Query 048013
Match_columns 216
No_of_seqs 125 out of 1407
Neff 9.7
Searched_HMMs 46136
Date Fri Mar 29 05:27:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048013.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/048013hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0024 Sorbitol dehydrogenase 100.0 1.8E-41 3.9E-46 264.9 21.3 213 1-214 75-288 (354)
2 COG1064 AdhP Zn-dependent alco 100.0 1.1E-40 2.4E-45 266.9 18.7 202 1-214 71-276 (339)
3 TIGR03366 HpnZ_proposed putati 100.0 1.2E-34 2.6E-39 232.5 23.4 209 1-215 12-236 (280)
4 PRK09880 L-idonate 5-dehydroge 100.0 4E-34 8.7E-39 235.6 22.4 203 5-214 75-281 (343)
5 COG1063 Tdh Threonine dehydrog 100.0 5.2E-34 1.1E-38 234.9 22.9 210 1-215 69-286 (350)
6 COG1062 AdhC Zn-dependent alco 100.0 6.2E-34 1.3E-38 224.5 19.3 208 1-212 69-298 (366)
7 cd08239 THR_DH_like L-threonin 100.0 2E-32 4.4E-37 225.1 23.6 197 1-203 68-266 (339)
8 KOG0023 Alcohol dehydrogenase, 100.0 1.3E-33 2.7E-38 220.6 14.2 208 1-215 79-295 (360)
9 KOG0022 Alcohol dehydrogenase, 100.0 1.1E-32 2.4E-37 214.5 18.7 209 1-212 75-307 (375)
10 PLN02740 Alcohol dehydrogenase 100.0 3.9E-32 8.4E-37 226.8 22.6 201 1-204 79-305 (381)
11 TIGR02818 adh_III_F_hyde S-(hy 100.0 7.1E-32 1.5E-36 224.2 23.8 199 1-202 69-290 (368)
12 cd08281 liver_ADH_like1 Zinc-d 100.0 1.2E-31 2.5E-36 223.2 23.7 208 1-213 75-306 (371)
13 PRK10309 galactitol-1-phosphat 100.0 1.4E-31 2.9E-36 220.9 23.5 201 1-207 67-268 (347)
14 PLN02827 Alcohol dehydrogenase 100.0 2.3E-31 5E-36 221.8 24.1 204 1-207 77-303 (378)
15 TIGR03451 mycoS_dep_FDH mycoth 100.0 2.2E-31 4.8E-36 220.5 23.3 209 1-213 68-292 (358)
16 TIGR03201 dearomat_had 6-hydro 100.0 4.3E-31 9.4E-36 218.1 23.1 208 1-213 67-286 (349)
17 cd08300 alcohol_DH_class_III c 100.0 6E-31 1.3E-35 218.7 23.3 199 1-202 70-291 (368)
18 cd08301 alcohol_DH_plants Plan 100.0 1.3E-30 2.8E-35 216.8 23.6 200 1-203 70-293 (369)
19 cd08233 butanediol_DH_like (2R 100.0 1.9E-30 4.1E-35 214.4 23.9 209 1-213 78-286 (351)
20 TIGR02819 fdhA_non_GSH formald 100.0 1.6E-30 3.5E-35 217.5 22.3 197 1-201 75-301 (393)
21 PLN02586 probable cinnamyl alc 100.0 2.2E-30 4.8E-35 214.6 22.0 203 1-214 80-293 (360)
22 cd08277 liver_alcohol_DH_like 100.0 4.7E-30 1E-34 213.1 23.7 206 1-209 69-297 (365)
23 PLN02702 L-idonate 5-dehydroge 100.0 8E-30 1.7E-34 211.6 24.4 202 2-203 88-289 (364)
24 PLN02178 cinnamyl-alcohol dehy 100.0 9.7E-30 2.1E-34 211.7 22.4 203 1-214 74-288 (375)
25 COG0604 Qor NADPH:quinone redu 100.0 5E-30 1.1E-34 208.9 20.1 182 1-213 71-257 (326)
26 TIGR02822 adh_fam_2 zinc-bindi 100.0 9.6E-30 2.1E-34 208.4 21.3 197 1-213 70-269 (329)
27 cd08230 glucose_DH Glucose deh 100.0 1.6E-29 3.4E-34 209.2 21.9 191 1-203 71-273 (355)
28 cd08231 MDR_TM0436_like Hypoth 100.0 2E-28 4.4E-33 203.0 23.9 200 1-202 68-283 (361)
29 cd05285 sorbitol_DH Sorbitol d 100.0 1.8E-28 4E-33 201.9 23.3 205 1-209 68-275 (343)
30 PRK10083 putative oxidoreducta 100.0 1.3E-28 2.9E-33 202.3 22.3 195 2-203 68-263 (339)
31 cd08299 alcohol_DH_class_I_II_ 100.0 3.4E-28 7.3E-33 202.5 23.3 200 1-203 74-296 (373)
32 cd08265 Zn_ADH3 Alcohol dehydr 100.0 6.6E-28 1.4E-32 201.5 23.2 205 1-208 101-316 (384)
33 cd05279 Zn_ADH1 Liver alcohol 100.0 1.4E-27 3.1E-32 198.3 23.2 199 1-202 67-288 (365)
34 cd08285 NADP_ADH NADP(H)-depen 100.0 1.6E-27 3.5E-32 196.9 23.0 198 1-203 67-270 (351)
35 cd08237 ribitol-5-phosphate_DH 100.0 3.2E-28 6.8E-33 200.4 18.4 189 7-214 76-271 (341)
36 KOG1197 Predicted quinone oxid 100.0 2.7E-28 5.8E-33 185.1 16.0 176 1-210 78-257 (336)
37 cd08256 Zn_ADH2 Alcohol dehydr 100.0 3.7E-27 8E-32 194.6 24.2 203 2-208 77-283 (350)
38 cd08296 CAD_like Cinnamyl alco 100.0 2.3E-27 5E-32 194.7 22.6 201 2-211 69-271 (333)
39 PLN02514 cinnamyl-alcohol dehy 100.0 1.8E-27 3.9E-32 197.1 22.1 203 1-214 77-290 (357)
40 cd08246 crotonyl_coA_red croto 100.0 2.5E-27 5.3E-32 198.6 22.4 198 1-202 95-318 (393)
41 cd05284 arabinose_DH_like D-ar 100.0 4.3E-27 9.3E-32 193.4 23.1 194 2-202 72-269 (340)
42 PRK05396 tdh L-threonine 3-deh 100.0 6.6E-27 1.4E-31 192.5 22.5 204 1-210 71-274 (341)
43 cd08278 benzyl_alcohol_DH Benz 100.0 1E-26 2.3E-31 193.1 23.3 206 1-212 69-300 (365)
44 cd08283 FDH_like_1 Glutathione 100.0 2.7E-26 5.9E-31 191.9 23.9 200 1-203 68-310 (386)
45 TIGR01751 crot-CoA-red crotony 100.0 1.5E-26 3.3E-31 194.2 22.2 198 2-203 92-314 (398)
46 cd08284 FDH_like_2 Glutathione 100.0 3E-26 6.5E-31 188.6 23.5 197 1-202 67-269 (344)
47 cd08232 idonate-5-DH L-idonate 100.0 2.4E-26 5.2E-31 188.9 22.6 201 2-209 68-272 (339)
48 cd08235 iditol_2_DH_like L-idi 100.0 5.4E-26 1.2E-30 187.0 24.1 196 2-202 68-268 (343)
49 cd08260 Zn_ADH6 Alcohol dehydr 100.0 4.4E-26 9.6E-31 187.8 23.5 196 2-203 69-268 (345)
50 cd08286 FDH_like_ADH2 formalde 100.0 5.6E-26 1.2E-30 187.2 23.5 206 2-211 69-278 (345)
51 cd08261 Zn_ADH7 Alcohol dehydr 100.0 7.5E-26 1.6E-30 185.9 23.6 200 2-208 68-267 (337)
52 cd05278 FDH_like Formaldehyde 100.0 4E-26 8.6E-31 188.0 21.8 198 2-203 69-271 (347)
53 cd08287 FDH_like_ADH3 formalde 99.9 1E-25 2.2E-30 185.6 23.8 204 1-209 67-278 (345)
54 TIGR00692 tdh L-threonine 3-de 99.9 9.4E-26 2E-30 185.6 22.3 200 2-207 70-269 (340)
55 cd08254 hydroxyacyl_CoA_DH 6-h 99.9 1.3E-25 2.8E-30 184.2 22.9 202 2-210 71-274 (338)
56 cd08236 sugar_DH NAD(P)-depend 99.9 1.2E-25 2.6E-30 185.0 22.7 197 2-204 67-263 (343)
57 cd08240 6_hydroxyhexanoate_dh_ 99.9 1.5E-25 3.2E-30 185.1 22.6 197 1-203 80-278 (350)
58 cd08279 Zn_ADH_class_III Class 99.9 1.8E-25 3.8E-30 185.6 22.9 197 2-202 68-285 (363)
59 cd08242 MDR_like Medium chain 99.9 1.8E-25 4E-30 182.2 21.2 190 9-212 69-258 (319)
60 cd08264 Zn_ADH_like2 Alcohol d 99.9 2.1E-25 4.6E-30 182.2 20.8 195 2-211 69-266 (325)
61 cd08262 Zn_ADH8 Alcohol dehydr 99.9 5E-25 1.1E-29 181.2 23.1 188 1-202 77-267 (341)
62 cd05281 TDH Threonine dehydrog 99.9 3.8E-25 8.2E-30 182.1 22.2 195 2-203 72-266 (341)
63 PRK09422 ethanol-active dehydr 99.9 4.8E-25 1E-29 181.1 22.2 201 2-209 68-271 (338)
64 cd08258 Zn_ADH4 Alcohol dehydr 99.9 5.6E-25 1.2E-29 178.6 21.8 207 2-215 70-281 (306)
65 cd05283 CAD1 Cinnamyl alcohol 99.9 6.3E-25 1.4E-29 180.5 21.6 200 2-211 68-275 (337)
66 cd08263 Zn_ADH10 Alcohol dehyd 99.9 1.4E-24 3E-29 180.5 23.5 207 2-212 68-302 (367)
67 cd08297 CAD3 Cinnamyl alcohol 99.9 1.7E-24 3.6E-29 178.1 23.6 196 2-203 71-269 (341)
68 cd05188 MDR Medium chain reduc 99.9 1.5E-24 3.1E-29 172.2 22.1 191 2-203 44-236 (271)
69 cd08238 sorbose_phosphate_red 99.9 1.4E-24 3E-29 183.0 22.1 199 1-214 76-306 (410)
70 cd08234 threonine_DH_like L-th 99.9 2.2E-24 4.8E-29 176.8 22.7 194 2-202 67-260 (334)
71 TIGR01202 bchC 2-desacetyl-2-h 99.9 3.3E-25 7.2E-30 180.1 17.2 176 1-215 72-247 (308)
72 cd08282 PFDH_like Pseudomonas 99.9 3.9E-24 8.4E-29 178.3 23.5 196 1-202 67-288 (375)
73 KOG0025 Zn2+-binding dehydroge 99.9 5.7E-25 1.2E-29 169.7 16.9 182 1-215 91-280 (354)
74 PRK13771 putative alcohol dehy 99.9 1.6E-24 3.6E-29 177.6 19.6 188 2-202 69-258 (334)
75 cd08266 Zn_ADH_like1 Alcohol d 99.9 7.7E-24 1.7E-28 173.4 21.6 195 2-203 72-269 (342)
76 cd08298 CAD2 Cinnamyl alcohol 99.9 6.8E-24 1.5E-28 173.6 20.8 184 2-201 73-258 (329)
77 cd08259 Zn_ADH5 Alcohol dehydr 99.9 1.8E-23 3.8E-28 171.0 22.0 189 2-202 69-259 (332)
78 cd08245 CAD Cinnamyl alcohol d 99.9 2E-23 4.3E-28 170.9 21.8 189 2-201 68-258 (330)
79 PLN03154 putative allyl alcoho 99.9 1.9E-23 4.1E-28 172.5 20.5 164 2-202 89-261 (348)
80 cd08295 double_bond_reductase_ 99.9 3.9E-23 8.5E-28 169.9 20.4 164 2-202 84-254 (338)
81 cd08274 MDR9 Medium chain dehy 99.9 6.9E-23 1.5E-27 168.9 20.7 192 2-211 92-286 (350)
82 cd08293 PTGR2 Prostaglandin re 99.9 4.5E-23 9.8E-28 169.8 19.4 164 1-200 82-255 (345)
83 cd08292 ETR_like_2 2-enoyl thi 99.9 1.5E-22 3.2E-27 165.2 20.6 167 1-201 72-240 (324)
84 cd08291 ETR_like_1 2-enoyl thi 99.9 4.1E-22 8.8E-27 163.0 19.8 168 1-202 74-245 (324)
85 cd08294 leukotriene_B4_DH_like 99.9 9.1E-22 2E-26 160.9 20.0 158 5-200 74-242 (329)
86 COG2130 Putative NADP-dependen 99.9 4.9E-22 1.1E-26 154.8 17.2 161 5-203 87-253 (340)
87 TIGR02825 B4_12hDH leukotriene 99.9 9.7E-22 2.1E-26 160.8 19.1 146 50-201 86-239 (325)
88 cd08269 Zn_ADH9 Alcohol dehydr 99.9 2.9E-21 6.3E-26 156.7 21.0 166 2-202 66-232 (312)
89 TIGR02817 adh_fam_1 zinc-bindi 99.9 3.6E-21 7.8E-26 157.9 20.0 167 1-199 72-247 (336)
90 KOG1198 Zinc-binding oxidoredu 99.9 6.6E-22 1.4E-26 161.8 14.5 147 47-200 101-256 (347)
91 cd08244 MDR_enoyl_red Possible 99.9 1E-20 2.2E-25 154.2 20.4 169 2-202 74-244 (324)
92 PTZ00354 alcohol dehydrogenase 99.9 9.6E-21 2.1E-25 154.9 20.3 169 1-202 72-243 (334)
93 cd08276 MDR7 Medium chain dehy 99.9 2.5E-20 5.5E-25 152.5 21.8 189 2-202 72-262 (336)
94 cd05282 ETR_like 2-enoyl thioe 99.9 1.3E-20 2.7E-25 153.6 19.7 168 2-203 71-241 (323)
95 cd08255 2-desacetyl-2-hydroxye 99.9 1.2E-20 2.7E-25 150.8 18.2 160 1-203 34-194 (277)
96 cd08290 ETR 2-enoyl thioester 99.9 2.5E-20 5.3E-25 153.3 18.9 168 2-201 78-253 (341)
97 PRK10754 quinone oxidoreductas 99.9 4.7E-20 1E-24 150.8 19.0 168 2-202 72-242 (327)
98 cd08251 polyketide_synthase po 99.9 8.3E-20 1.8E-24 147.1 18.9 168 2-201 52-221 (303)
99 cd08249 enoyl_reductase_like e 99.9 1E-19 2.2E-24 149.7 18.9 174 2-202 69-257 (339)
100 cd08289 MDR_yhfp_like Yhfp put 99.8 1.6E-19 3.5E-24 147.5 19.6 167 6-202 74-246 (326)
101 cd08270 MDR4 Medium chain dehy 99.8 1.6E-19 3.5E-24 146.0 19.0 167 2-211 66-235 (305)
102 cd08250 Mgc45594_like Mgc45594 99.8 1.9E-19 4E-24 147.3 19.2 164 2-202 75-240 (329)
103 cd08252 AL_MDR Arginate lyase 99.8 4.2E-19 9.1E-24 145.6 20.9 168 2-201 74-250 (336)
104 cd08243 quinone_oxidoreductase 99.8 2.1E-19 4.5E-24 146.0 18.9 164 7-201 74-240 (320)
105 smart00829 PKS_ER Enoylreducta 99.8 2.9E-19 6.4E-24 142.6 19.3 165 2-201 38-207 (288)
106 cd08253 zeta_crystallin Zeta-c 99.8 6.6E-19 1.4E-23 143.0 20.1 172 2-202 72-246 (325)
107 cd05286 QOR2 Quinone oxidoredu 99.8 4.8E-19 1E-23 143.4 19.2 167 2-202 69-238 (320)
108 cd05276 p53_inducible_oxidored 99.8 7E-19 1.5E-23 142.6 19.6 167 2-202 72-241 (323)
109 cd05195 enoyl_red enoyl reduct 99.8 6.5E-19 1.4E-23 140.7 19.1 166 2-202 42-212 (293)
110 TIGR02823 oxido_YhdH putative 99.8 7.1E-19 1.5E-23 143.6 19.6 167 5-202 72-244 (323)
111 cd05280 MDR_yhdh_yhfp Yhdh and 99.8 8.6E-19 1.9E-23 143.0 19.0 167 6-202 74-246 (325)
112 cd05288 PGDH Prostaglandin deh 99.8 1.3E-18 2.8E-23 142.3 18.9 146 50-202 94-247 (329)
113 cd08248 RTN4I1 Human Reticulon 99.8 1.4E-18 3.1E-23 143.3 19.2 165 2-201 88-259 (350)
114 TIGR02824 quinone_pig3 putativ 99.8 2.3E-18 4.9E-23 139.9 19.8 167 2-202 72-241 (325)
115 cd08247 AST1_like AST1 is a cy 99.8 2.8E-18 6.1E-23 141.8 20.6 173 2-199 73-259 (352)
116 KOG1196 Predicted NAD-dependen 99.8 9.4E-19 2E-23 136.2 16.4 147 51-203 102-257 (343)
117 cd08268 MDR2 Medium chain dehy 99.8 8.4E-18 1.8E-22 136.7 20.1 172 2-202 72-246 (328)
118 cd08241 QOR1 Quinone oxidoredu 99.8 8.8E-18 1.9E-22 136.3 19.3 168 2-203 72-242 (323)
119 cd08272 MDR6 Medium chain dehy 99.8 6.7E-18 1.5E-22 137.3 18.1 169 2-201 72-243 (326)
120 cd08273 MDR8 Medium chain dehy 99.8 1.5E-17 3.4E-22 136.0 18.4 163 2-203 72-237 (331)
121 cd08288 MDR_yhdh Yhdh putative 99.8 4.7E-17 1E-21 132.8 20.2 166 5-201 73-244 (324)
122 cd08271 MDR5 Medium chain dehy 99.8 4.3E-17 9.3E-22 132.7 19.9 168 2-201 71-241 (325)
123 cd08267 MDR1 Medium chain dehy 99.8 2.7E-17 5.9E-22 133.5 18.0 168 1-202 72-243 (319)
124 cd05289 MDR_like_2 alcohol deh 99.8 6.3E-17 1.4E-21 130.5 17.4 165 2-202 74-241 (309)
125 cd08275 MDR3 Medium chain dehy 99.8 1.3E-16 2.8E-21 130.6 19.2 165 2-202 71-239 (337)
126 PF00107 ADH_zinc_N: Zinc-bind 99.7 1.4E-15 3E-20 108.2 11.4 105 106-215 1-106 (130)
127 KOG1202 Animal-type fatty acid 99.6 2.6E-15 5.6E-20 134.0 10.4 160 50-213 1505-1671(2376)
128 PRK09424 pntA NAD(P) transhydr 99.4 1.7E-11 3.6E-16 104.8 13.7 108 93-201 162-287 (509)
129 PF08240 ADH_N: Alcohol dehydr 99.3 3.1E-12 6.7E-17 88.3 3.0 65 1-66 45-109 (109)
130 cd00401 AdoHcyase S-adenosyl-L 99.1 2.1E-09 4.6E-14 89.9 12.8 111 85-214 189-302 (413)
131 TIGR00561 pntA NAD(P) transhyd 98.9 2.3E-08 5E-13 85.6 12.4 108 94-203 162-288 (511)
132 PRK00517 prmA ribosomal protei 98.8 2.8E-07 6E-12 72.9 14.7 133 51-203 78-217 (250)
133 PRK05476 S-adenosyl-L-homocyst 98.7 2.3E-07 4.9E-12 78.1 12.9 104 84-204 198-304 (425)
134 cd05213 NAD_bind_Glutamyl_tRNA 98.7 7E-08 1.5E-12 78.6 8.0 108 61-181 139-251 (311)
135 PRK08306 dipicolinate synthase 98.7 4.8E-07 1E-11 73.2 12.6 99 95-207 151-249 (296)
136 TIGR01035 hemA glutamyl-tRNA r 98.6 2.4E-08 5.2E-13 84.5 3.3 162 14-202 108-280 (417)
137 TIGR00936 ahcY adenosylhomocys 98.5 1.8E-06 3.8E-11 72.4 11.7 92 93-201 192-284 (406)
138 PLN02494 adenosylhomocysteinas 98.5 2.2E-06 4.7E-11 72.6 12.0 92 94-202 252-344 (477)
139 COG2518 Pcm Protein-L-isoaspar 98.5 2.3E-06 5E-11 64.8 10.6 105 83-198 60-168 (209)
140 TIGR02853 spore_dpaA dipicolin 98.5 2.6E-06 5.7E-11 68.5 11.3 118 76-207 126-248 (287)
141 COG4221 Short-chain alcohol de 98.4 8.9E-06 1.9E-10 62.9 13.2 115 95-212 5-152 (246)
142 TIGR00518 alaDH alanine dehydr 98.4 3.5E-06 7.5E-11 70.3 10.9 99 95-203 166-271 (370)
143 COG2230 Cfa Cyclopropane fatty 98.4 3.9E-06 8.4E-11 66.6 10.2 116 88-216 65-194 (283)
144 PRK08324 short chain dehydroge 98.4 6.1E-06 1.3E-10 74.3 12.8 142 50-202 385-560 (681)
145 COG2264 PrmA Ribosomal protein 98.4 7.2E-06 1.6E-10 65.7 11.2 141 51-203 120-267 (300)
146 TIGR00406 prmA ribosomal prote 98.3 7.6E-06 1.7E-10 66.0 11.0 129 61-202 127-262 (288)
147 PRK00045 hemA glutamyl-tRNA re 98.3 2.5E-06 5.3E-11 72.5 8.1 101 67-180 149-254 (423)
148 COG0300 DltE Short-chain dehyd 98.3 3E-05 6.4E-10 61.3 13.5 118 94-212 4-155 (265)
149 KOG1209 1-Acyl dihydroxyaceton 98.3 1.9E-05 4E-10 59.8 11.5 117 95-213 6-152 (289)
150 PF06325 PrmA: Ribosomal prote 98.3 5.1E-06 1.1E-10 66.9 8.8 138 51-203 119-263 (295)
151 PRK05993 short chain dehydroge 98.3 2.5E-05 5.5E-10 62.5 12.8 107 95-203 3-138 (277)
152 PRK11873 arsM arsenite S-adeno 98.2 1.3E-05 2.9E-10 64.0 10.4 103 90-201 72-185 (272)
153 PF01488 Shikimate_DH: Shikima 98.2 7.3E-06 1.6E-10 58.6 7.9 98 93-202 9-112 (135)
154 COG2242 CobL Precorrin-6B meth 98.2 2.2E-05 4.7E-10 58.4 9.9 103 89-200 28-136 (187)
155 PRK06182 short chain dehydroge 98.2 7.6E-05 1.6E-09 59.5 13.9 81 95-178 2-84 (273)
156 COG2227 UbiG 2-polyprenyl-3-me 98.1 3.4E-05 7.3E-10 59.5 9.6 98 94-199 58-161 (243)
157 PRK12771 putative glutamate sy 98.1 3.5E-06 7.6E-11 74.2 4.7 80 92-179 133-233 (564)
158 PTZ00075 Adenosylhomocysteinas 98.1 2.3E-05 5E-10 66.6 9.3 93 93-202 251-344 (476)
159 KOG1205 Predicted dehydrogenas 98.1 0.00019 4E-09 57.3 13.5 116 95-212 11-162 (282)
160 PRK05693 short chain dehydroge 98.1 0.00025 5.4E-09 56.6 14.3 79 97-178 2-82 (274)
161 PRK00377 cbiT cobalt-precorrin 98.1 0.00015 3.3E-09 55.2 12.5 103 88-198 33-144 (198)
162 PRK11705 cyclopropane fatty ac 98.0 0.00011 2.4E-09 61.6 11.7 104 85-200 156-268 (383)
163 PRK05786 fabG 3-ketoacyl-(acyl 98.0 0.00034 7.3E-09 54.4 13.9 106 95-202 4-138 (238)
164 COG3967 DltE Short-chain dehyd 97.9 0.00053 1.1E-08 51.8 12.5 106 95-203 4-142 (245)
165 COG0373 HemA Glutamyl-tRNA red 97.9 0.00025 5.3E-09 59.5 11.7 96 94-202 176-277 (414)
166 PRK13943 protein-L-isoaspartat 97.9 0.00027 5.9E-09 57.8 11.8 103 87-198 72-179 (322)
167 PRK06139 short chain dehydroge 97.9 0.00063 1.4E-08 56.0 14.0 82 95-178 6-94 (330)
168 PRK13942 protein-L-isoaspartat 97.9 0.00046 1E-08 53.2 12.2 103 87-198 68-175 (212)
169 TIGR02469 CbiT precorrin-6Y C5 97.9 0.00049 1.1E-08 47.8 11.3 103 89-199 13-122 (124)
170 PF01135 PCMT: Protein-L-isoas 97.8 7.9E-05 1.7E-09 57.2 7.4 105 86-199 63-173 (209)
171 PRK06505 enoyl-(acyl carrier p 97.8 0.00097 2.1E-08 53.3 13.9 107 95-203 6-149 (271)
172 PF02826 2-Hacid_dh_C: D-isome 97.8 0.00018 3.9E-09 53.9 8.6 89 94-199 34-127 (178)
173 PF12847 Methyltransf_18: Meth 97.8 0.00023 5E-09 48.7 8.4 93 95-197 1-109 (112)
174 PRK12742 oxidoreductase; Provi 97.8 0.0011 2.3E-08 51.5 13.2 102 95-202 5-134 (237)
175 COG1748 LYS9 Saccharopine dehy 97.8 0.00047 1E-08 57.5 11.4 99 97-204 2-104 (389)
176 PRK08339 short chain dehydroge 97.8 0.0015 3.3E-08 51.8 13.8 106 95-203 7-147 (263)
177 PRK07109 short chain dehydroge 97.8 0.0017 3.7E-08 53.5 14.5 107 95-203 7-147 (334)
178 TIGR00080 pimt protein-L-isoas 97.7 0.00055 1.2E-08 52.8 10.9 104 86-198 68-176 (215)
179 PRK07825 short chain dehydroge 97.7 0.0015 3.3E-08 51.9 13.9 81 96-178 5-88 (273)
180 PRK08415 enoyl-(acyl carrier p 97.7 0.0022 4.7E-08 51.4 14.5 106 95-202 4-146 (274)
181 PRK07326 short chain dehydroge 97.7 0.0018 3.9E-08 50.3 13.6 82 95-178 5-92 (237)
182 PF00670 AdoHcyase_NAD: S-aden 97.7 0.00066 1.4E-08 49.6 10.2 96 93-205 20-116 (162)
183 PF13460 NAD_binding_10: NADH( 97.7 0.00089 1.9E-08 49.9 11.3 91 99-200 1-98 (183)
184 PRK08261 fabG 3-ketoacyl-(acyl 97.7 0.0014 3.1E-08 56.2 13.9 81 95-178 209-294 (450)
185 PRK12939 short chain dehydroge 97.7 0.002 4.4E-08 50.3 13.7 82 95-178 6-94 (250)
186 PRK05872 short chain dehydroge 97.7 0.0017 3.7E-08 52.5 13.6 81 95-178 8-95 (296)
187 PRK08017 oxidoreductase; Provi 97.7 0.00053 1.1E-08 53.9 10.2 80 97-178 3-84 (256)
188 PRK08265 short chain dehydroge 97.7 0.0018 3.8E-08 51.3 13.3 106 95-202 5-139 (261)
189 PRK12828 short chain dehydroge 97.7 0.0019 4.2E-08 50.0 13.2 81 95-178 6-92 (239)
190 PRK08267 short chain dehydroge 97.7 0.0015 3.2E-08 51.6 12.7 81 97-178 2-87 (260)
191 KOG1201 Hydroxysteroid 17-beta 97.7 0.001 2.2E-08 53.1 11.5 108 94-204 36-177 (300)
192 PRK07814 short chain dehydroge 97.7 0.0026 5.6E-08 50.4 14.1 82 95-178 9-97 (263)
193 PRK06463 fabG 3-ketoacyl-(acyl 97.7 0.0023 4.9E-08 50.4 13.7 104 95-201 6-139 (255)
194 PF01262 AlaDh_PNT_C: Alanine 97.7 0.00011 2.4E-09 54.5 5.7 103 95-202 19-142 (168)
195 PRK08177 short chain dehydroge 97.7 0.0018 3.8E-08 50.1 12.7 78 97-178 2-81 (225)
196 PF00106 adh_short: short chai 97.7 0.0018 3.8E-08 47.4 12.1 80 97-178 1-90 (167)
197 PF02353 CMAS: Mycolic acid cy 97.6 0.00017 3.7E-09 57.7 6.9 102 87-200 54-167 (273)
198 PRK07576 short chain dehydroge 97.6 0.0033 7.2E-08 49.9 14.3 106 95-202 8-146 (264)
199 PRK07533 enoyl-(acyl carrier p 97.6 0.0031 6.8E-08 49.9 14.1 106 95-202 9-151 (258)
200 PRK06603 enoyl-(acyl carrier p 97.6 0.0025 5.5E-08 50.5 13.5 106 95-202 7-149 (260)
201 PRK06500 short chain dehydroge 97.6 0.0029 6.3E-08 49.4 13.7 82 95-178 5-90 (249)
202 PRK06484 short chain dehydroge 97.6 0.002 4.2E-08 56.3 13.9 107 95-203 268-404 (520)
203 PRK06079 enoyl-(acyl carrier p 97.6 0.0021 4.5E-08 50.7 12.8 107 95-203 6-147 (252)
204 PRK14967 putative methyltransf 97.6 0.00048 1E-08 53.4 9.0 100 88-199 29-159 (223)
205 PRK13944 protein-L-isoaspartat 97.6 0.00042 9.1E-09 53.1 8.4 102 88-198 65-172 (205)
206 PRK09072 short chain dehydroge 97.6 0.0017 3.7E-08 51.3 12.2 81 95-178 4-90 (263)
207 PRK12829 short chain dehydroge 97.6 0.0025 5.4E-08 50.3 13.0 84 93-178 8-96 (264)
208 TIGR00438 rrmJ cell division p 97.6 0.0023 5E-08 48.2 12.1 103 91-201 28-148 (188)
209 COG0686 Ald Alanine dehydrogen 97.6 0.00043 9.4E-09 55.4 8.2 98 97-203 169-272 (371)
210 PRK00107 gidB 16S rRNA methylt 97.6 0.0011 2.4E-08 50.0 10.0 96 93-198 43-144 (187)
211 PRK07231 fabG 3-ketoacyl-(acyl 97.6 0.0051 1.1E-07 48.0 14.3 82 95-178 4-91 (251)
212 PLN03209 translocon at the inn 97.6 0.0021 4.6E-08 56.3 12.8 47 89-136 73-120 (576)
213 PRK13940 glutamyl-tRNA reducta 97.6 0.00076 1.7E-08 57.1 9.8 97 93-202 178-276 (414)
214 PRK06398 aldose dehydrogenase; 97.6 0.0019 4.1E-08 51.1 11.6 100 95-202 5-133 (258)
215 PRK06180 short chain dehydroge 97.5 0.0043 9.4E-08 49.5 13.8 82 95-178 3-88 (277)
216 PRK07062 short chain dehydroge 97.5 0.0055 1.2E-07 48.5 14.3 82 95-178 7-97 (265)
217 PRK08159 enoyl-(acyl carrier p 97.5 0.004 8.7E-08 49.7 13.4 107 94-202 8-151 (272)
218 PRK08589 short chain dehydroge 97.5 0.0048 1.1E-07 49.1 13.9 82 95-178 5-92 (272)
219 COG2226 UbiE Methylase involve 97.5 0.0027 5.8E-08 49.6 11.9 107 89-204 45-161 (238)
220 TIGR02356 adenyl_thiF thiazole 97.5 0.0031 6.6E-08 48.2 12.1 35 95-129 20-54 (202)
221 PRK07523 gluconate 5-dehydroge 97.5 0.0037 8E-08 49.2 12.9 82 95-178 9-97 (255)
222 PRK07984 enoyl-(acyl carrier p 97.5 0.0049 1.1E-07 49.0 13.6 81 95-177 5-93 (262)
223 PRK07806 short chain dehydroge 97.5 0.0045 9.8E-08 48.4 13.3 104 95-200 5-135 (248)
224 PRK06057 short chain dehydroge 97.5 0.0015 3.3E-08 51.4 10.6 81 95-178 6-89 (255)
225 PRK07402 precorrin-6B methylas 97.5 0.0055 1.2E-07 46.5 13.1 104 89-200 34-143 (196)
226 PRK08618 ornithine cyclodeamin 97.5 0.0035 7.5E-08 51.6 12.8 100 89-203 120-225 (325)
227 PRK09242 tropinone reductase; 97.5 0.0088 1.9E-07 47.1 14.8 82 95-178 8-98 (257)
228 PRK08085 gluconate 5-dehydroge 97.5 0.0083 1.8E-07 47.1 14.6 82 95-178 8-96 (254)
229 cd01065 NAD_bind_Shikimate_DH 97.5 0.0012 2.6E-08 47.9 9.0 105 86-202 8-119 (155)
230 PRK08594 enoyl-(acyl carrier p 97.5 0.0038 8.3E-08 49.4 12.5 107 95-203 6-151 (257)
231 PRK00811 spermidine synthase; 97.5 0.00092 2E-08 53.8 9.0 98 94-199 75-191 (283)
232 PRK07832 short chain dehydroge 97.5 0.0063 1.4E-07 48.4 13.8 79 97-178 1-88 (272)
233 PRK07502 cyclohexadienyl dehyd 97.5 0.0019 4E-08 52.7 10.9 91 97-200 7-101 (307)
234 PRK06179 short chain dehydroge 97.5 0.0034 7.5E-08 49.8 12.2 79 95-178 3-83 (270)
235 PRK06101 short chain dehydroge 97.5 0.0048 1E-07 48.1 12.7 41 97-138 2-43 (240)
236 PRK08643 acetoin reductase; Va 97.5 0.0075 1.6E-07 47.4 13.9 81 96-178 2-89 (256)
237 PRK07063 short chain dehydroge 97.4 0.007 1.5E-07 47.7 13.6 82 95-178 6-96 (260)
238 TIGR03325 BphB_TodD cis-2,3-di 97.4 0.0018 3.9E-08 51.3 10.2 81 95-177 4-88 (262)
239 cd05311 NAD_bind_2_malic_enz N 97.4 0.0043 9.4E-08 48.3 12.0 101 85-199 13-128 (226)
240 PRK10538 malonic semialdehyde 97.4 0.0069 1.5E-07 47.5 13.4 79 98-178 2-84 (248)
241 PRK08862 short chain dehydroge 97.4 0.0022 4.7E-08 49.9 10.4 82 95-177 4-92 (227)
242 PRK12481 2-deoxy-D-gluconate 3 97.4 0.0082 1.8E-07 47.2 13.8 82 95-178 7-93 (251)
243 PRK01581 speE spermidine synth 97.4 0.0053 1.1E-07 50.9 12.7 99 93-199 148-268 (374)
244 PRK07060 short chain dehydroge 97.4 0.0019 4.2E-08 50.3 10.0 78 95-178 8-87 (245)
245 PRK05884 short chain dehydroge 97.4 0.0068 1.5E-07 46.9 12.9 98 98-201 2-132 (223)
246 TIGR01809 Shik-DH-AROM shikima 97.4 0.0011 2.4E-08 53.3 8.7 75 95-178 124-200 (282)
247 PRK12823 benD 1,6-dihydroxycyc 97.4 0.0054 1.2E-07 48.3 12.6 80 95-177 7-93 (260)
248 PRK07856 short chain dehydroge 97.4 0.0052 1.1E-07 48.3 12.4 78 95-178 5-85 (252)
249 PRK04457 spermidine synthase; 97.4 0.0035 7.7E-08 49.9 11.3 97 94-198 65-176 (262)
250 PRK06949 short chain dehydroge 97.4 0.0026 5.6E-08 50.1 10.5 83 94-178 7-96 (258)
251 PRK05876 short chain dehydroge 97.4 0.0065 1.4E-07 48.6 12.9 82 95-178 5-93 (275)
252 PRK06198 short chain dehydroge 97.4 0.012 2.7E-07 46.2 14.4 83 95-178 5-94 (260)
253 PRK08642 fabG 3-ketoacyl-(acyl 97.4 0.01 2.3E-07 46.4 14.0 82 95-177 4-90 (253)
254 PRK09186 flagellin modificatio 97.4 0.0084 1.8E-07 47.0 13.4 81 95-177 3-92 (256)
255 PRK05866 short chain dehydroge 97.4 0.0032 7E-08 50.9 11.0 82 95-178 39-127 (293)
256 PRK06128 oxidoreductase; Provi 97.4 0.011 2.3E-07 47.9 14.0 106 95-202 54-194 (300)
257 TIGR01470 cysG_Nterm siroheme 97.3 0.0054 1.2E-07 47.0 11.4 92 95-199 8-100 (205)
258 PRK07774 short chain dehydroge 97.3 0.0027 5.9E-08 49.7 10.1 82 95-178 5-93 (250)
259 PRK12429 3-hydroxybutyrate deh 97.3 0.0082 1.8E-07 47.1 12.9 82 95-178 3-91 (258)
260 PRK12747 short chain dehydroge 97.3 0.01 2.2E-07 46.6 13.3 108 95-203 3-148 (252)
261 PRK06200 2,3-dihydroxy-2,3-dih 97.3 0.0037 8.1E-08 49.4 10.8 82 95-178 5-90 (263)
262 PRK08263 short chain dehydroge 97.3 0.011 2.3E-07 47.2 13.3 81 96-178 3-87 (275)
263 PRK07904 short chain dehydroge 97.3 0.0091 2E-07 47.1 12.7 83 93-178 5-97 (253)
264 PRK07370 enoyl-(acyl carrier p 97.3 0.013 2.8E-07 46.4 13.5 106 95-202 5-150 (258)
265 PRK06124 gluconate 5-dehydroge 97.3 0.022 4.8E-07 44.7 14.8 82 95-178 10-98 (256)
266 PRK13394 3-hydroxybutyrate deh 97.3 0.0089 1.9E-07 47.0 12.6 82 95-178 6-94 (262)
267 COG0421 SpeE Spermidine syntha 97.3 0.0039 8.4E-08 50.1 10.4 102 97-199 78-190 (282)
268 PRK08628 short chain dehydroge 97.3 0.0032 6.8E-08 49.6 10.0 82 95-178 6-93 (258)
269 PF03435 Saccharop_dh: Sacchar 97.3 0.0031 6.8E-08 53.0 10.4 93 99-198 1-97 (386)
270 PRK12743 oxidoreductase; Provi 97.3 0.014 3E-07 46.0 13.6 81 96-178 2-90 (256)
271 PLN02823 spermine synthase 97.3 0.0041 8.8E-08 51.3 10.7 101 94-199 102-220 (336)
272 PF03446 NAD_binding_2: NAD bi 97.3 0.0059 1.3E-07 44.9 10.7 44 97-141 2-45 (163)
273 PRK12937 short chain dehydroge 97.3 0.017 3.6E-07 45.0 13.8 106 95-202 4-142 (245)
274 PLN02366 spermidine synthase 97.3 0.0029 6.3E-08 51.5 9.7 101 93-199 89-206 (308)
275 PRK06484 short chain dehydroge 97.3 0.013 2.8E-07 51.2 14.4 82 95-178 4-89 (520)
276 PRK07831 short chain dehydroge 97.3 0.0046 9.9E-08 48.9 10.7 84 93-178 14-107 (262)
277 PRK07985 oxidoreductase; Provi 97.3 0.013 2.8E-07 47.4 13.5 106 95-202 48-188 (294)
278 PRK06701 short chain dehydroge 97.3 0.018 3.9E-07 46.4 14.3 107 94-202 44-184 (290)
279 PRK12384 sorbitol-6-phosphate 97.3 0.015 3.2E-07 45.8 13.5 81 96-178 2-91 (259)
280 PRK07067 sorbitol dehydrogenas 97.2 0.017 3.8E-07 45.4 13.8 82 95-178 5-90 (257)
281 PRK05653 fabG 3-ketoacyl-(acyl 97.2 0.02 4.2E-07 44.4 13.9 82 95-178 4-92 (246)
282 PRK06196 oxidoreductase; Provi 97.2 0.0047 1E-07 50.4 10.7 82 95-178 25-109 (315)
283 PRK06841 short chain dehydroge 97.2 0.0051 1.1E-07 48.3 10.6 82 95-178 14-99 (255)
284 PRK06935 2-deoxy-D-gluconate 3 97.2 0.016 3.5E-07 45.7 13.4 82 95-178 14-101 (258)
285 PRK05867 short chain dehydroge 97.2 0.005 1.1E-07 48.4 10.4 82 95-178 8-96 (253)
286 PRK08063 enoyl-(acyl carrier p 97.2 0.019 4.2E-07 44.8 13.7 82 95-178 3-92 (250)
287 TIGR01832 kduD 2-deoxy-D-gluco 97.2 0.0072 1.6E-07 47.2 11.2 82 95-178 4-90 (248)
288 TIGR00138 gidB 16S rRNA methyl 97.2 0.0041 9E-08 46.7 9.3 94 95-198 42-141 (181)
289 TIGR00417 speE spermidine synt 97.2 0.0041 8.9E-08 49.7 9.8 100 93-199 70-186 (270)
290 PRK07677 short chain dehydroge 97.2 0.0048 1E-07 48.5 10.1 81 96-178 1-88 (252)
291 PRK08217 fabG 3-ketoacyl-(acyl 97.2 0.0071 1.5E-07 47.2 11.0 81 95-177 4-91 (253)
292 PRK06953 short chain dehydroge 97.2 0.0041 8.9E-08 47.9 9.4 77 97-178 2-80 (222)
293 PF03807 F420_oxidored: NADP o 97.2 0.028 6E-07 37.2 12.4 85 98-198 1-93 (96)
294 PLN02780 ketoreductase/ oxidor 97.2 0.0042 9E-08 51.0 9.9 41 95-136 52-93 (320)
295 PRK08287 cobalt-precorrin-6Y C 97.2 0.014 3E-07 43.9 12.1 100 89-199 25-131 (187)
296 cd01075 NAD_bind_Leu_Phe_Val_D 97.2 0.0079 1.7E-07 45.9 10.8 47 94-141 26-73 (200)
297 PRK07024 short chain dehydroge 97.2 0.0051 1.1E-07 48.5 10.1 81 96-178 2-88 (257)
298 PRK07340 ornithine cyclodeamin 97.2 0.0043 9.3E-08 50.5 9.8 102 89-203 118-221 (304)
299 COG0169 AroE Shikimate 5-dehyd 97.2 0.0016 3.4E-08 52.3 7.0 47 94-140 124-171 (283)
300 PF01209 Ubie_methyltran: ubiE 97.2 0.0018 3.8E-08 50.7 7.2 107 89-204 41-158 (233)
301 PRK12938 acetyacetyl-CoA reduc 97.2 0.013 2.9E-07 45.7 12.2 82 95-178 2-91 (246)
302 PF11017 DUF2855: Protein of u 97.1 0.05 1.1E-06 44.2 15.3 140 50-203 89-235 (314)
303 PRK06523 short chain dehydroge 97.1 0.017 3.7E-07 45.4 12.8 76 95-177 8-86 (260)
304 PRK05650 short chain dehydroge 97.1 0.034 7.3E-07 44.2 14.5 79 98-178 2-87 (270)
305 PRK06125 short chain dehydroge 97.1 0.024 5.2E-07 44.7 13.6 79 95-178 6-91 (259)
306 PRK12746 short chain dehydroge 97.1 0.018 3.8E-07 45.2 12.8 83 95-178 5-100 (254)
307 PRK07453 protochlorophyllide o 97.1 0.0071 1.5E-07 49.5 10.7 81 95-177 5-92 (322)
308 PRK06940 short chain dehydroge 97.1 0.018 3.8E-07 46.1 12.8 101 97-201 3-127 (275)
309 PRK14103 trans-aconitate 2-met 97.1 0.011 2.4E-07 46.7 11.4 98 87-198 21-125 (255)
310 PLN02244 tocopherol O-methyltr 97.1 0.012 2.5E-07 48.8 11.9 97 94-200 117-224 (340)
311 PRK07478 short chain dehydroge 97.1 0.0085 1.8E-07 47.1 10.7 82 95-178 5-93 (254)
312 cd01483 E1_enzyme_family Super 97.1 0.017 3.8E-07 41.4 11.5 95 98-199 1-121 (143)
313 PRK04148 hypothetical protein; 97.1 0.008 1.7E-07 42.6 9.3 95 94-200 15-110 (134)
314 PLN02253 xanthoxin dehydrogena 97.1 0.0063 1.4E-07 48.6 10.1 82 95-178 17-104 (280)
315 PRK05855 short chain dehydroge 97.1 0.02 4.3E-07 50.5 14.0 82 95-178 314-402 (582)
316 PRK05854 short chain dehydroge 97.1 0.0083 1.8E-07 49.0 10.9 82 95-178 13-103 (313)
317 PRK04266 fibrillarin; Provisio 97.1 0.015 3.2E-07 45.3 11.7 104 89-198 66-175 (226)
318 PRK11036 putative S-adenosyl-L 97.1 0.0028 6.1E-08 50.2 7.9 95 94-198 43-148 (255)
319 PRK09291 short chain dehydroge 97.1 0.005 1.1E-07 48.4 9.3 75 96-177 2-82 (257)
320 PRK00536 speE spermidine synth 97.1 0.0027 5.9E-08 50.4 7.6 101 93-199 70-171 (262)
321 CHL00194 ycf39 Ycf39; Provisio 97.1 0.014 3E-07 47.7 12.1 94 98-200 2-110 (317)
322 KOG4169 15-hydroxyprostaglandi 97.1 0.012 2.6E-07 45.3 10.6 115 96-212 5-149 (261)
323 PRK07791 short chain dehydroge 97.1 0.033 7.2E-07 44.8 14.1 83 94-178 4-102 (286)
324 PRK08644 thiamine biosynthesis 97.1 0.015 3.2E-07 44.9 11.4 35 95-129 27-61 (212)
325 PRK08703 short chain dehydroge 97.1 0.0076 1.6E-07 46.9 10.0 83 95-178 5-97 (239)
326 PLN03139 formate dehydrogenase 97.1 0.0059 1.3E-07 51.2 9.8 89 95-199 198-291 (386)
327 PRK11207 tellurite resistance 97.1 0.01 2.2E-07 45.1 10.4 98 89-198 24-133 (197)
328 PRK08220 2,3-dihydroxybenzoate 97.1 0.022 4.7E-07 44.6 12.7 77 95-178 7-86 (252)
329 PRK01683 trans-aconitate 2-met 97.1 0.014 3E-07 46.2 11.6 99 88-198 24-129 (258)
330 KOG1210 Predicted 3-ketosphing 97.1 0.014 3E-07 47.0 11.3 111 91-203 28-175 (331)
331 PRK00312 pcm protein-L-isoaspa 97.1 0.0042 9E-08 47.7 8.3 100 88-198 71-174 (212)
332 PRK06194 hypothetical protein; 97.1 0.0099 2.1E-07 47.6 10.8 82 95-178 5-93 (287)
333 PLN03075 nicotianamine synthas 97.1 0.0081 1.8E-07 48.4 10.0 100 93-199 121-233 (296)
334 PRK07688 thiamine/molybdopteri 97.1 0.013 2.8E-07 48.4 11.6 35 95-129 23-57 (339)
335 cd01080 NAD_bind_m-THF_DH_Cycl 97.1 0.0078 1.7E-07 44.6 9.3 79 92-202 40-119 (168)
336 PRK15116 sulfur acceptor prote 97.1 0.041 9E-07 43.9 13.9 101 95-200 29-154 (268)
337 PLN00203 glutamyl-tRNA reducta 97.1 0.0076 1.6E-07 52.6 10.6 98 95-202 265-372 (519)
338 PRK07574 formate dehydrogenase 97.0 0.0066 1.4E-07 51.0 9.8 89 95-199 191-284 (385)
339 PRK12475 thiamine/molybdopteri 97.0 0.015 3.4E-07 48.0 11.9 36 95-130 23-58 (338)
340 COG2910 Putative NADH-flavin r 97.0 0.01 2.2E-07 44.2 9.5 94 98-202 2-107 (211)
341 PRK08340 glucose-1-dehydrogena 97.0 0.011 2.4E-07 46.6 10.7 79 98-178 2-86 (259)
342 PRK07454 short chain dehydroge 97.0 0.014 3E-07 45.5 11.1 83 94-178 4-93 (241)
343 TIGR01289 LPOR light-dependent 97.0 0.034 7.3E-07 45.4 13.8 81 96-178 3-91 (314)
344 COG2519 GCD14 tRNA(1-methylade 97.0 0.017 3.8E-07 45.2 11.2 102 89-199 88-195 (256)
345 PRK06482 short chain dehydroge 97.0 0.009 1.9E-07 47.6 10.2 80 97-178 3-86 (276)
346 PRK06172 short chain dehydroge 97.0 0.011 2.4E-07 46.4 10.6 82 95-178 6-94 (253)
347 COG4122 Predicted O-methyltran 97.0 0.019 4.1E-07 44.3 11.4 104 91-199 55-166 (219)
348 TIGR02355 moeB molybdopterin s 97.0 0.014 3.1E-07 45.8 11.0 35 96-130 24-58 (240)
349 PRK07577 short chain dehydroge 97.0 0.018 3.9E-07 44.5 11.6 75 95-178 2-78 (234)
350 PF13561 adh_short_C2: Enoyl-( 97.0 0.0088 1.9E-07 46.7 9.8 97 105-203 6-137 (241)
351 PF00899 ThiF: ThiF family; I 97.0 0.034 7.4E-07 39.5 12.0 96 96-198 2-122 (135)
352 KOG0725 Reductases with broad 97.0 0.0062 1.3E-07 48.7 9.0 84 94-178 6-99 (270)
353 PRK06483 dihydromonapterin red 97.0 0.012 2.7E-07 45.6 10.6 80 96-178 2-84 (236)
354 PLN02233 ubiquinone biosynthes 97.0 0.016 3.5E-07 46.1 11.3 106 89-203 67-186 (261)
355 PRK06077 fabG 3-ketoacyl-(acyl 97.0 0.062 1.4E-06 41.9 14.6 107 95-203 5-144 (252)
356 PRK08690 enoyl-(acyl carrier p 97.0 0.011 2.5E-07 46.8 10.5 82 95-178 5-94 (261)
357 PRK05717 oxidoreductase; Valid 97.0 0.013 2.8E-07 46.1 10.8 82 95-178 9-94 (255)
358 PRK08936 glucose-1-dehydrogena 97.0 0.052 1.1E-06 42.8 14.1 82 95-178 6-95 (261)
359 PRK05597 molybdopterin biosynt 97.0 0.016 3.4E-07 48.3 11.4 36 95-130 27-62 (355)
360 PRK08277 D-mannonate oxidoredu 97.0 0.012 2.7E-07 46.8 10.6 81 95-177 9-96 (278)
361 PRK06138 short chain dehydroge 97.0 0.013 2.8E-07 45.8 10.6 82 95-178 4-91 (252)
362 PLN02928 oxidoreductase family 97.0 0.0099 2.2E-07 49.3 10.2 95 95-199 158-262 (347)
363 TIGR00446 nop2p NOL1/NOP2/sun 97.0 0.035 7.5E-07 44.3 12.9 100 90-198 66-198 (264)
364 PRK06719 precorrin-2 dehydroge 97.0 0.018 3.8E-07 42.2 10.4 84 95-193 12-95 (157)
365 PRK07890 short chain dehydroge 97.0 0.013 2.8E-07 46.0 10.5 82 95-178 4-92 (258)
366 PRK08317 hypothetical protein; 97.0 0.024 5.2E-07 43.9 11.9 103 88-199 12-124 (241)
367 PRK13656 trans-2-enoyl-CoA red 97.0 0.048 1E-06 45.7 13.9 83 94-179 39-142 (398)
368 PRK05875 short chain dehydroge 97.0 0.014 3.1E-07 46.4 10.8 81 95-177 6-95 (276)
369 cd01078 NAD_bind_H4MPT_DH NADP 97.0 0.026 5.6E-07 42.7 11.7 100 94-202 26-132 (194)
370 PRK09730 putative NAD(P)-bindi 97.0 0.045 9.8E-07 42.5 13.4 80 97-178 2-89 (247)
371 TIGR00507 aroE shikimate 5-deh 96.9 0.0093 2E-07 47.7 9.6 97 93-202 114-217 (270)
372 TIGR03206 benzo_BadH 2-hydroxy 96.9 0.015 3.2E-07 45.4 10.7 81 95-177 2-89 (250)
373 PRK03369 murD UDP-N-acetylmura 96.9 0.0069 1.5E-07 52.6 9.5 73 93-179 9-81 (488)
374 PRK03612 spermidine synthase; 96.9 0.012 2.5E-07 51.6 10.9 98 94-199 296-415 (521)
375 PRK08993 2-deoxy-D-gluconate 3 96.9 0.011 2.5E-07 46.4 10.0 82 95-178 9-95 (253)
376 PRK08226 short chain dehydroge 96.9 0.016 3.4E-07 45.8 10.8 82 95-178 5-92 (263)
377 PRK05690 molybdopterin biosynt 96.9 0.023 4.9E-07 44.8 11.5 35 95-129 31-65 (245)
378 PF13241 NAD_binding_7: Putati 96.9 0.015 3.2E-07 39.3 9.2 91 95-204 6-96 (103)
379 PRK06718 precorrin-2 dehydroge 96.9 0.022 4.8E-07 43.5 11.1 90 95-199 9-100 (202)
380 PRK07074 short chain dehydroge 96.9 0.014 3E-07 45.9 10.4 81 96-178 2-87 (257)
381 cd01487 E1_ThiF_like E1_ThiF_l 96.9 0.017 3.6E-07 43.1 10.2 33 98-130 1-33 (174)
382 PRK00121 trmB tRNA (guanine-N( 96.9 0.02 4.3E-07 43.8 10.9 99 95-199 40-156 (202)
383 PLN02476 O-methyltransferase 96.9 0.021 4.6E-07 45.7 11.3 105 91-198 114-227 (278)
384 PRK07035 short chain dehydroge 96.9 0.016 3.4E-07 45.5 10.6 81 95-177 7-94 (252)
385 cd00755 YgdL_like Family of ac 96.9 0.025 5.5E-07 44.1 11.5 92 96-193 11-127 (231)
386 PRK07889 enoyl-(acyl carrier p 96.9 0.043 9.4E-07 43.3 13.1 104 95-200 6-146 (256)
387 PRK06171 sorbitol-6-phosphate 96.9 0.031 6.8E-07 44.1 12.3 78 95-178 8-87 (266)
388 PRK06914 short chain dehydroge 96.9 0.011 2.4E-07 47.1 9.8 80 96-178 3-91 (280)
389 PRK08328 hypothetical protein; 96.9 0.022 4.7E-07 44.5 11.1 35 95-129 26-60 (231)
390 PRK13243 glyoxylate reductase; 96.9 0.012 2.7E-07 48.5 10.1 87 95-199 149-240 (333)
391 PRK06181 short chain dehydroge 96.9 0.019 4.1E-07 45.3 10.9 81 96-178 1-88 (263)
392 PF02254 TrkA_N: TrkA-N domain 96.9 0.052 1.1E-06 37.2 11.8 93 99-199 1-96 (116)
393 PRK06141 ornithine cyclodeamin 96.9 0.033 7.2E-07 45.6 12.3 100 89-202 118-222 (314)
394 TIGR03840 TMPT_Se_Te thiopurin 96.9 0.022 4.9E-07 43.9 10.7 105 94-201 33-154 (213)
395 PTZ00098 phosphoethanolamine N 96.9 0.018 4E-07 45.8 10.5 105 86-200 43-157 (263)
396 PRK06197 short chain dehydroge 96.9 0.016 3.4E-07 47.0 10.4 105 95-201 15-153 (306)
397 PRK12749 quinate/shikimate deh 96.9 0.012 2.6E-07 47.5 9.5 36 95-130 123-158 (288)
398 TIGR02354 thiF_fam2 thiamine b 96.8 0.035 7.5E-07 42.4 11.6 35 95-129 20-54 (200)
399 PRK05565 fabG 3-ketoacyl-(acyl 96.8 0.045 9.7E-07 42.5 12.6 81 96-178 5-93 (247)
400 PRK08213 gluconate 5-dehydroge 96.8 0.02 4.3E-07 45.1 10.7 82 95-178 11-99 (259)
401 PRK14903 16S rRNA methyltransf 96.8 0.037 7.9E-07 47.4 12.8 102 89-198 231-365 (431)
402 COG2084 MmsB 3-hydroxyisobutyr 96.8 0.021 4.5E-07 45.9 10.5 90 98-203 2-99 (286)
403 PRK11188 rrmJ 23S rRNA methylt 96.8 0.028 6E-07 43.2 11.0 97 93-198 49-164 (209)
404 PRK12824 acetoacetyl-CoA reduc 96.8 0.06 1.3E-06 41.8 13.2 80 97-178 3-90 (245)
405 PLN02781 Probable caffeoyl-CoA 96.8 0.029 6.4E-07 43.9 11.3 104 91-197 64-176 (234)
406 PRK08251 short chain dehydroge 96.8 0.023 4.9E-07 44.4 10.8 80 96-177 2-90 (248)
407 TIGR00477 tehB tellurite resis 96.8 0.0072 1.6E-07 45.9 7.6 94 92-198 27-132 (195)
408 PRK05562 precorrin-2 dehydroge 96.8 0.041 9E-07 42.6 11.8 92 95-199 24-116 (223)
409 PF13602 ADH_zinc_N_2: Zinc-bi 96.8 0.00028 6E-09 49.5 -0.2 49 139-199 1-51 (127)
410 PLN00141 Tic62-NAD(P)-related 96.8 0.018 3.8E-07 45.4 10.0 101 95-201 16-133 (251)
411 PRK08945 putative oxoacyl-(acy 96.8 0.028 6.1E-07 43.9 11.1 84 93-178 9-102 (247)
412 KOG1014 17 beta-hydroxysteroid 96.8 0.065 1.4E-06 43.2 12.9 114 94-211 47-198 (312)
413 PRK07819 3-hydroxybutyryl-CoA 96.8 0.016 3.4E-07 46.8 9.8 38 97-135 6-43 (286)
414 TIGR02992 ectoine_eutC ectoine 96.8 0.032 7E-07 45.9 11.7 96 93-202 126-227 (326)
415 TIGR02752 MenG_heptapren 2-hep 96.8 0.039 8.4E-07 42.8 11.7 103 89-200 39-152 (231)
416 TIGR00563 rsmB ribosomal RNA s 96.8 0.031 6.7E-07 47.8 12.0 103 89-198 232-367 (426)
417 PRK12548 shikimate 5-dehydroge 96.8 0.015 3.3E-07 46.9 9.6 37 94-130 124-160 (289)
418 PLN02730 enoyl-[acyl-carrier-p 96.8 0.042 9.1E-07 44.7 12.2 36 95-132 8-46 (303)
419 PRK08264 short chain dehydroge 96.8 0.011 2.4E-07 45.8 8.7 77 95-178 5-83 (238)
420 PRK05557 fabG 3-ketoacyl-(acyl 96.8 0.11 2.4E-06 40.2 14.4 82 95-178 4-93 (248)
421 PRK06114 short chain dehydroge 96.8 0.024 5.2E-07 44.6 10.6 82 95-178 7-96 (254)
422 PRK08762 molybdopterin biosynt 96.8 0.027 5.9E-07 47.3 11.3 35 95-129 134-168 (376)
423 PRK12744 short chain dehydroge 96.7 0.057 1.2E-06 42.4 12.6 82 95-178 7-99 (257)
424 PRK07069 short chain dehydroge 96.7 0.044 9.5E-07 42.8 11.9 101 99-202 2-140 (251)
425 KOG1610 Corticosteroid 11-beta 96.7 0.06 1.3E-06 43.5 12.4 114 93-208 26-173 (322)
426 COG1179 Dinucleotide-utilizing 96.7 0.023 5.1E-07 44.1 9.7 100 95-200 29-154 (263)
427 PRK12550 shikimate 5-dehydroge 96.7 0.01 2.3E-07 47.5 8.1 54 86-139 112-166 (272)
428 PRK06720 hypothetical protein; 96.7 0.044 9.5E-07 40.6 11.0 82 95-178 15-103 (169)
429 PRK07417 arogenate dehydrogena 96.7 0.018 3.9E-07 46.3 9.6 43 98-141 2-44 (279)
430 PRK15469 ghrA bifunctional gly 96.7 0.0079 1.7E-07 49.1 7.6 87 95-199 135-226 (312)
431 PRK06113 7-alpha-hydroxysteroi 96.7 0.031 6.6E-07 44.0 10.8 82 95-178 10-98 (255)
432 TIGR01505 tartro_sem_red 2-hyd 96.7 0.025 5.5E-07 45.6 10.5 43 98-141 1-43 (291)
433 cd00757 ThiF_MoeB_HesA_family 96.7 0.055 1.2E-06 42.1 12.0 34 96-129 21-54 (228)
434 PRK12936 3-ketoacyl-(acyl-carr 96.7 0.032 6.9E-07 43.3 10.8 82 95-178 5-90 (245)
435 KOG1270 Methyltransferases [Co 96.7 0.0057 1.2E-07 48.0 6.2 92 96-200 90-196 (282)
436 PRK07097 gluconate 5-dehydroge 96.7 0.033 7.1E-07 44.1 10.9 82 95-178 9-97 (265)
437 COG0569 TrkA K+ transport syst 96.7 0.026 5.6E-07 43.9 9.9 74 98-179 2-77 (225)
438 PF08241 Methyltransf_11: Meth 96.7 0.016 3.4E-07 37.8 7.6 86 100-197 1-95 (95)
439 PRK11559 garR tartronate semia 96.7 0.032 7E-07 45.1 10.8 86 98-199 4-96 (296)
440 TIGR01963 PHB_DH 3-hydroxybuty 96.6 0.032 7E-07 43.6 10.4 81 96-178 1-88 (255)
441 PRK07666 fabG 3-ketoacyl-(acyl 96.6 0.036 7.8E-07 43.0 10.6 82 95-178 6-94 (239)
442 PRK14901 16S rRNA methyltransf 96.6 0.036 7.8E-07 47.5 11.3 104 89-197 246-382 (434)
443 PF01596 Methyltransf_3: O-met 96.6 0.022 4.7E-07 43.7 9.0 104 93-199 43-155 (205)
444 PRK12826 3-ketoacyl-(acyl-carr 96.6 0.035 7.7E-07 43.2 10.6 82 95-178 5-93 (251)
445 PLN02657 3,8-divinyl protochlo 96.6 0.063 1.4E-06 45.3 12.6 104 94-201 58-183 (390)
446 PRK09134 short chain dehydroge 96.6 0.031 6.7E-07 44.0 10.2 82 95-178 8-97 (258)
447 PRK12809 putative oxidoreducta 96.6 0.015 3.2E-07 52.3 9.2 76 95-178 309-405 (639)
448 PRK08416 7-alpha-hydroxysteroi 96.6 0.042 9.1E-07 43.4 11.0 81 95-177 7-96 (260)
449 PRK12859 3-ketoacyl-(acyl-carr 96.6 0.16 3.5E-06 39.9 14.3 108 94-203 4-158 (256)
450 PRK10669 putative cation:proto 96.6 0.042 9.1E-07 48.6 11.9 94 97-198 418-514 (558)
451 KOG1208 Dehydrogenases with di 96.6 0.11 2.4E-06 42.5 13.4 107 94-202 33-173 (314)
452 PRK14618 NAD(P)H-dependent gly 96.6 0.032 6.9E-07 45.9 10.4 94 96-199 4-104 (328)
453 PRK14175 bifunctional 5,10-met 96.6 0.016 3.5E-07 46.6 8.3 84 87-202 148-233 (286)
454 PRK07775 short chain dehydroge 96.6 0.039 8.4E-07 44.0 10.7 82 95-178 9-97 (274)
455 TIGR01318 gltD_gamma_fam gluta 96.6 0.015 3.2E-07 50.3 8.8 77 95-179 140-237 (467)
456 PF07991 IlvN: Acetohydroxy ac 96.6 0.048 1E-06 39.9 9.9 87 95-198 3-94 (165)
457 TIGR00872 gnd_rel 6-phosphoglu 96.6 0.1 2.3E-06 42.3 13.2 43 98-141 2-44 (298)
458 TIGR02415 23BDH acetoin reduct 96.6 0.028 6.1E-07 44.0 9.6 80 97-178 1-87 (254)
459 KOG1207 Diacetyl reductase/L-x 96.5 0.011 2.3E-07 43.8 6.4 44 95-139 6-50 (245)
460 PRK06997 enoyl-(acyl carrier p 96.5 0.038 8.3E-07 43.7 10.4 106 95-202 5-148 (260)
461 PF01564 Spermine_synth: Sperm 96.5 0.013 2.8E-07 46.2 7.5 96 94-199 75-191 (246)
462 cd01492 Aos1_SUMO Ubiquitin ac 96.5 0.066 1.4E-06 40.7 11.2 93 95-193 20-135 (197)
463 PRK03562 glutathione-regulated 96.5 0.036 7.8E-07 49.7 11.1 95 96-198 400-497 (621)
464 PRK08303 short chain dehydroge 96.5 0.046 1E-06 44.5 11.0 81 95-177 7-105 (305)
465 PRK10258 biotin biosynthesis p 96.5 0.069 1.5E-06 42.0 11.7 101 89-202 36-143 (251)
466 PF13847 Methyltransf_31: Meth 96.5 0.027 5.8E-07 40.8 8.7 98 94-200 2-111 (152)
467 PRK11064 wecC UDP-N-acetyl-D-m 96.5 0.055 1.2E-06 46.1 11.5 97 97-200 4-120 (415)
468 PF10727 Rossmann-like: Rossma 96.5 0.0093 2E-07 42.0 5.8 80 96-192 10-91 (127)
469 COG0031 CysK Cysteine synthase 96.5 0.21 4.5E-06 40.4 14.1 60 87-146 53-114 (300)
470 PRK08278 short chain dehydroge 96.5 0.042 9E-07 43.8 10.3 82 95-178 5-100 (273)
471 PRK09599 6-phosphogluconate de 96.5 0.15 3.2E-06 41.5 13.6 43 98-141 2-44 (301)
472 PF02558 ApbA: Ketopantoate re 96.5 0.01 2.2E-07 42.8 6.2 93 99-198 1-100 (151)
473 PRK08223 hypothetical protein; 96.5 0.076 1.6E-06 42.7 11.5 36 95-130 26-61 (287)
474 PRK14192 bifunctional 5,10-met 96.5 0.018 3.9E-07 46.4 8.0 84 87-202 149-234 (283)
475 PRK14902 16S rRNA methyltransf 96.5 0.069 1.5E-06 45.9 12.1 102 89-198 244-378 (444)
476 PRK07424 bifunctional sterol d 96.5 0.028 6.2E-07 47.6 9.5 76 95-178 177-255 (406)
477 PRK07102 short chain dehydroge 96.5 0.035 7.7E-07 43.2 9.5 38 97-135 2-40 (243)
478 PRK06436 glycerate dehydrogena 96.4 0.017 3.7E-07 47.0 7.9 84 95-199 121-209 (303)
479 PRK05600 thiamine biosynthesis 96.4 0.078 1.7E-06 44.4 11.9 35 95-129 40-74 (370)
480 PRK06947 glucose-1-dehydrogena 96.4 0.039 8.4E-07 43.1 9.7 80 97-178 3-90 (248)
481 PRK07066 3-hydroxybutyryl-CoA 96.4 0.041 8.9E-07 45.1 9.9 38 97-135 8-45 (321)
482 PRK03659 glutathione-regulated 96.4 0.044 9.5E-07 48.9 10.9 95 97-199 401-498 (601)
483 PRK12367 short chain dehydroge 96.4 0.023 5.1E-07 44.7 8.3 75 95-178 13-89 (245)
484 PRK08291 ectoine utilization p 96.4 0.09 1.9E-06 43.4 12.0 96 93-202 129-230 (330)
485 COG1052 LdhA Lactate dehydroge 96.4 0.043 9.4E-07 45.0 10.0 87 95-199 145-236 (324)
486 PLN02396 hexaprenyldihydroxybe 96.4 0.021 4.6E-07 46.8 8.2 95 94-199 130-235 (322)
487 PLN02490 MPBQ/MSBQ methyltrans 96.4 0.03 6.4E-07 46.3 9.0 104 88-200 105-216 (340)
488 PRK10901 16S rRNA methyltransf 96.4 0.024 5.3E-07 48.4 8.9 103 88-198 237-371 (427)
489 PRK07878 molybdopterin biosynt 96.4 0.075 1.6E-06 44.9 11.7 36 95-130 41-76 (392)
490 PRK12549 shikimate 5-dehydroge 96.4 0.013 2.9E-07 47.2 6.9 95 94-200 125-228 (284)
491 cd05312 NAD_bind_1_malic_enz N 96.4 0.16 3.6E-06 40.6 12.8 107 84-203 12-144 (279)
492 KOG4022 Dihydropteridine reduc 96.4 0.022 4.7E-07 41.7 7.1 95 97-200 4-130 (236)
493 PRK07411 hypothetical protein; 96.4 0.068 1.5E-06 45.1 11.3 36 95-130 37-72 (390)
494 PF01408 GFO_IDH_MocA: Oxidore 96.4 0.18 3.8E-06 34.7 11.7 84 98-194 2-88 (120)
495 PRK06300 enoyl-(acyl carrier p 96.4 0.17 3.8E-06 41.1 13.2 32 95-127 7-41 (299)
496 PRK15068 tRNA mo(5)U34 methylt 96.4 0.085 1.8E-06 43.3 11.5 97 91-198 118-225 (322)
497 PRK06522 2-dehydropantoate 2-r 96.4 0.059 1.3E-06 43.6 10.6 94 98-198 2-99 (304)
498 PRK14027 quinate/shikimate deh 96.3 0.023 5.1E-07 45.7 8.1 43 94-136 125-167 (283)
499 PRK13403 ketol-acid reductoiso 96.3 0.062 1.3E-06 43.9 10.4 87 94-197 14-104 (335)
500 TIGR02371 ala_DH_arch alanine 96.3 0.12 2.7E-06 42.5 12.4 101 89-203 121-226 (325)
No 1
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.8e-41 Score=264.89 Aligned_cols=213 Identities=54% Similarity=0.909 Sum_probs=190.0
Q ss_pred CCCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcchh
Q 048013 1 KVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEP 80 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~ 80 (216)
++|+.|+++|+||||++.|..+|+.|+.|+.|++|.|+...+.+.++.+|++++|++.+++.++++|++++++++|+++|
T Consensus 75 evG~~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~eP 154 (354)
T KOG0024|consen 75 EVGDEVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIEP 154 (354)
T ss_pred hhcccccccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhcccccc
Confidence 58999999999999999999999999999999999999999988878899999999999999999999999999999999
Q ss_pred hHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHH
Q 048013 81 LSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEK 160 (216)
Q Consensus 81 ~~~a~~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 160 (216)
++++|||.+.++++.|.++||+|+|++|+++...|+++|+..|++++..+.+++++++||++.+....... +..+..+.
T Consensus 155 LsV~~HAcr~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~-~~~~~~~~ 233 (354)
T KOG0024|consen 155 LSVGVHACRRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKS-SPQELAEL 233 (354)
T ss_pred hhhhhhhhhhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccc-cHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999877643322 22222222
Q ss_pred HHHHcC-CCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCCCCcccchhhhh
Q 048013 161 IQKAMG-TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAA 214 (216)
Q Consensus 161 ~~~~~~-~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~ 214 (216)
+....+ ..+|+.|||+|.....+.++..++.+|++++.|+....++||+..+..
T Consensus 234 v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~~~fpi~~v~~ 288 (354)
T KOG0024|consen 234 VEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAEEIQFPIIDVAL 288 (354)
T ss_pred HHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCCccccChhhhhh
Confidence 222223 569999999999888899999999999999999988888888876654
No 2
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=1.1e-40 Score=266.94 Aligned_cols=202 Identities=34% Similarity=0.527 Sum_probs=179.3
Q ss_pred CCCCCCCCCCCCCEEEE-cCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcc-
Q 048013 1 KVGSEVKTLVPGDRVAL-EPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMC- 78 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~-~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~- 78 (216)
++|++|+.||+||||.+ ....+|++|++|+.|++++|++....+. +.+|+|+||+++|+.+++++|+++++++||.+
T Consensus 71 ~vG~~V~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy-~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApll 149 (339)
T COG1064 71 EVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGY-TTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLL 149 (339)
T ss_pred EecCCCccCCCCCEEEecCccCCCCCCccccCcccccCCCccccce-eecCcceeEEEEchHHeEECCCCCChhhhhhhh
Confidence 58999999999999998 7789999999999999999999988888 68999999999999999999999999999966
Q ss_pred hhhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHH
Q 048013 79 EPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEV 158 (216)
Q Consensus 79 ~~~~~a~~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 158 (216)
....|+|++++..+++||++|+|+|+|++|++++|+|+++|++ |++++++++|++.++++|++.+++-. +++..+.+
T Consensus 150 CaGiT~y~alk~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga~-Via~~~~~~K~e~a~~lGAd~~i~~~--~~~~~~~~ 226 (339)
T COG1064 150 CAGITTYRALKKANVKPGKWVAVVGAGGLGHMAVQYAKAMGAE-VIAITRSEEKLELAKKLGADHVINSS--DSDALEAV 226 (339)
T ss_pred cCeeeEeeehhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCCe-EEEEeCChHHHHHHHHhCCcEEEEcC--CchhhHHh
Confidence 4677899999999999999999999999999999999999985 99999999999999999999988742 34544444
Q ss_pred HHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCC-CC-Ccccchhhhh
Q 048013 159 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH-RE-MTVPLTPAAA 214 (216)
Q Consensus 159 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~-~~~~~~~~~~ 214 (216)
++ .+|++||+++ +..+..++++|+++|+++++|++. +. ..++...+++
T Consensus 227 ~~-------~~d~ii~tv~-~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~ 276 (339)
T COG1064 227 KE-------IADAIIDTVG-PATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLIL 276 (339)
T ss_pred Hh-------hCcEEEECCC-hhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhh
Confidence 33 2999999999 789999999999999999999884 43 4566666654
No 3
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=1.2e-34 Score=232.52 Aligned_cols=209 Identities=24% Similarity=0.363 Sum_probs=173.7
Q ss_pred CCCCCCC------CCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCC------CCCCccceeEEecCC-ceEECC
Q 048013 1 KVGSEVK------TLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSP------PVHGCLANQVVHPAD-LCFKLP 67 (216)
Q Consensus 1 ~vG~~v~------~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~------~~~g~~~~~~~~~~~-~~~~ip 67 (216)
++|++|+ +|++||||++.+..+|++|.+|+.++++.|++...+|.. ..+|+|+||+.+|+. .++++|
T Consensus 12 ~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~v~~~~~~~~lP 91 (280)
T TIGR03366 12 ALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCHLPAGTAIVPVP 91 (280)
T ss_pred EeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEEecCCCcEEECC
Confidence 4789998 899999999999999999999999999999987665531 246999999999997 799999
Q ss_pred CCCCchhhhcch-hhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEe
Q 048013 68 DNVSLEEGAMCE-PLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVK 146 (216)
Q Consensus 68 ~~~~~~~aa~~~-~~~~a~~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~ 146 (216)
+++++++++.+. .+.++|++++.....++++|+|+|+|++|++++|+|+.+|+++|++++++++++++++++|++.+++
T Consensus 92 ~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~ 171 (280)
T TIGR03366 92 DDLPDAVAAPAGCATATVMAALEAAGDLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRRELALSFGATALAE 171 (280)
T ss_pred CCCCHHHhhHhhhHHHHHHHHHHhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCcEecC
Confidence 999999988665 5678899997777779999999999999999999999999976888899999999999999988766
Q ss_pred CCCCcccHHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCC--CCCcccchhhhhc
Q 048013 147 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH--REMTVPLTPAAAS 215 (216)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~ 215 (216)
.+ +..+.+.++ +.+.++|++||++|.+..++.++++++++|+++.+|+.. ...++++..+++|
T Consensus 172 ~~----~~~~~~~~~--~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~~~~ 236 (280)
T TIGR03366 172 PE----VLAERQGGL--QNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQVVRR 236 (280)
T ss_pred ch----hhHHHHHHH--hCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHHHhC
Confidence 32 122334443 246689999999998778899999999999999999643 3346666655543
No 4
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=4e-34 Score=235.63 Aligned_cols=203 Identities=31% Similarity=0.529 Sum_probs=171.8
Q ss_pred CCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCC----CCCCccceeEEecCCceEECCCCCCchhhhcchh
Q 048013 5 EVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSP----PVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEP 80 (216)
Q Consensus 5 ~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~ 80 (216)
+|+.|++||||++.+..+|++|++|+.+++++|++...+|.. ..+|+|+||+.+|+..++++|++++++++++..+
T Consensus 75 ~v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~ 154 (343)
T PRK09880 75 DSSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMAFAEP 154 (343)
T ss_pred cCccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHHhhcH
Confidence 467899999999999999999999999999999987665531 2469999999999999999999999988887788
Q ss_pred hHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHH
Q 048013 81 LSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEK 160 (216)
Q Consensus 81 ~~~a~~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 160 (216)
++++|++++.....++++|+|+|+|++|++++|+|+.+|+++|+++++++++++.++++|++.++++++ +++. +
T Consensus 155 ~~~a~~al~~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~--~~~~----~ 228 (343)
T PRK09880 155 LAVAIHAAHQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQN--DDLD----H 228 (343)
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCc--ccHH----H
Confidence 999999998777778999999999999999999999999976889999999999999999998887543 2332 2
Q ss_pred HHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCCCCcccchhhhh
Q 048013 161 IQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAA 214 (216)
Q Consensus 161 ~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~ 214 (216)
+.+. ..++|++||++|.+..+..++++++++|+++.+|+.....++++..+++
T Consensus 229 ~~~~-~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~ 281 (343)
T PRK09880 229 YKAE-KGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGAPPEFPMMTLIV 281 (343)
T ss_pred Hhcc-CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHHh
Confidence 2222 2369999999998777889999999999999999866555666655543
No 5
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=5.2e-34 Score=234.91 Aligned_cols=210 Identities=36% Similarity=0.634 Sum_probs=169.4
Q ss_pred CCCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCC----CCCCccceeEEecCCceEEC-CCCCCchhh
Q 048013 1 KVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSP----PVHGCLANQVVHPADLCFKL-PDNVSLEEG 75 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~i-p~~~~~~~a 75 (216)
++| .++.+++||||++.|..+|++|++|+.|++++|++..+++.. +.+|+|+||+.+|.+..+.+ |++++++.+
T Consensus 69 evG-~~~~~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~~~~~a 147 (350)
T COG1063 69 EVG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGIDEEAA 147 (350)
T ss_pred Eec-cccCCCCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCCChhhh
Confidence 467 667799999999999999999999999999999976655542 25799999999997666655 677688888
Q ss_pred hcchhhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHH-cCCCEEEeCCCCccc
Q 048013 76 AMCEPLSVGVHAC-RRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKK-LGADNIVKVSTNLQD 153 (216)
Q Consensus 76 a~~~~~~~a~~~l-~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~ 153 (216)
++.+++++++++. .....+++.+++|+|+|++|++++++++.+|+.+|+++|.++++++++++ .+++.+.+... ++
T Consensus 148 al~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~--~~ 225 (350)
T COG1063 148 ALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSE--DD 225 (350)
T ss_pred hhcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCcc--cc
Confidence 8999999998774 44445555699999999999999999999999999999999999999998 55555544221 13
Q ss_pred HHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCCCC-cccchhhhhc
Q 048013 154 IAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREM-TVPLTPAAAS 215 (216)
Q Consensus 154 ~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~ 215 (216)
....+.++ +.+.++|++|||+|.+..+..++++++++|+++++|+..... .++...++.|
T Consensus 226 ~~~~~~~~--t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~k 286 (350)
T COG1063 226 AGAEILEL--TGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSK 286 (350)
T ss_pred HHHHHHHH--hCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhc
Confidence 33334343 456799999999999888899999999999999999887765 5666555543
No 6
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=6.2e-34 Score=224.47 Aligned_cols=208 Identities=30% Similarity=0.513 Sum_probs=178.0
Q ss_pred CCCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCC-------C-CC----------CCCC--CccceeEEecC
Q 048013 1 KVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKG-------L-GS----------PPVH--GCLANQVVHPA 60 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~-------~-~~----------~~~~--g~~~~~~~~~~ 60 (216)
+||++|+++++||+|++.+...|++|.+|.+|++++|..... . |. .... ++|+||..+++
T Consensus 69 ~VG~gVt~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~ 148 (366)
T COG1062 69 AVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHE 148 (366)
T ss_pred EecCCccccCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecc
Confidence 589999999999999999999999999999999999984321 1 10 0112 49999999999
Q ss_pred CceEECCCCCCchhhhcch-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHH
Q 048013 61 DLCFKLPDNVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKK 138 (216)
Q Consensus 61 ~~~~~ip~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~ 138 (216)
..+.++++..+++.++++- ...|.+.+. +.+++++|+++.|.|.|++|+++||-|+..|+.+|+++|.+++|++++++
T Consensus 149 ~s~vki~~~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~ 228 (366)
T COG1062 149 ISLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKK 228 (366)
T ss_pred cceEECCCCCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHh
Confidence 9999999999999999875 556677765 88999999999999999999999999999999999999999999999999
Q ss_pred cCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCCCCcccchhh
Q 048013 139 LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPA 212 (216)
Q Consensus 139 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~ 212 (216)
||++..++..+.. +..+.++++ .++|.|++|||+|+.+.+++++++++++|+.+++|+......++++++
T Consensus 229 fGAT~~vn~~~~~-~vv~~i~~~---T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~ 298 (366)
T COG1062 229 FGATHFVNPKEVD-DVVEAIVEL---TDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPF 298 (366)
T ss_pred cCCceeecchhhh-hHHHHHHHh---cCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChH
Confidence 9999998743221 455555555 466999999999999999999999999999999998877666666554
No 7
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=2e-32 Score=225.06 Aligned_cols=197 Identities=34% Similarity=0.603 Sum_probs=169.9
Q ss_pred CCCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCC-CCCCCCCCccceeEEecCCceEECCCCCCchhhhcch
Q 048013 1 KVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKG-LGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCE 79 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~ 79 (216)
++|++|+.+++||+|++.+..+|++|+.|+.|++++|.+... +|. ..+|+|+||+.+|++.++++|+++++++++.+.
T Consensus 68 ~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~-~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~ 146 (339)
T cd08239 68 AVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGW-NRDGGHAEYMLVPEKTLIPLPDDLSFADGALLL 146 (339)
T ss_pred EECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCcCccccccc-CCCCcceeEEEechHHeEECCCCCCHHHhhhhc
Confidence 368899999999999999999999999999999999987654 443 457999999999999999999999999988664
Q ss_pred -hhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHH
Q 048013 80 -PLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEV 158 (216)
Q Consensus 80 -~~~~a~~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 158 (216)
++.++|++++...++++++|+|+|+|++|++++|+|+.+|+++|+++++++++++.++++|++.+++++. .+ .+.+
T Consensus 147 ~~~~ta~~~l~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~--~~-~~~~ 223 (339)
T cd08239 147 CGIGTAYHALRRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQ--DD-VQEI 223 (339)
T ss_pred chHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCc--ch-HHHH
Confidence 7889999998888899999999999999999999999999976888999999999999999988877532 23 3444
Q ss_pred HHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCC
Q 048013 159 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHR 203 (216)
Q Consensus 159 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 203 (216)
.++ +.++++|++||++|+......++++++++|+++.+|....
T Consensus 224 ~~~--~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 266 (339)
T cd08239 224 REL--TSGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGE 266 (339)
T ss_pred HHH--hCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCC
Confidence 444 2456899999999997777889999999999999997543
No 8
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.3e-33 Score=220.57 Aligned_cols=208 Identities=27% Similarity=0.436 Sum_probs=170.2
Q ss_pred CCCCCCCCCCCCCEEEEcC-CcCCCCCcchhCCCCCCCCCCC--CCCC----CCCCCccceeEEecCCceEECCCCCCch
Q 048013 1 KVGSEVKTLVPGDRVALEP-GISCWQCDYCKGGRYNLCPESK--GLGS----PPVHGCLANQVVHPADLCFKLPDNVSLE 73 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~-~~~~~~c~~~~~~~~~~~~~~~--~~~~----~~~~g~~~~~~~~~~~~~~~ip~~~~~~ 73 (216)
++|++|+.|++||||-+-+ +..|.+|++|.++.+++|++.- ..+. ..+.|+|++|+++++.++++||++++.+
T Consensus 79 kvGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~ 158 (360)
T KOG0023|consen 79 KVGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLA 158 (360)
T ss_pred EECCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChh
Confidence 4799999999999998764 6899999999999999999543 2232 2355779999999999999999999999
Q ss_pred hhhcch-hhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh-HHHHHHHHcCCCEEEeCCCCc
Q 048013 74 EGAMCE-PLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDD-YRLSVAKKLGADNIVKVSTNL 151 (216)
Q Consensus 74 ~aa~~~-~~~~a~~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~-~~~~~~~~~g~~~~~~~~~~~ 151 (216)
.||.+. ...|.|..+...++.||+++.|.|+|++|++++|+|+++|.+ |+++++++ +|.+.++.||++..++. ..+
T Consensus 159 ~aAPlLCaGITvYspLk~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~r-V~vis~~~~kkeea~~~LGAd~fv~~-~~d 236 (360)
T KOG0023|consen 159 SAAPLLCAGITVYSPLKRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGMR-VTVISTSSKKKEEAIKSLGADVFVDS-TED 236 (360)
T ss_pred hccchhhcceEEeehhHHcCCCCCcEEEEecCcccchHHHHHHHHhCcE-EEEEeCCchhHHHHHHhcCcceeEEe-cCC
Confidence 999665 455789999998999999999999977999999999999995 99998887 55667788999987663 234
Q ss_pred ccHHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCCCCcccchhhhhc
Q 048013 152 QDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAS 215 (216)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~ 215 (216)
+++.+.+.+ +...++|-+.+- ....+..++++|+++|+++++|++..+..+++.+++.+
T Consensus 237 ~d~~~~~~~---~~dg~~~~v~~~--a~~~~~~~~~~lk~~Gt~V~vg~p~~~~~~~~~~lil~ 295 (360)
T KOG0023|consen 237 PDIMKAIMK---TTDGGIDTVSNL--AEHALEPLLGLLKVNGTLVLVGLPEKPLKLDTFPLILG 295 (360)
T ss_pred HHHHHHHHH---hhcCcceeeeec--cccchHHHHHHhhcCCEEEEEeCcCCcccccchhhhcc
Confidence 566555544 334456666554 44677899999999999999999998888888887754
No 9
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.1e-32 Score=214.49 Aligned_cols=209 Identities=28% Similarity=0.456 Sum_probs=179.0
Q ss_pred CCCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCC--------C------C-------CCCCccceeEEec
Q 048013 1 KVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLG--------S------P-------PVHGCLANQVVHP 59 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~--------~------~-------~~~g~~~~~~~~~ 59 (216)
++|++|+.+++||+|++.....|++|.+|+.++.|+|+...... . . ....+|+||.+++
T Consensus 75 SvGegV~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~ 154 (375)
T KOG0022|consen 75 SVGEGVTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVD 154 (375)
T ss_pred EecCCccccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEee
Confidence 47999999999999999999999999999999999997543221 1 0 1124899999999
Q ss_pred CCceEECCCCCCchhhhcch-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHH
Q 048013 60 ADLCFKLPDNVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK 137 (216)
Q Consensus 60 ~~~~~~ip~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~ 137 (216)
...+.+|++..+++.++++. .++|+|.|. +.+++++|+++.|.|.|++|+++++-|++.|+.++|.+|.|++|.+.++
T Consensus 155 ~~~v~kId~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak 234 (375)
T KOG0022|consen 155 DISVAKIDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAK 234 (375)
T ss_pred cceeEecCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHH
Confidence 99999999999999999775 788898775 8899999999999999999999999999999999999999999999999
Q ss_pred HcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcC-CEEEEeccCCCCCcccchhh
Q 048013 138 KLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHREMTVPLTPA 212 (216)
Q Consensus 138 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~ 212 (216)
+||+++.++..+......+.+.++ .+.|+|+.|||+|+.+.+++++.+++.+ |+-+++|+.+....++++++
T Consensus 235 ~fGaTe~iNp~d~~~~i~evi~Em---TdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~ 307 (375)
T KOG0022|consen 235 EFGATEFINPKDLKKPIQEVIIEM---TDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPF 307 (375)
T ss_pred hcCcceecChhhccccHHHHHHHH---hcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchh
Confidence 999999988542222234444444 5789999999999999999999999988 99999998887666666654
No 10
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=3.9e-32 Score=226.76 Aligned_cols=201 Identities=28% Similarity=0.455 Sum_probs=169.5
Q ss_pred CCCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCC-----------------------CCCCccceeEE
Q 048013 1 KVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSP-----------------------PVHGCLANQVV 57 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~-----------------------~~~g~~~~~~~ 57 (216)
++|++|+.|++||||++.+..+|++|.+|..++++.|++....+.. ..+|+|+||+.
T Consensus 79 ~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~ 158 (381)
T PLN02740 79 SVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTV 158 (381)
T ss_pred EeCCCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEE
Confidence 4688899999999999999999999999999999999876432110 02589999999
Q ss_pred ecCCceEECCCCCCchhhhcch-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHH
Q 048013 58 HPADLCFKLPDNVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSV 135 (216)
Q Consensus 58 ~~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~ 135 (216)
+|.+.++++|+++++++++.+. ++.++|+++ +..+++++++|||+|+|++|++++|+|+.+|+.+|+++++++++++.
T Consensus 159 v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~ 238 (381)
T PLN02740 159 LDSACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEK 238 (381)
T ss_pred EehHHeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHH
Confidence 9999999999999999888664 678899886 66789999999999999999999999999999668999999999999
Q ss_pred HHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcC-CEEEEeccCCCC
Q 048013 136 AKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHRE 204 (216)
Q Consensus 136 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~ 204 (216)
++++|++.++++.+.++++.+.++++. .+ ++|++||++|....+..++.+++++ |+++++|+....
T Consensus 239 a~~~Ga~~~i~~~~~~~~~~~~v~~~~--~~-g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~ 305 (381)
T PLN02740 239 GKEMGITDFINPKDSDKPVHERIREMT--GG-GVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTP 305 (381)
T ss_pred HHHcCCcEEEecccccchHHHHHHHHh--CC-CCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCC
Confidence 999999888775432234656666553 33 8999999999878889999999996 999999976543
No 11
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=7.1e-32 Score=224.23 Aligned_cols=199 Identities=29% Similarity=0.459 Sum_probs=167.2
Q ss_pred CCCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCC---CCCC-----------------CCCCccceeEEecC
Q 048013 1 KVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKG---LGSP-----------------PVHGCLANQVVHPA 60 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~---~~~~-----------------~~~g~~~~~~~~~~ 60 (216)
++|++|+.|++||||++.+..+|++|++|+.|++++|.+... +|.. ...|+|+||+.+|+
T Consensus 69 ~vG~~v~~~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~ 148 (368)
T TIGR02818 69 AVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPE 148 (368)
T ss_pred EECCCCccCCCCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEech
Confidence 368899999999999999889999999999999999986421 1110 02479999999999
Q ss_pred CceEECCCCCCchhhhcch-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHH
Q 048013 61 DLCFKLPDNVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKK 138 (216)
Q Consensus 61 ~~~~~ip~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~ 138 (216)
+.++++|+++++++++.+. ++.++|+++ +...++++++|||+|+|++|++++|+|+.+|+.+|+++++++++++.+++
T Consensus 149 ~~~~~lP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~ 228 (368)
T TIGR02818 149 ISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKK 228 (368)
T ss_pred hheEECCCCCCHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 9999999999999988765 778899998 56789999999999999999999999999999669999999999999999
Q ss_pred cCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcC-CEEEEeccCC
Q 048013 139 LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGH 202 (216)
Q Consensus 139 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~ 202 (216)
+|++.++++.+.+.++.+.+++++ . .++|++||++|.+..+..++++++++ |+++.+|+..
T Consensus 229 ~Ga~~~i~~~~~~~~~~~~v~~~~--~-~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~ 290 (368)
T TIGR02818 229 LGATDCVNPNDYDKPIQEVIVEIT--D-GGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAG 290 (368)
T ss_pred hCCCeEEcccccchhHHHHHHHHh--C-CCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccC
Confidence 999988775432334555555553 3 38999999999877888999999886 9999999754
No 12
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=1.2e-31 Score=223.16 Aligned_cols=208 Identities=31% Similarity=0.493 Sum_probs=171.7
Q ss_pred CCCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCC---CCC-----------------CCCCccceeEEecC
Q 048013 1 KVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGL---GSP-----------------PVHGCLANQVVHPA 60 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~---~~~-----------------~~~g~~~~~~~~~~ 60 (216)
++|++|+.+++||||++.+...|++|+.|+.|++++|.+.... |.. ...|+|+||+.+|+
T Consensus 75 ~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~ 154 (371)
T cd08281 75 EVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSR 154 (371)
T ss_pred EeCCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecc
Confidence 4788999999999999988889999999999999999875321 100 01379999999999
Q ss_pred CceEECCCCCCchhhhcch-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHH
Q 048013 61 DLCFKLPDNVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKK 138 (216)
Q Consensus 61 ~~~~~ip~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~ 138 (216)
..++++|+++++++++.+. ++.++|+++ +..+++++++|+|+|+|++|++++|+|+..|+++|+++++++++++.+++
T Consensus 155 ~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~ 234 (371)
T cd08281 155 RSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARE 234 (371)
T ss_pred cceEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHH
Confidence 9999999999999998765 677899887 66789999999999999999999999999999658999999999999999
Q ss_pred cCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCC--CCcccchhhh
Q 048013 139 LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHR--EMTVPLTPAA 213 (216)
Q Consensus 139 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~ 213 (216)
+|++.++++. .+++.+.+++++ +.++|++||++|....+..++++++++|+++.+|.... ..+++...++
T Consensus 235 ~Ga~~~i~~~--~~~~~~~i~~~~---~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~ 306 (371)
T cd08281 235 LGATATVNAG--DPNAVEQVRELT---GGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLV 306 (371)
T ss_pred cCCceEeCCC--chhHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHh
Confidence 9998887753 345555565542 33899999999987788999999999999999997543 2445554444
No 13
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=1.4e-31 Score=220.87 Aligned_cols=201 Identities=32% Similarity=0.561 Sum_probs=171.4
Q ss_pred CCCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcchh
Q 048013 1 KVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEP 80 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~ 80 (216)
++|++|++|++||+|+..+..+|++|++|..|++++|.+...++. ...|+|+||+.+|+..++++|+++++++++.+++
T Consensus 67 ~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~~ 145 (347)
T PRK10309 67 AVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGS-RRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIEP 145 (347)
T ss_pred EeCCCCCCCCCCCEEEECCCcCCCCCcchhCcCcccCCCcceecc-CCCCccceeEEeehHHeEECcCCCCHHHhhhhhH
Confidence 468899999999999999999999999999999999987655554 4579999999999999999999999999998767
Q ss_pred hHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHH
Q 048013 81 LSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEK 160 (216)
Q Consensus 81 ~~~a~~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 160 (216)
+++++++++...++++++++|+|+|++|++++|+|+.+|+++|+++++++++++.++++|++.+++.+. .+ .+.+.+
T Consensus 146 ~~~~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~--~~-~~~~~~ 222 (347)
T PRK10309 146 ITVGLHAFHLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSRE--MS-APQIQS 222 (347)
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcc--cC-HHHHHH
Confidence 777888887778899999999999999999999999999976788899999999999999988776532 22 233444
Q ss_pred HHHHcCCCcc-EEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCCCCcc
Q 048013 161 IQKAMGTGID-VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTV 207 (216)
Q Consensus 161 ~~~~~~~~~d-~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~ 207 (216)
+ +.+.++| ++|||+|....+..++++++++|+++++|....+.++
T Consensus 223 ~--~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~ 268 (347)
T PRK10309 223 V--LRELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHL 268 (347)
T ss_pred H--hcCCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCccc
Confidence 3 2456788 9999999877889999999999999999976554434
No 14
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=2.3e-31 Score=221.77 Aligned_cols=204 Identities=24% Similarity=0.402 Sum_probs=167.8
Q ss_pred CCCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCC----------------CCC----CCCCccceeEEecC
Q 048013 1 KVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGL----------------GSP----PVHGCLANQVVHPA 60 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~----------------~~~----~~~g~~~~~~~~~~ 60 (216)
++|++|++|++||||+..+..+|++|.+|+.+++++|++.... |.. ...|+|+||+.+|+
T Consensus 77 ~vG~~v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~ 156 (378)
T PLN02827 77 SIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHS 156 (378)
T ss_pred EcCCCCcccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEech
Confidence 4789999999999999998889999999999999999874321 000 02489999999999
Q ss_pred CceEECCCCCCchhhhcch-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHH
Q 048013 61 DLCFKLPDNVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKK 138 (216)
Q Consensus 61 ~~~~~ip~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~ 138 (216)
..++++|+++++++++.+. .+.++|+++ +..+++++++|||+|+|++|++++|+|+.+|+.+|++++.++++.+.+++
T Consensus 157 ~~~~~iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~ 236 (378)
T PLN02827 157 GCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKT 236 (378)
T ss_pred hheEECCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH
Confidence 9999999999998888654 566788766 55778999999999999999999999999999768888889999999999
Q ss_pred cCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcC-CEEEEeccCCCCCcc
Q 048013 139 LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHREMTV 207 (216)
Q Consensus 139 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~ 207 (216)
+|++.++++.+.++++.+.+++++ +.++|++||++|....+..+++.++++ |+++.+|....+..+
T Consensus 237 lGa~~~i~~~~~~~~~~~~v~~~~---~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~ 303 (378)
T PLN02827 237 FGVTDFINPNDLSEPIQQVIKRMT---GGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEV 303 (378)
T ss_pred cCCcEEEcccccchHHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccc
Confidence 999888775432235555565553 338999999999867788999999998 999999986543333
No 15
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=2.2e-31 Score=220.50 Aligned_cols=209 Identities=29% Similarity=0.454 Sum_probs=171.4
Q ss_pred CCCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCC--------CCC----CCCCccceeEEecCCceEECCC
Q 048013 1 KVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGL--------GSP----PVHGCLANQVVHPADLCFKLPD 68 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~--------~~~----~~~g~~~~~~~~~~~~~~~ip~ 68 (216)
++|++|++|++||||++.+..+|++|..|..+++++|...... |.. ...|+|+||+.+|++.++++|+
T Consensus 68 ~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~ 147 (358)
T TIGR03451 68 AVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDP 147 (358)
T ss_pred EeCCCCcccCCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCC
Confidence 4789999999999999999999999999999999999753210 110 1359999999999999999999
Q ss_pred CCCchhhhcch-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEe
Q 048013 69 NVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVK 146 (216)
Q Consensus 69 ~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~ 146 (216)
++++++++.+. .+.++|+++ +...++++++|||+|+|++|++++|+|+.+|+++|+++++++++++.++++|++.+++
T Consensus 148 ~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~ 227 (358)
T TIGR03451 148 AADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVN 227 (358)
T ss_pred CCChhHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEc
Confidence 99999888665 566788776 5677899999999999999999999999999966899999999999999999988877
Q ss_pred CCCCcccHHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCCC--Ccccchhhh
Q 048013 147 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHRE--MTVPLTPAA 213 (216)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~ 213 (216)
+. ..++.+.+.++ +.+.++|++||++|++..+..++++++++|+++.+|..... .++++..++
T Consensus 228 ~~--~~~~~~~i~~~--~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~ 292 (358)
T TIGR03451 228 SS--GTDPVEAIRAL--TGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVF 292 (358)
T ss_pred CC--CcCHHHHHHHH--hCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHh
Confidence 53 34565556554 24568999999999877889999999999999999976543 344443333
No 16
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=4.3e-31 Score=218.09 Aligned_cols=208 Identities=25% Similarity=0.453 Sum_probs=172.9
Q ss_pred CCCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCC------CCCchh
Q 048013 1 KVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPD------NVSLEE 74 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~------~~~~~~ 74 (216)
++|++++.+ +||||++.+..+|++|..|+.+++++|......|. ..+|+|+||+.+|++.++++|+ ++++++
T Consensus 67 ~vG~~v~~~-~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~-~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~ 144 (349)
T TIGR03201 67 QAGAGAASW-IGKAVIVPAVIPCGECELCKTGRGTICRAQKMPGN-DMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEH 144 (349)
T ss_pred EeCCCcCCC-CCCEEEECCCCCCCCChhhhCcCcccCCCCCccCc-CCCCcccceEEechHHeEECCcccccccCCCHHH
Confidence 468888877 99999999999999999999999999988766654 3469999999999999999998 788888
Q ss_pred hhcc-hhhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCc-c
Q 048013 75 GAMC-EPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNL-Q 152 (216)
Q Consensus 75 aa~~-~~~~~a~~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~-~ 152 (216)
++.+ .++.++|++++...++++++|+|+|+|++|++++++|+.+|++ |++++++++++++++++|++.++++...+ +
T Consensus 145 ~a~~~~~~~ta~~a~~~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~~-vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~ 223 (349)
T TIGR03201 145 VSVVADAVTTPYQAAVQAGLKKGDLVIVIGAGGVGGYMVQTAKAMGAA-VVAIDIDPEKLEMMKGFGADLTLNPKDKSAR 223 (349)
T ss_pred hhhhcchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCe-EEEEcCCHHHHHHHHHhCCceEecCccccHH
Confidence 7755 4788999999778889999999999999999999999999995 89999999999999999998877643321 2
Q ss_pred cHHHHHHHHHHHcCCCcc----EEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCCCCcccchhhh
Q 048013 153 DIAEEVEKIQKAMGTGID----VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAA 213 (216)
Q Consensus 153 ~~~~~~~~~~~~~~~~~d----~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 213 (216)
++.+.++++ +.++++| ++||++|+....+.++++++++|+++.+|......++++..++
T Consensus 224 ~~~~~~~~~--t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~ 286 (349)
T TIGR03201 224 EVKKLIKAF--AKARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAKTEYRLSNLM 286 (349)
T ss_pred HHHHHHHhh--cccCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCCcccCHHHHh
Confidence 344444444 3456776 8999999977788899999999999999986654556555544
No 17
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=6e-31 Score=218.69 Aligned_cols=199 Identities=28% Similarity=0.499 Sum_probs=167.5
Q ss_pred CCCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCC---CC-----------------CCCCCccceeEEecC
Q 048013 1 KVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGL---GS-----------------PPVHGCLANQVVHPA 60 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~---~~-----------------~~~~g~~~~~~~~~~ 60 (216)
++|+++++|++||||+..+..+|++|++|+.++++.|.+.... |. ....|+|+||+.+++
T Consensus 70 ~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~ 149 (368)
T cd08300 70 SVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAE 149 (368)
T ss_pred EeCCCCccCCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEch
Confidence 4688999999999999988999999999999999999864311 10 012479999999999
Q ss_pred CceEECCCCCCchhhhcch-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHH
Q 048013 61 DLCFKLPDNVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKK 138 (216)
Q Consensus 61 ~~~~~ip~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~ 138 (216)
..++++|+++++++++.+. ++.++|+++ +...++++++|||+|+|++|++++|+|+.+|+.+|+++++++++++.+++
T Consensus 150 ~~~~~iP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~ 229 (368)
T cd08300 150 ISVAKINPEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKK 229 (368)
T ss_pred hceEeCCCCCChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence 9999999999999988665 778999987 66789999999999999999999999999999668999999999999999
Q ss_pred cCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcC-CEEEEeccCC
Q 048013 139 LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGH 202 (216)
Q Consensus 139 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~ 202 (216)
+|++.++++.+.++++.+.+.+++ +.++|++||++|+...+..++++++++ |+++.+|+..
T Consensus 230 lGa~~~i~~~~~~~~~~~~v~~~~---~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~ 291 (368)
T cd08300 230 FGATDCVNPKDHDKPIQQVLVEMT---DGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAA 291 (368)
T ss_pred cCCCEEEcccccchHHHHHHHHHh---CCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCC
Confidence 999988875432234666666553 348999999999877889999999886 9999999764
No 18
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=99.98 E-value=1.3e-30 Score=216.78 Aligned_cols=200 Identities=28% Similarity=0.456 Sum_probs=166.8
Q ss_pred CCCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCC---CC-----------C-------CCCCccceeEEec
Q 048013 1 KVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGL---GS-----------P-------PVHGCLANQVVHP 59 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~---~~-----------~-------~~~g~~~~~~~~~ 59 (216)
++|++|+.|++||||++.+..+|++|..|..+++++|.+.... +. . ...|+|+||+.+|
T Consensus 70 ~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~ 149 (369)
T cd08301 70 SVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVH 149 (369)
T ss_pred EeCCCCCccccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEe
Confidence 4788999999999999999999999999999999999875321 10 0 0248899999999
Q ss_pred CCceEECCCCCCchhhhcch-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHH
Q 048013 60 ADLCFKLPDNVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK 137 (216)
Q Consensus 60 ~~~~~~ip~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~ 137 (216)
+..++++|+++++++++.+. ++.++|+++ +..+++++++|+|+|+|++|++++|+|+.+|+.+|+++++++++.+.++
T Consensus 150 ~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~ 229 (369)
T cd08301 150 VGCVAKINPEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAK 229 (369)
T ss_pred cccEEECCCCCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence 99999999999999988664 677888876 5678999999999999999999999999999855899999999999999
Q ss_pred HcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcC-CEEEEeccCCC
Q 048013 138 KLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHR 203 (216)
Q Consensus 138 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~ 203 (216)
++|++.++++....+++.+.++++. +.++|++||++|....+..++++++++ |+++++|+...
T Consensus 230 ~~Ga~~~i~~~~~~~~~~~~v~~~~---~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~ 293 (369)
T cd08301 230 KFGVTEFVNPKDHDKPVQEVIAEMT---GGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHK 293 (369)
T ss_pred HcCCceEEcccccchhHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCC
Confidence 9999887765432234545555542 348999999999877788899999996 99999997654
No 19
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=99.98 E-value=1.9e-30 Score=214.36 Aligned_cols=209 Identities=41% Similarity=0.664 Sum_probs=177.5
Q ss_pred CCCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcchh
Q 048013 1 KVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEP 80 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~ 80 (216)
++|++|+.|++||+|+..+...|++|.+|+.+.+++|.+....+....+|+|++|+.++...++++|+++++++++.+.+
T Consensus 78 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~~~ 157 (351)
T cd08233 78 EVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALVEP 157 (351)
T ss_pred EeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhccH
Confidence 36888999999999999988999999999999999998766555422369999999999999999999999999887778
Q ss_pred hHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHH
Q 048013 81 LSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEK 160 (216)
Q Consensus 81 ~~~a~~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 160 (216)
+.++|++++..+++++++++|+|+|++|++++|+|+.+|+++|+++++++++.+.++++|++.++++. ..++.+.+++
T Consensus 158 ~~ta~~~l~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~--~~~~~~~l~~ 235 (351)
T cd08233 158 LAVAWHAVRRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPT--EVDVVAEVRK 235 (351)
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCC--ccCHHHHHHH
Confidence 88999999778899999999999999999999999999996688899999999999999998887753 3456666655
Q ss_pred HHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCCCCcccchhhh
Q 048013 161 IQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAA 213 (216)
Q Consensus 161 ~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 213 (216)
+. .++++|++||++|....++.++++|+++|+++.+|......++++..++
T Consensus 236 ~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 286 (351)
T cd08233 236 LT--GGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLV 286 (351)
T ss_pred Hh--CCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCCCCccCHHHHH
Confidence 42 4567999999999767889999999999999999976555555554444
No 20
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=99.98 E-value=1.6e-30 Score=217.46 Aligned_cols=197 Identities=27% Similarity=0.541 Sum_probs=160.4
Q ss_pred CCCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCC------CCCCC---CCCCccceeEEecCC--ceEECCCC
Q 048013 1 KVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESK------GLGSP---PVHGCLANQVVHPAD--LCFKLPDN 69 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~------~~~~~---~~~g~~~~~~~~~~~--~~~~ip~~ 69 (216)
++|++|+.|++||||++.+..+|++|++|+.|++++|.+.. .++.. ..+|+|+||+.+|+. .++++|++
T Consensus 75 ~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~~ 154 (393)
T TIGR02819 75 EKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDR 154 (393)
T ss_pred EEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECCCc
Confidence 47899999999999999999999999999999999999743 12221 246999999999964 69999987
Q ss_pred CCc----hh-hhcchhhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEE
Q 048013 70 VSL----EE-GAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNI 144 (216)
Q Consensus 70 ~~~----~~-aa~~~~~~~a~~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~ 144 (216)
++. .. +++..++.++|++++..+++++++|+|.|+|++|++++|+|+.+|++.+++++++++++++++++|++.
T Consensus 155 ~~~~~~~~~~a~l~~~~~ta~~a~~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~Ga~~- 233 (393)
T TIGR02819 155 DQALEKIRDLTMLSDIFPTGYHGAVTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGCET- 233 (393)
T ss_pred ccccccccceeeeccHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHcCCeE-
Confidence 653 22 334557889999998788999999999889999999999999999986666788888999999999974
Q ss_pred EeCCCCcccHHHHHHHHHHHcCCCccEEEEcCCCH--------------HHHHHHHHHhhcCCEEEEeccC
Q 048013 145 VKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFN--------------KTMSTALSATRAGGKVCLVGMG 201 (216)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~--------------~~~~~~~~~l~~~G~~v~~g~~ 201 (216)
++.. ...++.+.+.++ +.+.++|++||++|.+ ..++.++++++++|+++.+|+.
T Consensus 234 v~~~-~~~~~~~~v~~~--~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~ 301 (393)
T TIGR02819 234 VDLS-KDATLPEQIEQI--LGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLY 301 (393)
T ss_pred EecC-CcccHHHHHHHH--cCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeec
Confidence 3322 223455555554 2456899999999985 3789999999999999999985
No 21
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=99.97 E-value=2.2e-30 Score=214.63 Aligned_cols=203 Identities=23% Similarity=0.414 Sum_probs=162.1
Q ss_pred CCCCCCCCCCCCCEEEEcCC-cCCCCCcchhCCCCCCCCCCCCC-------CCCCCCCccceeEEecCCceEECCCCCCc
Q 048013 1 KVGSEVKTLVPGDRVALEPG-ISCWQCDYCKGGRYNLCPESKGL-------GSPPVHGCLANQVVHPADLCFKLPDNVSL 72 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~-~~~~~c~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~ 72 (216)
++|++|+.|++||||++.+. ..|++|++|+.|++++|++..+. |. ..+|+|+||+.+|++.++++|+++++
T Consensus 80 ~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~-~~~G~~aey~~v~~~~~~~lP~~ls~ 158 (360)
T PLN02586 80 KLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGT-KNYGGYSDMIVVDQHFVLRFPDNLPL 158 (360)
T ss_pred EECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCC-cCCCccceEEEEchHHeeeCCCCCCH
Confidence 47899999999999986544 58999999999999999976532 22 23699999999999999999999999
Q ss_pred hhhhcch-hhHHHHHHHHH-cCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHH-HHHHHHcCCCEEEeCCC
Q 048013 73 EEGAMCE-PLSVGVHACRR-ANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYR-LSVAKKLGADNIVKVST 149 (216)
Q Consensus 73 ~~aa~~~-~~~~a~~~l~~-~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~-~~~~~~~g~~~~~~~~~ 149 (216)
++++.+. .+.++|+++.. ..++++++|+|.|+|++|++++|+|+.+|++ +++++.++++ .+.++++|++.+++...
T Consensus 159 ~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~-vi~~~~~~~~~~~~~~~~Ga~~vi~~~~ 237 (360)
T PLN02586 159 DAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLK-VTVISSSSNKEDEAINRLGADSFLVSTD 237 (360)
T ss_pred HHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEeCCcchhhhHHHhCCCcEEEcCCC
Confidence 9988655 56688988854 4567999999999999999999999999996 7777666555 45667899988776432
Q ss_pred CcccHHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCCCCcccchhhhh
Q 048013 150 NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAA 214 (216)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~ 214 (216)
. +.+.+. .+ ++|++||++|....+..++++++++|+++.+|......++++..++.
T Consensus 238 --~---~~~~~~---~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~ 293 (360)
T PLN02586 238 --P---EKMKAA---IG-TMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFPLVL 293 (360)
T ss_pred --H---HHHHhh---cC-CCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCCCccCHHHHHh
Confidence 1 223333 23 69999999998677889999999999999999765555666665543
No 22
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=99.97 E-value=4.7e-30 Score=213.13 Aligned_cols=206 Identities=28% Similarity=0.503 Sum_probs=169.4
Q ss_pred CCCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCC-------------------CCCCccceeEEecCC
Q 048013 1 KVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSP-------------------PVHGCLANQVVHPAD 61 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~-------------------~~~g~~~~~~~~~~~ 61 (216)
++|++|+.+++||+|+..+...|++|.+|..|++++|++....+.. ...|+|+||+.++++
T Consensus 69 ~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~ 148 (365)
T cd08277 69 SVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDEN 148 (365)
T ss_pred eeCCCCccCCCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchh
Confidence 4788999999999999988899999999999999999875432110 124899999999999
Q ss_pred ceEECCCCCCchhhhcch-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHc
Q 048013 62 LCFKLPDNVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKL 139 (216)
Q Consensus 62 ~~~~ip~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~ 139 (216)
.++++|+++++++++.+. ++.++|+++ +...++++++++|+|+|++|++++++|+.+|+.+|+++++++++++.++++
T Consensus 149 ~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ 228 (365)
T cd08277 149 YVAKIDPAAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEF 228 (365)
T ss_pred heEECCCCCCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHc
Confidence 999999999999998665 778999987 667899999999999999999999999999996689999999999999999
Q ss_pred CCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcC-CEEEEeccCCC-CCcccc
Q 048013 140 GADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHR-EMTVPL 209 (216)
Q Consensus 140 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~ 209 (216)
|++.+++....+.++.+.++++. ++++|++||++|....+..++++++++ |+++.+|.... ..+++.
T Consensus 229 ga~~~i~~~~~~~~~~~~~~~~~---~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~ 297 (365)
T cd08277 229 GATDFINPKDSDKPVSEVIREMT---GGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRP 297 (365)
T ss_pred CCCcEeccccccchHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCH
Confidence 99887764332233445555542 358999999999867788999999885 99999997543 234444
No 23
>PLN02702 L-idonate 5-dehydrogenase
Probab=99.97 E-value=8e-30 Score=211.63 Aligned_cols=202 Identities=86% Similarity=1.368 Sum_probs=172.3
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcchhh
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPL 81 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~ 81 (216)
+|++++.|++||+|+..+..+|++|..|..|..++|+....++....+|+|++|+.+++..++++|++++++++++..++
T Consensus 88 vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~~~~ 167 (364)
T PLN02702 88 VGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMCEPL 167 (364)
T ss_pred ECCCCCCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHHHhhhhHH
Confidence 68888889999999999999999999999999999987655554345799999999999999999999999998865677
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHH
Q 048013 82 SVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKI 161 (216)
Q Consensus 82 ~~a~~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 161 (216)
++++++++..++.++++++|+|+|++|++++++++.+|+..++++++++++.+.++++|++.+++++....++.+.+.++
T Consensus 168 ~~a~~~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 247 (364)
T PLN02702 168 SVGVHACRRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEI 247 (364)
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCcccccHHHHHHHH
Confidence 77888887778899999999999999999999999999977888888999999999999998877644445566666555
Q ss_pred HHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCC
Q 048013 162 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHR 203 (216)
Q Consensus 162 ~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 203 (216)
.+..++++|++||++|....+..++++++++|+++.+|....
T Consensus 248 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 289 (364)
T PLN02702 248 QKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHN 289 (364)
T ss_pred hhhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCC
Confidence 433456899999999976788999999999999999996433
No 24
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=99.97 E-value=9.7e-30 Score=211.68 Aligned_cols=203 Identities=21% Similarity=0.397 Sum_probs=162.7
Q ss_pred CCCCCCCCCCCCCEEEEcCCc-CCCCCcchhCCCCCCCCCCCCC-------CCCCCCCccceeEEecCCceEECCCCCCc
Q 048013 1 KVGSEVKTLVPGDRVALEPGI-SCWQCDYCKGGRYNLCPESKGL-------GSPPVHGCLANQVVHPADLCFKLPDNVSL 72 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~~-~~~~c~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~ 72 (216)
++|++|+.|++||||++.+.. .|++|++|+.|++++|++.... |. ..+|+|+||+.+|++.++++|+++++
T Consensus 74 ~vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~-~~~G~~aey~~v~~~~~~~lP~~ls~ 152 (375)
T PLN02178 74 KVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGT-RNQGGYSDVIVVDHRFVLSIPDGLPS 152 (375)
T ss_pred EECCCCCccCCCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCC-cCCCccccEEEEchHHeEECCCCCCH
Confidence 478999999999999876654 6999999999999999976432 22 23699999999999999999999999
Q ss_pred hhhhcch-hhHHHHHHHHHcC--CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHH-HHHHHHcCCCEEEeCC
Q 048013 73 EEGAMCE-PLSVGVHACRRAN--IGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYR-LSVAKKLGADNIVKVS 148 (216)
Q Consensus 73 ~~aa~~~-~~~~a~~~l~~~~--~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~-~~~~~~~g~~~~~~~~ 148 (216)
++++.+. ...++|+++.... .+++++++|.|+|++|++++|+|+.+|++ |++++.++++ .+.++++|++.++++.
T Consensus 153 ~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~-Vi~~~~~~~~~~~~a~~lGa~~~i~~~ 231 (375)
T PLN02178 153 DSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGLR-VTVISRSSEKEREAIDRLGADSFLVTT 231 (375)
T ss_pred HHcchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCCe-EEEEeCChHHhHHHHHhCCCcEEEcCc
Confidence 9988655 5667898886543 36899999999999999999999999995 7777766544 6778899998877643
Q ss_pred CCcccHHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCCCCcccchhhhh
Q 048013 149 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAA 214 (216)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~ 214 (216)
+ . +.+.+. .+ ++|++||++|.+..+..++++++++|+++.+|+...+.++++..+++
T Consensus 232 ~--~---~~v~~~---~~-~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~ 288 (375)
T PLN02178 232 D--S---QKMKEA---VG-TMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVL 288 (375)
T ss_pred C--H---HHHHHh---hC-CCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCCCCccCHHHHHh
Confidence 2 1 233333 23 69999999998667889999999999999999765555666665543
No 25
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=99.97 E-value=5e-30 Score=208.94 Aligned_cols=182 Identities=34% Similarity=0.468 Sum_probs=152.9
Q ss_pred CCCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcch-
Q 048013 1 KVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCE- 79 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~- 79 (216)
++|++|+.|++||||+... ..| .+|+|+||+.+|++.++++|+++++++|+.++
T Consensus 71 avG~~V~~~~~GdrV~~~~-~~~------------------------~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~ 125 (326)
T COG0604 71 AVGSGVTGFKVGDRVAALG-GVG------------------------RDGGYAEYVVVPADWLVPLPDGLSFEEAAALPL 125 (326)
T ss_pred EeCCCCCCcCCCCEEEEcc-CCC------------------------CCCcceeEEEecHHHceeCCCCCCHHHHHHHHH
Confidence 4799999999999999863 110 45999999999999999999999999999776
Q ss_pred hhHHHHHHHH-HcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHH
Q 048013 80 PLSVGVHACR-RANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEE 157 (216)
Q Consensus 80 ~~~~a~~~l~-~~~~~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 157 (216)
.+.|||+++. ..+++++++|||+|+ |++|++++|+|+++|+. ++++.+++++.++++++|++.+++|.+ +++.+.
T Consensus 126 ~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~-~v~~~~s~~k~~~~~~lGAd~vi~y~~--~~~~~~ 202 (326)
T COG0604 126 AGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGAT-VVAVVSSSEKLELLKELGADHVINYRE--EDFVEQ 202 (326)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCc-EEEEecCHHHHHHHHhcCCCEEEcCCc--ccHHHH
Confidence 7779999995 477999999999985 99999999999999984 666667777777999999999998643 568888
Q ss_pred HHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCC--CCcccchhhh
Q 048013 158 VEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHR--EMTVPLTPAA 213 (216)
Q Consensus 158 ~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~ 213 (216)
+++++ .++++|+|+|++|+ +.+...+..|+++|+++.+|...+ ..++++.+++
T Consensus 203 v~~~t--~g~gvDvv~D~vG~-~~~~~~l~~l~~~G~lv~ig~~~g~~~~~~~~~~~~ 257 (326)
T COG0604 203 VRELT--GGKGVDVVLDTVGG-DTFAASLAALAPGGRLVSIGALSGGPPVPLNLLPLL 257 (326)
T ss_pred HHHHc--CCCCceEEEECCCH-HHHHHHHHHhccCCEEEEEecCCCCCccccCHHHHh
Confidence 88773 67789999999999 777889999999999999997662 3455555444
No 26
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=99.97 E-value=9.6e-30 Score=208.45 Aligned_cols=197 Identities=24% Similarity=0.304 Sum_probs=166.1
Q ss_pred CCCCCCCCCCCCCEEEEcCC-cCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcc-
Q 048013 1 KVGSEVKTLVPGDRVALEPG-ISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMC- 78 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~-~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~- 78 (216)
++|++|+.|++||||++.+. ..|+.|++|+.+++++|.+...+|. ..+|+|+||+.+|+..++++|+++++++++.+
T Consensus 70 ~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~ 148 (329)
T TIGR02822 70 GRGADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGW-DTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLL 148 (329)
T ss_pred EECCCCcccCCCCEEEEcCccCcCCCChHHhCcCcccCCCcccCCc-ccCCcceeEEEeccccEEECCCCCCHHHhHHHh
Confidence 46889999999999988654 4799999999999999998776665 35799999999999999999999999888854
Q ss_pred hhhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHH
Q 048013 79 EPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEV 158 (216)
Q Consensus 79 ~~~~~a~~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 158 (216)
.++.++|++++..+++++++++|+|+|++|++++|+|+.+|++ |++++++++++++++++|++.+++..+.
T Consensus 149 ~~~~ta~~~~~~~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~~-vi~~~~~~~~~~~a~~~Ga~~vi~~~~~-------- 219 (329)
T TIGR02822 149 CAGIIGYRALLRASLPPGGRLGLYGFGGSAHLTAQVALAQGAT-VHVMTRGAAARRLALALGAASAGGAYDT-------- 219 (329)
T ss_pred ccchHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHCCCe-EEEEeCChHHHHHHHHhCCceecccccc--------
Confidence 4777899999778899999999999999999999999999995 8999999999999999999987763210
Q ss_pred HHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCCC-Ccccchhhh
Q 048013 159 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHRE-MTVPLTPAA 213 (216)
Q Consensus 159 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~ 213 (216)
...++|+++++.+....+..++++++++|+++.+|+.... .++++..++
T Consensus 220 ------~~~~~d~~i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~ 269 (329)
T TIGR02822 220 ------PPEPLDAAILFAPAGGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHL 269 (329)
T ss_pred ------CcccceEEEECCCcHHHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHh
Confidence 1236899999888777889999999999999999975332 345554443
No 27
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=99.97 E-value=1.6e-29 Score=209.23 Aligned_cols=191 Identities=28% Similarity=0.429 Sum_probs=154.7
Q ss_pred CCCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCC--CCCCCCCccceeEEecCCceEECCCCCCchhhhcc
Q 048013 1 KVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGL--GSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMC 78 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~ 78 (216)
++|++ +.|++||||+..+...|++|.+|+.|++++|...... |....+|+|+||+.+|++.++++|++++ +.+++.
T Consensus 71 ~vG~~-~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~-~~a~~~ 148 (355)
T cd08230 71 EVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA-DVGVLL 148 (355)
T ss_pred EecCC-CCCCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC-cceeec
Confidence 46888 8899999999988889999999999999999875543 3223469999999999999999999998 666666
Q ss_pred hhhHHHHHHHHH-------cCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcC---ChHHHHHHHHcCCCEEEeCC
Q 048013 79 EPLSVGVHACRR-------ANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDV---DDYRLSVAKKLGADNIVKVS 148 (216)
Q Consensus 79 ~~~~~a~~~l~~-------~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~---~~~~~~~~~~~g~~~~~~~~ 148 (216)
.+++++++++.. .+.+++++|+|+|+|++|++++|+|+.+|++ |+++++ ++++++.++++|++.+ ++.
T Consensus 149 ~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~~-vi~~~~~~~~~~~~~~~~~~Ga~~v-~~~ 226 (355)
T cd08230 149 EPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGFE-VYVLNRRDPPDPKADIVEELGATYV-NSS 226 (355)
T ss_pred chHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCCe-EEEEecCCCCHHHHHHHHHcCCEEe-cCC
Confidence 677776655422 2357899999999999999999999999995 888887 6788999999999863 432
Q ss_pred CCcccHHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCC
Q 048013 149 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHR 203 (216)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 203 (216)
++++.+ . + ...++|++||++|....+..+++.++++|+++++|+...
T Consensus 227 --~~~~~~-~-~----~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~ 273 (355)
T cd08230 227 --KTPVAE-V-K----LVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGG 273 (355)
T ss_pred --ccchhh-h-h----hcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCC
Confidence 233322 1 1 235799999999987778999999999999999997665
No 28
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=99.97 E-value=2e-28 Score=202.97 Aligned_cols=200 Identities=31% Similarity=0.503 Sum_probs=165.6
Q ss_pred CCCCCCCC------CCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCC------CCCCccceeEEecCC-ceEECC
Q 048013 1 KVGSEVKT------LVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSP------PVHGCLANQVVHPAD-LCFKLP 67 (216)
Q Consensus 1 ~vG~~v~~------~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~------~~~g~~~~~~~~~~~-~~~~ip 67 (216)
++|++|+. |++||+|+..+..+|++|..|+.++++.|.+...++.. ...|+|+||+.++++ .++++|
T Consensus 68 ~vG~~v~~~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP 147 (361)
T cd08231 68 ALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVP 147 (361)
T ss_pred EeCCCccccccCCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECC
Confidence 36788875 99999999999999999999999999999987666542 236999999999996 799999
Q ss_pred CCCCchhhhcc-hhhHHHHHHHHHcC-CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEE
Q 048013 68 DNVSLEEGAMC-EPLSVGVHACRRAN-IGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIV 145 (216)
Q Consensus 68 ~~~~~~~aa~~-~~~~~a~~~l~~~~-~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~ 145 (216)
+++++++++.+ .++.++|++++... .++++++||+|+|++|++++++|+.+|++.|+++++++++.+.++++|++.++
T Consensus 148 ~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi 227 (361)
T cd08231 148 DNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATI 227 (361)
T ss_pred CCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEE
Confidence 99988888876 58889999996544 45899999999999999999999999995588899999999999999998877
Q ss_pred eCCCCc-ccHHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCC
Q 048013 146 KVSTNL-QDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 146 ~~~~~~-~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
+++... .++.+.+.++ +.++++|++||++|+...+...+++++++|+++.+|...
T Consensus 228 ~~~~~~~~~~~~~i~~~--~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 283 (361)
T cd08231 228 DIDELPDPQRRAIVRDI--TGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVA 283 (361)
T ss_pred cCcccccHHHHHHHHHH--hCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCC
Confidence 654321 1122334444 346789999999998677889999999999999999654
No 29
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.97 E-value=1.8e-28 Score=201.89 Aligned_cols=205 Identities=56% Similarity=0.989 Sum_probs=171.0
Q ss_pred CCCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcchh
Q 048013 1 KVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEP 80 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~ 80 (216)
++|++++.+++||+|+..+..+|++|++|+.|+.++|....+.+.....|+|++|+.++++.++++|+++++.+++.+++
T Consensus 68 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~ 147 (343)
T cd05285 68 AVGSGVTHLKVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALVEP 147 (343)
T ss_pred eeCCCCCCCCCCCEEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhhhH
Confidence 36888889999999999999999999999999999998765433323569999999999999999999999999887678
Q ss_pred hHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccH---HHH
Q 048013 81 LSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDI---AEE 157 (216)
Q Consensus 81 ~~~a~~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~ 157 (216)
+.+++++++..+++++++++|+|+|++|++++++|+.+|+++|+++++++++.+.++++|.+.+++++. .++ .+.
T Consensus 148 ~~~a~~~~~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~--~~~~~~~~~ 225 (343)
T cd05285 148 LSVGVHACRRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT--EDTPESAEK 225 (343)
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEecccc--ccchhHHHH
Confidence 888998887888999999999988999999999999999965888888888988889999988876532 232 444
Q ss_pred HHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCCCCcccc
Q 048013 158 VEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPL 209 (216)
Q Consensus 158 ~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~ 209 (216)
+.+. +.++++|++||++|....++..+++++++|+++.+|.......+++
T Consensus 226 ~~~~--~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~ 275 (343)
T cd05285 226 IAEL--LGGKGPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPL 275 (343)
T ss_pred HHHH--hCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCH
Confidence 5544 3466799999999985578899999999999999996554334443
No 30
>PRK10083 putative oxidoreductase; Provisional
Probab=99.97 E-value=1.3e-28 Score=202.27 Aligned_cols=195 Identities=27% Similarity=0.491 Sum_probs=165.6
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcchhh
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPL 81 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~ 81 (216)
+|++|+.+++||+|++.+..+|+.|.+|..+++++|.+...++. ..+|+|+||+.++...++++|++++++.+++..++
T Consensus 68 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~~~~~~ 146 (339)
T PRK10083 68 VGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGV-HRDGGFSEYAVVPAKNAHRIPDAIADQYAVMVEPF 146 (339)
T ss_pred ECCCCccCCCCCEEEEccccCCCCCccccCcCcccCCCCceEEE-ccCCcceeeEEechHHeEECcCCCCHHHHhhhchH
Confidence 68889999999999999999999999999999999987665444 24699999999999999999999999888766688
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHH-cCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHH
Q 048013 82 SVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARA-FGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEK 160 (216)
Q Consensus 82 ~~a~~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~-~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 160 (216)
.+++++++..+++++++|+|+|+|++|++++++|+. +|++.++++++++++.+.++++|++.+++++. .++.+.+..
T Consensus 147 ~~a~~~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~--~~~~~~~~~ 224 (339)
T PRK10083 147 TIAANVTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ--EPLGEALEE 224 (339)
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc--ccHHHHHhc
Confidence 888877777889999999999999999999999996 69977888999999999999999988876532 344333321
Q ss_pred HHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCC
Q 048013 161 IQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHR 203 (216)
Q Consensus 161 ~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 203 (216)
.+.++|++||++|.+..+...+++++++|+++.+|....
T Consensus 225 ----~g~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 263 (339)
T PRK10083 225 ----KGIKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSE 263 (339)
T ss_pred ----CCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC
Confidence 244567999999976778999999999999999996543
No 31
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=99.97 E-value=3.4e-28 Score=202.51 Aligned_cols=200 Identities=27% Similarity=0.399 Sum_probs=163.8
Q ss_pred CCCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCC-------------------C-CCCCccceeEEecC
Q 048013 1 KVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGS-------------------P-PVHGCLANQVVHPA 60 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~-------------------~-~~~g~~~~~~~~~~ 60 (216)
++|++++.+++||+|++.+..+|++|.+|+.++++.|+.....+. . ...|+|+||+.+++
T Consensus 74 ~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~ 153 (373)
T cd08299 74 SVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDE 153 (373)
T ss_pred EeCCCCccCCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecc
Confidence 368888899999999998889999999999999999986533210 0 02589999999999
Q ss_pred CceEECCCCCCchhhhcch-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHH
Q 048013 61 DLCFKLPDNVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKK 138 (216)
Q Consensus 61 ~~~~~ip~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~ 138 (216)
+.++++|+++++++++.+. ++.++|+++ +...++++++++|+|+|++|++++++++.+|+++|+++++++++++.+++
T Consensus 154 ~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~ 233 (373)
T cd08299 154 IAVAKIDAAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKE 233 (373)
T ss_pred cceeeCCCCCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 9999999999999988665 778999886 66789999999999999999999999999999558999999999999999
Q ss_pred cCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHh-hcCCEEEEeccCCC
Q 048013 139 LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSAT-RAGGKVCLVGMGHR 203 (216)
Q Consensus 139 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l-~~~G~~v~~g~~~~ 203 (216)
+|++.+++..+..++..+.+.++. ++++|+++|++|.+..+..++..+ +++|+++.+|....
T Consensus 234 lGa~~~i~~~~~~~~~~~~v~~~~---~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~ 296 (373)
T cd08299 234 LGATECINPQDYKKPIQEVLTEMT---DGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPS 296 (373)
T ss_pred cCCceEecccccchhHHHHHHHHh---CCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCC
Confidence 999887765332223445555543 357999999999766677766655 67999999997543
No 32
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=99.96 E-value=6.6e-28 Score=201.52 Aligned_cols=205 Identities=28% Similarity=0.484 Sum_probs=168.8
Q ss_pred CCCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCC-------CCch
Q 048013 1 KVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDN-------VSLE 73 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~-------~~~~ 73 (216)
++|++++.|++||+|++.+..+|+.|+.|..+++++|......|. ..+|+|++|+.++++.++++|++ ++++
T Consensus 101 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~-~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~ 179 (384)
T cd08265 101 KTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGF-SADGAFAEYIAVNARYAWEINELREIYSEDKAFE 179 (384)
T ss_pred EECCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceeee-cCCCcceeeEEechHHeEECCccccccccCCCHH
Confidence 368888899999999999999999999999999999998766555 24799999999999999999986 4566
Q ss_pred hhhcchhhHHHHHHH-HH-cCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCC-
Q 048013 74 EGAMCEPLSVGVHAC-RR-ANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTN- 150 (216)
Q Consensus 74 ~aa~~~~~~~a~~~l-~~-~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~- 150 (216)
.+++..+++++|+++ .. .+++++++|+|+|+|++|++++++|+.+|+.+|+++++++++.+.++++|++.++++...
T Consensus 180 ~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~ 259 (384)
T cd08265 180 AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMR 259 (384)
T ss_pred HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcccccc
Confidence 566667888999998 44 678999999999889999999999999999668899888889999999999887765422
Q ss_pred cccHHHHHHHHHHHcCCCccEEEEcCCCH-HHHHHHHHHhhcCCEEEEeccCCCCCccc
Q 048013 151 LQDIAEEVEKIQKAMGTGIDVSFDCAGFN-KTMSTALSATRAGGKVCLVGMGHREMTVP 208 (216)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~ 208 (216)
..++.+.+.++. .++++|+++|++|++ ..+...+++|+++|+++.+|......+++
T Consensus 260 ~~~~~~~v~~~~--~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~ 316 (384)
T cd08265 260 DCLSGEKVMEVT--KGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPLH 316 (384)
T ss_pred cccHHHHHHHhc--CCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCCCccc
Confidence 125555565553 567899999999973 46788999999999999999654433333
No 33
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=99.96 E-value=1.4e-27 Score=198.28 Aligned_cols=199 Identities=30% Similarity=0.497 Sum_probs=165.6
Q ss_pred CCCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCC--------------------CCCCccceeEEecC
Q 048013 1 KVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSP--------------------PVHGCLANQVVHPA 60 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~--------------------~~~g~~~~~~~~~~ 60 (216)
++|++++.+++||+|+..+...|++|.+|..+++++|.....++.. ...|+|++|+.+++
T Consensus 67 ~vG~~v~~~~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~ 146 (365)
T cd05279 67 SIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSE 146 (365)
T ss_pred EeCCCcccCCCCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecC
Confidence 3688898999999999998899999999999999999765533210 02479999999999
Q ss_pred CceEECCCCCCchhhhcch-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHH
Q 048013 61 DLCFKLPDNVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKK 138 (216)
Q Consensus 61 ~~~~~ip~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~ 138 (216)
+.++++|+++++++++.+. ++.++|+++ +...++++++++|+|+|++|++++++|+.+|++.++++++++++.+.+++
T Consensus 147 ~~~~~lP~~~~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~ 226 (365)
T cd05279 147 ISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQ 226 (365)
T ss_pred CceEECCCCCCHHHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence 9999999999999888665 788899887 56789999999999989999999999999999767888889999999999
Q ss_pred cCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhh-cCCEEEEeccCC
Q 048013 139 LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGH 202 (216)
Q Consensus 139 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~-~~G~~v~~g~~~ 202 (216)
+|++.+++....+.++.+.++++ .++++|++||++|....+..++++++ ++|+++.+|...
T Consensus 227 ~g~~~~v~~~~~~~~~~~~l~~~---~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 288 (365)
T cd05279 227 LGATECINPRDQDKPIVEVLTEM---TDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPP 288 (365)
T ss_pred hCCCeecccccccchHHHHHHHH---hCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCC
Confidence 99988776433211444555554 24689999999987677889999999 999999998653
No 34
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.96 E-value=1.6e-27 Score=196.87 Aligned_cols=198 Identities=30% Similarity=0.435 Sum_probs=167.3
Q ss_pred CCCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCC---CCCCCCCCccceeEEecCC--ceEECCCCCCchhh
Q 048013 1 KVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKG---LGSPPVHGCLANQVVHPAD--LCFKLPDNVSLEEG 75 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~---~~~~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~a 75 (216)
++|++++.+++||+|+..+..+|++|..|..|+++.|.+... ++ ...+|+|+||+.+|.. .++++|++++++++
T Consensus 67 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~-~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~a 145 (351)
T cd08285 67 EVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFS-NFKDGVFAEYFHVNDADANLAPLPDGLTDEQA 145 (351)
T ss_pred EecCCcCccCCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCcccc-CCCCcceeEEEEcchhhCceEECCCCCCHHHh
Confidence 368888899999999998888999999999999999987531 11 1346999999999974 89999999999998
Q ss_pred hcc-hhhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccH
Q 048013 76 AMC-EPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDI 154 (216)
Q Consensus 76 a~~-~~~~~a~~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 154 (216)
+.+ .++.+++++++...+++++++||+|+|++|++++++|+.+|+..++++++++++.+.++++|++.+++++. .++
T Consensus 146 a~~~~~~~ta~~~~~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--~~~ 223 (351)
T cd08285 146 VMLPDMMSTGFHGAELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKN--GDV 223 (351)
T ss_pred hhhccchhhHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCC--CCH
Confidence 866 47788999987788999999999998999999999999999976888999999999999999988877532 355
Q ss_pred HHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCC
Q 048013 155 AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHR 203 (216)
Q Consensus 155 ~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 203 (216)
.+.+.++. .++++|+++|++|+...+..++++++++|+++.+|....
T Consensus 224 ~~~i~~~~--~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 270 (351)
T cd08285 224 VEQILKLT--GGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGE 270 (351)
T ss_pred HHHHHHHh--CCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCC
Confidence 55555542 456899999999987788999999999999999997554
No 35
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=99.96 E-value=3.2e-28 Score=200.44 Aligned_cols=189 Identities=24% Similarity=0.352 Sum_probs=149.1
Q ss_pred CCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcchhhHHHHH
Q 048013 7 KTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVH 86 (216)
Q Consensus 7 ~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~a~~ 86 (216)
+.|++||||++.+...|+ |..| +..++|.+..+.+. ..+|+|+||+.+|+++++++|+++++++|+++.+++++|+
T Consensus 76 ~~~~vGdrV~~~~~~~~~-~~~~--~~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~~~~~~~a~~ 151 (341)
T cd08237 76 GTYKVGTKVVMVPNTPVE-KDEI--IPENYLPSSRFRSS-GYDGFMQDYVFLPPDRLVKLPDNVDPEVAAFTELVSVGVH 151 (341)
T ss_pred CccCCCCEEEECCCCCch-hccc--chhccCCCcceeEe-cCCCceEEEEEEchHHeEECCCCCChHHhhhhchHHHHHH
Confidence 469999999998887777 4455 45678887665554 3469999999999999999999999999998889999999
Q ss_pred HHHH---cCCCCCCEEEEEcCCHHHHHHHHHHHH-cCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHH
Q 048013 87 ACRR---ANIGPETNVLIMGSGPIGLVTMLAARA-FGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQ 162 (216)
Q Consensus 87 ~l~~---~~~~~~~~vlv~Gag~~G~~~i~~a~~-~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 162 (216)
+++. ..++++++|+|+|+|++|++++|+++. +|..+|++++++++|++.+++++....+ . ++.
T Consensus 152 a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~------~-------~~~ 218 (341)
T cd08237 152 AISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLI------D-------DIP 218 (341)
T ss_pred HHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeeh------h-------hhh
Confidence 9853 346889999999999999999999986 6654689999999999998875543211 0 111
Q ss_pred HHcCCCccEEEEcCCC---HHHHHHHHHHhhcCCEEEEeccCCCCCcccchhhhh
Q 048013 163 KAMGTGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAA 214 (216)
Q Consensus 163 ~~~~~~~d~vi~~~g~---~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~ 214 (216)
...++|++||++|+ +..+..++++++++|+++++|+...+.++++..++.
T Consensus 219 --~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~ 271 (341)
T cd08237 219 --EDLAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEYPVPINTRMVLE 271 (341)
T ss_pred --hccCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCCCcccCHHHHhh
Confidence 12369999999994 456789999999999999999865555666555443
No 36
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=99.96 E-value=2.7e-28 Score=185.06 Aligned_cols=176 Identities=30% Similarity=0.433 Sum_probs=154.2
Q ss_pred CCCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcc-h
Q 048013 1 KVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMC-E 79 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~-~ 79 (216)
++|++|+++++||||... +.+|.|+|++.+|...+.++|+.+++.+++.+ .
T Consensus 78 AvG~gvtdrkvGDrVayl----------------------------~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~ll 129 (336)
T KOG1197|consen 78 AVGEGVTDRKVGDRVAYL----------------------------NPFGAYAEEVTVPSVKVFKVPEAITLKEAAALLL 129 (336)
T ss_pred EecCCccccccccEEEEe----------------------------ccchhhheeccccceeeccCCcccCHHHHHHHHH
Confidence 479999999999999875 46799999999999999999999999998854 4
Q ss_pred hhHHHHHHH-HHcCCCCCCEEEEEc-CCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHH
Q 048013 80 PLSVGVHAC-RRANIGPETNVLIMG-SGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEE 157 (216)
Q Consensus 80 ~~~~a~~~l-~~~~~~~~~~vlv~G-ag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 157 (216)
-..|||..+ +..++++|++|||+. +|++|+++.|+++..|++ +|.+..+.+|.+.+++.|+++.++++ .+|+.+.
T Consensus 130 q~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a~-tI~~asTaeK~~~akenG~~h~I~y~--~eD~v~~ 206 (336)
T KOG1197|consen 130 QGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGAH-TIATASTAEKHEIAKENGAEHPIDYS--TEDYVDE 206 (336)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCcE-EEEEeccHHHHHHHHhcCCcceeecc--chhHHHH
Confidence 777999888 557899999999997 599999999999999996 88888999999999999999988864 4788888
Q ss_pred HHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCCCC-cccch
Q 048013 158 VEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREM-TVPLT 210 (216)
Q Consensus 158 ~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~ 210 (216)
+.++ ++|+|+|+++|.+|. +.+...+.+|++.|.++.+|+.+... ++++.
T Consensus 207 V~ki--TngKGVd~vyDsvG~-dt~~~sl~~Lk~~G~mVSfG~asgl~~p~~l~ 257 (336)
T KOG1197|consen 207 VKKI--TNGKGVDAVYDSVGK-DTFAKSLAALKPMGKMVSFGNASGLIDPIPLN 257 (336)
T ss_pred HHhc--cCCCCceeeeccccc-hhhHHHHHHhccCceEEEeccccCCCCCeehh
Confidence 8777 479999999999999 88899999999999999999876532 44443
No 37
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=99.96 E-value=3.7e-27 Score=194.65 Aligned_cols=203 Identities=30% Similarity=0.581 Sum_probs=169.1
Q ss_pred CCCCCC--CCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCC-CCCCccceeEEecCC-ceEECCCCCCchhhhc
Q 048013 2 VGSEVK--TLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSP-PVHGCLANQVVHPAD-LCFKLPDNVSLEEGAM 77 (216)
Q Consensus 2 vG~~v~--~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~-~~~~ip~~~~~~~aa~ 77 (216)
+|+.|+ .|++||+|+..+..+|++|..|+.+.++.|.....+|.. ...|+|++|+.++++ .++++|+++++++++.
T Consensus 77 vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~ 156 (350)
T cd08256 77 LGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAIL 156 (350)
T ss_pred eCCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHhh
Confidence 688888 899999999999999999999999999999866544441 246999999999988 5789999999988886
Q ss_pred chhhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHH
Q 048013 78 CEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEE 157 (216)
Q Consensus 78 ~~~~~~a~~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 157 (216)
+.++.++|++++..+++++++++|.|+|++|++++++|+.+|+.+++++++++++.+.++++|++.+++.+ ..++.+.
T Consensus 157 ~~~~~ta~~a~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~--~~~~~~~ 234 (350)
T cd08256 157 IEPLACALHAVDRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPP--EVDVVEK 234 (350)
T ss_pred hhHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEecCC--CcCHHHH
Confidence 67888999998778899999999977899999999999999987788889999999999999998776643 2355555
Q ss_pred HHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCCCCccc
Q 048013 158 VEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVP 208 (216)
Q Consensus 158 ~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~ 208 (216)
+.++ +.+.++|++||++|+...+...+++++++|+++.+|.......++
T Consensus 235 ~~~~--~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~ 283 (350)
T cd08256 235 IKEL--TGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPVTVD 283 (350)
T ss_pred HHHH--hCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCCCccC
Confidence 5554 245689999999997567788999999999999998644433333
No 38
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=99.96 E-value=2.3e-27 Score=194.65 Aligned_cols=201 Identities=25% Similarity=0.405 Sum_probs=168.1
Q ss_pred CCCCCCCCCCCCEEEEcC-CcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcch-
Q 048013 2 VGSEVKTLVPGDRVALEP-GISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCE- 79 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~-~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~- 79 (216)
+|++++.+++||+|++.+ ...|++|..|..|+++.|......+. ...|+|++|+.++...++++|+++++++++.+.
T Consensus 69 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~-~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~ 147 (333)
T cd08296 69 VGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGV-TRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLC 147 (333)
T ss_pred ECCCCccCCCCCEEEeccccCCCCCChhhhCcCcccCCCCCccCc-ccCCcceeEEEEchhheEeCCCCCCHHHhhhhhh
Confidence 688888899999998754 56899999999999999998876655 346999999999999999999999998888554
Q ss_pred hhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHH
Q 048013 80 PLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVE 159 (216)
Q Consensus 80 ~~~~a~~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 159 (216)
++.++|++++...+.++++|+|+|+|++|++++++|+.+|++ ++++++++++++.++++|++.++++.. .++.+.+.
T Consensus 148 ~~~ta~~~~~~~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~~-vi~~~~~~~~~~~~~~~g~~~~i~~~~--~~~~~~~~ 224 (333)
T cd08296 148 AGVTTFNALRNSGAKPGDLVAVQGIGGLGHLAVQYAAKMGFR-TVAISRGSDKADLARKLGAHHYIDTSK--EDVAEALQ 224 (333)
T ss_pred hhHHHHHHHHhcCCCCCCEEEEECCcHHHHHHHHHHHHCCCe-EEEEeCChHHHHHHHHcCCcEEecCCC--ccHHHHHH
Confidence 677889998766889999999999999999999999999995 889999999999999999988776432 34444444
Q ss_pred HHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCCCCcccchh
Q 048013 160 KIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTP 211 (216)
Q Consensus 160 ~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~ 211 (216)
++ +++|+++|++|....+...+++++++|+++.+|......+++...
T Consensus 225 ~~-----~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~ 271 (333)
T cd08296 225 EL-----GGAKLILATAPNAKAISALVGGLAPRGKLLILGAAGEPVAVSPLQ 271 (333)
T ss_pred hc-----CCCCEEEECCCchHHHHHHHHHcccCCEEEEEecCCCCCCcCHHH
Confidence 32 369999999986678889999999999999999765545555443
No 39
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=99.96 E-value=1.8e-27 Score=197.08 Aligned_cols=203 Identities=21% Similarity=0.312 Sum_probs=159.9
Q ss_pred CCCCCCCCCCCCCEEEEcCCc-CCCCCcchhCCCCCCCCCCCCC-------CCCCCCCccceeEEecCCceEECCCCCCc
Q 048013 1 KVGSEVKTLVPGDRVALEPGI-SCWQCDYCKGGRYNLCPESKGL-------GSPPVHGCLANQVVHPADLCFKLPDNVSL 72 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~~-~~~~c~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~ 72 (216)
++|++|+.|++||+|++.+.. +|++|..|+.+++++|.+.... |. ..+|+|+||+.+|...++++|+++++
T Consensus 77 ~vG~~v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~ 155 (357)
T PLN02514 77 EVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGK-PTQGGFASAMVVDQKFVVKIPEGMAP 155 (357)
T ss_pred EECCCcccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCc-cCCCccccEEEEchHHeEECCCCCCH
Confidence 368889999999999876543 7999999999999999875321 11 24699999999999999999999999
Q ss_pred hhhhcch-hhHHHHHHHHH-cCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHH-HHHcCCCEEEeCCC
Q 048013 73 EEGAMCE-PLSVGVHACRR-ANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKKLGADNIVKVST 149 (216)
Q Consensus 73 ~~aa~~~-~~~~a~~~l~~-~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~-~~~~g~~~~~~~~~ 149 (216)
++++.+. .+.++|+++.. ...+++++++|+|+|++|++++|+|+.+|++ +++++.++++++. ++++|++.+++..+
T Consensus 156 ~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~~-vi~~~~~~~~~~~~~~~~Ga~~~i~~~~ 234 (357)
T PLN02514 156 EQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHH-VTVISSSDKKREEALEHLGADDYLVSSD 234 (357)
T ss_pred HHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHhcCCcEEecCCC
Confidence 9988654 66789999855 4457899999999999999999999999996 7777777766654 46799987655321
Q ss_pred CcccHHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCCCCcccchhhhh
Q 048013 150 NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAA 214 (216)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~ 214 (216)
. +.+.+. . .++|++||++|....+..++++++++|+++.+|......++++..++.
T Consensus 235 --~---~~~~~~---~-~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~ 290 (357)
T PLN02514 235 --A---AEMQEA---A-DSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMLML 290 (357)
T ss_pred --h---HHHHHh---c-CCCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCCCcccHHHHhh
Confidence 1 223332 2 379999999997677889999999999999999765555565555543
No 40
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=99.96 E-value=2.5e-27 Score=198.64 Aligned_cols=198 Identities=24% Similarity=0.269 Sum_probs=166.4
Q ss_pred CCCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcc-h
Q 048013 1 KVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMC-E 79 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~-~ 79 (216)
++|++++.+++||+|+..+...|++|+.|..+..++|.+...+|....+|+|++|+.++...++++|+++++++++.+ .
T Consensus 95 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~~~aa~l~~ 174 (393)
T cd08246 95 AVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEEAAAYML 174 (393)
T ss_pred EeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCHHHHhhhcc
Confidence 368889899999999999999999999999999999998777776556799999999999999999999999988744 5
Q ss_pred hhHHHHHHHHH---cCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCc----
Q 048013 80 PLSVGVHACRR---ANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNL---- 151 (216)
Q Consensus 80 ~~~~a~~~l~~---~~~~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~---- 151 (216)
++.+||+++.. .+++++++++|+|+ |++|++++++|+.+|++ +++++.++++.+.++++|++.+++.+..+
T Consensus 175 ~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~-vv~~~~s~~~~~~~~~~G~~~~i~~~~~~~~~~ 253 (393)
T cd08246 175 VGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGAN-PVAVVSSEEKAEYCRALGAEGVINRRDFDHWGV 253 (393)
T ss_pred cHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCe-EEEEeCCHHHHHHHHHcCCCEEEcccccccccc
Confidence 88899999843 57889999999996 99999999999999996 77888899999999999998877653211
Q ss_pred ----------------ccHHHHHHHHHHHcCC-CccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCC
Q 048013 152 ----------------QDIAEEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 152 ----------------~~~~~~~~~~~~~~~~-~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
..+.+.+.++ +.+. ++|++||++|+ ..+...+++++++|+++.+|...
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~v~~l--~~~~~g~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~ 318 (393)
T cd08246 254 LPDVNSEAYTAWTKEARRFGKAIWDI--LGGREDPDIVFEHPGR-ATFPTSVFVCDRGGMVVICAGTT 318 (393)
T ss_pred cccccchhhhhhhhccchHHHHHHHH--hCCCCCCeEEEECCch-HhHHHHHHHhccCCEEEEEcccC
Confidence 0133344444 2455 79999999998 67888999999999999998643
No 41
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=99.96 E-value=4.3e-27 Score=193.36 Aligned_cols=194 Identities=30% Similarity=0.543 Sum_probs=167.2
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcch-h
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCE-P 80 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~-~ 80 (216)
+|++|+.+++||+|+..+..+|++|..|..|+.++|++....+. +.+|+|++|+.+++++++++|+++++++++.+. .
T Consensus 72 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~ 150 (340)
T cd05284 72 VGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGI-GTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADA 150 (340)
T ss_pred eCCCCCcCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCc-cCCCcceeeEEecHHHeEECCCCCCHHHhhhhcch
Confidence 68888899999999999989999999999999999999988877 568999999999999999999999999888654 6
Q ss_pred hHHHHHHHHH--cCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHH
Q 048013 81 LSVGVHACRR--ANIGPETNVLIMGSGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEE 157 (216)
Q Consensus 81 ~~~a~~~l~~--~~~~~~~~vlv~Gag~~G~~~i~~a~~~g-~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 157 (216)
+.+||+++.. ..+.++++++|+|+|++|++++++|+.+| .+ |+++++++++.+.++++|.+.+++++. . +.+.
T Consensus 151 ~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~--~-~~~~ 226 (340)
T cd05284 151 GLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPAT-VIAVDRSEEALKLAERLGADHVLNASD--D-VVEE 226 (340)
T ss_pred HHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCCc-EEEEeCCHHHHHHHHHhCCcEEEcCCc--c-HHHH
Confidence 7899999854 35788999999998889999999999999 65 888888889999999999988776432 2 5555
Q ss_pred HHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCC
Q 048013 158 VEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 158 ~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
++++ ..+.++|+++|++|+.......+++++++|+++.+|...
T Consensus 227 i~~~--~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~ 269 (340)
T cd05284 227 VREL--TGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGG 269 (340)
T ss_pred HHHH--hCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCC
Confidence 5554 245689999999997677899999999999999999654
No 42
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=99.96 E-value=6.6e-27 Score=192.45 Aligned_cols=204 Identities=33% Similarity=0.618 Sum_probs=168.2
Q ss_pred CCCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcchh
Q 048013 1 KVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEP 80 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~ 80 (216)
++|++++.+++||+|+..+..+|++|+.|..+++++|....+.+. +.+|+|++|+.++...++++|+++++.+++.+.+
T Consensus 71 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~~~ 149 (341)
T PRK05396 71 EVGSEVTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGV-NRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIFDP 149 (341)
T ss_pred EeCCCCCcCCCCCEEEECCCCCCCCChhhhCcChhhCCCcceeee-cCCCcceeeEEechHHeEECcCCCCHHHhHhhhH
Confidence 368889999999999999999999999999999999987655443 4579999999999999999999999988887667
Q ss_pred hHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHH
Q 048013 81 LSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEK 160 (216)
Q Consensus 81 ~~~a~~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 160 (216)
+.+++.++.. ...++++++|.|+|++|++++++|+.+|+++++++++++++.++++++|++.+++++ ..++.+.+.+
T Consensus 150 ~~~~~~~~~~-~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~--~~~~~~~~~~ 226 (341)
T PRK05396 150 FGNAVHTALS-FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVA--KEDLRDVMAE 226 (341)
T ss_pred HHHHHHHHHc-CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCc--cccHHHHHHH
Confidence 7777665532 346899999988899999999999999996578888888999999999998877653 2355555555
Q ss_pred HHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCCCCcccch
Q 048013 161 IQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLT 210 (216)
Q Consensus 161 ~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~ 210 (216)
+ ..++++|++||++|....++..+++++++|+++.+|......++++.
T Consensus 227 ~--~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~ 274 (341)
T PRK05396 227 L--GMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMAIDWN 274 (341)
T ss_pred h--cCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCcccHH
Confidence 4 24678999999999867789999999999999999976554444443
No 43
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=99.96 E-value=1e-26 Score=193.07 Aligned_cols=206 Identities=29% Similarity=0.459 Sum_probs=167.2
Q ss_pred CCCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCC----------------------CCCCCccceeEEe
Q 048013 1 KVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGS----------------------PPVHGCLANQVVH 58 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~----------------------~~~~g~~~~~~~~ 58 (216)
++|+++..+++||+|++.+. .|++|.+|+.++.++|.+...... ....|+|++|+.+
T Consensus 69 ~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v 147 (365)
T cd08278 69 AVGSAVTGLKPGDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVV 147 (365)
T ss_pred EeCCCcccCCCCCEEEEccc-CCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEe
Confidence 36888889999999998764 899999999999999986532210 0124899999999
Q ss_pred cCCceEECCCCCCchhhhcch-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH
Q 048013 59 PADLCFKLPDNVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA 136 (216)
Q Consensus 59 ~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~ 136 (216)
++..++++|+++++++++.+. .+.+++.++ +...++++++++|+|+|++|++++++|+.+|+..++++++++++.+.+
T Consensus 148 ~~~~~~~iP~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~ 227 (365)
T cd08278 148 HERNVVKVDKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELA 227 (365)
T ss_pred cchhEEECCCCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH
Confidence 999999999999998887553 677888877 567789999999998899999999999999997689999999999999
Q ss_pred HHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCC--CCCcccchhh
Q 048013 137 KKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH--REMTVPLTPA 212 (216)
Q Consensus 137 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~ 212 (216)
+++|++.+++++ ..++.+.+.++ + +.++|+++|++|....+..++++++++|+++.+|... ....+++..+
T Consensus 228 ~~~g~~~~i~~~--~~~~~~~v~~~--~-~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~ 300 (365)
T cd08278 228 KELGATHVINPK--EEDLVAAIREI--T-GGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDL 300 (365)
T ss_pred HHcCCcEEecCC--CcCHHHHHHHH--h-CCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHH
Confidence 999998877643 24555555554 2 6689999999997677899999999999999999642 2344555443
No 44
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=99.95 E-value=2.7e-26 Score=191.92 Aligned_cols=200 Identities=32% Similarity=0.548 Sum_probs=163.0
Q ss_pred CCCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCC---------------CC----CCCCCccceeEEecCC
Q 048013 1 KVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGL---------------GS----PPVHGCLANQVVHPAD 61 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~---------------~~----~~~~g~~~~~~~~~~~ 61 (216)
++|++++.+++||+|+..+..+|++|++|+.++++.|++.... +. ...+|+|++|+.+++.
T Consensus 68 ~vG~~v~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~ 147 (386)
T cd08283 68 EVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFA 147 (386)
T ss_pred EeCCCCCCCCCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccc
Confidence 4788999999999999998889999999999999999875321 11 1136899999999988
Q ss_pred --ceEECCCCCCchhhhcch-hhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHH
Q 048013 62 --LCFKLPDNVSLEEGAMCE-PLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKK 138 (216)
Q Consensus 62 --~~~~ip~~~~~~~aa~~~-~~~~a~~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~ 138 (216)
.++++|+++++++++.+. .+.++|++++...+.++++|+|+|+|++|++++++|+..|+..++++++++++.+.+++
T Consensus 148 ~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~ 227 (386)
T cd08283 148 DVGPFKIPDDLSDEKALFLSDILPTGYHAAELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARS 227 (386)
T ss_pred cCeEEECCCCCCHHHHhhhccchhhhHHHHhhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH
Confidence 899999999999988654 77899999977788999999999989999999999999998568999999999999998
Q ss_pred cCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEEcCCC---------------------HHHHHHHHHHhhcCCEEEE
Q 048013 139 LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGF---------------------NKTMSTALSATRAGGKVCL 197 (216)
Q Consensus 139 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~---------------------~~~~~~~~~~l~~~G~~v~ 197 (216)
++...++++.. ..++.+.+.++ +.++++|++||++|+ ...+..++++++++|+++.
T Consensus 228 ~~~~~vi~~~~-~~~~~~~l~~~--~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~ 304 (386)
T cd08283 228 HLGAETINFEE-VDDVVEALREL--TGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSI 304 (386)
T ss_pred cCCcEEEcCCc-chHHHHHHHHH--cCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEE
Confidence 84445555432 11355555554 245689999999975 2367889999999999999
Q ss_pred eccCCC
Q 048013 198 VGMGHR 203 (216)
Q Consensus 198 ~g~~~~ 203 (216)
+|....
T Consensus 305 ~g~~~~ 310 (386)
T cd08283 305 IGVYGG 310 (386)
T ss_pred EcCCCC
Confidence 996543
No 45
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=99.95 E-value=1.5e-26 Score=194.20 Aligned_cols=198 Identities=23% Similarity=0.256 Sum_probs=164.0
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcch-h
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCE-P 80 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~-~ 80 (216)
+|++++.+++||+|++.+...|++|++|+.+++++|......|.....|+|+||+.+++..++++|+++++++++.+. +
T Consensus 92 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~~~~aa~~~~~ 171 (398)
T TIGR01751 92 VGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWEEAACPGLT 171 (398)
T ss_pred eCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCCHHHHhhccch
Confidence 688888999999999999999999999999999999876555544457999999999999999999999998888554 7
Q ss_pred hHHHHHHHH---HcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCc-----
Q 048013 81 LSVGVHACR---RANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNL----- 151 (216)
Q Consensus 81 ~~~a~~~l~---~~~~~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~----- 151 (216)
+.++|+++. ..++.++++++|+|+ |++|++++++|+.+|++ +++++.++++.+.++++|++.+++.+..+
T Consensus 172 ~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~-vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~ 250 (398)
T TIGR01751 172 GATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGN-PVAVVSSPEKAEYCRELGAEAVIDRNDFGHWGRL 250 (398)
T ss_pred HHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCe-EEEEcCCHHHHHHHHHcCCCEEecCCCcchhhcc
Confidence 788999874 367889999999997 99999999999999996 77788888899999999999888753210
Q ss_pred ---------------ccHHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCC
Q 048013 152 ---------------QDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHR 203 (216)
Q Consensus 152 ---------------~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 203 (216)
..+.+.+.++ +.++++|++|||+|. ..+...+++++++|+++.+|....
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~ 314 (398)
T TIGR01751 251 PDLNTQAPKEWTKSFKRFGKRIREL--TGGEDPDIVFEHPGR-ATFPTSVFVCRRGGMVVICGGTTG 314 (398)
T ss_pred ccccccccchhhhcchhHHHHHHHH--cCCCCceEEEECCcH-HHHHHHHHhhccCCEEEEEccccC
Confidence 0122223333 245789999999997 678889999999999999997543
No 46
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=99.95 E-value=3e-26 Score=188.63 Aligned_cols=197 Identities=34% Similarity=0.572 Sum_probs=164.4
Q ss_pred CCCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCC---CCCCCCccceeEEecCC--ceEECCCCCCchhh
Q 048013 1 KVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLG---SPPVHGCLANQVVHPAD--LCFKLPDNVSLEEG 75 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~a 75 (216)
++|++|+.+++||+|+..+..+|++|.+|..++.+.|++...+| ....+|+|++|+.+++. .++++|++++++++
T Consensus 67 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a 146 (344)
T cd08284 67 EVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAA 146 (344)
T ss_pred eeCCCccccCCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHh
Confidence 36888999999999999888999999999999999998765542 22346999999999975 99999999999888
Q ss_pred hcc-hhhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccH
Q 048013 76 AMC-EPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDI 154 (216)
Q Consensus 76 a~~-~~~~~a~~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 154 (216)
+.+ ..+.++|++++...+.++++|+|+|+|++|++++++|+.+|+.+++++++++++.+.++++|... ++. ...++
T Consensus 147 ~~l~~~~~ta~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~-~~~--~~~~~ 223 (344)
T cd08284 147 LLLGDILPTGYFGAKRAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAEP-INF--EDAEP 223 (344)
T ss_pred hhhcCchHHHHhhhHhcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCeE-Eec--CCcCH
Confidence 854 47889999997778889999999998999999999999999745888888888988889999753 343 23455
Q ss_pred HHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCC
Q 048013 155 AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 155 ~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
.+.+.++. .++++|++||++++.......+++++++|+++.+|...
T Consensus 224 ~~~l~~~~--~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~ 269 (344)
T cd08284 224 VERVREAT--EGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHT 269 (344)
T ss_pred HHHHHHHh--CCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCC
Confidence 55565543 45789999999998678899999999999999999655
No 47
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=99.95 E-value=2.4e-26 Score=188.92 Aligned_cols=201 Identities=41% Similarity=0.680 Sum_probs=163.5
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCC----CCCCCccceeEEecCCceEECCCCCCchhhhc
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGS----PPVHGCLANQVVHPADLCFKLPDNVSLEEGAM 77 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~ 77 (216)
+|++|+.|++||+|+..+..+|++|.+|..|+.++|.....++. ...+|+|++|+.++++.++++|+++++++++.
T Consensus 68 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~ 147 (339)
T cd08232 68 VGPGVTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL 147 (339)
T ss_pred eCCCCCcCCCCCEEEEccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhh
Confidence 68888899999999999999999999999999999998654442 12469999999999999999999999999887
Q ss_pred chhhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHH
Q 048013 78 CEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEE 157 (216)
Q Consensus 78 ~~~~~~a~~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 157 (216)
..++.++|+++......++++|||.|+|.+|++++++|+.+|++.++++++++++.+.+++++.+.+++++. .+
T Consensus 148 ~~~~~~a~~~l~~~~~~~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~--~~---- 221 (339)
T cd08232 148 AEPLAVALHAVNRAGDLAGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLAR--DP---- 221 (339)
T ss_pred cchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCc--hh----
Confidence 668888999886554448999999888999999999999999855888888888888888999888776432 22
Q ss_pred HHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCCCCcccc
Q 048013 158 VEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPL 209 (216)
Q Consensus 158 ~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~ 209 (216)
+.++. ....++|+++|+++....++..+++|+++|+++.+|....+.++++
T Consensus 222 ~~~~~-~~~~~vd~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~~~~~~~ 272 (339)
T cd08232 222 LAAYA-ADKGDFDVVFEASGAPAALASALRVVRPGGTVVQVGMLGGPVPLPL 272 (339)
T ss_pred hhhhh-ccCCCccEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccCcH
Confidence 22222 1235699999999975678899999999999999985443333333
No 48
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=99.95 E-value=5.4e-26 Score=187.04 Aligned_cols=196 Identities=39% Similarity=0.693 Sum_probs=168.3
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCc-----eEECCCCCCchhhh
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADL-----CFKLPDNVSLEEGA 76 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-----~~~ip~~~~~~~aa 76 (216)
+|++++.+++||+|+..+..+|++|+.|..++.++|.+...++. ...|+|++|+.+++.. ++++|+++++.+++
T Consensus 68 ~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa 146 (343)
T cd08235 68 VGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGN-LYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAA 146 (343)
T ss_pred eCCCCCCCCCCCEEEEccCCCCCCChHHHCcCcccCCCcceecc-CCCCcceeeEEecccccccccEEECCCCCCHHHHH
Confidence 68888889999999999999999999999999999998776665 4569999999999999 99999999999988
Q ss_pred cchhhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHH
Q 048013 77 MCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAE 156 (216)
Q Consensus 77 ~~~~~~~a~~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 156 (216)
.+.++.++|++++..+++++++|+|+|+|++|++++++|+..|++.++++++++++.+.+++++.+.+++++ +.++.+
T Consensus 147 ~~~~~~~a~~~l~~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~--~~~~~~ 224 (343)
T cd08235 147 LVEPLACCINAQRKAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAA--EEDLVE 224 (343)
T ss_pred hhhHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCC--ccCHHH
Confidence 767888899999767899999999998899999999999999996578888888888888889988776643 345655
Q ss_pred HHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCC
Q 048013 157 EVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 157 ~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
.+.++ ..++++|+++|++++.......+++++++|+++.+|...
T Consensus 225 ~i~~~--~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~ 268 (343)
T cd08235 225 KVREL--TDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLP 268 (343)
T ss_pred HHHHH--hCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccC
Confidence 56554 245679999999998668889999999999999998543
No 49
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=99.95 E-value=4.4e-26 Score=187.81 Aligned_cols=196 Identities=31% Similarity=0.528 Sum_probs=165.0
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCC--ceEECCCCCCchhhhcch
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPAD--LCFKLPDNVSLEEGAMCE 79 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa~~~ 79 (216)
+|+++..+++||+|+..+...|++|+.|..|+.++|+++...+. ..+|+|++|+.+++. .++++|+++++++++.+.
T Consensus 69 ~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~ 147 (345)
T cd08260 69 VGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGF-THPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLG 147 (345)
T ss_pred ECCCCccCCCCCEEEECCCCCCCCCccccCcCcccCCCCccccc-CCCCcceeEEEcccccCceEECCCCCCHHHhhhhc
Confidence 57888889999999987778999999999999999998765554 237999999999985 899999999998888654
Q ss_pred -hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHH
Q 048013 80 -PLSVGVHAC-RRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEE 157 (216)
Q Consensus 80 -~~~~a~~~l-~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 157 (216)
++.++|+++ +..++.++++++|+|+|++|++++++|+.+|++ ++++++++++.+.++++|++.+++++. ..++.+.
T Consensus 148 ~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~~-vi~~~~~~~~~~~~~~~g~~~~i~~~~-~~~~~~~ 225 (345)
T cd08260 148 CRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGAR-VIAVDIDDDKLELARELGAVATVNASE-VEDVAAA 225 (345)
T ss_pred cchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCe-EEEEeCCHHHHHHHHHhCCCEEEcccc-chhHHHH
Confidence 778999998 567788999999999999999999999999996 888889999999999999988877532 1345555
Q ss_pred HHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCC
Q 048013 158 VEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHR 203 (216)
Q Consensus 158 ~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 203 (216)
+.++. .+ ++|++||++|........+++++++|+++.+|....
T Consensus 226 ~~~~~--~~-~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~ 268 (345)
T cd08260 226 VRDLT--GG-GAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLG 268 (345)
T ss_pred HHHHh--CC-CCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCC
Confidence 55442 34 899999999975778899999999999999996543
No 50
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=99.95 E-value=5.6e-26 Score=187.19 Aligned_cols=206 Identities=33% Similarity=0.561 Sum_probs=168.6
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCC--ceEECCCCCCchhhhcc-
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPAD--LCFKLPDNVSLEEGAMC- 78 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa~~- 78 (216)
+|++++.+++||+|+..+...|++|++|..+..+.|....+.......|+|++|+.++++ .++++|+++++.+++.+
T Consensus 69 ~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~ 148 (345)
T cd08286 69 VGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLS 148 (345)
T ss_pred eccCccccCCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhcc
Confidence 688888899999999998899999999999999888865442122346999999999987 89999999999888855
Q ss_pred hhhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHH
Q 048013 79 EPLSVGVHAC-RRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEE 157 (216)
Q Consensus 79 ~~~~~a~~~l-~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 157 (216)
..+.++|+++ +..++.++++++|+|+|++|++++|+++.+|..+++++++++++.+.++++|++.++++.. .++.+.
T Consensus 149 ~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--~~~~~~ 226 (345)
T cd08286 149 DILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAK--GDAIEQ 226 (345)
T ss_pred chhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceecccc--ccHHHH
Confidence 4677888875 5677899999999989999999999999999445888989999989999999988777532 345555
Q ss_pred HHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCCCCcccchh
Q 048013 158 VEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTP 211 (216)
Q Consensus 158 ~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~ 211 (216)
+.+++ .+.++|++||+++....+..+++.|+++|+++.+|......++++..
T Consensus 227 i~~~~--~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~ 278 (345)
T cd08286 227 VLELT--DGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKPVDLHLEK 278 (345)
T ss_pred HHHHh--CCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCCCCcCHHH
Confidence 55543 45689999999998778899999999999999999655444555444
No 51
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=99.95 E-value=7.5e-26 Score=185.87 Aligned_cols=200 Identities=41% Similarity=0.724 Sum_probs=167.3
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcchhh
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPL 81 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~ 81 (216)
+|++++.+++||+|+..+..+|++|..|+.++.++|......+. ...|+|++|+.++++ ++++|+++++++++.++++
T Consensus 68 ~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~~~~ 145 (337)
T cd08261 68 VGEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGV-HRDGGFAEYIVVPAD-ALLVPEGLSLDQAALVEPL 145 (337)
T ss_pred eCCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCeeee-cCCCcceeEEEechh-eEECCCCCCHHHhhhhchH
Confidence 67888889999999998888999999999999999965444333 236899999999999 9999999999998876777
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHH
Q 048013 82 SVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKI 161 (216)
Q Consensus 82 ~~a~~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 161 (216)
.+++++++..++.++++|||+|+|.+|.+++++|+.+|++ ++++.+++++.+.+++++.+.++++.. .++.+.+.++
T Consensus 146 ~~a~~~~~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~~-v~~~~~s~~~~~~~~~~g~~~v~~~~~--~~~~~~l~~~ 222 (337)
T cd08261 146 AIGAHAVRRAGVTAGDTVLVVGAGPIGLGVIQVAKARGAR-VIVVDIDDERLEFARELGADDTINVGD--EDVAARLREL 222 (337)
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCe-EEEECCCHHHHHHHHHhCCCEEecCcc--cCHHHHHHHH
Confidence 7888888777899999999998899999999999999995 888888899989999999888877543 4555566554
Q ss_pred HHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCCCCccc
Q 048013 162 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVP 208 (216)
Q Consensus 162 ~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~ 208 (216)
. .+.++|+++|++++...+..++++|+++|+++.+|.......++
T Consensus 223 ~--~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~~~~~ 267 (337)
T cd08261 223 T--DGEGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKGPVTFP 267 (337)
T ss_pred h--CCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCCCCccC
Confidence 2 45679999999988678899999999999999998655433333
No 52
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=99.95 E-value=4e-26 Score=188.03 Aligned_cols=198 Identities=34% Similarity=0.575 Sum_probs=165.6
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCC--CCCCCCccceeEEecCC--ceEECCCCCCchhhhc
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLG--SPPVHGCLANQVVHPAD--LCFKLPDNVSLEEGAM 77 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa~ 77 (216)
+|++++.+++||+|+..+..+|++|.+|..+...+|++..... ....+|+|++|++++++ .++++|+++++++++.
T Consensus 69 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~ 148 (347)
T cd05278 69 VGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALM 148 (347)
T ss_pred ECCCccccCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhh
Confidence 6889999999999999999999999999999999998765322 11246999999999987 8999999999998886
Q ss_pred ch-hhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHH
Q 048013 78 CE-PLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAE 156 (216)
Q Consensus 78 ~~-~~~~a~~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 156 (216)
++ ++.++|+++...+++++++|+|.|+|++|++++++|+.+|..+++++++++++.+.++++|.+.+++++. .++.+
T Consensus 149 l~~~~~ta~~~~~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~--~~~~~ 226 (347)
T cd05278 149 LSDILPTGFHGAELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKN--GDIVE 226 (347)
T ss_pred hcchhhheeehhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCc--chHHH
Confidence 54 7889999887678899999999888999999999999999745888888888888999999888776532 34555
Q ss_pred HHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCC
Q 048013 157 EVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHR 203 (216)
Q Consensus 157 ~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 203 (216)
.++++ ..++++|++||++++...+...+++|+++|+++.+|....
T Consensus 227 ~i~~~--~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 271 (347)
T cd05278 227 QILEL--TGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGK 271 (347)
T ss_pred HHHHH--cCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCC
Confidence 55554 2456899999999986678999999999999999985443
No 53
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.95 E-value=1e-25 Score=185.62 Aligned_cols=204 Identities=30% Similarity=0.542 Sum_probs=166.7
Q ss_pred CCCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCC--ceEECCCCCCchhhhc-
Q 048013 1 KVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPAD--LCFKLPDNVSLEEGAM- 77 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa~- 77 (216)
++|+++..+++||+|+..+..+|++|..|..+..++|.+....+. ..+|+|++|+.+|.. .++++|++++++.+..
T Consensus 67 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~ 145 (345)
T cd08287 67 EVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGA-FVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLP 145 (345)
T ss_pred EeCCCCCccCCCCEEEeccccCCCCChhhhCcCcccCCCCCcccC-CCCCceEEEEEcchhhCceEECCCCCChhhhhhh
Confidence 368888899999999986678899999999999999997766554 567999999999975 9999999998732211
Q ss_pred -----chhhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcc
Q 048013 78 -----CEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQ 152 (216)
Q Consensus 78 -----~~~~~~a~~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 152 (216)
...+.++++++....++++++++|.|+|++|++++++|+..|++.++++++++++.+.++++|++.++++.. .
T Consensus 146 ~~~~l~~~~~~a~~~~~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~--~ 223 (345)
T cd08287 146 SLLALSDVMGTGHHAAVSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERG--E 223 (345)
T ss_pred hhHhhhcHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCc--c
Confidence 135778899887778899999999888999999999999999976888888888888999999988877532 3
Q ss_pred cHHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCCCCcccc
Q 048013 153 DIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPL 209 (216)
Q Consensus 153 ~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~ 209 (216)
++.+.+.++ ..+.++|+++|++|+...+..++++++++|+++.+|......++++
T Consensus 224 ~~~~~i~~~--~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~ 278 (345)
T cd08287 224 EAVARVREL--TGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDV 278 (345)
T ss_pred cHHHHHHHh--cCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCCCccCH
Confidence 455555554 2456899999999987788999999999999999996554444444
No 54
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=99.95 E-value=9.4e-26 Score=185.59 Aligned_cols=200 Identities=35% Similarity=0.634 Sum_probs=167.0
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcchhh
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPL 81 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~ 81 (216)
+|++++.+++||+|+..+...|++|..|..+..++|+..+.++. ...|+|++|+.++++.++++|++++++.++...++
T Consensus 70 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~ 148 (340)
T TIGR00692 70 IGPGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGV-DTDGCFAEYAVVPAQNIWKNPKSIPPEYATIQEPL 148 (340)
T ss_pred ECCCCCcCCCCCEEEECCcCCCCCChhhhCcChhhCcCcceEee-cCCCcceeEEEeehHHcEECcCCCChHhhhhcchH
Confidence 68888899999999999999999999999999999998776654 35699999999999999999999998777766688
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHH
Q 048013 82 SVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKI 161 (216)
Q Consensus 82 ~~a~~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 161 (216)
.++++++ ....+++++++|.|+|++|++++++++.+|++.|+++++++++.+.++++|++.++++. ..++.+.+.++
T Consensus 149 ~~a~~~~-~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~--~~~~~~~l~~~ 225 (340)
T TIGR00692 149 GNAVHTV-LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPF--KEDVVKEVADL 225 (340)
T ss_pred HHHHHHH-HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEccc--ccCHHHHHHHh
Confidence 8888876 34467899999988899999999999999986577888888899999999997776642 24555555554
Q ss_pred HHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCCCCcc
Q 048013 162 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTV 207 (216)
Q Consensus 162 ~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~ 207 (216)
. .++++|+++|++++...+...+++|+++|+++.+|......++
T Consensus 226 ~--~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~ 269 (340)
T TIGR00692 226 T--DGEGVDVFLEMSGAPKALEQGLQAVTPGGRVSLLGLPPGKVTI 269 (340)
T ss_pred c--CCCCCCEEEECCCCHHHHHHHHHhhcCCCEEEEEccCCCCccc
Confidence 2 4578999999999767788999999999999999975443333
No 55
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=99.95 E-value=1.3e-25 Score=184.16 Aligned_cols=202 Identities=33% Similarity=0.597 Sum_probs=168.6
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcc-hh
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMC-EP 80 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~-~~ 80 (216)
+|++++.+++||+|+..+..+|++|++|..++.++|......+. ...|+|++|+.++.+.++++|+++++.+++.+ .+
T Consensus 71 ~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~ 149 (338)
T cd08254 71 VGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGL-GIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDA 149 (338)
T ss_pred ECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCcccc-ccCCcceeeEEechHHeEECCCCCCHHHhhhhcch
Confidence 68888899999999999999999999999999999976655555 45799999999999999999999999888855 58
Q ss_pred hHHHHHHHH-HcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHH
Q 048013 81 LSVGVHACR-RANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVE 159 (216)
Q Consensus 81 ~~~a~~~l~-~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 159 (216)
+.++|+++. ...+++++++||.|+|.+|++++++|+..|++ |++++.++++.+.++++|.+.++... .....+.+
T Consensus 150 ~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~~-V~~~~~s~~~~~~~~~~g~~~~~~~~--~~~~~~~~- 225 (338)
T cd08254 150 VLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGAA-VIAVDIKEEKLELAKELGADEVLNSL--DDSPKDKK- 225 (338)
T ss_pred HHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCCE-EEEEcCCHHHHHHHHHhCCCEEEcCC--CcCHHHHH-
Confidence 889999984 46689999999988899999999999999996 89999999999999999988776642 23444444
Q ss_pred HHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCCCCcccch
Q 048013 160 KIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLT 210 (216)
Q Consensus 160 ~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~ 210 (216)
+. ..++++|+++|+++.....+.++++|+++|+++.+|.......+++.
T Consensus 226 ~~--~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~ 274 (338)
T cd08254 226 AA--GLGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLTVDLS 274 (338)
T ss_pred HH--hcCCCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCCCccCHH
Confidence 22 35678999999999767889999999999999999975544444443
No 56
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=99.95 E-value=1.2e-25 Score=185.04 Aligned_cols=197 Identities=42% Similarity=0.723 Sum_probs=167.7
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcchhh
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPL 81 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~ 81 (216)
+|+++..|++||+|+..+...|.+|.+|..++++.|++...++. ...|+|++|+.+|++.++++|+++++++++.++++
T Consensus 67 ~g~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~~~~ 145 (343)
T cd08236 67 VGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGS-RRDGAFAEYVSVPARNLIKIPDHVDYEEAAMIEPA 145 (343)
T ss_pred ECCCCCcCCCCCEEEEcCCCCCCCChhHHCcChhhCCCcceEec-ccCCcccceEEechHHeEECcCCCCHHHHHhcchH
Confidence 57888889999999999888999999999999999988765554 35799999999999999999999999998877778
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHH
Q 048013 82 SVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKI 161 (216)
Q Consensus 82 ~~a~~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 161 (216)
.++|+++....++++++|+|+|+|.+|++++++|+.+|++.++++++++++.+.++++|.+.+++.+. .. .+.+.+.
T Consensus 146 ~ta~~~l~~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~--~~-~~~~~~~ 222 (343)
T cd08236 146 AVALHAVRLAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE--ED-VEKVREL 222 (343)
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcc--cc-HHHHHHH
Confidence 89999987777899999999988999999999999999965888888888888888899887776532 23 4444444
Q ss_pred HHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCCC
Q 048013 162 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHRE 204 (216)
Q Consensus 162 ~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~ 204 (216)
..++++|+++|++|....+..++++|+++|+++.+|...++
T Consensus 223 --~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~ 263 (343)
T cd08236 223 --TEGRGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGD 263 (343)
T ss_pred --hCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCC
Confidence 24567999999998867889999999999999999965443
No 57
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=99.95 E-value=1.5e-25 Score=185.08 Aligned_cols=197 Identities=29% Similarity=0.470 Sum_probs=164.9
Q ss_pred CCCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcc-h
Q 048013 1 KVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMC-E 79 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~-~ 79 (216)
++|++++.+++||+|+..+...|++|..|..++.+.|......+. ...|+|++|+.++.+.++++|+++++.+++.+ .
T Consensus 80 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~ 158 (350)
T cd08240 80 AVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGI-FQDGGYAEYVIVPHSRYLVDPGGLDPALAATLAC 158 (350)
T ss_pred eeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceee-eccCcceeeEEecHHHeeeCCCCCCHHHeehhhc
Confidence 368888899999999999999999999999999999987655554 35699999999999999999999999988854 4
Q ss_pred hhHHHHHHHHHc-CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHH
Q 048013 80 PLSVGVHACRRA-NIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEV 158 (216)
Q Consensus 80 ~~~~a~~~l~~~-~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 158 (216)
.+.+||++++.. ..+++++++|+|+|++|++++++|+.+|+++|++++.++++.+.++++|++.+++. ...++.+.+
T Consensus 159 ~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~ 236 (350)
T cd08240 159 SGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNG--SDPDAAKRI 236 (350)
T ss_pred hhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecC--CCccHHHHH
Confidence 778999998654 45688999999889999999999999999768888889999999999998776653 223444445
Q ss_pred HHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCC
Q 048013 159 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHR 203 (216)
Q Consensus 159 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 203 (216)
.+. .++++|++||++|.......++++|+++|+++.+|....
T Consensus 237 ~~~---~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~ 278 (350)
T cd08240 237 IKA---AGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGG 278 (350)
T ss_pred HHH---hCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCC
Confidence 443 233899999999976778999999999999999986544
No 58
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=99.95 E-value=1.8e-25 Score=185.57 Aligned_cols=197 Identities=35% Similarity=0.583 Sum_probs=163.5
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCC---------------CC----CCCCCccceeEEecCCc
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGL---------------GS----PPVHGCLANQVVHPADL 62 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~---------------~~----~~~~g~~~~~~~~~~~~ 62 (216)
+|++++.+++||+|+..+..+|++|.+|..++.+.|++...+ |. ....|+|++|+.++++.
T Consensus 68 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 147 (363)
T cd08279 68 VGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEAS 147 (363)
T ss_pred eCCCccccCCCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEecccc
Confidence 688888899999999999999999999999999999865310 00 01358999999999999
Q ss_pred eEECCCCCCchhhhcch-hhHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcC
Q 048013 63 CFKLPDNVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLG 140 (216)
Q Consensus 63 ~~~ip~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g 140 (216)
++++|+++++++++.+. .+.++|.++ +..++.++++++|+|+|++|++++++|+..|+++|+++++++++.+.++++|
T Consensus 148 ~~~lp~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g 227 (363)
T cd08279 148 VVKIDDDIPLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFG 227 (363)
T ss_pred EEECCCCCChHHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhC
Confidence 99999999998888655 667888876 5677899999999988999999999999999965888888999999889999
Q ss_pred CCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCC
Q 048013 141 ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
++.+++.+ ..++.+.+.++. .++++|+++|++++...+...+++++++|+++.+|...
T Consensus 228 ~~~vv~~~--~~~~~~~l~~~~--~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~ 285 (363)
T cd08279 228 ATHTVNAS--EDDAVEAVRDLT--DGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGP 285 (363)
T ss_pred CeEEeCCC--CccHHHHHHHHc--CCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCC
Confidence 87776642 335555555542 35679999999997677899999999999999998644
No 59
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=99.94 E-value=1.8e-25 Score=182.22 Aligned_cols=190 Identities=28% Similarity=0.492 Sum_probs=159.9
Q ss_pred CCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcchhhHHHHHHH
Q 048013 9 LVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHAC 88 (216)
Q Consensus 9 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l 88 (216)
+++||||...+..+|++|.+|..+.+++|.+....+....+|+|++|+.++++.++++|++++.++++.+.++.++++.+
T Consensus 69 ~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~~~~~~ 148 (319)
T cd08242 69 ELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFAEPLAAALEIL 148 (319)
T ss_pred CCCCCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhhhHHHHHHHHH
Confidence 78999999999999999999999999999887665543357999999999999999999999998888656666778777
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCC
Q 048013 89 RRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTG 168 (216)
Q Consensus 89 ~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (216)
+..+++++++++|+|+|.+|++++|+|+.+|++ +++++.++++.+.++++|++.+++++.. +.+++
T Consensus 149 ~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~-------------~~~~~ 214 (319)
T cd08242 149 EQVPITPGDKVAVLGDGKLGLLIAQVLALTGPD-VVLVGRHSEKLALARRLGVETVLPDEAE-------------SEGGG 214 (319)
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCe-EEEEcCCHHHHHHHHHcCCcEEeCcccc-------------ccCCC
Confidence 888899999999999899999999999999996 8888889999999999999877654210 24568
Q ss_pred ccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCCCCcccchhh
Q 048013 169 IDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPA 212 (216)
Q Consensus 169 ~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~ 212 (216)
+|++||++|+...+...+++++++|+++..+.......+++..+
T Consensus 215 ~d~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~ 258 (319)
T cd08242 215 FDVVVEATGSPSGLELALRLVRPRGTVVLKSTYAGPASFDLTKA 258 (319)
T ss_pred CCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCccCHHHh
Confidence 99999999986778899999999999998876544445554443
No 60
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=99.94 E-value=2.1e-25 Score=182.24 Aligned_cols=195 Identities=29% Similarity=0.463 Sum_probs=159.8
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcch-h
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCE-P 80 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~-~ 80 (216)
+|++++.+++||+|+..+...|++|.+|..|+.++|.+...++. ...|+|++|+.+++..++++|+++++++++.+. .
T Consensus 69 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~ 147 (325)
T cd08264 69 VGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGV-VSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVA 147 (325)
T ss_pred ECCCCCCCCCCCEEEECCCcCCCCChhhcCCCccccCccceeec-cCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhh
Confidence 68889899999999999888999999999999999998766654 356899999999999999999999998888654 6
Q ss_pred hHHHHHHHHHcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHH
Q 048013 81 LSVGVHACRRANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVE 159 (216)
Q Consensus 81 ~~~a~~~l~~~~~~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 159 (216)
+.++|++++..+++++++++|+|+ |++|++++++|+.+|++ ++++++ .+.++++|++.+++.+ +..+.+.
T Consensus 148 ~~~a~~~l~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~-v~~~~~----~~~~~~~g~~~~~~~~----~~~~~l~ 218 (325)
T cd08264 148 ALTAYHALKTAGLGPGETVVVFGASGNTGIFAVQLAKMMGAE-VIAVSR----KDWLKEFGADEVVDYD----EVEEKVK 218 (325)
T ss_pred hHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCe-EEEEeH----HHHHHHhCCCeeecch----HHHHHHH
Confidence 678999987788999999999997 99999999999999996 777653 3666789987776532 2233344
Q ss_pred HHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCC-CCcccchh
Q 048013 160 KIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHR-EMTVPLTP 211 (216)
Q Consensus 160 ~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~ 211 (216)
++ . +++|++++++|+ ..+...+++|+++|+++.+|.... ...+++..
T Consensus 219 ~~---~-~~~d~vl~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~ 266 (325)
T cd08264 219 EI---T-KMADVVINSLGS-SFWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSD 266 (325)
T ss_pred HH---h-CCCCEEEECCCH-HHHHHHHHhhccCCEEEEEecCCCCCCccCHHH
Confidence 43 2 579999999998 678999999999999999986422 23444443
No 61
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.94 E-value=5e-25 Score=181.19 Aligned_cols=188 Identities=32% Similarity=0.505 Sum_probs=153.7
Q ss_pred CCCCCCCC-CCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcch
Q 048013 1 KVGSEVKT-LVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCE 79 (216)
Q Consensus 1 ~vG~~v~~-~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~ 79 (216)
++|++++. +++||+|+..+..+|++|+.|..|.. ....|+|++|+.+|.+.++++|++++++++++..
T Consensus 77 ~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~-----------~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~~~~ 145 (341)
T cd08262 77 DYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLS-----------PEAPGGYAEYMLLSEALLLRVPDGLSMEDAALTE 145 (341)
T ss_pred EeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCC-----------cCCCCceeeeEEechHHeEECCCCCCHHHhhhhh
Confidence 36888887 99999999999999999999943321 1246899999999999999999999999888656
Q ss_pred hhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcc--cHHHH
Q 048013 80 PLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQ--DIAEE 157 (216)
Q Consensus 80 ~~~~a~~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~ 157 (216)
++.++|+++...+++++++|+|+|+|++|.+++|+|+.+|++.++++++++++.+.++++|++.+++++.... .+. .
T Consensus 146 ~~~~a~~~~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~-~ 224 (341)
T cd08262 146 PLAVGLHAVRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWA-A 224 (341)
T ss_pred hHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHH-H
Confidence 7888998887788999999999988999999999999999976788888899999999999887776543211 111 2
Q ss_pred HHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCC
Q 048013 158 VEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 158 ~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
+.+. ..++++|++||++++...+..++++++++|+++.+|...
T Consensus 225 ~~~~--~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~ 267 (341)
T cd08262 225 ELAR--AGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCM 267 (341)
T ss_pred HHHH--hCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCC
Confidence 2222 245679999999998556788999999999999998653
No 62
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.94 E-value=3.8e-25 Score=182.06 Aligned_cols=195 Identities=36% Similarity=0.626 Sum_probs=162.7
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcchhh
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPL 81 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~ 81 (216)
+|++++.+++||+|+..+..+|+.|..|..+++++|...++.+. ...|+|++|+.++++.++++|++++++.+++..++
T Consensus 72 ~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~v~v~~~~~~~lP~~~~~~~a~~~~~~ 150 (341)
T cd05281 72 VGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGV-DTDGCFAEYVVVPEENLWKNDKDIPPEIASIQEPL 150 (341)
T ss_pred ECCCCCCCCCCCEEEECCccCCCCChHHHCcCcccCcccceEec-cCCCcceEEEEechHHcEECcCCCCHHHhhhhhHH
Confidence 57788889999999998889999999999999999987655554 35689999999999999999999998777776788
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHH
Q 048013 82 SVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKI 161 (216)
Q Consensus 82 ~~a~~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 161 (216)
.++++++. ...+++++++|+|+|++|++++++++.+|.++++++++++++.+.++++|.+.+++.+ ..++. .+.++
T Consensus 151 ~~a~~~~~-~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~-~~~~~ 226 (341)
T cd05281 151 GNAVHTVL-AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPR--EEDVV-EVKSV 226 (341)
T ss_pred HHHHHHHH-hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCcc--cccHH-HHHHH
Confidence 88888775 3457899999988899999999999999985578888888999999999988776542 23444 45554
Q ss_pred HHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCC
Q 048013 162 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHR 203 (216)
Q Consensus 162 ~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 203 (216)
. .++++|++||++|.......++++|+++|+++.+|....
T Consensus 227 ~--~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 266 (341)
T cd05281 227 T--DGTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPG 266 (341)
T ss_pred c--CCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCC
Confidence 2 457899999999986778899999999999999986544
No 63
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=99.94 E-value=4.8e-25 Score=181.07 Aligned_cols=201 Identities=30% Similarity=0.521 Sum_probs=163.2
Q ss_pred CCCCCCCCCCCCEEEEcC-CcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcch-
Q 048013 2 VGSEVKTLVPGDRVALEP-GISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCE- 79 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~-~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~- 79 (216)
+|++++.|++||+|+..+ ..+|++|+.|..+..++|.+....+. ..+|+|+||+.++.+.++++|+++++++++.+.
T Consensus 68 ~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~ 146 (338)
T PRK09422 68 VGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGY-TVDGGMAEQCIVTADYAVKVPEGLDPAQASSITC 146 (338)
T ss_pred ECCCCccCCCCCEEEEccCCCCCCCChhhcCCCcccCCCccccCc-cccCcceeEEEEchHHeEeCCCCCCHHHeehhhc
Confidence 678888899999998754 56899999999999999987655444 357999999999999999999999999888654
Q ss_pred hhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHH-cCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHH
Q 048013 80 PLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARA-FGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEV 158 (216)
Q Consensus 80 ~~~~a~~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~-~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 158 (216)
.+.++|++++...++++++++|+|+|++|++++++|+. +|++ ++++++++++++.++++|.+.+++... ..++.+.+
T Consensus 147 ~~~ta~~~~~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~~-v~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~v 224 (338)
T PRK09422 147 AGVTTYKAIKVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNAK-VIAVDINDDKLALAKEVGADLTINSKR-VEDVAKII 224 (338)
T ss_pred chhHHHHHHHhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCCe-EEEEeCChHHHHHHHHcCCcEEecccc-cccHHHHH
Confidence 67789999977889999999999999999999999998 5995 899999999999999999988776422 13444455
Q ss_pred HHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCCCCcccc
Q 048013 159 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPL 209 (216)
Q Consensus 159 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~ 209 (216)
++. .+ ++|.++.+.++...+..++++++++|+++.+|......++++
T Consensus 225 ~~~---~~-~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~ 271 (338)
T PRK09422 225 QEK---TG-GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPESMDLSI 271 (338)
T ss_pred HHh---cC-CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCCceecH
Confidence 543 34 689555555555788999999999999999997554444443
No 64
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=99.94 E-value=5.6e-25 Score=178.62 Aligned_cols=207 Identities=40% Similarity=0.713 Sum_probs=168.1
Q ss_pred CCCCCCCCCCCCEEEEcCC-cCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcchh
Q 048013 2 VGSEVKTLVPGDRVALEPG-ISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEP 80 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~-~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~ 80 (216)
+|++++.+++||+|+..+. .+|+.|++|..+..+.|...+.++. ...|+|++|+.++...++++|++++++++++..+
T Consensus 70 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~ 148 (306)
T cd08258 70 VGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGT-QADGGFAEYVLVPEESLHELPENLSLEAAALTEP 148 (306)
T ss_pred ECCCcCcCCCCCEEEEccCcCCCCCCcchhCcCcccCCCCceeee-cCCCceEEEEEcchHHeEECcCCCCHHHHHhhch
Confidence 6888889999999998764 6899999999999999987654443 3569999999999999999999999998886667
Q ss_pred hHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEE--cCChHHHHHHHHcCCCEEEeCCCCcccHHHH
Q 048013 81 LSVGVHAC-RRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIV--DVDDYRLSVAKKLGADNIVKVSTNLQDIAEE 157 (216)
Q Consensus 81 ~~~a~~~l-~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 157 (216)
+.++|+++ ....++++++++|.|+|++|++++++|+.+|++ |+++ ++++++.+.++++|++.+ ++ ...++.+.
T Consensus 149 ~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~~-v~~~~~~~~~~~~~~~~~~g~~~~-~~--~~~~~~~~ 224 (306)
T cd08258 149 LAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGAT-VVVVGTEKDEVRLDVAKELGADAV-NG--GEEDLAEL 224 (306)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCE-EEEECCCCCHHHHHHHHHhCCccc-CC--CcCCHHHH
Confidence 78899887 567889999999988899999999999999996 6665 345567788888998766 54 33566666
Q ss_pred HHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCC-CCcccchhhhhc
Q 048013 158 VEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHR-EMTVPLTPAAAS 215 (216)
Q Consensus 158 ~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~ 215 (216)
+.++. .++++|.+||++|+...+...++.|+++|+++.+|+... ...+++..+++|
T Consensus 225 l~~~~--~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~ 281 (306)
T cd08258 225 VNEIT--DGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQK 281 (306)
T ss_pred HHHHc--CCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhc
Confidence 65542 457899999999876778899999999999999998652 356666666543
No 65
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=99.94 E-value=6.3e-25 Score=180.50 Aligned_cols=200 Identities=26% Similarity=0.432 Sum_probs=162.2
Q ss_pred CCCCCCCCCCCCEEEEc-CCcCCCCCcchhCCCCCCCCCCCCCC------CCCCCCccceeEEecCCceEECCCCCCchh
Q 048013 2 VGSEVKTLVPGDRVALE-PGISCWQCDYCKGGRYNLCPESKGLG------SPPVHGCLANQVVHPADLCFKLPDNVSLEE 74 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~-~~~~~~~c~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~ 74 (216)
+|++++.|++||+|++. ....|++|.+|..++.++|+...... .....|+|+||+.++.+.++++|+++++++
T Consensus 68 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~ 147 (337)
T cd05283 68 VGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAA 147 (337)
T ss_pred ECCCCcccCCCCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHH
Confidence 68888999999999843 45589999999999999998765431 112468999999999999999999999998
Q ss_pred hhcch-hhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCccc
Q 048013 75 GAMCE-PLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQD 153 (216)
Q Consensus 75 aa~~~-~~~~a~~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 153 (216)
++.+. ...++|++++...++++++++|.|+|++|++++++++.+|++ ++++++++++.+.++++|++.+++... .+
T Consensus 148 aa~l~~~~~ta~~~~~~~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~~-v~~~~~~~~~~~~~~~~g~~~vi~~~~--~~ 224 (337)
T cd05283 148 AAPLLCAGITVYSPLKRNGVGPGKRVGVVGIGGLGHLAVKFAKALGAE-VTAFSRSPSKKEDALKLGADEFIATKD--PE 224 (337)
T ss_pred hhhhhhHHHHHHHHHHhcCCCCCCEEEEECCcHHHHHHHHHHHHcCCe-EEEEcCCHHHHHHHHHcCCcEEecCcc--hh
Confidence 88544 667899998777789999999988899999999999999995 888999989999999999887765321 12
Q ss_pred HHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCCCCcccchh
Q 048013 154 IAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTP 211 (216)
Q Consensus 154 ~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~ 211 (216)
. .+ ..++++|++||+++.......++++++++|+++.+|......++++..
T Consensus 225 ~---~~----~~~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~ 275 (337)
T cd05283 225 A---MK----KAAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFP 275 (337)
T ss_pred h---hh----hccCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCCCccCHHH
Confidence 1 11 135689999999998545789999999999999999765444455444
No 66
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=99.94 E-value=1.4e-24 Score=180.49 Aligned_cols=207 Identities=32% Similarity=0.518 Sum_probs=168.1
Q ss_pred CCCCCCC---CCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCC---------------------CCCCCccceeEE
Q 048013 2 VGSEVKT---LVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGS---------------------PPVHGCLANQVV 57 (216)
Q Consensus 2 vG~~v~~---~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~---------------------~~~~g~~~~~~~ 57 (216)
+|+++++ +++||+|+..+..+|++|.+|..++.++|++...+.. ....|+|++|+.
T Consensus 68 vG~~~~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 147 (367)
T cd08263 68 VGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAV 147 (367)
T ss_pred eCCCCCCCCcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEE
Confidence 6788877 9999999998889999999999999999997642100 013589999999
Q ss_pred ecCCceEECCCCCCchhhhcch-hhHHHHHHHH-HcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHH
Q 048013 58 HPADLCFKLPDNVSLEEGAMCE-PLSVGVHACR-RANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSV 135 (216)
Q Consensus 58 ~~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~l~-~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~ 135 (216)
++.+.++++|+++++.+++.+. ++.++|+++. ...+.++++++|+|+|++|++++++|+.+|++.+++++.++++.+.
T Consensus 148 ~~~~~~~~~P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~ 227 (367)
T cd08263 148 VPATALAPLPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAK 227 (367)
T ss_pred echhhEEECCCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHH
Confidence 9999999999999999888654 7889999984 4567899999999889999999999999999768888888888888
Q ss_pred HHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCC--CCcccchhh
Q 048013 136 AKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHR--EMTVPLTPA 212 (216)
Q Consensus 136 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~ 212 (216)
++++|++.+++.+ ..++.+.+.+.. .+.++|++||++++......++++++++|+++.+|.... ...+++.++
T Consensus 228 ~~~~g~~~v~~~~--~~~~~~~l~~~~--~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~ 302 (367)
T cd08263 228 AKELGATHTVNAA--KEDAVAAIREIT--GGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRL 302 (367)
T ss_pred HHHhCCceEecCC--cccHHHHHHHHh--CCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHH
Confidence 8899998877643 345555555542 467899999999995478899999999999999986543 234444444
No 67
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=99.94 E-value=1.7e-24 Score=178.10 Aligned_cols=196 Identities=32% Similarity=0.488 Sum_probs=166.4
Q ss_pred CCCCCCCCCCCCEEEEcC-CcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcc-h
Q 048013 2 VGSEVKTLVPGDRVALEP-GISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMC-E 79 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~-~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~-~ 79 (216)
+|++++.+++||+|+..+ ...|++|.+|..++.++|......+. ...|+|++|+.++++.++++|+++++.+++.+ .
T Consensus 71 vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~ 149 (341)
T cd08297 71 VGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGY-TVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLC 149 (341)
T ss_pred eCCCCCCCCCCCEEEEecCCCCCCCCccccCCCcccCCCcccccc-ccCCcceeEEEeccccEEECCCCCCHHHHHHHHc
Confidence 688888899999999875 57899999999999999988776665 45689999999999999999999999888854 4
Q ss_pred hhHHHHHHHHHcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHH
Q 048013 80 PLSVGVHACRRANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEV 158 (216)
Q Consensus 80 ~~~~a~~~l~~~~~~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 158 (216)
.+.++|++++..++++++++||+|+ +.+|++++++|+.+|++ ++++.+++++.+.++++|.+.++++.. .++.+.+
T Consensus 150 ~~~ta~~~~~~~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~~~~ 226 (341)
T cd08297 150 AGVTVYKALKKAGLKPGDWVVISGAGGGLGHLGVQYAKAMGLR-VIAIDVGDEKLELAKELGADAFVDFKK--SDDVEAV 226 (341)
T ss_pred chHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHcCCcEEEcCCC--ccHHHHH
Confidence 7778999987678899999999996 67999999999999995 889989999999888999988777532 3555555
Q ss_pred HHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCC
Q 048013 159 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHR 203 (216)
Q Consensus 159 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 203 (216)
.++. .++++|+++|+.+.......++++++++|+++.+|....
T Consensus 227 ~~~~--~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~ 269 (341)
T cd08297 227 KELT--GGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPG 269 (341)
T ss_pred HHHh--cCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCC
Confidence 5542 467899999988766888999999999999999996543
No 68
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=99.94 E-value=1.5e-24 Score=172.18 Aligned_cols=191 Identities=40% Similarity=0.676 Sum_probs=159.4
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcc-hh
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMC-EP 80 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~-~~ 80 (216)
+|++++.|++||+|+..+...|++|++|+. .|......+. ...|+|++|+.++.+.++++|+++++++++.+ .+
T Consensus 44 ~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~ 118 (271)
T cd05188 44 VGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LCPGGGILGE-GLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEP 118 (271)
T ss_pred ECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hCCCCCEecc-ccCCcceEEEEechHHeEECCCCCCHHHhhHhcCH
Confidence 678888999999999999999999999997 6776665444 45799999999999999999999999998876 58
Q ss_pred hHHHHHHHHHc-CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHH
Q 048013 81 LSVGVHACRRA-NIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVE 159 (216)
Q Consensus 81 ~~~a~~~l~~~-~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 159 (216)
+.++|++++.. .++++++++|+|+|++|++++++++..|.+ |+++++++++.+.+++++.+.+++.. ..+..+.+.
T Consensus 119 ~~~a~~~l~~~~~~~~~~~vli~g~~~~G~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~ 195 (271)
T cd05188 119 LATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLAKAAGAR-VIVTDRSDEKLELAKELGADHVIDYK--EEDLEEELR 195 (271)
T ss_pred HHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCe-EEEEcCCHHHHHHHHHhCCceeccCC--cCCHHHHHH
Confidence 89999998654 458999999999866999999999999974 89999999998999889887766532 234444343
Q ss_pred HHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCC
Q 048013 160 KIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHR 203 (216)
Q Consensus 160 ~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 203 (216)
...+.++|+++++++.....+..+++++++|+++.+|....
T Consensus 196 ---~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~ 236 (271)
T cd05188 196 ---LTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTSG 236 (271)
T ss_pred ---HhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCCC
Confidence 23567899999999986677889999999999999996554
No 69
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=99.94 E-value=1.4e-24 Score=182.95 Aligned_cols=199 Identities=24% Similarity=0.365 Sum_probs=150.3
Q ss_pred CCCCCCC-CCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCC----ceEECCCCCCchhh
Q 048013 1 KVGSEVK-TLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPAD----LCFKLPDNVSLEEG 75 (216)
Q Consensus 1 ~vG~~v~-~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~~ip~~~~~~~a 75 (216)
++|++|+ .|++||||++.+...|++|..|.. ++. ..+|+|+||+.+|++ .++++|++++++++
T Consensus 76 ~vG~~v~~~~~vGdrV~~~~~~~c~~~~~c~~-----------~g~-~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~a 143 (410)
T cd08238 76 KVGKKWQGKYKPGQRFVIQPALILPDGPSCPG-----------YSY-TYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEA 143 (410)
T ss_pred EeCCCccCCCCCCCEEEEcCCcCCCCCCCCCC-----------ccc-cCCCcceEEEEecHHhccCCeEECCCCCCHHHH
Confidence 4788998 699999999998889998887731 121 246999999999987 68999999999999
Q ss_pred hcchhhHHH---HHHH---------HHcCCCCCCEEEEEc-CCHHHHHHHHHHHHcCC--CeEEEEcCChHHHHHHHHc-
Q 048013 76 AMCEPLSVG---VHAC---------RRANIGPETNVLIMG-SGPIGLVTMLAARAFGA--PRIVIVDVDDYRLSVAKKL- 139 (216)
Q Consensus 76 a~~~~~~~a---~~~l---------~~~~~~~~~~vlv~G-ag~~G~~~i~~a~~~g~--~~vv~~~~~~~~~~~~~~~- 139 (216)
+++.+++++ ++++ +..+++++++|+|+| +|++|++++|+|+.+|+ .+|++++.++++++.++++
T Consensus 144 al~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~ 223 (410)
T cd08238 144 SLVEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLF 223 (410)
T ss_pred hhcchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhc
Confidence 877665544 3332 345688999999998 59999999999999754 4599999999999999886
Q ss_pred -------CCC-EEEeCCCCcccHHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEecc-CCC--CCccc
Q 048013 140 -------GAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM-GHR--EMTVP 208 (216)
Q Consensus 140 -------g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~-~~~--~~~~~ 208 (216)
|++ .++++. ...++.+.++++ +.+.++|++||++|....+..++++++++|+++.++. ... ..+++
T Consensus 224 ~~~~~~~Ga~~~~i~~~-~~~~~~~~v~~~--t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~~~ 300 (410)
T cd08238 224 PPEAASRGIELLYVNPA-TIDDLHATLMEL--TGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAPLN 300 (410)
T ss_pred cccccccCceEEEECCC-ccccHHHHHHHH--hCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCcccccc
Confidence 555 344432 123555556555 3567899999999987888999999999998877653 222 24555
Q ss_pred chhhhh
Q 048013 209 LTPAAA 214 (216)
Q Consensus 209 ~~~~~~ 214 (216)
+..+++
T Consensus 301 ~~~~~~ 306 (410)
T cd08238 301 FYNVHY 306 (410)
T ss_pred HHHhhh
Confidence 554443
No 70
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.94 E-value=2.2e-24 Score=176.76 Aligned_cols=194 Identities=40% Similarity=0.665 Sum_probs=164.1
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcchhh
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPL 81 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~ 81 (216)
+|++++.+++||+|+..+...|++|..|..++.++|.....++. +..|+|++|+.++.+.++++|+++++.+++.+.++
T Consensus 67 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~ 145 (334)
T cd08234 67 VGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGV-TRNGGFAEYVVVPAKQVYKIPDNLSFEEAALAEPL 145 (334)
T ss_pred eCCCCCCCCCCCEEEEcCCcCCCCCccccCcChhhCCCcceecc-CCCCcceeEEEecHHHcEECcCCCCHHHHhhhhHH
Confidence 68888889999999999889999999999999999988766544 35699999999999999999999999888866677
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHH
Q 048013 82 SVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKI 161 (216)
Q Consensus 82 ~~a~~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 161 (216)
.+++++++..+++++++++|+|+|.+|.+++++|+.+|+++++++++++++.+.+++++.+.+++++. .+..+. ..
T Consensus 146 ~~a~~~l~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~--~~ 221 (334)
T cd08234 146 SCAVHGLDLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSR--EDPEAQ--KE 221 (334)
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCC--CCHHHH--HH
Confidence 78888887788899999999988999999999999999965788888999999988899887666432 233222 22
Q ss_pred HHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCC
Q 048013 162 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 162 ~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
..++++|+++|+++........+++++++|+++.+|...
T Consensus 222 --~~~~~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~ 260 (334)
T cd08234 222 --DNPYGFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYA 260 (334)
T ss_pred --hcCCCCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCC
Confidence 346789999999987677889999999999999998644
No 71
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=99.94 E-value=3.3e-25 Score=180.09 Aligned_cols=176 Identities=20% Similarity=0.274 Sum_probs=134.5
Q ss_pred CCCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcchh
Q 048013 1 KVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEP 80 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~ 80 (216)
++|+++ .|++||||++.+ ..|..|.. ...|+|+||+.+|++.++++|++++++. +.+++
T Consensus 72 ~vG~~v-~~~vGdrV~~~~----~~c~~~~~---------------~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~~ 130 (308)
T TIGR01202 72 EAGPDT-GFRPGDRVFVPG----SNCYEDVR---------------GLFGGASKRLVTPASRVCRLDPALGPQG-ALLAL 130 (308)
T ss_pred EecCCC-CCCCCCEEEEeC----cccccccc---------------ccCCcccceEEcCHHHceeCCCCCCHHH-HhhhH
Confidence 367887 599999998742 23333211 1359999999999999999999998764 55567
Q ss_pred hHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHH
Q 048013 81 LSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEK 160 (216)
Q Consensus 81 ~~~a~~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 160 (216)
++++|++++.. ..++++++|+|+|++|++++|+|+.+|++.|++++.++++++.++++ .++++.+ .
T Consensus 131 ~~~a~~~~~~~-~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i~~~~---~------- 196 (308)
T TIGR01202 131 AATARHAVAGA-EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVLDPEK---D------- 196 (308)
T ss_pred HHHHHHHHHhc-ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---cccChhh---c-------
Confidence 78999999664 34688999999999999999999999998677788888777766543 2222110 0
Q ss_pred HHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCCCCcccchhhhhc
Q 048013 161 IQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTVPLTPAAAS 215 (216)
Q Consensus 161 ~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~ 215 (216)
.+.++|++||++|++..+..++++++++|+++++|+.....++++..++.|
T Consensus 197 ----~~~g~Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~ 247 (308)
T TIGR01202 197 ----PRRDYRAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTEPVNFDFVPAFMK 247 (308)
T ss_pred ----cCCCCCEEEECCCCHHHHHHHHHhhhcCcEEEEEeecCCCcccccchhhhc
Confidence 245799999999997778999999999999999998665566666665543
No 72
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=99.93 E-value=3.9e-24 Score=178.30 Aligned_cols=196 Identities=30% Similarity=0.511 Sum_probs=158.5
Q ss_pred CCCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCC---------CCCCCCCCccceeEEecCC--ceEECCCC
Q 048013 1 KVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKG---------LGSPPVHGCLANQVVHPAD--LCFKLPDN 69 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~---------~~~~~~~g~~~~~~~~~~~--~~~~ip~~ 69 (216)
++|++++.+++||+|+..+..+|+.|..|..++.++|.+... .+....+|+|++|+.+|.. .++++|++
T Consensus 67 ~vG~~v~~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~ 146 (375)
T cd08282 67 EVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDR 146 (375)
T ss_pred EeCCCCCcCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCC
Confidence 368888889999999999999999999999999999975311 1111346899999999976 89999999
Q ss_pred CCchh---hh-cchhhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEE
Q 048013 70 VSLEE---GA-MCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIV 145 (216)
Q Consensus 70 ~~~~~---aa-~~~~~~~a~~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~ 145 (216)
+++++ ++ +..++.++|++++...++++++|+|.|+|++|++++++++.+|+..++++++++++.+.++++|+. .+
T Consensus 147 ~~~~~~~~~a~~~~~~~ta~~a~~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~v 225 (375)
T cd08282 147 DGAKEKDDYLMLSDIFPTGWHGLELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAI-PI 225 (375)
T ss_pred CChhhhhheeeecchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCe-Ee
Confidence 99884 34 345788999999778889999999998899999999999999985588899999999999999984 34
Q ss_pred eCCCCcccHHHHHHHHHHHcCCCccEEEEcCCCHH-----------HHHHHHHHhhcCCEEEEeccCC
Q 048013 146 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNK-----------TMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~-----------~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
++ .++++.+.+.++. ++++|+++|++|... .+..++++++++|+++.+|...
T Consensus 226 ~~--~~~~~~~~i~~~~---~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~ 288 (375)
T cd08282 226 DF--SDGDPVEQILGLE---PGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYV 288 (375)
T ss_pred cc--CcccHHHHHHHhh---CCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccC
Confidence 43 2345555555542 357999999999742 4788899999999999888643
No 73
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=99.93 E-value=5.7e-25 Score=169.71 Aligned_cols=182 Identities=20% Similarity=0.276 Sum_probs=145.3
Q ss_pred CCCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcch-
Q 048013 1 KVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCE- 79 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~- 79 (216)
++|+++++|++||+|++.. ...|+|++|.+.+++.++++++.++.+.||.+.
T Consensus 91 ~vGs~vkgfk~Gd~VIp~~---------------------------a~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~V 143 (354)
T KOG0025|consen 91 AVGSNVKGFKPGDWVIPLS---------------------------ANLGTWRTEAVFSESDLIKVDKDIPLASAATLSV 143 (354)
T ss_pred EecCCcCccCCCCeEeecC---------------------------CCCccceeeEeecccceEEcCCcCChhhhheecc
Confidence 4789999999999999863 245999999999999999999999999999765
Q ss_pred hhHHHHHHHH-HcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHH----HHHHHHcCCCEEEeCCCCccc
Q 048013 80 PLSVGVHACR-RANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYR----LSVAKKLGADNIVKVSTNLQD 153 (216)
Q Consensus 80 ~~~~a~~~l~-~~~~~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~ 153 (216)
.-+|||+++. ..++.+|++|+-.|+ +++|+++||+|+++|++. +-+.|+... .+.++.+|+++++...+ .
T Consensus 144 NP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~Gikt-invVRdR~~ieel~~~Lk~lGA~~ViTeee---l 219 (354)
T KOG0025|consen 144 NPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKT-INVVRDRPNIEELKKQLKSLGATEVITEEE---L 219 (354)
T ss_pred CchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcce-EEEeecCccHHHHHHHHHHcCCceEecHHH---h
Confidence 4569999994 578999999999997 899999999999999974 444455433 34567799999986211 1
Q ss_pred HHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEec-cCCCCCcccchhhhhc
Q 048013 154 IAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG-MGHREMTVPLTPAAAS 215 (216)
Q Consensus 154 ~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g-~~~~~~~~~~~~~~~~ 215 (216)
-.+...... -....+.+.|+|+|+ .......+.|..+|.++.+| |+.+++++++.++|||
T Consensus 220 ~~~~~~k~~-~~~~~prLalNcVGG-ksa~~iar~L~~GgtmvTYGGMSkqPv~~~ts~lIFK 280 (354)
T KOG0025|consen 220 RDRKMKKFK-GDNPRPRLALNCVGG-KSATEIARYLERGGTMVTYGGMSKQPVTVPTSLLIFK 280 (354)
T ss_pred cchhhhhhh-ccCCCceEEEeccCc-hhHHHHHHHHhcCceEEEecCccCCCcccccchheec
Confidence 111111111 134578999999999 66678999999999999997 7777899999999987
No 74
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=99.93 E-value=1.6e-24 Score=177.60 Aligned_cols=188 Identities=30% Similarity=0.499 Sum_probs=157.9
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcch-h
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCE-P 80 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~-~ 80 (216)
+|++++.+++||+|+..+..+|++|.+|..+++++|+....++. +..|+|++|+.++...++++|+++++.+++.+. .
T Consensus 69 ~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~ 147 (334)
T PRK13771 69 VGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGE-ELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCV 147 (334)
T ss_pred eCCCCccCCCCCEEEECCCCCCcCChhhcCCCcccCcccccccc-ccCceeeeeeecchhceEECCCCCCHHHhhcccch
Confidence 57788889999999998888999999999999999998776664 457999999999999999999999998888655 7
Q ss_pred hHHHHHHHHHcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHH
Q 048013 81 LSVGVHACRRANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVE 159 (216)
Q Consensus 81 ~~~a~~~l~~~~~~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 159 (216)
+.++|++++...+.++++++|+|+ |.+|++++++++..|++ ++++++++++.+.++++ ++.+++.+ ++.+.++
T Consensus 148 ~~~a~~~~~~~~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~-vi~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~v~ 221 (334)
T PRK13771 148 TGMVYRGLRRAGVKKGETVLVTGAGGGVGIHAIQVAKALGAK-VIAVTSSESKAKIVSKY-ADYVIVGS----KFSEEVK 221 (334)
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHH-HHHhcCch----hHHHHHH
Confidence 788999986558899999999997 99999999999999995 88888888888888887 55444321 3333333
Q ss_pred HHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCC
Q 048013 160 KIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 160 ~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
+ .+ ++|+++|++|+ ......+++++++|+++.+|...
T Consensus 222 ~----~~-~~d~~ld~~g~-~~~~~~~~~l~~~G~~v~~g~~~ 258 (334)
T PRK13771 222 K----IG-GADIVIETVGT-PTLEESLRSLNMGGKIIQIGNVD 258 (334)
T ss_pred h----cC-CCcEEEEcCCh-HHHHHHHHHHhcCCEEEEEeccC
Confidence 3 23 69999999998 56789999999999999999644
No 75
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=99.93 E-value=7.7e-24 Score=173.38 Aligned_cols=195 Identities=34% Similarity=0.585 Sum_probs=162.3
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcch-h
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCE-P 80 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~-~ 80 (216)
+|++++.+++||+|++.+..+|++|.+|..+.+++|.+...+|. ...|+|++|+.++.+.++++|+++++++++.+. .
T Consensus 72 ~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~ 150 (342)
T cd08266 72 VGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGE-HVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLT 150 (342)
T ss_pred eCCCCCCCCCCCEEEEccccccccchhhcccccccccccccccc-ccCcceeEEEEechHHceeCCCCCCHHHHHhhhhH
Confidence 67888889999999999999999999999999999998766655 356899999999999999999999998888654 6
Q ss_pred hHHHHHHH-HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHH
Q 048013 81 LSVGVHAC-RRANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEV 158 (216)
Q Consensus 81 ~~~a~~~l-~~~~~~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 158 (216)
+.++++++ +...+.++++++|+|+ +++|++++++++..|++ ++.+++++++.+.++.++.+.+++. ...+..+.+
T Consensus 151 ~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 227 (342)
T cd08266 151 FLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGAT-VIATAGSEDKLERAKELGADYVIDY--RKEDFVREV 227 (342)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHcCCCeEEec--CChHHHHHH
Confidence 77888887 5678899999999997 69999999999999996 8888888888888888887665543 223444444
Q ss_pred HHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCC
Q 048013 159 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHR 203 (216)
Q Consensus 159 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 203 (216)
.+. ..+.++|++++++|. ..+...+++++++|+++.+|....
T Consensus 228 ~~~--~~~~~~d~~i~~~g~-~~~~~~~~~l~~~G~~v~~~~~~~ 269 (342)
T cd08266 228 REL--TGKRGVDVVVEHVGA-ATWEKSLKSLARGGRLVTCGATTG 269 (342)
T ss_pred HHH--hCCCCCcEEEECCcH-HHHHHHHHHhhcCCEEEEEecCCC
Confidence 433 235679999999998 677889999999999999986543
No 76
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=99.93 E-value=6.8e-24 Score=173.63 Aligned_cols=184 Identities=27% Similarity=0.408 Sum_probs=158.6
Q ss_pred CCCCCCCCCCCCEEEEcCC-cCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcc-h
Q 048013 2 VGSEVKTLVPGDRVALEPG-ISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMC-E 79 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~-~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~-~ 79 (216)
+|+++..+++||+|++.+. .+|++|..|+.+++++|....+++. ..+|+|++|+.++.+.++++|+++++.+++.+ .
T Consensus 73 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~ 151 (329)
T cd08298 73 VGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGY-TVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLC 151 (329)
T ss_pred ECCCCCCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCcccccc-ccCCceEEEEEecchhEEECCCCCCHHHhhHhhh
Confidence 6788888999999987654 6899999999999999998877666 34699999999999999999999999888844 5
Q ss_pred hhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHH
Q 048013 80 PLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVE 159 (216)
Q Consensus 80 ~~~~a~~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 159 (216)
++.++|++++..+++++++++|+|+|++|++++++++..|++ +++++.++++++.++++|++..++....
T Consensus 152 ~~~ta~~~~~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~--------- 221 (329)
T cd08298 152 AGIIGYRALKLAGLKPGQRLGLYGFGASAHLALQIARYQGAE-VFAFTRSGEHQELARELGADWAGDSDDL--------- 221 (329)
T ss_pred hhHHHHHHHHhhCCCCCCEEEEECCcHHHHHHHHHHHHCCCe-EEEEcCChHHHHHHHHhCCcEEeccCcc---------
Confidence 788999999888899999999999999999999999999985 8888888899999999998776653211
Q ss_pred HHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccC
Q 048013 160 KIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG 201 (216)
Q Consensus 160 ~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~ 201 (216)
.++++|+++++.+....++.++++++++|+++.+|..
T Consensus 222 -----~~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~ 258 (329)
T cd08298 222 -----PPEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIH 258 (329)
T ss_pred -----CCCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCC
Confidence 2457999999887767889999999999999999854
No 77
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=99.92 E-value=1.8e-23 Score=170.99 Aligned_cols=189 Identities=37% Similarity=0.614 Sum_probs=158.8
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcc-hh
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMC-EP 80 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~-~~ 80 (216)
+|++++.+++||+|+..+...|++|.+|..++.++|.+...+|. +..|+|++|+.++...++++|+++++++++.+ .+
T Consensus 69 ~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~ 147 (332)
T cd08259 69 VGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGE-EVDGGFAEYVKVPERSLVKLPDNVSDESAALAACV 147 (332)
T ss_pred ECCCCccCCCCCEEEECCCCCCcCChhhhCCCcccCCCcccccc-ccCCeeeeEEEechhheEECCCCCCHHHHhhhccH
Confidence 57888889999999999889999999999999999998655553 45799999999999999999999999888855 47
Q ss_pred hHHHHHHHHHcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHH
Q 048013 81 LSVGVHACRRANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVE 159 (216)
Q Consensus 81 ~~~a~~~l~~~~~~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 159 (216)
+.++|++++...+.++++++|+|+ |++|+++++.++..|.+ ++++.+++++.+.+++++.+.+++.+ ++.+.+.
T Consensus 148 ~~ta~~~l~~~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 222 (332)
T cd08259 148 VGTAVHALKRAGVKKGDTVLVTGAGGGVGIHAIQLAKALGAR-VIAVTRSPEKLKILKELGADYVIDGS----KFSEDVK 222 (332)
T ss_pred HHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCe-EEEEeCCHHHHHHHHHcCCcEEEecH----HHHHHHH
Confidence 789999986678899999999996 99999999999999996 88888888888888888887665432 1333343
Q ss_pred HHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCC
Q 048013 160 KIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 160 ~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
+. . ++|++++++|. .....+++.++++|+++.+|...
T Consensus 223 ~~----~-~~d~v~~~~g~-~~~~~~~~~~~~~g~~v~~g~~~ 259 (332)
T cd08259 223 KL----G-GADVVIELVGS-PTIEESLRSLNKGGRLVLIGNVT 259 (332)
T ss_pred hc----c-CCCEEEECCCh-HHHHHHHHHhhcCCEEEEEcCCC
Confidence 32 2 79999999998 55788999999999999998543
No 78
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=99.92 E-value=2e-23 Score=170.92 Aligned_cols=189 Identities=30% Similarity=0.429 Sum_probs=158.2
Q ss_pred CCCCCCCCCCCCEEEEcCC-cCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcc-h
Q 048013 2 VGSEVKTLVPGDRVALEPG-ISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMC-E 79 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~-~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~-~ 79 (216)
+|++++.+++||+|++.+. ..|++|++|+.+..++|++...++. ...|+|++|+.++++.++++|+++++.+++.+ .
T Consensus 68 ~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~ 146 (330)
T cd08245 68 VGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGY-TTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLC 146 (330)
T ss_pred ECCCCcccccCCEEEEccccCCCCCChhhhCcCcccCcCccccCc-ccCCccccEEEEcHHHeEECCCCCCHHHhhhhhh
Confidence 5788888999999988654 5799999999999999998766554 34689999999999999999999999988854 4
Q ss_pred hhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHH
Q 048013 80 PLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVE 159 (216)
Q Consensus 80 ~~~~a~~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 159 (216)
.+.++|++++..+++++++++|+|+|++|++++++|+.+|++ |+++++++++.+.++++|.+.+++... .+..+
T Consensus 147 ~~~ta~~~l~~~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~--- 220 (330)
T cd08245 147 AGITVYSALRDAGPRPGERVAVLGIGGLGHLAVQYARAMGFE-TVAITRSPDKRELARKLGADEVVDSGA--ELDEQ--- 220 (330)
T ss_pred hHHHHHHHHHhhCCCCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHhCCcEEeccCC--cchHH---
Confidence 667899998667889999999999888999999999999995 889899999999998899887765322 12111
Q ss_pred HHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccC
Q 048013 160 KIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG 201 (216)
Q Consensus 160 ~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~ 201 (216)
. ..+++|+++++++.......++++++++|+++.+|..
T Consensus 221 ~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~ 258 (330)
T cd08245 221 A----AAGGADVILVTVVSGAAAEAALGGLRRGGRIVLVGLP 258 (330)
T ss_pred h----ccCCCCEEEECCCcHHHHHHHHHhcccCCEEEEECCC
Confidence 1 1247999999988767788999999999999999854
No 79
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=99.92 E-value=1.9e-23 Score=172.50 Aligned_cols=164 Identities=20% Similarity=0.256 Sum_probs=134.8
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCc--eEE--CCCCCCch-hhh
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADL--CFK--LPDNVSLE-EGA 76 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~--ip~~~~~~-~aa 76 (216)
+|++++.|++||+|+.. |+|+||+.++... +++ +|++++++ +++
T Consensus 89 vg~~v~~~~~Gd~V~~~-------------------------------~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa 137 (348)
T PLN03154 89 VDSDDPNFKPGDLISGI-------------------------------TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLG 137 (348)
T ss_pred EecCCCCCCCCCEEEec-------------------------------CCcEEEEEEeccccceEEccCcCCCCHHHHHH
Confidence 67888899999999753 6899999999754 544 48999886 555
Q ss_pred cc-hhhHHHHHHH-HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHH-HcCCCEEEeCCCCcc
Q 048013 77 MC-EPLSVGVHAC-RRANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-KLGADNIVKVSTNLQ 152 (216)
Q Consensus 77 ~~-~~~~~a~~~l-~~~~~~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~-~~g~~~~~~~~~~~~ 152 (216)
.+ .++.|+|+++ +...++++++|||+|+ |++|++++|+|+.+|++ |+++++++++.+.++ ++|++.++++++ ..
T Consensus 138 ~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~~-Vi~~~~~~~k~~~~~~~lGa~~vi~~~~-~~ 215 (348)
T PLN03154 138 LLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGCY-VVGSAGSSQKVDLLKNKLGFDEAFNYKE-EP 215 (348)
T ss_pred HcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCE-EEEEcCCHHHHHHHHHhcCCCEEEECCC-cc
Confidence 44 4788999998 5578999999999997 99999999999999995 888889999999887 799999888642 12
Q ss_pred cHHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCC
Q 048013 153 DIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 153 ~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
++.+.++++ .++++|++||++|+ ..+..++++++++|+++++|...
T Consensus 216 ~~~~~i~~~---~~~gvD~v~d~vG~-~~~~~~~~~l~~~G~iv~~G~~~ 261 (348)
T PLN03154 216 DLDAALKRY---FPEGIDIYFDNVGG-DMLDAALLNMKIHGRIAVCGMVS 261 (348)
T ss_pred cHHHHHHHH---CCCCcEEEEECCCH-HHHHHHHHHhccCCEEEEECccc
Confidence 555555554 34689999999998 67899999999999999999754
No 80
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=99.92 E-value=3.9e-23 Score=169.92 Aligned_cols=164 Identities=20% Similarity=0.215 Sum_probs=135.6
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecC-CceEECC-CCCCch-hhh-c
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPA-DLCFKLP-DNVSLE-EGA-M 77 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~ip-~~~~~~-~aa-~ 77 (216)
+|+.++.|++||+|+.. |+|+||+.+|+ ..++++| ++++++ +++ +
T Consensus 84 v~~~v~~~~vGd~V~~~-------------------------------g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l 132 (338)
T cd08295 84 VDSGNPDFKVGDLVWGF-------------------------------TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLL 132 (338)
T ss_pred EecCCCCCCCCCEEEec-------------------------------CCceeEEEecchhceeecCCCCCCHHHHHHhc
Confidence 46677789999999753 68999999999 8999995 567765 455 4
Q ss_pred chhhHHHHHHH-HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHH-cCCCEEEeCCCCcccH
Q 048013 78 CEPLSVGVHAC-RRANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKK-LGADNIVKVSTNLQDI 154 (216)
Q Consensus 78 ~~~~~~a~~~l-~~~~~~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~ 154 (216)
..++.|+|+++ +..++++|++++|+|+ |++|++++|+|+.+|++ |+++++++++.+++++ +|++.++++.+ ..++
T Consensus 133 ~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~-Vi~~~~~~~~~~~~~~~lGa~~vi~~~~-~~~~ 210 (338)
T cd08295 133 GMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCY-VVGSAGSDEKVDLLKNKLGFDDAFNYKE-EPDL 210 (338)
T ss_pred ccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhcCCceeEEcCC-cccH
Confidence 45788999998 5678999999999996 99999999999999995 8888889999999988 99998877532 2355
Q ss_pred HHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCC
Q 048013 155 AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 155 ~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
.+.+++. .++++|++||++|+ ..+..++++++++|+++.+|...
T Consensus 211 ~~~i~~~---~~~gvd~v~d~~g~-~~~~~~~~~l~~~G~iv~~G~~~ 254 (338)
T cd08295 211 DAALKRY---FPNGIDIYFDNVGG-KMLDAVLLNMNLHGRIAACGMIS 254 (338)
T ss_pred HHHHHHh---CCCCcEEEEECCCH-HHHHHHHHHhccCcEEEEecccc
Confidence 5555554 34689999999998 77899999999999999999644
No 81
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.91 E-value=6.9e-23 Score=168.93 Aligned_cols=192 Identities=26% Similarity=0.310 Sum_probs=149.2
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcc-hh
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMC-EP 80 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~-~~ 80 (216)
+|++++.|++||+|+..+..+|++|..|... ..++. ..+|+|++|+.++.+.++++|+++++.+++.+ .+
T Consensus 92 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~--------~~~~~-~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~ 162 (350)
T cd08274 92 VGEGVDTARIGERVLVDPSIRDPPEDDPADI--------DYIGS-ERDGGFAEYTVVPAENAYPVNSPLSDVELATFPCS 162 (350)
T ss_pred eCCCCCCCCCCCEEEEecCcCCCCccccccc--------cccCC-CCCccceEEEEecHHHceeCCCCCCHHHHHhcccH
Confidence 6888889999999999888888887664321 11221 23589999999999999999999999887754 47
Q ss_pred hHHHHHHHHHcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHH
Q 048013 81 LSVGVHACRRANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVE 159 (216)
Q Consensus 81 ~~~a~~~l~~~~~~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 159 (216)
+.++|++++...++++++++|+|+ |++|++++++|+.+|++ +++++.++ +.+.++++|++.+.+. ....+.+ .
T Consensus 163 ~~ta~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~-vi~~~~~~-~~~~~~~~g~~~~~~~--~~~~~~~--~ 236 (350)
T cd08274 163 YSTAENMLERAGVGAGETVLVTGASGGVGSALVQLAKRRGAI-VIAVAGAA-KEEAVRALGADTVILR--DAPLLAD--A 236 (350)
T ss_pred HHHHHHHHhhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCE-EEEEeCch-hhHHHHhcCCeEEEeC--CCccHHH--H
Confidence 888999987788999999999997 99999999999999996 77776655 7788888998654432 2223332 2
Q ss_pred HHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCCC-Ccccchh
Q 048013 160 KIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHRE-MTVPLTP 211 (216)
Q Consensus 160 ~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~ 211 (216)
.. +.++++|++||++++ ..+..++++++++|+++.+|..... .++++..
T Consensus 237 ~~--~~~~~~d~vi~~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~ 286 (350)
T cd08274 237 KA--LGGEPVDVVADVVGG-PLFPDLLRLLRPGGRYVTAGAIAGPVVELDLRT 286 (350)
T ss_pred Hh--hCCCCCcEEEecCCH-HHHHHHHHHhccCCEEEEecccCCccccCCHHH
Confidence 22 356789999999998 6788999999999999999854433 3455444
No 82
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=99.91 E-value=4.5e-23 Score=169.84 Aligned_cols=164 Identities=22% Similarity=0.284 Sum_probs=134.4
Q ss_pred CCCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchh-----h
Q 048013 1 KVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEE-----G 75 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~-----a 75 (216)
++|++|+.|++||+|+.. .++|+||+.+|++.++++|+++++.+ +
T Consensus 82 ~vG~~v~~~~~Gd~V~~~------------------------------~~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a 131 (345)
T cd08293 82 VEESKHQKFAVGDIVTSF------------------------------NWPWQTYAVLDGSSLEKVDPQLVDGHLSYFLG 131 (345)
T ss_pred EeccCCCCCCCCCEEEec------------------------------CCCceeEEEecHHHeEEcCccccccchhHHhh
Confidence 368899999999999853 15799999999999999999854332 2
Q ss_pred hcchhhHHHHHHH-HHcCCCCC--CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHH-cCCCEEEeCCCC
Q 048013 76 AMCEPLSVGVHAC-RRANIGPE--TNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKK-LGADNIVKVSTN 150 (216)
Q Consensus 76 a~~~~~~~a~~~l-~~~~~~~~--~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~-~g~~~~~~~~~~ 150 (216)
+...++.++|+++ +..+++++ ++|||+|+ |++|++++|+|+.+|+.+|+++++++++.+.+++ +|++.++++.+
T Consensus 132 ~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~- 210 (345)
T cd08293 132 AVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKT- 210 (345)
T ss_pred hcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCC-
Confidence 3444788999998 55667776 99999996 9999999999999998458889899999888866 99998887543
Q ss_pred cccHHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEecc
Q 048013 151 LQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 200 (216)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~ 200 (216)
.++.+.++++ .++++|++||++|+ ..+..++++|+++|+++.+|.
T Consensus 211 -~~~~~~i~~~---~~~gvd~vid~~g~-~~~~~~~~~l~~~G~iv~~G~ 255 (345)
T cd08293 211 -DNVAERLREL---CPEGVDVYFDNVGG-EISDTVISQMNENSHIILCGQ 255 (345)
T ss_pred -CCHHHHHHHH---CCCCceEEEECCCc-HHHHHHHHHhccCCEEEEEee
Confidence 4666666665 34689999999998 557899999999999999984
No 83
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=99.91 E-value=1.5e-22 Score=165.20 Aligned_cols=167 Identities=28% Similarity=0.337 Sum_probs=139.5
Q ss_pred CCCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcch-
Q 048013 1 KVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCE- 79 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~- 79 (216)
++|++|+.+++||+|+..+ ..|+|++|+.+++..++++|+++++++++.+.
T Consensus 72 ~~G~~v~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~ 123 (324)
T cd08292 72 AVGEGVKGLQVGQRVAVAP----------------------------VHGTWAEYFVAPADGLVPLPDGISDEVAAQLIA 123 (324)
T ss_pred EeCCCCCCCCCCCEEEecc----------------------------CCCcceeEEEEchHHeEECCCCCCHHHhhhccc
Confidence 3688888999999998751 25899999999999999999999999888654
Q ss_pred hhHHHHHHHHHcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHH
Q 048013 80 PLSVGVHACRRANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEV 158 (216)
Q Consensus 80 ~~~~a~~~l~~~~~~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 158 (216)
...++|++++...++++++++|+|+ |.+|++++++|+.+|++ ++++..++++.+.++++|.+.+++. ...++.+.+
T Consensus 124 ~~~ta~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~-v~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~i 200 (324)
T cd08292 124 MPLSALMLLDFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGIN-VINLVRRDAGVAELRALGIGPVVST--EQPGWQDKV 200 (324)
T ss_pred cHHHHHHHHHhhCCCCCCEEEEcccccHHHHHHHHHHHHCCCe-EEEEecCHHHHHHHHhcCCCEEEcC--CCchHHHHH
Confidence 5567888887788999999999986 99999999999999996 7777777888888888898877664 334555566
Q ss_pred HHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccC
Q 048013 159 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG 201 (216)
Q Consensus 159 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~ 201 (216)
.++ +.++++|++||++|+ .....++++++++|+++.+|..
T Consensus 201 ~~~--~~~~~~d~v~d~~g~-~~~~~~~~~l~~~g~~v~~g~~ 240 (324)
T cd08292 201 REA--AGGAPISVALDSVGG-KLAGELLSLLGEGGTLVSFGSM 240 (324)
T ss_pred HHH--hCCCCCcEEEECCCC-hhHHHHHHhhcCCcEEEEEecC
Confidence 655 356789999999999 5678899999999999999964
No 84
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=99.90 E-value=4.1e-22 Score=162.98 Aligned_cols=168 Identities=21% Similarity=0.286 Sum_probs=134.2
Q ss_pred CCCCCCCC-CCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcc-
Q 048013 1 KVGSEVKT-LVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMC- 78 (216)
Q Consensus 1 ~vG~~v~~-~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~- 78 (216)
++|++++. |++||+|+..+ ..+|+|+||+.+|++.++++|+++++++++.+
T Consensus 74 ~vG~~v~~~~~vGd~V~~~~---------------------------~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~ 126 (324)
T cd08291 74 AAGGGPLAQSLIGKRVAFLA---------------------------GSYGTYAEYAVADAQQCLPLPDGVSFEQGASSF 126 (324)
T ss_pred EECCCccccCCCCCEEEecC---------------------------CCCCcchheeeecHHHeEECCCCCCHHHHhhhc
Confidence 36888885 99999998741 01489999999999999999999999988743
Q ss_pred hhhHHHHHHHHHcCCCCCCEEEEE-c-CCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHH
Q 048013 79 EPLSVGVHACRRANIGPETNVLIM-G-SGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAE 156 (216)
Q Consensus 79 ~~~~~a~~~l~~~~~~~~~~vlv~-G-ag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 156 (216)
....++|.+++.... +++.++|+ | +|++|++++|+|+.+|++ ++++++++++.+.++++|++.+++++ ..++.+
T Consensus 127 ~~~~ta~~~~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~~-vi~~~~~~~~~~~~~~~g~~~~i~~~--~~~~~~ 202 (324)
T cd08291 127 VNPLTALGMLETARE-EGAKAVVHTAAASALGRMLVRLCKADGIK-VINIVRRKEQVDLLKKIGAEYVLNSS--DPDFLE 202 (324)
T ss_pred ccHHHHHHHHHhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHcCCcEEEECC--CccHHH
Confidence 355577766655555 45556555 4 699999999999999995 88899999999999999999888754 346666
Q ss_pred HHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCC
Q 048013 157 EVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 157 ~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
.++++. .++++|++||++|+ ......+++++++|+++.+|...
T Consensus 203 ~v~~~~--~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~ 245 (324)
T cd08291 203 DLKELI--AKLNATIFFDAVGG-GLTGQILLAMPYGSTLYVYGYLS 245 (324)
T ss_pred HHHHHh--CCCCCcEEEECCCc-HHHHHHHHhhCCCCEEEEEEecC
Confidence 666653 45689999999998 55677899999999999999643
No 85
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=99.90 E-value=9.1e-22 Score=160.91 Aligned_cols=158 Identities=22% Similarity=0.270 Sum_probs=132.2
Q ss_pred CCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCC---ceEECCCCCC------chhh
Q 048013 5 EVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPAD---LCFKLPDNVS------LEEG 75 (216)
Q Consensus 5 ~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~ip~~~~------~~~a 75 (216)
.++.|++||||+.. ++|++|+.++.. .++++|++++ ...+
T Consensus 74 ~~~~~~~Gd~V~~~-------------------------------~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a 122 (329)
T cd08294 74 KNSKFPVGTIVVAS-------------------------------FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALG 122 (329)
T ss_pred CCCCCCCCCEEEee-------------------------------CCeeeEEEECCccccceEECCccccccCChHHHHH
Confidence 34578999999853 578999999999 9999999987 2223
Q ss_pred hcchhhHHHHHHH-HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCccc
Q 048013 76 AMCEPLSVGVHAC-RRANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQD 153 (216)
Q Consensus 76 a~~~~~~~a~~~l-~~~~~~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 153 (216)
++..++.|+|+++ +..++++++++||+|+ |++|++++|+|+.+|++ |+++++++++.+.++++|++.++++. .++
T Consensus 123 ~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~-vi~~~~s~~~~~~l~~~Ga~~vi~~~--~~~ 199 (329)
T cd08294 123 VLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCK-VIGCAGSDDKVAWLKELGFDAVFNYK--TVS 199 (329)
T ss_pred hcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHcCCCEEEeCC--Ccc
Confidence 3445788999998 6688999999999985 99999999999999995 88898999999999999999888753 346
Q ss_pred HHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEecc
Q 048013 154 IAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM 200 (216)
Q Consensus 154 ~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~ 200 (216)
+.+.++++ .++++|++||++|+ ..+...+++++++|+++.+|.
T Consensus 200 ~~~~v~~~---~~~gvd~vld~~g~-~~~~~~~~~l~~~G~iv~~g~ 242 (329)
T cd08294 200 LEEALKEA---APDGIDCYFDNVGG-EFSSTVLSHMNDFGRVAVCGS 242 (329)
T ss_pred HHHHHHHH---CCCCcEEEEECCCH-HHHHHHHHhhccCCEEEEEcc
Confidence 65555554 35689999999998 778999999999999999985
No 86
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=99.90 E-value=4.9e-22 Score=154.76 Aligned_cols=161 Identities=18% Similarity=0.191 Sum_probs=138.6
Q ss_pred CCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCC---Cchhhhcchhh
Q 048013 5 EVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNV---SLEEGAMCEPL 81 (216)
Q Consensus 5 ~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~---~~~~aa~~~~~ 81 (216)
...+|++||.|+.. .+|+||..++.+.+.+++++. ++....+-+|.
T Consensus 87 ~~~~f~~GD~V~~~-------------------------------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG 135 (340)
T COG2130 87 NHPGFQPGDIVVGV-------------------------------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPG 135 (340)
T ss_pred CCCCCCCCCEEEec-------------------------------ccceEEEeechhhceecCCCCCCcchHHhhcCCch
Confidence 45579999999864 699999999999999998654 33334444688
Q ss_pred HHHHHHH-HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHH-cCCCEEEeCCCCcccHHHHH
Q 048013 82 SVGVHAC-RRANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKK-LGADNIVKVSTNLQDIAEEV 158 (216)
Q Consensus 82 ~~a~~~l-~~~~~~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~ 158 (216)
.|||.+| +...+++|++++|.+| |++|..+.|+||..|++ ||.+...++|.+++++ +|.+.+++|+. +++.+.+
T Consensus 136 ~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~r-VVGiaGg~eK~~~l~~~lGfD~~idyk~--~d~~~~L 212 (340)
T COG2130 136 LTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCR-VVGIAGGAEKCDFLTEELGFDAGIDYKA--EDFAQAL 212 (340)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCCe-EEEecCCHHHHHHHHHhcCCceeeecCc--ccHHHHH
Confidence 8999998 6788999999999985 99999999999999995 9999999999999877 99999999865 4776666
Q ss_pred HHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCC
Q 048013 159 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHR 203 (216)
Q Consensus 159 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 203 (216)
.+. .+.|+|+.||++|+ +.+.+++..|+..+|+..||+.++
T Consensus 213 ~~a---~P~GIDvyfeNVGg-~v~DAv~~~ln~~aRi~~CG~IS~ 253 (340)
T COG2130 213 KEA---CPKGIDVYFENVGG-EVLDAVLPLLNLFARIPVCGAISQ 253 (340)
T ss_pred HHH---CCCCeEEEEEcCCc-hHHHHHHHhhccccceeeeeehhh
Confidence 553 67899999999999 899999999999999999998665
No 87
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=99.89 E-value=9.7e-22 Score=160.81 Aligned_cols=146 Identities=21% Similarity=0.245 Sum_probs=122.0
Q ss_pred CccceeEEecCCceEEC----CCCCCchhh-hc-chhhHHHHHHH-HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCC
Q 048013 50 GCLANQVVHPADLCFKL----PDNVSLEEG-AM-CEPLSVGVHAC-RRANIGPETNVLIMGS-GPIGLVTMLAARAFGAP 121 (216)
Q Consensus 50 g~~~~~~~~~~~~~~~i----p~~~~~~~a-a~-~~~~~~a~~~l-~~~~~~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~ 121 (216)
++|++|+.++...+.++ |++++++++ +. ..++.|+|+++ +..+++++++|||+|+ |++|++++|+|+..|++
T Consensus 86 ~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~ 165 (325)
T TIGR02825 86 PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCK 165 (325)
T ss_pred cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCE
Confidence 46999999999998887 889998886 43 35788999998 6678999999999995 99999999999999995
Q ss_pred eEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccC
Q 048013 122 RIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG 201 (216)
Q Consensus 122 ~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~ 201 (216)
|+++++++++.+.++++|++.++++++. .++.+.+... .++++|++||++|+ ..+...+++++++|+++.+|..
T Consensus 166 -Vi~~~~s~~~~~~~~~lGa~~vi~~~~~-~~~~~~~~~~---~~~gvdvv~d~~G~-~~~~~~~~~l~~~G~iv~~G~~ 239 (325)
T TIGR02825 166 -VVGAAGSDEKVAYLKKLGFDVAFNYKTV-KSLEETLKKA---SPDGYDCYFDNVGG-EFSNTVIGQMKKFGRIAICGAI 239 (325)
T ss_pred -EEEEeCCHHHHHHHHHcCCCEEEecccc-ccHHHHHHHh---CCCCeEEEEECCCH-HHHHHHHHHhCcCcEEEEecch
Confidence 8888899999999999999988876431 2444444433 45689999999998 5678999999999999999964
No 88
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.89 E-value=2.9e-21 Score=156.66 Aligned_cols=166 Identities=31% Similarity=0.466 Sum_probs=137.6
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcc-hh
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMC-EP 80 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~-~~ 80 (216)
+|++++.+++||+|+.. ..|+|++|+.++++.++++|+++ ..++.. .+
T Consensus 66 vG~~v~~~~~Gd~V~~~-----------------------------~~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~ 114 (312)
T cd08269 66 LGPGVRGLAVGDRVAGL-----------------------------SGGAFAEYDLADADHAVPLPSLL--DGQAFPGEP 114 (312)
T ss_pred ECCCCcCCCCCCEEEEe-----------------------------cCCcceeeEEEchhheEECCCch--hhhHHhhhh
Confidence 68888889999999975 34899999999999999999988 233333 57
Q ss_pred hHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHH
Q 048013 81 LSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEK 160 (216)
Q Consensus 81 ~~~a~~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 160 (216)
+.+++++++..+++++++++|+|+|++|++++++|+.+|++.++++.+++++.++++++|.+.+++. ...++.+.+.+
T Consensus 115 ~~~a~~~~~~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~l~~ 192 (312)
T cd08269 115 LGCALNVFRRGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTD--DSEAIVERVRE 192 (312)
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecC--CCcCHHHHHHH
Confidence 7888988887888999999999889999999999999999658888888888888899999776653 33456566665
Q ss_pred HHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCC
Q 048013 161 IQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 161 ~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
+. .+.++|+++|++|........+++|+++|+++.+|...
T Consensus 193 ~~--~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~ 232 (312)
T cd08269 193 LT--GGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGYHQ 232 (312)
T ss_pred Hc--CCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCC
Confidence 53 45789999999988677889999999999999998643
No 89
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=99.89 E-value=3.6e-21 Score=157.87 Aligned_cols=167 Identities=20% Similarity=0.275 Sum_probs=137.5
Q ss_pred CCCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcch-
Q 048013 1 KVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCE- 79 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~- 79 (216)
++|++|+.|++||+|+.... ....|+|++|+.++++.++++|+++++++++.++
T Consensus 72 ~vG~~v~~~~~Gd~V~~~~~-------------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~ 126 (336)
T TIGR02817 72 AVGDEVTLFKPGDEVWYAGD-------------------------IDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPL 126 (336)
T ss_pred EeCCCCCCCCCCCEEEEcCC-------------------------CCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhH
Confidence 36888999999999986410 0135899999999999999999999999988654
Q ss_pred hhHHHHHHH-HHcCCCC-----CCEEEEEcC-CHHHHHHHHHHHHc-CCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCc
Q 048013 80 PLSVGVHAC-RRANIGP-----ETNVLIMGS-GPIGLVTMLAARAF-GAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNL 151 (216)
Q Consensus 80 ~~~~a~~~l-~~~~~~~-----~~~vlv~Ga-g~~G~~~i~~a~~~-g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~ 151 (216)
...++|.++ +..++++ +++++|+|+ |++|++++|+|+.+ |++ |++++.++++.+.++++|++.+++++
T Consensus 127 ~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~~-vi~~~~~~~~~~~l~~~g~~~~~~~~--- 202 (336)
T TIGR02817 127 TSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLT-VIATASRPESQEWVLELGAHHVIDHS--- 202 (336)
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCCE-EEEEcCcHHHHHHHHHcCCCEEEECC---
Confidence 677889988 5566766 999999985 99999999999998 995 88888888899999999998887643
Q ss_pred ccHHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEec
Q 048013 152 QDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG 199 (216)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g 199 (216)
.++.+.+++ ..++++|+++|++++.......+++++++|+++.++
T Consensus 203 ~~~~~~i~~---~~~~~vd~vl~~~~~~~~~~~~~~~l~~~G~~v~~~ 247 (336)
T TIGR02817 203 KPLKAQLEK---LGLEAVSYVFSLTHTDQHFKEIVELLAPQGRFALID 247 (336)
T ss_pred CCHHHHHHH---hcCCCCCEEEEcCCcHHHHHHHHHHhccCCEEEEEc
Confidence 245555554 245689999999876677899999999999999886
No 90
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=99.88 E-value=6.6e-22 Score=161.80 Aligned_cols=147 Identities=32% Similarity=0.529 Sum_probs=123.3
Q ss_pred CCCCccceeEEecCCceEECCCCCCchhhhcch-hhHHHHHHH-HHc------CCCCCCEEEEEcC-CHHHHHHHHHHHH
Q 048013 47 PVHGCLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHAC-RRA------NIGPETNVLIMGS-GPIGLVTMLAARA 117 (216)
Q Consensus 47 ~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~l-~~~------~~~~~~~vlv~Ga-g~~G~~~i~~a~~ 117 (216)
...|+|+||+.+|+..++++|+++++.+++.++ +..+||.++ ... +.+++++|||+|+ |++|++++|+|+.
T Consensus 101 ~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~ 180 (347)
T KOG1198|consen 101 LSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKH 180 (347)
T ss_pred cCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHh
Confidence 356999999999999999999999999999776 777999999 556 6999999999985 8999999999999
Q ss_pred cCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEE
Q 048013 118 FGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCL 197 (216)
Q Consensus 118 ~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~ 197 (216)
.|+. .+++.++++++++++++|++.+++|++ +++.+.+.+. .+.+||+||||+|+ ........++..+|+...
T Consensus 181 ~~~~-~v~t~~s~e~~~l~k~lGAd~vvdy~~--~~~~e~~kk~---~~~~~DvVlD~vg~-~~~~~~~~~l~~~g~~~~ 253 (347)
T KOG1198|consen 181 AGAI-KVVTACSKEKLELVKKLGADEVVDYKD--ENVVELIKKY---TGKGVDVVLDCVGG-STLTKSLSCLLKGGGGAY 253 (347)
T ss_pred cCCc-EEEEEcccchHHHHHHcCCcEeecCCC--HHHHHHHHhh---cCCCccEEEECCCC-CccccchhhhccCCceEE
Confidence 9954 677778999999999999999999865 5666655553 37899999999999 466677777777775445
Q ss_pred ecc
Q 048013 198 VGM 200 (216)
Q Consensus 198 ~g~ 200 (216)
++.
T Consensus 254 i~~ 256 (347)
T KOG1198|consen 254 IGL 256 (347)
T ss_pred EEe
Confidence 543
No 91
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=99.88 E-value=1e-20 Score=154.24 Aligned_cols=169 Identities=25% Similarity=0.326 Sum_probs=138.6
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcc-hh
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMC-EP 80 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~-~~ 80 (216)
+|++++.+++||+|+.... ...|+|++|+.+++..++++|+++++++++.+ ..
T Consensus 74 ~G~~v~~~~~Gd~V~~~~~--------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~ 127 (324)
T cd08244 74 VGPGVDPAWLGRRVVAHTG--------------------------RAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHD 127 (324)
T ss_pred eCCCCCCCCCCCEEEEccC--------------------------CCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcch
Confidence 5778888999999987521 13589999999999999999999999988754 46
Q ss_pred hHHHHHHHHHcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHH
Q 048013 81 LSVGVHACRRANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVE 159 (216)
Q Consensus 81 ~~~a~~~l~~~~~~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 159 (216)
+.++|..++...++++++++|+|+ |++|++++++|+.+|++ ++++++++++.+.++++|++.+++.. ..++.+.+.
T Consensus 128 ~~ta~~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~ 204 (324)
T cd08244 128 GRTALGLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGAT-VVGAAGGPAKTALVRALGADVAVDYT--RPDWPDQVR 204 (324)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHcCCCEEEecC--CccHHHHHH
Confidence 677766667788899999999995 99999999999999995 88998899998989999987766642 345555555
Q ss_pred HHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCC
Q 048013 160 KIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 160 ~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
+. ..++++|+++|++|+ ...+..+++++++|+++.+|...
T Consensus 205 ~~--~~~~~~d~vl~~~g~-~~~~~~~~~l~~~g~~v~~g~~~ 244 (324)
T cd08244 205 EA--LGGGGVTVVLDGVGG-AIGRAALALLAPGGRFLTYGWAS 244 (324)
T ss_pred HH--cCCCCceEEEECCCh-HhHHHHHHHhccCcEEEEEecCC
Confidence 43 245789999999998 45688999999999999998654
No 92
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=99.88 E-value=9.6e-21 Score=154.95 Aligned_cols=169 Identities=24% Similarity=0.358 Sum_probs=138.3
Q ss_pred CCCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcc-h
Q 048013 1 KVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMC-E 79 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~-~ 79 (216)
++|++++.+++||+|+.. ..+|+|++|+.++.++++++|+++++.+++.+ .
T Consensus 72 ~vG~~v~~~~~Gd~V~~~----------------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~ 123 (334)
T PTZ00354 72 DVGSDVKRFKEGDRVMAL----------------------------LPGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPE 123 (334)
T ss_pred EeCCCCCCCCCCCEEEEe----------------------------cCCCceeeEEEecHHHcEeCCCCCCHHHHHHHHH
Confidence 368888889999999864 13489999999999999999999998887754 4
Q ss_pred hhHHHHHHHH-HcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHH
Q 048013 80 PLSVGVHACR-RANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEE 157 (216)
Q Consensus 80 ~~~~a~~~l~-~~~~~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 157 (216)
++.++|+++. ...++++++++|+|+ |++|++++++|+.+|++ ++++..++++.+.++++|.+.+++... ..++.+.
T Consensus 124 ~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~ 201 (334)
T PTZ00354 124 AFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAA-TIITTSSEEKVDFCKKLAAIILIRYPD-EEGFAPK 201 (334)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHcCCcEEEecCC-hhHHHHH
Confidence 7788999884 477899999999995 99999999999999996 667888889999898899977766422 1124445
Q ss_pred HHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCC
Q 048013 158 VEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 158 ~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
+.+. +.++++|++|+++++ ..+...+++++++|+++.+|...
T Consensus 202 ~~~~--~~~~~~d~~i~~~~~-~~~~~~~~~l~~~g~~i~~~~~~ 243 (334)
T PTZ00354 202 VKKL--TGEKGVNLVLDCVGG-SYLSETAEVLAVDGKWIVYGFMG 243 (334)
T ss_pred HHHH--hCCCCceEEEECCch-HHHHHHHHHhccCCeEEEEecCC
Confidence 5544 246789999999987 77889999999999999998644
No 93
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.87 E-value=2.5e-20 Score=152.48 Aligned_cols=189 Identities=31% Similarity=0.432 Sum_probs=150.1
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcch-h
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCE-P 80 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~-~ 80 (216)
+|+.++.+++||+|+......|+.+ .++.|.....++. +..|+|++|+.++.+.++++|+++++.+++.+. +
T Consensus 72 ~G~~~~~~~~Gd~V~~~~~~~~~~~------~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~ 144 (336)
T cd08276 72 VGEGVTRFKVGDRVVPTFFPNWLDG------PPTAEDEASALGG-PIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCA 144 (336)
T ss_pred eCCCCcCCCCCCEEEEecccccccc------ccccccccccccc-ccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHH
Confidence 5778888999999998766555443 3344443333333 346899999999999999999999988887554 7
Q ss_pred hHHHHHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHH
Q 048013 81 LSVGVHAC-RRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVE 159 (216)
Q Consensus 81 ~~~a~~~l-~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 159 (216)
+.++|+++ +...++++++++|+|+|++|++++++++..|++ +++++.++++.+.+++++.+.+++... ..++.+.+.
T Consensus 145 ~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~ 222 (336)
T cd08276 145 GLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGAR-VIATSSSDEKLERAKALGADHVINYRT-TPDWGEEVL 222 (336)
T ss_pred HHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHcCCCEEEcCCc-ccCHHHHHH
Confidence 77899988 456789999999998899999999999999996 888889999999998899888776432 144555555
Q ss_pred HHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCC
Q 048013 160 KIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 160 ~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
++ +.++++|+++|+++. .....++++++++|+++.+|...
T Consensus 223 ~~--~~~~~~d~~i~~~~~-~~~~~~~~~l~~~G~~v~~g~~~ 262 (336)
T cd08276 223 KL--TGGRGVDHVVEVGGP-GTLAQSIKAVAPGGVISLIGFLS 262 (336)
T ss_pred HH--cCCCCCcEEEECCCh-HHHHHHHHhhcCCCEEEEEccCC
Confidence 54 245789999999986 67788999999999999999644
No 94
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=99.87 E-value=1.3e-20 Score=153.65 Aligned_cols=168 Identities=26% Similarity=0.339 Sum_probs=137.9
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcc-hh
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMC-EP 80 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~-~~ 80 (216)
+|++++.+++||+|+..+ ..|+|++|+.++...++++|+++++.+++.+ ..
T Consensus 71 ~G~~v~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~ 122 (323)
T cd05282 71 VGSGVSGLLVGQRVLPLG----------------------------GEGTWQEYVVAPADDLIPVPDSISDEQAAMLYIN 122 (323)
T ss_pred eCCCCCCCCCCCEEEEeC----------------------------CCCcceeEEecCHHHeEECCCCCCHHHHHHHhcc
Confidence 688888899999999751 1489999999999999999999998887754 36
Q ss_pred hHHHHHHH-HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHH
Q 048013 81 LSVGVHAC-RRANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEV 158 (216)
Q Consensus 81 ~~~a~~~l-~~~~~~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 158 (216)
..++|+++ +...+.++++++|+|+ |.+|++++++|+.+|++ ++++..++++.+.++++|.+.++++.. .++.+.+
T Consensus 123 ~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~ 199 (323)
T cd05282 123 PLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFK-TINVVRRDEQVEELKALGADEVIDSSP--EDLAQRV 199 (323)
T ss_pred HHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCCe-EEEEecChHHHHHHHhcCCCEEecccc--hhHHHHH
Confidence 67888887 4566789999999986 89999999999999996 788888888888899999988776432 3444445
Q ss_pred HHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCC
Q 048013 159 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHR 203 (216)
Q Consensus 159 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 203 (216)
.+. +.++++|+++|++|+ ......+++++++|+++.+|....
T Consensus 200 ~~~--~~~~~~d~vl~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~ 241 (323)
T cd05282 200 KEA--TGGAGARLALDAVGG-ESATRLARSLRPGGTLVNYGLLSG 241 (323)
T ss_pred HHH--hcCCCceEEEECCCC-HHHHHHHHhhCCCCEEEEEccCCC
Confidence 443 356789999999999 556788999999999999986544
No 95
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.87 E-value=1.2e-20 Score=150.80 Aligned_cols=160 Identities=35% Similarity=0.458 Sum_probs=134.0
Q ss_pred CCCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcchh
Q 048013 1 KVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEP 80 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~ 80 (216)
++|++++.+++||+|+.. +.|++|+.++.+.++++|+++++.+++.+.+
T Consensus 34 ~vG~~v~~~~~Gd~V~~~-------------------------------~~~~~~~~v~~~~~~~ip~~l~~~~aa~~~~ 82 (277)
T cd08255 34 EVGSGVTGFKPGDRVFCF-------------------------------GPHAERVVVPANLLVPLPDGLPPERAALTAL 82 (277)
T ss_pred EeCCCCCCCCCCCEEEec-------------------------------CCcceEEEcCHHHeeECcCCCCHHHhHHHHH
Confidence 368888889999999875 4699999999999999999999888886677
Q ss_pred hHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcC-CCEEEeCCCCcccHHHHHH
Q 048013 81 LSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLG-ADNIVKVSTNLQDIAEEVE 159 (216)
Q Consensus 81 ~~~a~~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~ 159 (216)
+.++|++++..+++++++++|+|+|++|++++++|+.+|+++|+++++++++.+.++++| .+.++... +
T Consensus 83 ~~ta~~~~~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~---~------- 152 (277)
T cd08255 83 AATALNGVRDAEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPADPVAADT---A------- 152 (277)
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHHHcCCCccccccc---h-------
Confidence 888999988788999999999998999999999999999865888999999999989998 34333211 0
Q ss_pred HHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCC
Q 048013 160 KIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHR 203 (216)
Q Consensus 160 ~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 203 (216)
.. ..++++|++||+++........+++++++|+++.+|....
T Consensus 153 ~~--~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~ 194 (277)
T cd08255 153 DE--IGGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGL 194 (277)
T ss_pred hh--hcCCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCC
Confidence 11 1356899999999976778899999999999999986544
No 96
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=99.86 E-value=2.5e-20 Score=153.29 Aligned_cols=168 Identities=24% Similarity=0.281 Sum_probs=134.2
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcch-h
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCE-P 80 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~-~ 80 (216)
+|+++..|++||+|+..+. ..|+|++|+.++++.++++|+++++++++.+. +
T Consensus 78 vG~~v~~~~~Gd~V~~~~~---------------------------~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~ 130 (341)
T cd08290 78 VGSGVKSLKPGDWVIPLRP---------------------------GLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVN 130 (341)
T ss_pred eCCCCCCCCCCCEEEecCC---------------------------CCccchheEeccHHHeEeCCCCCCHHHHHHhhcc
Confidence 5778888999999997521 24899999999999999999999998888654 7
Q ss_pred hHHHHHHHH-HcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCh----HHHHHHHHcCCCEEEeCCCC-ccc
Q 048013 81 LSVGVHACR-RANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDD----YRLSVAKKLGADNIVKVSTN-LQD 153 (216)
Q Consensus 81 ~~~a~~~l~-~~~~~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~----~~~~~~~~~g~~~~~~~~~~-~~~ 153 (216)
+.++|+++. ...++++++|+|+|+ |++|++++++|+..|++ ++++..++ ++.+.++++|++.+++.+.. ..+
T Consensus 131 ~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 209 (341)
T cd08290 131 PCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIK-TINVVRDRPDLEELKERLKALGADHVLTEEELRSLL 209 (341)
T ss_pred HHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCCe-EEEEEcCCCcchhHHHHHHhcCCCEEEeCccccccc
Confidence 788999984 467899999999986 99999999999999996 66665554 66778888999988775321 004
Q ss_pred HHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccC
Q 048013 154 IAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG 201 (216)
Q Consensus 154 ~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~ 201 (216)
+.+.+..+. .+ ++|++||++|+ ......+++++++|+++.+|..
T Consensus 210 ~~~~i~~~~--~~-~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~ 253 (341)
T cd08290 210 ATELLKSAP--GG-RPKLALNCVGG-KSATELARLLSPGGTMVTYGGM 253 (341)
T ss_pred HHHHHHHHc--CC-CceEEEECcCc-HhHHHHHHHhCCCCEEEEEecc
Confidence 444454432 33 79999999998 5567889999999999999854
No 97
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=99.86 E-value=4.7e-20 Score=150.81 Aligned_cols=168 Identities=27% Similarity=0.356 Sum_probs=138.5
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcc-hh
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMC-EP 80 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~-~~ 80 (216)
+|++|+.+++||+|+... ...|+|++|+.++.+.++++|+++++++++.+ ..
T Consensus 72 vG~~v~~~~~Gd~V~~~~---------------------------~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~ 124 (327)
T PRK10754 72 VGSGVKHIKVGDRVVYAQ---------------------------SALGAYSSVHNVPADKAAILPDAISFEQAAASFLK 124 (327)
T ss_pred eCCCCCCCCCCCEEEECC---------------------------CCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHH
Confidence 678888899999998530 13489999999999999999999999888754 36
Q ss_pred hHHHHHHH-HHcCCCCCCEEEEEc-CCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHH
Q 048013 81 LSVGVHAC-RRANIGPETNVLIMG-SGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEV 158 (216)
Q Consensus 81 ~~~a~~~l-~~~~~~~~~~vlv~G-ag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 158 (216)
..++|.++ +...+.++++++|+| +|.+|++++++++.+|++ ++.++.++++.+.++++|++.+++.+ ..++.+.+
T Consensus 125 ~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~~-v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~ 201 (327)
T PRK10754 125 GLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAK-LIGTVGSAQKAQRAKKAGAWQVINYR--EENIVERV 201 (327)
T ss_pred HHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHCCCCEEEcCC--CCcHHHHH
Confidence 66788887 456789999999997 599999999999999996 88888889999999999998776642 34555556
Q ss_pred HHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCC
Q 048013 159 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 159 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
+++ +.++++|+++|++++ ......+++++++|+++.+|...
T Consensus 202 ~~~--~~~~~~d~vl~~~~~-~~~~~~~~~l~~~g~~v~~g~~~ 242 (327)
T PRK10754 202 KEI--TGGKKVRVVYDSVGK-DTWEASLDCLQRRGLMVSFGNAS 242 (327)
T ss_pred HHH--cCCCCeEEEEECCcH-HHHHHHHHHhccCCEEEEEccCC
Confidence 555 356789999999998 67788999999999999998543
No 98
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=99.85 E-value=8.3e-20 Score=147.10 Aligned_cols=168 Identities=27% Similarity=0.412 Sum_probs=140.7
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcch-h
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCE-P 80 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~-~ 80 (216)
+|++++.+++||+|+.... ...|+|++|+.++++.++++|+++++++++.+. +
T Consensus 52 ~G~~v~~~~~Gd~V~~~~~--------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~ 105 (303)
T cd08251 52 VGPHVTRLAVGDEVIAGTG--------------------------ESMGGHATLVTVPEDQVVRKPASLSFEEACALPVV 105 (303)
T ss_pred ECCCCCCCCCCCEEEEecC--------------------------CCCcceeeEEEccHHHeEECCCCCCHHHHHHhHHH
Confidence 6788888999999987521 135899999999999999999999999888654 7
Q ss_pred hHHHHHHHHHcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHH
Q 048013 81 LSVGVHACRRANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVE 159 (216)
Q Consensus 81 ~~~a~~~l~~~~~~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 159 (216)
+.++|.+++...++++++++|+|+ |++|++++++++.+|++ +++++.++++.+.++++|.+.+++.. ..++.+.+.
T Consensus 106 ~~ta~~~l~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~i~ 182 (303)
T cd08251 106 FLTVIDAFARAGLAKGEHILIQTATGGTGLMAVQLARLKGAE-IYATASSDDKLEYLKQLGVPHVINYV--EEDFEEEIM 182 (303)
T ss_pred HHHHHHHHHhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCE-EEEEcCCHHHHHHHHHcCCCEEEeCC--CccHHHHHH
Confidence 788999988788999999999975 99999999999999995 88888888888989999998877643 245555555
Q ss_pred HHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccC
Q 048013 160 KIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG 201 (216)
Q Consensus 160 ~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~ 201 (216)
++. .++++|+++|++++ ......+++++++|+++.+|..
T Consensus 183 ~~~--~~~~~d~v~~~~~~-~~~~~~~~~l~~~g~~v~~~~~ 221 (303)
T cd08251 183 RLT--GGRGVDVVINTLSG-EAIQKGLNCLAPGGRYVEIAMT 221 (303)
T ss_pred HHc--CCCCceEEEECCcH-HHHHHHHHHhccCcEEEEEecc
Confidence 542 45789999999987 6778899999999999999854
No 99
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=99.85 E-value=1e-19 Score=149.73 Aligned_cols=174 Identities=27% Similarity=0.352 Sum_probs=139.2
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcch-h
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCE-P 80 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~-~ 80 (216)
+|++++.+++||+|+..+...|+ + ...+|+|++|+.++...++++|+++++.+++.++ +
T Consensus 69 vG~~v~~~~~Gd~V~~~~~~~~~-------------------~-~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~ 128 (339)
T cd08249 69 VGSGVTRFKVGDRVAGFVHGGNP-------------------N-DPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVG 128 (339)
T ss_pred eCCCcCcCCCCCEEEEEeccccC-------------------C-CCCCCcccceEEechhheEECCCCCCHHHceecchH
Confidence 68888889999999976432221 0 1246899999999999999999999999888665 7
Q ss_pred hHHHHHHHH-HcCC----------CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCC
Q 048013 81 LSVGVHACR-RANI----------GPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVS 148 (216)
Q Consensus 81 ~~~a~~~l~-~~~~----------~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~ 148 (216)
+.++|+++. ..++ +++++++|+|+ |.+|++++++++.+|++ ++.+. +.++.+.++++|++.+++..
T Consensus 129 ~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~-v~~~~-~~~~~~~~~~~g~~~v~~~~ 206 (339)
T cd08249 129 LVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYK-VITTA-SPKNFDLVKSLGADAVFDYH 206 (339)
T ss_pred HHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCe-EEEEE-CcccHHHHHhcCCCEEEECC
Confidence 889999874 3333 78999999996 89999999999999996 66666 55788888999998877753
Q ss_pred CCcccHHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhc--CCEEEEeccCC
Q 048013 149 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRA--GGKVCLVGMGH 202 (216)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~--~G~~v~~g~~~ 202 (216)
..++.+.++++ .++++|+++|++|++..+..+++++++ +|+++.+|...
T Consensus 207 --~~~~~~~l~~~---~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~ 257 (339)
T cd08249 207 --DPDVVEDIRAA---TGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVP 257 (339)
T ss_pred --CchHHHHHHHh---cCCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCC
Confidence 34555555544 356899999999986778899999999 99999998654
No 100
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=99.85 E-value=1.6e-19 Score=147.45 Aligned_cols=167 Identities=23% Similarity=0.309 Sum_probs=130.7
Q ss_pred CCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcch-hhHHH
Q 048013 6 VKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVG 84 (216)
Q Consensus 6 v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~-~~~~a 84 (216)
++.+++||+|+..+.. ++. ..+|+|++|+.++++.++++|+++++++++.++ .+.++
T Consensus 74 ~~~~~~Gd~V~~~~~~---------------------~~~-~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta 131 (326)
T cd08289 74 DPRFKPGDEVIVTSYD---------------------LGV-SHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTA 131 (326)
T ss_pred CCCCCCCCEEEEcccc---------------------cCC-CCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHH
Confidence 4568999999875310 111 246999999999999999999999999988665 55677
Q ss_pred HHHHHH---cCC-CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHH
Q 048013 85 VHACRR---ANI-GPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVE 159 (216)
Q Consensus 85 ~~~l~~---~~~-~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 159 (216)
+.++.. ..+ .++++++|+|+ |++|++++++|+.+|++ |+++++++++.+.++++|++.+++.+. . ..+.+.
T Consensus 132 ~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~v~~~~~--~-~~~~~~ 207 (326)
T cd08289 132 ALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYE-VVASTGKADAADYLKKLGAKEVIPREE--L-QEESIK 207 (326)
T ss_pred HHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCCe-EEEEecCHHHHHHHHHcCCCEEEcchh--H-HHHHHH
Confidence 777632 333 34789999997 99999999999999995 888889999999999999987766422 1 223333
Q ss_pred HHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCC
Q 048013 160 KIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 160 ~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
++ .++++|++||++|+ ..+...+++++++|+++.+|...
T Consensus 208 ~~---~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~i~~g~~~ 246 (326)
T cd08289 208 PL---EKQRWAGAVDPVGG-KTLAYLLSTLQYGGSVAVSGLTG 246 (326)
T ss_pred hh---ccCCcCEEEECCcH-HHHHHHHHHhhcCCEEEEEeecC
Confidence 33 35679999999998 77889999999999999999653
No 101
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.85 E-value=1.6e-19 Score=146.03 Aligned_cols=167 Identities=25% Similarity=0.285 Sum_probs=134.9
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcch-h
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCE-P 80 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~-~ 80 (216)
+|++++.|++||+|+.. ...|+|++|+.++.+.++++|+++++++++.+. .
T Consensus 66 ~G~~v~~~~~Gd~V~~~----------------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~ 117 (305)
T cd08270 66 AAADGSGPAVGARVVGL----------------------------GAMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVA 117 (305)
T ss_pred eCCCCCCCCCCCEEEEe----------------------------cCCcceeeEEEEchHHeEECCCCCCHHHHHHhHhH
Confidence 67888889999999864 135899999999999999999999999888655 6
Q ss_pred hHHHHHHHHHcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHH
Q 048013 81 LSVGVHACRRANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVE 159 (216)
Q Consensus 81 ~~~a~~~l~~~~~~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 159 (216)
+.++|+++......++++++|+|+ |++|++++++++.+|++ ++.+++++++.+.++++|++..+... .
T Consensus 118 ~~ta~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~---~------- 186 (305)
T cd08270 118 GVTALRALRRGGPLLGRRVLVTGASGGVGRFAVQLAALAGAH-VVAVVGSPARAEGLRELGAAEVVVGG---S------- 186 (305)
T ss_pred HHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHcCCcEEEecc---c-------
Confidence 789999986554456999999997 99999999999999995 88888899999999999987554311 1
Q ss_pred HHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCC-CCcccchh
Q 048013 160 KIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHR-EMTVPLTP 211 (216)
Q Consensus 160 ~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~ 211 (216)
++ .++++|+++|++|+ ......+++++++|+++.+|.... ...+++..
T Consensus 187 ~~---~~~~~d~vl~~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~ 235 (305)
T cd08270 187 EL---SGAPVDLVVDSVGG-PQLARALELLAPGGTVVSVGSSSGEPAVFNPAA 235 (305)
T ss_pred cc---cCCCceEEEECCCc-HHHHHHHHHhcCCCEEEEEeccCCCcccccHHH
Confidence 11 23479999999998 577899999999999999996442 23344443
No 102
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.85 E-value=1.9e-19 Score=147.33 Aligned_cols=164 Identities=22% Similarity=0.297 Sum_probs=133.9
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcchhh
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPL 81 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~ 81 (216)
+|++++.+++||+|+.. ..|+|++|+.++.+.++++|++. .+.+.+..++
T Consensus 75 vG~~v~~~~~Gd~V~~~-----------------------------~~g~~~s~~~v~~~~~~~ip~~~-~~~a~l~~~~ 124 (329)
T cd08250 75 VGEGVTDFKVGDAVATM-----------------------------SFGAFAEYQVVPARHAVPVPELK-PEVLPLLVSG 124 (329)
T ss_pred ECCCCCCCCCCCEEEEe-----------------------------cCcceeEEEEechHHeEECCCCc-chhhhcccHH
Confidence 57788889999999874 35899999999999999999873 3334455678
Q ss_pred HHHHHHH-HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHH
Q 048013 82 SVGVHAC-RRANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVE 159 (216)
Q Consensus 82 ~~a~~~l-~~~~~~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 159 (216)
.++|+++ +...++++++++|+|+ |.+|++++++++..|++ ++++++++++.+.++++|.+.+++.+ ..+..+.+.
T Consensus 125 ~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~v~~~~--~~~~~~~~~ 201 (329)
T cd08250 125 LTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGCH-VIGTCSSDEKAEFLKSLGCDRPINYK--TEDLGEVLK 201 (329)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCCe-EEEEeCcHHHHHHHHHcCCceEEeCC--CccHHHHHH
Confidence 8999998 4567899999999995 99999999999999996 88888888888888999987776643 234444444
Q ss_pred HHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCC
Q 048013 160 KIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 160 ~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
+. .++++|++||++|+ ......+++++++|+++.+|...
T Consensus 202 ~~---~~~~vd~v~~~~g~-~~~~~~~~~l~~~g~~v~~g~~~ 240 (329)
T cd08250 202 KE---YPKGVDVVYESVGG-EMFDTCVDNLALKGRLIVIGFIS 240 (329)
T ss_pred Hh---cCCCCeEEEECCcH-HHHHHHHHHhccCCeEEEEeccc
Confidence 43 35689999999998 77889999999999999998543
No 103
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=99.84 E-value=4.2e-19 Score=145.58 Aligned_cols=168 Identities=23% Similarity=0.310 Sum_probs=136.3
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcch-h
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCE-P 80 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~-~ 80 (216)
+|+++..+++||+|+..... ..+|+|++|+.++.+.++++|+++++++++.+. .
T Consensus 74 ~G~~v~~~~~Gd~V~~~~~~-------------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~ 128 (336)
T cd08252 74 VGSEVTLFKVGDEVYYAGDI-------------------------TRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLT 128 (336)
T ss_pred cCCCCCCCCCCCEEEEcCCC-------------------------CCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhH
Confidence 67788889999999864110 135899999999999999999999998888554 5
Q ss_pred hHHHHHHH-HHcCCCC-----CCEEEEEcC-CHHHHHHHHHHHHcC-CCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcc
Q 048013 81 LSVGVHAC-RRANIGP-----ETNVLIMGS-GPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQ 152 (216)
Q Consensus 81 ~~~a~~~l-~~~~~~~-----~~~vlv~Ga-g~~G~~~i~~a~~~g-~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 152 (216)
+.++|.++ +...+.+ +++++|+|+ |++|++++++++.+| + ++++++.++++.+.++++|.+.+++.. .
T Consensus 129 ~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~---~ 204 (336)
T cd08252 129 SLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKELGADHVINHH---Q 204 (336)
T ss_pred HHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHhcCCcEEEeCC---c
Confidence 66788887 5566766 999999985 999999999999999 7 488888888899999999998877643 2
Q ss_pred cHHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccC
Q 048013 153 DIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG 201 (216)
Q Consensus 153 ~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~ 201 (216)
++.+.+.. ..++++|++||++++......++++++++|+++.+|..
T Consensus 205 ~~~~~i~~---~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~ 250 (336)
T cd08252 205 DLAEQLEA---LGIEPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVDP 250 (336)
T ss_pred cHHHHHHh---hCCCCCCEEEEccCcHHHHHHHHHHhcCCCEEEEecCC
Confidence 44444432 23468999999999767888999999999999999854
No 104
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.84 E-value=2.1e-19 Score=146.04 Aligned_cols=164 Identities=28% Similarity=0.424 Sum_probs=133.1
Q ss_pred CCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcc-hhhHHHH
Q 048013 7 KTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGV 85 (216)
Q Consensus 7 ~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~-~~~~~a~ 85 (216)
..+++||+|+.....- + ....|+|++|+.+++..++++|+++++++++.+ .++.++|
T Consensus 74 ~~~~~Gd~V~~~~~~~---------------------~-~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~ 131 (320)
T cd08243 74 GTFTPGQRVATAMGGM---------------------G-RTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAW 131 (320)
T ss_pred CCCCCCCEEEEecCCC---------------------C-CCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHH
Confidence 4689999998752100 0 024589999999999999999999999887754 4888999
Q ss_pred HHHH-HcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHH
Q 048013 86 HACR-RANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQK 163 (216)
Q Consensus 86 ~~l~-~~~~~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 163 (216)
+++. ...+.++++++|+|+ |++|++++++|+..|++ |+++..++++.+.++++|++.++.. ..++.+.+.++
T Consensus 132 ~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~---~~~~~~~i~~~-- 205 (320)
T cd08243 132 GSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGAT-VTATTRSPERAALLKELGADEVVID---DGAIAEQLRAA-- 205 (320)
T ss_pred HHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHhcCCcEEEec---CccHHHHHHHh--
Confidence 9984 456889999999996 99999999999999996 8888888999999999999776542 23444444443
Q ss_pred HcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccC
Q 048013 164 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG 201 (216)
Q Consensus 164 ~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~ 201 (216)
++++|+++|++++ ..+...+++++++|+++.+|..
T Consensus 206 --~~~~d~vl~~~~~-~~~~~~~~~l~~~g~~v~~g~~ 240 (320)
T cd08243 206 --PGGFDKVLELVGT-ATLKDSLRHLRPGGIVCMTGLL 240 (320)
T ss_pred --CCCceEEEECCCh-HHHHHHHHHhccCCEEEEEccC
Confidence 6789999999998 6788999999999999999964
No 105
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.84 E-value=2.9e-19 Score=142.56 Aligned_cols=165 Identities=27% Similarity=0.379 Sum_probs=137.5
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcch-h
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCE-P 80 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~-~ 80 (216)
+|++++.+++||+|+.. ..|+|++|+.++.+.++++|+++++++++.+. +
T Consensus 38 ~G~~~~~~~~Gd~V~~~-----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 88 (288)
T smart00829 38 VGPGVTGLAVGDRVMGL-----------------------------APGSFATYVRTDARLVVPIPDGLSFEEAATVPVV 88 (288)
T ss_pred eCCCCcCCCCCCEEEEE-----------------------------cCCceeeEEEccHHHeEECCCCCCHHHHHhchHH
Confidence 57888889999999874 24899999999999999999999998888654 7
Q ss_pred hHHHHHHH-HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCC--CEEEeCCCCcccHHH
Q 048013 81 LSVGVHAC-RRANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGA--DNIVKVSTNLQDIAE 156 (216)
Q Consensus 81 ~~~a~~~l-~~~~~~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~ 156 (216)
+.++|.++ +...+.++++++|+|+ |.+|++++++++..|++ ++++++++++.+.++++|. +.+++. ...++.+
T Consensus 89 ~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~ 165 (288)
T smart00829 89 FLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGAE-VFATAGSPEKRDFLRELGIPDDHIFSS--RDLSFAD 165 (288)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHcCCChhheeeC--CCccHHH
Confidence 77888887 6678899999999985 99999999999999995 8888889999999999998 555553 2334555
Q ss_pred HHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccC
Q 048013 157 EVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG 201 (216)
Q Consensus 157 ~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~ 201 (216)
.+.+.. .++++|.++|++++ ......+++++++|+++.+|..
T Consensus 166 ~~~~~~--~~~~~d~vi~~~~~-~~~~~~~~~l~~~g~~v~~g~~ 207 (288)
T smart00829 166 EILRAT--GGRGVDVVLNSLAG-EFLDASLRCLAPGGRFVEIGKR 207 (288)
T ss_pred HHHHHh--CCCCcEEEEeCCCH-HHHHHHHHhccCCcEEEEEcCc
Confidence 555442 35679999999997 7778899999999999999864
No 106
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=99.84 E-value=6.6e-19 Score=142.99 Aligned_cols=172 Identities=30% Similarity=0.408 Sum_probs=139.2
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcc-hh
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMC-EP 80 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~-~~ 80 (216)
+|+++..|++||+|+..+... ....|++++|+.++++.++++|+++++++++.+ .+
T Consensus 72 ~g~~~~~~~~Gd~v~~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~ 128 (325)
T cd08253 72 VGEGVDGLKVGDRVWLTNLGW-----------------------GRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIP 128 (325)
T ss_pred eCCCCCCCCCCCEEEEecccc-----------------------CCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhH
Confidence 678888899999999763110 013589999999999999999999999888755 47
Q ss_pred hHHHHHHHH-HcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHH
Q 048013 81 LSVGVHACR-RANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEV 158 (216)
Q Consensus 81 ~~~a~~~l~-~~~~~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 158 (216)
+.++|+++. ..++.++++++|+|+ |++|++++++++..|++ ++++++++++.+.+++++.+.+++.. ..++.+.+
T Consensus 129 ~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~ 205 (325)
T cd08253 129 ALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGAR-VIATASSAEGAELVRQAGADAVFNYR--AEDLADRI 205 (325)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHcCCCEEEeCC--CcCHHHHH
Confidence 888998884 478899999999996 99999999999999985 88888889888888889988776642 33454455
Q ss_pred HHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCC
Q 048013 159 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 159 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
.++. .++++|++++++++ ......+++++++|+++.+|...
T Consensus 206 ~~~~--~~~~~d~vi~~~~~-~~~~~~~~~l~~~g~~v~~~~~~ 246 (325)
T cd08253 206 LAAT--AGQGVDVIIEVLAN-VNLAKDLDVLAPGGRIVVYGSGG 246 (325)
T ss_pred HHHc--CCCceEEEEECCch-HHHHHHHHhhCCCCEEEEEeecC
Confidence 4442 35689999999998 56788899999999999998643
No 107
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=99.84 E-value=4.8e-19 Score=143.38 Aligned_cols=167 Identities=29% Similarity=0.401 Sum_probs=137.5
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcc-hh
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMC-EP 80 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~-~~ 80 (216)
+|++++.+++||+|+... ..|+|++|+.++++.++++|+++++.+++.+ ..
T Consensus 69 ~g~~~~~~~~G~~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 120 (320)
T cd05286 69 VGPGVTGFKVGDRVAYAG----------------------------PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQ 120 (320)
T ss_pred ECCCCCCCCCCCEEEEec----------------------------CCCceeEEEEecHHHceeCCCCCCHHHHhhccch
Confidence 577888899999998741 1589999999999999999999998888754 46
Q ss_pred hHHHHHHH-HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHH
Q 048013 81 LSVGVHAC-RRANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEV 158 (216)
Q Consensus 81 ~~~a~~~l-~~~~~~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 158 (216)
..+++.++ +..+++++++++|+|+ |++|++++++++.+|++ +++++.++++.+.++++|.+.+++. ...++.+.+
T Consensus 121 ~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~ 197 (320)
T cd05286 121 GLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGAT-VIGTVSSEEKAELARAAGADHVINY--RDEDFVERV 197 (320)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEcCCHHHHHHHHHCCCCEEEeC--CchhHHHHH
Confidence 66788887 4577889999999995 99999999999999995 8888889899999988998877653 223444445
Q ss_pred HHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCC
Q 048013 159 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 159 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
.++ +.++++|++++++++ ......+++++++|+++.+|...
T Consensus 198 ~~~--~~~~~~d~vl~~~~~-~~~~~~~~~l~~~g~~v~~g~~~ 238 (320)
T cd05286 198 REI--TGGRGVDVVYDGVGK-DTFEGSLDSLRPRGTLVSFGNAS 238 (320)
T ss_pred HHH--cCCCCeeEEEECCCc-HhHHHHHHhhccCcEEEEEecCC
Confidence 544 245689999999998 67889999999999999998644
No 108
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=99.83 E-value=7e-19 Score=142.59 Aligned_cols=167 Identities=29% Similarity=0.421 Sum_probs=136.8
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcc-hh
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMC-EP 80 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~-~~ 80 (216)
+|+++..+++||+|+.. ..+|+|++|+.++++.++++|+++++.+++.+ .+
T Consensus 72 vg~~~~~~~~Gd~V~~~----------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~ 123 (323)
T cd05276 72 VGPGVTGWKVGDRVCAL----------------------------LAGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEV 123 (323)
T ss_pred eCCCCCCCCCCCEEEEe----------------------------cCCCceeEEEEcCHHHhccCCCCCCHHHHhhchhH
Confidence 57777889999999864 13489999999999999999999998888754 47
Q ss_pred hHHHHHHH-HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHH
Q 048013 81 LSVGVHAC-RRANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEV 158 (216)
Q Consensus 81 ~~~a~~~l-~~~~~~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 158 (216)
+.++|+++ +...+.++++++|+|+ |++|++++++++..|++ ++++++++++.+.+++++.+.+++.. ..+..+.+
T Consensus 124 ~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~ 200 (323)
T cd05276 124 FFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGAR-VIATAGSEEKLEACRALGADVAINYR--TEDFAEEV 200 (323)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCCE-EEEEcCCHHHHHHHHHcCCCEEEeCC--chhHHHHH
Confidence 88999997 4567889999999996 89999999999999996 88888888888888889987766532 23444444
Q ss_pred HHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCC
Q 048013 159 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 159 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
.+. ..+.++|++++++|+ ..+...+++++++|+++.+|...
T Consensus 201 ~~~--~~~~~~d~vi~~~g~-~~~~~~~~~~~~~g~~i~~~~~~ 241 (323)
T cd05276 201 KEA--TGGRGVDVILDMVGG-DYLARNLRALAPDGRLVLIGLLG 241 (323)
T ss_pred HHH--hCCCCeEEEEECCch-HHHHHHHHhhccCCEEEEEecCC
Confidence 443 235689999999998 55788999999999999998643
No 109
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.83 E-value=6.5e-19 Score=140.66 Aligned_cols=166 Identities=25% Similarity=0.328 Sum_probs=136.4
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcc-hh
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMC-EP 80 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~-~~ 80 (216)
+|+++..+++||+|+.. ..|+|++|+.++.+.++++|+++++.+++.+ .+
T Consensus 42 ~g~~~~~~~~Gd~V~~~-----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 92 (293)
T cd05195 42 VGSGVTGLKVGDRVMGL-----------------------------APGAFATHVRVDARLVVKIPDSLSFEEAATLPVA 92 (293)
T ss_pred ecCCccCCCCCCEEEEE-----------------------------ecCcccceEEechhheEeCCCCCCHHHHhhchHH
Confidence 57788889999999874 3489999999999999999999999888865 47
Q ss_pred hHHHHHHH-HHcCCCCCCEEEEEc-CCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcC--CCEEEeCCCCcccHHH
Q 048013 81 LSVGVHAC-RRANIGPETNVLIMG-SGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLG--ADNIVKVSTNLQDIAE 156 (216)
Q Consensus 81 ~~~a~~~l-~~~~~~~~~~vlv~G-ag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~ 156 (216)
+.+++.++ +...++++++++|+| .|++|++++++++.+|++ +++++.++++.+.+++++ .+.+++. ...++.+
T Consensus 93 ~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 169 (293)
T cd05195 93 YLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAE-VFATVGSEEKREFLRELGGPVDHIFSS--RDLSFAD 169 (293)
T ss_pred HHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHhCCCcceEeec--CchhHHH
Confidence 78888887 557889999999998 599999999999999995 888888888888888877 5555543 2234445
Q ss_pred HHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCC
Q 048013 157 EVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 157 ~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
.+.++. .++++|.+++++++ ..+...+++++++|+++.+|...
T Consensus 170 ~~~~~~--~~~~~d~vi~~~~~-~~~~~~~~~l~~~g~~v~~g~~~ 212 (293)
T cd05195 170 GILRAT--GGRGVDVVLNSLSG-ELLRASWRCLAPFGRFVEIGKRD 212 (293)
T ss_pred HHHHHh--CCCCceEEEeCCCc-hHHHHHHHhcccCceEEEeeccc
Confidence 555442 46689999999999 47889999999999999998644
No 110
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=99.83 E-value=7.1e-19 Score=143.55 Aligned_cols=167 Identities=22% Similarity=0.279 Sum_probs=128.8
Q ss_pred CCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcch-hhHH
Q 048013 5 EVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSV 83 (216)
Q Consensus 5 ~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~-~~~~ 83 (216)
++..|++||+|+..+... + .+.+|+|++|+.+|++.++++|+++++++++.+. .+.+
T Consensus 72 ~~~~~~~Gd~V~~~~~~~---------------------~-~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~t 129 (323)
T TIGR02823 72 EDPRFREGDEVIVTGYGL---------------------G-VSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFT 129 (323)
T ss_pred CCCCCCCCCEEEEccCCC---------------------C-CCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHH
Confidence 345789999999753110 0 0245899999999999999999999999888654 5566
Q ss_pred HHHHH---HHcCCCCCC-EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHH
Q 048013 84 GVHAC---RRANIGPET-NVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEV 158 (216)
Q Consensus 84 a~~~l---~~~~~~~~~-~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 158 (216)
++.++ ....+.+++ +++|+|+ |.+|++++++|+.+|++ +++++.++++.+.++++|++.+++.++ .+ ..+
T Consensus 130 a~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~--~~--~~~ 204 (323)
T TIGR02823 130 AALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGYE-VVASTGKAEEEDYLKELGASEVIDRED--LS--PPG 204 (323)
T ss_pred HHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCCe-EEEEeCCHHHHHHHHhcCCcEEEcccc--HH--HHH
Confidence 76665 334478888 9999996 99999999999999996 777777778888889999987765321 11 123
Q ss_pred HHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCC
Q 048013 159 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 159 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
+.+ .+.++|+++|++|+ ..+...+++++++|+++.+|...
T Consensus 205 ~~~---~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~ 244 (323)
T TIGR02823 205 KPL---EKERWAGAVDTVGG-HTLANVLAQLKYGGAVAACGLAG 244 (323)
T ss_pred HHh---cCCCceEEEECccH-HHHHHHHHHhCCCCEEEEEcccC
Confidence 332 23359999999998 56788999999999999999654
No 111
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=99.83 E-value=8.6e-19 Score=142.95 Aligned_cols=167 Identities=23% Similarity=0.329 Sum_probs=129.7
Q ss_pred CCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcch-hhHHH
Q 048013 6 VKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVG 84 (216)
Q Consensus 6 v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~-~~~~a 84 (216)
++.+++||+|+..+. ..|. ..+|+|++|+.++++.++++|+++++++++.+. .+.++
T Consensus 74 ~~~~~~Gd~V~~~~~---------------------~~g~-~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta 131 (325)
T cd05280 74 DPRFREGDEVLVTGY---------------------DLGM-NTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTA 131 (325)
T ss_pred CCCCCCCCEEEEccc---------------------ccCC-CCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHH
Confidence 456889999987521 0111 246899999999999999999999999988664 56678
Q ss_pred HHHHHH---cCCC-CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHH
Q 048013 85 VHACRR---ANIG-PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVE 159 (216)
Q Consensus 85 ~~~l~~---~~~~-~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 159 (216)
|.+++. ..+. .+++|+|+|+ |++|++++++|+.+|++ |+++++++++++.++++|++.+++.. +......
T Consensus 132 ~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~----~~~~~~~ 206 (325)
T cd05280 132 ALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGYT-VVALTGKEEQADYLKSLGASEVLDRE----DLLDESK 206 (325)
T ss_pred HHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHhcCCcEEEcch----hHHHHHH
Confidence 877743 2334 4579999997 99999999999999996 89999999999999999998776532 1111222
Q ss_pred HHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCC
Q 048013 160 KIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 160 ~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
+. ..++++|++||++++ ..+...+++++++|+++.+|...
T Consensus 207 ~~--~~~~~~d~vi~~~~~-~~~~~~~~~l~~~g~~v~~g~~~ 246 (325)
T cd05280 207 KP--LLKARWAGAIDTVGG-DVLANLLKQTKYGGVVASCGNAA 246 (325)
T ss_pred HH--hcCCCccEEEECCch-HHHHHHHHhhcCCCEEEEEecCC
Confidence 22 245579999999998 67899999999999999999643
No 112
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=99.82 E-value=1.3e-18 Score=142.30 Aligned_cols=146 Identities=23% Similarity=0.253 Sum_probs=119.2
Q ss_pred CccceeEEecC-CceEECCCCCC--c-hhhh-cchhhHHHHHHH-HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCe
Q 048013 50 GCLANQVVHPA-DLCFKLPDNVS--L-EEGA-MCEPLSVGVHAC-RRANIGPETNVLIMGS-GPIGLVTMLAARAFGAPR 122 (216)
Q Consensus 50 g~~~~~~~~~~-~~~~~ip~~~~--~-~~aa-~~~~~~~a~~~l-~~~~~~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~ 122 (216)
++|++|+.+++ +.++++|++++ + +.++ +..++.++|+++ +...+.++++++|+|+ |++|++++++++..|++
T Consensus 94 ~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~~- 172 (329)
T cd05288 94 LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGAR- 172 (329)
T ss_pred cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCCE-
Confidence 58999999999 99999999985 3 3333 445788899988 4467889999999995 99999999999999995
Q ss_pred EEEEcCChHHHHHHHH-cCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccC
Q 048013 123 IVIVDVDDYRLSVAKK-LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG 201 (216)
Q Consensus 123 vv~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~ 201 (216)
++++++++++.+.+++ +|++.+++++ +.++.+.+.++ .++++|++||++|+ ..+..++++++++|+++.+|..
T Consensus 173 vi~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~v~~~---~~~~~d~vi~~~g~-~~~~~~~~~l~~~G~~v~~g~~ 246 (329)
T cd05288 173 VVGIAGSDEKCRWLVEELGFDAAINYK--TPDLAEALKEA---APDGIDVYFDNVGG-EILDAALTLLNKGGRIALCGAI 246 (329)
T ss_pred EEEEeCCHHHHHHHHhhcCCceEEecC--ChhHHHHHHHh---ccCCceEEEEcchH-HHHHHHHHhcCCCceEEEEeec
Confidence 8888888888888888 9988777653 23454445544 24689999999998 6788999999999999999864
Q ss_pred C
Q 048013 202 H 202 (216)
Q Consensus 202 ~ 202 (216)
.
T Consensus 247 ~ 247 (329)
T cd05288 247 S 247 (329)
T ss_pred c
Confidence 4
No 113
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.82 E-value=1.4e-18 Score=143.28 Aligned_cols=165 Identities=28% Similarity=0.316 Sum_probs=130.9
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcch-h
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCE-P 80 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~-~ 80 (216)
+|++++.+++||+|+..+.. ...|+|++|+.++++.++++|+++++++++.+. +
T Consensus 88 vG~~v~~~~~Gd~V~~~~~~-------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~ 142 (350)
T cd08248 88 IGSGVKSFEIGDEVWGAVPP-------------------------WSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYA 142 (350)
T ss_pred cCCCcccCCCCCEEEEecCC-------------------------CCCccceeEEEecHHHeecCCCCCCHHHHhhchhH
Confidence 67888889999999875221 135899999999999999999999998888554 7
Q ss_pred hHHHHHHHH-HcCCC----CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccH
Q 048013 81 LSVGVHACR-RANIG----PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDI 154 (216)
Q Consensus 81 ~~~a~~~l~-~~~~~----~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 154 (216)
+.++|.++. ...+. ++++++|+|+ |++|++++++++.+|++ ++++..+ ++.+.++++|.+..++.. ..++
T Consensus 143 ~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~-v~~~~~~-~~~~~~~~~g~~~~~~~~--~~~~ 218 (350)
T cd08248 143 GLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAH-VTTTCST-DAIPLVKSLGADDVIDYN--NEDF 218 (350)
T ss_pred HHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCCe-EEEEeCc-chHHHHHHhCCceEEECC--ChhH
Confidence 778999884 45554 4999999995 99999999999999996 7777654 577788889987776642 2233
Q ss_pred HHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccC
Q 048013 155 AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG 201 (216)
Q Consensus 155 ~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~ 201 (216)
.+.+. ..+++|++||++|. .....++++++++|+++.+|..
T Consensus 219 ~~~l~-----~~~~vd~vi~~~g~-~~~~~~~~~l~~~G~~v~~g~~ 259 (350)
T cd08248 219 EEELT-----ERGKFDVILDTVGG-DTEKWALKLLKKGGTYVTLVSP 259 (350)
T ss_pred HHHHH-----hcCCCCEEEECCCh-HHHHHHHHHhccCCEEEEecCC
Confidence 33322 23579999999998 4788999999999999999854
No 114
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=99.82 E-value=2.3e-18 Score=139.95 Aligned_cols=167 Identities=28% Similarity=0.389 Sum_probs=135.7
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcc-hh
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMC-EP 80 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~-~~ 80 (216)
+|+++..+++||+|+.. ..+|+|++|+.++.+.++++|+++++.+++.+ .+
T Consensus 72 vg~~~~~~~~Gd~V~~~----------------------------~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~ 123 (325)
T TIGR02824 72 VGEGVSRWKVGDRVCAL----------------------------VAGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPET 123 (325)
T ss_pred eCCCCCCCCCCCEEEEc----------------------------cCCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHH
Confidence 57777889999999874 13489999999999999999999988777644 47
Q ss_pred hHHHHHHH-HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHH
Q 048013 81 LSVGVHAC-RRANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEV 158 (216)
Q Consensus 81 ~~~a~~~l-~~~~~~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 158 (216)
+.++|.++ +...++++++++|+|+ |++|++++++++..|++ ++++.+++++.+.++++|.+.+++. ...++.+.+
T Consensus 124 ~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~ 200 (325)
T TIGR02824 124 FFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGAR-VFTTAGSDEKCAACEALGADIAINY--REEDFVEVV 200 (325)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHcCCcEEEec--CchhHHHHH
Confidence 78888886 6678999999999996 99999999999999995 8888888888888888988766553 223444444
Q ss_pred HHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCC
Q 048013 159 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 159 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
... ..++++|++++++++ ......+++++++|+++.+|...
T Consensus 201 ~~~--~~~~~~d~~i~~~~~-~~~~~~~~~l~~~g~~v~~g~~~ 241 (325)
T TIGR02824 201 KAE--TGGKGVDVILDIVGG-SYLNRNIKALALDGRIVQIGFQG 241 (325)
T ss_pred HHH--cCCCCeEEEEECCch-HHHHHHHHhhccCcEEEEEecCC
Confidence 443 235679999999998 57788999999999999998643
No 115
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=99.82 E-value=2.8e-18 Score=141.82 Aligned_cols=173 Identities=22% Similarity=0.279 Sum_probs=130.9
Q ss_pred CCCCCC-CCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCC----ceEECCCCCCchhhh
Q 048013 2 VGSEVK-TLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPAD----LCFKLPDNVSLEEGA 76 (216)
Q Consensus 2 vG~~v~-~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~~ip~~~~~~~aa 76 (216)
+|++++ .|++||+|+......| ...|+|++|+.++.. .++++|+++++++++
T Consensus 73 vG~~v~~~~~~Gd~V~~~~~~~~-----------------------~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa 129 (352)
T cd08247 73 VGSNVASEWKVGDEVCGIYPHPY-----------------------GGQGTLSQYLLVDPKKDKKSITRKPENISLEEAA 129 (352)
T ss_pred eCcccccCCCCCCEEEEeecCCC-----------------------CCCceeeEEEEEccccccceeEECCCCCCHHHHH
Confidence 688888 8999999987532111 135899999999987 789999999999988
Q ss_pred cch-hhHHHHHHHHHc--CCCCCCEEEEEcC-CHHHHHHHHHHHHcC-CCeEEEEcCChHHHHHHHHcCCCEEEeCCCCc
Q 048013 77 MCE-PLSVGVHACRRA--NIGPETNVLIMGS-GPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKKLGADNIVKVSTNL 151 (216)
Q Consensus 77 ~~~-~~~~a~~~l~~~--~~~~~~~vlv~Ga-g~~G~~~i~~a~~~g-~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~ 151 (216)
.+. .+.++|++++.. .++++++++|+|+ |.+|++++++|+.+| .+.++++. ++++.+.++++|++.+++.+...
T Consensus 130 ~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~~~g~~~~i~~~~~~ 208 (352)
T cd08247 130 AWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNKKLGADHFIDYDAHS 208 (352)
T ss_pred HhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHHHhCCCEEEecCCCc
Confidence 654 677899998554 6899999999997 799999999999874 43466665 45555677889998877653321
Q ss_pred c-cHHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhh---cCCEEEEec
Q 048013 152 Q-DIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATR---AGGKVCLVG 199 (216)
Q Consensus 152 ~-~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~---~~G~~v~~g 199 (216)
. .+...+.+.. +.++++|++||++|+......++++++ ++|+++.++
T Consensus 209 ~~~~~~~~~~~~-~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~ 259 (352)
T cd08247 209 GVKLLKPVLENV-KGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIV 259 (352)
T ss_pred ccchHHHHHHhh-cCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEe
Confidence 0 0323332221 126789999999998667788999999 999999774
No 116
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.82 E-value=9.4e-19 Score=136.15 Aligned_cols=147 Identities=18% Similarity=0.276 Sum_probs=121.5
Q ss_pred ccceeEEecCCce--EECCCC----CCchhhhcchhhHHHHHHH-HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCe
Q 048013 51 CLANQVVHPADLC--FKLPDN----VSLEEGAMCEPLSVGVHAC-RRANIGPETNVLIMGS-GPIGLVTMLAARAFGAPR 122 (216)
Q Consensus 51 ~~~~~~~~~~~~~--~~ip~~----~~~~~aa~~~~~~~a~~~l-~~~~~~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~ 122 (216)
+|.||.++++... ++||.+ +++....+-++..|||-.+ +++.+++|++++|.|| |++|+++.|+|+.+|+ .
T Consensus 102 gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~ 180 (343)
T KOG1196|consen 102 GWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-Y 180 (343)
T ss_pred cceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-E
Confidence 8999999987544 455432 2333444445777999888 7899999999999986 9999999999999999 5
Q ss_pred EEEEcCChHHHHHHH-HcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccC
Q 048013 123 IVIVDVDDYRLSVAK-KLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG 201 (216)
Q Consensus 123 vv~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~ 201 (216)
||....+++|.+.++ ++|.+..++|.+. .+..+.+.+ ....|+|+.||++|+ .++...+..|+.+||++.+|+.
T Consensus 181 VVGsaGS~EKv~ll~~~~G~d~afNYK~e-~~~~~aL~r---~~P~GIDiYfeNVGG-~~lDavl~nM~~~gri~~CG~I 255 (343)
T KOG1196|consen 181 VVGSAGSKEKVDLLKTKFGFDDAFNYKEE-SDLSAALKR---CFPEGIDIYFENVGG-KMLDAVLLNMNLHGRIAVCGMI 255 (343)
T ss_pred EEEecCChhhhhhhHhccCCccceeccCc-cCHHHHHHH---hCCCcceEEEeccCc-HHHHHHHHhhhhccceEeeeee
Confidence 999999999999876 4799999999753 366666665 367899999999999 8899999999999999999987
Q ss_pred CC
Q 048013 202 HR 203 (216)
Q Consensus 202 ~~ 203 (216)
++
T Consensus 256 Sq 257 (343)
T KOG1196|consen 256 SQ 257 (343)
T ss_pred hh
Confidence 65
No 117
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.80 E-value=8.4e-18 Score=136.74 Aligned_cols=172 Identities=28% Similarity=0.400 Sum_probs=138.3
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcc-hh
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMC-EP 80 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~-~~ 80 (216)
+|++++.+++||+|+..+...+ ...|++++|+.++++.++++|+++++++++.+ .+
T Consensus 72 ~G~~~~~~~~Gd~V~~~~~~~~-----------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 128 (328)
T cd08268 72 VGAGVTGFAVGDRVSVIPAADL-----------------------GQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQ 128 (328)
T ss_pred eCCCCCcCCCCCEEEecccccc-----------------------CCCccceEEEEechHhcEeCCCCCCHHHHHHhhhH
Confidence 5788888999999987532110 24589999999999999999999998887744 47
Q ss_pred hHHHHHHH-HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHH
Q 048013 81 LSVGVHAC-RRANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEV 158 (216)
Q Consensus 81 ~~~a~~~l-~~~~~~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 158 (216)
+.++|.++ +...+.++++++|+|+ |++|++++++++..|++ ++.++.+.++.+.++++|.+.+++.+ ..+..+.+
T Consensus 129 ~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~ 205 (328)
T cd08268 129 YLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGAT-VIATTRTSEKRDALLALGAAHVIVTD--EEDLVAEV 205 (328)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCE-EEEEcCCHHHHHHHHHcCCCEEEecC--CccHHHHH
Confidence 88899988 4577889999999996 99999999999999995 88888888888888888887766542 23444444
Q ss_pred HHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCC
Q 048013 159 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 159 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
.+.. .+.++|++++++++ .....++++++++|+++.+|...
T Consensus 206 ~~~~--~~~~~d~vi~~~~~-~~~~~~~~~l~~~g~~v~~g~~~ 246 (328)
T cd08268 206 LRIT--GGKGVDVVFDPVGG-PQFAKLADALAPGGTLVVYGALS 246 (328)
T ss_pred HHHh--CCCCceEEEECCch-HhHHHHHHhhccCCEEEEEEeCC
Confidence 4432 35679999999999 67788999999999999998643
No 118
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.80 E-value=8.8e-18 Score=136.25 Aligned_cols=168 Identities=33% Similarity=0.552 Sum_probs=137.5
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhc-chh
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAM-CEP 80 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~-~~~ 80 (216)
+|+++..+++||+|+..+ ..|+|++|+.++.+.++++|+++++.+++. ..+
T Consensus 72 ~g~~~~~~~~G~~V~~~~----------------------------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~ 123 (323)
T cd08241 72 VGEGVTGFKVGDRVVALT----------------------------GQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVT 123 (323)
T ss_pred eCCCCCCCCCCCEEEEec----------------------------CCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhH
Confidence 567777889999998751 258999999999999999999998887764 457
Q ss_pred hHHHHHHHH-HcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHH
Q 048013 81 LSVGVHACR-RANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEV 158 (216)
Q Consensus 81 ~~~a~~~l~-~~~~~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 158 (216)
+.+++.++. ...++++++++|+|+ |++|++++++++..|++ ++.++.+.++.+.++++|.+..++.. ..++.+.+
T Consensus 124 ~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~i 200 (323)
T cd08241 124 YGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGAR-VIAAASSEEKLALARALGADHVIDYR--DPDLRERV 200 (323)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCCE-EEEEeCCHHHHHHHHHcCCceeeecC--CccHHHHH
Confidence 788888884 677899999999997 99999999999999996 88888888888888889987766532 24555555
Q ss_pred HHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCC
Q 048013 159 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHR 203 (216)
Q Consensus 159 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 203 (216)
.++ +.+.++|.+++++|+ .....++++++++|+++.+|....
T Consensus 201 ~~~--~~~~~~d~v~~~~g~-~~~~~~~~~~~~~g~~v~~~~~~~ 242 (323)
T cd08241 201 KAL--TGGRGVDVVYDPVGG-DVFEASLRSLAWGGRLLVIGFASG 242 (323)
T ss_pred HHH--cCCCCcEEEEECccH-HHHHHHHHhhccCCEEEEEccCCC
Confidence 554 245689999999998 777889999999999999986443
No 119
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.80 E-value=6.7e-18 Score=137.31 Aligned_cols=169 Identities=30% Similarity=0.345 Sum_probs=135.6
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcch-h
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCE-P 80 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~-~ 80 (216)
+|+++..+++||+|+..... .....|+|++|+.+++++++++|+++++..++.++ .
T Consensus 72 ~G~~~~~~~~Gd~V~~~~~~-----------------------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~ 128 (326)
T cd08272 72 VGEGVTRFRVGDEVYGCAGG-----------------------LGGLQGSLAEYAVVDARLLALKPANLSMREAAALPLV 128 (326)
T ss_pred eCCCCCCCCCCCEEEEccCC-----------------------cCCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHH
Confidence 57778889999999875210 00135899999999999999999999988877554 6
Q ss_pred hHHHHHHH-HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHH
Q 048013 81 LSVGVHAC-RRANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEV 158 (216)
Q Consensus 81 ~~~a~~~l-~~~~~~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 158 (216)
+.++|+++ +..+++++++++|+|+ |.+|++++++++..|++ ++.++++ ++.+.++++|.+.+++.. .. +.+.+
T Consensus 129 ~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~-v~~~~~~-~~~~~~~~~g~~~~~~~~--~~-~~~~~ 203 (326)
T cd08272 129 GITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGAR-VYATASS-EKAAFARSLGADPIIYYR--ET-VVEYV 203 (326)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCCE-EEEEech-HHHHHHHHcCCCEEEecc--hh-HHHHH
Confidence 77888887 6788999999999985 99999999999999996 7888777 888888889987766632 22 44445
Q ss_pred HHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccC
Q 048013 159 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG 201 (216)
Q Consensus 159 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~ 201 (216)
.++ +.++++|.+++++++ ......+++++++|+++.+|..
T Consensus 204 ~~~--~~~~~~d~v~~~~~~-~~~~~~~~~l~~~g~~v~~~~~ 243 (326)
T cd08272 204 AEH--TGGRGFDVVFDTVGG-ETLDASFEAVALYGRVVSILGG 243 (326)
T ss_pred HHh--cCCCCCcEEEECCCh-HHHHHHHHHhccCCEEEEEecC
Confidence 544 245689999999998 6678899999999999998754
No 120
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.79 E-value=1.5e-17 Score=135.95 Aligned_cols=163 Identities=24% Similarity=0.287 Sum_probs=130.9
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcc-hh
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMC-EP 80 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~-~~ 80 (216)
+|+++..|++||+|+..+ ..|+|++|+.++.+.++++|+++++++++.+ .+
T Consensus 72 vG~~v~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~ 123 (331)
T cd08273 72 LGSGVTGFEVGDRVAALT----------------------------RVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLN 123 (331)
T ss_pred eCCCCccCCCCCEEEEeC----------------------------CCcceeeEEEechHHeEECCCCCCHHHHHhhhhH
Confidence 688888999999998751 2488999999999999999999999888744 47
Q ss_pred hHHHHHHH-HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHH
Q 048013 81 LSVGVHAC-RRANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEV 158 (216)
Q Consensus 81 ~~~a~~~l-~~~~~~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 158 (216)
+.++|+++ +...+.++++++|+|+ |++|++++++++..|++ |+.+.. +++.+.++++|... +.. ...++.+.
T Consensus 124 ~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~-v~~~~~-~~~~~~~~~~g~~~-~~~--~~~~~~~~- 197 (331)
T cd08273 124 YVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGAE-VYGTAS-ERNHAALRELGATP-IDY--RTKDWLPA- 197 (331)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCCE-EEEEeC-HHHHHHHHHcCCeE-EcC--CCcchhhh-
Confidence 88899988 4477899999999996 99999999999999995 777776 77888888888653 232 22233222
Q ss_pred HHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCC
Q 048013 159 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHR 203 (216)
Q Consensus 159 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 203 (216)
+. .++++|++++++++. .....+++++++|+++.+|....
T Consensus 198 -~~---~~~~~d~vl~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~ 237 (331)
T cd08273 198 -ML---TPGGVDVVFDGVGGE-SYEESYAALAPGGTLVCYGGNSS 237 (331)
T ss_pred -hc---cCCCceEEEECCchH-HHHHHHHHhcCCCEEEEEccCCC
Confidence 22 345799999999984 47899999999999999986543
No 121
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=99.78 E-value=4.7e-17 Score=132.81 Aligned_cols=166 Identities=22% Similarity=0.294 Sum_probs=126.7
Q ss_pred CCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcch-hhHH
Q 048013 5 EVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSV 83 (216)
Q Consensus 5 ~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~-~~~~ 83 (216)
+++.+++||+|+..... .+ ....|+|++|+.++.+.++++|+++++++++.+. .+.+
T Consensus 73 ~~~~~~~Gd~V~~~~~~---------------------~~-~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~t 130 (324)
T cd08288 73 SSPRFKPGDRVVLTGWG---------------------VG-ERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFT 130 (324)
T ss_pred CCCCCCCCCEEEECCcc---------------------CC-CCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHH
Confidence 45668999999874210 00 0135899999999999999999999998888654 5556
Q ss_pred HHHHHH---HcCCC-CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHH
Q 048013 84 GVHACR---RANIG-PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEV 158 (216)
Q Consensus 84 a~~~l~---~~~~~-~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 158 (216)
++.++. ..... ++++++|+|+ |++|++++++|+.+|++ +++++.++++.+.++++|++.++++++ ....+
T Consensus 131 a~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~ 205 (324)
T cd08288 131 AMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGYE-VVASTGRPEEADYLRSLGASEIIDRAE----LSEPG 205 (324)
T ss_pred HHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHhcCCCEEEEcch----hhHhh
Confidence 665543 44455 5789999997 99999999999999996 888888889999999999988776432 22223
Q ss_pred HHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccC
Q 048013 159 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG 201 (216)
Q Consensus 159 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~ 201 (216)
..+ ...++|.++|++++ ......+..++.+|+++.+|..
T Consensus 206 ~~~---~~~~~~~~~d~~~~-~~~~~~~~~~~~~g~~~~~G~~ 244 (324)
T cd08288 206 RPL---QKERWAGAVDTVGG-HTLANVLAQTRYGGAVAACGLA 244 (324)
T ss_pred hhh---ccCcccEEEECCcH-HHHHHHHHHhcCCCEEEEEEec
Confidence 332 34468999999998 5667888889999999999854
No 122
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.78 E-value=4.3e-17 Score=132.69 Aligned_cols=168 Identities=26% Similarity=0.392 Sum_probs=133.8
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcc-hh
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMC-EP 80 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~-~~ 80 (216)
+|++++.+++||+|+..+.. ...|+|++|+.++++.++++|+++++.+++.+ .+
T Consensus 71 ~G~~~~~~~~Gd~V~~~~~~-------------------------~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~ 125 (325)
T cd08271 71 VGAKVTGWKVGDRVAYHASL-------------------------ARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCA 125 (325)
T ss_pred eCCCCCcCCCCCEEEeccCC-------------------------CCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhh
Confidence 57788889999999975321 13589999999999999999999998888754 47
Q ss_pred hHHHHHHH-HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHH
Q 048013 81 LSVGVHAC-RRANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEV 158 (216)
Q Consensus 81 ~~~a~~~l-~~~~~~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 158 (216)
+.++++++ +..+++++++++|+|+ |++|++++++++..|++ ++++. ++++.+.+.++|.+.+++. ...++.+.+
T Consensus 126 ~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~~-v~~~~-~~~~~~~~~~~g~~~~~~~--~~~~~~~~~ 201 (325)
T cd08271 126 GLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLR-VITTC-SKRNFEYVKSLGADHVIDY--NDEDVCERI 201 (325)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCE-EEEEE-cHHHHHHHHHcCCcEEecC--CCccHHHHH
Confidence 88899988 5577889999999997 79999999999999996 66665 6677788888998776653 233444455
Q ss_pred HHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccC
Q 048013 159 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMG 201 (216)
Q Consensus 159 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~ 201 (216)
.++ ..++++|.+++++++ ......+++++++|+++.+|..
T Consensus 202 ~~~--~~~~~~d~vi~~~~~-~~~~~~~~~l~~~G~~v~~~~~ 241 (325)
T cd08271 202 KEI--TGGRGVDAVLDTVGG-ETAAALAPTLAFNGHLVCIQGR 241 (325)
T ss_pred HHH--cCCCCCcEEEECCCc-HhHHHHHHhhccCCEEEEEcCC
Confidence 544 245689999999998 4556789999999999988743
No 123
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.78 E-value=2.7e-17 Score=133.52 Aligned_cols=168 Identities=32% Similarity=0.398 Sum_probs=129.3
Q ss_pred CCCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcc-h
Q 048013 1 KVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMC-E 79 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~-~ 79 (216)
++|+++..+++||+|+..... ...|+|++|+.++.+.++++|+++++++++.+ .
T Consensus 72 ~~G~~v~~~~~Gd~V~~~~~~-------------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~ 126 (319)
T cd08267 72 AVGSGVTRFKVGDEVFGRLPP-------------------------KGGGALAEYVVAPESGLAKKPEGVSFEEAAALPV 126 (319)
T ss_pred EeCCCCCCCCCCCEEEEeccC-------------------------CCCceeeEEEEechhheEECCCCCCHHHHHhhhh
Confidence 368888889999999875221 13589999999999999999999998887755 4
Q ss_pred hhHHHHHHHHH-cCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHH
Q 048013 80 PLSVGVHACRR-ANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEE 157 (216)
Q Consensus 80 ~~~~a~~~l~~-~~~~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 157 (216)
++.++|++++. ..++++++++|+|+ |++|++++++++.+|++ +++++.+ ++.+.++++|.+.+++... .++.
T Consensus 127 ~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~~-v~~~~~~-~~~~~~~~~g~~~~~~~~~--~~~~-- 200 (319)
T cd08267 127 AGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAH-VTGVCST-RNAELVRSLGADEVIDYTT--EDFV-- 200 (319)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCE-EEEEeCH-HHHHHHHHcCCCEeecCCC--CCcc--
Confidence 77889999854 45899999999996 99999999999999995 7777665 7778888999877665432 2222
Q ss_pred HHHHHHHcCCCccEEEEcCCCH-HHHHHHHHHhhcCCEEEEeccCC
Q 048013 158 VEKIQKAMGTGIDVSFDCAGFN-KTMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 158 ~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
... +.++++|++++++++. ......+..++++|+++.+|...
T Consensus 201 -~~~--~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~g~~i~~g~~~ 243 (319)
T cd08267 201 -ALT--AGGEKYDVIFDAVGNSPFSLYRASLALKPGGRYVSVGGGP 243 (319)
T ss_pred -hhc--cCCCCCcEEEECCCchHHHHHHhhhccCCCCEEEEecccc
Confidence 111 3466899999999952 22233444499999999998654
No 124
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=99.76 E-value=6.3e-17 Score=130.54 Aligned_cols=165 Identities=27% Similarity=0.354 Sum_probs=130.9
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcch-h
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCE-P 80 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~-~ 80 (216)
+|+++..+++||+|+..+.. ...|+|++|+.+++..++++|+++++..++.+. .
T Consensus 74 ~G~~~~~~~~G~~V~~~~~~-------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 128 (309)
T cd05289 74 VGPGVTGFKVGDEVFGMTPF-------------------------TRGGAYAEYVVVPADELALKPANLSFEEAAALPLA 128 (309)
T ss_pred eCCCCCCCCCCCEEEEccCC-------------------------CCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHH
Confidence 57778889999999875211 125899999999999999999999988877554 6
Q ss_pred hHHHHHHHHH-cCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHH
Q 048013 81 LSVGVHACRR-ANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEV 158 (216)
Q Consensus 81 ~~~a~~~l~~-~~~~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 158 (216)
+.+++++++. ..+.++++++|+|+ |.+|++++++++..|++ +++++.++ +.+.+++++.+..+.... .++.+
T Consensus 129 ~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~~-v~~~~~~~-~~~~~~~~g~~~~~~~~~--~~~~~-- 202 (309)
T cd05289 129 GLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGAR-VIATASAA-NADFLRSLGADEVIDYTK--GDFER-- 202 (309)
T ss_pred HHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecch-hHHHHHHcCCCEEEeCCC--Cchhh--
Confidence 6788888854 45889999999996 99999999999999996 77777666 777788899876665322 22222
Q ss_pred HHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCC
Q 048013 159 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 159 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
...++++|++++++++ .....++++++++|+++.+|...
T Consensus 203 ----~~~~~~~d~v~~~~~~-~~~~~~~~~l~~~g~~v~~g~~~ 241 (309)
T cd05289 203 ----AAAPGGVDAVLDTVGG-ETLARSLALVKPGGRLVSIAGPP 241 (309)
T ss_pred ----ccCCCCceEEEECCch-HHHHHHHHHHhcCcEEEEEcCCC
Confidence 1245679999999998 57789999999999999998543
No 125
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.76 E-value=1.3e-16 Score=130.56 Aligned_cols=165 Identities=28% Similarity=0.409 Sum_probs=130.5
Q ss_pred CCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcch-h
Q 048013 2 VGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCE-P 80 (216)
Q Consensus 2 vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~-~ 80 (216)
+|+++..+++||+|+.. ...|+|++|+.++.+.++++|+++++.+++.+. +
T Consensus 71 ~g~~~~~~~~G~~V~~~----------------------------~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~ 122 (337)
T cd08275 71 VGEGVKDFKVGDRVMGL----------------------------TRFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVN 122 (337)
T ss_pred ECCCCcCCCCCCEEEEe----------------------------cCCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHH
Confidence 57778889999999875 134899999999999999999999988887554 7
Q ss_pred hHHHHHHH-HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEc-CChHHHHHHHHcCCCEEEeCCCCcccHHHH
Q 048013 81 LSVGVHAC-RRANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVD-VDDYRLSVAKKLGADNIVKVSTNLQDIAEE 157 (216)
Q Consensus 81 ~~~a~~~l-~~~~~~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 157 (216)
+.++|+++ +...++++++++|+|+ |++|++++++++.. .. +.+++ .++++.+.++++|.+.+++.. ..++.+.
T Consensus 123 ~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~-~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~ 198 (337)
T cd08275 123 YLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTV-PN-VTVVGTASASKHEALKENGVTHVIDYR--TQDYVEE 198 (337)
T ss_pred HHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHc-cC-cEEEEeCCHHHHHHHHHcCCcEEeeCC--CCcHHHH
Confidence 88899987 5677899999999997 99999999999998 21 23332 345577778889987766532 3455555
Q ss_pred HHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCC
Q 048013 158 VEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 158 ~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
+.++. ++++|+++|++|+ ......+++++++|+++.+|...
T Consensus 199 ~~~~~---~~~~d~v~~~~g~-~~~~~~~~~l~~~g~~v~~g~~~ 239 (337)
T cd08275 199 VKKIS---PEGVDIVLDALGG-EDTRKSYDLLKPMGRLVVYGAAN 239 (337)
T ss_pred HHHHh---CCCceEEEECCcH-HHHHHHHHhhccCcEEEEEeecC
Confidence 55542 4679999999998 56788999999999999998543
No 126
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.66 E-value=1.4e-15 Score=108.18 Aligned_cols=105 Identities=30% Similarity=0.597 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEEcCCCHHHHHHH
Q 048013 106 PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTA 185 (216)
Q Consensus 106 ~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~ 185 (216)
++|++++|+|+.+|+ +|+++++++++++.++++|++.+++++. .++.+.++++. .++++|++|||+|....++.+
T Consensus 1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~--~~~~~~i~~~~--~~~~~d~vid~~g~~~~~~~~ 75 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSD--DDFVEQIRELT--GGRGVDVVIDCVGSGDTLQEA 75 (130)
T ss_dssp HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTT--SSHHHHHHHHT--TTSSEEEEEESSSSHHHHHHH
T ss_pred ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccc--ccccccccccc--ccccceEEEEecCcHHHHHHH
Confidence 589999999999996 6999999999999999999999988643 45777777763 456899999999977999999
Q ss_pred HHHhhcCCEEEEeccCC-CCCcccchhhhhc
Q 048013 186 LSATRAGGKVCLVGMGH-REMTVPLTPAAAS 215 (216)
Q Consensus 186 ~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~ 215 (216)
+++++++|+++++|+.. ...+++...+++|
T Consensus 76 ~~~l~~~G~~v~vg~~~~~~~~~~~~~~~~~ 106 (130)
T PF00107_consen 76 IKLLRPGGRIVVVGVYGGDPISFNLMNLMFK 106 (130)
T ss_dssp HHHEEEEEEEEEESSTSTSEEEEEHHHHHHT
T ss_pred HHHhccCCEEEEEEccCCCCCCCCHHHHHhC
Confidence 99999999999999877 5577777777654
No 127
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.62 E-value=2.6e-15 Score=133.95 Aligned_cols=160 Identities=16% Similarity=0.234 Sum_probs=127.5
Q ss_pred CccceeEEecCCceEECCCCCCchhhhcch-hhHHHHHHH-HHcCCCCCCEEEEEc-CCHHHHHHHHHHHHcCCCeEEEE
Q 048013 50 GCLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMG-SGPIGLVTMLAARAFGAPRIVIV 126 (216)
Q Consensus 50 g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~~~~vlv~G-ag~~G~~~i~~a~~~g~~~vv~~ 126 (216)
-++++-+.++.+.+|.+|++.+.++|+.++ -++|+|+++ .....++|++|||++ +|++|+++|.+|.+.|+. |+.+
T Consensus 1505 ksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~~-VFTT 1583 (2376)
T KOG1202|consen 1505 KSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGCT-VFTT 1583 (2376)
T ss_pred hhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCCE-EEEe
Confidence 568888899999999999999999999988 678999998 778899999999995 699999999999999995 9999
Q ss_pred cCChHHHHHHHH-cCCCEEEe-CCCCcccHHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEec-cC-C
Q 048013 127 DVDDYRLSVAKK-LGADNIVK-VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG-MG-H 202 (216)
Q Consensus 127 ~~~~~~~~~~~~-~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g-~~-~ 202 (216)
..+++|++++.+ |..-.-.+ -++++.+++.-+.. .+.|+|+|+|++.... +.++..+++|+-+||+.-+| +. +
T Consensus 1584 VGSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~vl~--~T~GrGVdlVLNSLae-EkLQASiRCLa~~GRFLEIGKfDLS 1660 (2376)
T KOG1202|consen 1584 VGSAEKREFLLKRFPQLQETNFANSRDTSFEQHVLW--HTKGRGVDLVLNSLAE-EKLQASIRCLALHGRFLEIGKFDLS 1660 (2376)
T ss_pred cCcHHHHHHHHHhchhhhhhcccccccccHHHHHHH--HhcCCCeeeehhhhhH-HHHHHHHHHHHhcCeeeeecceecc
Confidence 999999988755 43221111 12444566655544 3689999999999998 88899999999999999998 21 2
Q ss_pred CCCcccchhhh
Q 048013 203 REMTVPLTPAA 213 (216)
Q Consensus 203 ~~~~~~~~~~~ 213 (216)
.+.++-|..++
T Consensus 1661 qNspLGMavfL 1671 (2376)
T KOG1202|consen 1661 QNSPLGMAVFL 1671 (2376)
T ss_pred cCCcchhhhhh
Confidence 23444444443
No 128
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.36 E-value=1.7e-11 Score=104.84 Aligned_cols=108 Identities=17% Similarity=0.259 Sum_probs=82.6
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEE-EeCCCCc-----------ccHHHHHHH
Q 048013 93 IGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNI-VKVSTNL-----------QDIAEEVEK 160 (216)
Q Consensus 93 ~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~-~~~~~~~-----------~~~~~~~~~ 160 (216)
..++++|+|+|+|.+|+++++.|+.+|+ .|+++|.++++++.++++|++.+ ++..+.. +++.+...+
T Consensus 162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~ 240 (509)
T PRK09424 162 KVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA 240 (509)
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence 4679999999999999999999999999 59999999999999999999854 3321110 122222222
Q ss_pred HHHHcCCCccEEEEcCCCH-----HH-HHHHHHHhhcCCEEEEeccC
Q 048013 161 IQKAMGTGIDVSFDCAGFN-----KT-MSTALSATRAGGKVCLVGMG 201 (216)
Q Consensus 161 ~~~~~~~~~d~vi~~~g~~-----~~-~~~~~~~l~~~G~~v~~g~~ 201 (216)
......+++|++|+|++.+ .. .+.+++.++++|+++++|..
T Consensus 241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~ 287 (509)
T PRK09424 241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAE 287 (509)
T ss_pred HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccC
Confidence 2111125799999999963 24 49999999999999999975
No 129
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.26 E-value=3.1e-12 Score=88.25 Aligned_cols=65 Identities=42% Similarity=0.764 Sum_probs=59.0
Q ss_pred CCCCCCCCCCCCCEEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEEC
Q 048013 1 KVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKL 66 (216)
Q Consensus 1 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i 66 (216)
++|++|+.|++||||+..+...|++|.+|..+..++|.+...++. ..+|+|+||+.+|+++++++
T Consensus 45 ~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 45 AVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNLCPNPEVLGL-GLDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp EESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGGTTTBEETTT-SSTCSSBSEEEEEGGGEEEE
T ss_pred eeccccccccccceeeeecccCccCchhhcCCccccCCCCCEeEc-CCCCcccCeEEEehHHEEEC
Confidence 478999999999999999998999999999999999998888887 47899999999999999874
No 130
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.09 E-value=2.1e-09 Score=89.90 Aligned_cols=111 Identities=16% Similarity=0.279 Sum_probs=85.8
Q ss_pred HHHH-HHcC-CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHH
Q 048013 85 VHAC-RRAN-IGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQ 162 (216)
Q Consensus 85 ~~~l-~~~~-~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 162 (216)
+.++ +..+ ..+|++|+|+|+|++|+.+++.++.+|+ +|++++.++.+.+.++.+|+..+ . .. +..
T Consensus 189 ~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~-------~~----e~v 255 (413)
T cd00401 189 IDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-T-------ME----EAV 255 (413)
T ss_pred HHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-c-------HH----HHH
Confidence 4454 3333 4689999999999999999999999999 48999999999999999988432 1 11 111
Q ss_pred HHcCCCccEEEEcCCCHHHHHHH-HHHhhcCCEEEEeccCCCCCcccchhhhh
Q 048013 163 KAMGTGIDVSFDCAGFNKTMSTA-LSATRAGGKVCLVGMGHREMTVPLTPAAA 214 (216)
Q Consensus 163 ~~~~~~~d~vi~~~g~~~~~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~ 214 (216)
.++|++|+++|....+... ++.++++|+++.+|.. +.++++..+..
T Consensus 256 ----~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~--~~eId~~~L~~ 302 (413)
T cd00401 256 ----KEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF--DVEIDVKGLKE 302 (413)
T ss_pred ----cCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC--CCccCHHHHHh
Confidence 2589999999997777654 9999999999999954 45666665543
No 131
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.91 E-value=2.3e-08 Score=85.61 Aligned_cols=108 Identities=19% Similarity=0.269 Sum_probs=81.4
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCc-------------ccHHHHHHH
Q 048013 94 GPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNL-------------QDIAEEVEK 160 (216)
Q Consensus 94 ~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~-------------~~~~~~~~~ 160 (216)
.++++++|+|+|.+|+++++.++.+|+. |++++++.++++.++++|.+.+.. +..+ +++.+...+
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA~-V~v~d~~~~rle~a~~lGa~~v~v-~~~e~g~~~~gYa~~~s~~~~~~~~~ 239 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGAI-VRAFDTRPEVKEQVQSMGAEFLEL-DFKEEGGSGDGYAKVMSEEFIAAEME 239 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHcCCeEEec-cccccccccccceeecCHHHHHHHHH
Confidence 4678999999999999999999999995 999999999999999999876432 1111 122222233
Q ss_pred HHHHcCCCccEEEEcC---CCHH---HHHHHHHHhhcCCEEEEeccCCC
Q 048013 161 IQKAMGTGIDVSFDCA---GFNK---TMSTALSATRAGGKVCLVGMGHR 203 (216)
Q Consensus 161 ~~~~~~~~~d~vi~~~---g~~~---~~~~~~~~l~~~G~~v~~g~~~~ 203 (216)
+.....+++|++|+++ |.+. ..+..++.|+++++++.++...+
T Consensus 240 ~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~G 288 (511)
T TIGR00561 240 LFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQG 288 (511)
T ss_pred HHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCC
Confidence 3323356799999999 5422 55788999999999999986543
No 132
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=98.81 E-value=2.8e-07 Score=72.87 Aligned_cols=133 Identities=20% Similarity=0.321 Sum_probs=88.1
Q ss_pred ccceeEEecCCceEECCCCCCchhhhcchhhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 048013 51 CLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDD 130 (216)
Q Consensus 51 ~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~ 130 (216)
.|.+|.. +...++.+++.+++..+..- +.....+.+... +.++++||.+|+|. |.+++.+++ .|...|+++|.++
T Consensus 78 ~~~~~~~-~~~~~i~i~p~~afgtg~h~-tt~~~l~~l~~~-~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDis~ 152 (250)
T PRK00517 78 SWEDPPD-PDEINIELDPGMAFGTGTHP-TTRLCLEALEKL-VLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDIDP 152 (250)
T ss_pred CCcCCCC-CCeEEEEECCCCccCCCCCH-HHHHHHHHHHhh-cCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEECCH
Confidence 4566644 77788999999988876622 222233344322 56889999999987 877776554 6776699999999
Q ss_pred HHHHHHHHc----CCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEEcCCCH---HHHHHHHHHhhcCCEEEEeccCCC
Q 048013 131 YRLSVAKKL----GADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFN---KTMSTALSATRAGGKVCLVGMGHR 203 (216)
Q Consensus 131 ~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~---~~~~~~~~~l~~~G~~v~~g~~~~ 203 (216)
...+.+++. +....+... .....||+|+.+.... ..++.+.+.|+|+|++++.|....
T Consensus 153 ~~l~~A~~n~~~~~~~~~~~~~---------------~~~~~fD~Vvani~~~~~~~l~~~~~~~LkpgG~lilsgi~~~ 217 (250)
T PRK00517 153 QAVEAARENAELNGVELNVYLP---------------QGDLKADVIVANILANPLLELAPDLARLLKPGGRLILSGILEE 217 (250)
T ss_pred HHHHHHHHHHHHcCCCceEEEc---------------cCCCCcCEEEEcCcHHHHHHHHHHHHHhcCCCcEEEEEECcHh
Confidence 888776542 221111100 0111599999877652 345678888999999999886543
No 133
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.75 E-value=2.3e-07 Score=78.10 Aligned_cols=104 Identities=21% Similarity=0.297 Sum_probs=78.9
Q ss_pred HHHHHHHc-CC-CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHH
Q 048013 84 GVHACRRA-NI-GPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKI 161 (216)
Q Consensus 84 a~~~l~~~-~~-~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 161 (216)
.|+++... ++ ..+++++|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|.. +. + +.++
T Consensus 198 ~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~-------~----l~ea 264 (425)
T PRK05476 198 LLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VM-------T----MEEA 264 (425)
T ss_pred hHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ec-------C----HHHH
Confidence 45666443 44 389999999999999999999999999 599999998877666655653 21 1 1122
Q ss_pred HHHcCCCccEEEEcCCCHHHHH-HHHHHhhcCCEEEEeccCCCC
Q 048013 162 QKAMGTGIDVSFDCAGFNKTMS-TALSATRAGGKVCLVGMGHRE 204 (216)
Q Consensus 162 ~~~~~~~~d~vi~~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~~ 204 (216)
. .++|++|+++|....+. ..+..+++++.++..|....+
T Consensus 265 l----~~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d~E 304 (425)
T PRK05476 265 A----ELGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFDNE 304 (425)
T ss_pred H----hCCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCCCc
Confidence 1 26899999999877665 688999999999999965543
No 134
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.69 E-value=7e-08 Score=78.64 Aligned_cols=108 Identities=23% Similarity=0.306 Sum_probs=80.8
Q ss_pred CceEECCCCCCchhhhcchhhHHHHHHHHHcCC----CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHH-HH
Q 048013 61 DLCFKLPDNVSLEEGAMCEPLSVGVHACRRANI----GPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRL-SV 135 (216)
Q Consensus 61 ~~~~~ip~~~~~~~aa~~~~~~~a~~~l~~~~~----~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~-~~ 135 (216)
+..+++|+.+..+.+....++++++++++.... .++++|+|+|+|.+|..+++.++..|.+.|++++++.++. ++
T Consensus 139 ~~a~~~~k~vr~et~i~~~~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~l 218 (311)
T cd05213 139 QKAIKVGKRVRTETGISRGAVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEEL 218 (311)
T ss_pred HHHHHHHHHHhhhcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence 345778888888888888888888888754332 4789999999999999999999988877799999998775 56
Q ss_pred HHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEEcCCCHHH
Q 048013 136 AKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKT 181 (216)
Q Consensus 136 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~ 181 (216)
++++|.. .... .+ +.+.. ...|+||.+++.+..
T Consensus 219 a~~~g~~-~~~~----~~----~~~~l----~~aDvVi~at~~~~~ 251 (311)
T cd05213 219 AKELGGN-AVPL----DE----LLELL----NEADVVISATGAPHY 251 (311)
T ss_pred HHHcCCe-EEeH----HH----HHHHH----hcCCEEEECCCCCch
Confidence 7778873 2221 11 22211 258999999998554
No 135
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.68 E-value=4.8e-07 Score=73.16 Aligned_cols=99 Identities=17% Similarity=0.218 Sum_probs=77.2
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEE
Q 048013 95 PETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 174 (216)
Q Consensus 95 ~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 174 (216)
.+++++|+|+|.+|..+++.++.+|+ +|++++++.++.+.++++|...+ .+ . .+.+. -..+|+||+
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~----~----~l~~~----l~~aDiVI~ 216 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HL----S----ELAEE----VGKIDIIFN 216 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH----H----HHHHH----hCCCCEEEE
Confidence 68999999999999999999999999 59999999888888888886532 11 1 12222 136999999
Q ss_pred cCCCHHHHHHHHHHhhcCCEEEEeccCCCCCcc
Q 048013 175 CAGFNKTMSTALSATRAGGKVCLVGMGHREMTV 207 (216)
Q Consensus 175 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~ 207 (216)
+++.....+..++.+++++.++.++..++..++
T Consensus 217 t~p~~~i~~~~l~~~~~g~vIIDla~~pggtd~ 249 (296)
T PRK08306 217 TIPALVLTKEVLSKMPPEALIIDLASKPGGTDF 249 (296)
T ss_pred CCChhhhhHHHHHcCCCCcEEEEEccCCCCcCe
Confidence 998744557788899999999999876655544
No 136
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.61 E-value=2.4e-08 Score=84.46 Aligned_cols=162 Identities=19% Similarity=0.228 Sum_probs=97.5
Q ss_pred EEEEcCCcCCCCCcchhCCCCCCCCCCCCCCCCCCCCccceeEEecCCceEECCCCCCchhhhcchhhHHHHHHH----H
Q 048013 14 RVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHAC----R 89 (216)
Q Consensus 14 ~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l----~ 89 (216)
+|+..+.. |+.|.+| ++.|......|. ..++.|++++.+++ .+..- ..++. .+.+.++.++ +
T Consensus 108 ~V~GE~qI-~gQvk~a----~~~a~~~~~~g~-~l~~lf~~a~~~~k-~vr~~-t~i~~------~~vSv~~~Av~la~~ 173 (417)
T TIGR01035 108 MVVGETQI-LGQVKNA----YKVAQEEKTVGK-VLERLFQKAFSVGK-RVRTE-TDISA------GAVSISSAAVELAER 173 (417)
T ss_pred hhcCChHH-HHHHHHH----HHHHHHcCCchH-HHHHHHHHHHHHhh-hhhhh-cCCCC------CCcCHHHHHHHHHHH
Confidence 55666666 7778877 444444433333 35688999988876 33320 01110 1222333332 3
Q ss_pred HcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHH-HHHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCC
Q 048013 90 RANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTG 168 (216)
Q Consensus 90 ~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (216)
.....++++++|+|+|.+|..+++.++..|+..|++++++.++.+ .+++++... +.. .+ +.+. -.+
T Consensus 174 ~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~-i~~----~~----l~~~----l~~ 240 (417)
T TIGR01035 174 IFGSLKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEA-VKF----ED----LEEY----LAE 240 (417)
T ss_pred HhCCccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeE-eeH----HH----HHHH----Hhh
Confidence 344567899999999999999999999999667999999988754 666777642 221 11 2221 126
Q ss_pred ccEEEEcCCCHHHH--HHHHHH-hhcC-C--EEEEeccCC
Q 048013 169 IDVSFDCAGFNKTM--STALSA-TRAG-G--KVCLVGMGH 202 (216)
Q Consensus 169 ~d~vi~~~g~~~~~--~~~~~~-l~~~-G--~~v~~g~~~ 202 (216)
+|+||+|++.+..+ ...++. ++.. + .++.++.+.
T Consensus 241 aDvVi~aT~s~~~ii~~e~l~~~~~~~~~~~~viDla~Pr 280 (417)
T TIGR01035 241 ADIVISSTGAPHPIVSKEDVERALRERTRPLFIIDIAVPR 280 (417)
T ss_pred CCEEEECCCCCCceEcHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 99999999875432 223333 2221 2 566777543
No 137
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.51 E-value=1.8e-06 Score=72.35 Aligned_cols=92 Identities=21% Similarity=0.279 Sum_probs=72.6
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEE
Q 048013 93 IGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 172 (216)
Q Consensus 93 ~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 172 (216)
...+++|+|+|.|.+|+.+++.++.+|++ |++++.+..+...+...|.. +.. ..+. + .+.|++
T Consensus 192 ~l~Gk~VvViG~G~IG~~vA~~ak~~Ga~-ViV~d~dp~r~~~A~~~G~~-v~~-------leea---l-----~~aDVV 254 (406)
T TIGR00936 192 LIAGKTVVVAGYGWCGKGIAMRARGMGAR-VIVTEVDPIRALEAAMDGFR-VMT-------MEEA---A-----KIGDIF 254 (406)
T ss_pred CCCcCEEEEECCCHHHHHHHHHHhhCcCE-EEEEeCChhhHHHHHhcCCE-eCC-------HHHH---H-----hcCCEE
Confidence 36899999999999999999999999995 99999888776666666653 211 1111 1 257999
Q ss_pred EEcCCCHHHHH-HHHHHhhcCCEEEEeccC
Q 048013 173 FDCAGFNKTMS-TALSATRAGGKVCLVGMG 201 (216)
Q Consensus 173 i~~~g~~~~~~-~~~~~l~~~G~~v~~g~~ 201 (216)
|+++|....+. ..+..+++++.++..|..
T Consensus 255 ItaTG~~~vI~~~~~~~mK~GailiN~G~~ 284 (406)
T TIGR00936 255 ITATGNKDVIRGEHFENMKDGAIVANIGHF 284 (406)
T ss_pred EECCCCHHHHHHHHHhcCCCCcEEEEECCC
Confidence 99999977665 588899999999999854
No 138
>PLN02494 adenosylhomocysteinase
Probab=98.50 E-value=2.2e-06 Score=72.63 Aligned_cols=92 Identities=18% Similarity=0.274 Sum_probs=72.8
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEE
Q 048013 94 GPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 173 (216)
Q Consensus 94 ~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 173 (216)
..|++++|+|.|.+|+.+++.++.+|+ +|+++++++.+...+...|...+ +.. ++. ...|+++
T Consensus 252 LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~vv--------~le----Eal----~~ADVVI 314 (477)
T PLN02494 252 IAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQVL--------TLE----DVV----SEADIFV 314 (477)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCeec--------cHH----HHH----hhCCEEE
Confidence 579999999999999999999999999 49999988877666666665421 111 111 2489999
Q ss_pred EcCCCHHHH-HHHHHHhhcCCEEEEeccCC
Q 048013 174 DCAGFNKTM-STALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 174 ~~~g~~~~~-~~~~~~l~~~G~~v~~g~~~ 202 (216)
.++|+...+ ...+..|++++.++.+|...
T Consensus 315 ~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~ 344 (477)
T PLN02494 315 TTTGNKDIIMVDHMRKMKNNAIVCNIGHFD 344 (477)
T ss_pred ECCCCccchHHHHHhcCCCCCEEEEcCCCC
Confidence 999986654 78999999999999999643
No 139
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.49 E-value=2.3e-06 Score=64.83 Aligned_cols=105 Identities=18% Similarity=0.228 Sum_probs=78.3
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHH----HHHHHcCCCEEEeCCCCcccHHHHH
Q 048013 83 VGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRL----SVAKKLGADNIVKVSTNLQDIAEEV 158 (216)
Q Consensus 83 ~a~~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~ 158 (216)
....+++...++++++||-+|+|. |..++-+++..+ +|+.+++.++-. +.++.+|..++..... +. .
T Consensus 60 ~vA~m~~~L~~~~g~~VLEIGtGs-GY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~g-DG-----~ 130 (209)
T COG2518 60 MVARMLQLLELKPGDRVLEIGTGS-GYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYENVTVRHG-DG-----S 130 (209)
T ss_pred HHHHHHHHhCCCCCCeEEEECCCc-hHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCceEEEEC-Cc-----c
Confidence 334566778899999999999885 899999999887 599999998743 3456688866544221 11 0
Q ss_pred HHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEe
Q 048013 159 EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV 198 (216)
Q Consensus 159 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~ 198 (216)
+-+ ....+||.|+-+.+.+...+..++.|+++|+++..
T Consensus 131 ~G~--~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~P 168 (209)
T COG2518 131 KGW--PEEAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIP 168 (209)
T ss_pred cCC--CCCCCcCEEEEeeccCCCCHHHHHhcccCCEEEEE
Confidence 111 12468999999999878889999999999999855
No 140
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=98.47 E-value=2.6e-06 Score=68.55 Aligned_cols=118 Identities=15% Similarity=0.182 Sum_probs=81.1
Q ss_pred hcchhhHHHHHHH----HHcC-CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCC
Q 048013 76 AMCEPLSVGVHAC----RRAN-IGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTN 150 (216)
Q Consensus 76 a~~~~~~~a~~~l----~~~~-~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~ 150 (216)
+.....+++.+++ +... --.+++++|+|.|.+|..+++.++.+|+ +|++.+++.++...+.+++...+ .
T Consensus 126 a~~n~~~~Ae~ai~~al~~~~~~l~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~~-~---- 199 (287)
T TIGR02853 126 AIYNSIPTAEGAIMMAIEHTDFTIHGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIPF-P---- 199 (287)
T ss_pred EEEccHhHHHHHHHHHHHhcCCCCCCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeee-c----
Confidence 3344455555444 2221 2357899999999999999999999999 59999999887777766665422 1
Q ss_pred cccHHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCCCCcc
Q 048013 151 LQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHREMTV 207 (216)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~ 207 (216)
+ +.+.+. -..+|++|++++..-.....+..++++..++.++..+...++
T Consensus 200 ---~-~~l~~~----l~~aDiVint~P~~ii~~~~l~~~k~~aliIDlas~Pg~tdf 248 (287)
T TIGR02853 200 ---L-NKLEEK----VAEIDIVINTIPALVLTADVLSKLPKHAVIIDLASKPGGTDF 248 (287)
T ss_pred ---H-HHHHHH----hccCCEEEECCChHHhCHHHHhcCCCCeEEEEeCcCCCCCCH
Confidence 1 112222 136999999998633335677888999999999876655544
No 141
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=98.45 E-value=8.9e-06 Score=62.86 Aligned_cols=115 Identities=23% Similarity=0.302 Sum_probs=79.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HHcCC---C-EEEeCCCCcccHHHHHHHHHHHcCCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KKLGA---D-NIVKVSTNLQDIAEEVEKIQKAMGTG 168 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~~g~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (216)
+++.++|.|| +++|.++++.+...|++ |+.+.|..++++.+ .+++. . ..+++ .+.....+.+..+.+.. +.
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~-vvl~aRR~drL~~la~~~~~~~~~~~~~DV-tD~~~~~~~i~~~~~~~-g~ 81 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAK-VVLAARREERLEALADEIGAGAALALALDV-TDRAAVEAAIEALPEEF-GR 81 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCe-EEEEeccHHHHHHHHHhhccCceEEEeecc-CCHHHHHHHHHHHHHhh-Cc
Confidence 4578899997 89999999999999995 99999999998755 66883 1 12233 22334444555554333 47
Q ss_pred ccEEEEcCCCH-------------------------HHHHHHHHHh--hcCCEEEEeccCCCCCcccchhh
Q 048013 169 IDVSFDCAGFN-------------------------KTMSTALSAT--RAGGKVCLVGMGHREMTVPLTPA 212 (216)
Q Consensus 169 ~d~vi~~~g~~-------------------------~~~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~ 212 (216)
+|++++++|-- ...+.++..| +..|.++.+|...+..+.+-..+
T Consensus 82 iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~v 152 (246)
T COG4221 82 IDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAV 152 (246)
T ss_pred ccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCcc
Confidence 99999999951 1235555555 34689999998776655555444
No 142
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=98.41 E-value=3.5e-06 Score=70.29 Aligned_cols=99 Identities=19% Similarity=0.298 Sum_probs=69.5
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHH-HcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEE
Q 048013 95 PETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-KLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 173 (216)
Q Consensus 95 ~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 173 (216)
++.+++|+|+|.+|+.+++.++.+|++ |++++++.++.+.+. .++......+ . +. +.+.+.. ..+|++|
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa~-V~v~d~~~~~~~~l~~~~g~~v~~~~-~---~~-~~l~~~l----~~aDvVI 235 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGAT-VTILDINIDRLRQLDAEFGGRIHTRY-S---NA-YEIEDAV----KRADLLI 235 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCCe-EEEEECCHHHHHHHHHhcCceeEecc-C---CH-HHHHHHH----ccCCEEE
Confidence 345699999999999999999999995 999999988877664 4554322111 1 11 1222221 3689999
Q ss_pred EcCC---C--HH-HHHHHHHHhhcCCEEEEeccCCC
Q 048013 174 DCAG---F--NK-TMSTALSATRAGGKVCLVGMGHR 203 (216)
Q Consensus 174 ~~~g---~--~~-~~~~~~~~l~~~G~~v~~g~~~~ 203 (216)
++++ . +. ..+..++.+++++.++.++...+
T Consensus 236 ~a~~~~g~~~p~lit~~~l~~mk~g~vIvDva~d~G 271 (370)
T TIGR00518 236 GAVLIPGAKAPKLVSNSLVAQMKPGAVIVDVAIDQG 271 (370)
T ss_pred EccccCCCCCCcCcCHHHHhcCCCCCEEEEEecCCC
Confidence 9983 2 11 24778888999999999986544
No 143
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=98.39 E-value=3.9e-06 Score=66.63 Aligned_cols=116 Identities=18% Similarity=0.303 Sum_probs=80.5
Q ss_pred HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHH----cCCC-EEEeCCCCcccHHHHHHHHH
Q 048013 88 CRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKK----LGAD-NIVKVSTNLQDIAEEVEKIQ 162 (216)
Q Consensus 88 l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~~~~~~ 162 (216)
+++.++++|+++|-+|+|- |.+++.+|+..|++ |+.++-+++..+.+++ .|.. .+...-. ++ +.+
T Consensus 65 ~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v~-V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~---d~----rd~- 134 (283)
T COG2230 65 LEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGVT-VVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQ---DY----RDF- 134 (283)
T ss_pred HHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCCE-EEEeeCCHHHHHHHHHHHHHcCCCcccEEEec---cc----ccc-
Confidence 4788999999999999976 77888899999994 9999999988766644 5555 2211111 11 111
Q ss_pred HHcCCCccEEEE-----cCCC---HHHHHHHHHHhhcCCEEEEeccCCCCCcc-cchhhhhcC
Q 048013 163 KAMGTGIDVSFD-----CAGF---NKTMSTALSATRAGGKVCLVGMGHREMTV-PLTPAAASF 216 (216)
Q Consensus 163 ~~~~~~~d~vi~-----~~g~---~~~~~~~~~~l~~~G~~v~~g~~~~~~~~-~~~~~~~~~ 216 (216)
...||-|+. .+|. ++.+..+.+.|+|+|++.+..+.....+. ...+++.+|
T Consensus 135 ---~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~~~~~~~~~~~~i~~y 194 (283)
T COG2230 135 ---EEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITGPDQEFRRFPDFIDKY 194 (283)
T ss_pred ---ccccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecCCCcccccchHHHHHh
Confidence 123776653 4444 46778899999999999988876655444 666666653
No 144
>PRK08324 short chain dehydrogenase; Validated
Probab=98.39 E-value=6.1e-06 Score=74.29 Aligned_cols=142 Identities=22% Similarity=0.274 Sum_probs=86.1
Q ss_pred CccceeEEecCCceEECCCCCCchhhhcchhhHHHHHHHHHcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcC
Q 048013 50 GCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDV 128 (216)
Q Consensus 50 g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~ 128 (216)
.++.+|..+++..++.+ +..+.+++.+.. .-.....+++++||+|+ |++|..+++.+...|++ |+++++
T Consensus 385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~--------~~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~-Vvl~~r 454 (681)
T PRK08324 385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQR--------MPKPKPLAGKVALVTGAAGGIGKATAKRLAAEGAC-VVLADL 454 (681)
T ss_pred hhcCCccCCChhhhcce-eeehhhhhhhhc--------CCCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCE-EEEEeC
Confidence 34566777776666655 444444443110 00112346789999995 99999999999999994 999999
Q ss_pred ChHHHHHH-HHcCC--C-EEEeCC-CCcccHHHHHHHHHHHcCCCccEEEEcCCC-------------------------
Q 048013 129 DDYRLSVA-KKLGA--D-NIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGF------------------------- 178 (216)
Q Consensus 129 ~~~~~~~~-~~~g~--~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~------------------------- 178 (216)
+.++.+.+ ++++. . ..+..+ .+.+...+.+.++.+. .+++|++|+++|.
T Consensus 455 ~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~-~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~ 533 (681)
T PRK08324 455 DEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALA-FGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGH 533 (681)
T ss_pred CHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHH-cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHH
Confidence 98776654 33443 1 112212 1222333334443322 3479999999982
Q ss_pred HHHHHHHHHHhhc---CCEEEEeccCC
Q 048013 179 NKTMSTALSATRA---GGKVCLVGMGH 202 (216)
Q Consensus 179 ~~~~~~~~~~l~~---~G~~v~~g~~~ 202 (216)
...++.+++.++. +|+++.++...
T Consensus 534 ~~l~~~~~~~l~~~~~~g~iV~vsS~~ 560 (681)
T PRK08324 534 FLVAREAVRIMKAQGLGGSIVFIASKN 560 (681)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEECCcc
Confidence 1224555666665 58999988644
No 145
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=98.36 E-value=7.2e-06 Score=65.67 Aligned_cols=141 Identities=19% Similarity=0.300 Sum_probs=86.6
Q ss_pred ccceeEEecCCceEECCCCCCchhhhcchhhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 048013 51 CLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDD 130 (216)
Q Consensus 51 ~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~ 130 (216)
.|.+|..-.....+++++.+.+-++.. ++......+++.. +++++++|-.|+|+ |.++|..++ +|+..++++|.++
T Consensus 120 sw~~~~~~~~~~~i~lDPGlAFGTG~H-pTT~lcL~~Le~~-~~~g~~vlDvGcGS-GILaIAa~k-LGA~~v~g~DiDp 195 (300)
T COG2264 120 SWREYPEPSDELNIELDPGLAFGTGTH-PTTSLCLEALEKL-LKKGKTVLDVGCGS-GILAIAAAK-LGAKKVVGVDIDP 195 (300)
T ss_pred CCccCCCCCCceEEEEccccccCCCCC-hhHHHHHHHHHHh-hcCCCEEEEecCCh-hHHHHHHHH-cCCceEEEecCCH
Confidence 355443222355678888776654431 1222233444333 56999999999875 777776666 8888899999998
Q ss_pred HHHHHHHH----cCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEEcCCCH---HHHHHHHHHhhcCCEEEEeccCCC
Q 048013 131 YRLSVAKK----LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFN---KTMSTALSATRAGGKVCLVGMGHR 203 (216)
Q Consensus 131 ~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~---~~~~~~~~~l~~~G~~v~~g~~~~ 203 (216)
...+.+++ .+...... ...+. .... ..++.+|+|+-++=.. ...+...+.++|+|++++.|+...
T Consensus 196 ~AV~aa~eNa~~N~v~~~~~----~~~~~--~~~~--~~~~~~DvIVANILA~vl~~La~~~~~~lkpgg~lIlSGIl~~ 267 (300)
T COG2264 196 QAVEAARENARLNGVELLVQ----AKGFL--LLEV--PENGPFDVIVANILAEVLVELAPDIKRLLKPGGRLILSGILED 267 (300)
T ss_pred HHHHHHHHHHHHcCCchhhh----ccccc--chhh--cccCcccEEEehhhHHHHHHHHHHHHHHcCCCceEEEEeehHh
Confidence 77766644 33332000 00000 0011 1346899999877542 344677888999999999996443
No 146
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=98.33 E-value=7.6e-06 Score=66.02 Aligned_cols=129 Identities=19% Similarity=0.263 Sum_probs=77.3
Q ss_pred CceEECCCCCCchhhhcchhhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHc-
Q 048013 61 DLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKL- 139 (216)
Q Consensus 61 ~~~~~ip~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~- 139 (216)
...+.+++.+.+..+.. +........++.. .+++++||.+|+|. |.+++.+++ .|..+|+++|.++...+.+++.
T Consensus 127 ~~~i~ldpg~aFgtG~h-~tt~l~l~~l~~~-~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~ 202 (288)
T TIGR00406 127 ALIIMLDPGLAFGTGTH-PTTSLCLEWLEDL-DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNA 202 (288)
T ss_pred cEEEEECCCCcccCCCC-HHHHHHHHHHHhh-cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHH
Confidence 34455555554444321 1111222333332 45789999999987 877776665 5766799999999877766542
Q ss_pred ---CCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEEcCCCH---HHHHHHHHHhhcCCEEEEeccCC
Q 048013 140 ---GADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFN---KTMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 140 ---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~---~~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
+....+.... .+ ... ....+||+|+.+.... ..+..+.+.|+|+|.+++.|...
T Consensus 203 ~~n~~~~~~~~~~--~~----~~~---~~~~~fDlVvan~~~~~l~~ll~~~~~~LkpgG~li~sgi~~ 262 (288)
T TIGR00406 203 ELNQVSDRLQVKL--IY----LEQ---PIEGKADVIVANILAEVIKELYPQFSRLVKPGGWLILSGILE 262 (288)
T ss_pred HHcCCCcceEEEe--cc----ccc---ccCCCceEEEEecCHHHHHHHHHHHHHHcCCCcEEEEEeCcH
Confidence 2221111000 01 111 1245799999876653 34567788999999999988643
No 147
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=98.32 E-value=2.5e-06 Score=72.52 Aligned_cols=101 Identities=19% Similarity=0.282 Sum_probs=69.1
Q ss_pred CCCCCchhhhcchhhHHHHHHHHHcC----CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHH-HHHHcCC
Q 048013 67 PDNVSLEEGAMCEPLSVGVHACRRAN----IGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKKLGA 141 (216)
Q Consensus 67 p~~~~~~~aa~~~~~~~a~~~l~~~~----~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~-~~~~~g~ 141 (216)
|+.+..+.+....+.++++++++... ..++++|+|+|+|.+|.++++.++..|+..+++++++.++.+ +++++|.
T Consensus 149 ~k~v~~~t~i~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~ 228 (423)
T PRK00045 149 AKRVRTETGIGAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGG 228 (423)
T ss_pred HhhHhhhcCCCCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCC
Confidence 33333333333346777777775432 367899999999999999999999999877899999988755 6677775
Q ss_pred CEEEeCCCCcccHHHHHHHHHHHcCCCccEEEEcCCCHH
Q 048013 142 DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNK 180 (216)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~ 180 (216)
. +..+ .+ +.+. -.++|+||++++.+.
T Consensus 229 ~-~~~~----~~----~~~~----l~~aDvVI~aT~s~~ 254 (423)
T PRK00045 229 E-AIPL----DE----LPEA----LAEADIVISSTGAPH 254 (423)
T ss_pred c-EeeH----HH----HHHH----hccCCEEEECCCCCC
Confidence 3 2221 11 1221 136899999999744
No 148
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=98.31 E-value=3e-05 Score=61.30 Aligned_cols=118 Identities=20% Similarity=0.291 Sum_probs=77.2
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HHcC----CC-EEEeCCCCcccHHHHHHHHHHHcC
Q 048013 94 GPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KKLG----AD-NIVKVSTNLQDIAEEVEKIQKAMG 166 (216)
Q Consensus 94 ~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~~g----~~-~~~~~~~~~~~~~~~~~~~~~~~~ 166 (216)
..+++++|+|| +++|...++.+...|++ ++.+.|++++++.+ +++. .. .++..|-.+.+-.+.+.+.....+
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~-liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~ 82 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYN-LILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG 82 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence 46789999997 89999999999999995 99999999998765 3333 22 244443333333333333222344
Q ss_pred CCccEEEEcCCCH-------------------------HHHHHHHHHhhc--CCEEEEeccCCCCCcccchhh
Q 048013 167 TGIDVSFDCAGFN-------------------------KTMSTALSATRA--GGKVCLVGMGHREMTVPLTPA 212 (216)
Q Consensus 167 ~~~d~vi~~~g~~-------------------------~~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~ 212 (216)
..+|+.++++|-- ......++-|.. .|.++.+|...+..+.|....
T Consensus 83 ~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~av 155 (265)
T COG0300 83 GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAV 155 (265)
T ss_pred CcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHH
Confidence 5899999999941 123444444433 589999987666665555443
No 149
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.30 E-value=1.9e-05 Score=59.83 Aligned_cols=117 Identities=15% Similarity=0.198 Sum_probs=82.7
Q ss_pred CCCEEEEEcC--CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHH-HcCCCEE-EeCCCCcccHHHHHHHHHHHcCCCcc
Q 048013 95 PETNVLIMGS--GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-KLGADNI-VKVSTNLQDIAEEVEKIQKAMGTGID 170 (216)
Q Consensus 95 ~~~~vlv~Ga--g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~-~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d 170 (216)
..+.|||.|+ |++|.+.+.-....|+ .|+++.|..+....+. .+|.... +++ +.+++..+...++.+-..++.|
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV-~~~~~V~~v~~evr~~~~Gkld 83 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDV-SKPEEVVTVSGEVRANPDGKLD 83 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEecc-CChHHHHHHHHHHhhCCCCceE
Confidence 4578899984 8999999988888999 4999999988877665 6776543 233 3444555555555543466899
Q ss_pred EEEEcCCCH-------------------------HHHHHHHHH-hhcCCEEEEeccCCCCCcccchhhh
Q 048013 171 VSFDCAGFN-------------------------KTMSTALSA-TRAGGKVCLVGMGHREMTVPLTPAA 213 (216)
Q Consensus 171 ~vi~~~g~~-------------------------~~~~~~~~~-l~~~G~~v~~g~~~~~~~~~~~~~~ 213 (216)
+.++++|.+ .+.++.... .+..|+++.+|....-+++++..++
T Consensus 84 ~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf~~iY 152 (289)
T KOG1209|consen 84 LLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPFGSIY 152 (289)
T ss_pred EEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccchhhhh
Confidence 999998863 122333333 4778999999977776777776654
No 150
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=98.28 E-value=5.1e-06 Score=66.87 Aligned_cols=138 Identities=19% Similarity=0.335 Sum_probs=82.0
Q ss_pred ccceeEEecCCceEECCCCCCchhhhcchhhHHHHHHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 048013 51 CLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDD 130 (216)
Q Consensus 51 ~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~ 130 (216)
.|.+|-.-+...++.|++.+.|-.+..- +......+++.. .+++++||-+|+|. |.+++..++ +|++.|+++|.++
T Consensus 119 ~w~~~~~~~~~~~I~idPg~AFGTG~H~-TT~lcl~~l~~~-~~~g~~vLDvG~GS-GILaiaA~k-lGA~~v~a~DiDp 194 (295)
T PF06325_consen 119 SWEEYPEPPDEIVIEIDPGMAFGTGHHP-TTRLCLELLEKY-VKPGKRVLDVGCGS-GILAIAAAK-LGAKKVVAIDIDP 194 (295)
T ss_dssp TT----SSTTSEEEEESTTSSS-SSHCH-HHHHHHHHHHHH-SSTTSEEEEES-TT-SHHHHHHHH-TTBSEEEEEESSC
T ss_pred CCcccCCCCCcEEEEECCCCcccCCCCH-HHHHHHHHHHHh-ccCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEecCCH
Confidence 3555522345667888888877665521 222234445444 67889999999864 666666666 7998899999999
Q ss_pred HHHHHHHH----cCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEEcCCCHH---HHHHHHHHhhcCCEEEEeccCCC
Q 048013 131 YRLSVAKK----LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNK---TMSTALSATRAGGKVCLVGMGHR 203 (216)
Q Consensus 131 ~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~---~~~~~~~~l~~~G~~v~~g~~~~ 203 (216)
...+.+++ .+....+.... ..+ ....+||+|+-++-... ......+.|+|+|.+++.|+...
T Consensus 195 ~Av~~a~~N~~~N~~~~~~~v~~-~~~----------~~~~~~dlvvANI~~~vL~~l~~~~~~~l~~~G~lIlSGIl~~ 263 (295)
T PF06325_consen 195 LAVEAARENAELNGVEDRIEVSL-SED----------LVEGKFDLVVANILADVLLELAPDIASLLKPGGYLILSGILEE 263 (295)
T ss_dssp HHHHHHHHHHHHTT-TTCEEESC-TSC----------TCCS-EEEEEEES-HHHHHHHHHHCHHHEEEEEEEEEEEEEGG
T ss_pred HHHHHHHHHHHHcCCCeeEEEEE-ecc----------cccccCCEEEECCCHHHHHHHHHHHHHhhCCCCEEEEccccHH
Confidence 87766544 34433221111 111 01357999999888732 23445667899999999997544
No 151
>PRK05993 short chain dehydrogenase; Provisional
Probab=98.28 E-value=2.5e-05 Score=62.47 Aligned_cols=107 Identities=15% Similarity=0.211 Sum_probs=70.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEE-eCCCCcccHHHHHHHHHHHcCCCccEE
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIV-KVSTNLQDIAEEVEKIQKAMGTGIDVS 172 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~v 172 (216)
.+++++|+|+ |++|..+++.+...|++ |++++++.++.+.+.+.+...+. ++ .+.++..+.+.++.+..+..+|++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~-Vi~~~r~~~~~~~l~~~~~~~~~~Dl-~d~~~~~~~~~~~~~~~~g~id~l 80 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWR-VFATCRKEEDVAALEAEGLEAFQLDY-AEPESIAALVAQVLELSGGRLDAL 80 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHCCceEEEccC-CCHHHHHHHHHHHHHHcCCCccEE
Confidence 4578999996 99999999999889995 89999998887777665544332 22 222333344444433334579999
Q ss_pred EEcCCCH----------H---------------HHHHHHHHhhc--CCEEEEeccCCC
Q 048013 173 FDCAGFN----------K---------------TMSTALSATRA--GGKVCLVGMGHR 203 (216)
Q Consensus 173 i~~~g~~----------~---------------~~~~~~~~l~~--~G~~v~~g~~~~ 203 (216)
|++.|.. + ..+.+++.+.. .|+++.++...+
T Consensus 81 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~ 138 (277)
T PRK05993 81 FNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILG 138 (277)
T ss_pred EECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhh
Confidence 9998631 0 13456666644 478998875433
No 152
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.24 E-value=1.3e-05 Score=64.01 Aligned_cols=103 Identities=25% Similarity=0.410 Sum_probs=72.1
Q ss_pred HcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCC-eEEEEcCChHHHHHHHH----cCCCEEEeCCCCcccHHHHHHHHHHH
Q 048013 90 RANIGPETNVLIMGSGPIGLVTMLAARAFGAP-RIVIVDVDDYRLSVAKK----LGADNIVKVSTNLQDIAEEVEKIQKA 164 (216)
Q Consensus 90 ~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~-~vv~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~ 164 (216)
...++++++||.+|+|+ |..++.+++..|.. +|+++|.+++.++.+++ ++...+... ..+ +.++. .
T Consensus 72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~---~~d----~~~l~-~ 142 (272)
T PRK11873 72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFR---LGE----IEALP-V 142 (272)
T ss_pred hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEE---Ecc----hhhCC-C
Confidence 45678999999999887 88888888877753 69999999998888765 343322111 112 12221 1
Q ss_pred cCCCccEEEEcC------CCHHHHHHHHHHhhcCCEEEEeccC
Q 048013 165 MGTGIDVSFDCA------GFNKTMSTALSATRAGGKVCLVGMG 201 (216)
Q Consensus 165 ~~~~~d~vi~~~------g~~~~~~~~~~~l~~~G~~v~~g~~ 201 (216)
....||+|+... .....++.+.+.|+|+|++++.++.
T Consensus 143 ~~~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~ 185 (272)
T PRK11873 143 ADNSVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVV 185 (272)
T ss_pred CCCceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEee
Confidence 235799998654 2246789999999999999988754
No 153
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=98.24 E-value=7.3e-06 Score=58.57 Aligned_cols=98 Identities=19% Similarity=0.207 Sum_probs=63.7
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HHcCCCE--EEeCCCCcccHHHHHHHHHHHcCCCc
Q 048013 93 IGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KKLGADN--IVKVSTNLQDIAEEVEKIQKAMGTGI 169 (216)
Q Consensus 93 ~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (216)
--++++++|+|+|++|.+++..+...|++.+.++.|+.++.+.+ ++++... ...++ +. .+. -..+
T Consensus 9 ~l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~----~~----~~~----~~~~ 76 (135)
T PF01488_consen 9 DLKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLE----DL----EEA----LQEA 76 (135)
T ss_dssp TGTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGG----GH----CHH----HHTE
T ss_pred CcCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHH----HH----HHH----HhhC
Confidence 34689999999999999999999999998899999999886654 5664432 22321 11 111 1259
Q ss_pred cEEEEcCCCHHH--HHHHHHHhhc-CCEEEEeccCC
Q 048013 170 DVSFDCAGFNKT--MSTALSATRA-GGKVCLVGMGH 202 (216)
Q Consensus 170 d~vi~~~g~~~~--~~~~~~~l~~-~G~~v~~g~~~ 202 (216)
|++|++++.... .+..+....+ -+.++.++.+.
T Consensus 77 DivI~aT~~~~~~i~~~~~~~~~~~~~~v~Dla~Pr 112 (135)
T PF01488_consen 77 DIVINATPSGMPIITEEMLKKASKKLRLVIDLAVPR 112 (135)
T ss_dssp SEEEE-SSTTSTSSTHHHHTTTCHHCSEEEES-SS-
T ss_pred CeEEEecCCCCcccCHHHHHHHHhhhhceeccccCC
Confidence 999999997322 1222222222 25888888643
No 154
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=98.20 E-value=2.2e-05 Score=58.38 Aligned_cols=103 Identities=21% Similarity=0.348 Sum_probs=73.0
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH----HHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 048013 89 RRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KKLGADNIVKVSTNLQDIAEEVEKIQKA 164 (216)
Q Consensus 89 ~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 164 (216)
-...+++++.++-+|+|. |..++++++..-..+|++++++++..+.. ++||.+++..+.. +..+.+.++
T Consensus 28 s~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g---~Ap~~L~~~--- 100 (187)
T COG2242 28 SKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEG---DAPEALPDL--- 100 (187)
T ss_pred HhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEec---cchHhhcCC---
Confidence 446789999999899875 77888888554444799999999987765 4589887655432 222233221
Q ss_pred cCCCccEEEEcCCC--HHHHHHHHHHhhcCCEEEEecc
Q 048013 165 MGTGIDVSFDCAGF--NKTMSTALSATRAGGKVCLVGM 200 (216)
Q Consensus 165 ~~~~~d~vi~~~g~--~~~~~~~~~~l~~~G~~v~~g~ 200 (216)
..+|.+|-.=|. +..++.++..|+++|++|.--.
T Consensus 101 --~~~daiFIGGg~~i~~ile~~~~~l~~ggrlV~nai 136 (187)
T COG2242 101 --PSPDAIFIGGGGNIEEILEAAWERLKPGGRLVANAI 136 (187)
T ss_pred --CCCCEEEECCCCCHHHHHHHHHHHcCcCCeEEEEee
Confidence 258998843332 4678999999999999997654
No 155
>PRK06182 short chain dehydrogenase; Validated
Probab=98.19 E-value=7.6e-05 Score=59.51 Aligned_cols=81 Identities=23% Similarity=0.257 Sum_probs=56.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEE-eCCCCcccHHHHHHHHHHHcCCCccEE
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIV-KVSTNLQDIAEEVEKIQKAMGTGIDVS 172 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~v 172 (216)
++++++|+|+ |++|..+++.+...|++ |++++++.++++.+...+...+. ++ .+.+++.+.+.++.+ ...++|++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~-V~~~~r~~~~l~~~~~~~~~~~~~Dv-~~~~~~~~~~~~~~~-~~~~id~l 78 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYT-VYGAARRVDKMEDLASLGVHPLSLDV-TDEASIKAAVDTIIA-EEGRIDVL 78 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHhCCCeEEEeeC-CCHHHHHHHHHHHHH-hcCCCCEE
Confidence 3578999996 89999999999889995 88899998877666554544322 22 223334444444433 23479999
Q ss_pred EEcCCC
Q 048013 173 FDCAGF 178 (216)
Q Consensus 173 i~~~g~ 178 (216)
|+++|.
T Consensus 79 i~~ag~ 84 (273)
T PRK06182 79 VNNAGY 84 (273)
T ss_pred EECCCc
Confidence 999984
No 156
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=98.11 E-value=3.4e-05 Score=59.54 Aligned_cols=98 Identities=23% Similarity=0.292 Sum_probs=66.1
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEE
Q 048013 94 GPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 173 (216)
Q Consensus 94 ~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 173 (216)
-++.+||-+|+|+ |+++.-+|+ +|+ .|+++|.+++..+.++.-.....+.++-.. . .++++.. .++.||+|+
T Consensus 58 l~g~~vLDvGCGg-G~Lse~mAr-~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~-~---~~edl~~-~~~~FDvV~ 129 (243)
T COG2227 58 LPGLRVLDVGCGG-GILSEPLAR-LGA-SVTGIDASEKPIEVAKLHALESGVNIDYRQ-A---TVEDLAS-AGGQFDVVT 129 (243)
T ss_pred CCCCeEEEecCCc-cHhhHHHHH-CCC-eeEEecCChHHHHHHHHhhhhccccccchh-h---hHHHHHh-cCCCccEEE
Confidence 4789999999875 667666666 788 499999999999888754333322211111 1 2333321 347899998
Q ss_pred E-----cCCCH-HHHHHHHHHhhcCCEEEEec
Q 048013 174 D-----CAGFN-KTMSTALSATRAGGKVCLVG 199 (216)
Q Consensus 174 ~-----~~g~~-~~~~~~~~~l~~~G~~v~~g 199 (216)
. .+.++ ..+..+.++++|+|.+++.=
T Consensus 130 cmEVlEHv~dp~~~~~~c~~lvkP~G~lf~ST 161 (243)
T COG2227 130 CMEVLEHVPDPESFLRACAKLVKPGGILFLST 161 (243)
T ss_pred EhhHHHccCCHHHHHHHHHHHcCCCcEEEEec
Confidence 6 34443 35678999999999988654
No 157
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=98.10 E-value=3.5e-06 Score=74.23 Aligned_cols=80 Identities=24% Similarity=0.421 Sum_probs=56.4
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC---------------------hHHHHHHHHcCCCEEEeCCCC
Q 048013 92 NIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVD---------------------DYRLSVAKKLGADNIVKVSTN 150 (216)
Q Consensus 92 ~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~---------------------~~~~~~~~~~g~~~~~~~~~~ 150 (216)
..+.+++|+|+|+|+.|+++++.++..|++ |++++.. +.+++.++++|++..++....
T Consensus 133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~~-V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~ 211 (564)
T PRK12771 133 APDTGKRVAVIGGGPAGLSAAYHLRRMGHA-VTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG 211 (564)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCe-EEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence 357889999999999999999999999996 8888742 345667788898765542110
Q ss_pred cccHHHHHHHHHHHcCCCccEEEEcCCCH
Q 048013 151 LQDIAEEVEKIQKAMGTGIDVSFDCAGFN 179 (216)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~d~vi~~~g~~ 179 (216)
.+.. ..++ ..++|++|+++|..
T Consensus 212 -~~~~--~~~~----~~~~D~Vi~AtG~~ 233 (564)
T PRK12771 212 -EDIT--LEQL----EGEFDAVFVAIGAQ 233 (564)
T ss_pred -CcCC--HHHH----HhhCCEEEEeeCCC
Confidence 1210 1111 12599999999974
No 158
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=98.09 E-value=2.3e-05 Score=66.64 Aligned_cols=93 Identities=19% Similarity=0.270 Sum_probs=71.8
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEE
Q 048013 93 IGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 172 (216)
Q Consensus 93 ~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 172 (216)
.-.|++++|+|.|.+|..+++.++.+|++ |++++++..+...+...|.... + +.++. ...|++
T Consensus 251 ~LaGKtVgVIG~G~IGr~vA~rL~a~Ga~-ViV~e~dp~~a~~A~~~G~~~~--------~----leell----~~ADIV 313 (476)
T PTZ00075 251 MIAGKTVVVCGYGDVGKGCAQALRGFGAR-VVVTEIDPICALQAAMEGYQVV--------T----LEDVV----ETADIF 313 (476)
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEeCCchhHHHHHhcCceec--------c----HHHHH----hcCCEE
Confidence 45799999999999999999999999994 8889888766545544554321 1 12221 258999
Q ss_pred EEcCCCHHHH-HHHHHHhhcCCEEEEeccCC
Q 048013 173 FDCAGFNKTM-STALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 173 i~~~g~~~~~-~~~~~~l~~~G~~v~~g~~~ 202 (216)
+.++|....+ ...+..|++++.++.+|...
T Consensus 314 I~atGt~~iI~~e~~~~MKpGAiLINvGr~d 344 (476)
T PTZ00075 314 VTATGNKDIITLEHMRRMKNNAIVGNIGHFD 344 (476)
T ss_pred EECCCcccccCHHHHhccCCCcEEEEcCCCc
Confidence 9999986666 58999999999999999653
No 159
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.08 E-value=0.00019 Score=57.32 Aligned_cols=116 Identities=22% Similarity=0.308 Sum_probs=77.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH----HHcCCCE-EEeCC---CCcccHHHHHHHHHHHc
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KKLGADN-IVKVS---TNLQDIAEEVEKIQKAM 165 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~----~~~g~~~-~~~~~---~~~~~~~~~~~~~~~~~ 165 (216)
.++.|+|.|| +++|.+.+.-....|++ ++.+.+..++++.. ++.+..+ ++.+. .+.++..+.+.++..+
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~~-l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~- 88 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGAK-LVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRH- 88 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCc-eEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHh-
Confidence 5789999997 79999888877788996 55555666555444 4444443 33221 2223344444443323
Q ss_pred CCCccEEEEcCCCH-------------------------HHHHHHHHHhhcC--CEEEEeccCCCCCcccchhh
Q 048013 166 GTGIDVSFDCAGFN-------------------------KTMSTALSATRAG--GKVCLVGMGHREMTVPLTPA 212 (216)
Q Consensus 166 ~~~~d~vi~~~g~~-------------------------~~~~~~~~~l~~~--G~~v~~g~~~~~~~~~~~~~ 212 (216)
-+++|+.++++|-. ...+.+++.|+.. |+++.++...+..++|..++
T Consensus 89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~ 162 (282)
T KOG1205|consen 89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSI 162 (282)
T ss_pred cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcccc
Confidence 35899999999852 1457888888654 99999998888777777653
No 160
>PRK05693 short chain dehydrogenase; Provisional
Probab=98.06 E-value=0.00025 Score=56.55 Aligned_cols=79 Identities=23% Similarity=0.279 Sum_probs=54.5
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEE-EeCCCCcccHHHHHHHHHHHcCCCccEEEE
Q 048013 97 TNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNI-VKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 174 (216)
Q Consensus 97 ~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 174 (216)
+++||+|+ |++|..+++.+...|++ |++++++.++.+.+...+...+ .++ .+.++..+.+.++.+ ...++|++|+
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~-~~~~id~vi~ 78 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYE-VWATARKAEDVEALAAAGFTAVQLDV-NDGAALARLAEELEA-EHGGLDVLIN 78 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHCCCeEEEeeC-CCHHHHHHHHHHHHH-hcCCCCEEEE
Confidence 47899996 89999999999989995 8889998877776655554332 232 222344444444432 2357999999
Q ss_pred cCCC
Q 048013 175 CAGF 178 (216)
Q Consensus 175 ~~g~ 178 (216)
++|.
T Consensus 79 ~ag~ 82 (274)
T PRK05693 79 NAGY 82 (274)
T ss_pred CCCC
Confidence 9983
No 161
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=98.06 E-value=0.00015 Score=55.16 Aligned_cols=103 Identities=22% Similarity=0.380 Sum_probs=70.8
Q ss_pred HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChHHHHHHH----HcC-CCEEEeCCCCcccHHHHHHHH
Q 048013 88 CRRANIGPETNVLIMGSGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAK----KLG-ADNIVKVSTNLQDIAEEVEKI 161 (216)
Q Consensus 88 l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~-~~vv~~~~~~~~~~~~~----~~g-~~~~~~~~~~~~~~~~~~~~~ 161 (216)
+....+.++++++.+|+|. |..++.+++..+. .+|+++|.+++..+.++ .++ .+.+..+. .+..+.+..
T Consensus 33 l~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~---~d~~~~l~~- 107 (198)
T PRK00377 33 LSKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK---GEAPEILFT- 107 (198)
T ss_pred HHHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE---echhhhHhh-
Confidence 3456788999999999987 8888888887642 36999999988877553 456 33332221 222222222
Q ss_pred HHHcCCCccEEEEcCCC---HHHHHHHHHHhhcCCEEEEe
Q 048013 162 QKAMGTGIDVSFDCAGF---NKTMSTALSATRAGGKVCLV 198 (216)
Q Consensus 162 ~~~~~~~~d~vi~~~g~---~~~~~~~~~~l~~~G~~v~~ 198 (216)
....+|.||...+. ...++.+.+.|+|+|+++..
T Consensus 108 ---~~~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 144 (198)
T PRK00377 108 ---INEKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVID 144 (198)
T ss_pred ---cCCCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEEE
Confidence 23479999986553 35678888999999999853
No 162
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=98.01 E-value=0.00011 Score=61.63 Aligned_cols=104 Identities=21% Similarity=0.280 Sum_probs=70.7
Q ss_pred HHHH-HHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHH
Q 048013 85 VHAC-RRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQK 163 (216)
Q Consensus 85 ~~~l-~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 163 (216)
+..+ +...++++++||.+|+|. |..++.+++..|+ +|+++|.+++..+.+++......+.+ ...++ .++
T Consensus 156 ~~~l~~~l~l~~g~rVLDIGcG~-G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~--~~~D~----~~l-- 225 (383)
T PRK11705 156 LDLICRKLQLKPGMRVLDIGCGW-GGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEI--RLQDY----RDL-- 225 (383)
T ss_pred HHHHHHHhCCCCCCEEEEeCCCc-cHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEE--EECch----hhc--
Confidence 3444 667789999999999864 7777888888888 49999999999888866432111111 11122 111
Q ss_pred HcCCCccEEEEc-----CCC---HHHHHHHHHHhhcCCEEEEecc
Q 048013 164 AMGTGIDVSFDC-----AGF---NKTMSTALSATRAGGKVCLVGM 200 (216)
Q Consensus 164 ~~~~~~d~vi~~-----~g~---~~~~~~~~~~l~~~G~~v~~g~ 200 (216)
...||.|+.. ++. ...++.+.+.|+|+|++++..+
T Consensus 226 --~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~i 268 (383)
T PRK11705 226 --NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHTI 268 (383)
T ss_pred --CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 3469998753 333 3567888899999999987644
No 163
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.01 E-value=0.00034 Score=54.40 Aligned_cols=106 Identities=21% Similarity=0.201 Sum_probs=67.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HHcC---CCEEEeCCCC-cccHHHHHHHHHHHcCCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KKLG---ADNIVKVSTN-LQDIAEEVEKIQKAMGTG 168 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~~g---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 168 (216)
.+++++|+|+ |++|..+++.+...|++ |+.+++++++.+.+ +++. ....+..+-. .+...+.+++.... -.+
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~ 81 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQ-VCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKV-LNA 81 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHH-hCC
Confidence 4679999996 89999999999999995 88999988876655 3322 1122222211 22233333333221 246
Q ss_pred ccEEEEcCCCH-----------------------HHHHHHHHHhhcCCEEEEeccCC
Q 048013 169 IDVSFDCAGFN-----------------------KTMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 169 ~d~vi~~~g~~-----------------------~~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
+|.++.+.+.. ...+..++.++.+|+++.++...
T Consensus 82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~ 138 (238)
T PRK05786 82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS 138 (238)
T ss_pred CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence 89999988741 12455666677789999888543
No 164
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.92 E-value=0.00053 Score=51.82 Aligned_cols=106 Identities=21% Similarity=0.282 Sum_probs=71.9
Q ss_pred CCCEEEEEc-CCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCC---EEEeCCCCcccHHHHHHHHHHHcCCCcc
Q 048013 95 PETNVLIMG-SGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGAD---NIVKVSTNLQDIAEEVEKIQKAMGTGID 170 (216)
Q Consensus 95 ~~~~vlv~G-ag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~d 170 (216)
-|.+|||.| ++++|+..++-...+|=+ ||+..|++++++.++..-.. .+.++ .+.+..+.+-++........+
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~-VIi~gR~e~~L~e~~~~~p~~~t~v~Dv--~d~~~~~~lvewLkk~~P~lN 80 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNT-VIICGRNEERLAEAKAENPEIHTEVCDV--ADRDSRRELVEWLKKEYPNLN 80 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCE-EEEecCcHHHHHHHHhcCcchheeeecc--cchhhHHHHHHHHHhhCCchh
Confidence 478999997 589999999999999874 99999999999988764432 23333 223333344444444455689
Q ss_pred EEEEcCCCH---------------------------HHHHHHHHHh--hcCCEEEEeccCCC
Q 048013 171 VSFDCAGFN---------------------------KTMSTALSAT--RAGGKVCLVGMGHR 203 (216)
Q Consensus 171 ~vi~~~g~~---------------------------~~~~~~~~~l--~~~G~~v~~g~~~~ 203 (216)
++++++|-. ......++.| +|.+.++.++..-.
T Consensus 81 vliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLa 142 (245)
T COG3967 81 VLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLA 142 (245)
T ss_pred eeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccc
Confidence 999999852 1234555555 34688888875433
No 165
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=97.89 E-value=0.00025 Score=59.49 Aligned_cols=96 Identities=19% Similarity=0.262 Sum_probs=68.0
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHH-HHHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEE
Q 048013 94 GPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 172 (216)
Q Consensus 94 ~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 172 (216)
-.++++||+|+|-||.++++.+...|.+.++++.|+.++-+ ++++++...+ .++ + +... -..+|+|
T Consensus 176 L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~-~l~----e----l~~~----l~~~DvV 242 (414)
T COG0373 176 LKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV-ALE----E----LLEA----LAEADVV 242 (414)
T ss_pred cccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee-cHH----H----HHHh----hhhCCEE
Confidence 46789999999999999999999999888999999988854 6788995432 211 1 2211 1359999
Q ss_pred EEcCCCHHHH---HHHHHHhhcC-C-EEEEeccCC
Q 048013 173 FDCAGFNKTM---STALSATRAG-G-KVCLVGMGH 202 (216)
Q Consensus 173 i~~~g~~~~~---~~~~~~l~~~-G-~~v~~g~~~ 202 (216)
|.+++.+... ....+.+++. . .++.+++|.
T Consensus 243 issTsa~~~ii~~~~ve~a~~~r~~~livDiavPR 277 (414)
T COG0373 243 ISSTSAPHPIITREMVERALKIRKRLLIVDIAVPR 277 (414)
T ss_pred EEecCCCccccCHHHHHHHHhcccCeEEEEecCCC
Confidence 9999985432 3444455543 3 456777655
No 166
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.89 E-value=0.00027 Score=57.80 Aligned_cols=103 Identities=24% Similarity=0.318 Sum_probs=72.5
Q ss_pred HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChHHHHHHH----HcCCCEEEeCCCCcccHHHHHHHH
Q 048013 87 ACRRANIGPETNVLIMGSGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAK----KLGADNIVKVSTNLQDIAEEVEKI 161 (216)
Q Consensus 87 ~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~-~~vv~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~ 161 (216)
.++...++++++||.+|+|. |..++.+++..+. ..|++++.+++..+.++ +.+.+.+.... .+..+...
T Consensus 72 ll~~L~i~~g~~VLDIG~Gt-G~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~---gD~~~~~~-- 145 (322)
T PRK13943 72 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC---GDGYYGVP-- 145 (322)
T ss_pred HHHhcCCCCCCEEEEEeCCc-cHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe---CChhhccc--
Confidence 34556788999999999974 8888899987763 25899999988665543 46665544321 22222111
Q ss_pred HHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEe
Q 048013 162 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV 198 (216)
Q Consensus 162 ~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~ 198 (216)
....+|+|+.+.+........++.|+++|+++..
T Consensus 146 ---~~~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~ 179 (322)
T PRK13943 146 ---EFAPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP 179 (322)
T ss_pred ---ccCCccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence 1246999999988766667888999999998763
No 167
>PRK06139 short chain dehydrogenase; Provisional
Probab=97.88 E-value=0.00063 Score=56.01 Aligned_cols=82 Identities=27% Similarity=0.362 Sum_probs=54.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH----HHcCCCEE-EeCC-CCcccHHHHHHHHHHHcCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KKLGADNI-VKVS-TNLQDIAEEVEKIQKAMGT 167 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~----~~~g~~~~-~~~~-~~~~~~~~~~~~~~~~~~~ 167 (216)
+++++||+|+ |++|..+++.+...|++ |+.+++++++++.+ ++.+.... +..| .+.++..+.+.++.+ ..+
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~-Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~-~~g 83 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGAR-LVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAAS-FGG 83 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH-hcC
Confidence 5689999996 89999999999999995 88899998876543 33454432 2211 122333333444332 235
Q ss_pred CccEEEEcCCC
Q 048013 168 GIDVSFDCAGF 178 (216)
Q Consensus 168 ~~d~vi~~~g~ 178 (216)
++|++|+++|.
T Consensus 84 ~iD~lVnnAG~ 94 (330)
T PRK06139 84 RIDVWVNNVGV 94 (330)
T ss_pred CCCEEEECCCc
Confidence 79999999983
No 168
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.87 E-value=0.00046 Score=53.17 Aligned_cols=103 Identities=20% Similarity=0.258 Sum_probs=69.4
Q ss_pred HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChHHHHHHHH----cCCCEEEeCCCCcccHHHHHHHH
Q 048013 87 ACRRANIGPETNVLIMGSGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKK----LGADNIVKVSTNLQDIAEEVEKI 161 (216)
Q Consensus 87 ~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~-~~vv~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~ 161 (216)
.++...++++++||-+|+|. |..++.+++..+. ..|+.++.+++-.+.+++ .+...+..... +..+. +
T Consensus 68 ~~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~g---d~~~~---~ 140 (212)
T PRK13942 68 MCELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVG---DGTLG---Y 140 (212)
T ss_pred HHHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEEC---CcccC---C
Confidence 34566788999999999875 7777778877653 269999999887765543 45443322111 11100 1
Q ss_pred HHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEe
Q 048013 162 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV 198 (216)
Q Consensus 162 ~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~ 198 (216)
....+||.|+-........+..++.|+++|+++..
T Consensus 141 --~~~~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~ 175 (212)
T PRK13942 141 --EENAPYDRIYVTAAGPDIPKPLIEQLKDGGIMVIP 175 (212)
T ss_pred --CcCCCcCEEEECCCcccchHHHHHhhCCCcEEEEE
Confidence 12357999987666556678889999999998764
No 169
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=97.86 E-value=0.00049 Score=47.78 Aligned_cols=103 Identities=23% Similarity=0.343 Sum_probs=68.2
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHH----HcCCCEEEeCCCCcccHHHHHHHHHHH
Q 048013 89 RRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK----KLGADNIVKVSTNLQDIAEEVEKIQKA 164 (216)
Q Consensus 89 ~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~ 164 (216)
+...+.++++++.+|+|. |..+..+++..+..+++++|.++...+.++ .++...+..... +.......
T Consensus 13 ~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~---~~~~~~~~---- 84 (124)
T TIGR02469 13 SKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEG---DAPEALED---- 84 (124)
T ss_pred HHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEec---cccccChh----
Confidence 445667788999999876 888888888765446999999988776653 344433222111 11111111
Q ss_pred cCCCccEEEEcCCC---HHHHHHHHHHhhcCCEEEEec
Q 048013 165 MGTGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVG 199 (216)
Q Consensus 165 ~~~~~d~vi~~~g~---~~~~~~~~~~l~~~G~~v~~g 199 (216)
....+|.|+..... ...++.+.+.|+|+|++++..
T Consensus 85 ~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 122 (124)
T TIGR02469 85 SLPEPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLNA 122 (124)
T ss_pred hcCCCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEEe
Confidence 13479999976543 346788999999999998754
No 170
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=97.84 E-value=7.9e-05 Score=57.19 Aligned_cols=105 Identities=26% Similarity=0.346 Sum_probs=69.6
Q ss_pred HHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCC-eEEEEcCChHHHHHH----HHcCCCEEEeCCCCcccHHHHHHH
Q 048013 86 HACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAP-RIVIVDVDDYRLSVA----KKLGADNIVKVSTNLQDIAEEVEK 160 (216)
Q Consensus 86 ~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~-~vv~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~ 160 (216)
.+++...++++++||-+|+|. |..++-+++..|.. .|+.++++++-.+.+ ++++..++..... |....
T Consensus 63 ~~l~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~g---dg~~g--- 135 (209)
T PF01135_consen 63 RMLEALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVG---DGSEG--- 135 (209)
T ss_dssp HHHHHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES----GGGT---
T ss_pred HHHHHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEc---chhhc---
Confidence 455777899999999999875 78888888877753 588999988655444 4456654433211 11111
Q ss_pred HHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEE-ec
Q 048013 161 IQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCL-VG 199 (216)
Q Consensus 161 ~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~-~g 199 (216)
+ ....+||.|+-+.+.+......++.|+++|+++. ++
T Consensus 136 ~--~~~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~pi~ 173 (209)
T PF01135_consen 136 W--PEEAPFDRIIVTAAVPEIPEALLEQLKPGGRLVAPIG 173 (209)
T ss_dssp T--GGG-SEEEEEESSBBSS--HHHHHTEEEEEEEEEEES
T ss_pred c--ccCCCcCEEEEeeccchHHHHHHHhcCCCcEEEEEEc
Confidence 1 1235799999998887777889999999999986 44
No 171
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.83 E-value=0.00097 Score=53.26 Aligned_cols=107 Identities=19% Similarity=0.247 Sum_probs=66.1
Q ss_pred CCCEEEEEcC-C--HHHHHHHHHHHHcCCCeEEEEcCChHHHH---HH-HHcCCCEEEeCC-CCcccHHHHHHHHHHHcC
Q 048013 95 PETNVLIMGS-G--PIGLVTMLAARAFGAPRIVIVDVDDYRLS---VA-KKLGADNIVKVS-TNLQDIAEEVEKIQKAMG 166 (216)
Q Consensus 95 ~~~~vlv~Ga-g--~~G~~~i~~a~~~g~~~vv~~~~~~~~~~---~~-~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~ 166 (216)
+++++||+|+ + ++|.++++.+...|++ |+.++++++..+ .+ ++++....+..| .+.++..+.+.++.+..
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~-V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~- 83 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAE-LAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKW- 83 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCE-EEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHh-
Confidence 5688999997 4 8999999999999995 777777653322 22 334533222222 12233444445544333
Q ss_pred CCccEEEEcCCCH--------------H---------------HHHHHHHHhhcCCEEEEeccCCC
Q 048013 167 TGIDVSFDCAGFN--------------K---------------TMSTALSATRAGGKVCLVGMGHR 203 (216)
Q Consensus 167 ~~~d~vi~~~g~~--------------~---------------~~~~~~~~l~~~G~~v~~g~~~~ 203 (216)
+.+|++++++|.. + ..+.+++.|..+|+++.++....
T Consensus 84 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~ 149 (271)
T PRK06505 84 GKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGS 149 (271)
T ss_pred CCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCc
Confidence 4799999998831 0 12445566666789988875443
No 172
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.80 E-value=0.00018 Score=53.86 Aligned_cols=89 Identities=20% Similarity=0.213 Sum_probs=60.8
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEE
Q 048013 94 GPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 173 (216)
Q Consensus 94 ~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 173 (216)
-.+++|.|+|.|.+|..+++.++.+|+ +|++.+++..........+... .++.+.+. ..|+|+
T Consensus 34 l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~~--------~~l~ell~--------~aDiv~ 96 (178)
T PF02826_consen 34 LRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVEY--------VSLDELLA--------QADIVS 96 (178)
T ss_dssp STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEEE--------SSHHHHHH--------H-SEEE
T ss_pred cCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhccccccee--------eehhhhcc--------hhhhhh
Confidence 468999999999999999999999999 4999999887665444444421 12222221 378888
Q ss_pred EcCCCHH-----HHHHHHHHhhcCCEEEEec
Q 048013 174 DCAGFNK-----TMSTALSATRAGGKVCLVG 199 (216)
Q Consensus 174 ~~~g~~~-----~~~~~~~~l~~~G~~v~~g 199 (216)
.+....+ .-...+..|+++..+|.++
T Consensus 97 ~~~plt~~T~~li~~~~l~~mk~ga~lvN~a 127 (178)
T PF02826_consen 97 LHLPLTPETRGLINAEFLAKMKPGAVLVNVA 127 (178)
T ss_dssp E-SSSSTTTTTSBSHHHHHTSTTTEEEEESS
T ss_pred hhhccccccceeeeeeeeeccccceEEEecc
Confidence 8777421 1256778888888888776
No 173
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=97.78 E-value=0.00023 Score=48.66 Aligned_cols=93 Identities=27% Similarity=0.388 Sum_probs=62.5
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHH-cCCCeEEEEcCChHHHHHHHHc----CC-CEEEeCCCCcccHHHHHHHHHHHcCCC
Q 048013 95 PETNVLIMGSGPIGLVTMLAARA-FGAPRIVIVDVDDYRLSVAKKL----GA-DNIVKVSTNLQDIAEEVEKIQKAMGTG 168 (216)
Q Consensus 95 ~~~~vlv~Gag~~G~~~i~~a~~-~g~~~vv~~~~~~~~~~~~~~~----g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (216)
|+.+||.+|+|. |..++.+++. .++ +++++|.+++..+.+++. +. ..+..+. .++ .... ....+
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~---~d~-~~~~----~~~~~ 70 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQ---GDA-EFDP----DFLEP 70 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEE---SCC-HGGT----TTSSC
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEE---Ccc-ccCc----ccCCC
Confidence 578999999875 7788888884 566 599999999888777542 22 2222211 222 1111 13457
Q ss_pred ccEEEEcC-CC---------HHHHHHHHHHhhcCCEEEE
Q 048013 169 IDVSFDCA-GF---------NKTMSTALSATRAGGKVCL 197 (216)
Q Consensus 169 ~d~vi~~~-g~---------~~~~~~~~~~l~~~G~~v~ 197 (216)
||+|+... .. ...++.+.+.|+|+|++++
T Consensus 71 ~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi 109 (112)
T PF12847_consen 71 FDLVICSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVI 109 (112)
T ss_dssp EEEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCEEEECCCccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence 99999877 21 1246888899999999985
No 174
>PRK12742 oxidoreductase; Provisional
Probab=97.78 E-value=0.0011 Score=51.52 Aligned_cols=102 Identities=18% Similarity=0.263 Sum_probs=62.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcC-ChHHHHHH-HHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccE
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDV-DDYRLSVA-KKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 171 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~-~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 171 (216)
.++++||+|+ |++|..+++.+...|++ |+.+.+ ++++.+.+ ++++...+ ..+.. +.. .+.++.+. ..++|+
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~-v~~~~~~~~~~~~~l~~~~~~~~~-~~D~~--~~~-~~~~~~~~-~~~id~ 78 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGAN-VRFTYAGSKDAAERLAQETGATAV-QTDSA--DRD-AVIDVVRK-SGALDI 78 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEecCCCHHHHHHHHHHhCCeEE-ecCCC--CHH-HHHHHHHH-hCCCcE
Confidence 4689999996 89999999999999995 666543 44444433 44554432 22221 211 12222222 246999
Q ss_pred EEEcCCCH----------H---------------HHHHHHHHhhcCCEEEEeccCC
Q 048013 172 SFDCAGFN----------K---------------TMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 172 vi~~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
+|+++|.. + ..+.+++.++.+|+++.++...
T Consensus 79 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~ 134 (237)
T PRK12742 79 LVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVN 134 (237)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccc
Confidence 99998741 0 1134445566788999887543
No 175
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.77 E-value=0.00047 Score=57.48 Aligned_cols=99 Identities=16% Similarity=0.180 Sum_probs=65.0
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcC---CCEEEeCCCCcccHHHHHHHHHHHcCCCccEEE
Q 048013 97 TNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLG---ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 173 (216)
Q Consensus 97 ~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 173 (216)
.+|||+|+|.+|+.+++.+.+.+-..|.+.+++.++.+.+.... ... +.++..+. . .+.++. .++|+||
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~-~~vD~~d~--~-al~~li----~~~d~VI 73 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEA-LQVDAADV--D-ALVALI----KDFDLVI 73 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhcccccee-EEecccCh--H-HHHHHH----hcCCEEE
Confidence 47899999999999999988888446999999998888876553 222 22222221 1 232322 2469999
Q ss_pred EcCCCHHHHHHHHHH-hhcCCEEEEeccCCCC
Q 048013 174 DCAGFNKTMSTALSA-TRAGGKVCLVGMGHRE 204 (216)
Q Consensus 174 ~~~g~~~~~~~~~~~-l~~~G~~v~~g~~~~~ 204 (216)
++.+..-. ..+++. ++.+=.++........
T Consensus 74 n~~p~~~~-~~i~ka~i~~gv~yvDts~~~~~ 104 (389)
T COG1748 74 NAAPPFVD-LTILKACIKTGVDYVDTSYYEEP 104 (389)
T ss_pred EeCCchhh-HHHHHHHHHhCCCEEEcccCCch
Confidence 99998444 355544 4445567777654443
No 176
>PRK08339 short chain dehydrogenase; Provisional
Probab=97.75 E-value=0.0015 Score=51.81 Aligned_cols=106 Identities=15% Similarity=0.175 Sum_probs=67.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHH-Hc----CCC-EEEeCCC-CcccHHHHHHHHHHHcC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-KL----GAD-NIVKVST-NLQDIAEEVEKIQKAMG 166 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~-~~----g~~-~~~~~~~-~~~~~~~~~~~~~~~~~ 166 (216)
.++++||.|+ +++|.++++.+...|++ |++++++.++.+.+. ++ +.. ..+..+- +.++..+.++++. . -
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~-~-~ 83 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGAD-VILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK-N-I 83 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH-h-h
Confidence 4789999996 89999999999999995 888899887755432 22 322 1222221 2223334444442 2 2
Q ss_pred CCccEEEEcCCCH----------H---------------HHHHHHHHhhc--CCEEEEeccCCC
Q 048013 167 TGIDVSFDCAGFN----------K---------------TMSTALSATRA--GGKVCLVGMGHR 203 (216)
Q Consensus 167 ~~~d~vi~~~g~~----------~---------------~~~~~~~~l~~--~G~~v~~g~~~~ 203 (216)
+++|++++++|.. + ..+.+++.|.. .|+++.++....
T Consensus 84 g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~ 147 (263)
T PRK08339 84 GEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAI 147 (263)
T ss_pred CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccc
Confidence 4699999998741 0 23556666643 489998875443
No 177
>PRK07109 short chain dehydrogenase; Provisional
Probab=97.75 E-value=0.0017 Score=53.54 Aligned_cols=107 Identities=20% Similarity=0.276 Sum_probs=67.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH----HHcCCCEE-EeCC-CCcccHHHHHHHHHHHcCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KKLGADNI-VKVS-TNLQDIAEEVEKIQKAMGT 167 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~----~~~g~~~~-~~~~-~~~~~~~~~~~~~~~~~~~ 167 (216)
++++++|+|+ |++|..+++.+...|++ |+++++++++.+.+ ++.+.... +..| .+.++..+.+.++.+.. .
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~-Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~-g 84 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAK-VVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEEL-G 84 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHC-C
Confidence 4678999996 89999999999889995 88888988765543 33454322 2112 12223333344433223 3
Q ss_pred CccEEEEcCCCH-------------------------HHHHHHHHHhhc--CCEEEEeccCCC
Q 048013 168 GIDVSFDCAGFN-------------------------KTMSTALSATRA--GGKVCLVGMGHR 203 (216)
Q Consensus 168 ~~d~vi~~~g~~-------------------------~~~~~~~~~l~~--~G~~v~~g~~~~ 203 (216)
++|++|+++|.. ...+.+++.+.. .|+++.++....
T Consensus 85 ~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~ 147 (334)
T PRK07109 85 PIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALA 147 (334)
T ss_pred CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhh
Confidence 799999999841 022345666654 589998886444
No 178
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=97.75 E-value=0.00055 Score=52.83 Aligned_cols=104 Identities=20% Similarity=0.230 Sum_probs=68.7
Q ss_pred HHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChHHHHHHH----HcCCCEEEeCCCCcccHHHHHHH
Q 048013 86 HACRRANIGPETNVLIMGSGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAK----KLGADNIVKVSTNLQDIAEEVEK 160 (216)
Q Consensus 86 ~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~-~~vv~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~ 160 (216)
.+++...++++++||-+|+|. |..++.+++..+. ..|+.++.+++..+.++ +++.+.+.... .+..+..
T Consensus 68 ~~~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~---~d~~~~~-- 141 (215)
T TIGR00080 68 MMTELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIV---GDGTQGW-- 141 (215)
T ss_pred HHHHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEE---CCcccCC--
Confidence 344566788999999999875 6677777777653 25999999988766553 35554332211 1211111
Q ss_pred HHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEe
Q 048013 161 IQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV 198 (216)
Q Consensus 161 ~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~ 198 (216)
....+||+|+-........+...+.|+++|+++..
T Consensus 142 ---~~~~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~ 176 (215)
T TIGR00080 142 ---EPLAPYDRIYVTAAGPKIPEALIDQLKEGGILVMP 176 (215)
T ss_pred ---cccCCCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence 11347999887655556667888999999998754
No 179
>PRK07825 short chain dehydrogenase; Provisional
Probab=97.75 E-value=0.0015 Score=51.92 Aligned_cols=81 Identities=27% Similarity=0.298 Sum_probs=53.7
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HHcCCCEEEeCCC-CcccHHHHHHHHHHHcCCCccEE
Q 048013 96 ETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KKLGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS 172 (216)
Q Consensus 96 ~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~v 172 (216)
+++++|+|+ |++|..+++.+...|++ |+++++++++.+.+ ++++....+..|- +.+++.+.+.++.+.. .++|++
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id~l 82 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGAR-VAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADL-GPIDVL 82 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHc-CCCCEE
Confidence 578999996 89999999988889995 88888988876644 4444222222222 2233344444443322 479999
Q ss_pred EEcCCC
Q 048013 173 FDCAGF 178 (216)
Q Consensus 173 i~~~g~ 178 (216)
|.++|.
T Consensus 83 i~~ag~ 88 (273)
T PRK07825 83 VNNAGV 88 (273)
T ss_pred EECCCc
Confidence 999884
No 180
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.73 E-value=0.0022 Score=51.39 Aligned_cols=106 Identities=18% Similarity=0.242 Sum_probs=67.6
Q ss_pred CCCEEEEEcC---CHHHHHHHHHHHHcCCCeEEEEcCChH---HHHHH-HHcCCCEEEeCCC-CcccHHHHHHHHHHHcC
Q 048013 95 PETNVLIMGS---GPIGLVTMLAARAFGAPRIVIVDVDDY---RLSVA-KKLGADNIVKVST-NLQDIAEEVEKIQKAMG 166 (216)
Q Consensus 95 ~~~~vlv~Ga---g~~G~~~i~~a~~~g~~~vv~~~~~~~---~~~~~-~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~ 166 (216)
.++++||+|+ +++|.++++.+...|++ |+.++++++ +.+.+ ++++....+..|- +.+...+.+.++.+..
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~-Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~- 81 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAE-LAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDL- 81 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCE-EEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHc-
Confidence 4689999985 48999999999889995 888888753 22322 3455432222222 2233444445544333
Q ss_pred CCccEEEEcCCCH--------------H---------------HHHHHHHHhhcCCEEEEeccCC
Q 048013 167 TGIDVSFDCAGFN--------------K---------------TMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 167 ~~~d~vi~~~g~~--------------~---------------~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
+++|++++++|.. + ..+.+++.|..+|+++.++...
T Consensus 82 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~ 146 (274)
T PRK08415 82 GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLG 146 (274)
T ss_pred CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCC
Confidence 4799999999831 0 2456677777789999887543
No 181
>PRK07326 short chain dehydrogenase; Provisional
Probab=97.72 E-value=0.0018 Score=50.27 Aligned_cols=82 Identities=27% Similarity=0.268 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HHcCC-C--EEEeCC-CCcccHHHHHHHHHHHcCCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KKLGA-D--NIVKVS-TNLQDIAEEVEKIQKAMGTG 168 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~~g~-~--~~~~~~-~~~~~~~~~~~~~~~~~~~~ 168 (216)
.+++++|+|+ |.+|..+++.+...|++ |++++++.++.+.+ +++.. . ..+..+ .+..+..+.+.++.+. ..+
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~ 82 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYK-VAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAA-FGG 82 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCE-EEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHH-cCC
Confidence 4688999996 99999999988888995 88899988765543 33321 1 122212 1222333344444322 247
Q ss_pred ccEEEEcCCC
Q 048013 169 IDVSFDCAGF 178 (216)
Q Consensus 169 ~d~vi~~~g~ 178 (216)
+|++|.+.+.
T Consensus 83 ~d~vi~~ag~ 92 (237)
T PRK07326 83 LDVLIANAGV 92 (237)
T ss_pred CCEEEECCCC
Confidence 9999998864
No 182
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.72 E-value=0.00066 Score=49.62 Aligned_cols=96 Identities=19% Similarity=0.290 Sum_probs=63.1
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEE
Q 048013 93 IGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 172 (216)
Q Consensus 93 ~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 172 (216)
.-.|++++|.|-|.+|.-.++.++.+|++ |++++.++-+.-.+..-|.. +.. +.+. -...|++
T Consensus 20 ~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga~-V~V~e~DPi~alqA~~dGf~-v~~-----------~~~a----~~~adi~ 82 (162)
T PF00670_consen 20 MLAGKRVVVIGYGKVGKGIARALRGLGAR-VTVTEIDPIRALQAAMDGFE-VMT-----------LEEA----LRDADIF 82 (162)
T ss_dssp --TTSEEEEE--SHHHHHHHHHHHHTT-E-EEEE-SSHHHHHHHHHTT-E-EE------------HHHH----TTT-SEE
T ss_pred eeCCCEEEEeCCCcccHHHHHHHhhCCCE-EEEEECChHHHHHhhhcCcE-ecC-----------HHHH----HhhCCEE
Confidence 56899999999999999999999999994 99999998665555444443 221 2222 2358999
Q ss_pred EEcCCCHHH-HHHHHHHhhcCCEEEEeccCCCCC
Q 048013 173 FDCAGFNKT-MSTALSATRAGGKVCLVGMGHREM 205 (216)
Q Consensus 173 i~~~g~~~~-~~~~~~~l~~~G~~v~~g~~~~~~ 205 (216)
|.++|..+. ..+-++.|+++..+..+|....++
T Consensus 83 vtaTG~~~vi~~e~~~~mkdgail~n~Gh~d~Ei 116 (162)
T PF00670_consen 83 VTATGNKDVITGEHFRQMKDGAILANAGHFDVEI 116 (162)
T ss_dssp EE-SSSSSSB-HHHHHHS-TTEEEEESSSSTTSB
T ss_pred EECCCCccccCHHHHHHhcCCeEEeccCcCceeE
Confidence 999998554 367888999999988888544333
No 183
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.71 E-value=0.00089 Score=49.92 Aligned_cols=91 Identities=18% Similarity=0.271 Sum_probs=63.1
Q ss_pred EEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEEcCC
Q 048013 99 VLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 177 (216)
Q Consensus 99 vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 177 (216)
|+|.|+ |.+|..+++.+...|. .|+++.|++++.+. ..+.+ ++..+- .+. +.+.+.. .++|+||.+++
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~-~~~~d~--~d~-~~~~~al----~~~d~vi~~~~ 69 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVE-IIQGDL--FDP-DSVKAAL----KGADAVIHAAG 69 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEE-EEESCT--TCH-HHHHHHH----TTSSEEEECCH
T ss_pred eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccc-cceeee--hhh-hhhhhhh----hhcchhhhhhh
Confidence 688997 9999999999999997 59999999887766 33333 222222 222 2233321 27999999999
Q ss_pred C----HHHHHHHHHHhhcCC--EEEEecc
Q 048013 178 F----NKTMSTALSATRAGG--KVCLVGM 200 (216)
Q Consensus 178 ~----~~~~~~~~~~l~~~G--~~v~~g~ 200 (216)
. .+..+..++.++..| +++.++.
T Consensus 70 ~~~~~~~~~~~~~~a~~~~~~~~~v~~s~ 98 (183)
T PF13460_consen 70 PPPKDVDAAKNIIEAAKKAGVKRVVYLSS 98 (183)
T ss_dssp STTTHHHHHHHHHHHHHHTTSSEEEEEEE
T ss_pred hhcccccccccccccccccccccceeeec
Confidence 4 355677777776665 7777764
No 184
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.71 E-value=0.0014 Score=56.16 Aligned_cols=81 Identities=25% Similarity=0.354 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCh--HHHH-HHHHcCCCEE-EeCCCCcccHHHHHHHHHHHcCCCc
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDD--YRLS-VAKKLGADNI-VKVSTNLQDIAEEVEKIQKAMGTGI 169 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~--~~~~-~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (216)
+++++||+|+ |++|..+++.+...|++ +++++++. ++.+ ..++++...+ .++ .+.....+.+..+.+. ..++
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga~-vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv-~~~~~~~~~~~~~~~~-~g~i 285 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGAH-VVCLDVPAAGEALAAVANRVGGTALALDI-TAPDAPARIAEHLAER-HGGL 285 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCE-EEEEeCCccHHHHHHHHHHcCCeEEEEeC-CCHHHHHHHHHHHHHh-CCCC
Confidence 4688999996 99999999999999995 88887743 3333 3344554432 232 1222233333333322 3479
Q ss_pred cEEEEcCCC
Q 048013 170 DVSFDCAGF 178 (216)
Q Consensus 170 d~vi~~~g~ 178 (216)
|++|.++|.
T Consensus 286 d~vi~~AG~ 294 (450)
T PRK08261 286 DIVVHNAGI 294 (450)
T ss_pred CEEEECCCc
Confidence 999999983
No 185
>PRK12939 short chain dehydrogenase; Provisional
Probab=97.70 E-value=0.002 Score=50.31 Aligned_cols=82 Identities=15% Similarity=0.128 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HH---cCCC-EEEeCCCCc-ccHHHHHHHHHHHcCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KK---LGAD-NIVKVSTNL-QDIAEEVEKIQKAMGT 167 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~---~g~~-~~~~~~~~~-~~~~~~~~~~~~~~~~ 167 (216)
++++++|+|+ |++|..++..+...|++ ++++++++++.+.. ++ .+.. ..+..+-.+ ++..+.+.++.+ ...
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~~ 83 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGAT-VAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAA-ALG 83 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH-HcC
Confidence 4788999996 99999999999989995 88888887765433 22 2322 222222222 222233333322 224
Q ss_pred CccEEEEcCCC
Q 048013 168 GIDVSFDCAGF 178 (216)
Q Consensus 168 ~~d~vi~~~g~ 178 (216)
++|++|.++|.
T Consensus 84 ~id~vi~~ag~ 94 (250)
T PRK12939 84 GLDGLVNNAGI 94 (250)
T ss_pred CCCEEEECCCC
Confidence 79999999985
No 186
>PRK05872 short chain dehydrogenase; Provisional
Probab=97.70 E-value=0.0017 Score=52.50 Aligned_cols=81 Identities=28% Similarity=0.441 Sum_probs=55.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HHcCCC-EE----EeCCCCcccHHHHHHHHHHHcCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KKLGAD-NI----VKVSTNLQDIAEEVEKIQKAMGT 167 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~~g~~-~~----~~~~~~~~~~~~~~~~~~~~~~~ 167 (216)
+++++||+|+ |++|..+++.+...|++ |+++++++++.+.+ ++++.. .+ .++ .+.++..+.+.++.+.. .
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~~-g 84 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAK-LALVDLEEAELAALAAELGGDDRVLTVVADV-TDLAAMQAAAEEAVERF-G 84 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhcCCCcEEEEEecC-CCHHHHHHHHHHHHHHc-C
Confidence 5789999996 89999999999999995 88899988876644 445421 11 122 12233344444443322 4
Q ss_pred CccEEEEcCCC
Q 048013 168 GIDVSFDCAGF 178 (216)
Q Consensus 168 ~~d~vi~~~g~ 178 (216)
++|++|+++|.
T Consensus 85 ~id~vI~nAG~ 95 (296)
T PRK05872 85 GIDVVVANAGI 95 (296)
T ss_pred CCCEEEECCCc
Confidence 79999999984
No 187
>PRK08017 oxidoreductase; Provisional
Probab=97.69 E-value=0.00053 Score=53.93 Aligned_cols=80 Identities=20% Similarity=0.314 Sum_probs=54.5
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEE-eCCCCcccHHHHHHHHHHHcCCCccEEEE
Q 048013 97 TNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIV-KVSTNLQDIAEEVEKIQKAMGTGIDVSFD 174 (216)
Q Consensus 97 ~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 174 (216)
++++|+|+ |++|..+++.+...|++ |++++++.++.+.+++.+..... ++ .+.....+.+..+....+..+|.++.
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~~~~~~ii~ 80 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYR-VLAACRKPDDVARMNSLGFTGILLDL-DDPESVERAADEVIALTDNRLYGLFN 80 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHhHHHHhCCCeEEEeec-CCHHHHHHHHHHHHHhcCCCCeEEEE
Confidence 57999997 99999999999989985 88899998888777766654332 22 12222233333332223457899998
Q ss_pred cCCC
Q 048013 175 CAGF 178 (216)
Q Consensus 175 ~~g~ 178 (216)
+.|.
T Consensus 81 ~ag~ 84 (256)
T PRK08017 81 NAGF 84 (256)
T ss_pred CCCC
Confidence 8773
No 188
>PRK08265 short chain dehydrogenase; Provisional
Probab=97.69 E-value=0.0018 Score=51.32 Aligned_cols=106 Identities=21% Similarity=0.235 Sum_probs=67.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HHcCCCE-EEeCC-CCcccHHHHHHHHHHHcCCCcc
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KKLGADN-IVKVS-TNLQDIAEEVEKIQKAMGTGID 170 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~~g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~d 170 (216)
.+++++|.|+ |++|..+++.+...|++ |++++++.++.+.+ ++++... .+..+ .+.++..+.+.++.+.. ..+|
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g~id 82 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGAR-VAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARF-GRVD 82 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHh-CCCC
Confidence 4689999996 89999999999999994 89999988765543 4454322 12222 12233344444443332 4699
Q ss_pred EEEEcCCCH---------H---------------HHHHHHHHh-hcCCEEEEeccCC
Q 048013 171 VSFDCAGFN---------K---------------TMSTALSAT-RAGGKVCLVGMGH 202 (216)
Q Consensus 171 ~vi~~~g~~---------~---------------~~~~~~~~l-~~~G~~v~~g~~~ 202 (216)
+++.+.|.. + ..+.+++.| +.+|+++.++...
T Consensus 83 ~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~ 139 (261)
T PRK08265 83 ILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSIS 139 (261)
T ss_pred EEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchh
Confidence 999998741 0 223444555 5678999887543
No 189
>PRK12828 short chain dehydrogenase; Provisional
Probab=97.68 E-value=0.0019 Score=49.97 Aligned_cols=81 Identities=20% Similarity=0.160 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHH-H---HHcCCCEEE-eCCCCcccHHHHHHHHHHHcCCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-A---KKLGADNIV-KVSTNLQDIAEEVEKIQKAMGTG 168 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~-~---~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 168 (216)
+++++||+|+ |.+|..+++.+...|++ |+.++++.++... + +..+...+. ++ .+.++..+.+.++.+. -.+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~~~ 82 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGAR-VALIGRGAAPLSQTLPGVPADALRIGGIDL-VDPQAARRAVDEVNRQ-FGR 82 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCe-EEEEeCChHhHHHHHHHHhhcCceEEEeec-CCHHHHHHHHHHHHHH-hCC
Confidence 4789999996 99999999999888995 8999887765332 2 222332221 22 1222333333333322 247
Q ss_pred ccEEEEcCCC
Q 048013 169 IDVSFDCAGF 178 (216)
Q Consensus 169 ~d~vi~~~g~ 178 (216)
+|++|.+++.
T Consensus 83 ~d~vi~~ag~ 92 (239)
T PRK12828 83 LDALVNIAGA 92 (239)
T ss_pred cCEEEECCcc
Confidence 9999998874
No 190
>PRK08267 short chain dehydrogenase; Provisional
Probab=97.68 E-value=0.0015 Score=51.60 Aligned_cols=81 Identities=23% Similarity=0.328 Sum_probs=52.4
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHH-HcC-CC-EEEeCCC-CcccHHHHHHHHHHHcCCCccE
Q 048013 97 TNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-KLG-AD-NIVKVST-NLQDIAEEVEKIQKAMGTGIDV 171 (216)
Q Consensus 97 ~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~-~~g-~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~ 171 (216)
+++||+|+ |++|..+++.+...|++ |++++++.++.+.+. .++ .. ..+..|- +..+..+.+.++.+....++|+
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~ 80 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWR-VGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV 80 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence 57899996 89999999988889985 888899888766553 333 11 1222222 2223333344433222457999
Q ss_pred EEEcCCC
Q 048013 172 SFDCAGF 178 (216)
Q Consensus 172 vi~~~g~ 178 (216)
++.++|.
T Consensus 81 vi~~ag~ 87 (260)
T PRK08267 81 LFNNAGI 87 (260)
T ss_pred EEECCCC
Confidence 9999985
No 191
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.68 E-value=0.001 Score=53.08 Aligned_cols=108 Identities=20% Similarity=0.326 Sum_probs=70.0
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHH----HHHHHHcCCC--EEEeCCCCcccHHHHHHHHHHHcC
Q 048013 94 GPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYR----LSVAKKLGAD--NIVKVSTNLQDIAEEVEKIQKAMG 166 (216)
Q Consensus 94 ~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~----~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~ 166 (216)
-+|+.|||+|+ +++|.+.++=....|++ ++..|.+++. .+..++.|-. ...++ ++.++..+..+++.++.|
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~-~vl~Din~~~~~etv~~~~~~g~~~~y~cdi-s~~eei~~~a~~Vk~e~G 113 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAK-LVLWDINKQGNEETVKEIRKIGEAKAYTCDI-SDREEIYRLAKKVKKEVG 113 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCe-EEEEeccccchHHHHHHHHhcCceeEEEecC-CCHHHHHHHHHHHHHhcC
Confidence 46889999996 69999987777778884 8888888754 3333444422 22233 233455555556655544
Q ss_pred CCccEEEEcCCCH----------H---------------HHHHHHHHh--hcCCEEEEeccCCCC
Q 048013 167 TGIDVSFDCAGFN----------K---------------TMSTALSAT--RAGGKVCLVGMGHRE 204 (216)
Q Consensus 167 ~~~d~vi~~~g~~----------~---------------~~~~~~~~l--~~~G~~v~~g~~~~~ 204 (216)
.+|++++++|-. + ..++.+..| .++|.+|.++...+.
T Consensus 114 -~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~ 177 (300)
T KOG1201|consen 114 -DVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGL 177 (300)
T ss_pred -CceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcc
Confidence 899999999952 1 224444544 368999998765543
No 192
>PRK07814 short chain dehydrogenase; Provisional
Probab=97.68 E-value=0.0026 Score=50.39 Aligned_cols=82 Identities=17% Similarity=0.247 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHH-H---cCCCE-EEeCCC-CcccHHHHHHHHHHHcCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-K---LGADN-IVKVST-NLQDIAEEVEKIQKAMGT 167 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~-~---~g~~~-~~~~~~-~~~~~~~~~~~~~~~~~~ 167 (216)
+++++||+|+ |++|..+++.+...|+ +|++++++.++.+.+. . .+... .+..+- +.+...+.+.++.+.. .
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~ 86 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAF-G 86 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence 5789999996 8999999999999999 5888999887655432 2 23221 222222 2222333334433222 4
Q ss_pred CccEEEEcCCC
Q 048013 168 GIDVSFDCAGF 178 (216)
Q Consensus 168 ~~d~vi~~~g~ 178 (216)
++|++|.++|.
T Consensus 87 ~id~vi~~Ag~ 97 (263)
T PRK07814 87 RLDIVVNNVGG 97 (263)
T ss_pred CCCEEEECCCC
Confidence 79999999873
No 193
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.68 E-value=0.0023 Score=50.42 Aligned_cols=104 Identities=19% Similarity=0.204 Sum_probs=63.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcC-ChHHHHHHHHcCCCEEEeCC-CCcccHHHHHHHHHHHcCCCccE
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDV-DDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDV 171 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~-~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~ 171 (216)
.+++++|+|+ |++|..+++.+...|++ |+++.+ +++..+.++..+... +..+ .+.++..+.+.++.+. ..++|+
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~-v~~~~~~~~~~~~~l~~~~~~~-~~~Dl~~~~~~~~~~~~~~~~-~~~id~ 82 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAK-VAVLYNSAENEAKELREKGVFT-IKCDVGNRDQVKKSKEVVEKE-FGRVDV 82 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCcHHHHHHHHhCCCeE-EEecCCCHHHHHHHHHHHHHH-cCCCCE
Confidence 4688999996 89999999999889996 665544 444444444433322 2212 2223344444444332 247999
Q ss_pred EEEcCCCH----------H---------------HHHHHHHHhh--cCCEEEEeccC
Q 048013 172 SFDCAGFN----------K---------------TMSTALSATR--AGGKVCLVGMG 201 (216)
Q Consensus 172 vi~~~g~~----------~---------------~~~~~~~~l~--~~G~~v~~g~~ 201 (216)
+|.++|.. + ..+.+++.+. ..|+++.++..
T Consensus 83 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~ 139 (255)
T PRK06463 83 LVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASN 139 (255)
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCH
Confidence 99998741 0 1345556664 45889888753
No 194
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=97.67 E-value=0.00011 Score=54.49 Aligned_cols=103 Identities=17% Similarity=0.251 Sum_probs=68.4
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeC-CCC--------------cccHHHHHH
Q 048013 95 PETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKV-STN--------------LQDIAEEVE 159 (216)
Q Consensus 95 ~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~-~~~--------------~~~~~~~~~ 159 (216)
++.+|+|+|+|.+|..++.+++.+|++ +++.+...++++..+..+...+... ... .+.....+.
T Consensus 19 ~p~~vvv~G~G~vg~gA~~~~~~lGa~-v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 97 (168)
T PF01262_consen 19 PPAKVVVTGAGRVGQGAAEIAKGLGAE-VVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA 97 (168)
T ss_dssp -T-EEEEESTSHHHHHHHHHHHHTT-E-EEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred CCeEEEEECCCHHHHHHHHHHhHCCCE-EEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence 347899999999999999999999995 9999999998888888777654331 110 122222333
Q ss_pred HHHHHcCCCccEEEEcCC--C---HH-HHHHHHHHhhcCCEEEEeccCC
Q 048013 160 KIQKAMGTGIDVSFDCAG--F---NK-TMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 160 ~~~~~~~~~~d~vi~~~g--~---~~-~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
+.. ..+|++|.+.- + +. ..+..++.|+++..++.++...
T Consensus 98 ~~i----~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D~ 142 (168)
T PF01262_consen 98 EFI----APADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCDQ 142 (168)
T ss_dssp HHH----HH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGGG
T ss_pred HHH----hhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEecC
Confidence 321 25899886332 1 11 2377888999999999997533
No 195
>PRK08177 short chain dehydrogenase; Provisional
Probab=97.66 E-value=0.0018 Score=50.07 Aligned_cols=78 Identities=19% Similarity=0.229 Sum_probs=51.0
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCc-ccHHHHHHHHHHHcCCCccEEEE
Q 048013 97 TNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVSFD 174 (216)
Q Consensus 97 ~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~vi~ 174 (216)
++++|.|+ |++|..+++.+...|++ |++++++.++.+.+++++....+..+-.+ ++..+.+.++ .+.++|++|.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~---~~~~id~vi~ 77 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQ-VTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRL---QGQRFDLLFV 77 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCE-EEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHh---hcCCCCEEEE
Confidence 57899996 99999999888889994 89999988776666554333333222222 2222233332 2347999999
Q ss_pred cCCC
Q 048013 175 CAGF 178 (216)
Q Consensus 175 ~~g~ 178 (216)
++|.
T Consensus 78 ~ag~ 81 (225)
T PRK08177 78 NAGI 81 (225)
T ss_pred cCcc
Confidence 8764
No 196
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=97.66 E-value=0.0018 Score=47.42 Aligned_cols=80 Identities=21% Similarity=0.258 Sum_probs=51.2
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCC--hHHHH-H---HHHcCCCEEEe--CC-CCcccHHHHHHHHHHHcC
Q 048013 97 TNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVD--DYRLS-V---AKKLGADNIVK--VS-TNLQDIAEEVEKIQKAMG 166 (216)
Q Consensus 97 ~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~--~~~~~-~---~~~~g~~~~~~--~~-~~~~~~~~~~~~~~~~~~ 166 (216)
++++|+|+ +++|..+++.+...|..+|+.+.++ .++.+ . ++..+ ..+.. .+ .+.++..+.++++. ...
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~-~~~ 78 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPG-AKITFIECDLSDPESIRALIEEVI-KRF 78 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTT-SEEEEEESETTSHHHHHHHHHHHH-HHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccc-cccccccccccccccccccccccc-ccc
Confidence 47899996 8999999988888877678888888 44333 2 23344 33222 22 12233444444443 234
Q ss_pred CCccEEEEcCCC
Q 048013 167 TGIDVSFDCAGF 178 (216)
Q Consensus 167 ~~~d~vi~~~g~ 178 (216)
..+|++|.+.|.
T Consensus 79 ~~ld~li~~ag~ 90 (167)
T PF00106_consen 79 GPLDILINNAGI 90 (167)
T ss_dssp SSESEEEEECSC
T ss_pred cccccccccccc
Confidence 579999999986
No 197
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=97.65 E-value=0.00017 Score=57.65 Aligned_cols=102 Identities=21% Similarity=0.360 Sum_probs=61.6
Q ss_pred HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHH----HcCCCEEEeCCCCcccHHHHHHHHH
Q 048013 87 ACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK----KLGADNIVKVSTNLQDIAEEVEKIQ 162 (216)
Q Consensus 87 ~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~ 162 (216)
.+++.++++|++||.+|+|- |..++.+++..|++ |++++.+++..+.++ +.|....+.+.. .|+ +++
T Consensus 54 ~~~~~~l~~G~~vLDiGcGw-G~~~~~~a~~~g~~-v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~--~D~----~~~- 124 (273)
T PF02353_consen 54 LCEKLGLKPGDRVLDIGCGW-GGLAIYAAERYGCH-VTGITLSEEQAEYARERIREAGLEDRVEVRL--QDY----RDL- 124 (273)
T ss_dssp HHTTTT--TT-EEEEES-TT-SHHHHHHHHHH--E-EEEEES-HHHHHHHHHHHHCSTSSSTEEEEE--S-G----GG--
T ss_pred HHHHhCCCCCCEEEEeCCCc-cHHHHHHHHHcCcE-EEEEECCHHHHHHHHHHHHhcCCCCceEEEE--eec----ccc-
Confidence 34778999999999999873 66777888888995 999999998877664 355432111101 122 122
Q ss_pred HHcCCCccEEEE-----cCCC---HHHHHHHHHHhhcCCEEEEecc
Q 048013 163 KAMGTGIDVSFD-----CAGF---NKTMSTALSATRAGGKVCLVGM 200 (216)
Q Consensus 163 ~~~~~~~d~vi~-----~~g~---~~~~~~~~~~l~~~G~~v~~g~ 200 (216)
...||.|+. .+|. +..++.+.+.|+|+|++++-.+
T Consensus 125 ---~~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq~i 167 (273)
T PF02353_consen 125 ---PGKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQTI 167 (273)
T ss_dssp -----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEEEE
T ss_pred ---CCCCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEEec
Confidence 227898765 3442 3567889999999999975443
No 198
>PRK07576 short chain dehydrogenase; Provisional
Probab=97.65 E-value=0.0033 Score=49.86 Aligned_cols=106 Identities=19% Similarity=0.250 Sum_probs=65.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH----HHcCCCE-EEeCCCC-cccHHHHHHHHHHHcCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KKLGADN-IVKVSTN-LQDIAEEVEKIQKAMGT 167 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~----~~~g~~~-~~~~~~~-~~~~~~~~~~~~~~~~~ 167 (216)
++++++|+|+ |++|..+++.+...|++ |+.++++.++.+.. .+.+... .+..+-. .++..+.++++... ..
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~-~~ 85 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGAN-VAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADE-FG 85 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence 5789999996 89999999999999995 88888887664432 2223221 2222222 22333334444322 34
Q ss_pred CccEEEEcCCCH-------------------------HHHHHHHHHhh-cCCEEEEeccCC
Q 048013 168 GIDVSFDCAGFN-------------------------KTMSTALSATR-AGGKVCLVGMGH 202 (216)
Q Consensus 168 ~~d~vi~~~g~~-------------------------~~~~~~~~~l~-~~G~~v~~g~~~ 202 (216)
++|++|.+.|.. ..++.+++.++ .+|+++.++...
T Consensus 86 ~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~ 146 (264)
T PRK07576 86 PIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQ 146 (264)
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChh
Confidence 799999988630 12234445553 568999888643
No 199
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.64 E-value=0.0031 Score=49.87 Aligned_cols=106 Identities=17% Similarity=0.211 Sum_probs=65.7
Q ss_pred CCCEEEEEcCC---HHHHHHHHHHHHcCCCeEEEEcCChHHH---HH-HHHcCCCEEEeCC-CCcccHHHHHHHHHHHcC
Q 048013 95 PETNVLIMGSG---PIGLVTMLAARAFGAPRIVIVDVDDYRL---SV-AKKLGADNIVKVS-TNLQDIAEEVEKIQKAMG 166 (216)
Q Consensus 95 ~~~~vlv~Gag---~~G~~~i~~a~~~g~~~vv~~~~~~~~~---~~-~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~ 166 (216)
.++++||+|++ ++|.++++.+...|++ |++++++++.. +. .++++....+..| .+.++..+.+.++.+..
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~-v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~- 86 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAE-LAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEW- 86 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCE-EEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHc-
Confidence 57899999853 8999999999889995 88888875432 22 2334432222222 22233444444443333
Q ss_pred CCccEEEEcCCCH--------------H---------------HHHHHHHHhhcCCEEEEeccCC
Q 048013 167 TGIDVSFDCAGFN--------------K---------------TMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 167 ~~~d~vi~~~g~~--------------~---------------~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
+.+|++++++|.. + ..+.+++.|+.+|+++.++...
T Consensus 87 g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~ 151 (258)
T PRK07533 87 GRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYG 151 (258)
T ss_pred CCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccc
Confidence 4699999998731 0 2355666777778988877543
No 200
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.64 E-value=0.0025 Score=50.48 Aligned_cols=106 Identities=16% Similarity=0.217 Sum_probs=63.5
Q ss_pred CCCEEEEEcC-C--HHHHHHHHHHHHcCCCeEEEEcCChHHHHHH----HHcCCCEEEeCC-CCcccHHHHHHHHHHHcC
Q 048013 95 PETNVLIMGS-G--PIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KKLGADNIVKVS-TNLQDIAEEVEKIQKAMG 166 (216)
Q Consensus 95 ~~~~vlv~Ga-g--~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~----~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~ 166 (216)
.+++++|.|+ + ++|.++++.+...|++ |+..+++++..+.+ ++.+....+..| .+.++..+.+.++.+..
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~-v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~- 84 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAE-LWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKW- 84 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCE-EEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHc-
Confidence 5688999996 4 7999999888889995 77777764322222 233433222222 22233444444444333
Q ss_pred CCccEEEEcCCCH--------------H---------------HHHHHHHHhhcCCEEEEeccCC
Q 048013 167 TGIDVSFDCAGFN--------------K---------------TMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 167 ~~~d~vi~~~g~~--------------~---------------~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
+.+|++++++|.. + ..+..++.++.+|+++.++...
T Consensus 85 g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~ 149 (260)
T PRK06603 85 GSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYG 149 (260)
T ss_pred CCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCc
Confidence 4699999988731 0 1233445666779999887544
No 201
>PRK06500 short chain dehydrogenase; Provisional
Probab=97.63 E-value=0.0029 Score=49.42 Aligned_cols=82 Identities=26% Similarity=0.318 Sum_probs=53.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HHcCCCEE-EeCCC-CcccHHHHHHHHHHHcCCCcc
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KKLGADNI-VKVST-NLQDIAEEVEKIQKAMGTGID 170 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~~g~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~d 170 (216)
++++++|.|+ |++|..+++.+...|++ |+.+++++++.+.+ ++++.... +..+. +.++..+.+..+.+. ..++|
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id 82 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGAR-VAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEA-FGRLD 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHH-hCCCC
Confidence 4678999996 99999999999999995 88888887765543 44554322 21111 122222333333322 34799
Q ss_pred EEEEcCCC
Q 048013 171 VSFDCAGF 178 (216)
Q Consensus 171 ~vi~~~g~ 178 (216)
++|.++|.
T Consensus 83 ~vi~~ag~ 90 (249)
T PRK06500 83 AVFINAGV 90 (249)
T ss_pred EEEECCCC
Confidence 99999874
No 202
>PRK06484 short chain dehydrogenase; Validated
Probab=97.63 E-value=0.002 Score=56.29 Aligned_cols=107 Identities=21% Similarity=0.256 Sum_probs=70.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHH-HcCCCEE-EeCCC-CcccHHHHHHHHHHHcCCCcc
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-KLGADNI-VKVST-NLQDIAEEVEKIQKAMGTGID 170 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~-~~g~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~d 170 (216)
.++++||+|+ +++|..+++.+...|++ |+.++++.++.+.+. +++.... +..+- +.++..+.+.++.+.. +.+|
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id 345 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGDR-LLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARW-GRLD 345 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence 4678999996 89999999999999994 899999887776554 3554321 22222 2223334444443322 4699
Q ss_pred EEEEcCCCH--------------------------HHHHHHHHHhhcCCEEEEeccCCC
Q 048013 171 VSFDCAGFN--------------------------KTMSTALSATRAGGKVCLVGMGHR 203 (216)
Q Consensus 171 ~vi~~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~~~~ 203 (216)
++|.++|.. ...+.+++.|+.+|+++.++....
T Consensus 346 ~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~ 404 (520)
T PRK06484 346 VLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIAS 404 (520)
T ss_pred EEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhh
Confidence 999998741 023555666666799998885443
No 203
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.63 E-value=0.0021 Score=50.72 Aligned_cols=107 Identities=15% Similarity=0.190 Sum_probs=66.5
Q ss_pred CCCEEEEEcC---CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCE--EEeCC-CCcccHHHHHHHHHHHcCCC
Q 048013 95 PETNVLIMGS---GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADN--IVKVS-TNLQDIAEEVEKIQKAMGTG 168 (216)
Q Consensus 95 ~~~~vlv~Ga---g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~ 168 (216)
.+++++|.|+ +++|.++++.+...|++ |+.++++++..+.++++.... .+..| .+.++..+.+.++.+.. ..
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~ 83 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGAT-VIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERV-GK 83 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCE-EEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHh-CC
Confidence 5789999986 48999999999889995 888888754444444442222 12221 12233344444444333 46
Q ss_pred ccEEEEcCCCH-----------------------------HHHHHHHHHhhcCCEEEEeccCCC
Q 048013 169 IDVSFDCAGFN-----------------------------KTMSTALSATRAGGKVCLVGMGHR 203 (216)
Q Consensus 169 ~d~vi~~~g~~-----------------------------~~~~~~~~~l~~~G~~v~~g~~~~ 203 (216)
+|++++++|.. ...+..++.|+.+|+++.++....
T Consensus 84 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~ 147 (252)
T PRK06079 84 IDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGS 147 (252)
T ss_pred CCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCc
Confidence 99999988731 013445566767789888875443
No 204
>PRK14967 putative methyltransferase; Provisional
Probab=97.63 E-value=0.00048 Score=53.44 Aligned_cols=100 Identities=26% Similarity=0.347 Sum_probs=65.3
Q ss_pred HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHH----cCCCEEEeCCCCcccHHHHHHHHHH
Q 048013 88 CRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKK----LGADNIVKVSTNLQDIAEEVEKIQK 163 (216)
Q Consensus 88 l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~ 163 (216)
+....++++++||..|+|. |..++.+++. +..+++++|.+++..+.+++ .+....+. ..++.+. +
T Consensus 29 l~~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~----~~d~~~~---~-- 97 (223)
T PRK14967 29 LAAEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVR----RGDWARA---V-- 97 (223)
T ss_pred HHhcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEE----ECchhhh---c--
Confidence 4445577889999999987 8888887774 65469999999987765543 34322111 1232221 1
Q ss_pred HcCCCccEEEEcCCC---------------------------HHHHHHHHHHhhcCCEEEEec
Q 048013 164 AMGTGIDVSFDCAGF---------------------------NKTMSTALSATRAGGKVCLVG 199 (216)
Q Consensus 164 ~~~~~~d~vi~~~g~---------------------------~~~~~~~~~~l~~~G~~v~~g 199 (216)
....||+|+.+.+- ...++.+.+.|+++|+++++-
T Consensus 98 -~~~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~~ 159 (223)
T PRK14967 98 -EFRPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLVQ 159 (223)
T ss_pred -cCCCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 23579999986320 123466788999999998753
No 205
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.61 E-value=0.00042 Score=53.10 Aligned_cols=102 Identities=19% Similarity=0.236 Sum_probs=67.4
Q ss_pred HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChHHHHHHH----HcCCCE-EEeCCCCcccHHHHHHHH
Q 048013 88 CRRANIGPETNVLIMGSGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAK----KLGADN-IVKVSTNLQDIAEEVEKI 161 (216)
Q Consensus 88 l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g-~~~vv~~~~~~~~~~~~~----~~g~~~-~~~~~~~~~~~~~~~~~~ 161 (216)
++...++++++||-+|+|. |..++.+++..+ ..+|+.++.+++-.+.++ +.+... +.... .+..+.+.
T Consensus 65 ~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~---~d~~~~~~-- 138 (205)
T PRK13944 65 CELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYH---GDGKRGLE-- 138 (205)
T ss_pred HHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEE---CCcccCCc--
Confidence 4556778899999999875 777777777664 226999999987665553 344431 21111 11111110
Q ss_pred HHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEe
Q 048013 162 QKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV 198 (216)
Q Consensus 162 ~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~ 198 (216)
....||.|+-+.......+.+++.|+++|+++..
T Consensus 139 ---~~~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~ 172 (205)
T PRK13944 139 ---KHAPFDAIIVTAAASTIPSALVRQLKDGGVLVIP 172 (205)
T ss_pred ---cCCCccEEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence 1347999998777656668888999999999764
No 206
>PRK09072 short chain dehydrogenase; Provisional
Probab=97.61 E-value=0.0017 Score=51.34 Aligned_cols=81 Identities=23% Similarity=0.317 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHH-Hc--CCC-EEEeCCCCc-ccHHHHHHHHHHHcCCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-KL--GAD-NIVKVSTNL-QDIAEEVEKIQKAMGTG 168 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~-~~--g~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~ 168 (216)
++++++|+|+ |++|..+++.+...|++ |+++++++++.+.+. ++ +.. ..+..+-.+ +...+....+.+ .++
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~--~~~ 80 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGAR-LLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARARE--MGG 80 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHh--cCC
Confidence 4678999986 99999999999889995 889999887765443 22 211 122222111 222223333322 357
Q ss_pred ccEEEEcCCC
Q 048013 169 IDVSFDCAGF 178 (216)
Q Consensus 169 ~d~vi~~~g~ 178 (216)
+|+++.++|.
T Consensus 81 id~lv~~ag~ 90 (263)
T PRK09072 81 INVLINNAGV 90 (263)
T ss_pred CCEEEECCCC
Confidence 8999999875
No 207
>PRK12829 short chain dehydrogenase; Provisional
Probab=97.61 E-value=0.0025 Score=50.26 Aligned_cols=84 Identities=20% Similarity=0.241 Sum_probs=54.6
Q ss_pred CCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHH-cCCC--EEEeCCCCc-ccHHHHHHHHHHHcCC
Q 048013 93 IGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKK-LGAD--NIVKVSTNL-QDIAEEVEKIQKAMGT 167 (216)
Q Consensus 93 ~~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~-~g~~--~~~~~~~~~-~~~~~~~~~~~~~~~~ 167 (216)
.-+++++||+|+ |++|..+++.+...|++ |+.++++.+..+.+.+ .... ..+..+-.+ +...+.+.++.+.. .
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~ 85 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGAR-VHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERF-G 85 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHh-C
Confidence 357789999996 99999999999999995 8999998776655433 3222 222222222 22233333433222 4
Q ss_pred CccEEEEcCCC
Q 048013 168 GIDVSFDCAGF 178 (216)
Q Consensus 168 ~~d~vi~~~g~ 178 (216)
++|+||.++|.
T Consensus 86 ~~d~vi~~ag~ 96 (264)
T PRK12829 86 GLDVLVNNAGI 96 (264)
T ss_pred CCCEEEECCCC
Confidence 79999998885
No 208
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=97.60 E-value=0.0023 Score=48.23 Aligned_cols=103 Identities=18% Similarity=0.314 Sum_probs=60.4
Q ss_pred cCCCCCCEEEEEcCCHHHHHHHHHHHHc-CCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCc
Q 048013 91 ANIGPETNVLIMGSGPIGLVTMLAARAF-GAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 169 (216)
Q Consensus 91 ~~~~~~~~vlv~Gag~~G~~~i~~a~~~-g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (216)
..++++++||.+|+|+-+ .+..+++.. +..+++++|.++.. ...+.. .+..+..+.+..+.+.+. ..+.++
T Consensus 28 ~~i~~g~~VLDiG~GtG~-~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~-~~~~d~~~~~~~~~l~~~--~~~~~~ 99 (188)
T TIGR00438 28 KLIKPGDTVLDLGAAPGG-WSQVAVEQVGGKGRVIAVDLQPMK----PIENVD-FIRGDFTDEEVLNKIRER--VGDDKV 99 (188)
T ss_pred cccCCCCEEEEecCCCCH-HHHHHHHHhCCCceEEEEeccccc----cCCCce-EEEeeCCChhHHHHHHHH--hCCCCc
Confidence 557899999999987634 444455544 33369999998754 111222 221111111222222222 235579
Q ss_pred cEEEEcC-----CC------------HHHHHHHHHHhhcCCEEEEeccC
Q 048013 170 DVSFDCA-----GF------------NKTMSTALSATRAGGKVCLVGMG 201 (216)
Q Consensus 170 d~vi~~~-----g~------------~~~~~~~~~~l~~~G~~v~~g~~ 201 (216)
|+|+... |. ...+..+.+.|+|+|++++....
T Consensus 100 D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~~~ 148 (188)
T TIGR00438 100 DVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKVFQ 148 (188)
T ss_pred cEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEEcc
Confidence 9999632 21 24667889999999999986543
No 209
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=97.59 E-value=0.00043 Score=55.42 Aligned_cols=98 Identities=18% Similarity=0.288 Sum_probs=71.3
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEEcC
Q 048013 97 TNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 176 (216)
Q Consensus 97 ~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 176 (216)
..|.|+|.|-+|.-+++.|.-+|+. |.+.|.|.++++.++.+-...+..+.....++++.+ .+.|++|.++
T Consensus 169 ~kv~iiGGGvvgtnaAkiA~glgA~-Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v--------~~aDlvIgaV 239 (371)
T COG0686 169 AKVVVLGGGVVGTNAAKIAIGLGAD-VTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAV--------KKADLVIGAV 239 (371)
T ss_pred ccEEEECCccccchHHHHHhccCCe-eEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHh--------hhccEEEEEE
Confidence 4577789999999999999999996 999999999999887644333333223333333322 3588988864
Q ss_pred CC------HHHHHHHHHHhhcCCEEEEeccCCC
Q 048013 177 GF------NKTMSTALSATRAGGKVCLVGMGHR 203 (216)
Q Consensus 177 g~------~~~~~~~~~~l~~~G~~v~~g~~~~ 203 (216)
=- .-..++.++.|+|++.++.+....+
T Consensus 240 LIpgakaPkLvt~e~vk~MkpGsVivDVAiDqG 272 (371)
T COG0686 240 LIPGAKAPKLVTREMVKQMKPGSVIVDVAIDQG 272 (371)
T ss_pred EecCCCCceehhHHHHHhcCCCcEEEEEEEcCC
Confidence 32 1356788999999999999987555
No 210
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=97.57 E-value=0.0011 Score=50.00 Aligned_cols=96 Identities=22% Similarity=0.276 Sum_probs=62.8
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHH----HcCCCEEEeCCCCcccHHHHHHHHHHHcCCC
Q 048013 93 IGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK----KLGADNIVKVSTNLQDIAEEVEKIQKAMGTG 168 (216)
Q Consensus 93 ~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (216)
++++.+||.+|+|. |..++.+++.....+|+.+|.+++..+.++ +.+.+.+..+. .+. .++. ....
T Consensus 43 l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~---~d~----~~~~--~~~~ 112 (187)
T PRK00107 43 LPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVVH---GRA----EEFG--QEEK 112 (187)
T ss_pred cCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEe---ccH----hhCC--CCCC
Confidence 45689999999864 666666666543336999999988766553 35554332221 122 1221 1457
Q ss_pred ccEEEEcCCC--HHHHHHHHHHhhcCCEEEEe
Q 048013 169 IDVSFDCAGF--NKTMSTALSATRAGGKVCLV 198 (216)
Q Consensus 169 ~d~vi~~~g~--~~~~~~~~~~l~~~G~~v~~ 198 (216)
+|+|+..... ++.++.+.+.|+|+|+++.+
T Consensus 113 fDlV~~~~~~~~~~~l~~~~~~LkpGG~lv~~ 144 (187)
T PRK00107 113 FDVVTSRAVASLSDLVELCLPLLKPGGRFLAL 144 (187)
T ss_pred ccEEEEccccCHHHHHHHHHHhcCCCeEEEEE
Confidence 9999975433 36678899999999999877
No 211
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.57 E-value=0.0051 Score=48.04 Aligned_cols=82 Identities=17% Similarity=0.170 Sum_probs=52.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HHcC--CC-EEEeCCC-CcccHHHHHHHHHHHcCCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KKLG--AD-NIVKVST-NLQDIAEEVEKIQKAMGTG 168 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~~g--~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~ 168 (216)
+++++||+|+ |++|..+++.+...|++ |++++++.++.+.+ ..+. .. ..+..+- +.+++.+.+.++... ..+
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~ 81 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGAR-VVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALER-FGS 81 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-hCC
Confidence 4678999996 99999999999889996 99999998765544 3332 11 1222221 222333333433222 346
Q ss_pred ccEEEEcCCC
Q 048013 169 IDVSFDCAGF 178 (216)
Q Consensus 169 ~d~vi~~~g~ 178 (216)
+|++|.++|.
T Consensus 82 ~d~vi~~ag~ 91 (251)
T PRK07231 82 VDILVNNAGT 91 (251)
T ss_pred CCEEEECCCC
Confidence 9999999874
No 212
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=97.56 E-value=0.0021 Score=56.28 Aligned_cols=47 Identities=15% Similarity=0.156 Sum_probs=38.8
Q ss_pred HHcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH
Q 048013 89 RRANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA 136 (216)
Q Consensus 89 ~~~~~~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~ 136 (216)
+..+.+.++++||.|+ |.+|..+++.+...|++ |++++++.++.+.+
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~-Vval~Rn~ekl~~l 120 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGFR-VRAGVRSAQRAESL 120 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHHCCCe-EEEEeCCHHHHHHH
Confidence 3456778999999996 99999999999989995 88888988876543
No 213
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=97.55 E-value=0.00076 Score=57.12 Aligned_cols=97 Identities=12% Similarity=0.151 Sum_probs=63.2
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHH-HHHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccE
Q 048013 93 IGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLS-VAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 171 (216)
Q Consensus 93 ~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 171 (216)
...+++++|+|+|++|.+++..+...|+..++++.|+.++.+ ++++++....+. +. .+.+. -..+|+
T Consensus 178 ~l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~-------~~-~l~~~----l~~aDi 245 (414)
T PRK13940 178 NISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHY-------LS-ELPQL----IKKADI 245 (414)
T ss_pred CccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEec-------HH-HHHHH----hccCCE
Confidence 346789999999999999999999999878999999987755 445565222222 11 12221 135999
Q ss_pred EEEcCCCHHHHHHHHHHhhcCC-EEEEeccCC
Q 048013 172 SFDCAGFNKTMSTALSATRAGG-KVCLVGMGH 202 (216)
Q Consensus 172 vi~~~g~~~~~~~~~~~l~~~G-~~v~~g~~~ 202 (216)
||+|++.+...-. ...++... .++.++.|.
T Consensus 246 VI~aT~a~~~vi~-~~~~~~~~~~~iDLavPR 276 (414)
T PRK13940 246 IIAAVNVLEYIVT-CKYVGDKPRVFIDISIPQ 276 (414)
T ss_pred EEECcCCCCeeEC-HHHhCCCCeEEEEeCCCC
Confidence 9999998654311 11122111 467777654
No 214
>PRK06398 aldose dehydrogenase; Validated
Probab=97.55 E-value=0.0019 Score=51.10 Aligned_cols=100 Identities=13% Similarity=0.253 Sum_probs=62.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCC-CCcccHHHHHHHHHHHcCCCccEE
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVS 172 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~v 172 (216)
.++++||+|+ +++|..+++.+...|++ |+.++++++... .. ..+..+ .+.++..+.+.++.+.. .++|++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~~-Vi~~~r~~~~~~-----~~-~~~~~D~~~~~~i~~~~~~~~~~~-~~id~l 76 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSN-VINFDIKEPSYN-----DV-DYFKVDVSNKEQVIKGIDYVISKY-GRIDIL 76 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCe-EEEEeCCccccC-----ce-EEEEccCCCHHHHHHHHHHHHHHc-CCCCEE
Confidence 4689999996 89999999999999995 888888764321 11 112111 12233444444443332 469999
Q ss_pred EEcCCCH----------H---------------HHHHHHHHh--hcCCEEEEeccCC
Q 048013 173 FDCAGFN----------K---------------TMSTALSAT--RAGGKVCLVGMGH 202 (216)
Q Consensus 173 i~~~g~~----------~---------------~~~~~~~~l--~~~G~~v~~g~~~ 202 (216)
|+++|.. + ..+.+++.| ...|+++.++...
T Consensus 77 i~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~ 133 (258)
T PRK06398 77 VNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQ 133 (258)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcch
Confidence 9998741 0 234455555 3458899887543
No 215
>PRK06180 short chain dehydrogenase; Provisional
Probab=97.55 E-value=0.0043 Score=49.53 Aligned_cols=82 Identities=21% Similarity=0.141 Sum_probs=53.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHc-CCC-EEEeCCC-CcccHHHHHHHHHHHcCCCcc
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKL-GAD-NIVKVST-NLQDIAEEVEKIQKAMGTGID 170 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~-g~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~d 170 (216)
.++++||+|+ |++|..+++.+...|++ |++++++.++.+.+.+. +.. ..+..+- +.+...+.+.++.+. -.++|
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~-V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~-~~~~d 80 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHR-VVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEAT-FGPID 80 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCE-EEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHH-hCCCC
Confidence 3578999996 99999999999889985 99999988877655443 221 1222222 122233333433322 24699
Q ss_pred EEEEcCCC
Q 048013 171 VSFDCAGF 178 (216)
Q Consensus 171 ~vi~~~g~ 178 (216)
+++.++|.
T Consensus 81 ~vv~~ag~ 88 (277)
T PRK06180 81 VLVNNAGY 88 (277)
T ss_pred EEEECCCc
Confidence 99999885
No 216
>PRK07062 short chain dehydrogenase; Provisional
Probab=97.54 E-value=0.0055 Score=48.48 Aligned_cols=82 Identities=22% Similarity=0.357 Sum_probs=52.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHH-H----cCCCEE--EeCCC-CcccHHHHHHHHHHHc
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-K----LGADNI--VKVST-NLQDIAEEVEKIQKAM 165 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~-~----~g~~~~--~~~~~-~~~~~~~~~~~~~~~~ 165 (216)
.+++++|.|+ +++|..+++.+...|++ |+.+++++++.+... + .+...+ +..+- +.++..+.+.++.+..
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGAS-VAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARF 85 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 4689999996 89999999999999995 888989887655432 2 222122 11111 2223333344443333
Q ss_pred CCCccEEEEcCCC
Q 048013 166 GTGIDVSFDCAGF 178 (216)
Q Consensus 166 ~~~~d~vi~~~g~ 178 (216)
.++|++|+++|.
T Consensus 86 -g~id~li~~Ag~ 97 (265)
T PRK07062 86 -GGVDMLVNNAGQ 97 (265)
T ss_pred -CCCCEEEECCCC
Confidence 469999999984
No 217
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.54 E-value=0.004 Score=49.74 Aligned_cols=107 Identities=21% Similarity=0.216 Sum_probs=65.2
Q ss_pred CCCCEEEEEcC---CHHHHHHHHHHHHcCCCeEEEEcCCh---HHHHHH-HHcCCCEEEeCCC-CcccHHHHHHHHHHHc
Q 048013 94 GPETNVLIMGS---GPIGLVTMLAARAFGAPRIVIVDVDD---YRLSVA-KKLGADNIVKVST-NLQDIAEEVEKIQKAM 165 (216)
Q Consensus 94 ~~~~~vlv~Ga---g~~G~~~i~~a~~~g~~~vv~~~~~~---~~~~~~-~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~ 165 (216)
-.++++||.|+ +++|.++++.+...|++ |+.+.+++ ++.+.+ ++++....+..|- +.++..+.+.++.+..
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~-V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 86 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGAE-LAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW 86 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCCE-EEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence 35688999986 58999999999999995 77776653 233322 3445322222222 2233344444443333
Q ss_pred CCCccEEEEcCCCH--------------H---------------HHHHHHHHhhcCCEEEEeccCC
Q 048013 166 GTGIDVSFDCAGFN--------------K---------------TMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 166 ~~~~d~vi~~~g~~--------------~---------------~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
.++|++++++|.. + ..+.+++.++.+|+++.++...
T Consensus 87 -g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~ 151 (272)
T PRK08159 87 -GKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYG 151 (272)
T ss_pred -CCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccc
Confidence 4799999998731 0 2344556666679998887543
No 218
>PRK08589 short chain dehydrogenase; Validated
Probab=97.54 E-value=0.0048 Score=49.15 Aligned_cols=82 Identities=23% Similarity=0.375 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHc---CCC-EEEeCC-CCcccHHHHHHHHHHHcCCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKL---GAD-NIVKVS-TNLQDIAEEVEKIQKAMGTG 168 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~---g~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~ 168 (216)
+++++||.|+ +++|..+++.+...|++ |++++++++..+.++++ +.. ..+..+ .+.++..+.+.++.+.. ++
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~-vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g~ 82 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAY-VLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQF-GR 82 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHc-CC
Confidence 5789999996 89999999998889995 88888884333333333 322 122222 12233334444444333 46
Q ss_pred ccEEEEcCCC
Q 048013 169 IDVSFDCAGF 178 (216)
Q Consensus 169 ~d~vi~~~g~ 178 (216)
+|++|+++|.
T Consensus 83 id~li~~Ag~ 92 (272)
T PRK08589 83 VDVLFNNAGV 92 (272)
T ss_pred cCEEEECCCC
Confidence 9999999874
No 219
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=97.54 E-value=0.0027 Score=49.63 Aligned_cols=107 Identities=22% Similarity=0.380 Sum_probs=75.6
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHH----cCCCEEEeCCCCcccHHHHHHHHHHH
Q 048013 89 RRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKK----LGADNIVKVSTNLQDIAEEVEKIQKA 164 (216)
Q Consensus 89 ~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~ 164 (216)
...+..+|++||-.|+|. |-.++.+++..|-..|+++|.+++-++.+++ .+...+.-+. .|+ .++. -
T Consensus 45 ~~~~~~~g~~vLDva~GT-Gd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~---~dA----e~LP-f 115 (238)
T COG2226 45 SLLGIKPGDKVLDVACGT-GDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVV---GDA----ENLP-F 115 (238)
T ss_pred HhhCCCCCCEEEEecCCc-cHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEE---ech----hhCC-C
Confidence 445666899999998774 8899999999875579999999987776643 3333211111 121 1221 2
Q ss_pred cCCCccEEEEcCCC------HHHHHHHHHHhhcCCEEEEeccCCCC
Q 048013 165 MGTGIDVSFDCAGF------NKTMSTALSATRAGGKVCLVGMGHRE 204 (216)
Q Consensus 165 ~~~~~d~vi~~~g~------~~~~~~~~~~l~~~G~~v~~g~~~~~ 204 (216)
.+.-||++.-+.|- +..++++.|.|+|+|+++.+.+..+.
T Consensus 116 ~D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~p~ 161 (238)
T COG2226 116 PDNSFDAVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSKPD 161 (238)
T ss_pred CCCccCEEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCCCC
Confidence 35678998887773 45789999999999999999887664
No 220
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=97.53 E-value=0.0031 Score=48.23 Aligned_cols=35 Identities=40% Similarity=0.550 Sum_probs=31.5
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 048013 95 PETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVD 129 (216)
Q Consensus 95 ~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~ 129 (216)
.+.+|+|+|+|++|..+++.+...|..++..+|.+
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 45789999999999999999999999889999877
No 221
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=97.52 E-value=0.0037 Score=49.17 Aligned_cols=82 Identities=20% Similarity=0.285 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH----HHcCCCE-EEeCCC-CcccHHHHHHHHHHHcCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KKLGADN-IVKVST-NLQDIAEEVEKIQKAMGT 167 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~----~~~g~~~-~~~~~~-~~~~~~~~~~~~~~~~~~ 167 (216)
.++++||+|+ |++|..+++.+...|++ |+.+++++++.+.+ +..+... .+..+- +.++..+.+.++.+ ...
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~ 86 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAE-VILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEA-EIG 86 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHH-hcC
Confidence 5789999996 99999999999889995 88888887765433 2223222 121121 22233333443332 235
Q ss_pred CccEEEEcCCC
Q 048013 168 GIDVSFDCAGF 178 (216)
Q Consensus 168 ~~d~vi~~~g~ 178 (216)
++|++|.++|.
T Consensus 87 ~~d~li~~ag~ 97 (255)
T PRK07523 87 PIDILVNNAGM 97 (255)
T ss_pred CCCEEEECCCC
Confidence 79999999984
No 222
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.52 E-value=0.0049 Score=49.01 Aligned_cols=81 Identities=17% Similarity=0.205 Sum_probs=49.5
Q ss_pred CCCEEEEEcCC---HHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHH----cCCCEEEeCCC-CcccHHHHHHHHHHHcC
Q 048013 95 PETNVLIMGSG---PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKK----LGADNIVKVST-NLQDIAEEVEKIQKAMG 166 (216)
Q Consensus 95 ~~~~vlv~Gag---~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~----~g~~~~~~~~~-~~~~~~~~~~~~~~~~~ 166 (216)
++++++|+|++ ++|.++++.+...|++ |+.+++++...+.+++ .+....+..|- +.++..+.+.++.+..
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~-vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~- 82 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAE-LAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVW- 82 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCE-EEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhc-
Confidence 56889999963 8999999999889995 7777776422222322 22222222222 2233444444444323
Q ss_pred CCccEEEEcCC
Q 048013 167 TGIDVSFDCAG 177 (216)
Q Consensus 167 ~~~d~vi~~~g 177 (216)
..+|++|+++|
T Consensus 83 g~iD~linnAg 93 (262)
T PRK07984 83 PKFDGFVHSIG 93 (262)
T ss_pred CCCCEEEECCc
Confidence 46999999997
No 223
>PRK07806 short chain dehydrogenase; Provisional
Probab=97.52 E-value=0.0045 Score=48.37 Aligned_cols=104 Identities=22% Similarity=0.229 Sum_probs=61.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChH-HHHH----HHHcCCCE-EEeCCC-CcccHHHHHHHHHHHcC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDY-RLSV----AKKLGADN-IVKVST-NLQDIAEEVEKIQKAMG 166 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~-~~~~----~~~~g~~~-~~~~~~-~~~~~~~~~~~~~~~~~ 166 (216)
.+++++|.|+ |++|..+++.+...|++ |++++++.+ +.+. ++..+... .+..+- +.++..+.+.++.+. .
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~-V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~ 82 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAH-VVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREE-F 82 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCE-EEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh-C
Confidence 4678999996 89999999998889985 777777643 3322 22223221 122121 222333334443322 2
Q ss_pred CCccEEEEcCCCH-------------------HHHHHHHHHhhcCCEEEEecc
Q 048013 167 TGIDVSFDCAGFN-------------------KTMSTALSATRAGGKVCLVGM 200 (216)
Q Consensus 167 ~~~d~vi~~~g~~-------------------~~~~~~~~~l~~~G~~v~~g~ 200 (216)
.++|+++.+++.. ..++.+.+.+..+|+++.++.
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS 135 (248)
T PRK07806 83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS 135 (248)
T ss_pred CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence 4699999888641 233555555556788888864
No 224
>PRK06057 short chain dehydrogenase; Provisional
Probab=97.51 E-value=0.0015 Score=51.38 Aligned_cols=81 Identities=23% Similarity=0.314 Sum_probs=53.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HHcCCCEEEeCCC-CcccHHHHHHHHHHHcCCCccE
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KKLGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDV 171 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~ 171 (216)
++++++|+|+ |++|..+++.+...|++ |+++++++.+.+.. ++++... +..+- +.+...+.+.++.+. ..++|+
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~-~~~D~~~~~~~~~~~~~~~~~-~~~id~ 82 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGAT-VVVGDIDPEAGKAAADEVGGLF-VPTDVTDEDAVNALFDTAAET-YGSVDI 82 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHcCCcE-EEeeCCCHHHHHHHHHHHHHH-cCCCCE
Confidence 5789999996 99999999999999995 88888887765543 4454432 22222 222333344444322 246999
Q ss_pred EEEcCCC
Q 048013 172 SFDCAGF 178 (216)
Q Consensus 172 vi~~~g~ 178 (216)
+|.++|.
T Consensus 83 vi~~ag~ 89 (255)
T PRK06057 83 AFNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9998874
No 225
>PRK07402 precorrin-6B methylase; Provisional
Probab=97.50 E-value=0.0055 Score=46.48 Aligned_cols=104 Identities=13% Similarity=0.303 Sum_probs=63.2
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHH----cCCCEEEeCCCCcccHHHHHHHHHHH
Q 048013 89 RRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKK----LGADNIVKVSTNLQDIAEEVEKIQKA 164 (216)
Q Consensus 89 ~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~ 164 (216)
....++++++||-+|+|. |..++.+++......|+++|.+++..+.+++ ++...+..+. .+..+.+..+
T Consensus 34 ~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~---~d~~~~~~~~--- 106 (196)
T PRK07402 34 SQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIE---GSAPECLAQL--- 106 (196)
T ss_pred HhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEE---CchHHHHhhC---
Confidence 555678889999998764 5566666665432369999999887766643 5554332221 2222222221
Q ss_pred cCCCccE-EEEcCCC-HHHHHHHHHHhhcCCEEEEecc
Q 048013 165 MGTGIDV-SFDCAGF-NKTMSTALSATRAGGKVCLVGM 200 (216)
Q Consensus 165 ~~~~~d~-vi~~~g~-~~~~~~~~~~l~~~G~~v~~g~ 200 (216)
...+|. .++.... ...++.+.+.|+|+|+++..-.
T Consensus 107 -~~~~d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 143 (196)
T PRK07402 107 -APAPDRVCIEGGRPIKEILQAVWQYLKPGGRLVATAS 143 (196)
T ss_pred -CCCCCEEEEECCcCHHHHHHHHHHhcCCCeEEEEEee
Confidence 122344 4443222 3667889999999999987753
No 226
>PRK08618 ornithine cyclodeaminase; Validated
Probab=97.49 E-value=0.0035 Score=51.55 Aligned_cols=100 Identities=10% Similarity=0.091 Sum_probs=67.9
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHH-HHcCCCeEEEEcCChHHHHHH-HHc----CCCEEEeCCCCcccHHHHHHHHH
Q 048013 89 RRANIGPETNVLIMGSGPIGLVTMLAA-RAFGAPRIVIVDVDDYRLSVA-KKL----GADNIVKVSTNLQDIAEEVEKIQ 162 (216)
Q Consensus 89 ~~~~~~~~~~vlv~Gag~~G~~~i~~a-~~~g~~~vv~~~~~~~~~~~~-~~~----g~~~~~~~~~~~~~~~~~~~~~~ 162 (216)
+....+..++++|+|+|..|...+..+ ...+++.|.+++++.++.+.+ +++ +... ..+ .+..+.+
T Consensus 120 ~~la~~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~-~~~----~~~~~~~---- 190 (325)
T PRK08618 120 KYLAREDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEI-YVV----NSADEAI---- 190 (325)
T ss_pred HHhcCCCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcE-EEe----CCHHHHH----
Confidence 444455678899999999998777654 456888899999998886543 333 3332 122 1222222
Q ss_pred HHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCC
Q 048013 163 KAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHR 203 (216)
Q Consensus 163 ~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 203 (216)
...|+|+.+++..... .. ..++++-.+..+|...+
T Consensus 191 ----~~aDiVi~aT~s~~p~-i~-~~l~~G~hV~~iGs~~p 225 (325)
T PRK08618 191 ----EEADIIVTVTNAKTPV-FS-EKLKKGVHINAVGSFMP 225 (325)
T ss_pred ----hcCCEEEEccCCCCcc-hH-HhcCCCcEEEecCCCCc
Confidence 3689999999985443 33 88899999999996544
No 227
>PRK09242 tropinone reductase; Provisional
Probab=97.49 E-value=0.0088 Score=47.08 Aligned_cols=82 Identities=22% Similarity=0.282 Sum_probs=52.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHH-Hc-----CCCE-EEeCCC-CcccHHHHHHHHHHHc
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-KL-----GADN-IVKVST-NLQDIAEEVEKIQKAM 165 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~-~~-----g~~~-~~~~~~-~~~~~~~~~~~~~~~~ 165 (216)
.+++++|.|+ |++|..+++.+...|++ |++++++.++.+.+. ++ +... .+..+- +.++..+.+.++.+..
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGAD-VLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHW 86 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4789999996 89999999999999995 888888887655432 22 2221 111121 1223333344443333
Q ss_pred CCCccEEEEcCCC
Q 048013 166 GTGIDVSFDCAGF 178 (216)
Q Consensus 166 ~~~~d~vi~~~g~ 178 (216)
.++|+++.+.|.
T Consensus 87 -g~id~li~~ag~ 98 (257)
T PRK09242 87 -DGLHILVNNAGG 98 (257)
T ss_pred -CCCCEEEECCCC
Confidence 479999999984
No 228
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=97.49 E-value=0.0083 Score=47.12 Aligned_cols=82 Identities=32% Similarity=0.467 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HHc---CCCE-EEeCCCC-cccHHHHHHHHHHHcCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KKL---GADN-IVKVSTN-LQDIAEEVEKIQKAMGT 167 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~~---g~~~-~~~~~~~-~~~~~~~~~~~~~~~~~ 167 (216)
.++++||+|+ |++|..+++.+...|++ ++.++++.++.+.+ +++ +... .+..+-. .++..+.+.++.+. ..
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~-vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~ 85 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAE-IIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKD-IG 85 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCE-EEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHh-cC
Confidence 5788999996 89999999999989985 88898887665433 222 3221 2222222 22333334443322 24
Q ss_pred CccEEEEcCCC
Q 048013 168 GIDVSFDCAGF 178 (216)
Q Consensus 168 ~~d~vi~~~g~ 178 (216)
++|+++.+.|.
T Consensus 86 ~id~vi~~ag~ 96 (254)
T PRK08085 86 PIDVLINNAGI 96 (254)
T ss_pred CCCEEEECCCc
Confidence 69999999984
No 229
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=97.48 E-value=0.0012 Score=47.92 Aligned_cols=105 Identities=25% Similarity=0.304 Sum_probs=66.9
Q ss_pred HHHHHcCC-CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHH-HHHcCCCEE-EeCCCCcccHHHHHHHHH
Q 048013 86 HACRRANI-GPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKKLGADNI-VKVSTNLQDIAEEVEKIQ 162 (216)
Q Consensus 86 ~~l~~~~~-~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~-~~~~g~~~~-~~~~~~~~~~~~~~~~~~ 162 (216)
++++..+. .++++++|+|+|.+|...++.+...|...+++++++.++.+. +++++.... ... .+. .+.
T Consensus 8 ~a~~~~~~~~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~----~~~----~~~- 78 (155)
T cd01065 8 RALEEAGIELKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAY----LDL----EEL- 78 (155)
T ss_pred HHHHhhCCCCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceee----cch----hhc-
Confidence 34444333 457889999999999999999888874468899999877654 455554310 011 111 111
Q ss_pred HHcCCCccEEEEcCCCHHH----HHHHHHHhhcCCEEEEeccCC
Q 048013 163 KAMGTGIDVSFDCAGFNKT----MSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 163 ~~~~~~~d~vi~~~g~~~~----~~~~~~~l~~~G~~v~~g~~~ 202 (216)
-.++|+++.+++.... .......++++..++.++..+
T Consensus 79 ---~~~~Dvvi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~~ 119 (155)
T cd01065 79 ---LAEADLIINTTPVGMKPGDELPLPPSLLKPGGVVYDVVYNP 119 (155)
T ss_pred ---cccCCEEEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcCC
Confidence 2469999999987332 112234467778888887654
No 230
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.48 E-value=0.0038 Score=49.38 Aligned_cols=107 Identities=16% Similarity=0.208 Sum_probs=64.2
Q ss_pred CCCEEEEEcC---CHHHHHHHHHHHHcCCCeEEEEcCCh---HHHHHH-HHcCCCE--EEeCC-CCcccHHHHHHHHHHH
Q 048013 95 PETNVLIMGS---GPIGLVTMLAARAFGAPRIVIVDVDD---YRLSVA-KKLGADN--IVKVS-TNLQDIAEEVEKIQKA 164 (216)
Q Consensus 95 ~~~~vlv~Ga---g~~G~~~i~~a~~~g~~~vv~~~~~~---~~~~~~-~~~g~~~--~~~~~-~~~~~~~~~~~~~~~~ 164 (216)
.+++++|+|+ +++|.++++.+...|++ |+.++++. ++.+.+ +++.... .+..| .+.++..+.++++.+.
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 84 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAK-LVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEE 84 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCE-EEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHh
Confidence 4689999985 59999999999889995 77776542 333333 3342111 12111 2223344444444333
Q ss_pred cCCCccEEEEcCCCH--------------H---------------HHHHHHHHhhcCCEEEEeccCCC
Q 048013 165 MGTGIDVSFDCAGFN--------------K---------------TMSTALSATRAGGKVCLVGMGHR 203 (216)
Q Consensus 165 ~~~~~d~vi~~~g~~--------------~---------------~~~~~~~~l~~~G~~v~~g~~~~ 203 (216)
. +++|++++++|.. + ..+.+++.|.++|+++.++....
T Consensus 85 ~-g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~ 151 (257)
T PRK08594 85 V-GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGG 151 (257)
T ss_pred C-CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCC
Confidence 2 4799999987621 0 12345566677899998885444
No 231
>PRK00811 spermidine synthase; Provisional
Probab=97.48 E-value=0.00092 Score=53.84 Aligned_cols=98 Identities=18% Similarity=0.187 Sum_probs=64.5
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCC--------C-EEEeCCCCcccHHHHHHHHHHH
Q 048013 94 GPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGA--------D-NIVKVSTNLQDIAEEVEKIQKA 164 (216)
Q Consensus 94 ~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~--------~-~~~~~~~~~~~~~~~~~~~~~~ 164 (216)
.++++||++|+|. |..+..+++..+..+|++++.+++-.+.++++-. + .+.. ...|..+.+.+
T Consensus 75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v---~~~Da~~~l~~---- 146 (283)
T PRK00811 75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVEL---VIGDGIKFVAE---- 146 (283)
T ss_pred CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEE---EECchHHHHhh----
Confidence 4568999999865 6666777776676679999999998888866311 1 1111 11233333322
Q ss_pred cCCCccEEEEcCCC----------HHHHHHHHHHhhcCCEEEEec
Q 048013 165 MGTGIDVSFDCAGF----------NKTMSTALSATRAGGKVCLVG 199 (216)
Q Consensus 165 ~~~~~d~vi~~~g~----------~~~~~~~~~~l~~~G~~v~~g 199 (216)
....+|+||..... .+.++.+.+.|+++|.++.-.
T Consensus 147 ~~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~~ 191 (283)
T PRK00811 147 TENSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQS 191 (283)
T ss_pred CCCcccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEeC
Confidence 35579998875422 244577889999999998653
No 232
>PRK07832 short chain dehydrogenase; Provisional
Probab=97.48 E-value=0.0063 Score=48.43 Aligned_cols=79 Identities=25% Similarity=0.392 Sum_probs=49.8
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH----HHcCCCEE----EeCCCCcccHHHHHHHHHHHcCC
Q 048013 97 TNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KKLGADNI----VKVSTNLQDIAEEVEKIQKAMGT 167 (216)
Q Consensus 97 ~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~----~~~g~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 167 (216)
++++|+|+ |++|..+++.+...|++ |+.+++++++.+.. +..+.... .++ .+.+...+.+.++.+. ..
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~-vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~~ 77 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAE-LFLTDRDADGLAQTVADARALGGTVPEHRALDI-SDYDAVAAFAADIHAA-HG 77 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeC-CCHHHHHHHHHHHHHh-cC
Confidence 36899986 89999999999889985 88888887665433 22333221 222 1222333333444322 34
Q ss_pred CccEEEEcCCC
Q 048013 168 GIDVSFDCAGF 178 (216)
Q Consensus 168 ~~d~vi~~~g~ 178 (216)
++|++|.++|.
T Consensus 78 ~id~lv~~ag~ 88 (272)
T PRK07832 78 SMDVVMNIAGI 88 (272)
T ss_pred CCCEEEECCCC
Confidence 69999999974
No 233
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=97.47 E-value=0.0019 Score=52.66 Aligned_cols=91 Identities=24% Similarity=0.289 Sum_probs=61.2
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEEc
Q 048013 97 TNVLIMGSGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 175 (216)
Q Consensus 97 ~~vlv~Gag~~G~~~i~~a~~~g~-~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 175 (216)
.+|.|+|+|.+|...+..++..|. ..|+++++++++.+.+++.|...... .+. .+. -...|+||.|
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~-----~~~----~~~----~~~aDvViia 73 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT-----TSA----AEA----VKGADLVILC 73 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec-----CCH----HHH----hcCCCEEEEC
Confidence 679999999999999999888885 35889999998888887777532111 111 111 1357888888
Q ss_pred CCCHH---HHHHHHHHhhcCCEEEEecc
Q 048013 176 AGFNK---TMSTALSATRAGGKVCLVGM 200 (216)
Q Consensus 176 ~g~~~---~~~~~~~~l~~~G~~v~~g~ 200 (216)
+.... .++.....++++..++.+|.
T Consensus 74 vp~~~~~~v~~~l~~~l~~~~iv~dvgs 101 (307)
T PRK07502 74 VPVGASGAVAAEIAPHLKPGAIVTDVGS 101 (307)
T ss_pred CCHHHHHHHHHHHHhhCCCCCEEEeCcc
Confidence 88632 22333345566666766664
No 234
>PRK06179 short chain dehydrogenase; Provisional
Probab=97.47 E-value=0.0034 Score=49.78 Aligned_cols=79 Identities=20% Similarity=0.248 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEE-EeCCCCcccHHHHHHHHHHHcCCCccEE
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNI-VKVSTNLQDIAEEVEKIQKAMGTGIDVS 172 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~v 172 (216)
.+++++|+|+ |++|..+++.+...|++ |++++++.++.+... +...+ .++ .+.+++.+.+.++.+. .+++|++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~-V~~~~r~~~~~~~~~--~~~~~~~D~-~d~~~~~~~~~~~~~~-~g~~d~l 77 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYR-VFGTSRNPARAAPIP--GVELLELDV-TDDASVQAAVDEVIAR-AGRIDVL 77 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCE-EEEEeCChhhccccC--CCeeEEeec-CCHHHHHHHHHHHHHh-CCCCCEE
Confidence 3568999996 99999999988889995 888888866543221 22221 122 2233444445554333 3469999
Q ss_pred EEcCCC
Q 048013 173 FDCAGF 178 (216)
Q Consensus 173 i~~~g~ 178 (216)
|.++|.
T Consensus 78 i~~ag~ 83 (270)
T PRK06179 78 VNNAGV 83 (270)
T ss_pred EECCCC
Confidence 999984
No 235
>PRK06101 short chain dehydrogenase; Provisional
Probab=97.46 E-value=0.0048 Score=48.15 Aligned_cols=41 Identities=24% Similarity=0.246 Sum_probs=34.0
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHH
Q 048013 97 TNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKK 138 (216)
Q Consensus 97 ~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~ 138 (216)
.+++|.|+ |++|..++..+...|++ |+++++++++.+.+.+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~ 43 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQ-VIACGRNQSVLDELHT 43 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCE-EEEEECCHHHHHHHHH
Confidence 56899986 99999988888889995 8999999887766644
No 236
>PRK08643 acetoin reductase; Validated
Probab=97.46 E-value=0.0075 Score=47.41 Aligned_cols=81 Identities=21% Similarity=0.277 Sum_probs=51.3
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HH---cCCCE-EEeCCC-CcccHHHHHHHHHHHcCCC
Q 048013 96 ETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KK---LGADN-IVKVST-NLQDIAEEVEKIQKAMGTG 168 (216)
Q Consensus 96 ~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~---~g~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~ 168 (216)
++++||+|+ |++|..+++.+...|++ |+.++++.++.+.+ .+ .+... .+..+- +.+...+.+.++.+. ..+
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~ 79 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFK-VAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDT-FGD 79 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-cCC
Confidence 568899986 89999999999999995 88888887665433 22 23222 122221 222333344444332 247
Q ss_pred ccEEEEcCCC
Q 048013 169 IDVSFDCAGF 178 (216)
Q Consensus 169 ~d~vi~~~g~ 178 (216)
+|++|.++|.
T Consensus 80 id~vi~~ag~ 89 (256)
T PRK08643 80 LNVVVNNAGV 89 (256)
T ss_pred CCEEEECCCC
Confidence 9999999874
No 237
>PRK07063 short chain dehydrogenase; Provisional
Probab=97.44 E-value=0.007 Score=47.73 Aligned_cols=82 Identities=26% Similarity=0.317 Sum_probs=52.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HHc-----CCCE-EEeCC-CCcccHHHHHHHHHHHc
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KKL-----GADN-IVKVS-TNLQDIAEEVEKIQKAM 165 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~~-----g~~~-~~~~~-~~~~~~~~~~~~~~~~~ 165 (216)
.+++++|.|+ |++|..+++.+...|++ |+.+++++++.+.+ +++ +... .+..+ .+.++..+.+.++.+..
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~-vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAA-VALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF 84 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 4688999996 89999999999999995 88888887765543 222 2211 12211 12233344444443333
Q ss_pred CCCccEEEEcCCC
Q 048013 166 GTGIDVSFDCAGF 178 (216)
Q Consensus 166 ~~~~d~vi~~~g~ 178 (216)
+++|++|.++|.
T Consensus 85 -g~id~li~~ag~ 96 (260)
T PRK07063 85 -GPLDVLVNNAGI 96 (260)
T ss_pred -CCCcEEEECCCc
Confidence 479999999883
No 238
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=97.44 E-value=0.0018 Score=51.27 Aligned_cols=81 Identities=25% Similarity=0.238 Sum_probs=53.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHH-cCCCE-EEeCC-CCcccHHHHHHHHHHHcCCCcc
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKK-LGADN-IVKVS-TNLQDIAEEVEKIQKAMGTGID 170 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~-~g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~d 170 (216)
++++++|+|+ |++|..+++.+...|++ |++++++.++.+.+.+ .+... .+..+ .+.++..+.++++.+.. +++|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id 81 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGAR-VAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAF-GKID 81 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHh-CCCC
Confidence 4689999996 89999999999999995 8888998877665544 33221 11111 12223334444443322 4689
Q ss_pred EEEEcCC
Q 048013 171 VSFDCAG 177 (216)
Q Consensus 171 ~vi~~~g 177 (216)
++|.+.|
T Consensus 82 ~li~~Ag 88 (262)
T TIGR03325 82 CLIPNAG 88 (262)
T ss_pred EEEECCC
Confidence 9999986
No 239
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=97.44 E-value=0.0043 Score=48.26 Aligned_cols=101 Identities=21% Similarity=0.246 Sum_probs=65.3
Q ss_pred HHHHHHcC-CCCCCEEEEEcCCHHHHHHHHHHHHcCCC--eEEEEcCC----hHH--------HHHHHHcCCCEEEeCCC
Q 048013 85 VHACRRAN-IGPETNVLIMGSGPIGLVTMLAARAFGAP--RIVIVDVD----DYR--------LSVAKKLGADNIVKVST 149 (216)
Q Consensus 85 ~~~l~~~~-~~~~~~vlv~Gag~~G~~~i~~a~~~g~~--~vv~~~~~----~~~--------~~~~~~~g~~~~~~~~~ 149 (216)
..+++..+ --.+.+++|+|+|+.|..++..+...|++ ++++++++ .++ .++++.++... .
T Consensus 13 ~~al~~~g~~l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~---~-- 87 (226)
T cd05311 13 LNALKLVGKKIEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK---T-- 87 (226)
T ss_pred HHHHHHhCCCccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc---c--
Confidence 34554443 34668999999999999999999999998 89999998 333 23344443211 0
Q ss_pred CcccHHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEec
Q 048013 150 NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG 199 (216)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g 199 (216)
..++.+. + .++|++|++++..-..+..++.|.++..++.+.
T Consensus 88 -~~~l~~~---l-----~~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~ls 128 (226)
T cd05311 88 -GGTLKEA---L-----KGADVFIGVSRPGVVKKEMIKKMAKDPIVFALA 128 (226)
T ss_pred -cCCHHHH---H-----hcCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeC
Confidence 0122121 1 248999999974122256777787877776655
No 240
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=97.44 E-value=0.0069 Score=47.49 Aligned_cols=79 Identities=24% Similarity=0.292 Sum_probs=50.8
Q ss_pred EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHH-cCCCE-EEeCC-CCcccHHHHHHHHHHHcCCCccEEE
Q 048013 98 NVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKK-LGADN-IVKVS-TNLQDIAEEVEKIQKAMGTGIDVSF 173 (216)
Q Consensus 98 ~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~-~g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi 173 (216)
+++|+|+ |++|..+++.+...|++ |+++++++++.+.+.. ++... .+..+ .+.++..+.+.++.+. .+++|.++
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~-~~~id~vi 79 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHK-VIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAE-WRNIDVLV 79 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHH-cCCCCEEE
Confidence 6889996 99999999999999995 8899998877665533 44332 11111 1222333334443322 34799999
Q ss_pred EcCCC
Q 048013 174 DCAGF 178 (216)
Q Consensus 174 ~~~g~ 178 (216)
.++|.
T Consensus 80 ~~ag~ 84 (248)
T PRK10538 80 NNAGL 84 (248)
T ss_pred ECCCc
Confidence 98874
No 241
>PRK08862 short chain dehydrogenase; Provisional
Probab=97.43 E-value=0.0022 Score=49.88 Aligned_cols=82 Identities=16% Similarity=0.211 Sum_probs=54.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH----HHcCCCE-EEeCC-CCcccHHHHHHHHHHHcCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KKLGADN-IVKVS-TNLQDIAEEVEKIQKAMGT 167 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~----~~~g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 167 (216)
++++++|.|+ +++|.+++..+...|++ |+.+++++++.+.+ ++.+... .+..+ .+.++..+.+.++.+..+.
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~-V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGAT-LILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR 82 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCE-EEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4688999996 79999999988889995 88888888776543 2334332 12211 2223344444555444444
Q ss_pred CccEEEEcCC
Q 048013 168 GIDVSFDCAG 177 (216)
Q Consensus 168 ~~d~vi~~~g 177 (216)
.+|++|.++|
T Consensus 83 ~iD~li~nag 92 (227)
T PRK08862 83 APDVLVNNWT 92 (227)
T ss_pred CCCEEEECCc
Confidence 7999999986
No 242
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.43 E-value=0.0082 Score=47.24 Aligned_cols=82 Identities=23% Similarity=0.286 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHH--HHHHHHcCCCE-EEeCC-CCcccHHHHHHHHHHHcCCCc
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYR--LSVAKKLGADN-IVKVS-TNLQDIAEEVEKIQKAMGTGI 169 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~--~~~~~~~g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~ 169 (216)
+++++||+|+ +++|.++++.+...|++ |+.+++++.. .+.+++.+... .+..+ .+.++..+.+.++.+.. +++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~-vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g~i 84 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGAD-IVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVM-GHI 84 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHc-CCC
Confidence 5789999996 89999999999999995 7777765422 23344444332 12222 22233444444443333 469
Q ss_pred cEEEEcCCC
Q 048013 170 DVSFDCAGF 178 (216)
Q Consensus 170 d~vi~~~g~ 178 (216)
|+++.+.|.
T Consensus 85 D~lv~~ag~ 93 (251)
T PRK12481 85 DILINNAGI 93 (251)
T ss_pred CEEEECCCc
Confidence 999999874
No 243
>PRK01581 speE spermidine synthase; Validated
Probab=97.42 E-value=0.0053 Score=50.85 Aligned_cols=99 Identities=16% Similarity=0.152 Sum_probs=65.4
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcC-----------CCEEEeCCCCcccHHHHHHHH
Q 048013 93 IGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLG-----------ADNIVKVSTNLQDIAEEVEKI 161 (216)
Q Consensus 93 ~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g-----------~~~~~~~~~~~~~~~~~~~~~ 161 (216)
....++||++|+|. |..+..+++..+..+|++++.+++-.+.++++. ...+.. ...|..+.+.+
T Consensus 148 h~~PkrVLIIGgGd-G~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~v---vi~Da~~fL~~- 222 (374)
T PRK01581 148 VIDPKRVLILGGGD-GLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNV---HVCDAKEFLSS- 222 (374)
T ss_pred CCCCCEEEEECCCH-HHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEE---EECcHHHHHHh-
Confidence 45567999999763 666677777655567999999999888888631 111111 11233333332
Q ss_pred HHHcCCCccEEEEcCCC-----------HHHHHHHHHHhhcCCEEEEec
Q 048013 162 QKAMGTGIDVSFDCAGF-----------NKTMSTALSATRAGGKVCLVG 199 (216)
Q Consensus 162 ~~~~~~~~d~vi~~~g~-----------~~~~~~~~~~l~~~G~~v~~g 199 (216)
....||+||--... .+.++.+.+.|+|+|.++.-.
T Consensus 223 ---~~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs 268 (374)
T PRK01581 223 ---PSSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQS 268 (374)
T ss_pred ---cCCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 35579998876543 235678889999999987654
No 244
>PRK07060 short chain dehydrogenase; Provisional
Probab=97.42 E-value=0.0019 Score=50.29 Aligned_cols=78 Identities=21% Similarity=0.316 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEE
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 172 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 172 (216)
++++++|.|+ |++|..+++.+...|++ |++++++.++.+.+ ++.+... +..+-.+.+ .+.+..+. ..++|++
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~-~~~D~~~~~---~v~~~~~~-~~~~d~v 81 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGAR-VVAAARNAAALDRLAGETGCEP-LRLDVGDDA---AIRAALAA-AGAFDGL 81 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhCCeE-EEecCCCHH---HHHHHHHH-hCCCCEE
Confidence 5688999996 89999999999999985 88899988776554 3344432 222222221 23333222 2479999
Q ss_pred EEcCCC
Q 048013 173 FDCAGF 178 (216)
Q Consensus 173 i~~~g~ 178 (216)
|.+.|.
T Consensus 82 i~~ag~ 87 (245)
T PRK07060 82 VNCAGI 87 (245)
T ss_pred EECCCC
Confidence 999984
No 245
>PRK05884 short chain dehydrogenase; Provisional
Probab=97.41 E-value=0.0068 Score=46.87 Aligned_cols=98 Identities=23% Similarity=0.274 Sum_probs=61.4
Q ss_pred EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HHcCCCEEE-eCCCCcccHHHHHHHHHHHcCCCccEEEE
Q 048013 98 NVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KKLGADNIV-KVSTNLQDIAEEVEKIQKAMGTGIDVSFD 174 (216)
Q Consensus 98 ~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 174 (216)
+++|.|+ |++|..+++.+...|++ |+.+++++++.+.+ ++++...+. ++ .+.++..+.++++ ...+|++++
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~D~-~~~~~v~~~~~~~----~~~id~lv~ 75 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHK-VTLVGARRDDLEVAAKELDVDAIVCDN-TDPASLEEARGLF----PHHLDTIVN 75 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHhccCcEEecCC-CCHHHHHHHHHHH----hhcCcEEEE
Confidence 4789986 89999999999889995 88888988776644 445443321 22 1122222222222 236899998
Q ss_pred cCCC---------------HH---------------HHHHHHHHhhcCCEEEEeccC
Q 048013 175 CAGF---------------NK---------------TMSTALSATRAGGKVCLVGMG 201 (216)
Q Consensus 175 ~~g~---------------~~---------------~~~~~~~~l~~~G~~v~~g~~ 201 (216)
+.|. .+ ..+..++.|+.+|+++.++..
T Consensus 76 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~ 132 (223)
T PRK05884 76 VPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPE 132 (223)
T ss_pred CCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecC
Confidence 8651 01 224445556677999988743
No 246
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=97.41 E-value=0.0011 Score=53.31 Aligned_cols=75 Identities=13% Similarity=0.132 Sum_probs=51.5
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HHcCCCE-EEeCCCCcccHHHHHHHHHHHcCCCccEE
Q 048013 95 PETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KKLGADN-IVKVSTNLQDIAEEVEKIQKAMGTGIDVS 172 (216)
Q Consensus 95 ~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 172 (216)
.+++++|+|+|+++.+++..+..+|++++.++.|+.++.+.+ ++++... +..+. .. +.+.. .-..+|+|
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~----~~-~~~~~----~~~~~DiV 194 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE----GD-SGGLA----IEKAAEVL 194 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc----ch-hhhhh----cccCCCEE
Confidence 578999999999999999999999998899999998876544 4443221 11110 00 11111 11368999
Q ss_pred EEcCCC
Q 048013 173 FDCAGF 178 (216)
Q Consensus 173 i~~~g~ 178 (216)
|+|++.
T Consensus 195 InaTp~ 200 (282)
T TIGR01809 195 VSTVPA 200 (282)
T ss_pred EECCCC
Confidence 999885
No 247
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=97.41 E-value=0.0054 Score=48.33 Aligned_cols=80 Identities=25% Similarity=0.310 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHH---cCCCEE---EeCCCCcccHHHHHHHHHHHcCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKK---LGADNI---VKVSTNLQDIAEEVEKIQKAMGT 167 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~---~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 167 (216)
+++++||.|+ |++|..+++.+...|++ |+++++++...+..++ .+.... .++ .+.++..+.+.++.+. ..
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~~ 83 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGAR-VVLVDRSELVHEVAAELRAAGGEALALTADL-ETYAGAQAAMAAAVEA-FG 83 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCchHHHHHHHHHHhcCCeEEEEEEeC-CCHHHHHHHHHHHHHH-cC
Confidence 4688999996 89999999999889995 8888887543333333 333321 122 1222334444444332 24
Q ss_pred CccEEEEcCC
Q 048013 168 GIDVSFDCAG 177 (216)
Q Consensus 168 ~~d~vi~~~g 177 (216)
++|+++.++|
T Consensus 84 ~id~lv~nAg 93 (260)
T PRK12823 84 RIDVLINNVG 93 (260)
T ss_pred CCeEEEECCc
Confidence 7999999997
No 248
>PRK07856 short chain dehydrogenase; Provisional
Probab=97.40 E-value=0.0052 Score=48.29 Aligned_cols=78 Identities=23% Similarity=0.207 Sum_probs=49.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCC-EEEeCCC-CcccHHHHHHHHHHHcCCCccE
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGIDV 171 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~ 171 (216)
.++++||+|+ |++|..+++.+...|++ |+.++++.++ +..+.. ..+..+- +.++..+.+.++.+. ...+|+
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~-v~~~~r~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~ 78 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGAT-VVVCGRRAPE----TVDGRPAEFHAADVRDPDQVAALVDAIVER-HGRLDV 78 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCChhh----hhcCCceEEEEccCCCHHHHHHHHHHHHHH-cCCCCE
Confidence 4789999996 89999999999889995 8888887654 112221 1222221 222333444444332 246899
Q ss_pred EEEcCCC
Q 048013 172 SFDCAGF 178 (216)
Q Consensus 172 vi~~~g~ 178 (216)
+|.++|.
T Consensus 79 vi~~ag~ 85 (252)
T PRK07856 79 LVNNAGG 85 (252)
T ss_pred EEECCCC
Confidence 9999873
No 249
>PRK04457 spermidine synthase; Provisional
Probab=97.40 E-value=0.0035 Score=49.88 Aligned_cols=97 Identities=15% Similarity=0.113 Sum_probs=65.2
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHc-CCC----EEEeCCCCcccHHHHHHHHHHHcCCC
Q 048013 94 GPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKL-GAD----NIVKVSTNLQDIAEEVEKIQKAMGTG 168 (216)
Q Consensus 94 ~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~-g~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (216)
.++++||++|+|+ |.++..+++...-..+++++.+++-.+.+++. +.. .+.. ...|..+.+.+ ....
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v---~~~Da~~~l~~----~~~~ 136 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEV---IEADGAEYIAV----HRHS 136 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEE---EECCHHHHHHh----CCCC
Confidence 4567899999875 77777777776433699999999999888763 321 1111 11344444432 3457
Q ss_pred ccEEEEcC-CC---------HHHHHHHHHHhhcCCEEEEe
Q 048013 169 IDVSFDCA-GF---------NKTMSTALSATRAGGKVCLV 198 (216)
Q Consensus 169 ~d~vi~~~-g~---------~~~~~~~~~~l~~~G~~v~~ 198 (216)
+|+|+--. .. .+.++.+.+.|+|+|++++.
T Consensus 137 yD~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvin 176 (262)
T PRK04457 137 TDVILVDGFDGEGIIDALCTQPFFDDCRNALSSDGIFVVN 176 (262)
T ss_pred CCEEEEeCCCCCCCccccCcHHHHHHHHHhcCCCcEEEEE
Confidence 99987422 11 36778999999999999864
No 250
>PRK06949 short chain dehydrogenase; Provisional
Probab=97.39 E-value=0.0026 Score=50.05 Aligned_cols=83 Identities=19% Similarity=0.280 Sum_probs=54.2
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHH-c---CCC-EEEeCCC-CcccHHHHHHHHHHHcC
Q 048013 94 GPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKK-L---GAD-NIVKVST-NLQDIAEEVEKIQKAMG 166 (216)
Q Consensus 94 ~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~-~---g~~-~~~~~~~-~~~~~~~~~~~~~~~~~ 166 (216)
..+++++|+|+ |++|..+++.+...|++ |++++++.++.+.+.. + +.. ..+..+- +.++..+.++++.+ ..
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~-Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~ 84 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAK-VVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAET-EA 84 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH-hc
Confidence 35789999996 99999999999999995 8999898877654422 1 221 2222221 22334444444432 23
Q ss_pred CCccEEEEcCCC
Q 048013 167 TGIDVSFDCAGF 178 (216)
Q Consensus 167 ~~~d~vi~~~g~ 178 (216)
.++|++|.+.|.
T Consensus 85 ~~~d~li~~ag~ 96 (258)
T PRK06949 85 GTIDILVNNSGV 96 (258)
T ss_pred CCCCEEEECCCC
Confidence 579999999983
No 251
>PRK05876 short chain dehydrogenase; Provisional
Probab=97.39 E-value=0.0065 Score=48.61 Aligned_cols=82 Identities=28% Similarity=0.331 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HH---cCCCE-EEeCCC-CcccHHHHHHHHHHHcCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KK---LGADN-IVKVST-NLQDIAEEVEKIQKAMGT 167 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~---~g~~~-~~~~~~-~~~~~~~~~~~~~~~~~~ 167 (216)
.++++||+|+ |++|..+++.+...|++ |++++++.++.+.+ ++ .+... .+..+- +.++..+.+.++.+. ..
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~-Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g 82 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGAR-VVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRL-LG 82 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHH-cC
Confidence 5688999986 89999999999999995 88888887665533 22 23322 122221 222333334443332 24
Q ss_pred CccEEEEcCCC
Q 048013 168 GIDVSFDCAGF 178 (216)
Q Consensus 168 ~~d~vi~~~g~ 178 (216)
++|++|++.|.
T Consensus 83 ~id~li~nAg~ 93 (275)
T PRK05876 83 HVDVVFSNAGI 93 (275)
T ss_pred CCCEEEECCCc
Confidence 69999999983
No 252
>PRK06198 short chain dehydrogenase; Provisional
Probab=97.39 E-value=0.012 Score=46.25 Aligned_cols=83 Identities=22% Similarity=0.300 Sum_probs=52.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHH----HHHcCCCEE-EeCCCC-cccHHHHHHHHHHHcCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV----AKKLGADNI-VKVSTN-LQDIAEEVEKIQKAMGT 167 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~----~~~~g~~~~-~~~~~~-~~~~~~~~~~~~~~~~~ 167 (216)
.+++++|.|+ |++|..+++.+...|++.|++++++.++.+. +++.+.... +..+-. .+.+.+.+..+.+.. +
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g 83 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAF-G 83 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh-C
Confidence 5688999996 8999999999999999658888888665442 223343321 222222 222333333332222 3
Q ss_pred CccEEEEcCCC
Q 048013 168 GIDVSFDCAGF 178 (216)
Q Consensus 168 ~~d~vi~~~g~ 178 (216)
++|++|.+.|.
T Consensus 84 ~id~li~~ag~ 94 (260)
T PRK06198 84 RLDALVNAAGL 94 (260)
T ss_pred CCCEEEECCCc
Confidence 69999999984
No 253
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.39 E-value=0.01 Score=46.37 Aligned_cols=82 Identities=17% Similarity=0.232 Sum_probs=49.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEE-cCChHHHHHH-HHcCCCE-EEeCCC-CcccHHHHHHHHHHHcCCCc
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIV-DVDDYRLSVA-KKLGADN-IVKVST-NLQDIAEEVEKIQKAMGTGI 169 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~-~~~~~~~~~~-~~~g~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~ 169 (216)
.++++||+|+ |++|..++..+...|++ |+.. .++.++.+.+ .+++... .+..+- +.++..+.+.++.+..+.++
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~~-vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~i 82 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGAR-VVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPI 82 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCe-EEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence 3578999996 89999999998889996 6554 4445544433 3344221 222221 22233344444443345559
Q ss_pred cEEEEcCC
Q 048013 170 DVSFDCAG 177 (216)
Q Consensus 170 d~vi~~~g 177 (216)
|++|.+.|
T Consensus 83 d~li~~ag 90 (253)
T PRK08642 83 TTVVNNAL 90 (253)
T ss_pred eEEEECCC
Confidence 99999876
No 254
>PRK09186 flagellin modification protein A; Provisional
Probab=97.39 E-value=0.0084 Score=47.03 Aligned_cols=81 Identities=23% Similarity=0.365 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HHc----CCCE--EEeCCC-CcccHHHHHHHHHHHc
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KKL----GADN--IVKVST-NLQDIAEEVEKIQKAM 165 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~~----g~~~--~~~~~~-~~~~~~~~~~~~~~~~ 165 (216)
.+++++|.|+ |++|..++..+...|++ |+.++++.++.+.+ +++ +... .+..+- +.+...+.+.++.+..
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 81 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGI-VIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY 81 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 4688999996 89999999999999995 88888887765433 222 2221 111111 2223334444443322
Q ss_pred CCCccEEEEcCC
Q 048013 166 GTGIDVSFDCAG 177 (216)
Q Consensus 166 ~~~~d~vi~~~g 177 (216)
.++|++|.+.+
T Consensus 82 -~~id~vi~~A~ 92 (256)
T PRK09186 82 -GKIDGAVNCAY 92 (256)
T ss_pred -CCccEEEECCc
Confidence 46999999985
No 255
>PRK05866 short chain dehydrogenase; Provisional
Probab=97.37 E-value=0.0032 Score=50.87 Aligned_cols=82 Identities=23% Similarity=0.352 Sum_probs=52.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHH----HcCCCE-EEeCCCC-cccHHHHHHHHHHHcCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK----KLGADN-IVKVSTN-LQDIAEEVEKIQKAMGT 167 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~----~~g~~~-~~~~~~~-~~~~~~~~~~~~~~~~~ 167 (216)
.+++++|+|+ |++|..+++.+...|++ |++++++.++.+.+. +.+... .+..+-. .++..+.+.++.+.. .
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~~-Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~-g 116 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGAT-VVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRI-G 116 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence 3578999996 99999999998888985 899999887755442 223321 2222222 223333344433222 4
Q ss_pred CccEEEEcCCC
Q 048013 168 GIDVSFDCAGF 178 (216)
Q Consensus 168 ~~d~vi~~~g~ 178 (216)
++|++|.++|.
T Consensus 117 ~id~li~~AG~ 127 (293)
T PRK05866 117 GVDILINNAGR 127 (293)
T ss_pred CCCEEEECCCC
Confidence 79999999874
No 256
>PRK06128 oxidoreductase; Provisional
Probab=97.36 E-value=0.011 Score=47.94 Aligned_cols=106 Identities=20% Similarity=0.232 Sum_probs=63.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChH--H----HHHHHHcCCCEE-EeCCC-CcccHHHHHHHHHHHc
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDY--R----LSVAKKLGADNI-VKVST-NLQDIAEEVEKIQKAM 165 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~--~----~~~~~~~g~~~~-~~~~~-~~~~~~~~~~~~~~~~ 165 (216)
.++++||+|+ |++|..+++.+...|++ |+++.++.+ . .+.++..+.... +..+- +.+...+.+.++.+..
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~-V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 132 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGAD-IALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKEL 132 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCE-EEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence 5689999996 89999999999989995 666654322 1 122333443322 21221 2223334444443333
Q ss_pred CCCccEEEEcCCCH--------------------------HHHHHHHHHhhcCCEEEEeccCC
Q 048013 166 GTGIDVSFDCAGFN--------------------------KTMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 166 ~~~~d~vi~~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
.++|++|.++|.. ..++.+++.|..+|+++.++...
T Consensus 133 -g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~ 194 (300)
T PRK06128 133 -GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQ 194 (300)
T ss_pred -CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCcc
Confidence 4699999998841 02345555666788999887543
No 257
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=97.35 E-value=0.0054 Score=46.98 Aligned_cols=92 Identities=16% Similarity=0.167 Sum_probs=61.0
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChH-HHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEE
Q 048013 95 PETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDY-RLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 173 (216)
Q Consensus 95 ~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 173 (216)
.+++|||+|+|.+|..-++.+...|++ |++++.+.. .++.+.+.+--..+. .++.. ..+ .++|+||
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga~-VtVvsp~~~~~l~~l~~~~~i~~~~-----~~~~~--~dl-----~~~~lVi 74 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGAQ-LRVIAEELESELTLLAEQGGITWLA-----RCFDA--DIL-----EGAFLVI 74 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCE-EEEEcCCCCHHHHHHHHcCCEEEEe-----CCCCH--HHh-----CCcEEEE
Confidence 468999999999999999999999996 777765432 233333333111111 11111 111 3699999
Q ss_pred EcCCCHHHHHHHHHHhhcCCEEEEec
Q 048013 174 DCAGFNKTMSTALSATRAGGKVCLVG 199 (216)
Q Consensus 174 ~~~g~~~~~~~~~~~l~~~G~~v~~g 199 (216)
-+++.++.-......++..|.++.+-
T Consensus 75 ~at~d~~ln~~i~~~a~~~~ilvn~~ 100 (205)
T TIGR01470 75 AATDDEELNRRVAHAARARGVPVNVV 100 (205)
T ss_pred ECCCCHHHHHHHHHHHHHcCCEEEEC
Confidence 99999767677777888888777554
No 258
>PRK07774 short chain dehydrogenase; Provisional
Probab=97.34 E-value=0.0027 Score=49.68 Aligned_cols=82 Identities=22% Similarity=0.305 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HHc---CCC-EEEeCCCCc-ccHHHHHHHHHHHcCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KKL---GAD-NIVKVSTNL-QDIAEEVEKIQKAMGT 167 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~~---g~~-~~~~~~~~~-~~~~~~~~~~~~~~~~ 167 (216)
.+++++|+|+ |.+|..+++.+...|++ |+.+++++++.+.+ +++ +.. ..+..+-.+ +...+.+.++.+.. .
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~-vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~ 82 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGAS-VVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAF-G 82 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh-C
Confidence 5678999996 99999999999889985 88898887654433 222 222 122222222 22333333443333 3
Q ss_pred CccEEEEcCCC
Q 048013 168 GIDVSFDCAGF 178 (216)
Q Consensus 168 ~~d~vi~~~g~ 178 (216)
++|++|.++|.
T Consensus 83 ~id~vi~~ag~ 93 (250)
T PRK07774 83 GIDYLVNNAAI 93 (250)
T ss_pred CCCEEEECCCC
Confidence 69999999983
No 259
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.34 E-value=0.0082 Score=47.06 Aligned_cols=82 Identities=26% Similarity=0.354 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HH---cCCCE-EEeCCC-CcccHHHHHHHHHHHcCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KK---LGADN-IVKVST-NLQDIAEEVEKIQKAMGT 167 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~---~g~~~-~~~~~~-~~~~~~~~~~~~~~~~~~ 167 (216)
.+++++|+|+ |.+|..+++.+...|++ |++++++.++.+.+ .+ .+... .+..+- +.++..+.+.++.+. ..
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~ 80 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAK-VVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVET-FG 80 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence 4578999996 99999999988888995 88888887765443 22 23322 222222 222233333333322 34
Q ss_pred CccEEEEcCCC
Q 048013 168 GIDVSFDCAGF 178 (216)
Q Consensus 168 ~~d~vi~~~g~ 178 (216)
++|++|.+++.
T Consensus 81 ~~d~vi~~a~~ 91 (258)
T PRK12429 81 GVDILVNNAGI 91 (258)
T ss_pred CCCEEEECCCC
Confidence 79999998873
No 260
>PRK12747 short chain dehydrogenase; Provisional
Probab=97.34 E-value=0.01 Score=46.55 Aligned_cols=108 Identities=17% Similarity=0.201 Sum_probs=62.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEc-CChHHHHH-HH---HcCCCE-EEeCCC-CcccHHHHHHHHHH---
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVD-VDDYRLSV-AK---KLGADN-IVKVST-NLQDIAEEVEKIQK--- 163 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~-~~~~~~~~-~~---~~g~~~-~~~~~~-~~~~~~~~~~~~~~--- 163 (216)
.+++++|+|+ |++|.++++.+...|++ |++.. ++.++.+. .. ..+... .+..+- +.++....+.++.+
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGAL-VAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ 81 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCe-EEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence 4688999996 89999999999999996 66653 44444332 22 223221 111111 11222333333322
Q ss_pred -HcC-CCccEEEEcCCCH----------H---------------HHHHHHHHhhcCCEEEEeccCCC
Q 048013 164 -AMG-TGIDVSFDCAGFN----------K---------------TMSTALSATRAGGKVCLVGMGHR 203 (216)
Q Consensus 164 -~~~-~~~d~vi~~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~~~ 203 (216)
..+ .++|+++.++|.. + .++.+++.+...|+++.++....
T Consensus 82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~ 148 (252)
T PRK12747 82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT 148 (252)
T ss_pred hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccc
Confidence 112 3799999998831 0 22456666777799999886544
No 261
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=97.33 E-value=0.0037 Score=49.43 Aligned_cols=82 Identities=22% Similarity=0.289 Sum_probs=54.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHH-HcCCC-EEEeCC-CCcccHHHHHHHHHHHcCCCcc
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-KLGAD-NIVKVS-TNLQDIAEEVEKIQKAMGTGID 170 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~-~~g~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~d 170 (216)
+++++||+|+ +++|..+++.+...|++ |+.+++++++.+.+. +++.. ..+..+ .+.++..+.+.++.+.. ..+|
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id 82 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGAR-VAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAF-GKLD 82 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhc-CCCC
Confidence 5689999996 89999999999999995 888999887766553 34332 122211 12233344444444332 4699
Q ss_pred EEEEcCCC
Q 048013 171 VSFDCAGF 178 (216)
Q Consensus 171 ~vi~~~g~ 178 (216)
++|+++|.
T Consensus 83 ~li~~ag~ 90 (263)
T PRK06200 83 CFVGNAGI 90 (263)
T ss_pred EEEECCCC
Confidence 99999883
No 262
>PRK08263 short chain dehydrogenase; Provisional
Probab=97.31 E-value=0.011 Score=47.22 Aligned_cols=81 Identities=20% Similarity=0.222 Sum_probs=51.8
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHH-cCCCE-EEeCCC-CcccHHHHHHHHHHHcCCCccE
Q 048013 96 ETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKK-LGADN-IVKVST-NLQDIAEEVEKIQKAMGTGIDV 171 (216)
Q Consensus 96 ~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~-~g~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~d~ 171 (216)
+++++|+|+ |++|..+++.+...|++ |+.++++.++.+.+.+ ++... .+..+- +.++..+.+.++.+.. .++|+
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~d~ 80 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDR-VVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHF-GRLDI 80 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHc-CCCCE
Confidence 468999996 99999999988888985 8888898877655433 33221 222211 2223333344433222 47899
Q ss_pred EEEcCCC
Q 048013 172 SFDCAGF 178 (216)
Q Consensus 172 vi~~~g~ 178 (216)
+|.++|.
T Consensus 81 vi~~ag~ 87 (275)
T PRK08263 81 VVNNAGY 87 (275)
T ss_pred EEECCCC
Confidence 9999884
No 263
>PRK07904 short chain dehydrogenase; Provisional
Probab=97.30 E-value=0.0091 Score=47.11 Aligned_cols=83 Identities=20% Similarity=0.366 Sum_probs=50.9
Q ss_pred CCCCCEEEEEcC-CHHHHHHHHHHHHcC-CCeEEEEcCChHH-HHH----HHHcCCCE--EEeCCC-CcccHHHHHHHHH
Q 048013 93 IGPETNVLIMGS-GPIGLVTMLAARAFG-APRIVIVDVDDYR-LSV----AKKLGADN--IVKVST-NLQDIAEEVEKIQ 162 (216)
Q Consensus 93 ~~~~~~vlv~Ga-g~~G~~~i~~a~~~g-~~~vv~~~~~~~~-~~~----~~~~g~~~--~~~~~~-~~~~~~~~~~~~~ 162 (216)
+..+++++|.|+ |++|..+++.+...| + +|+++++++++ .+. +++.+... .+..+- +.++..+.++++.
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 83 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAF 83 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHH
Confidence 456789999996 899999998776664 7 48888887664 332 23333312 222222 2223334445443
Q ss_pred HHcCCCccEEEEcCCC
Q 048013 163 KAMGTGIDVSFDCAGF 178 (216)
Q Consensus 163 ~~~~~~~d~vi~~~g~ 178 (216)
+ .+++|+++.++|.
T Consensus 84 ~--~g~id~li~~ag~ 97 (253)
T PRK07904 84 A--GGDVDVAIVAFGL 97 (253)
T ss_pred h--cCCCCEEEEeeec
Confidence 2 2479999988765
No 264
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=97.30 E-value=0.013 Score=46.39 Aligned_cols=106 Identities=16% Similarity=0.197 Sum_probs=63.3
Q ss_pred CCCEEEEEcC---CHHHHHHHHHHHHcCCCeEEEEcCC------hHHHHHHHHcCC-CEEEeCCC-CcccHHHHHHHHHH
Q 048013 95 PETNVLIMGS---GPIGLVTMLAARAFGAPRIVIVDVD------DYRLSVAKKLGA-DNIVKVST-NLQDIAEEVEKIQK 163 (216)
Q Consensus 95 ~~~~vlv~Ga---g~~G~~~i~~a~~~g~~~vv~~~~~------~~~~~~~~~~g~-~~~~~~~~-~~~~~~~~~~~~~~ 163 (216)
.+++++|.|+ +++|.++++.+...|++ |+.+.++ ++..+.+.+.+. ...+..|- +.++..+.+.++.+
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 83 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAE-LGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ 83 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCE-EEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence 4688999995 48999999999889996 6666432 222333322221 11222221 22333444444443
Q ss_pred HcCCCccEEEEcCCCH-------H----------------------HHHHHHHHhhcCCEEEEeccCC
Q 048013 164 AMGTGIDVSFDCAGFN-------K----------------------TMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 164 ~~~~~~d~vi~~~g~~-------~----------------------~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
.. +++|++++++|.. . ..+.+++.|+.+|+++.++...
T Consensus 84 ~~-g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~ 150 (258)
T PRK07370 84 KW-GKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLG 150 (258)
T ss_pred Hc-CCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccc
Confidence 33 4799999998731 0 2355677777789998887543
No 265
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=97.29 E-value=0.022 Score=44.74 Aligned_cols=82 Identities=17% Similarity=0.270 Sum_probs=52.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH----HHcCCCE-EEeCC-CCcccHHHHHHHHHHHcCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KKLGADN-IVKVS-TNLQDIAEEVEKIQKAMGT 167 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~----~~~g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 167 (216)
++++++|.|+ |++|..+++.+...|++ |+.++++.++.+.+ ++.+... .+..+ .+.++..+.++++.... +
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~ 87 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGAH-VLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEH-G 87 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCe-EEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc-C
Confidence 5789999996 89999999988889995 89999987665433 2334321 22222 22233344444443222 4
Q ss_pred CccEEEEcCCC
Q 048013 168 GIDVSFDCAGF 178 (216)
Q Consensus 168 ~~d~vi~~~g~ 178 (216)
++|.+|.++|.
T Consensus 88 ~id~vi~~ag~ 98 (256)
T PRK06124 88 RLDILVNNVGA 98 (256)
T ss_pred CCCEEEECCCC
Confidence 68999999884
No 266
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.29 E-value=0.0089 Score=47.03 Aligned_cols=82 Identities=20% Similarity=0.327 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH----HHcCCCEE-EeCCCCc-ccHHHHHHHHHHHcCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KKLGADNI-VKVSTNL-QDIAEEVEKIQKAMGT 167 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~----~~~g~~~~-~~~~~~~-~~~~~~~~~~~~~~~~ 167 (216)
.++++||+|+ |.+|..+++.+...|++ |+++++++++.+.+ ++.+.... +..+-.+ ....+.+.++.+. -.
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~ 83 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAA-VAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAER-FG 83 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCe-EEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence 4689999996 99999999999999995 88888888655432 23343322 2222112 2233333333222 24
Q ss_pred CccEEEEcCCC
Q 048013 168 GIDVSFDCAGF 178 (216)
Q Consensus 168 ~~d~vi~~~g~ 178 (216)
++|++|.++|.
T Consensus 84 ~~d~vi~~ag~ 94 (262)
T PRK13394 84 SVDILVSNAGI 94 (262)
T ss_pred CCCEEEECCcc
Confidence 68999999874
No 267
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=97.29 E-value=0.0039 Score=50.06 Aligned_cols=102 Identities=17% Similarity=0.168 Sum_probs=63.2
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHc-CCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEEc
Q 048013 97 TNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKL-GADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 175 (216)
Q Consensus 97 ~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 175 (216)
++|||+|.|. |..+-.+++.....++++++.+++-.+.++++ +....-..+.+.+-..+...++.+....++|+||--
T Consensus 78 k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~~fDvIi~D 156 (282)
T COG0421 78 KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEEKFDVIIVD 156 (282)
T ss_pred CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCCcCCEEEEc
Confidence 6999997653 44555677777777899999999999988773 322211111111111111222222234489997653
Q ss_pred CC-C---------HHHHHHHHHHhhcCCEEEEec
Q 048013 176 AG-F---------NKTMSTALSATRAGGKVCLVG 199 (216)
Q Consensus 176 ~g-~---------~~~~~~~~~~l~~~G~~v~~g 199 (216)
+. . .+..+.+-++|+++|.++.-.
T Consensus 157 ~tdp~gp~~~Lft~eFy~~~~~~L~~~Gi~v~q~ 190 (282)
T COG0421 157 STDPVGPAEALFTEEFYEGCRRALKEDGIFVAQA 190 (282)
T ss_pred CCCCCCcccccCCHHHHHHHHHhcCCCcEEEEec
Confidence 33 2 356789999999999998773
No 268
>PRK08628 short chain dehydrogenase; Provisional
Probab=97.29 E-value=0.0032 Score=49.62 Aligned_cols=82 Identities=23% Similarity=0.230 Sum_probs=52.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHH---cCCCE-EEeCCC-CcccHHHHHHHHHHHcCCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKK---LGADN-IVKVST-NLQDIAEEVEKIQKAMGTG 168 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~---~g~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~ 168 (216)
+++++||+|+ |++|..+++.+...|++ ++++++++++.+..++ .+... .+..+- +.++..+.+.++.+.. .+
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~ 83 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGAI-PVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKF-GR 83 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCc-EEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc-CC
Confidence 4678999996 89999999998889996 7888888776544333 23321 222221 1222333344443322 47
Q ss_pred ccEEEEcCCC
Q 048013 169 IDVSFDCAGF 178 (216)
Q Consensus 169 ~d~vi~~~g~ 178 (216)
+|++|.++|.
T Consensus 84 id~vi~~ag~ 93 (258)
T PRK08628 84 IDGLVNNAGV 93 (258)
T ss_pred CCEEEECCcc
Confidence 9999999983
No 269
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=97.29 E-value=0.0031 Score=53.00 Aligned_cols=93 Identities=22% Similarity=0.312 Sum_probs=55.6
Q ss_pred EEEEcCCHHHHHHHHHHHHcCCC-eEEEEcCChHHHHHHHH--cCCC-EEEeCCCCcccHHHHHHHHHHHcCCCccEEEE
Q 048013 99 VLIMGSGPIGLVTMLAARAFGAP-RIVIVDVDDYRLSVAKK--LGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 174 (216)
Q Consensus 99 vlv~Gag~~G~~~i~~a~~~g~~-~vv~~~~~~~~~~~~~~--~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 174 (216)
|+|+|+|.+|..+++.+....-. .+++.+++.++.+.+.+ .+.. .....+- .+..+ +.++. ++.|+||+
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~--~~~~~-l~~~~----~~~dvVin 73 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDV--NDPES-LAELL----RGCDVVIN 73 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--T--TTHHH-HHHHH----TTSSEEEE
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEec--CCHHH-HHHHH----hcCCEEEE
Confidence 68889999999999999877643 69999999999776543 2222 1222221 22222 44442 35799999
Q ss_pred cCCCHHHHHHHHHHhhcCCEEEEe
Q 048013 175 CAGFNKTMSTALSATRAGGKVCLV 198 (216)
Q Consensus 175 ~~g~~~~~~~~~~~l~~~G~~v~~ 198 (216)
|+|.......+-.+++.+-.++..
T Consensus 74 ~~gp~~~~~v~~~~i~~g~~yvD~ 97 (386)
T PF03435_consen 74 CAGPFFGEPVARACIEAGVHYVDT 97 (386)
T ss_dssp -SSGGGHHHHHHHHHHHT-EEEES
T ss_pred CCccchhHHHHHHHHHhCCCeecc
Confidence 999853333344445556677763
No 270
>PRK12743 oxidoreductase; Provisional
Probab=97.28 E-value=0.014 Score=45.96 Aligned_cols=81 Identities=22% Similarity=0.273 Sum_probs=49.2
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEE-cCChHHHHH----HHHcCCCE-EEeCCC-CcccHHHHHHHHHHHcCC
Q 048013 96 ETNVLIMGS-GPIGLVTMLAARAFGAPRIVIV-DVDDYRLSV----AKKLGADN-IVKVST-NLQDIAEEVEKIQKAMGT 167 (216)
Q Consensus 96 ~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~-~~~~~~~~~----~~~~g~~~-~~~~~~-~~~~~~~~~~~~~~~~~~ 167 (216)
++++||.|+ |++|..+++.+...|++ |+.+ .++.++.+. ++..+... .+..+- +.++..+.+.++.+.. .
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~ 79 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFD-IGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRL-G 79 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence 468999996 89999999999999996 6655 445444332 23345432 222221 2223333444443333 3
Q ss_pred CccEEEEcCCC
Q 048013 168 GIDVSFDCAGF 178 (216)
Q Consensus 168 ~~d~vi~~~g~ 178 (216)
++|++|.+.|.
T Consensus 80 ~id~li~~ag~ 90 (256)
T PRK12743 80 RIDVLVNNAGA 90 (256)
T ss_pred CCCEEEECCCC
Confidence 69999999874
No 271
>PLN02823 spermine synthase
Probab=97.28 E-value=0.0041 Score=51.26 Aligned_cols=101 Identities=18% Similarity=0.201 Sum_probs=62.9
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCC-CE-EEe---CCCCcccHHHHHHHHHHHcCCC
Q 048013 94 GPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGA-DN-IVK---VSTNLQDIAEEVEKIQKAMGTG 168 (216)
Q Consensus 94 ~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~-~~-~~~---~~~~~~~~~~~~~~~~~~~~~~ 168 (216)
...++|||+|+|. |..+..+++..+..++++++.+++-.+.++++-. .. .+. +.-...|..+.++ .....
T Consensus 102 ~~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~Da~~~L~----~~~~~ 176 (336)
T PLN02823 102 PNPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIINDARAELE----KRDEK 176 (336)
T ss_pred CCCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEChhHHHHh----hCCCC
Confidence 3567899998764 5555667776666679999999999998877422 10 000 0001123333332 24567
Q ss_pred ccEEEEcCCC------------HHHHH-HHHHHhhcCCEEEEec
Q 048013 169 IDVSFDCAGF------------NKTMS-TALSATRAGGKVCLVG 199 (216)
Q Consensus 169 ~d~vi~~~g~------------~~~~~-~~~~~l~~~G~~v~~g 199 (216)
+|+||--... .+.++ .+.+.|+|+|.++.-.
T Consensus 177 yDvIi~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~Gvlv~q~ 220 (336)
T PLN02823 177 FDVIIGDLADPVEGGPCYQLYTKSFYERIVKPKLNPGGIFVTQA 220 (336)
T ss_pred ccEEEecCCCccccCcchhhccHHHHHHHHHHhcCCCcEEEEec
Confidence 9997764322 23455 6788999999987543
No 272
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=97.28 E-value=0.0059 Score=44.94 Aligned_cols=44 Identities=16% Similarity=0.225 Sum_probs=36.1
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCC
Q 048013 97 TNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGA 141 (216)
Q Consensus 97 ~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~ 141 (216)
.+|.++|.|.+|..+++-+...|++ |.+.+++.++.+.+.+.++
T Consensus 2 ~~Ig~IGlG~mG~~~a~~L~~~g~~-v~~~d~~~~~~~~~~~~g~ 45 (163)
T PF03446_consen 2 MKIGFIGLGNMGSAMARNLAKAGYE-VTVYDRSPEKAEALAEAGA 45 (163)
T ss_dssp BEEEEE--SHHHHHHHHHHHHTTTE-EEEEESSHHHHHHHHHTTE
T ss_pred CEEEEEchHHHHHHHHHHHHhcCCe-EEeeccchhhhhhhHHhhh
Confidence 3688999999999999999999995 9999999999888876663
No 273
>PRK12937 short chain dehydrogenase; Provisional
Probab=97.28 E-value=0.017 Score=44.99 Aligned_cols=106 Identities=15% Similarity=0.198 Sum_probs=62.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCC-hHHHH----HHHHcCCCE-EEeCCC-CcccHHHHHHHHHHHcC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVD-DYRLS----VAKKLGADN-IVKVST-NLQDIAEEVEKIQKAMG 166 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~-~~~~~----~~~~~g~~~-~~~~~~-~~~~~~~~~~~~~~~~~ 166 (216)
++++++|+|+ |++|..+++.+...|++ ++.+.++ ++..+ .++..+... .+..+- +.++..+.++++.+..
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~- 81 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFA-VAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAF- 81 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence 5688999986 99999999999999996 5555443 32222 222333322 122221 2223334444443322
Q ss_pred CCccEEEEcCCCH----------H---------------HHHHHHHHhhcCCEEEEeccCC
Q 048013 167 TGIDVSFDCAGFN----------K---------------TMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 167 ~~~d~vi~~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
+++|++|.++|.. + .++.+++.++.+|+++.++...
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~ 142 (245)
T PRK12937 82 GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSV 142 (245)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeecc
Confidence 4799999998841 0 1344555666778999887533
No 274
>PLN02366 spermidine synthase
Probab=97.27 E-value=0.0029 Score=51.49 Aligned_cols=101 Identities=27% Similarity=0.314 Sum_probs=64.8
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHc-CC------CEEEeCCCCcccHHHHHHHHHHHc
Q 048013 93 IGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKL-GA------DNIVKVSTNLQDIAEEVEKIQKAM 165 (216)
Q Consensus 93 ~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~-g~------~~~~~~~~~~~~~~~~~~~~~~~~ 165 (216)
..+.++||++|+|. |..+..+++..+..+|++++.+++-.+.++++ .. +.-+.+ ...|..+.+++ ..
T Consensus 89 ~~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~v--i~~Da~~~l~~---~~ 162 (308)
T PLN02366 89 IPNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNL--HIGDGVEFLKN---AP 162 (308)
T ss_pred CCCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEE--EEChHHHHHhh---cc
Confidence 45678999999765 55666777766666799999999888877663 21 100110 11233333332 12
Q ss_pred CCCccEEEEcCCC----------HHHHHHHHHHhhcCCEEEEec
Q 048013 166 GTGIDVSFDCAGF----------NKTMSTALSATRAGGKVCLVG 199 (216)
Q Consensus 166 ~~~~d~vi~~~g~----------~~~~~~~~~~l~~~G~~v~~g 199 (216)
++.+|+||.-... .+.++.+.+.|+|+|.++.-+
T Consensus 163 ~~~yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q~ 206 (308)
T PLN02366 163 EGTYDAIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQA 206 (308)
T ss_pred CCCCCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEECc
Confidence 4579998875433 245788899999999997654
No 275
>PRK06484 short chain dehydrogenase; Validated
Probab=97.27 E-value=0.013 Score=51.20 Aligned_cols=82 Identities=26% Similarity=0.388 Sum_probs=54.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HHcCCCE-EEeCC-CCcccHHHHHHHHHHHcCCCcc
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KKLGADN-IVKVS-TNLQDIAEEVEKIQKAMGTGID 170 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~~g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~d 170 (216)
.++++||+|+ +++|..+++.+...|++ |+.++++.++.+.+ ++++... .+..+ .+.++..+.+.++.+.. .++|
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~iD 81 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQ-VVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREF-GRID 81 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHh-CCCC
Confidence 5788999996 89999999999999995 88888888776544 4555432 12222 12233444444443333 4799
Q ss_pred EEEEcCCC
Q 048013 171 VSFDCAGF 178 (216)
Q Consensus 171 ~vi~~~g~ 178 (216)
++|++.|.
T Consensus 82 ~li~nag~ 89 (520)
T PRK06484 82 VLVNNAGV 89 (520)
T ss_pred EEEECCCc
Confidence 99999874
No 276
>PRK07831 short chain dehydrogenase; Provisional
Probab=97.27 E-value=0.0046 Score=48.88 Aligned_cols=84 Identities=25% Similarity=0.328 Sum_probs=53.6
Q ss_pred CCCCCEEEEEcC-C-HHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHH-----cCCCEE--EeCCC-CcccHHHHHHHHH
Q 048013 93 IGPETNVLIMGS-G-PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKK-----LGADNI--VKVST-NLQDIAEEVEKIQ 162 (216)
Q Consensus 93 ~~~~~~vlv~Ga-g-~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~-----~g~~~~--~~~~~-~~~~~~~~~~~~~ 162 (216)
+..+++++|+|+ | ++|.++++.+...|++ |+++++++++.+...+ ++...+ +..+- +.++..+.+.++.
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 92 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGAR-VVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAV 92 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 345789999986 6 7999999999999995 8888888776554322 343322 22221 1223333344433
Q ss_pred HHcCCCccEEEEcCCC
Q 048013 163 KAMGTGIDVSFDCAGF 178 (216)
Q Consensus 163 ~~~~~~~d~vi~~~g~ 178 (216)
+. .+++|++|.+.|.
T Consensus 93 ~~-~g~id~li~~ag~ 107 (262)
T PRK07831 93 ER-LGRLDVLVNNAGL 107 (262)
T ss_pred HH-cCCCCEEEECCCC
Confidence 22 2479999999984
No 277
>PRK07985 oxidoreductase; Provisional
Probab=97.27 E-value=0.013 Score=47.37 Aligned_cols=106 Identities=17% Similarity=0.145 Sum_probs=63.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCh--HHHHHH----HHcCCCE-EEeCCC-CcccHHHHHHHHHHHc
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDD--YRLSVA----KKLGADN-IVKVST-NLQDIAEEVEKIQKAM 165 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~--~~~~~~----~~~g~~~-~~~~~~-~~~~~~~~~~~~~~~~ 165 (216)
.++++||+|+ |++|..+++.+...|++ |+.+.++. ++.+.+ ++.+... .+..+- +.++..+.+.++.+.
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~- 125 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGAD-VAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA- 125 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCE-EEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH-
Confidence 5678999996 89999999999999995 77765432 233222 2334322 122221 222333344444332
Q ss_pred CCCccEEEEcCCCH--------------------------HHHHHHHHHhhcCCEEEEeccCC
Q 048013 166 GTGIDVSFDCAGFN--------------------------KTMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 166 ~~~~d~vi~~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
.+++|+++.+.|.. ..++.+++.|+.+|+++.++...
T Consensus 126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~ 188 (294)
T PRK07985 126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQ 188 (294)
T ss_pred hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCch
Confidence 34799999988731 12345556666788999887543
No 278
>PRK06701 short chain dehydrogenase; Provisional
Probab=97.26 E-value=0.018 Score=46.41 Aligned_cols=107 Identities=21% Similarity=0.240 Sum_probs=63.8
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHH-HH----HHHHcCCCE-EEeCCC-CcccHHHHHHHHHHHc
Q 048013 94 GPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYR-LS----VAKKLGADN-IVKVST-NLQDIAEEVEKIQKAM 165 (216)
Q Consensus 94 ~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~-~~----~~~~~g~~~-~~~~~~-~~~~~~~~~~~~~~~~ 165 (216)
-.++++||+|+ |++|..+++.+...|++ |+.++++.+. .+ .++..+... .+..+- +.+...+.+.++.+..
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~G~~-V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~ 122 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKEGAD-IAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVREL 122 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 35789999996 89999999988889995 7777766422 22 222233322 222221 1223333344443322
Q ss_pred CCCccEEEEcCCCH--------------------------HHHHHHHHHhhcCCEEEEeccCC
Q 048013 166 GTGIDVSFDCAGFN--------------------------KTMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 166 ~~~~d~vi~~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
.++|++|.++|.. ...+.+++.++++|+++.++...
T Consensus 123 -~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~ 184 (290)
T PRK06701 123 -GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSIT 184 (290)
T ss_pred -CCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEeccc
Confidence 4689999988741 02244455566778999887544
No 279
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=97.26 E-value=0.015 Score=45.79 Aligned_cols=81 Identities=11% Similarity=0.198 Sum_probs=50.3
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HH----cCCCE--EEeCCCC-cccHHHHHHHHHHHcC
Q 048013 96 ETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KK----LGADN--IVKVSTN-LQDIAEEVEKIQKAMG 166 (216)
Q Consensus 96 ~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~----~g~~~--~~~~~~~-~~~~~~~~~~~~~~~~ 166 (216)
++++||.|+ |++|..+++.+...|++ ++.++++.++.+.. ++ .+... .+..+-. .++....+.++.+..
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~-vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~- 79 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYR-VAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIF- 79 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHc-
Confidence 468999986 89999999999889995 88888887655433 22 22111 2222222 222333344443222
Q ss_pred CCccEEEEcCCC
Q 048013 167 TGIDVSFDCAGF 178 (216)
Q Consensus 167 ~~~d~vi~~~g~ 178 (216)
.++|+++.+.|.
T Consensus 80 ~~id~vv~~ag~ 91 (259)
T PRK12384 80 GRVDLLVYNAGI 91 (259)
T ss_pred CCCCEEEECCCc
Confidence 479999999873
No 280
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=97.25 E-value=0.017 Score=45.37 Aligned_cols=82 Identities=26% Similarity=0.351 Sum_probs=53.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHH-HcCCCE-EEeCCC-CcccHHHHHHHHHHHcCCCcc
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-KLGADN-IVKVST-NLQDIAEEVEKIQKAMGTGID 170 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~-~~g~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~d 170 (216)
.+++++|+|+ |++|..+++.+...|++ |+.++++.++.+.+. +++... .+..+- +.++..+.+.++.+.. .++|
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id 82 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGAR-VVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERF-GGID 82 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCE-EEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence 4678999996 99999999999999995 889999887765543 343221 122221 2223333444443322 4699
Q ss_pred EEEEcCCC
Q 048013 171 VSFDCAGF 178 (216)
Q Consensus 171 ~vi~~~g~ 178 (216)
+++.+.+.
T Consensus 83 ~li~~ag~ 90 (257)
T PRK07067 83 ILFNNAAL 90 (257)
T ss_pred EEEECCCc
Confidence 99998873
No 281
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=97.24 E-value=0.02 Score=44.43 Aligned_cols=82 Identities=22% Similarity=0.282 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH----HHcCCCEEE-eCCC-CcccHHHHHHHHHHHcCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KKLGADNIV-KVST-NLQDIAEEVEKIQKAMGT 167 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~----~~~g~~~~~-~~~~-~~~~~~~~~~~~~~~~~~ 167 (216)
+++++||+|+ |.+|..+++.+...|.+ |+.+++++++.+.. ++.+....+ ..+- +.+...+.+.++... -.
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~ 81 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAK-VVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEA-FG 81 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH-hC
Confidence 3578999996 99999999999889996 89998987765433 233433222 1111 122233334443322 24
Q ss_pred CccEEEEcCCC
Q 048013 168 GIDVSFDCAGF 178 (216)
Q Consensus 168 ~~d~vi~~~g~ 178 (216)
++|.++.++|.
T Consensus 82 ~id~vi~~ag~ 92 (246)
T PRK05653 82 ALDILVNNAGI 92 (246)
T ss_pred CCCEEEECCCc
Confidence 68999999864
No 282
>PRK06196 oxidoreductase; Provisional
Probab=97.24 E-value=0.0047 Score=50.36 Aligned_cols=82 Identities=20% Similarity=0.289 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HHcCCCEEEeCCC-CcccHHHHHHHHHHHcCCCccE
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KKLGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDV 171 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~ 171 (216)
.+++++|+|+ |++|..+++.+...|++ |++++++.++.+.+ +++..-..+..+- +.++..+.+.++.+ ...++|+
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~-Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~-~~~~iD~ 102 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAH-VIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLD-SGRRIDI 102 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHh-cCCCCCE
Confidence 4689999996 89999999988889995 88888887765543 3332112222221 22233333444332 2357999
Q ss_pred EEEcCCC
Q 048013 172 SFDCAGF 178 (216)
Q Consensus 172 vi~~~g~ 178 (216)
+|.++|.
T Consensus 103 li~nAg~ 109 (315)
T PRK06196 103 LINNAGV 109 (315)
T ss_pred EEECCCC
Confidence 9999873
No 283
>PRK06841 short chain dehydrogenase; Provisional
Probab=97.24 E-value=0.0051 Score=48.30 Aligned_cols=82 Identities=22% Similarity=0.235 Sum_probs=53.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCE--EEeCCC-CcccHHHHHHHHHHHcCCCcc
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADN--IVKVST-NLQDIAEEVEKIQKAMGTGID 170 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~d 170 (216)
+++++||+|+ |++|..+++.+...|++ |+.++++.+..+...++.... .+..+- +.++..+.+.++.+. ..++|
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~~d 91 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGAR-VALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISA-FGRID 91 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHH-hCCCC
Confidence 4689999996 89999999999889995 888888877655554443222 222222 222333334443322 24799
Q ss_pred EEEEcCCC
Q 048013 171 VSFDCAGF 178 (216)
Q Consensus 171 ~vi~~~g~ 178 (216)
++|.++|.
T Consensus 92 ~vi~~ag~ 99 (255)
T PRK06841 92 ILVNSAGV 99 (255)
T ss_pred EEEECCCC
Confidence 99999984
No 284
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.23 E-value=0.016 Score=45.66 Aligned_cols=82 Identities=20% Similarity=0.204 Sum_probs=50.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHH---HHHHcCCC-EEEeCCCC-cccHHHHHHHHHHHcCCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS---VAKKLGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTG 168 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~---~~~~~g~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~ 168 (216)
.++++||+|+ |++|..+++.+...|++ |++++++++..+ ...+.+.. ..+..+-. .++..+.+.++.+. ..+
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~g~ 91 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGAD-IIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEE-FGK 91 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-cCC
Confidence 5789999996 89999999999999995 777777632112 22233432 12222222 22333344444332 346
Q ss_pred ccEEEEcCCC
Q 048013 169 IDVSFDCAGF 178 (216)
Q Consensus 169 ~d~vi~~~g~ 178 (216)
+|++|.+.|.
T Consensus 92 id~li~~ag~ 101 (258)
T PRK06935 92 IDILVNNAGT 101 (258)
T ss_pred CCEEEECCCC
Confidence 9999999874
No 285
>PRK05867 short chain dehydrogenase; Provisional
Probab=97.23 E-value=0.005 Score=48.41 Aligned_cols=82 Identities=23% Similarity=0.279 Sum_probs=53.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHH-H---cCCCE-EEeCC-CCcccHHHHHHHHHHHcCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-K---LGADN-IVKVS-TNLQDIAEEVEKIQKAMGT 167 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~-~---~g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 167 (216)
.++++||+|+ |++|..+++.+...|++ |+.++++.++.+.+. + .+... .+..+ .+.++..+.+.++.+.. .
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g 85 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQ-VAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAEL-G 85 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh-C
Confidence 4789999996 89999999999999995 888888877655432 2 23221 12222 12233344444443333 3
Q ss_pred CccEEEEcCCC
Q 048013 168 GIDVSFDCAGF 178 (216)
Q Consensus 168 ~~d~vi~~~g~ 178 (216)
++|+++.+.|.
T Consensus 86 ~id~lv~~ag~ 96 (253)
T PRK05867 86 GIDIAVCNAGI 96 (253)
T ss_pred CCCEEEECCCC
Confidence 79999999874
No 286
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.22 E-value=0.019 Score=44.81 Aligned_cols=82 Identities=22% Similarity=0.251 Sum_probs=49.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEE-EcCChHHHHHH----HHcCCCE-EEeCCCC-cccHHHHHHHHHHHcC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVI-VDVDDYRLSVA----KKLGADN-IVKVSTN-LQDIAEEVEKIQKAMG 166 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~-~~~~~~~~~~~----~~~g~~~-~~~~~~~-~~~~~~~~~~~~~~~~ 166 (216)
++++++|.|+ |++|..++..+...|++ |++ ..++.++.+.+ +..+... .+..+-. .++..+.++++.+..
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~-v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 80 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYD-IAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEF- 80 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence 4678999996 89999999999999986 544 46666554332 2334332 2222222 223333344443222
Q ss_pred CCccEEEEcCCC
Q 048013 167 TGIDVSFDCAGF 178 (216)
Q Consensus 167 ~~~d~vi~~~g~ 178 (216)
.++|++|.++|.
T Consensus 81 ~~id~vi~~ag~ 92 (250)
T PRK08063 81 GRLDVFVNNAAS 92 (250)
T ss_pred CCCCEEEECCCC
Confidence 468999999874
No 287
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=97.21 E-value=0.0072 Score=47.21 Aligned_cols=82 Identities=18% Similarity=0.196 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChH--HHHHHHHcCCC-EEEeCCC-CcccHHHHHHHHHHHcCCCc
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDY--RLSVAKKLGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGI 169 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~--~~~~~~~~g~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 169 (216)
.++++||+|+ |++|..+++.+...|++ |+.+++++. ..+.+++.+.. ..+..+- +.++..+.++++.+. ..++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~-vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~~ 81 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGAD-IVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEE-FGHI 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH-cCCC
Confidence 5789999996 89999999999999995 888887652 12333444432 2222222 222333344444322 2469
Q ss_pred cEEEEcCCC
Q 048013 170 DVSFDCAGF 178 (216)
Q Consensus 170 d~vi~~~g~ 178 (216)
|++|.++|.
T Consensus 82 d~li~~ag~ 90 (248)
T TIGR01832 82 DILVNNAGI 90 (248)
T ss_pred CEEEECCCC
Confidence 999999874
No 288
>TIGR00138 gidB 16S rRNA methyltransferase GidB. GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.
Probab=97.21 E-value=0.0041 Score=46.66 Aligned_cols=94 Identities=20% Similarity=0.256 Sum_probs=59.8
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH----HHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCcc
Q 048013 95 PETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 170 (216)
Q Consensus 95 ~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 170 (216)
+++++|-+|+|. |..++.+++.....+|+++|.+++..+.+ ++.+...+..+. .+..+ +. ....+|
T Consensus 42 ~~~~vLDiGcGt-G~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~~i~---~d~~~----~~--~~~~fD 111 (181)
T TIGR00138 42 DGKKVIDIGSGA-GFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNVEIVN---GRAED----FQ--HEEQFD 111 (181)
T ss_pred CCCeEEEecCCC-CccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCeEEEe---cchhh----cc--ccCCcc
Confidence 478999999864 66666666654333699999998766554 345554332221 12221 11 235799
Q ss_pred EEEEcCC-C-HHHHHHHHHHhhcCCEEEEe
Q 048013 171 VSFDCAG-F-NKTMSTALSATRAGGKVCLV 198 (216)
Q Consensus 171 ~vi~~~g-~-~~~~~~~~~~l~~~G~~v~~ 198 (216)
+|+...- . ++.++.+.+.|+|+|+++..
T Consensus 112 ~I~s~~~~~~~~~~~~~~~~LkpgG~lvi~ 141 (181)
T TIGR00138 112 VITSRALASLNVLLELTLNLLKVGGYFLAY 141 (181)
T ss_pred EEEehhhhCHHHHHHHHHHhcCCCCEEEEE
Confidence 9887542 1 34567788899999998866
No 289
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=97.20 E-value=0.0041 Score=49.73 Aligned_cols=100 Identities=17% Similarity=0.158 Sum_probs=61.7
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcC-CC------EEEeCCCCcccHHHHHHHHHHHc
Q 048013 93 IGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLG-AD------NIVKVSTNLQDIAEEVEKIQKAM 165 (216)
Q Consensus 93 ~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g-~~------~~~~~~~~~~~~~~~~~~~~~~~ 165 (216)
.+.+++||++|+|. |..+..+++......+++++.+++-.+.++++- .. ..+.+ ...+..+.+++ .
T Consensus 70 ~~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i--~~~D~~~~l~~----~ 142 (270)
T TIGR00417 70 HPNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDL--QIDDGFKFLAD----T 142 (270)
T ss_pred CCCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEE--EECchHHHHHh----C
Confidence 34556999999765 445556666554557999999988777776531 10 00110 11233333322 3
Q ss_pred CCCccEEEEcCC----------CHHHHHHHHHHhhcCCEEEEec
Q 048013 166 GTGIDVSFDCAG----------FNKTMSTALSATRAGGKVCLVG 199 (216)
Q Consensus 166 ~~~~d~vi~~~g----------~~~~~~~~~~~l~~~G~~v~~g 199 (216)
...+|+||.... ..+.++.+.+.|+|+|.++...
T Consensus 143 ~~~yDvIi~D~~~~~~~~~~l~~~ef~~~~~~~L~pgG~lv~~~ 186 (270)
T TIGR00417 143 ENTFDVIIVDSTDPVGPAETLFTKEFYELLKKALNEDGIFVAQS 186 (270)
T ss_pred CCCccEEEEeCCCCCCcccchhHHHHHHHHHHHhCCCcEEEEcC
Confidence 467999876433 1245678889999999999764
No 290
>PRK07677 short chain dehydrogenase; Provisional
Probab=97.20 E-value=0.0048 Score=48.48 Aligned_cols=81 Identities=26% Similarity=0.316 Sum_probs=52.2
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHH----HcCCCE-EEeCCC-CcccHHHHHHHHHHHcCCC
Q 048013 96 ETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK----KLGADN-IVKVST-NLQDIAEEVEKIQKAMGTG 168 (216)
Q Consensus 96 ~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~----~~g~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~ 168 (216)
+++++|.|+ |++|..+++.+...|+ +|++++++.++.+.+. +.+... .+..+- +.+++.+.+.++.+.. .+
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~ 78 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKF-GR 78 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-CC
Confidence 468999986 8999999999999999 5888888877654432 223221 222221 2233444444443333 36
Q ss_pred ccEEEEcCCC
Q 048013 169 IDVSFDCAGF 178 (216)
Q Consensus 169 ~d~vi~~~g~ 178 (216)
+|++|+++|.
T Consensus 79 id~lI~~ag~ 88 (252)
T PRK07677 79 IDALINNAAG 88 (252)
T ss_pred ccEEEECCCC
Confidence 8999999873
No 291
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.20 E-value=0.0071 Score=47.24 Aligned_cols=81 Identities=17% Similarity=0.261 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH----HHcCCCE-EEeCCC-CcccHHHHHHHHHHHcCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KKLGADN-IVKVST-NLQDIAEEVEKIQKAMGT 167 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~----~~~g~~~-~~~~~~-~~~~~~~~~~~~~~~~~~ 167 (216)
++++++|+|+ |++|..+++.+...|++ |+.++++.++.+.+ ++.+... .+..+- +.++..+.++.+.+. ..
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~-vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~ 81 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAK-LALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAED-FG 81 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence 4788999996 99999999999999984 88899887665433 2234332 222221 122333334443322 24
Q ss_pred CccEEEEcCC
Q 048013 168 GIDVSFDCAG 177 (216)
Q Consensus 168 ~~d~vi~~~g 177 (216)
++|++|.++|
T Consensus 82 ~id~vi~~ag 91 (253)
T PRK08217 82 QLNGLINNAG 91 (253)
T ss_pred CCCEEEECCC
Confidence 7899999987
No 292
>PRK06953 short chain dehydrogenase; Provisional
Probab=97.19 E-value=0.0041 Score=47.90 Aligned_cols=77 Identities=26% Similarity=0.315 Sum_probs=50.6
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCc-ccHHHHHHHHHHHcCCCccEEEE
Q 048013 97 TNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVSFD 174 (216)
Q Consensus 97 ~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~vi~ 174 (216)
++++|+|+ |++|..+++.+...|++ ++.++++.++.+.++..+... +..+-.+ ++..+.+.++ .+.++|+++.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~-v~~~~r~~~~~~~~~~~~~~~-~~~D~~~~~~v~~~~~~~---~~~~~d~vi~ 76 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWR-VIATARDAAALAALQALGAEA-LALDVADPASVAGLAWKL---DGEALDAAVY 76 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCE-EEEEECCHHHHHHHHhccceE-EEecCCCHHHHHHHHHHh---cCCCCCEEEE
Confidence 46889986 99999999988888985 888899887777666555432 2222122 2222222222 3457999999
Q ss_pred cCCC
Q 048013 175 CAGF 178 (216)
Q Consensus 175 ~~g~ 178 (216)
+.|.
T Consensus 77 ~ag~ 80 (222)
T PRK06953 77 VAGV 80 (222)
T ss_pred CCCc
Confidence 8875
No 293
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=97.19 E-value=0.028 Score=37.20 Aligned_cols=85 Identities=19% Similarity=0.236 Sum_probs=53.4
Q ss_pred EEEEEcCCHHHHHHHHHHHHcC---CCeEE-EEcCChHHHHHH-HHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEE
Q 048013 98 NVLIMGSGPIGLVTMLAARAFG---APRIV-IVDVDDYRLSVA-KKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 172 (216)
Q Consensus 98 ~vlv~Gag~~G~~~i~~a~~~g---~~~vv-~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 172 (216)
+|.++|+|.+|.+.++-+...| .+ +. +.+++.++.+.+ ++++..... .+..+.++ ..|++
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~~-v~~~~~r~~~~~~~~~~~~~~~~~~------~~~~~~~~--------~advv 65 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPHE-VIIVSSRSPEKAAELAKEYGVQATA------DDNEEAAQ--------EADVV 65 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GGE-EEEEEESSHHHHHHHHHHCTTEEES------EEHHHHHH--------HTSEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCcee-EEeeccCcHHHHHHHHHhhcccccc------CChHHhhc--------cCCEE
Confidence 4778899999999999999888 64 66 448999887765 566644321 12222222 48999
Q ss_pred EEcCCCHHHHHHHHHH---hhcCCEEEEe
Q 048013 173 FDCAGFNKTMSTALSA---TRAGGKVCLV 198 (216)
Q Consensus 173 i~~~g~~~~~~~~~~~---l~~~G~~v~~ 198 (216)
|-++.... +...++. ..++..++.+
T Consensus 66 ilav~p~~-~~~v~~~i~~~~~~~~vis~ 93 (96)
T PF03807_consen 66 ILAVKPQQ-LPEVLSEIPHLLKGKLVISI 93 (96)
T ss_dssp EE-S-GGG-HHHHHHHHHHHHTTSEEEEE
T ss_pred EEEECHHH-HHHHHHHHhhccCCCEEEEe
Confidence 99999843 3333333 4455555543
No 294
>PLN02780 ketoreductase/ oxidoreductase
Probab=97.19 E-value=0.0042 Score=50.95 Aligned_cols=41 Identities=20% Similarity=0.179 Sum_probs=34.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA 136 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~ 136 (216)
.|++++|+|+ +++|...++.+...|++ |+.+++++++.+.+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~-Vil~~R~~~~l~~~ 93 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLN-LVLVARNPDKLKDV 93 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCC-EEEEECCHHHHHHH
Confidence 5789999996 89999999888888995 88999998876644
No 295
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=97.19 E-value=0.014 Score=43.87 Aligned_cols=100 Identities=18% Similarity=0.286 Sum_probs=64.0
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHH----cCCCEEEeCCCCcccHHHHHHHHHHH
Q 048013 89 RRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKK----LGADNIVKVSTNLQDIAEEVEKIQKA 164 (216)
Q Consensus 89 ~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~ 164 (216)
....+.++.+||-+|+|. |..++.+++.....+++++|.+++..+.+++ ++...+.... .+... .
T Consensus 25 ~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~---~d~~~---~---- 93 (187)
T PRK08287 25 SKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIP---GEAPI---E---- 93 (187)
T ss_pred HhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEe---cCchh---h----
Confidence 445667889999999864 6666777776533369999999887766643 4443322211 11111 1
Q ss_pred cCCCccEEEEcCCC---HHHHHHHHHHhhcCCEEEEec
Q 048013 165 MGTGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVG 199 (216)
Q Consensus 165 ~~~~~d~vi~~~g~---~~~~~~~~~~l~~~G~~v~~g 199 (216)
....+|+++..... ...+..+.+.|+++|++++..
T Consensus 94 ~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~lv~~~ 131 (187)
T PRK08287 94 LPGKADAIFIGGSGGNLTAIIDWSLAHLHPGGRLVLTF 131 (187)
T ss_pred cCcCCCEEEECCCccCHHHHHHHHHHhcCCCeEEEEEE
Confidence 13469999864321 346678889999999998653
No 296
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=97.19 E-value=0.0079 Score=45.90 Aligned_cols=47 Identities=21% Similarity=0.310 Sum_probs=39.2
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHH-HcCC
Q 048013 94 GPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-KLGA 141 (216)
Q Consensus 94 ~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~-~~g~ 141 (216)
-.+++++|+|.|.+|..+++.+...|++ |++.|++.++.+.+. .++.
T Consensus 26 l~gk~v~I~G~G~vG~~~A~~L~~~G~~-Vvv~D~~~~~~~~~~~~~g~ 73 (200)
T cd01075 26 LEGKTVAVQGLGKVGYKLAEHLLEEGAK-LIVADINEEAVARAAELFGA 73 (200)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEcCCHHHHHHHHHHcCC
Confidence 4678999999999999999999999995 889999988766654 4454
No 297
>PRK07024 short chain dehydrogenase; Provisional
Probab=97.18 E-value=0.0051 Score=48.48 Aligned_cols=81 Identities=20% Similarity=0.190 Sum_probs=51.5
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHH-HcCCC-E--EEeCCC-CcccHHHHHHHHHHHcCCCc
Q 048013 96 ETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-KLGAD-N--IVKVST-NLQDIAEEVEKIQKAMGTGI 169 (216)
Q Consensus 96 ~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~-~~g~~-~--~~~~~~-~~~~~~~~~~~~~~~~~~~~ 169 (216)
+++++|+|+ |++|..+++.+...|++ |++++++.++.+.+. ++... . .+..+- +.++..+.+.++.+.. ..+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~-g~i 79 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGAT-LGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAH-GLP 79 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhC-CCC
Confidence 468999986 99999999999889994 888999887765443 33221 1 222221 2223333344443222 358
Q ss_pred cEEEEcCCC
Q 048013 170 DVSFDCAGF 178 (216)
Q Consensus 170 d~vi~~~g~ 178 (216)
|+++.++|.
T Consensus 80 d~lv~~ag~ 88 (257)
T PRK07024 80 DVVIANAGI 88 (257)
T ss_pred CEEEECCCc
Confidence 999998873
No 298
>PRK07340 ornithine cyclodeaminase; Validated
Probab=97.18 E-value=0.0043 Score=50.51 Aligned_cols=102 Identities=18% Similarity=0.148 Sum_probs=68.0
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHHH-cCCCeEEEEcCChHHHHH-HHHcCCCEEEeCCCCcccHHHHHHHHHHHcC
Q 048013 89 RRANIGPETNVLIMGSGPIGLVTMLAARA-FGAPRIVIVDVDDYRLSV-AKKLGADNIVKVSTNLQDIAEEVEKIQKAMG 166 (216)
Q Consensus 89 ~~~~~~~~~~vlv~Gag~~G~~~i~~a~~-~g~~~vv~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (216)
+........+++|+|+|..|...+..+.. .+.+.+.+.+++.++.+. ++++..... ... ..+..+.+
T Consensus 118 ~~La~~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~-~~~--~~~~~~av-------- 186 (304)
T PRK07340 118 RTLAPAPPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGP-TAE--PLDGEAIP-------- 186 (304)
T ss_pred HHhCCCCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCC-eeE--ECCHHHHh--------
Confidence 44444677899999999999998888864 677789999999887654 444532110 000 11222222
Q ss_pred CCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCC
Q 048013 167 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHR 203 (216)
Q Consensus 167 ~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 203 (216)
...|+|+.++.+...+-.. .++|+-.+..+|...+
T Consensus 187 ~~aDiVitaT~s~~Pl~~~--~~~~g~hi~~iGs~~p 221 (304)
T PRK07340 187 EAVDLVVTATTSRTPVYPE--AARAGRLVVAVGAFTP 221 (304)
T ss_pred hcCCEEEEccCCCCceeCc--cCCCCCEEEecCCCCC
Confidence 3699999999985543233 3789999999996544
No 299
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=97.17 E-value=0.0016 Score=52.30 Aligned_cols=47 Identities=28% Similarity=0.348 Sum_probs=40.0
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HHcC
Q 048013 94 GPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KKLG 140 (216)
Q Consensus 94 ~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~~g 140 (216)
.++++++|+|+|+.+.+++..++..|+++++++.|+.++.+.+ +.++
T Consensus 124 ~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~ 171 (283)
T COG0169 124 VTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFG 171 (283)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence 3578999999999999999999999988899999999886655 3444
No 300
>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []. Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.
Probab=97.17 E-value=0.0018 Score=50.69 Aligned_cols=107 Identities=24% Similarity=0.357 Sum_probs=63.7
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCC-eEEEEcCChHHHHHHHH----cCCCEEEeCCCCcccHHHHHHHHHH
Q 048013 89 RRANIGPETNVLIMGSGPIGLVTMLAARAFGAP-RIVIVDVDDYRLSVAKK----LGADNIVKVSTNLQDIAEEVEKIQK 163 (216)
Q Consensus 89 ~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~-~vv~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~ 163 (216)
+....+++.+||-.|+|. |..+..+++..+.. .|+++|.+++=++.+++ .+...+..+..+.++. .
T Consensus 41 ~~~~~~~g~~vLDv~~Gt-G~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da~~l-------p- 111 (233)
T PF01209_consen 41 KLLGLRPGDRVLDVACGT-GDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDAEDL-------P- 111 (233)
T ss_dssp HHHT--S--EEEEET-TT-SHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BTTB----------
T ss_pred hccCCCCCCEEEEeCCCh-HHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCHHHh-------c-
Confidence 456778999999998765 77888888876632 69999999987776643 3333332211111221 0
Q ss_pred HcCCCccEEEEcCCC------HHHHHHHHHHhhcCCEEEEeccCCCC
Q 048013 164 AMGTGIDVSFDCAGF------NKTMSTALSATRAGGKVCLVGMGHRE 204 (216)
Q Consensus 164 ~~~~~~d~vi~~~g~------~~~~~~~~~~l~~~G~~v~~g~~~~~ 204 (216)
.....||+|..+.|- ...++++.+.|+|||+++++.+..+.
T Consensus 112 ~~d~sfD~v~~~fglrn~~d~~~~l~E~~RVLkPGG~l~ile~~~p~ 158 (233)
T PF01209_consen 112 FPDNSFDAVTCSFGLRNFPDRERALREMYRVLKPGGRLVILEFSKPR 158 (233)
T ss_dssp S-TT-EEEEEEES-GGG-SSHHHHHHHHHHHEEEEEEEEEEEEEB-S
T ss_pred CCCCceeEEEHHhhHHhhCCHHHHHHHHHHHcCCCeEEEEeeccCCC
Confidence 123569999987763 35678999999999999988865543
No 301
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=97.16 E-value=0.013 Score=45.66 Aligned_cols=82 Identities=22% Similarity=0.256 Sum_probs=48.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEE-cCChHH-HHHH---HHcCCCEEE-eCCC-CcccHHHHHHHHHHHcC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIV-DVDDYR-LSVA---KKLGADNIV-KVST-NLQDIAEEVEKIQKAMG 166 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~-~~~~~~-~~~~---~~~g~~~~~-~~~~-~~~~~~~~~~~~~~~~~ 166 (216)
++++++|+|+ |++|..+++.+...|++ +++. +++..+ .+.+ ++.+..... ..+- +.++..+.+.++.+. .
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~-vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~ 79 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFK-VVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAE-V 79 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCE-EEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-h
Confidence 3678999996 99999999999999996 5553 333332 2222 333443321 1111 222333334444332 2
Q ss_pred CCccEEEEcCCC
Q 048013 167 TGIDVSFDCAGF 178 (216)
Q Consensus 167 ~~~d~vi~~~g~ 178 (216)
+++|+++.++|.
T Consensus 80 ~~id~li~~ag~ 91 (246)
T PRK12938 80 GEIDVLVNNAGI 91 (246)
T ss_pred CCCCEEEECCCC
Confidence 479999999985
No 302
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=97.14 E-value=0.05 Score=44.22 Aligned_cols=140 Identities=12% Similarity=0.126 Sum_probs=86.6
Q ss_pred CccceeEEecCCceEECCCCCCchhhhcchhhHHHHHHHHH---cCCCCCCEEEEEcC-CHHHHHHHHHHH-HcCCCeEE
Q 048013 50 GCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRR---ANIGPETNVLIMGS-GPIGLVTMLAAR-AFGAPRIV 124 (216)
Q Consensus 50 g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~a~~~l~~---~~~~~~~~vlv~Ga-g~~G~~~i~~a~-~~g~~~vv 124 (216)
-.|-+|.++..+.... +.....++.+-+.+.|+|-.-+. ..--..+.|+|.+| +.+++.++..++ ..+..++|
T Consensus 89 ~~YN~Y~r~~~d~~y~--~~~e~~~~LlrPLf~Tsfll~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~v 166 (314)
T PF11017_consen 89 PIYNQYLRVSADPAYD--PEREDWQMLLRPLFITSFLLDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVV 166 (314)
T ss_pred hhhhceeecCCCcccC--cchhHHHHHHHHHHHHHHHHHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEE
Confidence 4577777776554431 11222222233456677654332 22334467777776 788888888888 44444688
Q ss_pred EEcCChHHHHHHHHcCCC-EEEeCCCCcccHHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCC-EEEEeccCC
Q 048013 125 IVDVDDYRLSVAKKLGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGG-KVCLVGMGH 202 (216)
Q Consensus 125 ~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G-~~v~~g~~~ 202 (216)
.++ +..+....+.+|.. .++.|++ +.++ ....--+++|..|+.+....+.+.+...= ..+.+|++.
T Consensus 167 glT-S~~N~~Fve~lg~Yd~V~~Yd~--------i~~l---~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th 234 (314)
T PF11017_consen 167 GLT-SARNVAFVESLGCYDEVLTYDD--------IDSL---DAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATH 234 (314)
T ss_pred EEe-cCcchhhhhccCCceEEeehhh--------hhhc---cCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccC
Confidence 885 45566688889874 5666643 3333 23456789999999888788888887653 567778755
Q ss_pred C
Q 048013 203 R 203 (216)
Q Consensus 203 ~ 203 (216)
.
T Consensus 235 ~ 235 (314)
T PF11017_consen 235 W 235 (314)
T ss_pred c
Confidence 4
No 303
>PRK06523 short chain dehydrogenase; Provisional
Probab=97.14 E-value=0.017 Score=45.45 Aligned_cols=76 Identities=18% Similarity=0.206 Sum_probs=48.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCC-EEEeCCCC-cccHHHHHHHHHHHcCCCccE
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTGIDV 171 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~ 171 (216)
+++++||.|+ |++|..+++.+...|++ |++++++.... .+.. ..+..+-. .++..+.+.++.+. .+++|+
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~~-v~~~~r~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~ 80 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGAR-VVTTARSRPDD-----LPEGVEFVAADLTTAEGCAAVARAVLER-LGGVDI 80 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCCE-EEEEeCChhhh-----cCCceeEEecCCCCHHHHHHHHHHHHHH-cCCCCE
Confidence 5789999996 89999999999889995 88888875432 1111 11221211 22333333444322 347999
Q ss_pred EEEcCC
Q 048013 172 SFDCAG 177 (216)
Q Consensus 172 vi~~~g 177 (216)
+|+++|
T Consensus 81 vi~~ag 86 (260)
T PRK06523 81 LVHVLG 86 (260)
T ss_pred EEECCc
Confidence 999987
No 304
>PRK05650 short chain dehydrogenase; Provisional
Probab=97.14 E-value=0.034 Score=44.16 Aligned_cols=79 Identities=20% Similarity=0.312 Sum_probs=49.0
Q ss_pred EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH----HHcCCCEE-EeCCC-CcccHHHHHHHHHHHcCCCcc
Q 048013 98 NVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KKLGADNI-VKVST-NLQDIAEEVEKIQKAMGTGID 170 (216)
Q Consensus 98 ~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~----~~~g~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~d 170 (216)
+++|+|+ |++|..+++.+...|++ |+.++++.++.+.+ +..+.... +..+- +.++..+.+.++.. ...++|
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~-~~~~id 79 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGWR-LALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEE-KWGGID 79 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH-HcCCCC
Confidence 6899986 99999999988889995 88888887765533 22233321 22211 11222333333322 234799
Q ss_pred EEEEcCCC
Q 048013 171 VSFDCAGF 178 (216)
Q Consensus 171 ~vi~~~g~ 178 (216)
++|.++|.
T Consensus 80 ~lI~~ag~ 87 (270)
T PRK05650 80 VIVNNAGV 87 (270)
T ss_pred EEEECCCC
Confidence 99999884
No 305
>PRK06125 short chain dehydrogenase; Provisional
Probab=97.14 E-value=0.024 Score=44.68 Aligned_cols=79 Identities=27% Similarity=0.322 Sum_probs=50.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHH-Hc----CCC-EEEeCCCCcccHHHHHHHHHHHcCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-KL----GAD-NIVKVSTNLQDIAEEVEKIQKAMGT 167 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~-~~----g~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (216)
.+++++|.|+ +++|..+++.+...|+ +|++++++.++.+.+. ++ +.. ..+..+- .+. +.+.++.+.. .
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~--~~~-~~~~~~~~~~-g 80 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDL--SSP-EAREQLAAEA-G 80 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecC--CCH-HHHHHHHHHh-C
Confidence 4689999996 8999999999988999 4889988877655432 22 222 1222211 121 2233322222 4
Q ss_pred CccEEEEcCCC
Q 048013 168 GIDVSFDCAGF 178 (216)
Q Consensus 168 ~~d~vi~~~g~ 178 (216)
++|++|.+.|.
T Consensus 81 ~id~lv~~ag~ 91 (259)
T PRK06125 81 DIDILVNNAGA 91 (259)
T ss_pred CCCEEEECCCC
Confidence 69999999874
No 306
>PRK12746 short chain dehydrogenase; Provisional
Probab=97.14 E-value=0.018 Score=45.18 Aligned_cols=83 Identities=17% Similarity=0.333 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEE-EcCChHHHHHH-HHc---CCCE-EEeCCC-CcccHHHHHHHHHHHc-
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVI-VDVDDYRLSVA-KKL---GADN-IVKVST-NLQDIAEEVEKIQKAM- 165 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~-~~~~~~~~~~~-~~~---g~~~-~~~~~~-~~~~~~~~~~~~~~~~- 165 (216)
.+++++|+|+ |++|..+++.+...|++ |++ ..++.++.+.. +++ +... .+..+- +.+++.+.++++.+..
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~-v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~ 83 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGAL-VAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQ 83 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhc
Confidence 3578999996 99999999998888985 555 46666554322 222 2221 222221 2233333444443222
Q ss_pred ----CCCccEEEEcCCC
Q 048013 166 ----GTGIDVSFDCAGF 178 (216)
Q Consensus 166 ----~~~~d~vi~~~g~ 178 (216)
..++|++|.+.|.
T Consensus 84 ~~~~~~~id~vi~~ag~ 100 (254)
T PRK12746 84 IRVGTSEIDILVNNAGI 100 (254)
T ss_pred cccCCCCccEEEECCCC
Confidence 1469999999874
No 307
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=97.13 E-value=0.0071 Score=49.45 Aligned_cols=81 Identities=21% Similarity=0.344 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HHcCC---C-EEEeCCC-CcccHHHHHHHHHHHcCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KKLGA---D-NIVKVST-NLQDIAEEVEKIQKAMGT 167 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~~g~---~-~~~~~~~-~~~~~~~~~~~~~~~~~~ 167 (216)
.+++++|+|+ |++|..+++.+...|++ |++++++.++.+.+ +++.. . ..+..+- +..+..+.+.++. ..+.
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~-~~~~ 82 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWH-VIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFR-ALGK 82 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHH-HhCC
Confidence 4678999996 99999999988889985 88888888775543 33321 1 1111111 1222333333432 2345
Q ss_pred CccEEEEcCC
Q 048013 168 GIDVSFDCAG 177 (216)
Q Consensus 168 ~~d~vi~~~g 177 (216)
++|++|+++|
T Consensus 83 ~iD~li~nAg 92 (322)
T PRK07453 83 PLDALVCNAA 92 (322)
T ss_pred CccEEEECCc
Confidence 6999999987
No 308
>PRK06940 short chain dehydrogenase; Provisional
Probab=97.12 E-value=0.018 Score=46.05 Aligned_cols=101 Identities=17% Similarity=0.238 Sum_probs=61.0
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HH---cCCCE-EEeCCC-CcccHHHHHHHHHHHcCCCcc
Q 048013 97 TNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KK---LGADN-IVKVST-NLQDIAEEVEKIQKAMGTGID 170 (216)
Q Consensus 97 ~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~---~g~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~d 170 (216)
++++|.|+|++|..+++.+. .|++ |+.+++++++.+.+ ++ .+... .+..+- +.++..+.+.++ +. -.++|
T Consensus 3 k~~lItGa~gIG~~la~~l~-~G~~-Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~-~g~id 78 (275)
T PRK06940 3 EVVVVIGAGGIGQAIARRVG-AGKK-VLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QT-LGPVT 78 (275)
T ss_pred CEEEEECCChHHHHHHHHHh-CCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-Hh-cCCCC
Confidence 57888898999999998885 7884 88888887665433 22 23221 122221 222333344443 22 24799
Q ss_pred EEEEcCCCH---H---------------HHHHHHHHhhcCCEEEEeccC
Q 048013 171 VSFDCAGFN---K---------------TMSTALSATRAGGKVCLVGMG 201 (216)
Q Consensus 171 ~vi~~~g~~---~---------------~~~~~~~~l~~~G~~v~~g~~ 201 (216)
++|.++|.. . .++.+++.+..+|+++.++..
T Consensus 79 ~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~ 127 (275)
T PRK06940 79 GLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQ 127 (275)
T ss_pred EEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEec
Confidence 999999841 1 234555666667777766543
No 309
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=97.12 E-value=0.011 Score=46.75 Aligned_cols=98 Identities=21% Similarity=0.267 Sum_probs=67.9
Q ss_pred HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHc-CCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHc
Q 048013 87 ACRRANIGPETNVLIMGSGPIGLVTMLAARAF-GAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAM 165 (216)
Q Consensus 87 ~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~-g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (216)
.+......++.+||-+|+|. |..+..+++.. +. +|+++|.++.-.+.+++.+..... .+. .++. .
T Consensus 21 ll~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~~------~d~----~~~~--~ 86 (255)
T PRK14103 21 LLARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDART------GDV----RDWK--P 86 (255)
T ss_pred HHHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEEE------cCh----hhCC--C
Confidence 34555667889999999875 67777777765 45 599999999888888765543221 121 1221 2
Q ss_pred CCCccEEEEcCC-----C-HHHHHHHHHHhhcCCEEEEe
Q 048013 166 GTGIDVSFDCAG-----F-NKTMSTALSATRAGGKVCLV 198 (216)
Q Consensus 166 ~~~~d~vi~~~g-----~-~~~~~~~~~~l~~~G~~v~~ 198 (216)
...||+|+.... + ...++.+.+.|+|+|++++.
T Consensus 87 ~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~ 125 (255)
T PRK14103 87 KPDTDVVVSNAALQWVPEHADLLVRWVDELAPGSWIAVQ 125 (255)
T ss_pred CCCceEEEEehhhhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence 347999998553 2 34567888999999999865
No 310
>PLN02244 tocopherol O-methyltransferase
Probab=97.11 E-value=0.012 Score=48.81 Aligned_cols=97 Identities=15% Similarity=0.195 Sum_probs=63.2
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHH----cCCC-EEEeCCCCcccHHHHHHHHHHHcCCC
Q 048013 94 GPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKK----LGAD-NIVKVSTNLQDIAEEVEKIQKAMGTG 168 (216)
Q Consensus 94 ~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (216)
+++++||-+|+|. |..+..+++..|++ |+++|.++...+.+++ .+.. .+.... .|. .++. .....
T Consensus 117 ~~~~~VLDiGCG~-G~~~~~La~~~g~~-v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~---~D~----~~~~-~~~~~ 186 (340)
T PLN02244 117 KRPKRIVDVGCGI-GGSSRYLARKYGAN-VKGITLSPVQAARANALAAAQGLSDKVSFQV---ADA----LNQP-FEDGQ 186 (340)
T ss_pred CCCCeEEEecCCC-CHHHHHHHHhcCCE-EEEEECCHHHHHHHHHHHHhcCCCCceEEEE---cCc----ccCC-CCCCC
Confidence 6788999999875 66777888877884 9999999887665543 2332 111111 111 1110 12356
Q ss_pred ccEEEEcCCC------HHHHHHHHHHhhcCCEEEEecc
Q 048013 169 IDVSFDCAGF------NKTMSTALSATRAGGKVCLVGM 200 (216)
Q Consensus 169 ~d~vi~~~g~------~~~~~~~~~~l~~~G~~v~~g~ 200 (216)
||+|+..-.. ...++.+.+.|+|+|++++...
T Consensus 187 FD~V~s~~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~~ 224 (340)
T PLN02244 187 FDLVWSMESGEHMPDKRKFVQELARVAAPGGRIIIVTW 224 (340)
T ss_pred ccEEEECCchhccCCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 9999874332 2467889999999999987653
No 311
>PRK07478 short chain dehydrogenase; Provisional
Probab=97.11 E-value=0.0085 Score=47.08 Aligned_cols=82 Identities=18% Similarity=0.211 Sum_probs=53.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH----HHcCCCE-EEeCCC-CcccHHHHHHHHHHHcCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KKLGADN-IVKVST-NLQDIAEEVEKIQKAMGT 167 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~----~~~g~~~-~~~~~~-~~~~~~~~~~~~~~~~~~ 167 (216)
.+++++|.|+ |++|..+++.+...|++ |+.+++++++.+.+ ++.+... .+..+- +.++..+.+.++.+.. .
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~ 82 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAK-VVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERF-G 82 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhc-C
Confidence 4678999996 89999999999889995 88888888776543 2233332 222222 2223333444443333 3
Q ss_pred CccEEEEcCCC
Q 048013 168 GIDVSFDCAGF 178 (216)
Q Consensus 168 ~~d~vi~~~g~ 178 (216)
++|++|.++|.
T Consensus 83 ~id~li~~ag~ 93 (254)
T PRK07478 83 GLDIAFNNAGT 93 (254)
T ss_pred CCCEEEECCCC
Confidence 79999999874
No 312
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=97.11 E-value=0.017 Score=41.36 Aligned_cols=95 Identities=23% Similarity=0.330 Sum_probs=57.2
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh-------------------HH----HHHHHHcCCC-EEEeCCCCccc
Q 048013 98 NVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDD-------------------YR----LSVAKKLGAD-NIVKVSTNLQD 153 (216)
Q Consensus 98 ~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~-------------------~~----~~~~~~~g~~-~~~~~~~~~~~ 153 (216)
+|+|+|+|++|..+++.+...|..++..+|.+. .| .+.++++... .+..++. .
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~---~ 77 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPE---G 77 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEee---e
Confidence 478999999999999999999998888887652 11 1222333432 2211111 1
Q ss_pred HHH-HHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCE-EEEec
Q 048013 154 IAE-EVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGK-VCLVG 199 (216)
Q Consensus 154 ~~~-~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~-~v~~g 199 (216)
+.+ ...+ .-.++|+||+|..+........+.++..+. ++..|
T Consensus 78 ~~~~~~~~----~~~~~diVi~~~d~~~~~~~l~~~~~~~~i~~i~~~ 121 (143)
T cd01483 78 ISEDNLDD----FLDGVDLVIDAIDNIAVRRALNRACKELGIPVIDAG 121 (143)
T ss_pred cChhhHHH----HhcCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEc
Confidence 111 1111 124799999999995554555566666664 34444
No 313
>PRK04148 hypothetical protein; Provisional
Probab=97.11 E-value=0.008 Score=42.62 Aligned_cols=95 Identities=13% Similarity=0.233 Sum_probs=66.3
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEE
Q 048013 94 GPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 173 (216)
Q Consensus 94 ~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 173 (216)
.++.+++++|.| .|...+..+...|.+ |+++|.+++..+.+++.+...+.. +-.+.+. + .-+++|++.
T Consensus 15 ~~~~kileIG~G-fG~~vA~~L~~~G~~-ViaIDi~~~aV~~a~~~~~~~v~d-Dlf~p~~-----~----~y~~a~liy 82 (134)
T PRK04148 15 GKNKKIVELGIG-FYFKVAKKLKESGFD-VIVIDINEKAVEKAKKLGLNAFVD-DLFNPNL-----E----IYKNAKLIY 82 (134)
T ss_pred ccCCEEEEEEec-CCHHHHHHHHHCCCE-EEEEECCHHHHHHHHHhCCeEEEC-cCCCCCH-----H----HHhcCCEEE
Confidence 456789999998 787666666678985 999999999999998888765543 1111121 1 134799999
Q ss_pred EcCCCHHHHHHHHHHhhc-CCEEEEecc
Q 048013 174 DCAGFNKTMSTALSATRA-GGKVCLVGM 200 (216)
Q Consensus 174 ~~~g~~~~~~~~~~~l~~-~G~~v~~g~ 200 (216)
..-..++.....+++.+. +.-+++.=+
T Consensus 83 sirpp~el~~~~~~la~~~~~~~~i~~l 110 (134)
T PRK04148 83 SIRPPRDLQPFILELAKKINVPLIIKPL 110 (134)
T ss_pred EeCCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 999988877777776654 444444433
No 314
>PLN02253 xanthoxin dehydrogenase
Probab=97.11 E-value=0.0063 Score=48.59 Aligned_cols=82 Identities=22% Similarity=0.288 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HHcCC--C-EEEeCC-CCcccHHHHHHHHHHHcCCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KKLGA--D-NIVKVS-TNLQDIAEEVEKIQKAMGTG 168 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~~g~--~-~~~~~~-~~~~~~~~~~~~~~~~~~~~ 168 (216)
.+++++|.|+ |++|..+++.+...|++ |+++++++++.+.+ ++++. . ..+..+ .+.+...+.+.++.+.. ++
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~-g~ 94 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAK-VCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKF-GT 94 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHh-CC
Confidence 4678999986 89999999988889995 88888876654433 33422 1 122211 12223334444443333 46
Q ss_pred ccEEEEcCCC
Q 048013 169 IDVSFDCAGF 178 (216)
Q Consensus 169 ~d~vi~~~g~ 178 (216)
+|++|.++|.
T Consensus 95 id~li~~Ag~ 104 (280)
T PLN02253 95 LDIMVNNAGL 104 (280)
T ss_pred CCEEEECCCc
Confidence 9999998874
No 315
>PRK05855 short chain dehydrogenase; Validated
Probab=97.11 E-value=0.02 Score=50.45 Aligned_cols=82 Identities=23% Similarity=0.272 Sum_probs=52.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH----HHcCCCE-EEeCCC-CcccHHHHHHHHHHHcCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KKLGADN-IVKVST-NLQDIAEEVEKIQKAMGT 167 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~----~~~g~~~-~~~~~~-~~~~~~~~~~~~~~~~~~ 167 (216)
.+.++||+|+ |++|..+++.+...|++ |+.++++.++.+.+ ++.+... .+..|- +.+...+.+.++.+. .+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-~g 391 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAE-VVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAE-HG 391 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHh-cC
Confidence 4578999986 99999999999889995 88889988776543 2234321 222221 222333334444322 34
Q ss_pred CccEEEEcCCC
Q 048013 168 GIDVSFDCAGF 178 (216)
Q Consensus 168 ~~d~vi~~~g~ 178 (216)
++|++|+++|.
T Consensus 392 ~id~lv~~Ag~ 402 (582)
T PRK05855 392 VPDIVVNNAGI 402 (582)
T ss_pred CCcEEEECCcc
Confidence 69999999985
No 316
>PRK05854 short chain dehydrogenase; Provisional
Probab=97.11 E-value=0.0083 Score=48.95 Aligned_cols=82 Identities=17% Similarity=0.240 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HHc----CCCE--EEeCCC-CcccHHHHHHHHHHHc
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KKL----GADN--IVKVST-NLQDIAEEVEKIQKAM 165 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~~----g~~~--~~~~~~-~~~~~~~~~~~~~~~~ 165 (216)
.+++++|+|+ +++|..+++.+...|++ |+.+.++.++.+.+ +++ +... .+..+- +.++..+.+.++.+ .
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~~-Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~-~ 90 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGAE-VILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA-E 90 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH-h
Confidence 4689999996 89999999998889995 88888887765433 222 1111 122121 22233333444432 2
Q ss_pred CCCccEEEEcCCC
Q 048013 166 GTGIDVSFDCAGF 178 (216)
Q Consensus 166 ~~~~d~vi~~~g~ 178 (216)
..++|++|+++|.
T Consensus 91 ~~~iD~li~nAG~ 103 (313)
T PRK05854 91 GRPIHLLINNAGV 103 (313)
T ss_pred CCCccEEEECCcc
Confidence 3579999998874
No 317
>PRK04266 fibrillarin; Provisional
Probab=97.11 E-value=0.015 Score=45.28 Aligned_cols=104 Identities=13% Similarity=0.190 Sum_probs=61.9
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHc-C-CCEEEeCCCCcccHHHHHHHHHHHcC
Q 048013 89 RRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKL-G-ADNIVKVSTNLQDIAEEVEKIQKAMG 166 (216)
Q Consensus 89 ~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~-g-~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (216)
+...++++++||-.|+|. |..+..+++..+-..|+++|.+++.++.+.+. . ..++..+..+..+.. ....+ .
T Consensus 66 ~~l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~~~~~-~~~~l----~ 139 (226)
T PRK04266 66 KNFPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADARKPE-RYAHV----V 139 (226)
T ss_pred hhCCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCCCCcc-hhhhc----c
Confidence 457789999999999764 55566666665423699999999766544221 1 122211111111110 00111 2
Q ss_pred CCccEEEEcCCCHH----HHHHHHHHhhcCCEEEEe
Q 048013 167 TGIDVSFDCAGFNK----TMSTALSATRAGGKVCLV 198 (216)
Q Consensus 167 ~~~d~vi~~~g~~~----~~~~~~~~l~~~G~~v~~ 198 (216)
..+|+++.....+. .++.+.+.|+|+|++++.
T Consensus 140 ~~~D~i~~d~~~p~~~~~~L~~~~r~LKpGG~lvI~ 175 (226)
T PRK04266 140 EKVDVIYQDVAQPNQAEIAIDNAEFFLKDGGYLLLA 175 (226)
T ss_pred ccCCEEEECCCChhHHHHHHHHHHHhcCCCcEEEEE
Confidence 35999996555422 357888899999999983
No 318
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=97.10 E-value=0.0028 Score=50.18 Aligned_cols=95 Identities=23% Similarity=0.318 Sum_probs=61.4
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHH----cCCC-EEEeCCCCcccHHHHHHHHHHHcCCC
Q 048013 94 GPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKK----LGAD-NIVKVSTNLQDIAEEVEKIQKAMGTG 168 (216)
Q Consensus 94 ~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (216)
.++.+||-+|+|. |..+..+++. |. .|+++|.+++.++.+++ .+.. .+..+. .+. .++.......
T Consensus 43 ~~~~~vLDiGcG~-G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~---~d~----~~l~~~~~~~ 112 (255)
T PRK11036 43 PRPLRVLDAGGGE-GQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIH---CAA----QDIAQHLETP 112 (255)
T ss_pred CCCCEEEEeCCCc-hHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEE---cCH----HHHhhhcCCC
Confidence 4567899999875 7777777774 76 59999999988877754 2322 111111 122 1221113457
Q ss_pred ccEEEEcCC-----C-HHHHHHHHHHhhcCCEEEEe
Q 048013 169 IDVSFDCAG-----F-NKTMSTALSATRAGGKVCLV 198 (216)
Q Consensus 169 ~d~vi~~~g-----~-~~~~~~~~~~l~~~G~~v~~ 198 (216)
+|+|+.... + ...++.+.+.|+|+|+++++
T Consensus 113 fD~V~~~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~ 148 (255)
T PRK11036 113 VDLILFHAVLEWVADPKSVLQTLWSVLRPGGALSLM 148 (255)
T ss_pred CCEEEehhHHHhhCCHHHHHHHHHHHcCCCeEEEEE
Confidence 999986432 2 34568899999999999765
No 319
>PRK09291 short chain dehydrogenase; Provisional
Probab=97.10 E-value=0.005 Score=48.35 Aligned_cols=75 Identities=17% Similarity=0.208 Sum_probs=47.7
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHH----HcCCCE-EEeCCCCcccHHHHHHHHHHHcCCCc
Q 048013 96 ETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK----KLGADN-IVKVSTNLQDIAEEVEKIQKAMGTGI 169 (216)
Q Consensus 96 ~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~----~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (216)
++++||+|+ |++|..+++.+...|++ |++++++.++.+.+. ..+... .+..+- .+. +.+.+. ...++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~--~~~-~~~~~~---~~~~i 74 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHN-VIAGVQIAPQVTALRAEAARRGLALRVEKLDL--TDA-IDRAQA---AEWDV 74 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCcceEEEeeC--CCH-HHHHHH---hcCCC
Confidence 357999996 99999999999999985 888888876554432 223221 111111 121 123222 23479
Q ss_pred cEEEEcCC
Q 048013 170 DVSFDCAG 177 (216)
Q Consensus 170 d~vi~~~g 177 (216)
|++|.++|
T Consensus 75 d~vi~~ag 82 (257)
T PRK09291 75 DVLLNNAG 82 (257)
T ss_pred CEEEECCC
Confidence 99999987
No 320
>PRK00536 speE spermidine synthase; Provisional
Probab=97.10 E-value=0.0027 Score=50.35 Aligned_cols=101 Identities=10% Similarity=-0.110 Sum_probs=63.7
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEE
Q 048013 93 IGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 172 (216)
Q Consensus 93 ~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 172 (216)
....++|||+|+|- |..+-.++|.-. +|+.++.+++-.+.++++-....-..++..-+....+. +.....+|+|
T Consensus 70 h~~pk~VLIiGGGD-Gg~~REvLkh~~--~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv~l~~~~~---~~~~~~fDVI 143 (262)
T PRK00536 70 KKELKEVLIVDGFD-LELAHQLFKYDT--HVDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLL---DLDIKKYDLI 143 (262)
T ss_pred CCCCCeEEEEcCCc-hHHHHHHHCcCC--eeEEEECCHHHHHHHHHHCHHHHHhhcCCCEEEeehhh---hccCCcCCEE
Confidence 45679999998764 445666777643 69999999998888887322100001111111111111 1223579996
Q ss_pred E-EcCCCHHHHHHHHHHhhcCCEEEEec
Q 048013 173 F-DCAGFNKTMSTALSATRAGGKVCLVG 199 (216)
Q Consensus 173 i-~~~g~~~~~~~~~~~l~~~G~~v~~g 199 (216)
| |.+-+++..+.+.+.|+++|.++.=+
T Consensus 144 IvDs~~~~~fy~~~~~~L~~~Gi~v~Qs 171 (262)
T PRK00536 144 ICLQEPDIHKIDGLKRMLKEDGVFISVA 171 (262)
T ss_pred EEcCCCChHHHHHHHHhcCCCcEEEECC
Confidence 5 44667788889999999999998654
No 321
>CHL00194 ycf39 Ycf39; Provisional
Probab=97.09 E-value=0.014 Score=47.66 Aligned_cols=94 Identities=16% Similarity=0.200 Sum_probs=59.6
Q ss_pred EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEEcC
Q 048013 98 NVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 176 (216)
Q Consensus 98 ~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 176 (216)
+|+|+|+ |-+|..+++.+...|.+ |++++++.++...+...+...+. .+-. +. +.+.+.. .++|+||.++
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~-V~~l~R~~~~~~~l~~~~v~~v~-~Dl~--d~-~~l~~al----~g~d~Vi~~~ 72 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQ-VRCLVRNLRKASFLKEWGAELVY-GDLS--LP-ETLPPSF----KGVTAIIDAS 72 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCe-EEEEEcChHHhhhHhhcCCEEEE-CCCC--CH-HHHHHHH----CCCCEEEECC
Confidence 6899996 99999999999889985 88888887665544444554332 1111 11 1232221 3689999987
Q ss_pred CCH------------HHHHHHHHHhhcCC--EEEEecc
Q 048013 177 GFN------------KTMSTALSATRAGG--KVCLVGM 200 (216)
Q Consensus 177 g~~------------~~~~~~~~~l~~~G--~~v~~g~ 200 (216)
+.. ......++.++..| +++.+|.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss 110 (317)
T CHL00194 73 TSRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSI 110 (317)
T ss_pred CCCCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEecc
Confidence 631 11234556665555 7888775
No 322
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=97.09 E-value=0.012 Score=45.34 Aligned_cols=115 Identities=25% Similarity=0.353 Sum_probs=72.0
Q ss_pred CCEEEEEc-CCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHc----CCCEEEeCC---CCcccHHHHHHHHHHHcCC
Q 048013 96 ETNVLIMG-SGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKL----GADNIVKVS---TNLQDIAEEVEKIQKAMGT 167 (216)
Q Consensus 96 ~~~vlv~G-ag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~----g~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 167 (216)
|+++++.| +|++|+.....+...|+. +.+++-+.|+.+...+| ....++.+. ....+..+..+++..+.|
T Consensus 5 GKna~vtggagGIGl~~sk~Ll~kgik-~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg- 82 (261)
T KOG4169|consen 5 GKNALVTGGAGGIGLATSKALLEKGIK-VLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFG- 82 (261)
T ss_pred CceEEEecCCchhhHHHHHHHHHcCch-heeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhC-
Confidence 78899997 699999999999999997 66666666665554443 222232211 223445555555554444
Q ss_pred CccEEEEcCCCH-----------------HHHHHHHHHhh-----cCCEEEEeccCCCCCcccchhh
Q 048013 168 GIDVSFDCAGFN-----------------KTMSTALSATR-----AGGKVCLVGMGHREMTVPLTPA 212 (216)
Q Consensus 168 ~~d~vi~~~g~~-----------------~~~~~~~~~l~-----~~G~~v~~g~~~~~~~~~~~~~ 212 (216)
-+|+.|+..|-. .....+++.+. ++|.++.+|...+--+.+..|+
T Consensus 83 ~iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pV 149 (261)
T KOG4169|consen 83 TIDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPV 149 (261)
T ss_pred ceEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchh
Confidence 689999988841 12344555552 5688998886555344444444
No 323
>PRK07791 short chain dehydrogenase; Provisional
Probab=97.08 E-value=0.033 Score=44.78 Aligned_cols=83 Identities=25% Similarity=0.327 Sum_probs=50.9
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCh---------HHHH-HHHH---cCCCE-EEeCC-CCcccHHHH
Q 048013 94 GPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDD---------YRLS-VAKK---LGADN-IVKVS-TNLQDIAEE 157 (216)
Q Consensus 94 ~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~---------~~~~-~~~~---~g~~~-~~~~~-~~~~~~~~~ 157 (216)
-+++++||+|+ +++|..+++.+...|++ |++++++. ++.+ ..++ .+... .+..+ .+.++..+.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~-vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~ 82 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGAR-VVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANL 82 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCE-EEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence 46789999996 89999999988889995 77776653 3322 2222 23332 12222 122333444
Q ss_pred HHHHHHHcCCCccEEEEcCCC
Q 048013 158 VEKIQKAMGTGIDVSFDCAGF 178 (216)
Q Consensus 158 ~~~~~~~~~~~~d~vi~~~g~ 178 (216)
+.++.+.. +++|++|+++|.
T Consensus 83 ~~~~~~~~-g~id~lv~nAG~ 102 (286)
T PRK07791 83 VDAAVETF-GGLDVLVNNAGI 102 (286)
T ss_pred HHHHHHhc-CCCCEEEECCCC
Confidence 44444333 469999999884
No 324
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=97.08 E-value=0.015 Score=44.87 Aligned_cols=35 Identities=29% Similarity=0.401 Sum_probs=31.4
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 048013 95 PETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVD 129 (216)
Q Consensus 95 ~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~ 129 (216)
...+|+|+|+|++|..+++.+...|..+++.+|.+
T Consensus 27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 45679999999999999999999999889999887
No 325
>PRK08703 short chain dehydrogenase; Provisional
Probab=97.08 E-value=0.0076 Score=46.90 Aligned_cols=83 Identities=19% Similarity=0.339 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HH---cCCCE--E--EeCCC-CcccHHHHHHHHHHH
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KK---LGADN--I--VKVST-NLQDIAEEVEKIQKA 164 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~---~g~~~--~--~~~~~-~~~~~~~~~~~~~~~ 164 (216)
++++++|.|+ |++|..+++.+...|++ |+++++++++.+.+ ++ .+... . .+..+ ..+++.+...++.+.
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGAT-VILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCE-EEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 4678999996 89999999999889995 89999988765543 22 22111 1 12211 112333334444333
Q ss_pred cCCCccEEEEcCCC
Q 048013 165 MGTGIDVSFDCAGF 178 (216)
Q Consensus 165 ~~~~~d~vi~~~g~ 178 (216)
....+|++|.++|.
T Consensus 84 ~~~~id~vi~~ag~ 97 (239)
T PRK08703 84 TQGKLDGIVHCAGY 97 (239)
T ss_pred hCCCCCEEEEeccc
Confidence 32478999999984
No 326
>PLN03139 formate dehydrogenase; Provisional
Probab=97.08 E-value=0.0059 Score=51.23 Aligned_cols=89 Identities=16% Similarity=0.209 Sum_probs=59.8
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEE
Q 048013 95 PETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 174 (216)
Q Consensus 95 ~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 174 (216)
.|++|.|+|.|.+|..+++.++.+|++ |++.+++....+..++.+.... .+ +.++. ...|+|+.
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~~-V~~~d~~~~~~~~~~~~g~~~~-------~~----l~ell----~~sDvV~l 261 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNCN-LLYHDRLKMDPELEKETGAKFE-------ED----LDAML----PKCDVVVI 261 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCCE-EEEECCCCcchhhHhhcCceec-------CC----HHHHH----hhCCEEEE
Confidence 578999999999999999999999995 8888887544444444443211 12 22221 23788887
Q ss_pred cCCCHHHH-----HHHHHHhhcCCEEEEec
Q 048013 175 CAGFNKTM-----STALSATRAGGKVCLVG 199 (216)
Q Consensus 175 ~~g~~~~~-----~~~~~~l~~~G~~v~~g 199 (216)
++...... ...+..|+++..+|.++
T Consensus 262 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~a 291 (386)
T PLN03139 262 NTPLTEKTRGMFNKERIAKMKKGVLIVNNA 291 (386)
T ss_pred eCCCCHHHHHHhCHHHHhhCCCCeEEEECC
Confidence 77742211 45667788888777776
No 327
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=97.07 E-value=0.01 Score=45.11 Aligned_cols=98 Identities=15% Similarity=0.230 Sum_probs=61.4
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHH----cCCCEEEeCCCCcccHHHHHHHHHHH
Q 048013 89 RRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKK----LGADNIVKVSTNLQDIAEEVEKIQKA 164 (216)
Q Consensus 89 ~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~ 164 (216)
+.....++.+||.+|+|. |..++.+++. |. .|+++|.+++-.+.+++ .+...+... ..++ .++ .
T Consensus 24 ~~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v~~~---~~d~----~~~--~ 91 (197)
T PRK11207 24 EAVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNLHTA---VVDL----NNL--T 91 (197)
T ss_pred HhcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcceEE---ecCh----hhC--C
Confidence 334456778999999875 7777777774 77 59999999876665543 233221111 1121 111 1
Q ss_pred cCCCccEEEEcCC----C----HHHHHHHHHHhhcCCEEEEe
Q 048013 165 MGTGIDVSFDCAG----F----NKTMSTALSATRAGGKVCLV 198 (216)
Q Consensus 165 ~~~~~d~vi~~~g----~----~~~~~~~~~~l~~~G~~v~~ 198 (216)
....||+|+.... . ...++.+.+.|+|+|.++++
T Consensus 92 ~~~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~ 133 (197)
T PRK11207 92 FDGEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIV 133 (197)
T ss_pred cCCCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 2346999997643 1 24567888899999996544
No 328
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=97.07 E-value=0.022 Score=44.57 Aligned_cols=77 Identities=18% Similarity=0.228 Sum_probs=48.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCC-EEEeCCC-CcccHHHHHHHHHHHcCCCccE
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGIDV 171 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~ 171 (216)
+++++||+|+ |.+|..+++.+...|++ |+.++++. ....+.. ..+..+- +.+.+.+.+.++.+. ..++|+
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~-v~~~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~ 79 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAK-VIGFDQAF-----LTQEDYPFATFVLDVSDAAAVAQVCQRLLAE-TGPLDV 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEecch-----hhhcCCceEEEEecCCCHHHHHHHHHHHHHH-cCCCCE
Confidence 4688999996 89999999998889995 88888775 1222222 1122111 222333444444322 346999
Q ss_pred EEEcCCC
Q 048013 172 SFDCAGF 178 (216)
Q Consensus 172 vi~~~g~ 178 (216)
+|.+.|.
T Consensus 80 vi~~ag~ 86 (252)
T PRK08220 80 LVNAAGI 86 (252)
T ss_pred EEECCCc
Confidence 9999885
No 329
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=97.07 E-value=0.014 Score=46.20 Aligned_cols=99 Identities=25% Similarity=0.313 Sum_probs=66.6
Q ss_pred HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCC-EEEeCCCCcccHHHHHHHHHHHcC
Q 048013 88 CRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGAD-NIVKVSTNLQDIAEEVEKIQKAMG 166 (216)
Q Consensus 88 l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~ 166 (216)
+....++++++||-+|+|. |..+..+++..+..+|+++|.++...+.+++.-.. ..+. .+. .++. ..
T Consensus 24 l~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~-----~d~----~~~~--~~ 91 (258)
T PRK01683 24 LARVPLENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVE-----ADI----ASWQ--PP 91 (258)
T ss_pred HhhCCCcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEE-----Cch----hccC--CC
Confidence 3445667889999999874 66777788776434699999999888877654222 2221 111 1111 23
Q ss_pred CCccEEEEcCCC------HHHHHHHHHHhhcCCEEEEe
Q 048013 167 TGIDVSFDCAGF------NKTMSTALSATRAGGKVCLV 198 (216)
Q Consensus 167 ~~~d~vi~~~g~------~~~~~~~~~~l~~~G~~v~~ 198 (216)
..+|+|+....- ...++.+.+.|+|+|++++.
T Consensus 92 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~~~~~ 129 (258)
T PRK01683 92 QALDLIFANASLQWLPDHLELFPRLVSLLAPGGVLAVQ 129 (258)
T ss_pred CCccEEEEccChhhCCCHHHHHHHHHHhcCCCcEEEEE
Confidence 479999875442 24678889999999998875
No 330
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.07 E-value=0.014 Score=47.03 Aligned_cols=111 Identities=27% Similarity=0.357 Sum_probs=70.9
Q ss_pred cCCCCCCEEEEEc-CCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHH-cCCCEEE----eCCCCcccH---HHHHHHH
Q 048013 91 ANIGPETNVLIMG-SGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKK-LGADNIV----KVSTNLQDI---AEEVEKI 161 (216)
Q Consensus 91 ~~~~~~~~vlv~G-ag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~-~g~~~~~----~~~~~~~~~---~~~~~~~ 161 (216)
.+.++...++|.| +.++|++++.-++..|+. |.++.++.+|+..+++ +.....+ -++.+-.++ +..++++
T Consensus 28 ~~~k~~~hi~itggS~glgl~la~e~~~~ga~-Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l 106 (331)
T KOG1210|consen 28 VKPKPRRHILITGGSSGLGLALALECKREGAD-VTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEEL 106 (331)
T ss_pred cccCccceEEEecCcchhhHHHHHHHHHccCc-eEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhh
Confidence 3445667899997 589999999999999996 8889899998877643 4432211 111111122 2223333
Q ss_pred HHHcCCCccEEEEcCCCH-------------------------HHHHHHHHHhhc---CCEEEEeccCCC
Q 048013 162 QKAMGTGIDVSFDCAGFN-------------------------KTMSTALSATRA---GGKVCLVGMGHR 203 (216)
Q Consensus 162 ~~~~~~~~d~vi~~~g~~-------------------------~~~~~~~~~l~~---~G~~v~~g~~~~ 203 (216)
. .....+|.+|.|+|.. ....+.++.++. .|++++++....
T Consensus 107 ~-~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a 175 (331)
T KOG1210|consen 107 R-DLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLA 175 (331)
T ss_pred h-hccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhh
Confidence 2 2345799999999972 134556666643 459999886444
No 331
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=97.07 E-value=0.0042 Score=47.75 Aligned_cols=100 Identities=20% Similarity=0.174 Sum_probs=63.4
Q ss_pred HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHH----cCCCEEEeCCCCcccHHHHHHHHHH
Q 048013 88 CRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKK----LGADNIVKVSTNLQDIAEEVEKIQK 163 (216)
Q Consensus 88 l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~ 163 (216)
++...++++.+||-+|+|. |..+..+++.. . .++.++.+++..+.+++ .+...+..... +..+...
T Consensus 71 ~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~---d~~~~~~---- 140 (212)
T PRK00312 71 TELLELKPGDRVLEIGTGS-GYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNVSVRHG---DGWKGWP---- 140 (212)
T ss_pred HHhcCCCCCCEEEEECCCc-cHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCceEEEEC---CcccCCC----
Confidence 4556788999999999764 55555555553 3 59999999877665533 45443221111 1111110
Q ss_pred HcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEe
Q 048013 164 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV 198 (216)
Q Consensus 164 ~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~ 198 (216)
....||.|+....-....+...+.|+++|+++..
T Consensus 141 -~~~~fD~I~~~~~~~~~~~~l~~~L~~gG~lv~~ 174 (212)
T PRK00312 141 -AYAPFDRILVTAAAPEIPRALLEQLKEGGILVAP 174 (212)
T ss_pred -cCCCcCEEEEccCchhhhHHHHHhcCCCcEEEEE
Confidence 1246999887666556667888999999998754
No 332
>PRK06194 hypothetical protein; Provisional
Probab=97.06 E-value=0.0099 Score=47.60 Aligned_cols=82 Identities=22% Similarity=0.319 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HHc---CCCE-EEeCCC-CcccHHHHHHHHHHHcCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KKL---GADN-IVKVST-NLQDIAEEVEKIQKAMGT 167 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~~---g~~~-~~~~~~-~~~~~~~~~~~~~~~~~~ 167 (216)
.++++||+|+ |++|..+++.+...|++ |++++++.++.+.. +++ +... .+..+- +.++..+.+..+.+. ..
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~-~g 82 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGMK-LVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALER-FG 82 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence 3578999986 99999999988889995 88888887655433 222 3322 122221 122333333333322 34
Q ss_pred CccEEEEcCCC
Q 048013 168 GIDVSFDCAGF 178 (216)
Q Consensus 168 ~~d~vi~~~g~ 178 (216)
++|++|.++|.
T Consensus 83 ~id~vi~~Ag~ 93 (287)
T PRK06194 83 AVHLLFNNAGV 93 (287)
T ss_pred CCCEEEECCCC
Confidence 68999999985
No 333
>PLN03075 nicotianamine synthase; Provisional
Probab=97.06 E-value=0.0081 Score=48.45 Aligned_cols=100 Identities=22% Similarity=0.237 Sum_probs=65.7
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChHHHHHHHHcC-----CCEEEeCCCCcccHHHHHHHHHHHcC
Q 048013 93 IGPETNVLIMGSGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKKLG-----ADNIVKVSTNLQDIAEEVEKIQKAMG 166 (216)
Q Consensus 93 ~~~~~~vlv~Gag~~G~~~i~~a~~~g-~~~vv~~~~~~~~~~~~~~~g-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (216)
..++++|+-+|+|+.++.++.+++... -.+++.+|.+++..+.+++.- ....+.+. ..|..+ .. ...
T Consensus 121 ~~~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~--~~Da~~----~~-~~l 193 (296)
T PLN03075 121 NGVPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFH--TADVMD----VT-ESL 193 (296)
T ss_pred cCCCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEE--ECchhh----cc-ccc
Confidence 347899999999988887777776543 236999999999888776532 22211111 122211 11 012
Q ss_pred CCccEEEEcC------CC-HHHHHHHHHHhhcCCEEEEec
Q 048013 167 TGIDVSFDCA------GF-NKTMSTALSATRAGGKVCLVG 199 (216)
Q Consensus 167 ~~~d~vi~~~------g~-~~~~~~~~~~l~~~G~~v~~g 199 (216)
.+||+||-.+ .. ...++...+.|+|||.+++-.
T Consensus 194 ~~FDlVF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~ 233 (296)
T PLN03075 194 KEYDVVFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS 233 (296)
T ss_pred CCcCEEEEecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence 5799999875 22 356788999999999998654
No 334
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=97.06 E-value=0.013 Score=48.43 Aligned_cols=35 Identities=34% Similarity=0.540 Sum_probs=31.3
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 048013 95 PETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVD 129 (216)
Q Consensus 95 ~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~ 129 (216)
...+|+|+|+|++|..+++.+...|..++..+|.+
T Consensus 23 ~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D 57 (339)
T PRK07688 23 REKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD 57 (339)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 44779999999999999999999999889999886
No 335
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=97.05 E-value=0.0078 Score=44.60 Aligned_cols=79 Identities=14% Similarity=0.154 Sum_probs=55.3
Q ss_pred CCCCCCEEEEEcCCHH-HHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCcc
Q 048013 92 NIGPETNVLIMGSGPI-GLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 170 (216)
Q Consensus 92 ~~~~~~~vlv~Gag~~-G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 170 (216)
.--.+++|+|+|+|.+ |..+++.++..|++ |+++.++.+ + +.+.. ..+|
T Consensus 40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~-V~v~~r~~~---------------------~----l~~~l----~~aD 89 (168)
T cd01080 40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNAT-VTVCHSKTK---------------------N----LKEHT----KQAD 89 (168)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHhhCCCE-EEEEECCch---------------------h----HHHHH----hhCC
Confidence 3468899999999875 99899999999994 777776521 1 11111 2489
Q ss_pred EEEEcCCCHHHHHHHHHHhhcCCEEEEeccCC
Q 048013 171 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 171 ~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
+||.+++.+..+.. +.++++-.++.++.+.
T Consensus 90 iVIsat~~~~ii~~--~~~~~~~viIDla~pr 119 (168)
T cd01080 90 IVIVAVGKPGLVKG--DMVKPGAVVIDVGINR 119 (168)
T ss_pred EEEEcCCCCceecH--HHccCCeEEEEccCCC
Confidence 99999998553322 2466677778888765
No 336
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=97.05 E-value=0.041 Score=43.87 Aligned_cols=101 Identities=16% Similarity=0.307 Sum_probs=60.2
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChH-------------------HH----HHHHHcCCC-EEEeCCCC
Q 048013 95 PETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDY-------------------RL----SVAKKLGAD-NIVKVSTN 150 (216)
Q Consensus 95 ~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~-------------------~~----~~~~~~g~~-~~~~~~~~ 150 (216)
.+.+|+|+|+|++|..++..+...|..++..+|.+.- |. +.+.++... .+..++..
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~ 108 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDF 108 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEecc
Confidence 4578999999999999999999999888888886621 11 122233332 22222110
Q ss_pred cccHHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCC-EEEEecc
Q 048013 151 LQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGG-KVCLVGM 200 (216)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G-~~v~~g~ 200 (216)
- + .+.+.++ ....+|+||||+.....-..+.+.+...+ .++..|.
T Consensus 109 i-~-~e~~~~l---l~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gG 154 (268)
T PRK15116 109 I-T-PDNVAEY---MSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGG 154 (268)
T ss_pred c-C-hhhHHHH---hcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 0 0 1122222 23469999999998544344555555554 5555543
No 337
>PLN00203 glutamyl-tRNA reductase
Probab=97.05 E-value=0.0076 Score=52.55 Aligned_cols=98 Identities=16% Similarity=0.300 Sum_probs=63.8
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEE
Q 048013 95 PETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 173 (216)
Q Consensus 95 ~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 173 (216)
.+.+|+|+|+|.+|.++++.+...|+..|++++++.++.+.+ ++++...+... .+.+ +.+. -...|+||
T Consensus 265 ~~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~-----~~~d-l~~a----l~~aDVVI 334 (519)
T PLN00203 265 ASARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYK-----PLDE-MLAC----AAEADVVF 334 (519)
T ss_pred CCCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEee-----cHhh-HHHH----HhcCCEEE
Confidence 368899999999999999999999987799999998886654 44542211110 1111 1111 13689999
Q ss_pred EcCCCHHH--HHHHHHHhhcC----C---EEEEeccCC
Q 048013 174 DCAGFNKT--MSTALSATRAG----G---KVCLVGMGH 202 (216)
Q Consensus 174 ~~~g~~~~--~~~~~~~l~~~----G---~~v~~g~~~ 202 (216)
.+++.+.. ....++.+.+. + .++.++.+.
T Consensus 335 sAT~s~~pvI~~e~l~~~~~~~~~~~~~~~~IDLAvPR 372 (519)
T PLN00203 335 TSTSSETPLFLKEHVEALPPASDTVGGKRLFVDISVPR 372 (519)
T ss_pred EccCCCCCeeCHHHHHHhhhcccccCCCeEEEEeCCCC
Confidence 99986432 24455544321 2 577888765
No 338
>PRK07574 formate dehydrogenase; Provisional
Probab=97.04 E-value=0.0066 Score=50.97 Aligned_cols=89 Identities=19% Similarity=0.244 Sum_probs=59.3
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEE
Q 048013 95 PETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 174 (216)
Q Consensus 95 ~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 174 (216)
.+++|.|+|.|.+|..+++.++.+|++ |++.+++....+..+.++... + .+ +.++. ...|+|+-
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~~-V~~~dr~~~~~~~~~~~g~~~---~----~~----l~ell----~~aDvV~l 254 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDVK-LHYTDRHRLPEEVEQELGLTY---H----VS----FDSLV----SVCDVVTI 254 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCE-EEEECCCCCchhhHhhcCcee---c----CC----HHHHh----hcCCEEEE
Confidence 567899999999999999999999995 899988754333334444321 1 11 22221 24788887
Q ss_pred cCCCHHHH-----HHHHHHhhcCCEEEEec
Q 048013 175 CAGFNKTM-----STALSATRAGGKVCLVG 199 (216)
Q Consensus 175 ~~g~~~~~-----~~~~~~l~~~G~~v~~g 199 (216)
+....... ...+..|+++..++.++
T Consensus 255 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~a 284 (385)
T PRK07574 255 HCPLHPETEHLFDADVLSRMKRGSYLVNTA 284 (385)
T ss_pred cCCCCHHHHHHhCHHHHhcCCCCcEEEECC
Confidence 77742221 45666778887777766
No 339
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=97.04 E-value=0.015 Score=47.99 Aligned_cols=36 Identities=33% Similarity=0.479 Sum_probs=31.7
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 048013 95 PETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDD 130 (216)
Q Consensus 95 ~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~ 130 (216)
...+|+|+|+|++|..+++.+...|..++.++|.+.
T Consensus 23 ~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 23 REKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 446799999999999999999999998888898874
No 340
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=97.04 E-value=0.01 Score=44.23 Aligned_cols=94 Identities=17% Similarity=0.314 Sum_probs=61.2
Q ss_pred EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEEcC
Q 048013 98 NVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 176 (216)
Q Consensus 98 ~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 176 (216)
+|.|+|+ |.+|..+++=|+..|.. |+++.|++.|....+..-+ .. .+--+.. .+.+ .-.|+|+||++.
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHe-VTAivRn~~K~~~~~~~~i---~q--~Difd~~-~~a~----~l~g~DaVIsA~ 70 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHE-VTAIVRNASKLAARQGVTI---LQ--KDIFDLT-SLAS----DLAGHDAVISAF 70 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCe-eEEEEeChHhcccccccee---ec--ccccChh-hhHh----hhcCCceEEEec
Confidence 5788896 99999999999999996 9999999988755422111 10 0000111 1111 124899999998
Q ss_pred CCH---------HHHHHHHHHhhcCC--EEEEeccCC
Q 048013 177 GFN---------KTMSTALSATRAGG--KVCLVGMGH 202 (216)
Q Consensus 177 g~~---------~~~~~~~~~l~~~G--~~v~~g~~~ 202 (216)
+.. ...+..+..|+..| |+..+|...
T Consensus 71 ~~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAG 107 (211)
T COG2910 71 GAGASDNDELHSKSIEALIEALKGAGVPRLLVVGGAG 107 (211)
T ss_pred cCCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence 863 12345667777644 888888543
No 341
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=97.03 E-value=0.011 Score=46.61 Aligned_cols=79 Identities=30% Similarity=0.322 Sum_probs=50.6
Q ss_pred EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HHc---CCCEEEeCCC-CcccHHHHHHHHHHHcCCCccE
Q 048013 98 NVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KKL---GADNIVKVST-NLQDIAEEVEKIQKAMGTGIDV 171 (216)
Q Consensus 98 ~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~~---g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~ 171 (216)
++||+|+ +++|..+++.+...|++ |+.+++++++.+.+ +++ +....+..+- +.++..+.+.++.+.. .++|+
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~-g~id~ 79 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGAR-VVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELL-GGIDA 79 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhc-CCCCE
Confidence 6899986 89999999999889995 88889987765433 222 3222222221 2233444444443322 47999
Q ss_pred EEEcCCC
Q 048013 172 SFDCAGF 178 (216)
Q Consensus 172 vi~~~g~ 178 (216)
+|.+.|.
T Consensus 80 li~naG~ 86 (259)
T PRK08340 80 LVWNAGN 86 (259)
T ss_pred EEECCCC
Confidence 9999874
No 342
>PRK07454 short chain dehydrogenase; Provisional
Probab=97.03 E-value=0.014 Score=45.47 Aligned_cols=83 Identities=23% Similarity=0.251 Sum_probs=52.5
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHH----HcCCCE-EEeCCC-CcccHHHHHHHHHHHcC
Q 048013 94 GPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK----KLGADN-IVKVST-NLQDIAEEVEKIQKAMG 166 (216)
Q Consensus 94 ~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~----~~g~~~-~~~~~~-~~~~~~~~~~~~~~~~~ 166 (216)
.+.++++|.|+ |++|..+++.+...|++ |++++++.++.+.+. +.+... .+..+- +.++..+.+.++.+. .
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~ 81 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGWD-LALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQ-F 81 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHH-c
Confidence 35678999986 99999999999989994 899999877654432 222222 222221 222333334443322 2
Q ss_pred CCccEEEEcCCC
Q 048013 167 TGIDVSFDCAGF 178 (216)
Q Consensus 167 ~~~d~vi~~~g~ 178 (216)
.++|+++.++|.
T Consensus 82 ~~id~lv~~ag~ 93 (241)
T PRK07454 82 GCPDVLINNAGM 93 (241)
T ss_pred CCCCEEEECCCc
Confidence 469999999984
No 343
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=97.03 E-value=0.034 Score=45.41 Aligned_cols=81 Identities=25% Similarity=0.366 Sum_probs=51.0
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcC-CCeEEEEcCChHHHHHH-HHcCC--CE--EEeCCC-CcccHHHHHHHHHHHcCC
Q 048013 96 ETNVLIMGS-GPIGLVTMLAARAFG-APRIVIVDVDDYRLSVA-KKLGA--DN--IVKVST-NLQDIAEEVEKIQKAMGT 167 (216)
Q Consensus 96 ~~~vlv~Ga-g~~G~~~i~~a~~~g-~~~vv~~~~~~~~~~~~-~~~g~--~~--~~~~~~-~~~~~~~~~~~~~~~~~~ 167 (216)
+++++|.|+ +++|..+++.+...| + +|+.+.+++++.+.+ +++.. .. .+..+- +..+..+.+.++.+ ..+
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~~~ 80 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEW-HVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRE-SGR 80 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHH-hCC
Confidence 568999996 899999998888889 7 488888887765543 33431 11 121121 22233344444432 234
Q ss_pred CccEEEEcCCC
Q 048013 168 GIDVSFDCAGF 178 (216)
Q Consensus 168 ~~d~vi~~~g~ 178 (216)
++|++|.++|.
T Consensus 81 ~iD~lI~nAG~ 91 (314)
T TIGR01289 81 PLDALVCNAAV 91 (314)
T ss_pred CCCEEEECCCc
Confidence 79999999873
No 344
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=97.03 E-value=0.017 Score=45.15 Aligned_cols=102 Identities=25% Similarity=0.367 Sum_probs=70.9
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChHHHHHHH----HcCCCEEEeCCCCcccHHHHHHHHHH
Q 048013 89 RRANIGPETNVLIMGSGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAK----KLGADNIVKVSTNLQDIAEEVEKIQK 163 (216)
Q Consensus 89 ~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~-~~vv~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~ 163 (216)
...++.+|++|+=.|.|+ |.+++-+++..|. .+|+..+..++..+.++ +++....+.+ ...|..+..
T Consensus 88 ~~~gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~--~~~Dv~~~~----- 159 (256)
T COG2519 88 ARLGISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTL--KLGDVREGI----- 159 (256)
T ss_pred HHcCCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEE--Eeccccccc-----
Confidence 556789999999888765 8888889987765 47999999988776663 3555442211 112322211
Q ss_pred HcCCCccEEEEcCC-CHHHHHHHHHHhhcCCEEEEec
Q 048013 164 AMGTGIDVSFDCAG-FNKTMSTALSATRAGGKVCLVG 199 (216)
Q Consensus 164 ~~~~~~d~vi~~~g-~~~~~~~~~~~l~~~G~~v~~g 199 (216)
.+..+|++|--.. ..+.++.+.+.|+|+|+++.+.
T Consensus 160 -~~~~vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y~ 195 (256)
T COG2519 160 -DEEDVDAVFLDLPDPWNVLEHVSDALKPGGVVVVYS 195 (256)
T ss_pred -cccccCEEEEcCCChHHHHHHHHHHhCCCcEEEEEc
Confidence 2347988654444 5678899999999999999886
No 345
>PRK06482 short chain dehydrogenase; Provisional
Probab=97.03 E-value=0.009 Score=47.59 Aligned_cols=80 Identities=19% Similarity=0.176 Sum_probs=51.3
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHH-cCCCE-EEeCCC-CcccHHHHHHHHHHHcCCCccEE
Q 048013 97 TNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKK-LGADN-IVKVST-NLQDIAEEVEKIQKAMGTGIDVS 172 (216)
Q Consensus 97 ~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~-~g~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~d~v 172 (216)
+++||+|+ |.+|..+++.+...|++ |++++++.++.+.+++ .+... .+..+- +.+...+.+.++.+. ..++|++
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~v 80 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDR-VAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAA-LGRIDVV 80 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHH-cCCCCEE
Confidence 57999986 99999999988888985 8888898877665543 33221 112211 122233334443322 3478999
Q ss_pred EEcCCC
Q 048013 173 FDCAGF 178 (216)
Q Consensus 173 i~~~g~ 178 (216)
|.++|.
T Consensus 81 i~~ag~ 86 (276)
T PRK06482 81 VSNAGY 86 (276)
T ss_pred EECCCC
Confidence 999874
No 346
>PRK06172 short chain dehydrogenase; Provisional
Probab=97.03 E-value=0.011 Score=46.37 Aligned_cols=82 Identities=26% Similarity=0.335 Sum_probs=52.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH----HHcCCCE-EEeCCCC-cccHHHHHHHHHHHcCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KKLGADN-IVKVSTN-LQDIAEEVEKIQKAMGT 167 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~----~~~g~~~-~~~~~~~-~~~~~~~~~~~~~~~~~ 167 (216)
.+++++|.|+ |++|..+++.+...|++ |+.++++.++.+.+ ++.+... .+..+-. .++..+.+.++.+.. .
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-g 83 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAK-VVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAY-G 83 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh-C
Confidence 4689999996 89999999988889985 88999987664432 3334322 2222221 222333334433222 4
Q ss_pred CccEEEEcCCC
Q 048013 168 GIDVSFDCAGF 178 (216)
Q Consensus 168 ~~d~vi~~~g~ 178 (216)
++|++|.+.|.
T Consensus 84 ~id~li~~ag~ 94 (253)
T PRK06172 84 RLDYAFNNAGI 94 (253)
T ss_pred CCCEEEECCCC
Confidence 68999999874
No 347
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=97.02 E-value=0.019 Score=44.30 Aligned_cols=104 Identities=21% Similarity=0.350 Sum_probs=70.4
Q ss_pred cCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChHHHHHHHH----cCCCEEEeCCCCcccHHHHHHHHHHHc
Q 048013 91 ANIGPETNVLIMGSGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKK----LGADNIVKVSTNLQDIAEEVEKIQKAM 165 (216)
Q Consensus 91 ~~~~~~~~vlv~Gag~~G~~~i~~a~~~g-~~~vv~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (216)
...+..++||=+|.+ +|..++.+|..+. -.+++.++.++++.+.+++ .|....+..-.. .+..+.+.+ ..
T Consensus 55 ~~~~~~k~iLEiGT~-~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~-gdal~~l~~---~~ 129 (219)
T COG4122 55 ARLSGPKRILEIGTA-IGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLG-GDALDVLSR---LL 129 (219)
T ss_pred HHhcCCceEEEeecc-cCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEec-CcHHHHHHh---cc
Confidence 345678889988854 3777778888765 2269999999999877754 577653221111 244444443 23
Q ss_pred CCCccEEEEcCCC---HHHHHHHHHHhhcCCEEEEec
Q 048013 166 GTGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVG 199 (216)
Q Consensus 166 ~~~~d~vi~~~g~---~~~~~~~~~~l~~~G~~v~~g 199 (216)
...||+||=-..- +..++.++++|+|+|.++.=-
T Consensus 130 ~~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~DN 166 (219)
T COG4122 130 DGSFDLVFIDADKADYPEYLERALPLLRPGGLIVADN 166 (219)
T ss_pred CCCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEee
Confidence 5689998754442 567899999999999887543
No 348
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=97.02 E-value=0.014 Score=45.82 Aligned_cols=35 Identities=29% Similarity=0.461 Sum_probs=30.8
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 048013 96 ETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDD 130 (216)
Q Consensus 96 ~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~ 130 (216)
+.+|+|.|+|++|..+++.+...|..+++.+|.+.
T Consensus 24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ 58 (240)
T TIGR02355 24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDT 58 (240)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 47899999999999999999999999888887654
No 349
>PRK07577 short chain dehydrogenase; Provisional
Probab=97.02 E-value=0.018 Score=44.52 Aligned_cols=75 Identities=16% Similarity=0.332 Sum_probs=48.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCC-CCcccHHHHHHHHHHHcCCCccEE
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVS 172 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~v 172 (216)
++++++|.|+ |++|..+++.+...|++ |+.++++.++ .... ..+..+ .+.+...+.+.++.+. .++|++
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~-v~~~~r~~~~-----~~~~-~~~~~D~~~~~~~~~~~~~~~~~--~~~d~v 72 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQ-VIGIARSAID-----DFPG-ELFACDLADIEQTAATLAQINEI--HPVDAI 72 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCE-EEEEeCCccc-----ccCc-eEEEeeCCCHHHHHHHHHHHHHh--CCCcEE
Confidence 3578999996 89999999999989985 8888887654 1111 222221 1223333444444322 368999
Q ss_pred EEcCCC
Q 048013 173 FDCAGF 178 (216)
Q Consensus 173 i~~~g~ 178 (216)
|.+.|.
T Consensus 73 i~~ag~ 78 (234)
T PRK07577 73 VNNVGI 78 (234)
T ss_pred EECCCC
Confidence 999884
No 350
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=97.01 E-value=0.0088 Score=46.70 Aligned_cols=97 Identities=21% Similarity=0.342 Sum_probs=66.4
Q ss_pred CHHHHHHHHHHHHcCCCeEEEEcCChHHH----H-HHHHcCCCEEEeCCCC-cccHHHHHHHHHHHcCCCccEEEEcCCC
Q 048013 105 GPIGLVTMLAARAFGAPRIVIVDVDDYRL----S-VAKKLGADNIVKVSTN-LQDIAEEVEKIQKAMGTGIDVSFDCAGF 178 (216)
Q Consensus 105 g~~G~~~i~~a~~~g~~~vv~~~~~~~~~----~-~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 178 (216)
+++|.++++.+...|++ |++++++.++. + ..++.+.. ++..+-. .++..+.+.++.+..++++|+++++++.
T Consensus 6 ~GiG~aia~~l~~~Ga~-V~~~~~~~~~~~~~~~~l~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~a~~ 83 (241)
T PF13561_consen 6 SGIGRAIARALAEEGAN-VILTDRNEEKLADALEELAKEYGAE-VIQCDLSDEESVEALFDEAVERFGGRIDILVNNAGI 83 (241)
T ss_dssp SHHHHHHHHHHHHTTEE-EEEEESSHHHHHHHHHHHHHHTTSE-EEESCTTSHHHHHHHHHHHHHHHCSSESEEEEEEES
T ss_pred CChHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHHHHHHcCCc-eEeecCcchHHHHHHHHHHHhhcCCCeEEEEecccc
Confidence 69999999999999995 99999998873 3 33446654 4544432 2344444555554444689999987653
Q ss_pred H-----------------------------HHHHHHHHHhhcCCEEEEeccCCC
Q 048013 179 N-----------------------------KTMSTALSATRAGGKVCLVGMGHR 203 (216)
Q Consensus 179 ~-----------------------------~~~~~~~~~l~~~G~~v~~g~~~~ 203 (216)
. ...+.+.+.|+++|+++.++....
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~ 137 (241)
T PF13561_consen 84 SPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAA 137 (241)
T ss_dssp CTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGG
T ss_pred cccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhh
Confidence 1 134677778889999998875443
No 351
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=97.01 E-value=0.034 Score=39.47 Aligned_cols=96 Identities=20% Similarity=0.286 Sum_probs=58.8
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChH-------------------HH----HHHHHcCC-CEEEeCCCCc
Q 048013 96 ETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDY-------------------RL----SVAKKLGA-DNIVKVSTNL 151 (216)
Q Consensus 96 ~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~-------------------~~----~~~~~~g~-~~~~~~~~~~ 151 (216)
..+|+|.|+|++|..++..+...|..++..+|.+.- |. +.++++.+ -.+..+.
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~--- 78 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIP--- 78 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEE---
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeee---
Confidence 468999999999999999999999988888876531 11 22233332 2222221
Q ss_pred ccH-HHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEe
Q 048013 152 QDI-AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV 198 (216)
Q Consensus 152 ~~~-~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~ 198 (216)
.++ .+...++. .++|+||+|+.+...-....+.+...+.-++.
T Consensus 79 ~~~~~~~~~~~~----~~~d~vi~~~d~~~~~~~l~~~~~~~~~p~i~ 122 (135)
T PF00899_consen 79 EKIDEENIEELL----KDYDIVIDCVDSLAARLLLNEICREYGIPFID 122 (135)
T ss_dssp SHCSHHHHHHHH----HTSSEEEEESSSHHHHHHHHHHHHHTT-EEEE
T ss_pred cccccccccccc----cCCCEEEEecCCHHHHHHHHHHHHHcCCCEEE
Confidence 122 12233321 36899999999966555566667666644433
No 352
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=97.01 E-value=0.0062 Score=48.71 Aligned_cols=84 Identities=24% Similarity=0.275 Sum_probs=55.1
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHH----cCCC--EE--EeCC-CCcccHHHHHHHHHH
Q 048013 94 GPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKK----LGAD--NI--VKVS-TNLQDIAEEVEKIQK 163 (216)
Q Consensus 94 ~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~----~g~~--~~--~~~~-~~~~~~~~~~~~~~~ 163 (216)
-.++.+||.|+ .++|.+++..+...|++ |+++++++++.+.... .+.. .+ +..+ ...++..+.+....+
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga~-v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~ 84 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGAK-VVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE 84 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence 46789999986 79999999999999995 8999999887654422 2221 11 1111 122334444444333
Q ss_pred HcCCCccEEEEcCCC
Q 048013 164 AMGTGIDVSFDCAGF 178 (216)
Q Consensus 164 ~~~~~~d~vi~~~g~ 178 (216)
...+++|+.+++.|.
T Consensus 85 ~~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 85 KFFGKIDILVNNAGA 99 (270)
T ss_pred HhCCCCCEEEEcCCc
Confidence 335689999999885
No 353
>PRK06483 dihydromonapterin reductase; Provisional
Probab=97.00 E-value=0.012 Score=45.60 Aligned_cols=80 Identities=19% Similarity=0.326 Sum_probs=51.2
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHH-HHHHHHcCCCEEEeCC-CCcccHHHHHHHHHHHcCCCccEE
Q 048013 96 ETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYR-LSVAKKLGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVS 172 (216)
Q Consensus 96 ~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~-~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~v 172 (216)
++++||.|+ |++|..+++.+...|++ |++++++.+. .+.++..+... +..+ .+.++..+.+.++.+.. .++|++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~-~~~D~~~~~~~~~~~~~~~~~~-~~id~l 78 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQP-VIVSYRTHYPAIDGLRQAGAQC-IQADFSTNAGIMAFIDELKQHT-DGLRAI 78 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHcCCEE-EEcCCCCHHHHHHHHHHHHhhC-CCccEE
Confidence 468999996 89999999999889995 8888887644 33444455332 2222 12233334444443222 369999
Q ss_pred EEcCCC
Q 048013 173 FDCAGF 178 (216)
Q Consensus 173 i~~~g~ 178 (216)
+.++|.
T Consensus 79 v~~ag~ 84 (236)
T PRK06483 79 IHNASD 84 (236)
T ss_pred EECCcc
Confidence 999874
No 354
>PLN02233 ubiquinone biosynthesis methyltransferase
Probab=96.99 E-value=0.016 Score=46.06 Aligned_cols=106 Identities=18% Similarity=0.201 Sum_probs=67.3
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChHHHHHHHHc-C------CCEEEeCCCCcccHHHHHHH
Q 048013 89 RRANIGPETNVLIMGSGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKKL-G------ADNIVKVSTNLQDIAEEVEK 160 (216)
Q Consensus 89 ~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~-~~vv~~~~~~~~~~~~~~~-g------~~~~~~~~~~~~~~~~~~~~ 160 (216)
+...++++++||.+|+|. |..+..+++..+. ..|+++|.+++-++.+++. . ...+..... +. .+
T Consensus 67 ~~~~~~~~~~VLDlGcGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~---d~----~~ 138 (261)
T PLN02233 67 SWSGAKMGDRVLDLCCGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEG---DA----TD 138 (261)
T ss_pred HHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEc---cc----cc
Confidence 445678899999999875 6666777776653 2699999999887776532 1 111111101 11 11
Q ss_pred HHHHcCCCccEEEEcCC-----C-HHHHHHHHHHhhcCCEEEEeccCCC
Q 048013 161 IQKAMGTGIDVSFDCAG-----F-NKTMSTALSATRAGGKVCLVGMGHR 203 (216)
Q Consensus 161 ~~~~~~~~~d~vi~~~g-----~-~~~~~~~~~~l~~~G~~v~~g~~~~ 203 (216)
+. .....||.|+...+ + ...++++.+.|+|+|++++.-+..+
T Consensus 139 lp-~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~~~~ 186 (261)
T PLN02233 139 LP-FDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDFNKS 186 (261)
T ss_pred CC-CCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcCcEEEEEECCCC
Confidence 10 12346899876433 2 3567899999999999988765443
No 355
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.99 E-value=0.062 Score=41.91 Aligned_cols=107 Identities=16% Similarity=0.187 Sum_probs=62.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcC-ChHHH----HHHHHcCCCE-EEeCCC-CcccHHHHHHHHHHHcC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDV-DDYRL----SVAKKLGADN-IVKVST-NLQDIAEEVEKIQKAMG 166 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~-~~~~~----~~~~~~g~~~-~~~~~~-~~~~~~~~~~~~~~~~~ 166 (216)
.++++||.|+ |.+|..+++.+...|++ ++...+ +.+.. ..+++.+... .+..+- +..+..+.+.++.+..
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 82 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGSL-VVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRY- 82 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHc-
Confidence 3578999996 89999999988889996 555443 32222 2223333322 222221 2222333344443222
Q ss_pred CCccEEEEcCCC----------HH---------------HHHHHHHHhhcCCEEEEeccCCC
Q 048013 167 TGIDVSFDCAGF----------NK---------------TMSTALSATRAGGKVCLVGMGHR 203 (216)
Q Consensus 167 ~~~d~vi~~~g~----------~~---------------~~~~~~~~l~~~G~~v~~g~~~~ 203 (216)
.++|++|.++|. .+ ..+.+.+.++..|+++.++....
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~ 144 (252)
T PRK06077 83 GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG 144 (252)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc
Confidence 479999999983 11 13455666677889998886443
No 356
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.99 E-value=0.011 Score=46.76 Aligned_cols=82 Identities=22% Similarity=0.292 Sum_probs=49.9
Q ss_pred CCCEEEEEcC---CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHH----cCCCEEEeCC-CCcccHHHHHHHHHHHcC
Q 048013 95 PETNVLIMGS---GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKK----LGADNIVKVS-TNLQDIAEEVEKIQKAMG 166 (216)
Q Consensus 95 ~~~~vlv~Ga---g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~----~g~~~~~~~~-~~~~~~~~~~~~~~~~~~ 166 (216)
++++++|.|+ +++|.++++.+...|++ |+...+++...+.+++ .+....+..| .+.++..+.+.++.+..
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~- 82 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGAE-LAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHW- 82 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCCE-EEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHh-
Confidence 5788999983 48999999999889995 7776655432233322 3432222222 22233444444444333
Q ss_pred CCccEEEEcCCC
Q 048013 167 TGIDVSFDCAGF 178 (216)
Q Consensus 167 ~~~d~vi~~~g~ 178 (216)
.++|++++++|.
T Consensus 83 g~iD~lVnnAG~ 94 (261)
T PRK08690 83 DGLDGLVHSIGF 94 (261)
T ss_pred CCCcEEEECCcc
Confidence 479999999874
No 357
>PRK05717 oxidoreductase; Validated
Probab=96.99 E-value=0.013 Score=46.07 Aligned_cols=82 Identities=24% Similarity=0.270 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHH-HHHcCCCE-EEeCCC-CcccHHHHHHHHHHHcCCCcc
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV-AKKLGADN-IVKVST-NLQDIAEEVEKIQKAMGTGID 170 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~-~~~~g~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~d 170 (216)
.+++++|+|+ |++|..++..+...|++ |+.++++.++.+. .++++... .+..+- +..+..+.+.++.+.. +++|
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g~id 86 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGWQ-VVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQF-GRLD 86 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCE-EEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHh-CCCC
Confidence 5688999996 99999999999889985 8888887665443 34444322 222221 1222333344443322 3699
Q ss_pred EEEEcCCC
Q 048013 171 VSFDCAGF 178 (216)
Q Consensus 171 ~vi~~~g~ 178 (216)
++|.+.|.
T Consensus 87 ~li~~ag~ 94 (255)
T PRK05717 87 ALVCNAAI 94 (255)
T ss_pred EEEECCCc
Confidence 99998884
No 358
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=96.98 E-value=0.052 Score=42.79 Aligned_cols=82 Identities=23% Similarity=0.236 Sum_probs=48.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCC-hHHHHH----HHHcCCCE-EEeCC-CCcccHHHHHHHHHHHcC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVD-DYRLSV----AKKLGADN-IVKVS-TNLQDIAEEVEKIQKAMG 166 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~-~~~~~~----~~~~g~~~-~~~~~-~~~~~~~~~~~~~~~~~~ 166 (216)
.+++++|+|+ |++|..+++.+...|++ ++++.++ ++..+. ++..+... .+..+ .+.++..+.+.++.+..
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~-vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~- 83 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKAK-VVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEF- 83 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc-
Confidence 5789999986 89999999999999985 6666553 333222 22233321 12111 12223333333433222
Q ss_pred CCccEEEEcCCC
Q 048013 167 TGIDVSFDCAGF 178 (216)
Q Consensus 167 ~~~d~vi~~~g~ 178 (216)
.++|+++.+.|.
T Consensus 84 g~id~lv~~ag~ 95 (261)
T PRK08936 84 GTLDVMINNAGI 95 (261)
T ss_pred CCCCEEEECCCC
Confidence 479999999884
No 359
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=96.97 E-value=0.016 Score=48.31 Aligned_cols=36 Identities=28% Similarity=0.475 Sum_probs=31.9
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 048013 95 PETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDD 130 (216)
Q Consensus 95 ~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~ 130 (216)
...+|+|+|+|++|..+++.+...|..++..+|.+.
T Consensus 27 ~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ 62 (355)
T PRK05597 27 FDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT 62 (355)
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 447899999999999999999999999999988764
No 360
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=96.97 E-value=0.012 Score=46.84 Aligned_cols=81 Identities=19% Similarity=0.247 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HH---cCCCE-EEeCCCCc-ccHHHHHHHHHHHcCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KK---LGADN-IVKVSTNL-QDIAEEVEKIQKAMGT 167 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~---~g~~~-~~~~~~~~-~~~~~~~~~~~~~~~~ 167 (216)
.+++++|.|+ |++|..+++.+...|++ |++++++.++.+.+ ++ .+... .+..+-.+ ++..+.+.++.+. -+
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~g 86 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAK-VAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILED-FG 86 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence 4688999986 89999999999999995 88888887655433 22 23221 22222211 2233333333322 24
Q ss_pred CccEEEEcCC
Q 048013 168 GIDVSFDCAG 177 (216)
Q Consensus 168 ~~d~vi~~~g 177 (216)
++|++|.++|
T Consensus 87 ~id~li~~ag 96 (278)
T PRK08277 87 PCDILINGAG 96 (278)
T ss_pred CCCEEEECCC
Confidence 7999999987
No 361
>PRK06138 short chain dehydrogenase; Provisional
Probab=96.97 E-value=0.013 Score=45.79 Aligned_cols=82 Identities=20% Similarity=0.232 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HHc--CCC-EEEeCCCC-cccHHHHHHHHHHHcCCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KKL--GAD-NIVKVSTN-LQDIAEEVEKIQKAMGTG 168 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~~--g~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~ 168 (216)
++++++|+|+ |++|..+++.+...|++ |+.+.++.++.+.. +++ +.. ..+..+-. .+...+.+.++.+.. .+
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~-~~ 81 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGAR-VVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARW-GR 81 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCe-EEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-CC
Confidence 4678999996 99999999988888985 88888887655433 222 222 12222222 223333444443322 47
Q ss_pred ccEEEEcCCC
Q 048013 169 IDVSFDCAGF 178 (216)
Q Consensus 169 ~d~vi~~~g~ 178 (216)
+|++|.+.+.
T Consensus 82 id~vi~~ag~ 91 (252)
T PRK06138 82 LDVLVNNAGF 91 (252)
T ss_pred CCEEEECCCC
Confidence 9999999984
No 362
>PLN02928 oxidoreductase family protein
Probab=96.97 E-value=0.0099 Score=49.32 Aligned_cols=95 Identities=20% Similarity=0.286 Sum_probs=59.6
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCC-----CEEEeCCCCcccHHHHHHHHHHHcCCCc
Q 048013 95 PETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGA-----DNIVKVSTNLQDIAEEVEKIQKAMGTGI 169 (216)
Q Consensus 95 ~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (216)
.|+++.|+|.|.+|..+++.++.+|++ |++.+++..+.. ...++. ...........+ +.++. ...
T Consensus 158 ~gktvGIiG~G~IG~~vA~~l~afG~~-V~~~dr~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----L~ell----~~a 227 (347)
T PLN02928 158 FGKTVFILGYGAIGIELAKRLRPFGVK-LLATRRSWTSEP-EDGLLIPNGDVDDLVDEKGGHED----IYEFA----GEA 227 (347)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhCCCE-EEEECCCCChhh-hhhhccccccccccccccCcccC----HHHHH----hhC
Confidence 578999999999999999999999995 999987633211 111110 000000000112 22322 247
Q ss_pred cEEEEcCCCHHH-----HHHHHHHhhcCCEEEEec
Q 048013 170 DVSFDCAGFNKT-----MSTALSATRAGGKVCLVG 199 (216)
Q Consensus 170 d~vi~~~g~~~~-----~~~~~~~l~~~G~~v~~g 199 (216)
|+|+.++..... -...+..|+++..+|.+|
T Consensus 228 DiVvl~lPlt~~T~~li~~~~l~~Mk~ga~lINva 262 (347)
T PLN02928 228 DIVVLCCTLTKETAGIVNDEFLSSMKKGALLVNIA 262 (347)
T ss_pred CEEEECCCCChHhhcccCHHHHhcCCCCeEEEECC
Confidence 999988874221 156778889998888886
No 363
>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase.
Probab=96.96 E-value=0.035 Score=44.29 Aligned_cols=100 Identities=21% Similarity=0.252 Sum_probs=62.2
Q ss_pred HcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChHHHHHH----HHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 048013 90 RANIGPETNVLIMGSGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVA----KKLGADNIVKVSTNLQDIAEEVEKIQKA 164 (216)
Q Consensus 90 ~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g-~~~vv~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 164 (216)
...++++++||-.|+|+ |..++.++..++ ...|+++|.++++.+.+ +.++...+..+.. |..+ +..
T Consensus 66 ~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~~---D~~~-~~~---- 136 (264)
T TIGR00446 66 ALEPDPPERVLDMAAAP-GGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGVLNVAVTNF---DGRV-FGA---- 136 (264)
T ss_pred HhCCCCcCEEEEECCCc-hHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEecC---CHHH-hhh----
Confidence 34578999999998765 545555565553 22699999999987665 4466654333222 2211 111
Q ss_pred cCCCccEEEE---cCCC-------------------------HHHHHHHHHHhhcCCEEEEe
Q 048013 165 MGTGIDVSFD---CAGF-------------------------NKTMSTALSATRAGGKVCLV 198 (216)
Q Consensus 165 ~~~~~d~vi~---~~g~-------------------------~~~~~~~~~~l~~~G~~v~~ 198 (216)
....||.|+- |+|. .+.+..+++.|+|+|+++..
T Consensus 137 ~~~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpgG~lvYs 198 (264)
T TIGR00446 137 AVPKFDAILLDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPGGVLVYS 198 (264)
T ss_pred hccCCCEEEEcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 1235999875 3332 12567788899999988744
No 364
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.96 E-value=0.018 Score=42.23 Aligned_cols=84 Identities=13% Similarity=0.072 Sum_probs=52.4
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEE
Q 048013 95 PETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 174 (216)
Q Consensus 95 ~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 174 (216)
.+++|+|+|+|.+|..-++.+...|++ |++++ ++..+.+++++.-.... +.+ ++ ..-.++|+||-
T Consensus 12 ~~~~vlVvGGG~va~rka~~Ll~~ga~-V~VIs--p~~~~~l~~l~~i~~~~-----~~~----~~---~dl~~a~lVia 76 (157)
T PRK06719 12 HNKVVVIIGGGKIAYRKASGLKDTGAF-VTVVS--PEICKEMKELPYITWKQ-----KTF----SN---DDIKDAHLIYA 76 (157)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEc--CccCHHHHhccCcEEEe-----ccc----Ch---hcCCCceEEEE
Confidence 578999999999999999988889996 66664 33333344444222111 111 11 11246899999
Q ss_pred cCCCHHHHHHHHHHhhcCC
Q 048013 175 CAGFNKTMSTALSATRAGG 193 (216)
Q Consensus 175 ~~g~~~~~~~~~~~l~~~G 193 (216)
++++++.-.......+..+
T Consensus 77 aT~d~e~N~~i~~~a~~~~ 95 (157)
T PRK06719 77 ATNQHAVNMMVKQAAHDFQ 95 (157)
T ss_pred CCCCHHHHHHHHHHHHHCC
Confidence 9999665445555555544
No 365
>PRK07890 short chain dehydrogenase; Provisional
Probab=96.96 E-value=0.013 Score=46.02 Aligned_cols=82 Identities=18% Similarity=0.161 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHH-Hc---CCC-EEEeCCC-CcccHHHHHHHHHHHcCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-KL---GAD-NIVKVST-NLQDIAEEVEKIQKAMGT 167 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~-~~---g~~-~~~~~~~-~~~~~~~~~~~~~~~~~~ 167 (216)
++++++|.|+ |++|..+++.+...|++ |+++++++++.+.+. ++ +.. ..+..+- +.++....+.++.+.. .
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g 81 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGAD-VVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERF-G 81 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHc-C
Confidence 5688999996 89999999999999995 889988887654432 22 322 1222221 2223333344433222 4
Q ss_pred CccEEEEcCCC
Q 048013 168 GIDVSFDCAGF 178 (216)
Q Consensus 168 ~~d~vi~~~g~ 178 (216)
.+|++|.+.|.
T Consensus 82 ~~d~vi~~ag~ 92 (258)
T PRK07890 82 RVDALVNNAFR 92 (258)
T ss_pred CccEEEECCcc
Confidence 68999999874
No 366
>PRK08317 hypothetical protein; Provisional
Probab=96.96 E-value=0.024 Score=43.88 Aligned_cols=103 Identities=24% Similarity=0.322 Sum_probs=67.4
Q ss_pred HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChHHHHHHHHc--C-CCEEEeCCCCcccHHHHHHHHHH
Q 048013 88 CRRANIGPETNVLIMGSGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKKL--G-ADNIVKVSTNLQDIAEEVEKIQK 163 (216)
Q Consensus 88 l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g-~~~vv~~~~~~~~~~~~~~~--g-~~~~~~~~~~~~~~~~~~~~~~~ 163 (216)
++...+.++++||.+|+|. |..+..++...+ ...++++|.+++..+.+++. . ...+..... +. .+..
T Consensus 12 ~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~---d~----~~~~- 82 (241)
T PRK08317 12 FELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRG---DA----DGLP- 82 (241)
T ss_pred HHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEec---cc----ccCC-
Confidence 4567788999999999876 778888888763 23699999999887777654 1 111111101 11 0000
Q ss_pred HcCCCccEEEEcC-----CC-HHHHHHHHHHhhcCCEEEEec
Q 048013 164 AMGTGIDVSFDCA-----GF-NKTMSTALSATRAGGKVCLVG 199 (216)
Q Consensus 164 ~~~~~~d~vi~~~-----g~-~~~~~~~~~~l~~~G~~v~~g 199 (216)
.....+|+|+..- .+ ...++.+.+.|+|+|.+++..
T Consensus 83 ~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 124 (241)
T PRK08317 83 FPDGSFDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLD 124 (241)
T ss_pred CCCCCceEEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEe
Confidence 1234689887632 22 346788999999999998765
No 367
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=96.95 E-value=0.048 Score=45.67 Aligned_cols=83 Identities=18% Similarity=0.126 Sum_probs=49.9
Q ss_pred CCCCEEEEEcC-CHHHHH--HHHHHHHcCCCeEEEEcCCh---H-------------HHHHHHHcCCCE-EEeCC-CCcc
Q 048013 94 GPETNVLIMGS-GPIGLV--TMLAARAFGAPRIVIVDVDD---Y-------------RLSVAKKLGADN-IVKVS-TNLQ 152 (216)
Q Consensus 94 ~~~~~vlv~Ga-g~~G~~--~i~~a~~~g~~~vv~~~~~~---~-------------~~~~~~~~g~~~-~~~~~-~~~~ 152 (216)
..++++||+|+ +++|++ +++.+ ..|++ +++++... + -.+.+++.|... .+..+ .+++
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~-Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E 116 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGAD-TLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDE 116 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCe-EEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHH
Confidence 44689999995 899999 56666 78996 66665322 1 122445566542 22222 2223
Q ss_pred cHHHHHHHHHHHcCCCccEEEEcCCCH
Q 048013 153 DIAEEVEKIQKAMGTGIDVSFDCAGFN 179 (216)
Q Consensus 153 ~~~~~~~~~~~~~~~~~d~vi~~~g~~ 179 (216)
...+.+.++.+.. +++|+++.+++.+
T Consensus 117 ~v~~lie~I~e~~-G~IDiLVnSaA~~ 142 (398)
T PRK13656 117 IKQKVIELIKQDL-GQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHHhc-CCCCEEEECCccC
Confidence 3444455554434 4699999988863
No 368
>PRK05875 short chain dehydrogenase; Provisional
Probab=96.95 E-value=0.014 Score=46.37 Aligned_cols=81 Identities=20% Similarity=0.288 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HHc---C--CC-EEEeCCC-CcccHHHHHHHHHHHc
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KKL---G--AD-NIVKVST-NLQDIAEEVEKIQKAM 165 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~~---g--~~-~~~~~~~-~~~~~~~~~~~~~~~~ 165 (216)
+++++||.|+ |++|..+++.+...|++ |+.++++.++.+.. +++ + .. ..+..+- +.++..+.+.+..+.
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~- 83 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAA-VMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW- 83 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH-
Confidence 4689999996 89999999999999995 88888887664432 222 1 11 1221221 122233333333322
Q ss_pred CCCccEEEEcCC
Q 048013 166 GTGIDVSFDCAG 177 (216)
Q Consensus 166 ~~~~d~vi~~~g 177 (216)
..++|++|.++|
T Consensus 84 ~~~~d~li~~ag 95 (276)
T PRK05875 84 HGRLHGVVHCAG 95 (276)
T ss_pred cCCCCEEEECCC
Confidence 347899999987
No 369
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=96.95 E-value=0.026 Score=42.72 Aligned_cols=100 Identities=25% Similarity=0.265 Sum_probs=57.5
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HHc----CCCEEEeCCCCcccHHHHHHHHHHHcCC
Q 048013 94 GPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KKL----GADNIVKVSTNLQDIAEEVEKIQKAMGT 167 (216)
Q Consensus 94 ~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (216)
.++.+++|+|+ |++|..++..+...|. +|++++++.++.+.+ +++ +... ...+. .+.. .+.+.. .
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~-~~~~~--~~~~-~~~~~~----~ 96 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGV-GAVET--SDDA-ARAAAI----K 96 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcE-EEeeC--CCHH-HHHHHH----h
Confidence 35788999996 9999998888888887 588888988776544 223 2221 11111 1211 122221 3
Q ss_pred CccEEEEcCCCHHHHHHHHH-HhhcCCEEEEeccCC
Q 048013 168 GIDVSFDCAGFNKTMSTALS-ATRAGGKVCLVGMGH 202 (216)
Q Consensus 168 ~~d~vi~~~g~~~~~~~~~~-~l~~~G~~v~~g~~~ 202 (216)
++|+||.+++.......... ..+++-.++.+..+.
T Consensus 97 ~~diVi~at~~g~~~~~~~~~~~~~~~vv~D~~~~~ 132 (194)
T cd01078 97 GADVVFAAGAAGVELLEKLAWAPKPLAVAADVNAVP 132 (194)
T ss_pred cCCEEEECCCCCceechhhhcccCceeEEEEccCCC
Confidence 68999998886332111111 223333466665443
No 370
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=96.95 E-value=0.045 Score=42.52 Aligned_cols=80 Identities=14% Similarity=0.185 Sum_probs=47.9
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCeEEE-EcCChHHHHHH----HHcCCC-EEEeCCCC-cccHHHHHHHHHHHcCCC
Q 048013 97 TNVLIMGS-GPIGLVTMLAARAFGAPRIVI-VDVDDYRLSVA----KKLGAD-NIVKVSTN-LQDIAEEVEKIQKAMGTG 168 (216)
Q Consensus 97 ~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~-~~~~~~~~~~~----~~~g~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~ 168 (216)
+++||+|+ |++|..+++.+...|++ |++ ..++.++.+.. +..+.. ..+..+-. .+...+.+.++.+ ...+
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~-~~~~ 79 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYT-VAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQ-HDEP 79 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHH-hCCC
Confidence 47899996 99999999999889986 554 45665544322 223322 12222222 2233333444432 2457
Q ss_pred ccEEEEcCCC
Q 048013 169 IDVSFDCAGF 178 (216)
Q Consensus 169 ~d~vi~~~g~ 178 (216)
+|++|.++|.
T Consensus 80 id~vi~~ag~ 89 (247)
T PRK09730 80 LAALVNNAGI 89 (247)
T ss_pred CCEEEECCCC
Confidence 9999999985
No 371
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=96.95 E-value=0.0093 Score=47.70 Aligned_cols=97 Identities=12% Similarity=0.174 Sum_probs=61.3
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HHcCCCE-EEeCCCCcccHHHHHHHHHHHcCCCcc
Q 048013 93 IGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KKLGADN-IVKVSTNLQDIAEEVEKIQKAMGTGID 170 (216)
Q Consensus 93 ~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d 170 (216)
..++++++|+|+|++|.+++..+...|+ .+++++++.++.+.+ +++.... .... .. .+. ....+|
T Consensus 114 ~~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~-----~~----~~~---~~~~~D 180 (270)
T TIGR00507 114 LRPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAF-----SM----DEL---PLHRVD 180 (270)
T ss_pred CccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEe-----ch----hhh---cccCcc
Confidence 3457899999999999999998888898 588889988775543 4443211 1111 01 011 123589
Q ss_pred EEEEcCCCH---HH--HHHHHHHhhcCCEEEEeccCC
Q 048013 171 VSFDCAGFN---KT--MSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 171 ~vi~~~g~~---~~--~~~~~~~l~~~G~~v~~g~~~ 202 (216)
++|++++.. .. .......++++..++.+...+
T Consensus 181 ivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p 217 (270)
T TIGR00507 181 LIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYNP 217 (270)
T ss_pred EEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccCC
Confidence 999999862 11 011234577777888876544
No 372
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=96.95 E-value=0.015 Score=45.41 Aligned_cols=81 Identities=19% Similarity=0.262 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHH----HcCCC-EEEeCCCC-cccHHHHHHHHHHHcCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK----KLGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT 167 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~----~~g~~-~~~~~~~~-~~~~~~~~~~~~~~~~~ 167 (216)
+++++||+|+ |.+|..+++.+...|++ |+.++++.++.+.+. +.+.. ..+..+-. .+...+.+.++.+. -.
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-~~ 79 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAK-VAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQA-LG 79 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence 4688999996 89999999999989995 888888876654432 22322 22222221 22233334444322 24
Q ss_pred CccEEEEcCC
Q 048013 168 GIDVSFDCAG 177 (216)
Q Consensus 168 ~~d~vi~~~g 177 (216)
++|++|.+++
T Consensus 80 ~~d~vi~~ag 89 (250)
T TIGR03206 80 PVDVLVNNAG 89 (250)
T ss_pred CCCEEEECCC
Confidence 7899999997
No 373
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.94 E-value=0.0069 Score=52.61 Aligned_cols=73 Identities=25% Similarity=0.409 Sum_probs=52.8
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEE
Q 048013 93 IGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 172 (216)
Q Consensus 93 ~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 172 (216)
+.++++|+|+|.|.+|++++++++..|++ |++.|.+....+.++++|.... .. .+ . ...+ ..+|+|
T Consensus 9 ~~~~~~v~V~G~G~sG~aa~~~L~~~G~~-v~~~D~~~~~~~~l~~~g~~~~-~~-~~---~---~~~l-----~~~D~V 74 (488)
T PRK03369 9 LLPGAPVLVAGAGVTGRAVLAALTRFGAR-PTVCDDDPDALRPHAERGVATV-ST-SD---A---VQQI-----ADYALV 74 (488)
T ss_pred ccCCCeEEEEcCCHHHHHHHHHHHHCCCE-EEEEcCCHHHHHHHHhCCCEEE-cC-cc---h---HhHh-----hcCCEE
Confidence 45788999999999999999999999995 8889977666666677776432 21 11 1 1111 247999
Q ss_pred EEcCCCH
Q 048013 173 FDCAGFN 179 (216)
Q Consensus 173 i~~~g~~ 179 (216)
+.+.|-+
T Consensus 75 V~SpGi~ 81 (488)
T PRK03369 75 VTSPGFR 81 (488)
T ss_pred EECCCCC
Confidence 9998863
No 374
>PRK03612 spermidine synthase; Provisional
Probab=96.94 E-value=0.012 Score=51.64 Aligned_cols=98 Identities=15% Similarity=0.135 Sum_probs=63.3
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcC-C----------CEEEeCCCCcccHHHHHHHHH
Q 048013 94 GPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLG-A----------DNIVKVSTNLQDIAEEVEKIQ 162 (216)
Q Consensus 94 ~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g-~----------~~~~~~~~~~~~~~~~~~~~~ 162 (216)
+++++||++|+|. |..+..+++.....+++.++.+++-.+.+++.. . ..+.. ...|..+.+++
T Consensus 296 ~~~~rVL~IG~G~-G~~~~~ll~~~~v~~v~~VEid~~vi~~ar~~~~l~~~~~~~~~dprv~v---i~~Da~~~l~~-- 369 (521)
T PRK03612 296 ARPRRVLVLGGGD-GLALREVLKYPDVEQVTLVDLDPAMTELARTSPALRALNGGALDDPRVTV---VNDDAFNWLRK-- 369 (521)
T ss_pred CCCCeEEEEcCCc-cHHHHHHHhCCCcCeEEEEECCHHHHHHHHhCCcchhhhccccCCCceEE---EEChHHHHHHh--
Confidence 5678999998764 556666666544357999999999988887621 1 11111 11233333322
Q ss_pred HHcCCCccEEEEcCCCH-----------HHHHHHHHHhhcCCEEEEec
Q 048013 163 KAMGTGIDVSFDCAGFN-----------KTMSTALSATRAGGKVCLVG 199 (216)
Q Consensus 163 ~~~~~~~d~vi~~~g~~-----------~~~~~~~~~l~~~G~~v~~g 199 (216)
..+.+|+|+.....+ +.++.+.+.|+|+|+++.-.
T Consensus 370 --~~~~fDvIi~D~~~~~~~~~~~L~t~ef~~~~~~~L~pgG~lv~~~ 415 (521)
T PRK03612 370 --LAEKFDVIIVDLPDPSNPALGKLYSVEFYRLLKRRLAPDGLLVVQS 415 (521)
T ss_pred --CCCCCCEEEEeCCCCCCcchhccchHHHHHHHHHhcCCCeEEEEec
Confidence 346899988765431 35678889999999998654
No 375
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=96.94 E-value=0.011 Score=46.42 Aligned_cols=82 Identities=17% Similarity=0.253 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChH--HHHHHHHcCCCE-EEeCCC-CcccHHHHHHHHHHHcCCCc
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDY--RLSVAKKLGADN-IVKVST-NLQDIAEEVEKIQKAMGTGI 169 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~--~~~~~~~~g~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~ 169 (216)
.+++++|.|+ |++|.++++.+...|++ |+.+++++. ..+.+++.+... .+..+- +.++..+.+.++.+.. .++
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~-vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~~ 86 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGCD-IVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEF-GHI 86 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh-CCC
Confidence 4689999996 89999999999999995 777766532 223334444321 122221 2233444455544333 479
Q ss_pred cEEEEcCCC
Q 048013 170 DVSFDCAGF 178 (216)
Q Consensus 170 d~vi~~~g~ 178 (216)
|++|+++|.
T Consensus 87 D~li~~Ag~ 95 (253)
T PRK08993 87 DILVNNAGL 95 (253)
T ss_pred CEEEECCCC
Confidence 999999984
No 376
>PRK08226 short chain dehydrogenase; Provisional
Probab=96.94 E-value=0.016 Score=45.79 Aligned_cols=82 Identities=20% Similarity=0.278 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHH---cCCCE-EEeCCC-CcccHHHHHHHHHHHcCCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKK---LGADN-IVKVST-NLQDIAEEVEKIQKAMGTG 168 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~---~g~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~ 168 (216)
++++++|+|+ |++|..+++.+...|++ |+.++++++..+..++ .+... .+..+- +.++..+.+.++.+. ..+
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~~~ 82 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGAN-LILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEK-EGR 82 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH-cCC
Confidence 4688999986 89999999999999995 8888888754443333 23221 122111 122333334444322 346
Q ss_pred ccEEEEcCCC
Q 048013 169 IDVSFDCAGF 178 (216)
Q Consensus 169 ~d~vi~~~g~ 178 (216)
+|++|.+.|.
T Consensus 83 id~vi~~ag~ 92 (263)
T PRK08226 83 IDILVNNAGV 92 (263)
T ss_pred CCEEEECCCc
Confidence 9999999883
No 377
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=96.93 E-value=0.023 Score=44.84 Aligned_cols=35 Identities=29% Similarity=0.449 Sum_probs=30.8
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 048013 95 PETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVD 129 (216)
Q Consensus 95 ~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~ 129 (216)
...+|+|+|+|++|..+++.+...|..++.++|.+
T Consensus 31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D 65 (245)
T PRK05690 31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFD 65 (245)
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 45789999999999999999999999888888655
No 378
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.93 E-value=0.015 Score=39.34 Aligned_cols=91 Identities=16% Similarity=0.246 Sum_probs=60.7
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEE
Q 048013 95 PETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 174 (216)
Q Consensus 95 ~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 174 (216)
.+++|||+|+|.+|..-++.+...|++ |++++.+. +..+ +.-.... +.+. + .-.++|+||-
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA~-v~vis~~~---~~~~--~~i~~~~-----~~~~----~----~l~~~~lV~~ 66 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGAK-VTVISPEI---EFSE--GLIQLIR-----REFE----E----DLDGADLVFA 66 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTBE-EEEEESSE---HHHH--TSCEEEE-----SS-G----G----GCTTESEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCE-EEEECCch---hhhh--hHHHHHh-----hhHH----H----HHhhheEEEe
Confidence 578999999999999999999999995 77777664 2222 2211111 1111 0 1246999999
Q ss_pred cCCCHHHHHHHHHHhhcCCEEEEeccCCCC
Q 048013 175 CAGFNKTMSTALSATRAGGKVCLVGMGHRE 204 (216)
Q Consensus 175 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~ 204 (216)
+++++..-+...+.++..|.++.+.-.++.
T Consensus 67 at~d~~~n~~i~~~a~~~~i~vn~~D~p~~ 96 (103)
T PF13241_consen 67 ATDDPELNEAIYADARARGILVNVVDDPEL 96 (103)
T ss_dssp -SS-HHHHHHHHHHHHHTTSEEEETT-CCC
T ss_pred cCCCHHHHHHHHHHHhhCCEEEEECCCcCC
Confidence 999977777888888889999888744443
No 379
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.93 E-value=0.022 Score=43.52 Aligned_cols=90 Identities=13% Similarity=0.136 Sum_probs=54.5
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh-HHH-HHHHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEE
Q 048013 95 PETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDD-YRL-SVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 172 (216)
Q Consensus 95 ~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~-~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 172 (216)
.+++|||+|+|.+|...++.+...|++ |++++.+. +.+ +.+.+ +. .... . ..+.+ . .-.++|+|
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga~-V~VIs~~~~~~l~~l~~~-~~-i~~~--~--~~~~~--~-----~l~~adlV 74 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGAH-IVVISPELTENLVKLVEE-GK-IRWK--Q--KEFEP--S-----DIVDAFLV 74 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCe-EEEEcCCCCHHHHHHHhC-CC-EEEE--e--cCCCh--h-----hcCCceEE
Confidence 578999999999999999988889985 77776542 122 22222 21 1111 1 11110 0 11368999
Q ss_pred EEcCCCHHHHHHHHHHhhcCCEEEEec
Q 048013 173 FDCAGFNKTMSTALSATRAGGKVCLVG 199 (216)
Q Consensus 173 i~~~g~~~~~~~~~~~l~~~G~~v~~g 199 (216)
|-++++++.-......++. +.++.+.
T Consensus 75 iaaT~d~elN~~i~~~a~~-~~lvn~~ 100 (202)
T PRK06718 75 IAATNDPRVNEQVKEDLPE-NALFNVI 100 (202)
T ss_pred EEcCCCHHHHHHHHHHHHh-CCcEEEC
Confidence 9999996665555555544 4555554
No 380
>PRK07074 short chain dehydrogenase; Provisional
Probab=96.93 E-value=0.014 Score=45.87 Aligned_cols=81 Identities=22% Similarity=0.267 Sum_probs=51.1
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HHcCCC--EEEeCCCCc-ccHHHHHHHHHHHcCCCcc
Q 048013 96 ETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KKLGAD--NIVKVSTNL-QDIAEEVEKIQKAMGTGID 170 (216)
Q Consensus 96 ~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~~g~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~d 170 (216)
+++++|+|+ |++|..++..+...|++ |+.++++.++.+.+ +++... ..+..+-.+ +...+.+.++.+.. +++|
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~d 79 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDR-VLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAER-GPVD 79 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence 468999996 89999999988888985 88888887766543 333211 122222222 22223344433222 3699
Q ss_pred EEEEcCCC
Q 048013 171 VSFDCAGF 178 (216)
Q Consensus 171 ~vi~~~g~ 178 (216)
+++.+.|.
T Consensus 80 ~vi~~ag~ 87 (257)
T PRK07074 80 VLVANAGA 87 (257)
T ss_pred EEEECCCC
Confidence 99999974
No 381
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.93 E-value=0.017 Score=43.09 Aligned_cols=33 Identities=27% Similarity=0.348 Sum_probs=29.4
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 048013 98 NVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDD 130 (216)
Q Consensus 98 ~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~ 130 (216)
+|+|+|+|++|..+++.+...|..++..+|.+.
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 478999999999999999999998899998775
No 382
>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed
Probab=96.93 E-value=0.02 Score=43.76 Aligned_cols=99 Identities=16% Similarity=0.135 Sum_probs=63.8
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHH----cCCCEEEeCCCCcccHHHHHHHHHHHcCCCcc
Q 048013 95 PETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKK----LGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 170 (216)
Q Consensus 95 ~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 170 (216)
++.+||-+|+|. |..+..+++.....+++++|.+++..+.+++ .+...+..+. .++.+.+... .....+|
T Consensus 40 ~~~~VLDiGcGt-G~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~~~~---~d~~~~l~~~--~~~~~~D 113 (202)
T PRK00121 40 DAPIHLEIGFGK-GEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLRLLC---GDAVEVLLDM--FPDGSLD 113 (202)
T ss_pred CCCeEEEEccCC-CHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEEEEe---cCHHHHHHHH--cCccccc
Confidence 678899999875 7777777776543369999999988776643 3433322211 2331222211 1244689
Q ss_pred EEEEcCCC--------------HHHHHHHHHHhhcCCEEEEec
Q 048013 171 VSFDCAGF--------------NKTMSTALSATRAGGKVCLVG 199 (216)
Q Consensus 171 ~vi~~~g~--------------~~~~~~~~~~l~~~G~~v~~g 199 (216)
.++-.... ...++.+.+.|+|+|.+++..
T Consensus 114 ~V~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~LkpgG~l~i~~ 156 (202)
T PRK00121 114 RIYLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPGGEIHFAT 156 (202)
T ss_pred eEEEECCCCCCCccccccccCCHHHHHHHHHHcCCCCEEEEEc
Confidence 98864332 356788999999999998764
No 383
>PLN02476 O-methyltransferase
Probab=96.92 E-value=0.021 Score=45.70 Aligned_cols=105 Identities=21% Similarity=0.244 Sum_probs=68.5
Q ss_pred cCCCCCCEEEEEcCCHHHHHHHHHHHHcCCC-eEEEEcCChHHHHHH----HHcCCCEEEeCCCCcccHHHHHHHHHHHc
Q 048013 91 ANIGPETNVLIMGSGPIGLVTMLAARAFGAP-RIVIVDVDDYRLSVA----KKLGADNIVKVSTNLQDIAEEVEKIQKAM 165 (216)
Q Consensus 91 ~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~-~vv~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (216)
.+..+.++||-+|.+ +|..++.+++.++.. +++.++.+++..+.+ ++.|...-+.+ ...+..+.+.++....
T Consensus 114 ~~~~~ak~VLEIGT~-tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~l--i~GdA~e~L~~l~~~~ 190 (278)
T PLN02476 114 VQILGAERCIEVGVY-TGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNV--KHGLAAESLKSMIQNG 190 (278)
T ss_pred HHhcCCCeEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEE--EEcCHHHHHHHHHhcc
Confidence 445678999999864 266667777766422 599999999887766 44566532221 1245555555542111
Q ss_pred -CCCccEEEEcCCC---HHHHHHHHHHhhcCCEEEEe
Q 048013 166 -GTGIDVSFDCAGF---NKTMSTALSATRAGGKVCLV 198 (216)
Q Consensus 166 -~~~~d~vi~~~g~---~~~~~~~~~~l~~~G~~v~~ 198 (216)
...||.||--... ...++.+++.|+++|.++.=
T Consensus 191 ~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~D 227 (278)
T PLN02476 191 EGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVMD 227 (278)
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEEEEe
Confidence 3579998865554 34668889999999998744
No 384
>PRK07035 short chain dehydrogenase; Provisional
Probab=96.92 E-value=0.016 Score=45.48 Aligned_cols=81 Identities=14% Similarity=0.186 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HH---cCCC-EEEeCCC-CcccHHHHHHHHHHHcCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KK---LGAD-NIVKVST-NLQDIAEEVEKIQKAMGT 167 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~---~g~~-~~~~~~~-~~~~~~~~~~~~~~~~~~ 167 (216)
.+++++|.|+ |++|..+++.+...|+ +|+.++++.++.+.+ ++ .+.. ..+..+- +.++..+.+.++.+.. .
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~ 84 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERH-G 84 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence 4578999996 8999999999999999 488999887665433 22 2322 1222211 2223333444443333 3
Q ss_pred CccEEEEcCC
Q 048013 168 GIDVSFDCAG 177 (216)
Q Consensus 168 ~~d~vi~~~g 177 (216)
.+|+++.+.+
T Consensus 85 ~id~li~~ag 94 (252)
T PRK07035 85 RLDILVNNAA 94 (252)
T ss_pred CCCEEEECCC
Confidence 6999999887
No 385
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.91 E-value=0.025 Score=44.13 Aligned_cols=92 Identities=15% Similarity=0.265 Sum_probs=57.0
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChH-------------------H----HHHHHHcCCCE-EEeCCCCc
Q 048013 96 ETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDY-------------------R----LSVAKKLGADN-IVKVSTNL 151 (216)
Q Consensus 96 ~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~-------------------~----~~~~~~~g~~~-~~~~~~~~ 151 (216)
..+|+|+|+|++|..++..+...|..+++.+|.+.- | .+.++++.... +..++
T Consensus 11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~--- 87 (231)
T cd00755 11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVE--- 87 (231)
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEee---
Confidence 467999999999999999999999988988886531 1 11223333322 21111
Q ss_pred ccHH-HHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCC
Q 048013 152 QDIA-EEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGG 193 (216)
Q Consensus 152 ~~~~-~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G 193 (216)
..+. +...++ ....+|+|+||+.+...-..+.+.+...+
T Consensus 88 ~~i~~~~~~~l---~~~~~D~VvdaiD~~~~k~~L~~~c~~~~ 127 (231)
T cd00755 88 EFLTPDNSEDL---LGGDPDFVVDAIDSIRAKVALIAYCRKRK 127 (231)
T ss_pred eecCHhHHHHH---hcCCCCEEEEcCCCHHHHHHHHHHHHHhC
Confidence 1111 112222 23469999999998655445566666555
No 386
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.91 E-value=0.043 Score=43.29 Aligned_cols=104 Identities=19% Similarity=0.343 Sum_probs=63.2
Q ss_pred CCCEEEEEcC---CHHHHHHHHHHHHcCCCeEEEEcCCh--HHHHH-HHHcCCC-EEEeCC-CCcccHHHHHHHHHHHcC
Q 048013 95 PETNVLIMGS---GPIGLVTMLAARAFGAPRIVIVDVDD--YRLSV-AKKLGAD-NIVKVS-TNLQDIAEEVEKIQKAMG 166 (216)
Q Consensus 95 ~~~~vlv~Ga---g~~G~~~i~~a~~~g~~~vv~~~~~~--~~~~~-~~~~g~~-~~~~~~-~~~~~~~~~~~~~~~~~~ 166 (216)
.+++++|+|+ +++|.++++.+...|++ |+.++++. +..+. .++++.. ..+..| .+.++..+.+.++.+..
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~-v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~- 83 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAE-VVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHV- 83 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCE-EEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHc-
Confidence 5688999985 69999999988889995 88887653 33333 3344432 122222 12223333444443322
Q ss_pred CCccEEEEcCCCH--------------H---------------HHHHHHHHhhcCCEEEEecc
Q 048013 167 TGIDVSFDCAGFN--------------K---------------TMSTALSATRAGGKVCLVGM 200 (216)
Q Consensus 167 ~~~d~vi~~~g~~--------------~---------------~~~~~~~~l~~~G~~v~~g~ 200 (216)
.++|++++++|.. + ..+.+++.|+.+|+++.++.
T Consensus 84 g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~ 146 (256)
T PRK07889 84 DGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDF 146 (256)
T ss_pred CCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEee
Confidence 4799999988741 0 12445666777788887764
No 387
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=96.90 E-value=0.031 Score=44.15 Aligned_cols=78 Identities=21% Similarity=0.251 Sum_probs=48.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCC-CcccHHHHHHHHHHHcCCCccEE
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS 172 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~v 172 (216)
.++++||.|+ |++|.++++.+...|++ |+.++++.++.+. .... .+..+- +.++..+.+.++.+.. .++|++
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~~-v~~~~~~~~~~~~---~~~~-~~~~D~~~~~~~~~~~~~~~~~~-g~id~l 81 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGAN-VVNADIHGGDGQH---ENYQ-FVPTDVSSAEEVNHTVAEIIEKF-GRIDGL 81 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCcccccc---CceE-EEEccCCCHHHHHHHHHHHHHHc-CCCCEE
Confidence 4688999996 89999999999999995 8888877654321 1111 111111 2233334444443222 479999
Q ss_pred EEcCCC
Q 048013 173 FDCAGF 178 (216)
Q Consensus 173 i~~~g~ 178 (216)
|.++|.
T Consensus 82 i~~Ag~ 87 (266)
T PRK06171 82 VNNAGI 87 (266)
T ss_pred EECCcc
Confidence 998873
No 388
>PRK06914 short chain dehydrogenase; Provisional
Probab=96.90 E-value=0.011 Score=47.09 Aligned_cols=80 Identities=16% Similarity=0.256 Sum_probs=50.5
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHH----HcCC--C-EEEeCCC-CcccHHHHHHHHHHHcC
Q 048013 96 ETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK----KLGA--D-NIVKVST-NLQDIAEEVEKIQKAMG 166 (216)
Q Consensus 96 ~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~----~~g~--~-~~~~~~~-~~~~~~~~~~~~~~~~~ 166 (216)
++++||+|+ |.+|..+++.+...|++ |++++++.++.+... ..+. . ..+..+- +.+++.+ +.++.+. .
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~-~ 79 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGYL-VIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKE-I 79 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCE-EEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHh-c
Confidence 568999996 89999999998889995 888888876654432 2221 1 1222222 2223333 4444322 2
Q ss_pred CCccEEEEcCCC
Q 048013 167 TGIDVSFDCAGF 178 (216)
Q Consensus 167 ~~~d~vi~~~g~ 178 (216)
.++|+++.++|.
T Consensus 80 ~~id~vv~~ag~ 91 (280)
T PRK06914 80 GRIDLLVNNAGY 91 (280)
T ss_pred CCeeEEEECCcc
Confidence 478999999874
No 389
>PRK08328 hypothetical protein; Provisional
Probab=96.90 E-value=0.022 Score=44.50 Aligned_cols=35 Identities=26% Similarity=0.435 Sum_probs=30.8
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 048013 95 PETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVD 129 (216)
Q Consensus 95 ~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~ 129 (216)
.+.+|+|+|+|++|..+++.+...|..++..+|.+
T Consensus 26 ~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D 60 (231)
T PRK08328 26 KKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQ 60 (231)
T ss_pred hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 45779999999999999999999999988888754
No 390
>PRK13243 glyoxylate reductase; Reviewed
Probab=96.89 E-value=0.012 Score=48.46 Aligned_cols=87 Identities=20% Similarity=0.233 Sum_probs=58.1
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEE
Q 048013 95 PETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 174 (216)
Q Consensus 95 ~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 174 (216)
.|++|.|+|.|.+|..+++.++.+|++ |++.+++.+.. ..+..+... .++ .++. ...|+|+-
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~~-V~~~d~~~~~~-~~~~~~~~~--------~~l----~ell----~~aDiV~l 210 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGMR-ILYYSRTRKPE-AEKELGAEY--------RPL----EELL----RESDFVSL 210 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCE-EEEECCCCChh-hHHHcCCEe--------cCH----HHHH----hhCCEEEE
Confidence 578999999999999999999999995 88998875432 223333311 111 2221 13688888
Q ss_pred cCCCHHH----H-HHHHHHhhcCCEEEEec
Q 048013 175 CAGFNKT----M-STALSATRAGGKVCLVG 199 (216)
Q Consensus 175 ~~g~~~~----~-~~~~~~l~~~G~~v~~g 199 (216)
++..... + ...+..|+++..++.++
T Consensus 211 ~lP~t~~T~~~i~~~~~~~mk~ga~lIN~a 240 (333)
T PRK13243 211 HVPLTKETYHMINEERLKLMKPTAILVNTA 240 (333)
T ss_pred eCCCChHHhhccCHHHHhcCCCCeEEEECc
Confidence 7775221 1 45667778888877776
No 391
>PRK06181 short chain dehydrogenase; Provisional
Probab=96.89 E-value=0.019 Score=45.32 Aligned_cols=81 Identities=22% Similarity=0.321 Sum_probs=50.4
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH----HHcCCCE-EEeCCC-CcccHHHHHHHHHHHcCCC
Q 048013 96 ETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KKLGADN-IVKVST-NLQDIAEEVEKIQKAMGTG 168 (216)
Q Consensus 96 ~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~----~~~g~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~ 168 (216)
++++||+|+ |++|..+++.+...|++ |+++++++++.+.+ +..+... .+..+- +.+...+.+.++.+. ..+
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~-Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~ 78 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQ-LVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVAR-FGG 78 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cCC
Confidence 357899996 99999999999889984 88898887664433 2233322 122211 122233333443322 246
Q ss_pred ccEEEEcCCC
Q 048013 169 IDVSFDCAGF 178 (216)
Q Consensus 169 ~d~vi~~~g~ 178 (216)
+|++|.++|.
T Consensus 79 id~vi~~ag~ 88 (263)
T PRK06181 79 IDILVNNAGI 88 (263)
T ss_pred CCEEEECCCc
Confidence 9999999874
No 392
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=96.88 E-value=0.052 Score=37.21 Aligned_cols=93 Identities=17% Similarity=0.119 Sum_probs=62.1
Q ss_pred EEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEEcCCC
Q 048013 99 VLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGF 178 (216)
Q Consensus 99 vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 178 (216)
|+|.|.|.+|..+++.++..+. .+++++.++++.+.+++.+...+ .-+..+. +.+++. .-..++.++-++++
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~~i-~gd~~~~---~~l~~a---~i~~a~~vv~~~~~ 72 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVEVI-YGDATDP---EVLERA---GIEKADAVVILTDD 72 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSEEE-ES-TTSH---HHHHHT---TGGCESEEEEESSS
T ss_pred eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhcccccc-cccchhh---hHHhhc---CccccCEEEEccCC
Confidence 5788999999999999999665 59999999999999988885533 3222222 223332 33568999999987
Q ss_pred HHHHH---HHHHHhhcCCEEEEec
Q 048013 179 NKTMS---TALSATRAGGKVCLVG 199 (216)
Q Consensus 179 ~~~~~---~~~~~l~~~G~~v~~g 199 (216)
..... ..++.+.+..+++..-
T Consensus 73 d~~n~~~~~~~r~~~~~~~ii~~~ 96 (116)
T PF02254_consen 73 DEENLLIALLARELNPDIRIIARV 96 (116)
T ss_dssp HHHHHHHHHHHHHHTTTSEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCCeEEEEE
Confidence 44332 3334455666776543
No 393
>PRK06141 ornithine cyclodeaminase; Validated
Probab=96.86 E-value=0.033 Score=45.56 Aligned_cols=100 Identities=17% Similarity=0.160 Sum_probs=63.7
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHHH-cCCCeEEEEcCChHHHHHH-HHc---CCCEEEeCCCCcccHHHHHHHHHH
Q 048013 89 RRANIGPETNVLIMGSGPIGLVTMLAARA-FGAPRIVIVDVDDYRLSVA-KKL---GADNIVKVSTNLQDIAEEVEKIQK 163 (216)
Q Consensus 89 ~~~~~~~~~~vlv~Gag~~G~~~i~~a~~-~g~~~vv~~~~~~~~~~~~-~~~---g~~~~~~~~~~~~~~~~~~~~~~~ 163 (216)
+....+..++++|+|+|.+|...+..+.. .+.+.|.+.+++.++.+.+ +++ +.. +... .+..+.+
T Consensus 118 ~~La~~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~-~~~~----~~~~~av----- 187 (314)
T PRK06141 118 SYLARKDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFD-AEVV----TDLEAAV----- 187 (314)
T ss_pred HHhCCCCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCc-eEEe----CCHHHHH-----
Confidence 33445677899999999999998865544 6767799999998875543 444 222 1111 1221111
Q ss_pred HcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCC
Q 048013 164 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 164 ~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
...|+|+.+++....+ .--+.++|+-.+..+|...
T Consensus 188 ---~~aDIVi~aT~s~~pv-l~~~~l~~g~~i~~ig~~~ 222 (314)
T PRK06141 188 ---RQADIISCATLSTEPL-VRGEWLKPGTHLDLVGNFT 222 (314)
T ss_pred ---hcCCEEEEeeCCCCCE-ecHHHcCCCCEEEeeCCCC
Confidence 3699999999874321 1125678888777777544
No 394
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=96.86 E-value=0.022 Score=43.86 Aligned_cols=105 Identities=14% Similarity=0.166 Sum_probs=63.1
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HHcCCCEEEe-------CCCCccc-HHHHHHHHHHH
Q 048013 94 GPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KKLGADNIVK-------VSTNLQD-IAEEVEKIQKA 164 (216)
Q Consensus 94 ~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~~g~~~~~~-------~~~~~~~-~~~~~~~~~~~ 164 (216)
.++.+||+.|+|. |.-++-+|. .|++ |+++|.++.-.+.+ ++.+...... +....-. ....+.++...
T Consensus 33 ~~~~rvLd~GCG~-G~da~~LA~-~G~~-V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~ 109 (213)
T TIGR03840 33 PAGARVFVPLCGK-SLDLAWLAE-QGHR-VLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAA 109 (213)
T ss_pred CCCCeEEEeCCCc-hhHHHHHHh-CCCe-EEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCcc
Confidence 5678999999885 777777775 7996 99999999887764 3333321100 0000000 00001111000
Q ss_pred cCCCccEEEEcCCC--------HHHHHHHHHHhhcCCEEEEeccC
Q 048013 165 MGTGIDVSFDCAGF--------NKTMSTALSATRAGGKVCLVGMG 201 (216)
Q Consensus 165 ~~~~~d~vi~~~g~--------~~~~~~~~~~l~~~G~~v~~g~~ 201 (216)
....||.++|...- ...++.+.++|+|+|+++++++.
T Consensus 110 ~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~~ 154 (213)
T TIGR03840 110 DLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITLD 154 (213)
T ss_pred cCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEEE
Confidence 12368999996541 24678899999999997777653
No 395
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=96.86 E-value=0.018 Score=45.84 Aligned_cols=105 Identities=18% Similarity=0.204 Sum_probs=67.3
Q ss_pred HHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCC--CEEEeCCCCcccHHHHHHHHHH
Q 048013 86 HACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGA--DNIVKVSTNLQDIAEEVEKIQK 163 (216)
Q Consensus 86 ~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~ 163 (216)
.++...++.++.+||-+|+|. |..+..+++..++ .|+++|.+++..+.+++... ..+... ..++. +. .
T Consensus 43 ~~l~~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i~~~---~~D~~----~~-~ 112 (263)
T PTZ00098 43 KILSDIELNENSKVLDIGSGL-GGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKIEFE---ANDIL----KK-D 112 (263)
T ss_pred HHHHhCCCCCCCEEEEEcCCC-ChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCceEEE---ECCcc----cC-C
Confidence 345667789999999999864 5556666776777 59999999888777765321 111111 01111 10 0
Q ss_pred HcCCCccEEEEcC-----C--C-HHHHHHHHHHhhcCCEEEEecc
Q 048013 164 AMGTGIDVSFDCA-----G--F-NKTMSTALSATRAGGKVCLVGM 200 (216)
Q Consensus 164 ~~~~~~d~vi~~~-----g--~-~~~~~~~~~~l~~~G~~v~~g~ 200 (216)
.....||+|+..- + . ...++.+.+.|+|+|++++...
T Consensus 113 ~~~~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~ 157 (263)
T PTZ00098 113 FPENTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY 157 (263)
T ss_pred CCCCCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 1234699998621 1 1 2456788899999999998764
No 396
>PRK06197 short chain dehydrogenase; Provisional
Probab=96.85 E-value=0.016 Score=47.01 Aligned_cols=105 Identities=19% Similarity=0.252 Sum_probs=63.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HHc----CCCE--EEeCCC-CcccHHHHHHHHHHHc
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KKL----GADN--IVKVST-NLQDIAEEVEKIQKAM 165 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~~----g~~~--~~~~~~-~~~~~~~~~~~~~~~~ 165 (216)
.+++++|.|+ |++|..+++.+...|++ |+.+.++.++.+.+ +++ +... .+..+- +.++..+.+.++.+.
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~~-vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~- 92 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGAH-VVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAA- 92 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhh-
Confidence 5689999996 99999999988888995 88888887664432 221 1111 222221 122333334444322
Q ss_pred CCCccEEEEcCCCH--------H---------------HHHHHHHHhhc--CCEEEEeccC
Q 048013 166 GTGIDVSFDCAGFN--------K---------------TMSTALSATRA--GGKVCLVGMG 201 (216)
Q Consensus 166 ~~~~d~vi~~~g~~--------~---------------~~~~~~~~l~~--~G~~v~~g~~ 201 (216)
..++|++|.++|.. + ..+.+++.+.. .++++.++..
T Consensus 93 ~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~ 153 (306)
T PRK06197 93 YPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSG 153 (306)
T ss_pred CCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCH
Confidence 24699999998731 0 13445666643 4799988753
No 397
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=96.85 E-value=0.012 Score=47.50 Aligned_cols=36 Identities=14% Similarity=0.224 Sum_probs=31.2
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 048013 95 PETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDD 130 (216)
Q Consensus 95 ~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~ 130 (216)
.+++++|+|+|+.+.+++..+...|++++.+++|+.
T Consensus 123 ~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~ 158 (288)
T PRK12749 123 KGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRD 158 (288)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 567999999999999888877788998899999984
No 398
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=96.85 E-value=0.035 Score=42.37 Aligned_cols=35 Identities=26% Similarity=0.456 Sum_probs=31.3
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 048013 95 PETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVD 129 (216)
Q Consensus 95 ~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~ 129 (216)
...+|+|.|+|++|..+++.+...|...++.+|.+
T Consensus 20 ~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 20 EQATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 45779999999999999999999999779999888
No 399
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.85 E-value=0.045 Score=42.51 Aligned_cols=81 Identities=26% Similarity=0.366 Sum_probs=48.8
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEE-cCChHHHHHHH-H---cCCCE-EEeCCCCc-ccHHHHHHHHHHHcCC
Q 048013 96 ETNVLIMGS-GPIGLVTMLAARAFGAPRIVIV-DVDDYRLSVAK-K---LGADN-IVKVSTNL-QDIAEEVEKIQKAMGT 167 (216)
Q Consensus 96 ~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~-~~~~~~~~~~~-~---~g~~~-~~~~~~~~-~~~~~~~~~~~~~~~~ 167 (216)
++++||+|+ |++|..++..+...|++ ++++ +++.++.+.+. . .+... .+..+-.+ +...+.+.++.+.. .
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~~-v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~ 82 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGAK-VVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKF-G 82 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh-C
Confidence 468999986 99999999888888986 7777 88776654332 2 22222 22222211 22223333332222 3
Q ss_pred CccEEEEcCCC
Q 048013 168 GIDVSFDCAGF 178 (216)
Q Consensus 168 ~~d~vi~~~g~ 178 (216)
++|++|.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (247)
T PRK05565 83 KIDILVNNAGI 93 (247)
T ss_pred CCCEEEECCCc
Confidence 69999998874
No 400
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=96.84 E-value=0.02 Score=45.11 Aligned_cols=82 Identities=23% Similarity=0.296 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHH----HcCCCE-EEeCCC-CcccHHHHHHHHHHHcCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK----KLGADN-IVKVST-NLQDIAEEVEKIQKAMGT 167 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~----~~g~~~-~~~~~~-~~~~~~~~~~~~~~~~~~ 167 (216)
+++++||.|+ |++|..+++.+...|++ |+.++++.++.+.+. ..+... .+..+- +.++..+.+.++.+.. .
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~-~ 88 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGAR-VVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERF-G 88 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh-C
Confidence 5689999996 99999999999889994 888888877655432 222221 222221 1223333344443222 4
Q ss_pred CccEEEEcCCC
Q 048013 168 GIDVSFDCAGF 178 (216)
Q Consensus 168 ~~d~vi~~~g~ 178 (216)
++|.+|.++|.
T Consensus 89 ~id~vi~~ag~ 99 (259)
T PRK08213 89 HVDILVNNAGA 99 (259)
T ss_pred CCCEEEECCCC
Confidence 69999999874
No 401
>PRK14903 16S rRNA methyltransferase B; Provisional
Probab=96.84 E-value=0.037 Score=47.38 Aligned_cols=102 Identities=19% Similarity=0.259 Sum_probs=63.2
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChHHHHHHH----HcCCCEEEeCCCCcccHHHHHHHHHH
Q 048013 89 RRANIGPETNVLIMGSGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAK----KLGADNIVKVSTNLQDIAEEVEKIQK 163 (216)
Q Consensus 89 ~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g-~~~vv~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~ 163 (216)
...+++++++||-.|+|+ |..++.++..++ -..|+++|.++++++.++ ++|...+..... |..+ +...
T Consensus 231 ~~l~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~~~~~---Da~~-l~~~-- 303 (431)
T PRK14903 231 LLMELEPGLRVLDTCAAP-GGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIEIKIA---DAER-LTEY-- 303 (431)
T ss_pred HHhCCCCCCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEEC---chhh-hhhh--
Confidence 345678999999998765 555566666652 236999999999887664 467654322211 2211 1111
Q ss_pred HcCCCccEEEE---cCCC------H-------------------HHHHHHHHHhhcCCEEEEe
Q 048013 164 AMGTGIDVSFD---CAGF------N-------------------KTMSTALSATRAGGKVCLV 198 (216)
Q Consensus 164 ~~~~~~d~vi~---~~g~------~-------------------~~~~~~~~~l~~~G~~v~~ 198 (216)
....||.|+- |+|. + ..+..+++.|+|+|+++..
T Consensus 304 -~~~~fD~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYs 365 (431)
T PRK14903 304 -VQDTFDRILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKGGILLYS 365 (431)
T ss_pred -hhccCCEEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 1346999885 3332 1 2356788899999987643
No 402
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=96.83 E-value=0.021 Score=45.89 Aligned_cols=90 Identities=14% Similarity=0.139 Sum_probs=65.6
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHH-HHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEEcC
Q 048013 98 NVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYR-LSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 176 (216)
Q Consensus 98 ~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 176 (216)
+|.++|.|.+|.-.++-+...|+. +.+.+++.++ .+.+++.|+...-. ..+.. ...|+||-++
T Consensus 2 kIafIGLG~MG~pmA~~L~~aG~~-v~v~~r~~~ka~~~~~~~Ga~~a~s-------~~eaa--------~~aDvVitmv 65 (286)
T COG2084 2 KIAFIGLGIMGSPMAANLLKAGHE-VTVYNRTPEKAAELLAAAGATVAAS-------PAEAA--------AEADVVITML 65 (286)
T ss_pred eEEEEcCchhhHHHHHHHHHCCCE-EEEEeCChhhhhHHHHHcCCcccCC-------HHHHH--------HhCCEEEEec
Confidence 577889999999999999999985 9999999998 78888888875321 11111 2588999999
Q ss_pred CCHHHHHHHH-------HHhhcCCEEEEeccCCC
Q 048013 177 GFNKTMSTAL-------SATRAGGKVCLVGMGHR 203 (216)
Q Consensus 177 g~~~~~~~~~-------~~l~~~G~~v~~g~~~~ 203 (216)
++....+.++ ..++++..++.++...+
T Consensus 66 ~~~~~V~~V~~g~~g~~~~~~~G~i~IDmSTisp 99 (286)
T COG2084 66 PDDAAVRAVLFGENGLLEGLKPGAIVIDMSTISP 99 (286)
T ss_pred CCHHHHHHHHhCccchhhcCCCCCEEEECCCCCH
Confidence 8865554443 33457778888775443
No 403
>PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional
Probab=96.83 E-value=0.028 Score=43.22 Aligned_cols=97 Identities=13% Similarity=0.245 Sum_probs=57.2
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHH-HcCCCcc
Q 048013 93 IGPETNVLIMGSGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQK-AMGTGID 170 (216)
Q Consensus 93 ~~~~~~vlv~Gag~~G~~~i~~a~~~g~-~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d 170 (216)
++++++||-+|+|+ |..+..+++..+. ..|+++|.++. ..+..-.++. .+..+. +.+.++.+ .....+|
T Consensus 49 ~~~~~~VLDlG~Gt-G~~t~~l~~~~~~~~~V~aVDi~~~-----~~~~~v~~i~--~D~~~~-~~~~~i~~~~~~~~~D 119 (209)
T PRK11188 49 FKPGMTVVDLGAAP-GGWSQYAVTQIGDKGRVIACDILPM-----DPIVGVDFLQ--GDFRDE-LVLKALLERVGDSKVQ 119 (209)
T ss_pred CCCCCEEEEEcccC-CHHHHHHHHHcCCCceEEEEecccc-----cCCCCcEEEe--cCCCCh-HHHHHHHHHhCCCCCC
Confidence 58899999999875 5566666676653 26999998761 1111111222 111111 11222221 2356799
Q ss_pred EEEEcCC-----C------------HHHHHHHHHHhhcCCEEEEe
Q 048013 171 VSFDCAG-----F------------NKTMSTALSATRAGGKVCLV 198 (216)
Q Consensus 171 ~vi~~~g-----~------------~~~~~~~~~~l~~~G~~v~~ 198 (216)
+|+.... . ...++.+.+.|+|+|++++.
T Consensus 120 ~V~S~~~~~~~g~~~~d~~~~~~~~~~~L~~~~~~LkpGG~~vi~ 164 (209)
T PRK11188 120 VVMSDMAPNMSGTPAVDIPRAMYLVELALDMCRDVLAPGGSFVVK 164 (209)
T ss_pred EEecCCCCccCCChHHHHHHHHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 9997542 2 13567888899999999874
No 404
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=96.83 E-value=0.06 Score=41.79 Aligned_cols=80 Identities=15% Similarity=0.222 Sum_probs=47.1
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChH--HHHHHHHcC---CC-EEEeCCCC-cccHHHHHHHHHHHcCCC
Q 048013 97 TNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDY--RLSVAKKLG---AD-NIVKVSTN-LQDIAEEVEKIQKAMGTG 168 (216)
Q Consensus 97 ~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~--~~~~~~~~g---~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~ 168 (216)
++++|.|+ |++|..+++.+...|++ |+.++++.. ..+..+++. .. ..+..+-. .++..+.++++... -.+
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~-vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~~~ 80 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYR-VIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEE-EGP 80 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCE-EEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHH-cCC
Confidence 47899985 99999999988888984 888877743 122223222 11 12222211 22333334443322 246
Q ss_pred ccEEEEcCCC
Q 048013 169 IDVSFDCAGF 178 (216)
Q Consensus 169 ~d~vi~~~g~ 178 (216)
+|++|.++|.
T Consensus 81 id~vi~~ag~ 90 (245)
T PRK12824 81 VDILVNNAGI 90 (245)
T ss_pred CCEEEECCCC
Confidence 9999999874
No 405
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=96.83 E-value=0.029 Score=43.86 Aligned_cols=104 Identities=20% Similarity=0.253 Sum_probs=66.5
Q ss_pred cCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChHHHHHHHH----cCCCEEEeCCCCcccHHHHHHHHHHHc
Q 048013 91 ANIGPETNVLIMGSGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVAKK----LGADNIVKVSTNLQDIAEEVEKIQKAM 165 (216)
Q Consensus 91 ~~~~~~~~vlv~Gag~~G~~~i~~a~~~g-~~~vv~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (216)
.+..+.++||-+|.|. |..++.+++.++ ..+++.++.+++..+.+++ .|....+.+ ...++.+.+.++....
T Consensus 64 ~~~~~~~~vLEiGt~~-G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~--~~gda~~~L~~l~~~~ 140 (234)
T PLN02781 64 VKIMNAKNTLEIGVFT-GYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINF--IQSDALSALDQLLNND 140 (234)
T ss_pred HHHhCCCEEEEecCcc-cHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEE--EEccHHHHHHHHHhCC
Confidence 4456778999999653 556666666653 3369999999988776644 455432221 1234444454442211
Q ss_pred -CCCccEEEEcCCC---HHHHHHHHHHhhcCCEEEE
Q 048013 166 -GTGIDVSFDCAGF---NKTMSTALSATRAGGKVCL 197 (216)
Q Consensus 166 -~~~~d~vi~~~g~---~~~~~~~~~~l~~~G~~v~ 197 (216)
...||.||--..- ...+..+++.++|||.++.
T Consensus 141 ~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~ 176 (234)
T PLN02781 141 PKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAF 176 (234)
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 3579999865432 3567888999999998885
No 406
>PRK08251 short chain dehydrogenase; Provisional
Probab=96.82 E-value=0.023 Score=44.40 Aligned_cols=80 Identities=20% Similarity=0.272 Sum_probs=50.6
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHH-c-----CCC-EEEeCCC-CcccHHHHHHHHHHHcC
Q 048013 96 ETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKK-L-----GAD-NIVKVST-NLQDIAEEVEKIQKAMG 166 (216)
Q Consensus 96 ~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~-~-----g~~-~~~~~~~-~~~~~~~~~~~~~~~~~ 166 (216)
+++++|+|+ |++|..+++.+...|++ |++++++.++.+.+.. + +.. ..+..+- +.+...+.++++.+. -
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~ 79 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRD-LALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDE-L 79 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence 467999996 99999999888888984 8888888876654421 1 211 1222222 222334444444332 3
Q ss_pred CCccEEEEcCC
Q 048013 167 TGIDVSFDCAG 177 (216)
Q Consensus 167 ~~~d~vi~~~g 177 (216)
.++|++|.++|
T Consensus 80 ~~id~vi~~ag 90 (248)
T PRK08251 80 GGLDRVIVNAG 90 (248)
T ss_pred CCCCEEEECCC
Confidence 47999999987
No 407
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=96.82 E-value=0.0072 Score=45.87 Aligned_cols=94 Identities=17% Similarity=0.174 Sum_probs=57.3
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHH----cCCCEEEeCCCCcccHHHHHHHHHHHcCC
Q 048013 92 NIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKK----LGADNIVKVSTNLQDIAEEVEKIQKAMGT 167 (216)
Q Consensus 92 ~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (216)
...++.+||.+|+|. |..++.+++ .|. .|+++|.++.-.+.+++ .+...... ..+. ... ....
T Consensus 27 ~~~~~~~vLDiGcG~-G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~v~~~----~~d~----~~~--~~~~ 93 (195)
T TIGR00477 27 KTVAPCKTLDLGCGQ-GRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLPLRTD----AYDI----NAA--ALNE 93 (195)
T ss_pred ccCCCCcEEEeCCCC-CHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCCceeE----eccc----hhc--cccC
Confidence 344567899999864 667777776 477 49999999876665533 23321111 0111 111 0124
Q ss_pred CccEEEEcCC-----C---HHHHHHHHHHhhcCCEEEEe
Q 048013 168 GIDVSFDCAG-----F---NKTMSTALSATRAGGKVCLV 198 (216)
Q Consensus 168 ~~d~vi~~~g-----~---~~~~~~~~~~l~~~G~~v~~ 198 (216)
.+|+|+.... . ...++.+.+.|+|+|.++++
T Consensus 94 ~fD~I~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~ 132 (195)
T TIGR00477 94 DYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPGGYNLIV 132 (195)
T ss_pred CCCEEEEecccccCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 6999986522 1 24667888899999985544
No 408
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=96.81 E-value=0.041 Score=42.60 Aligned_cols=92 Identities=16% Similarity=0.097 Sum_probs=57.9
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh-HHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEE
Q 048013 95 PETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDD-YRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 173 (216)
Q Consensus 95 ~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 173 (216)
.+..|||+|+|.++.-=+..+...|++ |.++...- +.+..+.+.+.-..+. ..+.. ..+ .++++||
T Consensus 24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA~-VtVVap~i~~el~~l~~~~~i~~~~-----r~~~~--~dl-----~g~~LVi 90 (223)
T PRK05562 24 NKIKVLIIGGGKAAFIKGKTFLKKGCY-VYILSKKFSKEFLDLKKYGNLKLIK-----GNYDK--EFI-----KDKHLIV 90 (223)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEcCCCCHHHHHHHhCCCEEEEe-----CCCCh--HHh-----CCCcEEE
Confidence 577999999999998878888889996 66664332 2222222222222211 11111 111 3689999
Q ss_pred EcCCCHHHHHHHHHHhhcCCEEEEec
Q 048013 174 DCAGFNKTMSTALSATRAGGKVCLVG 199 (216)
Q Consensus 174 ~~~g~~~~~~~~~~~l~~~G~~v~~g 199 (216)
-+++++..-+.....++..+.++...
T Consensus 91 aATdD~~vN~~I~~~a~~~~~lvn~v 116 (223)
T PRK05562 91 IATDDEKLNNKIRKHCDRLYKLYIDC 116 (223)
T ss_pred ECCCCHHHHHHHHHHHHHcCCeEEEc
Confidence 99999777777777777767666554
No 409
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=96.81 E-value=0.00028 Score=49.48 Aligned_cols=49 Identities=31% Similarity=0.523 Sum_probs=34.5
Q ss_pred cCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEEcCC--CHHHHHHHHHHhhcCCEEEEec
Q 048013 139 LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG--FNKTMSTALSATRAGGKVCLVG 199 (216)
Q Consensus 139 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g--~~~~~~~~~~~l~~~G~~v~~g 199 (216)
||++++++|+. .++ ..+.++|+|||++| ....+..++++| ++|+++.+|
T Consensus 1 LGAd~vidy~~--~~~---------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~ 51 (127)
T PF13602_consen 1 LGADEVIDYRD--TDF---------AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIG 51 (127)
T ss_dssp CT-SEEEETTC--SHH---------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-
T ss_pred CCcCEEecCCC--ccc---------cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEEC
Confidence 68899998753 333 24678999999999 644447777888 999999887
No 410
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=96.80 E-value=0.018 Score=45.36 Aligned_cols=101 Identities=18% Similarity=0.202 Sum_probs=58.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCC-CEEEeCCCCcccHHHHHHHHHHHcCCCccEE
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGA-DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 172 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 172 (216)
.+++|+|+|+ |.+|..+++.+...|++ |+++.++.++......-+. -.++..+-. +..+.+.+ ..+.++|++
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~~-V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~--d~~~~l~~---~~~~~~d~v 89 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGFA-VKAGVRDVDKAKTSLPQDPSLQIVRADVT--EGSDKLVE---AIGDDSDAV 89 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCCE-EEEEecCHHHHHHhcccCCceEEEEeeCC--CCHHHHHH---HhhcCCCEE
Confidence 4578999996 99999999988888985 8888888766433221111 111211111 11111221 122479999
Q ss_pred EEcCCCHH-------------HHHHHHHHhhcC--CEEEEeccC
Q 048013 173 FDCAGFNK-------------TMSTALSATRAG--GKVCLVGMG 201 (216)
Q Consensus 173 i~~~g~~~-------------~~~~~~~~l~~~--G~~v~~g~~ 201 (216)
|.++|... ....+++.+... ++++.++..
T Consensus 90 i~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 90 ICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred EECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 99877411 134555555543 588887743
No 411
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=96.80 E-value=0.028 Score=43.91 Aligned_cols=84 Identities=19% Similarity=0.321 Sum_probs=53.2
Q ss_pred CCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH----HHcCCCE--EE--eCCC-CcccHHHHHHHHH
Q 048013 93 IGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KKLGADN--IV--KVST-NLQDIAEEVEKIQ 162 (216)
Q Consensus 93 ~~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~----~~~g~~~--~~--~~~~-~~~~~~~~~~~~~ 162 (216)
..++++++|.|+ |++|..+++.+...|++ |++++++.++.+.+ ++.+... .+ +.+. +..+..+.+..+.
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~-Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 87 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGAT-VILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIE 87 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCc-EEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHH
Confidence 457889999986 99999999988888995 88898887664333 2333221 22 2211 1233333344443
Q ss_pred HHcCCCccEEEEcCCC
Q 048013 163 KAMGTGIDVSFDCAGF 178 (216)
Q Consensus 163 ~~~~~~~d~vi~~~g~ 178 (216)
+. ..++|.+|.+++.
T Consensus 88 ~~-~~~id~vi~~Ag~ 102 (247)
T PRK08945 88 EQ-FGRLDGVLHNAGL 102 (247)
T ss_pred HH-hCCCCEEEECCcc
Confidence 22 2479999998864
No 412
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=96.79 E-value=0.065 Score=43.22 Aligned_cols=114 Identities=15% Similarity=0.224 Sum_probs=69.4
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HH----cCCCE---EEeCCCCcccHHHHHHHHHHH
Q 048013 94 GPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KK----LGADN---IVKVSTNLQDIAEEVEKIQKA 164 (216)
Q Consensus 94 ~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~----~g~~~---~~~~~~~~~~~~~~~~~~~~~ 164 (216)
+-|++.+|.|+ .++|.+-+.=+...|. +|+.+.|+++|++.. ++ .++.. .+|+...++++++..+.+
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAkrG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l--- 122 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAKRGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKL--- 122 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHh---
Confidence 34688999997 6999775544444899 499999999998765 22 34321 233333333233332232
Q ss_pred cCCCccEEEEcCCCH----H-----------------------HHHHHHHHh--hcCCEEEEeccCCCCCcccchh
Q 048013 165 MGTGIDVSFDCAGFN----K-----------------------TMSTALSAT--RAGGKVCLVGMGHREMTVPLTP 211 (216)
Q Consensus 165 ~~~~~d~vi~~~g~~----~-----------------------~~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~ 211 (216)
.+-.+-+.++++|-. + ..+..+..| +..|.++.+|...+-.+.+...
T Consensus 123 ~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s 198 (312)
T KOG1014|consen 123 AGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLS 198 (312)
T ss_pred cCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHH
Confidence 455677889998851 1 223344443 3568999999766655655543
No 413
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.78 E-value=0.016 Score=46.79 Aligned_cols=38 Identities=13% Similarity=0.271 Sum_probs=33.4
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHH
Q 048013 97 TNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSV 135 (216)
Q Consensus 97 ~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~ 135 (216)
.+|.|+|+|.+|..+++.+...|.+ |+..|.+++.++.
T Consensus 6 ~~V~ViGaG~mG~~iA~~~a~~G~~-V~l~d~~~~~~~~ 43 (286)
T PRK07819 6 QRVGVVGAGQMGAGIAEVCARAGVD-VLVFETTEELATA 43 (286)
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCE-EEEEECCHHHHHH
Confidence 4789999999999999988888995 9999999988765
No 414
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=96.78 E-value=0.032 Score=45.91 Aligned_cols=96 Identities=17% Similarity=0.171 Sum_probs=63.4
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHH-HcCCCeEEEEcCChHHHHHH-HHc----CCCEEEeCCCCcccHHHHHHHHHHHcC
Q 048013 93 IGPETNVLIMGSGPIGLVTMLAAR-AFGAPRIVIVDVDDYRLSVA-KKL----GADNIVKVSTNLQDIAEEVEKIQKAMG 166 (216)
Q Consensus 93 ~~~~~~vlv~Gag~~G~~~i~~a~-~~g~~~vv~~~~~~~~~~~~-~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (216)
.+..++++|+|+|..+...+..+. ..+.+++.+.+++.++.+.+ +++ +.. +... .+..+.+
T Consensus 126 ~~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~----~~~~~av-------- 192 (326)
T TIGR02992 126 REDSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAA----TDPRAAM-------- 192 (326)
T ss_pred CCCCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEe----CCHHHHh--------
Confidence 455678999999999988887776 47877899999998876543 433 332 2111 1222221
Q ss_pred CCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCC
Q 048013 167 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 167 ~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
...|+|+.+++....+ .....++++-.+..+|...
T Consensus 193 ~~aDiVvtaT~s~~p~-i~~~~l~~g~~i~~vg~~~ 227 (326)
T TIGR02992 193 SGADIIVTTTPSETPI-LHAEWLEPGQHVTAMGSDA 227 (326)
T ss_pred ccCCEEEEecCCCCcE-ecHHHcCCCcEEEeeCCCC
Confidence 3699999999874321 1224578888888888543
No 415
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase. MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.
Probab=96.78 E-value=0.039 Score=42.83 Aligned_cols=103 Identities=20% Similarity=0.259 Sum_probs=64.8
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChHHHHHHHH----cCCCEEEeCCCCcccHHHHHHHHHH
Q 048013 89 RRANIGPETNVLIMGSGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAKK----LGADNIVKVSTNLQDIAEEVEKIQK 163 (216)
Q Consensus 89 ~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~-~~vv~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~ 163 (216)
....++++++||-+|+|. |..+..+++..+. ..++++|.+++..+.+++ .+.+.+..+.. +.. ++.
T Consensus 39 ~~l~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~---d~~----~~~- 109 (231)
T TIGR02752 39 KRMNVQAGTSALDVCCGT-ADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHG---NAM----ELP- 109 (231)
T ss_pred HhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEe---chh----cCC-
Confidence 456678899999999875 6667777776542 269999999887766643 23322211111 111 110
Q ss_pred HcCCCccEEEEcCC-----C-HHHHHHHHHHhhcCCEEEEecc
Q 048013 164 AMGTGIDVSFDCAG-----F-NKTMSTALSATRAGGKVCLVGM 200 (216)
Q Consensus 164 ~~~~~~d~vi~~~g-----~-~~~~~~~~~~l~~~G~~v~~g~ 200 (216)
.....+|+|+-... . ...++.+.+.|+|+|+++..-.
T Consensus 110 ~~~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 152 (231)
T TIGR02752 110 FDDNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPGGKVVCLET 152 (231)
T ss_pred CCCCCccEEEEecccccCCCHHHHHHHHHHHcCcCeEEEEEEC
Confidence 12356999876422 2 2456788999999999987653
No 416
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=96.78 E-value=0.031 Score=47.77 Aligned_cols=103 Identities=17% Similarity=0.197 Sum_probs=62.8
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH----HHcCCCEEE-eCCCCcccHHHHHHHHHH
Q 048013 89 RRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KKLGADNIV-KVSTNLQDIAEEVEKIQK 163 (216)
Q Consensus 89 ~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~----~~~g~~~~~-~~~~~~~~~~~~~~~~~~ 163 (216)
....++++++||-.|+|+ |..++.+++.++-..|+++|.++++++.+ +++|....+ ..+.+..+. ..+
T Consensus 232 ~~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~~~~----~~~-- 304 (426)
T TIGR00563 232 TWLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDGRGP----SQW-- 304 (426)
T ss_pred HHhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeccccccc----ccc--
Confidence 445678899999998764 54555666665523699999999987665 345665211 111111100 000
Q ss_pred HcCCCccEEEE---cCCC-------------------------HHHHHHHHHHhhcCCEEEEe
Q 048013 164 AMGTGIDVSFD---CAGF-------------------------NKTMSTALSATRAGGKVCLV 198 (216)
Q Consensus 164 ~~~~~~d~vi~---~~g~-------------------------~~~~~~~~~~l~~~G~~v~~ 198 (216)
.....||.|+- |+|. ...+..+++.|+|||+++..
T Consensus 305 ~~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~LkpgG~lvys 367 (426)
T TIGR00563 305 AENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTGGTLVYA 367 (426)
T ss_pred ccccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 01346999885 3431 13567788899999988743
No 417
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=96.78 E-value=0.015 Score=46.95 Aligned_cols=37 Identities=19% Similarity=0.318 Sum_probs=32.2
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 048013 94 GPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDD 130 (216)
Q Consensus 94 ~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~ 130 (216)
..+++++|+|+|++|.+++..+...|+++|++++++.
T Consensus 124 ~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 124 VKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 3568899999999999999988889997788898885
No 418
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=96.78 E-value=0.042 Score=44.73 Aligned_cols=36 Identities=22% Similarity=0.158 Sum_probs=28.9
Q ss_pred CCCEEEEEcC---CHHHHHHHHHHHHcCCCeEEEEcCChHH
Q 048013 95 PETNVLIMGS---GPIGLVTMLAARAFGAPRIVIVDVDDYR 132 (216)
Q Consensus 95 ~~~~vlv~Ga---g~~G~~~i~~a~~~g~~~vv~~~~~~~~ 132 (216)
.++++||.|+ .++|.++++.+...|++ |+. .++.++
T Consensus 8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~-Vv~-~~~~~~ 46 (303)
T PLN02730 8 RGKRAFIAGVADDNGYGWAIAKALAAAGAE-ILV-GTWVPA 46 (303)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCE-EEE-EeCcch
Confidence 5889999997 79999999999999996 666 444443
No 419
>PRK08264 short chain dehydrogenase; Validated
Probab=96.77 E-value=0.011 Score=45.81 Aligned_cols=77 Identities=21% Similarity=0.267 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCE-EEeCCCCcccHHHHHHHHHHHcCCCccEE
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADN-IVKVSTNLQDIAEEVEKIQKAMGTGIDVS 172 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 172 (216)
.+++++|+|+ |.+|..+++.+...|+++|++++++.++.+. .+... .+..+-. +. +.+.++.+. -..+|++
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~--~~-~~~~~~~~~-~~~id~v 77 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVT--DP-ASVAAAAEA-ASDVTIL 77 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCC--CH-HHHHHHHHh-cCCCCEE
Confidence 4678999986 9999999999999998448888888766543 32221 2221111 11 123333222 2358999
Q ss_pred EEcCCC
Q 048013 173 FDCAGF 178 (216)
Q Consensus 173 i~~~g~ 178 (216)
|.+.|.
T Consensus 78 i~~ag~ 83 (238)
T PRK08264 78 VNNAGI 83 (238)
T ss_pred EECCCc
Confidence 999886
No 420
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.77 E-value=0.11 Score=40.20 Aligned_cols=82 Identities=21% Similarity=0.257 Sum_probs=46.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChH-HHH-HH---HHcCCCE-EEeCCCCc-ccHHHHHHHHHHHcC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDY-RLS-VA---KKLGADN-IVKVSTNL-QDIAEEVEKIQKAMG 166 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~-~~~-~~---~~~g~~~-~~~~~~~~-~~~~~~~~~~~~~~~ 166 (216)
.+++++|.|+ |.+|..+++.+...|++ |+++.++.. +.+ .. +..+... .+..+-.+ +++.+.+.++.+. -
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~ 81 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGAN-VVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAE-F 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence 4578999996 99999999999999996 655555433 222 22 2223222 12112211 2222333333322 2
Q ss_pred CCccEEEEcCCC
Q 048013 167 TGIDVSFDCAGF 178 (216)
Q Consensus 167 ~~~d~vi~~~g~ 178 (216)
.++|.+|.++|.
T Consensus 82 ~~id~vi~~ag~ 93 (248)
T PRK05557 82 GGVDILVNNAGI 93 (248)
T ss_pred CCCCEEEECCCc
Confidence 468999998874
No 421
>PRK06114 short chain dehydrogenase; Provisional
Probab=96.77 E-value=0.024 Score=44.58 Aligned_cols=82 Identities=15% Similarity=0.297 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChH-HHH-H---HHHcCCCE-EEeCCC-CcccHHHHHHHHHHHcC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDY-RLS-V---AKKLGADN-IVKVST-NLQDIAEEVEKIQKAMG 166 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~-~~~-~---~~~~g~~~-~~~~~~-~~~~~~~~~~~~~~~~~ 166 (216)
.+++++|.|+ +++|..+++.+...|++ |++++++.+ ..+ . ++..+... .+..+- +.++..+.+.++.+..
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~-v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~- 84 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGAD-VALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAEL- 84 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence 5688999986 89999999999999995 888877643 222 2 22334322 222222 2223334444443333
Q ss_pred CCccEEEEcCCC
Q 048013 167 TGIDVSFDCAGF 178 (216)
Q Consensus 167 ~~~d~vi~~~g~ 178 (216)
.++|++|.+.|.
T Consensus 85 g~id~li~~ag~ 96 (254)
T PRK06114 85 GALTLAVNAAGI 96 (254)
T ss_pred CCCCEEEECCCC
Confidence 469999999984
No 422
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=96.76 E-value=0.027 Score=47.29 Aligned_cols=35 Identities=37% Similarity=0.499 Sum_probs=31.7
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 048013 95 PETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVD 129 (216)
Q Consensus 95 ~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~ 129 (216)
.+.+|+|+|+|++|..++..+...|..++..+|.+
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 55689999999999999999999999889999887
No 423
>PRK12744 short chain dehydrogenase; Provisional
Probab=96.74 E-value=0.057 Score=42.44 Aligned_cols=82 Identities=18% Similarity=0.195 Sum_probs=47.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCC----hHHHH-H---HHHcCCCE-EEeCCC-CcccHHHHHHHHHH
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVD----DYRLS-V---AKKLGADN-IVKVST-NLQDIAEEVEKIQK 163 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~----~~~~~-~---~~~~g~~~-~~~~~~-~~~~~~~~~~~~~~ 163 (216)
.+++++|+|+ |++|..+++.+...|++ ++++.++ .+..+ . ++..+... .+..+- +.++..+.+.++.+
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~-vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 85 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGAK-AVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKA 85 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCc-EEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHH
Confidence 4678999996 89999999999989996 5555322 22222 2 22234332 222221 22233333333332
Q ss_pred HcCCCccEEEEcCCC
Q 048013 164 AMGTGIDVSFDCAGF 178 (216)
Q Consensus 164 ~~~~~~d~vi~~~g~ 178 (216)
. ..++|++|.++|.
T Consensus 86 ~-~~~id~li~~ag~ 99 (257)
T PRK12744 86 A-FGRPDIAINTVGK 99 (257)
T ss_pred h-hCCCCEEEECCcc
Confidence 2 2479999999985
No 424
>PRK07069 short chain dehydrogenase; Validated
Probab=96.74 E-value=0.044 Score=42.76 Aligned_cols=101 Identities=20% Similarity=0.259 Sum_probs=60.2
Q ss_pred EEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCC-hHHHHHH-HHc----CCCEE--E--eCCCCcccHHHHHHHHHHHcCC
Q 048013 99 VLIMGS-GPIGLVTMLAARAFGAPRIVIVDVD-DYRLSVA-KKL----GADNI--V--KVSTNLQDIAEEVEKIQKAMGT 167 (216)
Q Consensus 99 vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~-~~~~~~~-~~~----g~~~~--~--~~~~~~~~~~~~~~~~~~~~~~ 167 (216)
++|+|+ |++|..+++.+...|++ |++++++ .++.+.+ +++ +.... + ++ .+.+.+.+.+.++.+. -+
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~~ 78 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAK-VFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDV-TDEAQWQALLAQAADA-MG 78 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCE-EEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeec-CCHHHHHHHHHHHHHH-cC
Confidence 788885 89999999999889995 8888877 5544433 222 11111 1 22 1223333344444322 24
Q ss_pred CccEEEEcCCCH-----------H--------------HHHHHHHHhhc--CCEEEEeccCC
Q 048013 168 GIDVSFDCAGFN-----------K--------------TMSTALSATRA--GGKVCLVGMGH 202 (216)
Q Consensus 168 ~~d~vi~~~g~~-----------~--------------~~~~~~~~l~~--~G~~v~~g~~~ 202 (216)
++|++|.++|.. + ..+.+++.++. .|+++.++...
T Consensus 79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~ 140 (251)
T PRK07069 79 GLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVA 140 (251)
T ss_pred CccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChh
Confidence 699999998741 0 23455566643 47888887543
No 425
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=96.73 E-value=0.06 Score=43.48 Aligned_cols=114 Identities=17% Similarity=0.151 Sum_probs=72.6
Q ss_pred CCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHH-H--cCCCE--EEeCCCCcccHHHHHHHHHH-Hc
Q 048013 93 IGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK-K--LGADN--IVKVSTNLQDIAEEVEKIQK-AM 165 (216)
Q Consensus 93 ~~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~-~--~g~~~--~~~~~~~~~~~~~~~~~~~~-~~ 165 (216)
..+++.|+|.|+ ++.|.+.+.-+...|.. |++.--+++.-+.++ + .+--. ..++ +.+++..+..+.+.+ ..
T Consensus 26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~-V~Agcl~~~gae~L~~~~~s~rl~t~~LDV-T~~esi~~a~~~V~~~l~ 103 (322)
T KOG1610|consen 26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFR-VFAGCLTEEGAESLRGETKSPRLRTLQLDV-TKPESVKEAAQWVKKHLG 103 (322)
T ss_pred ccCCcEEEEecCCcHHHHHHHHHHHhcCCE-EEEEeecCchHHHHhhhhcCCcceeEeecc-CCHHHHHHHHHHHHHhcc
Confidence 456778999998 99999999999999995 666645544433332 1 22212 2232 334444444333332 23
Q ss_pred CCCccEEEEcCCCH--------------------------HHHHHHHHHhhc-CCEEEEeccCCCCCccc
Q 048013 166 GTGIDVSFDCAGFN--------------------------KTMSTALSATRA-GGKVCLVGMGHREMTVP 208 (216)
Q Consensus 166 ~~~~d~vi~~~g~~--------------------------~~~~~~~~~l~~-~G~~v~~g~~~~~~~~~ 208 (216)
..+...+++++|-. ...+..+.++++ .||++.++...+..+.|
T Consensus 104 ~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~~p 173 (322)
T KOG1610|consen 104 EDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVALP 173 (322)
T ss_pred cccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCccCc
Confidence 56689999999831 245667777765 69999999777665553
No 426
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=96.73 E-value=0.023 Score=44.13 Aligned_cols=100 Identities=21% Similarity=0.336 Sum_probs=60.6
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChH-------------------HHHHH----HHcCCC-EEEeCCCC
Q 048013 95 PETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDY-------------------RLSVA----KKLGAD-NIVKVSTN 150 (216)
Q Consensus 95 ~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~-------------------~~~~~----~~~g~~-~~~~~~~~ 150 (216)
+..+|+|.|.|++|..++..+.+.|+.++..+|.+.- |.+.+ +.+.+. ++..+
T Consensus 29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~--- 105 (263)
T COG1179 29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAI--- 105 (263)
T ss_pred hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeeh---
Confidence 4578999999999999999999999998888876641 11111 112221 22211
Q ss_pred cccH-HHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCC-EEEEecc
Q 048013 151 LQDI-AEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGG-KVCLVGM 200 (216)
Q Consensus 151 ~~~~-~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G-~~v~~g~ 200 (216)
+..+ .+.+.++ ...++|+|+||+-+-..--.++..+..++ .++..+.
T Consensus 106 ~~f~t~en~~~~---~~~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~G 154 (263)
T COG1179 106 NDFITEENLEDL---LSKGFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMG 154 (263)
T ss_pred HhhhCHhHHHHH---hcCCCCEEEEchhhhHHHHHHHHHHHHcCCCEEeecc
Confidence 1111 1223333 45689999999998444334555555554 5555543
No 427
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=96.72 E-value=0.01 Score=47.45 Aligned_cols=54 Identities=19% Similarity=0.153 Sum_probs=42.2
Q ss_pred HHHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HHc
Q 048013 86 HACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KKL 139 (216)
Q Consensus 86 ~~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~~ 139 (216)
++++..+...+++++|+|+|+.+.+++..++.+|+..+.+++|+.++.+.+ +.+
T Consensus 112 ~~L~~~~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~ 166 (272)
T PRK12550 112 KLLASYQVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY 166 (272)
T ss_pred HHHHhcCCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence 445444444567899999999999999999999998899999998876654 344
No 428
>PRK06720 hypothetical protein; Provisional
Probab=96.71 E-value=0.044 Score=40.62 Aligned_cols=82 Identities=23% Similarity=0.336 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-H---HcCCCE-EEeCCC-CcccHHHHHHHHHHHcCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-K---KLGADN-IVKVST-NLQDIAEEVEKIQKAMGT 167 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~---~~g~~~-~~~~~~-~~~~~~~~~~~~~~~~~~ 167 (216)
+++.++|.|+ +++|..++..+...|++ |++++++.+..+.. + +.+... .+..+- +.+++.+.+.++.+.. +
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~-V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~-G 92 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAK-VIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAF-S 92 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence 5788999996 79999999888888985 88888887654332 2 234332 222222 1223334444433322 4
Q ss_pred CccEEEEcCCC
Q 048013 168 GIDVSFDCAGF 178 (216)
Q Consensus 168 ~~d~vi~~~g~ 178 (216)
++|++++++|.
T Consensus 93 ~iDilVnnAG~ 103 (169)
T PRK06720 93 RIDMLFQNAGL 103 (169)
T ss_pred CCCEEEECCCc
Confidence 68999999885
No 429
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=96.71 E-value=0.018 Score=46.25 Aligned_cols=43 Identities=26% Similarity=0.247 Sum_probs=36.6
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCC
Q 048013 98 NVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGA 141 (216)
Q Consensus 98 ~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~ 141 (216)
+|.|+|.|.+|...+..++..|.+ |++.++++++.+.+.+.|.
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~~-V~~~d~~~~~~~~a~~~g~ 44 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGHT-VYGVSRRESTCERAIERGL 44 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHCCC
Confidence 588899999999998888888884 9999999988888877664
No 430
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=96.71 E-value=0.0079 Score=49.14 Aligned_cols=87 Identities=11% Similarity=0.175 Sum_probs=57.1
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEE
Q 048013 95 PETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 174 (216)
Q Consensus 95 ~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 174 (216)
.++++.|+|.|.+|..+++.++.+|++ |++.+++.++.. +...... ..+ +.++. ...|+|+.
T Consensus 135 ~g~tvgIvG~G~IG~~vA~~l~afG~~-V~~~~~~~~~~~-----~~~~~~~----~~~----l~e~l----~~aDvvv~ 196 (312)
T PRK15469 135 EDFTIGILGAGVLGSKVAQSLQTWGFP-LRCWSRSRKSWP-----GVQSFAG----REE----LSAFL----SQTRVLIN 196 (312)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEeCCCCCCC-----Cceeecc----ccc----HHHHH----hcCCEEEE
Confidence 578999999999999999999999995 888887643321 1111110 011 22221 24788888
Q ss_pred cCCCHHHH-----HHHHHHhhcCCEEEEec
Q 048013 175 CAGFNKTM-----STALSATRAGGKVCLVG 199 (216)
Q Consensus 175 ~~g~~~~~-----~~~~~~l~~~G~~v~~g 199 (216)
+....... ...+..|+++..++.+|
T Consensus 197 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~a 226 (312)
T PRK15469 197 LLPNTPETVGIINQQLLEQLPDGAYLLNLA 226 (312)
T ss_pred CCCCCHHHHHHhHHHHHhcCCCCcEEEECC
Confidence 87753222 34666788888888776
No 431
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=96.70 E-value=0.031 Score=43.96 Aligned_cols=82 Identities=17% Similarity=0.247 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH----HHcCCCE-EEeCCC-CcccHHHHHHHHHHHcCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KKLGADN-IVKVST-NLQDIAEEVEKIQKAMGT 167 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~----~~~g~~~-~~~~~~-~~~~~~~~~~~~~~~~~~ 167 (216)
.+++++|.|+ +++|..+++.+...|++ ++.++++.++.+.+ +..+... .+..+- +.++..+.+.++.+. -.
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~-vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~~ 87 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGAS-VVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSK-LG 87 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence 4789999996 89999999988889995 78888877665433 2223321 222221 222333344444332 24
Q ss_pred CccEEEEcCCC
Q 048013 168 GIDVSFDCAGF 178 (216)
Q Consensus 168 ~~d~vi~~~g~ 178 (216)
++|+++.++|.
T Consensus 88 ~~d~li~~ag~ 98 (255)
T PRK06113 88 KVDILVNNAGG 98 (255)
T ss_pred CCCEEEECCCC
Confidence 68999999873
No 432
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=96.70 E-value=0.025 Score=45.64 Aligned_cols=43 Identities=16% Similarity=0.160 Sum_probs=36.3
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCC
Q 048013 98 NVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGA 141 (216)
Q Consensus 98 ~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~ 141 (216)
+|.|+|.|.+|..++..+...|.+ |++.+++.++.+.+.+.|.
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~~-V~~~dr~~~~~~~~~~~g~ 43 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGYQ-LHVTTIGPEVADELLAAGA 43 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCCe-EEEEcCCHHHHHHHHHCCC
Confidence 377889999999998888888985 8999999988888776655
No 433
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=96.70 E-value=0.055 Score=42.13 Aligned_cols=34 Identities=29% Similarity=0.445 Sum_probs=29.9
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 048013 96 ETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVD 129 (216)
Q Consensus 96 ~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~ 129 (216)
..+|+|.|+|++|..+++.+...|..+++.+|.+
T Consensus 21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D 54 (228)
T cd00757 21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDD 54 (228)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 5789999999999999999999999888888544
No 434
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=96.70 E-value=0.032 Score=43.34 Aligned_cols=82 Identities=21% Similarity=0.293 Sum_probs=52.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HHcCCCE-EEeCCCC-cccHHHHHHHHHHHcCCCcc
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KKLGADN-IVKVSTN-LQDIAEEVEKIQKAMGTGID 170 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~~g~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~d 170 (216)
++++++|.|+ |.+|..+++.+...|+ .|+..+++.++.+.+ ..++... .+..+-. .+...+.+.++.+.. .++|
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id 82 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADL-EGVD 82 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence 4678999996 9999999999988998 477787877766544 3344322 2222211 223333334443222 4799
Q ss_pred EEEEcCCC
Q 048013 171 VSFDCAGF 178 (216)
Q Consensus 171 ~vi~~~g~ 178 (216)
++|.++|.
T Consensus 83 ~vi~~ag~ 90 (245)
T PRK12936 83 ILVNNAGI 90 (245)
T ss_pred EEEECCCC
Confidence 99999884
No 435
>KOG1270 consensus Methyltransferases [Coenzyme transport and metabolism]
Probab=96.69 E-value=0.0057 Score=47.98 Aligned_cols=92 Identities=20% Similarity=0.284 Sum_probs=59.5
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcC-CCE--------EEeCCCCcccHHHHHHHHHHHcC
Q 048013 96 ETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLG-ADN--------IVKVSTNLQDIAEEVEKIQKAMG 166 (216)
Q Consensus 96 ~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g-~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 166 (216)
|.+||-.|+|+ |++..-+|+ +|+. |+++|.+++..+.+++-. .+. .+.+.. ..++.. -
T Consensus 90 g~~ilDvGCGg-GLLSepLAr-lga~-V~GID~s~~~V~vA~~h~~~dP~~~~~~~y~l~~~~------~~~E~~----~ 156 (282)
T KOG1270|consen 90 GMKILDVGCGG-GLLSEPLAR-LGAQ-VTGIDASDDMVEVANEHKKMDPVLEGAIAYRLEYED------TDVEGL----T 156 (282)
T ss_pred CceEEEeccCc-cccchhhHh-hCCe-eEeecccHHHHHHHHHhhhcCchhccccceeeehhh------cchhhc----c
Confidence 47899999876 888887777 7885 999999998877775421 111 111111 112221 2
Q ss_pred CCccEEEEcCC------CHHHHHHHHHHhhcCCEEEEecc
Q 048013 167 TGIDVSFDCAG------FNKTMSTALSATRAGGKVCLVGM 200 (216)
Q Consensus 167 ~~~d~vi~~~g------~~~~~~~~~~~l~~~G~~v~~g~ 200 (216)
..||+|+..=- .++.+..+++.|+|+|++++--.
T Consensus 157 ~~fDaVvcsevleHV~dp~~~l~~l~~~lkP~G~lfitti 196 (282)
T KOG1270|consen 157 GKFDAVVCSEVLEHVKDPQEFLNCLSALLKPNGRLFITTI 196 (282)
T ss_pred cccceeeeHHHHHHHhCHHHHHHHHHHHhCCCCceEeeeh
Confidence 34888875211 13566788999999999987654
No 436
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=96.69 E-value=0.033 Score=44.08 Aligned_cols=82 Identities=24% Similarity=0.311 Sum_probs=52.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH----HHcCCCE-EEeCCC-CcccHHHHHHHHHHHcCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KKLGADN-IVKVST-NLQDIAEEVEKIQKAMGT 167 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~----~~~g~~~-~~~~~~-~~~~~~~~~~~~~~~~~~ 167 (216)
.+++++|+|+ +++|..++..+...|++ +++++++.++.+.+ ++.+... .+..+- +.+...+.+.++.+.. .
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~-vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~ 86 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGAT-IVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEV-G 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC-C
Confidence 5688999996 89999999888889996 88888887765433 2234322 222222 2223333344443222 4
Q ss_pred CccEEEEcCCC
Q 048013 168 GIDVSFDCAGF 178 (216)
Q Consensus 168 ~~d~vi~~~g~ 178 (216)
++|++|.++|.
T Consensus 87 ~id~li~~ag~ 97 (265)
T PRK07097 87 VIDILVNNAGI 97 (265)
T ss_pred CCCEEEECCCC
Confidence 69999999984
No 437
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=96.67 E-value=0.026 Score=43.91 Aligned_cols=74 Identities=18% Similarity=0.295 Sum_probs=54.3
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHH--HcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEEc
Q 048013 98 NVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK--KLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 175 (216)
Q Consensus 98 ~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 175 (216)
.++|+|+|.+|...++.+...|.. |++++.++++.+... ++....+.. +..+ .+.++++ .-..+|+++-+
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~~-Vv~Id~d~~~~~~~~~~~~~~~~v~g-d~t~---~~~L~~a---gi~~aD~vva~ 73 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGHN-VVLIDRDEERVEEFLADELDTHVVIG-DATD---EDVLEEA---GIDDADAVVAA 73 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCCc-eEEEEcCHHHHHHHhhhhcceEEEEe-cCCC---HHHHHhc---CCCcCCEEEEe
Confidence 578899999999999999999995 999999999877633 365554433 2222 2234332 34679999999
Q ss_pred CCCH
Q 048013 176 AGFN 179 (216)
Q Consensus 176 ~g~~ 179 (216)
+++.
T Consensus 74 t~~d 77 (225)
T COG0569 74 TGND 77 (225)
T ss_pred eCCC
Confidence 9983
No 438
>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals. The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....
Probab=96.66 E-value=0.016 Score=37.79 Aligned_cols=86 Identities=20% Similarity=0.321 Sum_probs=53.6
Q ss_pred EEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCE---EEeCCCCcccHHHHHHHHHHHcCCCccEEEEcC
Q 048013 100 LIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADN---IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 176 (216)
Q Consensus 100 lv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 176 (216)
|-+|+| .|..+..+++.-+. .++++|.+++..+.+++..... ...- +..+ + .....-+|+|+...
T Consensus 1 LdiG~G-~G~~~~~l~~~~~~-~v~~~D~~~~~~~~~~~~~~~~~~~~~~~--d~~~-------l-~~~~~sfD~v~~~~ 68 (95)
T PF08241_consen 1 LDIGCG-TGRFAAALAKRGGA-SVTGIDISEEMLEQARKRLKNEGVSFRQG--DAED-------L-PFPDNSFDVVFSNS 68 (95)
T ss_dssp EEET-T-TSHHHHHHHHTTTC-EEEEEES-HHHHHHHHHHTTTSTEEEEES--BTTS-------S-SS-TT-EEEEEEES
T ss_pred CEecCc-CCHHHHHHHhccCC-EEEEEeCCHHHHHHHHhcccccCchheee--hHHh-------C-cccccccccccccc
Confidence 345776 47788888887344 6999999999888887644332 2221 1111 1 01245689988743
Q ss_pred CC------HHHHHHHHHHhhcCCEEEE
Q 048013 177 GF------NKTMSTALSATRAGGKVCL 197 (216)
Q Consensus 177 g~------~~~~~~~~~~l~~~G~~v~ 197 (216)
.- ...++++.+.|+|+|++++
T Consensus 69 ~~~~~~~~~~~l~e~~rvLk~gG~l~~ 95 (95)
T PF08241_consen 69 VLHHLEDPEAALREIYRVLKPGGRLVI 95 (95)
T ss_dssp HGGGSSHHHHHHHHHHHHEEEEEEEEE
T ss_pred ceeeccCHHHHHHHHHHHcCcCeEEeC
Confidence 32 3567899999999999874
No 439
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=96.65 E-value=0.032 Score=45.09 Aligned_cols=86 Identities=15% Similarity=0.148 Sum_probs=55.3
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEEcCC
Q 048013 98 NVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 177 (216)
Q Consensus 98 ~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 177 (216)
+|.|+|.|.+|...+..+...|.+ |++.+++.++.+.+.+.+.... .++.+.+ ...|+||.++.
T Consensus 4 ~IgviG~G~mG~~~a~~l~~~g~~-v~~~d~~~~~~~~~~~~g~~~~-------~~~~e~~--------~~~d~vi~~vp 67 (296)
T PRK11559 4 KVGFIGLGIMGKPMSKNLLKAGYS-LVVYDRNPEAVAEVIAAGAETA-------STAKAVA--------EQCDVIITMLP 67 (296)
T ss_pred eEEEEccCHHHHHHHHHHHHCCCe-EEEEcCCHHHHHHHHHCCCeec-------CCHHHHH--------hcCCEEEEeCC
Confidence 688999999999988888888885 8899999888877766654311 1111111 24788888877
Q ss_pred CHHHHHHH-------HHHhhcCCEEEEec
Q 048013 178 FNKTMSTA-------LSATRAGGKVCLVG 199 (216)
Q Consensus 178 ~~~~~~~~-------~~~l~~~G~~v~~g 199 (216)
.....+.. ...++++-.++.++
T Consensus 68 ~~~~~~~v~~~~~~~~~~~~~g~iiid~s 96 (296)
T PRK11559 68 NSPHVKEVALGENGIIEGAKPGTVVIDMS 96 (296)
T ss_pred CHHHHHHHHcCcchHhhcCCCCcEEEECC
Confidence 64433333 23344444455454
No 440
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=96.63 E-value=0.032 Score=43.60 Aligned_cols=81 Identities=26% Similarity=0.373 Sum_probs=51.0
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHH----cCCCE-EEeCCC-CcccHHHHHHHHHHHcCCC
Q 048013 96 ETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKK----LGADN-IVKVST-NLQDIAEEVEKIQKAMGTG 168 (216)
Q Consensus 96 ~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~----~g~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~ 168 (216)
++++||.|+ |.+|..++..+...|++ |++++++.++.+.+.. .+... .+..+- +.+++.+.++++.+. ..+
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~ 78 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGAN-VVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAE-FGG 78 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh-cCC
Confidence 357999996 99999999998889994 8989998776654432 22221 122221 222333444444332 346
Q ss_pred ccEEEEcCCC
Q 048013 169 IDVSFDCAGF 178 (216)
Q Consensus 169 ~d~vi~~~g~ 178 (216)
+|++|.+.+.
T Consensus 79 ~d~vi~~a~~ 88 (255)
T TIGR01963 79 LDILVNNAGI 88 (255)
T ss_pred CCEEEECCCC
Confidence 8999988864
No 441
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.62 E-value=0.036 Score=43.01 Aligned_cols=82 Identities=20% Similarity=0.334 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH----HHcCCCE-EEeCCCC-cccHHHHHHHHHHHcCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KKLGADN-IVKVSTN-LQDIAEEVEKIQKAMGT 167 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~----~~~g~~~-~~~~~~~-~~~~~~~~~~~~~~~~~ 167 (216)
.+++++|.|+ |++|..++..+...|++ |+.++++.++.+.. +..+... .+..+-. ..+..+.++++.+ .-.
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~ 83 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVN-VGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKN-ELG 83 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHH-HcC
Confidence 3578999986 89999999988889994 88898887664432 2233222 2222221 2223333343322 224
Q ss_pred CccEEEEcCCC
Q 048013 168 GIDVSFDCAGF 178 (216)
Q Consensus 168 ~~d~vi~~~g~ 178 (216)
++|++|.++|.
T Consensus 84 ~id~vi~~ag~ 94 (239)
T PRK07666 84 SIDILINNAGI 94 (239)
T ss_pred CccEEEEcCcc
Confidence 79999998874
No 442
>PRK14901 16S rRNA methyltransferase B; Provisional
Probab=96.62 E-value=0.036 Score=47.49 Aligned_cols=104 Identities=20% Similarity=0.274 Sum_probs=62.6
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChHHHHHH----HHcCCCEEEeCCCCcccHHHHHHHHHH
Q 048013 89 RRANIGPETNVLIMGSGPIGLVTMLAARAFG-APRIVIVDVDDYRLSVA----KKLGADNIVKVSTNLQDIAEEVEKIQK 163 (216)
Q Consensus 89 ~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g-~~~vv~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~ 163 (216)
....++++++||-.|+|+ |..+..+++.++ ...|+++|.++++.+.+ +.+|...+..... |..+ +.....
T Consensus 246 ~~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~rl~~~~~n~~r~g~~~v~~~~~---D~~~-~~~~~~ 320 (434)
T PRK14901 246 PLLDPQPGEVILDACAAP-GGKTTHIAELMGDQGEIWAVDRSASRLKKLQENAQRLGLKSIKILAA---DSRN-LLELKP 320 (434)
T ss_pred HHhCCCCcCEEEEeCCCC-chhHHHHHHHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCeEEEEeC---Chhh-cccccc
Confidence 345678899999998754 445555666543 22699999999887765 4467765433222 2111 110000
Q ss_pred HcCCCccEEEE---cCCC-------------------------HHHHHHHHHHhhcCCEEEE
Q 048013 164 AMGTGIDVSFD---CAGF-------------------------NKTMSTALSATRAGGKVCL 197 (216)
Q Consensus 164 ~~~~~~d~vi~---~~g~-------------------------~~~~~~~~~~l~~~G~~v~ 197 (216)
.....||.|+- |+|. ...+..+++.|+|+|+++.
T Consensus 321 ~~~~~fD~Vl~DaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lkpgG~lvy 382 (434)
T PRK14901 321 QWRGYFDRILLDAPCSGLGTLHRHPDARWRQTPEKIQELAPLQAELLESLAPLLKPGGTLVY 382 (434)
T ss_pred cccccCCEEEEeCCCCcccccccCcchhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 01246999875 3431 1346788899999998874
No 443
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=96.62 E-value=0.022 Score=43.68 Aligned_cols=104 Identities=23% Similarity=0.284 Sum_probs=68.0
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChHHHHHHH----HcCCCEEEeCCCCcccHHHHHHHHHHHc-C
Q 048013 93 IGPETNVLIMGSGPIGLVTMLAARAFGA-PRIVIVDVDDYRLSVAK----KLGADNIVKVSTNLQDIAEEVEKIQKAM-G 166 (216)
Q Consensus 93 ~~~~~~vlv~Gag~~G~~~i~~a~~~g~-~~vv~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~ 166 (216)
....++||-+|.+. |..++.+++.+.- .+++.++.+++..+.++ +.|....+.+ ...+..+.+.++.... .
T Consensus 43 ~~~~k~vLEIGt~~-GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~--~~gda~~~l~~l~~~~~~ 119 (205)
T PF01596_consen 43 LTRPKRVLEIGTFT-GYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEV--IEGDALEVLPELANDGEE 119 (205)
T ss_dssp HHT-SEEEEESTTT-SHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEE--EES-HHHHHHHHHHTTTT
T ss_pred hcCCceEEEecccc-ccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEE--EEeccHhhHHHHHhccCC
Confidence 45668999999753 7788888887642 26999999998877764 4565432221 2245566666654322 2
Q ss_pred CCccEEEEcCCC---HHHHHHHHHHhhcCCEEEEec
Q 048013 167 TGIDVSFDCAGF---NKTMSTALSATRAGGKVCLVG 199 (216)
Q Consensus 167 ~~~d~vi~~~g~---~~~~~~~~~~l~~~G~~v~~g 199 (216)
+.||.||--..- ...+..++++|+++|.++.=.
T Consensus 120 ~~fD~VFiDa~K~~y~~y~~~~~~ll~~ggvii~DN 155 (205)
T PF01596_consen 120 GQFDFVFIDADKRNYLEYFEKALPLLRPGGVIIADN 155 (205)
T ss_dssp TSEEEEEEESTGGGHHHHHHHHHHHEEEEEEEEEET
T ss_pred CceeEEEEcccccchhhHHHHHhhhccCCeEEEEcc
Confidence 479998754443 345678889999999988654
No 444
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=96.62 E-value=0.035 Score=43.20 Aligned_cols=82 Identities=18% Similarity=0.223 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH----HHcCCCE-EEeCCC-CcccHHHHHHHHHHHcCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KKLGADN-IVKVST-NLQDIAEEVEKIQKAMGT 167 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~----~~~g~~~-~~~~~~-~~~~~~~~~~~~~~~~~~ 167 (216)
.+++++|+|+ |.+|..+++.+...|++ |++++++.++...+ +..+... .+..+- +.++..+.++++.+. -.
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~ 82 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAE-VIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVED-FG 82 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-hC
Confidence 4678999996 99999999988888985 88898886554332 2223221 222221 122333333333222 23
Q ss_pred CccEEEEcCCC
Q 048013 168 GIDVSFDCAGF 178 (216)
Q Consensus 168 ~~d~vi~~~g~ 178 (216)
++|++|.+++.
T Consensus 83 ~~d~vi~~ag~ 93 (251)
T PRK12826 83 RLDILVANAGI 93 (251)
T ss_pred CCCEEEECCCC
Confidence 69999999864
No 445
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=96.62 E-value=0.063 Score=45.33 Aligned_cols=104 Identities=20% Similarity=0.269 Sum_probs=59.7
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHH-------HHHHcCCCEEEeCCCCcccHHHHHHHHHHHc
Q 048013 94 GPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLS-------VAKKLGADNIVKVSTNLQDIAEEVEKIQKAM 165 (216)
Q Consensus 94 ~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (216)
..+.+|+|+|+ |.+|..+++.+...|++ |++++++..+.+ ..+......++..+-.+. +.+.++.+..
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~-V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~---~~l~~~~~~~ 133 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGYN-VVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDA---DSLRKVLFSE 133 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEEechhhccccchhhHHhhhcCCceEEEeeCCCH---HHHHHHHHHh
Confidence 45678999996 99999999999889985 888888765421 111121112222111111 2233332111
Q ss_pred CCCccEEEEcCCCH------------HHHHHHHHHhhcC--CEEEEeccC
Q 048013 166 GTGIDVSFDCAGFN------------KTMSTALSATRAG--GKVCLVGMG 201 (216)
Q Consensus 166 ~~~~d~vi~~~g~~------------~~~~~~~~~l~~~--G~~v~~g~~ 201 (216)
+.++|+||+|++.. .....+++.+... ++++.++..
T Consensus 134 ~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~ 183 (390)
T PLN02657 134 GDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAI 183 (390)
T ss_pred CCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeec
Confidence 23699999988641 1123445555444 478887743
No 446
>PRK09134 short chain dehydrogenase; Provisional
Probab=96.62 E-value=0.031 Score=44.02 Aligned_cols=82 Identities=16% Similarity=0.213 Sum_probs=47.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcC-ChHHHHHH-HH---cCCCE-EEeCCC-CcccHHHHHHHHHHHcC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDV-DDYRLSVA-KK---LGADN-IVKVST-NLQDIAEEVEKIQKAMG 166 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~-~~~~~~~~-~~---~g~~~-~~~~~~-~~~~~~~~~~~~~~~~~ 166 (216)
.++++||.|+ |++|..+++.+...|++ ++++.+ +.++.+.+ ++ .+... .+..+- +.++..+.+.++.+..
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~- 85 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFD-VAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAAL- 85 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence 4678999996 89999999988889986 655544 44443322 22 23322 122121 1222333333333222
Q ss_pred CCccEEEEcCCC
Q 048013 167 TGIDVSFDCAGF 178 (216)
Q Consensus 167 ~~~d~vi~~~g~ 178 (216)
.++|++|.++|.
T Consensus 86 ~~iD~vi~~ag~ 97 (258)
T PRK09134 86 GPITLLVNNASL 97 (258)
T ss_pred CCCCEEEECCcC
Confidence 479999999874
No 447
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=96.61 E-value=0.015 Score=52.34 Aligned_cols=76 Identities=21% Similarity=0.313 Sum_probs=53.0
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChH---------------------HHHHHHHcCCCEEEeCCCCccc
Q 048013 95 PETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDY---------------------RLSVAKKLGADNIVKVSTNLQD 153 (216)
Q Consensus 95 ~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~---------------------~~~~~~~~g~~~~~~~~~~~~~ 153 (216)
.+++|+|+|+|+.|+.++..++..|++ |+++++.+. ..+.++++|++..++.... .+
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~~-Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~-~~ 386 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGVQ-VDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIG-RD 386 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCc-EEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccC-Cc
Confidence 478999999999999999999999996 888876652 3456677887654442110 11
Q ss_pred HHHHHHHHHHHcCCCccEEEEcCCC
Q 048013 154 IAEEVEKIQKAMGTGIDVSFDCAGF 178 (216)
Q Consensus 154 ~~~~~~~~~~~~~~~~d~vi~~~g~ 178 (216)
. .+.++ ..++|.+|.++|.
T Consensus 387 ~--~~~~l----~~~~DaV~latGa 405 (639)
T PRK12809 387 I--TFSDL----TSEYDAVFIGVGT 405 (639)
T ss_pred C--CHHHH----HhcCCEEEEeCCC
Confidence 0 12222 1369999999996
No 448
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=96.61 E-value=0.042 Score=43.37 Aligned_cols=81 Identities=15% Similarity=0.153 Sum_probs=49.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEc-CChHHHHHH-HH----cCCC-EEEeCCC-CcccHHHHHHHHHHHc
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVD-VDDYRLSVA-KK----LGAD-NIVKVST-NLQDIAEEVEKIQKAM 165 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~-~~~~~~~~~-~~----~g~~-~~~~~~~-~~~~~~~~~~~~~~~~ 165 (216)
++++++|.|+ +++|..+++.+...|++ |+.+. +++++.+.. ++ .+.. ..+..|- +.++..+.+.++.+..
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVN-IAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDF 85 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 5789999996 89999999999999996 66654 455443322 22 2332 1222222 2233444444443333
Q ss_pred CCCccEEEEcCC
Q 048013 166 GTGIDVSFDCAG 177 (216)
Q Consensus 166 ~~~~d~vi~~~g 177 (216)
..+|+++.++|
T Consensus 86 -g~id~lv~nAg 96 (260)
T PRK08416 86 -DRVDFFISNAI 96 (260)
T ss_pred -CCccEEEECcc
Confidence 46999999885
No 449
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.61 E-value=0.16 Score=39.91 Aligned_cols=108 Identities=16% Similarity=0.145 Sum_probs=63.0
Q ss_pred CCCCEEEEEcCC---HHHHHHHHHHHHcCCCeEEEEcCC-----------hHHH----HHHHHcCCCE-EEeCC-CCccc
Q 048013 94 GPETNVLIMGSG---PIGLVTMLAARAFGAPRIVIVDVD-----------DYRL----SVAKKLGADN-IVKVS-TNLQD 153 (216)
Q Consensus 94 ~~~~~vlv~Gag---~~G~~~i~~a~~~g~~~vv~~~~~-----------~~~~----~~~~~~g~~~-~~~~~-~~~~~ 153 (216)
-+++++||+|++ ++|..+++.+...|++ |+++.++ .++. +.+++.+... .+..+ .+.++
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~-vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~ 82 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEAGAD-IFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDA 82 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHHCCCe-EEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence 357899999973 8999999999999996 6665321 1111 2233345432 22222 12233
Q ss_pred HHHHHHHHHHHcCCCccEEEEcCCCH-------------------------HHHHHHHHHhh--cCCEEEEeccCCC
Q 048013 154 IAEEVEKIQKAMGTGIDVSFDCAGFN-------------------------KTMSTALSATR--AGGKVCLVGMGHR 203 (216)
Q Consensus 154 ~~~~~~~~~~~~~~~~d~vi~~~g~~-------------------------~~~~~~~~~l~--~~G~~v~~g~~~~ 203 (216)
..+.+.++.+..+ .+|++|.++|.. ...+..++.++ .+|+++.++....
T Consensus 83 i~~~~~~~~~~~g-~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~ 158 (256)
T PRK12859 83 PKELLNKVTEQLG-YPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQF 158 (256)
T ss_pred HHHHHHHHHHHcC-CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEccccc
Confidence 4444444443333 689999998741 01244455664 3579999886554
No 450
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=96.60 E-value=0.042 Score=48.62 Aligned_cols=94 Identities=13% Similarity=0.140 Sum_probs=65.3
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEEcC
Q 048013 97 TNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 176 (216)
Q Consensus 97 ~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 176 (216)
++++|.|.|.+|+..++.++..|.+ ++++|.++++.+.+++.+...+.- |..+ .+.+++. .-..+|.++-++
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~~-vvvId~d~~~~~~~~~~g~~~i~G-D~~~---~~~L~~a---~i~~a~~viv~~ 489 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGIP-LVVIETSRTRVDELRERGIRAVLG-NAAN---EEIMQLA---HLDCARWLLLTI 489 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCCC-EEEEECCHHHHHHHHHCCCeEEEc-CCCC---HHHHHhc---CccccCEEEEEc
Confidence 6789999999999999999999986 999999999999998887665543 2222 2223322 224689888887
Q ss_pred CCHHH---HHHHHHHhhcCCEEEEe
Q 048013 177 GFNKT---MSTALSATRAGGKVCLV 198 (216)
Q Consensus 177 g~~~~---~~~~~~~l~~~G~~v~~ 198 (216)
++++. .-...+...++.+++.-
T Consensus 490 ~~~~~~~~iv~~~~~~~~~~~iiar 514 (558)
T PRK10669 490 PNGYEAGEIVASAREKRPDIEIIAR 514 (558)
T ss_pred CChHHHHHHHHHHHHHCCCCeEEEE
Confidence 76332 22334555666666644
No 451
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.59 E-value=0.11 Score=42.54 Aligned_cols=107 Identities=18% Similarity=0.181 Sum_probs=67.7
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HHc----CCCEEEe--CCC-CcccHHHHHHHHHHH
Q 048013 94 GPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KKL----GADNIVK--VST-NLQDIAEEVEKIQKA 164 (216)
Q Consensus 94 ~~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~~----g~~~~~~--~~~-~~~~~~~~~~~~~~~ 164 (216)
-.+.+++|+|+ +++|..++..+...|++ |+...++.++-+.+ +++ ....++. .|- +.....+...++. .
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La~~Ga~-Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~-~ 110 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELALRGAH-VVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFK-K 110 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHHhCCCE-EEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHH-h
Confidence 35578999997 89999999999999985 88888997654443 222 2233221 111 1122222333332 3
Q ss_pred cCCCccEEEEcCCCH-----------------------HHHHHHHHHhhcC--CEEEEeccCC
Q 048013 165 MGTGIDVSFDCAGFN-----------------------KTMSTALSATRAG--GKVCLVGMGH 202 (216)
Q Consensus 165 ~~~~~d~vi~~~g~~-----------------------~~~~~~~~~l~~~--G~~v~~g~~~ 202 (216)
...+.|+.|+++|.- -..+.+++.|+.. +|+|.++...
T Consensus 111 ~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~ 173 (314)
T KOG1208|consen 111 KEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSIL 173 (314)
T ss_pred cCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCcc
Confidence 456899999998851 1345666777655 7999887543
No 452
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=96.59 E-value=0.032 Score=45.89 Aligned_cols=94 Identities=13% Similarity=0.110 Sum_probs=62.4
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEE----eCCC---CcccHHHHHHHHHHHcCCC
Q 048013 96 ETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIV----KVST---NLQDIAEEVEKIQKAMGTG 168 (216)
Q Consensus 96 ~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~----~~~~---~~~~~~~~~~~~~~~~~~~ 168 (216)
..+|.|+|+|.+|.+.+..+...|.+ |.+.++++++.+.+.+.+..... .... ...+ ..+. -..
T Consensus 4 ~m~I~iIG~G~mG~~ia~~L~~~G~~-V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~----~~e~----~~~ 74 (328)
T PRK14618 4 GMRVAVLGAGAWGTALAVLAASKGVP-VRLWARRPEFAAALAAERENREYLPGVALPAELYPTAD----PEEA----LAG 74 (328)
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCC----HHHH----HcC
Confidence 35789999999999999998888985 88999988877766553211100 0000 0011 1121 135
Q ss_pred ccEEEEcCCCHHHHHHHHHHhhcCCEEEEec
Q 048013 169 IDVSFDCAGFNKTMSTALSATRAGGKVCLVG 199 (216)
Q Consensus 169 ~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g 199 (216)
.|+||-++... .++.+++.++++-.++.+.
T Consensus 75 aD~Vi~~v~~~-~~~~v~~~l~~~~~vi~~~ 104 (328)
T PRK14618 75 ADFAVVAVPSK-ALRETLAGLPRALGYVSCA 104 (328)
T ss_pred CCEEEEECchH-HHHHHHHhcCcCCEEEEEe
Confidence 89999999994 4577778888876666553
No 453
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.58 E-value=0.016 Score=46.55 Aligned_cols=84 Identities=15% Similarity=0.191 Sum_probs=59.4
Q ss_pred HHHHcC-CCCCCEEEEEcCCH-HHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 048013 87 ACRRAN-IGPETNVLIMGSGP-IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKA 164 (216)
Q Consensus 87 ~l~~~~-~~~~~~vlv~Gag~-~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 164 (216)
.++..+ --.|++++|+|.|. +|.-++.++...|+. |++..+.. .+ +.+..
T Consensus 148 ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gat-Vtv~~s~t---------------------~~----l~~~~-- 199 (286)
T PRK14175 148 ILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNAS-VTILHSRS---------------------KD----MASYL-- 199 (286)
T ss_pred HHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCe-EEEEeCCc---------------------hh----HHHHH--
Confidence 334443 35789999999865 999999999999995 66665421 11 11211
Q ss_pred cCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCC
Q 048013 165 MGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 165 ~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
+..|++|.++|.+..+.. ..++++..++.+|.+.
T Consensus 200 --~~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~~ 233 (286)
T PRK14175 200 --KDADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNTP 233 (286)
T ss_pred --hhCCEEEECCCCCcccCH--HHcCCCcEEEEcCCCc
Confidence 258999999998666544 4578899999999765
No 454
>PRK07775 short chain dehydrogenase; Provisional
Probab=96.58 E-value=0.039 Score=43.99 Aligned_cols=82 Identities=18% Similarity=0.206 Sum_probs=49.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH----HHcCCCE-EEeCCCC-cccHHHHHHHHHHHcCC
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KKLGADN-IVKVSTN-LQDIAEEVEKIQKAMGT 167 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~----~~~g~~~-~~~~~~~-~~~~~~~~~~~~~~~~~ 167 (216)
+.++++|+|+ |.+|..+++.+...|++ |+++.++.++.+.. +..+... .+..+-. .++..+.+.++.+. -.
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~ 86 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGFP-VALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEA-LG 86 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHh-cC
Confidence 3468999996 99999999988889994 87887776654432 2233322 1122221 22233333333222 24
Q ss_pred CccEEEEcCCC
Q 048013 168 GIDVSFDCAGF 178 (216)
Q Consensus 168 ~~d~vi~~~g~ 178 (216)
++|++|.++|.
T Consensus 87 ~id~vi~~Ag~ 97 (274)
T PRK07775 87 EIEVLVSGAGD 97 (274)
T ss_pred CCCEEEECCCc
Confidence 68999999875
No 455
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=96.58 E-value=0.015 Score=50.30 Aligned_cols=77 Identities=21% Similarity=0.334 Sum_probs=52.4
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh---------------------HHHHHHHHcCCCEEEeCCCCccc
Q 048013 95 PETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDD---------------------YRLSVAKKLGADNIVKVSTNLQD 153 (216)
Q Consensus 95 ~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~---------------------~~~~~~~~~g~~~~~~~~~~~~~ 153 (216)
.+++|+|+|+|+.|+.++..++..|.+ |+++++.+ ...+.++++|.+...+... ..+
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~G~~-V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v-~~~ 217 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARAGVQ-VVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEV-GRD 217 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCe-EEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEe-CCc
Confidence 578999999999999999999999996 77787653 2345667788765433111 011
Q ss_pred HHHHHHHHHHHcCCCccEEEEcCCCH
Q 048013 154 IAEEVEKIQKAMGTGIDVSFDCAGFN 179 (216)
Q Consensus 154 ~~~~~~~~~~~~~~~~d~vi~~~g~~ 179 (216)
. .+.++. .++|.+|.++|..
T Consensus 218 ~--~~~~~~----~~~D~vilAtGa~ 237 (467)
T TIGR01318 218 I--SLDDLL----EDYDAVFLGVGTY 237 (467)
T ss_pred c--CHHHHH----hcCCEEEEEeCCC
Confidence 1 112221 2699999999973
No 456
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=96.56 E-value=0.048 Score=39.89 Aligned_cols=87 Identities=17% Similarity=0.221 Sum_probs=54.0
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChH-HHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEE
Q 048013 95 PETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDY-RLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 173 (216)
Q Consensus 95 ~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 173 (216)
.+++|.|+|.|.-|++.++-++-.|.+ |++..++.. ..+.+++-|.... +..+.+ ...|+|+
T Consensus 3 ~~k~IAViGyGsQG~a~AlNLrDSG~~-V~Vglr~~s~s~~~A~~~Gf~v~--------~~~eAv--------~~aDvV~ 65 (165)
T PF07991_consen 3 KGKTIAVIGYGSQGHAHALNLRDSGVN-VIVGLREGSASWEKAKADGFEVM--------SVAEAV--------KKADVVM 65 (165)
T ss_dssp CTSEEEEES-SHHHHHHHHHHHHCC-E-EEEEE-TTCHHHHHHHHTT-ECC--------EHHHHH--------HC-SEEE
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCCC-EEEEecCCCcCHHHHHHCCCeec--------cHHHHH--------hhCCEEE
Confidence 578999999999999999999999996 555555554 7788888887531 222222 2589999
Q ss_pred EcCCCH---HHH-HHHHHHhhcCCEEEEe
Q 048013 174 DCAGFN---KTM-STALSATRAGGKVCLV 198 (216)
Q Consensus 174 ~~~g~~---~~~-~~~~~~l~~~G~~v~~ 198 (216)
-.+.+. +.+ +.....|+++-.+++.
T Consensus 66 ~L~PD~~q~~vy~~~I~p~l~~G~~L~fa 94 (165)
T PF07991_consen 66 LLLPDEVQPEVYEEEIAPNLKPGATLVFA 94 (165)
T ss_dssp E-S-HHHHHHHHHHHHHHHS-TT-EEEES
T ss_pred EeCChHHHHHHHHHHHHhhCCCCCEEEeC
Confidence 989872 233 4455577777766643
No 457
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=96.56 E-value=0.1 Score=42.30 Aligned_cols=43 Identities=19% Similarity=0.158 Sum_probs=36.0
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCC
Q 048013 98 NVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGA 141 (216)
Q Consensus 98 ~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~ 141 (216)
+|.++|.|.+|...+..+...|.+ |++.+++.++.+.+.+.+.
T Consensus 2 ~Ig~IGlG~mG~~la~~L~~~g~~-V~~~dr~~~~~~~l~~~g~ 44 (298)
T TIGR00872 2 QLGLIGLGRMGANIVRRLAKRGHD-CVGYDHDQDAVKAMKEDRT 44 (298)
T ss_pred EEEEEcchHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHcCC
Confidence 578899999999988888888885 8889999998887776553
No 458
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=96.56 E-value=0.028 Score=43.99 Aligned_cols=80 Identities=16% Similarity=0.277 Sum_probs=49.7
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH----HHcCCCE-EEeCCC-CcccHHHHHHHHHHHcCCCc
Q 048013 97 TNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA----KKLGADN-IVKVST-NLQDIAEEVEKIQKAMGTGI 169 (216)
Q Consensus 97 ~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~----~~~g~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~ 169 (216)
++++|.|+ |++|..+++.+...|++ ++.+++++++.+.+ ++.+... .+..+- +.+...+.+.++.+.. .++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~-~~i 78 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFA-VAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKF-GGF 78 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-CCC
Confidence 46899986 99999999999999995 88888886654332 2233322 122111 2223333344443323 368
Q ss_pred cEEEEcCCC
Q 048013 170 DVSFDCAGF 178 (216)
Q Consensus 170 d~vi~~~g~ 178 (216)
|++|.++|.
T Consensus 79 d~vi~~ag~ 87 (254)
T TIGR02415 79 DVMVNNAGV 87 (254)
T ss_pred CEEEECCCc
Confidence 999999874
No 459
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.55 E-value=0.011 Score=43.80 Aligned_cols=44 Identities=27% Similarity=0.336 Sum_probs=37.5
Q ss_pred CCCEEEEEcCC-HHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHc
Q 048013 95 PETNVLIMGSG-PIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKL 139 (216)
Q Consensus 95 ~~~~vlv~Gag-~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~ 139 (216)
.|..|++.|+| ++|..+++-+...|++ |+++.++++.+..+-+.
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA~-ViAvaR~~a~L~sLV~e 50 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQ-VIAVARNEANLLSLVKE 50 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCCE-EEEEecCHHHHHHHHhh
Confidence 67889999974 8999999999999995 99999999988766443
No 460
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.55 E-value=0.038 Score=43.74 Aligned_cols=106 Identities=17% Similarity=0.218 Sum_probs=63.8
Q ss_pred CCCEEEEEcC---CHHHHHHHHHHHHcCCCeEEEEcCC---hHHHHHH-HHcCCCEEEeCC-CCcccHHHHHHHHHHHcC
Q 048013 95 PETNVLIMGS---GPIGLVTMLAARAFGAPRIVIVDVD---DYRLSVA-KKLGADNIVKVS-TNLQDIAEEVEKIQKAMG 166 (216)
Q Consensus 95 ~~~~vlv~Ga---g~~G~~~i~~a~~~g~~~vv~~~~~---~~~~~~~-~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~ 166 (216)
.+++++|.|+ +++|.++++.+...|++ |+.+++. +++.+.+ ++++....+..| .+.++..+.+.++.+..
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~- 82 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAE-LAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHW- 82 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCe-EEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHh-
Confidence 5788999983 58999999998889996 7666433 3333332 334433222222 22234444455544333
Q ss_pred CCccEEEEcCCCH---------------H---------------HHHHHHHHhhcCCEEEEeccCC
Q 048013 167 TGIDVSFDCAGFN---------------K---------------TMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 167 ~~~d~vi~~~g~~---------------~---------------~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
+++|++++++|.. + ..+.+++.|+.+|+++.++...
T Consensus 83 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~ 148 (260)
T PRK06997 83 DGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLG 148 (260)
T ss_pred CCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccc
Confidence 4799999988631 0 1344556666678988887543
No 461
>PF01564 Spermine_synth: Spermine/spermidine synthase; InterPro: IPR001045 Synonym(s): Spermidine aminopropyltransferase A group of polyamine biosynthetic enzymes involved in the fifth (last) step in the biosynthesis of spermidine from arginine and methionine which includes; spermidine synthase (2.5.1.16 from EC), spermine synthase (2.5.1.22 from EC) and putrescine N-methyltransferase (2.1.1.53 from EC) []. The Thermotoga maritima spermidine synthase monomer consists of two domains: an N-terminal domain composed of six beta-strands, and a Rossmann-like C- terminal domain []. The larger C-terminal catalytic core domain consists of a seven-stranded beta-sheet flanked by nine alpha helices. This domain resembles a topology observed in a number of nucleotide and dinucleotide-binding enzymes, and in S-adenosyl-L-methionine (AdoMet)- dependent methyltransferase (MTases) [].; GO: 0003824 catalytic activity; PDB: 2E5W_C 2ZSU_E 2O0L_B 2O05_B 2O06_B 2O07_B 3RW9_B 2PWP_A 2HTE_B 3RIE_B ....
Probab=96.54 E-value=0.013 Score=46.20 Aligned_cols=96 Identities=18% Similarity=0.172 Sum_probs=60.6
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCC---------C-EEEeCCCCcccHHHHHHHHHH
Q 048013 94 GPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGA---------D-NIVKVSTNLQDIAEEVEKIQK 163 (216)
Q Consensus 94 ~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~---------~-~~~~~~~~~~~~~~~~~~~~~ 163 (216)
.+.++|||+|.|. |..+-.+++......+.+++.+++-.+.++++-. . .++. .|..+.+++
T Consensus 75 ~~p~~VLiiGgG~-G~~~~ell~~~~~~~i~~VEiD~~Vv~~a~~~f~~~~~~~~d~r~~i~~-----~Dg~~~l~~--- 145 (246)
T PF01564_consen 75 PNPKRVLIIGGGD-GGTARELLKHPPVESITVVEIDPEVVELARKYFPEFSEGLDDPRVRIII-----GDGRKFLKE--- 145 (246)
T ss_dssp SST-EEEEEESTT-SHHHHHHTTSTT-SEEEEEES-HHHHHHHHHHTHHHHTTGGSTTEEEEE-----STHHHHHHT---
T ss_pred CCcCceEEEcCCC-hhhhhhhhhcCCcceEEEEecChHHHHHHHHhchhhccccCCCceEEEE-----hhhHHHHHh---
Confidence 4689999998654 4455566665555679999999998888876421 1 1221 233333433
Q ss_pred HcCC-CccEEEE-cCC---------CHHHHHHHHHHhhcCCEEEEec
Q 048013 164 AMGT-GIDVSFD-CAG---------FNKTMSTALSATRAGGKVCLVG 199 (216)
Q Consensus 164 ~~~~-~~d~vi~-~~g---------~~~~~~~~~~~l~~~G~~v~~g 199 (216)
... .+|++|. ... ..+.++.+.+.|+++|.++.-.
T Consensus 146 -~~~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~~Gv~v~~~ 191 (246)
T PF01564_consen 146 -TQEEKYDVIIVDLTDPDGPAPNLFTREFYQLCKRRLKPDGVLVLQA 191 (246)
T ss_dssp -SSST-EEEEEEESSSTTSCGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred -ccCCcccEEEEeCCCCCCCcccccCHHHHHHHHhhcCCCcEEEEEc
Confidence 344 8999874 433 1367889999999999998765
No 462
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=96.54 E-value=0.066 Score=40.73 Aligned_cols=93 Identities=22% Similarity=0.212 Sum_probs=56.9
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChH-------------------H----HHHHHHcCCCEEEeCCCCc
Q 048013 95 PETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDY-------------------R----LSVAKKLGADNIVKVSTNL 151 (216)
Q Consensus 95 ~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~-------------------~----~~~~~~~g~~~~~~~~~~~ 151 (216)
...+|+|+|+|++|.-+++.+...|...+..+|.+.- | .+.++++..+..+....
T Consensus 20 ~~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~-- 97 (197)
T cd01492 20 RSARILLIGLKGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDT-- 97 (197)
T ss_pred HhCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEe--
Confidence 4577999999999999999999999998888875521 1 12244555543322111
Q ss_pred ccHHHHHHHHHHHcCCCccEEEEcCCCHHHHHHHHHHhhcCC
Q 048013 152 QDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGG 193 (216)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G 193 (216)
+...+...++ -.++|+|+++..+.+.....-+.+...+
T Consensus 98 ~~~~~~~~~~----~~~~dvVi~~~~~~~~~~~ln~~c~~~~ 135 (197)
T cd01492 98 DDISEKPEEF----FSQFDVVVATELSRAELVKINELCRKLG 135 (197)
T ss_pred cCccccHHHH----HhCCCEEEECCCCHHHHHHHHHHHHHcC
Confidence 1111111121 2369999999988555444445555554
No 463
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=96.53 E-value=0.036 Score=49.66 Aligned_cols=95 Identities=16% Similarity=0.167 Sum_probs=66.5
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEEc
Q 048013 96 ETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 175 (216)
Q Consensus 96 ~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 175 (216)
.++++|.|.|.+|+.+++.++..|.+ ++++|.++++.+.+++.|....+- |..+.+ .+++ .+-...|.++-+
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~~-vvvID~d~~~v~~~~~~g~~v~~G-Dat~~~---~L~~---agi~~A~~vvv~ 471 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGVK-MTVLDHDPDHIETLRKFGMKVFYG-DATRMD---LLES---AGAAKAEVLINA 471 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCCC-EEEEECCHHHHHHHHhcCCeEEEE-eCCCHH---HHHh---cCCCcCCEEEEE
Confidence 36799999999999999999999996 999999999999998888764433 222222 2322 233568999999
Q ss_pred CCCHHHHHHH---HHHhhcCCEEEEe
Q 048013 176 AGFNKTMSTA---LSATRAGGKVCLV 198 (216)
Q Consensus 176 ~g~~~~~~~~---~~~l~~~G~~v~~ 198 (216)
+++++..... .+.+.|+-+++.-
T Consensus 472 ~~d~~~n~~i~~~ar~~~p~~~iiaR 497 (621)
T PRK03562 472 IDDPQTSLQLVELVKEHFPHLQIIAR 497 (621)
T ss_pred eCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence 9985543333 3344566555543
No 464
>PRK08303 short chain dehydrogenase; Provisional
Probab=96.53 E-value=0.046 Score=44.47 Aligned_cols=81 Identities=17% Similarity=0.245 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCh----------HHHH----HHHHcCCCE-EEeCC-CCcccHHHH
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDD----------YRLS----VAKKLGADN-IVKVS-TNLQDIAEE 157 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~----------~~~~----~~~~~g~~~-~~~~~-~~~~~~~~~ 157 (216)
.+++++|.|+ +++|.++++.+...|++ |++++++. ++.+ .++..+... .+..+ .+.++..+.
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~ 85 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGAT-VYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRAL 85 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence 4789999996 89999999999999995 88887763 2222 223334322 12211 122344444
Q ss_pred HHHHHHHcCCCccEEEEcC-C
Q 048013 158 VEKIQKAMGTGIDVSFDCA-G 177 (216)
Q Consensus 158 ~~~~~~~~~~~~d~vi~~~-g 177 (216)
+.++.+.. +++|++|+++ |
T Consensus 86 ~~~~~~~~-g~iDilVnnA~g 105 (305)
T PRK08303 86 VERIDREQ-GRLDILVNDIWG 105 (305)
T ss_pred HHHHHHHc-CCccEEEECCcc
Confidence 45544333 3699999988 5
No 465
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=96.53 E-value=0.069 Score=42.04 Aligned_cols=101 Identities=20% Similarity=0.294 Sum_probs=64.2
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCC-EEEeCCCCcccHHHHHHHHHHHcCC
Q 048013 89 RRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGAD-NIVKVSTNLQDIAEEVEKIQKAMGT 167 (216)
Q Consensus 89 ~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (216)
+.....++.+||.+|+|. |..+..+++ .|. .++++|.+++.++.+++.... ..+. .+. .++. ....
T Consensus 36 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~~~D~s~~~l~~a~~~~~~~~~~~-----~d~----~~~~-~~~~ 102 (251)
T PRK10258 36 AMLPQRKFTHVLDAGCGP-GWMSRYWRE-RGS-QVTALDLSPPMLAQARQKDAADHYLA-----GDI----ESLP-LATA 102 (251)
T ss_pred HhcCccCCCeEEEeeCCC-CHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCCCCCEEE-----cCc----ccCc-CCCC
Confidence 333444678899999875 655555554 566 599999999888887664322 1111 111 1110 1234
Q ss_pred CccEEEEcCCC------HHHHHHHHHHhhcCCEEEEeccCC
Q 048013 168 GIDVSFDCAGF------NKTMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 168 ~~d~vi~~~g~------~~~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
.||+|+....- ...+..+.+.|+|+|.++......
T Consensus 103 ~fD~V~s~~~l~~~~d~~~~l~~~~~~Lk~gG~l~~~~~~~ 143 (251)
T PRK10258 103 TFDLAWSNLAVQWCGNLSTALRELYRVVRPGGVVAFTTLVQ 143 (251)
T ss_pred cEEEEEECchhhhcCCHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 69999975432 245788899999999998775433
No 466
>PF13847 Methyltransf_31: Methyltransferase domain; PDB: 3T0I_B 3SVZ_B 3SXJ_A 3F4K_A 3GU3_B 2GH1_A 1R8Y_E 1R8X_B 2B3T_A 1T43_A ....
Probab=96.52 E-value=0.027 Score=40.76 Aligned_cols=98 Identities=24% Similarity=0.415 Sum_probs=63.4
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHc--CCCeEEEEcCChHHHHHHHH----cCCCEEEeCCCCcccHHHHHHHHHHHcCC
Q 048013 94 GPETNVLIMGSGPIGLVTMLAARAF--GAPRIVIVDVDDYRLSVAKK----LGADNIVKVSTNLQDIAEEVEKIQKAMGT 167 (216)
Q Consensus 94 ~~~~~vlv~Gag~~G~~~i~~a~~~--g~~~vv~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (216)
+.+.+||-+|+|. |.....+++.. +. .++.+|.+++..+.+++ ++...+..+.. ++.+ +.+ ....
T Consensus 2 ~~~~~iLDlGcG~-G~~~~~l~~~~~~~~-~i~gvD~s~~~i~~a~~~~~~~~~~ni~~~~~---d~~~-l~~---~~~~ 72 (152)
T PF13847_consen 2 KSNKKILDLGCGT-GRLLIQLAKELNPGA-KIIGVDISEEMIEYAKKRAKELGLDNIEFIQG---DIED-LPQ---ELEE 72 (152)
T ss_dssp TTTSEEEEET-TT-SHHHHHHHHHSTTTS-EEEEEESSHHHHHHHHHHHHHTTSTTEEEEES---BTTC-GCG---CSST
T ss_pred CCCCEEEEecCcC-cHHHHHHHHhcCCCC-EEEEEECcHHHHHHhhcccccccccccceEEe---ehhc-ccc---ccCC
Confidence 4678899999864 66777777544 44 69999999988777654 56653322212 2111 110 0015
Q ss_pred CccEEEEcCC-----C-HHHHHHHHHHhhcCCEEEEecc
Q 048013 168 GIDVSFDCAG-----F-NKTMSTALSATRAGGKVCLVGM 200 (216)
Q Consensus 168 ~~d~vi~~~g-----~-~~~~~~~~~~l~~~G~~v~~g~ 200 (216)
.+|+|+.... . ...++.+.+.|+++|+++..-.
T Consensus 73 ~~D~I~~~~~l~~~~~~~~~l~~~~~~lk~~G~~i~~~~ 111 (152)
T PF13847_consen 73 KFDIIISNGVLHHFPDPEKVLKNIIRLLKPGGILIISDP 111 (152)
T ss_dssp TEEEEEEESTGGGTSHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CeeEEEEcCchhhccCHHHHHHHHHHHcCCCcEEEEEEC
Confidence 7999998632 2 2467889999999999886653
No 467
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=96.50 E-value=0.055 Score=46.09 Aligned_cols=97 Identities=18% Similarity=0.187 Sum_probs=61.2
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHH-------HcCCCc
Q 048013 97 TNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQK-------AMGTGI 169 (216)
Q Consensus 97 ~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ 169 (216)
.+|.|+|.|-+|..++..+...|.+ |+++|+++++.+.+.. |.... ...+..+.+.+..+ +.-...
T Consensus 4 ~kI~VIGlG~~G~~~A~~La~~G~~-V~~~D~~~~~v~~l~~-g~~~~-----~e~~l~~~l~~~~~~g~l~~~~~~~~a 76 (415)
T PRK11064 4 ETISVIGLGYIGLPTAAAFASRQKQ-VIGVDINQHAVDTINR-GEIHI-----VEPDLDMVVKTAVEGGYLRATTTPEPA 76 (415)
T ss_pred cEEEEECcchhhHHHHHHHHhCCCE-EEEEeCCHHHHHHHHC-CCCCc-----CCCCHHHHHHHHhhcCceeeecccccC
Confidence 5789999999999988888888985 9999999998887543 33211 12333333332211 012368
Q ss_pred cEEEEcCCCH---------HHHH----HHHHHhhcCCEEEEecc
Q 048013 170 DVSFDCAGFN---------KTMS----TALSATRAGGKVCLVGM 200 (216)
Q Consensus 170 d~vi~~~g~~---------~~~~----~~~~~l~~~G~~v~~g~ 200 (216)
|++|-|++.+ ..+. ...+.++++..++..+.
T Consensus 77 Dvvii~vptp~~~~~~~dl~~v~~~~~~i~~~l~~g~iVI~~ST 120 (415)
T PRK11064 77 DAFLIAVPTPFKGDHEPDLTYVEAAAKSIAPVLKKGDLVILEST 120 (415)
T ss_pred CEEEEEcCCCCCCCCCcChHHHHHHHHHHHHhCCCCCEEEEeCC
Confidence 9999999974 2333 33444555555555553
No 468
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=96.50 E-value=0.0093 Score=42.01 Aligned_cols=80 Identities=18% Similarity=0.188 Sum_probs=48.7
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEE-cCChHHHHHHHH-cCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEE
Q 048013 96 ETNVLIMGSGPIGLVTMLAARAFGAPRIVIV-DVDDYRLSVAKK-LGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 173 (216)
Q Consensus 96 ~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~-~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 173 (216)
.-+|-|+|+|.+|......++..|.. |..+ .++.++.+.+.. ++.....+.. + .-...|++|
T Consensus 10 ~l~I~iIGaGrVG~~La~aL~~ag~~-v~~v~srs~~sa~~a~~~~~~~~~~~~~-----------~----~~~~aDlv~ 73 (127)
T PF10727_consen 10 RLKIGIIGAGRVGTALARALARAGHE-VVGVYSRSPASAERAAAFIGAGAILDLE-----------E----ILRDADLVF 73 (127)
T ss_dssp --EEEEECTSCCCCHHHHHHHHTTSE-EEEESSCHH-HHHHHHC--TT-----TT-----------G----GGCC-SEEE
T ss_pred ccEEEEECCCHHHHHHHHHHHHCCCe-EEEEEeCCcccccccccccccccccccc-----------c----ccccCCEEE
Confidence 35789999999999999999999985 6665 566656666654 3433322211 1 124689999
Q ss_pred EcCCCHHHHHHHHHHhhcC
Q 048013 174 DCAGFNKTMSTALSATRAG 192 (216)
Q Consensus 174 ~~~g~~~~~~~~~~~l~~~ 192 (216)
-++.+ +.+..+++.|...
T Consensus 74 iavpD-daI~~va~~La~~ 91 (127)
T PF10727_consen 74 IAVPD-DAIAEVAEQLAQY 91 (127)
T ss_dssp E-S-C-CHHHHHHHHHHCC
T ss_pred EEech-HHHHHHHHHHHHh
Confidence 99999 5667777777644
No 469
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=96.50 E-value=0.21 Score=40.42 Aligned_cols=60 Identities=25% Similarity=0.387 Sum_probs=45.7
Q ss_pred HHHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEE--cCChHHHHHHHHcCCCEEEe
Q 048013 87 ACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIV--DVDDYRLSVAKKLGADNIVK 146 (216)
Q Consensus 87 ~l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~--~~~~~~~~~~~~~g~~~~~~ 146 (216)
+.+...+++|.+|+=--+|++|++.+.+|+.+|++.++++ ..+.+++++++.+|+..+..
T Consensus 53 Ae~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t 114 (300)
T COG0031 53 AEKRGLLKPGGTIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILT 114 (300)
T ss_pred HHHcCCCCCCCEEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEc
Confidence 3344568999965543369999999999999999855555 45678888999999987665
No 470
>PRK08278 short chain dehydrogenase; Provisional
Probab=96.49 E-value=0.042 Score=43.81 Aligned_cols=82 Identities=24% Similarity=0.298 Sum_probs=50.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHH-------HH----HHHHcCCCE-EEeCC-CCcccHHHHHHH
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYR-------LS----VAKKLGADN-IVKVS-TNLQDIAEEVEK 160 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~-------~~----~~~~~g~~~-~~~~~-~~~~~~~~~~~~ 160 (216)
.+++++|+|+ |++|..+++.+...|++ |++++++.+. ++ .+++.+... .+..+ .+.+...+.+.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~ 83 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGAN-IVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAK 83 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence 4678999996 89999999999889995 8888876532 11 122333332 11111 122333344444
Q ss_pred HHHHcCCCccEEEEcCCC
Q 048013 161 IQKAMGTGIDVSFDCAGF 178 (216)
Q Consensus 161 ~~~~~~~~~d~vi~~~g~ 178 (216)
+.+.. ..+|++|.++|.
T Consensus 84 ~~~~~-g~id~li~~ag~ 100 (273)
T PRK08278 84 AVERF-GGIDICVNNASA 100 (273)
T ss_pred HHHHh-CCCCEEEECCCC
Confidence 43323 369999999884
No 471
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=96.48 E-value=0.15 Score=41.45 Aligned_cols=43 Identities=19% Similarity=0.138 Sum_probs=36.0
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCC
Q 048013 98 NVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGA 141 (216)
Q Consensus 98 ~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~ 141 (216)
+|.++|.|.+|...+.-+...|.+ +++.++++++.+.+.+.|.
T Consensus 2 ~Ig~IGlG~MG~~mA~~L~~~g~~-v~v~dr~~~~~~~~~~~g~ 44 (301)
T PRK09599 2 QLGMIGLGRMGGNMARRLLRGGHE-VVGYDRNPEAVEALAEEGA 44 (301)
T ss_pred EEEEEcccHHHHHHHHHHHHCCCe-EEEEECCHHHHHHHHHCCC
Confidence 578899999999998888888985 8899999988877766554
No 472
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=96.48 E-value=0.01 Score=42.84 Aligned_cols=93 Identities=16% Similarity=0.160 Sum_probs=55.0
Q ss_pred EEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCC----CCcccHHHHHHHHHHHcCCCccEEEE
Q 048013 99 VLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVS----TNLQDIAEEVEKIQKAMGTGIDVSFD 174 (216)
Q Consensus 99 vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~d~vi~ 174 (216)
|+|+|+|++|.+.+..++..|.+ |..+.+.+ +.+.+++-|........ ......... . .....+|++|-
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~~-V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~D~viv 73 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGHD-VTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP-S----ADAGPYDLVIV 73 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTCE-EEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH-G----HHHSTESEEEE
T ss_pred CEEECcCHHHHHHHHHHHHCCCc-eEEEEccc-cHHhhhheeEEEEecccceecccccccCcc-h----hccCCCcEEEE
Confidence 68899999999999888888885 88888877 66666654443211100 000000000 0 12457999999
Q ss_pred cCCCHH---HHHHHHHHhhcCCEEEEe
Q 048013 175 CAGFNK---TMSTALSATRAGGKVCLV 198 (216)
Q Consensus 175 ~~g~~~---~~~~~~~~l~~~G~~v~~ 198 (216)
|+-..+ .++.+.+.+.++..++.+
T Consensus 74 ~vKa~~~~~~l~~l~~~~~~~t~iv~~ 100 (151)
T PF02558_consen 74 AVKAYQLEQALQSLKPYLDPNTTIVSL 100 (151)
T ss_dssp -SSGGGHHHHHHHHCTGEETTEEEEEE
T ss_pred EecccchHHHHHHHhhccCCCcEEEEE
Confidence 997632 333444445556566655
No 473
>PRK08223 hypothetical protein; Validated
Probab=96.47 E-value=0.076 Score=42.72 Aligned_cols=36 Identities=28% Similarity=0.469 Sum_probs=31.5
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 048013 95 PETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDD 130 (216)
Q Consensus 95 ~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~ 130 (216)
...+|+|+|+|++|..+++.+.+.|..++..+|.+.
T Consensus 26 ~~s~VlIvG~GGLGs~va~~LA~aGVG~i~lvD~D~ 61 (287)
T PRK08223 26 RNSRVAIAGLGGVGGIHLLTLARLGIGKFTIADFDV 61 (287)
T ss_pred hcCCEEEECCCHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 457899999999999999999999999888887663
No 474
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.47 E-value=0.018 Score=46.36 Aligned_cols=84 Identities=12% Similarity=0.150 Sum_probs=58.2
Q ss_pred HHHHcC-CCCCCEEEEEcCCH-HHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 048013 87 ACRRAN-IGPETNVLIMGSGP-IGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKA 164 (216)
Q Consensus 87 ~l~~~~-~~~~~~vlv~Gag~-~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 164 (216)
.++..+ .-.|++++|+|.|+ +|..++.++...|+ .|.+..+..+ + +.+.
T Consensus 149 ~L~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t~---------------------~----L~~~--- 199 (283)
T PRK14192 149 LLKAYNIELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRTQ---------------------N----LPEL--- 199 (283)
T ss_pred HHHHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCch---------------------h----HHHH---
Confidence 344433 35789999999876 99999999999999 5777754211 1 1111
Q ss_pred cCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCC
Q 048013 165 MGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 165 ~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
-+.+|++|+++|.+..+. .+.++++..++.+|+..
T Consensus 200 -~~~aDIvI~AtG~~~~v~--~~~lk~gavViDvg~n~ 234 (283)
T PRK14192 200 -VKQADIIVGAVGKPELIK--KDWIKQGAVVVDAGFHP 234 (283)
T ss_pred -hccCCEEEEccCCCCcCC--HHHcCCCCEEEEEEEee
Confidence 136899999998755332 35588999999998654
No 475
>PRK14902 16S rRNA methyltransferase B; Provisional
Probab=96.47 E-value=0.069 Score=45.87 Aligned_cols=102 Identities=20% Similarity=0.258 Sum_probs=62.3
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHHHc-CCCeEEEEcCChHHHHHHH----HcCCCEEEeCCCCcccHHHHHHHHHH
Q 048013 89 RRANIGPETNVLIMGSGPIGLVTMLAARAF-GAPRIVIVDVDDYRLSVAK----KLGADNIVKVSTNLQDIAEEVEKIQK 163 (216)
Q Consensus 89 ~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~-g~~~vv~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~ 163 (216)
....++++++||-.|+|+ |..++.+++.. +...|+++|.++++.+.++ ++|...+.... .|..+....
T Consensus 244 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~~v~avDi~~~~l~~~~~n~~~~g~~~v~~~~---~D~~~~~~~--- 316 (444)
T PRK14902 244 PALDPKGGDTVLDACAAP-GGKTTHIAELLKNTGKVVALDIHEHKLKLIEENAKRLGLTNIETKA---LDARKVHEK--- 316 (444)
T ss_pred HHhCCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEe---CCcccccch---
Confidence 345678889999998754 44555666655 2236999999998876653 45665432221 122111111
Q ss_pred HcCCCccEEEEc---CCC-------------------------HHHHHHHHHHhhcCCEEEEe
Q 048013 164 AMGTGIDVSFDC---AGF-------------------------NKTMSTALSATRAGGKVCLV 198 (216)
Q Consensus 164 ~~~~~~d~vi~~---~g~-------------------------~~~~~~~~~~l~~~G~~v~~ 198 (216)
....||.|+-. +|. ...+..+++.|+|+|+++..
T Consensus 317 -~~~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvys 378 (444)
T PRK14902 317 -FAEKFDKILVDAPCSGLGVIRRKPDIKYNKTKEDIESLQEIQLEILESVAQYLKKGGILVYS 378 (444)
T ss_pred -hcccCCEEEEcCCCCCCeeeccCcchhhcCCHHHHHHHHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 12469998752 221 13567788999999999843
No 476
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=96.46 E-value=0.028 Score=47.60 Aligned_cols=76 Identities=12% Similarity=0.250 Sum_probs=47.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HHcCCC-EEEeCCCCcccHHHHHHHHHHHcCCCccE
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KKLGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDV 171 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 171 (216)
.+++++|.|+ |++|.++++.+...|++ |+++++++++.+.. ...... ..+..+- .+. +.+.+. . .++|+
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~-Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dv--sd~-~~v~~~---l-~~IDi 248 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAK-VVALTSNSDKITLEINGEDLPVKTLHWQV--GQE-AALAEL---L-EKVDI 248 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHhhcCCCeEEEEeeC--CCH-HHHHHH---h-CCCCE
Confidence 4789999996 99999999988889995 88888877655332 211111 1221111 121 123322 1 36999
Q ss_pred EEEcCCC
Q 048013 172 SFDCAGF 178 (216)
Q Consensus 172 vi~~~g~ 178 (216)
+|.++|.
T Consensus 249 LInnAGi 255 (406)
T PRK07424 249 LIINHGI 255 (406)
T ss_pred EEECCCc
Confidence 9998874
No 477
>PRK07102 short chain dehydrogenase; Provisional
Probab=96.45 E-value=0.035 Score=43.22 Aligned_cols=38 Identities=26% Similarity=0.300 Sum_probs=32.0
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHH
Q 048013 97 TNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV 135 (216)
Q Consensus 97 ~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~ 135 (216)
++++|+|+ |++|..+++.+...|++ |+++++++++.+.
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~-Vi~~~r~~~~~~~ 40 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGAR-LYLAARDVERLER 40 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCE-EEEEeCCHHHHHH
Confidence 57899986 99999999999989985 8999998876543
No 478
>PRK06436 glycerate dehydrogenase; Provisional
Probab=96.45 E-value=0.017 Score=46.95 Aligned_cols=84 Identities=26% Similarity=0.247 Sum_probs=54.8
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEE
Q 048013 95 PETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 174 (216)
Q Consensus 95 ~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 174 (216)
.++++.|+|.|.+|..+++.++.+|++ |++.+++... .+.... + .+ +.++. ...|+|+.
T Consensus 121 ~gktvgIiG~G~IG~~vA~~l~afG~~-V~~~~r~~~~------~~~~~~--~----~~----l~ell----~~aDiv~~ 179 (303)
T PRK06436 121 YNKSLGILGYGGIGRRVALLAKAFGMN-IYAYTRSYVN------DGISSI--Y----ME----PEDIM----KKSDFVLI 179 (303)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCE-EEEECCCCcc------cCcccc--c----CC----HHHHH----hhCCEEEE
Confidence 578999999999999999999999995 8999876321 111110 0 11 22221 24678777
Q ss_pred cCCCHHHH-----HHHHHHhhcCCEEEEec
Q 048013 175 CAGFNKTM-----STALSATRAGGKVCLVG 199 (216)
Q Consensus 175 ~~g~~~~~-----~~~~~~l~~~G~~v~~g 199 (216)
+++..+.. ...+..|+++..++.+|
T Consensus 180 ~lp~t~~T~~li~~~~l~~mk~ga~lIN~s 209 (303)
T PRK06436 180 SLPLTDETRGMINSKMLSLFRKGLAIINVA 209 (303)
T ss_pred CCCCCchhhcCcCHHHHhcCCCCeEEEECC
Confidence 77752221 45667777777777766
No 479
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=96.44 E-value=0.078 Score=44.43 Aligned_cols=35 Identities=29% Similarity=0.526 Sum_probs=31.4
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 048013 95 PETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVD 129 (216)
Q Consensus 95 ~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~ 129 (216)
...+|+|+|+|++|..+++.+...|..+++.+|.+
T Consensus 40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 45689999999999999999999999889998876
No 480
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=96.43 E-value=0.039 Score=43.07 Aligned_cols=80 Identities=26% Similarity=0.268 Sum_probs=46.8
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEE-cCChHHHHHH----HHcCCCE-EEeCCC-CcccHHHHHHHHHHHcCCC
Q 048013 97 TNVLIMGS-GPIGLVTMLAARAFGAPRIVIV-DVDDYRLSVA----KKLGADN-IVKVST-NLQDIAEEVEKIQKAMGTG 168 (216)
Q Consensus 97 ~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~-~~~~~~~~~~----~~~g~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~ 168 (216)
+++||.|+ |++|..+++.+...|++ ++++ .++.++.+.. +..+... .+..+- +..+..+.+.++.+. ..+
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~ 80 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGWS-VGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSA-FGR 80 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHh-cCC
Confidence 57899996 89999999999889986 5544 4555544322 2233222 122211 222333334444322 246
Q ss_pred ccEEEEcCCC
Q 048013 169 IDVSFDCAGF 178 (216)
Q Consensus 169 ~d~vi~~~g~ 178 (216)
+|++|.++|.
T Consensus 81 id~li~~ag~ 90 (248)
T PRK06947 81 LDALVNNAGI 90 (248)
T ss_pred CCEEEECCcc
Confidence 9999999873
No 481
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.41 E-value=0.041 Score=45.11 Aligned_cols=38 Identities=26% Similarity=0.198 Sum_probs=33.0
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHH
Q 048013 97 TNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSV 135 (216)
Q Consensus 97 ~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~ 135 (216)
++|.|+|+|.||...++.+...|++ |+..|.+++..+.
T Consensus 8 ~~VaVIGaG~MG~giA~~~a~aG~~-V~l~D~~~~~~~~ 45 (321)
T PRK07066 8 KTFAAIGSGVIGSGWVARALAHGLD-VVAWDPAPGAEAA 45 (321)
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCe-EEEEeCCHHHHHH
Confidence 6799999999999999999999995 9999998876543
No 482
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=96.41 E-value=0.044 Score=48.94 Aligned_cols=95 Identities=14% Similarity=0.052 Sum_probs=67.8
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEEcC
Q 048013 97 TNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 176 (216)
Q Consensus 97 ~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 176 (216)
++++|.|.|.+|+..++.++..|.+ ++++|.|+++.+.+++.|...++- |..++ +.+++ .+-...|.++-++
T Consensus 401 ~~vII~G~Gr~G~~va~~L~~~g~~-vvvID~d~~~v~~~~~~g~~v~~G-Dat~~---~~L~~---agi~~A~~vv~~~ 472 (601)
T PRK03659 401 PQVIIVGFGRFGQVIGRLLMANKMR-ITVLERDISAVNLMRKYGYKVYYG-DATQL---ELLRA---AGAEKAEAIVITC 472 (601)
T ss_pred CCEEEecCchHHHHHHHHHHhCCCC-EEEEECCHHHHHHHHhCCCeEEEe-eCCCH---HHHHh---cCCccCCEEEEEe
Confidence 5799999999999999999999996 999999999999999888765443 22222 22332 2335789999999
Q ss_pred CCHHHHHHH---HHHhhcCCEEEEec
Q 048013 177 GFNKTMSTA---LSATRAGGKVCLVG 199 (216)
Q Consensus 177 g~~~~~~~~---~~~l~~~G~~v~~g 199 (216)
++++..... .+...|+-+++.-.
T Consensus 473 ~d~~~n~~i~~~~r~~~p~~~IiaRa 498 (601)
T PRK03659 473 NEPEDTMKIVELCQQHFPHLHILARA 498 (601)
T ss_pred CCHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 985544333 34455676776543
No 483
>PRK12367 short chain dehydrogenase; Provisional
Probab=96.41 E-value=0.023 Score=44.68 Aligned_cols=75 Identities=19% Similarity=0.226 Sum_probs=45.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCh-HHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEE
Q 048013 95 PETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDD-YRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 172 (216)
Q Consensus 95 ~~~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 172 (216)
.+++++|.|+ |++|..+++.+...|++ |+++++++ +..+... .+....+..+- .+.. .+.+. . .++|++
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~~-Vi~~~r~~~~~~~~~~-~~~~~~~~~D~--~~~~-~~~~~---~-~~iDil 83 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGAK-VIGLTHSKINNSESND-ESPNEWIKWEC--GKEE-SLDKQ---L-ASLDVL 83 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCE-EEEEECCchhhhhhhc-cCCCeEEEeeC--CCHH-HHHHh---c-CCCCEE
Confidence 3588999996 89999999999889995 88888775 2222211 11112222111 1211 22221 2 369999
Q ss_pred EEcCCC
Q 048013 173 FDCAGF 178 (216)
Q Consensus 173 i~~~g~ 178 (216)
|+++|.
T Consensus 84 VnnAG~ 89 (245)
T PRK12367 84 ILNHGI 89 (245)
T ss_pred EECCcc
Confidence 999974
No 484
>PRK08291 ectoine utilization protein EutC; Validated
Probab=96.40 E-value=0.09 Score=43.35 Aligned_cols=96 Identities=15% Similarity=0.180 Sum_probs=61.8
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHH-cCCCeEEEEcCChHHHHHH-HHc----CCCEEEeCCCCcccHHHHHHHHHHHcC
Q 048013 93 IGPETNVLIMGSGPIGLVTMLAARA-FGAPRIVIVDVDDYRLSVA-KKL----GADNIVKVSTNLQDIAEEVEKIQKAMG 166 (216)
Q Consensus 93 ~~~~~~vlv~Gag~~G~~~i~~a~~-~g~~~vv~~~~~~~~~~~~-~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (216)
.+..++++|+|+|..|.+.+..+.. .+.+.|.+.+++.++.+.+ +++ +.. +..+ .++.+.+
T Consensus 129 ~~~~~~v~IiGaG~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~-v~~~----~d~~~al-------- 195 (330)
T PRK08291 129 REDASRAAVIGAGEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIP-VTVA----RDVHEAV-------- 195 (330)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCce-EEEe----CCHHHHH--------
Confidence 4556789999999999887777664 6777899999998886654 333 332 1111 1222211
Q ss_pred CCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCC
Q 048013 167 TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGH 202 (216)
Q Consensus 167 ~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 202 (216)
...|+|+.+++....+- -...++++-.+..+|...
T Consensus 196 ~~aDiVi~aT~s~~p~i-~~~~l~~g~~v~~vg~d~ 230 (330)
T PRK08291 196 AGADIIVTTTPSEEPIL-KAEWLHPGLHVTAMGSDA 230 (330)
T ss_pred ccCCEEEEeeCCCCcEe-cHHHcCCCceEEeeCCCC
Confidence 25899999998743221 113477877888887543
No 485
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=96.40 E-value=0.043 Score=45.03 Aligned_cols=87 Identities=20% Similarity=0.294 Sum_probs=59.3
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEE
Q 048013 95 PETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 174 (216)
Q Consensus 95 ~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 174 (216)
.|+++.|+|.|.+|.++++.++.+|.+ |+..+++.. .+..++.+...+ ++ .++. ...|++.-
T Consensus 145 ~gktvGIiG~GrIG~avA~r~~~Fgm~-v~y~~~~~~-~~~~~~~~~~y~--------~l----~ell----~~sDii~l 206 (324)
T COG1052 145 RGKTLGIIGLGRIGQAVARRLKGFGMK-VLYYDRSPN-PEAEKELGARYV--------DL----DELL----AESDIISL 206 (324)
T ss_pred CCCEEEEECCCHHHHHHHHHHhcCCCE-EEEECCCCC-hHHHhhcCceec--------cH----HHHH----HhCCEEEE
Confidence 488999999999999999999999995 888888765 333344443321 11 1221 14777666
Q ss_pred cCCC-HHH----HHHHHHHhhcCCEEEEec
Q 048013 175 CAGF-NKT----MSTALSATRAGGKVCLVG 199 (216)
Q Consensus 175 ~~g~-~~~----~~~~~~~l~~~G~~v~~g 199 (216)
..+. ++. -...+..|++++.+|..|
T Consensus 207 ~~Plt~~T~hLin~~~l~~mk~ga~lVNta 236 (324)
T COG1052 207 HCPLTPETRHLINAEELAKMKPGAILVNTA 236 (324)
T ss_pred eCCCChHHhhhcCHHHHHhCCCCeEEEECC
Confidence 6554 221 156777888888888776
No 486
>PLN02396 hexaprenyldihydroxybenzoate methyltransferase
Probab=96.39 E-value=0.021 Score=46.81 Aligned_cols=95 Identities=21% Similarity=0.228 Sum_probs=59.2
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHc----CC-CEEEeCCCCcccHHHHHHHHHHHcCCC
Q 048013 94 GPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKL----GA-DNIVKVSTNLQDIAEEVEKIQKAMGTG 168 (216)
Q Consensus 94 ~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~----g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (216)
.++.+||-+|+|. |..+..+++ .|+ .|+++|.+++..+.+++. +. ..+... ..+. .++. ...+.
T Consensus 130 ~~g~~ILDIGCG~-G~~s~~La~-~g~-~V~GID~s~~~i~~Ar~~~~~~~~~~~i~~~---~~da----e~l~-~~~~~ 198 (322)
T PLN02396 130 FEGLKFIDIGCGG-GLLSEPLAR-MGA-TVTGVDAVDKNVKIARLHADMDPVTSTIEYL---CTTA----EKLA-DEGRK 198 (322)
T ss_pred CCCCEEEEeeCCC-CHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHhcCcccceeEE---ecCH----HHhh-hccCC
Confidence 4677899999864 555555554 677 499999999988877542 11 111111 1122 1221 12457
Q ss_pred ccEEEEcC-----CC-HHHHHHHHHHhhcCCEEEEec
Q 048013 169 IDVSFDCA-----GF-NKTMSTALSATRAGGKVCLVG 199 (216)
Q Consensus 169 ~d~vi~~~-----g~-~~~~~~~~~~l~~~G~~v~~g 199 (216)
||+|+..- .+ ...++.+.+.|+|+|.+++.-
T Consensus 199 FD~Vi~~~vLeHv~d~~~~L~~l~r~LkPGG~liist 235 (322)
T PLN02396 199 FDAVLSLEVIEHVANPAEFCKSLSALTIPNGATVLST 235 (322)
T ss_pred CCEEEEhhHHHhcCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 99998532 22 356688889999999998653
No 487
>PLN02490 MPBQ/MSBQ methyltransferase
Probab=96.39 E-value=0.03 Score=46.29 Aligned_cols=104 Identities=21% Similarity=0.287 Sum_probs=64.9
Q ss_pred HHHcCC-CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCC-CEEEeCCCCcccHHHHHHHHHHHc
Q 048013 88 CRRANI-GPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGA-DNIVKVSTNLQDIAEEVEKIQKAM 165 (216)
Q Consensus 88 l~~~~~-~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~ 165 (216)
++...+ .++.+||-+|+|. |..+..+++..+...++++|.+++-++.+++... ..+.. ...+. .++. ..
T Consensus 105 l~~~~l~~~~~~VLDLGcGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i~~---i~gD~----e~lp-~~ 175 (340)
T PLN02490 105 LEPADLSDRNLKVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKI---IEGDA----EDLP-FP 175 (340)
T ss_pred HhhcccCCCCCEEEEEecCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCCeE---EeccH----HhCC-CC
Confidence 333333 4678999999875 6677777777654469999999887777765321 11111 11121 1110 12
Q ss_pred CCCccEEEEcCC-----C-HHHHHHHHHHhhcCCEEEEecc
Q 048013 166 GTGIDVSFDCAG-----F-NKTMSTALSATRAGGKVCLVGM 200 (216)
Q Consensus 166 ~~~~d~vi~~~g-----~-~~~~~~~~~~l~~~G~~v~~g~ 200 (216)
...||+|+.+-. + ...++++.+.|+|+|++++.+.
T Consensus 176 ~~sFDvVIs~~~L~~~~d~~~~L~e~~rvLkPGG~LvIi~~ 216 (340)
T PLN02490 176 TDYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACLIGP 216 (340)
T ss_pred CCceeEEEEcChhhhCCCHHHHHHHHHHhcCCCcEEEEEEe
Confidence 346999887432 2 3466889999999999988764
No 488
>PRK10901 16S rRNA methyltransferase B; Provisional
Probab=96.39 E-value=0.024 Score=48.38 Aligned_cols=103 Identities=18% Similarity=0.218 Sum_probs=62.0
Q ss_pred HHHcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHH----HcCCCEEEeCCCCcccHHHHHHHHHH
Q 048013 88 CRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAK----KLGADNIVKVSTNLQDIAEEVEKIQK 163 (216)
Q Consensus 88 l~~~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~ 163 (216)
.....++++++||-.|+|+ |..+..+++..+-..|+++|.+++..+.++ .+|....+. .. |..+ ...+
T Consensus 237 ~~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~v~a~D~s~~~l~~~~~n~~~~g~~~~~~-~~---D~~~-~~~~-- 308 (427)
T PRK10901 237 ATLLAPQNGERVLDACAAP-GGKTAHILELAPQAQVVALDIDAQRLERVRENLQRLGLKATVI-VG---DARD-PAQW-- 308 (427)
T ss_pred HHHcCCCCCCEEEEeCCCC-ChHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEE-Ec---Cccc-chhh--
Confidence 3445678999999998764 445556666554236999999998876663 355542211 11 1111 1111
Q ss_pred HcCCCccEEEE---cCCC-------------------------HHHHHHHHHHhhcCCEEEEe
Q 048013 164 AMGTGIDVSFD---CAGF-------------------------NKTMSTALSATRAGGKVCLV 198 (216)
Q Consensus 164 ~~~~~~d~vi~---~~g~-------------------------~~~~~~~~~~l~~~G~~v~~ 198 (216)
.....||.|+- |++. ...+..+++.|+|||+++..
T Consensus 309 ~~~~~fD~Vl~D~Pcs~~G~~~~~p~~~~~~~~~~l~~l~~~q~~iL~~a~~~LkpGG~lvys 371 (427)
T PRK10901 309 WDGQPFDRILLDAPCSATGVIRRHPDIKWLRRPEDIAALAALQSEILDALWPLLKPGGTLLYA 371 (427)
T ss_pred cccCCCCEEEECCCCCcccccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 01346999884 3321 13567888899999998743
No 489
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=96.39 E-value=0.075 Score=44.91 Aligned_cols=36 Identities=33% Similarity=0.503 Sum_probs=31.2
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 048013 95 PETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDD 130 (216)
Q Consensus 95 ~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~ 130 (216)
...+|+|+|+|++|..++..+...|..++..+|.+.
T Consensus 41 ~~~~VlviG~GGlGs~va~~La~~Gvg~i~lvD~D~ 76 (392)
T PRK07878 41 KNARVLVIGAGGLGSPTLLYLAAAGVGTLGIVEFDV 76 (392)
T ss_pred hcCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCCE
Confidence 456899999999999999999999999888887653
No 490
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.39 E-value=0.013 Score=47.19 Aligned_cols=95 Identities=20% Similarity=0.195 Sum_probs=59.5
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH-HHcCC----CEEEeCCCCcccHHHHHHHHHHHcCCC
Q 048013 94 GPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA-KKLGA----DNIVKVSTNLQDIAEEVEKIQKAMGTG 168 (216)
Q Consensus 94 ~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~-~~~g~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (216)
..+++++|+|+|++|.+++..+...|+.++++++++.++.+.+ +.++. ..+... ++ +.+. -..
T Consensus 125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~----~~----~~~~----~~~ 192 (284)
T PRK12549 125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAG----SD----LAAA----LAA 192 (284)
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEec----cc----hHhh----hCC
Confidence 3567899999999999999999999998899999998886644 33321 112111 11 1111 135
Q ss_pred ccEEEEcCCCH----HHHHHHHHHhhcCCEEEEecc
Q 048013 169 IDVSFDCAGFN----KTMSTALSATRAGGKVCLVGM 200 (216)
Q Consensus 169 ~d~vi~~~g~~----~~~~~~~~~l~~~G~~v~~g~ 200 (216)
+|+||+++..- .........++++..++.+-.
T Consensus 193 aDiVInaTp~Gm~~~~~~~~~~~~l~~~~~v~DivY 228 (284)
T PRK12549 193 ADGLVHATPTGMAKHPGLPLPAELLRPGLWVADIVY 228 (284)
T ss_pred CCEEEECCcCCCCCCCCCCCCHHHcCCCcEEEEeee
Confidence 89999996530 000111234666666665544
No 491
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=96.38 E-value=0.16 Score=40.59 Aligned_cols=107 Identities=16% Similarity=0.172 Sum_probs=64.5
Q ss_pred HHHHHHHcC-CCCCCEEEEEcCCHHHHHHHHHHHHc----CC------CeEEEEcCC-----------hHHHHHHHHcCC
Q 048013 84 GVHACRRAN-IGPETNVLIMGSGPIGLVTMLAARAF----GA------PRIVIVDVD-----------DYRLSVAKKLGA 141 (216)
Q Consensus 84 a~~~l~~~~-~~~~~~vlv~Gag~~G~~~i~~a~~~----g~------~~vv~~~~~-----------~~~~~~~~~~g~ 141 (216)
-.++++..+ --.+.+|++.|+|.-|..+++++... |. ++++.+|+. +.+..+++....
T Consensus 12 llnAlk~~g~~l~d~~iv~~GAGsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~~a~~~~~ 91 (279)
T cd05312 12 LLAALRITGKPLSDQRILFLGAGSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLTPFKKPFARKDEE 91 (279)
T ss_pred HHHHHHHhCCChhhcEEEEECcCHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcchHHHHHHHhhcCc
Confidence 355665543 33567899999988887777777665 87 578888775 223333333111
Q ss_pred CEEEeCCCCcccHHHHHHHHHHHcCCCccEEEEcCCCH-HHHHHHHHHhh---cCCEEEEeccCCC
Q 048013 142 DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFN-KTMSTALSATR---AGGKVCLVGMGHR 203 (216)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~~l~---~~G~~v~~g~~~~ 203 (216)
....++.+.++.+ +.|+.|.+++.. ...+..++.|. +.=.++-++.+.+
T Consensus 92 -------~~~~~L~e~i~~v------~ptvlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNPt~ 144 (279)
T cd05312 92 -------KEGKSLLEVVKAV------KPTVLIGLSGVGGAFTEEVVRAMAKSNERPIIFALSNPTS 144 (279)
T ss_pred -------ccCCCHHHHHHhc------CCCEEEEeCCCCCCCCHHHHHHHHhcCCCCEEEECCCcCC
Confidence 0123555555443 689999988632 34467777777 4445555555444
No 492
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=96.38 E-value=0.022 Score=41.67 Aligned_cols=95 Identities=19% Similarity=0.282 Sum_probs=60.8
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHH-----HcCCCcc
Q 048013 97 TNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQK-----AMGTGID 170 (216)
Q Consensus 97 ~~vlv~Ga-g~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~d 170 (216)
.+|+|+|. |.+|.+.+++.++.++- |..+|.++... .....++ ..+.+|-+.-+.+.+ ..+.++|
T Consensus 4 grVivYGGkGALGSacv~~Fkannyw-V~siDl~eNe~-----Ad~sI~V---~~~~swtEQe~~v~~~vg~sL~gekvD 74 (236)
T KOG4022|consen 4 GRVIVYGGKGALGSACVEFFKANNYW-VLSIDLSENEQ-----ADSSILV---DGNKSWTEQEQSVLEQVGSSLQGEKVD 74 (236)
T ss_pred ceEEEEcCcchHhHHHHHHHHhcCeE-EEEEeeccccc-----ccceEEe---cCCcchhHHHHHHHHHHHHhhcccccc
Confidence 46889987 99999999999999984 77777664321 1122222 233444443332222 3578899
Q ss_pred EEEEcCCCH--------H------------------HHHHHHHHhhcCCEEEEecc
Q 048013 171 VSFDCAGFN--------K------------------TMSTALSATRAGGKVCLVGM 200 (216)
Q Consensus 171 ~vi~~~g~~--------~------------------~~~~~~~~l~~~G~~v~~g~ 200 (216)
.||...|+- + ....+-..|+++|-+-+-|-
T Consensus 75 av~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGA 130 (236)
T KOG4022|consen 75 AVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGA 130 (236)
T ss_pred eEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeeccc
Confidence 999988762 0 11334457899998888774
No 493
>PRK07411 hypothetical protein; Validated
Probab=96.37 E-value=0.068 Score=45.12 Aligned_cols=36 Identities=39% Similarity=0.496 Sum_probs=31.4
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 048013 95 PETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDD 130 (216)
Q Consensus 95 ~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~ 130 (216)
...+|+|+|+|++|..+++.+...|..++..+|.+.
T Consensus 37 ~~~~VlivG~GGlG~~va~~La~~Gvg~l~lvD~D~ 72 (390)
T PRK07411 37 KAASVLCIGTGGLGSPLLLYLAAAGIGRIGIVDFDV 72 (390)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCEEEEECCCE
Confidence 346899999999999999999999999888887653
No 494
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=96.36 E-value=0.18 Score=34.66 Aligned_cols=84 Identities=24% Similarity=0.265 Sum_probs=56.7
Q ss_pred EEEEEcCCHHHHHHHHHHHHc--CCCeEEEEcCChHHHHH-HHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEE
Q 048013 98 NVLIMGSGPIGLVTMLAARAF--GAPRIVIVDVDDYRLSV-AKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 174 (216)
Q Consensus 98 ~vlv~Gag~~G~~~i~~a~~~--g~~~vv~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 174 (216)
++.|+|+|.+|......++.. +.+.+-+++.+.++.+. .++++.. .+. ++.+.+. ...+|+|+-
T Consensus 2 ~v~iiG~G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~~~-~~~------~~~~ll~------~~~~D~V~I 68 (120)
T PF01408_consen 2 RVGIIGAGSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYGIP-VYT------DLEELLA------DEDVDAVII 68 (120)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTSE-EES------SHHHHHH------HTTESEEEE
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhccc-chh------HHHHHHH------hhcCCEEEE
Confidence 578899999998887666665 44334456888777665 4667777 322 2332222 236999999
Q ss_pred cCCCHHHHHHHHHHhhcCCE
Q 048013 175 CAGFNKTMSTALSATRAGGK 194 (216)
Q Consensus 175 ~~g~~~~~~~~~~~l~~~G~ 194 (216)
++......+.+..+++.+-.
T Consensus 69 ~tp~~~h~~~~~~~l~~g~~ 88 (120)
T PF01408_consen 69 ATPPSSHAEIAKKALEAGKH 88 (120)
T ss_dssp ESSGGGHHHHHHHHHHTTSE
T ss_pred ecCCcchHHHHHHHHHcCCE
Confidence 99987777777777776653
No 495
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.36 E-value=0.17 Score=41.08 Aligned_cols=32 Identities=22% Similarity=0.166 Sum_probs=27.3
Q ss_pred CCCEEEEEcC---CHHHHHHHHHHHHcCCCeEEEEc
Q 048013 95 PETNVLIMGS---GPIGLVTMLAARAFGAPRIVIVD 127 (216)
Q Consensus 95 ~~~~vlv~Ga---g~~G~~~i~~a~~~g~~~vv~~~ 127 (216)
.++++||+|+ .++|.++++.+...|++ |++.+
T Consensus 7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~-Vvv~~ 41 (299)
T PRK06300 7 TGKIAFIAGIGDDQGYGWGIAKALAEAGAT-ILVGT 41 (299)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHCCCE-EEEEe
Confidence 5789999997 59999999999999996 66654
No 496
>PRK15068 tRNA mo(5)U34 methyltransferase; Provisional
Probab=96.35 E-value=0.085 Score=43.34 Aligned_cols=97 Identities=22% Similarity=0.220 Sum_probs=59.9
Q ss_pred cCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH---HH-cCCC-EEEeCCCCcccHHHHHHHHHHHc
Q 048013 91 ANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA---KK-LGAD-NIVKVSTNLQDIAEEVEKIQKAM 165 (216)
Q Consensus 91 ~~~~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~---~~-~g~~-~~~~~~~~~~~~~~~~~~~~~~~ 165 (216)
....++++||-+|+|. |..+..++.. |...|+++|.+..-.... ++ .+.. .+.... .+ +.++. .
T Consensus 118 l~~l~g~~VLDIGCG~-G~~~~~la~~-g~~~V~GiD~S~~~l~q~~a~~~~~~~~~~i~~~~---~d----~e~lp--~ 186 (322)
T PRK15068 118 LSPLKGRTVLDVGCGN-GYHMWRMLGA-GAKLVVGIDPSQLFLCQFEAVRKLLGNDQRAHLLP---LG----IEQLP--A 186 (322)
T ss_pred hCCCCCCEEEEeccCC-cHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEe---CC----HHHCC--C
Confidence 4445788999999875 7777777775 655699999887544322 22 2211 121111 11 12221 1
Q ss_pred CCCccEEEEcCC-----C-HHHHHHHHHHhhcCCEEEEe
Q 048013 166 GTGIDVSFDCAG-----F-NKTMSTALSATRAGGKVCLV 198 (216)
Q Consensus 166 ~~~~d~vi~~~g-----~-~~~~~~~~~~l~~~G~~v~~ 198 (216)
...||+|+..-. + ...++.+.+.|+|+|++++-
T Consensus 187 ~~~FD~V~s~~vl~H~~dp~~~L~~l~~~LkpGG~lvl~ 225 (322)
T PRK15068 187 LKAFDTVFSMGVLYHRRSPLDHLKQLKDQLVPGGELVLE 225 (322)
T ss_pred cCCcCEEEECChhhccCCHHHHHHHHHHhcCCCcEEEEE
Confidence 456999997421 1 35678899999999999864
No 497
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=96.35 E-value=0.059 Score=43.58 Aligned_cols=94 Identities=15% Similarity=0.167 Sum_probs=55.4
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEEEcCC
Q 048013 98 NVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 177 (216)
Q Consensus 98 ~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 177 (216)
+|.|+|+|.+|.+.+..+...|.+ |+.++++.++.+.+++.|... . +...........+.. .. ..+|++|-++.
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~~-V~~~~r~~~~~~~~~~~g~~~--~-~~~~~~~~~~~~~~~-~~-~~~d~vila~k 75 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGHD-VTLVARRGAHLDALNENGLRL--E-DGEITVPVLAADDPA-EL-GPQDLVILAVK 75 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCCe-EEEEECChHHHHHHHHcCCcc--c-CCceeecccCCCChh-Hc-CCCCEEEEecc
Confidence 588999999999988888888875 888888777777666555421 0 000000000000110 11 57999999988
Q ss_pred CHHHHHHHHHHh----hcCCEEEEe
Q 048013 178 FNKTMSTALSAT----RAGGKVCLV 198 (216)
Q Consensus 178 ~~~~~~~~~~~l----~~~G~~v~~ 198 (216)
... ...+++.+ .++..++.+
T Consensus 76 ~~~-~~~~~~~l~~~l~~~~~iv~~ 99 (304)
T PRK06522 76 AYQ-LPAALPSLAPLLGPDTPVLFL 99 (304)
T ss_pred ccc-HHHHHHHHhhhcCCCCEEEEe
Confidence 732 34444444 344555544
No 498
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=96.35 E-value=0.023 Score=45.73 Aligned_cols=43 Identities=21% Similarity=0.366 Sum_probs=37.2
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHH
Q 048013 94 GPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVA 136 (216)
Q Consensus 94 ~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~ 136 (216)
..+++++|+|+|+.+.+++..+..+|++++.+++|+.++.+.+
T Consensus 125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~L 167 (283)
T PRK14027 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQAL 167 (283)
T ss_pred cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHH
Confidence 4578899999999999999998889998899999998876654
No 499
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=96.35 E-value=0.062 Score=43.91 Aligned_cols=87 Identities=17% Similarity=0.130 Sum_probs=59.4
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChHHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHcCCCccEEE
Q 048013 94 GPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSVAKKLGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 173 (216)
Q Consensus 94 ~~~~~vlv~Gag~~G~~~i~~a~~~g~~~vv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 173 (216)
-.+++|.|+|.|.+|...++.++.+|.+ |++.++.....+.++..|... . + +.++. ...|+|+
T Consensus 14 LkgKtVGIIG~GsIG~amA~nL~d~G~~-ViV~~r~~~s~~~A~~~G~~v-~-------s----l~Eaa----k~ADVV~ 76 (335)
T PRK13403 14 LQGKTVAVIGYGSQGHAQAQNLRDSGVE-VVVGVRPGKSFEVAKADGFEV-M-------S----VSEAV----RTAQVVQ 76 (335)
T ss_pred hCcCEEEEEeEcHHHHHHHHHHHHCcCE-EEEEECcchhhHHHHHcCCEE-C-------C----HHHHH----hcCCEEE
Confidence 4678999999999999999999999996 777766555555666666531 1 1 22221 2589999
Q ss_pred EcCCCHH---HH-HHHHHHhhcCCEEEE
Q 048013 174 DCAGFNK---TM-STALSATRAGGKVCL 197 (216)
Q Consensus 174 ~~~g~~~---~~-~~~~~~l~~~G~~v~ 197 (216)
-+++.+. .+ ...+..|+++..++.
T Consensus 77 llLPd~~t~~V~~~eil~~MK~GaiL~f 104 (335)
T PRK13403 77 MLLPDEQQAHVYKAEVEENLREGQMLLF 104 (335)
T ss_pred EeCCChHHHHHHHHHHHhcCCCCCEEEE
Confidence 9998632 22 345666777765543
No 500
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=96.33 E-value=0.12 Score=42.48 Aligned_cols=101 Identities=13% Similarity=0.101 Sum_probs=65.2
Q ss_pred HHcCCCCCCEEEEEcCCHHHHHHHHHHHH-cCCCeEEEEcCChHHHHHH-HH---cCCCEEEeCCCCcccHHHHHHHHHH
Q 048013 89 RRANIGPETNVLIMGSGPIGLVTMLAARA-FGAPRIVIVDVDDYRLSVA-KK---LGADNIVKVSTNLQDIAEEVEKIQK 163 (216)
Q Consensus 89 ~~~~~~~~~~vlv~Gag~~G~~~i~~a~~-~g~~~vv~~~~~~~~~~~~-~~---~g~~~~~~~~~~~~~~~~~~~~~~~ 163 (216)
+....+...++.|+|+|..|...+..+.. ...+.|.+.+++.++.+.+ ++ ++.... .. .+..+.+
T Consensus 121 ~~La~~~~~~lgiiG~G~qA~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~g~~v~-~~----~~~~eav----- 190 (325)
T TIGR02371 121 KYLARKDSSVLGIIGAGRQAWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDYEVPVR-AA----TDPREAV----- 190 (325)
T ss_pred HHhCCCCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhhCCcEE-Ee----CCHHHHh-----
Confidence 44445567889999999999876655543 5667899999999886543 33 343211 11 1222222
Q ss_pred HcCCCccEEEEcCCCHHHHHHHHHHhhcCCEEEEeccCCC
Q 048013 164 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHR 203 (216)
Q Consensus 164 ~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 203 (216)
++.|+|+-|+.+.+.+ .....++|+-.+..+|...+
T Consensus 191 ---~~aDiVitaT~s~~P~-~~~~~l~~g~~v~~vGs~~p 226 (325)
T TIGR02371 191 ---EGCDILVTTTPSRKPV-VKADWVSEGTHINAIGADAP 226 (325)
T ss_pred ---ccCCEEEEecCCCCcE-ecHHHcCCCCEEEecCCCCc
Confidence 3689999999763321 22456799999999996443
Done!