BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048017
(566 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|I1S2N3|GAOA_GIBZE Galactose oxidase OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 /
FGSC 9075 / NRRL 31084) GN=GAOA PE=3 SV=1
Length = 680
Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 109/464 (23%), Positives = 185/464 (39%), Gaps = 70/464 (15%)
Query: 125 LLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYAS 184
+ + D +C ++ +G +V TGG + + L+ +D W+ ++ R Y S
Sbjct: 262 VTKHDMFCPGISMDGNGQIVVTGGNDA--KKTSLYDSSSDS---WIP-GPDMQVARGYQS 315
Query: 185 NQILPDNRIIVVGGR-RVFTYEFYPKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPD 243
+ + D R+ +GG +E ++ S SS + +P L D
Sbjct: 316 SATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNP----------MLTAD 365
Query: 244 GNLFIFANRRSILFDYINNKLVKEFPVIPGNDKRNYPSTGSSILLPVKLSAGSDGNGTAA 303
++ + LF + K F P Y ++GS + SAG +
Sbjct: 366 KQGLYRSDNHAWLFGW---KKGSVFQAGPSTAMNWYYTSGSGDVK----SAGKRQSNRGV 418
Query: 304 LPDAEVMVCGGAP-----AGAFIKSDKESVYVEASRTCGRLKVTDKYP------VWSMEF 352
PDA +CG A G + Y ++ T +T P V++
Sbjct: 419 APDA---MCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNG 475
Query: 353 MPMPRVMSDMLLLPSGDVIIINGASNGTAGWEDAEE--------PDR-RFVVLNPSKIPR 403
+ R ++LP G I G G +ED+ P++ F NP+ I R
Sbjct: 476 LYFARTFHTSVVLPDGSTFITGGQRRGIP-FEDSTPVFTPEIYVPEQDTFYKQNPNSIVR 534
Query: 404 MYHSSAVVLPDGRILVGGSNPHRRYNFTAYPYPTDLSLEAFHPHYLDPENAYM--RPSIL 461
+YHS +++LPDGR+ GG + F P+YL N + RP I
Sbjct: 535 VYHSISLLLPDGRVFNGGG------GLCGDCTTNHFDAQIFTPNYLYNSNGNLATRPKI- 587
Query: 462 SLESIDRTVSYNEVFAVTFELSSYSPSGEISVSLMTPSFTTHSFAMNQRLVVLNVVSVSQ 521
T + + V ++ + S SL+ TH+ +QR + L + +
Sbjct: 588 -------TRTSTQSVKVGGRITISTDSSITKASLIRYGTATHTVNTDQRRIPLTLTNNGG 640
Query: 522 LSVYAYKVVVNGPPTATVAPPGYYMMFVVH-AGIPSHAVWVKVT 564
S Y+++V P + VA PGY+M+FV++ AG+PS A ++VT
Sbjct: 641 NS-YSFQV----PSDSGVALPGYWMLFVMNSAGVPSVASTIRVT 679
>sp|P0CS93|GAOA_GIBZA Galactose oxidase OS=Gibberella zeae GN=GAOA PE=1 SV=1
Length = 680
Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 109/464 (23%), Positives = 185/464 (39%), Gaps = 70/464 (15%)
Query: 125 LLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYAS 184
+ + D +C ++ +G +V TGG + + L+ +D W+ ++ R Y S
Sbjct: 262 VTKHDMFCPGISMDGNGQIVVTGGNDA--KKTSLYDSSSDS---WIP-GPDMQVARGYQS 315
Query: 185 NQILPDNRIIVVGGR-RVFTYEFYPKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPD 243
+ + D R+ +GG +E ++ S SS + +P L D
Sbjct: 316 SATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNP----------MLTAD 365
Query: 244 GNLFIFANRRSILFDYINNKLVKEFPVIPGNDKRNYPSTGSSILLPVKLSAGSDGNGTAA 303
++ + LF + K F P Y ++GS + SAG +
Sbjct: 366 KQGLYRSDNHAWLFGW---KKGSVFQAGPSTAMNWYYTSGSGDVK----SAGKRQSNRGV 418
Query: 304 LPDAEVMVCGGAP-----AGAFIKSDKESVYVEASRTCGRLKVTDKYP------VWSMEF 352
PDA +CG A G + Y ++ T +T P V++
Sbjct: 419 APDA---MCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNG 475
Query: 353 MPMPRVMSDMLLLPSGDVIIINGASNGTAGWEDAEE--------PDR-RFVVLNPSKIPR 403
+ R ++LP G I G G +ED+ P++ F NP+ I R
Sbjct: 476 LYFARTFHTSVVLPDGSTFITGGQRRGIP-FEDSTPVFTPEIYVPEQDTFYKQNPNSIVR 534
Query: 404 MYHSSAVVLPDGRILVGGSNPHRRYNFTAYPYPTDLSLEAFHPHYLDPENAYM--RPSIL 461
+YHS +++LPDGR+ GG + F P+YL N + RP I
Sbjct: 535 VYHSISLLLPDGRVFNGGG------GLCGDCTTNHFDAQIFTPNYLYNSNGNLATRPKI- 587
Query: 462 SLESIDRTVSYNEVFAVTFELSSYSPSGEISVSLMTPSFTTHSFAMNQRLVVLNVVSVSQ 521
T + + V ++ + S SL+ TH+ +QR + L + +
Sbjct: 588 -------TRTSTQSVKVGGRITISTDSSISKASLIRYGTATHTVNTDQRRIPLTLTNNGG 640
Query: 522 LSVYAYKVVVNGPPTATVAPPGYYMMFVVH-AGIPSHAVWVKVT 564
S Y+++V P + VA PGY+M+FV++ AG+PS A ++VT
Sbjct: 641 NS-YSFQV----PSDSGVALPGYWMLFVMNSAGVPSVASTIRVT 679
>sp|Q00644|YNG2_AZOBR Uncharacterized 17.8 kDa protein in nodG 5'region OS=Azospirillum
brasilense PE=4 SV=2
Length = 169
Score = 38.5 bits (88), Expect = 0.15, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 10/107 (9%)
Query: 277 RNYPSTGSSILLPVKLSAGSDGNGTAALPDAEVMVCGGAPAGAFIKSDKESVYVEASRTC 336
R YP+ G + PV++S DG+ ALP A V G F + + + R
Sbjct: 25 RRYPAAGLRTV-PVRVSIQPDGDVLVALPRAAV------EDGRFDAAAARRLTAQMRRLV 77
Query: 337 GRLKVTDKYPVWSME-FMPMPRVMSDMLLLPSGDVIIINGASNGTAG 382
GR+ T+ P+W ++ + ++ + L SG V++ NG T G
Sbjct: 78 GRVTTTN--PLWGIDALQALGEAVTALAGLCSGGVLLWNGFEQMTTG 122
>sp|Q8BYR1|LCMT2_MOUSE Leucine carboxyl methyltransferase 2 OS=Mus musculus GN=Lcmt2 PE=2
SV=4
Length = 686
Score = 37.4 bits (85), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 10/76 (13%)
Query: 134 SGAVLSDGTLVQTGGYNVGD----RVIR---LFTPCNDE--GCDWVEL-SKNLWDRRWYA 183
+ A+LS G + GG+ + RV R L C+ E GC L ++ WD R Y
Sbjct: 361 ASALLSPGVIFSAGGFGEQEGRHCRVSRFHVLSRSCDSEWEGCQISTLGTEGQWDGRLYH 420
Query: 184 SNQILPDNRIIVVGGR 199
+ L D R++V+GGR
Sbjct: 421 TMTRLSDTRVLVLGGR 436
>sp|Q9H511|KLH31_HUMAN Kelch-like protein 31 OS=Homo sapiens GN=KLHL31 PE=2 SV=1
Length = 634
Score = 36.6 bits (83), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 99 EGDVGQLDCTAHSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGY--NVGDRVI 156
EG + L+C Y ++N ++P C + ++DG ++ TGGY N R +
Sbjct: 430 EGSLASLEC------YVPSTNQWQPKTPLEVARCCHASAVADGRVLVTGGYIANAYSRSV 483
Query: 157 RLFTPCNDEGCDWVELSKNLWDRRWYASNQILPDNRIIVVGGRRV 201
+ P +D W EL R W+ + + +R+ V+GG ++
Sbjct: 484 CAYDPASD---SWQELPNLSTPRGWHCA--VTLSDRVYVMGGSQL 523
>sp|Q5XIA3|LCMT2_RAT Leucine carboxyl methyltransferase 2 OS=Rattus norvegicus GN=Lcmt2
PE=2 SV=1
Length = 686
Score = 35.0 bits (79), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 10/73 (13%)
Query: 137 VLSDGTLVQTGGYNVGD----RVIR---LFTPCNDE--GCDWVEL-SKNLWDRRWYASNQ 186
+LS G + GG+ + RV R L C+ E GC L ++ WD R Y +
Sbjct: 364 LLSPGIIFSAGGFGEQEGRHCRVSRFHLLSRSCDSEWKGCQISTLGTEGQWDGRLYHTMT 423
Query: 187 ILPDNRIIVVGGR 199
L D R++V+GGR
Sbjct: 424 RLSDTRVLVLGGR 436
>sp|Q8BWA5|KLH31_MOUSE Kelch-like protein 31 OS=Mus musculus GN=Klhl31 PE=1 SV=1
Length = 634
Score = 34.3 bits (77), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 99 EGDVGQLDCTAHSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGY--NVGDRVI 156
EG + L+C Y ++N ++P C + ++DG ++ TGGY + R +
Sbjct: 430 EGSLASLEC------YVPSTNQWQPKAPLEVARCCHASAVADGRVIVTGGYIGSAYSRSV 483
Query: 157 RLFTPCNDEGCDWVELSKNLWDRRWYASNQILPDNRIIVVGGRRV 201
+ P D W EL + R W+ + + +R+ V+GG ++
Sbjct: 484 CAYDPALDA---WQELPQLSTPRGWHCA--VALGDRLYVMGGSQL 523
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 223,377,892
Number of Sequences: 539616
Number of extensions: 9959645
Number of successful extensions: 63867
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 62778
Number of HSP's gapped (non-prelim): 1004
length of query: 566
length of database: 191,569,459
effective HSP length: 123
effective length of query: 443
effective length of database: 125,196,691
effective search space: 55462134113
effective search space used: 55462134113
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)