Query 048017
Match_columns 566
No_of_seqs 348 out of 1919
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 09:12:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048017.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048017hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1k3i_A Galactose oxidase precu 100.0 5.3E-73 1.8E-77 641.2 42.3 438 49-565 173-656 (656)
2 1zgk_A Kelch-like ECH-associat 100.0 1.2E-33 4.2E-38 289.1 28.2 276 61-411 12-308 (308)
3 2xn4_A Kelch-like protein 2; s 100.0 2.2E-33 7.4E-38 285.7 29.5 274 67-417 9-302 (302)
4 3ii7_A Kelch-like protein 7; p 100.0 2.3E-32 7.9E-37 278.7 27.4 264 73-413 11-295 (306)
5 2vpj_A Kelch-like protein 12; 100.0 1.2E-31 4.1E-36 272.5 27.4 266 72-411 13-299 (301)
6 2woz_A Kelch repeat and BTB do 100.0 3.4E-31 1.1E-35 272.0 23.0 252 111-421 26-314 (318)
7 4asc_A Kelch repeat and BTB do 100.0 2.4E-31 8.2E-36 272.7 18.1 255 111-423 15-306 (315)
8 1zgk_A Kelch-like ECH-associat 100.0 1E-29 3.5E-34 260.0 28.4 255 130-449 14-288 (308)
9 2xn4_A Kelch-like protein 2; s 100.0 1.4E-29 4.9E-34 257.5 27.3 248 139-449 14-277 (302)
10 3ii7_A Kelch-like protein 7; p 100.0 3.2E-29 1.1E-33 255.4 26.5 248 140-449 11-273 (306)
11 2uvk_A YJHT; unknown function, 100.0 1.1E-29 3.7E-34 264.5 22.6 283 57-426 3-328 (357)
12 2vpj_A Kelch-like protein 12; 100.0 2E-28 6.7E-33 248.8 28.9 249 139-449 13-279 (301)
13 4asc_A Kelch repeat and BTB do 100.0 1.4E-27 4.7E-32 244.7 21.8 267 49-376 20-306 (315)
14 1k3i_A Galactose oxidase precu 100.0 1.9E-27 6.5E-32 268.5 23.7 287 111-448 168-497 (656)
15 2woz_A Kelch repeat and BTB do 100.0 1E-26 3.5E-31 238.5 24.3 265 49-374 31-314 (318)
16 2zwa_A Leucine carboxyl methyl 99.9 6.5E-25 2.2E-29 249.5 25.7 264 52-424 377-675 (695)
17 2uvk_A YJHT; unknown function, 99.9 3.2E-24 1.1E-28 223.1 20.4 240 51-355 42-353 (357)
18 2zwa_A Leucine carboxyl methyl 99.8 1.8E-20 6.2E-25 212.9 20.7 227 50-377 420-675 (695)
19 3no2_A Uncharacterized protein 97.7 0.011 3.7E-07 58.6 24.8 206 110-374 16-230 (276)
20 3dsm_A Uncharacterized protein 97.7 0.025 8.7E-07 57.0 27.4 268 109-447 17-301 (328)
21 4ery_A WD repeat-containing pr 97.6 0.042 1.4E-06 54.0 27.8 152 68-265 29-184 (312)
22 1k8k_C P40, ARP2/3 complex 41 97.5 0.03 1E-06 56.0 24.8 153 68-260 14-172 (372)
23 3zwl_B Eukaryotic translation 97.5 0.045 1.5E-06 54.3 26.0 163 68-265 38-211 (369)
24 1got_B GT-beta; complex (GTP-b 97.4 0.031 1.1E-06 56.2 24.3 260 71-424 64-333 (340)
25 3bws_A Protein LP49; two-domai 97.4 0.076 2.6E-06 54.6 26.8 133 111-266 146-297 (433)
26 3no2_A Uncharacterized protein 97.4 0.025 8.6E-07 55.9 22.0 217 140-422 4-231 (276)
27 3hfq_A Uncharacterized protein 97.4 0.041 1.4E-06 55.0 23.9 149 110-265 19-176 (347)
28 3ow8_A WD repeat-containing pr 97.3 0.094 3.2E-06 52.4 26.1 243 111-424 60-311 (321)
29 1gxr_A ESG1, transducin-like e 97.2 0.08 2.7E-06 51.8 23.9 261 68-424 57-327 (337)
30 1l0q_A Surface layer protein; 97.2 0.19 6.4E-06 50.8 27.1 136 110-268 13-154 (391)
31 3fm0_A Protein CIAO1; WDR39,SG 97.2 0.12 4.1E-06 52.0 25.3 157 68-265 22-185 (345)
32 2pbi_B Guanine nucleotide-bind 97.2 0.12 4.3E-06 52.2 25.3 251 110-424 87-347 (354)
33 2qc5_A Streptogramin B lactona 97.2 0.2 6.7E-06 48.3 27.8 241 111-422 43-290 (300)
34 2hes_X YDR267CP; beta-propelle 97.1 0.12 4.2E-06 51.6 24.4 262 111-424 36-318 (330)
35 2ynn_A Coatomer subunit beta'; 97.1 0.065 2.2E-06 52.9 21.8 149 70-263 21-174 (304)
36 2z2n_A Virginiamycin B lyase; 97.1 0.22 7.5E-06 47.9 29.1 240 111-422 38-284 (299)
37 1gxr_A ESG1, transducin-like e 97.0 0.091 3.1E-06 51.4 21.8 221 135-423 57-285 (337)
38 3vl1_A 26S proteasome regulato 97.0 0.2 6.8E-06 51.1 24.6 88 110-207 120-208 (420)
39 1vyh_C Platelet-activating fac 96.9 0.19 6.5E-06 52.0 24.5 134 111-265 132-269 (410)
40 3vl1_A 26S proteasome regulato 96.8 0.078 2.7E-06 54.2 20.3 137 110-268 79-219 (420)
41 3jrp_A Fusion protein of prote 96.8 0.11 3.7E-06 51.8 20.8 247 69-399 18-297 (379)
42 3dwl_C Actin-related protein 2 96.7 0.074 2.5E-06 53.6 18.9 136 111-262 35-178 (377)
43 3iz6_a 40S ribosomal protein R 96.7 0.32 1.1E-05 49.5 24.0 50 110-162 89-138 (380)
44 4aez_A CDC20, WD repeat-contai 96.7 0.23 7.7E-06 50.9 22.9 250 110-424 114-370 (401)
45 3vgz_A Uncharacterized protein 96.7 0.52 1.8E-05 46.4 29.1 248 109-423 69-334 (353)
46 3scy_A Hypothetical bacterial 96.7 0.48 1.7E-05 47.4 24.9 95 110-207 30-125 (361)
47 3ow8_A WD repeat-containing pr 96.7 0.47 1.6E-05 47.2 24.5 135 110-265 103-241 (321)
48 4e54_B DNA damage-binding prot 96.6 0.5 1.7E-05 49.0 24.6 90 111-207 144-236 (435)
49 2pm7_B Protein transport prote 96.5 0.46 1.6E-05 46.4 22.7 104 71-207 18-128 (297)
50 3dsm_A Uncharacterized protein 96.5 0.78 2.7E-05 45.8 24.5 210 153-421 16-243 (328)
51 3ei3_B DNA damage-binding prot 96.4 0.56 1.9E-05 47.2 23.2 133 111-261 98-236 (383)
52 1erj_A Transcriptional repress 96.4 0.81 2.8E-05 46.7 24.6 109 135-266 129-243 (393)
53 3mkq_A Coatomer beta'-subunit; 96.4 0.53 1.8E-05 52.6 24.7 149 69-263 20-174 (814)
54 1got_B GT-beta; complex (GTP-b 96.4 0.96 3.3E-05 45.1 24.6 223 137-424 63-291 (340)
55 2ymu_A WD-40 repeat protein; u 96.3 1 3.4E-05 48.0 25.3 239 111-424 327-570 (577)
56 2aq5_A Coronin-1A; WD40 repeat 96.2 0.83 2.9E-05 46.4 23.5 230 136-423 88-333 (402)
57 3fm0_A Protein CIAO1; WDR39,SG 96.2 0.26 9E-06 49.5 19.2 189 132-377 19-215 (345)
58 3u4y_A Uncharacterized protein 96.2 1 3.5E-05 44.0 25.7 128 110-261 21-160 (331)
59 3dwl_C Actin-related protein 2 96.2 0.072 2.4E-06 53.7 14.9 113 135-263 17-133 (377)
60 1q7f_A NHL, brain tumor CG1071 96.2 0.95 3.2E-05 43.5 24.5 218 137-421 37-268 (286)
61 1r5m_A SIR4-interacting protei 96.2 0.34 1.1E-05 48.9 19.8 150 69-264 115-281 (425)
62 2ovr_B FBW7, F-BOX/WD repeat p 96.2 1.2 4.3E-05 45.8 24.6 131 110-266 180-313 (445)
63 3jrp_A Fusion protein of prote 96.1 0.49 1.7E-05 46.9 20.4 238 137-424 19-277 (379)
64 2pbi_B Guanine nucleotide-bind 96.1 1.4 4.7E-05 44.3 23.8 227 137-424 72-305 (354)
65 4ery_A WD repeat-containing pr 96.0 1.3 4.4E-05 43.1 25.5 137 110-266 88-228 (312)
66 1rwi_B Serine/threonine-protei 96.0 1.1 3.8E-05 42.3 25.1 134 111-265 48-184 (270)
67 1pgu_A Actin interacting prote 95.9 0.48 1.6E-05 50.7 20.6 153 68-266 24-197 (615)
68 1p22_A F-BOX/WD-repeat protein 95.9 1.8 6E-05 44.6 24.0 133 111-266 155-290 (435)
69 1nr0_A Actin interacting prote 95.8 2 6.8E-05 46.8 25.1 136 110-265 213-359 (611)
70 3q7m_A Lipoprotein YFGL, BAMB; 95.8 1.9 6.5E-05 43.4 28.1 243 110-422 114-367 (376)
71 1rwi_B Serine/threonine-protei 95.7 1.4 4.8E-05 41.6 26.0 214 136-423 30-253 (270)
72 2pm9_A Protein WEB1, protein t 95.7 1.9 6.6E-05 43.3 23.3 147 110-268 46-204 (416)
73 2ymu_A WD-40 repeat protein; u 95.7 2.1 7.2E-05 45.4 24.6 240 111-423 286-528 (577)
74 3sfz_A APAF-1, apoptotic pepti 95.7 2 6.9E-05 50.7 26.4 152 68-265 621-778 (1249)
75 3sfz_A APAF-1, apoptotic pepti 95.7 0.74 2.5E-05 54.5 22.6 131 111-263 985-1118(1249)
76 3jro_A Fusion protein of prote 95.7 0.4 1.4E-05 54.1 19.3 90 110-207 32-128 (753)
77 2ynn_A Coatomer subunit beta'; 95.6 0.55 1.9E-05 46.1 18.0 137 110-265 78-221 (304)
78 3scy_A Hypothetical bacterial 95.6 2 7E-05 42.7 23.0 28 238-265 216-246 (361)
79 1erj_A Transcriptional repress 95.6 1.3 4.5E-05 45.1 21.5 152 70-262 131-288 (393)
80 1k8k_C P40, ARP2/3 complex 41 95.6 0.72 2.5E-05 45.7 19.0 110 136-263 15-129 (372)
81 3iz6_a 40S ribosomal protein R 95.5 1.6 5.5E-05 44.2 21.9 233 136-424 73-319 (380)
82 4gga_A P55CDC, cell division c 95.5 0.92 3.2E-05 46.6 20.3 133 110-263 126-263 (420)
83 3dm0_A Maltose-binding peripla 95.5 2.7 9.1E-05 46.4 25.2 87 110-207 406-499 (694)
84 1r5m_A SIR4-interacting protei 95.5 0.94 3.2E-05 45.5 19.7 63 135-207 114-176 (425)
85 3i2n_A WD repeat-containing pr 95.5 1.3 4.6E-05 43.3 20.5 142 110-265 45-203 (357)
86 1ri6_A Putative isomerase YBHE 95.4 2.2 7.4E-05 41.4 24.3 137 111-260 62-208 (343)
87 4h5i_A Guanine nucleotide-exch 95.4 2.7 9.2E-05 42.4 24.5 233 137-424 79-333 (365)
88 3u4y_A Uncharacterized protein 95.4 2.2 7.7E-05 41.5 23.5 141 110-264 63-210 (331)
89 1ri6_A Putative isomerase YBHE 95.3 2.3 7.7E-05 41.3 24.7 141 111-265 17-165 (343)
90 3bg1_A Protein SEC13 homolog; 95.3 0.94 3.2E-05 44.7 18.5 103 72-207 23-132 (316)
91 1l0q_A Surface layer protein; 95.3 2.7 9.3E-05 42.0 23.0 133 110-266 55-194 (391)
92 1nr0_A Actin interacting prote 95.1 4.7 0.00016 43.8 26.2 138 110-266 82-226 (611)
93 3hfq_A Uncharacterized protein 95.0 3.1 0.0001 41.0 22.8 142 110-265 64-224 (347)
94 3bws_A Protein LP49; two-domai 95.0 2.6 8.8E-05 42.9 21.4 136 110-268 192-341 (433)
95 3jro_A Fusion protein of prote 95.0 0.54 1.8E-05 53.0 17.5 238 138-424 18-275 (753)
96 1vyh_C Platelet-activating fac 94.9 2.7 9.1E-05 43.1 21.4 87 111-207 174-261 (410)
97 2xbg_A YCF48-like protein; pho 94.9 3.5 0.00012 41.2 27.7 218 140-423 89-312 (327)
98 3mkq_A Coatomer beta'-subunit; 94.7 6.7 0.00023 43.5 26.3 138 110-266 78-222 (814)
99 3lrv_A PRE-mRNA-splicing facto 94.7 3.5 0.00012 40.8 21.1 110 136-263 132-246 (343)
100 2xbg_A YCF48-like protein; pho 94.7 4 0.00014 40.7 24.1 238 119-423 25-269 (327)
101 2pm7_B Protein transport prote 94.6 3.5 0.00012 40.0 21.2 109 137-262 17-133 (297)
102 1sq9_A Antiviral protein SKI8; 94.6 3 0.0001 41.7 20.3 144 111-268 38-223 (397)
103 3odt_A Protein DOA1; ubiquitin 94.6 3.3 0.00011 39.5 25.2 109 66-207 21-129 (313)
104 2aq5_A Coronin-1A; WD40 repeat 94.5 1.2 4.2E-05 45.1 17.4 135 110-263 105-256 (402)
105 3mbr_X Glutamine cyclotransfer 94.5 3.8 0.00013 39.7 21.9 165 61-268 18-186 (243)
106 2pm9_A Protein WEB1, protein t 94.3 1.9 6.6E-05 43.3 18.2 115 135-268 171-301 (416)
107 3mbr_X Glutamine cyclotransfer 94.0 3.3 0.00011 40.1 18.1 119 129-269 20-141 (243)
108 3mmy_A MRNA export factor; mRN 93.8 5.4 0.00018 38.8 21.7 87 111-207 66-156 (368)
109 3k26_A Polycomb protein EED; W 93.7 2.7 9.2E-05 41.1 17.6 104 141-263 85-194 (366)
110 2ovr_B FBW7, F-BOX/WD repeat p 93.7 7.1 0.00024 40.0 24.2 130 111-266 141-273 (445)
111 3k26_A Polycomb protein EED; W 93.6 5.8 0.0002 38.6 19.8 91 110-207 96-188 (366)
112 2ojh_A Uncharacterized protein 93.6 3.2 0.00011 38.9 17.3 81 110-199 23-104 (297)
113 4g56_B MGC81050 protein; prote 93.5 3.1 0.00011 41.8 17.9 132 111-263 117-260 (357)
114 4aez_A CDC20, WD repeat-contai 93.4 7.3 0.00025 39.3 22.8 137 110-268 157-300 (401)
115 4g56_B MGC81050 protein; prote 93.3 2.3 7.9E-05 42.7 16.5 136 111-265 163-305 (357)
116 4a11_B DNA excision repair pro 93.3 3.9 0.00013 40.6 18.2 112 135-265 49-179 (408)
117 1sq9_A Antiviral protein SKI8; 93.1 6.4 0.00022 39.1 19.6 146 111-268 93-274 (397)
118 3v7d_B Cell division control p 93.1 8.7 0.0003 39.3 25.6 139 110-266 184-346 (464)
119 2dg1_A DRP35, lactonase; beta 93.1 4.5 0.00015 39.5 18.1 117 52-198 35-153 (333)
120 4aow_A Guanine nucleotide-bind 93.1 6.7 0.00023 37.9 22.0 64 135-207 92-155 (340)
121 3q7m_A Lipoprotein YFGL, BAMB; 93.0 8 0.00027 38.6 21.0 112 135-266 48-169 (376)
122 1jmx_B Amine dehydrogenase; ox 92.9 2 6.7E-05 42.0 15.1 141 110-268 22-182 (349)
123 4ggc_A P55CDC, cell division c 92.9 6.7 0.00023 37.4 21.0 132 111-263 47-183 (318)
124 2z2n_A Virginiamycin B lyase; 92.9 6.5 0.00022 37.2 25.5 131 111-265 80-216 (299)
125 3bg1_A Protein SEC13 homolog; 92.8 3.4 0.00011 40.5 16.7 111 138-265 22-141 (316)
126 1nir_A Nitrite reductase; hemo 92.8 4.9 0.00017 43.4 19.2 79 52-161 126-207 (543)
127 4h5i_A Guanine nucleotide-exch 92.8 7.7 0.00026 39.0 19.7 138 110-265 158-304 (365)
128 3fvz_A Peptidyl-glycine alpha- 92.8 8.1 0.00028 38.1 27.0 149 110-268 70-234 (329)
129 1q7f_A NHL, brain tumor CG1071 92.7 3.4 0.00012 39.5 16.2 132 110-260 143-279 (286)
130 4d9s_A UVB-resistance protein 92.7 10 0.00035 39.0 24.6 64 359-427 287-360 (406)
131 3nol_A Glutamine cyclotransfer 92.5 4.1 0.00014 39.8 16.3 118 129-269 42-163 (262)
132 3f3f_A Nucleoporin SEH1; struc 92.5 7.6 0.00026 37.1 23.4 107 71-207 20-139 (351)
133 3frx_A Guanine nucleotide-bind 92.4 8.8 0.0003 37.5 21.6 63 135-207 71-134 (319)
134 2xzm_R RACK1; ribosome, transl 92.3 9.5 0.00032 37.6 22.6 63 135-207 82-145 (343)
135 3vgz_A Uncharacterized protein 92.2 8.9 0.00031 37.2 20.0 138 110-268 165-310 (353)
136 4gqb_B Methylosome protein 50; 92.2 6.7 0.00023 39.3 18.2 135 110-264 104-249 (344)
137 2hqs_A Protein TOLB; TOLB, PAL 92.0 5.4 0.00018 41.1 17.6 137 110-265 204-348 (415)
138 3lrv_A PRE-mRNA-splicing facto 91.6 5 0.00017 39.6 16.4 138 111-265 151-298 (343)
139 1p22_A F-BOX/WD-repeat protein 91.6 13 0.00043 38.0 20.0 133 110-265 194-329 (435)
140 1yfq_A Cell cycle arrest prote 91.6 10 0.00035 36.6 23.2 87 111-207 35-127 (342)
141 3i2n_A WD repeat-containing pr 91.4 8.3 0.00029 37.4 17.6 113 137-263 26-150 (357)
142 3v9f_A Two-component system se 91.1 23 0.00077 39.6 27.6 248 111-423 385-647 (781)
143 4gga_A P55CDC, cell division c 90.7 16 0.00053 37.2 22.7 87 110-207 170-257 (420)
144 3zwl_B Eukaryotic translation 90.6 5.7 0.0002 38.6 15.5 83 110-201 198-281 (369)
145 2iwa_A Glutamine cyclotransfer 90.6 9.6 0.00033 37.2 16.8 117 133-269 24-143 (266)
146 3ei3_B DNA damage-binding prot 90.6 14 0.00049 36.5 21.6 112 135-263 79-196 (383)
147 4gqb_B Methylosome protein 50; 90.4 9.2 0.00032 38.2 17.1 137 110-265 150-293 (344)
148 3nok_A Glutaminyl cyclase; bet 89.7 14 0.00047 36.3 16.8 158 66-268 57-217 (268)
149 1pgu_A Actin interacting prote 89.7 22 0.00077 37.4 21.3 69 130-207 19-93 (615)
150 3v7d_B Cell division control p 89.7 6.7 0.00023 40.2 15.7 132 111-265 292-425 (464)
151 3nol_A Glutamine cyclotransfer 89.6 16 0.00055 35.6 17.8 174 52-268 29-208 (262)
152 2hqs_A Protein TOLB; TOLB, PAL 89.4 20 0.0007 36.6 19.2 136 110-265 248-391 (415)
153 2iwa_A Glutamine cyclotransfer 88.8 18 0.00063 35.2 18.5 161 67-269 24-189 (266)
154 4e54_B DNA damage-binding prot 88.5 23 0.0008 36.0 20.8 133 110-263 188-329 (435)
155 1yfq_A Cell cycle arrest prote 88.5 18 0.00062 34.8 19.6 48 111-162 81-130 (342)
156 2ecf_A Dipeptidyl peptidase IV 88.4 32 0.0011 37.6 25.6 104 66-198 40-170 (741)
157 3e5z_A Putative gluconolactona 88.3 18 0.00062 34.5 18.1 137 110-263 91-248 (296)
158 2dg1_A DRP35, lactonase; beta 88.3 19 0.00066 34.8 23.1 112 135-265 50-175 (333)
159 2vdu_B TRNA (guanine-N(7)-)-me 88.1 21 0.00071 36.6 18.2 90 111-207 222-335 (450)
160 2qc5_A Streptogramin B lactona 88.0 18 0.00061 34.0 25.8 132 111-265 85-221 (300)
161 3frx_A Guanine nucleotide-bind 87.8 18 0.00063 35.1 16.8 136 110-266 88-232 (319)
162 4aow_A Guanine nucleotide-bind 87.8 9.1 0.00031 36.9 14.4 138 110-263 196-339 (340)
163 1nir_A Nitrite reductase; hemo 87.3 34 0.0012 36.6 23.9 212 110-375 201-439 (543)
164 3f3f_A Nucleoporin SEH1; struc 87.2 20 0.0007 33.9 22.8 115 137-263 19-145 (351)
165 3dm0_A Maltose-binding peripla 85.7 12 0.00041 41.1 15.5 139 110-265 453-596 (694)
166 3g4e_A Regucalcin; six bladed 85.2 22 0.00076 34.2 15.7 143 111-268 75-236 (297)
167 2vdu_B TRNA (guanine-N(7)-)-me 84.2 39 0.0013 34.4 22.9 138 111-268 127-278 (450)
168 3fvz_A Peptidyl-glycine alpha- 84.0 33 0.0011 33.5 30.2 118 135-263 29-177 (329)
169 2xzm_R RACK1; ribosome, transl 82.2 39 0.0013 32.9 16.4 50 110-162 99-148 (343)
170 1pjx_A Dfpase, DIISOPROPYLFLUO 79.9 42 0.0014 31.8 22.0 64 136-207 24-97 (314)
171 3vu4_A KMHSV2; beta-propeller 79.1 15 0.00051 36.5 11.9 49 111-162 220-270 (355)
172 2hes_X YDR267CP; beta-propelle 77.7 30 0.001 33.7 13.6 98 306-424 118-220 (330)
173 3e5z_A Putative gluconolactona 76.6 52 0.0018 31.1 24.4 111 52-196 18-131 (296)
174 1w8o_A Bacterial sialidase; 3D 76.1 54 0.0018 35.3 16.2 175 343-549 245-438 (601)
175 1pby_B Quinohemoprotein amine 76.0 54 0.0018 31.0 16.9 138 110-268 12-170 (337)
176 1tl2_A L10, protein (tachylect 75.7 24 0.00082 33.7 11.3 102 135-250 93-199 (236)
177 3gre_A Serine/threonine-protei 74.3 30 0.001 34.8 12.9 69 134-207 68-138 (437)
178 3dr2_A Exported gluconolactona 73.7 65 0.0022 30.8 15.5 138 110-264 108-270 (305)
179 3nok_A Glutaminyl cyclase; bet 73.3 71 0.0024 31.1 20.2 70 187-269 61-133 (268)
180 1jmx_B Amine dehydrogenase; ox 73.2 12 0.00041 36.1 9.1 86 110-198 66-166 (349)
181 3hrp_A Uncharacterized protein 72.5 88 0.003 31.8 22.3 112 135-265 136-253 (409)
182 2ojh_A Uncharacterized protein 72.3 49 0.0017 30.3 13.0 91 110-207 63-156 (297)
183 3v9f_A Two-component system se 71.3 1.3E+02 0.0044 33.3 21.6 138 111-268 471-617 (781)
184 1kv9_A Type II quinohemoprotei 70.5 1.3E+02 0.0044 32.9 26.9 80 111-196 78-168 (668)
185 3a72_A EXO-arabinanase; arabin 67.6 55 0.0019 33.1 12.9 84 336-420 116-221 (355)
186 3azo_A Aminopeptidase; POP fam 67.2 55 0.0019 35.2 13.7 90 110-207 266-363 (662)
187 3mvd_K Regulator of chromosome 66.9 1.1E+02 0.0039 31.0 18.3 60 135-198 37-101 (423)
188 4a11_B DNA excision repair pro 65.5 62 0.0021 31.5 12.7 106 137-263 107-220 (408)
189 3dw8_B Serine/threonine-protei 64.7 1.2E+02 0.0039 30.2 15.0 121 135-265 232-377 (447)
190 4a2l_A BT_4663, two-component 64.1 1.8E+02 0.0061 32.2 21.5 136 111-268 473-620 (795)
191 3kci_A Probable E3 ubiquitin-p 63.9 46 0.0016 33.8 11.6 63 359-426 223-295 (389)
192 2bkl_A Prolyl endopeptidase; m 63.8 1.7E+02 0.0058 31.8 18.7 117 67-207 125-255 (695)
193 4a2l_A BT_4663, two-component 62.3 1.9E+02 0.0066 31.9 36.5 252 110-423 378-650 (795)
194 3odt_A Protein DOA1; ubiquitin 61.0 58 0.002 30.4 11.1 86 110-207 206-292 (313)
195 2p4o_A Hypothetical protein; p 61.0 97 0.0033 29.7 13.0 100 65-196 34-133 (306)
196 2xyi_A Probable histone-bindin 60.9 1.4E+02 0.0048 30.0 19.7 114 135-261 187-309 (430)
197 2fp8_A Strictosidine synthase; 57.7 1.4E+02 0.0046 28.7 20.3 135 111-263 103-271 (322)
198 3c5m_A Oligogalacturonate lyas 57.5 65 0.0022 31.4 11.2 57 110-172 265-335 (396)
199 3ott_A Two-component system se 56.6 2.3E+02 0.0078 31.1 16.6 126 111-261 495-626 (758)
200 3g4e_A Regucalcin; six bladed 55.8 42 0.0014 32.1 9.2 75 110-196 36-114 (297)
201 2j04_A TAU60, YPL007P, hypothe 54.7 1.5E+02 0.0053 32.1 14.0 151 66-264 88-257 (588)
202 3gre_A Serine/threonine-protei 54.0 27 0.00092 35.2 7.7 50 110-162 193-244 (437)
203 3hrp_A Uncharacterized protein 53.9 1.9E+02 0.0065 29.3 18.7 156 66-262 134-299 (409)
204 3o4h_A Acylamino-acid-releasin 52.6 19 0.00065 38.3 6.5 89 110-207 176-272 (582)
205 2p9w_A MAL S 1 allergenic prot 51.4 1.4E+02 0.0049 29.9 12.3 88 333-423 99-204 (334)
206 2z3z_A Dipeptidyl aminopeptida 50.7 2.6E+02 0.0089 29.9 17.4 134 110-263 285-437 (706)
207 3dw8_B Serine/threonine-protei 50.7 47 0.0016 33.2 8.9 64 134-207 290-369 (447)
208 2ad6_A Methanol dehydrogenase 49.7 1.5E+02 0.0051 31.7 13.2 26 241-266 60-90 (571)
209 1pjx_A Dfpase, DIISOPROPYLFLUO 47.2 1.3E+02 0.0045 28.1 11.2 81 110-198 47-135 (314)
210 4ggc_A P55CDC, cell division c 47.2 1.8E+02 0.0061 27.0 22.0 87 110-207 90-177 (318)
211 2ghs_A AGR_C_1268P; regucalcin 46.2 1.3E+02 0.0044 29.1 11.1 75 110-196 72-150 (326)
212 3azo_A Aminopeptidase; POP fam 44.5 1.2E+02 0.0041 32.4 11.5 92 110-207 218-319 (662)
213 1k32_A Tricorn protease; prote 44.3 99 0.0034 35.7 11.3 84 110-199 401-491 (1045)
214 1w6s_A Methanol dehydrogenase 40.4 1.4E+02 0.0047 32.4 11.1 147 240-424 59-262 (599)
215 3c5m_A Oligogalacturonate lyas 39.6 91 0.0031 30.3 8.8 81 110-198 217-301 (396)
216 1tl2_A L10, protein (tachylect 39.6 1.1E+02 0.0037 29.2 8.7 102 137-250 48-152 (236)
217 2ad6_A Methanol dehydrogenase 38.5 1.3E+02 0.0044 32.3 10.4 83 111-198 75-168 (571)
218 3o4h_A Acylamino-acid-releasin 38.0 79 0.0027 33.3 8.6 81 111-200 134-215 (582)
219 2vov_A MOPE, surface-associate 37.7 39 0.0013 31.0 5.0 34 525-564 278-332 (336)
220 2j04_A TAU60, YPL007P, hypothe 37.4 4.3E+02 0.015 28.6 15.4 125 110-259 152-295 (588)
221 1pby_B Quinohemoprotein amine 36.4 2.7E+02 0.0091 25.9 12.8 111 142-268 2-131 (337)
222 3mmy_A MRNA export factor; mRN 35.3 25 0.00086 33.8 3.7 58 68-150 279-336 (368)
223 2z3z_A Dipeptidyl aminopeptida 34.8 2E+02 0.007 30.8 11.4 85 109-200 335-421 (706)
224 2w18_A PALB2, fancn, partner a 34.7 3.5E+02 0.012 27.2 12.2 144 73-260 192-356 (356)
225 2ecf_A Dipeptidyl peptidase IV 33.9 2.5E+02 0.0085 30.3 12.0 89 110-207 313-409 (741)
226 1flg_A Protein (quinoprotein e 33.8 2.3E+02 0.0078 30.4 11.5 27 240-266 65-94 (582)
227 3pe7_A Oligogalacturonate lyas 33.6 1.3E+02 0.0045 29.2 8.9 60 110-172 265-335 (388)
228 1kb0_A Quinohemoprotein alcoho 32.7 5.1E+02 0.017 28.1 14.8 25 241-265 75-102 (677)
229 1yiq_A Quinohemoprotein alcoho 32.6 5.2E+02 0.018 28.1 22.7 80 111-196 82-173 (689)
230 1w8o_A Bacterial sialidase; 3D 32.1 2.1E+02 0.0071 30.6 10.8 125 118-250 199-339 (601)
231 1jof_A Carboxy-CIS,CIS-muconat 30.9 1.8E+02 0.006 28.4 9.4 49 110-160 168-221 (365)
232 3pe7_A Oligogalacturonate lyas 30.5 2.5E+02 0.0084 27.1 10.4 50 110-162 61-110 (388)
233 1k32_A Tricorn protease; prote 30.1 2.8E+02 0.0097 31.7 12.1 82 110-200 359-441 (1045)
234 2xdw_A Prolyl endopeptidase; a 29.9 3E+02 0.01 29.7 11.9 109 67-199 129-252 (710)
235 3tc9_A Hypothetical hydrolase; 29.4 2.3E+02 0.0077 29.0 10.1 59 132-197 228-288 (430)
236 2xyi_A Probable histone-bindin 29.4 1.8E+02 0.0061 29.2 9.3 89 110-207 255-349 (430)
237 3vu4_A KMHSV2; beta-propeller 29.2 73 0.0025 31.3 6.0 63 135-207 201-267 (355)
238 2vsd_A CHIR AB1; immune system 27.0 2.3E+02 0.0077 22.3 7.8 40 456-501 4-43 (105)
239 1kv9_A Type II quinohemoprotei 26.7 3.3E+02 0.011 29.6 11.4 25 241-265 64-91 (668)
240 2oiz_A Aromatic amine dehydrog 26.2 1.3E+02 0.0045 29.7 7.4 74 109-192 286-360 (361)
241 3hxj_A Pyrrolo-quinoline quino 26.1 4E+02 0.014 24.8 20.1 228 111-423 42-274 (330)
242 2b4w_A Hypothetical protein, c 25.8 2.7E+02 0.0093 27.3 8.9 99 71-197 38-149 (315)
243 1npe_A Nidogen, entactin; glyc 25.3 3.9E+02 0.013 24.4 18.7 138 111-269 103-246 (267)
244 1jof_A Carboxy-CIS,CIS-muconat 25.0 3E+02 0.01 26.6 9.9 69 134-207 258-337 (365)
245 3mvd_K Regulator of chromosome 22.5 3E+02 0.01 27.7 9.5 64 359-427 304-377 (423)
246 3kgr_A LAIR-1, hlair1, leukocy 22.3 1.6E+02 0.0054 23.4 5.9 41 456-502 8-48 (106)
247 1qks_A Cytochrome CD1 nitrite 21.4 3.3E+02 0.011 29.1 9.8 88 110-207 178-271 (567)
248 1zxq_A ICAM-2, intercellular a 21.3 1.5E+02 0.0053 27.0 6.1 51 438-499 79-129 (192)
249 2xzi_A KDNAse, extracellular s 21.3 2.5E+02 0.0087 28.2 8.5 120 52-196 216-352 (386)
250 1xfd_A DIP, dipeptidyl aminope 20.7 4.8E+02 0.017 27.7 11.2 76 67-162 65-142 (723)
251 3bn3_B ICAM-5, intercellular a 20.7 3.4E+02 0.012 24.7 8.4 52 438-500 80-131 (196)
252 1kb0_A Quinohemoprotein alcoho 20.5 8.3E+02 0.028 26.4 24.3 83 111-198 89-182 (677)
253 4hw6_A Hypothetical protein, I 20.3 5.3E+02 0.018 26.2 10.9 60 131-197 229-291 (433)
No 1
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=100.00 E-value=5.3e-73 Score=641.19 Aligned_cols=438 Identities=21% Similarity=0.314 Sum_probs=341.3
Q ss_pred CCCCceEEccCCCccceeEEEEee-CCeEEEEeccCCCCCCCCCCCCccccCCCCCCCcccceEEEEECCCCcEEeCcCC
Q 048017 49 KSGGQWVLLQSSIGISAMHMQVLN-NDKVIIFDRTDMGPSNLSLPIDKCRKEGDVGQLDCTAHSVLYDIASNTFRPLLLQ 127 (566)
Q Consensus 49 ~~~g~W~~l~~~~~~~a~h~~~l~-~gkV~~~gg~~~~~s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~ 127 (566)
+..++|+.+++++ ....|+++++ +||||++||..... + |.. . .....+.+|||.+++|+.++.+
T Consensus 173 p~~~~W~~~~~~P-~~~~~~av~~~~g~l~v~GG~~~~~--~----~~~-----~---~~~~~~~~yd~~t~~w~~~~~~ 237 (656)
T 1k3i_A 173 PGLGRWGPTIDLP-IVPAAAAIEPTSGRVLMWSSYRNDA--F----GGS-----P---GGITLTSSWDPSTGIVSDRTVT 237 (656)
T ss_dssp TTSCEEEEEEECS-SCCSEEEEETTTTEEEEEEECCCTT--T----CSC-----C---CSEEEEEEECTTTCCBCCCEEE
T ss_pred CCCCeeeeeccCC-CCceeEEEEecCCEEEEEecccccc--c----ccC-----C---CCeEEEEEEeCCCCcEEeCccc
Confidence 5568999987654 4667888887 99999999975211 0 000 0 0124689999999999988765
Q ss_pred ---CcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEecCCcEEEEcCc-cC--
Q 048017 128 ---TDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILPDNRIIVVGGR-RV-- 201 (566)
Q Consensus 128 ---~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyvvGG~-~~-- 201 (566)
+..+|++.+++.||+||++||... .++++|||. +++|+++++ |+.+||+|++++++||+|||+||. +.
T Consensus 238 ~~~~~~~~~~~~~~~~g~lyv~GG~~~--~~v~~yd~~---t~~W~~~~~-~~~~R~~~s~~~~~dg~iyv~GG~~~~~~ 311 (656)
T 1k3i_A 238 VTKHDMFCPGISMDGNGQIVVTGGNDA--KKTSLYDSS---SDSWIPGPD-MQVARGYQSSATMSDGRVFTIGGSWSGGV 311 (656)
T ss_dssp ECSCCCSSCEEEECTTSCEEEECSSST--TCEEEEEGG---GTEEEECCC-CSSCCSSCEEEECTTSCEEEECCCCCSSS
T ss_pred CCCCCCccccccCCCCCCEEEeCCCCC--CceEEecCc---CCceeECCC-CCccccccceEEecCCeEEEEeCcccCCc
Confidence 566888888889999999999753 479999999 899999997 999999999999989999999995 32
Q ss_pred --CeEEEE-eCCCCCCCeeee------ccccccCCCCCCCCccceEEEecCCcEEEEEcC-----------eeEEEeccC
Q 048017 202 --FTYEFY-PKIDSLSSSLYL------RFLIETRDPGEENNLYPFLHLLPDGNLFIFANR-----------RSILFDYIN 261 (566)
Q Consensus 202 --~s~E~y-P~~~~~~~w~~~------p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~-----------~~e~yDp~t 261 (566)
.++|+| |.++ .|... |+...+ .. +.+..+++||++||. .+++||+++
T Consensus 312 ~~~~~e~yd~~t~---~W~~~~~~~~~p~~~~~---------~~-~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~ 378 (656)
T 1k3i_A 312 FEKNGEVYSPSSK---TWTSLPNAKVNPMLTAD---------KQ-GLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSG 378 (656)
T ss_dssp CCCCEEEEETTTT---EEEEETTSCSGGGCCCC---------TT-GGGTTTCSCCEEECGGGCEEECCSSSEEEEEECST
T ss_pred ccccceEeCCCCC---cceeCCCcccccccccc---------cc-ceeecCCceEEEECCCCcEEEecCccceeeeecCC
Confidence 478999 8765 78764 333221 11 123468889998863 468999999
Q ss_pred CeEEEeecccCCCC-CCccCCCCceeeecccccCCCCCCCCCCCCCCEEEEEcCCCCCccccccccccccccCC---eeE
Q 048017 262 NKLVKEFPVIPGND-KRNYPSTGSSILLPVKLSAGSDGNGTAALPDAEVMVCGGAPAGAFIKSDKESVYVEASR---TCG 337 (566)
Q Consensus 262 ~~W~~~~p~lp~~~-~r~~~~~g~avllpl~~~~~~~~~~y~~~~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~---s~~ 337 (566)
++|.......+... ....+..+++++++.. +++||++||.+... ...+++ +++
T Consensus 379 ~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~--------------~~~i~v~GG~~~~~---------~~~~~~~~~~v~ 435 (656)
T 1k3i_A 379 SGDVKSAGKRQSNRGVAPDAMCGNAVMYDAV--------------KGKILTFGGSPDYQ---------DSDATTNAHIIT 435 (656)
T ss_dssp TCEEEEEEECEETTEECCCCBTCEEEEEETT--------------TTEEEEECCBSSSS---------SSBCCCCEEEEE
T ss_pred cceeecCCccccccccCCCCCCCceEeccCC--------------CCeEEEEeCCCCCC---------CCCcCCcceEEE
Confidence 99985332111100 0001234677776532 79999999975211 012345 455
Q ss_pred EEEeeCCCCCeEEe---ccCCCcccceeEEccCCeEEEEcCCCCCCC-------CCccccCc-CCcEEeccCCCCCCcce
Q 048017 338 RLKVTDKYPVWSME---FMPMPRVMSDMLLLPSGDVIIINGASNGTA-------GWEDAEEP-DRRFVVLNPSKIPRMYH 406 (566)
Q Consensus 338 ~~d~~~~~~~W~~~---~M~~~R~~~~~vvLpdG~V~vvGG~~~g~~-------~~~~~ydP-t~~Wt~~~~~~~~R~yh 406 (566)
+||+. .++|+.. +|+.+|.++++++++||+|||+||.+.+.. ...++||| +++|+.+++|+++|+||
T Consensus 436 ~yd~~--~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~h 513 (656)
T 1k3i_A 436 LGEPG--TSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYH 513 (656)
T ss_dssp CCSTT--SCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTT
T ss_pred cCCCC--CCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccc
Confidence 56654 4789863 899999999999999999999999764321 12358999 99999999999999999
Q ss_pred eEEEEcCCCcEEEecCCCCcccccCCCCCCCcceEEEEeccccCC--CCCCCCCceee-cCCccceeecCCeEEEEEEec
Q 048017 407 SSAVVLPDGRILVGGSNPHRRYNFTAYPYPTDLSLEAFHPHYLDP--ENAYMRPSILS-LESIDRTVSYNEVFAVTFELS 483 (566)
Q Consensus 407 s~a~LlpdG~V~v~GG~~~~~~~~~~~~~~~~~~vE~y~Ppyl~~--~~~~~RP~i~~-~p~~~~~~~~g~~~~v~~~~~ 483 (566)
|++++|+||+|||+||+.|+.+. +.++++|+|+||||++ +.++.||+|++ +| +++.||++|+|+++.
T Consensus 514 s~a~ll~dg~v~v~GG~~~~~~~------~~~~~~e~~~Ppyl~~~~~~~~~rP~i~~~~~---~~~~~g~~~~~~~~~- 583 (656)
T 1k3i_A 514 SISLLLPDGRVFNGGGGLCGDCT------TNHFDAQIFTPNYLYNSNGNLATRPKITRTST---QSVKVGGRITISTDS- 583 (656)
T ss_dssp EEEEECTTSCEEEEECCCCTTCS------CCCCEEEEEECGGGBCTTSSBCCCCCEEEESC---SEEETTCEEEEEESS-
T ss_pred cHhhcCCCcEEEecCCCCCCCCC------CCeeEEEEEeChhhccCCCCcCCCCcccccCC---ceecCCCEEEEEEec-
Confidence 99999999999999999887542 3688999999999986 46678999999 48 899999999998852
Q ss_pred CCCCCcceEEEEEccCccccCCCCCcceEEeeeeeeeecccceEEEEEEcCCCCCcCCCcceEEEEEc-CCCCcccEEEE
Q 048017 484 SYSPSGEISVSLMTPSFTTHSFAMNQRLVVLNVVSVSQLSVYAYKVVVNGPPTATVAPPGYYMMFVVH-AGIPSHAVWVK 562 (566)
Q Consensus 484 ~~~~~~~~~v~l~~~~~~THs~n~~QR~v~L~~~~~~~~g~~~~~~~v~~P~~~~~~ppG~ymlfv~~-~gvPS~a~~v~ 562 (566)
.+.+|+|||++|+||++|||||+|+|+++. .|+ .+++|++|||++||||||||||||+ +||||+|+||+
T Consensus 584 -----~~~~~~l~~~~~~th~~~~~qr~~~l~~~~---~~~--~~~~~~~p~~~~~~ppg~y~lf~~~~~g~ps~~~~v~ 653 (656)
T 1k3i_A 584 -----SISKASLIRYGTATHTVNTDQRRIPLTLTN---NGG--NSYSFQVPSDSGVALPGYWMLFVMNSAGVPSVASTIR 653 (656)
T ss_dssp -----CCSEEEEEECCEEETTBCSSCCEEECCEEE---EET--TEEEEECCSCTTTSCSEEEEEEEECTTSCBCCCEEEE
T ss_pred -----cceEEEEEecCccccCcCCCCcEEecceEe---cCC--CEEEEECCCCCCcCCCcCeEEEEECCCCcccccEEEE
Confidence 467999999999999999999999999986 232 4789999999999999999999996 99999999999
Q ss_pred EEe
Q 048017 563 VTW 565 (566)
Q Consensus 563 v~~ 565 (566)
|+.
T Consensus 654 ~~~ 656 (656)
T 1k3i_A 654 VTQ 656 (656)
T ss_dssp EEC
T ss_pred EeC
Confidence 973
No 2
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=1.2e-33 Score=289.09 Aligned_cols=276 Identities=14% Similarity=0.124 Sum_probs=210.3
Q ss_pred CccceeEEEEeeCCeEEEEeccCCCCCCCCCCCCccccCCCCCCCcccceEEEEECCCCcEEeCcCCCcccccCCeecCC
Q 048017 61 IGISAMHMQVLNNDKVIIFDRTDMGPSNLSLPIDKCRKEGDVGQLDCTAHSVLYDIASNTFRPLLLQTDTWCSSGAVLSD 140 (566)
Q Consensus 61 ~~~~a~h~~~l~~gkV~~~gg~~~~~s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~d 140 (566)
...+..|.++..+++||++||.+ +. ....+++||+.+++|+.++.++..++..++++.+
T Consensus 12 ~~~~~~~~~~~~~~~i~v~GG~~-~~--------------------~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~ 70 (308)
T 1zgk_A 12 GLVPRGSHAPKVGRLIYTAGGYF-RQ--------------------SLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVG 70 (308)
T ss_dssp ---------CCCCCCEEEECCBS-SS--------------------BCCCEEEEETTTTEEEECCCCSSCCBSCEEEEET
T ss_pred CeeeCCccccCCCCEEEEEeCcC-CC--------------------CcceEEEEcCCCCeEeECCCCCcccccceEEEEC
Confidence 45567788888999999999973 11 1235899999999999998887777776777779
Q ss_pred CcEEEEcCC----CC--CCCeEEEEcCCCCCCCcccccCcccccccCcceEEEecCCcEEEEcCccC----CeEEEE-eC
Q 048017 141 GTLVQTGGY----NV--GDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILPDNRIIVVGGRRV----FTYEFY-PK 209 (566)
Q Consensus 141 G~l~vvGG~----~~--g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyvvGG~~~----~s~E~y-P~ 209 (566)
++||++||. .. ..+.+++|||. +++|+++++ |+.+|.+++++++ +|+|||+||... ..+|+| |.
T Consensus 71 ~~lyv~GG~~~~~~~~~~~~~~~~~d~~---~~~W~~~~~-~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~ 145 (308)
T 1zgk_A 71 GLLYAVGGRNNSPDGNTDSSALDCYNPM---TNQWSPCAP-MSVPRNRIGVGVI-DGHIYAVGGSHGCIHHNSVERYEPE 145 (308)
T ss_dssp TEEEEECCEEEETTEEEECCCEEEEETT---TTEEEECCC-CSSCCBTCEEEEE-TTEEEEECCEETTEECCCEEEEETT
T ss_pred CEEEEECCCcCCCCCCeecceEEEECCC---CCeEeECCC-CCcCccccEEEEE-CCEEEEEcCCCCCcccccEEEECCC
Confidence 999999997 31 25789999999 899999998 9999999999988 899999999764 368899 87
Q ss_pred CCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEcC-------eeEEEeccCCeEEEeecccCCCCCCccCCC
Q 048017 210 IDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANR-------RSILFDYINNKLVKEFPVIPGNDKRNYPST 282 (566)
Q Consensus 210 ~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~-------~~e~yDp~t~~W~~~~p~lp~~~~r~~~~~ 282 (566)
++ .|...+.+.. ..+.++.+..+++||++||. ++++||+.+++|+ .++++|. +|..+
T Consensus 146 ~~---~W~~~~~~p~--------~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-~~~~~p~--~r~~~-- 209 (308)
T 1zgk_A 146 RD---EWHLVAPMLT--------RRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWR-MITAMNT--IRSGA-- 209 (308)
T ss_dssp TT---EEEECCCCSS--------CCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEE-ECCCCSS--CCBSC--
T ss_pred CC---eEeECCCCCc--------cccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEe-eCCCCCC--ccccc--
Confidence 65 7875533221 12234455669999999983 4899999999998 5787765 46542
Q ss_pred CceeeecccccCCCCCCCCCCCCCCEEEEEcCCCCCccccccccccccccCCeeEEEEeeCCCCCeEEe-ccCCCcccce
Q 048017 283 GSSILLPVKLSAGSDGNGTAALPDAEVMVCGGAPAGAFIKSDKESVYVEASRTCGRLKVTDKYPVWSME-FMPMPRVMSD 361 (566)
Q Consensus 283 g~avllpl~~~~~~~~~~y~~~~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~ 361 (566)
+++++ +++||++||.+... .++++++||+. +++|+.. +|+.+|..++
T Consensus 210 ~~~~~------------------~~~iyv~GG~~~~~------------~~~~v~~yd~~--~~~W~~~~~~p~~r~~~~ 257 (308)
T 1zgk_A 210 GVCVL------------------HNCIYAAGGYDGQD------------QLNSVERYDVE--TETWTFVAPMKHRRSALG 257 (308)
T ss_dssp EEEEE------------------TTEEEEECCBCSSS------------BCCCEEEEETT--TTEEEECCCCSSCCBSCE
T ss_pred eEEEE------------------CCEEEEEeCCCCCC------------ccceEEEEeCC--CCcEEECCCCCCCccceE
Confidence 22332 78999999976321 25789999987 5899998 9999999999
Q ss_pred eEEccCCeEEEEcCCCCCCC-CCccccCc-CCcEEeccCCCCCCcceeEEEE
Q 048017 362 MLLLPSGDVIIINGASNGTA-GWEDAEEP-DRRFVVLNPSKIPRMYHSSAVV 411 (566)
Q Consensus 362 ~vvLpdG~V~vvGG~~~g~~-~~~~~ydP-t~~Wt~~~~~~~~R~yhs~a~L 411 (566)
++++ +++||++||.+.... ...++||| +++|+.+++|+.+|.+|++++|
T Consensus 258 ~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~l 308 (308)
T 1zgk_A 258 ITVH-QGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTRMTSGRSGVGVAVT 308 (308)
T ss_dssp EEEE-TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEC
T ss_pred EEEE-CCEEEEEcCcCCCcccceEEEEcCCCCEEeecCCCCCCcccceeEeC
Confidence 8776 999999999763211 11258999 9999999999999999987764
No 3
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=2.2e-33 Score=285.74 Aligned_cols=274 Identities=16% Similarity=0.248 Sum_probs=208.8
Q ss_pred EEEEeeCCeEEEEeccCCCCCCCCCCCCccccCCCCCCCcccceEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEE
Q 048017 67 HMQVLNNDKVIIFDRTDMGPSNLSLPIDKCRKEGDVGQLDCTAHSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQT 146 (566)
Q Consensus 67 h~~~l~~gkV~~~gg~~~~~s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vv 146 (566)
+..+..+++||++||.+. . ....+++||+.+++|+.++.++..++..+++..+++||++
T Consensus 9 r~~~~~~~~i~v~GG~~~-~--------------------~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~ 67 (302)
T 2xn4_A 9 RTPMNLPKLMVVVGGQAP-K--------------------AIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAV 67 (302)
T ss_dssp ------CEEEEEECCBSS-S--------------------BCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEE
T ss_pred CcccCCCCEEEEECCCCC-C--------------------CCCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEE
Confidence 344445889999999752 1 1235889999999999998887777776777779999999
Q ss_pred cCCCC--CCCeEEEEcCCCCCCCcccccCcccccccCcceEEEecCCcEEEEcCccC----CeEEEE-eCCCCCCCeeee
Q 048017 147 GGYNV--GDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILPDNRIIVVGGRRV----FTYEFY-PKIDSLSSSLYL 219 (566)
Q Consensus 147 GG~~~--g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyvvGG~~~----~s~E~y-P~~~~~~~w~~~ 219 (566)
||... ..+.+++|||. +++|+++++ |+.+|.+++++++ +|+|||+||.+. .++|+| |.++ .|...
T Consensus 68 GG~~~~~~~~~~~~~d~~---~~~W~~~~~-~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~---~W~~~ 139 (302)
T 2xn4_A 68 GGFNGSLRVRTVDSYDPV---KDQWTSVAN-MRDRRSTLGAAVL-NGLLYAVGGFDGSTGLSSVEAYNIKSN---EWFHV 139 (302)
T ss_dssp SCBCSSSBCCCEEEEETT---TTEEEEECC-CSSCCBSCEEEEE-TTEEEEEEEECSSCEEEEEEEEETTTT---EEEEE
T ss_pred eCcCCCccccceEEECCC---CCceeeCCC-CCccccceEEEEE-CCEEEEEcCCCCCccCceEEEEeCCCC---eEeec
Confidence 99753 35789999999 899999998 9999999999988 899999999764 257889 7765 78754
Q ss_pred ccccccCCCCCCCCccceEEEecCCcEEEEEcC---------eeEEEeccCCeEEEeecccCCCCCCccCCCCceeeecc
Q 048017 220 RFLIETRDPGEENNLYPFLHLLPDGNLFIFANR---------RSILFDYINNKLVKEFPVIPGNDKRNYPSTGSSILLPV 290 (566)
Q Consensus 220 p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~---------~~e~yDp~t~~W~~~~p~lp~~~~r~~~~~g~avllpl 290 (566)
+.+.. ..+.++.+..+++||++||. ++++||+.+++|+ .++++|. +|..+ +++++
T Consensus 140 ~~~p~--------~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~--~r~~~--~~~~~--- 203 (302)
T 2xn4_A 140 APMNT--------RRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWT-YIAEMST--RRSGA--GVGVL--- 203 (302)
T ss_dssp CCCSS--------CCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEE-EECCCSS--CCBSC--EEEEE---
T ss_pred CCCCC--------cccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEE-ECCCCcc--ccccc--cEEEE---
Confidence 43321 12334556679999999983 4789999999999 5777765 46542 22332
Q ss_pred cccCCCCCCCCCCCCCCEEEEEcCCCCCccccccccccccccCCeeEEEEeeCCCCCeEEe-ccCCCcccceeEEccCCe
Q 048017 291 KLSAGSDGNGTAALPDAEVMVCGGAPAGAFIKSDKESVYVEASRTCGRLKVTDKYPVWSME-FMPMPRVMSDMLLLPSGD 369 (566)
Q Consensus 291 ~~~~~~~~~~y~~~~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvLpdG~ 369 (566)
+++||++||.+... .++++++||+. +++|+.. +|+.+|..+.++++ +++
T Consensus 204 ---------------~~~iyv~GG~~~~~------------~~~~~~~yd~~--~~~W~~~~~~~~~r~~~~~~~~-~~~ 253 (302)
T 2xn4_A 204 ---------------NNLLYAVGGHDGPL------------VRKSVEVYDPT--TNAWRQVADMNMCRRNAGVCAV-NGL 253 (302)
T ss_dssp ---------------TTEEEEECCBSSSS------------BCCCEEEEETT--TTEEEEECCCSSCCBSCEEEEE-TTE
T ss_pred ---------------CCEEEEECCCCCCc------------ccceEEEEeCC--CCCEeeCCCCCCccccCeEEEE-CCE
Confidence 78999999975321 25789999987 5899998 99999999987766 999
Q ss_pred EEEEcCCCCCCC-CCccccCc-CCcEEecc-CCCCCCcceeEEEEcCCCcE
Q 048017 370 VIIINGASNGTA-GWEDAEEP-DRRFVVLN-PSKIPRMYHSSAVVLPDGRI 417 (566)
Q Consensus 370 V~vvGG~~~g~~-~~~~~ydP-t~~Wt~~~-~~~~~R~yhs~a~LlpdG~V 417 (566)
||++||.+.... ...++||| +++|+.++ +|+.+|.+|+++++ +++|
T Consensus 254 i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~r~~~~~~~~--~~~i 302 (302)
T 2xn4_A 254 LYVVGGDDGSCNLASVEYYNPTTDKWTVVSSCMSTGRSYAGVTVI--DKRL 302 (302)
T ss_dssp EEEECCBCSSSBCCCEEEEETTTTEEEECSSCCSSCCBSCEEEEE--EC--
T ss_pred EEEECCcCCCcccccEEEEcCCCCeEEECCcccCcccccceEEEe--cccC
Confidence 999999763211 12358999 99999997 89999999998887 6654
No 4
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=2.3e-32 Score=278.67 Aligned_cols=264 Identities=12% Similarity=0.141 Sum_probs=208.8
Q ss_pred CCeEEEEeccCCCCCCCCCCCCccccCCCCCCCcccceEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCC-C
Q 048017 73 NDKVIIFDRTDMGPSNLSLPIDKCRKEGDVGQLDCTAHSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYN-V 151 (566)
Q Consensus 73 ~gkV~~~gg~~~~~s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~-~ 151 (566)
.++||++||... ...+++|||.+++|+.++.++..++..++++.+++||++||.. .
T Consensus 11 ~~~l~~~GG~~~-----------------------~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~ 67 (306)
T 3ii7_A 11 HDYRIALFGGSQ-----------------------PQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLF 67 (306)
T ss_dssp CCEEEEEECCSS-----------------------TTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSS
T ss_pred cceEEEEeCCCC-----------------------CceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCC
Confidence 478999999641 1247899999999999998888888778888899999999976 2
Q ss_pred CCCeEEEEcCCCCCCCcccccCcccccccCcceEEEecCCcEEEEcCcc-C----CeEEEE-eCCCCCCCeeeecccccc
Q 048017 152 GDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILPDNRIIVVGGRR-V----FTYEFY-PKIDSLSSSLYLRFLIET 225 (566)
Q Consensus 152 g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyvvGG~~-~----~s~E~y-P~~~~~~~w~~~p~l~~~ 225 (566)
..+.+++|||. +++|+++++ |+.+|..++++++ +++|||+||.+ . ..+|+| |.++ .|...+.+..
T Consensus 68 ~~~~~~~~d~~---~~~W~~~~~-~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~~~---~W~~~~~~p~- 138 (306)
T 3ii7_A 68 PIKRMDCYNVV---KDSWYSKLG-PPTPRDSLAACAA-EGKIYTSGGSEVGNSALYLFECYDTRTE---SWHTKPSMLT- 138 (306)
T ss_dssp BCCEEEEEETT---TTEEEEEEC-CSSCCBSCEEEEE-TTEEEEECCBBTTBSCCCCEEEEETTTT---EEEEECCCSS-
T ss_pred CcceEEEEeCC---CCeEEECCC-CCccccceeEEEE-CCEEEEECCCCCCCcEeeeEEEEeCCCC---ceEeCCCCcC-
Confidence 35789999999 899999988 9999999999988 89999999986 2 368899 8765 7875543321
Q ss_pred CCCCCCCCccceEEEecCCcEEEEEcC-----------eeEEEeccCCeEEEeecccCCCCCCccCCCCceeeecccccC
Q 048017 226 RDPGEENNLYPFLHLLPDGNLFIFANR-----------RSILFDYINNKLVKEFPVIPGNDKRNYPSTGSSILLPVKLSA 294 (566)
Q Consensus 226 ~d~~~~~~~yp~~~~l~~G~Ifv~Gg~-----------~~e~yDp~t~~W~~~~p~lp~~~~r~~~~~g~avllpl~~~~ 294 (566)
..+.++.+..+++||++||. ++++||+++++|+ .++++|. +|..+ +++++
T Consensus 139 -------~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~--~r~~~--~~~~~------- 199 (306)
T 3ii7_A 139 -------QRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWT-ELCPMIE--ARKNH--GLVFV------- 199 (306)
T ss_dssp -------CCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEE-EECCCSS--CCBSC--EEEEE-------
T ss_pred -------CcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEE-ECCCccc--hhhcc--eEEEE-------
Confidence 12334456679999999983 3789999999998 5886665 46542 22332
Q ss_pred CCCCCCCCCCCCCEEEEEcCCCCCccccccccccccccCCeeEEEEeeCCCCCeEEe-ccCCCcccceeEEccCCeEEEE
Q 048017 295 GSDGNGTAALPDAEVMVCGGAPAGAFIKSDKESVYVEASRTCGRLKVTDKYPVWSME-FMPMPRVMSDMLLLPSGDVIII 373 (566)
Q Consensus 295 ~~~~~~y~~~~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvLpdG~V~vv 373 (566)
+++||++||.+.. ..++++++||+. +++|+.. +|+.+|..+.++++ +++||++
T Consensus 200 -----------~~~i~v~GG~~~~------------~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~ 253 (306)
T 3ii7_A 200 -----------KDKIFAVGGQNGL------------GGLDNVEYYDIK--LNEWKMVSPMPWKGVTVKCAAV-GSIVYVL 253 (306)
T ss_dssp -----------TTEEEEECCEETT------------EEBCCEEEEETT--TTEEEECCCCSCCBSCCEEEEE-TTEEEEE
T ss_pred -----------CCEEEEEeCCCCC------------CCCceEEEeeCC--CCcEEECCCCCCCccceeEEEE-CCEEEEE
Confidence 7899999997532 125789999987 4899998 99999999998777 9999999
Q ss_pred cCCCCCCC-CCccccCc-CCcEEeccCCCCCCcceeEEEEcC
Q 048017 374 NGASNGTA-GWEDAEEP-DRRFVVLNPSKIPRMYHSSAVVLP 413 (566)
Q Consensus 374 GG~~~g~~-~~~~~ydP-t~~Wt~~~~~~~~R~yhs~a~Llp 413 (566)
||.+.... ....+||| +++|+.+++|+.+|.+|+++++..
T Consensus 254 GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~ 295 (306)
T 3ii7_A 254 AGFQGVGRLGHILEYNTETDKWVANSKVRAFPVTSCLICVVD 295 (306)
T ss_dssp ECBCSSSBCCEEEEEETTTTEEEEEEEEECCSCTTCEEEEEE
T ss_pred eCcCCCeeeeeEEEEcCCCCeEEeCCCcccccceeEEEEECC
Confidence 99762211 11257999 999999999999999999888743
No 5
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.2e-31 Score=272.51 Aligned_cols=266 Identities=18% Similarity=0.213 Sum_probs=207.5
Q ss_pred eCCeEEEEeccCCCCCCCCCCCCccccCCCCCCCcccceEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCCC
Q 048017 72 NNDKVIIFDRTDMGPSNLSLPIDKCRKEGDVGQLDCTAHSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNV 151 (566)
Q Consensus 72 ~~gkV~~~gg~~~~~s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~ 151 (566)
.+++||++||...+.. ....+++||+.+++|+.++.++..++..+++..+++||++||...
T Consensus 13 ~~~~i~~~GG~~~~~~-------------------~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~ 73 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQQS-------------------PIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDG 73 (301)
T ss_dssp CCEEEEEECCEETTTE-------------------ECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCS
T ss_pred CCCEEEEEeCccCCCc-------------------ceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCC
Confidence 5889999999431110 124589999999999999987777777777778999999999753
Q ss_pred --CCCeEEEEcCCCCCCCc---ccccCcccccccCcceEEEecCCcEEEEcCccC----CeEEEE-eCCCCCCCeeeec-
Q 048017 152 --GDRVIRLFTPCNDEGCD---WVELSKNLWDRRWYASNQILPDNRIIVVGGRRV----FTYEFY-PKIDSLSSSLYLR- 220 (566)
Q Consensus 152 --g~~~v~~ydP~~~~t~~---W~~~~~~M~~~R~y~s~~~L~dG~VyvvGG~~~----~s~E~y-P~~~~~~~w~~~p- 220 (566)
..+.+++||+. +++ |+++++ |+.+|.+++++++ +++|||+||... .++|+| |.++ .|...+
T Consensus 74 ~~~~~~~~~~d~~---~~~~~~W~~~~~-~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~---~W~~~~~ 145 (301)
T 2vpj_A 74 RSRLSSVECLDYT---ADEDGVWYSVAP-MNVRRGLAGATTL-GDMIYVSGGFDGSRRHTSMERYDPNID---QWSMLGD 145 (301)
T ss_dssp SCBCCCEEEEETT---CCTTCCCEEECC-CSSCCBSCEEEEE-TTEEEEECCBCSSCBCCEEEEEETTTT---EEEEEEE
T ss_pred CccCceEEEEECC---CCCCCeeEECCC-CCCCccceeEEEE-CCEEEEEcccCCCcccceEEEEcCCCC---eEEECCC
Confidence 25789999999 888 999988 9999999999988 899999999764 368889 7765 787543
Q ss_pred cccccCCCCCCCCccceEEEecCCcEEEEEcC-------eeEEEeccCCeEEEeecccCCCCCCccCCCCceeeeccccc
Q 048017 221 FLIETRDPGEENNLYPFLHLLPDGNLFIFANR-------RSILFDYINNKLVKEFPVIPGNDKRNYPSTGSSILLPVKLS 293 (566)
Q Consensus 221 ~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~-------~~e~yDp~t~~W~~~~p~lp~~~~r~~~~~g~avllpl~~~ 293 (566)
+... .+.++.+..+++||++||. ++++||+++++|+ .++++|. +|..+ +++++
T Consensus 146 ~p~~---------r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~-~~~~~p~--~r~~~--~~~~~------ 205 (301)
T 2vpj_A 146 MQTA---------REGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWT-NVTPMAT--KRSGA--GVALL------ 205 (301)
T ss_dssp CSSC---------CBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEE-EECCCSS--CCBSC--EEEEE------
T ss_pred CCCC---------cccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEE-eCCCCCc--ccccc--eEEEE------
Confidence 3222 2234455679999999983 5799999999999 5776765 46542 22322
Q ss_pred CCCCCCCCCCCCCCEEEEEcCCCCCccccccccccccccCCeeEEEEeeCCCCCeEEe-ccCCCcccceeEEccCCeEEE
Q 048017 294 AGSDGNGTAALPDAEVMVCGGAPAGAFIKSDKESVYVEASRTCGRLKVTDKYPVWSME-FMPMPRVMSDMLLLPSGDVII 372 (566)
Q Consensus 294 ~~~~~~~y~~~~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvLpdG~V~v 372 (566)
+++||++||.+... .++++++||+. +++|+.. +|+.+|..+.++++ +++||+
T Consensus 206 ------------~~~i~v~GG~~~~~------------~~~~v~~yd~~--~~~W~~~~~~p~~r~~~~~~~~-~~~i~v 258 (301)
T 2vpj_A 206 ------------NDHIYVVGGFDGTA------------HLSSVEAYNIR--TDSWTTVTSMTTPRCYVGATVL-RGRLYA 258 (301)
T ss_dssp ------------TTEEEEECCBCSSS------------BCCCEEEEETT--TTEEEEECCCSSCCBSCEEEEE-TTEEEE
T ss_pred ------------CCEEEEEeCCCCCc------------ccceEEEEeCC--CCcEEECCCCCCcccceeEEEE-CCEEEE
Confidence 78999999976321 25789999987 5899998 99999999998776 999999
Q ss_pred EcCCCCCCC-CCccccCc-CCcEEeccCCCCCCcceeEEEE
Q 048017 373 INGASNGTA-GWEDAEEP-DRRFVVLNPSKIPRMYHSSAVV 411 (566)
Q Consensus 373 vGG~~~g~~-~~~~~ydP-t~~Wt~~~~~~~~R~yhs~a~L 411 (566)
+||.+.... ...++||| +++|+.+++|+.+|..|+++++
T Consensus 259 ~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~ 299 (301)
T 2vpj_A 259 IAGYDGNSLLSSIECYDPIIDSWEVVTSMGTQRCDAGVCVL 299 (301)
T ss_dssp ECCBCSSSBEEEEEEEETTTTEEEEEEEEEEEEESCEEEEE
T ss_pred EcCcCCCcccccEEEEcCCCCeEEEcCCCCcccccceEEEe
Confidence 999762211 11257999 9999999999999999987765
No 6
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.98 E-value=3.4e-31 Score=272.00 Aligned_cols=252 Identities=17% Similarity=0.233 Sum_probs=193.9
Q ss_pred EEEEECCCCcEEeCcCC-CcccccCCeecCCCcEEEEcCCC---CC-----CCeEEEEcCCCCCCCcccccCcccccccC
Q 048017 111 SVLYDIASNTFRPLLLQ-TDTWCSSGAVLSDGTLVQTGGYN---VG-----DRVIRLFTPCNDEGCDWVELSKNLWDRRW 181 (566)
Q Consensus 111 ~~~yDp~t~~w~~l~~~-~~~~c~~~~~l~dG~l~vvGG~~---~g-----~~~v~~ydP~~~~t~~W~~~~~~M~~~R~ 181 (566)
+++|||.+++|...+.. ..+++..++++.+++||++||.. ++ .+.+++|||. +++|+++++ |+.+|.
T Consensus 26 ~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~---~~~W~~~~~-~p~~r~ 101 (318)
T 2woz_A 26 AVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNV---SSEWVGLPP-LPSARC 101 (318)
T ss_dssp EEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETT---TTEEEECSC-BSSCBC
T ss_pred eEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCC---CCcEEECCC-CCcccc
Confidence 57999999999985432 24566667778899999999953 11 1348999999 899999998 999999
Q ss_pred cceEEEecCCcEEEEcCccC------CeEEEE-eCCCCCCCeeeec-cccccCCCCCCCCccceEEEecCCcEEEEEcC-
Q 048017 182 YASNQILPDNRIIVVGGRRV------FTYEFY-PKIDSLSSSLYLR-FLIETRDPGEENNLYPFLHLLPDGNLFIFANR- 252 (566)
Q Consensus 182 y~s~~~L~dG~VyvvGG~~~------~s~E~y-P~~~~~~~w~~~p-~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~- 252 (566)
+++++++ +++|||+||... .++|+| |.++ .|...+ +... .+.++.+..+|+||++||.
T Consensus 102 ~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~---~W~~~~~~p~~---------r~~~~~~~~~~~iyv~GG~~ 168 (318)
T 2woz_A 102 LFGLGEV-DDKIYVVAGKDLQTEASLDSVLCYDPVAA---KWSEVKNLPIK---------VYGHNVISHNGMIYCLGGKT 168 (318)
T ss_dssp SCEEEEE-TTEEEEEEEEBTTTCCEEEEEEEEETTTT---EEEEECCCSSC---------EESCEEEEETTEEEEECCEE
T ss_pred ccceEEE-CCEEEEEcCccCCCCcccceEEEEeCCCC---CEeECCCCCCc---------ccccEEEEECCEEEEEcCCC
Confidence 9999888 899999999752 257888 7765 787543 3222 2334556689999999984
Q ss_pred -------eeEEEeccCCeEEEeecccCCCCCCccCCCCceeeecccccCCCCCCCCCCCCCCEEEEEcCCCCCccccccc
Q 048017 253 -------RSILFDYINNKLVKEFPVIPGNDKRNYPSTGSSILLPVKLSAGSDGNGTAALPDAEVMVCGGAPAGAFIKSDK 325 (566)
Q Consensus 253 -------~~e~yDp~t~~W~~~~p~lp~~~~r~~~~~g~avllpl~~~~~~~~~~y~~~~~gkI~v~GG~~~~~~~~~~~ 325 (566)
++++||+.+++|+ .++++|. +|..+ +++++ +++||++||.....
T Consensus 169 ~~~~~~~~~~~yd~~~~~W~-~~~~~p~--~r~~~--~~~~~------------------~~~iyv~GG~~~~~------ 219 (318)
T 2woz_A 169 DDKKCTNRVFIYNPKKGDWK-DLAPMKT--PRSMF--GVAIH------------------KGKIVIAGGVTEDG------ 219 (318)
T ss_dssp SSSCBCCCEEEEETTTTEEE-EECCCSS--CCBSC--EEEEE------------------TTEEEEEEEEETTE------
T ss_pred CCCCccceEEEEcCCCCEEE-ECCCCCC--Ccccc--eEEEE------------------CCEEEEEcCcCCCC------
Confidence 4799999999999 5886765 46542 33332 78999999975321
Q ss_pred cccccccCCeeEEEEeeCCCCCeEEe-ccCCCcccceeEEccCCeEEEEcCCCCCC----------CCCccccCc-CCcE
Q 048017 326 ESVYVEASRTCGRLKVTDKYPVWSME-FMPMPRVMSDMLLLPSGDVIIINGASNGT----------AGWEDAEEP-DRRF 393 (566)
Q Consensus 326 ~~~~~pa~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvLpdG~V~vvGG~~~g~----------~~~~~~ydP-t~~W 393 (566)
.++++++||+. +++|+.. +|+.+|..+.++++ +++||++||..... .....+||| +++|
T Consensus 220 ------~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W 290 (318)
T 2woz_A 220 ------LSASVEAFDLK--TNKWEVMTEFPQERSSISLVSL-AGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEW 290 (318)
T ss_dssp ------EEEEEEEEETT--TCCEEECCCCSSCCBSCEEEEE-TTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEE
T ss_pred ------ccceEEEEECC--CCeEEECCCCCCcccceEEEEE-CCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEe
Confidence 24678999987 5899998 99999999987766 99999999975210 011247999 9999
Q ss_pred EeccCCCCCCcceeEEEEcCCCcEEEec
Q 048017 394 VVLNPSKIPRMYHSSAVVLPDGRILVGG 421 (566)
Q Consensus 394 t~~~~~~~~R~yhs~a~LlpdG~V~v~G 421 (566)
+.+ ++.+|..|+++++ +++||+..
T Consensus 291 ~~~--~~~~r~~~~~~~~--~~~iyi~~ 314 (318)
T 2woz_A 291 AGM--LKEIRYASGASCL--ATRLNLFK 314 (318)
T ss_dssp EEE--ESCCGGGTTCEEE--EEEEEGGG
T ss_pred hhh--cccccccccceee--CCEEEEEE
Confidence 999 8899999998887 99999874
No 7
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.97 E-value=2.4e-31 Score=272.73 Aligned_cols=255 Identities=16% Similarity=0.152 Sum_probs=195.2
Q ss_pred EEEEECCCCcEEeCcCC-CcccccCCeecCCCcEEEEcCCC----C-C---CCeEEEEcCCCCCCCcccccCcccccccC
Q 048017 111 SVLYDIASNTFRPLLLQ-TDTWCSSGAVLSDGTLVQTGGYN----V-G---DRVIRLFTPCNDEGCDWVELSKNLWDRRW 181 (566)
Q Consensus 111 ~~~yDp~t~~w~~l~~~-~~~~c~~~~~l~dG~l~vvGG~~----~-g---~~~v~~ydP~~~~t~~W~~~~~~M~~~R~ 181 (566)
+.+|||.+++|+..+.. +..++..++++.+++||++||.. . . .+.+++|||. +++|+++++ |+.+|.
T Consensus 15 ~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~---~~~W~~~~~-~p~~r~ 90 (315)
T 4asc_A 15 AVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHL---DSEWLGMPP-LPSPRC 90 (315)
T ss_dssp EEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETT---TTEEEECCC-BSSCEE
T ss_pred eEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCC---CCeEEECCC-CCcchh
Confidence 68999999999873322 33566666777799999999952 1 1 2358899999 899999998 999999
Q ss_pred cceEEEecCCcEEEEcCcc----C---CeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEcC-
Q 048017 182 YASNQILPDNRIIVVGGRR----V---FTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANR- 252 (566)
Q Consensus 182 y~s~~~L~dG~VyvvGG~~----~---~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~- 252 (566)
+++++++ +++|||+||.+ . .++++| |.++ .|...+.+.. ..+.++.+..+++||++||.
T Consensus 91 ~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~---~W~~~~~~p~--------~r~~~~~~~~~~~iyv~GG~~ 158 (315)
T 4asc_A 91 LFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSF---KWGESDPLPY--------VVYGHTVLSHMDLVYVIGGKG 158 (315)
T ss_dssp SCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTT---EEEECCCCSS--------CCBSCEEEEETTEEEEECCBC
T ss_pred ceeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCC---cEeECCCCCC--------cccceeEEEECCEEEEEeCCC
Confidence 9999988 89999999964 1 368899 8765 7875433221 12335566789999999995
Q ss_pred -------eeEEEeccCCeEEEeecccCCCCCCccCCCCceeeecccccCCCCCCCCCCCCCCEEEEEcCCCCCccccccc
Q 048017 253 -------RSILFDYINNKLVKEFPVIPGNDKRNYPSTGSSILLPVKLSAGSDGNGTAALPDAEVMVCGGAPAGAFIKSDK 325 (566)
Q Consensus 253 -------~~e~yDp~t~~W~~~~p~lp~~~~r~~~~~g~avllpl~~~~~~~~~~y~~~~~gkI~v~GG~~~~~~~~~~~ 325 (566)
++++||+.+++|+ .++++|. +|..+ +++++ +++||++||.....
T Consensus 159 ~~~~~~~~~~~yd~~~~~W~-~~~~~p~--~r~~~--~~~~~------------------~~~iyv~GG~~~~~------ 209 (315)
T 4asc_A 159 SDRKCLNKMCVYDPKKFEWK-ELAPMQT--ARSLF--GATVH------------------DGRIIVAAGVTDTG------ 209 (315)
T ss_dssp TTSCBCCCEEEEETTTTEEE-ECCCCSS--CCBSC--EEEEE------------------TTEEEEEEEECSSS------
T ss_pred CCCcccceEEEEeCCCCeEE-ECCCCCC--chhce--EEEEE------------------CCEEEEEeccCCCC------
Confidence 5899999999999 5887765 46642 23332 78999999975321
Q ss_pred cccccccCCeeEEEEeeCCCCCeEEe-ccCCCcccceeEEccCCeEEEEcCCCC-----CC---CC--CccccCc-CCcE
Q 048017 326 ESVYVEASRTCGRLKVTDKYPVWSME-FMPMPRVMSDMLLLPSGDVIIINGASN-----GT---AG--WEDAEEP-DRRF 393 (566)
Q Consensus 326 ~~~~~pa~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvLpdG~V~vvGG~~~-----g~---~~--~~~~ydP-t~~W 393 (566)
.++++++||+. +++|+.. +|+.+|..+.++++ +++||++||.+. +. .. ..++||| +++|
T Consensus 210 ------~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W 280 (315)
T 4asc_A 210 ------LTSSAEVYSIT--DNKWAPFEAFPQERSSLSLVSL-VGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKW 280 (315)
T ss_dssp ------EEEEEEEEETT--TTEEEEECCCSSCCBSCEEEEE-TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEE
T ss_pred ------ccceEEEEECC--CCeEEECCCCCCcccceeEEEE-CCEEEEECCccccCcCCccccccccCcEEEecCCCChh
Confidence 25689999987 5899998 99999999998776 999999999742 10 00 1247999 9999
Q ss_pred EeccCCCCCCcceeEEEEcCCCcEEEecCC
Q 048017 394 VVLNPSKIPRMYHSSAVVLPDGRILVGGSN 423 (566)
Q Consensus 394 t~~~~~~~~R~yhs~a~LlpdG~V~v~GG~ 423 (566)
+.+ ++.+|..|+++++ ++++|+....
T Consensus 281 ~~~--~~~~r~~~~~~~~--~~~l~v~~~~ 306 (315)
T 4asc_A 281 EGV--LREIAYAAGATFL--PVRLNVLRLT 306 (315)
T ss_dssp EEE--ESCSSCCSSCEEE--EEEECGGGSE
T ss_pred hhh--ccCCcCccceEEe--CCEEEEEEeh
Confidence 999 7778999998887 9999988653
No 8
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.97 E-value=1e-29 Score=259.96 Aligned_cols=255 Identities=16% Similarity=0.155 Sum_probs=193.2
Q ss_pred ccccCCeecCCCcEEEEcCCC-CCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEecCCcEEEEcCcc----C---
Q 048017 130 TWCSSGAVLSDGTLVQTGGYN-VGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILPDNRIIVVGGRR----V--- 201 (566)
Q Consensus 130 ~~c~~~~~l~dG~l~vvGG~~-~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyvvGG~~----~--- 201 (566)
.++...++..+++||++||.. ...+.+++|||. +++|+++++ |+.+|.+++++++ +++||++||.. .
T Consensus 14 ~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~d~~---~~~W~~~~~-~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~ 88 (308)
T 1zgk_A 14 VPRGSHAPKVGRLIYTAGGYFRQSLSYLEAYNPS---NGTWLRLAD-LQVPRSGLAGCVV-GGLLYAVGGRNNSPDGNTD 88 (308)
T ss_dssp -------CCCCCCEEEECCBSSSBCCCEEEEETT---TTEEEECCC-CSSCCBSCEEEEE-TTEEEEECCEEEETTEEEE
T ss_pred eeCCccccCCCCEEEEEeCcCCCCcceEEEEcCC---CCeEeECCC-CCcccccceEEEE-CCEEEEECCCcCCCCCCee
Confidence 345556667799999999973 235789999999 899999987 9999999998888 89999999983 2
Q ss_pred -CeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEc-------CeeEEEeccCCeEEEeecccC
Q 048017 202 -FTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFAN-------RRSILFDYINNKLVKEFPVIP 272 (566)
Q Consensus 202 -~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg-------~~~e~yDp~t~~W~~~~p~lp 272 (566)
..+++| |.++ .|...+.+.. .+.+ +..+..+|+||++|| +++++||+.+++|. .++++|
T Consensus 89 ~~~~~~~d~~~~---~W~~~~~~p~-------~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-~~~~~p 156 (308)
T 1zgk_A 89 SSALDCYNPMTN---QWSPCAPMSV-------PRNR-IGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWH-LVAPML 156 (308)
T ss_dssp CCCEEEEETTTT---EEEECCCCSS-------CCBT-CEEEEETTEEEEECCEETTEECCCEEEEETTTTEEE-ECCCCS
T ss_pred cceEEEECCCCC---eEeECCCCCc-------Cccc-cEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEe-ECCCCC
Confidence 357888 7765 7875543321 1123 445566999999999 35899999999998 588776
Q ss_pred CCCCCccCCCCceeeecccccCCCCCCCCCCCCCCEEEEEcCCCCCccccccccccccccCCeeEEEEeeCCCCCeEEe-
Q 048017 273 GNDKRNYPSTGSSILLPVKLSAGSDGNGTAALPDAEVMVCGGAPAGAFIKSDKESVYVEASRTCGRLKVTDKYPVWSME- 351 (566)
Q Consensus 273 ~~~~r~~~~~g~avllpl~~~~~~~~~~y~~~~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~- 351 (566)
. +|..+ +++++ +++||++||..... .++++++||+. +++|+..
T Consensus 157 ~--~r~~~--~~~~~------------------~~~iyv~GG~~~~~------------~~~~~~~yd~~--~~~W~~~~ 200 (308)
T 1zgk_A 157 T--RRIGV--GVAVL------------------NRLLYAVGGFDGTN------------RLNSAECYYPE--RNEWRMIT 200 (308)
T ss_dssp S--CCBSC--EEEEE------------------TTEEEEECCBCSSC------------BCCCEEEEETT--TTEEEECC
T ss_pred c--cccce--EEEEE------------------CCEEEEEeCCCCCC------------cCceEEEEeCC--CCeEeeCC
Confidence 5 46542 22332 78999999976321 25789999987 5899998
Q ss_pred ccCCCcccceeEEccCCeEEEEcCCCCCCC-CCccccCc-CCcEEeccCCCCCCcceeEEEEcCCCcEEEecCCCCcccc
Q 048017 352 FMPMPRVMSDMLLLPSGDVIIINGASNGTA-GWEDAEEP-DRRFVVLNPSKIPRMYHSSAVVLPDGRILVGGSNPHRRYN 429 (566)
Q Consensus 352 ~M~~~R~~~~~vvLpdG~V~vvGG~~~g~~-~~~~~ydP-t~~Wt~~~~~~~~R~yhs~a~LlpdG~V~v~GG~~~~~~~ 429 (566)
+|+.+|..+.++++ +++||++||...... ...++||| +++|+.+++|+.+|..|+++++ +++||+.||.....
T Consensus 201 ~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~-- 275 (308)
T 1zgk_A 201 AMNTIRSGAGVCVL-HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVH--QGRIYVLGGYDGHT-- 275 (308)
T ss_dssp CCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSC--
T ss_pred CCCCccccceEEEE-CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEE--CCEEEEEcCcCCCc--
Confidence 99999999998776 999999999863211 12357999 9999999999999999988877 99999999964321
Q ss_pred cCCCCCCCcceEEEEecccc
Q 048017 430 FTAYPYPTDLSLEAFHPHYL 449 (566)
Q Consensus 430 ~~~~~~~~~~~vE~y~Ppyl 449 (566)
....+|+|+|..-
T Consensus 276 -------~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 276 -------FLDSVECYDPDTD 288 (308)
T ss_dssp -------BCCEEEEEETTTT
T ss_pred -------ccceEEEEcCCCC
Confidence 2347999999764
No 9
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.97 E-value=1.4e-29 Score=257.49 Aligned_cols=248 Identities=16% Similarity=0.186 Sum_probs=191.7
Q ss_pred CCCcEEEEcCCCC-CCCeEEEEcCCCCCCCcccccCcccccccCcceEEEecCCcEEEEcCccC----CeEEEE-eCCCC
Q 048017 139 SDGTLVQTGGYNV-GDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILPDNRIIVVGGRRV----FTYEFY-PKIDS 212 (566)
Q Consensus 139 ~dG~l~vvGG~~~-g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyvvGG~~~----~s~E~y-P~~~~ 212 (566)
.+++||++||... ..+++++||+. +++|+.+++ |+.+|.+++++++ +++|||+||.+. ..+++| |.++
T Consensus 14 ~~~~i~v~GG~~~~~~~~~~~~d~~---~~~W~~~~~-~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~- 87 (302)
T 2xn4_A 14 LPKLMVVVGGQAPKAIRSVECYDFK---EERWHQVAE-LPSRRCRAGMVYM-AGLVFAVGGFNGSLRVRTVDSYDPVKD- 87 (302)
T ss_dssp -CEEEEEECCBSSSBCCCEEEEETT---TTEEEEECC-CSSCCBSCEEEEE-TTEEEEESCBCSSSBCCCEEEEETTTT-
T ss_pred CCCEEEEECCCCCCCCCcEEEEcCc---CCcEeEccc-CCcccccceEEEE-CCEEEEEeCcCCCccccceEEECCCCC-
Confidence 4789999999753 45789999999 899999987 9999999998888 899999999764 367888 7765
Q ss_pred CCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEc-------CeeEEEeccCCeEEEeecccCCCCCCccCCCCce
Q 048017 213 LSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFAN-------RRSILFDYINNKLVKEFPVIPGNDKRNYPSTGSS 285 (566)
Q Consensus 213 ~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg-------~~~e~yDp~t~~W~~~~p~lp~~~~r~~~~~g~a 285 (566)
.|...+.+.. ..+.+..++.+++||++|| +++|+||+.+++|. .++++|. +|..+ +++
T Consensus 88 --~W~~~~~~p~--------~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~-~~~~~p~--~r~~~--~~~ 152 (302)
T 2xn4_A 88 --QWTSVANMRD--------RRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWF-HVAPMNT--RRSSV--GVG 152 (302)
T ss_dssp --EEEEECCCSS--------CCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEE-EECCCSS--CCBSC--EEE
T ss_pred --ceeeCCCCCc--------cccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEe-ecCCCCC--cccCc--eEE
Confidence 7876543322 1223455667999999999 35899999999998 5887765 46542 223
Q ss_pred eeecccccCCCCCCCCCCCCCCEEEEEcCCCCCccccccccccccccCCeeEEEEeeCCCCCeEEe-ccCCCcccceeEE
Q 048017 286 ILLPVKLSAGSDGNGTAALPDAEVMVCGGAPAGAFIKSDKESVYVEASRTCGRLKVTDKYPVWSME-FMPMPRVMSDMLL 364 (566)
Q Consensus 286 vllpl~~~~~~~~~~y~~~~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vv 364 (566)
++ +++||++||.+.... ..++++++||+. +++|+.. +|+.+|..+.+++
T Consensus 153 ~~------------------~~~iyv~GG~~~~~~----------~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~ 202 (302)
T 2xn4_A 153 VV------------------GGLLYAVGGYDVASR----------QCLSTVECYNAT--TNEWTYIAEMSTRRSGAGVGV 202 (302)
T ss_dssp EE------------------TTEEEEECCEETTTT----------EECCCEEEEETT--TTEEEEECCCSSCCBSCEEEE
T ss_pred EE------------------CCEEEEEeCCCCCCC----------ccccEEEEEeCC--CCcEEECCCCccccccccEEE
Confidence 32 789999999753210 135789999987 5899998 9999999999877
Q ss_pred ccCCeEEEEcCCCCCCC-CCccccCc-CCcEEeccCCCCCCcceeEEEEcCCCcEEEecCCCCcccccCCCCCCCcceEE
Q 048017 365 LPSGDVIIINGASNGTA-GWEDAEEP-DRRFVVLNPSKIPRMYHSSAVVLPDGRILVGGSNPHRRYNFTAYPYPTDLSLE 442 (566)
Q Consensus 365 LpdG~V~vvGG~~~g~~-~~~~~ydP-t~~Wt~~~~~~~~R~yhs~a~LlpdG~V~v~GG~~~~~~~~~~~~~~~~~~vE 442 (566)
+ +++||++||.+.... ...++||| +++|+.+++|+.+|..|+++++ +++||+.||..... ...++|
T Consensus 203 ~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~i~v~GG~~~~~---------~~~~v~ 270 (302)
T 2xn4_A 203 L-NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAV--NGLLYVVGGDDGSC---------NLASVE 270 (302)
T ss_dssp E-TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSS---------BCCCEE
T ss_pred E-CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEE--CCEEEEECCcCCCc---------ccccEE
Confidence 6 999999999863211 12358999 9999999999999999988776 99999999964321 134799
Q ss_pred EEecccc
Q 048017 443 AFHPHYL 449 (566)
Q Consensus 443 ~y~Ppyl 449 (566)
+|+|..-
T Consensus 271 ~yd~~~~ 277 (302)
T 2xn4_A 271 YYNPTTD 277 (302)
T ss_dssp EEETTTT
T ss_pred EEcCCCC
Confidence 9999864
No 10
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.97 E-value=3.2e-29 Score=255.43 Aligned_cols=248 Identities=13% Similarity=0.141 Sum_probs=192.2
Q ss_pred CCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEecCCcEEEEcCccC---CeEEEE-eCCCCCCC
Q 048017 140 DGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILPDNRIIVVGGRRV---FTYEFY-PKIDSLSS 215 (566)
Q Consensus 140 dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyvvGG~~~---~s~E~y-P~~~~~~~ 215 (566)
.+.||++||... .+++++|||. +++|+.+++ |+.+|.+++++++ +++|||+||.+. ..+++| |.++ .
T Consensus 11 ~~~l~~~GG~~~-~~~~~~~d~~---~~~W~~~~~-~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~d~~~~---~ 81 (306)
T 3ii7_A 11 HDYRIALFGGSQ-PQSCRYFNPK---DYSWTDIRC-PFEKRRDAACVFW-DNVVYILGGSQLFPIKRMDCYNVVKD---S 81 (306)
T ss_dssp CCEEEEEECCSS-TTSEEEEETT---TTEEEECCC-CSCCCBSCEEEEE-TTEEEEECCBSSSBCCEEEEEETTTT---E
T ss_pred cceEEEEeCCCC-CceEEEecCC---CCCEecCCC-CCcccceeEEEEE-CCEEEEEeCCCCCCcceEEEEeCCCC---e
Confidence 478999999764 7889999999 899999998 9999999999988 899999999762 467888 8765 7
Q ss_pred eeeeccccccCCCCCCCCccceEEEecCCcEEEEEcC--------eeEEEeccCCeEEEeecccCCCCCCccCCCCceee
Q 048017 216 SLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANR--------RSILFDYINNKLVKEFPVIPGNDKRNYPSTGSSIL 287 (566)
Q Consensus 216 w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~--------~~e~yDp~t~~W~~~~p~lp~~~~r~~~~~g~avl 287 (566)
|...+.+.. ..+.++.++.+++||++||. ++++||+.+++|. .++++|. +|..+ +++++
T Consensus 82 W~~~~~~p~--------~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~-~~~~~p~--~r~~~--~~~~~ 148 (306)
T 3ii7_A 82 WYSKLGPPT--------PRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWH-TKPSMLT--QRCSH--GMVEA 148 (306)
T ss_dssp EEEEECCSS--------CCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEE-EECCCSS--CCBSC--EEEEE
T ss_pred EEECCCCCc--------cccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceE-eCCCCcC--Cccee--EEEEE
Confidence 875443321 12334555679999999994 3799999999998 5887775 46542 22332
Q ss_pred ecccccCCCCCCCCCCCCCCEEEEEcCCCCCccccccccccccccCCeeEEEEeeCCCCCeEEe-ccCCCcccceeEEcc
Q 048017 288 LPVKLSAGSDGNGTAALPDAEVMVCGGAPAGAFIKSDKESVYVEASRTCGRLKVTDKYPVWSME-FMPMPRVMSDMLLLP 366 (566)
Q Consensus 288 lpl~~~~~~~~~~y~~~~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvLp 366 (566)
+++||++||....... ...++++++||+. +++|+.. +|+.+|..+.++++
T Consensus 149 ------------------~~~iyv~GG~~~~~~~--------~~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~~- 199 (306)
T 3ii7_A 149 ------------------NGLIYVCGGSLGNNVS--------GRVLNSCEVYDPA--TETWTELCPMIEARKNHGLVFV- 199 (306)
T ss_dssp ------------------TTEEEEECCEESCTTT--------CEECCCEEEEETT--TTEEEEECCCSSCCBSCEEEEE-
T ss_pred ------------------CCEEEEECCCCCCCCc--------ccccceEEEeCCC--CCeEEECCCccchhhcceEEEE-
Confidence 7899999997532110 0126789999987 5899998 99999999998777
Q ss_pred CCeEEEEcCCCCCCC-CCccccCc-CCcEEeccCCCCCCcceeEEEEcCCCcEEEecCCCCcccccCCCCCCCcceEEEE
Q 048017 367 SGDVIIINGASNGTA-GWEDAEEP-DRRFVVLNPSKIPRMYHSSAVVLPDGRILVGGSNPHRRYNFTAYPYPTDLSLEAF 444 (566)
Q Consensus 367 dG~V~vvGG~~~g~~-~~~~~ydP-t~~Wt~~~~~~~~R~yhs~a~LlpdG~V~v~GG~~~~~~~~~~~~~~~~~~vE~y 444 (566)
+++||++||.+.... ...++||| +++|+.+++|+.+|..|+++++ +++||+.||..... ....+++|
T Consensus 200 ~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~---------~~~~~~~y 268 (306)
T 3ii7_A 200 KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVG---------RLGHILEY 268 (306)
T ss_dssp TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSS---------BCCEEEEE
T ss_pred CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCe---------eeeeEEEE
Confidence 999999999763211 12358999 9999999999999999998887 99999999964332 23479999
Q ss_pred ecccc
Q 048017 445 HPHYL 449 (566)
Q Consensus 445 ~Ppyl 449 (566)
+|..-
T Consensus 269 d~~~~ 273 (306)
T 3ii7_A 269 NTETD 273 (306)
T ss_dssp ETTTT
T ss_pred cCCCC
Confidence 99764
No 11
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.97 E-value=1.1e-29 Score=264.53 Aligned_cols=283 Identities=14% Similarity=0.058 Sum_probs=192.7
Q ss_pred ccCCCccceeEEEEeeCCeEEEEeccCCCCCCCCCCCCccccCCCCCCCcccceEEEEECC--CCcEEeCcCCC-ccccc
Q 048017 57 LQSSIGISAMHMQVLNNDKVIIFDRTDMGPSNLSLPIDKCRKEGDVGQLDCTAHSVLYDIA--SNTFRPLLLQT-DTWCS 133 (566)
Q Consensus 57 l~~~~~~~a~h~~~l~~gkV~~~gg~~~~~s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp~--t~~w~~l~~~~-~~~c~ 133 (566)
+++++..+..|++++.+++||++||... ..+.+||+. +++|+.++.++ ..++.
T Consensus 3 l~~lP~~r~~~~~~~~~~~iyv~GG~~~------------------------~~~~~~d~~~~~~~W~~~~~~p~~~R~~ 58 (357)
T 2uvk_A 3 LPETPVPFKSGTGAIDNDTVYIGLGSAG------------------------TAWYKLDTQAKDKKWTALAAFPGGPRDQ 58 (357)
T ss_dssp SCCCSSCCCSCEEEEETTEEEEECGGGT------------------------TCEEEEETTSSSCCEEECCCCTTCCCBS
T ss_pred CCCCCccccceEEEEECCEEEEEeCcCC------------------------CeEEEEccccCCCCeeECCCCCCCcCcc
Confidence 4444555667888878999999999751 137899998 49999999887 67777
Q ss_pred CCeecCCCcEEEEcCC-C--C----CCCeEEEEcCCCCCCCcccccCcccc-cccCcceEEEecCCcEEEEcCccCCe--
Q 048017 134 SGAVLSDGTLVQTGGY-N--V----GDRVIRLFTPCNDEGCDWVELSKNLW-DRRWYASNQILPDNRIIVVGGRRVFT-- 203 (566)
Q Consensus 134 ~~~~l~dG~l~vvGG~-~--~----g~~~v~~ydP~~~~t~~W~~~~~~M~-~~R~y~s~~~L~dG~VyvvGG~~~~s-- 203 (566)
.++++.+++||++||. . + ..+.+++|||. +++|+++++ |. .+|..++++++ +++|||+||.+...
T Consensus 59 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~---~~~W~~~~~-~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~ 133 (357)
T 2uvk_A 59 ATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPK---TNSWVKLMS-HAPMGMAGHVTFVH-NGKAYVTGGVNQNIFN 133 (357)
T ss_dssp CEEEEETTEEEEECCEEECTTSCEEECCCEEEEETT---TTEEEECSC-CCSSCCSSEEEEEE-TTEEEEEECCCHHHHH
T ss_pred ceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCC---CCcEEECCC-CCCcccccceEEEE-CCEEEEEeCcCCCcCc
Confidence 7777779999999998 2 1 25789999999 899999998 88 99999988886 89999999975311
Q ss_pred -----EEEE-eCCCCCCCeeee--ccccccCCCCCCCCccceEEEecCCcEEEEEcCeeEEEeccCCeEEEeecccCCCC
Q 048017 204 -----YEFY-PKIDSLSSSLYL--RFLIETRDPGEENNLYPFLHLLPDGNLFIFANRRSILFDYINNKLVKEFPVIPGND 275 (566)
Q Consensus 204 -----~E~y-P~~~~~~~w~~~--p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~~~e~yDp~t~~W~~~~p~lp~~~ 275 (566)
.+.+ |..+ .|... .++... ...|-. -+++++||+.+++|+ .++++|..
T Consensus 134 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~------~~~~~~-------------~~~v~~yd~~~~~W~-~~~~~p~~- 189 (357)
T 2uvk_A 134 GYFEDLNEAGKDST---AIDKINAHYFDKK------AEDYFF-------------NKFLLSFDPSTQQWS-YAGESPWY- 189 (357)
T ss_dssp HHHHHHHHHTTCHH---HHHHHHHHHHSSC------GGGGCC-------------CCEEEEEETTTTEEE-EEEECSSC-
T ss_pred ccccchhhcCCccc---chhhhhhhhcccc------ccccCC-------------cccEEEEeCCCCcEE-ECCCCCCC-
Confidence 0011 1100 11100 000000 000000 035789999999999 57777653
Q ss_pred CCccCCCCceeeecccccCCCCCCCCCCCCCCEEEEEcCCCCCccccccccccccccCCeeEEEEeeCCCCCeEEe-ccC
Q 048017 276 KRNYPSTGSSILLPVKLSAGSDGNGTAALPDAEVMVCGGAPAGAFIKSDKESVYVEASRTCGRLKVTDKYPVWSME-FMP 354 (566)
Q Consensus 276 ~r~~~~~g~avllpl~~~~~~~~~~y~~~~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~-~M~ 354 (566)
|... ++++++ +++||++||..... ..++.+++||+...+++|+.. +|+
T Consensus 190 -~~~~-~~~~~~------------------~~~iyv~GG~~~~~-----------~~~~~v~~~d~d~~~~~W~~~~~~~ 238 (357)
T 2uvk_A 190 -GTAG-AAVVNK------------------GDKTWLINGEAKPG-----------LRTDAVFELDFTGNNLKWNKLAPVS 238 (357)
T ss_dssp -CCBS-CEEEEE------------------TTEEEEECCEEETT-----------EECCCEEEEECC---CEEEECCCSS
T ss_pred -Cccc-ccEEEE------------------CCEEEEEeeecCCC-----------cccCceEEEEecCCCCcEEecCCCC
Confidence 3331 122322 89999999974211 124667888873336899997 887
Q ss_pred CCcc--cceeEEccCCeEEEEcCCCCC----------------CCC--CccccCc-CCcEEeccCCCCCCcceeEEEEcC
Q 048017 355 MPRV--MSDMLLLPSGDVIIINGASNG----------------TAG--WEDAEEP-DRRFVVLNPSKIPRMYHSSAVVLP 413 (566)
Q Consensus 355 ~~R~--~~~~vvLpdG~V~vvGG~~~g----------------~~~--~~~~ydP-t~~Wt~~~~~~~~R~yhs~a~Llp 413 (566)
.+|. .+.+++ .+++|||+||.... ... ..++||| +++|+.+++|+.+|.+|+++++
T Consensus 239 ~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-- 315 (357)
T 2uvk_A 239 SPDGVAGGFAGI-SNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPW-- 315 (357)
T ss_dssp TTTCCBSCEEEE-ETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEEE--
T ss_pred CCcccccceEEE-ECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEEe--
Confidence 7754 555555 49999999996421 000 1357999 9999999999999999988776
Q ss_pred CCcEEEecCCCCc
Q 048017 414 DGRILVGGSNPHR 426 (566)
Q Consensus 414 dG~V~v~GG~~~~ 426 (566)
+++|||.||....
T Consensus 316 ~~~i~v~GG~~~~ 328 (357)
T 2uvk_A 316 NNSLLIIGGETAG 328 (357)
T ss_dssp TTEEEEEEEECGG
T ss_pred CCEEEEEeeeCCC
Confidence 9999999996543
No 12
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.97 E-value=2e-28 Score=248.75 Aligned_cols=249 Identities=15% Similarity=0.166 Sum_probs=190.6
Q ss_pred CCCcEEEEcC-CCC--CCCeEEEEcCCCCCCCcccccCcccccccCcceEEEecCCcEEEEcCccC----CeEEEE-eCC
Q 048017 139 SDGTLVQTGG-YNV--GDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILPDNRIIVVGGRRV----FTYEFY-PKI 210 (566)
Q Consensus 139 ~dG~l~vvGG-~~~--g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyvvGG~~~----~s~E~y-P~~ 210 (566)
.+++||++|| ... ..+.+++|||. +++|+.+++ |+.+|.+++++.+ +++||++||..+ ..+++| +.+
T Consensus 13 ~~~~i~~~GG~~~~~~~~~~~~~~d~~---~~~W~~~~~-~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~~ 87 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQQSPIDVVEKYDPK---TQEWSFLPS-ITRKRRYVASVSL-HDRIYVIGGYDGRSRLSSVECLDYTA 87 (301)
T ss_dssp CCEEEEEECCEETTTEECCCEEEEETT---TTEEEECCC-CSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTC
T ss_pred CCCEEEEEeCccCCCcceeEEEEEcCC---CCeEEeCCC-CChhhccccEEEE-CCEEEEEcCCCCCccCceEEEEECCC
Confidence 4789999999 432 25789999999 899999997 9999999998888 899999999763 357888 776
Q ss_pred CCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEcC-------eeEEEeccCCeEEEeecccCCCCCCccCCCC
Q 048017 211 DSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANR-------RSILFDYINNKLVKEFPVIPGNDKRNYPSTG 283 (566)
Q Consensus 211 ~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~-------~~e~yDp~t~~W~~~~p~lp~~~~r~~~~~g 283 (566)
+....|...+.+.. ..+.++.+..+++||++||. ++++||+.+++|. .++++|. +|..+ +
T Consensus 88 ~~~~~W~~~~~~p~--------~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~-~~~~~p~--~r~~~--~ 154 (301)
T 2vpj_A 88 DEDGVWYSVAPMNV--------RRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWS-MLGDMQT--AREGA--G 154 (301)
T ss_dssp CTTCCCEEECCCSS--------CCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEE-EEEECSS--CCBSC--E
T ss_pred CCCCeeEECCCCCC--------CccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEE-ECCCCCC--Ccccc--e
Confidence 51112875543321 12234455669999999983 5899999999999 5787775 46542 2
Q ss_pred ceeeecccccCCCCCCCCCCCCCCEEEEEcCCCCCccccccccccccccCCeeEEEEeeCCCCCeEEe-ccCCCccccee
Q 048017 284 SSILLPVKLSAGSDGNGTAALPDAEVMVCGGAPAGAFIKSDKESVYVEASRTCGRLKVTDKYPVWSME-FMPMPRVMSDM 362 (566)
Q Consensus 284 ~avllpl~~~~~~~~~~y~~~~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~ 362 (566)
++++ +++||++||.+... .++++++||+. +++|+.. +|+.+|..+.+
T Consensus 155 ~~~~------------------~~~iyv~GG~~~~~------------~~~~~~~~d~~--~~~W~~~~~~p~~r~~~~~ 202 (301)
T 2vpj_A 155 LVVA------------------SGVIYCLGGYDGLN------------ILNSVEKYDPH--TGHWTNVTPMATKRSGAGV 202 (301)
T ss_dssp EEEE------------------TTEEEEECCBCSSC------------BCCCEEEEETT--TTEEEEECCCSSCCBSCEE
T ss_pred EEEE------------------CCEEEEECCCCCCc------------ccceEEEEeCC--CCcEEeCCCCCcccccceE
Confidence 2322 78999999975321 35789999987 5899998 99999999998
Q ss_pred EEccCCeEEEEcCCCCCC-CCCccccCc-CCcEEeccCCCCCCcceeEEEEcCCCcEEEecCCCCcccccCCCCCCCcce
Q 048017 363 LLLPSGDVIIINGASNGT-AGWEDAEEP-DRRFVVLNPSKIPRMYHSSAVVLPDGRILVGGSNPHRRYNFTAYPYPTDLS 440 (566)
Q Consensus 363 vvLpdG~V~vvGG~~~g~-~~~~~~ydP-t~~Wt~~~~~~~~R~yhs~a~LlpdG~V~v~GG~~~~~~~~~~~~~~~~~~ 440 (566)
+++ +++||++||.+... ....++||| +++|+.+++|+.+|..|+++++ +++||+.||..... ....
T Consensus 203 ~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~---------~~~~ 270 (301)
T 2vpj_A 203 ALL-NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNS---------LLSS 270 (301)
T ss_dssp EEE-TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSS---------BEEE
T ss_pred EEE-CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCEEEEEcCcCCCc---------cccc
Confidence 776 99999999986321 112357999 9999999999999999988777 99999999954321 2357
Q ss_pred EEEEecccc
Q 048017 441 LEAFHPHYL 449 (566)
Q Consensus 441 vE~y~Ppyl 449 (566)
+|+|+|..-
T Consensus 271 v~~yd~~~~ 279 (301)
T 2vpj_A 271 IECYDPIID 279 (301)
T ss_dssp EEEEETTTT
T ss_pred EEEEcCCCC
Confidence 999999753
No 13
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.95 E-value=1.4e-27 Score=244.73 Aligned_cols=267 Identities=13% Similarity=0.080 Sum_probs=193.9
Q ss_pred CCCCceEEccCCC--ccceeEEEEeeCCeEEEEeccCCCCCCCCCCCCccccCCCCCCCcccceEEEEECCCCcEEeCcC
Q 048017 49 KSGGQWVLLQSSI--GISAMHMQVLNNDKVIIFDRTDMGPSNLSLPIDKCRKEGDVGQLDCTAHSVLYDIASNTFRPLLL 126 (566)
Q Consensus 49 ~~~g~W~~l~~~~--~~~a~h~~~l~~gkV~~~gg~~~~~s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~ 126 (566)
+..++|+. ++++ ..+..|++++.+++||++||...... +. .. .....+++||+.+++|+.++.
T Consensus 20 ~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~------~~------~~--~~~~~~~~~d~~~~~W~~~~~ 84 (315)
T 4asc_A 20 PAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNED------NK------ED--PMSAYFLQFDHLDSEWLGMPP 84 (315)
T ss_dssp TTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSS------CS------SS--CEEEEEEEEETTTTEEEECCC
T ss_pred CCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCC------CC------cc--ccccceEEecCCCCeEEECCC
Confidence 34578986 4432 35778888889999999999731110 00 00 012458899999999999998
Q ss_pred CCcccccCCeecCCCcEEEEcCCC-----CCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEecCCcEEEEcCcc-
Q 048017 127 QTDTWCSSGAVLSDGTLVQTGGYN-----VGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILPDNRIIVVGGRR- 200 (566)
Q Consensus 127 ~~~~~c~~~~~l~dG~l~vvGG~~-----~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyvvGG~~- 200 (566)
++..++..+++..+++||++||.. ...+.+++|||. +++|+++++ |+.+|..++++++ +++|||+||..
T Consensus 85 ~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~---~~~W~~~~~-~p~~r~~~~~~~~-~~~iyv~GG~~~ 159 (315)
T 4asc_A 85 LPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRL---SFKWGESDP-LPYVVYGHTVLSH-MDLVYVIGGKGS 159 (315)
T ss_dssp BSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETT---TTEEEECCC-CSSCCBSCEEEEE-TTEEEEECCBCT
T ss_pred CCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCC---CCcEeECCC-CCCcccceeEEEE-CCEEEEEeCCCC
Confidence 887777777777899999999963 235789999999 899999998 9999999998887 89999999983
Q ss_pred C----CeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEcC-------eeEEEeccCCeEEEee
Q 048017 201 V----FTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANR-------RSILFDYINNKLVKEF 268 (566)
Q Consensus 201 ~----~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~-------~~e~yDp~t~~W~~~~ 268 (566)
. ..+|+| |.++ .|...+.+.. ..+.+..+..+++||++||. +.++||+++++|+ .+
T Consensus 160 ~~~~~~~~~~yd~~~~---~W~~~~~~p~--------~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-~~ 227 (315)
T 4asc_A 160 DRKCLNKMCVYDPKKF---EWKELAPMQT--------ARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWA-PF 227 (315)
T ss_dssp TSCBCCCEEEEETTTT---EEEECCCCSS--------CCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEE-EE
T ss_pred CCcccceEEEEeCCCC---eEEECCCCCC--------chhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEE-EC
Confidence 2 368899 8765 7875443221 12234455679999999994 5799999999999 57
Q ss_pred cccCCCCCCccCCCCceeeecccccCCCCCCCCCCCCCCEEEEEcCCCCCccccccccccccccCCeeEEEEeeCCCCCe
Q 048017 269 PVIPGNDKRNYPSTGSSILLPVKLSAGSDGNGTAALPDAEVMVCGGAPAGAFIKSDKESVYVEASRTCGRLKVTDKYPVW 348 (566)
Q Consensus 269 p~lp~~~~r~~~~~g~avllpl~~~~~~~~~~y~~~~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W 348 (566)
+++|. +|..+ +++++ +++||++||.+........ .....++++++||+. +++|
T Consensus 228 ~~~p~--~r~~~--~~~~~------------------~~~l~v~GG~~~~~~~~~~---~~~~~~~~v~~yd~~--~~~W 280 (315)
T 4asc_A 228 EAFPQ--ERSSL--SLVSL------------------VGTLYAIGGFATLETESGE---LVPTELNDIWRYNEE--EKKW 280 (315)
T ss_dssp CCCSS--CCBSC--EEEEE------------------TTEEEEEEEEEEEECTTSC---EEEEEEEEEEEEETT--TTEE
T ss_pred CCCCC--cccce--eEEEE------------------CCEEEEECCccccCcCCcc---ccccccCcEEEecCC--CChh
Confidence 86665 46542 23332 7899999997421000000 000135678999987 4899
Q ss_pred EEeccCCCcccceeEEccCCeEEEEcCC
Q 048017 349 SMEFMPMPRVMSDMLLLPSGDVIIINGA 376 (566)
Q Consensus 349 ~~~~M~~~R~~~~~vvLpdG~V~vvGG~ 376 (566)
+.. ++.+|..++++++ +++||++...
T Consensus 281 ~~~-~~~~r~~~~~~~~-~~~l~v~~~~ 306 (315)
T 4asc_A 281 EGV-LREIAYAAGATFL-PVRLNVLRLT 306 (315)
T ss_dssp EEE-ESCSSCCSSCEEE-EEEECGGGSE
T ss_pred hhh-ccCCcCccceEEe-CCEEEEEEeh
Confidence 988 7788998898776 9999998754
No 14
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.95 E-value=1.9e-27 Score=268.50 Aligned_cols=287 Identities=14% Similarity=0.167 Sum_probs=199.6
Q ss_pred EEEEECCCCcEEeCcCCCcccccCCeecC-CCcEEEEcCCCC--------CCCeEEEEcCCCCCCCcccccCcccccccC
Q 048017 111 SVLYDIASNTFRPLLLQTDTWCSSGAVLS-DGTLVQTGGYNV--------GDRVIRLFTPCNDEGCDWVELSKNLWDRRW 181 (566)
Q Consensus 111 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~-dG~l~vvGG~~~--------g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~ 181 (566)
.+.|||.+++|+.+..++. ..++.++++ +|+||++||... +...+++|||. +++|+.++. |+.+|.
T Consensus 168 ~~~~dp~~~~W~~~~~~P~-~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~---t~~w~~~~~-~~~~~~ 242 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDLPI-VPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPS---TGIVSDRTV-TVTKHD 242 (656)
T ss_dssp CCCCCTTSCEEEEEEECSS-CCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTT---TCCBCCCEE-EECSCC
T ss_pred cccCCCCCCeeeeeccCCC-CceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCC---CCcEEeCcc-cCCCCC
Confidence 5678999999998877654 233445555 999999999742 12478999999 999999987 887775
Q ss_pred cc--eEEEecCCcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEc-------
Q 048017 182 YA--SNQILPDNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFAN------- 251 (566)
Q Consensus 182 y~--s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg------- 251 (566)
.+ +++++.||+||++||....++++| |.++ .|...+.+.. .++|+.+.+++||+||++||
T Consensus 243 ~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~---~W~~~~~~~~-------~R~~~s~~~~~dg~iyv~GG~~~~~~~ 312 (656)
T 1k3i_A 243 MFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSD---SWIPGPDMQV-------ARGYQSSATMSDGRVFTIGGSWSGGVF 312 (656)
T ss_dssp CSSCEEEECTTSCEEEECSSSTTCEEEEEGGGT---EEEECCCCSS-------CCSSCEEEECTTSCEEEECCCCCSSSC
T ss_pred CccccccCCCCCCEEEeCCCCCCceEEecCcCC---ceeECCCCCc-------cccccceEEecCCeEEEEeCcccCCcc
Confidence 44 466777999999999877789999 8875 7876543322 24677777777999999999
Q ss_pred -CeeEEEeccCCeEEEeeccc---CCCCCCccCCCCceeeecccccCCCCCCCCCCCCCCEEEEEcCCCCCccccccccc
Q 048017 252 -RRSILFDYINNKLVKEFPVI---PGNDKRNYPSTGSSILLPVKLSAGSDGNGTAALPDAEVMVCGGAPAGAFIKSDKES 327 (566)
Q Consensus 252 -~~~e~yDp~t~~W~~~~p~l---p~~~~r~~~~~g~avllpl~~~~~~~~~~y~~~~~gkI~v~GG~~~~~~~~~~~~~ 327 (566)
.++|+||+++++|+ .++.+ |+...|. .+..+. ++++|++||.++..+.
T Consensus 313 ~~~~e~yd~~t~~W~-~~~~~~~~p~~~~~~---~~~~~~------------------~~~iyv~Gg~~g~~~~------ 364 (656)
T 1k3i_A 313 EKNGEVYSPSSKTWT-SLPNAKVNPMLTADK---QGLYRS------------------DNHAWLFGWKKGSVFQ------ 364 (656)
T ss_dssp CCCEEEEETTTTEEE-EETTSCSGGGCCCCT---TGGGTT------------------TCSCCEEECGGGCEEE------
T ss_pred cccceEeCCCCCcce-eCCCccccccccccc---cceeec------------------CCceEEEECCCCcEEE------
Confidence 35899999999998 45321 2221222 111111 7899999997532211
Q ss_pred cccccCCeeEEEEeeCCCCCeEEe--ccCC------CcccceeEEc--cCCeEEEEcCCCC--CCCC-----CccccCc-
Q 048017 328 VYVEASRTCGRLKVTDKYPVWSME--FMPM------PRVMSDMLLL--PSGDVIIINGASN--GTAG-----WEDAEEP- 389 (566)
Q Consensus 328 ~~~pa~~s~~~~d~~~~~~~W~~~--~M~~------~R~~~~~vvL--pdG~V~vvGG~~~--g~~~-----~~~~ydP- 389 (566)
...++++++||+. .+.|... .++. +|..+.++++ .+|+||++||... +... ..++|||
T Consensus 365 --~~~~~~v~~yd~~--~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~ 440 (656)
T 1k3i_A 365 --AGPSTAMNWYYTS--GSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPG 440 (656)
T ss_dssp --CCSSSEEEEEECS--TTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTT
T ss_pred --ecCccceeeeecC--CcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCC
Confidence 1135689999987 4777653 3333 3445665553 4899999999642 1111 1247999
Q ss_pred CCcEEecc--CCCCCCcceeEEEEcCCCcEEEecCCCCcccccCCCCCCCcceEEEEeccc
Q 048017 390 DRRFVVLN--PSKIPRMYHSSAVVLPDGRILVGGSNPHRRYNFTAYPYPTDLSLEAFHPHY 448 (566)
Q Consensus 390 t~~Wt~~~--~~~~~R~yhs~a~LlpdG~V~v~GG~~~~~~~~~~~~~~~~~~vE~y~Ppy 448 (566)
+++|+.+. +|+.+|..|+ +++++||+|||.||...+. .+.. ......+|+|+|..
T Consensus 441 ~~~W~~~~~~~mp~~R~~~~-~~~l~~g~i~v~GG~~~~~-~~~~--~~~~~~v~~ydp~t 497 (656)
T 1k3i_A 441 TSPNTVFASNGLYFARTFHT-SVVLPDGSTFITGGQRRGI-PFED--STPVFTPEIYVPEQ 497 (656)
T ss_dssp SCCEEEECTTCCSSCCBSCE-EEECTTSCEEEECCBSBCC-TTCC--CSBCCCCEEEEGGG
T ss_pred CCCeeEEccCCCCCCcccCC-eEECCCCCEEEECCcccCc-CcCC--CCcccceEEEcCCC
Confidence 99999986 9999999996 5567999999999964321 0000 01245799999976
No 15
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.95 E-value=1e-26 Score=238.50 Aligned_cols=265 Identities=14% Similarity=0.105 Sum_probs=191.6
Q ss_pred CCCCceEEccCC-CccceeEEEEeeCCeEEEEeccCCCCCCCCCCCCccccCCCCCCCcccceEEEEECCCCcEEeCcCC
Q 048017 49 KSGGQWVLLQSS-IGISAMHMQVLNNDKVIIFDRTDMGPSNLSLPIDKCRKEGDVGQLDCTAHSVLYDIASNTFRPLLLQ 127 (566)
Q Consensus 49 ~~~g~W~~l~~~-~~~~a~h~~~l~~gkV~~~gg~~~~~s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~ 127 (566)
+..++|...... ...+..|++++.+++||++||...+.. +.. . .....+++||+.+++|+.++.+
T Consensus 31 ~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~------~~~------~--~~~~~~~~~d~~~~~W~~~~~~ 96 (318)
T 2woz_A 31 PMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEE------NKD------Q--PLQSYFFQLDNVSSEWVGLPPL 96 (318)
T ss_dssp TTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC---------------------CCCBEEEEEETTTTEEEECSCB
T ss_pred CCCCceecccCCccCCccceEEEEECCEEEEECCcccCcc------ccC------C--CccccEEEEeCCCCcEEECCCC
Confidence 345789984321 234667888889999999999632110 000 0 0123478999999999999988
Q ss_pred CcccccCCeecCCCcEEEEcCCCC----CCCeEEEEcCCCCCCCcccccCcccccccCcceEEEecCCcEEEEcCccC--
Q 048017 128 TDTWCSSGAVLSDGTLVQTGGYNV----GDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILPDNRIIVVGGRRV-- 201 (566)
Q Consensus 128 ~~~~c~~~~~l~dG~l~vvGG~~~----g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyvvGG~~~-- 201 (566)
+..++..+++..+++||++||... ..+.+++||+. +++|+.+++ |+.+|..++++++ +|+|||+||...
T Consensus 97 p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~---~~~W~~~~~-~p~~r~~~~~~~~-~~~iyv~GG~~~~~ 171 (318)
T 2woz_A 97 PSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPV---AAKWSEVKN-LPIKVYGHNVISH-NGMIYCLGGKTDDK 171 (318)
T ss_dssp SSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETT---TTEEEEECC-CSSCEESCEEEEE-TTEEEEECCEESSS
T ss_pred CccccccceEEECCEEEEEcCccCCCCcccceEEEEeCC---CCCEeECCC-CCCcccccEEEEE-CCEEEEEcCCCCCC
Confidence 877777777777999999999752 24679999999 899999987 9999999998887 899999999742
Q ss_pred ---CeEEEE-eCCCCCCCeeeec-cccccCCCCCCCCccceEEEecCCcEEEEEcC-------eeEEEeccCCeEEEeec
Q 048017 202 ---FTYEFY-PKIDSLSSSLYLR-FLIETRDPGEENNLYPFLHLLPDGNLFIFANR-------RSILFDYINNKLVKEFP 269 (566)
Q Consensus 202 ---~s~E~y-P~~~~~~~w~~~p-~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~-------~~e~yDp~t~~W~~~~p 269 (566)
.++++| |.++ .|...+ +... .+.+..+..+++||++||. +.++||+++++|+ .++
T Consensus 172 ~~~~~~~~yd~~~~---~W~~~~~~p~~---------r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-~~~ 238 (318)
T 2woz_A 172 KCTNRVFIYNPKKG---DWKDLAPMKTP---------RSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWE-VMT 238 (318)
T ss_dssp CBCCCEEEEETTTT---EEEEECCCSSC---------CBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEE-ECC
T ss_pred CccceEEEEcCCCC---EEEECCCCCCC---------cccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEE-ECC
Confidence 368899 8765 787554 3222 1224456679999999983 5789999999999 588
Q ss_pred ccCCCCCCccCCCCceeeecccccCCCCCCCCCCCCCCEEEEEcCCCCCccccccccccccccCCeeEEEEeeCCCCCeE
Q 048017 270 VIPGNDKRNYPSTGSSILLPVKLSAGSDGNGTAALPDAEVMVCGGAPAGAFIKSDKESVYVEASRTCGRLKVTDKYPVWS 349 (566)
Q Consensus 270 ~lp~~~~r~~~~~g~avllpl~~~~~~~~~~y~~~~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~ 349 (566)
++|. +|..+ +++++ +++||++||.........+ ......+++++||+. +++|+
T Consensus 239 ~~p~--~r~~~--~~~~~------------------~~~i~v~GG~~~~~~~~~~---~~~~~~~~v~~yd~~--~~~W~ 291 (318)
T 2woz_A 239 EFPQ--ERSSI--SLVSL------------------AGSLYAIGGFAMIQLESKE---FAPTEVNDIWKYEDD--KKEWA 291 (318)
T ss_dssp CCSS--CCBSC--EEEEE------------------TTEEEEECCBCCBC----C---CBCCBCCCEEEEETT--TTEEE
T ss_pred CCCC--cccce--EEEEE------------------CCEEEEECCeeccCCCCce---eccceeeeEEEEeCC--CCEeh
Confidence 7765 36542 22322 7899999997531100000 001235789999987 58999
Q ss_pred EeccCCCcccceeEEccCCeEEEEc
Q 048017 350 MEFMPMPRVMSDMLLLPSGDVIIIN 374 (566)
Q Consensus 350 ~~~M~~~R~~~~~vvLpdG~V~vvG 374 (566)
.. |+.+|..++++++ +++||+..
T Consensus 292 ~~-~~~~r~~~~~~~~-~~~iyi~~ 314 (318)
T 2woz_A 292 GM-LKEIRYASGASCL-ATRLNLFK 314 (318)
T ss_dssp EE-ESCCGGGTTCEEE-EEEEEGGG
T ss_pred hh-cccccccccceee-CCEEEEEE
Confidence 88 8999999998877 89999864
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.93 E-value=6.5e-25 Score=249.50 Aligned_cols=264 Identities=13% Similarity=0.098 Sum_probs=184.4
Q ss_pred CceEEccCCCccceeEEEEeeCCeEEEEeccCCCCCCCCCCCCccccCCCCCCCcccceEEEEECCCCcEEeCc-C----
Q 048017 52 GQWVLLQSSIGISAMHMQVLNNDKVIIFDRTDMGPSNLSLPIDKCRKEGDVGQLDCTAHSVLYDIASNTFRPLL-L---- 126 (566)
Q Consensus 52 g~W~~l~~~~~~~a~h~~~l~~gkV~~~gg~~~~~s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~-~---- 126 (566)
-+|...+.....+..|+ ++.+++||++||.+. . ....+++||+.+++|+.++ .
T Consensus 377 ~~~~~~~~~p~rr~g~~-~~~~~~iyv~GG~~~--~-------------------~~~~v~~yd~~~~~W~~~~~~~p~~ 434 (695)
T 2zwa_A 377 YQLLECECPINRKFGDV-DVAGNDVFYMGGSNP--Y-------------------RVNEILQLSIHYDKIDMKNIEVSSS 434 (695)
T ss_dssp EEEEECCCTTCCBSCEE-EECSSCEEEECCBSS--S-------------------BCCCEEEEEECSSCEEEEECCCCCS
T ss_pred eeEeccCCCCCCceeEE-EEECCEEEEECCCCC--C-------------------CcCcEEEEECCCCeEEEeccCCCCC
Confidence 45666544333444444 448999999999752 1 1235889999999999887 4
Q ss_pred -CCcccccCCeecC--CCcEEEEcCCCC---CCCeEEEEcCCCCCCCcccccCcccccccCcceEEEecCCcEEEEcCcc
Q 048017 127 -QTDTWCSSGAVLS--DGTLVQTGGYNV---GDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILPDNRIIVVGGRR 200 (566)
Q Consensus 127 -~~~~~c~~~~~l~--dG~l~vvGG~~~---g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyvvGG~~ 200 (566)
++..++..+++.. +|+||++||... ..+++++||+. +++|+.+++ |+.+|++|+++++.+|+|||+||.+
T Consensus 435 ~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~---t~~W~~~~~-~p~~R~~h~~~~~~~~~iyv~GG~~ 510 (695)
T 2zwa_A 435 EVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMK---TREWSMIKS-LSHTRFRHSACSLPDGNVLILGGVT 510 (695)
T ss_dssp CCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETT---TTEEEECCC-CSBCCBSCEEEECTTSCEEEECCBC
T ss_pred CCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCC---CCcEEECCC-CCCCcccceEEEEcCCEEEEECCCC
Confidence 4444444444455 999999999864 25789999999 899999998 9999999999987799999999964
Q ss_pred CCeEEEEeCCCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEcCeeEEEeccCCeEEEeecc---cCCCCCC
Q 048017 201 VFTYEFYPKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANRRSILFDYINNKLVKEFPV---IPGNDKR 277 (566)
Q Consensus 201 ~~s~E~yP~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~~~e~yDp~t~~W~~~~p~---lp~~~~r 277 (566)
.. . ++++||+.+++|+ .+++ +|. +|
T Consensus 511 ~~------------~-------------------------------------~v~~yd~~t~~W~-~~~~~g~~p~--~r 538 (695)
T 2zwa_A 511 EG------------P-------------------------------------AMLLYNVTEEIFK-DVTPKDEFFQ--NS 538 (695)
T ss_dssp SS------------C-------------------------------------SEEEEETTTTEEE-ECCCSSGGGG--SC
T ss_pred CC------------C-------------------------------------CEEEEECCCCceE-EccCCCCCCC--cc
Confidence 21 0 2578999999998 5664 443 35
Q ss_pred ccCCCCceeeecccccCCCCCCCCCCCCCCEEEEEcCCCCCccccccccccccccCCeeEEEEeeCCCCC------eEEe
Q 048017 278 NYPSTGSSILLPVKLSAGSDGNGTAALPDAEVMVCGGAPAGAFIKSDKESVYVEASRTCGRLKVTDKYPV------WSME 351 (566)
Q Consensus 278 ~~~~~g~avllpl~~~~~~~~~~y~~~~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~------W~~~ 351 (566)
..+ +++++ . . . .++||++||..... ...++++++||+.. ++ |+..
T Consensus 539 ~~~--~a~v~-~----------~-~---~~~iyv~GG~~~~~----------~~~~~~v~~yd~~~--~~w~~~~~W~~~ 589 (695)
T 2zwa_A 539 LVS--AGLEF-D----------P-V---SKQGIILGGGFMDQ----------TTVSDKAIIFKYDA--ENATEPITVIKK 589 (695)
T ss_dssp CBS--CEEEE-E----------T-T---TTEEEEECCBCTTS----------SCBCCEEEEEEECT--TCSSCCEEEEEE
T ss_pred cce--eEEEE-e----------C-C---CCEEEEECCcCCCC----------CeeeCcEEEEEccC--CccccceEEEEc
Confidence 542 22332 1 0 0 38999999975321 02357899999974 66 8876
Q ss_pred -cc-CCCcccceeEEccCCeEEEEcCCCCCCC----CCccccCc-CCcEEeccCCCC--------CCcceeEEEEcCCCc
Q 048017 352 -FM-PMPRVMSDMLLLPSGDVIIINGASNGTA----GWEDAEEP-DRRFVVLNPSKI--------PRMYHSSAVVLPDGR 416 (566)
Q Consensus 352 -~M-~~~R~~~~~vvLpdG~V~vvGG~~~g~~----~~~~~ydP-t~~Wt~~~~~~~--------~R~yhs~a~LlpdG~ 416 (566)
+| +.+|..++++++-+|+|||+||...... ....+||| +++|+.+. ++. .|..|+ ++++.||+
T Consensus 590 ~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~-~p~~~~~~~~p~~~gh~-~~~~~~g~ 667 (695)
T 2zwa_A 590 LQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLTSIP-ISRRIWEDHSLMLAGFS-LVSTSMGT 667 (695)
T ss_dssp EECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEEECC-CCHHHHHHSCCCCSSCE-EECC---C
T ss_pred CCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEEEee-ccccccCCCCccceeee-EEEeCCCE
Confidence 76 5899999988874499999999752211 12357999 99999542 211 244576 45567889
Q ss_pred EEEecCCC
Q 048017 417 ILVGGSNP 424 (566)
Q Consensus 417 V~v~GG~~ 424 (566)
|||.||+.
T Consensus 668 i~v~GGg~ 675 (695)
T 2zwa_A 668 IHIIGGGA 675 (695)
T ss_dssp EEEECCEE
T ss_pred EEEEeCCc
Confidence 99999963
No 17
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.92 E-value=3.2e-24 Score=223.12 Aligned_cols=240 Identities=13% Similarity=0.104 Sum_probs=167.4
Q ss_pred CCceEEccCCC-ccceeEEEEeeCCeEEEEeccCCCCCCCCCCCCccccCCCCCCCcccceEEEEECCCCcEEeCcCCC-
Q 048017 51 GGQWVLLQSSI-GISAMHMQVLNNDKVIIFDRTDMGPSNLSLPIDKCRKEGDVGQLDCTAHSVLYDIASNTFRPLLLQT- 128 (566)
Q Consensus 51 ~g~W~~l~~~~-~~~a~h~~~l~~gkV~~~gg~~~~~s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~- 128 (566)
.++|+.+++++ ..+..|++++.+++||++||...... +.. .....+++||+.+++|+.++.+.
T Consensus 42 ~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~------~~~---------~~~~~v~~yd~~~~~W~~~~~~~p 106 (357)
T 2uvk_A 42 DKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSE------GLT---------QVFNDVHKYNPKTNSWVKLMSHAP 106 (357)
T ss_dssp SCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTT------SCE---------EECCCEEEEETTTTEEEECSCCCS
T ss_pred CCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCC------ccc---------eeeccEEEEeCCCCcEEECCCCCC
Confidence 37999998876 57788998889999999999721000 000 02356899999999999998776
Q ss_pred cccccCCeecCCCcEEEEcCCCC------------------------------------CCCeEEEEcCCCCCCCccccc
Q 048017 129 DTWCSSGAVLSDGTLVQTGGYNV------------------------------------GDRVIRLFTPCNDEGCDWVEL 172 (566)
Q Consensus 129 ~~~c~~~~~l~dG~l~vvGG~~~------------------------------------g~~~v~~ydP~~~~t~~W~~~ 172 (566)
..++...++..+++||++||... ..+.+++|||. +++|+.+
T Consensus 107 ~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~---~~~W~~~ 183 (357)
T 2uvk_A 107 MGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPS---TQQWSYA 183 (357)
T ss_dssp SCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETT---TTEEEEE
T ss_pred cccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCC---CCcEEEC
Confidence 56665556668999999999752 14789999999 8999999
Q ss_pred CcccccccCc-ceEEEecCCcEEEEcCccC-----CeEEEE-e--CCCCCCCeeeeccccccCCCCCCCCccceEEEecC
Q 048017 173 SKNLWDRRWY-ASNQILPDNRIIVVGGRRV-----FTYEFY-P--KIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPD 243 (566)
Q Consensus 173 ~~~M~~~R~y-~s~~~L~dG~VyvvGG~~~-----~s~E~y-P--~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~ 243 (566)
++ |+.+|.+ ++++++ +++|||+||... ..+++| . .++ .|...+.+.. +...+.++.++.+
T Consensus 184 ~~-~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~---~W~~~~~~~~------~~~~~~~~~~~~~ 252 (357)
T 2uvk_A 184 GE-SPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNL---KWNKLAPVSS------PDGVAGGFAGISN 252 (357)
T ss_dssp EE-CSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---C---EEEECCCSST------TTCCBSCEEEEET
T ss_pred CC-CCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCC---cEEecCCCCC------CcccccceEEEEC
Confidence 87 9987766 777777 899999999753 245566 3 543 7875433211 1123344567789
Q ss_pred CcEEEEEcC------------------------eeEEEeccCCeEEEeecccCCCCCCccCCCCceeeecccccCCCCCC
Q 048017 244 GNLFIFANR------------------------RSILFDYINNKLVKEFPVIPGNDKRNYPSTGSSILLPVKLSAGSDGN 299 (566)
Q Consensus 244 G~Ifv~Gg~------------------------~~e~yDp~t~~W~~~~p~lp~~~~r~~~~~g~avllpl~~~~~~~~~ 299 (566)
++||++||. ++++||+++++|+ .++++|. +|..+ +++.+
T Consensus 253 ~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~--~r~~~---~~~~~----------- 315 (357)
T 2uvk_A 253 DSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWD-KSGELSQ--GRAYG---VSLPW----------- 315 (357)
T ss_dssp TEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CE-EEEECSS--CCBSS---EEEEE-----------
T ss_pred CEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCcee-eCCCCCC--Ccccc---eeEEe-----------
Confidence 999999993 4789999999999 5777775 46652 23332
Q ss_pred CCCCCCCCEEEEEcCCCCCccccccccccccccCCeeEEEEeeCCCCCeEEe-ccCC
Q 048017 300 GTAALPDAEVMVCGGAPAGAFIKSDKESVYVEASRTCGRLKVTDKYPVWSME-FMPM 355 (566)
Q Consensus 300 ~y~~~~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~-~M~~ 355 (566)
+++|||+||.+... ..+++++++++. +++|... +.+.
T Consensus 316 ------~~~i~v~GG~~~~~-----------~~~~~v~~l~~~--~~~~~~~~~~~~ 353 (357)
T 2uvk_A 316 ------NNSLLIIGGETAGG-----------KAVTDSVLITVK--DNKVTVQNLEHH 353 (357)
T ss_dssp ------TTEEEEEEEECGGG-----------CEEEEEEEEEC---CCSCEEEC----
T ss_pred ------CCEEEEEeeeCCCC-----------CEeeeEEEEEEc--CcEeEeeecccc
Confidence 89999999976321 235788988887 4899876 5553
No 18
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.85 E-value=1.8e-20 Score=212.94 Aligned_cols=227 Identities=12% Similarity=0.193 Sum_probs=162.5
Q ss_pred CCCceEEcc-C-----CCccceeEEEEee--CCeEEEEeccCCCCCCCCCCCCccccCCCCCCCcccceEEEEECCCCcE
Q 048017 50 SGGQWVLLQ-S-----SIGISAMHMQVLN--NDKVIIFDRTDMGPSNLSLPIDKCRKEGDVGQLDCTAHSVLYDIASNTF 121 (566)
Q Consensus 50 ~~g~W~~l~-~-----~~~~~a~h~~~l~--~gkV~~~gg~~~~~s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp~t~~w 121 (566)
..++|+.++ + ++..+..|+++.. +|+||++||.+. ... ....+++||+.+++|
T Consensus 420 ~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~-~~~------------------~~~dv~~yd~~t~~W 480 (695)
T 2zwa_A 420 HYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKA-PHQ------------------GLSDNWIFDMKTREW 480 (695)
T ss_dssp CSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSS-TTC------------------BCCCCEEEETTTTEE
T ss_pred CCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCC-CCC------------------ccccEEEEeCCCCcE
Confidence 357999987 4 4566778888888 999999999752 110 124589999999999
Q ss_pred EeCcCCCcccccCCeec-CCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCc--ccccccCcceEEEecC---CcEEE
Q 048017 122 RPLLLQTDTWCSSGAVL-SDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSK--NLWDRRWYASNQILPD---NRIIV 195 (566)
Q Consensus 122 ~~l~~~~~~~c~~~~~l-~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~--~M~~~R~y~s~~~L~d---G~Vyv 195 (566)
+.++.++..++..++++ .+|+||++||..... .+++|||. +++|+.++. .|+.+|..++++++ + |+|||
T Consensus 481 ~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~-~v~~yd~~---t~~W~~~~~~g~~p~~r~~~~a~v~-~~~~~~iyv 555 (695)
T 2zwa_A 481 SMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP-AMLLYNVT---EEIFKDVTPKDEFFQNSLVSAGLEF-DPVSKQGII 555 (695)
T ss_dssp EECCCCSBCCBSCEEEECTTSCEEEECCBCSSC-SEEEEETT---TTEEEECCCSSGGGGSCCBSCEEEE-ETTTTEEEE
T ss_pred EECCCCCCCcccceEEEEcCCEEEEECCCCCCC-CEEEEECC---CCceEEccCCCCCCCcccceeEEEE-eCCCCEEEE
Confidence 99998877776666666 599999999986433 89999999 899999874 38889999987877 4 89999
Q ss_pred EcCccCCeEEEEeCCCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEcCeeEEEeccCCe------EEEeec
Q 048017 196 VGGRRVFTYEFYPKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANRRSILFDYINNK------LVKEFP 269 (566)
Q Consensus 196 vGG~~~~s~E~yP~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~~~e~yDp~t~~------W~~~~p 269 (566)
+||..... . . .+ +++++||+.+++ |. .++
T Consensus 556 ~GG~~~~~------~----~-----~~-----------------------------~~v~~yd~~~~~w~~~~~W~-~~~ 590 (695)
T 2zwa_A 556 LGGGFMDQ------T----T-----VS-----------------------------DKAIIFKYDAENATEPITVI-KKL 590 (695)
T ss_dssp ECCBCTTS------S----C-----BC-----------------------------CEEEEEEECTTCSSCCEEEE-EEE
T ss_pred ECCcCCCC------C----e-----ee-----------------------------CcEEEEEccCCccccceEEE-EcC
Confidence 99964210 0 0 00 146789999999 77 465
Q ss_pred ccCCCCCCccCCCCceeeecccccCCCCCCCCCCCCC-CEEEEEcCCCCCccccccccccccccCCeeEEEEeeCCCCCe
Q 048017 270 VIPGNDKRNYPSTGSSILLPVKLSAGSDGNGTAALPD-AEVMVCGGAPAGAFIKSDKESVYVEASRTCGRLKVTDKYPVW 348 (566)
Q Consensus 270 ~lp~~~~r~~~~~g~avllpl~~~~~~~~~~y~~~~~-gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W 348 (566)
++|. .+|..+ +++++ + ++||++||.+.... ....+++++||+. +++|
T Consensus 591 ~~p~-~~R~~~--~~~~~------------------~~~~iyv~GG~~~~~~---------~~~~~~v~~yd~~--t~~W 638 (695)
T 2zwa_A 591 QHPL-FQRYGS--QIKYI------------------TPRKLLIVGGTSPSGL---------FDRTNSIISLDPL--SETL 638 (695)
T ss_dssp ECGG-GCCBSC--EEEEE------------------ETTEEEEECCBCSSCC---------CCTTTSEEEEETT--TTEE
T ss_pred CCCC-CCcccc--eEEEe------------------CCCEEEEECCccCCCC---------CCCCCeEEEEECC--CCeE
Confidence 4432 146542 22332 5 99999999753210 0235789999987 5899
Q ss_pred EEeccCC--------CcccceeEEccCCeEEEEcCCC
Q 048017 349 SMEFMPM--------PRVMSDMLLLPSGDVIIINGAS 377 (566)
Q Consensus 349 ~~~~M~~--------~R~~~~~vvLpdG~V~vvGG~~ 377 (566)
+..+++. .|..|+++++.+|+|||+||..
T Consensus 639 ~~~~~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg~ 675 (695)
T 2zwa_A 639 TSIPISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGGA 675 (695)
T ss_dssp EECCCCHHHHHHSCCCCSSCEEECC---CEEEECCEE
T ss_pred EEeeccccccCCCCccceeeeEEEeCCCEEEEEeCCc
Confidence 9645442 3456888888778999999964
No 19
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.72 E-value=0.011 Score=58.59 Aligned_cols=206 Identities=15% Similarity=0.143 Sum_probs=111.4
Q ss_pred eEEEEECCCCc--EEeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEE
Q 048017 110 HSVLYDIASNT--FRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQI 187 (566)
Q Consensus 110 ~~~~yDp~t~~--w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~ 187 (566)
.+.++|+++++ |+.-... ...++...+++||++|+.+ .+.+..|||.. .-.|+--.. .....+++..
T Consensus 16 ~v~~~d~~tG~~~w~~~~~~-~~~~~~~~~~pdG~ilvs~-----~~~V~~~d~~G--~~~W~~~~~---~~~~~~~~~~ 84 (276)
T 3no2_A 16 KIAIINKDTKEIVWEYPLEK-GWECNSVAATKAGEILFSY-----SKGAKMITRDG--RELWNIAAP---AGCEMQTARI 84 (276)
T ss_dssp EEEEEETTTTEEEEEEECCT-TCCCCEEEECTTSCEEEEC-----BSEEEEECTTS--CEEEEEECC---TTCEEEEEEE
T ss_pred EEEEEECCCCeEEEEeCCCc-cCCCcCeEECCCCCEEEeC-----CCCEEEECCCC--CEEEEEcCC---CCccccccEE
Confidence 36788888876 4432211 1234556778899999943 25689999941 456764321 1112346778
Q ss_pred ecCCcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEc--CeeEEEeccCCeE
Q 048017 188 LPDNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFAN--RRSILFDYINNKL 264 (566)
Q Consensus 188 L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg--~~~e~yDp~t~~W 264 (566)
++||++++........+..+ |.-+ ..|. .++-..... .......+..+++|++++... ..+.+||++ ++.
T Consensus 85 ~~dG~~lv~~~~~~~~v~~vd~~Gk--~l~~-~~~~~~~~~---~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~ 157 (276)
T 3no2_A 85 LPDGNALVAWCGHPSTILEVNMKGE--VLSK-TEFETGIER---PHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQL 157 (276)
T ss_dssp CTTSCEEEEEESTTEEEEEECTTSC--EEEE-EEECCSCSS---GGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred CCCCCEEEEecCCCCEEEEEeCCCC--EEEE-EeccCCCCc---ccccccCceECCCCCEEEEecCCCEEEEECCC-CCE
Confidence 89999998865422223233 4211 1122 111000000 001112334678999888764 457889998 543
Q ss_pred EEeecccCCCCCCccCCCCceeeecccccCCCCCCCCCCCCCCEEEEEcCCCCCccccccccccccccCCeeEEEEeeCC
Q 048017 265 VKEFPVIPGNDKRNYPSTGSSILLPVKLSAGSDGNGTAALPDAEVMVCGGAPAGAFIKSDKESVYVEASRTCGRLKVTDK 344 (566)
Q Consensus 265 ~~~~p~lp~~~~r~~~~~g~avllpl~~~~~~~~~~y~~~~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d~~~~ 344 (566)
..... .+. .+. + +..++ +|.+++++... ..+..+|+...
T Consensus 158 ~w~~~-~~~-----~~~-~-~~~~~----------------~g~~~v~~~~~-----------------~~v~~~d~~tG 196 (276)
T 3no2_A 158 LNSVK-LSG-----TPF-S-SAFLD----------------NGDCLVACGDA-----------------HCFVQLNLESN 196 (276)
T ss_dssp EEEEE-CSS-----CCC-E-EEECT----------------TSCEEEECBTT-----------------SEEEEECTTTC
T ss_pred EEEEE-CCC-----Ccc-c-eeEcC----------------CCCEEEEeCCC-----------------CeEEEEeCcCC
Confidence 32332 111 121 2 22221 67888876542 23556776544
Q ss_pred CCCeEEe--ccCCCcc--cceeEEccCCeEEEEc
Q 048017 345 YPVWSME--FMPMPRV--MSDMLLLPSGDVIIIN 374 (566)
Q Consensus 345 ~~~W~~~--~M~~~R~--~~~~vvLpdG~V~vvG 374 (566)
+-.|+.. ..+..|. ..++.+++||.|||..
T Consensus 197 ~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 197 RIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp CEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred cEEEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence 5678875 3333232 3455678999999998
No 20
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.68 E-value=0.025 Score=56.99 Aligned_cols=268 Identities=14% Similarity=0.064 Sum_probs=137.4
Q ss_pred ceEEEEECCCCcEEeCcC------CCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCccc-ccCcccccccC
Q 048017 109 AHSVLYDIASNTFRPLLL------QTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWV-ELSKNLWDRRW 181 (566)
Q Consensus 109 ~~~~~yDp~t~~w~~l~~------~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~-~~~~~M~~~R~ 181 (566)
..+.+||++|+++...-. ....+.. ...+.++++|++... ...+.++|+. +.+-. .++. ...++
T Consensus 17 ~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~-~i~~~~~~lyv~~~~---~~~v~viD~~---t~~~~~~i~~-~~~p~- 87 (328)
T 3dsm_A 17 ATLSYYDPATCEVENEVFYRANGFKLGDVAQ-SMVIRDGIGWIVVNN---SHVIFAIDIN---TFKEVGRITG-FTSPR- 87 (328)
T ss_dssp BEEEEEETTTTEEECSHHHHHHSSCCBSCEE-EEEEETTEEEEEEGG---GTEEEEEETT---TCCEEEEEEC-CSSEE-
T ss_pred ceEEEEECCCCEEhhhhHhhhcCcccCccce-EEEEECCEEEEEEcC---CCEEEEEECc---ccEEEEEcCC-CCCCc-
Confidence 458899999999875321 0011111 233457888888642 3679999998 55432 1221 22222
Q ss_pred cceEEEecCCcEEEEcCccCCeEEEE-eCCCCCCCee-eeccccccCCCCCCCCccceEEEecCCcEEEEE---cCeeEE
Q 048017 182 YASNQILPDNRIIVVGGRRVFTYEFY-PKIDSLSSSL-YLRFLIETRDPGEENNLYPFLHLLPDGNLFIFA---NRRSIL 256 (566)
Q Consensus 182 y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~-~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~G---g~~~e~ 256 (566)
..+.-+||++||.... ...+.++ +.+. ... ..+.-... .....|...+..+++||+.. +....+
T Consensus 88 --~i~~~~~g~lyv~~~~-~~~v~~iD~~t~---~~~~~i~~g~~~-----~~~~~p~~i~~~~~~lyv~~~~~~~~v~v 156 (328)
T 3dsm_A 88 --YIHFLSDEKAYVTQIW-DYRIFIINPKTY---EITGYIECPDMD-----MESGSTEQMVQYGKYVYVNCWSYQNRILK 156 (328)
T ss_dssp --EEEEEETTEEEEEEBS-CSEEEEEETTTT---EEEEEEECTTCC-----TTTCBCCCEEEETTEEEEEECTTCCEEEE
T ss_pred --EEEEeCCCeEEEEECC-CCeEEEEECCCC---eEEEEEEcCCcc-----ccCCCcceEEEECCEEEEEcCCCCCEEEE
Confidence 2333278999998743 2345556 5442 111 12211100 00013444445788999885 356889
Q ss_pred EeccCCeEEEeecccCCCCCCccCCCCceeeecccccCCCCCCCCCCCCCCEEEEEcCCCCCccccccccccccccCCee
Q 048017 257 FDYINNKLVKEFPVIPGNDKRNYPSTGSSILLPVKLSAGSDGNGTAALPDAEVMVCGGAPAGAFIKSDKESVYVEASRTC 336 (566)
Q Consensus 257 yDp~t~~W~~~~p~lp~~~~r~~~~~g~avllpl~~~~~~~~~~y~~~~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~ 336 (566)
+|+++++..+.++ .. ..|. +.+ +- .+|++|+..-...... .+......+
T Consensus 157 iD~~t~~~~~~i~---~g---~~p~-~i~-~~----------------~dG~l~v~~~~~~~~~-------~~~~~~~~v 205 (328)
T 3dsm_A 157 IDTETDKVVDELT---IG---IQPT-SLV-MD----------------KYNKMWTITDGGYEGS-------PYGYEAPSL 205 (328)
T ss_dssp EETTTTEEEEEEE---CS---SCBC-CCE-EC----------------TTSEEEEEBCCBCTTC-------SSCBCCCEE
T ss_pred EECCCCeEEEEEE---cC---CCcc-ceE-Ec----------------CCCCEEEEECCCccCC-------ccccCCceE
Confidence 9999998775553 11 1121 222 21 1689888764221000 011113568
Q ss_pred EEEEeeCCCCCeEEe-ccCCCcccceeEEccC-CeEEEEcCCCCCCCCCccccCc-CCcEEeccCCCC-CCcceeEEEEc
Q 048017 337 GRLKVTDKYPVWSME-FMPMPRVMSDMLLLPS-GDVIIINGASNGTAGWEDAEEP-DRRFVVLNPSKI-PRMYHSSAVVL 412 (566)
Q Consensus 337 ~~~d~~~~~~~W~~~-~M~~~R~~~~~vvLpd-G~V~vvGG~~~g~~~~~~~ydP-t~~Wt~~~~~~~-~R~yhs~a~Ll 412 (566)
.+||+.. .+.... .++....-.+.++-|| +++|+.++ ....+|+ +.+.....-.+. ...-.+. .+-
T Consensus 206 ~~id~~t--~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~-------~v~~~d~~t~~~~~~~~~~~~~~~p~gi-~vd 275 (328)
T 3dsm_A 206 YRIDAET--FTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN-------DIWRMPVEADRVPVRPFLEFRDTKYYGL-TVN 275 (328)
T ss_dssp EEEETTT--TEEEEEEECCTTCCCEEEEECTTSCEEEEESS-------SEEEEETTCSSCCSSCSBCCCSSCEEEE-EEC
T ss_pred EEEECCC--CeEEEEEecCCCCCceeEEEecCCCEEEEEcc-------EEEEEECCCCceeeeeeecCCCCceEEE-EEc
Confidence 8888752 444333 4443322234445565 45777765 1335777 544321111111 2233333 456
Q ss_pred C-CCcEEEecCCCCcccccCCCCCCCcceEEEEecc
Q 048017 413 P-DGRILVGGSNPHRRYNFTAYPYPTDLSLEAFHPH 447 (566)
Q Consensus 413 p-dG~V~v~GG~~~~~~~~~~~~~~~~~~vE~y~Pp 447 (566)
| +|+|||+.... |....+|.+|+|.
T Consensus 276 p~~g~lyva~~~~----------y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 276 PNNGEVYVADAID----------YQQQGIVYRYSPQ 301 (328)
T ss_dssp TTTCCEEEEECTT----------SSSEEEEEEECTT
T ss_pred CCCCeEEEEcccc----------cccCCEEEEECCC
Confidence 6 89999996321 1123468888875
No 21
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.63 E-value=0.042 Score=54.04 Aligned_cols=152 Identities=14% Similarity=0.167 Sum_probs=86.6
Q ss_pred EEEeeCCeEEEEeccCCCCCCCCCCCCccccCCCCCCCcccceEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEc
Q 048017 68 MQVLNNDKVIIFDRTDMGPSNLSLPIDKCRKEGDVGQLDCTAHSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTG 147 (566)
Q Consensus 68 ~~~l~~gkV~~~gg~~~~~s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvG 147 (566)
...-++|+.++.++.+ | .+.+||..+++....-..+..........++|+++++|
T Consensus 29 ~~~s~~~~~l~s~~~d----------g---------------~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 83 (312)
T 4ery_A 29 VKFSPNGEWLASSSAD----------K---------------LIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSA 83 (312)
T ss_dssp EEECTTSSEEEEEETT----------S---------------CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred EEECCCCCEEEEeeCC----------C---------------eEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEE
Confidence 3344688888887754 1 26788888877655433232222334556799999999
Q ss_pred CCCCCCCeEEEEcCCCCCCCcccccCcccccccC-cceEEEecCCcEEEEcCccCCeEEEE-eCCCCCCCeeeecccccc
Q 048017 148 GYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRW-YASNQILPDNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIET 225 (566)
Q Consensus 148 G~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~-y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~ 225 (566)
+.+ ..+++||.. +.+-. .. +..... -.+...-++++.++.|+.++ .+.+| ..+. ..-...+ ..
T Consensus 84 ~~d---~~i~vwd~~---~~~~~--~~-~~~~~~~v~~~~~~~~~~~l~s~~~d~-~i~iwd~~~~--~~~~~~~---~~ 148 (312)
T 4ery_A 84 SDD---KTLKIWDVS---SGKCL--KT-LKGHSNYVFCCNFNPQSNLIVSGSFDE-SVRIWDVKTG--KCLKTLP---AH 148 (312)
T ss_dssp ETT---SEEEEEETT---TCCEE--EE-EECCSSCEEEEEECSSSSEEEEEETTS-CEEEEETTTC--CEEEEEC---CC
T ss_pred CCC---CEEEEEECC---CCcEE--EE-EcCCCCCEEEEEEcCCCCEEEEEeCCC-cEEEEECCCC--EEEEEec---CC
Confidence 864 578999987 43321 11 221111 12334456889998888764 45566 3321 0111111 10
Q ss_pred CCCCCCCCccceEEEecCCcEEEEEcC--eeEEEeccCCeEE
Q 048017 226 RDPGEENNLYPFLHLLPDGNLFIFANR--RSILFDYINNKLV 265 (566)
Q Consensus 226 ~d~~~~~~~yp~~~~l~~G~Ifv~Gg~--~~e~yDp~t~~W~ 265 (566)
.. .--.+...++|++++.|+. ...+||..+++..
T Consensus 149 ~~------~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~ 184 (312)
T 4ery_A 149 SD------PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 184 (312)
T ss_dssp SS------CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE
T ss_pred CC------cEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcee
Confidence 00 0012233568999888875 4678999887654
No 22
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.50 E-value=0.03 Score=56.03 Aligned_cols=153 Identities=13% Similarity=0.097 Sum_probs=85.4
Q ss_pred EEEeeCCeEEEEeccCCCCCCCCCCCCccccCCCCCCCcccceEEEEECCCCcEEeCcCC--CcccccCCeecCCCcEEE
Q 048017 68 MQVLNNDKVIIFDRTDMGPSNLSLPIDKCRKEGDVGQLDCTAHSVLYDIASNTFRPLLLQ--TDTWCSSGAVLSDGTLVQ 145 (566)
Q Consensus 68 ~~~l~~gkV~~~gg~~~~~s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~--~~~~c~~~~~l~dG~l~v 145 (566)
...-++|++++.|+.+ ..+.+||..+++++.+... +..........++|++++
T Consensus 14 ~~~s~~~~~l~~~~~d-------------------------~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 68 (372)
T 1k8k_C 14 HAWNKDRTQIAICPNN-------------------------HEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIV 68 (372)
T ss_dssp EEECTTSSEEEEECSS-------------------------SEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEE
T ss_pred EEECCCCCEEEEEeCC-------------------------CEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEE
Confidence 3444689988888643 1378899998876555432 222222344557899999
Q ss_pred EcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEecCCcEEEEcCccCCeEEEE-eCCCCCCCeee-ecccc
Q 048017 146 TGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILPDNRIIVVGGRRVFTYEFY-PKIDSLSSSLY-LRFLI 223 (566)
Q Consensus 146 vGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~-~p~l~ 223 (566)
+|+.+ ..+.+||.. +.++............-.+....++|+.+++|+.++ .+.+| .... ..+.. .....
T Consensus 69 ~~~~d---g~i~vwd~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~v~i~d~~~~--~~~~~~~~~~~ 139 (372)
T 1k8k_C 69 TCGTD---RNAYVWTLK---GRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSR-VISICYFEQE--NDWWVCKHIKK 139 (372)
T ss_dssp EEETT---SCEEEEEEE---TTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTS-SEEEEEEETT--TTEEEEEEECT
T ss_pred EEcCC---CeEEEEECC---CCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCC-EEEEEEecCC--Ccceeeeeeec
Confidence 98853 468889987 555543322011222223444556899999988664 34455 3221 12221 11111
Q ss_pred ccCCCCCCCCccceEEEecCCcEEEEEcC--eeEEEecc
Q 048017 224 ETRDPGEENNLYPFLHLLPDGNLFIFANR--RSILFDYI 260 (566)
Q Consensus 224 ~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~--~~e~yDp~ 260 (566)
... ..--.+...++|++++.|+. ...+||..
T Consensus 140 ~~~------~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~ 172 (372)
T 1k8k_C 140 PIR------STVLSLDWHPNSVLLAAGSCDFKCRIFSAY 172 (372)
T ss_dssp TCC------SCEEEEEECTTSSEEEEEETTSCEEEEECC
T ss_pred ccC------CCeeEEEEcCCCCEEEEEcCCCCEEEEEcc
Confidence 100 01112334568998888874 46778853
No 23
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.50 E-value=0.045 Score=54.35 Aligned_cols=163 Identities=12% Similarity=-0.002 Sum_probs=85.8
Q ss_pred EEEeeCCeEEEEeccCCCCCCCCCCCCccccCCCCCCCcccceEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEc
Q 048017 68 MQVLNNDKVIIFDRTDMGPSNLSLPIDKCRKEGDVGQLDCTAHSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTG 147 (566)
Q Consensus 68 ~~~l~~gkV~~~gg~~~~~s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvG 147 (566)
.+.-++|+.++.++.+ | .+.+||..+++....-..+.....+....++|+.+++|
T Consensus 38 ~~~s~~~~~l~~~~~d----------g---------------~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 92 (369)
T 3zwl_B 38 VKYNKEGDLLFSCSKD----------S---------------SASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTG 92 (369)
T ss_dssp EEECTTSCEEEEEESS----------S---------------CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred EEEcCCCCEEEEEeCC----------C---------------EEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEE
Confidence 3444689988888753 1 26788988776543222222222233455789999998
Q ss_pred CCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEecCCcEEEEcCcc----CCeEEEE-eCCCC-CCCeeeec-
Q 048017 148 GYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILPDNRIIVVGGRR----VFTYEFY-PKIDS-LSSSLYLR- 220 (566)
Q Consensus 148 G~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyvvGG~~----~~s~E~y-P~~~~-~~~w~~~p- 220 (566)
+.+ ..+.+||.. +.+... . +.....-.+.+..++|+.+++++.+ ...+.+| ..... ........
T Consensus 93 ~~d---g~i~iwd~~---~~~~~~--~-~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~ 163 (369)
T 3zwl_B 93 SAD---YSIKLWDVS---NGQCVA--T-WKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSE 163 (369)
T ss_dssp ETT---TEEEEEETT---TCCEEE--E-EECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECS
T ss_pred eCC---CeEEEEECC---CCcEEE--E-eecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeeccccc
Confidence 864 578999987 443322 1 2223333445566789988888754 1345555 22210 00111100
Q ss_pred -cccccCCCCCCCCccceEEEecCCcEEEEEcC--eeEEEeccC-CeEE
Q 048017 221 -FLIETRDPGEENNLYPFLHLLPDGNLFIFANR--RSILFDYIN-NKLV 265 (566)
Q Consensus 221 -~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~--~~e~yDp~t-~~W~ 265 (566)
........ ........+...++|+.++.|+. ...+||..+ .+..
T Consensus 164 ~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 211 (369)
T 3zwl_B 164 EPIHKIITH-EGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYV 211 (369)
T ss_dssp SCSEEEECC-TTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEE
T ss_pred ceeeeccCC-cCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeE
Confidence 00000000 00001122334578888888875 467899988 4433
No 24
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.45 E-value=0.031 Score=56.21 Aligned_cols=260 Identities=16% Similarity=0.164 Sum_probs=128.7
Q ss_pred eeCCeEEEEeccCCCCCCCCCCCCccccCCCCCCCcccceEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCC
Q 048017 71 LNNDKVIIFDRTDMGPSNLSLPIDKCRKEGDVGQLDCTAHSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYN 150 (566)
Q Consensus 71 l~~gkV~~~gg~~~~~s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~ 150 (566)
-++|++++.|+.+ ..+.+||..+.+-...-..+..........++|+.+++||.+
T Consensus 64 s~d~~~l~s~s~D-------------------------g~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d 118 (340)
T 1got_B 64 GTDSRLLLSASQD-------------------------GKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLD 118 (340)
T ss_dssp CTTSSEEEEEETT-------------------------TEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETT
T ss_pred CCCCCEEEEEeCC-------------------------CcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCC
Confidence 3688888887653 136788887766433222222222234456799999999874
Q ss_pred CCCCeEEEEcCCCCCCCc--ccccCcccccccCcc-eEEEecCCcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccC
Q 048017 151 VGDRVIRLFTPCNDEGCD--WVELSKNLWDRRWYA-SNQILPDNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETR 226 (566)
Q Consensus 151 ~g~~~v~~ydP~~~~t~~--W~~~~~~M~~~R~y~-s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~ 226 (566)
..+++||.. +.. ...... +......- ++...++++ ++.|+.+ ..+.+| ..+. ..... +....
T Consensus 119 ---~~v~iw~~~---~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~-l~s~s~d-~~i~~wd~~~~----~~~~~-~~~h~ 184 (340)
T 1got_B 119 ---NICSIYNLK---TREGNVRVSRE-LAGHTGYLSCCRFLDDNQ-IVTSSGD-TTCALWDIETG----QQTTT-FTGHT 184 (340)
T ss_dssp ---CEEEEEETT---TCSBSCEEEEE-EECCSSCEEEEEEEETTE-EEEEETT-SCEEEEETTTT----EEEEE-ECCCS
T ss_pred ---CeEEEEECc---cCCCcceeEEE-ecCCCccEEEEEECCCCc-EEEEECC-CcEEEEECCCC----cEEEE-EcCCC
Confidence 578899986 322 111111 22111122 233344666 4555544 346666 3321 11111 11110
Q ss_pred CCCCCCCccceEEEecCCcEEEEEcC--eeEEEeccCCeEEEeecccCCCCCCccCCCCceeeecccccCCCCCCCCCCC
Q 048017 227 DPGEENNLYPFLHLLPDGNLFIFANR--RSILFDYINNKLVKEFPVIPGNDKRNYPSTGSSILLPVKLSAGSDGNGTAAL 304 (566)
Q Consensus 227 d~~~~~~~yp~~~~l~~G~Ifv~Gg~--~~e~yDp~t~~W~~~~p~lp~~~~r~~~~~g~avllpl~~~~~~~~~~y~~~ 304 (566)
. .--.+...++|++++.|+. .+.+||..+++-.+.+ ... ... -.++. ..|
T Consensus 185 ~------~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~---~~h--~~~---v~~v~--~~p------------ 236 (340)
T 1got_B 185 G------DVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTF---TGH--ESD---INAIC--FFP------------ 236 (340)
T ss_dssp S------CEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEE---CCC--SSC---EEEEE--ECT------------
T ss_pred C------ceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEE---cCC--cCC---EEEEE--EcC------------
Confidence 0 0112334578999998874 4678999887644322 221 110 01111 111
Q ss_pred CCCEEEEEcCCCCCccccccccccccccCCeeEEEEeeCCCCCeEEe-ccCCCc-ccceeEEccCCeEEEEcCCCCCCCC
Q 048017 305 PDAEVMVCGGAPAGAFIKSDKESVYVEASRTCGRLKVTDKYPVWSME-FMPMPR-VMSDMLLLPSGDVIIINGASNGTAG 382 (566)
Q Consensus 305 ~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~-~M~~~R-~~~~~vvLpdG~V~vvGG~~~g~~~ 382 (566)
+++.+++|+.+ .++..+|+.. .+-... ...... .-.....-|+|+++++|+.+ +
T Consensus 237 -~~~~l~s~s~d-----------------~~v~iwd~~~--~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d-~--- 292 (340)
T 1got_B 237 -NGNAFATGSDD-----------------ATCRLFDLRA--DQELMTYSHDNIICGITSVSFSKSGRLLLAGYDD-F--- 292 (340)
T ss_dssp -TSSEEEEEETT-----------------SCEEEEETTT--TEEEEEECCTTCCSCEEEEEECTTSSEEEEEETT-S---
T ss_pred -CCCEEEEEcCC-----------------CcEEEEECCC--CcEEEEEccCCcccceEEEEECCCCCEEEEECCC-C---
Confidence 67788888765 2344455532 111111 111100 11222345899999998865 3
Q ss_pred CccccCc--CCcEEeccCCCCCCcceeEEEEcCCCcEEEecCCC
Q 048017 383 WEDAEEP--DRRFVVLNPSKIPRMYHSSAVVLPDGRILVGGSNP 424 (566)
Q Consensus 383 ~~~~ydP--t~~Wt~~~~~~~~R~yhs~a~LlpdG~V~v~GG~~ 424 (566)
....||. ...-..+.... ..-.+....|||+.+++||..
T Consensus 293 ~i~vwd~~~~~~~~~~~~h~---~~v~~~~~s~dg~~l~s~s~D 333 (340)
T 1got_B 293 NCNVWDALKADRAGVLAGHD---NRVSCLGVTDDGMAVATGSWD 333 (340)
T ss_dssp EEEEEETTTCCEEEEEECCS---SCEEEEEECTTSSCEEEEETT
T ss_pred eEEEEEcccCcEeeEeecCC---CcEEEEEEcCCCCEEEEEcCC
Confidence 2345665 22222222111 111234457999999998854
No 25
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.38 E-value=0.076 Score=54.61 Aligned_cols=133 Identities=14% Similarity=0.056 Sum_probs=70.7
Q ss_pred EEEEECCCCcEEeCcCC-----CcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCccccc-ccCcce
Q 048017 111 SVLYDIASNTFRPLLLQ-----TDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWD-RRWYAS 184 (566)
Q Consensus 111 ~~~yDp~t~~w~~l~~~-----~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~-~R~y~s 184 (566)
+.+||+.+++....... +.....+.++..+|++++.|+.. ..+.+||.. +.+... . +.. ...-.+
T Consensus 146 i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d---~~v~~~d~~---~~~~~~--~-~~~~~~~~~~ 216 (433)
T 3bws_A 146 MDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQA---NAVHVFDLK---TLAYKA--T-VDLTGKWSKI 216 (433)
T ss_dssp EEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGG---TEEEEEETT---TCCEEE--E-EECSSSSEEE
T ss_pred EEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCC---CEEEEEECC---CceEEE--E-EcCCCCCeeE
Confidence 77899998887653221 11111223445689999988753 578999987 433221 1 221 222223
Q ss_pred EEEecCCcEEEEcCccCCeEEEE-eCCCCCCCee-eeccccccCCCCCCCCccce-EEEecCCcEEEEEcC---------
Q 048017 185 NQILPDNRIIVVGGRRVFTYEFY-PKIDSLSSSL-YLRFLIETRDPGEENNLYPF-LHLLPDGNLFIFANR--------- 252 (566)
Q Consensus 185 ~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~-~~p~l~~~~d~~~~~~~yp~-~~~l~~G~Ifv~Gg~--------- 252 (566)
.+.-+||+.+++.+.....+.+| ..+. ... ..+. ...+. +...++|+.+++++.
T Consensus 217 ~~~~~~~~~l~~~~~~~~~i~~~d~~~~---~~~~~~~~-----------~~~~~~~~~~~~g~~l~~~~~~~~~~~~~d 282 (433)
T 3bws_A 217 LLYDPIRDLVYCSNWISEDISVIDRKTK---LEIRKTDK-----------IGLPRGLLLSKDGKELYIAQFSASNQESGG 282 (433)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTTT---EEEEECCC-----------CSEEEEEEECTTSSEEEEEEEESCTTCSCC
T ss_pred EEEcCCCCEEEEEecCCCcEEEEECCCC---cEEEEecC-----------CCCceEEEEcCCCCEEEEEECCCCccccCC
Confidence 44455776554444333456666 4332 111 1111 01122 234578876666552
Q ss_pred -eeEEEeccCCeEEE
Q 048017 253 -RSILFDYINNKLVK 266 (566)
Q Consensus 253 -~~e~yDp~t~~W~~ 266 (566)
...+||..+++...
T Consensus 283 g~i~~~d~~~~~~~~ 297 (433)
T 3bws_A 283 GRLGIYSMDKEKLID 297 (433)
T ss_dssp EEEEEEETTTTEEEE
T ss_pred CeEEEEECCCCcEEe
Confidence 45689998887653
No 26
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.37 E-value=0.025 Score=55.89 Aligned_cols=217 Identities=10% Similarity=-0.037 Sum_probs=118.3
Q ss_pred CCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEecCCcEEEEcCccCCeEEEE-eCCCCCCCeee
Q 048017 140 DGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILPDNRIIVVGGRRVFTYEFY-PKIDSLSSSLY 218 (566)
Q Consensus 140 dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~ 218 (566)
.|+++++|.. ...+.++|+.+. +-.|+.-.. .....+.+..++||++|+.+ ...+..| | +. ...|..
T Consensus 4 ~~~~lv~~~~---~~~v~~~d~~tG-~~~w~~~~~---~~~~~~~~~~~pdG~ilvs~---~~~V~~~d~-~G-~~~W~~ 71 (276)
T 3no2_A 4 PQHLLVGGSG---WNKIAIINKDTK-EIVWEYPLE---KGWECNSVAATKAGEILFSY---SKGAKMITR-DG-RELWNI 71 (276)
T ss_dssp CCEEEEECTT---CSEEEEEETTTT-EEEEEEECC---TTCCCCEEEECTTSCEEEEC---BSEEEEECT-TS-CEEEEE
T ss_pred CCcEEEeeCC---CCEEEEEECCCC-eEEEEeCCC---ccCCCcCeEECCCCCEEEeC---CCCEEEECC-CC-CEEEEE
Confidence 5688888764 368899999622 334764221 11235677888999999943 2345555 5 32 123442
Q ss_pred eccccccCCCCCCCCccceEEEecCCcEEEEEcC---eeEEEeccCCeEEEeecccCCCC--CCccCCCCceeeeccccc
Q 048017 219 LRFLIETRDPGEENNLYPFLHLLPDGNLFIFANR---RSILFDYINNKLVKEFPVIPGND--KRNYPSTGSSILLPVKLS 293 (566)
Q Consensus 219 ~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~---~~e~yDp~t~~W~~~~p~lp~~~--~r~~~~~g~avllpl~~~ 293 (566)
... .. .. -..+..++||++++.... .+..+|+... .....+ +.... +...+ .+.+. ++
T Consensus 72 ~~~-~~-------~~-~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk-~l~~~~-~~~~~~~~~~~~-~~v~~-~~---- 134 (276)
T 3no2_A 72 AAP-AG-------CE-MQTARILPDGNALVAWCGHPSTILEVNMKGE-VLSKTE-FETGIERPHAQF-RQINK-NK---- 134 (276)
T ss_dssp ECC-TT-------CE-EEEEEECTTSCEEEEEESTTEEEEEECTTSC-EEEEEE-ECCSCSSGGGSC-SCCEE-CT----
T ss_pred cCC-CC-------cc-ccccEECCCCCEEEEecCCCCEEEEEeCCCC-EEEEEe-ccCCCCcccccc-cCceE-CC----
Confidence 210 00 00 113446789999987543 4667788543 322232 11110 11111 12222 11
Q ss_pred CCCCCCCCCCCCCCEEEEEcCCCCCccccccccccccccCCeeEEEEeeCCCCCeEEeccCCCcccceeEEccCCeEEEE
Q 048017 294 AGSDGNGTAALPDAEVMVCGGAPAGAFIKSDKESVYVEASRTCGRLKVTDKYPVWSMEFMPMPRVMSDMLLLPSGDVIII 373 (566)
Q Consensus 294 ~~~~~~~y~~~~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~~M~~~R~~~~~vvLpdG~V~vv 373 (566)
+|.++++...+ ..+..+|+. .+..|+...-.. .+++..+++|+++|+
T Consensus 135 ------------~G~~lv~~~~~-----------------~~v~~~d~~-G~~~w~~~~~~~---~~~~~~~~~g~~~v~ 181 (276)
T 3no2_A 135 ------------KGNYLVPLFAT-----------------SEVREIAPN-GQLLNSVKLSGT---PFSSAFLDNGDCLVA 181 (276)
T ss_dssp ------------TSCEEEEETTT-----------------TEEEEECTT-SCEEEEEECSSC---CCEEEECTTSCEEEE
T ss_pred ------------CCCEEEEecCC-----------------CEEEEECCC-CCEEEEEECCCC---ccceeEcCCCCEEEE
Confidence 67777765432 346677765 356787652111 234567899999998
Q ss_pred cCCCCCCCCCccccCc---CCcEEeccC-CCCCCc-ceeEEEEcCCCcEEEecC
Q 048017 374 NGASNGTAGWEDAEEP---DRRFVVLNP-SKIPRM-YHSSAVVLPDGRILVGGS 422 (566)
Q Consensus 374 GG~~~g~~~~~~~ydP---t~~Wt~~~~-~~~~R~-yhs~a~LlpdG~V~v~GG 422 (566)
+... + ...++|| .-.|+.-.. ..-.|+ +.+.+.+++||.+||+..
T Consensus 182 ~~~~-~---~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 182 CGDA-H---CFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp CBTT-S---EEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred eCCC-C---eEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 7653 1 3457899 344665322 222233 445677789999999973
No 27
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.37 E-value=0.041 Score=55.03 Aligned_cols=149 Identities=13% Similarity=0.037 Sum_probs=75.9
Q ss_pred eEEEEECCCCcEEeCcCCCcccc-cCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCccccc-ccCcceEEE
Q 048017 110 HSVLYDIASNTFRPLLLQTDTWC-SSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWD-RRWYASNQI 187 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~~~~c-~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~-~R~y~s~~~ 187 (566)
.+..+|+++++++.+........ ...++-+||+||+++.. .....+.+||.. +.+++.+.. +.. ...-...+.
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~-~~~~~v~~~~~~---~g~~~~~~~-~~~~~~~p~~~a~ 93 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKE-DDEGGIAAWQID---GQTAHKLNT-VVAPGTPPAYVAV 93 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEE-TTEEEEEEEEEE---TTEEEEEEE-EEEESCCCSEEEE
T ss_pred EEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEec-CCCceEEEEEec---CCcEEEeee-eecCCCCCEEEEE
Confidence 46778999998877543211111 23445679997776532 123578889986 566655433 221 222223555
Q ss_pred ecCCcEEEEcCccCCeEEEE-eCCCCCCCeeeecccccc-CCC-CCCCCccce-EEEecCCcEEEEEc--CeeEEEecc-
Q 048017 188 LPDNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIET-RDP-GEENNLYPF-LHLLPDGNLFIFAN--RRSILFDYI- 260 (566)
Q Consensus 188 L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~-~d~-~~~~~~yp~-~~~l~~G~Ifv~Gg--~~~e~yDp~- 260 (566)
-+||+.+++.+.....+.+| ...+ ............ ... ......++. +...+||++|+.+. ....+||..
T Consensus 94 spdg~~l~~~~~~~~~v~v~~~~~~--g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~ 171 (347)
T 3hfq_A 94 DEARQLVYSANYHKGTAEVMKIAAD--GALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSD 171 (347)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECTT--SCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECT
T ss_pred CCCCCEEEEEeCCCCEEEEEEeCCC--CCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECC
Confidence 67898555555444556666 3221 111111100000 000 000011233 44568999777653 457889987
Q ss_pred CCeEE
Q 048017 261 NNKLV 265 (566)
Q Consensus 261 t~~W~ 265 (566)
+++..
T Consensus 172 ~g~~~ 176 (347)
T 3hfq_A 172 AGQLS 176 (347)
T ss_dssp TSCEE
T ss_pred CCcEE
Confidence 45543
No 28
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.34 E-value=0.094 Score=52.43 Aligned_cols=243 Identities=11% Similarity=0.075 Sum_probs=122.9
Q ss_pred EEEEECCCCcEEeCcC--CCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCccccc-ccCcceEEE
Q 048017 111 SVLYDIASNTFRPLLL--QTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWD-RRWYASNQI 187 (566)
Q Consensus 111 ~~~yDp~t~~w~~l~~--~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~-~R~y~s~~~ 187 (566)
+.+||..+.+...... .+.....+.....++.+++.|+.+ ..+++||.. +.+-.. . +.. ...-.+.+.
T Consensus 60 v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D---~~i~lWd~~---~~~~~~--~-~~~~~~~~~~~~~ 130 (321)
T 3ow8_A 60 VKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLD---AHIRLWDLE---NGKQIK--S-IDAGPVDAWTLAF 130 (321)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETT---SEEEEEETT---TTEEEE--E-EECCTTCCCCEEE
T ss_pred EEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCC---CcEEEEECC---CCCEEE--E-EeCCCccEEEEEE
Confidence 6677776665433211 111111223344688899998864 679999987 443221 1 111 111224556
Q ss_pred ecCCcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEcC--eeEEEeccCCeE
Q 048017 188 LPDNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANR--RSILFDYINNKL 264 (566)
Q Consensus 188 L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~--~~e~yDp~t~~W 264 (566)
-+||+.++.|+.++ .+.+| .... .. ... +.... ..--.+...++|+.++.|+. ...+||..+++-
T Consensus 131 spdg~~l~~g~~dg-~v~i~~~~~~---~~-~~~-~~~~~------~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~ 198 (321)
T 3ow8_A 131 SPDSQYLATGTHVG-KVNIFGVESG---KK-EYS-LDTRG------KFILSIAYSPDGKYLASGAIDGIINIFDIATGKL 198 (321)
T ss_dssp CTTSSEEEEECTTS-EEEEEETTTC---SE-EEE-EECSS------SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred CCCCCEEEEEcCCC-cEEEEEcCCC---ce-eEE-ecCCC------ceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcE
Confidence 67999999988653 45566 2221 11 111 10100 01112334579999998875 467899998875
Q ss_pred EEeecccCCCCCCccCCCCceeeecccccCCCCCCCCCCCCCCEEEEEcCCCCCccccccccccccccCCeeEEEEeeCC
Q 048017 265 VKEFPVIPGNDKRNYPSTGSSILLPVKLSAGSDGNGTAALPDAEVMVCGGAPAGAFIKSDKESVYVEASRTCGRLKVTDK 344 (566)
Q Consensus 265 ~~~~p~lp~~~~r~~~~~g~avllpl~~~~~~~~~~y~~~~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d~~~~ 344 (566)
.+.+ ... ..+- -.... . ++++++++|+.++ .+..+|+..
T Consensus 199 ~~~~---~~h---~~~v-~~l~~---s-------------pd~~~l~s~s~dg-----------------~i~iwd~~~- 237 (321)
T 3ow8_A 199 LHTL---EGH---AMPI-RSLTF---S-------------PDSQLLVTASDDG-----------------YIKIYDVQH- 237 (321)
T ss_dssp EEEE---CCC---SSCC-CEEEE---C-------------TTSCEEEEECTTS-----------------CEEEEETTT-
T ss_pred EEEE---ccc---CCce-eEEEE---c-------------CCCCEEEEEcCCC-----------------eEEEEECCC-
Confidence 5333 221 1110 11112 1 1678888888652 244455532
Q ss_pred CCCeEEe-ccCCCcccceeEEccCCeEEEEcCCCCCCCCCccccCc-CCcE-EeccCCCCCCcceeEEEEcCCCcEEEec
Q 048017 345 YPVWSME-FMPMPRVMSDMLLLPSGDVIIINGASNGTAGWEDAEEP-DRRF-VVLNPSKIPRMYHSSAVVLPDGRILVGG 421 (566)
Q Consensus 345 ~~~W~~~-~M~~~R~~~~~vvLpdG~V~vvGG~~~g~~~~~~~ydP-t~~W-t~~~~~~~~R~yhs~a~LlpdG~V~v~G 421 (566)
...... .-..... .+...-|+|+.++.|+.+ + ....||. +.+- ..+.. ....-......|||+.+++|
T Consensus 238 -~~~~~~~~~h~~~v-~~~~~sp~~~~l~s~s~D-~---~v~iwd~~~~~~~~~~~~---h~~~v~~v~~s~~g~~l~s~ 308 (321)
T 3ow8_A 238 -ANLAGTLSGHASWV-LNVAFCPDDTHFVSSSSD-K---SVKVWDVGTRTCVHTFFD---HQDQVWGVKYNGNGSKIVSV 308 (321)
T ss_dssp -CCEEEEECCCSSCE-EEEEECTTSSEEEEEETT-S---CEEEEETTTTEEEEEECC---CSSCEEEEEECTTSSEEEEE
T ss_pred -cceeEEEcCCCCce-EEEEECCCCCEEEEEeCC-C---cEEEEeCCCCEEEEEEcC---CCCcEEEEEECCCCCEEEEE
Confidence 121111 1111112 233456899999998876 3 1345665 2221 11111 11112234557999999988
Q ss_pred CCC
Q 048017 422 SNP 424 (566)
Q Consensus 422 G~~ 424 (566)
|..
T Consensus 309 ~~d 311 (321)
T 3ow8_A 309 GDD 311 (321)
T ss_dssp ETT
T ss_pred eCC
Confidence 853
No 29
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.23 E-value=0.08 Score=51.81 Aligned_cols=261 Identities=13% Similarity=0.113 Sum_probs=132.8
Q ss_pred EEEeeCCeEEEEeccCCCCCCCCCCCCccccCCCCCCCcccceEEEEECCCCcEEe----CcC-CCcccccCCeecCCCc
Q 048017 68 MQVLNNDKVIIFDRTDMGPSNLSLPIDKCRKEGDVGQLDCTAHSVLYDIASNTFRP----LLL-QTDTWCSSGAVLSDGT 142 (566)
Q Consensus 68 ~~~l~~gkV~~~gg~~~~~s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp~t~~w~~----l~~-~~~~~c~~~~~l~dG~ 142 (566)
...-++|++++.++ + + .+.+||..+++... +.. .+..........++|+
T Consensus 57 ~~~~~~~~~l~~~~-d-g------------------------~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 110 (337)
T 1gxr_A 57 VTISNPTRHVYTGG-K-G------------------------CVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGC 110 (337)
T ss_dssp EEECSSSSEEEEEC-B-S------------------------EEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSS
T ss_pred EEEecCCcEEEEcC-C-C------------------------eEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCC
Confidence 34446888888876 3 1 36788887654221 111 1122222345567899
Q ss_pred EEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccc-cCcceEEEecCCcEEEEcCccCCeEEEE-eCCCCCCCeeeec
Q 048017 143 LVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDR-RWYASNQILPDNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLR 220 (566)
Q Consensus 143 l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~-R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p 220 (566)
.+++|+.+ ..+.+||.. +.+...... +... ..-.+.+..++|+.+++|+.++ .+.+| ..+. ... ..
T Consensus 111 ~l~~~~~d---~~i~~~d~~---~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg-~v~~~d~~~~---~~~-~~ 178 (337)
T 1gxr_A 111 TLIVGGEA---STLSIWDLA---APTPRIKAE-LTSSAPACYALAISPDSKVCFSCCSDG-NIAVWDLHNQ---TLV-RQ 178 (337)
T ss_dssp EEEEEESS---SEEEEEECC---CC--EEEEE-EECSSSCEEEEEECTTSSEEEEEETTS-CEEEEETTTT---EEE-EE
T ss_pred EEEEEcCC---CcEEEEECC---CCCcceeee-cccCCCceEEEEECCCCCEEEEEeCCC-cEEEEeCCCC---cee-ee
Confidence 99988753 579999988 555333222 2222 1122345556899999888654 35566 3321 111 11
Q ss_pred cccccCCCCCCCCccceEEEecCCcEEEEEcC--eeEEEeccCCeEEEeecccCCCCCCccCCCCceeeecccccCCCCC
Q 048017 221 FLIETRDPGEENNLYPFLHLLPDGNLFIFANR--RSILFDYINNKLVKEFPVIPGNDKRNYPSTGSSILLPVKLSAGSDG 298 (566)
Q Consensus 221 ~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~--~~e~yDp~t~~W~~~~p~lp~~~~r~~~~~g~avllpl~~~~~~~~ 298 (566)
+.... ..--.+...++|+.++.++. ...+||.++.+-..... .+. .. ....+ .|
T Consensus 179 -~~~~~------~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~---~v----~~~~~---s~------ 234 (337)
T 1gxr_A 179 -FQGHT------DGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTS---QI----FSLGY---CP------ 234 (337)
T ss_dssp -ECCCS------SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSS---CE----EEEEE---CT------
T ss_pred -eeccc------CceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCC---ce----EEEEE---CC------
Confidence 11100 01112334568988888874 46789998887553321 111 00 01111 11
Q ss_pred CCCCCCCCCEEEEEcCCCCCccccccccccccccCCeeEEEEeeCCCCCeEEeccCCCcccceeEEccCCeEEEEcCCCC
Q 048017 299 NGTAALPDAEVMVCGGAPAGAFIKSDKESVYVEASRTCGRLKVTDKYPVWSMEFMPMPRVMSDMLLLPSGDVIIINGASN 378 (566)
Q Consensus 299 ~~y~~~~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~~M~~~R~~~~~vvLpdG~V~vvGG~~~ 378 (566)
+++.+++|+.+ ..+..+|+... ..... .-.... -......|+|+.+++++.+
T Consensus 235 -------~~~~l~~~~~~-----------------~~i~~~~~~~~-~~~~~-~~~~~~-v~~~~~~~~~~~l~~~~~d- 286 (337)
T 1gxr_A 235 -------TGEWLAVGMES-----------------SNVEVLHVNKP-DKYQL-HLHESC-VLSLKFAYCGKWFVSTGKD- 286 (337)
T ss_dssp -------TSSEEEEEETT-----------------SCEEEEETTSS-CEEEE-CCCSSC-EEEEEECTTSSEEEEEETT-
T ss_pred -------CCCEEEEEcCC-----------------CcEEEEECCCC-CeEEE-cCCccc-eeEEEECCCCCEEEEecCC-
Confidence 56777777654 23445565421 11111 111112 2234456899999988865
Q ss_pred CCCCCccccCc-CCcEEeccCCCCCCcceeEEEEcCCCcEEEecCCC
Q 048017 379 GTAGWEDAEEP-DRRFVVLNPSKIPRMYHSSAVVLPDGRILVGGSNP 424 (566)
Q Consensus 379 g~~~~~~~ydP-t~~Wt~~~~~~~~R~yhs~a~LlpdG~V~v~GG~~ 424 (566)
+ ....||. +.+-... ...... -....+.|||+.+++|+..
T Consensus 287 g---~i~~~~~~~~~~~~~--~~~~~~-v~~~~~s~~~~~l~~~~~d 327 (337)
T 1gxr_A 287 N---LLNAWRTPYGASIFQ--SKESSS-VLSCDISVDDKYIVTGSGD 327 (337)
T ss_dssp S---EEEEEETTTCCEEEE--EECSSC-EEEEEECTTSCEEEEEETT
T ss_pred C---cEEEEECCCCeEEEE--ecCCCc-EEEEEECCCCCEEEEecCC
Confidence 3 2345665 3222211 111111 2234567999999988853
No 30
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.21 E-value=0.19 Score=50.80 Aligned_cols=136 Identities=13% Similarity=0.162 Sum_probs=73.1
Q ss_pred eEEEEECCCCcEEeCcCCCcccccCCeecCCCcE-EEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEe
Q 048017 110 HSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTL-VQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQIL 188 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l-~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L 188 (566)
.+.+||..+++....-..... ..+.++.+||+. ++.|+.+ ..+++||.. +.+.... +.....-.+.+.-
T Consensus 13 ~v~v~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~d---~~i~v~d~~---~~~~~~~---~~~~~~v~~~~~s 82 (391)
T 1l0q_A 13 NISVIDVTSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHS---NDVSIIDTA---TNNVIAT---VPAGSSPQGVAVS 82 (391)
T ss_dssp EEEEEETTTTEEEEEEECSSS-EEEEEECTTSSEEEEEEGGG---TEEEEEETT---TTEEEEE---EECSSSEEEEEEC
T ss_pred EEEEEECCCCeEEEEeecCCC-cceEEECCCCCEEEEECCCC---CeEEEEECC---CCeEEEE---EECCCCccceEEC
Confidence 377888888765433221111 223455678874 4665432 579999987 5543321 3333333344555
Q ss_pred cCCcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccc-eEEEecCCc-EEEEEc--CeeEEEeccCCe
Q 048017 189 PDNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYP-FLHLLPDGN-LFIFAN--RRSILFDYINNK 263 (566)
Q Consensus 189 ~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp-~~~~l~~G~-Ifv~Gg--~~~e~yDp~t~~ 263 (566)
+||+.++++|.....+.+| ..+. .... .+... ..+ .+...++|+ ||+.+. ....+||..+++
T Consensus 83 pdg~~l~~~~~~~~~v~v~d~~~~---~~~~--~~~~~--------~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~ 149 (391)
T 1l0q_A 83 PDGKQVYVTNMASSTLSVIDTTSN---TVAG--TVKTG--------KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKA 149 (391)
T ss_dssp TTSSEEEEEETTTTEEEEEETTTT---EEEE--EEECS--------SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred CCCCEEEEEECCCCEEEEEECCCC---eEEE--EEeCC--------CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCc
Confidence 6888665555555567777 4432 1111 11110 112 233457887 556665 357889999888
Q ss_pred EEEee
Q 048017 264 LVKEF 268 (566)
Q Consensus 264 W~~~~ 268 (566)
....+
T Consensus 150 ~~~~~ 154 (391)
T 1l0q_A 150 VINTV 154 (391)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 76433
No 31
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=97.20 E-value=0.12 Score=51.99 Aligned_cols=157 Identities=9% Similarity=0.041 Sum_probs=90.3
Q ss_pred EEEeeCCeEEEEeccCCCCCCCCCCCCccccCCCCCCCcccceEEEEECCCCcEEeCc---CCCcccccCCeecCCCcEE
Q 048017 68 MQVLNNDKVIIFDRTDMGPSNLSLPIDKCRKEGDVGQLDCTAHSVLYDIASNTFRPLL---LQTDTWCSSGAVLSDGTLV 144 (566)
Q Consensus 68 ~~~l~~gkV~~~gg~~~~~s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~---~~~~~~c~~~~~l~dG~l~ 144 (566)
.+.-++|++++.|+.+ ..+.+||..+++|.... ..+.......+..+||+.+
T Consensus 22 l~~sp~g~~las~~~D-------------------------~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l 76 (345)
T 3fm0_A 22 LAWNPAGTLLASCGGD-------------------------RRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYL 76 (345)
T ss_dssp EEECTTSSCEEEEETT-------------------------SCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEE
T ss_pred EEECCCCCEEEEEcCC-------------------------CeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEE
Confidence 3444688888888754 13678998888775332 1222223334556799999
Q ss_pred EEcCCCCCCCeEEEEcCCCCCCCcccccCccccc-ccCcceEEEecCCcEEEEcCccCCeEEEE-eCCCCCCCeeeeccc
Q 048017 145 QTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWD-RRWYASNQILPDNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFL 222 (566)
Q Consensus 145 vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~-~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l 222 (566)
++|+.+ ..+++||.. +.++..... +.. ...-.+++.-+||+.++.|+.++ ++.+| .... ........+
T Consensus 77 ~s~s~D---~~v~iw~~~---~~~~~~~~~-~~~h~~~v~~v~~sp~~~~l~s~s~D~-~v~iwd~~~~--~~~~~~~~~ 146 (345)
T 3fm0_A 77 ASASFD---ATTCIWKKN---QDDFECVTT-LEGHENEVKSVAWAPSGNLLATCSRDK-SVWVWEVDEE--DEYECVSVL 146 (345)
T ss_dssp EEEETT---SCEEEEEEC---CC-EEEEEE-ECCCSSCEEEEEECTTSSEEEEEETTS-CEEEEEECTT--SCEEEEEEE
T ss_pred EEEECC---CcEEEEEcc---CCCeEEEEE-ccCCCCCceEEEEeCCCCEEEEEECCC-eEEEEECCCC--CCeEEEEEe
Confidence 999864 467888876 555443322 321 12223444557899999988764 45566 3321 122222212
Q ss_pred cccCCCCCCCCccceEEEecCCcEEEEEcC--eeEEEeccCCeEE
Q 048017 223 IETRDPGEENNLYPFLHLLPDGNLFIFANR--RSILFDYINNKLV 265 (566)
Q Consensus 223 ~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~--~~e~yDp~t~~W~ 265 (566)
..... .--.+...++|++++.|+. ...+||..+++|.
T Consensus 147 ~~h~~------~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~ 185 (345)
T 3fm0_A 147 NSHTQ------DVKHVVWHPSQELLASASYDDTVKLYREEEDDWV 185 (345)
T ss_dssp CCCCS------CEEEEEECSSSSCEEEEETTSCEEEEEEETTEEE
T ss_pred cCcCC------CeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEE
Confidence 11110 0112233578998888874 4678999988876
No 32
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.18 E-value=0.12 Score=52.23 Aligned_cols=251 Identities=15% Similarity=0.175 Sum_probs=121.8
Q ss_pred eEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCccccc-ccCcceEEEe
Q 048017 110 HSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWD-RRWYASNQIL 188 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~-~R~y~s~~~L 188 (566)
.+.+||..+.+....-..+..+-...+..++|..+++||.+ ..+.+|+...+...........+.. ...-.++...
T Consensus 87 ~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d---~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 163 (354)
T 2pbi_B 87 KVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLD---NKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFT 163 (354)
T ss_dssp EEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTT---SEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEEC
T ss_pred eEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCC---CCEEEEEEeccccccccccceeeeccCCcEEEEEEe
Confidence 37789987776543322222232334566899999999975 5788887652100011111110111 1111233444
Q ss_pred cCCcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceEEEec--CCcEEEEEcC--eeEEEeccCCe
Q 048017 189 PDNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLP--DGNLFIFANR--RSILFDYINNK 263 (566)
Q Consensus 189 ~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~--~G~Ifv~Gg~--~~e~yDp~t~~ 263 (566)
++++.++.|+.+ .++.+| ..+. ... .. +..... .. -.....+ +|++++.|+. .+.+||..+++
T Consensus 164 ~~~~~l~t~s~D-~~v~lwd~~~~---~~~-~~-~~~h~~-----~v-~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~ 231 (354)
T 2pbi_B 164 NSDMQILTASGD-GTCALWDVESG---QLL-QS-FHGHGA-----DV-LCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQ 231 (354)
T ss_dssp SSSSEEEEEETT-SEEEEEETTTC---CEE-EE-EECCSS-----CE-EEEEECCCSSCCEEEEEETTSCEEEEETTTCC
T ss_pred CCCCEEEEEeCC-CcEEEEeCCCC---eEE-EE-EcCCCC-----Ce-EEEEEEeCCCCCEEEEEeCCCeEEEEECCCCc
Confidence 577777777655 456666 3321 111 11 111000 00 0112223 5788888875 46789999887
Q ss_pred EEEeecccCCCCCCccCCCCceeeecccccCCCCCCCCCCCCCCEEEEEcCCCCCccccccccccccccCCeeEEEEeeC
Q 048017 264 LVKEFPVIPGNDKRNYPSTGSSILLPVKLSAGSDGNGTAALPDAEVMVCGGAPAGAFIKSDKESVYVEASRTCGRLKVTD 343 (566)
Q Consensus 264 W~~~~p~lp~~~~r~~~~~g~avllpl~~~~~~~~~~y~~~~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d~~~ 343 (566)
..+.+ ... ... ..+....| +++.++.|+.+ .++..+|+..
T Consensus 232 ~~~~~---~~h--~~~--v~~v~~~p----------------~~~~l~s~s~D-----------------~~v~lwd~~~ 271 (354)
T 2pbi_B 232 CVQAF---ETH--ESD--VNSVRYYP----------------SGDAFASGSDD-----------------ATCRLYDLRA 271 (354)
T ss_dssp EEEEE---CCC--SSC--EEEEEECT----------------TSSEEEEEETT-----------------SCEEEEETTT
T ss_pred EEEEe---cCC--CCC--eEEEEEeC----------------CCCEEEEEeCC-----------------CeEEEEECCC
Confidence 65433 221 110 01111211 56777888765 2344555542
Q ss_pred CCCCeEEe-ccCCCccc-ceeEEccCCeEEEEcCCCCCCCCCccccCc--CCcEEeccCCCCCCcceeEEEEcCCCcEEE
Q 048017 344 KYPVWSME-FMPMPRVM-SDMLLLPSGDVIIINGASNGTAGWEDAEEP--DRRFVVLNPSKIPRMYHSSAVVLPDGRILV 419 (566)
Q Consensus 344 ~~~~W~~~-~M~~~R~~-~~~vvLpdG~V~vvGG~~~g~~~~~~~ydP--t~~Wt~~~~~~~~R~yhs~a~LlpdG~V~v 419 (566)
.+-... ........ .....-|+|+++++|+.+ + ....||. ...-..+.. -...-.....-|||+.++
T Consensus 272 --~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d-~---~i~vwd~~~~~~~~~l~~---h~~~v~~l~~spdg~~l~ 342 (354)
T 2pbi_B 272 --DREVAIYSKESIIFGASSVDFSLSGRLLFAGYND-Y---TINVWDVLKGSRVSILFG---HENRVSTLRVSPDGTAFC 342 (354)
T ss_dssp --TEEEEEECCTTCCSCEEEEEECTTSSEEEEEETT-S---CEEEEETTTCSEEEEECC---CSSCEEEEEECTTSSCEE
T ss_pred --CcEEEEEcCCCcccceeEEEEeCCCCEEEEEECC-C---cEEEEECCCCceEEEEEC---CCCcEEEEEECCCCCEEE
Confidence 111111 11111111 122345799999998865 2 2345665 222222211 112223455679999999
Q ss_pred ecCCC
Q 048017 420 GGSNP 424 (566)
Q Consensus 420 ~GG~~ 424 (566)
+|+..
T Consensus 343 sgs~D 347 (354)
T 2pbi_B 343 SGSWD 347 (354)
T ss_dssp EEETT
T ss_pred EEcCC
Confidence 99864
No 33
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.15 E-value=0.2 Score=48.28 Aligned_cols=241 Identities=14% Similarity=0.036 Sum_probs=117.8
Q ss_pred EEEEECCCCcEEeCcCCCc-ccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccc-cccCcceEEEe
Q 048017 111 SVLYDIASNTFRPLLLQTD-TWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLW-DRRWYASNQIL 188 (566)
Q Consensus 111 ~~~yDp~t~~w~~l~~~~~-~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~-~~R~y~s~~~L 188 (566)
+..||+. ++++....... ....+.++..+|++|+.... ...+..||+. .++.... +. ....-.+.+.-
T Consensus 43 v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~v~~~d~~----g~~~~~~--~~~~~~~~~~i~~~ 112 (300)
T 2qc5_A 43 ISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENG---ANKIGKLSKK----GGFTEYP--LPQPDSGPYGITEG 112 (300)
T ss_dssp EEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETT---TTEEEEECTT----SCEEEEE--CSSTTCCEEEEEEC
T ss_pred EEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecC---CCeEEEECCC----CCeEEec--CCCCCCCCccceEC
Confidence 6678887 76665432211 12223344568999987542 3568899986 2333221 11 11222344444
Q ss_pred cCCcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceEEE-ecCCcEEEEE--cCeeEEEeccCCeE
Q 048017 189 PDNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHL-LPDGNLFIFA--NRRSILFDYINNKL 264 (566)
Q Consensus 189 ~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~-l~~G~Ifv~G--g~~~e~yDp~t~~W 264 (566)
++|++|+..... ..+..| +. . ........ . ....|...+ .++|+||+.. +....+||+ +++.
T Consensus 113 ~~g~l~v~~~~~-~~i~~~~~~-g---~~~~~~~~-~-------~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~ 178 (300)
T 2qc5_A 113 LNGDIWFTQLNG-DRIGKLTAD-G---TIYEYDLP-N-------KGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKL 178 (300)
T ss_dssp STTCEEEEETTT-TEEEEECTT-S---CEEEEECS-S-------TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCE
T ss_pred CCCCEEEEccCC-CeEEEECCC-C---CEEEccCC-C-------CCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcE
Confidence 689999875432 234445 43 2 22211111 0 012344433 3689998876 346788999 5665
Q ss_pred EEeecccCCCCCCccCCCCceeeecccccCCCCCCCCCCCCCCEEEEEcCCCCCccccccccccccccCCeeEEEEeeCC
Q 048017 265 VKEFPVIPGNDKRNYPSTGSSILLPVKLSAGSDGNGTAALPDAEVMVCGGAPAGAFIKSDKESVYVEASRTCGRLKVTDK 344 (566)
Q Consensus 265 ~~~~p~lp~~~~r~~~~~g~avllpl~~~~~~~~~~y~~~~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d~~~~ 344 (566)
.. .. ++.. ...+. .+.+ . .+++||++.... ..+.++|+.
T Consensus 179 ~~-~~-~~~~--~~~~~---~i~~--d-------------~~g~l~v~~~~~-----------------~~i~~~~~~-- 217 (300)
T 2qc5_A 179 EE-YP-LPTN--AAAPV---GITS--G-------------NDGALWFVEIMG-----------------NKIGRITTT-- 217 (300)
T ss_dssp EE-EE-CSST--TCCEE---EEEE--C-------------TTSSEEEEETTT-----------------TEEEEECTT--
T ss_pred EE-ee-CCCC--CCCcc---eEEE--C-------------CCCCEEEEccCC-----------------CEEEEEcCC--
Confidence 52 32 2221 11111 1111 1 057788864321 234556542
Q ss_pred CCCeEEeccCCCcc-cceeEEccCCeEEEEcCCCCCCCCCccccCcCCcEEeccCCCCCCcceeEEEEcCCCcEEEecC
Q 048017 345 YPVWSMEFMPMPRV-MSDMLLLPSGDVIIINGASNGTAGWEDAEEPDRRFVVLNPSKIPRMYHSSAVVLPDGRILVGGS 422 (566)
Q Consensus 345 ~~~W~~~~M~~~R~-~~~~vvLpdG~V~vvGG~~~g~~~~~~~ydPt~~Wt~~~~~~~~R~yhs~a~LlpdG~V~v~GG 422 (566)
.++....++..-. -.+.++-++|+||+..... + ....|||+.++...........-++ ..+.+||++|++..
T Consensus 218 -g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~-~---~i~~~~~~g~~~~~~~~~~~~~~~~-i~~~~~g~l~v~~~ 290 (300)
T 2qc5_A 218 -GEISEYDIPTPNARPHAITAGKNSEIWFTEWGA-N---QIGRITNDNTIQEYQLQTENAEPHG-ITFGKDGSVWFALK 290 (300)
T ss_dssp -CCEEEEECSSTTCCEEEEEECSTTCEEEEETTT-T---EEEEECTTSCEEEEECCSTTCCCCC-EEECTTSCEEEECS
T ss_pred -CcEEEEECCCCCCCceEEEECCCCCEEEeccCC-C---eEEEECCCCcEEEEECCccCCccce-eEeCCCCCEEEEcc
Confidence 3333322221111 1233455789999976332 1 1346788445554321111111233 34568999998865
No 34
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.13 E-value=0.12 Score=51.57 Aligned_cols=262 Identities=13% Similarity=0.098 Sum_probs=120.8
Q ss_pred EEEEECCCCcEEeCcCC----CcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCC--CCcccccCcccc-cccCcc
Q 048017 111 SVLYDIASNTFRPLLLQ----TDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDE--GCDWVELSKNLW-DRRWYA 183 (566)
Q Consensus 111 ~~~yDp~t~~w~~l~~~----~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~--t~~W~~~~~~M~-~~R~y~ 183 (566)
+.+||..++.++..... +.....+...-++|+++++|+.+ ..+++||..... ..++..... +. ....-.
T Consensus 36 i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D---~~v~iw~~~~~~~~~~~~~~~~~-~~~h~~~V~ 111 (330)
T 2hes_X 36 IKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFD---STVSIWAKEESADRTFEMDLLAI-IEGHENEVK 111 (330)
T ss_dssp EEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETT---SCEEEEEC-------CCCEEEEE-EC----CEE
T ss_pred EEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCC---CcEEEEEcccCcCccccceeEEE-EcCCCCcEE
Confidence 67888877654433211 22222233455789999999864 568889875100 012222211 21 111122
Q ss_pred eEEEecCCcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEcC--eeEEEecc
Q 048017 184 SNQILPDNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANR--RSILFDYI 260 (566)
Q Consensus 184 s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~--~~e~yDp~ 260 (566)
+++.-+||+.++.|+.+. ++.+| .... ...+.....+..... .--.+...++|++++.|+. ...+||..
T Consensus 112 ~v~~sp~g~~las~s~D~-~v~iwd~~~~-~~~~~~~~~~~~h~~------~v~~v~~~p~~~~l~s~s~D~~i~iW~~~ 183 (330)
T 2hes_X 112 GVAWSNDGYYLATCSRDK-SVWIWETDES-GEEYECISVLQEHSQ------DVKHVIWHPSEALLASSSYDDTVRIWKDY 183 (330)
T ss_dssp EEEECTTSCEEEEEETTS-CEEEEECCTT-CCCCEEEEEECCCSS------CEEEEEECSSSSEEEEEETTSCEEEEEEE
T ss_pred EEEECCCCCEEEEEeCCC-EEEEEeccCC-CCCeEEEEEeccCCC------ceEEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 344456899988888764 45666 3221 112222211211110 0011223478999988875 46788888
Q ss_pred CCeEEEeecccCCCCCCccCCCCceeeecccccCCCCCCCCCCCCCCEEEEEcCCCCCccccccccccccccCCeeEEEE
Q 048017 261 NNKLVKEFPVIPGNDKRNYPSTGSSILLPVKLSAGSDGNGTAALPDAEVMVCGGAPAGAFIKSDKESVYVEASRTCGRLK 340 (566)
Q Consensus 261 t~~W~~~~p~lp~~~~r~~~~~g~avllpl~~~~~~~~~~y~~~~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d 340 (566)
++.|. .+..+.... +...-+...|. . .+..++.|+.+. ++..+|
T Consensus 184 ~~~~~-~~~~~~~h~-------~~v~~~~~~~~--------~---~~~~l~s~s~D~-----------------~v~iw~ 227 (330)
T 2hes_X 184 DDDWE-CVAVLNGHE-------GTVWSSDFDKT--------E---GVFRLCSGSDDS-----------------TVRVWK 227 (330)
T ss_dssp TTEEE-EEEEECCCS-------SCEEEEEECCS--------S---SSCEEEEEETTS-----------------CEEEEE
T ss_pred CCCee-EEEEccCCC-------CcEEEEEecCC--------C---CeeEEEEEeCCC-----------------eEEEEE
Confidence 87765 343333321 11111111110 0 256677777642 233444
Q ss_pred eeCC----CCCeEEe-ccCC-CcccceeEEccCCeEEEEcCCCCCCCCCccccCc-CCcEEeccCCCCCCc--ceeEEEE
Q 048017 341 VTDK----YPVWSME-FMPM-PRVMSDMLLLPSGDVIIINGASNGTAGWEDAEEP-DRRFVVLNPSKIPRM--YHSSAVV 411 (566)
Q Consensus 341 ~~~~----~~~W~~~-~M~~-~R~~~~~vvLpdG~V~vvGG~~~g~~~~~~~ydP-t~~Wt~~~~~~~~R~--yhs~a~L 411 (566)
+... ...|... .++. .......+...++.+++.||.+ + ....||. +.+|..+........ .-.....
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~d-g---~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~ 303 (330)
T 2hes_X 228 YMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGAD-G---VLAVYEEVDGEWKVFAKRALCHGVYEINVVKW 303 (330)
T ss_dssp EEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETT-S---CEEEEEEETTEEEEEEEESCTTTTSCEEEEEE
T ss_pred ecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCC-C---EEEEEEcCCCceEEEeccccccccceEEEEEE
Confidence 4321 1235443 3321 1111222333344466777765 3 2346777 666755432211111 1122334
Q ss_pred cC--CCcEEEecCCC
Q 048017 412 LP--DGRILVGGSNP 424 (566)
Q Consensus 412 lp--dG~V~v~GG~~ 424 (566)
.| ||++++.||..
T Consensus 304 ~~~~~~~~las~s~D 318 (330)
T 2hes_X 304 LELNGKTILATGGDD 318 (330)
T ss_dssp C-----CCEEEEETT
T ss_pred ecCCCceEEEEecCC
Confidence 56 79999998864
No 35
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.11 E-value=0.065 Score=52.92 Aligned_cols=149 Identities=10% Similarity=0.101 Sum_probs=82.4
Q ss_pred EeeCCeEEEEeccCCCCCCCCCCCCccccCCCCCCCcccceEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCC
Q 048017 70 VLNNDKVIIFDRTDMGPSNLSLPIDKCRKEGDVGQLDCTAHSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGY 149 (566)
Q Consensus 70 ~l~~gkV~~~gg~~~~~s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~ 149 (566)
.-++|+.++.++.+ ..+.+||..+++-...-..+........+.++|+++++|+.
T Consensus 21 fsp~~~~l~s~~~d-------------------------g~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~ 75 (304)
T 2ynn_A 21 FHPTEPWVLTTLYS-------------------------GRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSD 75 (304)
T ss_dssp ECSSSSEEEEEETT-------------------------SEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEET
T ss_pred ECCCCCEEEEEcCC-------------------------CcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECC
Confidence 33688888887753 13778999887643221122222233456679999999986
Q ss_pred CCCCCeEEEEcCCCCCCCcccccCcccc-cccCcceEEEecCCcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCC
Q 048017 150 NVGDRVIRLFTPCNDEGCDWVELSKNLW-DRRWYASNQILPDNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRD 227 (566)
Q Consensus 150 ~~g~~~v~~ydP~~~~t~~W~~~~~~M~-~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d 227 (566)
+ ..+++||.. +.+- +.. +. ....-.+.+.-++++.++.|+.++ ++.+| ..+ .+.....+.....
T Consensus 76 d---~~i~vwd~~---~~~~--~~~-~~~h~~~v~~~~~~~~~~~l~sgs~D~-~v~lWd~~~----~~~~~~~~~~h~~ 141 (304)
T 2ynn_A 76 D---FRIRVFNYN---TGEK--VVD-FEAHPDYIRSIAVHPTKPYVLSGSDDL-TVKLWNWEN----NWALEQTFEGHEH 141 (304)
T ss_dssp T---SEEEEEETT---TCCE--EEE-EECCSSCEEEEEECSSSSEEEEEETTS-CEEEEEGGG----TTEEEEEECCCCS
T ss_pred C---CEEEEEECC---CCcE--EEE-EeCCCCcEEEEEEcCCCCEEEEECCCC-eEEEEECCC----CcchhhhhcccCC
Confidence 4 679999987 4332 111 22 222233455567899888888663 45666 322 1211111111100
Q ss_pred CCCCCCccceEEEec-CCcEEEEEcC--eeEEEeccCCe
Q 048017 228 PGEENNLYPFLHLLP-DGNLFIFANR--RSILFDYINNK 263 (566)
Q Consensus 228 ~~~~~~~yp~~~~l~-~G~Ifv~Gg~--~~e~yDp~t~~ 263 (566)
.-..+...| ++++++.|+. .+.+||..+.+
T Consensus 142 ------~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~ 174 (304)
T 2ynn_A 142 ------FVMCVAFNPKDPSTFASGCLDRTVKVWSLGQST 174 (304)
T ss_dssp ------CEEEEEECTTCTTEEEEEETTSEEEEEETTCSS
T ss_pred ------cEEEEEECCCCCCEEEEEeCCCeEEEEECCCCC
Confidence 001122234 6788888875 46778886543
No 36
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.10 E-value=0.22 Score=47.92 Aligned_cols=240 Identities=13% Similarity=0.007 Sum_probs=116.8
Q ss_pred EEEEECCCCcEEeCcCC-CcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccc-cccCcceEEEe
Q 048017 111 SVLYDIASNTFRPLLLQ-TDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLW-DRRWYASNQIL 188 (566)
Q Consensus 111 ~~~yDp~t~~w~~l~~~-~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~-~~R~y~s~~~L 188 (566)
+..||+. ++++..... ......+.++-.+|++++.... ...+..||+. .++.... ++ ....-.+.+.-
T Consensus 38 v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~i~~~~~~----g~~~~~~--~~~~~~~~~~i~~~ 107 (299)
T 2z2n_A 38 ISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENA---ANKIGRITKK----GIIKEYT--LPNPDSAPYGITEG 107 (299)
T ss_dssp EEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETT---TTEEEEECTT----SCEEEEE--CSSTTCCEEEEEEC
T ss_pred EEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCC---CCeEEEECCC----CcEEEEe--CCCcCCCceeeEEC
Confidence 6778888 777654422 1112223344468999988542 2468889986 2333222 11 11222334445
Q ss_pred cCCcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceE-EEecCCcEEEEEc--CeeEEEeccCCeE
Q 048017 189 PDNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFL-HLLPDGNLFIFAN--RRSILFDYINNKL 264 (566)
Q Consensus 189 ~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~-~~l~~G~Ifv~Gg--~~~e~yDp~t~~W 264 (566)
++|++|+..... ..+.+| + +. ........ . ....|.. ...++|+||+... ....+||+ +++.
T Consensus 108 ~~g~l~v~~~~~-~~i~~~d~-~g---~~~~~~~~-~-------~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~ 173 (299)
T 2z2n_A 108 PNGDIWFTEMNG-NRIGRITD-DG---KIREYELP-N-------KGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDI 173 (299)
T ss_dssp TTSCEEEEETTT-TEEEEECT-TC---CEEEEECS-S-------TTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCE
T ss_pred CCCCEEEEecCC-ceEEEECC-CC---CEEEecCC-C-------CCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcE
Confidence 689999875432 234455 4 21 22211110 0 0123333 3346899998763 46788999 6666
Q ss_pred EEeecccCCCCCCccCCCCceeeecccccCCCCCCCCCCCCCCEEEEEcCCCCCccccccccccccccCCeeEEEEeeCC
Q 048017 265 VKEFPVIPGNDKRNYPSTGSSILLPVKLSAGSDGNGTAALPDAEVMVCGGAPAGAFIKSDKESVYVEASRTCGRLKVTDK 344 (566)
Q Consensus 265 ~~~~p~lp~~~~r~~~~~g~avllpl~~~~~~~~~~y~~~~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d~~~~ 344 (566)
.. .+ ++.. -..+. +..+ . .+++||+..... ..+.++|+ .
T Consensus 174 ~~-~~-~~~~--~~~~~---~i~~--~-------------~~g~l~v~~~~~-----------------~~i~~~~~-~- 212 (299)
T 2z2n_A 174 TE-FK-IPTP--ASGPV---GITK--G-------------NDDALWFVEIIG-----------------NKIGRITT-S- 212 (299)
T ss_dssp EE-EE-CSST--TCCEE---EEEE--C-------------TTSSEEEEETTT-----------------TEEEEECT-T-
T ss_pred EE-ee-CCCC--CCcce---eEEE--C-------------CCCCEEEEccCC-----------------ceEEEECC-C-
Confidence 52 31 2211 11111 1111 1 057788865321 23455655 1
Q ss_pred CCCeEEeccCCCccc-ceeEEccCCeEEEEcCCCCCCCCCccccCcCCcEEeccCCCCCCcceeEEEEcCCCcEEEecC
Q 048017 345 YPVWSMEFMPMPRVM-SDMLLLPSGDVIIINGASNGTAGWEDAEEPDRRFVVLNPSKIPRMYHSSAVVLPDGRILVGGS 422 (566)
Q Consensus 345 ~~~W~~~~M~~~R~~-~~~vvLpdG~V~vvGG~~~g~~~~~~~ydPt~~Wt~~~~~~~~R~yhs~a~LlpdG~V~v~GG 422 (566)
.++....++..... .+.++-++|+||+..... + ....|||..+............-++.++ ++|++|++..
T Consensus 213 -g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~-~---~i~~~d~~g~~~~~~~~~~~~~~~~i~~--~~g~l~v~~~ 284 (299)
T 2z2n_A 213 -GEITEFKIPTPNARPHAITAGAGIDLWFTEWGA-N---KIGRLTSNNIIEEYPIQIKSAEPHGICF--DGETIWFAME 284 (299)
T ss_dssp -CCEEEEECSSTTCCEEEEEECSTTCEEEEETTT-T---EEEEEETTTEEEEEECSSSSCCEEEEEE--CSSCEEEEET
T ss_pred -CcEEEEECCCCCCCceeEEECCCCCEEEeccCC-c---eEEEECCCCceEEEeCCCCCCccceEEe--cCCCEEEEec
Confidence 33333222211111 233455789999876322 1 1346777444444321111122233444 9999999864
No 37
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.02 E-value=0.091 Score=51.37 Aligned_cols=221 Identities=16% Similarity=0.181 Sum_probs=111.8
Q ss_pred CeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCccc-ccCccc---ccccCcceEEEecCCcEEEEcCccCCeEEEE-eC
Q 048017 135 GAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWV-ELSKNL---WDRRWYASNQILPDNRIIVVGGRRVFTYEFY-PK 209 (566)
Q Consensus 135 ~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~-~~~~~M---~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~ 209 (566)
....++|+++++|+ + ..+++||.. +.+.. .... + .....-.+.+..+||+.+++|+.++ .+.+| ..
T Consensus 57 ~~~~~~~~~l~~~~-d---g~i~iw~~~---~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~i~~~d~~ 127 (337)
T 1gxr_A 57 VTISNPTRHVYTGG-K---GCVKVWDIS---HPGNKSPVSQ-LDCLNRDNYIRSCKLLPDGCTLIVGGEAS-TLSIWDLA 127 (337)
T ss_dssp EEECSSSSEEEEEC-B---SEEEEEETT---STTCCSCSEE-EECSCTTSBEEEEEECTTSSEEEEEESSS-EEEEEECC
T ss_pred EEEecCCcEEEEcC-C---CeEEEEECC---CCCceeeeec-ccccCCCCcEEEEEEcCCCCEEEEEcCCC-cEEEEECC
Confidence 34557899999988 3 578999987 33221 1111 1 1222233455567899888887653 56666 33
Q ss_pred CCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEcC--eeEEEeccCCeEEEeecccCCCCCCccCCCCceee
Q 048017 210 IDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANR--RSILFDYINNKLVKEFPVIPGNDKRNYPSTGSSIL 287 (566)
Q Consensus 210 ~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~--~~e~yDp~t~~W~~~~p~lp~~~~r~~~~~g~avl 287 (566)
+. .......+..... .--.+...++|+.++.|+. ...+||..+++....+ ... .. ...-
T Consensus 128 ~~---~~~~~~~~~~~~~------~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~---~~~--~~-----~i~~ 188 (337)
T 1gxr_A 128 AP---TPRIKAELTSSAP------ACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF---QGH--TD-----GASC 188 (337)
T ss_dssp CC-----EEEEEEECSSS------CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE---CCC--SS-----CEEE
T ss_pred CC---CcceeeecccCCC------ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeee---ecc--cC-----ceEE
Confidence 32 2111111111100 0112334568988888874 4788999988765433 221 11 1111
Q ss_pred ecccccCCCCCCCCCCCCCCEEEEEcCCCCCccccccccccccccCCeeEEEEeeCCCCCeEEeccCCCcccceeEEccC
Q 048017 288 LPVKLSAGSDGNGTAALPDAEVMVCGGAPAGAFIKSDKESVYVEASRTCGRLKVTDKYPVWSMEFMPMPRVMSDMLLLPS 367 (566)
Q Consensus 288 lpl~~~~~~~~~~y~~~~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~~M~~~R~~~~~vvLpd 367 (566)
+...| +++.+++|+.+ ..+..+|+.. .+-.. .......-......|+
T Consensus 189 ~~~~~-------------~~~~l~~~~~d-----------------g~i~~~d~~~--~~~~~-~~~~~~~v~~~~~s~~ 235 (337)
T 1gxr_A 189 IDISN-------------DGTKLWTGGLD-----------------NTVRSWDLRE--GRQLQ-QHDFTSQIFSLGYCPT 235 (337)
T ss_dssp EEECT-------------TSSEEEEEETT-----------------SEEEEEETTT--TEEEE-EEECSSCEEEEEECTT
T ss_pred EEECC-------------CCCEEEEEecC-----------------CcEEEEECCC--CceEe-eecCCCceEEEEECCC
Confidence 11111 56667777654 2345566542 11111 1111111223345689
Q ss_pred CeEEEEcCCCCCCCCCccccCc-CCcEEeccCCCCCCcceeEEEEcCCCcEEEecCC
Q 048017 368 GDVIIINGASNGTAGWEDAEEP-DRRFVVLNPSKIPRMYHSSAVVLPDGRILVGGSN 423 (566)
Q Consensus 368 G~V~vvGG~~~g~~~~~~~ydP-t~~Wt~~~~~~~~R~yhs~a~LlpdG~V~v~GG~ 423 (566)
|+.+++|+.+ + ....||. +.+-..+... ...-......|||+.+++|+.
T Consensus 236 ~~~l~~~~~~-~---~i~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~ 285 (337)
T 1gxr_A 236 GEWLAVGMES-S---NVEVLHVNKPDKYQLHLH---ESCVLSLKFAYCGKWFVSTGK 285 (337)
T ss_dssp SSEEEEEETT-S---CEEEEETTSSCEEEECCC---SSCEEEEEECTTSSEEEEEET
T ss_pred CCEEEEEcCC-C---cEEEEECCCCCeEEEcCC---ccceeEEEECCCCCEEEEecC
Confidence 9999998765 2 2345666 3222222111 111233456799999998885
No 38
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.96 E-value=0.2 Score=51.05 Aligned_cols=88 Identities=10% Similarity=0.056 Sum_probs=52.9
Q ss_pred eEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccc-cccCcceEEEe
Q 048017 110 HSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLW-DRRWYASNQIL 188 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~-~~R~y~s~~~L 188 (566)
.+.+||..+++-...-..+..........++|+++++|+.+ ..+++||.. +.+- ... +. ....-.+++..
T Consensus 120 ~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d---~~i~iwd~~---~~~~--~~~-~~~h~~~v~~~~~~ 190 (420)
T 3vl1_A 120 DIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQD---MQLKIWSVK---DGSN--PRT-LIGHRATVTDIAII 190 (420)
T ss_dssp CEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETT---SEEEEEETT---TCCC--CEE-EECCSSCEEEEEEE
T ss_pred CEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCC---CeEEEEeCC---CCcC--ceE-EcCCCCcEEEEEEc
Confidence 37789988776654432333333344556799999998864 579999987 3321 111 22 12222345556
Q ss_pred cCCcEEEEcCccCCeEEEE
Q 048017 189 PDNRIIVVGGRRVFTYEFY 207 (566)
Q Consensus 189 ~dG~VyvvGG~~~~s~E~y 207 (566)
+||+.++.|+.++ .+.+|
T Consensus 191 ~~~~~l~s~~~d~-~v~iw 208 (420)
T 3vl1_A 191 DRGRNVLSASLDG-TIRLW 208 (420)
T ss_dssp TTTTEEEEEETTS-CEEEE
T ss_pred CCCCEEEEEcCCC-cEEEe
Confidence 7899988888764 34455
No 39
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.94 E-value=0.19 Score=51.96 Aligned_cols=134 Identities=15% Similarity=0.190 Sum_probs=73.3
Q ss_pred EEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCccccc-ccCcceEEEec
Q 048017 111 SVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWD-RRWYASNQILP 189 (566)
Q Consensus 111 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~-~R~y~s~~~L~ 189 (566)
+.+||..+++....-..+........+.++|+++++|+.+ ..+++||.. +.+- +.. +.. ...-.+++..+
T Consensus 132 i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D---~~i~iwd~~---~~~~--~~~-~~~h~~~V~~v~~~p 202 (410)
T 1vyh_C 132 IKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSAD---MTIKLWDFQ---GFEC--IRT-MHGHDHNVSSVSIMP 202 (410)
T ss_dssp EEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETT---SCCCEEETT---SSCE--EEC-CCCCSSCEEEEEECS
T ss_pred EEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCC---CeEEEEeCC---CCce--eEE-EcCCCCCEEEEEEeC
Confidence 7789988876433211222222223445789999999864 567889876 4322 111 221 12223445556
Q ss_pred CCcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEcC--eeEEEeccCCeEE
Q 048017 190 DNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANR--RSILFDYINNKLV 265 (566)
Q Consensus 190 dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~--~~e~yDp~t~~W~ 265 (566)
+|+.++.|+.+ .++.+| ..+. .. ...+ .... ..--.+...++|++++.|+. .+.+||..+.+..
T Consensus 203 ~~~~l~s~s~D-~~i~~wd~~~~---~~-~~~~-~~h~------~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~ 269 (410)
T 1vyh_C 203 NGDHIVSASRD-KTIKMWEVQTG---YC-VKTF-TGHR------EWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 269 (410)
T ss_dssp SSSEEEEEETT-SEEEEEETTTC---CE-EEEE-ECCS------SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE
T ss_pred CCCEEEEEeCC-CeEEEEECCCC---cE-EEEE-eCCC------ccEEEEEECCCCCEEEEEcCCCeEEEEECCCCcee
Confidence 88988888865 456666 3321 11 1111 1110 01112233468999988875 4678998887654
No 40
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.84 E-value=0.078 Score=54.18 Aligned_cols=137 Identities=12% Similarity=0.110 Sum_probs=72.4
Q ss_pred eEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccc-cccCcceEEEe
Q 048017 110 HSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLW-DRRWYASNQIL 188 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~-~~R~y~s~~~L 188 (566)
.+.+||..+.+....-... ........-++|+++++|+.+ ..+++||.. +.+-... +. ....-.+.+..
T Consensus 79 ~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d---g~i~iwd~~---~~~~~~~---~~~h~~~v~~~~~~ 148 (420)
T 3vl1_A 79 HDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTE---GDIKVLDSN---FNLQREI---DQAHVSEITKLKFF 148 (420)
T ss_dssp EEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETT---SCEEEECTT---SCEEEEE---TTSSSSCEEEEEEC
T ss_pred cEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECC---CCEEEEeCC---Ccceeee---cccccCccEEEEEC
Confidence 3567776654322111111 111222345689999998764 568999987 4332211 21 22222344555
Q ss_pred cCCcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEcC--eeEEEeccCCeEE
Q 048017 189 PDNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANR--RSILFDYINNKLV 265 (566)
Q Consensus 189 ~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~--~~e~yDp~t~~W~ 265 (566)
+||+.++.|+.++ .+.+| ..+. .....+ ..... .--.+...++|+.++.|+. ...+||..+++-.
T Consensus 149 ~~~~~l~s~s~d~-~i~iwd~~~~--~~~~~~---~~h~~------~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~ 216 (420)
T 3vl1_A 149 PSGEALISSSQDM-QLKIWSVKDG--SNPRTL---IGHRA------TVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTI 216 (420)
T ss_dssp TTSSEEEEEETTS-EEEEEETTTC--CCCEEE---ECCSS------CEEEEEEETTTTEEEEEETTSCEEEEETTTTEEE
T ss_pred CCCCEEEEEeCCC-eEEEEeCCCC--cCceEE---cCCCC------cEEEEEEcCCCCEEEEEcCCCcEEEeECCCCcee
Confidence 6899888887653 56666 3321 011111 11100 0112334578998888874 4778999988755
Q ss_pred Eee
Q 048017 266 KEF 268 (566)
Q Consensus 266 ~~~ 268 (566)
+.+
T Consensus 217 ~~~ 219 (420)
T 3vl1_A 217 HTF 219 (420)
T ss_dssp EEE
T ss_pred EEe
Confidence 433
No 41
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.83 E-value=0.11 Score=51.83 Aligned_cols=247 Identities=11% Similarity=0.104 Sum_probs=128.0
Q ss_pred EEeeCCeEEEEeccCCCCCCCCCCCCccccCCCCCCCcccceEEEEECCCCcEEeCcCCC--cccccCCeecCC--CcEE
Q 048017 69 QVLNNDKVIIFDRTDMGPSNLSLPIDKCRKEGDVGQLDCTAHSVLYDIASNTFRPLLLQT--DTWCSSGAVLSD--GTLV 144 (566)
Q Consensus 69 ~~l~~gkV~~~gg~~~~~s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~--~~~c~~~~~l~d--G~l~ 144 (566)
+.-++|+.++.|+.+ | .+.+||...++++.+.... .....+....++ ++++
T Consensus 18 ~~s~~~~~l~~~~~d----------g---------------~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l 72 (379)
T 3jrp_A 18 VLDYYGKRLATCSSD----------K---------------TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTIL 72 (379)
T ss_dssp EECSSSSEEEEEETT----------S---------------CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEE
T ss_pred EEcCCCCEEEEEECC----------C---------------cEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEE
Confidence 344688888888753 1 2678888766666544321 111112233344 8999
Q ss_pred EEcCCCCCCCeEEEEcCCCCCCCcccccCccccc-ccCcceEEEecC--CcEEEEcCccCCeEEEE-eCCCCCCCeeeec
Q 048017 145 QTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWD-RRWYASNQILPD--NRIIVVGGRRVFTYEFY-PKIDSLSSSLYLR 220 (566)
Q Consensus 145 vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~-~R~y~s~~~L~d--G~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p 220 (566)
++|+.+ ..+.+||.. +.+|..... +.. ...-.+++..++ |+.+++|+.++ .+.+| .... .......
T Consensus 73 ~s~~~d---g~v~iwd~~---~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~d~-~i~v~d~~~~--~~~~~~~ 142 (379)
T 3jrp_A 73 ASCSYD---GKVLIWKEE---NGRWSQIAV-HAVHSASVNSVQWAPHEYGPLLLVASSDG-KVSVVEFKEN--GTTSPII 142 (379)
T ss_dssp EEEETT---SCEEEEEEE---TTEEEEEEE-ECCCSSCEEEEEECCGGGCSEEEEEETTS-EEEEEECCTT--SCCCEEE
T ss_pred EEeccC---CEEEEEEcC---CCceeEeee-ecCCCcceEEEEeCCCCCCCEEEEecCCC-cEEEEecCCC--CceeeEE
Confidence 998864 568899988 666655443 332 222233444556 88888888654 45555 3221 0111111
Q ss_pred cccccCCCCCCCCccceEEEec-------------CCcEEEEEcC--eeEEEeccCCe--EEEeecccCCCCCCccCCCC
Q 048017 221 FLIETRDPGEENNLYPFLHLLP-------------DGNLFIFANR--RSILFDYINNK--LVKEFPVIPGNDKRNYPSTG 283 (566)
Q Consensus 221 ~l~~~~d~~~~~~~yp~~~~l~-------------~G~Ifv~Gg~--~~e~yDp~t~~--W~~~~p~lp~~~~r~~~~~g 283 (566)
+ ..... .. -.+...+ ++++++.|+. ...+||..+++ +. ....+... . +
T Consensus 143 ~-~~~~~-----~v-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~h--~-----~ 207 (379)
T 3jrp_A 143 I-DAHAI-----GV-NSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYV-LESTLEGH--S-----D 207 (379)
T ss_dssp E-ECCTT-----CE-EEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEE-EEEEECCC--S-----S
T ss_pred e-cCCCC-----ce-EEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCccee-eEEEEecc--c-----C
Confidence 0 00000 00 0111223 6888888875 46778876643 32 12222221 1 1
Q ss_pred ceeeecccccCCCCCCCCCCCCC---CEEEEEcCCCCCccccccccccccccCCeeEEEEeeCCCCCeEEe--cc-CCCc
Q 048017 284 SSILLPVKLSAGSDGNGTAALPD---AEVMVCGGAPAGAFIKSDKESVYVEASRTCGRLKVTDKYPVWSME--FM-PMPR 357 (566)
Q Consensus 284 ~avllpl~~~~~~~~~~y~~~~~---gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~--~M-~~~R 357 (566)
...-+...| + ++++++|+.+ ..+..+|+......+... .. ....
T Consensus 208 ~v~~~~~sp-------------~~~~~~~l~s~~~d-----------------g~i~iwd~~~~~~~~~~~~~~~~~~~~ 257 (379)
T 3jrp_A 208 WVRDVAWSP-------------TVLLRSYLASVSQD-----------------RTCIIWTQDNEQGPWKKTLLKEEKFPD 257 (379)
T ss_dssp CEEEEEECC-------------CCSSSEEEEEEETT-----------------SCEEEEEESSTTSCCEEEESSSSCCSS
T ss_pred cEeEEEECC-------------CCCCCCeEEEEeCC-----------------CEEEEEeCCCCCccceeeeeccccCCC
Confidence 111111111 4 7889988865 235567766433344332 22 1222
Q ss_pred ccceeEEccCCeEEEEcCCCCCCCCCccccCc--CCcEEeccCC
Q 048017 358 VMSDMLLLPSGDVIIINGASNGTAGWEDAEEP--DRRFVVLNPS 399 (566)
Q Consensus 358 ~~~~~vvLpdG~V~vvGG~~~g~~~~~~~ydP--t~~Wt~~~~~ 399 (566)
.-.....-|||+.+++++.+ | ....||. ..+|..+...
T Consensus 258 ~v~~~~~s~~g~~l~~~~~d-g---~i~iw~~~~~~~~~~~~~~ 297 (379)
T 3jrp_A 258 VLWRASWSLSGNVLALSGGD-N---KVTLWKENLEGKWEPAGEV 297 (379)
T ss_dssp CEEEEEECSSSCCEEEEESS-S---SEEEEEEEETTEEEEEEEE
T ss_pred cEEEEEEcCCCCEEEEecCC-C---cEEEEeCCCCCccccccce
Confidence 22233456899999988875 3 2345666 6778765443
No 42
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.74 E-value=0.074 Score=53.57 Aligned_cols=136 Identities=13% Similarity=0.079 Sum_probs=71.2
Q ss_pred EEEEECCCCcEEeCcCCC--cccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCc-ccccCcccc-cccCcceEE
Q 048017 111 SVLYDIASNTFRPLLLQT--DTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCD-WVELSKNLW-DRRWYASNQ 186 (566)
Q Consensus 111 ~~~yDp~t~~w~~l~~~~--~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~-W~~~~~~M~-~~R~y~s~~ 186 (566)
+.+||..++.|+.+.... ..........++|+++++|+.+ ..+++||.. +.+ |..... +. ....-.+.+
T Consensus 35 i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d---~~v~vwd~~---~~~~~~~~~~-~~~~~~~v~~~~ 107 (377)
T 3dwl_C 35 VELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD---RNAYVYEKR---PDGTWKQTLV-LLRLNRAATFVR 107 (377)
T ss_dssp BCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT---SSEEEC---------CCCCEEE-CCCCSSCEEEEE
T ss_pred EEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC---CeEEEEEcC---CCCceeeeeE-ecccCCceEEEE
Confidence 568899888887776543 2222334556789999998864 568999987 444 544332 22 222223344
Q ss_pred EecCCcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccc-cCCCCCCCCccceEEEecCCcEEEEEcCe--eEEEeccCC
Q 048017 187 ILPDNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIE-TRDPGEENNLYPFLHLLPDGNLFIFANRR--SILFDYINN 262 (566)
Q Consensus 187 ~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~-~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~~--~e~yDp~t~ 262 (566)
..+||+.++.|+.++ .+.+| .... ..|.....+.. ... .--.+...++|++++.|+.+ ..+||..+.
T Consensus 108 ~~~~~~~l~~~~~d~-~i~iwd~~~~--~~~~~~~~~~~~h~~------~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 178 (377)
T 3dwl_C 108 WSPNEDKFAVGSGAR-VISVCYFEQE--NDWWVSKHLKRPLRS------TILSLDWHPNNVLLAAGCADRKAYVLSAYVR 178 (377)
T ss_dssp CCTTSSCCEEEESSS-CEEECCC-------CCCCEEECSSCCS------CEEEEEECTTSSEEEEEESSSCEEEEEECCS
T ss_pred ECCCCCEEEEEecCC-eEEEEEECCc--ccceeeeEeecccCC------CeEEEEEcCCCCEEEEEeCCCEEEEEEEEec
Confidence 446899888888754 35555 2221 11211111111 100 01122345789999888753 677887543
No 43
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=96.74 E-value=0.32 Score=49.53 Aligned_cols=50 Identities=14% Similarity=0.296 Sum_probs=32.9
Q ss_pred eEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCC
Q 048017 110 HSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPC 162 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~ 162 (566)
.+.+||..+.+-...-..+...-...+..+||+.+++||.+ ..+.+||..
T Consensus 89 ~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d---~~v~iw~~~ 138 (380)
T 3iz6_a 89 RLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLD---SACSIFNLS 138 (380)
T ss_dssp EEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSS---SCCEEEECC
T ss_pred eEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCC---CcEEEEECC
Confidence 37789998876543322233333344667899999999975 467778865
No 44
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.73 E-value=0.23 Score=50.92 Aligned_cols=250 Identities=10% Similarity=0.044 Sum_probs=124.3
Q ss_pred eEEEEECCCCcEEeCcCC-CcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEe
Q 048017 110 HSVLYDIASNTFRPLLLQ-TDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQIL 188 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~-~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L 188 (566)
.+.+||..+++....... +.......+..++|+++++|+.+ ..+.+||.. +.+... . +............
T Consensus 114 ~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~d---g~i~iwd~~---~~~~~~--~-~~~~~~~v~~~~~ 184 (401)
T 4aez_A 114 NVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGN---GLVDIYDVE---SQTKLR--T-MAGHQARVGCLSW 184 (401)
T ss_dssp EEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETT---SCEEEEETT---TCCEEE--E-ECCCSSCEEEEEE
T ss_pred eEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCC---CeEEEEECc---CCeEEE--E-ecCCCCceEEEEE
Confidence 477889888877654332 22222234555799999998763 468899987 443221 1 3222222333444
Q ss_pred cCCcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEcC--eeEEEeccCCeEE
Q 048017 189 PDNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANR--RSILFDYINNKLV 265 (566)
Q Consensus 189 ~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~--~~e~yDp~t~~W~ 265 (566)
+++.++.|+.++ .+.+| .... ......+ ..... .--.+...++|++++.|+. .+.+||..+.+-.
T Consensus 185 -~~~~l~~~~~dg-~i~i~d~~~~---~~~~~~~-~~~~~------~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~ 252 (401)
T 4aez_A 185 -NRHVLSSGSRSG-AIHHHDVRIA---NHQIGTL-QGHSS------EVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPK 252 (401)
T ss_dssp -ETTEEEEEETTS-EEEEEETTSS---SCEEEEE-ECCSS------CEEEEEECTTSSEEEEEETTSCEEEEETTCSSEE
T ss_pred -CCCEEEEEcCCC-CEEEEecccC---cceeeEE-cCCCC------CeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCcc
Confidence 788888888663 45566 3211 1111111 11100 0112334568999998875 4778999886644
Q ss_pred EeecccCCCCCCccCCCCceeeecccccCCCCCCCCCCCCCCEEEEEcCCCCCccccccccccccccCCeeEEEEeeCCC
Q 048017 266 KEFPVIPGNDKRNYPSTGSSILLPVKLSAGSDGNGTAALPDAEVMVCGGAPAGAFIKSDKESVYVEASRTCGRLKVTDKY 345 (566)
Q Consensus 266 ~~~p~lp~~~~r~~~~~g~avllpl~~~~~~~~~~y~~~~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~ 345 (566)
..+. .. ... .-.... .|. ...++++||... ...+..+|+..
T Consensus 253 ~~~~---~~--~~~--v~~~~~---~p~------------~~~ll~~~~gs~---------------d~~i~i~d~~~-- 293 (401)
T 4aez_A 253 FTKT---NH--NAA--VKAVAW---CPW------------QSNLLATGGGTM---------------DKQIHFWNAAT-- 293 (401)
T ss_dssp EEEC---CC--SSC--CCEEEE---CTT------------STTEEEEECCTT---------------TCEEEEEETTT--
T ss_pred EEec---CC--cce--EEEEEE---CCC------------CCCEEEEecCCC---------------CCEEEEEECCC--
Confidence 3232 11 110 011112 111 345777765210 12355566542
Q ss_pred CCeEEeccCCCcccceeEEccCCeEEEE--cCCCCCCCCCccccCc-CCcEEeccCCCCCCcceeEEEEcCCCcEEEecC
Q 048017 346 PVWSMEFMPMPRVMSDMLLLPSGDVIII--NGASNGTAGWEDAEEP-DRRFVVLNPSKIPRMYHSSAVVLPDGRILVGGS 422 (566)
Q Consensus 346 ~~W~~~~M~~~R~~~~~vvLpdG~V~vv--GG~~~g~~~~~~~ydP-t~~Wt~~~~~~~~R~yhs~a~LlpdG~V~v~GG 422 (566)
.+-.. .+.....-......|+|+.+++ |..+ + ....||- +.+......+......-....+.|||+.+++||
T Consensus 294 ~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~g~~d-g---~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~ 368 (401)
T 4aez_A 294 GARVN-TVDAGSQVTSLIWSPHSKEIMSTHGFPD-N---NLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAA 368 (401)
T ss_dssp CCEEE-EEECSSCEEEEEECSSSSEEEEEECTTT-C---EEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEEC
T ss_pred CCEEE-EEeCCCcEEEEEECCCCCeEEEEeecCC-C---cEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEe
Confidence 11111 1111222223345688887777 4333 3 2345665 444443322211111122345679999999988
Q ss_pred CC
Q 048017 423 NP 424 (566)
Q Consensus 423 ~~ 424 (566)
..
T Consensus 369 ~d 370 (401)
T 4aez_A 369 SD 370 (401)
T ss_dssp TT
T ss_pred CC
Confidence 53
No 45
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=96.72 E-value=0.52 Score=46.41 Aligned_cols=248 Identities=10% Similarity=0.025 Sum_probs=118.3
Q ss_pred ceEEEEECCCCcEEeCcCCCcccccCCeecCCCc-EEEEcCCCCCCCeEEEEcCCCCCCCcccccCccccccc-------
Q 048017 109 AHSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGT-LVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRR------- 180 (566)
Q Consensus 109 ~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~-l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R------- 180 (566)
..+.+||+.+.+....-... ....+.++.+||+ +|+.+.. ...+.+||+. +.+-...-. +....
T Consensus 69 ~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~---~~~v~~~d~~---~~~~~~~~~-~~~~~~~~~~~~ 140 (353)
T 3vgz_A 69 GVVYRLDPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTV---NSAVTAIDAK---TGEVKGRLV-LDDRKRTEEVRP 140 (353)
T ss_dssp EEEEEECTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETT---TTEEEEEETT---TCCEEEEEE-SCCCCCCSSCCC
T ss_pred ccEEEEcCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecC---CCEEEEEeCC---CCeeEEEEe-cCCCccccccCC
Confidence 35789999988754322111 1123445667887 6666543 2578999998 444221111 11110
Q ss_pred C-cceEEEecCCc-EEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccc-eEEEecCCcEEEEEc--Cee
Q 048017 181 W-YASNQILPDNR-IIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYP-FLHLLPDGNLFIFAN--RRS 254 (566)
Q Consensus 181 ~-y~s~~~L~dG~-VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp-~~~~l~~G~Ifv~Gg--~~~ 254 (566)
. -.+.+.-+||+ +|+.+......+.+| +.+. ......+.. . ..| .....++|+.+++++ ...
T Consensus 141 ~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~--~~~~~~~~~-~---------~~~~~~~~s~dg~~l~~~~~~~~i 208 (353)
T 3vgz_A 141 LQPRELVADDATNTVYISGIGKESVIWVVDGGNI--KLKTAIQNT-G---------KMSTGLALDSEGKRLYTTNADGEL 208 (353)
T ss_dssp CEEEEEEEETTTTEEEEEEESSSCEEEEEETTTT--EEEEEECCC-C---------TTCCCCEEETTTTEEEEECTTSEE
T ss_pred CCCceEEECCCCCEEEEEecCCCceEEEEcCCCC--ceEEEecCC-C---------CccceEEECCCCCEEEEEcCCCeE
Confidence 0 12344456776 555542333445566 4432 011112211 0 011 223467887555554 356
Q ss_pred EEEeccCCeEEEeecccCCCCCCccCCCCceeeecccccCCCCCCCCCCCCCCEEEEEcCCCCCccccccccccccccCC
Q 048017 255 ILFDYINNKLVKEFPVIPGNDKRNYPSTGSSILLPVKLSAGSDGNGTAALPDAEVMVCGGAPAGAFIKSDKESVYVEASR 334 (566)
Q Consensus 255 e~yDp~t~~W~~~~p~lp~~~~r~~~~~g~avllpl~~~~~~~~~~y~~~~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~ 334 (566)
.+||..+++....++ .+...++.++ ...++ .|. ...+|+.... ..
T Consensus 209 ~~~d~~~~~~~~~~~-~~~~~~~~~~--~~~~~---s~d------------g~~l~~~~~~-----------------~~ 253 (353)
T 3vgz_A 209 ITIDTADNKILSRKK-LLDDGKEHFF--INISL---DTA------------RQRAFITDSK-----------------AA 253 (353)
T ss_dssp EEEETTTTEEEEEEE-CCCSSSCCCE--EEEEE---ETT------------TTEEEEEESS-----------------SS
T ss_pred EEEECCCCeEEEEEE-cCCCCCCccc--ceEEE---CCC------------CCEEEEEeCC-----------------CC
Confidence 789999887654332 1111011111 01122 111 3456665432 13
Q ss_pred eeEEEEeeCCCCCeEEe-ccCCCcccceeEEccCCe-EEEEcCCCCCCCCCccccCc-CCcEEeccCCCCCCcceeEEEE
Q 048017 335 TCGRLKVTDKYPVWSME-FMPMPRVMSDMLLLPSGD-VIIINGASNGTAGWEDAEEP-DRRFVVLNPSKIPRMYHSSAVV 411 (566)
Q Consensus 335 s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvLpdG~-V~vvGG~~~g~~~~~~~ydP-t~~Wt~~~~~~~~R~yhs~a~L 411 (566)
.+.++|+.. .+.... +...+ .....-|||+ +|+.+..+ + ....+|+ +.+.... .+....-+ ...+
T Consensus 254 ~v~~~d~~~--~~~~~~~~~~~~---~~~~~s~dg~~l~v~~~~~-~---~v~~~d~~~~~~~~~--~~~~~~~~-~~~~ 321 (353)
T 3vgz_A 254 EVLVVDTRN--GNILAKVAAPES---LAVLFNPARNEAYVTHRQA-G---KVSVIDAKSYKVVKT--FDTPTHPN-SLAL 321 (353)
T ss_dssp EEEEEETTT--CCEEEEEECSSC---CCEEEETTTTEEEEEETTT-T---EEEEEETTTTEEEEE--EECCSEEE-EEEE
T ss_pred EEEEEECCC--CcEEEEEEcCCC---ceEEECCCCCEEEEEECCC-C---eEEEEECCCCeEEEE--EecCCCCC-eEEE
Confidence 456677642 333322 44443 2345568987 77766433 2 2346777 4443322 12222223 3446
Q ss_pred cCCCc-EEEecCC
Q 048017 412 LPDGR-ILVGGSN 423 (566)
Q Consensus 412 lpdG~-V~v~GG~ 423 (566)
.|||+ +|++...
T Consensus 322 s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 322 SADGKTLYVSVKQ 334 (353)
T ss_dssp CTTSCEEEEEEEC
T ss_pred cCCCCEEEEEEcc
Confidence 79998 7776654
No 46
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=96.72 E-value=0.48 Score=47.38 Aligned_cols=95 Identities=11% Similarity=-0.055 Sum_probs=50.1
Q ss_pred eEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCC-CCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEe
Q 048017 110 HSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYN-VGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQIL 188 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~-~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L 188 (566)
++..+|+++++++.+.......-...++-+||+.+.++... +....+.+|+...+ +.+.+.+.. ....-..+....+
T Consensus 30 ~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~-~g~~~~~~~-~~~~~~~p~~~~~ 107 (361)
T 3scy_A 30 YTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKE-KGTLHLLNT-QKTMGADPCYLTT 107 (361)
T ss_dssp EEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETT-TTEEEEEEE-EECSSSCEEEEEE
T ss_pred EEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCC-CCcEEEeeE-eccCCCCcEEEEE
Confidence 46667889998887654311111223556788855554432 23356665543310 455555443 3322234444555
Q ss_pred cCCcEEEEcCccCCeEEEE
Q 048017 189 PDNRIIVVGGRRVFTYEFY 207 (566)
Q Consensus 189 ~dG~VyvvGG~~~~s~E~y 207 (566)
||+.+++.......+.+|
T Consensus 108 -dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 108 -NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp -CSSEEEEEETTTTEEEEE
T ss_pred -CCCEEEEEECCCCEEEEE
Confidence 777555554444566677
No 47
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.71 E-value=0.47 Score=47.19 Aligned_cols=135 Identities=16% Similarity=0.142 Sum_probs=76.5
Q ss_pred eEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCccccc-ccCcceEEEe
Q 048017 110 HSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWD-RRWYASNQIL 188 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~-~R~y~s~~~L 188 (566)
.+.+||..+++-...-..........++.+||+.+++|+.. ..+.+||.. +.+-. .. +.. ...-.+.+.-
T Consensus 103 ~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~d---g~v~i~~~~---~~~~~--~~-~~~~~~~v~~~~~s 173 (321)
T 3ow8_A 103 HIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHV---GKVNIFGVE---SGKKE--YS-LDTRGKFILSIAYS 173 (321)
T ss_dssp EEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTT---SEEEEEETT---TCSEE--EE-EECSSSCEEEEEEC
T ss_pred cEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCC---CcEEEEEcC---CCcee--EE-ecCCCceEEEEEEC
Confidence 47789988876433211112222234566899999999864 578899987 33211 11 221 2223345556
Q ss_pred cCCcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEcCe--eEEEeccCCeEE
Q 048017 189 PDNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANRR--SILFDYINNKLV 265 (566)
Q Consensus 189 ~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~~--~e~yDp~t~~W~ 265 (566)
+||+.++.|+.++ .+.+| ..+. .. ...+..... .. -.+...++|++++.|+.+ ..+||..+.+..
T Consensus 174 pdg~~lasg~~dg-~i~iwd~~~~---~~--~~~~~~h~~-----~v-~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~ 241 (321)
T 3ow8_A 174 PDGKYLASGAIDG-IINIFDIATG---KL--LHTLEGHAM-----PI-RSLTFSPDSQLLVTASDDGYIKIYDVQHANLA 241 (321)
T ss_dssp TTSSEEEEEETTS-CEEEEETTTT---EE--EEEECCCSS-----CC-CEEEECTTSCEEEEECTTSCEEEEETTTCCEE
T ss_pred CCCCEEEEEcCCC-eEEEEECCCC---cE--EEEEcccCC-----ce-eEEEEcCCCCEEEEEcCCCeEEEEECCCccee
Confidence 7999999988764 45666 3321 11 111111100 01 123345799999998854 678999887654
No 48
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=96.59 E-value=0.5 Score=49.01 Aligned_cols=90 Identities=10% Similarity=0.077 Sum_probs=51.0
Q ss_pred EEEEECCCCcEEeCcCC--CcccccCCeecC-CCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEE
Q 048017 111 SVLYDIASNTFRPLLLQ--TDTWCSSGAVLS-DGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQI 187 (566)
Q Consensus 111 ~~~yDp~t~~w~~l~~~--~~~~c~~~~~l~-dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~ 187 (566)
+.+||..+++...+-.. +.....+..+.+ |+.++++|+.+ ..+++||.. +.........-...-+..+...
T Consensus 144 i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D---~~v~iwd~~---~~~~~~~~~~~~~~~~~~~~~~ 217 (435)
T 4e54_B 144 IMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSME---GTTRLQDFK---GNILRVFASSDTINIWFCSLDV 217 (435)
T ss_dssp EEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSS---SCEEEEETT---SCEEEEEECCSSCSCCCCCEEE
T ss_pred EEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCC---CEEEEeecc---CCceeEEeccCCCCccEEEEEE
Confidence 77888887654332211 211112223333 78899998864 568899987 4443322210112233445556
Q ss_pred ecCCcEEEEcCccCCeEEEE
Q 048017 188 LPDNRIIVVGGRRVFTYEFY 207 (566)
Q Consensus 188 L~dG~VyvvGG~~~~s~E~y 207 (566)
-+||++++.|+.++ .+.+|
T Consensus 218 ~~~~~~l~~g~~dg-~i~~w 236 (435)
T 4e54_B 218 SASSRMVVTGDNVG-NVILL 236 (435)
T ss_dssp ETTTTEEEEECSSS-BEEEE
T ss_pred CCCCCEEEEEeCCC-cEeee
Confidence 67999999998764 45555
No 49
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=96.54 E-value=0.46 Score=46.43 Aligned_cols=104 Identities=11% Similarity=0.084 Sum_probs=57.9
Q ss_pred eeCCeEEEEeccCCCCCCCCCCCCccccCCCCCCCcccceEEEEECCCCcEEeCcCC--CcccccCCeecC--CCcEEEE
Q 048017 71 LNNDKVIIFDRTDMGPSNLSLPIDKCRKEGDVGQLDCTAHSVLYDIASNTFRPLLLQ--TDTWCSSGAVLS--DGTLVQT 146 (566)
Q Consensus 71 l~~gkV~~~gg~~~~~s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~--~~~~c~~~~~l~--dG~l~vv 146 (566)
-++|+.++.|+.+. .+.+||..+++.+.+..+ +...-......+ +|++++.
T Consensus 18 s~~g~~las~s~D~-------------------------~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s 72 (297)
T 2pm7_B 18 DYYGKRMATCSSDK-------------------------TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILAS 72 (297)
T ss_dssp CTTSSEEEEEETTS-------------------------CEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEE
T ss_pred CCCCCEEEEEeCCC-------------------------EEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEE
Confidence 36899888887541 267888765443322221 111001111222 4889999
Q ss_pred cCCCCCCCeEEEEcCCCCCCCcccccCccccc-ccCcceEEEecC--CcEEEEcCccCCeEEEE
Q 048017 147 GGYNVGDRVIRLFTPCNDEGCDWVELSKNLWD-RRWYASNQILPD--NRIIVVGGRRVFTYEFY 207 (566)
Q Consensus 147 GG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~-~R~y~s~~~L~d--G~VyvvGG~~~~s~E~y 207 (566)
|+.+ ..+++||.. +.+|..... +.. ...-.+++..++ |++++.|+.++ .+.+|
T Consensus 73 ~s~D---~~v~iWd~~---~~~~~~~~~-~~~h~~~v~~v~~~p~~~g~~l~s~s~d~-~v~~w 128 (297)
T 2pm7_B 73 CSYD---GKVMIWKEE---NGRWSQIAV-HAVHSASVNSVQWAPHEYGPMLLVASSDG-KVSVV 128 (297)
T ss_dssp EETT---TEEEEEEBS---SSCBCCCEE-ECCCSSCEEEEEECCGGGCSEEEEEETTS-EEEEE
T ss_pred EcCC---CEEEEEEcC---CCceEEEEE-eecCCCceeEEEeCcCCCCcEEEEEECCC-cEEEE
Confidence 9864 689999988 666765433 221 111223333344 78888887653 45566
No 50
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.50 E-value=0.78 Score=45.84 Aligned_cols=210 Identities=8% Similarity=-0.049 Sum_probs=107.4
Q ss_pred CCeEEEEcCCCCCCCcccccC----cccccccCcceEEEecCCcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCC
Q 048017 153 DRVIRLFTPCNDEGCDWVELS----KNLWDRRWYASNQILPDNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRD 227 (566)
Q Consensus 153 ~~~v~~ydP~~~~t~~W~~~~----~~M~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d 227 (566)
..++.+|||. +.++...- +....+.. +....+.++++|++... ...+.++ +.+. ..-...+..
T Consensus 16 ~~~l~~~d~~---t~~~~~~i~~~~n~~~lg~~-~~~i~~~~~~lyv~~~~-~~~v~viD~~t~--~~~~~i~~~----- 83 (328)
T 3dsm_A 16 NATLSYYDPA---TCEVENEVFYRANGFKLGDV-AQSMVIRDGIGWIVVNN-SHVIFAIDINTF--KEVGRITGF----- 83 (328)
T ss_dssp CBEEEEEETT---TTEEECSHHHHHHSSCCBSC-EEEEEEETTEEEEEEGG-GTEEEEEETTTC--CEEEEEECC-----
T ss_pred CceEEEEECC---CCEEhhhhHhhhcCcccCcc-ceEEEEECCEEEEEEcC-CCEEEEEECccc--EEEEEcCCC-----
Confidence 5789999999 66664321 00112222 22334458899998753 3456777 5542 111112211
Q ss_pred CCCCCCccceEEEe-cCCcEEEEE--cCeeEEEeccCCeEEEeecccCCCC-CCccCCCCceeeecccccCCCCCCCCCC
Q 048017 228 PGEENNLYPFLHLL-PDGNLFIFA--NRRSILFDYINNKLVKEFPVIPGND-KRNYPSTGSSILLPVKLSAGSDGNGTAA 303 (566)
Q Consensus 228 ~~~~~~~yp~~~~l-~~G~Ifv~G--g~~~e~yDp~t~~W~~~~p~lp~~~-~r~~~~~g~avllpl~~~~~~~~~~y~~ 303 (566)
..|...+. ++|++|+.. +....++|+++++..+.++ +.... ....|. +.++ .
T Consensus 84 ------~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~-~g~~~~~~~~p~-~i~~--~-------------- 139 (328)
T 3dsm_A 84 ------TSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIE-CPDMDMESGSTE-QMVQ--Y-------------- 139 (328)
T ss_dssp ------SSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEE-CTTCCTTTCBCC-CEEE--E--------------
T ss_pred ------CCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEE-cCCccccCCCcc-eEEE--E--------------
Confidence 23555555 899999987 4568899999998764443 11100 001221 2222 1
Q ss_pred CCCCEEEEEcCCCCCccccccccccccccCCeeEEEEeeCCCCCeEEe-ccCCCcccceeEEccCCeEEEEcCCCCCC--
Q 048017 304 LPDAEVMVCGGAPAGAFIKSDKESVYVEASRTCGRLKVTDKYPVWSME-FMPMPRVMSDMLLLPSGDVIIINGASNGT-- 380 (566)
Q Consensus 304 ~~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvLpdG~V~vvGG~~~g~-- 380 (566)
++++|+..-.. .+.+.+||+.. .+.... +.. ..-....+-+||++|++.-.....
T Consensus 140 --~~~lyv~~~~~----------------~~~v~viD~~t--~~~~~~i~~g--~~p~~i~~~~dG~l~v~~~~~~~~~~ 197 (328)
T 3dsm_A 140 --GKYVYVNCWSY----------------QNRILKIDTET--DKVVDELTIG--IQPTSLVMDKYNKMWTITDGGYEGSP 197 (328)
T ss_dssp --TTEEEEEECTT----------------CCEEEEEETTT--TEEEEEEECS--SCBCCCEECTTSEEEEEBCCBCTTCS
T ss_pred --CCEEEEEcCCC----------------CCEEEEEECCC--CeEEEEEEcC--CCccceEEcCCCCEEEEECCCccCCc
Confidence 78999874210 14566777653 333322 221 112344566899999987432111
Q ss_pred ----CCCccccCc-CCcEEeccCCCCCCcceeEEEEcCCCc-EEEec
Q 048017 381 ----AGWEDAEEP-DRRFVVLNPSKIPRMYHSSAVVLPDGR-ILVGG 421 (566)
Q Consensus 381 ----~~~~~~ydP-t~~Wt~~~~~~~~R~yhs~a~LlpdG~-V~v~G 421 (566)
.....++|+ +.+....-..+....-++ ..+-|||+ +|++.
T Consensus 198 ~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~-la~~~d~~~lyv~~ 243 (328)
T 3dsm_A 198 YGYEAPSLYRIDAETFTVEKQFKFKLGDWPSE-VQLNGTRDTLYWIN 243 (328)
T ss_dssp SCBCCCEEEEEETTTTEEEEEEECCTTCCCEE-EEECTTSCEEEEES
T ss_pred cccCCceEEEEECCCCeEEEEEecCCCCCcee-EEEecCCCEEEEEc
Confidence 112346788 665543222221222223 34557655 66653
No 51
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=96.43 E-value=0.56 Score=47.21 Aligned_cols=133 Identities=10% Similarity=0.064 Sum_probs=72.6
Q ss_pred EEEEECCCCcEEeCcCC--CcccccCCeecC-CCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEE
Q 048017 111 SVLYDIASNTFRPLLLQ--TDTWCSSGAVLS-DGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQI 187 (566)
Q Consensus 111 ~~~yDp~t~~w~~l~~~--~~~~c~~~~~l~-dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~ 187 (566)
+.+||..+.+....-.. +.....+....+ ++.++++|+.+ ..+++||.. +.........-....+-.+.+.
T Consensus 98 i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d---~~i~iwd~~---~~~~~~~~~~~~~~~~v~~~~~ 171 (383)
T 3ei3_B 98 IILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR---GATTLRDFS---GSVIQVFAKTDSWDYWYCCVDV 171 (383)
T ss_dssp EEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT---TEEEEEETT---SCEEEEEECCCCSSCCEEEEEE
T ss_pred EEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC---CEEEEEECC---CCceEEEeccCCCCCCeEEEEE
Confidence 77899988776654321 222222334455 67888888764 578999987 4443332210111122334555
Q ss_pred ecCCcEEEEcCccCCeEEEEeCCCCCCCeeeeccccccCCCCCCCCccceEEEecCCc-EEEEEcC--eeEEEeccC
Q 048017 188 LPDNRIIVVGGRRVFTYEFYPKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGN-LFIFANR--RSILFDYIN 261 (566)
Q Consensus 188 L~dG~VyvvGG~~~~s~E~yP~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~-Ifv~Gg~--~~e~yDp~t 261 (566)
-+|++.++.|+.++ .+.+|..+. ....... .... .--.+...++++ +++.|+. ...+||..+
T Consensus 172 ~~~~~~l~~~~~d~-~i~i~d~~~--~~~~~~~---~h~~------~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 172 SVSRQMLATGDSTG-RLLLLGLDG--HEIFKEK---LHKA------KVTHAEFNPRCDWLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp ETTTTEEEEEETTS-EEEEEETTS--CEEEEEE---CSSS------CEEEEEECSSCTTEEEEEETTSEEEEEEGGG
T ss_pred CCCCCEEEEECCCC-CEEEEECCC--CEEEEec---cCCC------cEEEEEECCCCCCEEEEEeCCCEEEEEeCCC
Confidence 67899999888663 455662221 0111111 1000 011233456888 8888875 467899887
No 52
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=96.42 E-value=0.81 Score=46.70 Aligned_cols=109 Identities=20% Similarity=0.224 Sum_probs=62.7
Q ss_pred CeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccc-cccCcceEEEecCCcEEEEcCccCCeEEEE-eCCCC
Q 048017 135 GAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLW-DRRWYASNQILPDNRIIVVGGRRVFTYEFY-PKIDS 212 (566)
Q Consensus 135 ~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~-~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~ 212 (566)
..+.+||+.+++|+.+ ..+++||.. +.+-.. . +. ....-.+.+..+||+.++.|+.+ .++.+| ..+.
T Consensus 129 v~~s~dg~~l~s~~~d---~~i~iwd~~---~~~~~~--~-~~~h~~~v~~~~~~p~~~~l~s~s~d-~~v~iwd~~~~- 197 (393)
T 1erj_A 129 VCFSPDGKFLATGAED---RLIRIWDIE---NRKIVM--I-LQGHEQDIYSLDYFPSGDKLVSGSGD-RTVRIWDLRTG- 197 (393)
T ss_dssp EEECTTSSEEEEEETT---SCEEEEETT---TTEEEE--E-ECCCSSCEEEEEECTTSSEEEEEETT-SEEEEEETTTT-
T ss_pred EEECCCCCEEEEEcCC---CeEEEEECC---CCcEEE--E-EccCCCCEEEEEEcCCCCEEEEecCC-CcEEEEECCCC-
Confidence 4455799999999864 578999987 443221 1 22 12222344555789988888765 455666 3321
Q ss_pred CCCee-eeccccccCCCCCCCCccceEEEec-CCcEEEEEcC--eeEEEeccCCeEEE
Q 048017 213 LSSSL-YLRFLIETRDPGEENNLYPFLHLLP-DGNLFIFANR--RSILFDYINNKLVK 266 (566)
Q Consensus 213 ~~~w~-~~p~l~~~~d~~~~~~~yp~~~~l~-~G~Ifv~Gg~--~~e~yDp~t~~W~~ 266 (566)
... .... . + .-..+...+ +|++++.|+. .+.+||..+++..+
T Consensus 198 --~~~~~~~~---~-~------~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~ 243 (393)
T 1erj_A 198 --QCSLTLSI---E-D------GVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVE 243 (393)
T ss_dssp --EEEEEEEC---S-S------CEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEE
T ss_pred --eeEEEEEc---C-C------CcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEE
Confidence 111 1110 0 0 011223345 8899988874 46789998876543
No 53
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.37 E-value=0.53 Score=52.62 Aligned_cols=149 Identities=10% Similarity=0.106 Sum_probs=83.8
Q ss_pred EEeeCCeEEEEeccCCCCCCCCCCCCccccCCCCCCCcccceEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcC
Q 048017 69 QVLNNDKVIIFDRTDMGPSNLSLPIDKCRKEGDVGQLDCTAHSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGG 148 (566)
Q Consensus 69 ~~l~~gkV~~~gg~~~~~s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG 148 (566)
+.-++|+.++.++.+ ..+.+||..+++....-..+.....+....+||+.+++|+
T Consensus 20 ~~sp~~~~la~~~~~-------------------------g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 74 (814)
T 3mkq_A 20 DFHPTEPWVLTTLYS-------------------------GRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGS 74 (814)
T ss_dssp EECSSSSEEEEEETT-------------------------SEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEE
T ss_pred EECCCCCEEEEEeCC-------------------------CEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEe
Confidence 344688888887643 1377899888765432222232333455667999999998
Q ss_pred CCCCCCeEEEEcCCCCCCCcccccCccccc-ccCcceEEEecCCcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccC
Q 048017 149 YNVGDRVIRLFTPCNDEGCDWVELSKNLWD-RRWYASNQILPDNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETR 226 (566)
Q Consensus 149 ~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~-~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~ 226 (566)
.+ ..+.+||.. +.+... . +.. ...-.+.+.-+||+.+++|+.+ ..+.+| ..+ .+.....+....
T Consensus 75 ~d---g~i~vw~~~---~~~~~~--~-~~~~~~~v~~~~~s~~~~~l~~~~~d-g~i~vw~~~~----~~~~~~~~~~~~ 140 (814)
T 3mkq_A 75 DD---FRIRVFNYN---TGEKVV--D-FEAHPDYIRSIAVHPTKPYVLSGSDD-LTVKLWNWEN----NWALEQTFEGHE 140 (814)
T ss_dssp TT---SEEEEEETT---TCCEEE--E-EECCSSCEEEEEECSSSSEEEEEETT-SEEEEEEGGG----TSEEEEEEECCS
T ss_pred CC---CeEEEEECC---CCcEEE--E-EecCCCCEEEEEEeCCCCEEEEEcCC-CEEEEEECCC----CceEEEEEcCCC
Confidence 63 578999987 544322 1 221 1222234455689888888765 356666 332 122111111110
Q ss_pred CCCCCCCccc-eEEEec-CCcEEEEEcC--eeEEEeccCCe
Q 048017 227 DPGEENNLYP-FLHLLP-DGNLFIFANR--RSILFDYINNK 263 (566)
Q Consensus 227 d~~~~~~~yp-~~~~l~-~G~Ifv~Gg~--~~e~yDp~t~~ 263 (566)
... .+...+ +|++++.|+. ...+||..+.+
T Consensus 141 -------~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~ 174 (814)
T 3mkq_A 141 -------HFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQST 174 (814)
T ss_dssp -------SCEEEEEEETTEEEEEEEEETTSEEEEEETTCSS
T ss_pred -------CcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 011 122345 7888888874 46788886654
No 54
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.35 E-value=0.96 Score=45.06 Aligned_cols=223 Identities=14% Similarity=0.201 Sum_probs=110.4
Q ss_pred ecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccc-cccCcceEEEecCCcEEEEcCccCCeEEEE-eCCCCCC
Q 048017 137 VLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLW-DRRWYASNQILPDNRIIVVGGRRVFTYEFY-PKIDSLS 214 (566)
Q Consensus 137 ~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~-~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~ 214 (566)
..+||+++++|+.+ ..+++||.. +.+-.. . +. ...+-.+++.-++|+.++.||.+ ..+.+| ..+. ..
T Consensus 63 ~s~d~~~l~s~s~D---g~v~iWd~~---~~~~~~--~-~~~~~~~v~~~~~s~~~~~l~s~~~d-~~v~iw~~~~~-~~ 131 (340)
T 1got_B 63 WGTDSRLLLSASQD---GKLIIWDSY---TTNKVH--A-IPLRSSWVMTCAYAPSGNYVACGGLD-NICSIYNLKTR-EG 131 (340)
T ss_dssp ECTTSSEEEEEETT---TEEEEEETT---TCCEEE--E-EECSSSCEEEEEECTTSSEEEEEETT-CEEEEEETTTC-SB
T ss_pred ECCCCCEEEEEeCC---CcEEEEECC---CCCcce--E-eecCCccEEEEEECCCCCEEEEEeCC-CeEEEEECccC-CC
Confidence 34689999999864 579999987 433211 1 22 12233345556789999999876 355666 3321 00
Q ss_pred CeeeeccccccCCCCCCCCccceEEEecCCcEEEEEc-CeeEEEeccCCeEEEeecccCCCCCCccCCCCceeeeccccc
Q 048017 215 SSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFAN-RRSILFDYINNKLVKEFPVIPGNDKRNYPSTGSSILLPVKLS 293 (566)
Q Consensus 215 ~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg-~~~e~yDp~t~~W~~~~p~lp~~~~r~~~~~g~avllpl~~~ 293 (566)
.......+....+ .--.+...++++|+..++ ....+||..+++....+ ... . +...-+...|
T Consensus 132 ~~~~~~~~~~h~~------~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~---~~h--~-----~~v~~~~~~~- 194 (340)
T 1got_B 132 NVRVSRELAGHTG------YLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF---TGH--T-----GDVMSLSLAP- 194 (340)
T ss_dssp SCEEEEEEECCSS------CEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEE---CCC--S-----SCEEEEEECT-
T ss_pred cceeEEEecCCCc------cEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEE---cCC--C-----CceEEEEECC-
Confidence 1111111111110 001122245677554443 35778999988755332 221 1 1111111111
Q ss_pred CCCCCCCCCCCCCCEEEEEcCCCCCccccccccccccccCCeeEEEEeeCCCCCeEEe-ccCCCcccceeEEccCCeEEE
Q 048017 294 AGSDGNGTAALPDAEVMVCGGAPAGAFIKSDKESVYVEASRTCGRLKVTDKYPVWSME-FMPMPRVMSDMLLLPSGDVII 372 (566)
Q Consensus 294 ~~~~~~~y~~~~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvLpdG~V~v 372 (566)
++++++.|+.+ ..+..+|+.. ..-... .-..... .+....|+|+.++
T Consensus 195 ------------~~~~l~sg~~d-----------------~~v~~wd~~~--~~~~~~~~~h~~~v-~~v~~~p~~~~l~ 242 (340)
T 1got_B 195 ------------DTRLFVSGACD-----------------ASAKLWDVRE--GMCRQTFTGHESDI-NAICFFPNGNAFA 242 (340)
T ss_dssp ------------TSSEEEEEETT-----------------SCEEEEETTT--CSEEEEECCCSSCE-EEEEECTTSSEEE
T ss_pred ------------CCCEEEEEeCC-----------------CcEEEEECCC--CeeEEEEcCCcCCE-EEEEEcCCCCEEE
Confidence 67788888765 2344455532 111111 1112222 2334568999999
Q ss_pred EcCCCCCCCCCccccCc-CCcE-EeccCCCCCCcceeEEEEcCCCcEEEecCCC
Q 048017 373 INGASNGTAGWEDAEEP-DRRF-VVLNPSKIPRMYHSSAVVLPDGRILVGGSNP 424 (566)
Q Consensus 373 vGG~~~g~~~~~~~ydP-t~~W-t~~~~~~~~R~yhs~a~LlpdG~V~v~GG~~ 424 (566)
.|+.+ + ....||. +.+- ........ ...-.....-|||+.+++|+..
T Consensus 243 s~s~d-~---~v~iwd~~~~~~~~~~~~~~~-~~~v~~~~~s~~g~~l~~g~~d 291 (340)
T 1got_B 243 TGSDD-A---TCRLFDLRADQELMTYSHDNI-ICGITSVSFSKSGRLLLAGYDD 291 (340)
T ss_dssp EEETT-S---CEEEEETTTTEEEEEECCTTC-CSCEEEEEECTTSSEEEEEETT
T ss_pred EEcCC-C---cEEEEECCCCcEEEEEccCCc-ccceEEEEECCCCCEEEEECCC
Confidence 99876 3 2345665 2221 11111110 1112234567999999999853
No 55
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=96.28 E-value=1 Score=47.99 Aligned_cols=239 Identities=13% Similarity=0.109 Sum_probs=119.1
Q ss_pred EEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCccccccc-CcceEEEec
Q 048017 111 SVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRR-WYASNQILP 189 (566)
Q Consensus 111 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R-~y~s~~~L~ 189 (566)
+.+||.....-..+.... ....+.++.+||+.+++|+.+ ..+++||.. ...-.. +.... .-.+.+.-+
T Consensus 327 i~~w~~~~~~~~~~~~~~-~~v~~~~~s~~g~~l~~~~~d---g~v~~~~~~---~~~~~~----~~~~~~~v~~~~~s~ 395 (577)
T 2ymu_A 327 VKLWNRNGQHLQTLTGHS-SSVWGVAFSPDGQTIASASDD---KTVKLWNRN---GQLLQT----LTGHSSSVRGVAFSP 395 (577)
T ss_dssp EEEEETTSCEEEEECCCS-SCEEEEEECTTSSEEEEEETT---SEEEEEETT---CCEEEE----EECCSSCEEEEEECT
T ss_pred EEEEeCCCCeeEEEeCCC-CCEEEEEECCCCCEEEEEeCC---CEEEEEcCC---CCEEEE----ecCCCCCeEEEEECC
Confidence 567887666554443221 122234556799999998753 578889865 322211 21111 112344456
Q ss_pred CCcEEEEcCccCCeEEEEeCCCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEcC--eeEEEeccCCeEEEe
Q 048017 190 DNRIIVVGGRRVFTYEFYPKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANR--RSILFDYINNKLVKE 267 (566)
Q Consensus 190 dG~VyvvGG~~~~s~E~yP~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~--~~e~yDp~t~~W~~~ 267 (566)
||+.++.|+.+ ..+.+|..+. ... .. +..... .--.+...+|+++++.++. ...+||....... .
T Consensus 396 dg~~l~~~~~d-~~v~~~~~~~---~~~-~~-~~~~~~------~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~~-~ 462 (577)
T 2ymu_A 396 DGQTIASASDD-KTVKLWNRNG---QLL-QT-LTGHSS------SVWGVAFSPDDQTIASASDDKTVKLWNRNGQLLQ-T 462 (577)
T ss_dssp TSSCEEEEETT-SEEEEECTTC---CEE-EE-EECCSS------CEEEEEECTTSSEEEEEETTSEEEEEETTSCEEE-E
T ss_pred CCCEEEEEeCC-CEEEEEeCCC---CEE-EE-ecCCCC------CeEEEEECCCCCEEEEEcCCCEEEEEECCCCEEE-E
Confidence 89998888765 3455663221 111 11 111000 0112334579998888874 4677886544332 2
Q ss_pred ecccCCCCCCccCCCCceeeecccccCCCCCCCCCCCCCCEEEEEcCCCCCccccccccccccccCCeeEEEEeeCCCCC
Q 048017 268 FPVIPGNDKRNYPSTGSSILLPVKLSAGSDGNGTAALPDAEVMVCGGAPAGAFIKSDKESVYVEASRTCGRLKVTDKYPV 347 (566)
Q Consensus 268 ~p~lp~~~~r~~~~~g~avllpl~~~~~~~~~~y~~~~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~ 347 (566)
+. .. .. ...-+...| ++++++.|+.+ ..+..+|.. .+
T Consensus 463 ~~---~~--~~-----~v~~~~~sp-------------d~~~las~~~d-----------------~~i~iw~~~---~~ 499 (577)
T 2ymu_A 463 LT---GH--SS-----SVRGVAFSP-------------DGQTIASASDD-----------------KTVKLWNRN---GQ 499 (577)
T ss_dssp EE---CC--SS-----CEEEEEECT-------------TSCEEEEEETT-----------------SEEEEEETT---SC
T ss_pred Ec---CC--CC-----CEEEEEEcC-------------CCCEEEEEeCC-----------------CEEEEEcCC---CC
Confidence 32 11 11 111111111 67888888754 123344422 11
Q ss_pred eEEe-ccCCCcccceeEEccCCeEEEEcCCCCCCCCCccccCc-CCcEEeccCCCCCCcceeEEEEcCCCcEEEecCCC
Q 048017 348 WSME-FMPMPRVMSDMLLLPSGDVIIINGASNGTAGWEDAEEP-DRRFVVLNPSKIPRMYHSSAVVLPDGRILVGGSNP 424 (566)
Q Consensus 348 W~~~-~M~~~R~~~~~vvLpdG~V~vvGG~~~g~~~~~~~ydP-t~~Wt~~~~~~~~R~yhs~a~LlpdG~V~v~GG~~ 424 (566)
-... .-...+.. +....|||+.++.|+.+ + ....||. +.....+... . ..-......|||+.+++||.+
T Consensus 500 ~~~~~~~h~~~v~-~l~~s~dg~~l~s~~~d-g---~v~lwd~~~~~~~~~~~h--~-~~v~~~~fs~dg~~l~s~~~D 570 (577)
T 2ymu_A 500 LLQTLTGHSSSVR-GVAFSPDGQTIASASDD-K---TVKLWNRNGQLLQTLTGH--S-SSVWGVAFSPDGQTIASASSD 570 (577)
T ss_dssp EEEEEECCSSCEE-EEEECTTSSCEEEEETT-S---EEEEECTTSCEEEEEECC--S-SCEEEEEECTTSSCEEEEETT
T ss_pred EEEEEeCCCCCEE-EEEEcCCCCEEEEEECc-C---EEEEEeCCCCEEEEEcCC--C-CCEEEEEEcCCCCEEEEEeCC
Confidence 1111 21222222 23456899999998866 3 2345665 3333332211 0 111234567999999988853
No 56
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.24 E-value=0.83 Score=46.44 Aligned_cols=230 Identities=10% Similarity=0.068 Sum_probs=111.5
Q ss_pred eecC-CCcEEEEcCCCCCCCeEEEEcCCCCCCCccc-----ccCcccc-cccCcceEEEecCC-cEEEEcCccCCeEEEE
Q 048017 136 AVLS-DGTLVQTGGYNVGDRVIRLFTPCNDEGCDWV-----ELSKNLW-DRRWYASNQILPDN-RIIVVGGRRVFTYEFY 207 (566)
Q Consensus 136 ~~l~-dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~-----~~~~~M~-~~R~y~s~~~L~dG-~VyvvGG~~~~s~E~y 207 (566)
...+ ++.++++|+.+ ..+++||.. +.... .... +. ....-.+++..++| ++++.|+.++ .+.+|
T Consensus 88 ~~~p~~~~~l~s~s~d---g~v~vw~~~---~~~~~~~~~~~~~~-~~~h~~~v~~~~~~p~~~~~l~s~~~dg-~i~iw 159 (402)
T 2aq5_A 88 AWCPHNDNVIASGSED---CTVMVWEIP---DGGLVLPLREPVIT-LEGHTKRVGIVAWHPTAQNVLLSAGCDN-VILVW 159 (402)
T ss_dssp EECTTCTTEEEEEETT---SEEEEEECC---TTCCSSCBCSCSEE-EECCSSCEEEEEECSSBTTEEEEEETTS-CEEEE
T ss_pred EeCCCCCCEEEEEeCC---CeEEEEEcc---CCCCccccCCceEE-ecCCCCeEEEEEECcCCCCEEEEEcCCC-EEEEE
Confidence 3445 88999998864 579999987 44331 1111 22 12222334455677 6888887664 45666
Q ss_pred -eCCCCCCCee-eeccccccCCCCCCCCccceEEEecCCcEEEEEcC--eeEEEeccCCeEEEeecccCCCCCCccCCCC
Q 048017 208 -PKIDSLSSSL-YLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANR--RSILFDYINNKLVKEFPVIPGNDKRNYPSTG 283 (566)
Q Consensus 208 -P~~~~~~~w~-~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~--~~e~yDp~t~~W~~~~p~lp~~~~r~~~~~g 283 (566)
..+. ... .... ....+ .--.+...++|++++.|+. ...+||..+++....+. ... ... ...
T Consensus 160 d~~~~---~~~~~~~~-~~~~~------~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~--~~~--~~~-~~~ 224 (402)
T 2aq5_A 160 DVGTG---AAVLTLGP-DVHPD------TIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKD--RPH--EGT-RPV 224 (402)
T ss_dssp ETTTT---EEEEEECT-TTCCS------CEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEE--CSS--CSS-SCC
T ss_pred ECCCC---CccEEEec-CCCCC------ceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeec--cCC--CCC-cce
Confidence 3321 111 1100 11100 1112334568998888874 47789999887654331 111 110 001
Q ss_pred ceeeecccccCCCCCCCCCCCCCCEEEEEcCCCCCccccccccccccccCCeeEEEEeeCCCCCeEEeccCCCcccceeE
Q 048017 284 SSILLPVKLSAGSDGNGTAALPDAEVMVCGGAPAGAFIKSDKESVYVEASRTCGRLKVTDKYPVWSMEFMPMPRVMSDML 363 (566)
Q Consensus 284 ~avllpl~~~~~~~~~~y~~~~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~~M~~~R~~~~~v 363 (566)
..+..| +++++++|..... ...+..+|+...........+.....-....
T Consensus 225 ~~~~~~----------------~~~~l~~g~~~~~--------------d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~ 274 (402)
T 2aq5_A 225 HAVFVS----------------EGKILTTGFSRMS--------------ERQVALWDTKHLEEPLSLQELDTSSGVLLPF 274 (402)
T ss_dssp EEEECS----------------TTEEEEEEECTTC--------------CEEEEEEETTBCSSCSEEEECCCCSSCEEEE
T ss_pred EEEEcC----------------CCcEEEEeccCCC--------------CceEEEEcCccccCCceEEeccCCCceeEEE
Confidence 122211 7888888832100 1345566664321111112222222222334
Q ss_pred EccCCeEEEE-cCCCCCCCCCccccCc-CCc--EEeccCCCCCCcceeEEEEcCCCcEEEecCC
Q 048017 364 LLPSGDVIII-NGASNGTAGWEDAEEP-DRR--FVVLNPSKIPRMYHSSAVVLPDGRILVGGSN 423 (566)
Q Consensus 364 vLpdG~V~vv-GG~~~g~~~~~~~ydP-t~~--Wt~~~~~~~~R~yhs~a~LlpdG~V~v~GG~ 423 (566)
.-|||+.+++ |+.+ + ....||. +.+ ...+...... .........|||++++.+++
T Consensus 275 ~s~~~~~l~~~g~~d-g---~i~i~d~~~~~~~~~~l~~~~~~-~~v~~~~~sp~~~~~~s~~~ 333 (402)
T 2aq5_A 275 FDPDTNIVYLCGKGD-S---SIRYFEITSEAPFLHYLSMFSSK-ESQRGMGYMPKRGLEVNKCE 333 (402)
T ss_dssp EETTTTEEEEEETTC-S---CEEEEEECSSTTCEEEEEEECCS-SCCSEEEECCGGGSCGGGTE
T ss_pred EcCCCCEEEEEEcCC-C---eEEEEEecCCCcceEeecccccC-CcccceEEecccccceecce
Confidence 5688887754 4433 3 2345665 322 3333322211 11223556799998877654
No 57
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.23 E-value=0.26 Score=49.46 Aligned_cols=189 Identities=16% Similarity=0.167 Sum_probs=98.3
Q ss_pred ccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccc--cccCcceEEEecCCcEEEEcCccCCeEEEE-e
Q 048017 132 CSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLW--DRRWYASNQILPDNRIIVVGGRRVFTYEFY-P 208 (566)
Q Consensus 132 c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~--~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P 208 (566)
|...+.-+||+++++||.+ ..+++||.. +++|..... +. ....-.+++.-+||+.++.|+.++ ++.+| .
T Consensus 19 v~~l~~sp~g~~las~~~D---~~i~iw~~~---~~~~~~~~~-~~~~h~~~v~~~~~sp~g~~l~s~s~D~-~v~iw~~ 90 (345)
T 3fm0_A 19 CWFLAWNPAGTLLASCGGD---RRIRIWGTE---GDSWICKSV-LSEGHQRTVRKVAWSPCGNYLASASFDA-TTCIWKK 90 (345)
T ss_dssp EEEEEECTTSSCEEEEETT---SCEEEEEEE---TTEEEEEEE-ECSSCSSCEEEEEECTTSSEEEEEETTS-CEEEEEE
T ss_pred EEEEEECCCCCEEEEEcCC---CeEEEEEcC---CCcceeeee-eccccCCcEEEEEECCCCCEEEEEECCC-cEEEEEc
Confidence 4445566799999999864 578999987 666643221 21 122223344456899999988764 34555 3
Q ss_pred CCCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEcC--eeEEEeccCCeEEEeecccCCCCCCccCCCCcee
Q 048017 209 KIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANR--RSILFDYINNKLVKEFPVIPGNDKRNYPSTGSSI 286 (566)
Q Consensus 209 ~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~--~~e~yDp~t~~W~~~~p~lp~~~~r~~~~~g~av 286 (566)
... .......+....+ .--.+...++|++++.|+. ...+||..++.-...+..+... . ....
T Consensus 91 ~~~---~~~~~~~~~~h~~------~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h---~----~~v~ 154 (345)
T 3fm0_A 91 NQD---DFECVTTLEGHEN------EVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSH---T----QDVK 154 (345)
T ss_dssp CCC----EEEEEEECCCSS------CEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCC---C----SCEE
T ss_pred cCC---CeEEEEEccCCCC------CceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCc---C----CCeE
Confidence 221 2221111111110 0012233579999999875 4677887764321122222221 1 1111
Q ss_pred eecccccCCCCCCCCCCCCCCEEEEEcCCCCCccccccccccccccCCeeEEEEeeCCCCCeEEe-ccC--CCcccceeE
Q 048017 287 LLPVKLSAGSDGNGTAALPDAEVMVCGGAPAGAFIKSDKESVYVEASRTCGRLKVTDKYPVWSME-FMP--MPRVMSDML 363 (566)
Q Consensus 287 llpl~~~~~~~~~~y~~~~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~-~M~--~~R~~~~~v 363 (566)
-+...| ++++++.|+.+ .++..+|... ..|... .+. ..... +..
T Consensus 155 ~~~~~p-------------~~~~l~s~s~d-----------------~~i~~w~~~~--~~~~~~~~~~~h~~~v~-~l~ 201 (345)
T 3fm0_A 155 HVVWHP-------------SQELLASASYD-----------------DTVKLYREEE--DDWVCCATLEGHESTVW-SLA 201 (345)
T ss_dssp EEEECS-------------SSSCEEEEETT-----------------SCEEEEEEET--TEEEEEEEECCCSSCEE-EEE
T ss_pred EEEECC-------------CCCEEEEEeCC-----------------CcEEEEEecC--CCEEEEEEecCCCCceE-EEE
Confidence 111111 56778887764 2345566552 455533 232 22222 333
Q ss_pred EccCCeEEEEcCCC
Q 048017 364 LLPSGDVIIINGAS 377 (566)
Q Consensus 364 vLpdG~V~vvGG~~ 377 (566)
.-|+|+.++.|+.+
T Consensus 202 ~sp~g~~l~s~s~D 215 (345)
T 3fm0_A 202 FDPSGQRLASCSDD 215 (345)
T ss_dssp ECTTSSEEEEEETT
T ss_pred ECCCCCEEEEEeCC
Confidence 55899999998876
No 58
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=96.22 E-value=1 Score=44.05 Aligned_cols=128 Identities=13% Similarity=0.092 Sum_probs=67.8
Q ss_pred eEEEEECCCCcEEeCcCCCcccccCCeecCCCc-EEEEcCCCCCCCeEEEEcCCCCCCCcc-cccCcccccccCcce-EE
Q 048017 110 HSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGT-LVQTGGYNVGDRVIRLFTPCNDEGCDW-VELSKNLWDRRWYAS-NQ 186 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~-l~vvGG~~~g~~~v~~ydP~~~~t~~W-~~~~~~M~~~R~y~s-~~ 186 (566)
.+.+||+++++....-....... +.++-+||+ +|+++.. ...+.+||+. +.+. ... +........ .+
T Consensus 21 ~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~---~~~i~~~d~~---~~~~~~~~---~~~~~~~~~~~~ 90 (331)
T 3u4y_A 21 RISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDF---CQTLVQIETQ---LEPPKVVA---IQEGQSSMADVD 90 (331)
T ss_dssp EEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEEST---TCEEEEEECS---SSSCEEEE---EEECSSCCCCEE
T ss_pred eEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCC---CCeEEEEECC---CCceeEEe---cccCCCCccceE
Confidence 47889999988765433222212 445567887 5555442 3589999998 5543 111 222221222 45
Q ss_pred EecCCcEEEEcCccCC--eEEEE-eCCCCCCCee-eeccccccCCCCCCCCccc-eEEEecCCc-EEEEEc--Ce-eEEE
Q 048017 187 ILPDNRIIVVGGRRVF--TYEFY-PKIDSLSSSL-YLRFLIETRDPGEENNLYP-FLHLLPDGN-LFIFAN--RR-SILF 257 (566)
Q Consensus 187 ~L~dG~VyvvGG~~~~--s~E~y-P~~~~~~~w~-~~p~l~~~~d~~~~~~~yp-~~~~l~~G~-Ifv~Gg--~~-~e~y 257 (566)
.-+||+.++++...+. .+.+| ..+. ... ..+.- ..| .+...+||+ ||+.+. .. ..+|
T Consensus 91 ~s~dg~~l~~~~~~~~~~~i~v~d~~~~---~~~~~~~~~-----------~~~~~~~~spdg~~l~~~~~~~~~~i~~~ 156 (331)
T 3u4y_A 91 ITPDDQFAVTVTGLNHPFNMQSYSFLKN---KFISTIPIP-----------YDAVGIAISPNGNGLILIDRSSANTVRRF 156 (331)
T ss_dssp ECTTSSEEEECCCSSSSCEEEEEETTTT---EEEEEEECC-----------TTEEEEEECTTSSCEEEEEETTTTEEEEE
T ss_pred ECCCCCEEEEecCCCCcccEEEEECCCC---CeEEEEECC-----------CCccceEECCCCCEEEEEecCCCceEEEE
Confidence 5578876555544333 67777 4332 111 11110 112 334567887 776643 34 6677
Q ss_pred eccC
Q 048017 258 DYIN 261 (566)
Q Consensus 258 Dp~t 261 (566)
|...
T Consensus 157 ~~~~ 160 (331)
T 3u4y_A 157 KIDA 160 (331)
T ss_dssp EECT
T ss_pred EECC
Confidence 7654
No 59
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.22 E-value=0.072 Score=53.67 Aligned_cols=113 Identities=15% Similarity=0.156 Sum_probs=59.2
Q ss_pred CeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCccccccc-CcceEEEecCCcEEEEcCccCCeEEEE-eCCCC
Q 048017 135 GAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRR-WYASNQILPDNRIIVVGGRRVFTYEFY-PKIDS 212 (566)
Q Consensus 135 ~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R-~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~ 212 (566)
...-+||+++++|+.+ ..+++||.. +..|..... +.... .-.+.+..+||+.++.|+.++ .+.+| ..+.
T Consensus 17 ~~~s~~g~~l~~~~~d---~~i~iw~~~---~~~~~~~~~-~~~h~~~v~~~~~s~~~~~l~s~s~d~-~v~vwd~~~~- 87 (377)
T 3dwl_C 17 HAFNSQRTEFVTTTAT---NQVELYEQD---GNGWKHART-FSDHDKIVTCVDWAPKSNRIVTCSQDR-NAYVYEKRPD- 87 (377)
T ss_dssp CEECSSSSEEECCCSS---SCBCEEEEE---TTEEEECCC-BCCCSSCEEEEEECTTTCCEEEEETTS-SEEEC------
T ss_pred EEECCCCCEEEEecCC---CEEEEEEcc---CCceEEEEE-EecCCceEEEEEEeCCCCEEEEEeCCC-eEEEEEcCCC-
Confidence 3445689999998864 467888887 666665554 44222 223444556889888888654 45555 3321
Q ss_pred CCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEcC--eeEEEeccCCe
Q 048017 213 LSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANR--RSILFDYINNK 263 (566)
Q Consensus 213 ~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~--~~e~yDp~t~~ 263 (566)
..+.....+....+ .--.+...++|++++.|+. ...+||..+++
T Consensus 88 -~~~~~~~~~~~~~~------~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 133 (377)
T 3dwl_C 88 -GTWKQTLVLLRLNR------AATFVRWSPNEDKFAVGSGARVISVCYFEQEN 133 (377)
T ss_dssp --CCCCEEECCCCSS------CEEEEECCTTSSCCEEEESSSCEEECCC----
T ss_pred -CceeeeeEecccCC------ceEEEEECCCCCEEEEEecCCeEEEEEECCcc
Confidence 11211111111100 0011223468888888875 46778887764
No 60
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=96.20 E-value=0.95 Score=43.51 Aligned_cols=218 Identities=13% Similarity=0.175 Sum_probs=105.6
Q ss_pred ecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCccc--ccccCcceEEEe--cCCcEEEEcCccCCeEEEEeCCCC
Q 048017 137 VLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNL--WDRRWYASNQIL--PDNRIIVVGGRRVFTYEFYPKIDS 212 (566)
Q Consensus 137 ~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M--~~~R~y~s~~~L--~dG~VyvvGG~~~~s~E~yP~~~~ 212 (566)
+-.+|++|++... ...+.+||+. ..........- ...-..+....+ .+|++||.+......+.+|..+.
T Consensus 37 ~~~~g~l~v~~~~---~~~i~~~d~~---g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g- 109 (286)
T 1q7f_A 37 VNAQNDIIVADTN---NHRIQIFDKE---GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYG- 109 (286)
T ss_dssp ECTTCCEEEEEGG---GTEEEEECTT---SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTTS-
T ss_pred ECCCCCEEEEECC---CCEEEEECCC---CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEECCCC-
Confidence 3457898888543 2568899987 33222221100 011123444444 58999998754233455552211
Q ss_pred CCCeeeeccccccCCCCCCCCccceEE-EecCCcEEEEEc--CeeEEEeccCCeEEEeecccCCCCCCccCCCCceeeec
Q 048017 213 LSSSLYLRFLIETRDPGEENNLYPFLH-LLPDGNLFIFAN--RRSILFDYINNKLVKEFPVIPGNDKRNYPSTGSSILLP 289 (566)
Q Consensus 213 ~~~w~~~p~l~~~~d~~~~~~~yp~~~-~l~~G~Ifv~Gg--~~~e~yDp~t~~W~~~~p~lp~~~~r~~~~~g~avllp 289 (566)
........ . ....|... +.++|+||+... ....+||+...... .+.. +.. -..|. + .++
T Consensus 110 -~~~~~~~~--~-------~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~-~~~~-~~~--~~~p~-~-i~~-- 171 (286)
T 1q7f_A 110 -QFVRKFGA--T-------ILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLH-KFGC-SKH--LEFPN-G-VVV-- 171 (286)
T ss_dssp -CEEEEECT--T-------TCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEE-EEEC-TTT--CSSEE-E-EEE--
T ss_pred -cEEEEecC--c-------cCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEE-EeCC-CCc--cCCcE-E-EEE--
Confidence 01111111 0 01234433 447899998763 45788998765433 3321 111 11121 1 111
Q ss_pred ccccCCCCCCCCCCCCCCEEEEEcCCCCCccccccccccccccCCeeEEEEeeCCCCCeEEe-c----cCCCcccceeEE
Q 048017 290 VKLSAGSDGNGTAALPDAEVMVCGGAPAGAFIKSDKESVYVEASRTCGRLKVTDKYPVWSME-F----MPMPRVMSDMLL 364 (566)
Q Consensus 290 l~~~~~~~~~~y~~~~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~-~----M~~~R~~~~~vv 364 (566)
. .+++||+....+ ..+.+||+. .+.... . +..++ +.++
T Consensus 172 -~-------------~~g~l~v~~~~~-----------------~~i~~~~~~---g~~~~~~~~~g~~~~p~---~i~~ 214 (286)
T 1q7f_A 172 -N-------------DKQEIFISDNRA-----------------HCVKVFNYE---GQYLRQIGGEGITNYPI---GVGI 214 (286)
T ss_dssp -C-------------SSSEEEEEEGGG-----------------TEEEEEETT---CCEEEEESCTTTSCSEE---EEEE
T ss_pred -C-------------CCCCEEEEECCC-----------------CEEEEEcCC---CCEEEEEccCCccCCCc---EEEE
Confidence 1 168898875421 345666653 222211 1 22222 3345
Q ss_pred ccCCeEEEEcCCCCCCCCCccccCc-CCcEEeccC-CCCCCcceeEEEEcCCCcEEEec
Q 048017 365 LPSGDVIIINGASNGTAGWEDAEEP-DRRFVVLNP-SKIPRMYHSSAVVLPDGRILVGG 421 (566)
Q Consensus 365 LpdG~V~vvGG~~~g~~~~~~~ydP-t~~Wt~~~~-~~~~R~yhs~a~LlpdG~V~v~G 421 (566)
-++|+|||....+.+ ....||+ +.....+.. .... .-++. .+.+||++||+.
T Consensus 215 d~~G~l~v~~~~~~~---~i~~~~~~g~~~~~~~~~~~~~-~~~~i-~~~~~g~l~vs~ 268 (286)
T 1q7f_A 215 NSNGEILIADNHNNF---NLTIFTQDGQLISALESKVKHA-QCFDV-ALMDDGSVVLAS 268 (286)
T ss_dssp CTTCCEEEEECSSSC---EEEEECTTSCEEEEEEESSCCS-CEEEE-EEETTTEEEEEE
T ss_pred CCCCCEEEEeCCCCE---EEEEECCCCCEEEEEcccCCCC-cceeE-EECCCCcEEEEC
Confidence 589999998754311 2356888 433333221 1111 12333 446899999984
No 61
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.18 E-value=0.34 Score=48.90 Aligned_cols=150 Identities=13% Similarity=0.063 Sum_probs=74.3
Q ss_pred EEeeCCeEEEEeccCCCCCCCCCCCCccccCCCCCCCcccceEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcC
Q 048017 69 QVLNNDKVIIFDRTDMGPSNLSLPIDKCRKEGDVGQLDCTAHSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGG 148 (566)
Q Consensus 69 ~~l~~gkV~~~gg~~~~~s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG 148 (566)
...++|++++.|+.+ | .+.+||........+.. +..........++|+.+++|+
T Consensus 115 ~~s~~~~~l~~~~~d----------g---------------~i~i~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~ 168 (425)
T 1r5m_A 115 AWSHDGNSIVTGVEN----------G---------------ELRLWNKTGALLNVLNF-HRAPIVSVKWNKDGTHIISMD 168 (425)
T ss_dssp EECTTSSEEEEEETT----------S---------------CEEEEETTSCEEEEECC-CCSCEEEEEECTTSSEEEEEE
T ss_pred EEcCCCCEEEEEeCC----------C---------------eEEEEeCCCCeeeeccC-CCccEEEEEECCCCCEEEEEe
Confidence 344688888887653 1 26678844433333332 222222344557899888887
Q ss_pred CCCCCCeEEEEcCCCCCCCcccccCcccccc--------------cCcceEEEecCCcEEEEcCccCCeEEEE-eCCCCC
Q 048017 149 YNVGDRVIRLFTPCNDEGCDWVELSKNLWDR--------------RWYASNQILPDNRIIVVGGRRVFTYEFY-PKIDSL 213 (566)
Q Consensus 149 ~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~--------------R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~ 213 (566)
.+ ..+.+||.. +.+....-. .... ..-.+.+..+++ .+++|+.++ .+.+| ....
T Consensus 169 ~d---~~i~iwd~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g-~i~~~d~~~~-- 237 (425)
T 1r5m_A 169 VE---NVTILWNVI---SGTVMQHFE-LKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKG-AIFVYQITEK-- 237 (425)
T ss_dssp TT---CCEEEEETT---TTEEEEEEC-CC---------------CCCBSCCEEEETT-EEEEECGGG-CEEEEETTCS--
T ss_pred cC---CeEEEEECC---CCcEEEEee-ccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCC-eEEEEEcCCC--
Confidence 53 467888876 333221100 0100 002234444454 466777654 35556 3321
Q ss_pred CCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEcC--eeEEEeccCCeE
Q 048017 214 SSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANR--RSILFDYINNKL 264 (566)
Q Consensus 214 ~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~--~~e~yDp~t~~W 264 (566)
....... ... ..--.+...++|++++.|+. ...+||..+.+.
T Consensus 238 ~~~~~~~---~~~------~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 281 (425)
T 1r5m_A 238 TPTGKLI---GHH------GPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNS 281 (425)
T ss_dssp SCSEEEC---CCS------SCEEEEEEETTTTEEEEEETTSCEEEECSSSBSC
T ss_pred ceeeeec---cCC------CceEEEEECCCCCEEEEEcCCCEEEEEECCCCcc
Confidence 0111111 000 00112334578988888874 467888877543
No 62
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.16 E-value=1.2 Score=45.81 Aligned_cols=131 Identities=11% Similarity=0.114 Sum_probs=67.8
Q ss_pred eEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEec
Q 048017 110 HSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILP 189 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~ 189 (566)
.+.+||..+++....-..+.. ....+..++..+++|+.+ ..+.+||.. +.+-.. . +........+...
T Consensus 180 ~i~vwd~~~~~~~~~~~~h~~--~v~~~~~~~~~l~s~s~d---g~i~~wd~~---~~~~~~--~-~~~~~~~v~~~~~- 247 (445)
T 2ovr_B 180 TLKVWNAETGECIHTLYGHTS--TVRCMHLHEKRVVSGSRD---ATLRVWDIE---TGQCLH--V-LMGHVAAVRCVQY- 247 (445)
T ss_dssp CEEEEETTTTEEEEEECCCSS--CEEEEEEETTEEEEEETT---SEEEEEESS---SCCEEE--E-EECCSSCEEEEEE-
T ss_pred eEEEEECCcCcEEEEECCCCC--cEEEEEecCCEEEEEeCC---CEEEEEECC---CCcEEE--E-EcCCcccEEEEEE-
Confidence 467888877754322111111 111222367778888754 578999987 433211 1 2222222233444
Q ss_pred CCcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEcC--eeEEEeccCCeEEE
Q 048017 190 DNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANR--RSILFDYINNKLVK 266 (566)
Q Consensus 190 dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~--~~e~yDp~t~~W~~ 266 (566)
+|+.+++|+.++ .+.+| ..+. .. ... +... ..+...+..+|+.++.|+. ...+||..+++-..
T Consensus 248 ~~~~l~~~~~dg-~i~iwd~~~~---~~-~~~-~~~~--------~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 313 (445)
T 2ovr_B 248 DGRRVVSGAYDF-MVKVWDPETE---TC-LHT-LQGH--------TNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIH 313 (445)
T ss_dssp CSSCEEEEETTS-CEEEEEGGGT---EE-EEE-ECCC--------SSCEEEEEECSSEEEEEETTSCEEEEETTTCCEEE
T ss_pred CCCEEEEEcCCC-EEEEEECCCC---cE-eEE-ecCC--------CCceEEEEECCCEEEEEeCCCeEEEEECCCCCEEE
Confidence 888888888764 45555 3321 11 111 1110 0112233448888888874 46789998877543
No 63
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.10 E-value=0.49 Score=46.88 Aligned_cols=238 Identities=13% Similarity=0.081 Sum_probs=114.2
Q ss_pred ecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEe-cC--CcEEEEcCccCCeEEEE-eCCCC
Q 048017 137 VLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQIL-PD--NRIIVVGGRRVFTYEFY-PKIDS 212 (566)
Q Consensus 137 ~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L-~d--G~VyvvGG~~~~s~E~y-P~~~~ 212 (566)
+.+||+.+++|+.+ ..+.+||.. ..++..... +......-..... ++ ++.++.|+.++ .+.+| ..+.
T Consensus 19 ~s~~~~~l~~~~~d---g~i~iw~~~---~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~~l~s~~~dg-~v~iwd~~~~- 89 (379)
T 3jrp_A 19 LDYYGKRLATCSSD---KTIKIFEVE---GETHKLIDT-LTGHEGPVWRVDWAHPKFGTILASCSYDG-KVLIWKEENG- 89 (379)
T ss_dssp ECSSSSEEEEEETT---SCEEEEEEE---TTEEEEEEE-ECCCSSCEEEEEECCGGGCSEEEEEETTS-CEEEEEEETT-
T ss_pred EcCCCCEEEEEECC---CcEEEEecC---CCcceeeeE-ecCCCCcEEEEEeCCCCCCCEEEEeccCC-EEEEEEcCCC-
Confidence 44688999998754 468888876 445544433 3322222223333 44 88988888764 45556 3321
Q ss_pred CCCeeeeccccccCCCCCCCCccceEEEecC--CcEEEEEcC--eeEEEeccCCeEEEeecccCCCCCCccCCCCceeee
Q 048017 213 LSSSLYLRFLIETRDPGEENNLYPFLHLLPD--GNLFIFANR--RSILFDYINNKLVKEFPVIPGNDKRNYPSTGSSILL 288 (566)
Q Consensus 213 ~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~--G~Ifv~Gg~--~~e~yDp~t~~W~~~~p~lp~~~~r~~~~~g~avll 288 (566)
.+.....+..... .--.+...++ |++++.|+. ...+||..++...... .+... . .....+
T Consensus 90 --~~~~~~~~~~~~~------~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~-~~~~~---~----~~v~~~ 153 (379)
T 3jrp_A 90 --RWSQIAVHAVHSA------SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPI-IIDAH---A----IGVNSA 153 (379)
T ss_dssp --EEEEEEEECCCSS------CEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEE-EEECC---T----TCEEEE
T ss_pred --ceeEeeeecCCCc------ceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeE-EecCC---C----CceEEE
Confidence 2222111111100 0112233456 888888875 4677888776321111 01111 0 001111
Q ss_pred cccccCC-CC--CCCCCCCCCCEEEEEcCCCCCccccccccccccccCCeeEEEEeeCCCCCeEEe-ccCCCc-ccceeE
Q 048017 289 PVKLSAG-SD--GNGTAALPDAEVMVCGGAPAGAFIKSDKESVYVEASRTCGRLKVTDKYPVWSME-FMPMPR-VMSDML 363 (566)
Q Consensus 289 pl~~~~~-~~--~~~y~~~~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~-~M~~~R-~~~~~v 363 (566)
...|... .+ .... .+++.+++|+.+ ..+..+|+......|... .+.... .-.+..
T Consensus 154 ~~~~~~~~~~~~~~~~---~~~~~l~~~~~d-----------------g~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~ 213 (379)
T 3jrp_A 154 SWAPATIEEDGEHNGT---KESRKFVTGGAD-----------------NLVKIWKYNSDAQTYVLESTLEGHSDWVRDVA 213 (379)
T ss_dssp EECCCC-------------CTTCEEEEEETT-----------------SCEEEEEEETTTTEEEEEEEECCCSSCEEEEE
T ss_pred EEcCccccccccccCC---CCCCEEEEEeCC-----------------CeEEEEEecCCCcceeeEEEEecccCcEeEEE
Confidence 1111000 00 0000 036777777754 235667776544556544 333222 122334
Q ss_pred EccC---CeEEEEcCCCCCCCCCccccCc-CC--cEE--eccCCCCCCcceeEEEEcCCCcEEEecCCC
Q 048017 364 LLPS---GDVIIINGASNGTAGWEDAEEP-DR--RFV--VLNPSKIPRMYHSSAVVLPDGRILVGGSNP 424 (566)
Q Consensus 364 vLpd---G~V~vvGG~~~g~~~~~~~ydP-t~--~Wt--~~~~~~~~R~yhs~a~LlpdG~V~v~GG~~ 424 (566)
.-|+ ++++++|+.+ + ....||. +. .+. ......... .-......|||+.+++|+..
T Consensus 214 ~sp~~~~~~~l~s~~~d-g---~i~iwd~~~~~~~~~~~~~~~~~~~~-~v~~~~~s~~g~~l~~~~~d 277 (379)
T 3jrp_A 214 WSPTVLLRSYLASVSQD-R---TCIIWTQDNEQGPWKKTLLKEEKFPD-VLWRASWSLSGNVLALSGGD 277 (379)
T ss_dssp ECCCCSSSEEEEEEETT-S---CEEEEEESSTTSCCEEEESSSSCCSS-CEEEEEECSSSCCEEEEESS
T ss_pred ECCCCCCCCeEEEEeCC-C---EEEEEeCCCCCccceeeeeccccCCC-cEEEEEEcCCCCEEEEecCC
Confidence 5688 8999998876 3 2345665 22 222 222211222 22334567999999988863
No 64
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=96.07 E-value=1.4 Score=44.34 Aligned_cols=227 Identities=15% Similarity=0.160 Sum_probs=114.4
Q ss_pred ecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEecCCcEEEEcCccCCeEEEEeCC-CCCCC
Q 048017 137 VLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILPDNRIIVVGGRRVFTYEFYPKI-DSLSS 215 (566)
Q Consensus 137 ~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~yP~~-~~~~~ 215 (566)
..+||+.+++||.+ ..+++||.. +.+....-. + ...+-.+++.-++|+.++.||.++ .+.+|+.. +....
T Consensus 72 ~s~d~~~l~s~s~D---g~v~vWd~~---~~~~~~~~~-~-~~~~v~~~~~sp~g~~lasg~~d~-~i~v~~~~~~~~~~ 142 (354)
T 2pbi_B 72 WCKDKRRIVSSSQD---GKVIVWDSF---TTNKEHAVT-M-PCTWVMACAYAPSGCAIACGGLDN-KCSVYPLTFDKNEN 142 (354)
T ss_dssp ECTTSSEEEEEETT---SEEEEEETT---TCCEEEEEE-C-SSSCCCEEEECTTSSEEEEESTTS-EEEEEECCCCTTCC
T ss_pred ECCCCCEEEEEeCC---CeEEEEECC---CCCcceEEe-c-CCCCEEEEEECCCCCEEEEeeCCC-CEEEEEEecccccc
Confidence 44689999999864 578999976 433322111 1 223445566678999999999764 45566221 10000
Q ss_pred e-eeeccccccCCCCCCCCccceEEEecCCcEEEEEcC--eeEEEeccCCeEEEeecccCCCCCCccCCCCceeeecccc
Q 048017 216 S-LYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANR--RSILFDYINNKLVKEFPVIPGNDKRNYPSTGSSILLPVKL 292 (566)
Q Consensus 216 w-~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~--~~e~yDp~t~~W~~~~p~lp~~~~r~~~~~g~avllpl~~ 292 (566)
. .....+....+ .--.+...++++.++.|+. .+.+||..+++..+.+ ... . +....+.+.+
T Consensus 143 ~~~~~~~~~~h~~------~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~---~~h---~----~~v~~~~~~~ 206 (354)
T 2pbi_B 143 MAAKKKSVAMHTN------YLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSF---HGH---G----ADVLCLDLAP 206 (354)
T ss_dssp SGGGCEEEEECSS------CEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEE---ECC---S----SCEEEEEECC
T ss_pred ccccceeeeccCC------cEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEE---cCC---C----CCeEEEEEEe
Confidence 0 00000111100 0012233467777766653 4678999988755333 221 0 1111111111
Q ss_pred cCCCCCCCCCCCCCCEEEEEcCCCCCccccccccccccccCCeeEEEEeeCCCCCeEEe-ccCCCcccceeEEccCCeEE
Q 048017 293 SAGSDGNGTAALPDAEVMVCGGAPAGAFIKSDKESVYVEASRTCGRLKVTDKYPVWSME-FMPMPRVMSDMLLLPSGDVI 371 (566)
Q Consensus 293 ~~~~~~~~y~~~~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~~vvLpdG~V~ 371 (566)
. . +++.++.|+.++ .+..+|+.. .+.... ........ +....|+|+.+
T Consensus 207 ~--------~---~g~~l~sgs~Dg-----------------~v~~wd~~~--~~~~~~~~~h~~~v~-~v~~~p~~~~l 255 (354)
T 2pbi_B 207 S--------E---TGNTFVSGGCDK-----------------KAMVWDMRS--GQCVQAFETHESDVN-SVRYYPSGDAF 255 (354)
T ss_dssp C--------S---SCCEEEEEETTS-----------------CEEEEETTT--CCEEEEECCCSSCEE-EEEECTTSSEE
T ss_pred C--------C---CCCEEEEEeCCC-----------------eEEEEECCC--CcEEEEecCCCCCeE-EEEEeCCCCEE
Confidence 1 0 467888887652 344556542 222221 22222222 33456899999
Q ss_pred EEcCCCCCCCCCccccCc-CCc-EEeccCCCCCCcceeEEEEcCCCcEEEecCCC
Q 048017 372 IINGASNGTAGWEDAEEP-DRR-FVVLNPSKIPRMYHSSAVVLPDGRILVGGSNP 424 (566)
Q Consensus 372 vvGG~~~g~~~~~~~ydP-t~~-Wt~~~~~~~~R~yhs~a~LlpdG~V~v~GG~~ 424 (566)
+.|+.+ + ....||. +++ -....... ..........-|||+++++|+..
T Consensus 256 ~s~s~D-~---~v~lwd~~~~~~~~~~~~~~-~~~~~~~~~~s~~g~~l~~g~~d 305 (354)
T 2pbi_B 256 ASGSDD-A---TCRLYDLRADREVAIYSKES-IIFGASSVDFSLSGRLLFAGYND 305 (354)
T ss_dssp EEEETT-S---CEEEEETTTTEEEEEECCTT-CCSCEEEEEECTTSSEEEEEETT
T ss_pred EEEeCC-C---eEEEEECCCCcEEEEEcCCC-cccceeEEEEeCCCCEEEEEECC
Confidence 999876 3 2345665 322 11111111 11122345567999999998853
No 65
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=95.98 E-value=1.3 Score=43.07 Aligned_cols=137 Identities=15% Similarity=0.229 Sum_probs=73.9
Q ss_pred eEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCccccccc-CcceEEEe
Q 048017 110 HSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRR-WYASNQIL 188 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R-~y~s~~~L 188 (566)
.+.+||..+++-...-..+..........++++++++|+.+ ..+++||.. +.+-. .. +.... .-.+.+.-
T Consensus 88 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---~~i~iwd~~---~~~~~--~~-~~~~~~~v~~~~~~ 158 (312)
T 4ery_A 88 TLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD---ESVRIWDVK---TGKCL--KT-LPAHSDPVSAVHFN 158 (312)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETT---SCEEEEETT---TCCEE--EE-ECCCSSCEEEEEEC
T ss_pred EEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCC---CcEEEEECC---CCEEE--EE-ecCCCCcEEEEEEc
Confidence 36789988876433211122111223455789999998864 568999987 43321 11 22211 12233444
Q ss_pred cCCcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEcC--eeEEEeccCCeEE
Q 048017 189 PDNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANR--RSILFDYINNKLV 265 (566)
Q Consensus 189 ~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~--~~e~yDp~t~~W~ 265 (566)
++|+.++.|+.++ .+.+| ..+. ... ..+..... ..--.+...++|+.++.|+. ...+||..+.+-.
T Consensus 159 ~~~~~l~~~~~d~-~i~~wd~~~~---~~~-~~~~~~~~------~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 227 (312)
T 4ery_A 159 RDGSLIVSSSYDG-LCRIWDTASG---QCL-KTLIDDDN------PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 227 (312)
T ss_dssp TTSSEEEEEETTS-CEEEEETTTC---CEE-EEECCSSC------CCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEE
T ss_pred CCCCEEEEEeCCC-cEEEEECCCC---cee-eEEeccCC------CceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEE
Confidence 6899999888764 45566 3321 111 11110000 00112334578998888874 4678999888754
Q ss_pred E
Q 048017 266 K 266 (566)
Q Consensus 266 ~ 266 (566)
+
T Consensus 228 ~ 228 (312)
T 4ery_A 228 K 228 (312)
T ss_dssp E
T ss_pred E
Confidence 3
No 66
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=95.97 E-value=1.1 Score=42.32 Aligned_cols=134 Identities=13% Similarity=0.011 Sum_probs=66.9
Q ss_pred EEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEecC
Q 048017 111 SVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILPD 190 (566)
Q Consensus 111 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~d 190 (566)
+.+||+.+...............+.++..+|+||+... ...+.+||+. +........ .....-.+.+.-++
T Consensus 48 i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~----~~~i~~~d~~---~~~~~~~~~--~~~~~p~~i~~~~~ 118 (270)
T 1rwi_B 48 VVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF----NNRVVTLAAG---SNNQTVLPF--DGLNYPEGLAVDTQ 118 (270)
T ss_dssp EEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET----TTEEEEECTT---CSCCEECCC--CSCSSEEEEEECTT
T ss_pred EEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC----CCEEEEEeCC---CceEeeeec--CCcCCCcceEECCC
Confidence 56788777665544322212223344556899998865 2478899997 443332221 11112223445568
Q ss_pred CcEEEEcCccCCeEEEEeCCCCCCCeeeeccccccCCCCCCCCccce-EEEecCCcEEEEEc--CeeEEEeccCCeEE
Q 048017 191 NRIIVVGGRRVFTYEFYPKIDSLSSSLYLRFLIETRDPGEENNLYPF-LHLLPDGNLFIFAN--RRSILFDYINNKLV 265 (566)
Q Consensus 191 G~VyvvGG~~~~s~E~yP~~~~~~~w~~~p~l~~~~d~~~~~~~yp~-~~~l~~G~Ifv~Gg--~~~e~yDp~t~~W~ 265 (566)
|++|+....+ ..+.+|.... ......... . ...|. ...-++|+||+... ....+||+.+....
T Consensus 119 g~l~v~~~~~-~~i~~~~~~~--~~~~~~~~~-~--------~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~ 184 (270)
T 1rwi_B 119 GAVYVADRGN-NRVVKLAAGS--KTQTVLPFT-G--------LNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQV 184 (270)
T ss_dssp CCEEEEEGGG-TEEEEECTTC--CSCEECCCC-S--------CCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEE
T ss_pred CCEEEEECCC-CEEEEEECCC--ceeEeeccc-c--------CCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceE
Confidence 9999875433 2344552211 011111100 0 01233 33446899998754 46788999887644
No 67
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=95.92 E-value=0.48 Score=50.69 Aligned_cols=153 Identities=7% Similarity=-0.065 Sum_probs=80.3
Q ss_pred EEEeeCCeEEEEeccCCCCCCCCCCCCccccCCCCCCCcccceEEEEECCCC----c-EEeCcCCCccc-ccCCeecC--
Q 048017 68 MQVLNNDKVIIFDRTDMGPSNLSLPIDKCRKEGDVGQLDCTAHSVLYDIASN----T-FRPLLLQTDTW-CSSGAVLS-- 139 (566)
Q Consensus 68 ~~~l~~gkV~~~gg~~~~~s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp~t~----~-w~~l~~~~~~~-c~~~~~l~-- 139 (566)
.+.-++|+.+++++ + ..+.+||..+. + -..+.. +... -.+.+..+
T Consensus 24 ~~~spdg~~l~~~~-~-------------------------~~v~v~~~~~~~~~~~~~~~~~~-h~~~~v~~~~~sp~~ 76 (615)
T 1pgu_A 24 LSYDPTTNAIAYPC-G-------------------------KSAFVRCLDDGDSKVPPVVQFTG-HGSSVVTTVKFSPIK 76 (615)
T ss_dssp CEEETTTTEEEEEE-T-------------------------TEEEEEECCSSCCSSCSEEEECT-TTTSCEEEEEECSST
T ss_pred EEECCCCCEEEEec-C-------------------------CeEEEEECCCCCCccccceEEec-CCCceEEEEEECcCC
Confidence 44456888888876 2 13678888765 3 222221 1111 22345567
Q ss_pred CCcEEEEcCCCCCCCeEEEEcCCCCCCC------cccccCcccc-cccCcceEEEecCCcEEEEcCccCC---eEEEEeC
Q 048017 140 DGTLVQTGGYNVGDRVIRLFTPCNDEGC------DWVELSKNLW-DRRWYASNQILPDNRIIVVGGRRVF---TYEFYPK 209 (566)
Q Consensus 140 dG~l~vvGG~~~g~~~v~~ydP~~~~t~------~W~~~~~~M~-~~R~y~s~~~L~dG~VyvvGG~~~~---s~E~yP~ 209 (566)
||+++++|+.+ ..+++||.. +. ....... +. ....-.+.+.-+||+.+++++.+.. .+.+|.
T Consensus 77 ~~~~l~s~~~d---g~v~vw~~~---~~~~~~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d- 148 (615)
T 1pgu_A 77 GSQYLCSGDES---GKVIVWGWT---FDKESNSVEVNVKSE-FQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD- 148 (615)
T ss_dssp TCCEEEEEETT---SEEEEEEEE---EEGGGTEEEEEEEEE-EECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT-
T ss_pred CCCEEEEecCC---CEEEEEeCC---CCcccccccccccch-hhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE-
Confidence 99999999864 578888875 32 2222221 22 1223334555678999988886531 222332
Q ss_pred CCCCCCeeeeccccccCCCCCCCCccceEEEecCCc-EEEEEcC--eeEEEeccCCeEEE
Q 048017 210 IDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGN-LFIFANR--RSILFDYINNKLVK 266 (566)
Q Consensus 210 ~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~-Ifv~Gg~--~~e~yDp~t~~W~~ 266 (566)
.. .. ... +.... ..--.+...++|+ +++.|+. ...+||..+.+...
T Consensus 149 ~~---~~-~~~-~~~~~------~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~ 197 (615)
T 1pgu_A 149 SG---NS-LGE-VSGHS------QRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSA 197 (615)
T ss_dssp TC---CE-EEE-CCSCS------SCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEE
T ss_pred CC---Cc-cee-eecCC------ccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceee
Confidence 11 11 111 11100 0111233456776 6777764 46789988876543
No 68
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=95.85 E-value=1.8 Score=44.62 Aligned_cols=133 Identities=11% Similarity=0.113 Sum_probs=70.0
Q ss_pred EEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEecC
Q 048017 111 SVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILPD 190 (566)
Q Consensus 111 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~d 190 (566)
+.+||..+.+....-..+.. .-..+..+++++++|+.+ ..+.+||.. +.+-. .. +......-..... +
T Consensus 155 i~iwd~~~~~~~~~~~~h~~--~v~~l~~~~~~l~sg~~d---g~i~vwd~~---~~~~~--~~-~~~h~~~v~~l~~-~ 222 (435)
T 1p22_A 155 IKIWDKNTLECKRILTGHTG--SVLCLQYDERVIITGSSD---STVRVWDVN---TGEML--NT-LIHHCEAVLHLRF-N 222 (435)
T ss_dssp EEEEESSSCCEEEEECCCSS--CEEEEECCSSEEEEEETT---SCEEEEESS---SCCEE--EE-ECCCCSCEEEEEC-C
T ss_pred EEEEeCCCCeEEEEEcCCCC--cEEEEEECCCEEEEEcCC---CeEEEEECC---CCcEE--EE-EcCCCCcEEEEEE-c
Confidence 67899887765432221111 111222389999999864 578999987 44322 11 2222222233444 5
Q ss_pred CcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEcC--eeEEEeccCCeEEE
Q 048017 191 NRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANR--RSILFDYINNKLVK 266 (566)
Q Consensus 191 G~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~--~~e~yDp~t~~W~~ 266 (566)
+..++.|+.++ .+.+| ..+. ........+... ..+...+..+|+.++.|+. ...+||..+++-..
T Consensus 223 ~~~l~s~s~dg-~i~vwd~~~~--~~~~~~~~~~~~--------~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 290 (435)
T 1p22_A 223 NGMMVTCSKDR-SIAVWDMASP--TDITLRRVLVGH--------RAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVR 290 (435)
T ss_dssp TTEEEEEETTS-CEEEEECSSS--SCCEEEEEECCC--------SSCEEEEEEETTEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCEEEEeeCCC-cEEEEeCCCC--CCceeeeEecCC--------CCcEEEEEeCCCEEEEEeCCCeEEEEECCcCcEEE
Confidence 67777777654 45566 3321 111111111111 1122334448888888874 46789998876553
No 69
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=95.77 E-value=2 Score=46.77 Aligned_cols=136 Identities=14% Similarity=0.057 Sum_probs=69.3
Q ss_pred eEEEEECCCCcEEe-CcC------CCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccc-cC
Q 048017 110 HSVLYDIASNTFRP-LLL------QTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDR-RW 181 (566)
Q Consensus 110 ~~~~yDp~t~~w~~-l~~------~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~-R~ 181 (566)
.+.+||..+++... +.. .+.....+.++.+||+.+++|+.+ +.+++||.. +.+....-. +... ..
T Consensus 213 ~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D---~~v~lWd~~---~~~~~~~~~-~~~~~~~ 285 (611)
T 1nr0_A 213 TIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD---KTIKIWNVA---TLKVEKTIP-VGTRIED 285 (611)
T ss_dssp CEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETT---SEEEEEETT---TTEEEEEEE-CCSSGGG
T ss_pred cEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCC---CeEEEEeCC---CCceeeeec-CCCCccc
Confidence 36788888776543 211 122222234456799999999864 689999987 544432111 1100 00
Q ss_pred cceEEEecCCcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEcC--eeEEEe
Q 048017 182 YASNQILPDNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANR--RSILFD 258 (566)
Q Consensus 182 y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~--~~e~yD 258 (566)
....+.. +++.++.++.++ .+.+| +... .. ...+....+ .--.+...+||+.++.|+. ...+||
T Consensus 286 ~~~~~~~-~~~~l~s~s~d~-~i~~~~~~~~---~~--~~~~~gh~~------~v~~l~~spdg~~l~s~s~D~~v~~Wd 352 (611)
T 1nr0_A 286 QQLGIIW-TKQALVSISANG-FINFVNPELG---SI--DQVRYGHNK------AITALSSSADGKTLFSADAEGHINSWD 352 (611)
T ss_dssp CEEEEEE-CSSCEEEEETTC-CEEEEETTTT---EE--EEEECCCSS------CEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eeEEEEE-cCCEEEEEeCCC-cEEEEeCCCC---Cc--ceEEcCCCC------CEEEEEEeCCCCEEEEEeCCCcEEEEE
Confidence 1112223 677777776553 44555 3321 11 111111100 0112234578988888874 466788
Q ss_pred ccCCeEE
Q 048017 259 YINNKLV 265 (566)
Q Consensus 259 p~t~~W~ 265 (566)
..+++..
T Consensus 353 ~~~~~~~ 359 (611)
T 1nr0_A 353 ISTGISN 359 (611)
T ss_dssp TTTCCEE
T ss_pred CCCCcee
Confidence 7766543
No 70
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=95.76 E-value=1.9 Score=43.36 Aligned_cols=243 Identities=10% Similarity=0.133 Sum_probs=111.8
Q ss_pred eEEEEECCCCc--EEeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcc-cccccCcceEE
Q 048017 110 HSVLYDIASNT--FRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKN-LWDRRWYASNQ 186 (566)
Q Consensus 110 ~~~~yDp~t~~--w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~-M~~~R~y~s~~ 186 (566)
.+.++|+++++ |+.-.. ... .+..++.+|+|++... ...+..||+.+. ...|+..... ....+...+.+
T Consensus 114 ~l~a~d~~tG~~~W~~~~~--~~~-~~~p~~~~~~v~v~~~----~g~l~~~d~~tG-~~~W~~~~~~~~~~~~~~~~~~ 185 (376)
T 3q7m_A 114 QVYALNTSDGTVAWQTKVA--GEA-LSRPVVSDGLVLIHTS----NGQLQALNEADG-AVKWTVNLDMPSLSLRGESAPT 185 (376)
T ss_dssp EEEEEETTTCCEEEEEECS--SCC-CSCCEEETTEEEEECT----TSEEEEEETTTC-CEEEEEECCC-----CCCCCCE
T ss_pred EEEEEECCCCCEEEEEeCC--Cce-EcCCEEECCEEEEEcC----CCeEEEEECCCC-cEEEEEeCCCCceeecCCCCcE
Confidence 36788988876 544221 111 1223445777776543 246889999732 3358753320 11112222333
Q ss_pred EecCCcEEEEcCccCCeEEEE-eCCCCCCCeeee-ccccccCCCC--CCCCccceEEEecCCcEEEEEc-CeeEEEeccC
Q 048017 187 ILPDNRIIVVGGRRVFTYEFY-PKIDSLSSSLYL-RFLIETRDPG--EENNLYPFLHLLPDGNLFIFAN-RRSILFDYIN 261 (566)
Q Consensus 187 ~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~-p~l~~~~d~~--~~~~~yp~~~~l~~G~Ifv~Gg-~~~e~yDp~t 261 (566)
+.+|.||+ |..+ ..+-.+ +.+. ...|... +......+.. ......| ++.+|.||+.+. ....++|+++
T Consensus 186 -~~~~~v~~-g~~~-g~l~~~d~~tG-~~~w~~~~~~~~~~~~~~~~~~~~~~p---~~~~~~v~~~~~~g~l~~~d~~t 258 (376)
T 3q7m_A 186 -TAFGAAVV-GGDN-GRVSAVLMEQG-QMIWQQRISQATGSTEIDRLSDVDTTP---VVVNGVVFALAYNGNLTALDLRS 258 (376)
T ss_dssp -EETTEEEE-CCTT-TEEEEEETTTC-CEEEEEECCC-----------CCCCCC---EEETTEEEEECTTSCEEEEETTT
T ss_pred -EECCEEEE-EcCC-CEEEEEECCCC-cEEEEEecccCCCCcccccccccCCCc---EEECCEEEEEecCcEEEEEECCC
Confidence 33777776 3322 233344 4432 1234321 1100000000 0000112 344788887663 3577899988
Q ss_pred CeEEEeecccCCCCCCccCCCCceeeecccccCCCCCCCCCCCCCCEEEEEcCCCCCccccccccccccccCCeeEEEEe
Q 048017 262 NKLVKEFPVIPGNDKRNYPSTGSSILLPVKLSAGSDGNGTAALPDAEVMVCGGAPAGAFIKSDKESVYVEASRTCGRLKV 341 (566)
Q Consensus 262 ~~W~~~~p~lp~~~~r~~~~~g~avllpl~~~~~~~~~~y~~~~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d~ 341 (566)
++.....+ .. .. ..... . +++||+.... ..+.++|+
T Consensus 259 G~~~w~~~---~~---~~----~~~~~-------------~---~~~l~~~~~~------------------g~l~~~d~ 294 (376)
T 3q7m_A 259 GQIMWKRE---LG---SV----NDFIV-------------D---GNRIYLVDQN------------------DRVMALTI 294 (376)
T ss_dssp CCEEEEEC---CC---CE----EEEEE-------------E---TTEEEEEETT------------------CCEEEEET
T ss_pred CcEEeecc---CC---CC----CCceE-------------E---CCEEEEEcCC------------------CeEEEEEC
Confidence 75321121 11 01 11111 0 6788886431 23456776
Q ss_pred eCCCCCeEEeccCCCcccceeEEccCCeEEEEcCCCCCCCCCccccCc-CC--cEEeccCCCCCCcceeEEEEcCCCcEE
Q 048017 342 TDKYPVWSMEFMPMPRVMSDMLLLPSGDVIIINGASNGTAGWEDAEEP-DR--RFVVLNPSKIPRMYHSSAVVLPDGRIL 418 (566)
Q Consensus 342 ~~~~~~W~~~~M~~~R~~~~~vvLpdG~V~vvGG~~~g~~~~~~~ydP-t~--~Wt~~~~~~~~R~yhs~a~LlpdG~V~ 418 (566)
......|+...+... ..... ++.+|+||+... + +...++|+ +. .|+.-.. ......+.++ .+|+||
T Consensus 295 ~tG~~~w~~~~~~~~-~~~~~-~~~~~~l~v~~~-~----g~l~~~d~~tG~~~~~~~~~--~~~~~~~~~~--~~~~l~ 363 (376)
T 3q7m_A 295 DGGVTLWTQSDLLHR-LLTSP-VLYNGNLVVGDS-E----GYLHWINVEDGRFVAQQKVD--SSGFQTEPVA--ADGKLL 363 (376)
T ss_dssp TTCCEEEEECTTTTS-CCCCC-EEETTEEEEECT-T----SEEEEEETTTCCEEEEEECC--TTCBCSCCEE--ETTEEE
T ss_pred CCCcEEEeecccCCC-cccCC-EEECCEEEEEeC-C----CeEEEEECCCCcEEEEEecC--CCcceeCCEE--ECCEEE
Confidence 554556876533332 22232 334888887542 1 23457888 33 4654221 1122222233 488988
Q ss_pred EecC
Q 048017 419 VGGS 422 (566)
Q Consensus 419 v~GG 422 (566)
+...
T Consensus 364 v~~~ 367 (376)
T 3q7m_A 364 IQAK 367 (376)
T ss_dssp EEBT
T ss_pred EEeC
Confidence 8654
No 71
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=95.73 E-value=1.4 Score=41.62 Aligned_cols=214 Identities=14% Similarity=0.073 Sum_probs=102.0
Q ss_pred eecCCCcEEE-EcCCCCCCCeEEEEcCCCCCCCcccccCc-ccccccCcceEEEecCCcEEEEcCccCCeEEEE-eCCCC
Q 048017 136 AVLSDGTLVQ-TGGYNVGDRVIRLFTPCNDEGCDWVELSK-NLWDRRWYASNQILPDNRIIVVGGRRVFTYEFY-PKIDS 212 (566)
Q Consensus 136 ~~l~dG~l~v-vGG~~~g~~~v~~ydP~~~~t~~W~~~~~-~M~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~ 212 (566)
++-.+|+||+ .... ...+.+||+. +........ .+..+ .+.+.-+||++|+... ...+.+| +...
T Consensus 30 ~~~~~g~l~v~~~~~---~~~i~~~~~~---~~~~~~~~~~~~~~p---~~i~~~~~g~l~v~~~--~~~i~~~d~~~~- 97 (270)
T 1rwi_B 30 AVDSAGNVYVTSEGM---YGRVVKLATG---STGTTVLPFNGLYQP---QGLAVDGAGTVYVTDF--NNRVVTLAAGSN- 97 (270)
T ss_dssp EECTTCCEEEEECSS---SCEEEEECC--------EECCCCSCCSC---CCEEECTTCCEEEEET--TTEEEEECTTCS-
T ss_pred EECCCCCEEEEccCC---CCcEEEecCC---CcccceEeeCCcCCc---ceeEECCCCCEEEEcC--CCEEEEEeCCCc-
Confidence 4446899998 5332 2578889987 444332211 01222 2355556899998876 3345555 4432
Q ss_pred CCCeeeeccccccCCCCCCCCccceEE-EecCCcEEEEEc--CeeEEEeccCCeEEEeecccCCCCCCccCCCCceeeec
Q 048017 213 LSSSLYLRFLIETRDPGEENNLYPFLH-LLPDGNLFIFAN--RRSILFDYINNKLVKEFPVIPGNDKRNYPSTGSSILLP 289 (566)
Q Consensus 213 ~~~w~~~p~l~~~~d~~~~~~~yp~~~-~l~~G~Ifv~Gg--~~~e~yDp~t~~W~~~~p~lp~~~~r~~~~~g~avllp 289 (566)
........ ....|... +.++|+||+... ....+||..+.... ... ... -..+. +.+ +-
T Consensus 98 --~~~~~~~~---------~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~-~~~--~~~--~~~p~-~i~-~~- 158 (270)
T 1rwi_B 98 --NQTVLPFD---------GLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQT-VLP--FTG--LNDPD-GVA-VD- 158 (270)
T ss_dssp --CCEECCCC---------SCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCE-ECC--CCS--CCSCC-CEE-EC-
T ss_pred --eEeeeecC---------CcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeE-eec--ccc--CCCce-eEE-Ee-
Confidence 11111110 01234433 346899998753 45677887665543 121 111 11221 222 21
Q ss_pred ccccCCCCCCCCCCCCCCEEEEEcCCCCCccccccccccccccCCeeEEEEeeCCCCCeEEe---ccCCCcccceeEEcc
Q 048017 290 VKLSAGSDGNGTAALPDAEVMVCGGAPAGAFIKSDKESVYVEASRTCGRLKVTDKYPVWSME---FMPMPRVMSDMLLLP 366 (566)
Q Consensus 290 l~~~~~~~~~~y~~~~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~---~M~~~R~~~~~vvLp 366 (566)
.+++||+..... ..+.++|+.. ..-... .+..+ .+.++-+
T Consensus 159 ---------------~~g~l~v~~~~~-----------------~~i~~~~~~~--~~~~~~~~~~~~~p---~~i~~d~ 201 (270)
T 1rwi_B 159 ---------------NSGNVYVTDTDN-----------------NRVVKLEAES--NNQVVLPFTDITAP---WGIAVDE 201 (270)
T ss_dssp ---------------TTCCEEEEEGGG-----------------TEEEEECTTT--CCEEECCCSSCCSE---EEEEECT
T ss_pred ---------------CCCCEEEEECCC-----------------CEEEEEecCC--CceEeecccCCCCc---eEEEECC
Confidence 157788864321 2355566432 111111 22222 2334557
Q ss_pred CCeEEEEcCCCCCCCCCccccCc-CCcEEeccCCCCCCcceeEEEEcCCCcEEEecCC
Q 048017 367 SGDVIIINGASNGTAGWEDAEEP-DRRFVVLNPSKIPRMYHSSAVVLPDGRILVGGSN 423 (566)
Q Consensus 367 dG~V~vvGG~~~g~~~~~~~ydP-t~~Wt~~~~~~~~R~yhs~a~LlpdG~V~v~GG~ 423 (566)
+|+||+...... ....||+ +..-........ .......+.+||++|++...
T Consensus 202 ~g~l~v~~~~~~----~v~~~~~~~~~~~~~~~~~~--~~p~~i~~~~~g~l~v~~~~ 253 (270)
T 1rwi_B 202 AGTVYVTEHNTN----QVVKLLAGSTTSTVLPFTGL--NTPLAVAVDSDRTVYVADRG 253 (270)
T ss_dssp TCCEEEEETTTS----CEEEECTTCSCCEECCCCSC--SCEEEEEECTTCCEEEEEGG
T ss_pred CCCEEEEECCCC----cEEEEcCCCCcceeeccCCC--CCceeEEECCCCCEEEEECC
Confidence 899999875331 1346788 332222211111 12223445689999998653
No 72
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=95.73 E-value=1.9 Score=43.32 Aligned_cols=147 Identities=10% Similarity=0.087 Sum_probs=73.0
Q ss_pred eEEEEECCCCcEE-eCcCC-CcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCccccc-ccCcceEE
Q 048017 110 HSVLYDIASNTFR-PLLLQ-TDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWD-RRWYASNQ 186 (566)
Q Consensus 110 ~~~~yDp~t~~w~-~l~~~-~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~-~R~y~s~~ 186 (566)
.+.+||..+++-. .+... +..........++|+++++|+.+ ..+++||.... ......... +.. ...-.+++
T Consensus 46 ~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g~v~vw~~~~~-~~~~~~~~~-~~~h~~~v~~~~ 120 (416)
T 2pm9_A 46 SLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDN---GSLELYSTNEA-NNAINSMAR-FSNHSSSVKTVK 120 (416)
T ss_dssp CCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESS---SCEEEECCSST-TSCCCEEEE-CCCSSSCCCEEE
T ss_pred eEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccC---CeEEEeecccc-cccccchhh-ccCCccceEEEE
Confidence 4788998876532 22111 12122233455789999998763 46889998720 011112111 221 12222344
Q ss_pred EecC-CcEEEEcCccCCeEEEE-eCCCCC--C--CeeeeccccccCCCCCCCCccceEEEecC-CcEEEEEcC--eeEEE
Q 048017 187 ILPD-NRIIVVGGRRVFTYEFY-PKIDSL--S--SSLYLRFLIETRDPGEENNLYPFLHLLPD-GNLFIFANR--RSILF 257 (566)
Q Consensus 187 ~L~d-G~VyvvGG~~~~s~E~y-P~~~~~--~--~w~~~p~l~~~~d~~~~~~~yp~~~~l~~-G~Ifv~Gg~--~~e~y 257 (566)
..++ +++++.|+.++ .+.+| ..+... . ............ ..--.+...++ +++++.|+. ...+|
T Consensus 121 ~~~~~~~~l~s~~~dg-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~------~~v~~~~~~~~~~~~l~~~~~dg~v~iw 193 (416)
T 2pm9_A 121 FNAKQDNVLASGGNNG-EIFIWDMNKCTESPSNYTPLTPGQSMSSV------DEVISLAWNQSLAHVFASAGSSNFASIW 193 (416)
T ss_dssp ECSSSTTBEEEECSSS-CEEBCBTTTTSSCTTTCCCBCCCCSCCSS------CCCCEEEECSSCTTEEEEESSSSCEEEE
T ss_pred EcCCCCCEEEEEcCCC-eEEEEECCCCccccccccccccccccCCC------CCeeEEEeCCCCCcEEEEEcCCCCEEEE
Confidence 4556 88888888664 34555 322100 0 000010000100 01112334566 788888875 46789
Q ss_pred eccCCeEEEee
Q 048017 258 DYINNKLVKEF 268 (566)
Q Consensus 258 Dp~t~~W~~~~ 268 (566)
|..+++....+
T Consensus 194 d~~~~~~~~~~ 204 (416)
T 2pm9_A 194 DLKAKKEVIHL 204 (416)
T ss_dssp ETTTTEEEEEE
T ss_pred ECCCCCcceEE
Confidence 99988765433
No 73
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=95.73 E-value=2.1 Score=45.43 Aligned_cols=240 Identities=13% Similarity=0.141 Sum_probs=114.7
Q ss_pred EEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEecC
Q 048017 111 SVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILPD 190 (566)
Q Consensus 111 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~d 190 (566)
+.+||......+.+.... ....+.++.+||+.+++|+.+ ..++++|.. ...-..... ....-.+++.-+|
T Consensus 286 i~~w~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~t~~~d---~~i~~w~~~---~~~~~~~~~---~~~~v~~~~~s~~ 355 (577)
T 2ymu_A 286 VKLWNRNGQLLQTLTGHS-SSVWGVAFSPDGQTIASASDD---KTVKLWNRN---GQHLQTLTG---HSSSVWGVAFSPD 355 (577)
T ss_dssp EEEEETTSCEEEEECCCS-SCEEEEEECTTSSEEEEEETT---SCEEEEETT---SCEEEEECC---CSSCEEEEEECTT
T ss_pred EEEEeCCCcEEEEEecCC-CCeEEEEECCCCCEEEEEeCC---CeEEEEeCC---CCeeEEEeC---CCCCEEEEEECCC
Confidence 567776554444433211 111223456789999988753 468888875 332221111 1111123455678
Q ss_pred CcEEEEcCccCCeEEEEeCCCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEcC--eeEEEeccCCeEEEee
Q 048017 191 NRIIVVGGRRVFTYEFYPKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANR--RSILFDYINNKLVKEF 268 (566)
Q Consensus 191 G~VyvvGG~~~~s~E~yP~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~--~~e~yDp~t~~W~~~~ 268 (566)
|+.++.|+.+ ..+.+|..+. .- ... +..... .--.+...+||+.++.|+. ...+||..... .+.+
T Consensus 356 g~~l~~~~~d-g~v~~~~~~~---~~-~~~-~~~~~~------~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~-~~~~ 422 (577)
T 2ymu_A 356 GQTIASASDD-KTVKLWNRNG---QL-LQT-LTGHSS------SVRGVAFSPDGQTIASASDDKTVKLWNRNGQL-LQTL 422 (577)
T ss_dssp SSEEEEEETT-SEEEEEETTC---CE-EEE-EECCSS------CEEEEEECTTSSCEEEEETTSEEEEECTTCCE-EEEE
T ss_pred CCEEEEEeCC-CEEEEEcCCC---CE-EEE-ecCCCC------CeEEEEECCCCCEEEEEeCCCEEEEEeCCCCE-EEEe
Confidence 9999888765 3455663321 11 111 111000 0012334579998888875 46678854332 2222
Q ss_pred cccCCCCCCccCCCCceeeecccccCCCCCCCCCCCCCCEEEEEcCCCCCccccccccccccccCCeeEEEEeeCCCCCe
Q 048017 269 PVIPGNDKRNYPSTGSSILLPVKLSAGSDGNGTAALPDAEVMVCGGAPAGAFIKSDKESVYVEASRTCGRLKVTDKYPVW 348 (566)
Q Consensus 269 p~lp~~~~r~~~~~g~avllpl~~~~~~~~~~y~~~~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W 348 (566)
... . +...-+...| +++.+++|+.+ ..+..+|... ..-
T Consensus 423 ---~~~--~-----~~v~~~~~s~-------------d~~~l~~~~~d-----------------~~v~~w~~~~--~~~ 460 (577)
T 2ymu_A 423 ---TGH--S-----SSVWGVAFSP-------------DDQTIASASDD-----------------KTVKLWNRNG--QLL 460 (577)
T ss_dssp ---ECC--S-----SCEEEEEECT-------------TSSEEEEEETT-----------------SEEEEEETTS--CEE
T ss_pred ---cCC--C-----CCeEEEEECC-------------CCCEEEEEcCC-----------------CEEEEEECCC--CEE
Confidence 221 0 1111111111 56677777654 2234444321 111
Q ss_pred EEeccCCCcccceeEEccCCeEEEEcCCCCCCCCCccccCc-CCcEEeccCCCCCCcceeEEEEcCCCcEEEecCC
Q 048017 349 SMEFMPMPRVMSDMLLLPSGDVIIINGASNGTAGWEDAEEP-DRRFVVLNPSKIPRMYHSSAVVLPDGRILVGGSN 423 (566)
Q Consensus 349 ~~~~M~~~R~~~~~vvLpdG~V~vvGG~~~g~~~~~~~ydP-t~~Wt~~~~~~~~R~yhs~a~LlpdG~V~v~GG~ 423 (566)
....-..... .+...-|||++++.++.+ + ....||. +..-..+... ..+ -......|||+.+++|+.
T Consensus 461 ~~~~~~~~~v-~~~~~spd~~~las~~~d-~---~i~iw~~~~~~~~~~~~h-~~~--v~~l~~s~dg~~l~s~~~ 528 (577)
T 2ymu_A 461 QTLTGHSSSV-RGVAFSPDGQTIASASDD-K---TVKLWNRNGQLLQTLTGH-SSS--VRGVAFSPDGQTIASASD 528 (577)
T ss_dssp EEEECCSSCE-EEEEECTTSCEEEEEETT-S---EEEEEETTSCEEEEEECC-SSC--EEEEEECTTSSCEEEEET
T ss_pred EEEcCCCCCE-EEEEEcCCCCEEEEEeCC-C---EEEEEcCCCCEEEEEeCC-CCC--EEEEEEcCCCCEEEEEEC
Confidence 1111112222 234456899999998765 2 1234555 2222222111 011 123345799999999885
No 74
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=95.68 E-value=2 Score=50.68 Aligned_cols=152 Identities=9% Similarity=0.092 Sum_probs=83.3
Q ss_pred EEEeeCCeEEEEeccCCCCCCCCCCCCccccCCCCCCCcccceEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEc
Q 048017 68 MQVLNNDKVIIFDRTDMGPSNLSLPIDKCRKEGDVGQLDCTAHSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTG 147 (566)
Q Consensus 68 ~~~l~~gkV~~~gg~~~~~s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvG 147 (566)
.+.-++|+.++.|+.+ | .+.+||..+++....-..+.....+.++.+||+.+++|
T Consensus 621 ~~~s~~~~~l~s~~~d----------~---------------~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 675 (1249)
T 3sfz_A 621 ACFSQDGQRIASCGAD----------K---------------TLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATC 675 (1249)
T ss_dssp EEECTTSSEEEEEETT----------S---------------CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred EEECCCCCEEEEEeCC----------C---------------eEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEE
Confidence 4444699988888753 1 37789998876533222222222234566799999998
Q ss_pred CCCCCCCeEEEEcCCCCCCCcccccCccccc-ccCcceEEEec--CCcEEEEcCccCCeEEEE-eCCCCCCCeeeecccc
Q 048017 148 GYNVGDRVIRLFTPCNDEGCDWVELSKNLWD-RRWYASNQILP--DNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLI 223 (566)
Q Consensus 148 G~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~-~R~y~s~~~L~--dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~ 223 (566)
+.+ ..+.+||.. +.+... . +.. ...-.++...+ ++.+++.|+.+ ..+.+| ..+. ... .. +.
T Consensus 676 ~~d---~~v~vwd~~---~~~~~~--~-~~~~~~~v~~~~~~~~~~~~~l~sg~~d-~~v~vwd~~~~---~~~-~~-~~ 740 (1249)
T 3sfz_A 676 SAD---KKVKIWDSA---TGKLVH--T-YDEHSEQVNCCHFTNKSNHLLLATGSND-FFLKLWDLNQK---ECR-NT-MF 740 (1249)
T ss_dssp ETT---SEEEEEETT---TCCEEE--E-EECCSSCEEEEEECSSSSCCEEEEEETT-SCEEEEETTSS---SEE-EE-EC
T ss_pred eCC---CeEEEEECC---CCceEE--E-EcCCCCcEEEEEEecCCCceEEEEEeCC-CeEEEEECCCc---chh-he-ec
Confidence 863 579999987 443221 1 221 12222233334 44566666654 345666 3321 111 11 11
Q ss_pred ccCCCCCCCCccceEEEecCCcEEEEEcC--eeEEEeccCCeEE
Q 048017 224 ETRDPGEENNLYPFLHLLPDGNLFIFANR--RSILFDYINNKLV 265 (566)
Q Consensus 224 ~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~--~~e~yDp~t~~W~ 265 (566)
...+ .--.+...++|++++.|+. ...+||..+++-.
T Consensus 741 ~h~~------~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~ 778 (1249)
T 3sfz_A 741 GHTN------SVNHCRFSPDDELLASCSADGTLRLWDVRSANER 778 (1249)
T ss_dssp CCSS------CEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEE
T ss_pred CCCC------CEEEEEEecCCCEEEEEECCCeEEEEeCCCCccc
Confidence 1100 1112344679998888875 4678998887654
No 75
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=95.67 E-value=0.74 Score=54.46 Aligned_cols=131 Identities=11% Similarity=0.043 Sum_probs=70.7
Q ss_pred EEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEecC
Q 048017 111 SVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILPD 190 (566)
Q Consensus 111 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~d 190 (566)
+.+||..+++.......+.....+.+..+||+.+++|+.+ ..+.+||.. +.+..... .....-.+.+..++
T Consensus 985 i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d---g~i~vwd~~---~~~~~~~~---~~~~~v~~~~~~~~ 1055 (1249)
T 3sfz_A 985 IKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSED---SVIQVWNWQ---TGDYVFLQ---AHQETVKDFRLLQD 1055 (1249)
T ss_dssp CEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSS---SBEEEEETT---TTEEECCB---CCSSCEEEEEECSS
T ss_pred EEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCC---CEEEEEECC---CCceEEEe---cCCCcEEEEEEcCC
Confidence 5688887776543322222223334566799999998864 578999987 55544322 12222334455556
Q ss_pred CcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEcCe--eEEEeccCCe
Q 048017 191 NRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANRR--SILFDYINNK 263 (566)
Q Consensus 191 G~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~~--~e~yDp~t~~ 263 (566)
+++ +.|+.+ ..+.+| ..+. ..-.... .... .--.+...++|+.++.|+.+ ..+||..+.+
T Consensus 1056 ~~l-~~~~~d-g~v~vwd~~~~--~~~~~~~---~~~~------~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~ 1118 (1249)
T 3sfz_A 1056 SRL-LSWSFD-GTVKVWNVITG--RIERDFT---CHQG------TVLSCAISSDATKFSSTSADKTAKIWSFDLLS 1118 (1249)
T ss_dssp SEE-EEEESS-SEEEEEETTTT--CCCEEEE---CCSS------CCCCEEECSSSSSCEEECCSSCCCEECSSSSS
T ss_pred CcE-EEEECC-CcEEEEECCCC--ceeEEEc---ccCC------cEEEEEECCCCCEEEEEcCCCcEEEEECCCcc
Confidence 665 445544 356666 3321 0111111 0000 01123456799988888753 5678877654
No 76
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=95.66 E-value=0.4 Score=54.08 Aligned_cols=90 Identities=11% Similarity=0.140 Sum_probs=53.6
Q ss_pred eEEEEECCCCcEEeCcCCC--cccccCCeecCC--CcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccc-cCcce
Q 048017 110 HSVLYDIASNTFRPLLLQT--DTWCSSGAVLSD--GTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDR-RWYAS 184 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~--~~~c~~~~~l~d--G~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~-R~y~s 184 (566)
.+.+||..++++..+.... .....+....++ |..+++|+.+ ..+.+||.. +.+|..... +... ..-.+
T Consensus 32 ~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~D---g~I~vwd~~---~~~~~~~~~-~~~h~~~V~~ 104 (753)
T 3jro_A 32 TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD---GKVLIWKEE---NGRWSQIAV-HAVHSASVNS 104 (753)
T ss_dssp EEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETT---SCEEEEEEE---TTEEEEEEE-ECCCSSCEEE
T ss_pred cEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCC---CeEEEEECC---CCccccccc-ccCCCCCeEE
Confidence 3678888877776654322 111122233355 8999999864 568899987 666655443 3322 22233
Q ss_pred EEEecC--CcEEEEcCccCCeEEEE
Q 048017 185 NQILPD--NRIIVVGGRRVFTYEFY 207 (566)
Q Consensus 185 ~~~L~d--G~VyvvGG~~~~s~E~y 207 (566)
++..++ |+.+++|+.++ .+.+|
T Consensus 105 v~~sp~~~~~~l~sgs~dg-~I~vw 128 (753)
T 3jro_A 105 VQWAPHEYGPLLLVASSDG-KVSVV 128 (753)
T ss_dssp EEECCGGGCSEEEEEETTS-EEEEE
T ss_pred EEECCCCCCCEEEEEeCCC-cEEEE
Confidence 444556 88999988764 45555
No 77
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=95.61 E-value=0.55 Score=46.05 Aligned_cols=137 Identities=15% Similarity=0.159 Sum_probs=70.1
Q ss_pred eEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCccccc-ccCcceEEEe
Q 048017 110 HSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWD-RRWYASNQIL 188 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~-~R~y~s~~~L 188 (566)
.+.+||..+++-...-..+.......++.++++++++|+.+ ..+++||.. + .+..... +.. ...-.+++.-
T Consensus 78 ~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D---~~v~lWd~~---~-~~~~~~~-~~~h~~~v~~v~~~ 149 (304)
T 2ynn_A 78 RIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDD---LTVKLWNWE---N-NWALEQT-FEGHEHFVMCVAFN 149 (304)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETT---SCEEEEEGG---G-TTEEEEE-ECCCCSCEEEEEEC
T ss_pred EEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCC---CeEEEEECC---C-Ccchhhh-hcccCCcEEEEEEC
Confidence 37789988876432211222222234456789999998864 578899976 2 2222111 221 1222233333
Q ss_pred c-CCcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceEEE--ecCCcEEEEEcC--eeEEEeccCC
Q 048017 189 P-DNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHL--LPDGNLFIFANR--RSILFDYINN 262 (566)
Q Consensus 189 ~-dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~--l~~G~Ifv~Gg~--~~e~yDp~t~ 262 (566)
+ |+++++.|+.++ ++.+| .... ..... ...... ..-..... .+++++++.|+. ...+||..+.
T Consensus 150 p~~~~~l~sgs~D~-~v~iwd~~~~-~~~~~-~~~~~~--------~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~ 218 (304)
T 2ynn_A 150 PKDPSTFASGCLDR-TVKVWSLGQS-TPNFT-LTTGQE--------RGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK 218 (304)
T ss_dssp TTCTTEEEEEETTS-EEEEEETTCS-SCSEE-EECCCT--------TCEEEEEECCSTTCCEEEEEETTSEEEEEETTTT
T ss_pred CCCCCEEEEEeCCC-eEEEEECCCC-Cccce-eccCCc--------CcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCC
Confidence 4 678888888764 55566 3221 00111 100000 00001111 247778888874 4678999887
Q ss_pred eEE
Q 048017 263 KLV 265 (566)
Q Consensus 263 ~W~ 265 (566)
+-.
T Consensus 219 ~~~ 221 (304)
T 2ynn_A 219 SCV 221 (304)
T ss_dssp EEE
T ss_pred ccc
Confidence 644
No 78
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=95.61 E-value=2 Score=42.66 Aligned_cols=28 Identities=25% Similarity=0.450 Sum_probs=18.9
Q ss_pred EEEecCCc-EEEEE--cCeeEEEeccCCeEE
Q 048017 238 LHLLPDGN-LFIFA--NRRSILFDYINNKLV 265 (566)
Q Consensus 238 ~~~l~~G~-Ifv~G--g~~~e~yDp~t~~W~ 265 (566)
+...+||+ ||+.. +....+||..++++.
T Consensus 216 ~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~ 246 (361)
T 3scy_A 216 LIFNSDGKFAYLINEIGGTVIAFRYADGMLD 246 (361)
T ss_dssp EEECTTSSEEEEEETTTCEEEEEEEETTEEE
T ss_pred EEEcCCCCEEEEEcCCCCeEEEEEecCCceE
Confidence 34467997 56655 245788998887664
No 79
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=95.59 E-value=1.3 Score=45.11 Aligned_cols=152 Identities=14% Similarity=0.137 Sum_probs=80.3
Q ss_pred EeeCCeEEEEeccCCCCCCCCCCCCccccCCCCCCCcccceEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCC
Q 048017 70 VLNNDKVIIFDRTDMGPSNLSLPIDKCRKEGDVGQLDCTAHSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGY 149 (566)
Q Consensus 70 ~l~~gkV~~~gg~~~~~s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~ 149 (566)
.-++|+.++.|+.+ ..+.+||..+.+....-..+..........++|+.+++|+.
T Consensus 131 ~s~dg~~l~s~~~d-------------------------~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~ 185 (393)
T 1erj_A 131 FSPDGKFLATGAED-------------------------RLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSG 185 (393)
T ss_dssp ECTTSSEEEEEETT-------------------------SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred ECCCCCEEEEEcCC-------------------------CeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecC
Confidence 33688888887753 13678999887654332222222223445678999998886
Q ss_pred CCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEec-CCcEEEEcCccCCeEEEE-eCCCCCCCee-eecccccc-
Q 048017 150 NVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILP-DNRIIVVGGRRVFTYEFY-PKIDSLSSSL-YLRFLIET- 225 (566)
Q Consensus 150 ~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~-dG~VyvvGG~~~~s~E~y-P~~~~~~~w~-~~p~l~~~- 225 (566)
+ ..+++||.. +.+... . +.....-.+++..+ ||+.++.|+.++ .+.+| ..+. ... ........
T Consensus 186 d---~~v~iwd~~---~~~~~~--~-~~~~~~v~~~~~~~~~~~~l~~~s~d~-~v~iwd~~~~---~~~~~~~~~~~~~ 252 (393)
T 1erj_A 186 D---RTVRIWDLR---TGQCSL--T-LSIEDGVTTVAVSPGDGKYIAAGSLDR-AVRVWDSETG---FLVERLDSENESG 252 (393)
T ss_dssp T---SEEEEEETT---TTEEEE--E-EECSSCEEEEEECSTTCCEEEEEETTS-CEEEEETTTC---CEEEEEC------
T ss_pred C---CcEEEEECC---CCeeEE--E-EEcCCCcEEEEEECCCCCEEEEEcCCC-cEEEEECCCC---cEEEeecccccCC
Confidence 4 679999987 443321 1 22222223344444 889999988764 45666 3321 111 11100000
Q ss_pred CCCCCCCCccceEEEecCCcEEEEEcC--eeEEEeccCC
Q 048017 226 RDPGEENNLYPFLHLLPDGNLFIFANR--RSILFDYINN 262 (566)
Q Consensus 226 ~d~~~~~~~yp~~~~l~~G~Ifv~Gg~--~~e~yDp~t~ 262 (566)
... .... -.+...++|+.++.|+. ...+||..+.
T Consensus 253 ~~h--~~~v-~~v~~~~~g~~l~s~s~d~~v~~wd~~~~ 288 (393)
T 1erj_A 253 TGH--KDSV-YSVVFTRDGQSVVSGSLDRSVKLWNLQNA 288 (393)
T ss_dssp CCC--SSCE-EEEEECTTSSEEEEEETTSEEEEEEC---
T ss_pred CCC--CCCE-EEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 000 0001 12233578998888874 4677887654
No 80
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=95.57 E-value=0.72 Score=45.67 Aligned_cols=110 Identities=16% Similarity=0.189 Sum_probs=62.4
Q ss_pred eecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccc-cCcceEEEecCCcEEEEcCccCCeEEEE-eCCCCC
Q 048017 136 AVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDR-RWYASNQILPDNRIIVVGGRRVFTYEFY-PKIDSL 213 (566)
Q Consensus 136 ~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~-R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~ 213 (566)
.+.+||+++++|+.+ ..+++||.. +.+|..... +... ..-.+.+..+||+.++.|+.++ .+.+| ..+.
T Consensus 15 ~~s~~~~~l~~~~~d---~~v~i~~~~---~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~~~~~dg-~i~vwd~~~~-- 84 (372)
T 1k8k_C 15 AWNKDRTQIAICPNN---HEVHIYEKS---GNKWVQVHE-LKEHNGQVTGVDWAPDSNRIVTCGTDR-NAYVWTLKGR-- 84 (372)
T ss_dssp EECTTSSEEEEECSS---SEEEEEEEE---TTEEEEEEE-EECCSSCEEEEEEETTTTEEEEEETTS-CEEEEEEETT--
T ss_pred EECCCCCEEEEEeCC---CEEEEEeCC---CCcEEeeee-ecCCCCcccEEEEeCCCCEEEEEcCCC-eEEEEECCCC--
Confidence 344689999998764 579999987 666655443 4322 2223445556899999988654 35555 3221
Q ss_pred CCee-eeccccccCCCCCCCCccceEEEecCCcEEEEEcC--eeEEEeccCCe
Q 048017 214 SSSL-YLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANR--RSILFDYINNK 263 (566)
Q Consensus 214 ~~w~-~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~--~~e~yDp~t~~ 263 (566)
.+. ...+. ... ..--.+...++|++++.|+. ...+||..+.+
T Consensus 85 -~~~~~~~~~-~~~------~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~ 129 (372)
T 1k8k_C 85 -TWKPTLVIL-RIN------RAARCVRWAPNEKKFAVGSGSRVISICYFEQEN 129 (372)
T ss_dssp -EEEEEEECC-CCS------SCEEEEEECTTSSEEEEEETTSSEEEEEEETTT
T ss_pred -eeeeeEEee-cCC------CceeEEEECCCCCEEEEEeCCCEEEEEEecCCC
Confidence 221 11111 100 00112234568988888874 35677776653
No 81
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=95.55 E-value=1.6 Score=44.18 Aligned_cols=233 Identities=12% Similarity=0.154 Sum_probs=110.8
Q ss_pred eecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccc-cccCcceEEEecCCcEEEEcCccCCeEEEE-eCCC--
Q 048017 136 AVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLW-DRRWYASNQILPDNRIIVVGGRRVFTYEFY-PKID-- 211 (566)
Q Consensus 136 ~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~-~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~-- 211 (566)
...++|+.++.|+.+ ..+++||.. +.+-.. . +. ...+-.+++.-+||+.++.||.+. .+.+| ....
T Consensus 73 ~~sp~~~~l~s~s~D---~~v~iWd~~---~~~~~~--~-~~~h~~~v~~~~~s~~g~~las~~~d~-~v~iw~~~~~~~ 142 (380)
T 3iz6_a 73 DWTPEKNWIVSASQD---GRLIVWNAL---TSQKTH--A-IKLHCPWVMECAFAPNGQSVACGGLDS-ACSIFNLSSQAD 142 (380)
T ss_dssp EECTTSSCEEEEETT---SEEEEEETT---TTEEEE--E-EECCCTTCCCCEECTTSSEEEECCSSS-CCEEEECCCCSS
T ss_pred EEcCCCCEEEEEeCC---CeEEEEECC---CCccce--E-EecCCCCEEEEEECCCCCEEEEeeCCC-cEEEEECCCCcc
Confidence 445789999999864 579999987 433221 1 11 223334556667999999999764 34455 2111
Q ss_pred CCCCeeeeccccccCCCCCCCCccceEEEec-CCcEEEEEcC--eeEEEeccCCeEEEeec-ccCCCCCCccCCCCceee
Q 048017 212 SLSSSLYLRFLIETRDPGEENNLYPFLHLLP-DGNLFIFANR--RSILFDYINNKLVKEFP-VIPGNDKRNYPSTGSSIL 287 (566)
Q Consensus 212 ~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~-~G~Ifv~Gg~--~~e~yDp~t~~W~~~~p-~lp~~~~r~~~~~g~avl 287 (566)
..........+....+ ... .+...+ ++..++.|+. ...+||..+++-...+. ..+.+ . .....-
T Consensus 143 ~~~~~~~~~~~~gh~~-----~v~-~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~----h--~~~v~~ 210 (380)
T 3iz6_a 143 RDGNMPVSRVLTGHKG-----YAS-SCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSG----H--TADVLS 210 (380)
T ss_dssp CCCSSTTCCBCCCCSS-----CCC-CCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSS----C--CSCEEE
T ss_pred ccCCccceeeccCCCc-----ceE-EEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCC----C--ccCeEE
Confidence 0000000011111100 000 011123 2445556653 46789999887553221 11111 0 111111
Q ss_pred ecccccCCCCCCCCCCCCCCEEEEEcCCCCCccccccccccccccCCeeEEEEeeCCCCCeEEeccCCCcccceeEEccC
Q 048017 288 LPVKLSAGSDGNGTAALPDAEVMVCGGAPAGAFIKSDKESVYVEASRTCGRLKVTDKYPVWSMEFMPMPRVMSDMLLLPS 367 (566)
Q Consensus 288 lpl~~~~~~~~~~y~~~~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~~M~~~R~~~~~vvLpd 367 (566)
+... .. ++.+++.|+.+ .++..+|+......-....-...... +....||
T Consensus 211 ~~~~--------~~----~~~~l~sgs~D-----------------~~v~~wd~~~~~~~~~~~~~h~~~v~-~v~~~p~ 260 (380)
T 3iz6_a 211 LSIN--------SL----NANMFISGSCD-----------------TTVRLWDLRITSRAVRTYHGHEGDIN-SVKFFPD 260 (380)
T ss_dssp EEEC--------SS----SCCEEEEEETT-----------------SCEEEEETTTTCCCCEEECCCSSCCC-EEEECTT
T ss_pred EEee--------cC----CCCEEEEEECC-----------------CeEEEEECCCCCcceEEECCcCCCeE-EEEEecC
Confidence 1111 11 56788888865 23445665421111111111122222 3345689
Q ss_pred CeEEEEcCCCCCCCCCccccCc-CCc-EEeccCCCC----CCcceeEEEEcCCCcEEEecCCC
Q 048017 368 GDVIIINGASNGTAGWEDAEEP-DRR-FVVLNPSKI----PRMYHSSAVVLPDGRILVGGSNP 424 (566)
Q Consensus 368 G~V~vvGG~~~g~~~~~~~ydP-t~~-Wt~~~~~~~----~R~yhs~a~LlpdG~V~v~GG~~ 424 (566)
|+.++.|+.+ +. ...||. +.+ -........ ....-.....-|||+.+++|+..
T Consensus 261 ~~~l~s~s~D-~~---i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d 319 (380)
T 3iz6_a 261 GQRFGTGSDD-GT---CRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN 319 (380)
T ss_dssp SSEEEEECSS-SC---EEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT
T ss_pred CCeEEEEcCC-Ce---EEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECC
Confidence 9999999876 32 345665 222 111111100 00112245567999999998863
No 82
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=95.54 E-value=0.92 Score=46.61 Aligned_cols=133 Identities=14% Similarity=0.117 Sum_probs=71.6
Q ss_pred eEEEEECCCCcEEeCcCCC--cccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEE
Q 048017 110 HSVLYDIASNTFRPLLLQT--DTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQI 187 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~--~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~ 187 (566)
.+.+||..+++...+-... ...-.+.+..+||+.+++|+.+ ..+++||.. +.+- +.. +........+..
T Consensus 126 tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~D---g~v~iWd~~---~~~~--~~~-~~~h~~~v~~~s 196 (420)
T 4gga_A 126 SVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS---AEVQLWDVQ---QQKR--LRN-MTSHSARVGSLS 196 (420)
T ss_dssp EEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT---SCEEEEETT---TTEE--EEE-ECCCSSCEEEEE
T ss_pred EEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECC---CeEEEEEcC---CCcE--EEE-EeCCCCceEEEe
Confidence 4788999998876543322 2122234556799999999864 578999987 4432 222 222222222333
Q ss_pred ecCCcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEcC--eeEEEeccCCe
Q 048017 188 LPDNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANR--RSILFDYINNK 263 (566)
Q Consensus 188 L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~--~~e~yDp~t~~ 263 (566)
.|+++++.|+.+. .+.++ .... ...... +..... .--.....++|+.++.++. ...+||..+++
T Consensus 197 -~~~~~l~sgs~d~-~i~~~d~~~~---~~~~~~-~~~h~~------~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~ 263 (420)
T 4gga_A 197 -WNSYILSSGSRSG-HIHHHDVRVA---EHHVAT-LSGHSQ------EVCGLRWAPDGRHLASGGNDNLVNVWPSAPGE 263 (420)
T ss_dssp -EETTEEEEEETTS-EEEEEETTSS---SCEEEE-EECCSS------CEEEEEECTTSSEEEEEETTSCEEEEESSCCS
T ss_pred -eCCCEEEEEeCCC-ceeEeeeccc---ceeeEE-eccccc------ceeeeeecCCCCeeeeeeccccceEEeecccc
Confidence 3789988888654 33344 2211 111111 111100 1112334568888888875 35677776653
No 83
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=95.53 E-value=2.7 Score=46.41 Aligned_cols=87 Identities=20% Similarity=0.286 Sum_probs=48.7
Q ss_pred eEEEEECCCCcE------EeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccc-cccCc
Q 048017 110 HSVLYDIASNTF------RPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLW-DRRWY 182 (566)
Q Consensus 110 ~~~~yDp~t~~w------~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~-~~R~y 182 (566)
.+.+||..++.- +.+ ..+.......++.+||+++++|+.+ ..+++||.. +.+-.. . +. +...-
T Consensus 406 ~i~~W~~~~~~~~~~~~~~~~-~~h~~~v~~v~~s~~g~~l~sgs~D---g~v~vwd~~---~~~~~~--~-~~~h~~~v 475 (694)
T 3dm0_A 406 SIILWKLTKDDKAYGVAQRRL-TGHSHFVEDVVLSSDGQFALSGSWD---GELRLWDLA---AGVSTR--R-FVGHTKDV 475 (694)
T ss_dssp EEEEEECCCSTTCSCEEEEEE-ECCSSCEEEEEECTTSSEEEEEETT---SEEEEEETT---TTEEEE--E-EECCSSCE
T ss_pred cEEEEEccCCCccccccccee-cCCCCcEEEEEECCCCCEEEEEeCC---CcEEEEECC---CCccee--E-EeCCCCCE
Confidence 367888765421 111 1122222334556799999999864 679999987 433211 1 21 11222
Q ss_pred ceEEEecCCcEEEEcCccCCeEEEE
Q 048017 183 ASNQILPDNRIIVVGGRRVFTYEFY 207 (566)
Q Consensus 183 ~s~~~L~dG~VyvvGG~~~~s~E~y 207 (566)
.+++.-+||+.++.|+.+. ++.+|
T Consensus 476 ~~~~~s~~~~~l~s~s~D~-~i~iw 499 (694)
T 3dm0_A 476 LSVAFSLDNRQIVSASRDR-TIKLW 499 (694)
T ss_dssp EEEEECTTSSCEEEEETTS-CEEEE
T ss_pred EEEEEeCCCCEEEEEeCCC-EEEEE
Confidence 3344556899888888764 45555
No 84
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=95.48 E-value=0.94 Score=45.49 Aligned_cols=63 Identities=22% Similarity=0.113 Sum_probs=36.6
Q ss_pred CeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEecCCcEEEEcCccCCeEEEE
Q 048017 135 GAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILPDNRIIVVGGRRVFTYEFY 207 (566)
Q Consensus 135 ~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y 207 (566)
....+||+++++|+.+ ..+.+||.. ...-..+.. ....-.+.+..++|+.+++|+.++ .+.+|
T Consensus 114 ~~~s~~~~~l~~~~~d---g~i~i~~~~---~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~-~i~iw 176 (425)
T 1r5m_A 114 LAWSHDGNSIVTGVEN---GELRLWNKT---GALLNVLNF---HRAPIVSVKWNKDGTHIISMDVEN-VTILW 176 (425)
T ss_dssp EEECTTSSEEEEEETT---SCEEEEETT---SCEEEEECC---CCSCEEEEEECTTSSEEEEEETTC-CEEEE
T ss_pred EEEcCCCCEEEEEeCC---CeEEEEeCC---CCeeeeccC---CCccEEEEEECCCCCEEEEEecCC-eEEEE
Confidence 4456789999998864 468889843 222221111 122223445556898888887654 34445
No 85
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=95.48 E-value=1.3 Score=43.27 Aligned_cols=142 Identities=13% Similarity=0.132 Sum_probs=69.3
Q ss_pred eEEEEECCCCcEEeCcCC-CcccccCCeecCC---CcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcc-e
Q 048017 110 HSVLYDIASNTFRPLLLQ-TDTWCSSGAVLSD---GTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYA-S 184 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~-~~~~c~~~~~l~d---G~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~-s 184 (566)
.+.+||..+++....... +.....+....++ |.++++|+.+ ..+.+||.. +.+- .... +......- +
T Consensus 45 ~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d---g~i~iwd~~---~~~~-~~~~-~~~~~~~v~~ 116 (357)
T 3i2n_A 45 VIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFG---GNLHIWNLE---APEM-PVYS-VKGHKEIINA 116 (357)
T ss_dssp EEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETT---SCEEEECTT---SCSS-CSEE-ECCCSSCEEE
T ss_pred EEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCC---CeEEEEeCC---CCCc-cEEE-EEecccceEE
Confidence 478899988877554321 1111222334445 6888888764 568899987 3320 1111 11111111 1
Q ss_pred E------EEecCCcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceEE---EecCCcEEEEEcC--
Q 048017 185 N------QILPDNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFLH---LLPDGNLFIFANR-- 252 (566)
Q Consensus 185 ~------~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~---~l~~G~Ifv~Gg~-- 252 (566)
. +.-+|++.++.|+.++ .+.+| ..... .............. ...+...+ ..+++++++.|+.
T Consensus 117 ~~~~~~~~~s~~~~~l~~~~~d~-~i~vwd~~~~~-~~~~~~~~~~~~~~----~~v~~~~~~~~~~~~~~~l~~~~~d~ 190 (357)
T 3i2n_A 117 IDGIGGLGIGEGAPEIVTGSRDG-TVKVWDPRQKD-DPVANMEPVQGENK----RDCWTVAFGNAYNQEERVVCAGYDNG 190 (357)
T ss_dssp EEEESGGGCC-CCCEEEEEETTS-CEEEECTTSCS-SCSEEECCCTTSCC----CCEEEEEEECCCC-CCCEEEEEETTS
T ss_pred EeeccccccCCCccEEEEEeCCC-eEEEEeCCCCC-CcceeccccCCCCC----CceEEEEEEeccCCCCCEEEEEccCC
Confidence 1 1125788888888654 45566 33210 01111111100000 00111111 1268999988875
Q ss_pred eeEEEeccCCeEE
Q 048017 253 RSILFDYINNKLV 265 (566)
Q Consensus 253 ~~e~yDp~t~~W~ 265 (566)
...+||.++.+-.
T Consensus 191 ~i~i~d~~~~~~~ 203 (357)
T 3i2n_A 191 DIKLFDLRNMALR 203 (357)
T ss_dssp EEEEEETTTTEEE
T ss_pred eEEEEECccCcee
Confidence 5778999887754
No 86
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=95.38 E-value=2.2 Score=41.44 Aligned_cols=137 Identities=14% Similarity=0.099 Sum_probs=62.8
Q ss_pred EEEEECC--CCcEEeCcCCC-cccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEE
Q 048017 111 SVLYDIA--SNTFRPLLLQT-DTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQI 187 (566)
Q Consensus 111 ~~~yDp~--t~~w~~l~~~~-~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~ 187 (566)
+.+||.. +++++.+.... .......++.+||+.+++++.. ...+.+||..+ ......... ......-...+.
T Consensus 62 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~--~~~i~~~d~~~--~~~~~~~~~-~~~~~~~~~~~~ 136 (343)
T 1ri6_A 62 VLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYN--AGNVSVTRLED--GLPVGVVDV-VEGLDGCHSANI 136 (343)
T ss_dssp EEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETT--TTEEEEEEEET--TEEEEEEEE-ECCCTTBCCCEE
T ss_pred EEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecC--CCeEEEEECCC--Ccccccccc-ccCCCCceEEEE
Confidence 5666665 77776554221 1122233455788865555432 25688888731 112222211 222222233455
Q ss_pred ecCCcEEEEcCccCCeEEEE-eCCCCCCCeeeec--cccccCCCCCCCCccce-EEEecCCc-EEEEEc--CeeEEEecc
Q 048017 188 LPDNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLR--FLIETRDPGEENNLYPF-LHLLPDGN-LFIFAN--RRSILFDYI 260 (566)
Q Consensus 188 L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p--~l~~~~d~~~~~~~yp~-~~~l~~G~-Ifv~Gg--~~~e~yDp~ 260 (566)
-+||+.+++++.....+.+| ..++ ....... ..... ....|. +...++|+ ||+.+. ....+||..
T Consensus 137 s~dg~~l~~~~~~~~~v~~~d~~~~--~~~~~~~~~~~~~~------~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~ 208 (343)
T 1ri6_A 137 SPDNRTLWVPALKQDRICLFTVSDD--GHLVAQDPAEVTTV------EGAGPRHMVFHPNEQYAYCVNELNSSVDVWELK 208 (343)
T ss_dssp CTTSSEEEEEEGGGTEEEEEEECTT--SCEEEEEEEEEECS------TTCCEEEEEECTTSSEEEEEETTTTEEEEEESS
T ss_pred CCCCCEEEEecCCCCEEEEEEecCC--CceeeecccccccC------CCCCcceEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 56886444444233455666 3331 1221110 01000 011233 34457888 666653 356788874
No 87
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=95.36 E-value=2.7 Score=42.43 Aligned_cols=233 Identities=10% Similarity=0.121 Sum_probs=108.0
Q ss_pred ecCCCcEEEEcCCCC--------CCCeEEEEcCCCCCCCcccccCc-c---cccccCcce-EEEecCCcEEEEc-CccCC
Q 048017 137 VLSDGTLVQTGGYNV--------GDRVIRLFTPCNDEGCDWVELSK-N---LWDRRWYAS-NQILPDNRIIVVG-GRRVF 202 (566)
Q Consensus 137 ~l~dG~l~vvGG~~~--------g~~~v~~ydP~~~~t~~W~~~~~-~---M~~~R~y~s-~~~L~dG~VyvvG-G~~~~ 202 (566)
+-.++.++++|.... ....+++|+.... ......... . ......|.- ++.=+||+.++++ |....
T Consensus 79 ~~~~~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~ 157 (365)
T 4h5i_A 79 IDASKGIILVGCNENSTKITQGKGNKHLRKFKYDKV-NDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPA 157 (365)
T ss_dssp EEEETTEEEEECCCCHHHHHHTSCCCCEEEEEEETT-TTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSC
T ss_pred EEeCCCEEEEEECCCccEEEEecCCCcEEEEEecCC-CceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCC
Confidence 345788888886532 1356777764311 111111110 0 111122332 3334699987764 44445
Q ss_pred eEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEcC-eeEEEeccCCeEEEeecccCCCCCCccC
Q 048017 203 TYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANR-RSILFDYINNKLVKEFPVIPGNDKRNYP 280 (566)
Q Consensus 203 s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~-~~e~yDp~t~~W~~~~p~lp~~~~r~~~ 280 (566)
++.+| +.+. ... .. +..... -+ .+...+||++++.+.. ...+++..+++..... .... ....
T Consensus 158 ~i~iwd~~~~---~~~-~~-~~~~~~------V~-~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~-~~~~---~~~~ 221 (365)
T 4h5i_A 158 IMRIIDPSDL---TEK-FE-IETRGE------VK-DLHFSTDGKVVAYITGSSLEVISTVTGSCIARK-TDFD---KNWS 221 (365)
T ss_dssp EEEEEETTTT---EEE-EE-EECSSC------CC-EEEECTTSSEEEEECSSCEEEEETTTCCEEEEE-CCCC---TTEE
T ss_pred EEEEeECCCC---cEE-EE-eCCCCc------eE-EEEEccCCceEEeccceeEEEEEeccCcceeee-ecCC---CCCC
Confidence 67777 4432 111 11 111100 11 2334689999988764 4677888777654211 1111 1110
Q ss_pred CCCceeeecccccCCCCCCCCCCCCCCEEEEEcCCCCCccccccccccccccCCeeEEEEeeCCCCCeEE--e-ccCC-C
Q 048017 281 STGSSILLPVKLSAGSDGNGTAALPDAEVMVCGGAPAGAFIKSDKESVYVEASRTCGRLKVTDKYPVWSM--E-FMPM-P 356 (566)
Q Consensus 281 ~~g~avllpl~~~~~~~~~~y~~~~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~--~-~M~~-~ 356 (566)
- ......| +++.++.++.+.+. ...+..+|+.. ..+.. . .+.. .
T Consensus 222 v-~~v~fsp----------------dg~~l~~~s~d~~~-------------~~~i~~~~~~~--~~~~~~~~~~~~~~~ 269 (365)
T 4h5i_A 222 L-SKINFIA----------------DDTVLIAASLKKGK-------------GIVLTKISIKS--GNTSVLRSKQVTNRF 269 (365)
T ss_dssp E-EEEEEEE----------------TTEEEEEEEESSSC-------------CEEEEEEEEET--TEEEEEEEEEEESSC
T ss_pred E-EEEEEcC----------------CCCEEEEEecCCcc-------------eeEEeeccccc--ceecceeeeeecCCC
Confidence 0 1112222 67888877654211 01233344432 22221 1 1111 1
Q ss_pred cccceeEEccCCeEEEEcCCCCCCCCCccccCc-CCcE-EeccCCCCCCcceeEEEEcCCCcEEEecCCC
Q 048017 357 RVMSDMLLLPSGDVIIINGASNGTAGWEDAEEP-DRRF-VVLNPSKIPRMYHSSAVVLPDGRILVGGSNP 424 (566)
Q Consensus 357 R~~~~~vvLpdG~V~vvGG~~~g~~~~~~~ydP-t~~W-t~~~~~~~~R~yhs~a~LlpdG~V~v~GG~~ 424 (566)
..--+...-|||+++++|+.+ + ....||- +.+- ..+-...... -.....-|||+.++.|+.+
T Consensus 270 ~~V~~~~~Spdg~~lasgs~D-~---~V~iwd~~~~~~~~~~~~gH~~~--V~~v~fSpdg~~laS~S~D 333 (365)
T 4h5i_A 270 KGITSMDVDMKGELAVLASND-N---SIALVKLKDLSMSKIFKQAHSFA--ITEVTISPDSTYVASVSAA 333 (365)
T ss_dssp SCEEEEEECTTSCEEEEEETT-S---CEEEEETTTTEEEEEETTSSSSC--EEEEEECTTSCEEEEEETT
T ss_pred CCeEeEEECCCCCceEEEcCC-C---EEEEEECCCCcEEEEecCcccCC--EEEEEECCCCCEEEEEeCC
Confidence 111123356999999999876 3 1345665 3221 1111111111 1234457999999999864
No 88
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=95.36 E-value=2.2 Score=41.49 Aligned_cols=141 Identities=11% Similarity=0.042 Sum_probs=72.9
Q ss_pred eEEEEECCCCcE-EeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEe
Q 048017 110 HSVLYDIASNTF-RPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQIL 188 (566)
Q Consensus 110 ~~~~yDp~t~~w-~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L 188 (566)
.+.+||+.+++. .........-+.+.++.+||+.++++....+...+.+||.. +.+.... +.........+.-
T Consensus 63 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~---~~~~~~~---~~~~~~~~~~~~s 136 (331)
T 3u4y_A 63 TLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFL---KNKFIST---IPIPYDAVGIAIS 136 (331)
T ss_dssp EEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETT---TTEEEEE---EECCTTEEEEEEC
T ss_pred eEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECC---CCCeEEE---EECCCCccceEEC
Confidence 477899998875 22211122223334566788866655432223389999987 5544322 2233223456666
Q ss_pred cCCc-EEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccce-EEEecCCc-EEEEEc--CeeEEEeccCC
Q 048017 189 PDNR-IIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPF-LHLLPDGN-LFIFAN--RRSILFDYINN 262 (566)
Q Consensus 189 ~dG~-VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~-~~~l~~G~-Ifv~Gg--~~~e~yDp~t~ 262 (566)
+||+ +|+.+......+.+| -..+ ....... .... . ....|. +...+||+ +|+.+. ....+||.+++
T Consensus 137 pdg~~l~~~~~~~~~~i~~~~~~~~--g~~~~~~-~~~~-~----~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~ 208 (331)
T 3u4y_A 137 PNGNGLILIDRSSANTVRRFKIDAD--GVLFDTG-QEFI-S----GGTRPFNITFTPDGNFAFVANLIGNSIGILETQNP 208 (331)
T ss_dssp TTSSCEEEEEETTTTEEEEEEECTT--CCEEEEE-EEEE-C----SSSSEEEEEECTTSSEEEEEETTTTEEEEEECSST
T ss_pred CCCCEEEEEecCCCceEEEEEECCC--CcEeecC-Cccc-c----CCCCccceEECCCCCEEEEEeCCCCeEEEEECCCC
Confidence 7886 666654433325666 2211 1111110 0000 0 011233 33457898 676653 45788999887
Q ss_pred eE
Q 048017 263 KL 264 (566)
Q Consensus 263 ~W 264 (566)
+.
T Consensus 209 ~~ 210 (331)
T 3u4y_A 209 EN 210 (331)
T ss_dssp TS
T ss_pred cc
Confidence 75
No 89
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=95.32 E-value=2.3 Score=41.31 Aligned_cols=141 Identities=11% Similarity=0.005 Sum_probs=67.4
Q ss_pred EEEEECC-CCcEEeCcCC-CcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEe
Q 048017 111 SVLYDIA-SNTFRPLLLQ-TDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQIL 188 (566)
Q Consensus 111 ~~~yDp~-t~~w~~l~~~-~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L 188 (566)
+.+||.. +++.+.+... ......+.++.+||+.+++++..+ ..+.+|+...+ +.++..+.. +.....-...+.-
T Consensus 17 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~--~~v~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~s 92 (343)
T 1ri6_A 17 IHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPE--FRVLAYRIAPD-DGALTFAAE-SALPGSLTHISTD 92 (343)
T ss_dssp EEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTT--TEEEEEEECTT-TCCEEEEEE-EECSSCCSEEEEC
T ss_pred EEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCC--CeEEEEEecCC-CCceeeccc-cccCCCCcEEEEc
Confidence 5566653 3444433221 111222345567898666665432 56777665311 445655443 3322222334555
Q ss_pred cCCcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccce-EEEecCCc-EEEEE--cCeeEEEeccC-C
Q 048017 189 PDNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPF-LHLLPDGN-LFIFA--NRRSILFDYIN-N 262 (566)
Q Consensus 189 ~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~-~~~l~~G~-Ifv~G--g~~~e~yDp~t-~ 262 (566)
+||+.+++++.....+.+| .... ............ ..+. +...++|+ ||+.+ +....+||..+ +
T Consensus 93 ~dg~~l~~~~~~~~~i~~~d~~~~--~~~~~~~~~~~~--------~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~ 162 (343)
T 1ri6_A 93 HQGQFVFVGSYNAGNVSVTRLEDG--LPVGVVDVVEGL--------DGCHSANISPDNRTLWVPALKQDRICLFTVSDDG 162 (343)
T ss_dssp TTSSEEEEEETTTTEEEEEEEETT--EEEEEEEEECCC--------TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTS
T ss_pred CCCCEEEEEecCCCeEEEEECCCC--ccccccccccCC--------CCceEEEECCCCCEEEEecCCCCEEEEEEecCCC
Confidence 6888555555444456666 3211 011111111100 0122 23467886 55554 24578899887 6
Q ss_pred eEE
Q 048017 263 KLV 265 (566)
Q Consensus 263 ~W~ 265 (566)
+..
T Consensus 163 ~~~ 165 (343)
T 1ri6_A 163 HLV 165 (343)
T ss_dssp CEE
T ss_pred cee
Confidence 554
No 90
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=95.28 E-value=0.94 Score=44.66 Aligned_cols=103 Identities=11% Similarity=0.083 Sum_probs=58.3
Q ss_pred eCCeEEEEeccCCCCCCCCCCCCccccCCCCCCCcccceEEEEECCCCcEEeCcCC--CcccccCCeecC--CCcEEEEc
Q 048017 72 NNDKVIIFDRTDMGPSNLSLPIDKCRKEGDVGQLDCTAHSVLYDIASNTFRPLLLQ--TDTWCSSGAVLS--DGTLVQTG 147 (566)
Q Consensus 72 ~~gkV~~~gg~~~~~s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~--~~~~c~~~~~l~--dG~l~vvG 147 (566)
++|+.++.|+.+ ..+.+||..+++...+... +...-...+..+ +|++++.|
T Consensus 23 ~~g~~lasgs~D-------------------------~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~ 77 (316)
T 3bg1_A 23 YYGTRLATCSSD-------------------------RSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASC 77 (316)
T ss_dssp GGGCEEEEEETT-------------------------TEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEE
T ss_pred CCCCEEEEEeCC-------------------------CeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEE
Confidence 688888888754 1367888877654333221 111101112222 48888888
Q ss_pred CCCCCCCeEEEEcCCCCCCCcccccCccccc-ccCcceEEEecC--CcEEEEcCccCCeEEEE
Q 048017 148 GYNVGDRVIRLFTPCNDEGCDWVELSKNLWD-RRWYASNQILPD--NRIIVVGGRRVFTYEFY 207 (566)
Q Consensus 148 G~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~-~R~y~s~~~L~d--G~VyvvGG~~~~s~E~y 207 (566)
+.+ ..+++||.. +.+|..... +.. ...-.+++.-++ |++++.|+.++ .+.+|
T Consensus 78 s~D---~~v~iWd~~---~~~~~~~~~-~~~h~~~V~~v~~~p~~~g~~lasgs~D~-~i~lw 132 (316)
T 3bg1_A 78 SYD---RKVIIWREE---NGTWEKSHE-HAGHDSSVNSVCWAPHDYGLILACGSSDG-AISLL 132 (316)
T ss_dssp ETT---SCEEEECCS---SSCCCEEEE-ECCCSSCCCEEEECCTTTCSCEEEECSSS-CEEEE
T ss_pred ECC---CEEEEEECC---CCcceEEEE-ccCCCCceEEEEECCCCCCcEEEEEcCCC-CEEEE
Confidence 864 579999998 666654432 321 122223444445 78888888764 34455
No 91
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=95.27 E-value=2.7 Score=41.97 Aligned_cols=133 Identities=14% Similarity=0.157 Sum_probs=70.9
Q ss_pred eEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEec
Q 048017 110 HSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILP 189 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~ 189 (566)
.+.+||..+++....-.... ...+.+..+||+.++++|.. ...+.+||.. +++.... +.....-.+.+.-+
T Consensus 55 ~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~--~~~v~v~d~~---~~~~~~~---~~~~~~~~~~~~s~ 125 (391)
T 1l0q_A 55 DVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMA--SSTLSVIDTT---SNTVAGT---VKTGKSPLGLALSP 125 (391)
T ss_dssp EEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETT--TTEEEEEETT---TTEEEEE---EECSSSEEEEEECT
T ss_pred eEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECC--CCEEEEEECC---CCeEEEE---EeCCCCcceEEECC
Confidence 37789998887654322222 22234456788855554432 2579999998 5543221 22233333455556
Q ss_pred CCc-EEEEcCccCCeEEEE-eCCCCCCCee-eeccccccCCCCCCCCccce-EEEecCCc-EEEEEcC--eeEEEeccCC
Q 048017 190 DNR-IIVVGGRRVFTYEFY-PKIDSLSSSL-YLRFLIETRDPGEENNLYPF-LHLLPDGN-LFIFANR--RSILFDYINN 262 (566)
Q Consensus 190 dG~-VyvvGG~~~~s~E~y-P~~~~~~~w~-~~p~l~~~~d~~~~~~~yp~-~~~l~~G~-Ifv~Gg~--~~e~yDp~t~ 262 (566)
||+ +|+.++.+ ..+.+| ..+. ... ..+. . ..+. +...++|+ ||+.+.. ...+||..++
T Consensus 126 dg~~l~~~~~~~-~~v~~~d~~~~---~~~~~~~~---~--------~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~ 190 (391)
T 1l0q_A 126 DGKKLYVTNNGD-KTVSVINTVTK---AVINTVSV---G--------RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN 190 (391)
T ss_dssp TSSEEEEEETTT-TEEEEEETTTT---EEEEEEEC---C--------SSEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred CCCEEEEEeCCC-CEEEEEECCCC---cEEEEEec---C--------CCcceEEECCCCCEEEEEeCCCCEEEEEECCCC
Confidence 887 44565433 456666 3331 111 1111 0 1122 23456776 5555543 5788999998
Q ss_pred eEEE
Q 048017 263 KLVK 266 (566)
Q Consensus 263 ~W~~ 266 (566)
+...
T Consensus 191 ~~~~ 194 (391)
T 1l0q_A 191 SVID 194 (391)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 7654
No 92
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=95.11 E-value=4.7 Score=43.78 Aligned_cols=138 Identities=14% Similarity=0.109 Sum_probs=68.4
Q ss_pred eEEEEECCCCcEEeCcC--CCcccccCCeecCCCcEEEEcCCCC-CCCeEEEEcCCCCCCCcccccCcccc-cccCcceE
Q 048017 110 HSVLYDIASNTFRPLLL--QTDTWCSSGAVLSDGTLVQTGGYNV-GDRVIRLFTPCNDEGCDWVELSKNLW-DRRWYASN 185 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~--~~~~~c~~~~~l~dG~l~vvGG~~~-g~~~v~~ydP~~~~t~~W~~~~~~M~-~~R~y~s~ 185 (566)
.+.+||..+.+...... .+.......++-+||+.++++|... ....++++|.. ... .. +. ..+.-.++
T Consensus 82 ~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~---~~~----~~-l~gh~~~v~~v 153 (611)
T 1nr0_A 82 NVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTG---TSN----GN-LTGQARAMNSV 153 (611)
T ss_dssp EEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTC---CBC----BC-CCCCSSCEEEE
T ss_pred CEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCC---CCc----ce-ecCCCCCceEE
Confidence 37789886544221111 1111122345567899888877542 22467777743 211 11 22 12222344
Q ss_pred EEecCCc-EEEEcCccCCeEEEEeCCCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEcC--eeEEEeccCC
Q 048017 186 QILPDNR-IIVVGGRRVFTYEFYPKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANR--RSILFDYINN 262 (566)
Q Consensus 186 ~~L~dG~-VyvvGG~~~~s~E~yP~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~--~~e~yDp~t~ 262 (566)
+.-+++. .++.|+.+ .++.+|-.. .......+....+ .--.+...+||++++.|+. ...+||..++
T Consensus 154 ~f~p~~~~~l~s~s~D-~~v~lwd~~----~~~~~~~l~~H~~------~V~~v~fspdg~~las~s~D~~i~lwd~~~g 222 (611)
T 1nr0_A 154 DFKPSRPFRIISGSDD-NTVAIFEGP----PFKFKSTFGEHTK------FVHSVRYNPDGSLFASTGGDGTIVLYNGVDG 222 (611)
T ss_dssp EECSSSSCEEEEEETT-SCEEEEETT----TBEEEEEECCCSS------CEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred EECCCCCeEEEEEeCC-CeEEEEECC----CCeEeeeeccccC------ceEEEEECCCCCEEEEEECCCcEEEEECCCC
Confidence 4456776 46666655 445566211 1111111111111 0112234579999998875 4678998887
Q ss_pred eEEE
Q 048017 263 KLVK 266 (566)
Q Consensus 263 ~W~~ 266 (566)
+...
T Consensus 223 ~~~~ 226 (611)
T 1nr0_A 223 TKTG 226 (611)
T ss_dssp CEEE
T ss_pred cEee
Confidence 6553
No 93
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=94.99 E-value=3.1 Score=41.02 Aligned_cols=142 Identities=16% Similarity=0.121 Sum_probs=69.4
Q ss_pred eEEEEECCCCcEEeCcCC--CcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCccccc------c--
Q 048017 110 HSVLYDIASNTFRPLLLQ--TDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWD------R-- 179 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~--~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~------~-- 179 (566)
.+.+||..+++++.+... ........++.+||+.+++.+.. ...+.+||... ..+...+.. +.. .
T Consensus 64 ~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~--~~~v~v~~~~~--~g~~~~~~~-~~~~~~~p~~~~ 138 (347)
T 3hfq_A 64 GIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYH--KGTAEVMKIAA--DGALTLTDT-VQHSGHGPRPEQ 138 (347)
T ss_dssp EEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETT--TTEEEEEEECT--TSCEEEEEE-EECCCCCSSTTC
T ss_pred eEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCC--CCEEEEEEeCC--CCCeeecce-eecCCCCCCccc
Confidence 477899888887766532 11122234556789855555432 25678888642 223322221 111 1
Q ss_pred --cCcceEEEecCCcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccce-EEEecCCc-EEEEEc--C
Q 048017 180 --RWYASNQILPDNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPF-LHLLPDGN-LFIFAN--R 252 (566)
Q Consensus 180 --R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~-~~~l~~G~-Ifv~Gg--~ 252 (566)
..-+.++.-+||++|+.+.. ...+.+| ...+ ............ ....|. +...+||+ ||+.+. .
T Consensus 139 ~~~~~~~~~~spdg~l~v~~~~-~~~v~~~~~~~~--g~~~~~~~~~~~------~g~~p~~~~~spdg~~l~v~~~~~~ 209 (347)
T 3hfq_A 139 DGSHIHYTDLTPDNRLAVIDLG-SDKVYVYNVSDA--GQLSEQSVLTME------AGFGPRHLVFSPDGQYAFLAGELSS 209 (347)
T ss_dssp SSCCEEEEEECTTSCEEEEETT-TTEEEEEEECTT--SCEEEEEEEECC------TTCCEEEEEECTTSSEEEEEETTTT
T ss_pred cCCCceEEEECCCCcEEEEeCC-CCEEEEEEECCC--CcEEEeeeEEcC------CCCCCceEEECCCCCEEEEEeCCCC
Confidence 11234556679997765543 3456667 3311 122211100000 011232 34567998 666543 3
Q ss_pred eeEEEecc--CCeEE
Q 048017 253 RSILFDYI--NNKLV 265 (566)
Q Consensus 253 ~~e~yDp~--t~~W~ 265 (566)
...+||.. ++++.
T Consensus 210 ~v~v~~~~~~~g~~~ 224 (347)
T 3hfq_A 210 QIASLKYDTQTGAFT 224 (347)
T ss_dssp EEEEEEEETTTTEEE
T ss_pred EEEEEEecCCCCceE
Confidence 45566654 46654
No 94
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=94.99 E-value=2.6 Score=42.85 Aligned_cols=136 Identities=9% Similarity=0.006 Sum_probs=70.3
Q ss_pred eEEEEECCCCcEEeCcCCCcccccCCeecCCCcEE-EEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEe
Q 048017 110 HSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLV-QTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQIL 188 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~-vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L 188 (566)
.+.+||..+.+....-..+.....+.++.++|+.+ +.++. ...+.+||+. +.+.... +.....-.+++.-
T Consensus 192 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~i~~~d~~---~~~~~~~---~~~~~~~~~~~~~ 262 (433)
T 3bws_A 192 AVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWI---SEDISVIDRK---TKLEIRK---TDKIGLPRGLLLS 262 (433)
T ss_dssp EEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETT---TTEEEEEETT---TTEEEEE---CCCCSEEEEEEEC
T ss_pred EEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecC---CCcEEEEECC---CCcEEEE---ecCCCCceEEEEc
Confidence 47889998876543222222222234455677755 45433 2579999987 5443321 2222222334445
Q ss_pred cCCcEEEEcCccC-------CeEEEE-eCCCCCCCee-eeccccccCCCCCCCCccc-eEEEecCCc-EEEEEc--CeeE
Q 048017 189 PDNRIIVVGGRRV-------FTYEFY-PKIDSLSSSL-YLRFLIETRDPGEENNLYP-FLHLLPDGN-LFIFAN--RRSI 255 (566)
Q Consensus 189 ~dG~VyvvGG~~~-------~s~E~y-P~~~~~~~w~-~~p~l~~~~d~~~~~~~yp-~~~~l~~G~-Ifv~Gg--~~~e 255 (566)
+||+.+++++... ..+.+| +.+. ... ..... ..+ .+...++|+ +|+.+. ....
T Consensus 263 ~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~---~~~~~~~~~-----------~~~~~~~~~~~g~~l~~~~~~~~~v~ 328 (433)
T 3bws_A 263 KDGKELYIAQFSASNQESGGGRLGIYSMDKE---KLIDTIGPP-----------GNKRHIVSGNTENKIYVSDMCCSKIE 328 (433)
T ss_dssp TTSSEEEEEEEESCTTCSCCEEEEEEETTTT---EEEEEEEEE-----------ECEEEEEECSSTTEEEEEETTTTEEE
T ss_pred CCCCEEEEEECCCCccccCCCeEEEEECCCC---cEEeeccCC-----------CCcceEEECCCCCEEEEEecCCCEEE
Confidence 6887777776532 234456 3331 111 11100 011 223456785 777655 3578
Q ss_pred EEeccCCeEEEee
Q 048017 256 LFDYINNKLVKEF 268 (566)
Q Consensus 256 ~yDp~t~~W~~~~ 268 (566)
+||..+++..+.+
T Consensus 329 v~d~~~~~~~~~~ 341 (433)
T 3bws_A 329 VYDLKEKKVQKSI 341 (433)
T ss_dssp EEETTTTEEEEEE
T ss_pred EEECCCCcEEEEe
Confidence 8999988765444
No 95
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=94.97 E-value=0.54 Score=52.97 Aligned_cols=238 Identities=13% Similarity=0.059 Sum_probs=113.2
Q ss_pred cCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEE-ecC--CcEEEEcCccCCeEEEE-eCCCCC
Q 048017 138 LSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQI-LPD--NRIIVVGGRRVFTYEFY-PKIDSL 213 (566)
Q Consensus 138 l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~-L~d--G~VyvvGG~~~~s~E~y-P~~~~~ 213 (566)
-++|+.+++||.+ ..+.+||.. ..++..... +...+..-..+. .++ |+.++.|+.++ .+.+| ..+.
T Consensus 18 s~dg~~latg~~d---g~I~vwd~~---~~~~~~~~~-l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg-~I~vwd~~~~-- 87 (753)
T 3jro_A 18 DYYGKRLATCSSD---KTIKIFEVE---GETHKLIDT-LTGHEGPVWRVDWAHPKFGTILASCSYDG-KVLIWKEENG-- 87 (753)
T ss_dssp CSSSCCEEEEETT---TEEEEEEEE---TTEEEEEEE-ECCCSSCEEEEEECCTTSCSEEEEEETTS-CEEEEEEETT--
T ss_pred CCCCCeEEEEECC---CcEEEEecC---CCCCcccee-ccCCcCceEEEEecCCCCCCEEEEEeCCC-eEEEEECCCC--
Confidence 3578888888764 578899876 556655433 332222222333 345 88999888764 35555 3321
Q ss_pred CCeeeeccccccCCCCCCCCccceEEEecC--CcEEEEEcC--eeEEEeccCCeEEEeecccCCCCCCccCCCCceeeec
Q 048017 214 SSSLYLRFLIETRDPGEENNLYPFLHLLPD--GNLFIFANR--RSILFDYINNKLVKEFPVIPGNDKRNYPSTGSSILLP 289 (566)
Q Consensus 214 ~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~--G~Ifv~Gg~--~~e~yDp~t~~W~~~~p~lp~~~~r~~~~~g~avllp 289 (566)
.+.....+....+ .. -.+...++ |++++.|+. .+.+||..++.-.... .+... . +....+.
T Consensus 88 -~~~~~~~~~~h~~-----~V-~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~-~~~~~--~-----~~v~~l~ 152 (753)
T 3jro_A 88 -RWSQIAVHAVHSA-----SV-NSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPI-IIDAH--A-----IGVNSAS 152 (753)
T ss_dssp -EEEEEEEECCCSS-----CE-EEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCE-EEECC--S-----SCEEEEE
T ss_pred -cccccccccCCCC-----Ce-EEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCccee-EeecC--C-----CceEEEE
Confidence 2221111111100 00 12233466 889988875 4677888765211000 01110 0 0011111
Q ss_pred ccccCC-CCC--CCCCCCCCCEEEEEcCCCCCccccccccccccccCCeeEEEEeeCCCCCeEEe-ccCC-CcccceeEE
Q 048017 290 VKLSAG-SDG--NGTAALPDAEVMVCGGAPAGAFIKSDKESVYVEASRTCGRLKVTDKYPVWSME-FMPM-PRVMSDMLL 364 (566)
Q Consensus 290 l~~~~~-~~~--~~y~~~~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~-~M~~-~R~~~~~vv 364 (566)
..|... .++ .... +++.+++|+.+ ..+..+|+......+... .+.. ...-.+...
T Consensus 153 ~~p~~~~~~~~~~~~~---d~~~l~sgs~d-----------------g~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~ 212 (753)
T 3jro_A 153 WAPATIEEDGEHNGTK---ESRKFVTGGAD-----------------NLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAW 212 (753)
T ss_dssp ECCCC---------CG---GGCCEEEEETT-----------------SCEEEEEEETTTTEEEEEEEECCCSSCEEEEEE
T ss_pred ecCcccccccccccCC---CCCEEEEEECC-----------------CeEEEEeccCCcccceeeeeecCCCCcEEEEEe
Confidence 111000 000 0000 35677777654 235667776544455543 3322 222223345
Q ss_pred ccC---CeEEEEcCCCCCCCCCccccCc-C--CcEEe-ccCCCCCCcceeEEEEcCCCcEEEecCCC
Q 048017 365 LPS---GDVIIINGASNGTAGWEDAEEP-D--RRFVV-LNPSKIPRMYHSSAVVLPDGRILVGGSNP 424 (566)
Q Consensus 365 Lpd---G~V~vvGG~~~g~~~~~~~ydP-t--~~Wt~-~~~~~~~R~yhs~a~LlpdG~V~v~GG~~ 424 (566)
-|+ |++++.||.+ | ....||. + ..+.. +................|||+.+++||..
T Consensus 213 sp~~~~~~~l~s~s~D-g---~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~D 275 (753)
T 3jro_A 213 SPTVLLRSYLASVSQD-R---TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGD 275 (753)
T ss_dssp CCCCSSSEEEEEEESS-S---CEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSS
T ss_pred ccCCCCCCEEEEEecC-C---EEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCC
Confidence 678 8999999876 3 2345665 2 12211 11111111111234557999999988864
No 96
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=94.91 E-value=2.7 Score=43.13 Aligned_cols=87 Identities=15% Similarity=0.208 Sum_probs=49.7
Q ss_pred EEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccc-cccCcceEEEec
Q 048017 111 SVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLW-DRRWYASNQILP 189 (566)
Q Consensus 111 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~-~~R~y~s~~~L~ 189 (566)
+.+||..+.+....-..+.....+..+.++|..+++|+.+ ..+.+||.. +..-.. . +. ...+-.....-+
T Consensus 174 i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D---~~i~~wd~~---~~~~~~--~-~~~h~~~v~~~~~~~ 244 (410)
T 1vyh_C 174 IKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRD---KTIKMWEVQ---TGYCVK--T-FTGHREWVRMVRPNQ 244 (410)
T ss_dssp CCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETT---SEEEEEETT---TCCEEE--E-EECCSSCEEEEEECT
T ss_pred EEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCC---CeEEEEECC---CCcEEE--E-EeCCCccEEEEEECC
Confidence 5577776654432222222222234556789999998864 679999987 443221 1 21 223333444556
Q ss_pred CCcEEEEcCccCCeEEEE
Q 048017 190 DNRIIVVGGRRVFTYEFY 207 (566)
Q Consensus 190 dG~VyvvGG~~~~s~E~y 207 (566)
||++++.|+.++ ++.+|
T Consensus 245 ~g~~l~s~s~D~-~v~vw 261 (410)
T 1vyh_C 245 DGTLIASCSNDQ-TVRVW 261 (410)
T ss_dssp TSSEEEEEETTS-CEEEE
T ss_pred CCCEEEEEcCCC-eEEEE
Confidence 899999988764 34455
No 97
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=94.89 E-value=3.5 Score=41.16 Aligned_cols=218 Identities=12% Similarity=0.089 Sum_probs=104.4
Q ss_pred CCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEecCCcEEEEcCccCCeEEEEeCCCCCCCeeee
Q 048017 140 DGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILPDNRIIVVGGRRVFTYEFYPKIDSLSSSLYL 219 (566)
Q Consensus 140 dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~yP~~~~~~~w~~~ 219 (566)
+++++++|-. ..+ |--. |...+|+++......+-.....+...++++|++|... .+|-..+...+|...
T Consensus 89 ~~~~~~~g~~----g~i--~~S~-DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g----~v~~S~DgG~tW~~~ 157 (327)
T 2xbg_A 89 GNEGWIVGEP----PIM--LHTT-DGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNVG----AIYRTKDSGKNWQAL 157 (327)
T ss_dssp TTEEEEEEET----TEE--EEES-STTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETTC----CEEEESSTTSSEEEE
T ss_pred CCeEEEEECC----CeE--EEEC-CCCCCceECccccCCCCCeEEEEEECCCCEEEEeCCc----cEEEEcCCCCCCEEe
Confidence 5778887532 123 2211 1256899875311111112234555688999887532 244222223468654
Q ss_pred ccccccCCCCCCCCccceEEEecCCcEEEEEcCeeEEE--eccCCeEEEeecccCCCCCCccCCCCceeeecccccCCCC
Q 048017 220 RFLIETRDPGEENNLYPFLHLLPDGNLFIFANRRSILF--DYINNKLVKEFPVIPGNDKRNYPSTGSSILLPVKLSAGSD 297 (566)
Q Consensus 220 p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~~~e~y--Dp~t~~W~~~~p~lp~~~~r~~~~~g~avllpl~~~~~~~ 297 (566)
..... .....+...++|+++++|....... |....+|. .+.. +. .... .. .+..+
T Consensus 158 ~~~~~--------~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~-~~~~-~~--~~~~--~~-~~~~~-------- 214 (327)
T 2xbg_A 158 VQEAI--------GVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWE-PHNR-TT--SRRL--HN-MGFTP-------- 214 (327)
T ss_dssp ECSCC--------CCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCE-EEEC-CS--SSCE--EE-EEECT--------
T ss_pred ecCCC--------cceEEEEEcCCCcEEEEECCCcEEEEeCCCCCcee-ECCC-CC--CCcc--ce-eEECC--------
Confidence 32111 0112334456888887774432211 33256787 3431 21 1221 01 11111
Q ss_pred CCCCCCCCCCEEEEEcCCCCCccccccccccccccCCeeEEEEeeCCCCCeEEec---cCCCcccceeEEccCCeEEEEc
Q 048017 298 GNGTAALPDAEVMVCGGAPAGAFIKSDKESVYVEASRTCGRLKVTDKYPVWSMEF---MPMPRVMSDMLLLPSGDVIIIN 374 (566)
Q Consensus 298 ~~~y~~~~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~~---M~~~R~~~~~vvLpdG~V~vvG 374 (566)
++++|+++.. +. +.+.+ .+....|+... ++........+..+++++|++|
T Consensus 215 --------~g~~~~~~~~--G~----------------~~~s~-~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g 267 (327)
T 2xbg_A 215 --------DGRLWMIVNG--GK----------------IAFSD-PDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAG 267 (327)
T ss_dssp --------TSCEEEEETT--TE----------------EEEEE-TTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEE
T ss_pred --------CCCEEEEeCC--ce----------------EEEec-CCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEe
Confidence 5778877642 11 11110 01135687653 3333333343445688999987
Q ss_pred CCCCCCCCCccccCcCCcEEeccC-CCCCCcceeEEEEcCCCcEEEecCC
Q 048017 375 GASNGTAGWEDAEEPDRRFVVLNP-SKIPRMYHSSAVVLPDGRILVGGSN 423 (566)
Q Consensus 375 G~~~g~~~~~~~ydPt~~Wt~~~~-~~~~R~yhs~a~LlpdG~V~v~GG~ 423 (566)
+.. . .....|-+.+|+.+.. ...+..+++++.. .+++++++|.+
T Consensus 268 ~~g--~--i~~S~DgG~tW~~~~~~~~~~~~~~~v~~~-~~~~~~~~G~~ 312 (327)
T 2xbg_A 268 GAG--A--LLCSQDGGQTWQQDVDVKKVPSNFYKILFF-SPDQGFILGQK 312 (327)
T ss_dssp STT--C--EEEESSTTSSCEECGGGTTSSSCCCEEEEE-ETTEEEEECST
T ss_pred CCC--e--EEEeCCCCcccEEcCccCCCCCCeEEEEEE-CCCceEEEcCC
Confidence 632 1 1111233789998763 3344455655544 67887777653
No 98
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=94.71 E-value=6.7 Score=43.54 Aligned_cols=138 Identities=15% Similarity=0.171 Sum_probs=73.1
Q ss_pred eEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcc-eEEEe
Q 048017 110 HSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYA-SNQIL 188 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~-s~~~L 188 (566)
.+.+||..+++....-..+..........++|+.+++|+.+ ..+.+||.. ++ |..... +....... +++.-
T Consensus 78 ~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g~i~vw~~~---~~-~~~~~~-~~~~~~~v~~~~~~ 149 (814)
T 3mkq_A 78 RIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDD---LTVKLWNWE---NN-WALEQT-FEGHEHFVMCVAFN 149 (814)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETT---SEEEEEEGG---GT-SEEEEE-EECCSSCEEEEEEE
T ss_pred eEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCC---CEEEEEECC---CC-ceEEEE-EcCCCCcEEEEEEE
Confidence 37789988887643322222222234456789888888753 578899976 32 322222 22222222 33334
Q ss_pred c-CCcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceEEEec--CCcEEEEEcC--eeEEEeccCC
Q 048017 189 P-DNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLP--DGNLFIFANR--RSILFDYINN 262 (566)
Q Consensus 189 ~-dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~--~G~Ifv~Gg~--~~e~yDp~t~ 262 (566)
+ ||+.+++|+.++ .+.+| .... ........... . .-..+...+ +|++++.|+. ...+||..++
T Consensus 150 p~~~~~l~~~~~dg-~v~vwd~~~~--~~~~~~~~~~~-~-------~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~ 218 (814)
T 3mkq_A 150 PKDPSTFASGCLDR-TVKVWSLGQS--TPNFTLTTGQE-R-------GVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK 218 (814)
T ss_dssp TTEEEEEEEEETTS-EEEEEETTCS--SCSEEEECCCT-T-------CCCEEEECCSTTCCEEEEECTTSEEEEEETTTT
T ss_pred cCCCCEEEEEeCCC-eEEEEECCCC--cceeEEecCCC-C-------CEEEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 4 678888887653 45566 3221 01111111000 0 011223344 8888888875 4678999887
Q ss_pred eEEE
Q 048017 263 KLVK 266 (566)
Q Consensus 263 ~W~~ 266 (566)
+-..
T Consensus 219 ~~~~ 222 (814)
T 3mkq_A 219 SCVA 222 (814)
T ss_dssp EEEE
T ss_pred cEEE
Confidence 6543
No 99
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=94.71 E-value=3.5 Score=40.79 Aligned_cols=110 Identities=7% Similarity=0.012 Sum_probs=61.1
Q ss_pred eecC--CCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEecCCcEEEEcCccCCeEEEE-eCCCC
Q 048017 136 AVLS--DGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILPDNRIIVVGGRRVFTYEFY-PKIDS 212 (566)
Q Consensus 136 ~~l~--dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~ 212 (566)
...+ +|+++++|+.+ ..+++||.. +.+-..... ........+++.-+||++++.|+.++ .+.+| ..+.
T Consensus 132 ~~~~~~~~~~l~s~s~d---g~i~~wd~~---~~~~~~~~~-~~~~~~i~~~~~~pdg~~lasg~~dg-~i~iwd~~~~- 202 (343)
T 3lrv_A 132 YGHNEVNTEYFIWADNR---GTIGFQSYE---DDSQYIVHS-AKSDVEYSSGVLHKDSLLLALYSPDG-ILDVYNLSSP- 202 (343)
T ss_dssp ECCC---CCEEEEEETT---CCEEEEESS---SSCEEEEEC-CCSSCCCCEEEECTTSCEEEEECTTS-CEEEEESSCT-
T ss_pred EcCCCCCCCEEEEEeCC---CcEEEEECC---CCcEEEEEe-cCCCCceEEEEECCCCCEEEEEcCCC-EEEEEECCCC-
Confidence 3445 88999998864 578999987 444322111 12222244566667999999998764 46677 3332
Q ss_pred CCCe-eeeccccccCCCCCCCCccceEEEecCCcEEEEEcC-eeEEEeccCCe
Q 048017 213 LSSS-LYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANR-RSILFDYINNK 263 (566)
Q Consensus 213 ~~~w-~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~-~~e~yDp~t~~ 263 (566)
... ..+.. .... .--.+...++|+.++.|+. ...+||.++.+
T Consensus 203 -~~~~~~~~~--~h~~------~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~ 246 (343)
T 3lrv_A 203 -DQASSRFPV--DEEA------KIKEVKFADNGYWMVVECDQTVVCFDLRKDV 246 (343)
T ss_dssp -TSCCEECCC--CTTS------CEEEEEECTTSSEEEEEESSBEEEEETTSST
T ss_pred -CCCccEEec--cCCC------CEEEEEEeCCCCEEEEEeCCeEEEEEcCCCC
Confidence 111 11111 0000 0012233578988887764 56789988764
No 100
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=94.66 E-value=4 Score=40.73 Aligned_cols=238 Identities=12% Similarity=0.059 Sum_probs=113.6
Q ss_pred CcEEeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCccccccc-CcceEEEecCCcEEEEc
Q 048017 119 NTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRR-WYASNQILPDNRIIVVG 197 (566)
Q Consensus 119 ~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R-~y~s~~~L~dG~VyvvG 197 (566)
.+|+.+.........+.....++.++++|-. ..+..-+-. ..+|+.+......+. ...++.. .++++|++|
T Consensus 25 ~~W~~~~~~~~~~~~~v~~~~~~~~~~~G~~----g~i~~s~Dg---G~tW~~~~~~~~~~~~~~~~i~~-~~~~~~~~g 96 (327)
T 2xbg_A 25 NPWEAIQLPTTATILDMSFIDRHHGWLVGVN----ATLMETRDG---GQTWEPRTLVLDHSDYRFNSVSF-QGNEGWIVG 96 (327)
T ss_dssp CCEEEEECSCSSCEEEEEESSSSCEEEEETT----TEEEEESST---TSSCEECCCCCSCCCCEEEEEEE-ETTEEEEEE
T ss_pred CCceEeecCCCCcEEEEEECCCCcEEEEcCC----CeEEEeCCC---CCCCeECCCCCCCCCccEEEEEe-cCCeEEEEE
Confidence 4677665332222222233346778887642 123222211 468998753122222 2233333 467888875
Q ss_pred CccCCeEEEEeCCCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEcCee-EEEeccCCeEEEeecccCCCCC
Q 048017 198 GRRVFTYEFYPKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANRRS-ILFDYINNKLVKEFPVIPGNDK 276 (566)
Q Consensus 198 G~~~~s~E~yP~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~~~-e~yDp~t~~W~~~~p~lp~~~~ 276 (566)
- .+ .+|-.++...+|......... +...+ ......++++|+.+.... .+-+-...+|.+ ... +..
T Consensus 97 ~-~g---~i~~S~DgG~tW~~~~~~~~~-----~~~~~-~i~~~~~~~~~~~~~~g~v~~S~DgG~tW~~-~~~-~~~-- 162 (327)
T 2xbg_A 97 E-PP---IMLHTTDGGQSWSQIPLDPKL-----PGSPR-LIKALGNGSAEMITNVGAIYRTKDSGKNWQA-LVQ-EAI-- 162 (327)
T ss_dssp E-TT---EEEEESSTTSSCEECCCCTTC-----SSCEE-EEEEEETTEEEEEETTCCEEEESSTTSSEEE-EEC-SCC--
T ss_pred C-CC---eEEEECCCCCCceECccccCC-----CCCeE-EEEEECCCCEEEEeCCccEEEEcCCCCCCEE-eec-CCC--
Confidence 2 22 244222224567654321110 01112 223346788998876432 222223467984 431 211
Q ss_pred CccCCCCceeeecccccCCCCCCCCCCCCCCEEEEEcCCCCCccccccccccccccCCeeEEEEeeCC-CCCeEEeccCC
Q 048017 277 RNYPSTGSSILLPVKLSAGSDGNGTAALPDAEVMVCGGAPAGAFIKSDKESVYVEASRTCGRLKVTDK-YPVWSMEFMPM 355 (566)
Q Consensus 277 r~~~~~g~avllpl~~~~~~~~~~y~~~~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d~~~~-~~~W~~~~M~~ 355 (566)
... .+ .+..+ +++++++|-.. .- .+ ..+. ...|+....+.
T Consensus 163 ~~~--~~-~~~~~----------------~~~~~~~g~~G-~~-----------------~~--S~d~gG~tW~~~~~~~ 203 (327)
T 2xbg_A 163 GVM--RN-LNRSP----------------SGEYVAVSSRG-SF-----------------YS--TWEPGQTAWEPHNRTT 203 (327)
T ss_dssp CCE--EE-EEECT----------------TSCEEEEETTS-SE-----------------EE--EECTTCSSCEEEECCS
T ss_pred cce--EE-EEEcC----------------CCcEEEEECCC-cE-----------------EE--EeCCCCCceeECCCCC
Confidence 111 01 11111 56777766321 11 11 1122 46898874445
Q ss_pred CcccceeEEccCCeEEEEcCCCCCCCCCcccc-Cc-CCcEEeccC--CCCCCcceeEEEEcCCCcEEEecCC
Q 048017 356 PRVMSDMLLLPSGDVIIINGASNGTAGWEDAE-EP-DRRFVVLNP--SKIPRMYHSSAVVLPDGRILVGGSN 423 (566)
Q Consensus 356 ~R~~~~~vvLpdG~V~vvGG~~~g~~~~~~~y-dP-t~~Wt~~~~--~~~~R~yhs~a~LlpdG~V~v~GG~ 423 (566)
.+....++..++|++|+++.. |. .... +- +.+|+.+.. ++.....++.+ ..+++++|++|++
T Consensus 204 ~~~~~~~~~~~~g~~~~~~~~--G~---~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~-~~~~~~~~~~g~~ 269 (327)
T 2xbg_A 204 SRRLHNMGFTPDGRLWMIVNG--GK---IAFSDPDNSENWGELLSPLRRNSVGFLDLA-YRTPNEVWLAGGA 269 (327)
T ss_dssp SSCEEEEEECTTSCEEEEETT--TE---EEEEETTEEEEECCCBCTTSSCCSCEEEEE-ESSSSCEEEEEST
T ss_pred CCccceeEECCCCCEEEEeCC--ce---EEEecCCCCCeeEeccCCcccCCcceEEEE-ecCCCEEEEEeCC
Confidence 555566667789999988742 21 1122 12 678987643 22222234333 4578999998874
No 101
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=94.63 E-value=3.5 Score=39.96 Aligned_cols=109 Identities=10% Similarity=0.045 Sum_probs=56.1
Q ss_pred ecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEe-c--CCcEEEEcCccCCeEEEE-eCCCC
Q 048017 137 VLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQIL-P--DNRIIVVGGRRVFTYEFY-PKIDS 212 (566)
Q Consensus 137 ~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L-~--dG~VyvvGG~~~~s~E~y-P~~~~ 212 (566)
+-+||+.+++|+.+ ..+++||.. ..+...... +..-...-..+.. + +|++++.|+.+ .++-+| ..+.
T Consensus 17 ~s~~g~~las~s~D---~~v~iw~~~---~~~~~~~~~-l~gH~~~V~~v~~s~~~~g~~l~s~s~D-~~v~iWd~~~~- 87 (297)
T 2pm7_B 17 MDYYGKRMATCSSD---KTIKIFEVE---GETHKLIDT-LTGHEGPVWRVDWAHPKFGTILASCSYD-GKVMIWKEENG- 87 (297)
T ss_dssp ECTTSSEEEEEETT---SCEEEEEBC---SSCBCCCEE-ECCCSSCEEEEEECCGGGCSEEEEEETT-TEEEEEEBSSS-
T ss_pred ECCCCCEEEEEeCC---CEEEEEecC---CCCcEEEEE-EccccCCeEEEEecCCCcCCEEEEEcCC-CEEEEEEcCCC-
Confidence 44689999999864 578999976 333332222 3221111122332 2 38888888865 456666 4321
Q ss_pred CCCeeeeccccccCCCCCCCCccceEEEecC--CcEEEEEcC--eeEEEeccCC
Q 048017 213 LSSSLYLRFLIETRDPGEENNLYPFLHLLPD--GNLFIFANR--RSILFDYINN 262 (566)
Q Consensus 213 ~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~--G~Ifv~Gg~--~~e~yDp~t~ 262 (566)
.+.....+..... .--.+...++ |++++.|+. ...+||..++
T Consensus 88 --~~~~~~~~~~h~~------~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~ 133 (297)
T 2pm7_B 88 --RWSQIAVHAVHSA------SVNSVQWAPHEYGPMLLVASSDGKVSVVEFKEN 133 (297)
T ss_dssp --CBCCCEEECCCSS------CEEEEEECCGGGCSEEEEEETTSEEEEEEBCSS
T ss_pred --ceEEEEEeecCCC------ceeEEEeCcCCCCcEEEEEECCCcEEEEEecCC
Confidence 2221111111000 0001222344 788888874 4667888765
No 102
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=94.57 E-value=3 Score=41.66 Aligned_cols=144 Identities=10% Similarity=-0.018 Sum_probs=68.8
Q ss_pred EEEEECCCCc-------EEeCcCCCcccccCCeecCC----C---cEEEEcCCCCCCCeEEEEcCCCCCCCc------cc
Q 048017 111 SVLYDIASNT-------FRPLLLQTDTWCSSGAVLSD----G---TLVQTGGYNVGDRVIRLFTPCNDEGCD------WV 170 (566)
Q Consensus 111 ~~~yDp~t~~-------w~~l~~~~~~~c~~~~~l~d----G---~l~vvGG~~~g~~~v~~ydP~~~~t~~------W~ 170 (566)
+.+||..+.+ ...+.. +..........++ | +++++|+.+ ..+.+||.. +.+ +.
T Consensus 38 i~iw~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~g~~~~~l~s~~~d---g~i~iw~~~---~~~~~~~~~~~ 110 (397)
T 1sq9_A 38 LKVWDNKLLDNENPKDKSYSHFV-HKSGLHHVDVLQAIERDAFELCLVATTSFS---GDLLFYRIT---REDETKKVIFE 110 (397)
T ss_dssp EEEEESBCCTTCCGGGGEEEEEC-CTTCEEEEEEEEEEETTTEEEEEEEEEETT---SCEEEEEEE---ECTTTCCEEEE
T ss_pred EEEEECCCcccccCCCcceEEec-CCCcEEEEEEecccccCCccccEEEEEcCC---CCEEEEEcc---CCcccccccce
Confidence 5677777665 222221 1111222344556 8 888988764 468888876 333 44
Q ss_pred ccCccccc---ccCcceEEEe----cCCcE-EEEcCccCCeEEEE-eCC------CCCCCeeeeccccc-----cCCCCC
Q 048017 171 ELSKNLWD---RRWYASNQIL----PDNRI-IVVGGRRVFTYEFY-PKI------DSLSSSLYLRFLIE-----TRDPGE 230 (566)
Q Consensus 171 ~~~~~M~~---~R~y~s~~~L----~dG~V-yvvGG~~~~s~E~y-P~~------~~~~~w~~~p~l~~-----~~d~~~ 230 (566)
.... ... ...-.+++.. ++++. +++|+.++ .+.+| ..+ ...-.|.....+.. ...
T Consensus 111 ~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 185 (397)
T 1sq9_A 111 KLDL-LDSDMKKHSFWALKWGASNDRLLSHRLVATDVKG-TTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTP--- 185 (397)
T ss_dssp EECC-SCTTGGGSCEEEEEEECCC----CEEEEEEETTS-CEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSS---
T ss_pred eecc-cccccCCCcEEEEEEeeccCCCCceEEEEEeCCC-cEEEEeCCccccccccceeeccCcceeeeeeccccCC---
Confidence 3322 110 1222344455 68888 88887664 34455 222 10011110001100 000
Q ss_pred CCCccceEEEecCCcEEEEEcC--eeEEEeccCCeEEEee
Q 048017 231 ENNLYPFLHLLPDGNLFIFANR--RSILFDYINNKLVKEF 268 (566)
Q Consensus 231 ~~~~yp~~~~l~~G~Ifv~Gg~--~~e~yDp~t~~W~~~~ 268 (566)
...-..+...++| +++.|+. ...+||..+.+....+
T Consensus 186 -~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~ 223 (397)
T 1sq9_A 186 -SQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNF 223 (397)
T ss_dssp -CCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEE
T ss_pred -CCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEE
Confidence 0011133445788 7778764 4678999887765444
No 103
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=94.57 E-value=3.3 Score=39.45 Aligned_cols=109 Identities=13% Similarity=0.108 Sum_probs=60.5
Q ss_pred eEEEEeeCCeEEEEeccCCCCCCCCCCCCccccCCCCCCCcccceEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEE
Q 048017 66 MHMQVLNNDKVIIFDRTDMGPSNLSLPIDKCRKEGDVGQLDCTAHSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQ 145 (566)
Q Consensus 66 ~h~~~l~~gkV~~~gg~~~~~s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v 145 (566)
+..+..++++.++.|+.+ ..+.+||..+.+....-..+..........+++++++
T Consensus 21 v~~~~~~~~~~l~s~~~d-------------------------g~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 75 (313)
T 3odt_A 21 VRDVVAVDDSKVASVSRD-------------------------GTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLL 75 (313)
T ss_dssp EEEEEEEETTEEEEEETT-------------------------SEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEE
T ss_pred cEEEEecCCCEEEEEEcC-------------------------CcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEE
Confidence 334444888888887643 1367888877665443322233333445667999999
Q ss_pred EcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEecCCcEEEEcCccCCeEEEE
Q 048017 146 TGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILPDNRIIVVGGRRVFTYEFY 207 (566)
Q Consensus 146 vGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y 207 (566)
+|+.+ ..+.+||... ......... +......-..... +++.++.|+.++ .+.+|
T Consensus 76 ~~~~d---g~i~~~~~~~--~~~~~~~~~-~~~~~~~i~~~~~-~~~~l~~~~~d~-~i~~~ 129 (313)
T 3odt_A 76 FGGKD---TMINGVPLFA--TSGEDPLYT-LIGHQGNVCSLSF-QDGVVISGSWDK-TAKVW 129 (313)
T ss_dssp EEETT---SCEEEEETTC--CTTSCC-CE-ECCCSSCEEEEEE-ETTEEEEEETTS-EEEEE
T ss_pred EecCC---CeEEEEEeee--cCCCCcccc-hhhcccCEEEEEe-cCCEEEEEeCCC-CEEEE
Confidence 99864 4577777652 112222222 3222222333444 788888887654 34444
No 104
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=94.48 E-value=1.2 Score=45.13 Aligned_cols=135 Identities=13% Similarity=0.104 Sum_probs=71.1
Q ss_pred eEEEEECCCCcEE-----eCcC--CCcccccCCeecCCC-cEEEEcCCCCCCCeEEEEcCCCCCCCcccccCccc--c-c
Q 048017 110 HSVLYDIASNTFR-----PLLL--QTDTWCSSGAVLSDG-TLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNL--W-D 178 (566)
Q Consensus 110 ~~~~yDp~t~~w~-----~l~~--~~~~~c~~~~~l~dG-~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M--~-~ 178 (566)
.+.+||..++... .+.. .+..........++| .++++|+.+ ..+.+||.. +.+... . + . .
T Consensus 105 ~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d---g~i~iwd~~---~~~~~~--~-~~~~~~ 175 (402)
T 2aq5_A 105 TVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCD---NVILVWDVG---TGAAVL--T-LGPDVH 175 (402)
T ss_dssp EEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETT---SCEEEEETT---TTEEEE--E-ECTTTC
T ss_pred eEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCC---CEEEEEECC---CCCccE--E-EecCCC
Confidence 3678888776431 1111 112222233455677 688888764 468999987 443321 1 2 1 2
Q ss_pred ccCcceEEEecCCcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEE---c--C
Q 048017 179 RRWYASNQILPDNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFA---N--R 252 (566)
Q Consensus 179 ~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~G---g--~ 252 (566)
...-.+.+..+||+.+++|+.++ .+.+| +.+. .. ...+...... ..--.+...++|++++.| + .
T Consensus 176 ~~~v~~~~~~~~~~~l~~~~~d~-~i~iwd~~~~---~~-~~~~~~~~~~-----~~~~~~~~~~~~~~l~~g~~~~~d~ 245 (402)
T 2aq5_A 176 PDTIYSVDWSRDGALICTSCRDK-RVRVIEPRKG---TV-VAEKDRPHEG-----TRPVHAVFVSEGKILTTGFSRMSER 245 (402)
T ss_dssp CSCEEEEEECTTSSCEEEEETTS-EEEEEETTTT---EE-EEEEECSSCS-----SSCCEEEECSTTEEEEEEECTTCCE
T ss_pred CCceEEEEECCCCCEEEEEecCC-cEEEEeCCCC---ce-eeeeccCCCC-----CcceEEEEcCCCcEEEEeccCCCCc
Confidence 22233445556899998888653 45666 4432 11 1111001000 001133456799999988 3 3
Q ss_pred eeEEEeccCCe
Q 048017 253 RSILFDYINNK 263 (566)
Q Consensus 253 ~~e~yDp~t~~ 263 (566)
...+||..+.+
T Consensus 246 ~i~iwd~~~~~ 256 (402)
T 2aq5_A 246 QVALWDTKHLE 256 (402)
T ss_dssp EEEEEETTBCS
T ss_pred eEEEEcCcccc
Confidence 46788887643
No 105
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=94.46 E-value=3.8 Score=39.65 Aligned_cols=165 Identities=9% Similarity=-0.063 Sum_probs=91.4
Q ss_pred CccceeEEEEeeCCeEEEEeccCCCCCCCCCCCCccccCCCCCCCcccceEEEEECCCCcEEeCcCCC-cccccCCeecC
Q 048017 61 IGISAMHMQVLNNDKVIIFDRTDMGPSNLSLPIDKCRKEGDVGQLDCTAHSVLYDIASNTFRPLLLQT-DTWCSSGAVLS 139 (566)
Q Consensus 61 ~~~~a~h~~~l~~gkV~~~gg~~~~~s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~-~~~c~~~~~l~ 139 (566)
.+....|...+.++++|+-.|.. +. ..+..+|++|++-..--.+. ..|.. +..+.
T Consensus 18 d~~~ftqGL~~~~~~LyestG~~-g~----------------------S~v~~vD~~tgkv~~~~~l~~~~fge-Gi~~~ 73 (243)
T 3mbr_X 18 DTTAFTEGLFYLRGHLYESTGET-GR----------------------SSVRKVDLETGRILQRAEVPPPYFGA-GIVAW 73 (243)
T ss_dssp CTTCCEEEEEEETTEEEEEECCT-TS----------------------CEEEEEETTTCCEEEEEECCTTCCEE-EEEEE
T ss_pred CCccccccEEEECCEEEEECCCC-CC----------------------ceEEEEECCCCCEEEEEeCCCCccee-EEEEe
Confidence 34455677777888888877643 11 24789999999886544333 33443 44555
Q ss_pred CCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEecCCcEEEEcCccCCeEEEE-eCCCCCCCeee
Q 048017 140 DGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILPDNRIIVVGGRRVFTYEFY-PKIDSLSSSLY 218 (566)
Q Consensus 140 dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~ 218 (566)
+++||++... .+.+.+||+. +.+ .+.. .+.+...-+.+ -.++++|+.=|+ ..+.++ |.+. ..-..
T Consensus 74 ~~~ly~ltw~---~~~v~v~D~~---tl~--~~~t-i~~~~~Gwglt-~dg~~L~vSdgs--~~l~~iDp~t~--~~~~~ 139 (243)
T 3mbr_X 74 RDRLIQLTWR---NHEGFVYDLA---TLT--PRAR-FRYPGEGWALT-SDDSHLYMSDGT--AVIRKLDPDTL--QQVGS 139 (243)
T ss_dssp TTEEEEEESS---SSEEEEEETT---TTE--EEEE-EECSSCCCEEE-ECSSCEEEECSS--SEEEEECTTTC--CEEEE
T ss_pred CCEEEEEEee---CCEEEEEECC---cCc--EEEE-EeCCCCceEEe-eCCCEEEEECCC--CeEEEEeCCCC--eEEEE
Confidence 8899998543 3688999997 433 2222 33332222333 324567776663 334455 6652 11111
Q ss_pred eccccccCCCCCCCCccceEEEecCCcEEEEE--cCeeEEEeccCCeEEEee
Q 048017 219 LRFLIETRDPGEENNLYPFLHLLPDGNLFIFA--NRRSILFDYINNKLVKEF 268 (566)
Q Consensus 219 ~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~G--g~~~e~yDp~t~~W~~~~ 268 (566)
.+.-.. . . .-.+.--....+|+||+-- .+...+.||++++....+
T Consensus 140 I~V~~~--g--~-~~~~lNeLe~~~G~lyanvw~s~~I~vIDp~tG~V~~~i 186 (243)
T 3mbr_X 140 IKVTAG--G--R-PLDNLNELEWVNGELLANVWLTSRIARIDPASGKVVAWI 186 (243)
T ss_dssp EECEET--T--E-ECCCEEEEEEETTEEEEEETTTTEEEEECTTTCBEEEEE
T ss_pred EEEccC--C--c-ccccceeeEEeCCEEEEEECCCCeEEEEECCCCCEEEEE
Confidence 111000 0 0 0001111223499999654 246788999999877544
No 106
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=94.25 E-value=1.9 Score=43.30 Aligned_cols=115 Identities=12% Similarity=0.085 Sum_probs=60.3
Q ss_pred CeecCC-CcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCccccc-------ccCcceEEEecCC-cEEEEcCccC--Ce
Q 048017 135 GAVLSD-GTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWD-------RRWYASNQILPDN-RIIVVGGRRV--FT 203 (566)
Q Consensus 135 ~~~l~d-G~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~-------~R~y~s~~~L~dG-~VyvvGG~~~--~s 203 (566)
....++ +.++++|+.+ ..+.+||.. +.+... . +.. ...-.+++..++| ++++.|+.++ ..
T Consensus 171 ~~~~~~~~~~l~~~~~d---g~v~iwd~~---~~~~~~--~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~ 241 (416)
T 2pm9_A 171 LAWNQSLAHVFASAGSS---NFASIWDLK---AKKEVI--H-LSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPS 241 (416)
T ss_dssp EEECSSCTTEEEEESSS---SCEEEEETT---TTEEEE--E-ECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCC
T ss_pred EEeCCCCCcEEEEEcCC---CCEEEEECC---CCCcce--E-EeccccccccCCceEEEEECCCCCCEEEEEECCCCCce
Confidence 344566 7899998864 568999987 433221 1 221 2223344455666 5788777653 14
Q ss_pred EEEE-eCCCCCCCeeeecccc-ccCCCCCCCCccceEEEec-CCcEEEEEcC--eeEEEeccCCeEEEee
Q 048017 204 YEFY-PKIDSLSSSLYLRFLI-ETRDPGEENNLYPFLHLLP-DGNLFIFANR--RSILFDYINNKLVKEF 268 (566)
Q Consensus 204 ~E~y-P~~~~~~~w~~~p~l~-~~~d~~~~~~~yp~~~~l~-~G~Ifv~Gg~--~~e~yDp~t~~W~~~~ 268 (566)
+.+| ..+. ... ...+. ... ..--.+...+ ++++++.|+. ...+||..+.+-...+
T Consensus 242 i~~~d~~~~---~~~-~~~~~~~~~------~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~ 301 (416)
T 2pm9_A 242 ILIWDLRNA---NTP-LQTLNQGHQ------KGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQF 301 (416)
T ss_dssp CCEEETTST---TSC-SBCCCSCCS------SCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEE
T ss_pred EEEEeCCCC---CCC-cEEeecCcc------CceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceee
Confidence 5566 3221 000 00011 000 0001222345 8888888875 4678999887655333
No 107
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=93.96 E-value=3.3 Score=40.05 Aligned_cols=119 Identities=13% Similarity=0.063 Sum_probs=66.6
Q ss_pred cccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEecCCcEEEEcCccCCeEEEE-
Q 048017 129 DTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILPDNRIIVVGGRRVFTYEFY- 207 (566)
Q Consensus 129 ~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y- 207 (566)
..|..+-. +.+++||+..|. .|.++++.+|+. +++=...-+ +...-+..+.+.. ++++|++...+ ..+-+|
T Consensus 20 ~~ftqGL~-~~~~~LyestG~-~g~S~v~~vD~~---tgkv~~~~~-l~~~~fgeGi~~~-~~~ly~ltw~~-~~v~v~D 91 (243)
T 3mbr_X 20 TAFTEGLF-YLRGHLYESTGE-TGRSSVRKVDLE---TGRILQRAE-VPPPYFGAGIVAW-RDRLIQLTWRN-HEGFVYD 91 (243)
T ss_dssp TCCEEEEE-EETTEEEEEECC-TTSCEEEEEETT---TCCEEEEEE-CCTTCCEEEEEEE-TTEEEEEESSS-SEEEEEE
T ss_pred ccccccEE-EECCEEEEECCC-CCCceEEEEECC---CCCEEEEEe-CCCCcceeEEEEe-CCEEEEEEeeC-CEEEEEE
Confidence 44555444 447899999886 366789999999 665443222 3332223344444 78999986543 344556
Q ss_pred eCCCCCCCeeeeccccccCCCCCCCCccceEEEecCC-cEEEEEc-CeeEEEeccCCeEEEeec
Q 048017 208 PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDG-NLFIFAN-RRSILFDYINNKLVKEFP 269 (566)
Q Consensus 208 P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G-~Ifv~Gg-~~~e~yDp~t~~W~~~~p 269 (566)
+++- ..-...+.. ..+.. ++.|| +||+.-| .....+||++.+..+.++
T Consensus 92 ~~tl--~~~~ti~~~-----------~~Gwg-lt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~ 141 (243)
T 3mbr_X 92 LATL--TPRARFRYP-----------GEGWA-LTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIK 141 (243)
T ss_dssp TTTT--EEEEEEECS-----------SCCCE-EEECSSCEEEECSSSEEEEECTTTCCEEEEEE
T ss_pred CCcC--cEEEEEeCC-----------CCceE-EeeCCCEEEEECCCCeEEEEeCCCCeEEEEEE
Confidence 4431 011122211 11222 23444 5666533 456789999988765553
No 108
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=93.76 E-value=5.4 Score=38.82 Aligned_cols=87 Identities=9% Similarity=0.099 Sum_probs=48.3
Q ss_pred EEEEECCCCcEEeCc--CCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEE-
Q 048017 111 SVLYDIASNTFRPLL--LQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQI- 187 (566)
Q Consensus 111 ~~~yDp~t~~w~~l~--~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~- 187 (566)
+.+||..++...... ..+..........++|+.+++|+.+ ..+.+||.. +.+..... .....-.+.+.
T Consensus 66 i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---g~v~iwd~~---~~~~~~~~---~~~~~v~~~~~~ 136 (368)
T 3mmy_A 66 VRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD---KTAKMWDLS---SNQAIQIA---QHDAPVKTIHWI 136 (368)
T ss_dssp EEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT---SEEEEEETT---TTEEEEEE---ECSSCEEEEEEE
T ss_pred EEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC---CcEEEEEcC---CCCceeec---cccCceEEEEEE
Confidence 678888763322211 1122222234455689999998764 579999987 54433221 11221122333
Q ss_pred -ecCCcEEEEcCccCCeEEEE
Q 048017 188 -LPDNRIIVVGGRRVFTYEFY 207 (566)
Q Consensus 188 -L~dG~VyvvGG~~~~s~E~y 207 (566)
-++++.++.|+.++ .+.+|
T Consensus 137 ~~~~~~~l~~~~~dg-~i~vw 156 (368)
T 3mmy_A 137 KAPNYSCVMTGSWDK-TLKFW 156 (368)
T ss_dssp ECSSCEEEEEEETTS-EEEEE
T ss_pred eCCCCCEEEEccCCC-cEEEE
Confidence 46888888888653 45566
No 109
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=93.73 E-value=2.7 Score=41.12 Aligned_cols=104 Identities=12% Similarity=0.135 Sum_probs=55.5
Q ss_pred CcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccc-cccCcceEEEec-CCcEEEEcCccCCeEEEE-eCCCCCCCee
Q 048017 141 GTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLW-DRRWYASNQILP-DNRIIVVGGRRVFTYEFY-PKIDSLSSSL 217 (566)
Q Consensus 141 G~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~-~~R~y~s~~~L~-dG~VyvvGG~~~~s~E~y-P~~~~~~~w~ 217 (566)
|+++++|+.+ ..+.+||.. +.+- ... +. ....-.+....+ ++++++.|+.++ .+.+| ..+. ...
T Consensus 85 ~~~l~~~~~d---g~i~v~d~~---~~~~--~~~-~~~~~~~i~~~~~~~~~~~~l~s~~~dg-~i~iwd~~~~---~~~ 151 (366)
T 3k26_A 85 HPLLAVAGSR---GIIRIINPI---TMQC--IKH-YVGHGNAINELKFHPRDPNLLLSVSKDH-ALRLWNIQTD---TLV 151 (366)
T ss_dssp CEEEEEEETT---CEEEEECTT---TCCE--EEE-EESCCSCEEEEEECSSCTTEEEEEETTS-CEEEEETTTT---EEE
T ss_pred CCEEEEecCC---CEEEEEEch---hceE--eee-ecCCCCcEEEEEECCCCCCEEEEEeCCC-eEEEEEeecC---eEE
Confidence 7889998864 579999987 4322 111 22 122222344445 789999888764 45566 3321 111
Q ss_pred -eeccccccCCCCCCCCccceEEEecCCcEEEEEcC--eeEEEeccCCe
Q 048017 218 -YLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANR--RSILFDYINNK 263 (566)
Q Consensus 218 -~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~--~~e~yDp~t~~ 263 (566)
....+..... .--.+...++|+.++.|+. ...+||..+.+
T Consensus 152 ~~~~~~~~~~~------~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 194 (366)
T 3k26_A 152 AIFGGVEGHRD------EVLSADYDLLGEKIMSCGMDHSLKLWRINSKR 194 (366)
T ss_dssp EEECSTTSCSS------CEEEEEECTTSSEEEEEETTSCEEEEESCSHH
T ss_pred EEecccccccC------ceeEEEECCCCCEEEEecCCCCEEEEECCCCc
Confidence 1110011100 0112233478988888874 46788887654
No 110
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=93.70 E-value=7.1 Score=39.98 Aligned_cols=130 Identities=11% Similarity=0.139 Sum_probs=67.3
Q ss_pred EEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEecC
Q 048017 111 SVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILPD 190 (566)
Q Consensus 111 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~d 190 (566)
+.+||..+.+-...-..+... -..+..++.++++|+.+ ..+.+||.. +.+-. .. +......-.+... +
T Consensus 141 i~vwd~~~~~~~~~~~~h~~~--v~~~~~~~~~l~s~~~d---g~i~vwd~~---~~~~~--~~-~~~h~~~v~~~~~-~ 208 (445)
T 2ovr_B 141 LKVWSAVTGKCLRTLVGHTGG--VWSSQMRDNIIISGSTD---RTLKVWNAE---TGECI--HT-LYGHTSTVRCMHL-H 208 (445)
T ss_dssp EEEEETTTCCEEEECCCCSSC--EEEEEEETTEEEEEETT---SCEEEEETT---TTEEE--EE-ECCCSSCEEEEEE-E
T ss_pred EEEEECCCCcEEEEEcCCCCC--EEEEEecCCEEEEEeCC---CeEEEEECC---cCcEE--EE-ECCCCCcEEEEEe-c
Confidence 678998877643221111111 11122257788888764 578999987 44321 11 2222222233344 6
Q ss_pred CcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEcC--eeEEEeccCCeEEE
Q 048017 191 NRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANR--RSILFDYINNKLVK 266 (566)
Q Consensus 191 G~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~--~~e~yDp~t~~W~~ 266 (566)
++.+++|+.+ ..+.+| ..+. ... . .+... ..+...+..+|+.++.|+. ...+||..+.+-..
T Consensus 209 ~~~l~s~s~d-g~i~~wd~~~~---~~~-~-~~~~~--------~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 273 (445)
T 2ovr_B 209 EKRVVSGSRD-ATLRVWDIETG---QCL-H-VLMGH--------VAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLH 273 (445)
T ss_dssp TTEEEEEETT-SEEEEEESSSC---CEE-E-EEECC--------SSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEE
T ss_pred CCEEEEEeCC-CEEEEEECCCC---cEE-E-EEcCC--------cccEEEEEECCCEEEEEcCCCEEEEEECCCCcEeE
Confidence 7777877765 355666 3321 111 0 01111 1122233448888888874 46789998876553
No 111
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=93.58 E-value=5.8 Score=38.65 Aligned_cols=91 Identities=10% Similarity=-0.014 Sum_probs=50.1
Q ss_pred eEEEEECCCCcEEeCcCCCcccccCCeecC-CCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccc-cccCcceEEE
Q 048017 110 HSVLYDIASNTFRPLLLQTDTWCSSGAVLS-DGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLW-DRRWYASNQI 187 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~-dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~-~~R~y~s~~~ 187 (566)
.+.+||..+++-...-..+.....+....+ +++++++|+.+ ..+.+||.. +.+-...-..+. ....-.+++.
T Consensus 96 ~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~d---g~i~iwd~~---~~~~~~~~~~~~~~~~~v~~~~~ 169 (366)
T 3k26_A 96 IIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKD---HALRLWNIQ---TDTLVAIFGGVEGHRDEVLSADY 169 (366)
T ss_dssp EEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETT---SCEEEEETT---TTEEEEEECSTTSCSSCEEEEEE
T ss_pred EEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCC---CeEEEEEee---cCeEEEEecccccccCceeEEEE
Confidence 367888887654332112222222334556 88999998864 568999987 433221100011 1222233444
Q ss_pred ecCCcEEEEcCccCCeEEEE
Q 048017 188 LPDNRIIVVGGRRVFTYEFY 207 (566)
Q Consensus 188 L~dG~VyvvGG~~~~s~E~y 207 (566)
.++|+.++.|+.++ .+.+|
T Consensus 170 ~~~~~~l~~~~~dg-~i~i~ 188 (366)
T 3k26_A 170 DLLGEKIMSCGMDH-SLKLW 188 (366)
T ss_dssp CTTSSEEEEEETTS-CEEEE
T ss_pred CCCCCEEEEecCCC-CEEEE
Confidence 56899999888764 34455
No 112
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=93.58 E-value=3.2 Score=38.91 Aligned_cols=81 Identities=10% Similarity=0.148 Sum_probs=50.0
Q ss_pred eEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCC-CcccccCcccccccCcceEEEe
Q 048017 110 HSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEG-CDWVELSKNLWDRRWYASNQIL 188 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t-~~W~~~~~~M~~~R~y~s~~~L 188 (566)
.+.+||+.+++.+.+... .....+....+||+.+++++. ..+.++|.. + .+...... ..........+.-
T Consensus 23 ~i~~~d~~~~~~~~~~~~-~~~v~~~~~spdg~~l~~~~~----~~i~~~d~~---~~~~~~~~~~-~~~~~~~~~~~~s 93 (297)
T 2ojh_A 23 SIEIFNIRTRKMRVVWQT-PELFEAPNWSPDGKYLLLNSE----GLLYRLSLA---GDPSPEKVDT-GFATICNNDHGIS 93 (297)
T ss_dssp EEEEEETTTTEEEEEEEE-SSCCEEEEECTTSSEEEEEET----TEEEEEESS---SCCSCEECCC-TTCCCBCSCCEEC
T ss_pred eEEEEeCCCCceeeeccC-CcceEeeEECCCCCEEEEEcC----CeEEEEeCC---CCCCceEecc-ccccccccceEEC
Confidence 578899999887755432 222233456689998888752 479999987 5 55444332 1111222334555
Q ss_pred cCCcEEEEcCc
Q 048017 189 PDNRIIVVGGR 199 (566)
Q Consensus 189 ~dG~VyvvGG~ 199 (566)
+||+.++.++.
T Consensus 94 pdg~~l~~~~~ 104 (297)
T 2ojh_A 94 PDGALYAISDK 104 (297)
T ss_dssp TTSSEEEEEEC
T ss_pred CCCCEEEEEEe
Confidence 68988887774
No 113
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=93.49 E-value=3.1 Score=41.75 Aligned_cols=132 Identities=14% Similarity=0.180 Sum_probs=62.0
Q ss_pred EEEEECCCCcEEeCcC----CCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccC-cceE
Q 048017 111 SVLYDIASNTFRPLLL----QTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRW-YASN 185 (566)
Q Consensus 111 ~~~yDp~t~~w~~l~~----~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~-y~s~ 185 (566)
+.+||..+++-..... .+.....+.++.+||+.+++|+.+ ..+++||.. +.+-. .. +..... -.++
T Consensus 117 v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~d---g~v~iwd~~---~~~~~--~~-~~~h~~~v~~v 187 (357)
T 4g56_B 117 VELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKD---FSVKVWDLS---QKAVL--KS-YNAHSSEVNCV 187 (357)
T ss_dssp EEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETT---SCEEEEETT---TTEEE--EE-ECCCSSCEEEE
T ss_pred EEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCC---CeEEEEECC---CCcEE--EE-EcCCCCCEEEE
Confidence 6778887765433221 112222234566899999999864 568999987 44322 11 222111 1223
Q ss_pred EEecCC-cEEEEcCccCCeEEEE-eCCCCCCCee-eeccccccCCCCCCCCccceEE-EecC-CcEEEEEcC--eeEEEe
Q 048017 186 QILPDN-RIIVVGGRRVFTYEFY-PKIDSLSSSL-YLRFLIETRDPGEENNLYPFLH-LLPD-GNLFIFANR--RSILFD 258 (566)
Q Consensus 186 ~~L~dG-~VyvvGG~~~~s~E~y-P~~~~~~~w~-~~p~l~~~~d~~~~~~~yp~~~-~l~~-G~Ifv~Gg~--~~e~yD 258 (566)
+.-+++ .+++.||.++ .+.+| ..+. ... ...... ........ ..|+ +++++.|+. ...+||
T Consensus 188 ~~s~~~~~~~~s~~~dg-~v~~wd~~~~---~~~~~~~~~~--------~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd 255 (357)
T 4g56_B 188 AACPGKDTIFLSCGEDG-RILLWDTRKP---KPATRIDFCA--------SDTIPTSVTWHPEKDDTFACGDETGNVSLVN 255 (357)
T ss_dssp EECTTCSSCEEEEETTS-CEEECCTTSS---SCBCBCCCTT--------CCSCEEEEEECTTSTTEEEEEESSSCEEEEE
T ss_pred EEccCCCceeeeeccCC-ceEEEECCCC---ceeeeeeecc--------ccccccchhhhhcccceEEEeecccceeEEE
Confidence 333455 4677777653 45566 3321 111 111100 01111222 2344 678888875 467899
Q ss_pred ccCCe
Q 048017 259 YINNK 263 (566)
Q Consensus 259 p~t~~ 263 (566)
.++.+
T Consensus 256 ~~~~~ 260 (357)
T 4g56_B 256 IKNPD 260 (357)
T ss_dssp SSCGG
T ss_pred CCCCc
Confidence 88765
No 114
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=93.43 E-value=7.3 Score=39.34 Aligned_cols=137 Identities=11% Similarity=0.108 Sum_probs=69.5
Q ss_pred eEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccc-cccCcceEEEe
Q 048017 110 HSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLW-DRRWYASNQIL 188 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~-~~R~y~s~~~L 188 (566)
.+.+||..+++....-..+... ...+..++.++++|+.+ ..+.+||.. ...- .... +. ....-.+.+..
T Consensus 157 ~i~iwd~~~~~~~~~~~~~~~~--v~~~~~~~~~l~~~~~d---g~i~i~d~~---~~~~-~~~~-~~~~~~~v~~~~~~ 226 (401)
T 4aez_A 157 LVDIYDVESQTKLRTMAGHQAR--VGCLSWNRHVLSSGSRS---GAIHHHDVR---IANH-QIGT-LQGHSSEVCGLAWR 226 (401)
T ss_dssp CEEEEETTTCCEEEEECCCSSC--EEEEEEETTEEEEEETT---SEEEEEETT---SSSC-EEEE-EECCSSCEEEEEEC
T ss_pred eEEEEECcCCeEEEEecCCCCc--eEEEEECCCEEEEEcCC---CCEEEEecc---cCcc-eeeE-EcCCCCCeeEEEEc
Confidence 4778888776643322111111 11222378888888864 578899986 2211 1111 21 12222344455
Q ss_pred cCCcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceEEEecC-CcEEEEEc----CeeEEEeccCC
Q 048017 189 PDNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPD-GNLFIFAN----RRSILFDYINN 262 (566)
Q Consensus 189 ~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~-G~Ifv~Gg----~~~e~yDp~t~ 262 (566)
+||+.+++|+.++ .+.+| ..+. ... ..+ ..... .--.+...++ ..+++.|+ ....+||..++
T Consensus 227 ~~~~~l~s~~~d~-~v~iwd~~~~---~~~-~~~-~~~~~------~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~ 294 (401)
T 4aez_A 227 SDGLQLASGGNDN-VVQIWDARSS---IPK-FTK-TNHNA------AVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATG 294 (401)
T ss_dssp TTSSEEEEEETTS-CEEEEETTCS---SEE-EEE-CCCSS------CCCEEEECTTSTTEEEEECCTTTCEEEEEETTTC
T ss_pred CCCCEEEEEeCCC-eEEEccCCCC---Ccc-EEe-cCCcc------eEEEEEECCCCCCEEEEecCCCCCEEEEEECCCC
Confidence 6899999998764 45566 3221 111 111 00000 0112333454 46777764 35778999887
Q ss_pred eEEEee
Q 048017 263 KLVKEF 268 (566)
Q Consensus 263 ~W~~~~ 268 (566)
+....+
T Consensus 295 ~~~~~~ 300 (401)
T 4aez_A 295 ARVNTV 300 (401)
T ss_dssp CEEEEE
T ss_pred CEEEEE
Confidence 755433
No 115
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=93.26 E-value=2.3 Score=42.74 Aligned_cols=136 Identities=9% Similarity=-0.002 Sum_probs=66.5
Q ss_pred EEEEECCCCcEEeCcCCCcccccCCeecCCC-cEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEE-e
Q 048017 111 SVLYDIASNTFRPLLLQTDTWCSSGAVLSDG-TLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQI-L 188 (566)
Q Consensus 111 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG-~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~-L 188 (566)
+.+||..+++....-..+.....+.++.+++ .++++||.+ ..+++||.. +.+-...-. +........++. -
T Consensus 163 v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~d---g~v~~wd~~---~~~~~~~~~-~~~~~~~v~~v~~s 235 (357)
T 4g56_B 163 VKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGED---GRILLWDTR---KPKPATRID-FCASDTIPTSVTWH 235 (357)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETT---SCEEECCTT---SSSCBCBCC-CTTCCSCEEEEEEC
T ss_pred EEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccC---CceEEEECC---CCceeeeee-eccccccccchhhh
Confidence 6789998876543322222211223334555 477777753 568999987 443222111 111222222333 3
Q ss_pred cC-CcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceEEEecCC-cEEEEEcC--eeEEEeccCCe
Q 048017 189 PD-NRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDG-NLFIFANR--RSILFDYINNK 263 (566)
Q Consensus 189 ~d-G~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G-~Ifv~Gg~--~~e~yDp~t~~ 263 (566)
++ ++++++|+.+. .+.+| ..+. ....... ... ..--.+...++| ++++.|+. .+.+||.++++
T Consensus 236 p~~~~~la~g~~d~-~i~~wd~~~~--~~~~~~~---~~~------~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~ 303 (357)
T 4g56_B 236 PEKDDTFACGDETG-NVSLVNIKNP--DSAQTSA---VHS------QNITGLAYSYHSSPFLASISEDCTVAVLDADFSE 303 (357)
T ss_dssp TTSTTEEEEEESSS-CEEEEESSCG--GGCEEEC---CCS------SCEEEEEECSSSSCCEEEEETTSCEEEECTTSCE
T ss_pred hcccceEEEeeccc-ceeEEECCCC--cEeEEEe---ccc------eeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCc
Confidence 34 57888877653 45566 3321 0111111 100 000112223566 56666764 47789999887
Q ss_pred EE
Q 048017 264 LV 265 (566)
Q Consensus 264 W~ 265 (566)
..
T Consensus 304 ~~ 305 (357)
T 4g56_B 304 VF 305 (357)
T ss_dssp EE
T ss_pred Ee
Confidence 65
No 116
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=93.26 E-value=3.9 Score=40.59 Aligned_cols=112 Identities=17% Similarity=0.169 Sum_probs=55.7
Q ss_pred CeecC-CCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcc----------cc-cccCcceEEEec-CCcEEEEcCccC
Q 048017 135 GAVLS-DGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKN----------LW-DRRWYASNQILP-DNRIIVVGGRRV 201 (566)
Q Consensus 135 ~~~l~-dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~----------M~-~~R~y~s~~~L~-dG~VyvvGG~~~ 201 (566)
....+ +|+++++|+.+ ..+.+||.. +.+....... .. ....-.+++..+ ++++++.|+.++
T Consensus 49 ~~~s~~~~~~l~~~~~d---g~i~iw~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~ 122 (408)
T 4a11_B 49 LDIEPVEGRYMLSGGSD---GVIVLYDLE---NSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDK 122 (408)
T ss_dssp EEECTTTCCEEEEEETT---SCEEEEECC---CCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTS
T ss_pred EEEecCCCCEEEEEcCC---CeEEEEECC---CCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCC
Confidence 44556 89999999864 468899987 3332211100 00 112222333445 677888877653
Q ss_pred CeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceEEEec---CCcEEEEEcC--eeEEEeccCCeEE
Q 048017 202 FTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLP---DGNLFIFANR--RSILFDYINNKLV 265 (566)
Q Consensus 202 ~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~---~G~Ifv~Gg~--~~e~yDp~t~~W~ 265 (566)
.+.+| ..+. ......... . .. ......+ ++++++.|+. ...+||..+.+..
T Consensus 123 -~i~iwd~~~~--~~~~~~~~~-~--------~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 179 (408)
T 4a11_B 123 -TLKVWDTNTL--QTADVFNFE-E--------TV-YSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCS 179 (408)
T ss_dssp -EEEEEETTTT--EEEEEEECS-S--------CE-EEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCC
T ss_pred -eEEEeeCCCC--ccceeccCC-C--------ce-eeeEeecCCCCCcEEEEEcCCCeEEEEeCCCccee
Confidence 45566 3221 001111110 0 00 1112223 5557777764 4678898876543
No 117
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=93.14 E-value=6.4 Score=39.11 Aligned_cols=146 Identities=13% Similarity=0.086 Sum_probs=70.0
Q ss_pred EEEEECCCCc------EEeCcCCC----cccccCCeec----CCCcE-EEEcCCCCCCCeEEEEcCCC------CCCCcc
Q 048017 111 SVLYDIASNT------FRPLLLQT----DTWCSSGAVL----SDGTL-VQTGGYNVGDRVIRLFTPCN------DEGCDW 169 (566)
Q Consensus 111 ~~~yDp~t~~------w~~l~~~~----~~~c~~~~~l----~dG~l-~vvGG~~~g~~~v~~ydP~~------~~t~~W 169 (566)
+.+||..+++ +..+.... .......... ++++. +++|+.+ ..+.+||... ...-.|
T Consensus 93 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~ 169 (397)
T 1sq9_A 93 LLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK---GTTYIWKFHPFADESNSLTLNW 169 (397)
T ss_dssp EEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT---SCEEEEEEESSSSHHHHTTTCC
T ss_pred EEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC---CcEEEEeCCccccccccceeec
Confidence 6678877766 55554331 1222234455 68888 8888764 4688888762 001112
Q ss_pred cccCcccc--------cccCcceEEEecCCcEEEEcCccCCeEEEE-eCCCCCCCee-eeccccccCCCCCCCCccceEE
Q 048017 170 VELSKNLW--------DRRWYASNQILPDNRIIVVGGRRVFTYEFY-PKIDSLSSSL-YLRFLIETRDPGEENNLYPFLH 239 (566)
Q Consensus 170 ~~~~~~M~--------~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~-~~p~l~~~~d~~~~~~~yp~~~ 239 (566)
..... +. ....-.+++..++| .+++|+.+ ..+.+| ..+. ... .......... ....--.+.
T Consensus 170 ~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d-g~i~i~d~~~~---~~~~~~~~~~~h~~---~~~~i~~i~ 240 (397)
T 1sq9_A 170 SPTLE-LQGTVESPMTPSQFATSVDISERG-LIATGFNN-GTVQISELSTL---RPLYNFESQHSMIN---NSNSIRSVK 240 (397)
T ss_dssp CCEEE-EEEEECCSSSSCCCCCEEEECTTS-EEEEECTT-SEEEEEETTTT---EEEEEEECCC---C---CCCCEEEEE
T ss_pred cCcce-eeeeeccccCCCCCceEEEECCCc-eEEEEeCC-CcEEEEECCCC---ceeEEEeccccccc---cCCccceEE
Confidence 21111 21 12223345556678 77777755 345566 3321 111 1111000000 000011223
Q ss_pred EecCCcEEEEEcCe-----eEEEeccCCeEEEee
Q 048017 240 LLPDGNLFIFANRR-----SILFDYINNKLVKEF 268 (566)
Q Consensus 240 ~l~~G~Ifv~Gg~~-----~e~yDp~t~~W~~~~ 268 (566)
..++|++++.|+.+ ..+||..+.+-...+
T Consensus 241 ~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~ 274 (397)
T 1sq9_A 241 FSPQGSLLAIAHDSNSFGCITLYETEFGERIGSL 274 (397)
T ss_dssp ECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEE
T ss_pred ECCCCCEEEEEecCCCCceEEEEECCCCccccee
Confidence 45689988888754 567998887654333
No 118
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=93.12 E-value=8.7 Score=39.33 Aligned_cols=139 Identities=12% Similarity=0.061 Sum_probs=68.3
Q ss_pred eEEEEECCCCcEEeCcCCCcc--cccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCc-------------
Q 048017 110 HSVLYDIASNTFRPLLLQTDT--WCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSK------------- 174 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~~~--~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~------------- 174 (566)
.+.+||..+++....-..+.. .|-.-....++..+++|+.+ ..+.+||.. +.+-.....
T Consensus 184 ~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d---~~i~vwd~~---~~~~~~~~~~~~~~~~~~~~~~ 257 (464)
T 3v7d_B 184 TVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRD---NTLHVWKLP---KESSVPDHGEEHDYPLVFHTPE 257 (464)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETT---SCEEEEECC---CCCCC------CCSSEEESCGG
T ss_pred CEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCC---CcEEEeeCC---CCcccccccccCCcceEeeccC
Confidence 367899888764432221111 11111112578888988864 467888876 222110000
Q ss_pred ------ccccccCcceEEEecCCcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEE
Q 048017 175 ------NLWDRRWYASNQILPDNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLF 247 (566)
Q Consensus 175 ------~M~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~If 247 (566)
...........+.-++++.+++|+.++ .+.+| ..+. .. ... +.... ..--.+...++|+.+
T Consensus 258 ~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~-~i~vwd~~~~---~~-~~~-~~~~~------~~v~~~~~~~~~~~l 325 (464)
T 3v7d_B 258 ENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDN-TLIVWDVAQM---KC-LYI-LSGHT------DRIYSTIYDHERKRC 325 (464)
T ss_dssp GCTTEEEEECCCSSCEEEEEEETTEEEEEETTS-CEEEEETTTT---EE-EEE-ECCCS------SCEEEEEEETTTTEE
T ss_pred CCeEEEEEccCccceEEEEcCCCCEEEEEeCCC-eEEEEECCCC---cE-EEE-ecCCC------CCEEEEEEcCCCCEE
Confidence 000111111222234788888888764 35566 2221 11 111 11100 011123345788888
Q ss_pred EEEcC--eeEEEeccCCeEEE
Q 048017 248 IFANR--RSILFDYINNKLVK 266 (566)
Q Consensus 248 v~Gg~--~~e~yDp~t~~W~~ 266 (566)
+.|+. ...+||..+++-..
T Consensus 326 ~sg~~dg~i~vwd~~~~~~~~ 346 (464)
T 3v7d_B 326 ISASMDTTIRIWDLENGELMY 346 (464)
T ss_dssp EEEETTSCEEEEETTTTEEEE
T ss_pred EEEeCCCcEEEEECCCCcEEE
Confidence 88875 46789998887553
No 119
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=93.08 E-value=4.5 Score=39.50 Aligned_cols=117 Identities=9% Similarity=0.059 Sum_probs=63.6
Q ss_pred CceEEccCCCccceeEEEEeeCCeEEEEeccCCCCCCCCCCCCccccCCCCCCCcccceEEEEECCCCcEEeCcCCCccc
Q 048017 52 GQWVLLQSSIGISAMHMQVLNNDKVIIFDRTDMGPSNLSLPIDKCRKEGDVGQLDCTAHSVLYDIASNTFRPLLLQTDTW 131 (566)
Q Consensus 52 g~W~~l~~~~~~~a~h~~~l~~gkV~~~gg~~~~~s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~~ 131 (566)
..|..+... .......+.-++|++|+.+..+ ..+.+||+++++++.+.......
T Consensus 35 ~~~~~~~~~-~~~~~~~~~~~~g~l~~~~~~~-------------------------~~i~~~d~~~~~~~~~~~~~~~~ 88 (333)
T 2dg1_A 35 EPWLEISKK-GLQLEGLNFDRQGQLFLLDVFE-------------------------GNIFKINPETKEIKRPFVSHKAN 88 (333)
T ss_dssp EEEEEEESS-CCCEEEEEECTTSCEEEEETTT-------------------------CEEEEECTTTCCEEEEEECSSSS
T ss_pred ceeEEEecc-CccccCcEECCCCCEEEEECCC-------------------------CEEEEEeCCCCcEEEEeeCCCCC
Confidence 355555432 1222233444689988876532 13678999988877653221112
Q ss_pred ccCCeecCCCcEEEEcCCC-CCCCeEEEEcCCCCCCCcccc-cCcccccccCcceEEEecCCcEEEEcC
Q 048017 132 CSSGAVLSDGTLVQTGGYN-VGDRVIRLFTPCNDEGCDWVE-LSKNLWDRRWYASNQILPDNRIIVVGG 198 (566)
Q Consensus 132 c~~~~~l~dG~l~vvGG~~-~g~~~v~~ydP~~~~t~~W~~-~~~~M~~~R~y~s~~~L~dG~VyvvGG 198 (566)
-.+.+.-+||++++..... .....+.+||+. +.+... ... ......-...+.-+||++|+...
T Consensus 89 ~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~---~~~~~~~~~~-~~~~~~~~~i~~d~~g~l~v~~~ 153 (333)
T 2dg1_A 89 PAAIKIHKDGRLFVCYLGDFKSTGGIFAATEN---GDNLQDIIED-LSTAYCIDDMVFDSKGGFYFTDF 153 (333)
T ss_dssp EEEEEECTTSCEEEEECTTSSSCCEEEEECTT---SCSCEEEECS-SSSCCCEEEEEECTTSCEEEEEC
T ss_pred cceEEECCCCcEEEEeCCCCCCCceEEEEeCC---CCEEEEEEcc-CccCCcccceEECCCCCEEEEec
Confidence 2233445789998875422 123578999998 544331 111 11122223445556899998654
No 120
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=93.08 E-value=6.7 Score=37.86 Aligned_cols=64 Identities=22% Similarity=0.266 Sum_probs=36.4
Q ss_pred CeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEecCCcEEEEcCccCCeEEEE
Q 048017 135 GAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILPDNRIIVVGGRRVFTYEFY 207 (566)
Q Consensus 135 ~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y 207 (566)
..+.+||+++++|+.+ ..+.+++.. ........ .............++++.++.|+.++. +.+|
T Consensus 92 ~~~s~dg~~l~s~~~d---~~i~~~~~~---~~~~~~~~--~~~~~~~~~~~~~~~~~~l~s~s~d~~-~~~~ 155 (340)
T 4aow_A 92 VVISSDGQFALSGSWD---GTLRLWDLT---TGTTTRRF--VGHTKDVLSVAFSSDNRQIVSGSRDKT-IKLW 155 (340)
T ss_dssp EEECTTSSEEEEEETT---SEEEEEETT---TTEEEEEE--ECCSSCEEEEEECTTSSCEEEEETTSC-EEEE
T ss_pred EEECCCCCEEEEEccc---ccceEEeec---ccceeeee--cCCCCceeEEEEeecCccceeecCCCe-EEEE
Confidence 3455799999999864 467788876 33322211 111222233444557888888876542 3344
No 121
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=93.02 E-value=8 Score=38.64 Aligned_cols=112 Identities=8% Similarity=0.038 Sum_probs=57.7
Q ss_pred CeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCccccc------ccCcceEEEecCCcEEEEcCccCCeEEEE-
Q 048017 135 GAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWD------RRWYASNQILPDNRIIVVGGRRVFTYEFY- 207 (566)
Q Consensus 135 ~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~------~R~y~s~~~L~dG~VyvvGG~~~~s~E~y- 207 (566)
.-++.+++||+.... ..+.+||+.+. ...|+.-.. ... .....+..++.+|+||+.... ..+-.+
T Consensus 48 ~p~v~~~~v~~~~~~----g~v~a~d~~tG-~~~W~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~--g~l~a~d 119 (376)
T 3q7m_A 48 HPALADNVVYAADRA----GLVKALNADDG-KEIWSVSLA-EKDGWFSKEPALLSGGVTVSGGHVYIGSEK--AQVYALN 119 (376)
T ss_dssp CCEEETTEEEEECTT----SEEEEEETTTC-CEEEEEECC-C---CCSCCCCCEEEEEEEETTEEEEEETT--SEEEEEE
T ss_pred ccEEECCEEEEEcCC----CeEEEEEccCC-ceeeeecCc-cccccccccCcccccCceEeCCEEEEEcCC--CEEEEEE
Confidence 445568888887542 36889999732 446864322 110 112223444558888885432 233344
Q ss_pred eCCCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEcC-eeEEEeccCCe--EEE
Q 048017 208 PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANR-RSILFDYINNK--LVK 266 (566)
Q Consensus 208 P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~-~~e~yDp~t~~--W~~ 266 (566)
+++. ...|... .... ...-| +..+|+||+.... ....||+++++ |..
T Consensus 120 ~~tG-~~~W~~~-~~~~-------~~~~p---~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~ 169 (376)
T 3q7m_A 120 TSDG-TVAWQTK-VAGE-------ALSRP---VVSDGLVLIHTSNGQLQALNEADGAVKWTV 169 (376)
T ss_dssp TTTC-CEEEEEE-CSSC-------CCSCC---EEETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCCC-CEEEEEe-CCCc-------eEcCC---EEECCEEEEEcCCCeEEEEECCCCcEEEEE
Confidence 4432 1235321 1000 00112 3447888875543 47789998875 653
No 122
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=92.95 E-value=2 Score=41.98 Aligned_cols=141 Identities=16% Similarity=0.067 Sum_probs=72.2
Q ss_pred eEEEEECCCCcEEeCcCCCcc-cccCCeecCCCc-EEEEcCCCCCCCeEEEEcCCCCCCCcccccCccccc-----ccCc
Q 048017 110 HSVLYDIASNTFRPLLLQTDT-WCSSGAVLSDGT-LVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWD-----RRWY 182 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~~~-~c~~~~~l~dG~-l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~-----~R~y 182 (566)
.+.+||+++++....-..... .....++.+||+ +|+.+.. ...+.+||+. +.+....-. +.. ...-
T Consensus 22 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~---~~~i~~~d~~---t~~~~~~~~-~~~~~~~~~~~~ 94 (349)
T 1jmx_B 22 NLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH---YGDIYGIDLD---TCKNTFHAN-LSSVPGEVGRSM 94 (349)
T ss_dssp EEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETT---TTEEEEEETT---TTEEEEEEE-SCCSTTEEEECS
T ss_pred eEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCC---CCcEEEEeCC---CCcEEEEEE-cccccccccccc
Confidence 377899988876432211111 123345567887 5666532 3578999987 544332111 111 1112
Q ss_pred ceEEEecCCcEEEEcCcc-----------CCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccc-eEEEecCCcEEEE
Q 048017 183 ASNQILPDNRIIVVGGRR-----------VFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYP-FLHLLPDGNLFIF 249 (566)
Q Consensus 183 ~s~~~L~dG~VyvvGG~~-----------~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp-~~~~l~~G~Ifv~ 249 (566)
...+.-+||+.+++++.+ ...+.+| ..+. ..-........ ...+ .+...+||++|+
T Consensus 95 ~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~--~~~~~~~~~~~--------~~~~~~~~~s~dg~l~~- 163 (349)
T 1jmx_B 95 YSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADG--LEAKPVRTFPM--------PRQVYLMRAADDGSLYV- 163 (349)
T ss_dssp SCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGG--GGBCCSEEEEC--------CSSCCCEEECTTSCEEE-
T ss_pred cceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCc--cccceeeeccC--------CCcccceeECCCCcEEE-
Confidence 234556689877776643 2345555 3321 00000000000 0011 223467999776
Q ss_pred EcCeeEEEeccCCeEEEee
Q 048017 250 ANRRSILFDYINNKLVKEF 268 (566)
Q Consensus 250 Gg~~~e~yDp~t~~W~~~~ 268 (566)
++....+||.++++....+
T Consensus 164 ~~~~i~~~d~~~~~~~~~~ 182 (349)
T 1jmx_B 164 AGPDIYKMDVKTGKYTVAL 182 (349)
T ss_dssp ESSSEEEECTTTCCEEEEE
T ss_pred ccCcEEEEeCCCCceeccc
Confidence 5556889999988765434
No 123
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=92.90 E-value=6.7 Score=37.41 Aligned_cols=132 Identities=14% Similarity=0.114 Sum_probs=67.7
Q ss_pred EEEEECCCCcEEeCcCC--CcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEe
Q 048017 111 SVLYDIASNTFRPLLLQ--TDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQIL 188 (566)
Q Consensus 111 ~~~yDp~t~~w~~l~~~--~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L 188 (566)
+.+||..+++....-.. +.....+....++|+.+++|+.+ ..+++||.. +.+-.. . +.......... -
T Consensus 47 V~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~D---g~v~iw~~~---~~~~~~--~-~~~h~~~~~~~-~ 116 (318)
T 4ggc_A 47 VYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS---AEVQLWDVQ---QQKRLR--N-MTSHSARVGSL-S 116 (318)
T ss_dssp EEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT---SEEEEEETT---TTEEEE--E-EECCSSCEEEE-E
T ss_pred EEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECC---CcEEEeecC---CceeEE--E-ecCccceEEEe-e
Confidence 66777777765543221 22222334566799999999864 578999987 443221 1 22111112222 2
Q ss_pred cCCcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEcC--eeEEEeccCCe
Q 048017 189 PDNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANR--RSILFDYINNK 263 (566)
Q Consensus 189 ~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~--~~e~yDp~t~~ 263 (566)
.++++++.|+.+.. ...+ .... ...... +.... .........++|+.++.|+. ...+||..+++
T Consensus 117 ~~~~~l~s~~~~~~-~~~~~~~~~---~~~~~~-~~~~~------~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 183 (318)
T 4ggc_A 117 WNSYILSSGSRSGH-IHHHDVRVA---EHHVAT-LSGHS------QEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGE 183 (318)
T ss_dssp EETTEEEEEETTSE-EEEEETTSS---SCEEEE-EECCS------SCEEEEEECTTSSEEEEEETTSCEEEEESSCBT
T ss_pred cCCCEEEEEecCCc-eEeeecCCC---ceeEEE-EcCcc------CceEEEEEcCCCCEEEEEecCcceeEEECCCCc
Confidence 36788888776542 2222 2111 111111 11110 01112334568888888775 36778887653
No 124
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=92.86 E-value=6.5 Score=37.17 Aligned_cols=131 Identities=11% Similarity=-0.046 Sum_probs=66.7
Q ss_pred EEEEECCCCcEEeCcCC-CcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccc-cccCcceEEEe
Q 048017 111 SVLYDIASNTFRPLLLQ-TDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLW-DRRWYASNQIL 188 (566)
Q Consensus 111 ~~~yDp~t~~w~~l~~~-~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~-~~R~y~s~~~L 188 (566)
+..||+. ++++..... ......+.++..+|+||+.... ...+.+||+. . +..... +. ....-.+.+.-
T Consensus 80 i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~i~~~d~~---g-~~~~~~--~~~~~~~~~~i~~~ 149 (299)
T 2z2n_A 80 IGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMN---GNRIGRITDD---G-KIREYE--LPNKGSYPSFITLG 149 (299)
T ss_dssp EEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETT---TTEEEEECTT---C-CEEEEE--CSSTTCCEEEEEEC
T ss_pred EEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecC---CceEEEECCC---C-CEEEec--CCCCCCCCceEEEc
Confidence 5667775 445443321 1112223344468999997543 2568889984 2 222221 11 11222344555
Q ss_pred cCCcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceEE-EecCCcEEEEE--cCeeEEEeccCCeE
Q 048017 189 PDNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFLH-LLPDGNLFIFA--NRRSILFDYINNKL 264 (566)
Q Consensus 189 ~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~-~l~~G~Ifv~G--g~~~e~yDp~t~~W 264 (566)
++|++|+..-. ...+.+| + +. ........ . ....|... .-++|+||+.. +....+||+ ++++
T Consensus 150 ~~g~l~v~~~~-~~~i~~~~~-~g---~~~~~~~~-~-------~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~ 215 (299)
T 2z2n_A 150 SDNALWFTENQ-NNAIGRITE-SG---DITEFKIP-T-------PASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEI 215 (299)
T ss_dssp TTSCEEEEETT-TTEEEEECT-TC---CEEEEECS-S-------TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCE
T ss_pred CCCCEEEEeCC-CCEEEEEcC-CC---cEEEeeCC-C-------CCCcceeEEECCCCCEEEEccCCceEEEECC-CCcE
Confidence 68999986532 2344455 4 32 22221111 0 01234333 34689999876 356788999 7766
Q ss_pred E
Q 048017 265 V 265 (566)
Q Consensus 265 ~ 265 (566)
.
T Consensus 216 ~ 216 (299)
T 2z2n_A 216 T 216 (299)
T ss_dssp E
T ss_pred E
Confidence 5
No 125
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=92.83 E-value=3.4 Score=40.54 Aligned_cols=111 Identities=10% Similarity=0.036 Sum_probs=57.6
Q ss_pred cCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEe-c--CCcEEEEcCccCCeEEEE-eCCCCC
Q 048017 138 LSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQIL-P--DNRIIVVGGRRVFTYEFY-PKIDSL 213 (566)
Q Consensus 138 l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L-~--dG~VyvvGG~~~~s~E~y-P~~~~~ 213 (566)
-+||+.+++|+.+ ..+++||.. +.+...... +..-...-..+.. + +|++++.|+.+. ++-+| ..+.
T Consensus 22 s~~g~~lasgs~D---~~v~lwd~~---~~~~~~~~~-l~gH~~~V~~v~~~~~~~~~~l~s~s~D~-~v~iWd~~~~-- 91 (316)
T 3bg1_A 22 DYYGTRLATCSSD---RSVKIFDVR---NGGQILIAD-LRGHEGPVWQVAWAHPMYGNILASCSYDR-KVIIWREENG-- 91 (316)
T ss_dssp CGGGCEEEEEETT---TEEEEEEEE---TTEEEEEEE-EECCSSCEEEEEECCGGGSSCEEEEETTS-CEEEECCSSS--
T ss_pred cCCCCEEEEEeCC---CeEEEEEec---CCCcEEEEE-EcCCCccEEEEEeCCCCCCCEEEEEECCC-EEEEEECCCC--
Confidence 3688999999864 679999986 443322222 3211111222333 2 478888888663 46667 4331
Q ss_pred CCeeeeccccccCCCCCCCCccceEEEecC--CcEEEEEcC--eeEEEeccCC-eEE
Q 048017 214 SSSLYLRFLIETRDPGEENNLYPFLHLLPD--GNLFIFANR--RSILFDYINN-KLV 265 (566)
Q Consensus 214 ~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~--G~Ifv~Gg~--~~e~yDp~t~-~W~ 265 (566)
.+.....+..... .. -.+...++ |++++.|+. ...+||..++ .|.
T Consensus 92 -~~~~~~~~~~h~~-----~V-~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~ 141 (316)
T 3bg1_A 92 -TWEKSHEHAGHDS-----SV-NSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWE 141 (316)
T ss_dssp -CCCEEEEECCCSS-----CC-CEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEE
T ss_pred -cceEEEEccCCCC-----ce-EEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcc
Confidence 2221111111100 00 12223455 788888875 3677888765 454
No 126
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=92.81 E-value=4.9 Score=43.35 Aligned_cols=79 Identities=11% Similarity=0.057 Sum_probs=48.1
Q ss_pred CceEEccCCC--ccceeEEEEeeCCeEEEEeccCCCCCCCCCCCCccccCCCCCCCcccceEEEEECCCCcEEeC-cCCC
Q 048017 52 GQWVLLQSSI--GISAMHMQVLNNDKVIIFDRTDMGPSNLSLPIDKCRKEGDVGQLDCTAHSVLYDIASNTFRPL-LLQT 128 (566)
Q Consensus 52 g~W~~l~~~~--~~~a~h~~~l~~gkV~~~gg~~~~~s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l-~~~~ 128 (566)
+.|+.+.... +...+|. +-+++++|+.+..+ ..+.+||..+++.... ....
T Consensus 126 ~s~~~~~~~~~~~~~~~~~-~~p~~~~~vs~~~d-------------------------~~V~v~D~~t~~~~~~i~~g~ 179 (543)
T 1nir_A 126 ESWKVLVKPEDRPKKQLND-LDLPNLFSVTLRDA-------------------------GQIALVDGDSKKIVKVIDTGY 179 (543)
T ss_dssp HHCEESSCGGGSCSSCCSC-CCGGGEEEEEEGGG-------------------------TEEEEEETTTCCEEEEEECST
T ss_pred hhhccccccccCCcccccc-cCCCCEEEEEEcCC-------------------------CeEEEEECCCceEEEEEecCc
Confidence 5676664311 2233444 33688888876532 2477899998876432 2111
Q ss_pred cccccCCeecCCCcEEEEcCCCCCCCeEEEEcC
Q 048017 129 DTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTP 161 (566)
Q Consensus 129 ~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP 161 (566)
. .++.++.+||+.+.+++.. ..+.+||.
T Consensus 180 ~--~~~v~~spdg~~l~v~~~d---~~V~v~D~ 207 (543)
T 1nir_A 180 A--VHISRMSASGRYLLVIGRD---ARIDMIDL 207 (543)
T ss_dssp T--EEEEEECTTSCEEEEEETT---SEEEEEET
T ss_pred c--cceEEECCCCCEEEEECCC---CeEEEEEC
Confidence 2 3345577899877777653 78999998
No 127
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=92.80 E-value=7.7 Score=38.97 Aligned_cols=138 Identities=10% Similarity=0.064 Sum_probs=72.0
Q ss_pred eEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCccccccc-CcceEEEe
Q 048017 110 HSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRR-WYASNQIL 188 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R-~y~s~~~L 188 (566)
.+.+||+++.+...... +.......++-+||++++.|+. ..+.+++.. +........ ..... .-.+++..
T Consensus 158 ~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~----~~~~~~~~~---~~~~~~~~~-~~~~~~~v~~v~fs 228 (365)
T 4h5i_A 158 IMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITG----SSLEVISTV---TGSCIARKT-DFDKNWSLSKINFI 228 (365)
T ss_dssp EEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECS----SCEEEEETT---TCCEEEEEC-CCCTTEEEEEEEEE
T ss_pred EEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccc----eeEEEEEec---cCcceeeee-cCCCCCCEEEEEEc
Confidence 47889999877543321 1112223456689999999874 346666655 333221111 11111 12234556
Q ss_pred cCCcEEEEcCccCC---eEEEE-eCCCCCCCeeee--ccccccCCCCCCCCccceEEEecCCcEEEEEcC--eeEEEecc
Q 048017 189 PDNRIIVVGGRRVF---TYEFY-PKIDSLSSSLYL--RFLIETRDPGEENNLYPFLHLLPDGNLFIFANR--RSILFDYI 260 (566)
Q Consensus 189 ~dG~VyvvGG~~~~---s~E~y-P~~~~~~~w~~~--p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~--~~e~yDp~ 260 (566)
+||+.++.++.+.. .+..| .... ..... ..+..... .- -.+...|||++++.|+. .+.+||.+
T Consensus 229 pdg~~l~~~s~d~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~~-----~V-~~~~~Spdg~~lasgs~D~~V~iwd~~ 299 (365)
T 4h5i_A 229 ADDTVLIAASLKKGKGIVLTKISIKSG---NTSVLRSKQVTNRFK-----GI-TSMDVDMKGELAVLASNDNSIALVKLK 299 (365)
T ss_dssp ETTEEEEEEEESSSCCEEEEEEEEETT---EEEEEEEEEEESSCS-----CE-EEEEECTTSCEEEEEETTSCEEEEETT
T ss_pred CCCCEEEEEecCCcceeEEeecccccc---eecceeeeeecCCCC-----Ce-EeEEECCCCCceEEEcCCCEEEEEECC
Confidence 79999998876542 22223 1110 11111 11111100 00 02234589999999985 47889999
Q ss_pred CCeEE
Q 048017 261 NNKLV 265 (566)
Q Consensus 261 t~~W~ 265 (566)
+.+-.
T Consensus 300 ~~~~~ 304 (365)
T 4h5i_A 300 DLSMS 304 (365)
T ss_dssp TTEEE
T ss_pred CCcEE
Confidence 88754
No 128
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=92.79 E-value=8.1 Score=38.07 Aligned_cols=149 Identities=12% Similarity=0.046 Sum_probs=77.1
Q ss_pred eEEEEECCCCcEEeCcCC-CcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCc-c-cccCccc-----ccccC
Q 048017 110 HSVLYDIASNTFRPLLLQ-TDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCD-W-VELSKNL-----WDRRW 181 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~-~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~-W-~~~~~~M-----~~~R~ 181 (566)
.+.+||+.+++....... .-....+.++-++|+||++... ...+..||+. ... . ..+.... ...-.
T Consensus 70 ~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~---~~~v~~~~~~---g~~~~~~~~~~~~~~g~~~~~~~ 143 (329)
T 3fvz_A 70 TILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVA---LHQVFKLDPH---SKEGPLLILGRSMQPGSDQNHFC 143 (329)
T ss_dssp CEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETT---TTEEEEECTT---CSSCCSEEESBTTBCCCSTTCCS
T ss_pred cEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECC---CCEEEEEeCC---CCeEEEEEecccCCCCCCccccC
Confidence 588999998886542211 1112223455678999998653 3679999987 331 1 1111000 01111
Q ss_pred cce-EEEec-CCcEEEEcCccCCeEEEEeCCCCCCCee-eeccccccCC-CCCCCCccceEEEe-cC-CcEEEEEc--Ce
Q 048017 182 YAS-NQILP-DNRIIVVGGRRVFTYEFYPKIDSLSSSL-YLRFLIETRD-PGEENNLYPFLHLL-PD-GNLFIFAN--RR 253 (566)
Q Consensus 182 y~s-~~~L~-dG~VyvvGG~~~~s~E~yP~~~~~~~w~-~~p~l~~~~d-~~~~~~~yp~~~~l-~~-G~Ifv~Gg--~~ 253 (566)
.+. .+.-+ +|++||..+.....+.+|.... ... ..... ...+ .....-.+|...++ ++ |+||+... ..
T Consensus 144 ~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g---~~~~~~~~~-g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~ 219 (329)
T 3fvz_A 144 QPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSG---KFVTQWGEE-SSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGR 219 (329)
T ss_dssp SEEEEEECTTTCCEEEEECSSCCEEEEECTTS---CEEEEECEE-CCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTE
T ss_pred CCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCC---CEEEEeccC-CCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCE
Confidence 343 44444 7999999863334555663221 111 11100 0000 00001124554444 66 89998853 46
Q ss_pred eEEEeccCCeEEEee
Q 048017 254 SILFDYINNKLVKEF 268 (566)
Q Consensus 254 ~e~yDp~t~~W~~~~ 268 (566)
..+||+.+++..+.+
T Consensus 220 I~~~~~~~G~~~~~~ 234 (329)
T 3fvz_A 220 IQCFKTDTKEFVREI 234 (329)
T ss_dssp EEEEETTTCCEEEEE
T ss_pred EEEEECCCCcEEEEE
Confidence 889999977766444
No 129
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=92.74 E-value=3.4 Score=39.48 Aligned_cols=132 Identities=12% Similarity=0.200 Sum_probs=66.6
Q ss_pred eEEEEECCCCcEEeCcCCCc-ccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcce-EEE
Q 048017 110 HSVLYDIASNTFRPLLLQTD-TWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYAS-NQI 187 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~~-~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s-~~~ 187 (566)
.+.+||+.......+..... ....+.++-++|++|++... ...+.+||+. ......... ...-..+. .+.
T Consensus 143 ~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~---~~~i~~~~~~---g~~~~~~~~--~g~~~~p~~i~~ 214 (286)
T 1q7f_A 143 RVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNR---AHCVKVFNYE---GQYLRQIGG--EGITNYPIGVGI 214 (286)
T ss_dssp EEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGG---GTEEEEEETT---CCEEEEESC--TTTSCSEEEEEE
T ss_pred EEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEEEEECC---CCEEEEEcCC---CCEEEEEcc--CCccCCCcEEEE
Confidence 46778876554444322111 11223445568999988643 3579999986 432222211 00012333 444
Q ss_pred ecCCcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceE-EEecCCcEEEEEc-CeeEEEecc
Q 048017 188 LPDNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFL-HLLPDGNLFIFAN-RRSILFDYI 260 (566)
Q Consensus 188 L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~-~~l~~G~Ifv~Gg-~~~e~yDp~ 260 (566)
-+||++||....++..+.+| +..+ .-..... .. ....|.. ...++|+||+... ....+|+..
T Consensus 215 d~~G~l~v~~~~~~~~i~~~~~~g~---~~~~~~~--~~------~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~ 279 (286)
T 1q7f_A 215 NSNGEILIADNHNNFNLTIFTQDGQ---LISALES--KV------KHAQCFDVALMDDGSVVLASKDYRLYIYRYV 279 (286)
T ss_dssp CTTCCEEEEECSSSCEEEEECTTSC---EEEEEEE--SS------CCSCEEEEEEETTTEEEEEETTTEEEEEECS
T ss_pred CCCCCEEEEeCCCCEEEEEECCCCC---EEEEEcc--cC------CCCcceeEEECCCCcEEEECCCCeEEEEEcc
Confidence 46899999876543366777 4321 1111111 00 0112433 3457999998753 235566553
No 130
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=92.68 E-value=10 Score=39.04 Aligned_cols=64 Identities=20% Similarity=0.238 Sum_probs=38.4
Q ss_pred cceeEEccCCeEEEEcCCCCCCCCCc---cccCc-------CCcEEeccCCCCCCcceeEEEEcCCCcEEEecCCCCcc
Q 048017 359 MSDMLLLPSGDVIIINGASNGTAGWE---DAEEP-------DRRFVVLNPSKIPRMYHSSAVVLPDGRILVGGSNPHRR 427 (566)
Q Consensus 359 ~~~~vvLpdG~V~vvGG~~~g~~~~~---~~ydP-------t~~Wt~~~~~~~~R~yhs~a~LlpdG~V~v~GG~~~~~ 427 (566)
.|.+++.-||+||..|-...|.-+.. +...| ..+...++ .-.+|+.| |..||+||.-|-+.++.
T Consensus 287 ~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~va----~G~~hs~a-lt~~G~v~~wG~n~~Gq 360 (406)
T 4d9s_A 287 RHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVS----CGWRHTLA-VTERNNVFAWGRGTNGQ 360 (406)
T ss_dssp SEEEEEETTSCEEEEECCTTSTTCSSSSSCEEEEEEECCGGGCCEEEEE----ECSSEEEE-EETTSCEEEEECCTTST
T ss_pred CEEEEEcCCCeEEEeeCCCCCCCCCCCCCCCccCEEEeccCCCcEEEEE----eCCCeEEE-EeCCCCEEEecCCCCCc
Confidence 46667778999999995544432221 12223 22333332 13467654 56899999999877653
No 131
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=92.51 E-value=4.1 Score=39.84 Aligned_cols=118 Identities=11% Similarity=0.046 Sum_probs=65.9
Q ss_pred cccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCc-ceEEEecCCcEEEEcCccCCeEEEE
Q 048017 129 DTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWY-ASNQILPDNRIIVVGGRRVFTYEFY 207 (566)
Q Consensus 129 ~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y-~s~~~L~dG~VyvvGG~~~~s~E~y 207 (566)
..|..+-... ||+||+..|.. +.++++.+|+. +.+=...-. +. ++.+ .+.+.. +++||++-..+ ..+-+|
T Consensus 42 ~~ftqGL~~~-~~~LyestG~~-g~S~v~~vD~~---Tgkv~~~~~-l~-~~~FgeGit~~-g~~ly~ltw~~-~~v~v~ 112 (262)
T 3nol_A 42 KAFTEGFFYR-NGYFYESTGLN-GRSSIRKVDIE---SGKTLQQIE-LG-KRYFGEGISDW-KDKIVGLTWKN-GLGFVW 112 (262)
T ss_dssp TCEEEEEEEE-TTEEEEEEEET-TEEEEEEECTT---TCCEEEEEE-CC-TTCCEEEEEEE-TTEEEEEESSS-SEEEEE
T ss_pred CcccceEEEE-CCEEEEECCCC-CCceEEEEECC---CCcEEEEEe-cC-CccceeEEEEe-CCEEEEEEeeC-CEEEEE
Confidence 4455555444 89999998853 55789999999 665433222 33 2322 234444 78999986543 345566
Q ss_pred -eCCCCCCCeeeeccccccCCCCCCCCccceEEEecCCc-EEEEEc-CeeEEEeccCCeEEEeec
Q 048017 208 -PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGN-LFIFAN-RRSILFDYINNKLVKEFP 269 (566)
Q Consensus 208 -P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~-Ifv~Gg-~~~e~yDp~t~~W~~~~p 269 (566)
+++. ..-...+.- .++.. +..||+ ||+.-| .....+||++.+..+.++
T Consensus 113 D~~t~--~~~~ti~~~-----------~eG~g-lt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~ 163 (262)
T 3nol_A 113 NIRNL--RQVRSFNYD-----------GEGWG-LTHNDQYLIMSDGTPVLRFLDPESLTPVRTIT 163 (262)
T ss_dssp ETTTC--CEEEEEECS-----------SCCCC-EEECSSCEEECCSSSEEEEECTTTCSEEEEEE
T ss_pred ECccC--cEEEEEECC-----------CCceE-EecCCCEEEEECCCCeEEEEcCCCCeEEEEEE
Confidence 5442 111122221 01112 234554 665543 346789999988765553
No 132
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=92.49 E-value=7.6 Score=37.06 Aligned_cols=107 Identities=16% Similarity=0.238 Sum_probs=56.5
Q ss_pred eeCCeEEEEeccCCCCCCCCCCCCccccCCCCCCCcccceEEEEECCCC--cEEeCcCC--CcccccCCeecC--CCcEE
Q 048017 71 LNNDKVIIFDRTDMGPSNLSLPIDKCRKEGDVGQLDCTAHSVLYDIASN--TFRPLLLQ--TDTWCSSGAVLS--DGTLV 144 (566)
Q Consensus 71 l~~gkV~~~gg~~~~~s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp~t~--~w~~l~~~--~~~~c~~~~~l~--dG~l~ 144 (566)
-++|+.++.|+.+ | .+.+||..++ .++.+... +.....+....+ |++++
T Consensus 20 ~~~~~~l~~~~~d----------g---------------~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l 74 (351)
T 3f3f_A 20 DFYGRHVATCSSD----------Q---------------HIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRII 74 (351)
T ss_dssp CSSSSEEEEEETT----------S---------------EEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEE
T ss_pred cCCCCEEEEeeCC----------C---------------eEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEE
Confidence 3688888887653 1 3667777644 33332211 111111223334 58999
Q ss_pred EEcCCCCCCCeEEEEcCCCCC----CCcccccCcccccccC-cceEEEecC--CcEEEEcCccCCeEEEE
Q 048017 145 QTGGYNVGDRVIRLFTPCNDE----GCDWVELSKNLWDRRW-YASNQILPD--NRIIVVGGRRVFTYEFY 207 (566)
Q Consensus 145 vvGG~~~g~~~v~~ydP~~~~----t~~W~~~~~~M~~~R~-y~s~~~L~d--G~VyvvGG~~~~s~E~y 207 (566)
++|+.+ ..+++||..... ...|..... +..... -.+.+..++ ++.++.|+.++ .+.+|
T Consensus 75 ~s~~~d---g~v~vwd~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg-~v~iw 139 (351)
T 3f3f_A 75 ASASYD---KTVKLWEEDPDQEECSGRRWNKLCT-LNDSKGSLYSVKFAPAHLGLKLACLGNDG-ILRLY 139 (351)
T ss_dssp EEEETT---SCEEEEEECTTSCTTSSCSEEEEEE-ECCCSSCEEEEEECCGGGCSEEEEEETTC-EEEEE
T ss_pred EEEcCC---CeEEEEecCCCcccccccCcceeee-ecccCCceeEEEEcCCCCCcEEEEecCCC-cEEEe
Confidence 998864 568888876210 112333322 222222 223445556 88888888653 45566
No 133
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=92.38 E-value=8.8 Score=37.50 Aligned_cols=63 Identities=16% Similarity=0.279 Sum_probs=38.7
Q ss_pred CeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccc-cCcceEEEecCCcEEEEcCccCCeEEEE
Q 048017 135 GAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDR-RWYASNQILPDNRIIVVGGRRVFTYEFY 207 (566)
Q Consensus 135 ~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~-R~y~s~~~L~dG~VyvvGG~~~~s~E~y 207 (566)
..+.+||+.+++|+.+ ..+++||.. +.+-. .. +... ..-.++..-++++.++.|+.+. ++.+|
T Consensus 71 ~~~s~dg~~l~s~s~D---~~v~~wd~~---~~~~~--~~-~~~h~~~v~~~~~~~~~~~l~s~s~D~-~i~vw 134 (319)
T 3frx_A 71 CTLTADGAYALSASWD---KTLRLWDVA---TGETY--QR-FVGHKSDVMSVDIDKKASMIISGSRDK-TIKVW 134 (319)
T ss_dssp EEECTTSSEEEEEETT---SEEEEEETT---TTEEE--EE-EECCSSCEEEEEECTTSCEEEEEETTS-CEEEE
T ss_pred EEECCCCCEEEEEeCC---CEEEEEECC---CCCee--EE-EccCCCcEEEEEEcCCCCEEEEEeCCC-eEEEE
Confidence 3456799999999864 689999987 44321 11 2211 1122344456888888888764 45555
No 134
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=92.25 E-value=9.5 Score=37.58 Aligned_cols=63 Identities=16% Similarity=0.246 Sum_probs=38.7
Q ss_pred CeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccc-cccCcceEEEecCCcEEEEcCccCCeEEEE
Q 048017 135 GAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLW-DRRWYASNQILPDNRIIVVGGRRVFTYEFY 207 (566)
Q Consensus 135 ~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~-~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y 207 (566)
.++.+++.+++.|+.+ ..+++||.. +.+... . +. ....-.+++.-+||+.++.||.++ .+.+|
T Consensus 82 ~~~~~~~~~l~s~s~D---~~v~lwd~~---~~~~~~--~-~~~h~~~v~~v~~sp~~~~l~s~~~d~-~i~~w 145 (343)
T 2xzm_R 82 LALSQENCFAISSSWD---KTLRLWDLR---TGTTYK--R-FVGHQSEVYSVAFSPDNRQILSAGAER-EIKLW 145 (343)
T ss_dssp EEECSSTTEEEEEETT---SEEEEEETT---SSCEEE--E-EECCCSCEEEEEECSSTTEEEEEETTS-CEEEE
T ss_pred EEECCCCCEEEEEcCC---CcEEEEECC---CCcEEE--E-EcCCCCcEEEEEECCCCCEEEEEcCCC-EEEEE
Confidence 3445789999998864 689999987 443221 1 22 112222445556899998888764 34444
No 135
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=92.22 E-value=8.9 Score=37.23 Aligned_cols=138 Identities=13% Similarity=0.094 Sum_probs=72.9
Q ss_pred eEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCccc--ccccCcc-eEE
Q 048017 110 HSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNL--WDRRWYA-SNQ 186 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M--~~~R~y~-s~~ 186 (566)
.+.+||+.+.+-...-........+.++.+||+.++++.. ...+.+||+. +.+-...-. . ..++.++ +.+
T Consensus 165 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~---~~~i~~~d~~---~~~~~~~~~-~~~~~~~~~~~~~~ 237 (353)
T 3vgz_A 165 VIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNA---DGELITIDTA---DNKILSRKK-LLDDGKEHFFINIS 237 (353)
T ss_dssp EEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECT---TSEEEEEETT---TTEEEEEEE-CCCSSSCCCEEEEE
T ss_pred eEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcC---CCeEEEEECC---CCeEEEEEE-cCCCCCCcccceEE
Confidence 4788999887754432212222344566678886555543 2578899987 433221111 1 1122233 345
Q ss_pred EecCCcEEEEcCccCCeEEEE-eCCCCCCCee-eeccccccCCCCCCCCccceEEEecCCc-EEEEEc--CeeEEEeccC
Q 048017 187 ILPDNRIIVVGGRRVFTYEFY-PKIDSLSSSL-YLRFLIETRDPGEENNLYPFLHLLPDGN-LFIFAN--RRSILFDYIN 261 (566)
Q Consensus 187 ~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~-~~p~l~~~~d~~~~~~~yp~~~~l~~G~-Ifv~Gg--~~~e~yDp~t 261 (566)
.-+||+.+.++......+.+| +.+. ... ..+.- . . ......++|+ +|+... ....+||..+
T Consensus 238 ~s~dg~~l~~~~~~~~~v~~~d~~~~---~~~~~~~~~-~--------~--~~~~~s~dg~~l~v~~~~~~~v~~~d~~~ 303 (353)
T 3vgz_A 238 LDTARQRAFITDSKAAEVLVVDTRNG---NILAKVAAP-E--------S--LAVLFNPARNEAYVTHRQAGKVSVIDAKS 303 (353)
T ss_dssp EETTTTEEEEEESSSSEEEEEETTTC---CEEEEEECS-S--------C--CCEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred ECCCCCEEEEEeCCCCEEEEEECCCC---cEEEEEEcC-C--------C--ceEEECCCCCEEEEEECCCCeEEEEECCC
Confidence 556787444444443455666 4432 211 12211 0 0 1234567887 776653 4678899999
Q ss_pred CeEEEee
Q 048017 262 NKLVKEF 268 (566)
Q Consensus 262 ~~W~~~~ 268 (566)
++....+
T Consensus 304 ~~~~~~~ 310 (353)
T 3vgz_A 304 YKVVKTF 310 (353)
T ss_dssp TEEEEEE
T ss_pred CeEEEEE
Confidence 8876444
No 136
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=92.22 E-value=6.7 Score=39.26 Aligned_cols=135 Identities=15% Similarity=0.186 Sum_probs=68.4
Q ss_pred eEEEEECCCCcEEeCc----CCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCccccc-ccCcce
Q 048017 110 HSVLYDIASNTFRPLL----LQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWD-RRWYAS 184 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~----~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~-~R~y~s 184 (566)
.+.+||..+++-.... ..+.....+.++.+||+.+++|+.+ ..+++||.. +.+- +.. +.. ...-.+
T Consensus 104 ~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d---~~i~iwd~~---~~~~--~~~-~~~h~~~V~~ 174 (344)
T 4gqb_B 104 AVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKD---ICIKVWDLA---QQVV--LSS-YRAHAAQVTC 174 (344)
T ss_dssp EEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETT---SCEEEEETT---TTEE--EEE-ECCCSSCEEE
T ss_pred EEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCC---CeEEEEECC---CCcE--EEE-EcCcCCceEE
Confidence 3778998877532211 1122222334566899999999864 579999987 4332 111 221 122223
Q ss_pred EEEecCC-cEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceE-EEec-CCcEEEEEcC--eeEEEe
Q 048017 185 NQILPDN-RIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFL-HLLP-DGNLFIFANR--RSILFD 258 (566)
Q Consensus 185 ~~~L~dG-~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~-~~l~-~G~Ifv~Gg~--~~e~yD 258 (566)
.+.-+++ .+++.|+.++ ++.+| ..+. ......... .. ...... ...+ ++++++.|+. .+.+||
T Consensus 175 ~~~~~~~~~~l~s~s~D~-~v~iwd~~~~--~~~~~~~~~-~~-------~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd 243 (344)
T 4gqb_B 175 VAASPHKDSVFLSCSEDN-RILLWDTRCP--KPASQIGCS-AP-------GYLPTSLAWHPQQSEVFVFGDENGTVSLVD 243 (344)
T ss_dssp EEECSSCTTEEEEEETTS-CEEEEETTSS--SCEEECC------------CCCEEEEEECSSCTTEEEEEETTSEEEEEE
T ss_pred EEecCCCCCceeeecccc-cccccccccc--ceeeeeecc-ee-------eccceeeeecCCCCcceEEeccCCcEEEEE
Confidence 3344566 5777777653 45666 3321 011111100 00 001111 2233 6788888875 467899
Q ss_pred ccCCeE
Q 048017 259 YINNKL 264 (566)
Q Consensus 259 p~t~~W 264 (566)
.++++-
T Consensus 244 ~~~~~~ 249 (344)
T 4gqb_B 244 TKSTSC 249 (344)
T ss_dssp SCC--C
T ss_pred CCCCcE
Confidence 987653
No 137
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=91.96 E-value=5.4 Score=41.06 Aligned_cols=137 Identities=9% Similarity=0.059 Sum_probs=75.4
Q ss_pred eEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEec
Q 048017 110 HSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILP 189 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~ 189 (566)
.+.+||..+++.+.+..... .....+..+||+.+++.+..++...++++|.. +.+...+.. ......+.+.-+
T Consensus 204 ~i~~~d~~tg~~~~l~~~~~-~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~---~~~~~~l~~---~~~~~~~~~~sp 276 (415)
T 2hqs_A 204 ALVIQTLANGAVRQVASFPR-HNGAPAFSPDGSKLAFALSKTGSLNLYVMDLA---SGQIRQVTD---GRSNNTEPTWFP 276 (415)
T ss_dssp EEEEEETTTCCEEEEECCSS-CEEEEEECTTSSEEEEEECTTSSCEEEEEETT---TCCEEECCC---CSSCEEEEEECT
T ss_pred EEEEEECCCCcEEEeecCCC-cccCEEEcCCCCEEEEEEecCCCceEEEEECC---CCCEEeCcC---CCCcccceEECC
Confidence 47899999998876543322 22345566899866644433456789999988 555544332 112222344456
Q ss_pred CCcEEEEcCccCC--eEEEEeCCCCCCCeeeeccccccCCCCCCCCccc-eEEEecCCcEEEEEcC-----eeEEEeccC
Q 048017 190 DNRIIVVGGRRVF--TYEFYPKIDSLSSSLYLRFLIETRDPGEENNLYP-FLHLLPDGNLFIFANR-----RSILFDYIN 261 (566)
Q Consensus 190 dG~VyvvGG~~~~--s~E~yP~~~~~~~w~~~p~l~~~~d~~~~~~~yp-~~~~l~~G~Ifv~Gg~-----~~e~yDp~t 261 (566)
||+.++++..... .+..+.... . ....... . ..+. .....+||+.++++.. ...++|..+
T Consensus 277 dg~~l~~~s~~~g~~~i~~~d~~~-~-~~~~l~~---~-------~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~ 344 (415)
T 2hqs_A 277 DSQNLAFTSDQAGRPQVYKVNING-G-APQRITW---E-------GSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLAT 344 (415)
T ss_dssp TSSEEEEEECTTSSCEEEEEETTS-S-CCEECCC---S-------SSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTT
T ss_pred CCCEEEEEECCCCCcEEEEEECCC-C-CEEEEec---C-------CCcccCeEECCCCCEEEEEECcCCceEEEEEECCC
Confidence 9986666554322 333332221 0 1111110 0 0111 2334589997776653 467889998
Q ss_pred CeEE
Q 048017 262 NKLV 265 (566)
Q Consensus 262 ~~W~ 265 (566)
++..
T Consensus 345 ~~~~ 348 (415)
T 2hqs_A 345 GGVQ 348 (415)
T ss_dssp CCEE
T ss_pred CCEE
Confidence 8765
No 138
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=91.64 E-value=5 Score=39.63 Aligned_cols=138 Identities=11% Similarity=0.073 Sum_probs=74.6
Q ss_pred EEEEECCCCcEEeCcC-CCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCccccc--ccCcceEEE
Q 048017 111 SVLYDIASNTFRPLLL-QTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWD--RRWYASNQI 187 (566)
Q Consensus 111 ~~~yDp~t~~w~~l~~-~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~--~R~y~s~~~ 187 (566)
+.+||..+++...... .....+...+..+||.++++|+.+ ..+++||.. +.+-.. .. +.. ...-.+.+.
T Consensus 151 i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~d---g~i~iwd~~---~~~~~~-~~-~~~~h~~~v~~l~f 222 (343)
T 3lrv_A 151 IGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPD---GILDVYNLS---SPDQAS-SR-FPVDEEAKIKEVKF 222 (343)
T ss_dssp EEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTT---SCEEEEESS---CTTSCC-EE-CCCCTTSCEEEEEE
T ss_pred EEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCC---CEEEEEECC---CCCCCc-cE-EeccCCCCEEEEEE
Confidence 6789998887644322 222223445666899999999864 579999987 433210 11 222 222233444
Q ss_pred ecCCcEEEEcCccCCeEEEE-eCCCCCCCeeeecccc-ccCCCCCCCCccceEEEecCCcEEEE--E-cCeeEEEec--c
Q 048017 188 LPDNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLI-ETRDPGEENNLYPFLHLLPDGNLFIF--A-NRRSILFDY--I 260 (566)
Q Consensus 188 L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~-~~~d~~~~~~~yp~~~~l~~G~Ifv~--G-g~~~e~yDp--~ 260 (566)
-+||+.++.|+ ++ .+.+| ..+. ........+. .... ... ..+...++|+.++. + +....+|+. .
T Consensus 223 s~~g~~l~s~~-~~-~v~iwd~~~~--~~~~~~~~~~~~~~~----~~~-~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 223 ADNGYWMVVEC-DQ-TVVCFDLRKD--VGTLAYPTYTIPEFK----TGT-VTYDIDDSGKNMIAYSNESNSLTIYKFDKK 293 (343)
T ss_dssp CTTSSEEEEEE-SS-BEEEEETTSS--TTCBSSCCCBC---------CC-EEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred eCCCCEEEEEe-CC-eEEEEEcCCC--Ccceeeccccccccc----ccc-eEEEECCCCCEEEEecCCCCcEEEEEEccc
Confidence 56899999888 43 67777 3321 0111111000 0000 000 12344578998888 4 445667766 4
Q ss_pred CCeEE
Q 048017 261 NNKLV 265 (566)
Q Consensus 261 t~~W~ 265 (566)
...|.
T Consensus 294 ~~~~~ 298 (343)
T 3lrv_A 294 TKNWT 298 (343)
T ss_dssp TCSEE
T ss_pred ccceE
Confidence 45686
No 139
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=91.64 E-value=13 Score=37.99 Aligned_cols=133 Identities=13% Similarity=0.074 Sum_probs=68.2
Q ss_pred eEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEec
Q 048017 110 HSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILP 189 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~ 189 (566)
.+.+||..+++....-..+.. ....+..++..+++|+.+ ..+.+||.. +.+-......+......-.+...
T Consensus 194 ~i~vwd~~~~~~~~~~~~h~~--~v~~l~~~~~~l~s~s~d---g~i~vwd~~---~~~~~~~~~~~~~~~~~v~~~~~- 264 (435)
T 1p22_A 194 TVRVWDVNTGEMLNTLIHHCE--AVLHLRFNNGMMVTCSKD---RSIAVWDMA---SPTDITLRRVLVGHRAAVNVVDF- 264 (435)
T ss_dssp CEEEEESSSCCEEEEECCCCS--CEEEEECCTTEEEEEETT---SCEEEEECS---SSSCCEEEEEECCCSSCEEEEEE-
T ss_pred eEEEEECCCCcEEEEEcCCCC--cEEEEEEcCCEEEEeeCC---CcEEEEeCC---CCCCceeeeEecCCCCcEEEEEe-
Confidence 377888888765332111111 111222356778888754 578899987 33211110102222222233444
Q ss_pred CCcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEcC--eeEEEeccCCeEE
Q 048017 190 DNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANR--RSILFDYINNKLV 265 (566)
Q Consensus 190 dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~--~~e~yDp~t~~W~ 265 (566)
+|+.+++|+.++ .+.+| ..+. .. ... +... ..+...+..++++++.|+. ...+||..+++-.
T Consensus 265 ~~~~l~s~~~dg-~i~vwd~~~~---~~-~~~-~~~~--------~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~ 329 (435)
T 1p22_A 265 DDKYIVSASGDR-TIKVWNTSTC---EF-VRT-LNGH--------KRGIACLQYRDRLVVSGSSDNTIRLWDIECGACL 329 (435)
T ss_dssp ETTEEEEEETTS-EEEEEETTTC---CE-EEE-EECC--------SSCEEEEEEETTEEEEEETTSCEEEEETTTCCEE
T ss_pred CCCEEEEEeCCC-eEEEEECCcC---cE-EEE-EcCC--------CCcEEEEEeCCCEEEEEeCCCeEEEEECCCCCEE
Confidence 788888887653 45566 3321 11 111 1111 1122334457888888874 4678999887654
No 140
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=91.56 E-value=10 Score=36.57 Aligned_cols=87 Identities=7% Similarity=-0.049 Sum_probs=47.1
Q ss_pred EEEEECCCCc----EEeCcCCCcccccCCeecCCCc-EEEEcCCCCCCCeEEEEcC-CCCCCCcccccCcccccccCcce
Q 048017 111 SVLYDIASNT----FRPLLLQTDTWCSSGAVLSDGT-LVQTGGYNVGDRVIRLFTP-CNDEGCDWVELSKNLWDRRWYAS 184 (566)
Q Consensus 111 ~~~yDp~t~~----w~~l~~~~~~~c~~~~~l~dG~-l~vvGG~~~g~~~v~~ydP-~~~~t~~W~~~~~~M~~~R~y~s 184 (566)
+.+||..+++ ...+. .+..........++|+ .+++|+.+ ..+.+||. . +.+...+.. ......-.+
T Consensus 35 v~iw~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d---g~i~~wd~~~---~~~~~~~~~-~~~~~~v~~ 106 (342)
T 1yfq_A 35 LTVYKFDIQAKNVDLLQSL-RYKHPLLCCNFIDNTDLQIYVGTVQ---GEILKVDLIG---SPSFQALTN-NEANLGICR 106 (342)
T ss_dssp EEEEEEETTTTEEEEEEEE-ECSSCEEEEEEEESSSEEEEEEETT---SCEEEECSSS---SSSEEECBS-CCCCSCEEE
T ss_pred EEEEEeCCCCccccceeee-ecCCceEEEEECCCCCcEEEEEcCC---CeEEEEEecc---CCceEeccc-cCCCCceEE
Confidence 6678777665 33222 1122222334556899 88888854 57899998 7 444332221 001222223
Q ss_pred EEEecCCcEEEEcCccCCeEEEE
Q 048017 185 NQILPDNRIIVVGGRRVFTYEFY 207 (566)
Q Consensus 185 ~~~L~dG~VyvvGG~~~~s~E~y 207 (566)
.+..+ ++.++.|+.++ .+.+|
T Consensus 107 l~~~~-~~~l~s~~~d~-~i~iw 127 (342)
T 1yfq_A 107 ICKYG-DDKLIAASWDG-LIEVI 127 (342)
T ss_dssp EEEET-TTEEEEEETTS-EEEEE
T ss_pred EEeCC-CCEEEEEcCCC-eEEEE
Confidence 44445 78888887653 45555
No 141
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=91.42 E-value=8.3 Score=37.36 Aligned_cols=113 Identities=11% Similarity=0.118 Sum_probs=54.9
Q ss_pred ecCCC-cEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEecC---CcEEEEcCccCCeEEEE-eCCC
Q 048017 137 VLSDG-TLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILPD---NRIIVVGGRRVFTYEFY-PKID 211 (566)
Q Consensus 137 ~l~dG-~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~d---G~VyvvGG~~~~s~E~y-P~~~ 211 (566)
..++| +++++|+...+...+++||.. +.+...... ......-.+++..++ |+.++.|+.++ .+.+| ..+.
T Consensus 26 ~~p~~~~l~~~~s~~~~d~~v~iw~~~---~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg-~i~iwd~~~~ 100 (357)
T 3i2n_A 26 WVPCSAKFVTMGNFARGTGVIQLYEIQ---HGDLKLLRE-IEKAKPIKCGTFGATSLQQRYLATGDFGG-NLHIWNLEAP 100 (357)
T ss_dssp ECTTSSEEEEEEC--CCCEEEEEEEEC---SSSEEEEEE-EEESSCEEEEECTTCCTTTCCEEEEETTS-CEEEECTTSC
T ss_pred EcCCCceEEEecCccCCCcEEEEEeCC---CCcccceee-ecccCcEEEEEEcCCCCCCceEEEecCCC-eEEEEeCCCC
Confidence 34566 566777653234679999987 555433222 222222223333445 68888887654 45566 3221
Q ss_pred CCCCeeeeccccccCCCCCCCCccceEE-----EecCCcEEEEEcC--eeEEEeccCCe
Q 048017 212 SLSSSLYLRFLIETRDPGEENNLYPFLH-----LLPDGNLFIFANR--RSILFDYINNK 263 (566)
Q Consensus 212 ~~~~w~~~p~l~~~~d~~~~~~~yp~~~-----~l~~G~Ifv~Gg~--~~e~yDp~t~~ 263 (566)
. ....... .... ......+ ..++|++++.|+. ...+||..+++
T Consensus 101 ~-~~~~~~~---~~~~-----~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~ 150 (357)
T 3i2n_A 101 E-MPVYSVK---GHKE-----IINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKD 150 (357)
T ss_dssp S-SCSEEEC---CCSS-----CEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCS
T ss_pred C-ccEEEEE---eccc-----ceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCC
Confidence 0 0011111 0000 0000001 1368888888875 46788988764
No 142
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=91.10 E-value=23 Score=39.61 Aligned_cols=248 Identities=8% Similarity=-0.027 Sum_probs=118.5
Q ss_pred EEEEECCCCcEEeCcCC---CcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcc-cccccCcceEE
Q 048017 111 SVLYDIASNTFRPLLLQ---TDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKN-LWDRRWYASNQ 186 (566)
Q Consensus 111 ~~~yDp~t~~w~~l~~~---~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~-M~~~R~y~s~~ 186 (566)
..+||+.+++++..... ......+...-.+|+|++ |... ..+.+||+. +.+++..... +.. ..-.+.+
T Consensus 385 l~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~---~Gl~~~~~~---~~~~~~~~~~~~~~-~~v~~i~ 456 (781)
T 3v9f_A 385 INVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYL---GNISYYNTR---LKKFQIIELEKNEL-LDVRVFY 456 (781)
T ss_dssp EEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETT---EEEEEECSS---SCEEEECCSTTTCC-CCEEEEE
T ss_pred EEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-Eecc---CCEEEEcCC---CCcEEEeccCCCCC-CeEEEEE
Confidence 56677777766654211 111111112224677777 3221 357889998 7777665421 111 1122333
Q ss_pred EecCCcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccce-EEEecCCcEEEEEc-CeeEEEeccCCe
Q 048017 187 ILPDNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPF-LHLLPDGNLFIFAN-RRSILFDYINNK 263 (566)
Q Consensus 187 ~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~-~~~l~~G~Ifv~Gg-~~~e~yDp~t~~ 263 (566)
.-.+|++++... ..+-+| +.+. .+......... . . ...+.. ...-.+|+|++... ....+||+++++
T Consensus 457 ~d~~g~lwigt~---~Gl~~~~~~~~---~~~~~~~~~~~-~--~-~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~ 526 (781)
T 3v9f_A 457 EDKNKKIWIGTH---AGVFVIDLASK---KVIHHYDTSNS-Q--L-LENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQL 526 (781)
T ss_dssp ECTTSEEEEEET---TEEEEEESSSS---SCCEEECTTTS-S--C-SCSCEEEEEECTTCCEEEEESSSCEEEECTTCCE
T ss_pred ECCCCCEEEEEC---CceEEEeCCCC---eEEecccCccc-c--c-ccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCe
Confidence 344688887432 234455 5543 33222111000 0 0 011122 22345788887653 567889999998
Q ss_pred EEEeecccCCCCCCccCCCCceeeecccccCCCCCCCCCCCCCCEEEEEcCCCCCccccccccccccccCCeeEEEEeeC
Q 048017 264 LVKEFPVIPGNDKRNYPSTGSSILLPVKLSAGSDGNGTAALPDAEVMVCGGAPAGAFIKSDKESVYVEASRTCGRLKVTD 343 (566)
Q Consensus 264 W~~~~p~lp~~~~r~~~~~g~avllpl~~~~~~~~~~y~~~~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d~~~ 343 (566)
+. .+.. +.+ .+..-...++. .. +|+|++... . +- +.+||+.
T Consensus 527 ~~-~~~~-~~~----l~~~~i~~i~~-----------d~---~g~lWi~T~-~-Gl----------------v~~~d~~- 567 (781)
T 3v9f_A 527 VR-KFNQ-YEG----FCSNTINQIYR-----------SS---KGQMWLATG-E-GL----------------VCFPSAR- 567 (781)
T ss_dssp EE-EECT-TTT----CSCSCEEEEEE-----------CT---TSCEEEEET-T-EE----------------EEESCTT-
T ss_pred EE-EccC-CCC----CCCCeeEEEEE-----------CC---CCCEEEEEC-C-Cc----------------eEEECCC-
Confidence 87 3431 111 11001111211 01 677777532 1 11 0233332
Q ss_pred CCCCeEE---e-ccCCCcccceeEEccCCeEEEEcCCCCCCCCCccccCc-CCcEEeccC---CCCCCcceeEEEEcCCC
Q 048017 344 KYPVWSM---E-FMPMPRVMSDMLLLPSGDVIIINGASNGTAGWEDAEEP-DRRFVVLNP---SKIPRMYHSSAVVLPDG 415 (566)
Q Consensus 344 ~~~~W~~---~-~M~~~R~~~~~vvLpdG~V~vvGG~~~g~~~~~~~ydP-t~~Wt~~~~---~~~~R~yhs~a~LlpdG 415 (566)
+.+++. . .|+.... .+.+.-.+|+|++.+. . | ..+||| +.+++.... ++.......+++..+||
T Consensus 568 -~~~~~~~~~~~gl~~~~i-~~i~~d~~g~lW~~t~-~-G----l~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G 639 (781)
T 3v9f_A 568 -NFDYQVFQRKEGLPNTHI-RAISEDKNGNIWASTN-T-G----ISCYITSKKCFYTYDHSNNIPQGSFISGCVTKDHNG 639 (781)
T ss_dssp -TCCCEEECGGGTCSCCCC-CEEEECSSSCEEEECS-S-C----EEEEETTTTEEEEECGGGTCCSSCEEEEEEEECTTS
T ss_pred -CCcEEEccccCCCCCceE-EEEEECCCCCEEEEcC-C-c----eEEEECCCCceEEecccCCccccccccCceEECCCC
Confidence 123332 1 3444333 2434556799888642 2 3 346889 777776432 33333333456677899
Q ss_pred cEEEecCC
Q 048017 416 RILVGGSN 423 (566)
Q Consensus 416 ~V~v~GG~ 423 (566)
++|++|.+
T Consensus 640 ~l~~g~~~ 647 (781)
T 3v9f_A 640 LIYFGSIN 647 (781)
T ss_dssp CEEEEETT
T ss_pred EEEEECCC
Confidence 99987764
No 143
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=90.75 E-value=16 Score=37.16 Aligned_cols=87 Identities=13% Similarity=0.176 Sum_probs=47.8
Q ss_pred eEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCccccc-ccCcceEEEe
Q 048017 110 HSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWD-RRWYASNQIL 188 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~-~R~y~s~~~L 188 (566)
.+.+||..+++-......+...+ ..+..++.+++.|+.+ ..+.++|.. .... .+.. +.. ...-......
T Consensus 170 ~v~iWd~~~~~~~~~~~~h~~~v--~~~s~~~~~l~sgs~d---~~i~~~d~~---~~~~-~~~~-~~~h~~~~~~~~~~ 239 (420)
T 4gga_A 170 EVQLWDVQQQKRLRNMTSHSARV--GSLSWNSYILSSGSRS---GHIHHHDVR---VAEH-HVAT-LSGHSQEVCGLRWA 239 (420)
T ss_dssp CEEEEETTTTEEEEEECCCSSCE--EEEEEETTEEEEEETT---SEEEEEETT---SSSC-EEEE-EECCSSCEEEEEEC
T ss_pred eEEEEEcCCCcEEEEEeCCCCce--EEEeeCCCEEEEEeCC---CceeEeeec---ccce-eeEE-ecccccceeeeeec
Confidence 47888888876533222222221 2344588999998864 567788876 2221 1111 211 1122234455
Q ss_pred cCCcEEEEcCccCCeEEEE
Q 048017 189 PDNRIIVVGGRRVFTYEFY 207 (566)
Q Consensus 189 ~dG~VyvvGG~~~~s~E~y 207 (566)
++|+.++.|+.++ .+.+|
T Consensus 240 ~~g~~l~s~~~D~-~v~i~ 257 (420)
T 4gga_A 240 PDGRHLASGGNDN-LVNVW 257 (420)
T ss_dssp TTSSEEEEEETTS-CEEEE
T ss_pred CCCCeeeeeeccc-cceEE
Confidence 6889888888764 34455
No 144
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=90.62 E-value=5.7 Score=38.63 Aligned_cols=83 Identities=16% Similarity=0.091 Sum_probs=48.5
Q ss_pred eEEEEECCC-CcEEeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEe
Q 048017 110 HSVLYDIAS-NTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQIL 188 (566)
Q Consensus 110 ~~~~yDp~t-~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L 188 (566)
.+.+||..+ .+....-..+..........++|+.+++|+.+ ..+.+||.. +.+.. .. +.........+..
T Consensus 198 ~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~v~d~~---~~~~~--~~-~~~~~~~~~~~~~ 268 (369)
T 3zwl_B 198 KISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRD---TNSFLVDVS---TLQVL--KK-YETDCPLNTAVIT 268 (369)
T ss_dssp EEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETT---SEEEEEETT---TCCEE--EE-EECSSCEEEEEEC
T ss_pred EEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCC---ceEEEEECC---CCcee--ee-ecCCCCceeEEec
Confidence 367899887 33222111122222233455789999998754 578999987 43322 11 2333334455666
Q ss_pred cCCcEEEEcCccC
Q 048017 189 PDNRIIVVGGRRV 201 (566)
Q Consensus 189 ~dG~VyvvGG~~~ 201 (566)
++|+.+++|+.+.
T Consensus 269 ~~~~~l~~~~~~~ 281 (369)
T 3zwl_B 269 PLKEFIILGGGQE 281 (369)
T ss_dssp SSSSEEEEEECCC
T ss_pred CCCceEEEeecCC
Confidence 7899999888654
No 145
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=90.61 E-value=9.6 Score=37.23 Aligned_cols=117 Identities=15% Similarity=0.076 Sum_probs=64.3
Q ss_pred cCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEecCCcEEEEcCccCCeEEEE-eCCC
Q 048017 133 SSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILPDNRIIVVGGRRVFTYEFY-PKID 211 (566)
Q Consensus 133 ~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~ 211 (566)
++-.+..||+||+..|. .+.+++..+|+. +++=...-+ +. .+...-..++.++++|+..-. ...+.+| +.+.
T Consensus 24 ~Gl~~~~dg~Lyvstg~-~~~s~v~~iD~~---tg~v~~~i~-l~-~~~fgeGi~~~g~~lyv~t~~-~~~v~viD~~t~ 96 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGL-YGRSSVRQVALQ---TGKVENIHK-MD-DSYFGEGLTLLNEKLYQVVWL-KNIGFIYDRRTL 96 (266)
T ss_dssp EEEEECSTTEEEEEECS-TTTCEEEEEETT---TCCEEEEEE-CC-TTCCEEEEEEETTEEEEEETT-CSEEEEEETTTT
T ss_pred ccEEEeCCCeEEEECCC-CCCCEEEEEECC---CCCEEEEEe-cC-CCcceEEEEEeCCEEEEEEec-CCEEEEEECCCC
Confidence 34445556999998774 245789999998 655332211 22 232322344446799988643 3455666 5432
Q ss_pred CCCCeeeeccccccCCCCCCCCccceEEEecCC-cEEEEEc-CeeEEEeccCCeEEEeec
Q 048017 212 SLSSSLYLRFLIETRDPGEENNLYPFLHLLPDG-NLFIFAN-RRSILFDYINNKLVKEFP 269 (566)
Q Consensus 212 ~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G-~Ifv~Gg-~~~e~yDp~t~~W~~~~p 269 (566)
..-...+.- . -.+. .+.+|| ++|+.-| +....+|+++.+..+.++
T Consensus 97 --~v~~~i~~g-~---------~~g~-glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~ 143 (266)
T 2iwa_A 97 --SNIKNFTHQ-M---------KDGW-GLATDGKILYGSDGTSILYEIDPHTFKLIKKHN 143 (266)
T ss_dssp --EEEEEEECC-S---------SSCC-EEEECSSSEEEECSSSEEEEECTTTCCEEEEEE
T ss_pred --cEEEEEECC-C---------CCeE-EEEECCCEEEEECCCCeEEEEECCCCcEEEEEE
Confidence 011122221 0 0111 244565 4776543 457789999988765553
No 146
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=90.56 E-value=14 Score=36.49 Aligned_cols=112 Identities=9% Similarity=-0.066 Sum_probs=59.3
Q ss_pred CeecCCC-cEEEEcCCCCCCCeEEEEcCCCCCCCcccccCccc-ccccCcceEEEec-CCcEEEEcCccCCeEEEE-eCC
Q 048017 135 GAVLSDG-TLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNL-WDRRWYASNQILP-DNRIIVVGGRRVFTYEFY-PKI 210 (566)
Q Consensus 135 ~~~l~dG-~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M-~~~R~y~s~~~L~-dG~VyvvGG~~~~s~E~y-P~~ 210 (566)
....++| +++++|+.+ ..+++||.. +.+....-. + .....-.+++..+ +++.++.|+.+ ..+.+| ...
T Consensus 79 ~~~~~~~~~~l~s~~~d---g~i~iwd~~---~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~l~s~~~d-~~i~iwd~~~ 150 (383)
T 3ei3_B 79 LEWHPTHPTTVAVGSKG---GDIILWDYD---VQNKTSFIQ-GMGPGDAITGMKFNQFNTNQLFVSSIR-GATTLRDFSG 150 (383)
T ss_dssp EEECSSCTTEEEEEEBT---SCEEEEETT---STTCEEEEC-CCSTTCBEEEEEEETTEEEEEEEEETT-TEEEEEETTS
T ss_pred EEECCCCCCEEEEEcCC---CeEEEEeCC---Ccccceeee-cCCcCCceeEEEeCCCCCCEEEEEeCC-CEEEEEECCC
Confidence 3455677 899998864 578999987 554433211 1 1122222344445 56788887765 345566 221
Q ss_pred CCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEcC--eeEEEeccCCe
Q 048017 211 DSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANR--RSILFDYINNK 263 (566)
Q Consensus 211 ~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~--~~e~yDp~t~~ 263 (566)
. ........... ...--.+...++|++++.|+. ...+||.....
T Consensus 151 ~---~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 196 (383)
T 3ei3_B 151 S---VIQVFAKTDSW------DYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHE 196 (383)
T ss_dssp C---EEEEEECCCCS------SCCEEEEEEETTTTEEEEEETTSEEEEEETTSCE
T ss_pred C---ceEEEeccCCC------CCCeEEEEECCCCCEEEEECCCCCEEEEECCCCE
Confidence 1 11111110000 001112334578999988875 46788985443
No 147
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=90.39 E-value=9.2 Score=38.19 Aligned_cols=137 Identities=12% Similarity=0.043 Sum_probs=66.9
Q ss_pred eEEEEECCCCcEEeCcCCCcccccCCeecCCC-cEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcc-eEEE
Q 048017 110 HSVLYDIASNTFRPLLLQTDTWCSSGAVLSDG-TLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYA-SNQI 187 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG-~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~-s~~~ 187 (566)
.+.+||..+++-...-..+...-....+.+++ .+++.|+.+ ..+++||.. +.+-...-. ........ +++.
T Consensus 150 ~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D---~~v~iwd~~---~~~~~~~~~-~~~~~~~~~~~~~ 222 (344)
T 4gqb_B 150 CIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSED---NRILLWDTR---CPKPASQIG-CSAPGYLPTSLAW 222 (344)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETT---SCEEEEETT---SSSCEEECC-----CCCEEEEEE
T ss_pred eEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccc---ccccccccc---ccceeeeee-cceeeccceeeee
Confidence 37789998876543222222111123344566 588888764 578999987 433221100 11111112 2333
Q ss_pred ec-CCcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceEEEecCC-cEEEEEcC--eeEEEeccCC
Q 048017 188 LP-DNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDG-NLFIFANR--RSILFDYINN 262 (566)
Q Consensus 188 L~-dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G-~Ifv~Gg~--~~e~yDp~t~ 262 (566)
.+ ++++++.|+.+ ..+.+| .++. ..-..+ ....+ .--.+...++| ++++.|+. ...+||..++
T Consensus 223 ~p~~~~~l~sg~~d-g~v~~wd~~~~--~~~~~~---~~h~~------~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~ 290 (344)
T 4gqb_B 223 HPQQSEVFVFGDEN-GTVSLVDTKST--SCVLSS---AVHSQ------CVTGLVFSPHSVPFLASLSEDCSLAVLDSSLS 290 (344)
T ss_dssp CSSCTTEEEEEETT-SEEEEEESCC----CCEEE---ECCSS------CEEEEEECSSSSCCEEEEETTSCEEEECTTCC
T ss_pred cCCCCcceEEeccC-CcEEEEECCCC--cEEEEE---cCCCC------CEEEEEEccCCCeEEEEEeCCCeEEEEECCCC
Confidence 33 56788888765 356666 3321 011111 11100 00122234677 56667764 4678999887
Q ss_pred eEE
Q 048017 263 KLV 265 (566)
Q Consensus 263 ~W~ 265 (566)
+-.
T Consensus 291 ~~~ 293 (344)
T 4gqb_B 291 ELF 293 (344)
T ss_dssp EEE
T ss_pred cEE
Confidence 654
No 148
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=89.70 E-value=14 Score=36.26 Aligned_cols=158 Identities=7% Similarity=-0.066 Sum_probs=82.3
Q ss_pred eEEEEeeCCeEEEEeccCCCCCCCCCCCCccccCCCCCCCcccceEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEE
Q 048017 66 MHMQVLNNDKVIIFDRTDMGPSNLSLPIDKCRKEGDVGQLDCTAHSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQ 145 (566)
Q Consensus 66 ~h~~~l~~gkV~~~gg~~~~~s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v 145 (566)
.++..+.++++|+-.|.. ..+..+|++|++-..--.....|.. +..+.+++||+
T Consensus 57 tqGL~~~~~~Ly~stG~~-------------------------g~v~~iD~~Tgkv~~~~l~~~~Fge-Git~~g~~Ly~ 110 (268)
T 3nok_A 57 TQGLVFHQGHFFESTGHQ-------------------------GTLRQLSLESAQPVWMERLGNIFAE-GLASDGERLYQ 110 (268)
T ss_dssp EEEEEEETTEEEEEETTT-------------------------TEEEECCSSCSSCSEEEECTTCCEE-EEEECSSCEEE
T ss_pred cceEEEECCEEEEEcCCC-------------------------CEEEEEECCCCcEEeEECCCCccee-EEEEeCCEEEE
Confidence 355565677777776632 1267889998876432222233433 34555789999
Q ss_pred EcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEecCCcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccc
Q 048017 146 TGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILPDNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIE 224 (566)
Q Consensus 146 vGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~ 224 (566)
+... .+.+.+||+. +.+- +.. .+.+-..-+.+.- ++++|+.-|. ..+.++ |.+. ......+.-..
T Consensus 111 ltw~---~~~v~V~D~~---Tl~~--~~t-i~~~~eGwGLt~D-g~~L~vSdGs--~~l~~iDp~T~--~v~~~I~V~~~ 176 (268)
T 3nok_A 111 LTWT---EGLLFTWSGM---PPQR--ERT-TRYSGEGWGLCYW-NGKLVRSDGG--TMLTFHEPDGF--ALVGAVQVKLR 176 (268)
T ss_dssp EESS---SCEEEEEETT---TTEE--EEE-EECSSCCCCEEEE-TTEEEEECSS--SEEEEECTTTC--CEEEEEECEET
T ss_pred EEcc---CCEEEEEECC---cCcE--EEE-EeCCCceeEEecC-CCEEEEECCC--CEEEEEcCCCC--eEEEEEEeCCC
Confidence 8543 3678999998 4332 222 2222211233322 4567776653 344455 6652 11111111000
Q ss_pred cCCCCCCCCccceEEEecCCcEEEEE--cCeeEEEeccCCeEEEee
Q 048017 225 TRDPGEENNLYPFLHLLPDGNLFIFA--NRRSILFDYINNKLVKEF 268 (566)
Q Consensus 225 ~~d~~~~~~~yp~~~~l~~G~Ifv~G--g~~~e~yDp~t~~W~~~~ 268 (566)
. ..-.+.--....+|+||+-- .+...+.||++++....+
T Consensus 177 --g---~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp~TG~V~~~I 217 (268)
T 3nok_A 177 --G---QPVELINELECANGVIYANIWHSSDVLEIDPATGTVVGVI 217 (268)
T ss_dssp --T---EECCCEEEEEEETTEEEEEETTCSEEEEECTTTCBEEEEE
T ss_pred --C---cccccccccEEeCCEEEEEECCCCeEEEEeCCCCcEEEEE
Confidence 0 00001111223499999654 346778999999876544
No 149
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=89.69 E-value=22 Score=37.36 Aligned_cols=69 Identities=4% Similarity=-0.053 Sum_probs=41.5
Q ss_pred ccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCc--ccccCccccccc-C-cceEEEec--CCcEEEEcCccCCe
Q 048017 130 TWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCD--WVELSKNLWDRR-W-YASNQILP--DNRIIVVGGRRVFT 203 (566)
Q Consensus 130 ~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~--W~~~~~~M~~~R-~-y~s~~~L~--dG~VyvvGG~~~~s 203 (566)
....+.+.-+||+.+++|+. ..+.+||.. +.. ...... +.... . -.+++.-+ ||+.++.|+.++ .
T Consensus 19 ~~v~~~~~spdg~~l~~~~~----~~v~v~~~~---~~~~~~~~~~~-~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg-~ 89 (615)
T 1pgu_A 19 NFTTHLSYDPTTNAIAYPCG----KSAFVRCLD---DGDSKVPPVVQ-FTGHGSSVVTTVKFSPIKGSQYLCSGDESG-K 89 (615)
T ss_dssp TCCCCCEEETTTTEEEEEET----TEEEEEECC---SSCCSSCSEEE-ECTTTTSCEEEEEECSSTTCCEEEEEETTS-E
T ss_pred CceeEEEECCCCCEEEEecC----CeEEEEECC---CCCCccccceE-EecCCCceEEEEEECcCCCCCEEEEecCCC-E
Confidence 33445667789999999872 479999987 330 011111 32222 2 23455567 899999988753 4
Q ss_pred EEEE
Q 048017 204 YEFY 207 (566)
Q Consensus 204 ~E~y 207 (566)
+.+|
T Consensus 90 v~vw 93 (615)
T 1pgu_A 90 VIVW 93 (615)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5555
No 150
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=89.67 E-value=6.7 Score=40.21 Aligned_cols=132 Identities=12% Similarity=0.123 Sum_probs=75.4
Q ss_pred EEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEecC
Q 048017 111 SVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILPD 190 (566)
Q Consensus 111 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~d 190 (566)
+.+||..+.+-...-..+..........++|+.+++|+.+ ..+++||.. +.+ .+.. +............ +
T Consensus 292 i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~d---g~i~vwd~~---~~~--~~~~-~~~h~~~v~~~~~-~ 361 (464)
T 3v7d_B 292 LIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMD---TTIRIWDLE---NGE--LMYT-LQGHTALVGLLRL-S 361 (464)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETT---SCEEEEETT---TTE--EEEE-ECCCSSCEEEEEE-C
T ss_pred EEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCC---CcEEEEECC---CCc--EEEE-EeCCCCcEEEEEE-c
Confidence 6788988776443222222233334556789999998864 569999987 433 2222 3322323344455 6
Q ss_pred CcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEcC-eeEEEeccCCeEE
Q 048017 191 NRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANR-RSILFDYINNKLV 265 (566)
Q Consensus 191 G~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~-~~e~yDp~t~~W~ 265 (566)
++.++.|+.++ .+.+| ..+. .. ....... .........++|++++.|+. ...+||.++++-.
T Consensus 362 ~~~l~s~s~dg-~v~vwd~~~~---~~-~~~~~~~--------~~~~~~~~~~~~~~l~~~~dg~i~iwd~~~g~~~ 425 (464)
T 3v7d_B 362 DKFLVSAAADG-SIRGWDANDY---SR-KFSYHHT--------NLSAITTFYVSDNILVSGSENQFNIYNLRSGKLV 425 (464)
T ss_dssp SSEEEEEETTS-EEEEEETTTC---CE-EEEEECT--------TCCCEEEEEECSSEEEEEETTEEEEEETTTCCEE
T ss_pred CCEEEEEeCCC-cEEEEECCCC---ce-eeeecCC--------CCccEEEEEeCCCEEEEecCCeEEEEECCCCcEE
Confidence 78888887653 46667 3321 11 1111000 11223445678998888764 5788999998755
No 151
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=89.57 E-value=16 Score=35.58 Aligned_cols=174 Identities=10% Similarity=-0.032 Sum_probs=92.2
Q ss_pred CceEEccC--CCccceeEEEEeeCCeEEEEeccCCCCCCCCCCCCccccCCCCCCCcccceEEEEECCCCcEEeCcCC-C
Q 048017 52 GQWVLLQS--SIGISAMHMQVLNNDKVIIFDRTDMGPSNLSLPIDKCRKEGDVGQLDCTAHSVLYDIASNTFRPLLLQ-T 128 (566)
Q Consensus 52 g~W~~l~~--~~~~~a~h~~~l~~gkV~~~gg~~~~~s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~-~ 128 (566)
-.++.+.. ..+....+...+.++++|+-.|.. +. ..+..+|++|++-..--.+ .
T Consensus 29 ~~~~vv~~~phd~~~ftqGL~~~~~~LyestG~~-g~----------------------S~v~~vD~~Tgkv~~~~~l~~ 85 (262)
T 3nol_A 29 YDYQIVHSYPHDTKAFTEGFFYRNGYFYESTGLN-GR----------------------SSIRKVDIESGKTLQQIELGK 85 (262)
T ss_dssp EEEEEEEEEECCTTCEEEEEEEETTEEEEEEEET-TE----------------------EEEEEECTTTCCEEEEEECCT
T ss_pred cceEEEEEecCCCCcccceEEEECCEEEEECCCC-CC----------------------ceEEEEECCCCcEEEEEecCC
Confidence 35666542 233344466666788888877753 11 2478899999987543333 3
Q ss_pred cccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEecCCcEEEEcCccCCeEEEE-
Q 048017 129 DTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILPDNRIIVVGGRRVFTYEFY- 207 (566)
Q Consensus 129 ~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y- 207 (566)
..|.. +..+.+++||++-.. .+.+.+||+. +.+- +.. .+.+--..+.+ -.++++|+.-|+ ..+.++
T Consensus 86 ~~Fge-Git~~g~~ly~ltw~---~~~v~v~D~~---t~~~--~~t-i~~~~eG~glt-~dg~~L~~SdGs--~~i~~iD 152 (262)
T 3nol_A 86 RYFGE-GISDWKDKIVGLTWK---NGLGFVWNIR---NLRQ--VRS-FNYDGEGWGLT-HNDQYLIMSDGT--PVLRFLD 152 (262)
T ss_dssp TCCEE-EEEEETTEEEEEESS---SSEEEEEETT---TCCE--EEE-EECSSCCCCEE-ECSSCEEECCSS--SEEEEEC
T ss_pred cccee-EEEEeCCEEEEEEee---CCEEEEEECc---cCcE--EEE-EECCCCceEEe-cCCCEEEEECCC--CeEEEEc
Confidence 33433 344557899998543 3688999998 4332 222 33222112233 223456665553 334455
Q ss_pred eCCCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEE--cCeeEEEeccCCeEEEee
Q 048017 208 PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFA--NRRSILFDYINNKLVKEF 268 (566)
Q Consensus 208 P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~G--g~~~e~yDp~t~~W~~~~ 268 (566)
|.+. ......+.-..-.. -.++--....+|+||+-- .+...+.||++++....+
T Consensus 153 p~T~--~v~~~I~V~~~g~~-----~~~lNELe~~~G~lyan~w~~~~I~vIDp~tG~V~~~I 208 (262)
T 3nol_A 153 PESL--TPVRTITVTAHGEE-----LPELNELEWVDGEIFANVWQTNKIVRIDPETGKVTGII 208 (262)
T ss_dssp TTTC--SEEEEEECEETTEE-----CCCEEEEEEETTEEEEEETTSSEEEEECTTTCBEEEEE
T ss_pred CCCC--eEEEEEEeccCCcc-----ccccceeEEECCEEEEEEccCCeEEEEECCCCcEEEEE
Confidence 6652 11111111000000 001111223489999654 346778999999887544
No 152
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=89.39 E-value=20 Score=36.57 Aligned_cols=136 Identities=13% Similarity=0.045 Sum_probs=76.1
Q ss_pred eEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEec
Q 048017 110 HSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILP 189 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~ 189 (566)
.+.+||..+++.+.+.... .........+||+.+++++..++...++++|.. +.+-..+.. ...+..+.+.-+
T Consensus 248 ~i~~~d~~~~~~~~l~~~~-~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~---~~~~~~l~~---~~~~~~~~~~sp 320 (415)
T 2hqs_A 248 NLYVMDLASGQIRQVTDGR-SNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNIN---GGAPQRITW---EGSQNQDADVSS 320 (415)
T ss_dssp EEEEEETTTCCEEECCCCS-SCEEEEEECTTSSEEEEEECTTSSCEEEEEETT---SSCCEECCC---SSSEEEEEEECT
T ss_pred eEEEEECCCCCEEeCcCCC-CcccceEECCCCCEEEEEECCCCCcEEEEEECC---CCCEEEEec---CCCcccCeEECC
Confidence 4778999998887765432 122334566899977776654456688888987 544333221 122223344457
Q ss_pred CCcEEEEcCccCC--eEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEcC-----eeEEEeccC
Q 048017 190 DNRIIVVGGRRVF--TYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANR-----RSILFDYIN 261 (566)
Q Consensus 190 dG~VyvvGG~~~~--s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~-----~~e~yDp~t 261 (566)
||+.+++++.+.. .+.+| ..+. ....+ ... ...-.....+||+.+++++. ...++|..+
T Consensus 321 dG~~l~~~~~~~g~~~i~~~d~~~~---~~~~l---~~~-------~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g 387 (415)
T 2hqs_A 321 DGKFMVMVSSNGGQQHIAKQDLATG---GVQVL---SST-------FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDG 387 (415)
T ss_dssp TSSEEEEEEECSSCEEEEEEETTTC---CEEEC---CCS-------SSCEEEEECTTSSEEEEEEEETTEEEEEEEETTS
T ss_pred CCCEEEEEECcCCceEEEEEECCCC---CEEEe---cCC-------CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCC
Confidence 9998887776532 34444 3321 22211 110 01112334689997777653 356778776
Q ss_pred CeEE
Q 048017 262 NKLV 265 (566)
Q Consensus 262 ~~W~ 265 (566)
+...
T Consensus 388 ~~~~ 391 (415)
T 2hqs_A 388 RFKA 391 (415)
T ss_dssp CCEE
T ss_pred CcEE
Confidence 6544
No 153
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=88.77 E-value=18 Score=35.18 Aligned_cols=161 Identities=7% Similarity=-0.063 Sum_probs=85.6
Q ss_pred EEEEe-eCCeEEEEeccCCCCCCCCCCCCccccCCCCCCCcccceEEEEECCCCcEEeCcC-CCcccccCCeecCCCcEE
Q 048017 67 HMQVL-NNDKVIIFDRTDMGPSNLSLPIDKCRKEGDVGQLDCTAHSVLYDIASNTFRPLLL-QTDTWCSSGAVLSDGTLV 144 (566)
Q Consensus 67 h~~~l-~~gkV~~~gg~~~~~s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~-~~~~~c~~~~~l~dG~l~ 144 (566)
|...+ ++|++|+-.|.. +. ..+..+|++|++-..--. ....|.. +..+.+++||
T Consensus 24 ~Gl~~~~dg~Lyvstg~~-~~----------------------s~v~~iD~~tg~v~~~i~l~~~~fge-Gi~~~g~~ly 79 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLY-GR----------------------SSVRQVALQTGKVENIHKMDDSYFGE-GLTLLNEKLY 79 (266)
T ss_dssp EEEEECSTTEEEEEECST-TT----------------------CEEEEEETTTCCEEEEEECCTTCCEE-EEEEETTEEE
T ss_pred ccEEEeCCCeEEEECCCC-CC----------------------CEEEEEECCCCCEEEEEecCCCcceE-EEEEeCCEEE
Confidence 55554 458999876632 11 247899999998765322 2233433 3444467888
Q ss_pred EEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEecCCcEEEEcCccCCeEEEE-eCCCCCCCeeeecccc
Q 048017 145 QTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILPDNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLI 223 (566)
Q Consensus 145 vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~ 223 (566)
+..- ..+.+.+||+. +.+ .+.. ++.+.-.....+-.++++|+.-|. ..+.++ |.+. ......+.-.
T Consensus 80 v~t~---~~~~v~viD~~---t~~--v~~~-i~~g~~~g~glt~Dg~~l~vs~gs--~~l~viD~~t~--~v~~~I~Vg~ 146 (266)
T 2iwa_A 80 QVVW---LKNIGFIYDRR---TLS--NIKN-FTHQMKDGWGLATDGKILYGSDGT--SILYEIDPHTF--KLIKKHNVKY 146 (266)
T ss_dssp EEET---TCSEEEEEETT---TTE--EEEE-EECCSSSCCEEEECSSSEEEECSS--SEEEEECTTTC--CEEEEEECEE
T ss_pred EEEe---cCCEEEEEECC---CCc--EEEE-EECCCCCeEEEEECCCEEEEECCC--CeEEEEECCCC--cEEEEEEECC
Confidence 8853 24678999987 432 2222 322200111223324578887653 344445 6542 1111222110
Q ss_pred ccCCCCCCCCccceEEEecCCcEEEEE--cCeeEEEeccCCeEEEeec
Q 048017 224 ETRDPGEENNLYPFLHLLPDGNLFIFA--NRRSILFDYINNKLVKEFP 269 (566)
Q Consensus 224 ~~~d~~~~~~~yp~~~~l~~G~Ifv~G--g~~~e~yDp~t~~W~~~~p 269 (566)
. . ..-.+|......+|+||+-- .+...+.|+++++....++
T Consensus 147 ~--~---~p~~~~nele~~dg~lyvn~~~~~~V~vID~~tg~V~~~I~ 189 (266)
T 2iwa_A 147 N--G---HRVIRLNELEYINGEVWANIWQTDCIARISAKDGTLLGWIL 189 (266)
T ss_dssp T--T---EECCCEEEEEEETTEEEEEETTSSEEEEEETTTCCEEEEEE
T ss_pred C--C---cccccceeEEEECCEEEEecCCCCeEEEEECCCCcEEEEEE
Confidence 0 0 00012333334489999764 3567889999998765553
No 154
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=88.52 E-value=23 Score=36.04 Aligned_cols=133 Identities=14% Similarity=0.174 Sum_probs=67.8
Q ss_pred eEEEEECCCCcEEeCcCC--CcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCccccc-ccCcceEE
Q 048017 110 HSVLYDIASNTFRPLLLQ--TDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWD-RRWYASNQ 186 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~--~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~-~R~y~s~~ 186 (566)
.+.+||.+++..+.+... ....+.+..+.++|+++++|+.+ ..+.+||.. ...- .. +.. ...-.+++
T Consensus 188 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d---g~i~~wd~~---~~~~---~~-~~~h~~~v~~v~ 257 (435)
T 4e54_B 188 TTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNV---GNVILLNMD---GKEL---WN-LRMHKKKVTHVA 257 (435)
T ss_dssp CEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSS---SBEEEEESS---SCBC---CC-SBCCSSCEEEEE
T ss_pred EEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCC---CcEeeeccC---ccee---EE-EecccceEEeee
Confidence 367888888766554332 12222334456799999999864 578899976 3221 11 221 11112233
Q ss_pred EecCCc-EEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceE--EEecCCcEEEEEcCe--eEEEecc
Q 048017 187 ILPDNR-IIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFL--HLLPDGNLFIFANRR--SILFDYI 260 (566)
Q Consensus 187 ~L~dG~-VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~--~~l~~G~Ifv~Gg~~--~e~yDp~ 260 (566)
.-++++ +++.|+.+ ..+.+| ..+. ......-..... ..+.. ...++|+.++.|+.+ ..+||..
T Consensus 258 ~~p~~~~~~~s~s~d-~~v~iwd~~~~--~~~~~~~~~~~h--------~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~ 326 (435)
T 4e54_B 258 LNPCCDWFLATASVD-QTVKIWDLRQV--RGKASFLYSLPH--------RHPVNAACFSPDGARLLTTDQKSEIRVYSAS 326 (435)
T ss_dssp ECTTCSSEEEEEETT-SBCCEEETTTC--CSSSCCSBCCBC--------SSCEEECCBCTTSSEEEEEESSSCEEEEESS
T ss_pred ecCCCceEEEEecCc-ceeeEEecccc--cccceEEEeeec--------cccccceeECCCCCeeEEEcCCCEEEEEECC
Confidence 334665 66666654 344455 2221 000000000000 01111 123689988888754 6778887
Q ss_pred CCe
Q 048017 261 NNK 263 (566)
Q Consensus 261 t~~ 263 (566)
+..
T Consensus 327 ~~~ 329 (435)
T 4e54_B 327 QWD 329 (435)
T ss_dssp SSS
T ss_pred CCc
Confidence 754
No 155
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=88.51 E-value=18 Score=34.75 Aligned_cols=48 Identities=13% Similarity=0.189 Sum_probs=29.8
Q ss_pred EEEEEC-CCCcEEeCcCC-CcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCC
Q 048017 111 SVLYDI-ASNTFRPLLLQ-TDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPC 162 (566)
Q Consensus 111 ~~~yDp-~t~~w~~l~~~-~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~ 162 (566)
+.+||. .+++...+... +..........+ +.++++|+.+ ..+++||..
T Consensus 81 i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d---~~i~iwd~~ 130 (342)
T 1yfq_A 81 ILKVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWD---GLIEVIDPR 130 (342)
T ss_dssp EEEECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETT---SEEEEECHH
T ss_pred EEEEEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCC---CeEEEEccc
Confidence 678998 88877665541 111111223344 7888888754 578899875
No 156
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=88.42 E-value=32 Score=37.56 Aligned_cols=104 Identities=14% Similarity=0.037 Sum_probs=61.0
Q ss_pred eEEEEeeCCeEEEEeccCCCCCCCCCCCCccccCCCCCCCcccceEEEEECCCCcEEeCcCCCc----------------
Q 048017 66 MHMQVLNNDKVIIFDRTDMGPSNLSLPIDKCRKEGDVGQLDCTAHSVLYDIASNTFRPLLLQTD---------------- 129 (566)
Q Consensus 66 ~h~~~l~~gkV~~~gg~~~~~s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~---------------- 129 (566)
.+.+.-+||+.+++++...+.. ....+.+||..+++.+.+.....
T Consensus 40 ~~~~~SpdG~~la~~~~~d~~~-------------------~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (741)
T 2ecf_A 40 MKPKVAPDGSRVTFLRGKDSDR-------------------NQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARR 100 (741)
T ss_dssp EEEEECTTSSEEEEEECCSSCT-------------------TEEEEEEEETTTCCEEEEECGGGTC--------------
T ss_pred CCceEecCCCEEEEEeccCCCC-------------------cccEEEEEECCCCceeEccchhhcccccccccchhhhhh
Confidence 3455667999887776411110 01357889999988776543211
Q ss_pred --------ccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCC---cccccCcccccccCcceEEEecCCcEEEEcC
Q 048017 130 --------TWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGC---DWVELSKNLWDRRWYASNQILPDNRIIVVGG 198 (566)
Q Consensus 130 --------~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~---~W~~~~~~M~~~R~y~s~~~L~dG~VyvvGG 198 (566)
......+.-+||+.++++.. ..++++|.. +. .-..+.. ....-...+.-+||+.++.+.
T Consensus 101 ~~~~~~~~~~v~~~~~SpDg~~l~~~~~----~~i~~~d~~---~~~~~~~~~l~~---~~~~~~~~~~SPDG~~la~~~ 170 (741)
T 2ecf_A 101 ERQRIAAMTGIVDYQWSPDAQRLLFPLG----GELYLYDLK---QEGKAAVRQLTH---GEGFATDAKLSPKGGFVSFIR 170 (741)
T ss_dssp ------CCEESCCCEECTTSSEEEEEET----TEEEEEESS---SCSTTSCCBCCC---SSSCEEEEEECTTSSEEEEEE
T ss_pred hhhhhccccCcceeEECCCCCEEEEEeC----CcEEEEECC---CCCcceEEEccc---CCcccccccCCCCCCEEEEEe
Confidence 11234567789998887764 679999987 54 3333322 122223344556898666654
No 157
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=88.30 E-value=18 Score=34.49 Aligned_cols=137 Identities=9% Similarity=0.001 Sum_probs=74.4
Q ss_pred eEEEEECCCCcEEeCcCC----CcccccCCeecCCCcEEEE----cCCC----------CCCCeEEEEcCCCCCCCcccc
Q 048017 110 HSVLYDIASNTFRPLLLQ----TDTWCSSGAVLSDGTLVQT----GGYN----------VGDRVIRLFTPCNDEGCDWVE 171 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~----~~~~c~~~~~l~dG~l~vv----GG~~----------~g~~~v~~ydP~~~~t~~W~~ 171 (566)
.+.+||+++++.+.+... ...+....++-++|++|++ |... .+...+..||+. .+...
T Consensus 91 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~----g~~~~ 166 (296)
T 3e5z_A 91 RLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD----GTLSA 166 (296)
T ss_dssp EEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT----SCEEE
T ss_pred eEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC----CCEEE
Confidence 367899988888765321 1112334566679999997 4310 123478888885 22222
Q ss_pred cCcccccccCcceEEEecCCcEEEEcCccCCeEEEE-eCCCCCCCe-eeeccccccCCCCCCCCccce-EEEecCCcEEE
Q 048017 172 LSKNLWDRRWYASNQILPDNRIIVVGGRRVFTYEFY-PKIDSLSSS-LYLRFLIETRDPGEENNLYPF-LHLLPDGNLFI 248 (566)
Q Consensus 172 ~~~~M~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w-~~~p~l~~~~d~~~~~~~yp~-~~~l~~G~Ifv 248 (566)
....+.. -.+.+.-+||+++ +.......+.+| ...+ ... .....+ ... ..+|. +..-++|+||+
T Consensus 167 ~~~~~~~---~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~--g~~~~~~~~~-~~~------~~~p~~i~~d~~G~l~v 233 (296)
T 3e5z_A 167 PIRDRVK---PNGLAFLPSGNLL-VSDTGDNATHRYCLNAR--GETEYQGVHF-TVE------PGKTDGLRVDAGGLIWA 233 (296)
T ss_dssp EECCCSS---EEEEEECTTSCEE-EEETTTTEEEEEEECSS--SCEEEEEEEE-CCS------SSCCCSEEEBTTSCEEE
T ss_pred eecCCCC---CccEEECCCCCEE-EEeCCCCeEEEEEECCC--CcCcCCCeEe-eCC------CCCCCeEEECCCCCEEE
Confidence 2111221 2244555689988 544444456666 3311 122 111111 100 11232 34457999999
Q ss_pred EEcCeeEEEeccCCe
Q 048017 249 FANRRSILFDYINNK 263 (566)
Q Consensus 249 ~Gg~~~e~yDp~t~~ 263 (566)
..+....+||+....
T Consensus 234 ~~~~~v~~~~~~g~~ 248 (296)
T 3e5z_A 234 SAGDGVHVLTPDGDE 248 (296)
T ss_dssp EETTEEEEECTTSCE
T ss_pred EcCCeEEEECCCCCE
Confidence 887778999998544
No 158
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=88.29 E-value=19 Score=34.79 Aligned_cols=112 Identities=11% Similarity=-0.086 Sum_probs=60.0
Q ss_pred CeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEecCCcEEEEcCcc---CCeEEEE-eCC
Q 048017 135 GAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILPDNRIIVVGGRR---VFTYEFY-PKI 210 (566)
Q Consensus 135 ~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyvvGG~~---~~s~E~y-P~~ 210 (566)
.+.-.+|+||+++... ..+.+||+. +.++..... .....-.+.+.-+||++|+....+ ...+-+| +..
T Consensus 50 ~~~~~~g~l~~~~~~~---~~i~~~d~~---~~~~~~~~~--~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~ 121 (333)
T 2dg1_A 50 LNFDRQGQLFLLDVFE---GNIFKINPE---TKEIKRPFV--SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENG 121 (333)
T ss_dssp EEECTTSCEEEEETTT---CEEEEECTT---TCCEEEEEE--CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTS
T ss_pred cEECCCCCEEEEECCC---CEEEEEeCC---CCcEEEEee--CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCC
Confidence 3445789999887542 578999998 666554321 111212233444689999875432 1234455 443
Q ss_pred CCCCCee-eeccccccCCCCCCCCccce-EEEecCCcEEEEEc--------CeeEEEeccCCeEE
Q 048017 211 DSLSSSL-YLRFLIETRDPGEENNLYPF-LHLLPDGNLFIFAN--------RRSILFDYINNKLV 265 (566)
Q Consensus 211 ~~~~~w~-~~p~l~~~~d~~~~~~~yp~-~~~l~~G~Ifv~Gg--------~~~e~yDp~t~~W~ 265 (566)
. ... ...... ....+. ....++|++|+... ....+||+++++..
T Consensus 122 ~---~~~~~~~~~~--------~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~ 175 (333)
T 2dg1_A 122 D---NLQDIIEDLS--------TAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVT 175 (333)
T ss_dssp C---SCEEEECSSS--------SCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEE
T ss_pred C---EEEEEEccCc--------cCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEE
Confidence 2 111 111000 011232 33457899998654 24677888776654
No 159
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=88.08 E-value=21 Score=36.57 Aligned_cols=90 Identities=7% Similarity=-0.164 Sum_probs=49.2
Q ss_pred EEEEECCCCcEEeC-cCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCc------cc-------
Q 048017 111 SVLYDIASNTFRPL-LLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSK------NL------- 176 (566)
Q Consensus 111 ~~~yDp~t~~w~~l-~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~------~M------- 176 (566)
+.+||..+.+.... ...+.......++. ||+++++|+.+ ..+.+||.. +.+....-. .+
T Consensus 222 i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d---~~v~vwd~~---~~~~~~~~~~~~~~~~~~~~~~~~ 294 (450)
T 2vdu_B 222 IKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGD---DKIFAWDWK---TGKNLSTFDYNSLIKPYLNDQHLA 294 (450)
T ss_dssp EEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESS---SEEEEEETT---TCCEEEEEECHHHHGGGCCTTSBC
T ss_pred EEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCC---CeEEEEECC---CCcEeeeecchhhhhhhhhhcccc
Confidence 67788777654322 11122222223344 89999999854 578899987 443211100 00
Q ss_pred ----------ccccCcceEEEecCCcEEEEcCccCCeEEEE
Q 048017 177 ----------WDRRWYASNQILPDNRIIVVGGRRVFTYEFY 207 (566)
Q Consensus 177 ----------~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y 207 (566)
.....-...+..+||+.+++++.....+.+|
T Consensus 295 ~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw 335 (450)
T 2vdu_B 295 PPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIIL 335 (450)
T ss_dssp ----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEE
T ss_pred cccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEE
Confidence 0112223445567888888887555566777
No 160
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=87.96 E-value=18 Score=34.02 Aligned_cols=132 Identities=13% Similarity=-0.034 Sum_probs=67.3
Q ss_pred EEEEECCCCcEEeCcCC-CcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCccccc-ccCcceEEEe
Q 048017 111 SVLYDIASNTFRPLLLQ-TDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWD-RRWYASNQIL 188 (566)
Q Consensus 111 ~~~yDp~t~~w~~l~~~-~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~-~R~y~s~~~L 188 (566)
+..||+. ++++..... ......+.++..+|++|+.... ...+..||+. .+..... +.. ...-.+.+.-
T Consensus 85 v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~i~~~~~~----g~~~~~~--~~~~~~~~~~i~~d 154 (300)
T 2qc5_A 85 IGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLN---GDRIGKLTAD----GTIYEYD--LPNKGSYPAFITLG 154 (300)
T ss_dssp EEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETT---TTEEEEECTT----SCEEEEE--CSSTTCCEEEEEEC
T ss_pred EEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccC---CCeEEEECCC----CCEEEcc--CCCCCCCceeEEEC
Confidence 6678887 666544322 1112223344468999987542 2468889986 2222211 111 1222234444
Q ss_pred cCCcEEEEcCccCCeEEEEeCCCCCCCeeeeccccccCCCCCCCCccceEEE-ecCCcEEEEEc--CeeEEEeccCCeEE
Q 048017 189 PDNRIIVVGGRRVFTYEFYPKIDSLSSSLYLRFLIETRDPGEENNLYPFLHL-LPDGNLFIFAN--RRSILFDYINNKLV 265 (566)
Q Consensus 189 ~dG~VyvvGG~~~~s~E~yP~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~-l~~G~Ifv~Gg--~~~e~yDp~t~~W~ 265 (566)
++|++|+..... ..+.+|.... ........ . ...+|...+ -++|+||+... ....+||+ ++++.
T Consensus 155 ~~g~l~v~~~~~-~~i~~~~~~g---~~~~~~~~-~-------~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~ 221 (300)
T 2qc5_A 155 SDNALWFTENQN-NSIGRITNTG---KLEEYPLP-T-------NAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEIS 221 (300)
T ss_dssp TTSSEEEEETTT-TEEEEECTTC---CEEEEECS-S-------TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE
T ss_pred CCCCEEEEecCC-CeEEEECCCC---cEEEeeCC-C-------CCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEE
Confidence 689998865322 3344552222 22221110 0 012344433 35899998763 45788999 55554
No 161
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=87.80 E-value=18 Score=35.10 Aligned_cols=136 Identities=17% Similarity=0.260 Sum_probs=69.8
Q ss_pred eEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEec
Q 048017 110 HSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILP 189 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~ 189 (566)
.+.+||..+++-...-..+.....+..+.+++.++++|+.+ ..+++||.. ...-..+. ....+-.+....+
T Consensus 88 ~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D---~~i~vwd~~---~~~~~~~~---~h~~~v~~~~~~~ 158 (319)
T 3frx_A 88 TLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRD---KTIKVWTIK---GQCLATLL---GHNDWVSQVRVVP 158 (319)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETT---SCEEEEETT---SCEEEEEC---CCSSCEEEEEECC
T ss_pred EEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCC---CeEEEEECC---CCeEEEEe---ccCCcEEEEEEcc
Confidence 47889998876432211222222233455789999998864 578889876 32211111 1111212222232
Q ss_pred ------CCcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEcC--eeEEEecc
Q 048017 190 ------DNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANR--RSILFDYI 260 (566)
Q Consensus 190 ------dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~--~~e~yDp~ 260 (566)
++..++.|+.+ ..+.+| ..+ .-....+. .... .--.+...++|++++.|+. ...+||..
T Consensus 159 ~~~~~~~~~~l~s~~~d-~~i~~wd~~~----~~~~~~~~-~h~~------~v~~~~~sp~g~~l~s~~~dg~i~iwd~~ 226 (319)
T 3frx_A 159 NEKADDDSVTIISAGND-KMVKAWNLNQ----FQIEADFI-GHNS------NINTLTASPDGTLIASAGKDGEIMLWNLA 226 (319)
T ss_dssp C------CCEEEEEETT-SCEEEEETTT----TEEEEEEC-CCCS------CEEEEEECTTSSEEEEEETTCEEEEEETT
T ss_pred CCCCCCCccEEEEEeCC-CEEEEEECCc----chhheeec-CCCC------cEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 44567777655 345566 221 11111111 1100 0112344679999999885 46789998
Q ss_pred CCeEEE
Q 048017 261 NNKLVK 266 (566)
Q Consensus 261 t~~W~~ 266 (566)
+.+-..
T Consensus 227 ~~~~~~ 232 (319)
T 3frx_A 227 AKKAMY 232 (319)
T ss_dssp TTEEEE
T ss_pred CCcEEE
Confidence 876543
No 162
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=87.75 E-value=9.1 Score=36.85 Aligned_cols=138 Identities=12% Similarity=0.104 Sum_probs=66.5
Q ss_pred eEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEec
Q 048017 110 HSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILP 189 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~ 189 (566)
.+.+||..+.+....-..+.....+.++.+||+++++|+.+ ..+.+||.. +. ..+.. +.....-.+.+..+
T Consensus 196 ~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D---g~i~iwd~~---~~--~~~~~-~~~~~~v~~~~~~~ 266 (340)
T 4aow_A 196 LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKD---GQAMLWDLN---EG--KHLYT-LDGGDIINALCFSP 266 (340)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT---CEEEEEETT---TT--EEEEE-EECSSCEEEEEECS
T ss_pred EEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCC---CeEEEEEec---cC--ceeee-ecCCceEEeeecCC
Confidence 46788888876544322222222234456799999999864 578999987 32 22222 33333223333444
Q ss_pred CCcEEEEcCccCCeEEEE-eCCCCCCCe-eeec--cccccCCCCCCCCccceEEEecCCcEEEEEcCe--eEEEeccCCe
Q 048017 190 DNRIIVVGGRRVFTYEFY-PKIDSLSSS-LYLR--FLIETRDPGEENNLYPFLHLLPDGNLFIFANRR--SILFDYINNK 263 (566)
Q Consensus 190 dG~VyvvGG~~~~s~E~y-P~~~~~~~w-~~~p--~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~~--~e~yDp~t~~ 263 (566)
++. +++++.+ ..+.+| .... .. .... ........ ....--.+...+||+.++.|+.+ +.+||.++++
T Consensus 267 ~~~-~~~~~~d-~~i~iwd~~~~---~~~~~~~~~~~~~~~~~--h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 267 NRY-WLCAATG-PSIKIWDLEGK---IIVDELKQEVISTSSKA--EPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp SSS-EEEEEET-TEEEEEETTTT---EEEEEECCC-------C--CCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred CCc-eeeccCC-CEEEEEECCCC---eEEEeccccceeeeccC--CCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 454 4455543 345555 2211 00 0010 00000000 00000012335799988888754 6678877764
No 163
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=87.30 E-value=34 Score=36.56 Aligned_cols=212 Identities=10% Similarity=0.038 Sum_probs=101.3
Q ss_pred eEEEEEC--CCCcEEe-CcCCCcccccCCeecC----CCcEEEEcCCCCCCCeEEEEcCCCCCCCcccc-cCc-ccc---
Q 048017 110 HSVLYDI--ASNTFRP-LLLQTDTWCSSGAVLS----DGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVE-LSK-NLW--- 177 (566)
Q Consensus 110 ~~~~yDp--~t~~w~~-l~~~~~~~c~~~~~l~----dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~-~~~-~M~--- 177 (566)
.+.+||. ++.+... +..-... .+.++-+ ||+.+.++.+. ..++.++|.. +.+-.. ++. .+.
T Consensus 201 ~V~v~D~~~~t~~~~~~i~~g~~p--~~va~sp~~~~dg~~l~v~~~~--~~~v~v~D~~---t~~~~~~i~~~g~~~~~ 273 (543)
T 1nir_A 201 RIDMIDLWAKEPTKVAEIKIGIEA--RSVESSKFKGYEDRYTIAGAYW--PPQFAIMDGE---TLEPKQIVSTRGMTVDT 273 (543)
T ss_dssp EEEEEETTSSSCEEEEEEECCSEE--EEEEECCSTTCTTTEEEEEEEE--SSEEEEEETT---TCCEEEEEECCEECSSS
T ss_pred eEEEEECcCCCCcEEEEEecCCCc--ceEEeCCCcCCCCCEEEEEEcc--CCeEEEEecc---ccccceeecccCcccCc
Confidence 4788999 6665422 2211122 2234556 89988887643 3678889977 433211 110 011
Q ss_pred -----cccCcceEEEecCCcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccce-EEEecCCcEEEEE
Q 048017 178 -----DRRWYASNQILPDNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPF-LHLLPDGNLFIFA 250 (566)
Q Consensus 178 -----~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~-~~~l~~G~Ifv~G 250 (566)
.+| -.+.+.-++++.+++.......+.++ ..+.........+ . ..+|+ ....++|+.++++
T Consensus 274 ~~~~~~~~-v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~----~-------~~~~~~~~~spdg~~l~va 341 (543)
T 1nir_A 274 QTYHPEPR-VAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG----A-------APFLHDGGWDSSHRYFMTA 341 (543)
T ss_dssp CCEESCCC-EEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE----C-------CSSCCCEEECTTSCEEEEE
T ss_pred cccccCCc-eEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec----c-------CcCccCceECCCCCEEEEE
Confidence 112 12333344566665555444455555 2221000000111 0 01222 3446799855544
Q ss_pred c---CeeEEEeccCCeEEEeecccCCCCCCccCCCCceeeecccccCCCCCCCCCCCCCCEEEEEcCCCCCccccccccc
Q 048017 251 N---RRSILFDYINNKLVKEFPVIPGNDKRNYPSTGSSILLPVKLSAGSDGNGTAALPDAEVMVCGGAPAGAFIKSDKES 327 (566)
Q Consensus 251 g---~~~e~yDp~t~~W~~~~p~lp~~~~r~~~~~g~avllpl~~~~~~~~~~y~~~~~gkI~v~GG~~~~~~~~~~~~~ 327 (566)
+ +.+.++|.++++....++ .+ ..-.+..+.....| . .+++|+.+...
T Consensus 342 ~~~~~~v~v~D~~tg~l~~~i~---~g-~~ph~g~g~~~~~p---~------------~g~~~~s~~~~----------- 391 (543)
T 1nir_A 342 ANNSNKVAVIDSKDRRLSALVD---VG-KTPHPGRGANFVHP---K------------YGPVWSTSHLG----------- 391 (543)
T ss_dssp EGGGTEEEEEETTTTEEEEEEE---CS-SSBCCTTCEEEEET---T------------TEEEEEEEBSS-----------
T ss_pred ecCCCeEEEEECCCCeEEEeec---cC-CCCCCCCCcccCCC---C------------CccEEEeccCC-----------
Confidence 3 467889999998764443 21 01111123332211 0 47888876432
Q ss_pred cccccCCeeEEEEeeCC---CCCeEEe-ccCCCccc-ceeEEccCCeEEEEcC
Q 048017 328 VYVEASRTCGRLKVTDK---YPVWSME-FMPMPRVM-SDMLLLPSGDVIIING 375 (566)
Q Consensus 328 ~~~pa~~s~~~~d~~~~---~~~W~~~-~M~~~R~~-~~~vvLpdG~V~vvGG 375 (566)
.+++..||.... ...|+.. .++..-.. .....-|||+-+.++.
T Consensus 392 -----d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~ 439 (543)
T 1nir_A 392 -----DGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDT 439 (543)
T ss_dssp -----SSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECC
T ss_pred -----CceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEec
Confidence 134566775431 1238764 44322111 2233568998777765
No 164
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=87.20 E-value=20 Score=33.90 Aligned_cols=115 Identities=17% Similarity=0.095 Sum_probs=58.7
Q ss_pred ecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEE-ec--CCcEEEEcCccCCeEEEE-eCCC-
Q 048017 137 VLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQI-LP--DNRIIVVGGRRVFTYEFY-PKID- 211 (566)
Q Consensus 137 ~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~-L~--dG~VyvvGG~~~~s~E~y-P~~~- 211 (566)
.-++|+++++|+.+ ..+++||.... ...+..... +......-..+. .+ |++.++.|+.++ .+.+| ....
T Consensus 19 ~~~~~~~l~~~~~d---g~i~iw~~~~~-~~~~~~~~~-~~~~~~~v~~~~~~~~~d~~~l~s~~~dg-~v~vwd~~~~~ 92 (351)
T 3f3f_A 19 YDFYGRHVATCSSD---QHIKVFKLDKD-TSNWELSDS-WRAHDSSIVAIDWASPEYGRIIASASYDK-TVKLWEEDPDQ 92 (351)
T ss_dssp ECSSSSEEEEEETT---SEEEEEEECSS-SCCEEEEEE-EECCSSCEEEEEECCGGGCSEEEEEETTS-CEEEEEECTTS
T ss_pred EcCCCCEEEEeeCC---CeEEEEECCCC-CCcceecce-eccCCCcEEEEEEcCCCCCCEEEEEcCCC-eEEEEecCCCc
Confidence 34588899998864 57888987621 233333322 322222223333 33 589999988764 45566 3321
Q ss_pred ---CCCCeeeeccccccCCCCCCCCccceEEEecC--CcEEEEEcC--eeEEEeccCCe
Q 048017 212 ---SLSSSLYLRFLIETRDPGEENNLYPFLHLLPD--GNLFIFANR--RSILFDYINNK 263 (566)
Q Consensus 212 ---~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~--G~Ifv~Gg~--~~e~yDp~t~~ 263 (566)
....|.....+..... .--.+...++ +++++.|+. ...+||..+.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~------~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 93 EECSGRRWNKLCTLNDSKG------SLYSVKFAPAHLGLKLACLGNDGILRLYDALEPS 145 (351)
T ss_dssp CTTSSCSEEEEEEECCCSS------CEEEEEECCGGGCSEEEEEETTCEEEEEECSSTT
T ss_pred ccccccCcceeeeecccCC------ceeEEEEcCCCCCcEEEEecCCCcEEEecCCChH
Confidence 0111221111111100 0112233456 888888875 46788877653
No 165
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=85.65 E-value=12 Score=41.06 Aligned_cols=139 Identities=17% Similarity=0.219 Sum_probs=71.9
Q ss_pred eEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEec
Q 048017 110 HSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILP 189 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~ 189 (566)
.+.+||..+++-...-..+.....+....++|+.+++|+.+ ..+++||... .+.+...........+-.+++..+
T Consensus 453 ~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D---~~i~iwd~~~--~~~~~~~~~~~~h~~~v~~~~~~~ 527 (694)
T 3dm0_A 453 ELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRD---RTIKLWNTLG--ECKYTISEGGEGHRDWVSCVRFSP 527 (694)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT---SCEEEECTTS--CEEEEECSSTTSCSSCEEEEEECS
T ss_pred cEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCC---CEEEEEECCC--CcceeeccCCCCCCCcEEEEEEeC
Confidence 37789988876433222222222233455789999998864 5788998752 222222111011122222333344
Q ss_pred CC--cEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEcC--eeEEEeccCCeE
Q 048017 190 DN--RIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANR--RSILFDYINNKL 264 (566)
Q Consensus 190 dG--~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~--~~e~yDp~t~~W 264 (566)
++ ..++.|+.+ .++.+| .... ... ..+.... ..--.+...++|++++.|+. .+.+||..+++-
T Consensus 528 ~~~~~~l~s~s~d-~~v~vwd~~~~---~~~--~~~~~h~------~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~ 595 (694)
T 3dm0_A 528 NTLQPTIVSASWD-KTVKVWNLSNC---KLR--STLAGHT------GYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKK 595 (694)
T ss_dssp CSSSCEEEEEETT-SCEEEEETTTC---CEE--EEECCCS------SCEEEEEECTTSSEEEEEETTSBCEEEETTTTEE
T ss_pred CCCcceEEEEeCC-CeEEEEECCCC---cEE--EEEcCCC------CCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCce
Confidence 54 466666654 456666 3221 111 1111110 01112344579999999875 467899988864
Q ss_pred E
Q 048017 265 V 265 (566)
Q Consensus 265 ~ 265 (566)
.
T Consensus 596 ~ 596 (694)
T 3dm0_A 596 L 596 (694)
T ss_dssp E
T ss_pred E
Confidence 4
No 166
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=85.19 E-value=22 Score=34.19 Aligned_cols=143 Identities=10% Similarity=0.057 Sum_probs=73.9
Q ss_pred EEEEECCCCcEEeCcCC----CcccccCCeecCCCcEEEEc-CCC-------CCCCeEEEEcCCCCCCCcccccCccccc
Q 048017 111 SVLYDIASNTFRPLLLQ----TDTWCSSGAVLSDGTLVQTG-GYN-------VGDRVIRLFTPCNDEGCDWVELSKNLWD 178 (566)
Q Consensus 111 ~~~yDp~t~~w~~l~~~----~~~~c~~~~~l~dG~l~vvG-G~~-------~g~~~v~~ydP~~~~t~~W~~~~~~M~~ 178 (566)
+.+||+++++++.+... ...+....++-++|++|+.. +.. .....+..+|+. . +...+...+..
T Consensus 75 l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~---g-~~~~~~~~~~~ 150 (297)
T 3g4e_A 75 FCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD---H-HVKKYFDQVDI 150 (297)
T ss_dssp EEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT---S-CEEEEEEEESB
T ss_pred EEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC---C-CEEEEeecccc
Confidence 67899999988766432 12234445667899988753 111 122467788875 2 22222211222
Q ss_pred ccCcceEEEecCCc-EEEEcCccCCeEEEE-e--CCCCCCCeeeeccccccCCCCCCCCccceEEE-ecCCcEEEEE--c
Q 048017 179 RRWYASNQILPDNR-IIVVGGRRVFTYEFY-P--KIDSLSSSLYLRFLIETRDPGEENNLYPFLHL-LPDGNLFIFA--N 251 (566)
Q Consensus 179 ~R~y~s~~~L~dG~-VyvvGG~~~~s~E~y-P--~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~-l~~G~Ifv~G--g 251 (566)
+ .+.+.-+||+ +|+..... ..+..| . .+. .......+.... ....+|...+ -.+|+||+.. +
T Consensus 151 p---ngi~~spdg~~lyv~~~~~-~~i~~~~~d~~~G---~~~~~~~~~~~~----~~~~~p~g~~~d~~G~lwva~~~~ 219 (297)
T 3g4e_A 151 S---NGLDWSLDHKIFYYIDSLS-YSVDAFDYDLQTG---QISNRRSVYKLE----KEEQIPDGMCIDAEGKLWVACYNG 219 (297)
T ss_dssp E---EEEEECTTSCEEEEEEGGG-TEEEEEEECTTTC---CEEEEEEEEECC----GGGCEEEEEEEBTTSCEEEEEETT
T ss_pred c---cceEEcCCCCEEEEecCCC-CcEEEEeccCCCC---cccCcEEEEECC----CCCCCCCeeEECCCCCEEEEEcCC
Confidence 2 2455556886 66654332 344555 2 221 111000000000 0012444433 4689999875 3
Q ss_pred CeeEEEeccCCeEEEee
Q 048017 252 RRSILFDYINNKLVKEF 268 (566)
Q Consensus 252 ~~~e~yDp~t~~W~~~~ 268 (566)
..+.+||+++++....+
T Consensus 220 ~~v~~~d~~tG~~~~~i 236 (297)
T 3g4e_A 220 GRVIRLDPVTGKRLQTV 236 (297)
T ss_dssp TEEEEECTTTCCEEEEE
T ss_pred CEEEEEcCCCceEEEEE
Confidence 45889999987765444
No 167
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=84.22 E-value=39 Score=34.43 Aligned_cols=138 Identities=11% Similarity=0.084 Sum_probs=71.6
Q ss_pred EEEEECC--CCcEEeC-cC-CCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccc--cCcccc-cccCcc
Q 048017 111 SVLYDIA--SNTFRPL-LL-QTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVE--LSKNLW-DRRWYA 183 (566)
Q Consensus 111 ~~~yDp~--t~~w~~l-~~-~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~--~~~~M~-~~R~y~ 183 (566)
+.+||.. +++.... .. .....+.+....++|+.+++|+.. ..+..|+.. +.+... ... +. ....-.
T Consensus 127 v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~---g~v~~~~~~---~~~~~~~~~~~-~~~h~~~v~ 199 (450)
T 2vdu_B 127 LLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKF---GDVYSIDIN---SIPEEKFTQEP-ILGHVSMLT 199 (450)
T ss_dssp EEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT---SEEEEEETT---SCCCSSCCCCC-SEECSSCEE
T ss_pred EEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCC---CcEEEEecC---Cccccccccee-eecccCceE
Confidence 6788877 5443222 11 111222334556799999998753 467888865 322221 111 22 112223
Q ss_pred eEEEecC---CcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccce-EEEecCCcEEEEEcC--eeEE
Q 048017 184 SNQILPD---NRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPF-LHLLPDGNLFIFANR--RSIL 256 (566)
Q Consensus 184 s~~~L~d---G~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~-~~~l~~G~Ifv~Gg~--~~e~ 256 (566)
+++.-+| |+.++.|+.+. .+.+| ..+. ... ..++.... .... +... +|++++.|+. ...+
T Consensus 200 ~~~~sp~~~~~~~l~s~~~d~-~i~vwd~~~~---~~~-~~~~~~h~-------~~v~~~~~s-d~~~l~s~~~d~~v~v 266 (450)
T 2vdu_B 200 DVHLIKDSDGHQFIITSDRDE-HIKISHYPQC---FIV-DKWLFGHK-------HFVSSICCG-KDYLLLSAGGDDKIFA 266 (450)
T ss_dssp EEEEEECTTSCEEEEEEETTS-CEEEEEESCT---TCE-EEECCCCS-------SCEEEEEEC-STTEEEEEESSSEEEE
T ss_pred EEEEcCCCCCCcEEEEEcCCC-cEEEEECCCC---cee-eeeecCCC-------CceEEEEEC-CCCEEEEEeCCCeEEE
Confidence 3445568 88888888663 45666 3321 111 11111110 1111 2223 8998888875 4678
Q ss_pred EeccCCeEEEee
Q 048017 257 FDYINNKLVKEF 268 (566)
Q Consensus 257 yDp~t~~W~~~~ 268 (566)
||..+++..+.+
T Consensus 267 wd~~~~~~~~~~ 278 (450)
T 2vdu_B 267 WDWKTGKNLSTF 278 (450)
T ss_dssp EETTTCCEEEEE
T ss_pred EECCCCcEeeee
Confidence 999988765444
No 168
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=83.99 E-value=33 Score=33.45 Aligned_cols=118 Identities=17% Similarity=0.106 Sum_probs=59.2
Q ss_pred CeecCCCcEEEEcCCCC---------------------CCCeEEEEcCCCCCCCcccccCc--ccccccCcceEEEecCC
Q 048017 135 GAVLSDGTLVQTGGYNV---------------------GDRVIRLFTPCNDEGCDWVELSK--NLWDRRWYASNQILPDN 191 (566)
Q Consensus 135 ~~~l~dG~l~vvGG~~~---------------------g~~~v~~ydP~~~~t~~W~~~~~--~M~~~R~y~s~~~L~dG 191 (566)
.++-++|++|+++.... ....+.++|+. +.+...... .+..+ .+.+.-++|
T Consensus 29 va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~---~g~~~~~~~~~~~~~p---~gia~d~~g 102 (329)
T 3fvz_A 29 VALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPN---NAEILQSSGKNLFYLP---HGLSIDTDG 102 (329)
T ss_dssp EEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTT---TCCEEEEECTTTCSSE---EEEEECTTS
T ss_pred EEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECC---CCeEEeccCCCccCCc---eEEEECCCC
Confidence 45557889998865331 01368899997 454332111 11222 234555689
Q ss_pred cEEEEcCccCCeEEEE-eCCCCCCCe-eeec-cccccCCCCCCCCccceEEE-ec-CCcEEEEEc---CeeEEEeccCCe
Q 048017 192 RIIVVGGRRVFTYEFY-PKIDSLSSS-LYLR-FLIETRDPGEENNLYPFLHL-LP-DGNLFIFAN---RRSILFDYINNK 263 (566)
Q Consensus 192 ~VyvvGG~~~~s~E~y-P~~~~~~~w-~~~p-~l~~~~d~~~~~~~yp~~~~-l~-~G~Ifv~Gg---~~~e~yDp~t~~ 263 (566)
++||....+ ..+..| +... ... .... ....... ...-.+|...+ .+ +|+||+... ....+||+....
T Consensus 103 ~l~v~d~~~-~~v~~~~~~g~--~~~~~~~~~~~~~g~~--~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~ 177 (329)
T 3fvz_A 103 NYWVTDVAL-HQVFKLDPHSK--EGPLLILGRSMQPGSD--QNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKF 177 (329)
T ss_dssp CEEEEETTT-TEEEEECTTCS--SCCSEEESBTTBCCCS--TTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSCE
T ss_pred CEEEEECCC-CEEEEEeCCCC--eEEEEEecccCCCCCC--ccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCE
Confidence 999886543 345555 4321 001 1110 0000000 00112465444 45 799999874 357789965443
No 169
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=82.17 E-value=39 Score=32.94 Aligned_cols=50 Identities=20% Similarity=0.216 Sum_probs=31.0
Q ss_pred eEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCC
Q 048017 110 HSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPC 162 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~ 162 (566)
.+.+||..+++....-..+.....+..+.+||+.+++||.+ ..+++||..
T Consensus 99 ~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d---~~i~~wd~~ 148 (343)
T 2xzm_R 99 TLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAE---REIKLWNIL 148 (343)
T ss_dssp EEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETT---SCEEEEESS
T ss_pred cEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCC---CEEEEEecc
Confidence 47789998876432211122112223455799999998864 568888875
No 170
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=79.90 E-value=42 Score=31.79 Aligned_cols=64 Identities=16% Similarity=-0.021 Sum_probs=35.2
Q ss_pred eecCCCcEEEE-------cCCCCCCCeEEEEcCCCCCCCcccccCc-ccc-cccCcceEEEecC-CcEEEEcCccCCeEE
Q 048017 136 AVLSDGTLVQT-------GGYNVGDRVIRLFTPCNDEGCDWVELSK-NLW-DRRWYASNQILPD-NRIIVVGGRRVFTYE 205 (566)
Q Consensus 136 ~~l~dG~l~vv-------GG~~~g~~~v~~ydP~~~~t~~W~~~~~-~M~-~~R~y~s~~~L~d-G~VyvvGG~~~~s~E 205 (566)
++..+|++|++ +.. ...+.+||+. +.++..... ... ....-.+.+.-+| |++|+....+ .+.
T Consensus 24 ~~~~~g~l~~~~~~~~~~~~~---~~~i~~~d~~---~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~--~l~ 95 (314)
T 1pjx_A 24 VFDKNGDFYIVAPEVEVNGKP---AGEILRIDLK---TGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRL--GLL 95 (314)
T ss_dssp EECTTSCEEEEETTCEETTEE---CCEEEEECTT---TCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTT--EEE
T ss_pred eECCCCCEEEEEeccccCCCC---CCEEEEEeCC---CCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCC--CEE
Confidence 33468899988 321 2568899987 666654321 000 1112223444467 8999876432 344
Q ss_pred EE
Q 048017 206 FY 207 (566)
Q Consensus 206 ~y 207 (566)
+|
T Consensus 96 ~~ 97 (314)
T 1pjx_A 96 VV 97 (314)
T ss_dssp EE
T ss_pred EE
Confidence 55
No 171
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=79.11 E-value=15 Score=36.55 Aligned_cols=49 Identities=6% Similarity=0.013 Sum_probs=31.5
Q ss_pred EEEEECCCCcEEe-CcCC-CcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCC
Q 048017 111 SVLYDIASNTFRP-LLLQ-TDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPC 162 (566)
Q Consensus 111 ~~~yDp~t~~w~~-l~~~-~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~ 162 (566)
+.+||..+++-.. +... +.......+.-+||+.+++|+.+ ..+++||..
T Consensus 220 v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d---~~v~iw~~~ 270 (355)
T 3vu4_A 220 IRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDK---WTLHVFEIF 270 (355)
T ss_dssp EEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETT---CEEEEEESS
T ss_pred EEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECC---CEEEEEEcc
Confidence 6789988776432 2211 22223334566799999999864 678889875
No 172
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=77.74 E-value=30 Score=33.72 Aligned_cols=98 Identities=8% Similarity=-0.053 Sum_probs=51.6
Q ss_pred CCEEEEEcCCCCCccccccccccccccCCeeEEEEeeCCCCCeEEe-ccCCCccc-ceeEEccCCeEEEEcCCCCCCCCC
Q 048017 306 DAEVMVCGGAPAGAFIKSDKESVYVEASRTCGRLKVTDKYPVWSME-FMPMPRVM-SDMLLLPSGDVIIINGASNGTAGW 383 (566)
Q Consensus 306 ~gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~-~M~~~R~~-~~~vvLpdG~V~vvGG~~~g~~~~ 383 (566)
+++.++.|+.+ .++..+|+......++.. .+...... .+...-|+|++++.|+.+ + .
T Consensus 118 ~g~~las~s~D-----------------~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D-~---~ 176 (330)
T 2hes_X 118 DGYYLATCSRD-----------------KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYD-D---T 176 (330)
T ss_dssp TSCEEEEEETT-----------------SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETT-S---C
T ss_pred CCCEEEEEeCC-----------------CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCC-C---e
Confidence 67788888765 234556664323344433 22211111 122345899999999876 3 2
Q ss_pred ccccCc-CCcEEeccCCCCCCcceeEEEEcCC--CcEEEecCCC
Q 048017 384 EDAEEP-DRRFVVLNPSKIPRMYHSSAVVLPD--GRILVGGSNP 424 (566)
Q Consensus 384 ~~~ydP-t~~Wt~~~~~~~~R~yhs~a~Llpd--G~V~v~GG~~ 424 (566)
...||. ++.|..+..+.--...-......|+ +..++.|+..
T Consensus 177 i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D 220 (330)
T 2hes_X 177 VRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDD 220 (330)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETT
T ss_pred EEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCC
Confidence 345666 5556554433211111123345677 6777888754
No 173
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=76.62 E-value=52 Score=31.12 Aligned_cols=111 Identities=11% Similarity=0.083 Sum_probs=62.5
Q ss_pred CceEEccCCCccceeEEEEeeCCe-EEEEeccCCCCCCCCCCCCccccCCCCCCCcccceEEEEECCCCcEEeCcCCCcc
Q 048017 52 GQWVLLQSSIGISAMHMQVLNNDK-VIIFDRTDMGPSNLSLPIDKCRKEGDVGQLDCTAHSVLYDIASNTFRPLLLQTDT 130 (566)
Q Consensus 52 g~W~~l~~~~~~~a~h~~~l~~gk-V~~~gg~~~~~s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~ 130 (566)
.+++.+... .......+.-++|+ +|+++..+ ..+..||+.++ .+...... .
T Consensus 18 ~~~~~l~~~-~~~~eg~~~d~~g~~l~~~~~~~-------------------------~~i~~~~~~~~-~~~~~~~~-~ 69 (296)
T 3e5z_A 18 AEARRLADG-FTWTEGPVYVPARSAVIFSDVRQ-------------------------NRTWAWSDDGQ-LSPEMHPS-H 69 (296)
T ss_dssp CCCEEEECC-CSSEEEEEEEGGGTEEEEEEGGG-------------------------TEEEEEETTSC-EEEEESSC-S
T ss_pred CcEEEEecC-CccccCCeEeCCCCEEEEEeCCC-------------------------CEEEEEECCCC-eEEEECCC-C
Confidence 455666532 12233444456776 88887532 13678999887 55543321 1
Q ss_pred cccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccc--cCcceEEEecCCcEEEE
Q 048017 131 WCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDR--RWYASNQILPDNRIIVV 196 (566)
Q Consensus 131 ~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~--R~y~s~~~L~dG~Vyvv 196 (566)
...+.+.-+||++++.... ...+.+||+. +.+.+......... ..-...+.-+||++|+.
T Consensus 70 ~~~~l~~~~dg~l~v~~~~---~~~i~~~d~~---~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vt 131 (296)
T 3e5z_A 70 HQNGHCLNKQGHLIACSHG---LRRLERQREP---GGEWESIADSFEGKKLNSPNDVCLAPDGSLWFS 131 (296)
T ss_dssp SEEEEEECTTCCEEEEETT---TTEEEEECST---TCCEEEEECEETTEECCCCCCEEECTTSCEEEE
T ss_pred CcceeeECCCCcEEEEecC---CCeEEEEcCC---CCcEEEEeeccCCCCCCCCCCEEECCCCCEEEE
Confidence 1223344578999887532 3578999997 56655442201111 11224566679999997
No 174
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=76.12 E-value=54 Score=35.34 Aligned_cols=175 Identities=15% Similarity=0.135 Sum_probs=89.6
Q ss_pred CCCCCeEEe----ccCCCcccceeEEc-c-------CCeEEEEcCCCCC-CC--CCc-cccCcCCcEEeccCCCCCCcce
Q 048017 343 DKYPVWSME----FMPMPRVMSDMLLL-P-------SGDVIIINGASNG-TA--GWE-DAEEPDRRFVVLNPSKIPRMYH 406 (566)
Q Consensus 343 ~~~~~W~~~----~M~~~R~~~~~vvL-p-------dG~V~vvGG~~~g-~~--~~~-~~ydPt~~Wt~~~~~~~~R~yh 406 (566)
+...+|+.. .|+.+.++...+.+ + ++.++++...... .. +.. ..+|=+.+|+....+.......
T Consensus 245 DgG~tW~~~~~~~~l~~p~~~~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~R~~~~l~~S~D~G~tW~~~~~l~~~~~~Y 324 (601)
T 1w8o_A 245 DGGHSYGPVTIDRDLPDPTNNASIIRAFPDAPAGSARAKVLLFSNAASQTSRSQGTIRMSCDDGQTWPVSKVFQPGSMSY 324 (601)
T ss_dssp STTSCCCCCEEEEEEECSSCCCEEEESSTTCCTTCSGGGCEEEEEECCSSSSEEEEEEEESSTTSCCCEEEEEEEEECCC
T ss_pred CCCCCCCCCeecCcCCCCCccceEEEecccccCCCCCCCEEEEECCCCCCcccceEEEEeCCCCCCCCCceEeCCCCCCC
Confidence 345788753 46666665554433 2 4455555432211 00 000 1123377887643222222223
Q ss_pred eEEEEcCCCcEEEecCCCCcccccCCCCCCCcceEEEEeccccCCCCCCCCCceeecCCccceeecCCeEEEEEEecCCC
Q 048017 407 SSAVVLPDGRILVGGSNPHRRYNFTAYPYPTDLSLEAFHPHYLDPENAYMRPSILSLESIDRTVSYNEVFAVTFELSSYS 486 (566)
Q Consensus 407 s~a~LlpdG~V~v~GG~~~~~~~~~~~~~~~~~~vE~y~Ppyl~~~~~~~RP~i~~~p~~~~~~~~g~~~~v~~~~~~~~ 486 (566)
+..+.++||+|+++.-.. . ......|....|... ..| . .+|. .++..|++++|+++...+.
T Consensus 325 ~~l~~~~dg~i~~~ye~~-~-----------~i~~~~~~~~~l~~~---~~~-~-~~~~--~~~~~g~~~~~~~~vtn~~ 385 (601)
T 1w8o_A 325 STLTALPDGTYGLLYEPG-T-----------GIRYANFNLAWLGGI---CAP-F-TIPD--VALEPGQQVTVPVAVTNQS 385 (601)
T ss_dssp EEEEECTTSCEEEEECCS-S-----------EEEEEEECHHHHTBC---SCC-E-ECCC--EEECTTCEEEEEEEEECCS
T ss_pred CeEEEcCCCeEEEEEecC-C-----------cceEEEecHHHhccc---cCC-C-cCcc--ceecCCceeEEEEEEECCC
Confidence 355567999999885321 1 234567777777643 122 2 4453 6688899998888765432
Q ss_pred CC--cceEEEEEccCccccCCCCCcceEEeeeeeeeecccc-eEEEEEEcCCCCCcCCCcceEEEE
Q 048017 487 PS--GEISVSLMTPSFTTHSFAMNQRLVVLNVVSVSQLSVY-AYKVVVNGPPTATVAPPGYYMMFV 549 (566)
Q Consensus 487 ~~--~~~~v~l~~~~~~THs~n~~QR~v~L~~~~~~~~g~~-~~~~~v~~P~~~~~~ppG~ymlfv 549 (566)
.. .-.+++|..+...| .+- .+.. ...|.. +-.++|++|.. +.+|.|+|=+
T Consensus 386 ~~~~~~~~~~~~~~~~~~------~~~-~~~~---~~~g~~~t~~~~vt~~~~---~~~g~y~l~~ 438 (601)
T 1w8o_A 386 GIAVPKPSLQLDASPDWQ------VQG-SVEP---LMPGRQAKGQVTITVPAG---TTPGRYRVGA 438 (601)
T ss_dssp SSCBSSCEEEEECCTTSE------EEE-EECC---BCTTCEEEEEEEEECCTT---CCCEEEEEEE
T ss_pred ceeccCceEEEecCCCcE------Eec-cccc---cCCCCceEEEEEEecCCC---CCCCcEEeeE
Confidence 11 12467766544333 111 1111 122321 23447788775 5589998743
No 175
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=76.04 E-value=54 Score=31.02 Aligned_cols=138 Identities=13% Similarity=0.051 Sum_probs=68.6
Q ss_pred eEEEEECCCCcEEeCcCCCcc--cccCCeecCCCc-EEEEcCCCCCCCeEEEEcCCCCCCCcccccCccccc----ccCc
Q 048017 110 HSVLYDIASNTFRPLLLQTDT--WCSSGAVLSDGT-LVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWD----RRWY 182 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~~~--~c~~~~~l~dG~-l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~----~R~y 182 (566)
.+.+||+.+.+....-..... .....++.+||+ +|+.+.. ...+.+||+. +.+-...-. ... ...-
T Consensus 12 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~---~~~v~~~d~~---~~~~~~~~~-~~~~~~~~~~~ 84 (337)
T 1pby_B 12 KLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNK---SESLVKIDLV---TGETLGRID-LSTPEERVKSL 84 (337)
T ss_dssp EEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETT---TTEEEEEETT---TCCEEEEEE-CCBTTEEEECT
T ss_pred eEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCC---CCeEEEEECC---CCCeEeeEE-cCCcccccccc
Confidence 367788887765432211111 123455667885 5566543 3578999987 444321111 111 0122
Q ss_pred ceEEEecCCc-EEEEcCc----------cCCeEEEE-eCCCCCCCee-eeccccccCCCCCCCCccc-eEEEecCCcEEE
Q 048017 183 ASNQILPDNR-IIVVGGR----------RVFTYEFY-PKIDSLSSSL-YLRFLIETRDPGEENNLYP-FLHLLPDGNLFI 248 (566)
Q Consensus 183 ~s~~~L~dG~-VyvvGG~----------~~~s~E~y-P~~~~~~~w~-~~p~l~~~~d~~~~~~~yp-~~~~l~~G~Ifv 248 (566)
...+.-+||+ +|+.... ....+.+| ..+. ... ..+.. ..+ .+...+||+.++
T Consensus 85 ~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~---~~~~~~~~~-----------~~~~~~~~s~dg~~l~ 150 (337)
T 1pby_B 85 FGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETL---SRRKAFEAP-----------RQITMLAWARDGSKLY 150 (337)
T ss_dssp TCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTT---EEEEEEECC-----------SSCCCEEECTTSSCEE
T ss_pred cceEECCCCCEEEEEecccccccccccccCceEEEEECCCC---cEEEEEeCC-----------CCcceeEECCCCCEEE
Confidence 3455556885 5544311 12345556 3321 111 11110 011 234567888555
Q ss_pred EEcCeeEEEeccCCeEEEee
Q 048017 249 FANRRSILFDYINNKLVKEF 268 (566)
Q Consensus 249 ~Gg~~~e~yDp~t~~W~~~~ 268 (566)
+++....+||..+++....+
T Consensus 151 ~~~~~i~~~d~~~~~~~~~~ 170 (337)
T 1pby_B 151 GLGRDLHVMDPEAGTLVEDK 170 (337)
T ss_dssp EESSSEEEEETTTTEEEEEE
T ss_pred EeCCeEEEEECCCCcEeeee
Confidence 55677889999998765433
No 176
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=75.72 E-value=24 Score=33.72 Aligned_cols=102 Identities=15% Similarity=0.144 Sum_probs=60.6
Q ss_pred CeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccc---cCcceEEEecCCcEEEEcCccCCeEEEE-eCC
Q 048017 135 GAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDR---RWYASNQILPDNRIIVVGGRRVFTYEFY-PKI 210 (566)
Q Consensus 135 ~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~---R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~ 210 (566)
..+-++|.||++ .+ -.+...+|-++..+.|...+. .-.. +-++....-++|.||++.+ +.-+... |..
T Consensus 93 ~~fD~~G~LYav---~d--G~iyr~~pP~~~~~~Wl~~a~-~vg~~gw~~~~~lff~p~G~Lyav~d--g~lyr~~~P~~ 164 (236)
T 1tl2_A 93 LFFDPNGYLYAV---SK--DKLYKASPPQSDTDNWIARAT-EVGSGGWSGFKFLFFHPNGYLYAVHG--QQFYKALPPVS 164 (236)
T ss_dssp EEECTTSCEEEE---ET--TEEEEESCCCSTTCCHHHHSE-EEECSSGGGEEEEEECTTSCEEEEET--TEEEEECCCSS
T ss_pred EEECCCCCEEEe---CC--CEEEEeCCCcCCCCceecccc-EeccCCCCceEEEEECCCceEEEEeC--CcEEecCCCCC
Confidence 445568999999 22 367677774444678976544 2212 2346666778999999983 2233333 533
Q ss_pred CCCCCee-eeccccccCCCCCCCCccceEEEecCCcEEEEE
Q 048017 211 DSLSSSL-YLRFLIETRDPGEENNLYPFLHLLPDGNLFIFA 250 (566)
Q Consensus 211 ~~~~~w~-~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~G 250 (566)
....|. ....+-+ ...+.|.+++..++|.||.+-
T Consensus 165 -~~~~wl~~~~~~g~-----~g~~~yr~l~f~~~G~l~~v~ 199 (236)
T 1tl2_A 165 -NQDNWLARATKIGQ-----GGWDTFKFLFFSSVGTLFGVQ 199 (236)
T ss_dssp -TTCCHHHHCEEEES-----SSGGGEEEEEECTTSCEEEEE
T ss_pred -CCcccccccceecc-----CCcceEEEEEECCCCcEEEEe
Confidence 234563 2222221 135678888777889888654
No 177
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=74.29 E-value=30 Score=34.77 Aligned_cols=69 Identities=13% Similarity=0.071 Sum_probs=38.9
Q ss_pred CCeecC-CCcEEEEcCCCCCCCeEEEEcCCCCCCCc-ccccCcccccccCcceEEEecCCcEEEEcCccCCeEEEE
Q 048017 134 SGAVLS-DGTLVQTGGYNVGDRVIRLFTPCNDEGCD-WVELSKNLWDRRWYASNQILPDNRIIVVGGRRVFTYEFY 207 (566)
Q Consensus 134 ~~~~l~-dG~l~vvGG~~~g~~~v~~ydP~~~~t~~-W~~~~~~M~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y 207 (566)
+.++.+ ||+++++|+.+ ..+++||........ +..... +.....-.+++..++++.++.|+.++ .+.+|
T Consensus 68 ~~~~s~~~~~~l~s~s~d---g~v~vwd~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~s~dg-~i~vw 138 (437)
T 3gre_A 68 SSAVSPGETPYLITGSDQ---GVIKIWNLKEIIVGEVYSSSLT-YDCSSTVTQITMIPNFDAFAVSSKDG-QIIVL 138 (437)
T ss_dssp EEEEECSSSCEEEEEETT---SEEEEEEHHHHHTTCCCSCSEE-EECSSCEEEEEECTTSSEEEEEETTS-EEEEE
T ss_pred EEEECCCCCCEEEEecCC---ceEEEeECcccccCcccceeee-ccCCCCEEEEEEeCCCCEEEEEeCCC-EEEEE
Confidence 345567 89999999864 578899875100021 111111 12223333455567889999888764 34444
No 178
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=73.72 E-value=65 Score=30.84 Aligned_cols=138 Identities=14% Similarity=0.071 Sum_probs=71.9
Q ss_pred eEEEEECCCCcEEeCcCCC----cccccCCeecCCCcEEEE----cCCC----------CCCCeEEEEcCCCCCCCcccc
Q 048017 110 HSVLYDIASNTFRPLLLQT----DTWCSSGAVLSDGTLVQT----GGYN----------VGDRVIRLFTPCNDEGCDWVE 171 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~----~~~c~~~~~l~dG~l~vv----GG~~----------~g~~~v~~ydP~~~~t~~W~~ 171 (566)
.+.+||+. ++.+.+.... .......++-+||+||++ |-.. .+...+.+|||. +.+++.
T Consensus 108 ~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~---~g~~~~ 183 (305)
T 3dr2_A 108 AITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPD---GSPLQR 183 (305)
T ss_dssp EEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSS---SCCCEE
T ss_pred EEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCC---CCcEEE
Confidence 36677775 6665553211 112334566679999996 4321 123568899997 666654
Q ss_pred cCcccccccCcceEEEecCCc-EEEEcCcc----CCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccc-eEEEecCC
Q 048017 172 LSKNLWDRRWYASNQILPDNR-IIVVGGRR----VFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYP-FLHLLPDG 244 (566)
Q Consensus 172 ~~~~M~~~R~y~s~~~L~dG~-VyvvGG~~----~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp-~~~~l~~G 244 (566)
+.. +..+ .+.+.-+||+ +|+..-.. ...+..| ...+ ........... . ..+| ...+-.+|
T Consensus 184 ~~~-~~~p---~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~---~l~~~~~~~~~-~-----~~~pdgi~~d~~G 250 (305)
T 3dr2_A 184 MAD-LDHP---NGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDG---ALHDRRHFASV-P-----DGLPDGFCVDRGG 250 (305)
T ss_dssp EEE-ESSE---EEEEECTTSSEEEEEECCC---CCCEEEEEEEETT---EEEEEEEEECC-S-----SSCCCSEEECTTS
T ss_pred Eec-CCCC---cceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCC---CccCCeEEEEC-C-----CCCCCeEEECCCC
Confidence 431 3222 2345556887 66654321 1345555 3221 11100001000 0 0122 23455789
Q ss_pred cEEEEEcCeeEEEeccCCeE
Q 048017 245 NLFIFANRRSILFDYINNKL 264 (566)
Q Consensus 245 ~Ifv~Gg~~~e~yDp~t~~W 264 (566)
+||+..+....+||+.....
T Consensus 251 ~lwv~~~~gv~~~~~~g~~~ 270 (305)
T 3dr2_A 251 WLWSSSGTGVCVFDSDGQLL 270 (305)
T ss_dssp CEEECCSSEEEEECTTSCEE
T ss_pred CEEEecCCcEEEECCCCCEE
Confidence 99987767788999965543
No 179
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=73.30 E-value=71 Score=31.10 Aligned_cols=70 Identities=4% Similarity=-0.009 Sum_probs=44.1
Q ss_pred EecCCcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEE--cCeeEEEeccCCe
Q 048017 187 ILPDNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFA--NRRSILFDYINNK 263 (566)
Q Consensus 187 ~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~G--g~~~e~yDp~t~~ 263 (566)
.+.++++|+..|..+. +..+ +++. ..-... +.. ..|.......+++||+.. +..+.+||+++.+
T Consensus 61 ~~~~~~Ly~stG~~g~-v~~iD~~Tg--kv~~~~--l~~--------~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~ 127 (268)
T 3nok_A 61 VFHQGHFFESTGHQGT-LRQLSLESA--QPVWME--RLG--------NIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQ 127 (268)
T ss_dssp EEETTEEEEEETTTTE-EEECCSSCS--SCSEEE--ECT--------TCCEEEEEECSSCEEEEESSSCEEEEEETTTTE
T ss_pred EEECCEEEEEcCCCCE-EEEEECCCC--cEEeEE--CCC--------CcceeEEEEeCCEEEEEEccCCEEEEEECCcCc
Confidence 3447899999997654 5556 6553 111122 211 234444555678999987 4568899999988
Q ss_pred EEEeec
Q 048017 264 LVKEFP 269 (566)
Q Consensus 264 W~~~~p 269 (566)
....++
T Consensus 128 ~~~ti~ 133 (268)
T 3nok_A 128 RERTTR 133 (268)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 776554
No 180
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=73.21 E-value=12 Score=36.15 Aligned_cols=86 Identities=15% Similarity=-0.007 Sum_probs=46.3
Q ss_pred eEEEEECCCCcEEeC-cCCC-----cccccCCeecCCCcEEEEcCCC---------CCCCeEEEEcCCCCCCCcccccCc
Q 048017 110 HSVLYDIASNTFRPL-LLQT-----DTWCSSGAVLSDGTLVQTGGYN---------VGDRVIRLFTPCNDEGCDWVELSK 174 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l-~~~~-----~~~c~~~~~l~dG~l~vvGG~~---------~g~~~v~~ydP~~~~t~~W~~~~~ 174 (566)
.+.+||+.+++.... .... .....+.++.+||+.+++++.. .....+.+||.. +.+-.+.-.
T Consensus 66 ~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~---~~~~~~~~~ 142 (349)
T 1jmx_B 66 DIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTA---DGLEAKPVR 142 (349)
T ss_dssp EEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGG---GGGGBCCSE
T ss_pred cEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECC---Cccccceee
Confidence 477899988876532 2111 1112344566799877776632 113578999987 433222111
Q ss_pred ccccccCcceEEEecCCcEEEEcC
Q 048017 175 NLWDRRWYASNQILPDNRIIVVGG 198 (566)
Q Consensus 175 ~M~~~R~y~s~~~L~dG~VyvvGG 198 (566)
....++.-.+.+.-+||++|+.++
T Consensus 143 ~~~~~~~~~~~~~s~dg~l~~~~~ 166 (349)
T 1jmx_B 143 TFPMPRQVYLMRAADDGSLYVAGP 166 (349)
T ss_dssp EEECCSSCCCEEECTTSCEEEESS
T ss_pred eccCCCcccceeECCCCcEEEccC
Confidence 123334333444557999877543
No 181
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=72.49 E-value=88 Score=31.84 Aligned_cols=112 Identities=11% Similarity=0.021 Sum_probs=56.8
Q ss_pred CeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEecCCc-EEEEcCccCCeEEEE-eCCCC
Q 048017 135 GAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILPDNR-IIVVGGRRVFTYEFY-PKIDS 212 (566)
Q Consensus 135 ~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~dG~-VyvvGG~~~~s~E~y-P~~~~ 212 (566)
-++-.+|+||++... ...+++||+. +++-..... . ..+ -+ .+.-++|+ +|+........+..+ +...
T Consensus 136 la~d~~g~lyv~d~~---~~~I~~id~~---~g~~~~~~~-~-~~~-~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~- 204 (409)
T 3hrp_A 136 IAAVGNNTVLAYQRD---DPRVRLISVD---DNKVTTVHP-G-FKG-GK-PAVTKDKQRVYSIGWEGTHTVYVYMKASG- 204 (409)
T ss_dssp EEECSTTEEEEEETT---TTEEEEEETT---TTEEEEEEE-T-CCB-CB-CEECTTSSEEEEEBSSTTCEEEEEEGGGT-
T ss_pred EEEeCCCCEEEEecC---CCcEEEEECC---CCEEEEeec-c-CCC-Cc-eeEecCCCcEEEEecCCCceEEEEEcCCC-
Confidence 344478999998653 3689999998 554433322 1 111 11 44455665 555443222244445 4332
Q ss_pred CCCeeee-ccccccCCCCCCCCccce-EEEec-CCcEEEEEcC-eeEEEeccCCeEE
Q 048017 213 LSSSLYL-RFLIETRDPGEENNLYPF-LHLLP-DGNLFIFANR-RSILFDYINNKLV 265 (566)
Q Consensus 213 ~~~w~~~-p~l~~~~d~~~~~~~yp~-~~~l~-~G~Ifv~Gg~-~~e~yDp~t~~W~ 265 (566)
...... ...... ..+|. +.+.+ +|+||+.... ...+||+.+....
T Consensus 205 -~~~~~~g~~~~~~-------~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~ 253 (409)
T 3hrp_A 205 -WAPTRIGQLGSTF-------SGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVT 253 (409)
T ss_dssp -TCEEEEEECCTTS-------CSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEE
T ss_pred -ceeEEeeeccchh-------cCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEE
Confidence 011122 000000 11222 34456 7899985433 4778999887654
No 182
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=72.27 E-value=49 Score=30.32 Aligned_cols=91 Identities=15% Similarity=0.114 Sum_probs=52.7
Q ss_pred eEEEEECCC-CcEEeCcCCCc-ccccCCeecCCCcEEEEcCCC-CCCCeEEEEcCCCCCCCcccccCcccccccCcceEE
Q 048017 110 HSVLYDIAS-NTFRPLLLQTD-TWCSSGAVLSDGTLVQTGGYN-VGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQ 186 (566)
Q Consensus 110 ~~~~yDp~t-~~w~~l~~~~~-~~c~~~~~l~dG~l~vvGG~~-~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~ 186 (566)
.+.+||..+ ++...+..... .........+||+.+++++.. ++...+..+|.. +.+...+.. .. . .....
T Consensus 63 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~---~~~~~~~~~-~~--~-~~~~~ 135 (297)
T 2ojh_A 63 LLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPST---GGTPRLMTK-NL--P-SYWHG 135 (297)
T ss_dssp EEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETT---CCCCEECCS-SS--S-EEEEE
T ss_pred eEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECC---CCceEEeec-CC--C-ccceE
Confidence 367899998 87776654332 233345667899988887743 345678888876 444333322 11 1 22334
Q ss_pred EecCCcEEEEcCccCCeEEEE
Q 048017 187 ILPDNRIIVVGGRRVFTYEFY 207 (566)
Q Consensus 187 ~L~dG~VyvvGG~~~~s~E~y 207 (566)
.-+||+.+++.+.......+|
T Consensus 136 ~spdg~~l~~~~~~~~~~~l~ 156 (297)
T 2ojh_A 136 WSPDGKSFTYCGIRDQVFDIY 156 (297)
T ss_dssp ECTTSSEEEEEEEETTEEEEE
T ss_pred ECCCCCEEEEEECCCCceEEE
Confidence 456888666444333445565
No 183
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=71.30 E-value=1.3e+02 Score=33.28 Aligned_cols=138 Identities=11% Similarity=0.013 Sum_probs=73.9
Q ss_pred EEEEECCCCcEEeCcCCC-----cccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCc--ccccccCcc
Q 048017 111 SVLYDIASNTFRPLLLQT-----DTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSK--NLWDRRWYA 183 (566)
Q Consensus 111 ~~~yDp~t~~w~~l~~~~-----~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~--~M~~~R~y~ 183 (566)
..+||+.+++|+...... .....+...-.+|+|++..- . ..+.+||+. +.+++.... .++... -.
T Consensus 471 l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~---~Gl~~~~~~---~~~~~~~~~~~~l~~~~-i~ 542 (781)
T 3v9f_A 471 VFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTF-G---GGVGIYTPD---MQLVRKFNQYEGFCSNT-IN 542 (781)
T ss_dssp EEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEES-S---SCEEEECTT---CCEEEEECTTTTCSCSC-EE
T ss_pred eEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEc-C---CCEEEEeCC---CCeEEEccCCCCCCCCe-eE
Confidence 678999998887654221 12222233445788887532 1 237789998 666665432 132222 12
Q ss_pred eEEEecCCcEEEEcCccCCeE-EEE-eCCCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEcCeeEEEeccC
Q 048017 184 SNQILPDNRIIVVGGRRVFTY-EFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANRRSILFDYIN 261 (566)
Q Consensus 184 s~~~L~dG~VyvvGG~~~~s~-E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~~~e~yDp~t 261 (566)
+...-.+|+|++... ... -+| |.++ ......... . ...+..-....-.+|+|++.+.+...+|||++
T Consensus 543 ~i~~d~~g~lWi~T~---~Glv~~~d~~~~---~~~~~~~~~---g--l~~~~i~~i~~d~~g~lW~~t~~Gl~~~~~~~ 611 (781)
T 3v9f_A 543 QIYRSSKGQMWLATG---EGLVCFPSARNF---DYQVFQRKE---G--LPNTHIRAISEDKNGNIWASTNTGISCYITSK 611 (781)
T ss_dssp EEEECTTSCEEEEET---TEEEEESCTTTC---CCEEECGGG---T--CSCCCCCEEEECSSSCEEEECSSCEEEEETTT
T ss_pred EEEECCCCCEEEEEC---CCceEEECCCCC---cEEEccccC---C--CCCceEEEEEECCCCCEEEEcCCceEEEECCC
Confidence 333335788887532 123 455 5442 232221100 0 01111223333457999988888889999999
Q ss_pred CeEEEee
Q 048017 262 NKLVKEF 268 (566)
Q Consensus 262 ~~W~~~~ 268 (566)
.++. ..
T Consensus 612 ~~~~-~~ 617 (781)
T 3v9f_A 612 KCFY-TY 617 (781)
T ss_dssp TEEE-EE
T ss_pred CceE-Ee
Confidence 9876 44
No 184
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=70.50 E-value=1.3e+02 Score=32.94 Aligned_cols=80 Identities=11% Similarity=0.102 Sum_probs=41.0
Q ss_pred EEEEECCCCc--EEeCcCCC-----ccccc---CCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCccccccc
Q 048017 111 SVLYDIASNT--FRPLLLQT-----DTWCS---SGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRR 180 (566)
Q Consensus 111 ~~~yDp~t~~--w~~l~~~~-----~~~c~---~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R 180 (566)
+..+|.+|++ |+.-.... ...|. .+..+.+++||+.... ..+..+|..+. ...|+.... -....
T Consensus 78 v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d----g~l~alD~~tG-~~~W~~~~~-~~~~~ 151 (668)
T 1kv9_A 78 VIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLD----GRLIALDAKTG-KAIWSQQTT-DPAKP 151 (668)
T ss_dssp EEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTT----SEEEEEETTTC-CEEEEEECS-CTTSS
T ss_pred EEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCC----CEEEEEECCCC-CEeeeeccC-CCCCc
Confidence 5677887765 76543211 12231 2344557777775432 46888998732 345875321 01111
Q ss_pred Cc-ceEEEecCCcEEEE
Q 048017 181 WY-ASNQILPDNRIIVV 196 (566)
Q Consensus 181 ~y-~s~~~L~dG~Vyvv 196 (566)
+. .+..++.+|+||+.
T Consensus 152 ~~~~~~P~v~~~~v~vg 168 (668)
T 1kv9_A 152 YSITGAPRVVKGKVIIG 168 (668)
T ss_dssp CBCCSCCEEETTEEEEC
T ss_pred ceecCCCEEECCEEEEe
Confidence 11 12223348888874
No 185
>3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A*
Probab=67.64 E-value=55 Score=33.13 Aligned_cols=84 Identities=15% Similarity=0.175 Sum_probs=43.8
Q ss_pred eEEEEeeCCCCCeEEe-c-----cCCCc-----ccceeEEccCCeEEEEcCCCCCCCCCc------cccCcCCcEEeccC
Q 048017 336 CGRLKVTDKYPVWSME-F-----MPMPR-----VMSDMLLLPSGDVIIINGASNGTAGWE------DAEEPDRRFVVLNP 398 (566)
Q Consensus 336 ~~~~d~~~~~~~W~~~-~-----M~~~R-----~~~~~vvLpdG~V~vvGG~~~g~~~~~------~~ydPt~~Wt~~~~ 398 (566)
+..+.-.+...+|+.. . ++.++ .+...+.+.+|+|++.-....+..... ...| +.+|+....
T Consensus 116 ~~v~~S~D~G~TW~~~~~i~~~~~~~~~~g~~~v~eP~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~S~D-G~TWs~~~~ 194 (355)
T 3a72_A 116 IVLYASQDDGMTWDFVSHIAAGGEARPNNGLTPVWEPFLLANKGKLICYYSDQRDNATYGQTMVHQVTND-LKNWGPVVE 194 (355)
T ss_dssp EEEEEESSTTSCCEEEEEEEEESCSSCCTTCCCEEEEEEEEETTEEEEEEEECCCTTTCSCEEEEEEESS-SSSCCCCEE
T ss_pred EEEEEECCCCccCccCccccccCccccccCCCccccceEEccCCeEEEEECCCCCCCCCCcEEEEEECCC-CCCCCCCee
Confidence 3344445567889864 3 22221 211245678999888753221100011 1235 889976443
Q ss_pred CC-----CCCcceeEEEEcCCCcEEEe
Q 048017 399 SK-----IPRMYHSSAVVLPDGRILVG 420 (566)
Q Consensus 399 ~~-----~~R~yhs~a~LlpdG~V~v~ 420 (566)
.. ..|.....++-|+||+++++
T Consensus 195 ~~~~~~~~~rpg~p~v~~l~dG~l~l~ 221 (355)
T 3a72_A 195 DVTYPTYTDRPGMPVVTKLPNGQYFYV 221 (355)
T ss_dssp EECCSSTTCEEEEEEEEECTTSCEEEE
T ss_pred ccccCccCCCCCceEEEECCCCCEEEE
Confidence 21 12333335667999998765
No 186
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=67.20 E-value=55 Score=35.16 Aligned_cols=90 Identities=18% Similarity=0.193 Sum_probs=49.9
Q ss_pred eEEEEECCCCcEEeCcCCCccc-----c---cCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccC
Q 048017 110 HSVLYDIASNTFRPLLLQTDTW-----C---SSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRW 181 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~~~~-----c---~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~ 181 (566)
....+|+++++++.+....... . ...++.++|++++.+.. +...+..+|.. +.+.+.+.. . ...
T Consensus 266 ~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~d~~---~~~~~~l~~--~-~~~ 337 (662)
T 3azo_A 266 NLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK--GAAVLGILDPE---SGELVDAAG--P-WTE 337 (662)
T ss_dssp EEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS--SSCEEEEEETT---TTEEEECCS--S-CCE
T ss_pred EEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc--CccEEEEEECC---CCcEEEecC--C-CCe
Confidence 5778898899998876532211 1 12233468998888764 56677777887 555554432 1 111
Q ss_pred cceEEEecCCcEEEEcCccCCeEEEE
Q 048017 182 YASNQILPDNRIIVVGGRRVFTYEFY 207 (566)
Q Consensus 182 y~s~~~L~dG~VyvvGG~~~~s~E~y 207 (566)
........+++++++.+......++|
T Consensus 338 ~~~~~s~~~~~~~~~~~~~~~~~~i~ 363 (662)
T 3azo_A 338 WAATLTVSGTRAVGVAASPRTAYEVV 363 (662)
T ss_dssp EEEEEEEETTEEEEEEEETTEEEEEE
T ss_pred EEEEEecCCCEEEEEEcCCCCCCEEE
Confidence 22221333455666655544344455
No 187
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=66.86 E-value=1.1e+02 Score=30.96 Aligned_cols=60 Identities=10% Similarity=0.039 Sum_probs=31.8
Q ss_pred CeecCCCcEEEEcCCCC-----CCCeEEEEcCCCCCCCcccccCcccccccCcceEEEecCCcEEEEcC
Q 048017 135 GAVLSDGTLVQTGGYNV-----GDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILPDNRIIVVGG 198 (566)
Q Consensus 135 ~~~l~dG~l~vvGG~~~-----g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyvvGG 198 (566)
.+...+|+||..|-... +........|.. -.....+.. +... ++|+++...||+||..|-
T Consensus 37 ~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~--v~~l~~v~~-va~G-~~h~~~l~~~G~v~~wG~ 101 (423)
T 3mvd_K 37 KRRTVLGNVLVCGNGDVGQLGLGEDILERKRLSP--VAGIPDAVD-ISAG-GMHNLVLTKSGDIYSFGC 101 (423)
T ss_dssp CCCCCCEEEEEEEECTTSTTCSCSSCCEEEEEEE--CCSCSSEEE-EEEC-SSEEEEEETTSCEEEEEC
T ss_pred eeecCCCcEEEEeCCCCCCCCCCCCCccCcCCeE--ccCCCCceE-EeeC-CCeEEEEeCCCeEEEeEC
Confidence 44556899999984332 111111122210 001111112 3334 468888888999999985
No 188
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=65.55 E-value=62 Score=31.53 Aligned_cols=106 Identities=15% Similarity=0.207 Sum_probs=53.5
Q ss_pred ecC-CCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEec---CCcEEEEcCccCCeEEEE-eCCC
Q 048017 137 VLS-DGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILP---DNRIIVVGGRRVFTYEFY-PKID 211 (566)
Q Consensus 137 ~l~-dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~---dG~VyvvGG~~~~s~E~y-P~~~ 211 (566)
..+ ++.++++|+.+ ..+.+||.. +.+-... +.....-.+....+ ++.++++|+.++ .+.+| ..+.
T Consensus 107 ~~~~~~~~l~s~~~d---~~i~iwd~~---~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~d~~~~ 176 (408)
T 4a11_B 107 WYPHDTGMFTSSSFD---KTLKVWDTN---TLQTADV---FNFEETVYSHHMSPVSTKHCLVAVGTRGP-KVQLCDLKSG 176 (408)
T ss_dssp ECTTCTTCEEEEETT---SEEEEEETT---TTEEEEE---EECSSCEEEEEECSSCSSCCEEEEEESSS-SEEEEESSSS
T ss_pred EccCCCcEEEEEeCC---CeEEEeeCC---CCcccee---ccCCCceeeeEeecCCCCCcEEEEEcCCC-eEEEEeCCCc
Confidence 445 67788888754 578999987 4332221 22222222233333 455888877654 45566 3321
Q ss_pred CCCCeeeeccccccCCCCCCCCccceEEEecCCc-EEEEEcC--eeEEEeccCCe
Q 048017 212 SLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGN-LFIFANR--RSILFDYINNK 263 (566)
Q Consensus 212 ~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~-Ifv~Gg~--~~e~yDp~t~~ 263 (566)
..-.... ... ..--.+...++++ +++.|+. ...+||..+..
T Consensus 177 --~~~~~~~---~~~------~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~ 220 (408)
T 4a11_B 177 --SCSHILQ---GHR------QEILAVSWSPRYDYILATASADSRVKLWDVRRAS 220 (408)
T ss_dssp --CCCEEEC---CCC------SCEEEEEECSSCTTEEEEEETTSCEEEEETTCSS
T ss_pred --ceeeeec---CCC------CcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCC
Confidence 0111111 000 0011223456777 7877775 46788887653
No 189
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=64.74 E-value=1.2e+02 Score=30.21 Aligned_cols=121 Identities=7% Similarity=0.023 Sum_probs=62.8
Q ss_pred CeecCCC-cEEEEcCCCCCCCeEEEEcCCCCCCCcccc--cCccccccc-------------CcceEEEecCCcEEEEcC
Q 048017 135 GAVLSDG-TLVQTGGYNVGDRVIRLFTPCNDEGCDWVE--LSKNLWDRR-------------WYASNQILPDNRIIVVGG 198 (566)
Q Consensus 135 ~~~l~dG-~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~--~~~~M~~~R-------------~y~s~~~L~dG~VyvvGG 198 (566)
....++| +++++|+.+ ..+++||.. +.+... ... +.... .-.+++.-+||+.++.|+
T Consensus 232 ~~~~p~~~~~l~s~~~d---g~i~iwd~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~ 304 (447)
T 3dw8_B 232 AEFHPNSCNTFVYSSSK---GTIRLCDMR---ASALCDRHSKL-FEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRD 304 (447)
T ss_dssp EEECSSCTTEEEEEETT---SCEEEEETT---TCSSSCTTCEE-ECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEE
T ss_pred EEECCCCCcEEEEEeCC---CeEEEEECc---CCccccceeeE-eccCCCccccccccccCceEEEEEECCCCCEEEEee
Confidence 4455787 899998864 578999987 433210 111 21111 233455567899988887
Q ss_pred ccCCeEEEE-eCCCCCCCeeeeccccccCCC----CCCCCccc--eEEEecCCcEEEEEcC--eeEEEeccCCeEE
Q 048017 199 RRVFTYEFY-PKIDSLSSSLYLRFLIETRDP----GEENNLYP--FLHLLPDGNLFIFANR--RSILFDYINNKLV 265 (566)
Q Consensus 199 ~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~----~~~~~~yp--~~~~l~~G~Ifv~Gg~--~~e~yDp~t~~W~ 265 (566)
. ..+.+| .... .........-...... ......+. .+...++|+.++.|+. ...+||..+++..
T Consensus 305 ~--~~v~iwd~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~ 377 (447)
T 3dw8_B 305 Y--LSVKVWDLNME-NRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDI 377 (447)
T ss_dssp S--SEEEEEETTCC-SSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEE
T ss_pred C--CeEEEEeCCCC-ccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcce
Confidence 6 567777 3321 0001111100000000 00000000 1345689998888875 4678999988765
No 190
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=64.08 E-value=1.8e+02 Score=32.19 Aligned_cols=136 Identities=15% Similarity=0.070 Sum_probs=72.5
Q ss_pred EEEEECCCCcEEeCcCC------CcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccC-----cccccc
Q 048017 111 SVLYDIASNTFRPLLLQ------TDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELS-----KNLWDR 179 (566)
Q Consensus 111 ~~~yDp~t~~w~~l~~~------~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~-----~~M~~~ 179 (566)
..+||+++++|+..... ...+......-.+|+|++... ..+.+||+. +.++ ... ..++..
T Consensus 473 l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-----~Gl~~~~~~---~~~~-~~~~~~~~~~l~~~ 543 (795)
T 4a2l_A 473 LVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-----EGLSVFKQE---GLDI-QKASILPVSNVTKL 543 (795)
T ss_dssp EEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-----SCEEEEEEE---TTEE-EECCCSCSCGGGGS
T ss_pred eeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-----CceEEEeCC---CCeE-EEecCCCCCCCCCC
Confidence 67899999999877532 111111223345788888643 237778887 5665 221 112221
Q ss_pred cCcceEEEecCCcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEcCeeEEEe
Q 048017 180 RWYASNQILPDNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANRRSILFD 258 (566)
Q Consensus 180 R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~~~e~yD 258 (566)
.-.+.+.-.+|++++... . ..-+| |.++ ......... . .+.+..-....-.+|+|++.+.+...+||
T Consensus 544 -~i~~i~~d~~g~lWigT~-~--Gl~~~d~~~~---~~~~~~~~~---g--l~~~~i~~i~~d~~g~lWi~t~~Gl~~~~ 611 (795)
T 4a2l_A 544 -FTNCIYEASNGIIWVGTR-E--GFYCFNEKDK---QIKRYNTTN---G--LPNNVVYGILEDSFGRLWLSTNRGISCFN 611 (795)
T ss_dssp -CEEEEEECTTSCEEEEES-S--CEEEEETTTT---EEEEECGGG---T--CSCSCEEEEEECTTSCEEEEETTEEEEEE
T ss_pred -eeEEEEECCCCCEEEEeC-C--CceeECCCCC---cEEEeCCCC---C--CchhheEEEEECCCCCEEEEcCCceEEEc
Confidence 222333335789887432 2 23445 5432 222211100 0 01111112222347999988888889999
Q ss_pred ccCCeEEEee
Q 048017 259 YINNKLVKEF 268 (566)
Q Consensus 259 p~t~~W~~~~ 268 (566)
|+++++. .+
T Consensus 612 ~~~~~~~-~~ 620 (795)
T 4a2l_A 612 PETEKFR-NF 620 (795)
T ss_dssp TTTTEEE-EE
T ss_pred CCCCcEE-Ec
Confidence 9999876 34
No 191
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=63.87 E-value=46 Score=33.78 Aligned_cols=63 Identities=14% Similarity=0.131 Sum_probs=36.3
Q ss_pred cceeEEccCCeEEEEcCCCCCCCCCc---cccCc-------CCcEEeccCCCCCCcceeEEEEcCCCcEEEecCCCCc
Q 048017 359 MSDMLLLPSGDVIIINGASNGTAGWE---DAEEP-------DRRFVVLNPSKIPRMYHSSAVVLPDGRILVGGSNPHR 426 (566)
Q Consensus 359 ~~~~vvLpdG~V~vvGG~~~g~~~~~---~~ydP-------t~~Wt~~~~~~~~R~yhs~a~LlpdG~V~v~GG~~~~ 426 (566)
.|..++.-||+||..|-...|.-+.. ....| ..+...++ .-.+|+. +|..||+||.-|.+..+
T Consensus 223 ~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~----~G~~hs~-alt~~G~v~~wG~n~~G 295 (389)
T 3kci_A 223 AQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVE----CGSQFSV-ALTKSGAVYTWGKGDYH 295 (389)
T ss_dssp CEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEE----EETTEEE-EEETTSCEEEEECCGGG
T ss_pred cEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEe----CCCCEEE-EEeCCCeEEEEeCCCCC
Confidence 45667778999999996543322211 11222 11222221 1245654 45689999999987654
No 192
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=63.80 E-value=1.7e+02 Score=31.79 Aligned_cols=117 Identities=13% Similarity=0.019 Sum_probs=66.8
Q ss_pred EEEEeeCCeEEEEeccCCCCCCCCCCCCccccCCCCCCCcccceEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEE
Q 048017 67 HMQVLNNDKVIIFDRTDMGPSNLSLPIDKCRKEGDVGQLDCTAHSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQT 146 (566)
Q Consensus 67 h~~~l~~gkV~~~gg~~~~~s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vv 146 (566)
.....+|||.+++.....|.. ...+.++|.++++...............+..+||+.++.
T Consensus 125 ~~~~SPDG~~la~~~~~~G~~--------------------~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~ 184 (695)
T 2bkl_A 125 TWAVSWDGKKVAFAQKPNAAD--------------------EAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYY 184 (695)
T ss_dssp EEEECTTSSEEEEEEEETTCS--------------------CCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEE
T ss_pred EEEECCCCCEEEEEECCCCCc--------------------eEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEE
Confidence 344457999888765432110 135788999999875111122221245677789998777
Q ss_pred cCCCCC----------CCeEEEEcCCCCCCCccc--ccCcccc-cccCcceEEEecCCcEEEEcCccC-CeEEEE
Q 048017 147 GGYNVG----------DRVIRLFTPCNDEGCDWV--ELSKNLW-DRRWYASNQILPDNRIIVVGGRRV-FTYEFY 207 (566)
Q Consensus 147 GG~~~g----------~~~v~~ydP~~~~t~~W~--~~~~~M~-~~R~y~s~~~L~dG~VyvvGG~~~-~s~E~y 207 (566)
+..... ...+++++.. +..-. .+-. .. ...+..+...-+||+.+++..... ...++|
T Consensus 185 ~~~d~~~~~~~~~~~~~~~v~~~~l~---t~~~~~~lv~~-~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~ 255 (695)
T 2bkl_A 185 EWLPTDPSIKVDERPGYTTIRYHTLG---TEPSKDTVVHE-RTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVY 255 (695)
T ss_dssp EECCCCTTSCGGGGGGGCEEEEEETT---SCGGGCEEEEC-CCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEE
T ss_pred EEecCCCCCccccCCCCCEEEEEECC---CCchhceEEEe-cCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEE
Confidence 654321 3458888877 43321 1111 11 224555666667998777776554 455666
No 193
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=62.28 E-value=1.9e+02 Score=31.94 Aligned_cols=252 Identities=12% Similarity=0.051 Sum_probs=118.4
Q ss_pred eEEEEECCCCcEEeCcCCC--------cccccCCeecCCCc-EEEEcCCCCCCCeEEEEcCCCCCCCcccccCc---ccc
Q 048017 110 HSVLYDIASNTFRPLLLQT--------DTWCSSGAVLSDGT-LVQTGGYNVGDRVIRLFTPCNDEGCDWVELSK---NLW 177 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~--------~~~c~~~~~l~dG~-l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~---~M~ 177 (566)
-..+||+.+++++...... .....+...-.+|+ |++ |... ..+.+||+. +.++..... .+.
T Consensus 378 Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWi-gt~~---~Gl~~~d~~---~~~~~~~~~~~~~l~ 450 (795)
T 4a2l_A 378 GLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYI-GTHA---GGLSILHRN---SGQVENFNQRNSQLV 450 (795)
T ss_dssp CEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEE-EETT---TEEEEEETT---TCCEEEECTTTSCCS
T ss_pred CeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEE-EeCc---CceeEEeCC---CCcEEEeecCCCCcC
Confidence 4667888888887654211 11111112234788 665 3322 347889988 666654432 011
Q ss_pred cccCcceEEEecCCcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEcCeeEE
Q 048017 178 DRRWYASNQILPDNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANRRSIL 256 (566)
Q Consensus 178 ~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~~~e~ 256 (566)
..+ -.+...-.+|++++-.. . ..-+| |.+. .+........... .....--....-.+|+|++.......+
T Consensus 451 ~~~-v~~i~~d~~g~lwigt~-~--Gl~~~~~~~~---~~~~~~~~~~~~~--~~~~~i~~i~~d~~g~lWigt~~Gl~~ 521 (795)
T 4a2l_A 451 NEN-VYAILPDGEGNLWLGTL-S--ALVRFNPEQR---SFTTIEKEKDGTP--VVSKQITTLFRDSHKRLWIGGEEGLSV 521 (795)
T ss_dssp CSC-EEEEEECSSSCEEEEES-S--CEEEEETTTT---EEEECCBCTTCCB--CCCCCEEEEEECTTCCEEEEESSCEEE
T ss_pred CCe-eEEEEECCCCCEEEEec-C--ceeEEeCCCC---eEEEccccccccc--cCCceEEEEEECCCCCEEEEeCCceEE
Confidence 111 12333344688887543 2 23455 5542 3332211100000 000111122233578888876656788
Q ss_pred EeccCCeEEEeecccCCCCCCccCCCCceeeecccccCCCCCCCCCCCCCCEEEEEcCCCCCccccccccccccccCCee
Q 048017 257 FDYINNKLVKEFPVIPGNDKRNYPSTGSSILLPVKLSAGSDGNGTAALPDAEVMVCGGAPAGAFIKSDKESVYVEASRTC 336 (566)
Q Consensus 257 yDp~t~~W~~~~p~lp~~~~r~~~~~g~avllpl~~~~~~~~~~y~~~~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~ 336 (566)
||++++++ . +...... ...+......++. .. +|+|++.... + +
T Consensus 522 ~~~~~~~~-~-~~~~~~~--~~l~~~~i~~i~~-----------d~---~g~lWigT~~--G-----------------l 564 (795)
T 4a2l_A 522 FKQEGLDI-Q-KASILPV--SNVTKLFTNCIYE-----------AS---NGIIWVGTRE--G-----------------F 564 (795)
T ss_dssp EEEETTEE-E-ECCCSCS--CGGGGSCEEEEEE-----------CT---TSCEEEEESS--C-----------------E
T ss_pred EeCCCCeE-E-EecCCCC--CCCCCCeeEEEEE-----------CC---CCCEEEEeCC--C-----------------c
Confidence 99999887 3 2210000 0011001111211 01 6777764321 1 2
Q ss_pred EEEEeeCCCCCeEE---e-ccCCCcccceeEEccCCeEEEEcCCCCCCCCCccccCc-CCcEEeccC---CCCCCcceeE
Q 048017 337 GRLKVTDKYPVWSM---E-FMPMPRVMSDMLLLPSGDVIIINGASNGTAGWEDAEEP-DRRFVVLNP---SKIPRMYHSS 408 (566)
Q Consensus 337 ~~~d~~~~~~~W~~---~-~M~~~R~~~~~vvLpdG~V~vvGG~~~g~~~~~~~ydP-t~~Wt~~~~---~~~~R~yhs~ 408 (566)
.+||+. +.+++. . .|+..... +.+.-.+|+|++... .| ..+||| +.+++.... ++.......+
T Consensus 565 ~~~d~~--~~~~~~~~~~~gl~~~~i~-~i~~d~~g~lWi~t~--~G----l~~~~~~~~~~~~~~~~dGl~~~~f~~~~ 635 (795)
T 4a2l_A 565 YCFNEK--DKQIKRYNTTNGLPNNVVY-GILEDSFGRLWLSTN--RG----ISCFNPETEKFRNFTESDGLQSNQFNTAS 635 (795)
T ss_dssp EEEETT--TTEEEEECGGGTCSCSCEE-EEEECTTSCEEEEET--TE----EEEEETTTTEEEEECGGGTCSCSCEEEEE
T ss_pred eeECCC--CCcEEEeCCCCCCchhheE-EEEECCCCCEEEEcC--Cc----eEEEcCCCCcEEEcCCcCCCccccCccCc
Confidence 334432 123332 1 34443332 323345788888653 23 346899 777776432 3333333345
Q ss_pred EEEcCCCcEEEecCC
Q 048017 409 AVVLPDGRILVGGSN 423 (566)
Q Consensus 409 a~LlpdG~V~v~GG~ 423 (566)
++..+||++|++|.+
T Consensus 636 ~~~~~~G~l~~g~~~ 650 (795)
T 4a2l_A 636 YCRTSVGQMYFGGIN 650 (795)
T ss_dssp EEECTTSCEEEEETT
T ss_pred eeECCCCeEEEecCC
Confidence 667799999987764
No 194
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=61.04 E-value=58 Score=30.39 Aligned_cols=86 Identities=13% Similarity=0.188 Sum_probs=45.2
Q ss_pred eEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCccccccc-CcceEEEe
Q 048017 110 HSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRR-WYASNQIL 188 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R-~y~s~~~L 188 (566)
.+.+||..+.+-...-..+..........++|+ +++|+.+ ..+++||.. +.+.... +.... .-.+.+..
T Consensus 206 ~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-l~~~~~d---g~v~iwd~~---~~~~~~~---~~~~~~~i~~~~~~ 275 (313)
T 3odt_A 206 LIKLVDMHTGDVLRTYEGHESFVYCIKLLPNGD-IVSCGED---RTVRIWSKE---NGSLKQV---ITLPAISIWSVDCM 275 (313)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECTTSC-EEEEETT---SEEEEECTT---TCCEEEE---EECSSSCEEEEEEC
T ss_pred eEEEEECCchhhhhhhhcCCceEEEEEEecCCC-EEEEecC---CEEEEEECC---CCceeEE---EeccCceEEEEEEc
Confidence 477888887654322222222223344556886 4555543 579999987 4433221 22221 22345556
Q ss_pred cCCcEEEEcCccCCeEEEE
Q 048017 189 PDNRIIVVGGRRVFTYEFY 207 (566)
Q Consensus 189 ~dG~VyvvGG~~~~s~E~y 207 (566)
+||++ ++|+.++ .+.+|
T Consensus 276 ~~~~~-~~~~~dg-~i~iw 292 (313)
T 3odt_A 276 SNGDI-IVGSSDN-LVRIF 292 (313)
T ss_dssp TTSCE-EEEETTS-CEEEE
T ss_pred cCCCE-EEEeCCC-cEEEE
Confidence 78884 4566543 45555
No 195
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=60.96 E-value=97 Score=29.68 Aligned_cols=100 Identities=15% Similarity=0.065 Sum_probs=52.5
Q ss_pred eeEEEEeeCCeEEEEeccCCCCCCCCCCCCccccCCCCCCCcccceEEEEECCCCcEEeCcCCCcccccCCeecCCCcEE
Q 048017 65 AMHMQVLNNDKVIIFDRTDMGPSNLSLPIDKCRKEGDVGQLDCTAHSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLV 144 (566)
Q Consensus 65 a~h~~~l~~gkV~~~gg~~~~~s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~ 144 (566)
....++-++|+||+.+-.+ ..+..||+..+.-+..... ..-.+.++..+|++|
T Consensus 34 pegia~~~~g~lyv~d~~~-------------------------~~I~~~d~~g~~~~~~~~~--~~p~gia~~~dG~l~ 86 (306)
T 2p4o_A 34 LENLASAPDGTIFVTNHEV-------------------------GEIVSITPDGNQQIHATVE--GKVSGLAFTSNGDLV 86 (306)
T ss_dssp EEEEEECTTSCEEEEETTT-------------------------TEEEEECTTCCEEEEEECS--SEEEEEEECTTSCEE
T ss_pred cceEEECCCCCEEEEeCCC-------------------------CeEEEECCCCceEEEEeCC--CCceeEEEcCCCcEE
Confidence 3445555689999887421 1356777766432211111 112234455789998
Q ss_pred EEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEecCCcEEEE
Q 048017 145 QTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILPDNRIIVV 196 (566)
Q Consensus 145 vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~dG~Vyvv 196 (566)
++....+ ...+..||+. +.+.+.+.. ....|.-...+...++++|+.
T Consensus 87 vad~~~~-~~~v~~~d~~---~g~~~~~~~-~~~~~~~~g~~~~~~~~~~v~ 133 (306)
T 2p4o_A 87 ATGWNAD-SIPVVSLVKS---DGTVETLLT-LPDAIFLNGITPLSDTQYLTA 133 (306)
T ss_dssp EEEECTT-SCEEEEEECT---TSCEEEEEE-CTTCSCEEEEEESSSSEEEEE
T ss_pred EEeccCC-cceEEEEcCC---CCeEEEEEe-CCCccccCcccccCCCcEEEE
Confidence 8753211 2357778877 566655443 333343333444445555553
No 196
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=60.92 E-value=1.4e+02 Score=29.96 Aligned_cols=114 Identities=9% Similarity=-0.039 Sum_probs=54.4
Q ss_pred CeecCCCc-EEEEcCCCCCCCeEEEEcCCCCCCCcccccCc-ccc-cccCcceEEEec-CCcEEEEcCccCCeEEEE-eC
Q 048017 135 GAVLSDGT-LVQTGGYNVGDRVIRLFTPCNDEGCDWVELSK-NLW-DRRWYASNQILP-DNRIIVVGGRRVFTYEFY-PK 209 (566)
Q Consensus 135 ~~~l~dG~-l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~-~M~-~~R~y~s~~~L~-dG~VyvvGG~~~~s~E~y-P~ 209 (566)
....+++. ++++|+.+ ..+.+||........+...+. .+. ....-.+++..+ ++.+++.|+.+ ..+.+| ..
T Consensus 187 l~~~~~~~~~l~s~~~d---g~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d-g~i~i~d~~ 262 (430)
T 2xyi_A 187 LSWNPNLNGYLLSASDD---HTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADD-QKLMIWDTR 262 (430)
T ss_dssp EEECTTSTTEEEEECTT---SCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETT-SEEEEEETT
T ss_pred EEeCCCCCCeEEEEeCC---CeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCC-CeEEEEECC
Confidence 34456777 88888764 568899987210112211100 011 111122333344 67888888765 345566 33
Q ss_pred CCCCCCeeeeccccccCCCCCCCCccc-eEEEecCCc-EEEEEcC--eeEEEeccC
Q 048017 210 IDSLSSSLYLRFLIETRDPGEENNLYP-FLHLLPDGN-LFIFANR--RSILFDYIN 261 (566)
Q Consensus 210 ~~~~~~w~~~p~l~~~~d~~~~~~~yp-~~~~l~~G~-Ifv~Gg~--~~e~yDp~t 261 (566)
+. ........+.... ... .+...++++ +++.|+. ...+||..+
T Consensus 263 ~~--~~~~~~~~~~~~~-------~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~ 309 (430)
T 2xyi_A 263 NN--NTSKPSHTVDAHT-------AEVNCLSFNPYSEFILATGSADKTVALWDLRN 309 (430)
T ss_dssp CS--CSSSCSEEEECCS-------SCEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred CC--CCCcceeEeecCC-------CCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCC
Confidence 21 0011000011100 011 223345665 7888874 467889876
No 197
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=57.73 E-value=1.4e+02 Score=28.73 Aligned_cols=135 Identities=16% Similarity=0.109 Sum_probs=66.6
Q ss_pred EEEEECCCCcEEeCcCC----CcccccCCeecC-CCcEEEEcCCC--------------CCCCeEEEEcCCCCCCCcccc
Q 048017 111 SVLYDIASNTFRPLLLQ----TDTWCSSGAVLS-DGTLVQTGGYN--------------VGDRVIRLFTPCNDEGCDWVE 171 (566)
Q Consensus 111 ~~~yDp~t~~w~~l~~~----~~~~c~~~~~l~-dG~l~vvGG~~--------------~g~~~v~~ydP~~~~t~~W~~ 171 (566)
...||+.+++.+.+... ...+....++-. +|+||+.-... .....+.+||+. +.+...
T Consensus 103 i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~---~~~~~~ 179 (322)
T 2fp8_A 103 LSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPS---TKETTL 179 (322)
T ss_dssp EEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETT---TTEEEE
T ss_pred EEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCC---CCEEEE
Confidence 45677776655544321 112234456667 89999974210 112468889997 555443
Q ss_pred cCcccccccCcceEEEecCCc-EEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceE-EEecCCcEEE
Q 048017 172 LSKNLWDRRWYASNQILPDNR-IIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFL-HLLPDGNLFI 248 (566)
Q Consensus 172 ~~~~M~~~R~y~s~~~L~dG~-VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~-~~l~~G~Ifv 248 (566)
....+..+ ...+.-+||+ +||.--. ...+.+| .............-+ .. |.. .+-.+|+||+
T Consensus 180 ~~~~~~~p---~gia~~~dg~~lyv~d~~-~~~I~~~~~~~~~~~~~~~~~~~---------~g--P~gi~~d~~G~l~v 244 (322)
T 2fp8_A 180 LLKELHVP---GGAEVSADSSFVLVAEFL-SHQIVKYWLEGPKKGTAEVLVKI---------PN--PGNIKRNADGHFWV 244 (322)
T ss_dssp EEEEESCC---CEEEECTTSSEEEEEEGG-GTEEEEEESSSTTTTCEEEEEEC---------SS--EEEEEECTTSCEEE
T ss_pred eccCCccC---cceEECCCCCEEEEEeCC-CCeEEEEECCCCcCCccceEEeC---------CC--CCCeEECCCCCEEE
Confidence 32212222 2345555776 7765322 2345555 332100111111000 01 333 3446899998
Q ss_pred EEcC------------eeEEEeccCCe
Q 048017 249 FANR------------RSILFDYINNK 263 (566)
Q Consensus 249 ~Gg~------------~~e~yDp~t~~ 263 (566)
.... ...+||+....
T Consensus 245 a~~~~~~~~~~~~~~~~v~~~d~~G~~ 271 (322)
T 2fp8_A 245 SSSEELDGNMHGRVDPKGIKFDEFGNI 271 (322)
T ss_dssp EEEEETTSSTTSCEEEEEEEECTTSCE
T ss_pred EecCcccccccCCCccEEEEECCCCCE
Confidence 7532 36789997543
No 198
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=57.48 E-value=65 Score=31.41 Aligned_cols=57 Identities=14% Similarity=0.174 Sum_probs=35.9
Q ss_pred eEEEEECCCCcEEeCcCCCcccccCCeecC-CCcEEEEcCCC-------------CCCCeEEEEcCCCCCCCccccc
Q 048017 110 HSVLYDIASNTFRPLLLQTDTWCSSGAVLS-DGTLVQTGGYN-------------VGDRVIRLFTPCNDEGCDWVEL 172 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~-dG~l~vvGG~~-------------~g~~~v~~ydP~~~~t~~W~~~ 172 (566)
.+.+||+.+++.+.+..... +. ....+ ||+++++.+.. .+...+.++|+. +.+...+
T Consensus 265 ~l~~~d~~~g~~~~l~~~~~--~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~---~~~~~~l 335 (396)
T 3c5m_A 265 VIYKANPETLENEEVMVMPP--CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTK---AKSAQKL 335 (396)
T ss_dssp EEEEECTTTCCEEEEEECCS--EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETT---TTBCCEE
T ss_pred eEEEEECCCCCeEEeeeCCC--CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecc---cCceEEc
Confidence 37889999888776643321 22 45556 99988775421 134678899987 5554443
No 199
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=56.60 E-value=2.3e+02 Score=31.12 Aligned_cols=126 Identities=10% Similarity=-0.083 Sum_probs=62.5
Q ss_pred EEEEECCCCcEEeCcCC--C-cccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCc-ccccccCcceEE
Q 048017 111 SVLYDIASNTFRPLLLQ--T-DTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSK-NLWDRRWYASNQ 186 (566)
Q Consensus 111 ~~~yDp~t~~w~~l~~~--~-~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~-~M~~~R~y~s~~ 186 (566)
..+||+++++++..... . .....+...-.+|+|++... .-+.+|||. +.++..... .|+... ..+.
T Consensus 495 l~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt~-----~Gl~~~~~~---~~~~~~~~~~gl~~~~--i~~i 564 (758)
T 3ott_A 495 IDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGFH-----GGVMRINPK---DESQQSISFGSFSNNE--ILSM 564 (758)
T ss_dssp EEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEEET-----TEEEEECC-----CCCCBCCCCC---CC--EEEE
T ss_pred cEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEEec-----CceEEEecC---CCceEEecccCCCccc--eEEE
Confidence 56899999998876321 1 11111223335788987542 247889998 666654421 133221 1222
Q ss_pred EecCCcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceE-EEecCCcEEEEEcCeeEEEeccC
Q 048017 187 ILPDNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFL-HLLPDGNLFIFANRRSILFDYIN 261 (566)
Q Consensus 187 ~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~-~~l~~G~Ifv~Gg~~~e~yDp~t 261 (566)
.-.+|++++... . ..-+| |.+. ......+ .. ..+..+ ....+|+||.-+.+...+|||+.
T Consensus 565 ~~~~g~lWi~t~-~--Gl~~~~~~~~---~~~~~~~-~~--------~~~~~~~~~~~~G~l~fG~~~Gl~~f~p~~ 626 (758)
T 3ott_A 565 TCVKNSIWVSTT-N--GLWIIDRKTM---DARQQNM-TN--------KRFTSLLFDPKEDCVYLGGADGFGISHSNL 626 (758)
T ss_dssp EEETTEEEEEES-S--CEEEEETTTC---CEEEC---CC--------CCCSEEEEETTTTEEEEECBSEEEEEEC--
T ss_pred EECCCCEEEECC-C--CeEEEcCCCc---eeEEecC-CC--------CceeeeEEECCCCcEEEecCCceEEEChhh
Confidence 334788887542 2 23455 6653 2221111 00 112222 23358998876667778899974
No 200
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=55.77 E-value=42 Score=32.11 Aligned_cols=75 Identities=17% Similarity=0.158 Sum_probs=44.8
Q ss_pred eEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccc----cccCcceE
Q 048017 110 HSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLW----DRRWYASN 185 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~----~~R~y~s~ 185 (566)
.+..||+++++.+....... ..+.+...||++++..+ ..+.+||+. +.+++.+.. .. ..|- ...
T Consensus 36 ~i~~~d~~~~~~~~~~~~~~--~~~i~~~~dG~l~v~~~-----~~l~~~d~~---~g~~~~~~~-~~~~~~~~~~-~di 103 (297)
T 3g4e_A 36 KVCRWDSFTKQVQRVTMDAP--VSSVALRQSGGYVATIG-----TKFCALNWK---EQSAVVLAT-VDNDKKNNRF-NDG 103 (297)
T ss_dssp EEEEEETTTCCEEEEECSSC--EEEEEEBTTSSEEEEET-----TEEEEEETT---TTEEEEEEE-CCTTCSSEEE-EEE
T ss_pred EEEEEECCCCcEEEEeCCCc--eEEEEECCCCCEEEEEC-----CeEEEEECC---CCcEEEEEe-cCCCCCCCCC-CCE
Confidence 36789999887654432221 22345567899777642 468899998 677665443 21 1121 234
Q ss_pred EEecCCcEEEE
Q 048017 186 QILPDNRIIVV 196 (566)
Q Consensus 186 ~~L~dG~Vyvv 196 (566)
+.-+||++|+.
T Consensus 104 ~~d~dG~l~~~ 114 (297)
T 3g4e_A 104 KVDPAGRYFAG 114 (297)
T ss_dssp EECTTSCEEEE
T ss_pred EECCCCCEEEe
Confidence 45568998873
No 201
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=54.69 E-value=1.5e+02 Score=32.10 Aligned_cols=151 Identities=8% Similarity=-0.031 Sum_probs=79.9
Q ss_pred eEEEE-eeCCeEEEEeccCCCCCCCCCCCCccccCCCCCCCcccceEEEEECCCCcEEeCcCCCcc-----cccCCeecC
Q 048017 66 MHMQV-LNNDKVIIFDRTDMGPSNLSLPIDKCRKEGDVGQLDCTAHSVLYDIASNTFRPLLLQTDT-----WCSSGAVLS 139 (566)
Q Consensus 66 ~h~~~-l~~gkV~~~gg~~~~~s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~-----~c~~~~~l~ 139 (566)
+.++. -++|+.++.++.+ | .+.+||-++ .+..+. ++. ...+.+.-+
T Consensus 88 V~~vawSPdG~~LAs~s~d----------g---------------~V~iwd~~~-~l~~l~--~~~~~~~~sv~svafSP 139 (588)
T 2j04_A 88 PRVCKPSPIDDWMAVLSNN----------G---------------NVSVFKDNK-MLTNLD--SKGNLSSRTYHCFEWNP 139 (588)
T ss_dssp EEEEEECSSSSCEEEEETT----------S---------------CEEEEETTE-EEEECC--CSSCSTTTCEEEEEECS
T ss_pred EEEEEECCCCCEEEEEeCC----------C---------------cEEEEeCCc-eeeecc--CCCccccccEEEEEEcC
Confidence 44443 3688888887653 1 256777433 333333 221 244556678
Q ss_pred CCcEEEEcCCCCCCCeEEEEcCCCCCCCcc-----cccCcccc-----cccCcceEEEecCCcEEEEcCccCCeEEEE-e
Q 048017 140 DGTLVQTGGYNVGDRVIRLFTPCNDEGCDW-----VELSKNLW-----DRRWYASNQILPDNRIIVVGGRRVFTYEFY-P 208 (566)
Q Consensus 140 dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W-----~~~~~~M~-----~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P 208 (566)
||+.+++||.+ ..+++||.. ++.- ..+.. +. ...|-.+.+-.+|| ++.++.+ .++-+| .
T Consensus 140 DG~~LAsgs~D---GtVkIWd~~---~~~l~~~~~i~l~t-i~~~~~gh~~~V~sVawSPdg--Laass~D-~tVrlWd~ 209 (588)
T 2j04_A 140 IESSIVVGNED---GELQFFSIR---KNSENTPEFYFESS-IRLSDAGSKDWVTHIVWYEDV--LVAALSN-NSVFSMTV 209 (588)
T ss_dssp SSSCEEEEETT---SEEEEEECC---CCTTTCCCCEEEEE-EECSCTTCCCCEEEEEEETTE--EEEEETT-CCEEEECC
T ss_pred CCCEEEEEcCC---CEEEEEECC---CCccccccceeeee-eecccccccccEEEEEEcCCc--EEEEeCC-CeEEEEEC
Confidence 99999999974 679999988 4321 01111 11 12365566777788 5666654 455566 3
Q ss_pred CCCCCC-CeeeeccccccCCCCCCCCccceEEEecCCcEEEEE-cCeeEEEeccCCeE
Q 048017 209 KIDSLS-SSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFA-NRRSILFDYINNKL 264 (566)
Q Consensus 209 ~~~~~~-~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~G-g~~~e~yDp~t~~W 264 (566)
..+... .+..+...++ + .-...++. |++.+.+ +..+.+||..+++-
T Consensus 210 ~~~~~~~~~~tL~~~h~--~-----~V~svaFs---g~~LASa~~~tIkLWd~~~~~~ 257 (588)
T 2j04_A 210 SASSHQPVSRMIQNASR--R-----KITDLKIV---DYKVVLTCPGYVHKIDLKNYSI 257 (588)
T ss_dssp CSSSSCCCEEEEECCCS--S-----CCCCEEEE---TTEEEEECSSEEEEEETTTTEE
T ss_pred CCCccccceeeeccccc--C-----cEEEEEEE---CCEEEEEeCCeEEEEECCCCeE
Confidence 322000 1112210111 0 01112232 4555544 45678999998875
No 202
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=54.04 E-value=27 Score=35.19 Aligned_cols=50 Identities=12% Similarity=0.108 Sum_probs=32.0
Q ss_pred eEEEEECCCCcEEeC-cCC-CcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCC
Q 048017 110 HSVLYDIASNTFRPL-LLQ-TDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPC 162 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l-~~~-~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~ 162 (566)
.+.+||..+.+-... ... +.....+.++.++|+++++|+.+ ..+++||..
T Consensus 193 ~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d---g~i~iwd~~ 244 (437)
T 3gre_A 193 RVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR---GIIDIWDIR 244 (437)
T ss_dssp EEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT---SCEEEEETT
T ss_pred eEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC---CeEEEEEcC
Confidence 377899988764322 111 22222334456789999999864 568999987
No 203
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=53.89 E-value=1.9e+02 Score=29.25 Aligned_cols=156 Identities=13% Similarity=0.172 Sum_probs=80.3
Q ss_pred eEEEEeeCCeEEEEeccCCCCCCCCCCCCccccCCCCCCCcccceEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEE
Q 048017 66 MHMQVLNNDKVIIFDRTDMGPSNLSLPIDKCRKEGDVGQLDCTAHSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQ 145 (566)
Q Consensus 66 ~h~~~l~~gkV~~~gg~~~~~s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~v 145 (566)
...++-++|+||+.+..+ ..+.+||+++++.+.+...... +. .++.++|+.+.
T Consensus 134 ~~la~d~~g~lyv~d~~~-------------------------~~I~~id~~~g~~~~~~~~~~~-~~-ia~~~~g~~l~ 186 (409)
T 3hrp_A 134 WGIAAVGNNTVLAYQRDD-------------------------PRVRLISVDDNKVTTVHPGFKG-GK-PAVTKDKQRVY 186 (409)
T ss_dssp EEEEECSTTEEEEEETTT-------------------------TEEEEEETTTTEEEEEEETCCB-CB-CEECTTSSEEE
T ss_pred eEEEEeCCCCEEEEecCC-------------------------CcEEEEECCCCEEEEeeccCCC-Cc-eeEecCCCcEE
Confidence 344444799999987532 1367899998877665433222 22 55667776544
Q ss_pred EcCCCCCCCeEEEEcCCCCCCCccc--ccCcccc-cccCcceEEEec-CCcEEEEcCccCCeEEEE-eCCCCCCCeeeec
Q 048017 146 TGGYNVGDRVIRLFTPCNDEGCDWV--ELSKNLW-DRRWYASNQILP-DNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLR 220 (566)
Q Consensus 146 vGG~~~g~~~v~~ydP~~~~t~~W~--~~~~~M~-~~R~y~s~~~L~-dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p 220 (566)
+.... +...+..||+. . .|. ....... ...+-.+.+.-+ +|++|+.-. ...+..| +... ......
T Consensus 187 ~~d~~-~~~~I~~~d~~---~-~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~--~~~I~~~d~~~~---~~~~~~ 256 (409)
T 3hrp_A 187 SIGWE-GTHTVYVYMKA---S-GWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDS--NKNFGRFNVKTQ---EVTLIK 256 (409)
T ss_dssp EEBSS-TTCEEEEEEGG---G-TTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECT--TCEEEEEETTTC---CEEEEE
T ss_pred EEecC-CCceEEEEEcC---C-CceeEEeeeccchhcCCcEEEEEeCCCCeEEEEEC--CCcEEEEECCCC---CEEEEe
Confidence 44332 22378899986 2 332 2211001 223334455556 789999543 2345555 4432 111110
Q ss_pred cccccCCCCCCCCccc--eEEEec-CCcEEEEEc--CeeEEEeccCC
Q 048017 221 FLIETRDPGEENNLYP--FLHLLP-DGNLFIFAN--RRSILFDYINN 262 (566)
Q Consensus 221 ~l~~~~d~~~~~~~yp--~~~~l~-~G~Ifv~Gg--~~~e~yDp~t~ 262 (566)
-..... ....-| ...+.+ +|+||+.-. ....+||+...
T Consensus 257 ~~~~~g----~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~ 299 (409)
T 3hrp_A 257 QLELSG----SLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE 299 (409)
T ss_dssp ECCCCS----CCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC
T ss_pred cccccC----CCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC
Confidence 000000 011122 445566 688988753 45677887654
No 204
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=52.57 E-value=19 Score=38.31 Aligned_cols=89 Identities=16% Similarity=0.141 Sum_probs=53.7
Q ss_pred eEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEE---
Q 048017 110 HSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQ--- 186 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~--- 186 (566)
...++|..+++++.+.... ......+..+||+.++.+. .++...+.++|.. +++...... . ...-...+
T Consensus 176 ~i~~~d~~~g~~~~l~~~~-~~~~~~~~SpDG~~l~~~~-~~~~~~i~~~d~~---~~~~~~~~~-~--~~~~~~~~~~~ 247 (582)
T 3o4h_A 176 SLFTSNLSSGGLRVFDSGE-GSFSSASISPGMKVTAGLE-TAREARLVTVDPR---DGSVEDLEL-P--SKDFSSYRPTA 247 (582)
T ss_dssp EEEEEETTTCCCEEECCSS-CEEEEEEECTTSCEEEEEE-CSSCEEEEEECTT---TCCEEECCC-S--CSHHHHHCCSE
T ss_pred EEEEEcCCCCCceEeecCC-CccccceECCCCCEEEEcc-CCCeeEEEEEcCC---CCcEEEccC-C--CcChhhhhhcc
Confidence 4778899999988775432 2234556778999888443 2445689999998 555542221 1 11111112
Q ss_pred -----EecCCcEEEEcCccCCeEEEE
Q 048017 187 -----ILPDNRIIVVGGRRVFTYEFY 207 (566)
Q Consensus 187 -----~L~dG~VyvvGG~~~~s~E~y 207 (566)
.-+||++++.+..++ ...+|
T Consensus 248 ~~~~~~spdg~~~~~~~~~g-~~~l~ 272 (582)
T 3o4h_A 248 ITWLGYLPDGRLAVVARREG-RSAVF 272 (582)
T ss_dssp EEEEEECTTSCEEEEEEETT-EEEEE
T ss_pred ccceeEcCCCcEEEEEEcCC-cEEEE
Confidence 456998888776553 45555
No 205
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=51.39 E-value=1.4e+02 Score=29.86 Aligned_cols=88 Identities=11% Similarity=0.046 Sum_probs=47.7
Q ss_pred CCeeEEEEee---CCCCCeEEe--ccCC--------C-cccceeEEccCCeEEEEcCCCCCCCCCccccCc-CCc---EE
Q 048017 333 SRTCGRLKVT---DKYPVWSME--FMPM--------P-RVMSDMLLLPSGDVIIINGASNGTAGWEDAEEP-DRR---FV 394 (566)
Q Consensus 333 ~~s~~~~d~~---~~~~~W~~~--~M~~--------~-R~~~~~vvLpdG~V~vvGG~~~g~~~~~~~ydP-t~~---Wt 394 (566)
.+.+.+||+. .....|... .... . ...-++++=++|++||++-... +.....|| +.. |-
T Consensus 99 ~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~---~~I~rV~pdG~~~~~~~ 175 (334)
T 2p9w_A 99 ASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGM---PAIARVSADGKTVSTFA 175 (334)
T ss_dssp CCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESS---CEEEEECTTSCCEEEEE
T ss_pred CCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCC---CeEEEEeCCCCEEeeee
Confidence 3568889987 445677654 2111 1 2344677778999999865331 11335677 332 43
Q ss_pred eccCCCCCCcceeEEEEcCCCcEEEecCC
Q 048017 395 VLNPSKIPRMYHSSAVVLPDGRILVGGSN 423 (566)
Q Consensus 395 ~~~~~~~~R~yhs~a~LlpdG~V~v~GG~ 423 (566)
.-.+....|..-.-.+..|||+.|++-..
T Consensus 176 ~~~~~~~~~~G~nGIv~~pdg~~Liv~~~ 204 (334)
T 2p9w_A 176 WESGNGGQRPGYSGITFDPHSNKLIAFGG 204 (334)
T ss_dssp ECCCCSSSCCSCSEEEEETTTTEEEEESS
T ss_pred ecCCCcccccCcceEEEeCCCCEEEEEcC
Confidence 32222233433333445689976665443
No 206
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=50.66 E-value=2.6e+02 Score=29.92 Aligned_cols=134 Identities=13% Similarity=0.128 Sum_probs=69.7
Q ss_pred eEEEEECCCC-cEEeCcCC-Ccc---cccCCeecC--CCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCc
Q 048017 110 HSVLYDIASN-TFRPLLLQ-TDT---WCSSGAVLS--DGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWY 182 (566)
Q Consensus 110 ~~~~yDp~t~-~w~~l~~~-~~~---~c~~~~~l~--dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y 182 (566)
.+.+||+.++ +++.+... ... ........+ ||++++++.. ++...+..+|.. ......+ ....|.
T Consensus 285 ~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~-~g~~~l~~~~~~---~~~~~~l----~~~~~~ 356 (706)
T 2z3z_A 285 KVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRR-DGWNHLYLYDTT---GRLIRQV----TKGEWE 356 (706)
T ss_dssp EEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECT-TSSCEEEEEETT---SCEEEEC----CCSSSC
T ss_pred EEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEcc-CCccEEEEEECC---CCEEEec----CCCCeE
Confidence 5788999998 66655321 111 123446677 9998877754 355677777765 4444433 223343
Q ss_pred ce--EEEecCCcEE-EEcCccCC-eEEEE--eCCCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEcC----
Q 048017 183 AS--NQILPDNRII-VVGGRRVF-TYEFY--PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFANR---- 252 (566)
Q Consensus 183 ~s--~~~L~dG~Vy-vvGG~~~~-s~E~y--P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg~---- 252 (566)
.. .+.-+||+.+ +.+..+.. ...+| .... .....+. .. .....+...+||+.+++...
T Consensus 357 v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~--~~~~~l~---~~-------~~~~~~~~spdg~~l~~~~~~~~~ 424 (706)
T 2z3z_A 357 VTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKG--GKTKDLT---PE-------SGMHRTQLSPDGSAIIDIFQSPTV 424 (706)
T ss_dssp EEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTC--CCCEESC---CS-------SSEEEEEECTTSSEEEEEEECSSC
T ss_pred EEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCC--CCceecc---CC-------CceEEEEECCCCCEEEEEecCCCC
Confidence 32 2344577644 44443321 23444 2211 1111111 10 01223445689987776532
Q ss_pred --eeEEEeccCCe
Q 048017 253 --RSILFDYINNK 263 (566)
Q Consensus 253 --~~e~yDp~t~~ 263 (566)
...++|.++++
T Consensus 425 p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 425 PRKVTVTNIGKGS 437 (706)
T ss_dssp SCEEEEEESSSCE
T ss_pred CcEEEEEECCCCe
Confidence 36788888776
No 207
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=50.66 E-value=47 Score=33.17 Aligned_cols=64 Identities=6% Similarity=0.102 Sum_probs=37.1
Q ss_pred CCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccC----------------cceEEEecCCcEEEEc
Q 048017 134 SGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRW----------------YASNQILPDNRIIVVG 197 (566)
Q Consensus 134 ~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~----------------y~s~~~L~dG~VyvvG 197 (566)
.....++|+++++|+. ..+++||.... .+- +.. +..... -..++.-+||+.++.|
T Consensus 290 ~~~~s~~g~~l~~~~~----~~v~iwd~~~~--~~~--~~~-~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~ 360 (447)
T 3dw8_B 290 DVKFSHSGRYMMTRDY----LSVKVWDLNME--NRP--VET-YQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTG 360 (447)
T ss_dssp EEEECTTSSEEEEEES----SEEEEEETTCC--SSC--SCC-EESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEE
T ss_pred EEEECCCCCEEEEeeC----CeEEEEeCCCC--ccc--cce-eeccccccccccccccccccccceEEEECCCCCEEEEe
Confidence 3455679999998864 57999998721 211 111 111110 0125556789988888
Q ss_pred CccCCeEEEE
Q 048017 198 GRRVFTYEFY 207 (566)
Q Consensus 198 G~~~~s~E~y 207 (566)
+.++ .+.+|
T Consensus 361 s~dg-~v~iw 369 (447)
T 3dw8_B 361 SYNN-FFRMF 369 (447)
T ss_dssp CSTT-EEEEE
T ss_pred ccCC-EEEEE
Confidence 8663 45555
No 208
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=49.69 E-value=1.5e+02 Score=31.74 Aligned_cols=26 Identities=4% Similarity=0.138 Sum_probs=19.2
Q ss_pred ecCCcEEEEEc--CeeEEEec-cCCe--EEE
Q 048017 241 LPDGNLFIFAN--RRSILFDY-INNK--LVK 266 (566)
Q Consensus 241 l~~G~Ifv~Gg--~~~e~yDp-~t~~--W~~ 266 (566)
+.+|+||+... ..+..+|. ++++ |..
T Consensus 60 v~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~ 90 (571)
T 2ad6_A 60 VIGDMMYVHSAFPNNTYALNLNDPGKIVWQH 90 (571)
T ss_dssp EETTEEEEECSTTTCEEEEETTCTTSEEEEE
T ss_pred EECCEEEEEeCCCCEEEEEeCCCCccEEEEE
Confidence 45899998876 45788999 7764 653
No 209
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=47.25 E-value=1.3e+02 Score=28.08 Aligned_cols=81 Identities=7% Similarity=-0.041 Sum_probs=43.8
Q ss_pred eEEEEECCCCcEEeCcCC----CcccccCCeecCC-CcEEEEcCCCCCCCeEEEEcCCCCCCCccccc-Ccc-cccc-cC
Q 048017 110 HSVLYDIASNTFRPLLLQ----TDTWCSSGAVLSD-GTLVQTGGYNVGDRVIRLFTPCNDEGCDWVEL-SKN-LWDR-RW 181 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~----~~~~c~~~~~l~d-G~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~-~~~-M~~~-R~ 181 (566)
.+.+||+.+++++..... ......+.+...+ |+||+.... ..+.+||+. .+.... ... ...+ ..
T Consensus 47 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~----~~l~~~d~~----g~~~~~~~~~~~~~~~~~ 118 (314)
T 1pjx_A 47 EILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR----LGLLVVQTD----GTFEEIAKKDSEGRRMQG 118 (314)
T ss_dssp EEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT----TEEEEEETT----SCEEECCSBCTTSCBCBC
T ss_pred EEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC----CCEEEEeCC----CCEEEEEeccCCCccccC
Confidence 367889988888765431 1111123344467 898887642 368889986 223222 110 0111 11
Q ss_pred cceEEEecCCcEEEEcC
Q 048017 182 YASNQILPDNRIIVVGG 198 (566)
Q Consensus 182 y~s~~~L~dG~VyvvGG 198 (566)
-...+.-++|++|+...
T Consensus 119 ~~~i~~d~~g~l~v~~~ 135 (314)
T 1pjx_A 119 CNDCAFDYEGNLWITAP 135 (314)
T ss_dssp CCEEEECTTSCEEEEEC
T ss_pred CcCEEECCCCCEEEEec
Confidence 22455556899988654
No 210
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=47.22 E-value=1.8e+02 Score=26.97 Aligned_cols=87 Identities=13% Similarity=0.177 Sum_probs=45.3
Q ss_pred eEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccc-cccCcceEEEe
Q 048017 110 HSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLW-DRRWYASNQIL 188 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~-~~R~y~s~~~L 188 (566)
.+.+||..+++-......+...+ .....++.+++.|+.. ..+..++.. .... .... +. ...........
T Consensus 90 ~v~iw~~~~~~~~~~~~~h~~~~--~~~~~~~~~l~s~~~~---~~~~~~~~~---~~~~-~~~~-~~~~~~~~~~~~~~ 159 (318)
T 4ggc_A 90 EVQLWDVQQQKRLRNMTSHSARV--GSLSWNSYILSSGSRS---GHIHHHDVR---VAEH-HVAT-LSGHSQEVCGLRWA 159 (318)
T ss_dssp EEEEEETTTTEEEEEEECCSSCE--EEEEEETTEEEEEETT---SEEEEEETT---SSSC-EEEE-EECCSSCEEEEEEC
T ss_pred cEEEeecCCceeEEEecCccceE--EEeecCCCEEEEEecC---CceEeeecC---CCce-eEEE-EcCccCceEEEEEc
Confidence 47788988876543322222222 1233467888888753 345556554 2221 1111 11 12223334455
Q ss_pred cCCcEEEEcCccCCeEEEE
Q 048017 189 PDNRIIVVGGRRVFTYEFY 207 (566)
Q Consensus 189 ~dG~VyvvGG~~~~s~E~y 207 (566)
.+|+.++.|+.++ .+.+|
T Consensus 160 ~~~~~l~s~~~d~-~i~iw 177 (318)
T 4ggc_A 160 PDGRHLASGGNDN-LVNVW 177 (318)
T ss_dssp TTSSEEEEEETTS-CEEEE
T ss_pred CCCCEEEEEecCc-ceeEE
Confidence 6888888887654 45566
No 211
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=46.16 E-value=1.3e+02 Score=29.13 Aligned_cols=75 Identities=15% Similarity=0.009 Sum_probs=43.2
Q ss_pred eEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccc----cccCcceE
Q 048017 110 HSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLW----DRRWYASN 185 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~----~~R~y~s~ 185 (566)
.+.+||+++++.+....... ..+.+...||++++... ..+.+||+. +.+.+.+.. .. ..| -...
T Consensus 72 ~i~~~d~~~~~~~~~~~~~~--v~~i~~~~dg~l~v~~~-----~gl~~~d~~---~g~~~~~~~-~~~~~~~~~-~~~i 139 (326)
T 2ghs_A 72 ELHELHLASGRKTVHALPFM--GSALAKISDSKQLIASD-----DGLFLRDTA---TGVLTLHAE-LESDLPGNR-SNDG 139 (326)
T ss_dssp EEEEEETTTTEEEEEECSSC--EEEEEEEETTEEEEEET-----TEEEEEETT---TCCEEEEEC-SSTTCTTEE-EEEE
T ss_pred EEEEEECCCCcEEEEECCCc--ceEEEEeCCCeEEEEEC-----CCEEEEECC---CCcEEEEee-CCCCCCCCC-CCCE
Confidence 36789999887665432211 12234457899888642 348899997 666654432 11 112 1234
Q ss_pred EEecCCcEEEE
Q 048017 186 QILPDNRIIVV 196 (566)
Q Consensus 186 ~~L~dG~Vyvv 196 (566)
+.-+||++|+.
T Consensus 140 ~~d~~G~l~v~ 150 (326)
T 2ghs_A 140 RMHPSGALWIG 150 (326)
T ss_dssp EECTTSCEEEE
T ss_pred EECCCCCEEEE
Confidence 44568888763
No 212
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=44.49 E-value=1.2e+02 Score=32.40 Aligned_cols=92 Identities=16% Similarity=0.130 Sum_probs=53.9
Q ss_pred eEEEEECC-CC---cEEeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCc---ccccccCc
Q 048017 110 HSVLYDIA-SN---TFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSK---NLWDRRWY 182 (566)
Q Consensus 110 ~~~~yDp~-t~---~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~---~M~~~R~y 182 (566)
.+.++|.. ++ +.+.+..............+||++++++.. ++...+..+|+. +.+++.+.. ....+.|.
T Consensus 218 ~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~-~~~~~l~~~~~~---~~~~~~l~~~~~~~~~p~w~ 293 (662)
T 3azo_A 218 ELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDR-TGWWNLHRVDPA---TGAATQLCRREEEFAGPLWT 293 (662)
T ss_dssp EEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECT-TSSCEEEEECTT---TCCEEESSCCSSBSSCCCCS
T ss_pred EEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECC-CCCeEEEEEECC---CCceeecccccccccCcccc
Confidence 57788888 56 444443321222223455679998877754 345578899987 667766543 11223443
Q ss_pred c---eEEEecCCcEEEEcCccCCeEEEE
Q 048017 183 A---SNQILPDNRIIVVGGRRVFTYEFY 207 (566)
Q Consensus 183 ~---s~~~L~dG~VyvvGG~~~~s~E~y 207 (566)
+ +.+..+||++++.+.. ....+|
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~--~~~~l~ 319 (662)
T 3azo_A 294 PGMRWFAPLANGLIAVVHGK--GAAVLG 319 (662)
T ss_dssp TTCCSEEECTTSCEEEEEBS--SSCEEE
T ss_pred ccCceEeEeCCCEEEEEEEc--CccEEE
Confidence 2 3444568998888765 334454
No 213
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=44.32 E-value=99 Score=35.65 Aligned_cols=84 Identities=6% Similarity=-0.005 Sum_probs=49.8
Q ss_pred eEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCCC-------CCCeEEEEcCCCCCCCcccccCcccccccCc
Q 048017 110 HSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNV-------GDRVIRLFTPCNDEGCDWVELSKNLWDRRWY 182 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~-------g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y 182 (566)
.+.+||.++++.+.+...+.......+..+||+.+++++... ....+.++|.. +.+...+.. ....-
T Consensus 401 ~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~---~g~~~~l~~---~~~~~ 474 (1045)
T 1k32_A 401 EIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDME---GRKIFAATT---ENSHD 474 (1045)
T ss_dssp EEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETT---TTEEEECSC---SSSBE
T ss_pred eEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECC---CCcEEEeeC---CCccc
Confidence 467899999887766533333334456678999888775421 23578999987 555443322 11111
Q ss_pred ceEEEecCCcEEEEcCc
Q 048017 183 ASNQILPDNRIIVVGGR 199 (566)
Q Consensus 183 ~s~~~L~dG~VyvvGG~ 199 (566)
.+.+.-+||+.++++..
T Consensus 475 ~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 475 YAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp EEEEECTTSCEEEEEES
T ss_pred CCceEcCCCCEEEEEec
Confidence 23445568886665543
No 214
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=40.38 E-value=1.4e+02 Score=32.42 Aligned_cols=147 Identities=16% Similarity=0.222 Sum_probs=0.0
Q ss_pred EecCCcEEEEEc--CeeEEEec-cCCeEEEeecccCCCCCCccC-------CCCcee--eecccccCCCCCCCCCCCCCC
Q 048017 240 LLPDGNLFIFAN--RRSILFDY-INNKLVKEFPVIPGNDKRNYP-------STGSSI--LLPVKLSAGSDGNGTAALPDA 307 (566)
Q Consensus 240 ~l~~G~Ifv~Gg--~~~e~yDp-~t~~W~~~~p~lp~~~~r~~~-------~~g~av--llpl~~~~~~~~~~y~~~~~g 307 (566)
++.+|+||+... ..+..+|. ++++-..... +.......+ ..+.++ . ++
T Consensus 59 ~v~~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~--~~~~~~~~~~~~~~~~~~g~av~p~------------------~g 118 (599)
T 1w6s_A 59 LVVDGKMYIHTSFPNNTFALGLDDPGTILWQDK--PKQNPAARAVACCDLVNRGLAYWPG------------------DG 118 (599)
T ss_dssp EEETTEEEEECSTTTCEEEEETTCTTSEEEEEC--CCCCGGGGGGCSSCSCCCCCEEECC------------------CS
T ss_pred EEECCEEEEEeCCCCEEEEEeCCCCCcEEEEEC--CCCCccccccccccccccceEEEec------------------CC
Q ss_pred E----EEEEcCCCCCccccccccccccccCCeeEEEEeeCCCCCeEEe--ccCCCcccceeEEccCCeEEE-EcCCCCCC
Q 048017 308 E----VMVCGGAPAGAFIKSDKESVYVEASRTCGRLKVTDKYPVWSME--FMPMPRVMSDMLLLPSGDVII-INGASNGT 380 (566)
Q Consensus 308 k----I~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W~~~--~M~~~R~~~~~vvLpdG~V~v-vGG~~~g~ 380 (566)
+ ||+.... ..+..+|.......|+.. .-........+-++.+|+||+ .+|...+.
T Consensus 119 ~~~~rV~v~t~d------------------g~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~ 180 (599)
T 1w6s_A 119 KTPALILKTQLD------------------GNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGV 180 (599)
T ss_dssp SSCCEEEEECTT------------------SEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTC
T ss_pred cceeEEEEEcCC------------------CEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCC
Q ss_pred CCCccccCc---CCcEEeccCCCCCC-----------------------------------cceeEEEEcCCCcEEEecC
Q 048017 381 AGWEDAEEP---DRRFVVLNPSKIPR-----------------------------------MYHSSAVVLPDGRILVGGS 422 (566)
Q Consensus 381 ~~~~~~ydP---t~~Wt~~~~~~~~R-----------------------------------~yhs~a~LlpdG~V~v~GG 422 (566)
.+...++|+ ...|+.-..-+... ...+.++-..+|+||+.-|
T Consensus 181 ~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g 260 (599)
T 1w6s_A 181 RGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTG 260 (599)
T ss_dssp CCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECC
T ss_pred CCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCC
Q ss_pred CC
Q 048017 423 NP 424 (566)
Q Consensus 423 ~~ 424 (566)
+.
T Consensus 261 ~~ 262 (599)
T 1w6s_A 261 NP 262 (599)
T ss_dssp CC
T ss_pred CC
No 215
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=39.60 E-value=91 Score=30.32 Aligned_cols=81 Identities=17% Similarity=0.180 Sum_probs=47.2
Q ss_pred eEEEEECCCCcEEeCcCCC-cccccCCeecCCCcEEEEcCCCCCCC--eEEEEcCCCCCCCcccccCcccccccCcceEE
Q 048017 110 HSVLYDIASNTFRPLLLQT-DTWCSSGAVLSDGTLVQTGGYNVGDR--VIRLFTPCNDEGCDWVELSKNLWDRRWYASNQ 186 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~-~~~c~~~~~l~dG~l~vvGG~~~g~~--~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~ 186 (566)
...++|..+++++.+.... ...+......+||+.+++.....+.. .+.++|.. +.+...+.. +. .+. ..
T Consensus 217 ~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~---~g~~~~l~~-~~--~~~--~~ 288 (396)
T 3c5m_A 217 RMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPE---TLENEEVMV-MP--PCS--HL 288 (396)
T ss_dssp CCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTT---TCCEEEEEE-CC--SEE--EE
T ss_pred eEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECC---CCCeEEeee-CC--CCC--CC
Confidence 4678899888887776521 22233345667998655554333333 48999987 555544332 22 222 34
Q ss_pred Eec-CCcEEEEcC
Q 048017 187 ILP-DNRIIVVGG 198 (566)
Q Consensus 187 ~L~-dG~VyvvGG 198 (566)
..+ ||++++..+
T Consensus 289 ~s~~dg~~l~~~~ 301 (396)
T 3c5m_A 289 MSNFDGSLMVGDG 301 (396)
T ss_dssp EECSSSSEEEEEE
T ss_pred ccCCCCceEEEec
Confidence 446 888777654
No 216
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=39.59 E-value=1.1e+02 Score=29.16 Aligned_cols=102 Identities=17% Similarity=0.240 Sum_probs=57.9
Q ss_pred ecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccC--cceEEEecCCcEEEEcCccCCeEEEEeCCCCCC
Q 048017 137 VLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRW--YASNQILPDNRIIVVGGRRVFTYEFYPKIDSLS 214 (566)
Q Consensus 137 ~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~--y~s~~~L~dG~VyvvGG~~~~s~E~yP~~~~~~ 214 (566)
+-+||+||++ . + ..+...+|.++....|...+..+-..=| +-+...=++|.+|++ .++.-+.+-|.++..+
T Consensus 48 f~P~G~LYaV--~-~--G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~ 120 (236)
T 1tl2_A 48 LSPGGELYGV--L-N--DKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTD 120 (236)
T ss_dssp ECTTSCEEEE--E-T--TEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTC
T ss_pred ECCCccEEEE--e-C--CeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCC
Confidence 3359999999 2 2 3578888864435678765432211111 233444468999998 4432222224333345
Q ss_pred Ceee-eccccccCCCCCCCCccceEEEecCCcEEEEE
Q 048017 215 SSLY-LRFLIETRDPGEENNLYPFLHLLPDGNLFIFA 250 (566)
Q Consensus 215 ~w~~-~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~G 250 (566)
.|.. ...+-+ .....+++.+..++|.||++.
T Consensus 121 ~Wl~~a~~vg~-----~gw~~~~~lff~p~G~Lyav~ 152 (236)
T 1tl2_A 121 NWIARATEVGS-----GGWSGFKFLFFHPNGYLYAVH 152 (236)
T ss_dssp CHHHHSEEEEC-----SSGGGEEEEEECTTSCEEEEE
T ss_pred ceeccccEecc-----CCCCceEEEEECCCceEEEEe
Confidence 6742 232211 123456777888999999887
No 217
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=38.46 E-value=1.3e+02 Score=32.29 Aligned_cols=83 Identities=7% Similarity=0.128 Sum_probs=42.8
Q ss_pred EEEEEC-CCCc--EEeCcCCC-c----cccc---CCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccc
Q 048017 111 SVLYDI-ASNT--FRPLLLQT-D----TWCS---SGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDR 179 (566)
Q Consensus 111 ~~~yDp-~t~~--w~~l~~~~-~----~~c~---~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~ 179 (566)
+..+|. ++++ |+.-.... . ..|. .+.++.+++||+.... ..+..+|..+. ...|+.-.......
T Consensus 75 v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d----g~l~alD~~tG-~~~W~~~~~~~~~~ 149 (571)
T 2ad6_A 75 TYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQAN----GHLLALDAKTG-KINWEVEVCDPKVG 149 (571)
T ss_dssp EEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT----SEEEEEETTTC-CEEEEEECCCGGGT
T ss_pred EEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeCC----CEEEEEECCCC-CEEEEecCCCCCcc
Confidence 667888 7765 77543221 1 2232 2345567888876432 46888998732 34687432101111
Q ss_pred cCcceEEEecCCcEEEEcC
Q 048017 180 RWYASNQILPDNRIIVVGG 198 (566)
Q Consensus 180 R~y~s~~~L~dG~VyvvGG 198 (566)
....+.-++.+|+||+..+
T Consensus 150 ~~~~~~P~v~~g~v~vg~~ 168 (571)
T 2ad6_A 150 STLTQAPFVAKDTVLMGCS 168 (571)
T ss_dssp CBCCSCCEEETTEEEEECB
T ss_pred ceeccCCEEECCEEEEEec
Confidence 1111222334888887543
No 218
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=38.00 E-value=79 Score=33.34 Aligned_cols=81 Identities=14% Similarity=0.078 Sum_probs=50.5
Q ss_pred EEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCCCC-CCeEEEEcCCCCCCCcccccCcccccccCcceEEEec
Q 048017 111 SVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVG-DRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILP 189 (566)
Q Consensus 111 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g-~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~ 189 (566)
..+||.++++.+.+..... ...+.-+||+.++++....+ ...++++|.. +.+++.+.. ......+.+--+
T Consensus 134 ~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~~~~i~~~d~~---~g~~~~l~~---~~~~~~~~~~Sp 204 (582)
T 3o4h_A 134 VALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLS---SGGLRVFDS---GEGSFSSASISP 204 (582)
T ss_dssp EEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETTEEEEEEEETT---TCCCEEECC---SSCEEEEEEECT
T ss_pred ceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCCCeEEEEEcCC---CCCceEeec---CCCccccceECC
Confidence 3488999988777654322 33455689999987765422 2568899988 666665433 111123345557
Q ss_pred CCcEEEEcCcc
Q 048017 190 DNRIIVVGGRR 200 (566)
Q Consensus 190 dG~VyvvGG~~ 200 (566)
||+.++.+..+
T Consensus 205 DG~~l~~~~~~ 215 (582)
T 3o4h_A 205 GMKVTAGLETA 215 (582)
T ss_dssp TSCEEEEEECS
T ss_pred CCCEEEEccCC
Confidence 99988854433
No 219
>2vov_A MOPE, surface-associated protein; metal-binding protein, oxidized tryptophan, methanotroph bacterium, kunurenine, copper binding; HET: KYN; 1.35A {Methylococcus capsulatus} PDB: 2vox_A* 2vow_A
Probab=37.73 E-value=39 Score=30.99 Aligned_cols=34 Identities=35% Similarity=0.877 Sum_probs=26.1
Q ss_pred ceEEEEEEcCCCCCcCCCcceEEEEEc-----------CC----------CCcccEEEEEE
Q 048017 525 YAYKVVVNGPPTATVAPPGYYMMFVVH-----------AG----------IPSHAVWVKVT 564 (566)
Q Consensus 525 ~~~~~~v~~P~~~~~~ppG~ymlfv~~-----------~g----------vPS~a~~v~v~ 564 (566)
+..+-.+++|. -|||||+|-| +| ||..+-||.|.
T Consensus 278 gaftksitlpk------tgyymlyvanvlevddwsvdadgkltttgevwevpakgcwvnit 332 (336)
T 2vov_A 278 GAFTKSITLPK------TGYYMLYVANVLEVDDWSVDADGKLTTTGEVWEVPAKGCWVNIT 332 (336)
T ss_dssp TEEEEEEECSS------SEEEEEEEEECCEESEEEECTTCCEEEESCCCCSSSSEEEEEEE
T ss_pred ceeeeeeeccC------cceEEEEEeeeEEeccceeccCCceeecceEEeccCCceEEEEE
Confidence 35677788876 4999999864 22 89999999886
No 220
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=37.45 E-value=4.3e+02 Score=28.60 Aligned_cols=125 Identities=11% Similarity=0.060 Sum_probs=61.9
Q ss_pred eEEEEECCCCcE--------EeCc---CCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCc----ccccCc
Q 048017 110 HSVLYDIASNTF--------RPLL---LQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCD----WVELSK 174 (566)
Q Consensus 110 ~~~~yDp~t~~w--------~~l~---~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~----W~~~~~ 174 (566)
.+.+||.+++.- ..+. .-+..+-...+..+|| +++++.+ +.++++|.. ++. |..+.
T Consensus 152 tVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D---~tVrlWd~~---~~~~~~~~~tL~- 222 (588)
T 2j04_A 152 ELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSN---NSVFSMTVS---ASSHQPVSRMIQ- 222 (588)
T ss_dssp EEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETT---CCEEEECCC---SSSSCCCEEEEE-
T ss_pred EEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCC---CeEEEEECC---CCccccceeeec-
Confidence 478999988742 2221 1122233345666788 4555543 679999987 333 22221
Q ss_pred ccccccCcceEEEecCCcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceEEE--ecCCcEEEEEc
Q 048017 175 NLWDRRWYASNQILPDNRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHL--LPDGNLFIFAN 251 (566)
Q Consensus 175 ~M~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~--l~~G~Ifv~Gg 251 (566)
...|..-..+... |..+++++. .++.+| .... .-..... ... ...-.+.. .+||++++.++
T Consensus 223 --~~h~~~V~svaFs-g~~LASa~~--~tIkLWd~~~~---~~~~~~~--gh~------~~V~~va~~~s~d~~~La~a~ 286 (588)
T 2j04_A 223 --NASRRKITDLKIV-DYKVVLTCP--GYVHKIDLKNY---SISSLKT--GSL------ENFHIIPLNHEKESTILLMSN 286 (588)
T ss_dssp --CCCSSCCCCEEEE-TTEEEEECS--SEEEEEETTTT---EEEEEEC--SCC------SCCCEEEETTCSSCEEEEECS
T ss_pred --ccccCcEEEEEEE-CCEEEEEeC--CeEEEEECCCC---eEEEEEc--CCC------ceEEEEEeeeCCCCCEEEEEc
Confidence 1233333333443 566676663 467777 3321 1111111 110 11112344 57888888887
Q ss_pred CeeE-EEec
Q 048017 252 RRSI-LFDY 259 (566)
Q Consensus 252 ~~~e-~yDp 259 (566)
.+.. +|..
T Consensus 287 edG~klw~~ 295 (588)
T 2j04_A 287 KTSYKVLLE 295 (588)
T ss_dssp SCEEEEEES
T ss_pred CCCCEEEee
Confidence 5543 4443
No 221
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=36.40 E-value=2.7e+02 Score=25.90 Aligned_cols=111 Identities=13% Similarity=0.038 Sum_probs=53.3
Q ss_pred cEEEEcCCCCCCCeEEEEcCCCCCCCcccccCccccccc-CcceEEEecCCc-EEEEcCccCCeEEEE-eCCCCCCCee-
Q 048017 142 TLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRR-WYASNQILPDNR-IIVVGGRRVFTYEFY-PKIDSLSSSL- 217 (566)
Q Consensus 142 ~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R-~y~s~~~L~dG~-VyvvGG~~~~s~E~y-P~~~~~~~w~- 217 (566)
.++++++. ...+.+||+. +.+....-. +.... .-...+.-+||+ +|+.+.. ...+.+| ..+. ...
T Consensus 2 ~~~v~~~~---~~~v~~~d~~---~~~~~~~~~-~~~~~~~~~~~~~s~dg~~l~v~~~~-~~~v~~~d~~~~---~~~~ 70 (337)
T 1pby_B 2 DYILAPAR---PDKLVVIDTE---KMAVDKVIT-IADAGPTPMVPMVAPGGRIAYATVNK-SESLVKIDLVTG---ETLG 70 (337)
T ss_dssp EEEEEEET---TTEEEEEETT---TTEEEEEEE-CTTCTTCCCCEEECTTSSEEEEEETT-TTEEEEEETTTC---CEEE
T ss_pred cEEEEcCC---CCeEEEEECC---CCcEEEEEE-cCCCCCCccceEEcCCCCEEEEEeCC-CCeEEEEECCCC---CeEe
Confidence 35566553 2578999987 544322111 22211 123455566885 5665543 3456666 4332 111
Q ss_pred eeccccccCCCCCCCCccc-eEEEecCCcEEEEEc--------------CeeEEEeccCCeEEEee
Q 048017 218 YLRFLIETRDPGEENNLYP-FLHLLPDGNLFIFAN--------------RRSILFDYINNKLVKEF 268 (566)
Q Consensus 218 ~~p~l~~~~d~~~~~~~yp-~~~~l~~G~Ifv~Gg--------------~~~e~yDp~t~~W~~~~ 268 (566)
..+..... .....| .+...+||+.+++++ ....+||..+.+..+.+
T Consensus 71 ~~~~~~~~-----~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~ 131 (337)
T 1pby_B 71 RIDLSTPE-----ERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAF 131 (337)
T ss_dssp EEECCBTT-----EEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEE
T ss_pred eEEcCCcc-----cccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEE
Confidence 12211000 000011 234567886444442 56788999988765444
No 222
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=35.35 E-value=25 Score=33.84 Aligned_cols=58 Identities=12% Similarity=0.015 Sum_probs=35.8
Q ss_pred EEEeeCCeEEEEeccCCCCCCCCCCCCccccCCCCCCCcccceEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEc
Q 048017 68 MQVLNNDKVIIFDRTDMGPSNLSLPIDKCRKEGDVGQLDCTAHSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTG 147 (566)
Q Consensus 68 ~~~l~~gkV~~~gg~~~~~s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvG 147 (566)
.+.-++|++++.|+.+ | .+.+||..+.+-...-..+.......+..+||+.+++|
T Consensus 279 ~~~sp~~~~l~s~~~d----------g---------------~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~ 333 (368)
T 3mmy_A 279 IAFHPVHGTLATVGSD----------G---------------RFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYA 333 (368)
T ss_dssp EEECTTTCCEEEEETT----------S---------------CEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEE
T ss_pred EEEecCCCEEEEEccC----------C---------------eEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEE
Confidence 3344688888887754 1 36789988775433222222233344566799999988
Q ss_pred CCC
Q 048017 148 GYN 150 (566)
Q Consensus 148 G~~ 150 (566)
+.+
T Consensus 334 s~d 336 (368)
T 3mmy_A 334 SSY 336 (368)
T ss_dssp ECC
T ss_pred ecc
Confidence 754
No 223
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=34.80 E-value=2e+02 Score=30.81 Aligned_cols=85 Identities=16% Similarity=0.101 Sum_probs=47.5
Q ss_pred ceEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCCCC--CCeEEEEcCCCCCCCcccccCcccccccCcceEE
Q 048017 109 AHSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVG--DRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQ 186 (566)
Q Consensus 109 ~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g--~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~ 186 (566)
.....+|...+..+.+...........+..+||+.+++.+..++ ...+..+|.. +.+.+.+. ......+.+
T Consensus 335 ~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~---~~~~~~l~----~~~~~~~~~ 407 (706)
T 2z3z_A 335 NHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIK---GGKTKDLT----PESGMHRTQ 407 (706)
T ss_dssp CEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETT---CCCCEESC----CSSSEEEEE
T ss_pred cEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcC---CCCceecc----CCCceEEEE
Confidence 35666777677777775432111111345578875555444333 3577788877 55544332 233344555
Q ss_pred EecCCcEEEEcCcc
Q 048017 187 ILPDNRIIVVGGRR 200 (566)
Q Consensus 187 ~L~dG~VyvvGG~~ 200 (566)
.-+||+.+++....
T Consensus 408 ~spdg~~l~~~~~~ 421 (706)
T 2z3z_A 408 LSPDGSAIIDIFQS 421 (706)
T ss_dssp ECTTSSEEEEEEEC
T ss_pred ECCCCCEEEEEecC
Confidence 56799888776543
No 224
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=34.74 E-value=3.5e+02 Score=27.22 Aligned_cols=144 Identities=10% Similarity=0.065 Sum_probs=0.0
Q ss_pred CCeEEEEeccCCCCCCCCCCCCccccCCCCCCCcccceEEEEECCCCcEEeCcCCCcccccCC---eecCCCcEE-----
Q 048017 73 NDKVIIFDRTDMGPSNLSLPIDKCRKEGDVGQLDCTAHSVLYDIASNTFRPLLLQTDTWCSSG---AVLSDGTLV----- 144 (566)
Q Consensus 73 ~gkV~~~gg~~~~~s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~---~~l~dG~l~----- 144 (566)
+++.++-|+.+ ..+.+||++|++....-..+....... ++.+||+++
T Consensus 192 ~~~~LaSgS~D-------------------------~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~ 246 (356)
T 2w18_A 192 MQEALLGTTIM-------------------------NNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSH 246 (356)
T ss_dssp STTEEEEEETT-------------------------SEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC-
T ss_pred CCceEEEecCC-------------------------CcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEecc
Q ss_pred -------EEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEecCCcE---EEEcCccCCeEEEE-eCCCCC
Q 048017 145 -------QTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILPDNRI---IVVGGRRVFTYEFY-PKIDSL 213 (566)
Q Consensus 145 -------vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~dG~V---yvvGG~~~~s~E~y-P~~~~~ 213 (566)
+.|+.+ .+++++|+. +.+-...-. ... .-.+....+ +|.. +++.|....++-+| ..+.
T Consensus 247 ~~~~w~laSGs~D---~tIklWd~~---tgk~l~v~~-~~~-p~Gh~~~~l-sg~~sg~~lASgS~DgTIkIWDl~tG-- 315 (356)
T 2w18_A 247 PCAKESESLRSPV---FQLIVINPK---TTLSVGVML-YCL-PPGQAGRFL-EGDVKDHCAAAILTSGTIAIWDLLLG-- 315 (356)
T ss_dssp -----------CC---EEEEEEETT---TTEEEEEEE-ECC-CTTCCCCEE-EEEEETTEEEEEETTSCEEEEETTTC--
T ss_pred CCCcceeeccCCC---cEEEEEECC---CCEEEEEEE-eec-cCCCcceeE-ccccCCCEEEEEcCCCcEEEEECCCC--
Q ss_pred CCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEc--CeeEEEecc
Q 048017 214 SSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFAN--RRSILFDYI 260 (566)
Q Consensus 214 ~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg--~~~e~yDp~ 260 (566)
.....+....+. ....+.-.|||++++.|+ ....+||..
T Consensus 316 ---k~l~tL~gH~~~-----vvs~vafSPDG~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 316 ---QCTALLPPVSDQ-----HWSFVKWSGTDSHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp ---SEEEEECCC--C-----CCCEEEECSSSSEEEEECTTSCEEEEEEC
T ss_pred ---cEEEEecCCCCC-----eEEEEEECCCCCEEEEEECCCcEEEecCC
No 225
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=33.91 E-value=2.5e+02 Score=30.26 Aligned_cols=89 Identities=21% Similarity=0.222 Sum_probs=50.4
Q ss_pred eEEEEECCCCcEEeCcCCC-ccc---ccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcce-
Q 048017 110 HSVLYDIASNTFRPLLLQT-DTW---CSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYAS- 184 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~-~~~---c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s- 184 (566)
.+.+||+.+++.+.+.... ..+ ....+..+||++++++.. ++...++.+|.. .. +.. +....|...
T Consensus 313 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~-~g~~~l~~~~~~---~~-~~~----l~~~~~~v~~ 383 (741)
T 2ecf_A 313 DLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSER-TGFQHLYRIDSK---GK-AAA----LTHGNWSVDE 383 (741)
T ss_dssp EEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECT-TSSCEEEEECSS---SC-EEE----SCCSSSCEEE
T ss_pred EEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecC-CCccEEEEEcCC---CC-eee----eeecceEEEe
Confidence 5788999998877654321 111 124567789998777764 456678888865 43 433 333344322
Q ss_pred E-EEecCCc-EEEEcCccC-CeEEEE
Q 048017 185 N-QILPDNR-IIVVGGRRV-FTYEFY 207 (566)
Q Consensus 185 ~-~~L~dG~-VyvvGG~~~-~s~E~y 207 (566)
. ..-+||+ |++.+..+. ....+|
T Consensus 384 ~~~~s~dg~~l~~~~~~~~~~~~~l~ 409 (741)
T 2ecf_A 384 LLAVDEKAGLAYFRAGIESARESQIY 409 (741)
T ss_dssp EEEEETTTTEEEEEECSSCTTCBEEE
T ss_pred EeEEeCCCCEEEEEEeCCCCceEEEE
Confidence 2 2346886 444444332 145566
No 226
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=33.84 E-value=2.3e+02 Score=30.41 Aligned_cols=27 Identities=22% Similarity=0.397 Sum_probs=20.4
Q ss_pred EecCCcEEEEEc-CeeEEEeccCCe--EEE
Q 048017 240 LLPDGNLFIFAN-RRSILFDYINNK--LVK 266 (566)
Q Consensus 240 ~l~~G~Ifv~Gg-~~~e~yDp~t~~--W~~ 266 (566)
++.+|+||+... .....+|.++++ |..
T Consensus 65 ~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~ 94 (582)
T 1flg_A 65 IVSDGVIYVTASYSRLFALDAKTGKRLWTY 94 (582)
T ss_dssp EEETTEEEEEETTTEEEEEESSSCCEEEEE
T ss_pred EEECCEEEEEcCCCCEEEEECCCCcEEEEE
Confidence 346999999876 558889998864 654
No 227
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=33.60 E-value=1.3e+02 Score=29.16 Aligned_cols=60 Identities=12% Similarity=0.012 Sum_probs=32.5
Q ss_pred eEEEEECCCCcEEeCcCCCc--c--c-ccCCeecCCCcEEEEcCC-----C-CCCCeEEEEcCCCCCCCccccc
Q 048017 110 HSVLYDIASNTFRPLLLQTD--T--W-CSSGAVLSDGTLVQTGGY-----N-VGDRVIRLFTPCNDEGCDWVEL 172 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~~--~--~-c~~~~~l~dG~l~vvGG~-----~-~g~~~v~~ydP~~~~t~~W~~~ 172 (566)
.+.+||+++++.+.+..... . . ..+....+||+.+++.-. . .+...+.++|+. +.+-+.+
T Consensus 265 ~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~---~~~~~~l 335 (388)
T 3pe7_A 265 FIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMK---NGTQHRV 335 (388)
T ss_dssp EEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETT---TTEEEEE
T ss_pred eEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEecc---CCceEEe
Confidence 37789999988766643221 0 0 122356678875554211 1 234678899987 5554433
No 228
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=32.75 E-value=5.1e+02 Score=28.11 Aligned_cols=25 Identities=16% Similarity=0.213 Sum_probs=18.8
Q ss_pred ecCCcEEEEEc-CeeEEEeccCCe--EE
Q 048017 241 LPDGNLFIFAN-RRSILFDYINNK--LV 265 (566)
Q Consensus 241 l~~G~Ifv~Gg-~~~e~yDp~t~~--W~ 265 (566)
+.+|+||+... ..+..+|.++++ |.
T Consensus 75 v~~g~vyv~~~~~~v~AlD~~tG~~~W~ 102 (677)
T 1kb0_A 75 VVDGIMYVSASWSVVHAIDTRTGNRIWT 102 (677)
T ss_dssp EETTEEEEECGGGCEEEEETTTTEEEEE
T ss_pred EECCEEEEECCCCeEEEEECCCCcEEEE
Confidence 45899998876 457889998875 54
No 229
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=32.64 E-value=5.2e+02 Score=28.13 Aligned_cols=80 Identities=8% Similarity=0.130 Sum_probs=41.0
Q ss_pred EEEEECCCCc--EEeCcCCC-----ccccc---CCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCccccccc
Q 048017 111 SVLYDIASNT--FRPLLLQT-----DTWCS---SGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRR 180 (566)
Q Consensus 111 ~~~yDp~t~~--w~~l~~~~-----~~~c~---~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R 180 (566)
+..+|.+|++ |+.-.... ...|. .+..+.+|+||+.... ..+..+|..+. ...|+.... ....+
T Consensus 82 v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~d----g~l~AlDa~TG-~~~W~~~~~-~~~~~ 155 (689)
T 1yiq_A 82 VYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLD----GRLEAIDAKTG-QRAWSVDTR-ADHKR 155 (689)
T ss_dssp EEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT----SEEEEEETTTC-CEEEEEECC-SCTTS
T ss_pred EEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccC----CEEEEEECCCC-CEeeeecCc-CCCCC
Confidence 5678887765 76533221 12232 2344557777775432 46888998732 345875321 01111
Q ss_pred -C-cceEEEecCCcEEEE
Q 048017 181 -W-YASNQILPDNRIIVV 196 (566)
Q Consensus 181 -~-y~s~~~L~dG~Vyvv 196 (566)
+ ..++.++.+|+||+.
T Consensus 156 ~~~~~~sP~v~~g~v~vg 173 (689)
T 1yiq_A 156 SYTITGAPRVVNGKVVIG 173 (689)
T ss_dssp CCBCCSCCEEETTEEEEC
T ss_pred CccccCCcEEECCEEEEE
Confidence 1 112223348888874
No 230
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=32.05 E-value=2.1e+02 Score=30.56 Aligned_cols=125 Identities=14% Similarity=0.066 Sum_probs=63.5
Q ss_pred CCcEEeCcCCCcccccC-CeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCc--ccccccCcceEEEe------
Q 048017 118 SNTFRPLLLQTDTWCSS-GAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSK--NLWDRRWYASNQIL------ 188 (566)
Q Consensus 118 t~~w~~l~~~~~~~c~~-~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~--~M~~~R~y~s~~~L------ 188 (566)
-.+|+.........|.. .+.+.||+|++..-.........++--. |...+|++... .|..+....+...+
T Consensus 199 G~TW~~~~~~~~~~~~~~v~~~~dG~l~~~~r~~~~~~~~~~~~S~-DgG~tW~~~~~~~~l~~p~~~~s~~~~~~~~~~ 277 (601)
T 1w8o_A 199 GRTWRAGEAVGVGMDENKTVELSDGRVLLNSRDSARSGYRKVAVST-DGGHSYGPVTIDRDLPDPTNNASIIRAFPDAPA 277 (601)
T ss_dssp TSSCEECCCBCSSCCSEEEEECTTSCEEEEECCTTCCSEEEEEEES-STTSCCCCCEEEEEEECSSCCCEEEESSTTCCT
T ss_pred CcCccCCCCCCCCCCcCEEEEeCCCEEEEEEeCCCCCCCEEEEEEc-CCCCCCCCCeecCcCCCCCccceEEEecccccC
Confidence 35788776543322332 3345689998865332111222333222 22578987632 25555544444433
Q ss_pred --cCCcEEEEcCccC----CeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEE
Q 048017 189 --PDNRIIVVGGRRV----FTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFA 250 (566)
Q Consensus 189 --~dG~VyvvGG~~~----~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~G 250 (566)
.++++++++.... ....++ ... ...+|.....+... ...||.+..+.||+|+++.
T Consensus 278 ~~~~~~~l~~~~~~~~~~R~~~~l~~S~D-~G~tW~~~~~l~~~------~~~Y~~l~~~~dg~i~~~y 339 (601)
T 1w8o_A 278 GSARAKVLLFSNAASQTSRSQGTIRMSCD-DGQTWPVSKVFQPG------SMSYSTLTALPDGTYGLLY 339 (601)
T ss_dssp TCSGGGCEEEEEECCSSSSEEEEEEEESS-TTSCCCEEEEEEEE------ECCCEEEEECTTSCEEEEE
T ss_pred CCCCCCEEEEECCCCCCcccceEEEEeCC-CCCCCCCceEeCCC------CCCCCeEEEcCCCeEEEEE
Confidence 2445555654321 123344 322 24567543333221 2368898889999998764
No 231
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=30.91 E-value=1.8e+02 Score=28.42 Aligned_cols=49 Identities=8% Similarity=-0.170 Sum_probs=25.6
Q ss_pred eEEEEECC-CCcEEeCcCC---C-cccccCCeecCCCcEEEEcCCCCCCCeEEEEc
Q 048017 110 HSVLYDIA-SNTFRPLLLQ---T-DTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFT 160 (566)
Q Consensus 110 ~~~~yDp~-t~~w~~l~~~---~-~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~yd 160 (566)
.+.+||.. +++.+.+... . ...-.+.++-+||+.+.+.... ...+.+|+
T Consensus 168 ~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~--~~~v~v~~ 221 (365)
T 1jof_A 168 KLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEA--GNRICEYV 221 (365)
T ss_dssp EEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETT--TTEEEEEE
T ss_pred EEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECC--CCeEEEEE
Confidence 46788887 6766543211 1 1111223566799755554432 24666664
No 232
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=30.50 E-value=2.5e+02 Score=27.10 Aligned_cols=50 Identities=12% Similarity=-0.001 Sum_probs=35.0
Q ss_pred eEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCC
Q 048017 110 HSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPC 162 (566)
Q Consensus 110 ~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~ 162 (566)
...++|+.+++.+.+.........+....+||+.+++.... ..+.++|..
T Consensus 61 ~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~---~~l~~~d~~ 110 (388)
T 3pe7_A 61 NYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG---RNLMRVDLA 110 (388)
T ss_dssp EEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT---TEEEEEETT
T ss_pred eEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC---CeEEEEECC
Confidence 46788999999888875443322234677899877766532 578888987
No 233
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=30.08 E-value=2.8e+02 Score=31.72 Aligned_cols=82 Identities=11% Similarity=-0.003 Sum_probs=52.2
Q ss_pred eEE-EEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEe
Q 048017 110 HSV-LYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQIL 188 (566)
Q Consensus 110 ~~~-~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L 188 (566)
... +||..+++.+.+. .+.......+..+||+.++++... ..+.++|.. +.+-..+.. .......+.+.-
T Consensus 359 ~l~~~~d~~~~~~~~l~-~~~~~~~~~~~SpDG~~la~~~~~---~~v~~~d~~---tg~~~~~~~--~~~~~v~~~~~S 429 (1045)
T 1k32_A 359 DFLGIYDYRTGKAEKFE-ENLGNVFAMGVDRNGKFAVVANDR---FEIMTVDLE---TGKPTVIER--SREAMITDFTIS 429 (1045)
T ss_dssp EEEEEEETTTCCEEECC-CCCCSEEEEEECTTSSEEEEEETT---SEEEEEETT---TCCEEEEEE--CSSSCCCCEEEC
T ss_pred ceEEEEECCCCCceEec-CCccceeeeEECCCCCEEEEECCC---CeEEEEECC---CCceEEecc--CCCCCccceEEC
Confidence 355 7899888877776 333334455667899988887643 578999998 555443321 112222345556
Q ss_pred cCCcEEEEcCcc
Q 048017 189 PDNRIIVVGGRR 200 (566)
Q Consensus 189 ~dG~VyvvGG~~ 200 (566)
+||+.++.++.+
T Consensus 430 pDG~~la~~~~~ 441 (1045)
T 1k32_A 430 DNSRFIAYGFPL 441 (1045)
T ss_dssp TTSCEEEEEEEE
T ss_pred CCCCeEEEEecC
Confidence 799988877653
No 234
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=29.89 E-value=3e+02 Score=29.75 Aligned_cols=109 Identities=11% Similarity=0.084 Sum_probs=61.8
Q ss_pred EEEEeeCCeEEEEeccCCCCCCCCCCCCccccCCCCCCCcccceEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEE
Q 048017 67 HMQVLNNDKVIIFDRTDMGPSNLSLPIDKCRKEGDVGQLDCTAHSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQT 146 (566)
Q Consensus 67 h~~~l~~gkV~~~gg~~~~~s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vv 146 (566)
.....+|||.+++.....|. ....+.++|.++++......... ...+.+..+||+.+++
T Consensus 129 ~~~~SPDg~~la~~~~~~G~--------------------~~~~i~v~d~~tg~~~~~~~~~~-~~~~~~wspDg~~l~~ 187 (710)
T 2xdw_A 129 GYAFSEDGEYFAYGLSASGS--------------------DWVTIKFMKVDGAKELPDVLERV-KFSCMAWTHDGKGMFY 187 (710)
T ss_dssp EEEECTTSSEEEEEEEETTC--------------------SCEEEEEEETTTTEEEEEEEEEE-CSCCEEECTTSSEEEE
T ss_pred EEEECCCCCEEEEEEcCCCC--------------------ceEEEEEEECCCCCCCcccccCc-ccceEEEEeCCCEEEE
Confidence 34455799988887543211 01357889999999876532211 1234556679987666
Q ss_pred cCCCCC-------------CCeEEEEcCCCCCCCcccc--cCcccccccCcceEEEecCCcEEEEcCc
Q 048017 147 GGYNVG-------------DRVIRLFTPCNDEGCDWVE--LSKNLWDRRWYASNQILPDNRIIVVGGR 199 (566)
Q Consensus 147 GG~~~g-------------~~~v~~ydP~~~~t~~W~~--~~~~M~~~R~y~s~~~L~dG~VyvvGG~ 199 (566)
+..... ...+++++.. +.+... +-..-..+.+..+...-+||+.+++...
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~v~~~~l~---t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~ 252 (710)
T 2xdw_A 188 NAYPQQDGKSDGTETSTNLHQKLYYHVLG---TDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIR 252 (710)
T ss_dssp EECCCCSSCCSSSCCCCCCCCEEEEEETT---SCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred EEECCccccccccccccCCCCEEEEEECC---CCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEE
Confidence 544322 2458888877 444321 1010112445556666779987776654
No 235
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=29.43 E-value=2.3e+02 Score=29.00 Aligned_cols=59 Identities=15% Similarity=0.185 Sum_probs=33.9
Q ss_pred ccCCeecC-CCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEecCCc-EEEEc
Q 048017 132 CSSGAVLS-DGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILPDNR-IIVVG 197 (566)
Q Consensus 132 c~~~~~l~-dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~dG~-VyvvG 197 (566)
+.+.++-+ +|.||++-- +...+..||+. +..-..+.. +....|-...+.-++|+ +|++-
T Consensus 228 p~giavdp~~g~lyv~d~---~~~~V~~~~~~---~~~~~~~~~-~~~~~~P~gia~~pdG~~lyv~d 288 (430)
T 3tc9_A 228 CNGAETHPINGELYFNSW---NAGQVFRYDFT---TQETTPLFT-IQDSGWEFHIQFHPSGNYAYIVV 288 (430)
T ss_dssp CCCEEECTTTCCEEEEET---TTTEEEEEETT---TTEEEEEEE-CSSSSCCEEEEECTTSSEEEEEE
T ss_pred ceEEEEeCCCCEEEEEEC---CCCEEEEEECC---CCcEEEEEE-cCCCCcceeEEEcCCCCEEEEEE
Confidence 44556666 799998742 23579999997 443322221 22222222455556887 88764
No 236
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=29.36 E-value=1.8e+02 Score=29.18 Aligned_cols=89 Identities=13% Similarity=0.194 Sum_probs=44.5
Q ss_pred eEEEEECCCCc-EEeCcC--CCcccccCCeecCCCc-EEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccc-cccCcce
Q 048017 110 HSVLYDIASNT-FRPLLL--QTDTWCSSGAVLSDGT-LVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLW-DRRWYAS 184 (566)
Q Consensus 110 ~~~~yDp~t~~-w~~l~~--~~~~~c~~~~~l~dG~-l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~-~~R~y~s 184 (566)
.+.+||..+.. .+.+.. .+.....+....+++. ++++|+.+ ..+.+||.. +.. ..+.. +. ....-.+
T Consensus 255 ~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~d---g~v~vwd~~---~~~-~~~~~-~~~h~~~v~~ 326 (430)
T 2xyi_A 255 KLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSAD---KTVALWDLR---NLK-LKLHS-FESHKDEIFQ 326 (430)
T ss_dssp EEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETT---SEEEEEETT---CTT-SCSEE-EECCSSCEEE
T ss_pred eEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCC---CeEEEEeCC---CCC-CCeEE-eecCCCCEEE
Confidence 46788887652 111111 1111112234455665 88888764 579999987 311 11111 22 1222233
Q ss_pred EEEecCC-cEEEEcCccCCeEEEE
Q 048017 185 NQILPDN-RIIVVGGRRVFTYEFY 207 (566)
Q Consensus 185 ~~~L~dG-~VyvvGG~~~~s~E~y 207 (566)
+...++| .+++.|+.++ .+.+|
T Consensus 327 i~~sp~~~~~l~s~~~d~-~i~iw 349 (430)
T 2xyi_A 327 VQWSPHNETILASSGTDR-RLHVW 349 (430)
T ss_dssp EEECSSCTTEEEEEETTS-CCEEE
T ss_pred EEECCCCCCEEEEEeCCC-cEEEE
Confidence 4445567 5788887654 34455
No 237
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=29.16 E-value=73 Score=31.31 Aligned_cols=63 Identities=16% Similarity=0.167 Sum_probs=40.1
Q ss_pred CeecCCCcEEEEcCCCCCCCe-EEEEcCCCCCCCcccccCcccc---cccCcceEEEecCCcEEEEcCccCCeEEEE
Q 048017 135 GAVLSDGTLVQTGGYNVGDRV-IRLFTPCNDEGCDWVELSKNLW---DRRWYASNQILPDNRIIVVGGRRVFTYEFY 207 (566)
Q Consensus 135 ~~~l~dG~l~vvGG~~~g~~~-v~~ydP~~~~t~~W~~~~~~M~---~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y 207 (566)
.+.-+||+++++|+.+ .. +++||.. +.+ .+.. +. ....-.+++.-+||+.++.|+.+ .++.+|
T Consensus 201 ~~~s~~g~~l~s~s~d---~~~v~iwd~~---~~~--~~~~-~~~g~h~~~v~~~~~s~~~~~l~s~s~d-~~v~iw 267 (355)
T 3vu4_A 201 VRLNRKSDMVATCSQD---GTIIRVFKTE---DGV--LVRE-FRRGLDRADVVDMKWSTDGSKLAVVSDK-WTLHVF 267 (355)
T ss_dssp EEECTTSSEEEEEETT---CSEEEEEETT---TCC--EEEE-EECTTCCSCEEEEEECTTSCEEEEEETT-CEEEEE
T ss_pred EEECCCCCEEEEEeCC---CCEEEEEECC---CCc--EEEE-EEcCCCCCcEEEEEECCCCCEEEEEECC-CEEEEE
Confidence 4456799999999864 45 8999987 432 2222 32 22222344455689999988865 456666
No 238
>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN; 1.82A {Gallus gallus}
Probab=27.02 E-value=2.3e+02 Score=22.28 Aligned_cols=40 Identities=20% Similarity=0.137 Sum_probs=29.3
Q ss_pred CCCceeecCCccceeecCCeEEEEEEecCCCCCcceEEEEEccCcc
Q 048017 456 MRPSILSLESIDRTVSYNEVFAVTFELSSYSPSGEISVSLMTPSFT 501 (566)
Q Consensus 456 ~RP~i~~~p~~~~~~~~g~~~~v~~~~~~~~~~~~~~v~l~~~~~~ 501 (566)
++|+|...|. ..+.-|+.++++=.... ....+.+.+.+..
T Consensus 4 ~kP~i~~~p~--~~v~~G~~VtL~C~~~~----~~~~~~w~k~g~~ 43 (105)
T 2vsd_A 4 PQPSLSLHPS--QGVSLGDTVTLRCHLPR----MAAWVQLWLNGTL 43 (105)
T ss_dssp CCCEEEEESC--SSCCTTCEEEEEEECCS----SCEEEEEEETTEE
T ss_pred CCCEEEeCCC--CCcCcCCCEEEEEEcCC----CCcEEEEEECCcc
Confidence 6899998884 46889999999876443 2456778877643
No 239
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=26.66 E-value=3.3e+02 Score=29.56 Aligned_cols=25 Identities=24% Similarity=0.311 Sum_probs=18.5
Q ss_pred ecCCcEEEEEcC-eeEEEeccCCe--EE
Q 048017 241 LPDGNLFIFANR-RSILFDYINNK--LV 265 (566)
Q Consensus 241 l~~G~Ifv~Gg~-~~e~yDp~t~~--W~ 265 (566)
+.+|+||+.... .+..+|.++++ |.
T Consensus 64 v~~g~vyv~~~~~~v~AlD~~tG~~~W~ 91 (668)
T 1kv9_A 64 FHDGVIYTSMSWSRVIAVDAASGKELWR 91 (668)
T ss_dssp EETTEEEEEEGGGEEEEEETTTCCEEEE
T ss_pred EECCEEEEECCCCeEEEEECCCChhceE
Confidence 458999987653 57789998864 55
No 240
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=26.22 E-value=1.3e+02 Score=29.70 Aligned_cols=74 Identities=12% Similarity=-0.035 Sum_probs=42.7
Q ss_pred ceEEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCccc-ccccCcceEEE
Q 048017 109 AHSVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNL-WDRRWYASNQI 187 (566)
Q Consensus 109 ~~~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M-~~~R~y~s~~~ 187 (566)
..+.+||.++.+-...-.... ..+.++.+||+.+.+.+. +++.+||.. +.+-+.+.. + ..++.-...+.
T Consensus 286 ~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~----~~v~v~D~~---t~~l~~~~~-i~~~G~~P~~~~~ 355 (361)
T 2oiz_A 286 AEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG----GNVNVYDIS---QPEPKLLRT-IEGAAEASLQVQF 355 (361)
T ss_dssp SEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS----SCEEEEECS---SSSCEEEEE-ETTSCSSEEEEEE
T ss_pred ceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC----CeEEEEECC---CCcceeeEE-eccCCCCcEEEEe
Confidence 358889999987543212222 556677789886666552 689999987 541143333 3 23443233455
Q ss_pred ecCCc
Q 048017 188 LPDNR 192 (566)
Q Consensus 188 L~dG~ 192 (566)
-+||+
T Consensus 356 ~p~G~ 360 (361)
T 2oiz_A 356 HPVGG 360 (361)
T ss_dssp CCCSC
T ss_pred cCCCC
Confidence 55653
No 241
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=26.10 E-value=4e+02 Score=24.75 Aligned_cols=228 Identities=10% Similarity=0.042 Sum_probs=0.0
Q ss_pred EEEEECCCCcEEeCcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEecC
Q 048017 111 SVLYDIASNTFRPLLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILPD 190 (566)
Q Consensus 111 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~d 190 (566)
+.+|| .+++..-................+|+|++.... +..||+. ...-..... -......+... +
T Consensus 42 l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~------l~~~d~~---g~~~~~~~~-~~~~~~~~~~~---~ 107 (330)
T 3hxj_A 42 LYAIN-TDGSVKWFFKSGEIIECRPSIGKDGTIYFGSDK------VYAINPD---GTEKWRFDT-KKAIVSDFTIF---E 107 (330)
T ss_dssp TEEEC-TTSCEEESSCGGGEEEECCEETTTTEECCSSCE------EEEECCC---GGGGGGSCC------CCEEEE---T
T ss_pred EEEEC-CCCcEEEEEecCCCcccceEEecCCcEEEecCc------EEEECCC---CcEEEEEEC-CCCcccCceEE---C
Q ss_pred CcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEEc-CeeEEEeccCCeEEEee
Q 048017 191 NRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFAN-RRSILFDYINNKLVKEF 268 (566)
Q Consensus 191 G~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~Gg-~~~e~yDp~t~~W~~~~ 268 (566)
|+||+ |.....+..| +. . ...|............ ....+|+||+... ....+||++ ++.....
T Consensus 108 ~~l~v--~t~~~~l~~~d~~-g-~~~~~~~~~~~~~~~~----------~~~~~g~l~vgt~~~~l~~~d~~-g~~~~~~ 172 (330)
T 3hxj_A 108 DILYV--TSMDGHLYAINTD-G-TEKWRFKTKKAIYATP----------IVSEDGTIYVGSNDNYLYAINPD-GTEKWRF 172 (330)
T ss_dssp TEEEE--ECTTSEEEEECTT-S-CEEEEEECSSCCCSCC----------EECTTSCEEEECTTSEEEEECTT-SCEEEEE
T ss_pred CEEEE--EecCCEEEEEcCC-C-CEEEEEcCCCceeeee----------EEcCCCEEEEEcCCCEEEEECCC-CCEeEEE
Q ss_pred cccCCCCCCccCCCCceeeecccccCCCCCCCCCCCCCCEEEEEcCCCCCccccccccccccccCCeeEEEEeeCCCCCe
Q 048017 269 PVIPGNDKRNYPSTGSSILLPVKLSAGSDGNGTAALPDAEVMVCGGAPAGAFIKSDKESVYVEASRTCGRLKVTDKYPVW 348 (566)
Q Consensus 269 p~lp~~~~r~~~~~g~avllpl~~~~~~~~~~y~~~~~gkI~v~GG~~~~~~~~~~~~~~~~pa~~s~~~~d~~~~~~~W 348 (566)
. .......+.+.-+ ++.|++.. .. +.++| ......|
T Consensus 173 ~-------~~~~~~~~~~~d~----------------~g~l~v~t-~~-------------------l~~~d-~~g~~~~ 208 (330)
T 3hxj_A 173 K-------TNDAITSAASIGK----------------DGTIYFGS-DK-------------------VYAIN-PDGTEKW 208 (330)
T ss_dssp E-------CSSCCCSCCEECT----------------TCCEEEES-SS-------------------EEEEC-TTSCEEE
T ss_pred e-------cCCCceeeeEEcC----------------CCEEEEEe-CE-------------------EEEEC-CCCcEEE
Q ss_pred EEe-ccCCCcccceeEEccCCeEEEEcCCCCCCCCCccccCc--CCcEEeccCCCCCCcceeEEEEcCCCcEEEecCC
Q 048017 349 SME-FMPMPRVMSDMLLLPSGDVIIINGASNGTAGWEDAEEP--DRRFVVLNPSKIPRMYHSSAVVLPDGRILVGGSN 423 (566)
Q Consensus 349 ~~~-~M~~~R~~~~~vvLpdG~V~vvGG~~~g~~~~~~~ydP--t~~Wt~~~~~~~~R~yhs~a~LlpdG~V~v~GG~ 423 (566)
+.. .- ....+.++-.+|+||+..-.. + ..++|+ ...|+.-........ .++..+|+||++..+
T Consensus 209 ~~~~~~---~~~~~~~~~~~g~l~v~t~~~-g----l~~~~~~g~~~~~~~~~~~~~~~----~~~~~~g~l~v~t~~ 274 (330)
T 3hxj_A 209 NFYAGY---WTVTRPAISEDGTIYVTSLDG-H----LYAINPDGTEKWRFKTGKRIESS----PVIGNTDTIYFGSYD 274 (330)
T ss_dssp EECCSS---CCCSCCEECTTSCEEEEETTT-E----EEEECTTSCEEEEEECSSCCCSC----CEECTTSCEEEECTT
T ss_pred EEccCC---cceeceEECCCCeEEEEcCCC-e----EEEECCCCCEeEEeeCCCCcccc----ceEcCCCeEEEecCC
No 242
>2b4w_A Hypothetical protein, conserved; structural genomics, PSI, protein structure initiative, structural genomics of pathogenic protozoa consortium; 1.98A {Leishmania major} SCOP: b.67.2.5
Probab=25.81 E-value=2.7e+02 Score=27.29 Aligned_cols=99 Identities=18% Similarity=0.185 Sum_probs=55.0
Q ss_pred eeCCeEEEEeccCCCC-CCCCCCCCccccCCCCCCCcccceEEEEEC-CCCcEEeCcCC----CcccccCCeecCCCcEE
Q 048017 71 LNNDKVIIFDRTDMGP-SNLSLPIDKCRKEGDVGQLDCTAHSVLYDI-ASNTFRPLLLQ----TDTWCSSGAVLSDGTLV 144 (566)
Q Consensus 71 l~~gkV~~~gg~~~~~-s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp-~t~~w~~l~~~----~~~~c~~~~~l~dG~l~ 144 (566)
..+||.++.|+.|... |. ..++..|-- ..++|++++.+ .++|- +-.+|.+
T Consensus 38 ~~~Gk~~I~GRVE~Rd~se-------------------~S~V~fFeet~~d~w~~v~~~~~~LqDPF~----t~I~gEl- 93 (315)
T 2b4w_A 38 SYKGKTHIYGRVEKRDIWA-------------------ASHVRLFEETGKDEFTAVPELSWELEDPYI----AKINNEM- 93 (315)
T ss_dssp EETTEEEEEEEEECTTCSS-------------------CCEEEEEEEEETTEEEECTTCCBSCEEEEE----EEETTEE-
T ss_pred eECCEEEEEeeeecCCCcc-------------------ccEEEEEEEcCCCceEECCCCEEEecCccE----EEECCEE-
Confidence 3699999999988432 11 135666755 78999988763 23442 2235555
Q ss_pred EEcCCC---CC---CC-eEEEEcCCCCCCCcccccCcccccccCcceEEEecCCcEEEEc
Q 048017 145 QTGGYN---VG---DR-VIRLFTPCNDEGCDWVELSKNLWDRRWYASNQILPDNRIIVVG 197 (566)
Q Consensus 145 vvGG~~---~g---~~-~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L~dG~VyvvG 197 (566)
++||-. +. +. ....|--..++-......|+.|..-| .+.|.||+|-|.-
T Consensus 94 i~GGveV~~~~~~~l~wrt~FYrG~~~~L~~F~~GPd~MKDIR----lveL~DGrIgVfT 149 (315)
T 2b4w_A 94 IFGGTRVRKNGNAILSYYGYFYRGTPDELTYFTRGPGCMKDIR----VLQLQDGRLGVFS 149 (315)
T ss_dssp EEEEEEEC-----CCCEEEEEEEEETTEEEEEEECCTTCCCCE----EEECTTSCEEEEE
T ss_pred EeeeEEEEeCCCCeeEEEEEEEccChHHeeeeccCCcccceeE----EEEecCCeEeeee
Confidence 456631 10 11 11122111000112334455588878 6889999998874
No 243
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=25.31 E-value=3.9e+02 Score=24.37 Aligned_cols=138 Identities=16% Similarity=0.064 Sum_probs=69.3
Q ss_pred EEEEECCCCcEEeCcCCCcccccCCeecC-CCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEe-
Q 048017 111 SVLYDIASNTFRPLLLQTDTWCSSGAVLS-DGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQIL- 188 (566)
Q Consensus 111 ~~~yDp~t~~w~~l~~~~~~~c~~~~~l~-dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L- 188 (566)
+.++|+....-+.+.........+.++-+ +|+||++-... ....++++++. ...-..+.. ..-..+...++
T Consensus 103 I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~-~~~~I~~~~~d---g~~~~~~~~---~~~~~P~gia~d 175 (267)
T 1npe_A 103 IEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNR-DNPKIETSHMD---GTNRRILAQ---DNLGLPNGLTFD 175 (267)
T ss_dssp EEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCS-SSCEEEEEETT---SCCCEEEEC---TTCSCEEEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCC-CCcEEEEEecC---CCCcEEEEE---CCCCCCcEEEEc
Confidence 56677754433222111111223344455 58899885321 13578888876 322111111 11123434444
Q ss_pred cC-CcEEEEcCccCCeEEEE-eCCCCCCCeeeeccccccCCCCCCCCccceEEEecCCcEEEEE--cCeeEEEeccCCeE
Q 048017 189 PD-NRIIVVGGRRVFTYEFY-PKIDSLSSSLYLRFLIETRDPGEENNLYPFLHLLPDGNLFIFA--NRRSILFDYINNKL 264 (566)
Q Consensus 189 ~d-G~VyvvGG~~~~s~E~y-P~~~~~~~w~~~p~l~~~~d~~~~~~~yp~~~~l~~G~Ifv~G--g~~~e~yDp~t~~W 264 (566)
++ +++|+.--.. ..+.++ +.. ... ...... ..+|.....-+++||+.- +....++|+.+++.
T Consensus 176 ~~~~~lyv~d~~~-~~I~~~~~~g----~~~-~~~~~~--------~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~ 241 (267)
T 1npe_A 176 AFSSQLCWVDAGT-HRAECLNPAQ----PGR-RKVLEG--------LQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKE 241 (267)
T ss_dssp TTTTEEEEEETTT-TEEEEEETTE----EEE-EEEEEC--------CCSEEEEEEETTEEEEEETTTTEEEEEETTTTEE
T ss_pred CCCCEEEEEECCC-CEEEEEecCC----Cce-EEEecC--------CCCceEEEEeCCEEEEEECCCCeEEEEeCCCCCc
Confidence 33 6788875432 345555 321 111 111110 135666655678899874 35788999999887
Q ss_pred EEeec
Q 048017 265 VKEFP 269 (566)
Q Consensus 265 ~~~~p 269 (566)
.+.++
T Consensus 242 ~~~i~ 246 (267)
T 1npe_A 242 MDTFH 246 (267)
T ss_dssp EEEEC
T ss_pred eEEEc
Confidence 65554
No 244
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=24.99 E-value=3e+02 Score=26.62 Aligned_cols=69 Identities=10% Similarity=-0.015 Sum_probs=34.9
Q ss_pred CCe-ecCCCcEEEEcCCCCC---CCeEEEEcCCCCCCCcccccCccc----ccccCcceEEEec---CCcEEEEcCccCC
Q 048017 134 SGA-VLSDGTLVQTGGYNVG---DRVIRLFTPCNDEGCDWVELSKNL----WDRRWYASNQILP---DNRIIVVGGRRVF 202 (566)
Q Consensus 134 ~~~-~l~dG~l~vvGG~~~g---~~~v~~ydP~~~~t~~W~~~~~~M----~~~R~y~s~~~L~---dG~VyvvGG~~~~ 202 (566)
+.+ +-+||+.+.++..... ...+.+|+... +.+.+...... ..+++ .+.-+ ||+.+++++.+..
T Consensus 258 ~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~--~g~~~~~~~~~~~~~~~~~~---~a~sp~~~dg~~l~v~~~~~~ 332 (365)
T 1jof_A 258 DVCALTFSGKYMFASSRANKFELQGYIAGFKLRD--CGSIEKQLFLSPTPTSGGHS---NAVSPCPWSDEWMAITDDQEG 332 (365)
T ss_dssp EEEEECTTSSEEEEEEEESSTTSCCEEEEEEECT--TSCEEEEEEEEECSSCCTTC---CCEEECTTCTTEEEEECSSSC
T ss_pred cEEEECCCCCEEEEECCCCCCCCCCeEEEEEECC--CCCEEEeeeeeecCCCCccc---ceecCCCcCCCEEEEEEcCCC
Confidence 345 6689986555433211 12788888641 23333211001 12232 33345 6877777766555
Q ss_pred eEEEE
Q 048017 203 TYEFY 207 (566)
Q Consensus 203 s~E~y 207 (566)
.+.+|
T Consensus 333 ~v~v~ 337 (365)
T 1jof_A 333 WLEIY 337 (365)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 66666
No 245
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=22.53 E-value=3e+02 Score=27.71 Aligned_cols=64 Identities=22% Similarity=0.300 Sum_probs=37.9
Q ss_pred cceeEEccCCeEEEEcCCCCCCCCCcc----ccCc------CCcEEeccCCCCCCcceeEEEEcCCCcEEEecCCCCcc
Q 048017 359 MSDMLLLPSGDVIIINGASNGTAGWED----AEEP------DRRFVVLNPSKIPRMYHSSAVVLPDGRILVGGSNPHRR 427 (566)
Q Consensus 359 ~~~~vvLpdG~V~vvGG~~~g~~~~~~----~ydP------t~~Wt~~~~~~~~R~yhs~a~LlpdG~V~v~GG~~~~~ 427 (566)
.|.+++.-||+||..|-...|.-+... ...| .++...++ .-.+|+.| |..||+||.-|.+..+.
T Consensus 304 ~ht~alt~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~~v~~ia----~G~~hs~a-lt~~G~v~~wG~n~~Gq 377 (423)
T 3mvd_K 304 HHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEKIVSVG----CGEVCSYA-VTIDGKLYSWGSGVNNQ 377 (423)
T ss_dssp SEEEEEETTCCEEEEECCGGGTTCSSSCCSCEEEEEECTTCCSCEEEEE----EETTEEEE-EETTSCEEEEECCTTSC
T ss_pred CeEEEEeCCCcEEEEECCCCCCCCCCCccccccCceEeccCCCCEEEEE----cCCCeEEE-EcCCCCEEEECCCCCCC
Confidence 456677779999999965444322211 1122 12233222 12467655 56899999999887653
No 246
>3kgr_A LAIR-1, hlair1, leukocyte-associated immunoglobulin-like receptor; IG-like domain, cell membrane, glycoprotein; 1.80A {Homo sapiens} PDB: 3rp1_A
Probab=22.32 E-value=1.6e+02 Score=23.38 Aligned_cols=41 Identities=20% Similarity=0.148 Sum_probs=31.5
Q ss_pred CCCceeecCCccceeecCCeEEEEEEecCCCCCcceEEEEEccCccc
Q 048017 456 MRPSILSLESIDRTVSYNEVFAVTFELSSYSPSGEISVSLMTPSFTT 502 (566)
Q Consensus 456 ~RP~i~~~p~~~~~~~~g~~~~v~~~~~~~~~~~~~~v~l~~~~~~T 502 (566)
+||.|..-|. ..|..|+.+|++=.... ...++.|.+-|...
T Consensus 8 pkPsL~a~P~--~vv~~G~~VtL~C~~~~----~~~~f~l~k~g~~~ 48 (106)
T 3kgr_A 8 PRPSISAEPG--TVIPLGSHVTFVCRGPV----GVQTFRLERESRST 48 (106)
T ss_dssp CCCEEEEESC--SEEETTCCEEEEEEECT----TCCEEEEEEGGGTE
T ss_pred CCCEEEEeCC--CccCCCCeEEEEEEccC----CCcEEEEEECCCcc
Confidence 6999999985 66889999999876442 34579999887654
No 247
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=21.38 E-value=3.3e+02 Score=29.09 Aligned_cols=88 Identities=10% Similarity=0.052 Sum_probs=49.2
Q ss_pred eEEEEECCCCcEEe-CcCCCcccccCCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCcccccccCcceEEEe
Q 048017 110 HSVLYDIASNTFRP-LLLQTDTWCSSGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSKNLWDRRWYASNQIL 188 (566)
Q Consensus 110 ~~~~yDp~t~~w~~-l~~~~~~~c~~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~~M~~~R~y~s~~~L 188 (566)
.+.++|+++++... ++.-... ++.++.+||+.+.+++. ...+.+||.. ..+-..+.. +..+. .+....+
T Consensus 178 ~V~viD~~t~~v~~~i~~g~~p--~~v~~SpDGr~lyv~~~---dg~V~viD~~---~~t~~~v~~-i~~G~-~P~~ia~ 247 (567)
T 1qks_A 178 QIALIDGSTYEIKTVLDTGYAV--HISRLSASGRYLFVIGR---DGKVNMIDLW---MKEPTTVAE-IKIGS-EARSIET 247 (567)
T ss_dssp EEEEEETTTCCEEEEEECSSCE--EEEEECTTSCEEEEEET---TSEEEEEETT---SSSCCEEEE-EECCS-EEEEEEE
T ss_pred eEEEEECCCCeEEEEEeCCCCc--cceEECCCCCEEEEEcC---CCeEEEEECC---CCCCcEeEE-EecCC-CCceeEE
Confidence 57889999887543 3322111 24556679886555543 2479999984 122223332 33332 2333444
Q ss_pred c-----CCcEEEEcCccCCeEEEE
Q 048017 189 P-----DNRIIVVGGRRVFTYEFY 207 (566)
Q Consensus 189 ~-----dG~VyvvGG~~~~s~E~y 207 (566)
. ||+.+.++.....++.++
T Consensus 248 s~~~~pDGk~l~v~n~~~~~v~Vi 271 (567)
T 1qks_A 248 SKMEGWEDKYAIAGAYWPPQYVIM 271 (567)
T ss_dssp CCSTTCTTTEEEEEEEETTEEEEE
T ss_pred ccccCCCCCEEEEEEccCCeEEEE
Confidence 4 887777766655566666
No 248
>1zxq_A ICAM-2, intercellular adhesion molecule-2; immunoglobulin fold, cell adhesion, glycoprotein, transmembr; HET: NAG; 2.20A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=21.28 E-value=1.5e+02 Score=27.05 Aligned_cols=51 Identities=10% Similarity=0.255 Sum_probs=38.5
Q ss_pred cceEEEEeccccCCCCCCCCCceeecCCccceeecCCeEEEEEEecCCCCCcceEEEEEccC
Q 048017 438 DLSLEAFHPHYLDPENAYMRPSILSLESIDRTVSYNEVFAVTFELSSYSPSGEISVSLMTPS 499 (566)
Q Consensus 438 ~~~vE~y~Ppyl~~~~~~~RP~i~~~p~~~~~~~~g~~~~v~~~~~~~~~~~~~~v~l~~~~ 499 (566)
..+|++|.|| .+|.|...| ..+.-|+.++|+=..++-.+.+-..++|+|-.
T Consensus 79 ~~~itVy~~P--------~~v~i~~~p---~~~~~G~~~tL~C~v~~v~P~~~L~v~llrG~ 129 (192)
T 1zxq_A 79 NSNVSVYQPP--------RQVILTLQP---TLVAVGKSFTIECRVPTVEPLDSLTLFLFRGN 129 (192)
T ss_dssp EEEEEECBCC--------CCCEEEEES---SEECTTSEEEEEEEECSCBCGGGEEEEEEETT
T ss_pred EEEEEEEeCC--------CCceEccCC---ccccCCCcEEEEEEeCCeECCCCcEEEEEcCC
Confidence 4579999876 488888778 77999999999988765333345678888743
No 249
>2xzi_A KDNAse, extracellular sialidase/neuraminidase, putative; hydrolase; HET: KDM; 1.45A {Aspergillus fumigatus} PDB: 2xcy_A* 2xzj_A* 2xzk_A*
Probab=21.26 E-value=2.5e+02 Score=28.20 Aligned_cols=120 Identities=16% Similarity=0.062 Sum_probs=58.3
Q ss_pred CceEEccCCCccceeEEEEeeCCeEEEEeccCCCCCCCCCCCCccccCCCCCCCcccceEEEEECCCCcEEeCc---CCC
Q 048017 52 GQWVLLQSSIGISAMHMQVLNNDKVIIFDRTDMGPSNLSLPIDKCRKEGDVGQLDCTAHSVLYDIASNTFRPLL---LQT 128 (566)
Q Consensus 52 g~W~~l~~~~~~~a~h~~~l~~gkV~~~gg~~~~~s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~---~~~ 128 (566)
.+|+.........-.+.+-+.+|+|+++-.... |..| ...+.-| .+|+... .+.
T Consensus 216 ~tW~~~~~~~~~~e~~vve~~dG~L~~~~r~~~---------g~~r-----------~v~~S~D---~tWt~~~~~~~l~ 272 (386)
T 2xzi_A 216 RTWSVQRLSGAGAEGTIVQTPDGKLYRNDRPSQ---------KGYR-----------MVARGTL---EGFGAFAPDAGLP 272 (386)
T ss_dssp CEEEEEECTTCCSSEEEEECTTSCEEEEECCSS---------SEEE-----------EEEEEET---TEECCCEEEEEEE
T ss_pred CcccccCcCCCCCcCEEEEeCCCcEEEEEeCCC---------CccE-----------EEEEEeC---CccCcccccCCCC
Confidence 578865432222223344446889888866531 1001 1123334 7787654 233
Q ss_pred cccccCCeecC---CCcEEEEcCCC--CCCCeEEEEcCCCCC-CCcccccCccccc-c-------cCcceEEEecCCcEE
Q 048017 129 DTWCSSGAVLS---DGTLVQTGGYN--VGDRVIRLFTPCNDE-GCDWVELSKNLWD-R-------RWYASNQILPDNRII 194 (566)
Q Consensus 129 ~~~c~~~~~l~---dG~l~vvGG~~--~g~~~v~~ydP~~~~-t~~W~~~~~~M~~-~-------R~y~s~~~L~dG~Vy 194 (566)
+..|.++.... +..++++..-. .......++=- +|+ ..+|..... +.. + -.|++.+.++||+|+
T Consensus 273 ~~~~~~~~i~~~~~~~~~ll~~~p~~~~~R~~l~l~~S-~D~~G~tW~~~~~-~~~g~~~~~~~~~~ys~l~~~~dg~l~ 350 (386)
T 2xzi_A 273 DPACQGSVLRYNSDAPARTIFLNSASGTSRRAMRVRIS-YDADAKKFNYGRK-LEDAKVSGAGHEGGYSSMTKTGDYKIG 350 (386)
T ss_dssp ECSCCCEEEEEESSSSCEEEEEEECSSSCSCCEEEEEE-CSTTCCCCCCCEE-GGGGCCSSSCEEEEEEEEEECTTSCEE
T ss_pred CCCCccEEEEecCCCCCEEEEECCCCCCCCcceEEEEE-cCCCCCccCCceE-EecCCccccCCceEeceeEECCCCEEE
Confidence 44566554433 34455554211 11122322211 122 467876432 222 2 347777778899988
Q ss_pred EE
Q 048017 195 VV 196 (566)
Q Consensus 195 vv 196 (566)
++
T Consensus 351 ~l 352 (386)
T 2xzi_A 351 AL 352 (386)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 250
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=20.74 E-value=4.8e+02 Score=27.73 Aligned_cols=76 Identities=11% Similarity=-0.058 Sum_probs=46.7
Q ss_pred EEEEeeCCeEEEEeccCCCCCCCCCCCCccccCCCCCCCcccceEEEEECCCCcEEeCcCCC--cccccCCeecCCCcEE
Q 048017 67 HMQVLNNDKVIIFDRTDMGPSNLSLPIDKCRKEGDVGQLDCTAHSVLYDIASNTFRPLLLQT--DTWCSSGAVLSDGTLV 144 (566)
Q Consensus 67 h~~~l~~gkV~~~gg~~~~~s~~~~p~G~~~~~~~~~~~~~~~~~~~yDp~t~~w~~l~~~~--~~~c~~~~~l~dG~l~ 144 (566)
..++-+|||.++++..+...- + .+......+||.++++.+.+.... .......+..+||+.+
T Consensus 65 ~~~~SpDg~~l~~~~~~~~~~---------~-------~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~l 128 (723)
T 1xfd_A 65 RYEISPDREYALFSYNVEPIY---------Q-------HSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQL 128 (723)
T ss_dssp EEEECTTSSEEEEEESCCCCS---------S-------SCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCE
T ss_pred eEEECCCCCEEEEEecCccce---------e-------ecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEE
Confidence 345557999887775431100 0 001245789999999877776432 2223345667899877
Q ss_pred EEcCCCCCCCeEEEEcCC
Q 048017 145 QTGGYNVGDRVIRLFTPC 162 (566)
Q Consensus 145 vvGG~~~g~~~v~~ydP~ 162 (566)
+++.. ..+.++|..
T Consensus 129 a~~~~----~~i~~~~~~ 142 (723)
T 1xfd_A 129 IFIFE----NNIYYCAHV 142 (723)
T ss_dssp EEEET----TEEEEESSS
T ss_pred EEEEC----CeEEEEECC
Confidence 77653 468888877
No 251
>3bn3_B ICAM-5, intercellular adhesion molecule 5, telencephalin; I domain, integrin, allosteric mobility, cell adhesi immune system; HET: NAG; 2.10A {Homo sapiens}
Probab=20.73 E-value=3.4e+02 Score=24.67 Aligned_cols=52 Identities=13% Similarity=0.249 Sum_probs=38.3
Q ss_pred cceEEEEeccccCCCCCCCCCceeecCCccceeecCCeEEEEEEecCCCCCcceEEEEEccCc
Q 048017 438 DLSLEAFHPHYLDPENAYMRPSILSLESIDRTVSYNEVFAVTFELSSYSPSGEISVSLMTPSF 500 (566)
Q Consensus 438 ~~~vE~y~Ppyl~~~~~~~RP~i~~~p~~~~~~~~g~~~~v~~~~~~~~~~~~~~v~l~~~~~ 500 (566)
..+|++|.+| .+|.|...| ..+.-|+.++|+=...+..+.....|+|+|-.-
T Consensus 80 ~v~l~Vy~~P--------~~v~i~~~~---~~~~~G~~~tL~C~v~~~~P~~~L~i~wlkg~~ 131 (196)
T 3bn3_B 80 RGLIRTFQRP--------DRVELMPLP---PWQPVGENFTLSCRVPGAGPRASLTLTLLRGAQ 131 (196)
T ss_dssp ECEEEEEBCC--------CCCEECCCC---SSEETTSEEEEEEEETTCBCGGGEEEEEEETTE
T ss_pred EEEEEEecCC--------CcCEEccCC---ccccCCCcEEEEEEeCCccCCCCcEEEEEeCCE
Confidence 4579999886 367787777 778999999999887654332446688888653
No 252
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=20.50 E-value=8.3e+02 Score=26.38 Aligned_cols=83 Identities=10% Similarity=0.052 Sum_probs=41.9
Q ss_pred EEEEECCCCc--EEeCcCCC-----ccccc---CCeecCCCcEEEEcCCCCCCCeEEEEcCCCCCCCcccccCc-ccccc
Q 048017 111 SVLYDIASNT--FRPLLLQT-----DTWCS---SGAVLSDGTLVQTGGYNVGDRVIRLFTPCNDEGCDWVELSK-NLWDR 179 (566)
Q Consensus 111 ~~~yDp~t~~--w~~l~~~~-----~~~c~---~~~~l~dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W~~~~~-~M~~~ 179 (566)
+..+|.+|++ |+.-.... ..+|. .+..+.+++||+.... ..+..+|..+. ...|+.-.. .....
T Consensus 89 v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~d----g~l~alD~~tG-~~~W~~~~~~~~~~~ 163 (677)
T 1kb0_A 89 VHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWD----GRLIALDAATG-KEVWHQNTFEGQKGS 163 (677)
T ss_dssp EEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTT----SEEEEEETTTC-CEEEEEETTTTCCSS
T ss_pred EEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCC----CEEEEEECCCC-CEEeeecCCcCcCcC
Confidence 5678888775 76543221 11221 2344557777776432 46888998732 345865321 00000
Q ss_pred cCcceEEEecCCcEEEEcC
Q 048017 180 RWYASNQILPDNRIIVVGG 198 (566)
Q Consensus 180 R~y~s~~~L~dG~VyvvGG 198 (566)
....+..++.+|+||+..+
T Consensus 164 ~~~~~~p~v~~~~v~v~~~ 182 (677)
T 1kb0_A 164 LTITGAPRVFKGKVIIGNG 182 (677)
T ss_dssp CBCCSCCEEETTEEEECCB
T ss_pred cccccCcEEECCEEEEEec
Confidence 1112223344788877543
No 253
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=20.29 E-value=5.3e+02 Score=26.15 Aligned_cols=60 Identities=13% Similarity=0.041 Sum_probs=34.2
Q ss_pred cccCCeecC-CCcEEEEcCCCCCCCeEEEEcCCCCCCCcc-cccCcccccccCcceEEEecCCc-EEEEc
Q 048017 131 WCSSGAVLS-DGTLVQTGGYNVGDRVIRLFTPCNDEGCDW-VELSKNLWDRRWYASNQILPDNR-IIVVG 197 (566)
Q Consensus 131 ~c~~~~~l~-dG~l~vvGG~~~g~~~v~~ydP~~~~t~~W-~~~~~~M~~~R~y~s~~~L~dG~-VyvvG 197 (566)
++.+.++-+ +|.||+.-- +...++.||+. +.+- +.+.. .....|....+.-++|+ +|+.=
T Consensus 229 ~P~giavd~~~G~lyv~d~---~~~~V~~~d~~---~g~~~~~~~~-~~~~~~~~~ia~dpdG~~LYvad 291 (433)
T 4hw6_A 229 GAKTCAVHPQNGKIYYTRY---HHAMISSYDPA---TGTLTEEEVM-MDTKGSNFHIVWHPTGDWAYIIY 291 (433)
T ss_dssp SBCCCEECTTTCCEEECBT---TCSEEEEECTT---TCCEEEEEEE-CSCCSSCEEEEECTTSSEEEEEE
T ss_pred CCCEEEEeCCCCeEEEEEC---CCCEEEEEECC---CCeEEEEEec-cCCCCCcccEEEeCCCCEEEEEe
Confidence 345566666 799998742 23579999997 4443 22211 11122333455556776 77763
Done!