BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048030
(93 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255579369|ref|XP_002530529.1| RNA binding protein, putative [Ricinus communis]
gi|223529933|gb|EEF31861.1| RNA binding protein, putative [Ricinus communis]
Length = 127
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 66/88 (75%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF TT + L +AFSQ+GQV EATI+ D+ +RSKG+G+VTF++E+EA AL++MNGK L
Sbjct: 38 LSFYTTDKGLTEAFSQYGQVVEATIVSDRVLDRSKGFGFVTFASEDEAHNALSEMNGKTL 97
Query: 61 DGRVIFVDNVRPSRRYNTDAPLARQLPQ 88
+GRVI+VD +P + P+AR P+
Sbjct: 98 NGRVIYVDYAKPRTDSRNEVPIARGPPE 125
>gi|359482021|ref|XP_002276063.2| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Vitis vinifera]
gi|297740158|emb|CBI30340.3| unnamed protein product [Vitis vinifera]
Length = 133
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 66/88 (75%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF TT++ L++ FSQ+GQV EA I+MD+ +RSKG+G+VTF++EEEAQKA +M+GK L
Sbjct: 41 LSFYTTEKGLSEHFSQYGQVVEAKIVMDRVSDRSKGFGFVTFASEEEAQKARTEMDGKEL 100
Query: 61 DGRVIFVDNVRPSRRYNTDAPLARQLPQ 88
+GR IFVD +P + P+AR P+
Sbjct: 101 NGRTIFVDYAKPRADFGGGMPIARGPPE 128
>gi|351724633|ref|NP_001238088.1| uncharacterized protein LOC100527061 [Glycine max]
gi|255631468|gb|ACU16101.1| unknown [Glycine max]
Length = 113
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 59/74 (79%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++FSTT+E LA AFSQ+G V +A II++K KNRSKG+GYV F+ EEEA KA DMNGK+L
Sbjct: 40 LAFSTTEEELAKAFSQYGSVLKANIILNKAKNRSKGFGYVIFAKEEEACKAQIDMNGKIL 99
Query: 61 DGRVIFVDNVRPSR 74
GRVI+VD P++
Sbjct: 100 HGRVIYVDVQLPNK 113
>gi|224091949|ref|XP_002309412.1| predicted protein [Populus trichocarpa]
gi|222855388|gb|EEE92935.1| predicted protein [Populus trichocarpa]
Length = 139
Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 66/88 (75%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S TT+ L++AFSQ+GQV EA I+MD+ +RSKG+G+VT+++E+EAQKAL +MNGK L
Sbjct: 46 LSIYTTENGLSEAFSQYGQVVEAKIVMDRALDRSKGFGFVTYASEDEAQKALDEMNGKAL 105
Query: 61 DGRVIFVDNVRPSRRYNTDAPLARQLPQ 88
+GRVI+VD + + P+AR P+
Sbjct: 106 NGRVIYVDYAKLKTNFGGGIPIARGPPE 133
>gi|388502672|gb|AFK39402.1| unknown [Medicago truncatula]
Length = 140
Score = 97.8 bits (242), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 66/88 (75%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF TT++ L+DAFS +GQV EA +I D+ +SKGYG+VTF++++EA+KA+ +MN K L
Sbjct: 39 LSFHTTEKTLSDAFSNYGQVVEAKVITDRISEKSKGYGFVTFASQDEAEKAITEMNEKAL 98
Query: 61 DGRVIFVDNVRPSRRYNTDAPLARQLPQ 88
+GRV+FVD +P + + P+AR P+
Sbjct: 99 NGRVVFVDYAKPDTKRSMGMPIARGPPE 126
>gi|255565709|ref|XP_002523844.1| Cold-inducible RNA-binding protein, putative [Ricinus communis]
gi|223536932|gb|EEF38570.1| Cold-inducible RNA-binding protein, putative [Ricinus communis]
Length = 121
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/70 (61%), Positives = 56/70 (80%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SFS+T E L +AFS+FG++ E II DK +R KGY YVTF+TE EA+KAL +MNGK++
Sbjct: 41 ISFSSTTESLTEAFSKFGEIVEVNIIKDKAMDRPKGYAYVTFATENEAKKALTEMNGKVI 100
Query: 61 DGRVIFVDNV 70
DGR +FVDNV
Sbjct: 101 DGRPVFVDNV 110
>gi|449462934|ref|XP_004149190.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 134
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 67/88 (76%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ TT + L++AFSQ+GQV EAT++MD+ ++SKG+G+VTF++ +EA AL++MNGK L
Sbjct: 42 LSYYTTDKGLSEAFSQYGQVIEATVVMDRVSDKSKGFGFVTFASLDEAHTALSEMNGKPL 101
Query: 61 DGRVIFVDNVRPSRRYNTDAPLARQLPQ 88
+GRVIFV+ +P+ P+AR P+
Sbjct: 102 NGRVIFVNYAKPTTSSRGAIPIARGPPE 129
>gi|449500867|ref|XP_004161215.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 134
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 67/88 (76%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ TT + L++AFSQ+GQV EAT++MD+ ++SKG+G+VTF++ +EA AL++MNGK L
Sbjct: 42 LSYYTTDKGLSEAFSQYGQVIEATVVMDRVSDKSKGFGFVTFASLDEAHTALSEMNGKPL 101
Query: 61 DGRVIFVDNVRPSRRYNTDAPLARQLPQ 88
+GRVIFV+ +P+ P+AR P+
Sbjct: 102 NGRVIFVNYAKPTTSSRGAIPIARGPPE 129
>gi|359479548|ref|XP_003632289.1| PREDICTED: cold-inducible RNA-binding protein-like [Vitis vinifera]
gi|296084877|emb|CBI28286.3| unnamed protein product [Vitis vinifera]
Length = 111
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 57/68 (83%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SFSTT++ LA+AFSQFG+V EA IIMDK K R KG+ YVTF+ E+EA+KAL +MNGK++
Sbjct: 41 ISFSTTEKTLAEAFSQFGEVVEAKIIMDKRKLRPKGFAYVTFTREDEAEKALTEMNGKVV 100
Query: 61 DGRVIFVD 68
DGR + VD
Sbjct: 101 DGRTVLVD 108
>gi|351725383|ref|NP_001238370.1| uncharacterized protein LOC100527079 [Glycine max]
gi|255631508|gb|ACU16121.1| unknown [Glycine max]
Length = 130
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 65/88 (73%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF TT+ L++AFS +GQV EA I+ D+ +RSKG+G+VTF++++EA+ A+ DM GK L
Sbjct: 36 LSFYTTENALSEAFSNYGQVIEAKIVTDRVSDRSKGFGFVTFASQDEAENAIEDMKGKTL 95
Query: 61 DGRVIFVDNVRPSRRYNTDAPLARQLPQ 88
+GRVIFVD +P+ + P+AR P+
Sbjct: 96 NGRVIFVDYAKPNINTRGEIPIARGPPE 123
>gi|357457753|ref|XP_003599157.1| Cold-inducible RNA-binding protein [Medicago truncatula]
gi|355488205|gb|AES69408.1| Cold-inducible RNA-binding protein [Medicago truncatula]
Length = 134
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 60/77 (77%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++FSTT+E LA+AFSQ+G V +A I+++K K R KG+GYVTF+ EEEA+KA MNGK+L
Sbjct: 39 LAFSTTEEKLAEAFSQYGNVVKADIVLNKAKKRCKGFGYVTFAEEEEARKAQIGMNGKIL 98
Query: 61 DGRVIFVDNVRPSRRYN 77
GRV++VD P+ + N
Sbjct: 99 HGRVLYVDMDPPNEQKN 115
>gi|116781215|gb|ABK22008.1| unknown [Picea sitchensis]
Length = 140
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 64/87 (73%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF TT++ L +AFS+FG+V E ++MD+ RSKG+G+V +++E +A++A A+MNGK+L
Sbjct: 39 LSFYTTEKALTEAFSRFGEVVEVKVVMDRVSQRSKGFGFVQYASEADAERAKAEMNGKVL 98
Query: 61 DGRVIFVDNVRPSRRYNTDAPLARQLP 87
GR+IFVD V+P + + D P A P
Sbjct: 99 SGRIIFVDTVKPKSQLSGDLPSATVPP 125
>gi|297806641|ref|XP_002871204.1| hypothetical protein ARALYDRAFT_487428 [Arabidopsis lyrata subsp.
lyrata]
gi|297317041|gb|EFH47463.1| hypothetical protein ARALYDRAFT_487428 [Arabidopsis lyrata subsp.
lyrata]
Length = 144
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 65/92 (70%), Gaps = 1/92 (1%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF TT++ L++AFS+ GQV EA I+MD+ +RSKG+G+VTF++ +EAQKAL + NG+
Sbjct: 41 LSFCTTEQGLSEAFSKCGQVVEAQIVMDRVSDRSKGFGFVTFASVDEAQKALMEFNGQQF 100
Query: 61 DGRVIFVDNVRPSRRYNTD-APLARQLPQSPE 91
+GRVIFVD + + + P+AR P E
Sbjct: 101 NGRVIFVDYAKAKQSFGGGRYPIARGPPDPVE 132
>gi|15239958|ref|NP_196239.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
gi|9759319|dbj|BAB09686.1| unnamed protein product [Arabidopsis thaliana]
gi|17065276|gb|AAL32792.1| Unknown protein [Arabidopsis thaliana]
gi|20260002|gb|AAM13348.1| unknown protein [Arabidopsis thaliana]
gi|21593170|gb|AAM65119.1| unknown [Arabidopsis thaliana]
gi|332003601|gb|AED90984.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
Length = 146
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 63/89 (70%), Gaps = 2/89 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF TT++ L++AFS+ GQV EA I+MD+ +RSKG+G+VTF++ +EAQKAL + NG+ L
Sbjct: 41 LSFCTTEQGLSEAFSKCGQVVEAQIVMDRVSDRSKGFGFVTFASADEAQKALMEFNGQQL 100
Query: 61 DGRVIFVDNVRPSRRYNTDA--PLARQLP 87
+GR IFVD + + P+AR P
Sbjct: 101 NGRTIFVDYAKAKQSLGGGGGYPIARGPP 129
>gi|388521117|gb|AFK48620.1| unknown [Lotus japonicus]
Length = 161
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 59/75 (78%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++FSTT++ LA+AFSQ+G+V +A I++++ K RSKG+GYVTF+ EE+AQKA MN K+L
Sbjct: 76 LAFSTTEDKLAEAFSQYGKVLKADIVLNRAKTRSKGFGYVTFAKEEDAQKAQIGMNRKIL 135
Query: 61 DGRVIFVDNVRPSRR 75
GRV++VD P +
Sbjct: 136 HGRVLYVDMEPPDKH 150
>gi|38344030|emb|CAE01512.2| OJ991214_12.1 [Oryza sativa Japonica Group]
gi|38346331|emb|CAE02067.2| OJ000126_13.13 [Oryza sativa Japonica Group]
gi|116309334|emb|CAH66418.1| H0622F05.1 [Oryza sativa Indica Group]
gi|116309399|emb|CAH66476.1| OSIGBa0137L20.5 [Oryza sativa Indica Group]
Length = 137
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Query: 6 TKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVI 65
T++ LA+AFSQ+GQV EATI+ DK NR KG+G+V F++EE A KA +MNGK+L+GRVI
Sbjct: 49 TEDSLAEAFSQYGQVLEATIVTDKMTNRPKGFGFVKFASEEAANKAKEEMNGKVLNGRVI 108
Query: 66 FVDNVRPSRRYNTD-APLARQLPQSPE 91
+VD + TD +P A P+ P+
Sbjct: 109 YVDIAKAKMNRTTDSSPRATGPPKPPD 135
>gi|30683481|ref|NP_565646.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|106879155|gb|ABF82607.1| At2g27330 [Arabidopsis thaliana]
gi|330252880|gb|AEC07974.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 116
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 58/75 (77%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SFS+T+E L AFSQ+GQV + +IMDK + R KG+ YVTFS++EEA+KAL ++N +L+
Sbjct: 28 ISFSSTEETLTQAFSQYGQVLKVDVIMDKIRCRPKGFAYVTFSSKEEAEKALLELNAQLV 87
Query: 61 DGRVIFVDNVRPSRR 75
DGRV+ +D + ++
Sbjct: 88 DGRVVILDTTKAAKH 102
>gi|357167535|ref|XP_003581210.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like
[Brachypodium distachyon]
Length = 137
Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 63/84 (75%), Gaps = 1/84 (1%)
Query: 6 TKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVI 65
T++ LA+AF+++GQV EATI+ DK NRSKG+G+V F++EEEA KA +MNGK+L+GRVI
Sbjct: 48 TEDTLAEAFARYGQVLEATIVTDKMTNRSKGFGFVKFASEEEANKARDEMNGKVLNGRVI 107
Query: 66 FVDNVRPSRRYNTDA-PLARQLPQ 88
+VD + + TD P+A P+
Sbjct: 108 YVDIAKAKQDRATDVLPIASGPPK 131
>gi|224104887|ref|XP_002313606.1| predicted protein [Populus trichocarpa]
gi|222850014|gb|EEE87561.1| predicted protein [Populus trichocarpa]
Length = 109
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 55/67 (82%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SFS+T++ +A+AFS+FG+V EA I+MDK + R KGYG+VTF+ ++ A+KA MNGKLL
Sbjct: 41 LSFSSTEKKIAEAFSEFGEVIEAKIVMDKARKRPKGYGFVTFAKKDAAEKACEGMNGKLL 100
Query: 61 DGRVIFV 67
DGR I+V
Sbjct: 101 DGRAIYV 107
>gi|361067299|gb|AEW07961.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126579|gb|AFG43909.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126581|gb|AFG43910.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126583|gb|AFG43911.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126585|gb|AFG43912.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126587|gb|AFG43913.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126589|gb|AFG43914.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
gi|383126591|gb|AFG43915.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
Length = 84
Score = 87.4 bits (215), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 56/72 (77%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFVDN 69
L +AFS+FG+V E I+MD+ RSKG+G+V +++E +A++A A+MNGK+L GR+IFVD+
Sbjct: 4 LTEAFSRFGEVVEVKIVMDRVSQRSKGFGFVQYASEADAERAKAEMNGKVLSGRIIFVDD 63
Query: 70 VRPSRRYNTDAP 81
V+P + + D P
Sbjct: 64 VKPKSQLSGDLP 75
>gi|225464267|ref|XP_002271224.1| PREDICTED: cold-inducible RNA-binding protein [Vitis vinifera]
gi|296088019|emb|CBI35302.3| unnamed protein product [Vitis vinifera]
Length = 170
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 54/72 (75%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF TT+E L +AF FGQ+ E ++MDK NR +G+ ++ +STEEE++KA+ M+GK L
Sbjct: 86 LSFRTTEESLRNAFETFGQLVEVNLVMDKIANRPRGFAFLRYSTEEESEKAIEGMHGKFL 145
Query: 61 DGRVIFVDNVRP 72
DGRVIFV+ +P
Sbjct: 146 DGRVIFVEVAKP 157
>gi|351725889|ref|NP_001237108.1| uncharacterized protein LOC100305561 [Glycine max]
gi|255625921|gb|ACU13305.1| unknown [Glycine max]
Length = 180
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 54/72 (75%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF TT+E L +AF FGQ+ E ++MD+ NR +G+ ++ ++TEEE+QKA+ M+GK L
Sbjct: 95 LSFRTTEESLRNAFKNFGQLVEVKLVMDRIANRPRGFAFLRYATEEESQKAIEGMHGKFL 154
Query: 61 DGRVIFVDNVRP 72
DGRVIFV+ +P
Sbjct: 155 DGRVIFVEVAKP 166
>gi|297826049|ref|XP_002880907.1| RNA recognition motif-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297326746|gb|EFH57166.1| RNA recognition motif-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 116
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 53/68 (77%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SFS+T+E L AFSQ+GQV +IMDK + R KG YVTFS++EEA KAL ++NG+L+
Sbjct: 28 ISFSSTEETLTQAFSQYGQVLRVDVIMDKIRCRPKGIAYVTFSSKEEAGKALLELNGRLV 87
Query: 61 DGRVIFVD 68
DGRV+ +D
Sbjct: 88 DGRVVILD 95
>gi|116779573|gb|ABK21345.1| unknown [Picea sitchensis]
gi|224285462|gb|ACN40453.1| unknown [Picea sitchensis]
Length = 198
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 64/94 (68%), Gaps = 5/94 (5%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S TT+ L +AFS +G+V + IIM+K RSKG+G+V FSTEEEA AL +MNGK+L
Sbjct: 95 LSIYTTERTLQNAFSNYGKVVDVRIIMNKTTRRSKGFGFVEFSTEEEANTALKEMNGKIL 154
Query: 61 DGRVIFVDNVRPSRRYNTDAPLARQLPQ-SPEEN 93
+G +I VD +P+ R AR++PQ +P+ N
Sbjct: 155 NGWLISVDIAKPTPRSGR----AREMPQKTPDMN 184
>gi|388505224|gb|AFK40678.1| unknown [Lotus japonicus]
Length = 187
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 53/72 (73%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF TT+E L + F FGQ+ + ++MDK NR +G+ ++ ++TEEE+QKA+ M+GK L
Sbjct: 101 LSFRTTEESLRNCFKNFGQLVDVNLVMDKLANRPRGFAFLRYATEEESQKAIEGMHGKFL 160
Query: 61 DGRVIFVDNVRP 72
DGRVIFV+ +P
Sbjct: 161 DGRVIFVEVAKP 172
>gi|361067297|gb|AEW07960.1| Pinus taeda anonymous locus 0_15424_01 genomic sequence
Length = 84
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 55/72 (76%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFVDN 69
L +AFS+FG+V E I+MD+ RSKG+G+V +++E +A++A A+MNGK+L GR+IFVD+
Sbjct: 4 LTEAFSRFGEVVEVKIVMDRVSQRSKGFGFVQYASEADAERAKAEMNGKVLSGRIIFVDD 63
Query: 70 VRPSRRYNTDAP 81
V+ + + D P
Sbjct: 64 VKAKSQLSGDLP 75
>gi|224120444|ref|XP_002318331.1| predicted protein [Populus trichocarpa]
gi|222859004|gb|EEE96551.1| predicted protein [Populus trichocarpa]
Length = 181
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 52/72 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF TT+E L +AF FGQ+ + ++MDK R +G+ ++ + TEEEAQKA+ M+GK L
Sbjct: 97 LSFRTTEESLRNAFQNFGQLVDVNLVMDKVAKRPRGFAFLRYETEEEAQKAIEGMHGKFL 156
Query: 61 DGRVIFVDNVRP 72
DGRVIFV+ +P
Sbjct: 157 DGRVIFVEVAKP 168
>gi|357510439|ref|XP_003625508.1| RNA binding protein [Medicago truncatula]
gi|355500523|gb|AES81726.1| RNA binding protein [Medicago truncatula]
Length = 141
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 49/68 (72%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
TT E L +AFS FGQ+ EA +I D+G RSKG+ +V++ST EEA+KA MN K LDG V
Sbjct: 46 TTDEKLTEAFSPFGQLLEAKVITDRGSGRSKGFAFVSYSTIEEAEKAREGMNAKFLDGWV 105
Query: 65 IFVDNVRP 72
IFVD +P
Sbjct: 106 IFVDPAKP 113
>gi|242073000|ref|XP_002446436.1| hypothetical protein SORBIDRAFT_06g016070 [Sorghum bicolor]
gi|241937619|gb|EES10764.1| hypothetical protein SORBIDRAFT_06g016070 [Sorghum bicolor]
Length = 135
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
T+E LA+AFS++GQV EAT++ DK + KG+G+V F++ EEA A +MNGK L+GRV
Sbjct: 46 ATEESLAEAFSRYGQVIEATVVRDKVTDIPKGFGFVKFASPEEANNAREEMNGKALNGRV 105
Query: 65 IFVDNVRPSRRYNTDA-PLARQLPQ 88
I+VD + TDA P+AR P+
Sbjct: 106 IYVDIAKAKPDRATDALPIARGPPK 130
>gi|15224298|ref|NP_181287.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|20197470|gb|AAM15089.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|21536972|gb|AAM61313.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|114050677|gb|ABI49488.1| At2g37510 [Arabidopsis thaliana]
gi|330254316|gb|AEC09410.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 142
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 49/64 (76%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
TT E L DAF+ FGQ+ +A +I D+ RSKG+G+VT++T E+A+KA A+MN K LDG V
Sbjct: 45 TTNEKLQDAFASFGQLVDARVITDRDSGRSKGFGFVTYATIEDAEKAKAEMNAKFLDGWV 104
Query: 65 IFVD 68
IFVD
Sbjct: 105 IFVD 108
>gi|297827259|ref|XP_002881512.1| hypothetical protein ARALYDRAFT_902894 [Arabidopsis lyrata subsp.
lyrata]
gi|297327351|gb|EFH57771.1| hypothetical protein ARALYDRAFT_902894 [Arabidopsis lyrata subsp.
lyrata]
Length = 142
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 49/64 (76%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
TT E L DAF+ FGQ+ +A +I D+ RSKG+G+VT++T E+A+KA A+MN K LDG V
Sbjct: 45 TTNEKLQDAFASFGQLVDARVITDRETGRSKGFGFVTYATIEDAEKAKAEMNAKFLDGWV 104
Query: 65 IFVD 68
IFVD
Sbjct: 105 IFVD 108
>gi|351724829|ref|NP_001237071.1| uncharacterized protein LOC100306326 [Glycine max]
gi|255628209|gb|ACU14449.1| unknown [Glycine max]
Length = 139
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 48/68 (70%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
T E L +AFS FGQ+ EA +I+D+ RSKG+ +VT++T EEA+KA MN K LDG V
Sbjct: 44 TIDEKLKEAFSSFGQLVEAKVIIDRASGRSKGFAFVTYTTIEEAEKAREGMNAKFLDGWV 103
Query: 65 IFVDNVRP 72
IFVD +P
Sbjct: 104 IFVDPAKP 111
>gi|297842099|ref|XP_002888931.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297334772|gb|EFH65190.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 181
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 57/91 (62%), Gaps = 4/91 (4%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF TT++ L D F QFG++ ++MDK NR +G+ ++ + TEEEA KA+ M+GK L
Sbjct: 84 LSFRTTEDTLRDTFEQFGKLIHMNLVMDKVANRPRGFAFLRYETEEEAMKAIQGMHGKFL 143
Query: 61 DGRVIFVDNVRPSRRYNTDAPLARQLPQSPE 91
DGRVIFV+ + +D A+ P P+
Sbjct: 144 DGRVIFVEEA----KTRSDISRAKPRPDFPK 170
>gi|218195435|gb|EEC77862.1| hypothetical protein OsI_17125 [Oryza sativa Indica Group]
Length = 152
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 53/71 (74%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF TT+E L +AF +FGQ+TE ++M++ R +G+ ++++++EEE++ A+ M GK L
Sbjct: 77 LSFRTTEESLRNAFERFGQLTEVNLVMERVAKRPRGFAFLSYASEEESKNAMEGMQGKFL 136
Query: 61 DGRVIFVDNVR 71
DGRVIFV+ R
Sbjct: 137 DGRVIFVEVAR 147
>gi|15219486|ref|NP_177494.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|11120799|gb|AAG30979.1|AC012396_15 RNA-binding glycine-rich protein, putative [Arabidopsis thaliana]
gi|62867629|gb|AAY17418.1| At1g73530 [Arabidopsis thaliana]
gi|114050615|gb|ABI49457.1| At1g73530 [Arabidopsis thaliana]
gi|332197351|gb|AEE35472.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 181
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 49/71 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF TT++ L D F QFG + ++MDK NR KG+ ++ + TEEEA KA+ M+GK L
Sbjct: 84 LSFRTTEDTLRDTFEQFGNLIHMNMVMDKVANRPKGFAFLRYETEEEAMKAIQGMHGKFL 143
Query: 61 DGRVIFVDNVR 71
DGRVIFV+ +
Sbjct: 144 DGRVIFVEEAK 154
>gi|222629430|gb|EEE61562.1| hypothetical protein OsJ_15917 [Oryza sativa Japonica Group]
Length = 149
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 53/71 (74%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF TT+E L +AF +FGQ+TE ++M++ R +G+ ++++++EEE++ A+ M GK L
Sbjct: 74 LSFRTTEESLRNAFERFGQLTEVNLVMERVAKRPRGFAFLSYASEEESKNAMEGMQGKFL 133
Query: 61 DGRVIFVDNVR 71
DGRVIFV+ R
Sbjct: 134 DGRVIFVEVAR 144
>gi|357454123|ref|XP_003597342.1| Cold-inducible RNA-binding protein [Medicago truncatula]
gi|355486390|gb|AES67593.1| Cold-inducible RNA-binding protein [Medicago truncatula]
Length = 142
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 54/72 (75%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF TT++ L FS FG +TEAT+I D+ R KG+G+V++ +E EA+KA +NG+++
Sbjct: 67 LSFYTTQQQLESLFSPFGVLTEATLITDQNTQRPKGFGFVSYKSEIEAEKARKALNGRIV 126
Query: 61 DGRVIFVDNVRP 72
DGR+IFV++ +P
Sbjct: 127 DGRLIFVEHAKP 138
>gi|225439737|ref|XP_002274178.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
gi|297741476|emb|CBI32608.3| unnamed protein product [Vitis vinifera]
Length = 140
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 47/64 (73%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
TT E L +AFS FGQ+ EA +I D+ RSKG+G+VT++T EEA+KA MN K LDG V
Sbjct: 45 TTDEKLKEAFSPFGQLLEAKVITDRVSGRSKGFGFVTYTTLEEAEKAREGMNAKFLDGWV 104
Query: 65 IFVD 68
IFVD
Sbjct: 105 IFVD 108
>gi|255581040|ref|XP_002531336.1| RNA binding protein, putative [Ricinus communis]
gi|223529058|gb|EEF31043.1| RNA binding protein, putative [Ricinus communis]
Length = 144
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 48/64 (75%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
TT E L +AFS FGQ+ +A +I+D+ RSKG+G++T++T EEA+KA MN K LDG V
Sbjct: 47 TTDEKLKEAFSPFGQLVDAKVIIDRASGRSKGFGFITYATIEEAEKAREGMNAKFLDGWV 106
Query: 65 IFVD 68
IFVD
Sbjct: 107 IFVD 110
>gi|357454121|ref|XP_003597341.1| Cold-inducible RNA-binding protein [Medicago truncatula]
gi|355486389|gb|AES67592.1| Cold-inducible RNA-binding protein [Medicago truncatula]
gi|388509994|gb|AFK43063.1| unknown [Medicago truncatula]
Length = 89
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 54/72 (75%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF TT++ L FS FG +TEAT+I D+ R KG+G+V++ +E EA+KA +NG+++
Sbjct: 14 LSFYTTQQQLESLFSPFGVLTEATLITDQNTQRPKGFGFVSYKSEIEAEKARKALNGRIV 73
Query: 61 DGRVIFVDNVRP 72
DGR+IFV++ +P
Sbjct: 74 DGRLIFVEHAKP 85
>gi|440577321|emb|CCI55328.1| PH01B001I13.24 [Phyllostachys edulis]
Length = 196
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 51/68 (75%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF TT+E L AF +FGQ+TE ++MD+ R +G+ +++++ EEE++ A+ M+GK L
Sbjct: 123 LSFRTTEESLRSAFERFGQLTEVNLVMDRVAKRPRGFAFLSYANEEESKNAMEGMHGKFL 182
Query: 61 DGRVIFVD 68
DGRVIFV+
Sbjct: 183 DGRVIFVE 190
>gi|326505708|dbj|BAJ95525.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 226
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 53/72 (73%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+STT E L DAFS++G+VTEA ++MDK RS+G+ +VTF ++ ++A+ DMNG L
Sbjct: 14 LSWSTTDESLKDAFSKYGKVTEAKVVMDKFSGRSRGFAFVTFDEKKAMEEAIEDMNGLDL 73
Query: 61 DGRVIFVDNVRP 72
+GR I VD +P
Sbjct: 74 EGRAITVDKAQP 85
>gi|326491331|dbj|BAK05765.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 262
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 53/72 (73%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+STT E L DAFS++G+VTEA ++MDK RS+G+ +VTF ++ ++A+ DMNG L
Sbjct: 50 LSWSTTDESLKDAFSKYGKVTEAKVVMDKFSGRSRGFAFVTFDEKKAMEEAIEDMNGLDL 109
Query: 61 DGRVIFVDNVRP 72
+GR I VD +P
Sbjct: 110 EGRAITVDKAQP 121
>gi|226510389|ref|NP_001150093.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195636652|gb|ACG37794.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 135
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
T+ LA+AFS++GQV EAT++ DK + KG+G+V F++ EEA A +MNGK L+GRV
Sbjct: 46 ATEASLAEAFSRYGQVIEATVVRDKVTDVPKGFGFVKFASPEEANNAREEMNGKALNGRV 105
Query: 65 IFVDNVRPSRRYNTDA-PLARQLPQ 88
I+VD + + DA P+AR P+
Sbjct: 106 IYVDIAKARQDRAADALPIARGPPK 130
>gi|194699346|gb|ACF83757.1| unknown [Zea mays]
gi|414587318|tpg|DAA37889.1| TPA: glycine-rich RNA-binding protein 2 [Zea mays]
Length = 135
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
T+ LA+AFS++GQV EAT++ DK + KG+G+V F++ EEA A +MNGK L+GRV
Sbjct: 46 ATEASLAEAFSRYGQVIEATVVRDKVTDVPKGFGFVKFASPEEANNAREEMNGKALNGRV 105
Query: 65 IFVDNVRPSRRYNTDA-PLARQLPQ 88
I+VD + + DA P+AR P+
Sbjct: 106 IYVDIAKARQDRAADALPIARGPPK 130
>gi|356505124|ref|XP_003521342.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Glycine max]
Length = 139
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 47/68 (69%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
T E L +AFS FGQ+ EA +I D+ RSKG+ +VT++T EEA++A MN K LDG V
Sbjct: 44 TKDENLKEAFSSFGQLVEAKVITDRASGRSKGFAFVTYTTIEEAERAREGMNAKFLDGWV 103
Query: 65 IFVDNVRP 72
IFVD +P
Sbjct: 104 IFVDPAKP 111
>gi|147867424|emb|CAN83272.1| hypothetical protein VITISV_001132 [Vitis vinifera]
Length = 408
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T+++ L AF FG++ E IIMDK RSKGY ++ +STEE A AL +MNGK++
Sbjct: 323 LSFYTSEKTLRGAFEGFGELVEVKIIMDKISKRSKGYAFIEYSTEEAASAALKEMNGKII 382
Query: 61 DGRVIFVDNVRPS-RRYNTDAP 81
+G +I VD +P+ ++Y+ P
Sbjct: 383 NGWMIVVDVAKPTPQKYSRSRP 404
>gi|125543335|gb|EAY89474.1| hypothetical protein OsI_11005 [Oryza sativa Indica Group]
Length = 173
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
TT E L +AF+ FGQ+ EA +I D+ RSKG+G+V ++T EEA+ A +MN K LDG V
Sbjct: 78 TTDEKLKNAFAPFGQLLEAKVITDRISGRSKGFGFVRYATLEEAENARQEMNAKFLDGWV 137
Query: 65 IFVDNVRP 72
IFVD +P
Sbjct: 138 IFVDPAKP 145
>gi|449446458|ref|XP_004140988.1| PREDICTED: uncharacterized protein LOC101208465 [Cucumis sativus]
Length = 394
Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 39/77 (50%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T+++ L AF FG++ E IIMDK RSKGY +V ++TEE A AL +MNGK++
Sbjct: 313 LSFYTSEKTLRAAFEGFGKLVEVKIIMDKISKRSKGYAFVEYTTEEAASAALKEMNGKII 372
Query: 61 DGRVIFVDNVRPS-RRY 76
+G +I VD +PS RRY
Sbjct: 373 NGWMIVVDIAKPSPRRY 389
>gi|449525960|ref|XP_004169984.1| PREDICTED: uncharacterized LOC101208465 [Cucumis sativus]
Length = 394
Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 39/77 (50%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T+++ L AF FG++ E IIMDK RSKGY +V ++TEE A AL +MNGK++
Sbjct: 313 LSFYTSEKTLRAAFEGFGKLVEVKIIMDKISKRSKGYAFVEYTTEEAASAALKEMNGKII 372
Query: 61 DGRVIFVDNVRPS-RRY 76
+G +I VD +PS RRY
Sbjct: 373 NGWMIVVDIAKPSPRRY 389
>gi|115452257|ref|NP_001049729.1| Os03g0278800 [Oryza sativa Japonica Group]
gi|108707493|gb|ABF95288.1| RNA-binding protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113548200|dbj|BAF11643.1| Os03g0278800 [Oryza sativa Japonica Group]
gi|125543333|gb|EAY89472.1| hypothetical protein OsI_11004 [Oryza sativa Indica Group]
gi|125585797|gb|EAZ26461.1| hypothetical protein OsJ_10350 [Oryza sativa Japonica Group]
Length = 173
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
TT E L +AF+ FGQ+ EA +I D+ RSKG+G+V ++T EEA+ A +MN K LDG V
Sbjct: 78 TTDEKLKNAFAPFGQLLEAKVITDRISGRSKGFGFVRYATLEEAENARQEMNAKFLDGWV 137
Query: 65 IFVDNVRP 72
IFVD +P
Sbjct: 138 IFVDPAKP 145
>gi|357122439|ref|XP_003562923.1| PREDICTED: uncharacterized protein LOC100844345 [Brachypodium
distachyon]
Length = 206
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 51/72 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+STT E L DAF +FG VTEA +++DK RS+G+ +VTF +++ + A+ DMNG L
Sbjct: 14 LSWSTTDESLKDAFRKFGNVTEAKVVLDKFSGRSRGFAFVTFDEKKDMEAAIEDMNGLDL 73
Query: 61 DGRVIFVDNVRP 72
DGR I VD +P
Sbjct: 74 DGRAITVDKAQP 85
>gi|406950086|gb|EKD80418.1| cp31AHv protein [uncultured bacterium]
Length = 122
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 52/72 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++TT + L FSQ G V+ A +I D+ RSKG+G+V S++EEAQKA+A++NGK L
Sbjct: 10 LAWATTDDSLQAFFSQAGTVSSARVITDRATGRSKGFGFVEMSSDEEAQKAVAELNGKEL 69
Query: 61 DGRVIFVDNVRP 72
DGR I V+ RP
Sbjct: 70 DGRAIVVNEARP 81
>gi|388519245|gb|AFK47684.1| unknown [Lotus japonicus]
Length = 138
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 50/72 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S TT L +AF+ FGQ+ EA +I D+ RSKG+G+V++++ EEA+KA MN K L
Sbjct: 38 LSRQTTDRKLNEAFAPFGQLIEAKVITDRASGRSKGFGFVSYASIEEAEKAGKGMNAKFL 97
Query: 61 DGRVIFVDNVRP 72
DG VIFVD +P
Sbjct: 98 DGWVIFVDPAKP 109
>gi|226499338|ref|NP_001149519.1| glycine-rich RNA-binding protein 8 [Zea mays]
gi|195627730|gb|ACG35695.1| glycine-rich RNA-binding protein 8 [Zea mays]
Length = 198
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 51/72 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+STT E L DAFS+FG +TEA +++DK RS+G+G+VTF ++ + A+ MNG L
Sbjct: 14 LSWSTTDESLKDAFSKFGNLTEAKVVLDKFSGRSRGFGFVTFDEKQAMEDAIEGMNGLDL 73
Query: 61 DGRVIFVDNVRP 72
DGR I VD +P
Sbjct: 74 DGRNITVDKAQP 85
>gi|225464121|ref|XP_002264164.1| PREDICTED: uncharacterized protein LOC100265361 [Vitis vinifera]
Length = 409
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T+++ L AF FG++ E IIMDK RSKGY ++ ++TEE A AL +MNGK++
Sbjct: 324 LSFYTSEKTLRGAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEMNGKII 383
Query: 61 DGRVIFVDNVRPS-RRYNTDAP 81
+G +I VD +P+ ++Y+ P
Sbjct: 384 NGWMIVVDVAKPTPQKYSRSRP 405
>gi|242036137|ref|XP_002465463.1| hypothetical protein SORBIDRAFT_01g039290 [Sorghum bicolor]
gi|241919317|gb|EER92461.1| hypothetical protein SORBIDRAFT_01g039290 [Sorghum bicolor]
Length = 169
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 48/68 (70%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
TT E L AF+ FG++ EA ++ D+ RSKG+G+V ++T EEA+KA +MN K LDG V
Sbjct: 74 TTDEKLQGAFAPFGRILEAKVVTDRVSGRSKGFGFVRYATIEEAEKARQEMNAKFLDGWV 133
Query: 65 IFVDNVRP 72
IFVD +P
Sbjct: 134 IFVDPAKP 141
>gi|238014210|gb|ACR38140.1| unknown [Zea mays]
gi|414873814|tpg|DAA52371.1| TPA: glycine-rich RNA-binding protein 8 isoform 1 [Zea mays]
gi|414873815|tpg|DAA52372.1| TPA: glycine-rich RNA-binding protein 8 isoform 2 [Zea mays]
gi|414873816|tpg|DAA52373.1| TPA: glycine-rich RNA-binding protein 8 isoform 3 [Zea mays]
Length = 205
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 51/72 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+STT E L DAFS+FG +TEA +++DK RS+G+G+VTF ++ + A+ MNG L
Sbjct: 14 LSWSTTDESLKDAFSKFGNLTEAKVVLDKFSGRSRGFGFVTFDEKQAMEDAIEGMNGLDL 73
Query: 61 DGRVIFVDNVRP 72
DGR I VD +P
Sbjct: 74 DGRNITVDKAQP 85
>gi|326490373|dbj|BAJ84850.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 299
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 49/67 (73%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T + L DAFS +GQVTEA +IMD+ RS+G+G+VTF++ EEA A+ M+GK L
Sbjct: 38 ISYGTDDQSLGDAFSNYGQVTEAKVIMDRESGRSRGFGFVTFTSSEEAGAAITGMDGKDL 97
Query: 61 DGRVIFV 67
GR++ V
Sbjct: 98 QGRIVRV 104
>gi|226498016|ref|NP_001151732.1| RNA binding protein [Zea mays]
gi|195649405|gb|ACG44170.1| RNA binding protein [Zea mays]
Length = 147
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 50/68 (73%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF TT+ L DAF +FG +TE ++MD+ R +G+ +++++ EEEA+ A+ M+GK L
Sbjct: 72 LSFRTTERSLRDAFEKFGDLTEVCLVMDRVAKRPRGFAFLSYTGEEEARGAMEGMHGKFL 131
Query: 61 DGRVIFVD 68
DGRVIFV+
Sbjct: 132 DGRVIFVE 139
>gi|296087958|emb|CBI35241.3| unnamed protein product [Vitis vinifera]
Length = 315
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T+++ L AF FG++ E IIMDK RSKGY ++ ++TEE A AL +MNGK++
Sbjct: 230 LSFYTSEKTLRGAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAASAALKEMNGKII 289
Query: 61 DGRVIFVDNVRPS-RRYNTDAP 81
+G +I VD +P+ ++Y+ P
Sbjct: 290 NGWMIVVDVAKPTPQKYSRSRP 311
>gi|449448655|ref|XP_004142081.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 146
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 47/64 (73%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
TT E L +AFS FGQ+ +A ++ D+ RSKG+ +VT+ST +EA+KA +MN K LDG V
Sbjct: 51 TTDEKLREAFSSFGQLVDAKVVTDRATGRSKGFAFVTYSTIDEAEKAREEMNAKFLDGWV 110
Query: 65 IFVD 68
IFVD
Sbjct: 111 IFVD 114
>gi|449516497|ref|XP_004165283.1| PREDICTED: glycine-rich RNA-binding protein 2-like, partial
[Cucumis sativus]
Length = 100
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 47/64 (73%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
TT E L +AFS FGQ+ +A ++ D+ RSKG+ +VT+ST +EA+KA +MN K LDG V
Sbjct: 5 TTDEKLREAFSSFGQLADAKVVTDRATGRSKGFAFVTYSTIDEAEKAREEMNAKFLDGWV 64
Query: 65 IFVD 68
IFVD
Sbjct: 65 IFVD 68
>gi|115456445|ref|NP_001051823.1| Os03g0836200 [Oryza sativa Japonica Group]
gi|40714682|gb|AAR88588.1| putative RNA binding protein [Oryza sativa Japonica Group]
gi|108711961|gb|ABF99756.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711962|gb|ABF99757.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711963|gb|ABF99758.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711964|gb|ABF99759.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113550294|dbj|BAF13737.1| Os03g0836200 [Oryza sativa Japonica Group]
gi|125546344|gb|EAY92483.1| hypothetical protein OsI_14220 [Oryza sativa Indica Group]
gi|125588547|gb|EAZ29211.1| hypothetical protein OsJ_13272 [Oryza sativa Japonica Group]
gi|215695067|dbj|BAG90258.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215715212|dbj|BAG94963.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215764998|dbj|BAG86695.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 205
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 49/72 (68%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+STT E L DAF +FG +TEA ++ DK RS+G+G+VTF ++ + A+ MNG L
Sbjct: 14 LSWSTTDESLKDAFGKFGNLTEAKVVFDKYSGRSRGFGFVTFDEKKAMEDAIEGMNGLDL 73
Query: 61 DGRVIFVDNVRP 72
DGR I VD +P
Sbjct: 74 DGRAITVDKAQP 85
>gi|226529880|ref|NP_001150360.1| RNA binding protein [Zea mays]
gi|195638638|gb|ACG38787.1| RNA binding protein [Zea mays]
gi|414866145|tpg|DAA44702.1| TPA: RNA binding protein [Zea mays]
Length = 166
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 48/68 (70%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
TT E L AF+ FG++ EA ++ D+ RSKG+G+V ++T EEA++A +MN K LDG V
Sbjct: 71 TTDEKLQGAFAPFGRLLEAKVVTDRVSGRSKGFGFVRYATIEEAERARQEMNAKFLDGWV 130
Query: 65 IFVDNVRP 72
IFVD +P
Sbjct: 131 IFVDPAKP 138
>gi|356576299|ref|XP_003556270.1| PREDICTED: uncharacterized protein LOC100791652 [Glycine max]
Length = 386
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 34/73 (46%), Positives = 51/73 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T+++ L AF FG++ E +IMDK RSKGY +V ++TEE A AL +MNGK++
Sbjct: 304 LSFYTSEKTLRAAFEGFGELVEVKVIMDKISKRSKGYAFVEYTTEEAASAALKEMNGKII 363
Query: 61 DGRVIFVDNVRPS 73
+G +I VD +P+
Sbjct: 364 NGWMIVVDVAKPN 376
>gi|242080503|ref|XP_002445020.1| hypothetical protein SORBIDRAFT_07g002960 [Sorghum bicolor]
gi|241941370|gb|EES14515.1| hypothetical protein SORBIDRAFT_07g002960 [Sorghum bicolor]
Length = 140
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
TT E L DAF++FG+V A ++ D+ SKG+G+V ++T EEA K + M+GK LDG V
Sbjct: 46 TTTEGLRDAFAKFGEVVHARVVTDRVSGFSKGFGFVRYATTEEATKGIEGMDGKFLDGWV 105
Query: 65 IFVDNVRP 72
IF + RP
Sbjct: 106 IFAEYARP 113
>gi|255568010|ref|XP_002524982.1| RNA binding protein, putative [Ricinus communis]
gi|223535726|gb|EEF37389.1| RNA binding protein, putative [Ricinus communis]
Length = 371
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 50/73 (68%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T+++ L AF FG++ E IIMDK RSKGY ++ ++TEE A AL +MNGK++
Sbjct: 286 LSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFIEYTTEEAANAALKEMNGKII 345
Query: 61 DGRVIFVDNVRPS 73
+G +I VD + S
Sbjct: 346 NGWMIVVDVAKTS 358
>gi|9757907|dbj|BAB08354.1| unnamed protein product [Arabidopsis thaliana]
Length = 112
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 50/67 (74%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
TT + L F+ FGQ+TE+ +I D+ R KG+G++TF +E++AQKAL +NGK+++GR+
Sbjct: 32 TTDQSLRQLFAPFGQITESRLIKDQQTQRPKGFGFITFESEDDAQKALKALNGKIVNGRL 91
Query: 65 IFVDNVR 71
IFV+ +
Sbjct: 92 IFVETAK 98
>gi|224110196|ref|XP_002315444.1| predicted protein [Populus trichocarpa]
gi|222864484|gb|EEF01615.1| predicted protein [Populus trichocarpa]
Length = 311
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 48/68 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T+++ L AF FG++ E IIMDK RSKGY +V ++TEE A AL +MNGK++
Sbjct: 226 LSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFVKYTTEEAASSALKEMNGKII 285
Query: 61 DGRVIFVD 68
+G +I VD
Sbjct: 286 NGWMIVVD 293
>gi|297819134|ref|XP_002877450.1| hypothetical protein ARALYDRAFT_905782 [Arabidopsis lyrata subsp.
lyrata]
gi|297323288|gb|EFH53709.1| hypothetical protein ARALYDRAFT_905782 [Arabidopsis lyrata subsp.
lyrata]
Length = 102
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 51/75 (68%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
TT + L FS FGQ+ EA +I D R KG+G++TF +E++A+KAL ++GK+++GR+
Sbjct: 18 TTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFESEDDARKALKSLDGKIVEGRL 77
Query: 65 IFVDNVRPSRRYNTD 79
IFV+ + S TD
Sbjct: 78 IFVEVAKSSEEVTTD 92
>gi|375108277|ref|ZP_09754538.1| RRM domain-containing RNA-binding protein [Burkholderiales
bacterium JOSHI_001]
gi|374669008|gb|EHR73793.1| RRM domain-containing RNA-binding protein [Burkholderiales
bacterium JOSHI_001]
Length = 167
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 47/72 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++S E L AFSQFG VT A ++MD+ RSKG+G+V T EAQ A+ MNG+ L
Sbjct: 10 LAYSVRDESLQAAFSQFGTVTSAKVMMDRETGRSKGFGFVEMGTGAEAQAAINGMNGQPL 69
Query: 61 DGRVIFVDNVRP 72
+GR + V+ RP
Sbjct: 70 EGRAVVVNEARP 81
>gi|116792076|gb|ABK26221.1| unknown [Picea sitchensis]
Length = 151
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 50/81 (61%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S TT E L +AFS+FG+V EA ++ DK SKG+ +V ++T+EEA K M+GK L
Sbjct: 54 LSKRTTDEGLREAFSKFGRVLEARVVTDKMNGVSKGFAFVRYATQEEADKGKEGMDGKFL 113
Query: 61 DGRVIFVDNVRPSRRYNTDAP 81
DG VIF D RP D P
Sbjct: 114 DGWVIFADYARPRPPRTYDNP 134
>gi|67483728|ref|XP_657084.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56474323|gb|EAL51698.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|449705266|gb|EMD45349.1| RNA recognition motif domain containing protein [Entamoeba
histolytica KU27]
Length = 136
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 50/72 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++S T E L AF +FG VT+ ++ D+ RSKG+G+VTF +E+A+KA+ +MN + L
Sbjct: 9 LAYSVTDESLKAAFEKFGTVTDCKVVTDRDSQRSKGFGFVTFEKDEDAKKAIEEMNEQEL 68
Query: 61 DGRVIFVDNVRP 72
+GR I VD RP
Sbjct: 69 EGRRIKVDVSRP 80
>gi|357112848|ref|XP_003558218.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 168
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 45/68 (66%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
TT E L +AF FGQV EA +I D+ RSKG+G+V + + +EA+ A MN K LDG V
Sbjct: 73 TTDEKLKNAFIPFGQVLEAKVITDRISGRSKGFGFVRYVSLQEAEAARQGMNAKFLDGWV 132
Query: 65 IFVDNVRP 72
IFVD +P
Sbjct: 133 IFVDPAKP 140
>gi|297792921|ref|XP_002864345.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297310180|gb|EFH40604.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 156
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 47/68 (69%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
TT E L AF+QFG+V +A ++ D+ SKG+G+V ++T E++ K +A M+GK LDG V
Sbjct: 67 TTSEGLRTAFAQFGEVADAKVVTDRVSGYSKGFGFVRYATLEDSAKGIAGMDGKFLDGWV 126
Query: 65 IFVDNVRP 72
IF + RP
Sbjct: 127 IFAEYARP 134
>gi|212276175|ref|NP_001130201.1| hypothetical protein [Zea mays]
gi|194688532|gb|ACF78350.1| unknown [Zea mays]
gi|414887483|tpg|DAA63497.1| TPA: hypothetical protein ZEAMMB73_917992 [Zea mays]
gi|414887484|tpg|DAA63498.1| TPA: hypothetical protein ZEAMMB73_917992 [Zea mays]
Length = 308
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 50/70 (71%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF+T + L DAFS+FG V EA II+D+ RS+G+G++TF++ EEA A+ M+GK L
Sbjct: 39 LSFATDETTLKDAFSEFGNVLEARIIIDRESGRSRGFGFITFTSTEEASAAMTSMDGKEL 98
Query: 61 DGRVIFVDNV 70
GR I V++
Sbjct: 99 QGRNIRVNHA 108
>gi|209155104|gb|ACI33784.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|223648252|gb|ACN10884.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 167
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 49/73 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L D FS++GQ++E +I D+ RS+G+G+VTF +EA+ A+ MNGK L
Sbjct: 12 LSFDTNEQSLEDVFSKYGQISEVVVIKDRETQRSRGFGFVTFENPDEAKDAMLAMNGKSL 71
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 72 DGRQIRVDQAGKS 84
>gi|15239676|ref|NP_200269.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|9758950|dbj|BAB09337.1| unnamed protein product [Arabidopsis thaliana]
gi|18175762|gb|AAL59923.1| unknown protein [Arabidopsis thaliana]
gi|20465513|gb|AAM20239.1| unknown protein [Arabidopsis thaliana]
gi|21553374|gb|AAM62467.1| unknown [Arabidopsis thaliana]
gi|332009129|gb|AED96512.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 156
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 47/68 (69%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
TT E L AF+QFG+V +A ++ D+ SKG+G+V ++T E++ K +A M+GK LDG V
Sbjct: 67 TTSEGLRTAFAQFGEVADAKVVTDRVSGYSKGFGFVRYATLEDSAKGIAGMDGKFLDGWV 126
Query: 65 IFVDNVRP 72
IF + RP
Sbjct: 127 IFAEYARP 134
>gi|226491121|ref|NP_001143351.1| uncharacterized protein LOC100275970 [Zea mays]
gi|195618716|gb|ACG31188.1| hypothetical protein [Zea mays]
Length = 295
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 50/70 (71%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF+T + L DAFS+FG V EA II+D+ RS+G+G++TF++ EEA A+ M+GK L
Sbjct: 39 LSFATDETTLKDAFSEFGNVLEARIIIDRESGRSRGFGFITFTSTEEASAAMTSMDGKEL 98
Query: 61 DGRVIFVDNV 70
GR I V++
Sbjct: 99 QGRNIRVNHA 108
>gi|353241625|emb|CCA73428.1| related to NSR1-nuclear localization sequence binding protein
[Piriformospora indica DSM 11827]
Length = 657
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 48/72 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++ E L F G+V A++ MD+ RSKG+GYV+FST E A+KA+A+MNGK +
Sbjct: 398 LSWNVDDEWLKSEFEACGEVVRASVQMDRQTGRSKGFGYVSFSTPEAAEKAIAEMNGKEI 457
Query: 61 DGRVIFVDNVRP 72
DGR + V+ P
Sbjct: 458 DGRAVNVNAATP 469
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
VSF+ ++ML + F + G + + D+ + KG+GYV F++ E A+ A +NGK +
Sbjct: 497 VSFNANEDMLWETFGEHGDIVSVRLPTDRETGQMKGFGYVEFTSVENAKSAFNALNGKDI 556
Query: 61 DGRVIFVDNVRP 72
GR I +D +P
Sbjct: 557 AGRNIRLDFSQP 568
>gi|357152879|ref|XP_003576265.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 165
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 49/74 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L AFS FG++ +A II D+ RS+G+G+VTF+TEE Q A+ MNGK L
Sbjct: 11 LAWATDDHNLQSAFSNFGEILDAKIIQDRETGRSRGFGFVTFATEESMQAAIEGMNGKEL 70
Query: 61 DGRVIFVDNVRPSR 74
DGR I V+ + R
Sbjct: 71 DGRSITVNQAQSRR 84
>gi|407033602|gb|EKE36900.1| RNA recognition motif (RRM, RBD, or RNP domain) containing
protein [Entamoeba nuttalli P19]
Length = 136
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 50/72 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++S T E L AF +FG VT+ ++ D+ RSKG+G+VTF +E+A+KA+ +MN + L
Sbjct: 9 LAYSVTDESLKAAFEKFGTVTDCKVVTDRDSQRSKGFGFVTFEKDEDAKKAIEEMNEQEL 68
Query: 61 DGRVIFVDNVRP 72
+GR I VD RP
Sbjct: 69 EGRRIKVDVSRP 80
>gi|296811816|ref|XP_002846246.1| glycine-rich RNA-binding protein [Arthroderma otae CBS 113480]
gi|238843634|gb|EEQ33296.1| glycine-rich RNA-binding protein [Arthroderma otae CBS 113480]
Length = 133
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ TT + L D FS+FG + EA ++ D+ NRS+G+G+V FS E EA AL MN +
Sbjct: 11 LAWHTTDDTLRDGFSKFGTIEEAIVVKDRDTNRSRGFGFVRFSNESEADAALNAMNNQEF 70
Query: 61 DGRVIFVD 68
DGRVI VD
Sbjct: 71 DGRVIRVD 78
>gi|225706362|gb|ACO09027.1| Cold-inducible RNA-binding protein [Osmerus mordax]
Length = 172
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 48/68 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L D FS++GQ++E +I D+ RS+G+G+VTF +EA+ A+ MNGK L
Sbjct: 12 LSFDTNEQSLEDVFSKYGQISEVVVIKDRETQRSRGFGFVTFDNPDEAKDAMLAMNGKSL 71
Query: 61 DGRVIFVD 68
DGR I VD
Sbjct: 72 DGRQIRVD 79
>gi|357442985|ref|XP_003591770.1| RNA-binding protein [Medicago truncatula]
gi|355480818|gb|AES62021.1| RNA-binding protein [Medicago truncatula]
Length = 284
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T+++ L AF FG++ E +I+DK RSKGY ++ ++TEE A AL +MNGK++
Sbjct: 199 LSFYTSEKTLRAAFEGFGELVEVKVIIDKISKRSKGYAFIEYTTEEAASAALKEMNGKII 258
Query: 61 DGRVIFVDNVRPS-RRYN 77
+G +I VD + + RYN
Sbjct: 259 NGWMIVVDVAKTTPPRYN 276
>gi|315057077|ref|XP_003177913.1| hypothetical protein MGYG_01973 [Arthroderma gypseum CBS 118893]
gi|311339759|gb|EFQ98961.1| hypothetical protein MGYG_01973 [Arthroderma gypseum CBS 118893]
Length = 152
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 47/68 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ TT + L + FSQFG + EA ++ D+ NRS+G+G+V FS+E EA AL MN +
Sbjct: 11 LAWHTTDDTLREGFSQFGTIEEAIVVKDRDTNRSRGFGFVRFSSEAEADAALNAMNNQEF 70
Query: 61 DGRVIFVD 68
DGRVI VD
Sbjct: 71 DGRVIRVD 78
>gi|357445711|ref|XP_003593133.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355482181|gb|AES63384.1| Glycine-rich RNA-binding protein [Medicago truncatula]
Length = 491
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 31/72 (43%), Positives = 50/72 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ST+ L DAF ++G++ EA +++DK RS+G+G+VTF +E ++A+ MNG L
Sbjct: 236 LAWSTSDRRLKDAFEKYGKLVEAKVVVDKFSGRSRGFGFVTFDDKEAMEEAIEAMNGIDL 295
Query: 61 DGRVIFVDNVRP 72
DGR I VD +P
Sbjct: 296 DGRTITVDKAQP 307
>gi|118487563|gb|ABK95608.1| unknown [Populus trichocarpa]
Length = 133
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
Query: 3 FSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDG 62
+ST + L DAFS FG+VTEA +IMD+ RS+G+G+V + + E A +AL+ M+G+ L G
Sbjct: 45 WSTDDQTLKDAFSGFGEVTEARVIMDRETGRSRGFGFVHYDSVENASEALSAMDGQNLGG 104
Query: 63 RVI---FVDNVRPSRRYNTDAPLAR 84
R + F + RP + YN + +R
Sbjct: 105 RTVRVSFAEERRPPQSYNDNHQGSR 129
>gi|378727388|gb|EHY53847.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 179
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 50/73 (68%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ TT E L + FSQFG + EA ++ D+ NRS+G+G+V F+T+ EA +A+ MN
Sbjct: 9 LAWHTTDETLYEGFSQFGNIEEAVVVKDRDTNRSRGFGFVRFATKAEADEAMQRMNNTQF 68
Query: 61 DGRVIFVDNVRPS 73
DGR+I VD+ + S
Sbjct: 69 DGRLIRVDHAQDS 81
>gi|115474735|ref|NP_001060964.1| Os08g0139000 [Oryza sativa Japonica Group]
gi|38636774|dbj|BAD03017.1| putative RNA recognition motif (RRM)-containing protein [Oryza
sativa Japonica Group]
gi|113622933|dbj|BAF22878.1| Os08g0139000 [Oryza sativa Japonica Group]
gi|215767574|dbj|BAG99802.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222639884|gb|EEE68016.1| hypothetical protein OsJ_25986 [Oryza sativa Japonica Group]
Length = 141
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 52/89 (58%), Gaps = 11/89 (12%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
TT + L +AF++FG+V A ++ D+ SKG+G+V ++T E+A K + M+GK LDG V
Sbjct: 47 TTTDGLKEAFAKFGEVIHARVVTDRVTGFSKGFGFVRYATVEDAAKGIEGMDGKFLDGWV 106
Query: 65 IFVDNVRPSRRYNTDAPLARQLPQSPEEN 93
IF + RP R PQ PE N
Sbjct: 107 IFAEYARP-----------RTPPQQPEMN 124
>gi|116781810|gb|ABK22248.1| unknown [Picea sitchensis]
Length = 215
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 48/72 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ST+ L DAF +FG + EA +++D+ RS+G+G+VTF ++ + A+ M+G L
Sbjct: 14 LSWSTSDRTLEDAFHKFGHLIEAKVVVDRDTGRSRGFGFVTFDDKKSMEDAIDSMHGMSL 73
Query: 61 DGRVIFVDNVRP 72
DGR I VD RP
Sbjct: 74 DGRSITVDRARP 85
>gi|224115158|ref|XP_002316957.1| predicted protein [Populus trichocarpa]
gi|222860022|gb|EEE97569.1| predicted protein [Populus trichocarpa]
Length = 153
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 55/93 (59%), Gaps = 11/93 (11%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S TT E L +AFS+FG+V +A ++ D+ SKG+G+V ++T E+A + + M+G+ L
Sbjct: 62 LSKRTTSEGLQEAFSKFGEVVQARVVTDRVSGYSKGFGFVKYATLEDAAEGIKGMDGQFL 121
Query: 61 DGRVIFVDNVRPSRRYNTDAPLARQLPQSPEEN 93
DG VIF + RP RQ P P+ N
Sbjct: 122 DGWVIFAEYARP-----------RQPPSEPQNN 143
>gi|388494768|gb|AFK35450.1| unknown [Medicago truncatula]
Length = 176
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
VS+ST + L +AFS++G V +A IIMD+ RS+G+G++TF+T EEA AL M+ K L
Sbjct: 47 VSYSTDETGLREAFSRYGDVLDAKIIMDRDTGRSRGFGFITFATSEEASSALQAMDNKEL 106
Query: 61 DGRVIFVD 68
DGR + V+
Sbjct: 107 DGRTVRVN 114
>gi|238011394|gb|ACR36732.1| unknown [Zea mays]
Length = 149
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L +AFS +G+V E+ II+D+ RS+G+G+VTFSTEE + A+ MNGK L
Sbjct: 15 LAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEGMNGKEL 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRNITVN 82
>gi|219888685|gb|ACL54717.1| unknown [Zea mays]
gi|414869098|tpg|DAA47655.1| TPA: glycine-rich protein1 [Zea mays]
Length = 144
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L +AFS +G+V E+ II+D+ RS+G+G+VTFSTEE + A+ MNGK L
Sbjct: 15 LAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEGMNGKEL 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRNITVN 82
>gi|218200448|gb|EEC82875.1| hypothetical protein OsI_27755 [Oryza sativa Indica Group]
Length = 141
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 11/89 (12%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
TT + L +AF++FG+V A ++ D+ SKG+G++ ++T E+A K + M+GK LDG V
Sbjct: 47 TTTDGLKEAFAKFGEVIHARVVTDRVTGFSKGFGFIRYATVEDAAKGIEGMDGKFLDGWV 106
Query: 65 IFVDNVRPSRRYNTDAPLARQLPQSPEEN 93
IF + RP R PQ PE N
Sbjct: 107 IFAEYARP-----------RTPPQQPEMN 124
>gi|195612516|gb|ACG28088.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|414869096|tpg|DAA47653.1| TPA: glycine-rich protein1 isoform 1 [Zea mays]
gi|414869097|tpg|DAA47654.1| TPA: glycine-rich protein1 isoform 2 [Zea mays]
Length = 155
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L +AFS +G+V E+ II+D+ RS+G+G+VTFSTEE + A+ MNGK L
Sbjct: 15 LAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEGMNGKEL 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRNITVN 82
>gi|195609654|gb|ACG26657.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195612080|gb|ACG27870.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195612572|gb|ACG28116.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 156
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L +AFS +G+V E+ II+D+ RS+G+G+VTFSTEE + A+ MNGK L
Sbjct: 15 LAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEGMNGKEL 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRNITVN 82
>gi|449468518|ref|XP_004151968.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
gi|449496932|ref|XP_004160266.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
Length = 174
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
TT E L +AF++FG+V A ++ D+ SKG+G+V ++T E+A K + M+GK LDG V
Sbjct: 90 TTTEKLHEAFAKFGEVAHARVVTDRVTGYSKGFGFVKYATLEDAAKGIEGMDGKFLDGWV 149
Query: 65 IFVDNVRP 72
IF + RP
Sbjct: 150 IFAEYARP 157
>gi|255944269|ref|XP_002562902.1| Pc20g03510 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587637|emb|CAP85680.1| Pc20g03510 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 151
Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T+ + L + F QFG++ EA ++ D+ RS+G+G+V F+T+ EA AL MN +
Sbjct: 6 LSWHTSDDTLREGFQQFGEIQEAIVVKDRATQRSRGFGFVRFATDAEADAALGAMNNQEF 65
Query: 61 DGRVIFVDNV--RPSR 74
DGRVI VD RP R
Sbjct: 66 DGRVIRVDKAFDRPQR 81
>gi|119177425|ref|XP_001240490.1| hypothetical protein CIMG_07653 [Coccidioides immitis RS]
gi|320032129|gb|EFW14085.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
gi|392867546|gb|EAS29215.2| hypothetical protein CIMG_07653 [Coccidioides immitis RS]
Length = 147
Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ TT E L FS+FG + EA ++ D+ NRS+G+G+V F++E EA+ A+ +MN +
Sbjct: 9 LAWHTTDETLRQGFSKFGSIEEAIVVKDRDTNRSRGFGFVRFASEGEAEAAMNEMNNQEF 68
Query: 61 DGRVIFVDNV--RPS 73
DGR I VD RPS
Sbjct: 69 DGRTIRVDKAADRPS 83
>gi|223942615|gb|ACN25391.1| unknown [Zea mays]
Length = 120
Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L +AFS +G+V E+ II+D+ RS+G+G+VTFSTEE + A+ MNGK L
Sbjct: 15 LAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEGMNGKEL 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRNITVN 82
>gi|15231311|ref|NP_190188.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|7630030|emb|CAB88326.1| RNA binding protein-like [Arabidopsis thaliana]
gi|46931202|gb|AAT06405.1| At3g46020 [Arabidopsis thaliana]
gi|50253530|gb|AAT71967.1| At3g46020 [Arabidopsis thaliana]
gi|332644581|gb|AEE78102.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 102
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S TT + L FS FGQ+ EA +I D R KG+G++TF +E++A+KAL ++GK++
Sbjct: 14 LSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFDSEDDARKALKSLDGKIV 73
Query: 61 DGRVIFVD 68
DGR+IFV+
Sbjct: 74 DGRLIFVE 81
>gi|303315989|ref|XP_003067999.1| Glycine-rich RNA-binding protein 2, mitochondrial precursor ,
putative [Coccidioides posadasii C735 delta SOWgp]
gi|240107675|gb|EER25854.1| Glycine-rich RNA-binding protein 2, mitochondrial precursor ,
putative [Coccidioides posadasii C735 delta SOWgp]
Length = 117
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ TT E L FS+FG + EA ++ D+ NRS+G+G+V F++E EA+ A+ +MN +
Sbjct: 9 LAWHTTDETLRQGFSKFGSIEEAIVVKDRDTNRSRGFGFVRFASEGEAEAAMNEMNNQEF 68
Query: 61 DGRVIFVDNV--RPS 73
DGR I VD RPS
Sbjct: 69 DGRTIRVDKAADRPS 83
>gi|223974749|gb|ACN31562.1| unknown [Zea mays]
Length = 326
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L +AFS +G+V E+ II+D+ RS+G+G+VTFSTEE + A+ MNGK L
Sbjct: 15 LAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEGMNGKEL 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRNITVN 82
>gi|383760540|ref|YP_005439526.1| RNP-1 like RNA-binding protein, Glycine-rich [Rubrivivax
gelatinosus IL144]
gi|381381210|dbj|BAL98027.1| RNP-1 like RNA-binding protein, Glycine-rich [Rubrivivax
gelatinosus IL144]
Length = 161
Score = 70.9 bits (172), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++S + L AF+QFG VT A ++MD+ RSKG+G+V ++ EAQ A+ MNG+ L
Sbjct: 10 LAYSVRDDSLQQAFAQFGTVTSAKVMMDRETGRSKGFGFVEMGSDAEAQAAINGMNGQPL 69
Query: 61 DGRVIFVDNVRP 72
+GR I V+ RP
Sbjct: 70 EGRAIVVNEARP 81
>gi|46139099|ref|XP_391240.1| hypothetical protein FG11064.1 [Gibberella zeae PH-1]
Length = 127
Score = 70.9 bits (172), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 54/75 (72%), Gaps = 2/75 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++TT E L FS+FG+VT++ I+ D+ R++G+G+VTFSTEE+A A+ +N + L
Sbjct: 9 LSWNTTDETLRQTFSEFGEVTDSIIMRDRDTGRARGFGFVTFSTEEQATAAVDALNEQEL 68
Query: 61 DGRVIFVD--NVRPS 73
DGR I V+ N RP+
Sbjct: 69 DGRRIRVNVANARPA 83
>gi|449494871|ref|XP_004159670.1| PREDICTED: cold-inducible RNA-binding protein B-like [Cucumis
sativus]
Length = 95
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
TT E L + FS FG ++EA +I D R KG+G+VTF + EA+KAL M+G+++DGR+
Sbjct: 18 TTLERLKNLFSPFGSISEARLIRDPKTERPKGFGFVTFQSPAEAKKALKAMDGRIVDGRL 77
Query: 65 IFVD 68
IFV+
Sbjct: 78 IFVE 81
>gi|297830792|ref|XP_002883278.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297329118|gb|EFH59537.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 376
Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 35/77 (45%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T+++ L AF FG++ E IIMDK RSKGY ++ ++TEE A AL +MNGK++
Sbjct: 291 LSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFLEYTTEEAASAALKEMNGKII 350
Query: 61 DGRVIFVD--NVRPSRR 75
+G +I VD +P R+
Sbjct: 351 NGWMIVVDVAKTKPFRQ 367
>gi|255584774|ref|XP_002533105.1| cold-inducible RNA binding protein, putative [Ricinus communis]
gi|223527096|gb|EEF29277.1| cold-inducible RNA binding protein, putative [Ricinus communis]
Length = 94
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 48/68 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S TT + L FS FG V EA +++D + KG+G+VTF +E +AQKAL MNG+++
Sbjct: 14 LSCYTTNQKLEKLFSPFGIVKEARLVLDPRTQKPKGFGFVTFDSESQAQKALKAMNGRIV 73
Query: 61 DGRVIFVD 68
DGR++FV+
Sbjct: 74 DGRLLFVE 81
>gi|357457429|ref|XP_003598995.1| 28 kDa ribonucleoprotein [Medicago truncatula]
gi|355488043|gb|AES69246.1| 28 kDa ribonucleoprotein [Medicago truncatula]
Length = 447
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 55/74 (74%), Gaps = 2/74 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++T ++ L+DAFS++GQV +A IIMD+ RSKG+G+VT++T EEA A+ ++G+ L
Sbjct: 51 ISYNTDEQSLSDAFSKYGQVLDARIIMDRESGRSKGFGFVTYNTVEEASSAIQALDGQDL 110
Query: 61 DGRVIFVD--NVRP 72
GR + V+ N RP
Sbjct: 111 YGRRVGVNFANERP 124
>gi|118474079|ref|YP_892397.1| RNA-binding region RNP-1 [Campylobacter fetus subsp. fetus 82-40]
gi|424821065|ref|ZP_18246103.1| RNA-binding region RNP-1 [Campylobacter fetus subsp. venerealis
NCTC 10354]
gi|118413305|gb|ABK81725.1| RNA-binding region RNP-1 [Campylobacter fetus subsp. fetus 82-40]
gi|342327844|gb|EGU24328.1| RNA-binding region RNP-1 [Campylobacter fetus subsp. venerealis
NCTC 10354]
Length = 82
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 49/72 (68%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T+ L + FS FG+VT A I+ DK NRSKG+G+V S++E+A+KA+ NGK +
Sbjct: 9 LSYRMTESELREVFSSFGEVTRAKIVKDKETNRSKGFGFVEMSSDEQAKKAIEGTNGKEV 68
Query: 61 DGRVIFVDNVRP 72
GR + V+ RP
Sbjct: 69 GGRALRVNEARP 80
>gi|388492070|gb|AFK34101.1| unknown [Lotus japonicus]
Length = 211
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 50/72 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ST+ L DAF +FG++TEA +++DK RS+G+G+VTF ++ +A+ MNG L
Sbjct: 14 LAWSTSDRKLKDAFEKFGKLTEAKVVVDKFSGRSRGFGFVTFDDKKAMDEAIDAMNGMDL 73
Query: 61 DGRVIFVDNVRP 72
DGR I VD +P
Sbjct: 74 DGRTITVDKTQP 85
>gi|294464377|gb|ADE77701.1| unknown [Picea sitchensis]
Length = 299
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 51/74 (68%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ +E+L + FS+ G + +A I+ D+ RS+G+G++TFST+ EA+ A+A +NGK L
Sbjct: 223 LSWDVNEEILNEVFSEHGNLLDAKIVFDRETGRSRGFGFITFSTQSEAEAAVASLNGKEL 282
Query: 61 DGRVIFVDNVRPSR 74
+GR + VD SR
Sbjct: 283 EGRAMRVDLALSSR 296
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%)
Query: 3 FSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDG 62
FS LA + G V +I D+ RS+G+ + T S+ E+A + +++G G
Sbjct: 120 FSCDSAELAGIIQEHGSVEMVEVIYDQNTGRSRGFAFATMSSVEDANALVENLDGSQYGG 179
Query: 63 RVIFVD 68
R + V+
Sbjct: 180 RTLRVN 185
>gi|34785785|gb|AAH57481.1| Cirbp protein [Danio rerio]
Length = 121
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 51/68 (75%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ TT++ L +AFS++G + + +I D+ +RS+G+G+VTF E+A+ A+A MNGK +
Sbjct: 5 LSYDTTEQSLEEAFSKYGTIAKVDVIRDRETDRSRGFGFVTFENPEDAKDAMAAMNGKQV 64
Query: 61 DGRVIFVD 68
DGR+I VD
Sbjct: 65 DGRMIRVD 72
>gi|326493798|dbj|BAJ85361.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 175
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 51/74 (68%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L AFSQ+G++ +A II D+ RS+G+G+VTF +EE ++A+ +MNGK L
Sbjct: 13 LAWATDDHNLQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMRQAIEEMNGKEL 72
Query: 61 DGRVIFVDNVRPSR 74
DGR I V+ + R
Sbjct: 73 DGRSITVNEAQSRR 86
>gi|392578419|gb|EIW71547.1| hypothetical protein TREMEDRAFT_56482 [Tremella mesenterica DSM
1558]
Length = 223
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 54/75 (72%), Gaps = 2/75 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++TT + L DAF QFGQV ++ ++ D+ RS+G+G+VTFST EEA+ ++ MN + L
Sbjct: 11 LSWNTTDDTLRDAFMQFGQVLDSIVMKDRETGRSRGFGFVTFSTAEEAEISIQQMNEQPL 70
Query: 61 DGRVIFVD--NVRPS 73
DGR I V+ N +P+
Sbjct: 71 DGRNIRVNMANAKPA 85
>gi|388511641|gb|AFK43882.1| unknown [Lotus japonicus]
Length = 211
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 50/72 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ST+ L DAF +FG++TEA +++DK RS+G+G+VTF ++ +A+ MNG L
Sbjct: 14 LAWSTSDRKLKDAFEKFGKLTEAKVVVDKFSGRSRGFGFVTFDDKKAMDEAIDAMNGMDL 73
Query: 61 DGRVIFVDNVRP 72
DGR I VD +P
Sbjct: 74 DGRTITVDKAQP 85
>gi|302809382|ref|XP_002986384.1| hypothetical protein SELMODRAFT_49298 [Selaginella
moellendorffii]
gi|300145920|gb|EFJ12593.1| hypothetical protein SELMODRAFT_49298 [Selaginella
moellendorffii]
Length = 145
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++TT L DAFS +G V EA +++D+ RS+G+G+VTF E Q A+ M+GK L
Sbjct: 9 LSWATTDRNLEDAFSPYGTVIEAKVVLDRDTERSRGFGFVTFGDENSMQDAIDGMHGKDL 68
Query: 61 DGRVIFVDNVRP 72
DGR I V +P
Sbjct: 69 DGRSITVSKAQP 80
>gi|223647416|gb|ACN10466.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 193
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 48/68 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF TT+E LA+AF+++G + + +I DK RS+G+G+V + E+A+ AL MNGK +
Sbjct: 12 LSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDALEGMNGKSV 71
Query: 61 DGRVIFVD 68
DGR I VD
Sbjct: 72 DGRTIRVD 79
>gi|194337130|ref|YP_002018924.1| RNP-1 like RNA-binding protein [Pelodictyon phaeoclathratiforme
BU-1]
gi|194309607|gb|ACF44307.1| RNP-1 like RNA-binding protein [Pelodictyon phaeoclathratiforme
BU-1]
Length = 90
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 50/72 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++ T++ L DAFS+FGQV A+II DK RSKG+G+V E EA++A+ MN K L
Sbjct: 8 LAYTVTEDDLRDAFSEFGQVESASIINDKFSGRSKGFGFVDMPNESEAREAIESMNEKDL 67
Query: 61 DGRVIFVDNVRP 72
+GR I V+ +P
Sbjct: 68 NGRTIKVNEAKP 79
>gi|336371226|gb|EGN99565.1| hypothetical protein SERLA73DRAFT_159820 [Serpula lacrymans var.
lacrymans S7.3]
Length = 127
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 55/74 (74%), Gaps = 2/74 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+STT + L +AFS++GQV ++ ++ D+ RS+G+G+VTFS+E+EA+ A+ ++ + L
Sbjct: 10 LSWSTTDDTLREAFSEYGQVVDSIVMRDRETGRSRGFGFVTFSSEQEAEAAINSLHEQDL 69
Query: 61 DGRVIFVD--NVRP 72
DGR I V+ N RP
Sbjct: 70 DGRRIKVNLANARP 83
>gi|18402803|ref|NP_566672.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|20466724|gb|AAM20679.1| unknown protein [Arabidopsis thaliana]
gi|21536799|gb|AAM61131.1| unknown [Arabidopsis thaliana]
gi|25084257|gb|AAN72206.1| unknown protein [Arabidopsis thaliana]
gi|332642921|gb|AEE76442.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 374
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/77 (45%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T+++ L AF FG++ E IIMDK RSKGY ++ ++TEE A AL +MNGK++
Sbjct: 289 LSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFLEYTTEEAAGTALKEMNGKII 348
Query: 61 DGRVIFVD--NVRPSRR 75
+G +I VD +P R+
Sbjct: 349 NGWMIVVDVAKTKPFRQ 365
>gi|303668381|gb|ADM16300.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 121
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 48/68 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF TT+E LA+AF+++G + + +I DK RS+G+G+V + E+A+ AL MNGK +
Sbjct: 12 LSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDALDGMNGKSV 71
Query: 61 DGRVIFVD 68
DGR I VD
Sbjct: 72 DGRTIRVD 79
>gi|45544646|ref|NP_956311.1| cold inducible RNA binding protein isoform 2 [Danio rerio]
gi|28856196|gb|AAH48027.1| Cold inducible RNA binding protein [Danio rerio]
gi|182891172|gb|AAI64022.1| Cirbp protein [Danio rerio]
Length = 184
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 51/68 (75%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ TT++ L +AFS++G + + +I D+ +RS+G+G+VTF E+A+ A+A MNGK +
Sbjct: 12 LSYDTTEQSLEEAFSKYGTIAKVDVIRDRETDRSRGFGFVTFENPEDAKDAMAAMNGKQV 71
Query: 61 DGRVIFVD 68
DGR+I VD
Sbjct: 72 DGRMIRVD 79
>gi|297793541|ref|XP_002864655.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297310490|gb|EFH40914.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 95
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S TT + L F+ FGQ+ EA +I D+ R KG+G++TF +E++AQ AL +NGK++
Sbjct: 14 LSAYTTDQSLRQLFAPFGQIIEARLIRDQQTQRPKGFGFITFESEDDAQNALKALNGKIV 73
Query: 61 DGRVIFVD 68
+GR+IFV+
Sbjct: 74 NGRLIFVE 81
>gi|333381249|ref|ZP_08472931.1| hypothetical protein HMPREF9455_01097 [Dysgonomonas gadei ATCC
BAA-286]
gi|332830219|gb|EGK02847.1| hypothetical protein HMPREF9455_01097 [Dysgonomonas gadei ATCC
BAA-286]
Length = 107
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 44/72 (61%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+S L D FS++G++T A +IMDK RSKGYG+V + QKA+ ++NG
Sbjct: 8 LSYSINDNDLKDLFSEYGEITSAKVIMDKATGRSKGYGFVELADNAAGQKAIEELNGAEY 67
Query: 61 DGRVIFVDNVRP 72
DGR I V RP
Sbjct: 68 DGRTISVSEARP 79
>gi|225423629|ref|XP_002274983.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
gi|359473083|ref|XP_003631246.1| PREDICTED: glycine-rich RNA-binding protein 2-like [Vitis vinifera]
gi|297738010|emb|CBI27211.3| unnamed protein product [Vitis vinifera]
gi|297738011|emb|CBI27212.3| unnamed protein product [Vitis vinifera]
Length = 140
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 50/74 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++T+K L + FS+FGQ+ E ++ DK R +GY ++ +++++ A AL +M+ K L
Sbjct: 45 LSYATSKSSLQEEFSKFGQIVEVDVVKDKAAKRPRGYAFIQYTSQDHAMLALENMDHKYL 104
Query: 61 DGRVIFVDNVRPSR 74
DGRV+ V+ +P +
Sbjct: 105 DGRVVCVELAKPGK 118
>gi|356550257|ref|XP_003543504.1| PREDICTED: cold-inducible RNA-binding protein-like [Glycine max]
Length = 86
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 48/68 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF TT+E L FS FG VT+A + +D R KG+G+V+F +E EA+KA MNG+++
Sbjct: 14 LSFYTTQEQLKKLFSPFGLVTQADLALDPITKRPKGFGFVSFKSEIEAEKACKAMNGRIV 73
Query: 61 DGRVIFVD 68
+GR+I V+
Sbjct: 74 NGRLILVE 81
>gi|302814001|ref|XP_002988685.1| hypothetical protein SELMODRAFT_18499 [Selaginella
moellendorffii]
gi|300143506|gb|EFJ10196.1| hypothetical protein SELMODRAFT_18499 [Selaginella
moellendorffii]
Length = 135
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++TT L DAFS +G V EA +++D+ RS+G+G+VTF E Q A+ M+GK L
Sbjct: 15 LSWATTDRNLEDAFSPYGTVIEAKVVLDRDTERSRGFGFVTFGDENSMQDAIDGMHGKDL 74
Query: 61 DGRVIFVDNVRP 72
DGR I V +P
Sbjct: 75 DGRSITVSKAQP 86
>gi|242046266|ref|XP_002461004.1| hypothetical protein SORBIDRAFT_02g039025 [Sorghum bicolor]
gi|241924381|gb|EER97525.1| hypothetical protein SORBIDRAFT_02g039025 [Sorghum bicolor]
Length = 83
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF TT+E D FS FG V EA ++ D+ R KG+G+V +S++ EA+KA+ M+G++L
Sbjct: 13 LSFYTTEEEFKDVFSSFGTVEEARLMRDQQTGRIKGFGFVKYSSQAEAEKAVKAMDGRIL 72
Query: 61 DGRVIFVD 68
GR+IFV+
Sbjct: 73 RGRLIFVE 80
>gi|974605|gb|AAA75104.1| single-stranded nucleic acid binding protein [Triticum aestivum]
Length = 167
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 51/74 (68%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L AFSQ+G++ +A II D+ RS+G+G+VTF +EE ++A+ +MNGK L
Sbjct: 13 LAWATDDNNLQQAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMRQAIEEMNGKEL 72
Query: 61 DGRVIFVDNVRPSR 74
DGR I V+ + R
Sbjct: 73 DGRNITVNEAQSRR 86
>gi|167383625|ref|XP_001736605.1| cold-inducible RNA-binding protein [Entamoeba dispar SAW760]
gi|165900936|gb|EDR27150.1| cold-inducible RNA-binding protein, putative [Entamoeba dispar
SAW760]
Length = 138
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 50/72 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++S T E L AF +FG VT+ ++ D+ RSKG+G+VTF +E+A+KA+ +MN + L
Sbjct: 9 LAYSVTDESLRAAFEKFGTVTDCKVVTDRESQRSKGFGFVTFEKDEDAKKAIEEMNEQEL 68
Query: 61 DGRVIFVDNVRP 72
+GR I VD +P
Sbjct: 69 EGRRIKVDVSKP 80
>gi|226532482|ref|NP_001150574.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|195640298|gb|ACG39617.1| glycine-rich RNA-binding protein 7 [Zea mays]
Length = 253
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 49/70 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T L D F+++GQV EA II+D+ RS+G+G++T+++ EEA A+ M+GK L
Sbjct: 41 LSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTSSEEASAAITAMDGKTL 100
Query: 61 DGRVIFVDNV 70
DGR I V++
Sbjct: 101 DGRNIRVNHA 110
>gi|402217291|gb|EJT97372.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731
SS1]
Length = 167
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++T + L AFSQFGQV + ++ D+ RS+G+G+VTF T +EAQ A+ +N + L
Sbjct: 20 LSWNTNDDTLRSAFSQFGQVLDCIVMKDRESGRSRGFGFVTFGTSQEAQAAIDGLNEQDL 79
Query: 61 DGRVIFVD--NVRP 72
DGR I V+ N RP
Sbjct: 80 DGRRIRVNLANARP 93
>gi|259486065|tpe|CBF83611.1| TPA: glycine-rich RNA-binding protein, putative (AFU_orthologue;
AFUA_3G08580) [Aspergillus nidulans FGSC A4]
Length = 128
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ TT ++L + FS++G + EA ++ D+ NRS+G+G+V F++E EA A+ MN +
Sbjct: 9 LAWHTTDDVLREGFSRYGTIEEAVVVKDRDTNRSRGFGFVRFASEPEADAAMGAMNNQEF 68
Query: 61 DGRVIFVDNV--RPSRR 75
DGR+I VD RP+ R
Sbjct: 69 DGRIIRVDKASERPAAR 85
>gi|62857699|ref|NP_001017228.1| cold-inducible RNA-binding protein [Xenopus (Silurana)
tropicalis]
gi|123910273|sp|Q28IQ9.1|CIRBP_XENTR RecName: Full=Cold-inducible RNA-binding protein; AltName:
Full=Glycine-rich RNA-binding protein CIRP
gi|89268649|emb|CAJ83306.1| cold inducible RNA binding protein [Xenopus (Silurana)
tropicalis]
Length = 166
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F TT+E L FS++GQV E ++ D+ RS+G+G+VTF E+A+ A+ MNGK +
Sbjct: 13 LNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|255565552|ref|XP_002523766.1| dc50, putative [Ricinus communis]
gi|223536978|gb|EEF38615.1| dc50, putative [Ricinus communis]
Length = 210
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 50/72 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ST+ L +AF +FG + EA +++DK RS+G+G+VTF ++ ++A+ +MNG L
Sbjct: 14 LSWSTSDRGLKEAFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEEAIEEMNGMDL 73
Query: 61 DGRVIFVDNVRP 72
DGR I VD +P
Sbjct: 74 DGRTITVDKAQP 85
>gi|121705230|ref|XP_001270878.1| glycine-rich RNA-binding protein, putative [Aspergillus clavatus
NRRL 1]
gi|119399024|gb|EAW09452.1| glycine-rich RNA-binding protein, putative [Aspergillus clavatus
NRRL 1]
Length = 133
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ TT + L F QFGQV EA ++ D+ NRS+G+G+V FS++ +A KA+ MN +
Sbjct: 9 LAWHTTDDALRQGFEQFGQVEEAIVVKDRDTNRSRGFGFVRFSSDSDADKAMDAMNNQEF 68
Query: 61 DGRVIFVD 68
DGR I VD
Sbjct: 69 DGRTIRVD 76
>gi|425781282|gb|EKV19258.1| hypothetical protein PDIG_04180 [Penicillium digitatum PHI26]
gi|425783364|gb|EKV21218.1| hypothetical protein PDIP_08850 [Penicillium digitatum Pd1]
Length = 162
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T+ + L + F QFG++ EA ++ D+ RS+G+G+V F+T+ EA AL MN +
Sbjct: 9 LSWHTSDDTLREGFQQFGEIQEAIVVKDRATLRSRGFGFVRFATDAEADSALGAMNNQEF 68
Query: 61 DGRVIFVDNV--RPSR 74
DGRVI VD RP R
Sbjct: 69 DGRVIRVDKAFDRPQR 84
>gi|449435011|ref|XP_004135289.1| PREDICTED: cold-inducible RNA-binding protein B-like isoform 1
[Cucumis sativus]
gi|449435013|ref|XP_004135290.1| PREDICTED: cold-inducible RNA-binding protein B-like isoform 2
[Cucumis sativus]
Length = 89
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
TT E L + FS FG ++EA +I D R KG+G+VTF + EA+KAL M+G+++DGR+
Sbjct: 18 TTLERLKNLFSPFGSISEARLIRDPKTERPKGFGFVTFQSPAEAKKALKAMDGRIVDGRL 77
Query: 65 IFVD 68
IFV+
Sbjct: 78 IFVE 81
>gi|115529229|dbj|BAF34340.1| putative glycine-rich RNA-binding protein [Dianthus caryophyllus]
Length = 163
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 50/68 (73%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T LA+AF++FG+VT++ II D+ RS+G+G+VTF+ E+ + A+ +MNGK L
Sbjct: 13 LSWGTDDRSLAEAFNKFGEVTDSKIINDRETGRSRGFGFVTFANEQSMRDAIDEMNGKEL 72
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 73 DGRSITVN 80
>gi|375144786|ref|YP_005007227.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
gi|361058832|gb|AEV97823.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
Length = 102
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 49/72 (68%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F + LA FSQ+GQV+ A +IMD+ RS+G+G+V S++EEA+KA+ ++ GK +
Sbjct: 8 LGFQVNDDDLAKLFSQYGQVSSAKVIMDRETGRSRGFGFVEMSSDEEARKAIKELEGKPV 67
Query: 61 DGRVIFVDNVRP 72
+GR + V RP
Sbjct: 68 EGRSLSVSEARP 79
>gi|356543191|ref|XP_003540046.1| PREDICTED: nucleolin-like [Glycine max]
Length = 145
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 45/68 (66%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
TT E L + F++FG+V A ++ D+ SKG+G+V ++T EEA K + M+GK LDG V
Sbjct: 60 TTTERLREEFAKFGEVVHARVVTDRVSGYSKGFGFVQYATIEEAAKGIEGMDGKFLDGWV 119
Query: 65 IFVDNVRP 72
IF + RP
Sbjct: 120 IFAEYARP 127
>gi|297814870|ref|XP_002875318.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321156|gb|EFH51577.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 247
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 49/72 (68%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ST+ L DAF ++G + EA +++DK RS+G+G++TF ++ +A+A MNG L
Sbjct: 14 LAWSTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMDEAIAAMNGMDL 73
Query: 61 DGRVIFVDNVRP 72
DGR I VD +P
Sbjct: 74 DGRTITVDKAQP 85
>gi|357126492|ref|XP_003564921.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 156
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T L +AFS FG+V EA +I D+ RS+G+G+V FS EE+A+KA + M+G+ L
Sbjct: 44 LSWGTNDGSLKEAFSSFGEVYEARVITDRETGRSRGFGFVEFSNEEDAKKAASSMDGQEL 103
Query: 61 DGRVIFVD--NVRPS 73
DGR + V+ N RP+
Sbjct: 104 DGRSVRVNFANERPA 118
>gi|242084350|ref|XP_002442600.1| hypothetical protein SORBIDRAFT_08g022740 [Sorghum bicolor]
gi|241943293|gb|EES16438.1| hypothetical protein SORBIDRAFT_08g022740 [Sorghum bicolor]
Length = 165
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 48/68 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L AFS +G+V E+ II+D+ RS+G+G+VTFSTEE + A+ MNGK L
Sbjct: 15 LAWATDDNSLHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKEL 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRNITVN 82
>gi|363543257|ref|NP_001241843.1| uncharacterized protein LOC100857047 [Zea mays]
gi|238007748|gb|ACR34909.1| unknown [Zea mays]
gi|413916459|gb|AFW56391.1| putative glycine-rich protein [Zea mays]
Length = 261
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 49/70 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T L D F+++GQV EA II+D+ RS+G+G++T+++ EEA A+ M+GK L
Sbjct: 38 LSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTSSEEASAAITAMDGKTL 97
Query: 61 DGRVIFVDNV 70
DGR I V++
Sbjct: 98 DGRNIRVNHA 107
>gi|224060337|ref|XP_002300149.1| predicted protein [Populus trichocarpa]
gi|222847407|gb|EEE84954.1| predicted protein [Populus trichocarpa]
Length = 133
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Query: 3 FSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDG 62
+S + L DAFS FG+VTEA +IMD+ RS+G+G+V + + E A +AL+ M+G+ L G
Sbjct: 45 WSADDQTLKDAFSGFGEVTEARVIMDRETGRSRGFGFVHYDSVENASEALSAMDGQNLGG 104
Query: 63 RVI---FVDNVRPSRRYNTDAPLAR 84
R + F + RP + YN + +R
Sbjct: 105 RTVRVSFAEERRPPQSYNDNHQGSR 129
>gi|67525063|ref|XP_660593.1| hypothetical protein AN2989.2 [Aspergillus nidulans FGSC A4]
gi|40744384|gb|EAA63560.1| hypothetical protein AN2989.2 [Aspergillus nidulans FGSC A4]
Length = 118
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ TT ++L + FS++G + EA ++ D+ NRS+G+G+V F++E EA A+ MN +
Sbjct: 9 LAWHTTDDVLREGFSRYGTIEEAVVVKDRDTNRSRGFGFVRFASEPEADAAMGAMNNQEF 68
Query: 61 DGRVIFVDNV--RPSRR 75
DGR+I VD RP+ R
Sbjct: 69 DGRIIRVDKASERPAAR 85
>gi|406997918|gb|EKE15908.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 93
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 46/72 (63%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ +STT+E L + FSQ G V A II D+ RSKG+G+V STEE AQKA+ +GK
Sbjct: 10 LPYSTTEESLGEHFSQAGAVESANIITDRMSGRSKGFGFVEMSTEEGAQKAIEMFHGKEF 69
Query: 61 DGRVIFVDNVRP 72
GR + V+ RP
Sbjct: 70 GGRTLTVNEARP 81
>gi|357122488|ref|XP_003562947.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
[Brachypodium distachyon]
Length = 138
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 53/85 (62%), Gaps = 8/85 (9%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
TT + L +AFS+FGQVTEA +I D+ S+G+G+V ++T EEA + + M+GK LDG V
Sbjct: 51 TTTDGLREAFSKFGQVTEARVITDRISGYSRGFGFVKYATVEEAGEGIKGMDGKFLDGWV 110
Query: 65 IFVDNVRPSRRYNTDAPLARQLPQS 89
IF + + A+Q PQS
Sbjct: 111 IFAEYAKQRE--------AQQPPQS 127
>gi|293336981|ref|NP_001169115.1| uncharacterized protein LOC100382959 [Zea mays]
gi|223975005|gb|ACN31690.1| unknown [Zea mays]
gi|414887554|tpg|DAA63568.1| TPA: hypothetical protein ZEAMMB73_633512 [Zea mays]
Length = 103
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 48/68 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF TT+E D FS FG V EA ++ D R KG+G+V +S++ EA+KA+ M+GK+L
Sbjct: 28 LSFYTTEEEFKDIFSPFGTVEEARLMRDHQTGRMKGFGFVKYSSQAEAEKAVKAMDGKIL 87
Query: 61 DGRVIFVD 68
GR+IFV+
Sbjct: 88 RGRLIFVE 95
>gi|116747535|ref|YP_844222.1| RNP-1 like RNA-binding protein [Syntrophobacter fumaroxidans
MPOB]
gi|116696599|gb|ABK15787.1| RNP-1 like RNA-binding protein [Syntrophobacter fumaroxidans
MPOB]
Length = 122
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 49/71 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T+ E L + FSQ G V AT++ D+ RS+G+G+V ST+EE QKA+A++NGK
Sbjct: 10 LSFQTSSEQLRELFSQVGTVESATVVEDRESGRSRGFGFVEMSTKEEGQKAIAELNGKDF 69
Query: 61 DGRVIFVDNVR 71
+GR + V+ +
Sbjct: 70 NGRPLTVNEAK 80
>gi|226506948|ref|NP_001149776.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|195633803|gb|ACG36746.1| glycine-rich RNA-binding protein 7 [Zea mays]
Length = 276
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 49/70 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T L D F+++GQV EA II+D+ RS+G+G+VT+++ EEA A+ ++GK L
Sbjct: 37 ISYQTDDHSLRDEFAKYGQVIEARIIIDRESGRSRGFGFVTYTSSEEASAAITALDGKTL 96
Query: 61 DGRVIFVDNV 70
DGR I V++
Sbjct: 97 DGRSIRVNHA 106
>gi|62955567|ref|NP_001017797.1| cold inducible RNA binding protein [Danio rerio]
gi|62202782|gb|AAH93299.1| Zgc:112425 [Danio rerio]
gi|63100518|gb|AAH95030.1| Zgc:112425 [Danio rerio]
gi|182889498|gb|AAI65256.1| Zgc:112425 protein [Danio rerio]
Length = 185
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 48/68 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF TT++ L DAFS++G +T + ++ NRS+G+G+VTF ++A+ AL MNGK +
Sbjct: 12 LSFDTTEQSLEDAFSKYGVITNVHVARNRETNRSRGFGFVTFENPDDAKDALEGMNGKSV 71
Query: 61 DGRVIFVD 68
DGR I VD
Sbjct: 72 DGRTIRVD 79
>gi|224124176|ref|XP_002319264.1| predicted protein [Populus trichocarpa]
gi|118487492|gb|ABK95573.1| unknown [Populus trichocarpa]
gi|222857640|gb|EEE95187.1| predicted protein [Populus trichocarpa]
Length = 149
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 54/93 (58%), Gaps = 11/93 (11%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S TT E L +AFS+FG+V +A ++ D+ SKG+G+V + T E+A + + M+G+ L
Sbjct: 61 LSKRTTTEGLQEAFSKFGEVVQAKVVTDRTSGYSKGFGFVRYGTLEDAAEGIKGMDGQFL 120
Query: 61 DGRVIFVDNVRPSRRYNTDAPLARQLPQSPEEN 93
DG VIF + RP +Q P P+ N
Sbjct: 121 DGWVIFAEYARP-----------KQPPSQPQNN 142
>gi|328767903|gb|EGF77951.1| hypothetical protein BATDEDRAFT_27077 [Batrachochytrium
dendrobatidis JAM81]
Length = 106
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T LADAFSQFG+V ++ ++ D+ RS+G+G+VTFS+ E A A+ MNG+ L
Sbjct: 18 LSWGTDNNSLADAFSQFGEVVDSIVLKDRETGRSRGFGFVTFSSPESASAAVDAMNGQDL 77
Query: 61 DGRVIFVD--NVRPS 73
+GR I V+ N RP+
Sbjct: 78 NGRNIRVNLANERPA 92
>gi|408398205|gb|EKJ77338.1| hypothetical protein FPSE_02416 [Fusarium pseudograminearum
CS3096]
Length = 128
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 54/75 (72%), Gaps = 2/75 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++TT + L FS+FG+VT++ I+ D+ R++G+G+VTFSTEE+A A+ +N + L
Sbjct: 9 LSWNTTDDTLRQTFSEFGEVTDSIIMRDRETGRARGFGFVTFSTEEQANAAVDALNEQEL 68
Query: 61 DGRVIFVD--NVRPS 73
DGR I V+ N RP+
Sbjct: 69 DGRRIRVNVANARPA 83
>gi|302762278|ref|XP_002964561.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
gi|302814304|ref|XP_002988836.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300143407|gb|EFJ10098.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300168290|gb|EFJ34894.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
Length = 149
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 50/68 (73%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ T + L DAFS FG++ E +I D+ RS+G+G+V++ T++EAQKA+ M+G++L
Sbjct: 44 LAWGTEERGLRDAFSPFGEIIEVRVIQDRETGRSRGFGFVSYITDQEAQKAMEAMDGRVL 103
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 104 DGRTIRVN 111
>gi|728594|emb|CAA88558.1| glycine rich protein, RNA binding protein [Hordeum vulgare subsp.
vulgare]
Length = 173
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 51/74 (68%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L AFSQ+G++ +A II D+ RS+G+G+VTF +EE ++A+ +MNGK L
Sbjct: 13 LAWATDDHNLQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMRQAIEEMNGKEL 72
Query: 61 DGRVIFVDNVRPSR 74
DGR + V+ + R
Sbjct: 73 DGRQVTVNEAQSRR 86
>gi|82248148|sp|Q9PTX2.1|CIRBP_RANCA RecName: Full=Cold-inducible RNA-binding protein; Short=BFCIRP;
AltName: Full=Glycine-rich RNA-binding protein CIRP
gi|6682989|dbj|BAA88978.1| BFCIRP [Rana catesbeiana]
Length = 164
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ+ E ++ D+ RS+G+G+VTF E+A+ A+A MNGK +
Sbjct: 13 LSFDTDEQCLETVFSKYGQIQEVVVVKDRETKRSRGFGFVTFENCEDAKDAMAGMNGKTV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|226509825|ref|NP_001150518.1| ELAV-like protein 4 [Zea mays]
gi|195639828|gb|ACG39382.1| ELAV-like protein 4 [Zea mays]
gi|414590519|tpg|DAA41090.1| TPA: ELAV-like protein 4 [Zea mays]
Length = 129
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
TT E L +AFS+FGQV EA +I D+ S+G+G+V ++T +EA +A+ M+GK LD V
Sbjct: 45 TTSEGLKEAFSKFGQVIEARVITDRISGYSRGFGFVKYATVQEAGEAIKGMDGKFLDSWV 104
Query: 65 IFVDNVRPSRRYNTDAPL 82
IF + P +N + L
Sbjct: 105 IFAET--PHNHHNKEHQL 120
>gi|162463657|ref|NP_001105707.1| glycine-rich protein1 [Zea mays]
gi|22293|emb|CAA43431.1| glycine-rich protein [Zea mays]
Length = 155
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 48/68 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L +AFS +G+V E+ II+D+ RS+G+G+VTFSTEE + + MNGK L
Sbjct: 15 LAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEERMRNRIEGMNGKEL 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRNITVN 82
>gi|327301915|ref|XP_003235650.1| glycine-rich RNA-binding protein [Trichophyton rubrum CBS 118892]
gi|326463002|gb|EGD88455.1| glycine-rich RNA-binding protein [Trichophyton rubrum CBS 118892]
Length = 149
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 47/68 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ TT + L + FS+FG + EA ++ D+ NRS+G+G+V FS++ EA AL MN +
Sbjct: 11 LAWHTTDDTLREGFSKFGTIEEAIVVKDRDTNRSRGFGFVRFSSDSEADAALNAMNNQEF 70
Query: 61 DGRVIFVD 68
DGRVI VD
Sbjct: 71 DGRVIRVD 78
>gi|212275199|ref|NP_001130054.1| uncharacterized protein LOC100191146 [Zea mays]
gi|194688180|gb|ACF78174.1| unknown [Zea mays]
gi|414878270|tpg|DAA55401.1| TPA: glycine-rich RNA-binding protein 7 [Zea mays]
Length = 254
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 49/70 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T L D F+++GQV EA II+D+ RS+G+G+VT+++ EEA A+ ++GK L
Sbjct: 37 ISYQTDDHSLRDEFAKYGQVIEARIIIDRESGRSRGFGFVTYTSSEEASAAITALDGKTL 96
Query: 61 DGRVIFVDNV 70
DGR I V++
Sbjct: 97 DGRSIRVNHA 106
>gi|225435044|ref|XP_002284323.1| PREDICTED: cold-inducible RNA-binding protein [Vitis vinifera]
gi|297746123|emb|CBI16179.3| unnamed protein product [Vitis vinifera]
Length = 112
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 48/70 (68%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
TT E L + FS FG VT+A +I D R KG+G+V F +E +A+KAL MNG+++ GR+
Sbjct: 36 TTNEELIEMFSPFGVVTQARLIKDPKTQRPKGFGFVKFESEVDAEKALKAMNGRIVRGRL 95
Query: 65 IFVDNVRPSR 74
IFV+ + +R
Sbjct: 96 IFVEIAKTTR 105
>gi|255580168|ref|XP_002530915.1| RNA binding protein, putative [Ricinus communis]
gi|223529509|gb|EEF31464.1| RNA binding protein, putative [Ricinus communis]
Length = 354
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
TT E L AFS+FG+V +A ++ D+ SKG+G+V + + E+A+K + M+GK LDG V
Sbjct: 63 TTTEGLKQAFSKFGEVVQARVVTDRVSGYSKGFGFVRYGSLEDAEKGIEGMDGKFLDGWV 122
Query: 65 IFVDNVRP 72
IF + RP
Sbjct: 123 IFAEYARP 130
>gi|195621182|gb|ACG32421.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 146
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L +AFS +G+V E+ II+D+ RS+G+G+VTFSTE+ + A+ MNGK L
Sbjct: 15 LAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKEL 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRNITVN 82
>gi|194693774|gb|ACF80971.1| unknown [Zea mays]
Length = 133
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L +AFS +G+V E+ II+D+ RS+G+G+VTFSTE+ + A+ MNGK L
Sbjct: 15 LAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKEL 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRNITVN 82
>gi|223936242|ref|ZP_03628155.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
gi|223895104|gb|EEF61552.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
Length = 103
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 46/72 (63%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T+ + D FS G V E +IMDK R++G+G+VT +T E A+ A+AD+NGK
Sbjct: 10 LSFKATENDIQDLFSAHGPVNEVNLIMDKMTGRARGFGFVTMATAEGAEAAIADLNGKEW 69
Query: 61 DGRVIFVDNVRP 72
GR + V+ RP
Sbjct: 70 QGRALTVNEARP 81
>gi|312283439|dbj|BAJ34585.1| unnamed protein product [Thellungiella halophila]
Length = 259
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 49/72 (68%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ST+ L DAF ++G + EA +++DK RS+G+G++TF ++ +A+A MNG L
Sbjct: 14 LAWSTSDRGLRDAFEKYGHLLEAKVVLDKFSGRSRGFGFITFDEKKAMDEAIAAMNGMDL 73
Query: 61 DGRVIFVDNVRP 72
DGR I VD +P
Sbjct: 74 DGRTITVDKAQP 85
>gi|443895166|dbj|GAC72512.1| hypothetical protein PANT_7d00134 [Pseudozyma antarctica T-34]
Length = 301
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/75 (46%), Positives = 54/75 (72%), Gaps = 2/75 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++TT + LA AFS FGQ+T+ ++ D+ RS+G+G+VTF+T+ EA A+A +N + L
Sbjct: 10 LSWNTTDDSLAHAFSAFGQLTDYIVMKDRETGRSRGFGFVTFATQGEADAAIAALNEQEL 69
Query: 61 DGRVIFVD--NVRPS 73
DGR I V+ N RP+
Sbjct: 70 DGRRIRVNMANSRPA 84
>gi|168034678|ref|XP_001769839.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678948|gb|EDQ65401.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 133
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T + L DAFS FG VTE II+D+ RS+G+G+V F++ EEA+ AL +M+G+ L
Sbjct: 52 LAWATDENTLRDAFSSFGTVTEVKIILDRDTGRSRGFGFVNFTSPEEAEVALQEMDGREL 111
Query: 61 DGRVIFVD 68
GR I VD
Sbjct: 112 AGRQIRVD 119
>gi|20257687|gb|AAM16009.1| glycine-rich RNA binding protein [Zea mays]
gi|20257713|gb|AAM16022.1| glycine-rich RNA binding protein [Zea mays]
Length = 149
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L +AFS +G+V E+ II+D+ RS+G+G+VTFSTE+ + A+ MNGK L
Sbjct: 18 LAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKEL 77
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 78 DGRNITVN 85
>gi|20257715|gb|AAM16023.1| glycine-rich RNA binding protein [Zea mays]
gi|20257721|gb|AAM16026.1| glycine-rich RNA binding protein [Zea mays]
Length = 148
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L +AFS +G+V E+ II+D+ RS+G+G+VTFSTE+ + A+ MNGK L
Sbjct: 18 LAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKEL 77
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 78 DGRNITVN 85
>gi|15229525|ref|NP_189025.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|30687226|ref|NP_850629.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|9294652|dbj|BAB03001.1| glycine-rich RNA binding protein-like [Arabidopsis thaliana]
gi|17979516|gb|AAL50093.1| AT3g23830/F14O13_2 [Arabidopsis thaliana]
gi|20453303|gb|AAM19890.1| AT3g23830/F14O13_2 [Arabidopsis thaliana]
gi|332643298|gb|AEE76819.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|332643299|gb|AEE76820.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
Length = 136
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 48/68 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T L AF+ FG+VTEAT+I D+ RS+G+G+V+FS E+ A A+ +M+GK L
Sbjct: 42 LSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKEMDGKEL 101
Query: 61 DGRVIFVD 68
+GR I V+
Sbjct: 102 NGRQIRVN 109
>gi|20257695|gb|AAM16013.1| glycine-rich RNA binding protein [Zea mays]
Length = 149
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L +AFS +G+V E+ II+D+ RS+G+G+VTFSTE+ + A+ MNGK L
Sbjct: 19 LAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKEL 78
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 79 DGRNITVN 86
>gi|195654321|gb|ACG46628.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|238010482|gb|ACR36276.1| unknown [Zea mays]
Length = 252
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 49/70 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T L D F+++GQV EA II+D+ RS+G+G+VT+++ EEA A+ ++GK L
Sbjct: 37 ISYQTDDHSLRDEFAKYGQVIEARIIIDRESGRSRGFGFVTYTSSEEASAAITALDGKTL 96
Query: 61 DGRVIFVDNV 70
DGR I V++
Sbjct: 97 DGRSIRVNHA 106
>gi|21553972|gb|AAM63053.1| glycine-rich RNA binding protein, putative [Arabidopsis thaliana]
Length = 136
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 48/68 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T L AF+ FG+VTEAT+I D+ RS+G+G+V+FS E+ A A+ +M+GK L
Sbjct: 42 LSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKEMDGKEL 101
Query: 61 DGRVIFVD 68
+GR I V+
Sbjct: 102 NGRQIRVN 109
>gi|59802519|gb|AAX07503.1| unknown [Gemmata sp. Wa1-1]
Length = 122
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T L D F+ +G V A +IMD+ RSKG+G+V T++EAQ A+ M+G+++
Sbjct: 47 LSWGVTDSQLQDMFTPYGSVVSAQVIMDRDTGRSKGFGFVEMGTDQEAQAAITGMHGQVI 106
Query: 61 DGRVIFVDNVRPSR 74
+GR + V+ RP +
Sbjct: 107 EGRPLTVNEARPKK 120
>gi|326474784|gb|EGD98793.1| glycine-rich RNA-binding protein [Trichophyton tonsurans CBS
112818]
Length = 149
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 47/68 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ TT + L + FS+FG + EA ++ D+ NRS+G+G+V FS++ EA AL MN +
Sbjct: 11 LAWHTTDDTLREGFSKFGTIEEAIVVKDRDTNRSRGFGFVRFSSDSEADAALNAMNNQEF 70
Query: 61 DGRVIFVD 68
DGRVI VD
Sbjct: 71 DGRVIRVD 78
>gi|300121030|emb|CBK21412.2| unnamed protein product [Blastocystis hominis]
Length = 296
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 44/67 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++TT EML DAFSQ G++ I+ D+ RS+G G V FST EE A++ MNG L
Sbjct: 106 LSWNTTDEMLRDAFSQCGKIEHYKILTDRQTGRSRGMGIVKFSTREEMNNAISTMNGSTL 165
Query: 61 DGRVIFV 67
DGR I V
Sbjct: 166 DGRQIAV 172
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 12/64 (18%)
Query: 25 IIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV-----------DNVRPS 73
I+ D+ R +G+G+V+FSTE+ KA+ + NG L++GR I V +NVR +
Sbjct: 34 IVYDRNTGRPRGFGFVSFSTEDGLNKAM-EQNGSLINGREIRVEVAKGSLGKNSENVRQN 92
Query: 74 RRYN 77
R YN
Sbjct: 93 RNYN 96
>gi|242083506|ref|XP_002442178.1| hypothetical protein SORBIDRAFT_08g015580 [Sorghum bicolor]
gi|241942871|gb|EES16016.1| hypothetical protein SORBIDRAFT_08g015580 [Sorghum bicolor]
Length = 250
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 49/70 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T L D F+++G+V EA II+D+ RS+G+G+VT+++ EEA A+ M+GK L
Sbjct: 37 LSYGTDDHSLRDEFAKYGEVIEARIILDRESGRSRGFGFVTYTSSEEASAAITAMDGKTL 96
Query: 61 DGRVIFVDNV 70
DGR I V++
Sbjct: 97 DGRSIRVNHA 106
>gi|168034546|ref|XP_001769773.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678882|gb|EDQ65335.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 134
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T + L DAFS FG VTE II+D+ RS+G+G+V F++ EEA+ AL +M+G+ L
Sbjct: 53 LAWATDENTLRDAFSSFGTVTEVKIILDRDTGRSRGFGFVNFTSPEEAEVALQEMDGREL 112
Query: 61 DGRVIFVD 68
GR I VD
Sbjct: 113 AGRQIRVD 120
>gi|20257711|gb|AAM16021.1| glycine-rich RNA binding protein [Zea mays]
Length = 150
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L +AFS +G+V E+ II+D+ RS+G+G+VTFSTE+ + A+ MNGK L
Sbjct: 20 LAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKEL 79
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 80 DGRNITVN 87
>gi|20257689|gb|AAM16010.1| glycine-rich RNA binding protein [Zea mays]
Length = 147
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L +AFS +G+V E+ II+D+ RS+G+G+VTFSTE+ + A+ MNGK L
Sbjct: 17 LAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKEL 76
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 77 DGRNITVN 84
>gi|348553582|ref|XP_003462605.1| PREDICTED: putative RNA-binding protein 3-like [Cavia porcellus]
Length = 159
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 49/75 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++FST ++ L D FS FG ++E ++ D+ RS+G+G++TF+ E A A+ MNG+ L
Sbjct: 13 LNFSTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESL 72
Query: 61 DGRVIFVDNVRPSRR 75
DGR I VD+ S R
Sbjct: 73 DGRQIRVDHAGKSAR 87
>gi|78189511|ref|YP_379849.1| RNA recognition motif-containing protein [Chlorobium
chlorochromatii CaD3]
gi|78171710|gb|ABB28806.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
chlorochromatii CaD3]
Length = 90
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 48/72 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++S T+ L DAF QFGQV A+II DK RSKG+G+V + EA++A+ MN K L
Sbjct: 8 LAYSVTENDLRDAFGQFGQVESASIITDKFSGRSKGFGFVDMPNDSEAREAIGAMNEKEL 67
Query: 61 DGRVIFVDNVRP 72
+GR I V+ +P
Sbjct: 68 NGRPIKVNEAKP 79
>gi|226500552|ref|NP_001148723.1| ELAV-like protein 4 [Zea mays]
gi|195621654|gb|ACG32657.1| ELAV-like protein 4 [Zea mays]
Length = 127
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
TT E L +AFS+FGQV EA +I D+ S+G+G+V ++T +EA +A+ M+GK LDG V
Sbjct: 45 TTSEGLKEAFSKFGQVIEARVITDRISGYSRGFGFVKYATVQEAGEAIEGMDGKFLDGWV 104
Query: 65 IFVDNVR 71
IF + +
Sbjct: 105 IFAEYAK 111
>gi|261351264|gb|ACX71299.1| RNA-binding protein RZ-1 [Capsicum annuum]
Length = 202
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 47/72 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ST+ L DAF +FG + +A +++DK RS+G+G+VTF + + A+ MNG L
Sbjct: 14 LSWSTSDRGLKDAFEKFGNLVDAKVVLDKFSGRSRGFGFVTFDDKRAMEDAIEAMNGMDL 73
Query: 61 DGRVIFVDNVRP 72
DGR I VD +P
Sbjct: 74 DGRAITVDKAQP 85
>gi|196232841|ref|ZP_03131691.1| RNP-1 like RNA-binding protein [Chthoniobacter flavus Ellin428]
gi|196223040|gb|EDY17560.1| RNP-1 like RNA-binding protein [Chthoniobacter flavus Ellin428]
Length = 107
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 50/72 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF TT+ L D F++ G V+EAT++ DK +S+G+G+VT S+ EEAQKA+ +GK +
Sbjct: 10 LSFDTTEMDLQDTFAEAGTVSEATLMQDKFTGKSRGFGFVTMSSSEEAQKAIDLFHGKTV 69
Query: 61 DGRVIFVDNVRP 72
GR + V+ RP
Sbjct: 70 QGRALTVNEARP 81
>gi|20257673|gb|AAM16002.1| glycine-rich RNA binding protein [Zea mays]
Length = 139
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L +AFS +G+V E+ II+D+ RS+G+G+VTFSTE+ + A+ MNGK L
Sbjct: 9 LAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKEL 68
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 69 DGRNITVN 76
>gi|198282085|ref|NP_001105572.1| glycine-rich RNA binding protein [Zea mays]
gi|2668742|gb|AAB88616.1| glycine-rich RNA binding protein [Zea mays]
gi|194692162|gb|ACF80165.1| unknown [Zea mays]
gi|195623052|gb|ACG33356.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 145
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L +AFS +G+V E+ II+D+ RS+G+G+VTFSTE+ + A+ MNGK L
Sbjct: 15 LAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKEL 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRNITVN 82
>gi|195618802|gb|ACG31231.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195625478|gb|ACG34569.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 146
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L +AFS +G+V E+ II+D+ RS+G+G+VTFSTE+ + A+ MNGK L
Sbjct: 15 LAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKEL 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRNITVN 82
>gi|15982739|gb|AAL09710.1| AT3g26420/F20C19_14 [Arabidopsis thaliana]
gi|19699180|gb|AAL90956.1| AT3g26420/F20C19_14 [Arabidopsis thaliana]
Length = 148
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 49/72 (68%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T+ L DAF ++G + EA +++DK RS+G+G++TF ++ +A+A MNG L
Sbjct: 14 LAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMDEAIAAMNGMDL 73
Query: 61 DGRVIFVDNVRP 72
DGR I VD +P
Sbjct: 74 DGRTITVDKAQP 85
>gi|225461185|ref|XP_002283144.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
gi|147854770|emb|CAN78606.1| hypothetical protein VITISV_024164 [Vitis vinifera]
gi|302143178|emb|CBI20473.3| unnamed protein product [Vitis vinifera]
Length = 135
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 12/89 (13%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
TT E L +AFS+FGQV A ++ D+ SKG+G+V + + E+A + + M+GK LDG V
Sbjct: 52 TTSEGLHEAFSKFGQVVNARVVTDRVSGYSKGFGFVRYVSLEDAAEGIKGMDGKFLDGWV 111
Query: 65 IFVDNVRPSRRYNTDAPLARQLPQSPEEN 93
IF + RP + P SP+ N
Sbjct: 112 IFAEYARP------------RPPPSPQNN 128
>gi|381206512|ref|ZP_09913583.1| RNA-binding protein [SAR324 cluster bacterium JCVI-SC AAA005]
Length = 85
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++FS +++ L AFSQFG+V++A++IMD+ NRSKG+G+V E A+ +NG +
Sbjct: 8 LAFSVSEDQLRSAFSQFGKVSKASVIMDRVNNRSKGFGFVEMDDAAEGNSAVEALNGHQI 67
Query: 61 DGRVIFVDNVRP 72
DGR V+ +P
Sbjct: 68 DGRAWKVNEAKP 79
>gi|223938031|ref|ZP_03629929.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
gi|223893245|gb|EEF59708.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
Length = 114
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 47/72 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T+ + D F+Q G VTE +IMDK R++G+G+VT ST+E A A+ ++NGK
Sbjct: 9 LSFDATENDVQDLFAQHGPVTEVNLIMDKMTGRARGFGFVTMSTKEGADAAVQNLNGKQW 68
Query: 61 DGRVIFVDNVRP 72
GR + V+ RP
Sbjct: 69 QGRALTVNEARP 80
>gi|116780918|gb|ABK21879.1| unknown [Picea sitchensis]
Length = 172
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 48/68 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L DAFS FG++ E+ II D+ RS+G+G+VTFS E+ + A+ MNGK+L
Sbjct: 16 LAWATDDRSLQDAFSPFGEILESKIISDRETGRSRGFGFVTFSDEQSMRDAIDAMNGKVL 75
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 76 DGRNITVN 83
>gi|20257675|gb|AAM16003.1| glycine-rich RNA binding protein [Zea mays]
Length = 156
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L +AFS +G+V E+ II+D+ RS+G+G+VTFSTE+ + A+ MNGK L
Sbjct: 25 LAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKEL 84
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 85 DGRNITVN 92
>gi|20257669|gb|AAM16000.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L +AFS +G+V E+ II+D+ RS+G+G+VTFSTE+ + A+ MNGK L
Sbjct: 25 LAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKEL 84
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 85 DGRNITVN 92
>gi|10799202|gb|AAG23220.1| glycine-rich RNA-binding protein [Sorghum bicolor]
Length = 170
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 48/68 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T E L AF+ FGQV ++ +I D+ RS+G+G+VTFS+E+ A+ +MNGK L
Sbjct: 15 LAWATNNETLEHAFANFGQVLDSKVITDRETGRSRGFGFVTFSSEQSMLDAIENMNGKEL 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRNITVN 82
>gi|121596409|ref|YP_988305.1| RNP-1 like RNA-binding protein [Acidovorax sp. JS42]
gi|120608489|gb|ABM44229.1| RNP-1 like RNA-binding protein [Acidovorax sp. JS42]
Length = 149
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 46/70 (65%)
Query: 3 FSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDG 62
+S + L AFSQFG VT A ++M++ RSKG+G+V ++ EAQ+A+ MNG+ L G
Sbjct: 12 YSVRDQDLEQAFSQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQEAINGMNGQSLGG 71
Query: 63 RVIFVDNVRP 72
R I V+ RP
Sbjct: 72 RSIVVNEARP 81
>gi|544423|sp|Q99070.1|GRP2_SORBI RecName: Full=Glycine-rich RNA-binding protein 2
gi|21625|emb|CAA40862.1| glycine-rich RNA-binding protein [Sorghum bicolor]
Length = 168
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 48/68 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T E L AF+ FGQV ++ +I D+ RS+G+G+VTFS+E+ A+ +MNGK L
Sbjct: 15 LAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIENMNGKEL 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRNITVN 82
>gi|171056877|ref|YP_001789226.1| RNP-1 like RNA-binding protein [Leptothrix cholodnii SP-6]
gi|170774322|gb|ACB32461.1| RNP-1 like RNA-binding protein [Leptothrix cholodnii SP-6]
Length = 157
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 47/72 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++S E L +AFSQFG V A ++MD+ RSKG+G+V ++ EAQ A+ +NG+ +
Sbjct: 10 LAYSVRDEDLNEAFSQFGAVNSAKVMMDRETGRSKGFGFVEMGSDPEAQAAINGLNGQAI 69
Query: 61 DGRVIFVDNVRP 72
GR I V+ RP
Sbjct: 70 GGRAIVVNEARP 81
>gi|20257691|gb|AAM16011.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L +AFS +G+V E+ II+D+ RS+G+G+VTFSTE+ + A+ MNGK L
Sbjct: 24 LAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKEL 83
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 84 DGRNITVN 91
>gi|20257667|gb|AAM15999.1| glycine-rich RNA binding protein [Zea mays]
gi|20257671|gb|AAM16001.1| glycine-rich RNA binding protein [Zea mays]
gi|20257677|gb|AAM16004.1| glycine-rich RNA binding protein [Zea mays]
gi|20257685|gb|AAM16008.1| glycine-rich RNA binding protein [Zea mays]
gi|20257703|gb|AAM16017.1| glycine-rich RNA binding protein [Zea mays]
gi|20257717|gb|AAM16024.1| glycine-rich RNA binding protein [Zea mays]
gi|20257719|gb|AAM16025.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L +AFS +G+V E+ II+D+ RS+G+G+VTFSTE+ + A+ MNGK L
Sbjct: 24 LAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKEL 83
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 84 DGRNITVN 91
>gi|20257683|gb|AAM16007.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L +AFS +G+V E+ II+D+ RS+G+G+VTFSTE+ + A+ MNGK L
Sbjct: 24 LAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKEL 83
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 84 DGRNITVN 91
>gi|125548231|gb|EAY94053.1| hypothetical protein OsI_15830 [Oryza sativa Indica Group]
Length = 113
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 42/53 (79%)
Query: 6 TKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGK 58
T++ LA+AFSQ+GQV EATI+ DK NR KG+G+V F++EE A KA +MNGK
Sbjct: 49 TEDSLAEAFSQYGQVLEATIVTDKMTNRPKGFGFVKFASEEAANKAKEEMNGK 101
>gi|449438165|ref|XP_004136860.1| PREDICTED: uncharacterized protein LOC101215898 [Cucumis sativus]
gi|449478936|ref|XP_004155458.1| PREDICTED: uncharacterized protein LOC101227324 [Cucumis sativus]
Length = 211
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 4/85 (4%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ST+ L +AF +FG + EA +++DK RS+G+G+VTF ++ +A+ MNG L
Sbjct: 14 LSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDL 73
Query: 61 DGRVIFVDNVRPS----RRYNTDAP 81
DGR I VD +P+ R ++ D P
Sbjct: 74 DGRSITVDKAQPNQGSGRDHDGDRP 98
>gi|406944721|gb|EKD76419.1| hypothetical protein ACD_43C00118G0001 [uncultured bacterium]
Length = 84
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 47/75 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F +T + L +AF Q G V A IIMDK RS+G+G+V ST EEAQ A+ +GK L
Sbjct: 10 IAFKSTDDTLREAFMQAGNVVSAKIIMDKMTGRSRGFGFVEMSTPEEAQAAIQMWDGKEL 69
Query: 61 DGRVIFVDNVRPSRR 75
DGR I V +P +
Sbjct: 70 DGRRIAVKEAQPREK 84
>gi|90265701|dbj|BAE91897.1| glycine-rich RNA-binding protein [Lolium perenne]
Length = 107
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 48/68 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T + L AFSQFG++T+ II D+ RS+G+G+VTFS+ E + A+ MNG+ L
Sbjct: 12 LAWATNDQSLEQAFSQFGEITDCKIINDRETGRSRGFGFVTFSSSESMKNAIEGMNGQDL 71
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 72 DGRNITVN 79
>gi|357144334|ref|XP_003573255.1| PREDICTED: uncharacterized protein LOC100824407 [Brachypodium
distachyon]
Length = 226
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 50/72 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+STT L DAF +FG+VTE +++DK RS+G+G+VTF ++ ++A+ MNG L
Sbjct: 14 LSWSTTDVDLKDAFGKFGRVTETKVVLDKYSGRSRGFGFVTFDDKKAMEEAVEAMNGIDL 73
Query: 61 DGRVIFVDNVRP 72
DGR I V+ +P
Sbjct: 74 DGRNITVERAQP 85
>gi|124268989|ref|YP_001022993.1| RNA-binding region RNP-1 [Methylibium petroleiphilum PM1]
gi|124261764|gb|ABM96758.1| RNA-binding region RNP-1 [Methylibium petroleiphilum PM1]
Length = 162
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++S + L AF +FG VT A ++MD+ RSKG+G+V ++ EAQ A+ MNG+ L
Sbjct: 10 LAYSVRDDDLQQAFGEFGAVTSAKVMMDRDTGRSKGFGFVEMGSDAEAQAAIEGMNGQSL 69
Query: 61 DGRVIFVDNVRP 72
GR I V+ RP
Sbjct: 70 SGRAIVVNEARP 81
>gi|145233965|ref|XP_001400355.1| glycine-rich RNA-binding protein 2 [Aspergillus niger CBS 513.88]
gi|134057294|emb|CAK37908.1| unnamed protein product [Aspergillus niger]
gi|350635078|gb|EHA23440.1| hypothetical protein ASPNIDRAFT_197860 [Aspergillus niger ATCC
1015]
Length = 116
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 48/74 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ TT E L + FSQ+G + EA ++ D +RS+G+G+V F+++ EA A+ MN +
Sbjct: 9 LAWHTTDETLREGFSQYGTIEEAIVVKDHDTHRSRGFGFVRFASDVEADAAMNAMNNQEF 68
Query: 61 DGRVIFVDNVRPSR 74
DGRVI VD SR
Sbjct: 69 DGRVIRVDKASESR 82
>gi|343432668|ref|NP_001230348.1| RNA binding motif (RNP1, RRM) protein 3 [Sus scrofa]
Length = 156
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F+T ++ L D FS FG ++E ++ D+ RS+G+G++TF+ E A A+ MNG+ L
Sbjct: 13 LNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASNAMRAMNGESL 72
Query: 61 DGRVIFVDNVRPSRR 75
DGR I VD+ S R
Sbjct: 73 DGRQIRVDHAGKSAR 87
>gi|351725255|ref|NP_001236574.1| uncharacterized protein LOC100527220 [Glycine max]
gi|255631812|gb|ACU16273.1| unknown [Glycine max]
Length = 138
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ + L DAFS FG V +A +I D+ RS+G+G+V FS +E A AL+ M+GK L
Sbjct: 43 LSYGVDDQSLKDAFSGFGDVVDAKVITDRDSGRSRGFGFVNFSNDESASSALSAMDGKDL 102
Query: 61 DGRVIFVD--NVRP 72
DGR I V N RP
Sbjct: 103 DGRSIRVSYANDRP 116
>gi|256423338|ref|YP_003123991.1| RNP-1 like RNA-binding protein [Chitinophaga pinensis DSM 2588]
gi|256038246|gb|ACU61790.1| RNP-1 like RNA-binding protein [Chitinophaga pinensis DSM 2588]
Length = 92
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Query: 6 TKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVI 65
E L + FS++G V+ A +I+DK NRS+G+G+VT + EA+KA+ +MNG L+DG+ I
Sbjct: 13 VNEDLNNHFSRYGVVSSANVIIDKFTNRSRGFGFVTMPNDTEAEKAIQEMNGSLIDGKTI 72
Query: 66 FVDNVR-----PSRRYN 77
R P R YN
Sbjct: 73 AASQARPREEKPGRSYN 89
>gi|15822703|gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum]
Length = 277
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 49/75 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T + L +AFSQ+G V EA +IMD+ RS+G+G+++F + EEA AL M+G+ L
Sbjct: 47 LSYGTDESSLKEAFSQYGDVIEARVIMDRDTGRSRGFGFISFPSSEEAASALQAMDGQDL 106
Query: 61 DGRVIFVDNVRPSRR 75
GR I V+ RR
Sbjct: 107 HGRRIRVNYATEKRR 121
>gi|222112647|ref|YP_002554911.1| rnp-1 like RNA-binding protein [Acidovorax ebreus TPSY]
gi|221732091|gb|ACM34911.1| RNP-1 like RNA-binding protein [Acidovorax ebreus TPSY]
Length = 155
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 47/72 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ +S + L AFSQFG VT A ++M++ RSKG+G+V ++ EAQ+A+ MNG+ L
Sbjct: 10 LPYSVRDQDLEQAFSQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQEAINGMNGQSL 69
Query: 61 DGRVIFVDNVRP 72
GR I V+ RP
Sbjct: 70 GGRSIVVNEARP 81
>gi|255633638|gb|ACU17178.1| unknown [Glycine max]
Length = 196
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 54/74 (72%), Gaps = 2/74 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
VS+ST ++ L +AFS++G+V +A IIMD+ RS+G+G++T+++ EEA A+ ++G+ L
Sbjct: 49 VSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAIQALDGQDL 108
Query: 61 DGRVIFVD--NVRP 72
GR I V+ N RP
Sbjct: 109 HGRPIRVNYANERP 122
>gi|195626882|gb|ACG35271.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 203
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L +AFS +G+V E+ II+D+ RS+G+G+VTFSTE+ + A+ MNGK L
Sbjct: 72 LAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKEL 131
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 132 DGRNITVN 139
>gi|115448473|ref|NP_001048016.1| Os02g0730800 [Oryza sativa Japonica Group]
gi|46390469|dbj|BAD15930.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|46390865|dbj|BAD16369.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|113537547|dbj|BAF09930.1| Os02g0730800 [Oryza sativa Japonica Group]
gi|218191513|gb|EEC73940.1| hypothetical protein OsI_08808 [Oryza sativa Indica Group]
Length = 399
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 48/75 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T+++ L AF FG++ E IIMDK RSKGY ++ ++TEE AL MNG+++
Sbjct: 302 LSFYTSEKTLRAAFEPFGELVEVKIIMDKISKRSKGYAFIEYTTEEAGGAALKAMNGQII 361
Query: 61 DGRVIFVDNVRPSRR 75
+G +I VD + R
Sbjct: 362 NGWMIVVDVAKHRSR 376
>gi|409044525|gb|EKM54006.1| hypothetical protein PHACADRAFT_257571 [Phanerochaete carnosa
HHB-10118-sp]
Length = 155
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++TT + L AFSQFGQ+ ++ ++ D+ RS+G+G+VTFS+ EAQ A+ +N + L
Sbjct: 10 LSWNTTDDSLRTAFSQFGQILDSIVMRDRDTGRSRGFGFVTFSSANEAQTAITSLNEQEL 69
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 70 DGRRIRVN 77
>gi|544421|sp|Q99069.1|GRP1_SORBI RecName: Full=Glycine-rich RNA-binding protein 1
gi|21623|emb|CAA40863.1| glycine-rich RNA-binding protein [Sorghum bicolor]
Length = 142
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFVD 68
L AFS +G+V E+ II+D+ RS+G+G+VTFSTEE + A+ MNGK LDGR I V+
Sbjct: 3 LHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNITVN 61
>gi|6911144|gb|AAF31403.1|AF200322_1 putative glycine-rich RNA binding protein 3 [Catharanthus roseus]
Length = 164
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 51/72 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++TT + L++AFSQ+G++ E+ II D+ RS+G+G+VTF E+ + A+ MNG+ L
Sbjct: 15 LAWATTDQSLSEAFSQYGEILESKIINDRETGRSRGFGFVTFKDEQSMRDAIEGMNGQTL 74
Query: 61 DGRVIFVDNVRP 72
DGR I V+ +
Sbjct: 75 DGRNITVNEAQS 86
>gi|388512901|gb|AFK44512.1| unknown [Medicago truncatula]
Length = 144
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
TT E L +AF +FG+V A ++ D+ SKG+G+V ++T E+A K + M+GK L+G V
Sbjct: 62 TTTETLREAFQKFGEVVHARVVTDRVSGYSKGFGFVKYATLEDAAKGIEGMDGKFLEGWV 121
Query: 65 IFVDNVRP 72
IF + RP
Sbjct: 122 IFAEYARP 129
>gi|332525684|ref|ZP_08401833.1| RNA-binding region RNP-1 [Rubrivivax benzoatilyticus JA2]
gi|332109243|gb|EGJ10166.1| RNA-binding region RNP-1 [Rubrivivax benzoatilyticus JA2]
Length = 145
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 43/63 (68%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFVDN 69
L AF+QFG VT A ++MD+ RSKG+G+V ++ EAQ A+ MNG+ L+GR + V+
Sbjct: 6 LQQAFAQFGTVTSAKVMMDRETGRSKGFGFVEMGSDAEAQAAINGMNGQSLEGRAVVVNE 65
Query: 70 VRP 72
RP
Sbjct: 66 ARP 68
>gi|222623613|gb|EEE57745.1| hypothetical protein OsJ_08262 [Oryza sativa Japonica Group]
Length = 369
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 48/75 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T+++ L AF FG++ E IIMDK RSKGY ++ ++TEE AL MNG+++
Sbjct: 272 LSFYTSEKTLRAAFEPFGELVEVKIIMDKISKRSKGYAFIEYTTEEAGGAALKAMNGQII 331
Query: 61 DGRVIFVDNVRPSRR 75
+G +I VD + R
Sbjct: 332 NGWMIVVDVAKHRSR 346
>gi|15231557|ref|NP_189273.1| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
gi|15983477|gb|AAL11606.1|AF424613_1 AT3g26420/F20C19_14 [Arabidopsis thaliana]
gi|9294301|dbj|BAB02203.1| unnamed protein product [Arabidopsis thaliana]
gi|15451066|gb|AAK96804.1| Unknown protein [Arabidopsis thaliana]
gi|18377412|gb|AAL66872.1| unknown protein [Arabidopsis thaliana]
gi|62320797|dbj|BAD93728.1| RNA-binding protein [Arabidopsis thaliana]
gi|110742443|dbj|BAE99140.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332643635|gb|AEE77156.1| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
Length = 245
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 49/72 (68%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T+ L DAF ++G + EA +++DK RS+G+G++TF ++ +A+A MNG L
Sbjct: 14 LAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMDEAIAAMNGMDL 73
Query: 61 DGRVIFVDNVRP 72
DGR I VD +P
Sbjct: 74 DGRTITVDKAQP 85
>gi|366987527|ref|XP_003673530.1| hypothetical protein NCAS_0A05890 [Naumovozyma castellii CBS 4309]
gi|342299393|emb|CCC67147.1| hypothetical protein NCAS_0A05890 [Naumovozyma castellii CBS 4309]
Length = 415
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+S E L F G V A +IM++G +RS+GYGYV F + A+KA+ +M GK +
Sbjct: 169 LSWSIDDEWLKKEFEHIGGVVSARVIMERGTDRSRGYGYVDFEDKSYAEKAIKEMQGKEI 228
Query: 61 DGRVIFVD--NVRPSRRYNTDAPLARQLPQSPEE 92
DGR I VD +P+ N A +P P E
Sbjct: 229 DGREINVDMSTSKPAAGNNDRAKKFGDVPSEPSE 262
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 43/72 (59%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF+ ++ +++ FS++G++ I + KG+GYV ++ E+A+KAL + G+ +
Sbjct: 269 LSFNADRDAISELFSKYGEIISVRIPTHPETEQPKGFGYVQYTNVEDAKKALEGLQGEYI 328
Query: 61 DGRVIFVDNVRP 72
D R + +D P
Sbjct: 329 DNRPVRLDYSTP 340
>gi|388858327|emb|CCF48115.1| related to glycine-rich RNA-binding protein [Ustilago hordei]
Length = 193
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 54/75 (72%), Gaps = 2/75 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++TT + LA AFS +GQ+T+ ++ D+ RS+G+G+VTF+T+ EA A+A +N + L
Sbjct: 10 LSWNTTDDSLAHAFSAYGQLTDYIVMKDRETGRSRGFGFVTFATQGEADAAIAALNEQEL 69
Query: 61 DGRVIFVD--NVRPS 73
DGR I V+ N RP+
Sbjct: 70 DGRRIRVNMANSRPA 84
>gi|449550007|gb|EMD40972.1| hypothetical protein CERSUDRAFT_111545 [Ceriporiopsis subvermispora
B]
Length = 286
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 48/68 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S TT+ L D FS+FG+V + TI+ D+ +RS+G+G++T ST EEA + + ++NG L
Sbjct: 86 LSIRTTERDLDDEFSRFGRVDKVTIVYDQRSDRSRGFGFITMSTTEEAGRCIKELNGVEL 145
Query: 61 DGRVIFVD 68
+GR I VD
Sbjct: 146 NGRRIRVD 153
>gi|353235522|emb|CCA67534.1| related to glycine-rich RNA-binding protein [Piriformospora
indica DSM 11827]
Length = 236
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++TT + L +AF Q+G V ++ ++ D+ RS+G+G+VT+S+EEEA A++ +N L
Sbjct: 10 LSWNTTDDTLREAFRQYGNVVDSIVMRDRETGRSRGFGFVTYSSEEEASNAISGLNETSL 69
Query: 61 DGRVIFVD--NVRP 72
DGR I V+ N RP
Sbjct: 70 DGRQIKVNLANARP 83
>gi|185133178|ref|NP_001117016.1| hyperosmotic glycine rich protein [Salmo salar]
gi|28173040|gb|AAO32675.1| hyperosmotic glycine rich protein [Salmo salar]
Length = 205
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF TT++ LA+AFS++G +++ +IMD+ R +G+G+V + E+A+ A+ MNG+ L
Sbjct: 12 LSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDAMNGQSL 71
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 72 DGRTIRVN 79
>gi|387913830|gb|AFK10524.1| cold inducible RNA binding protein isoform 3 [Callorhinchus
milii]
gi|392873312|gb|AFM85488.1| cold inducible RNA binding protein isoform 3 [Callorhinchus
milii]
gi|392873324|gb|AFM85494.1| cold inducible RNA binding protein isoform 3 [Callorhinchus
milii]
gi|392873420|gb|AFM85542.1| cold inducible RNA binding protein isoform 3 [Callorhinchus
milii]
gi|392873526|gb|AFM85595.1| cold inducible RNA binding protein isoform 3 [Callorhinchus
milii]
gi|392873598|gb|AFM85631.1| cold inducible RNA binding protein isoform 3 [Callorhinchus
milii]
gi|392877296|gb|AFM87480.1| cold inducible RNA binding protein isoform 3 [Callorhinchus
milii]
Length = 136
Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F+T ++ L + FS++GQV+E II D+ S+G+G+VTF + ++AQ AL MNG+ L
Sbjct: 12 LNFNTEEQSLEEVFSEYGQVSEVRIIRDRDTGTSRGFGFVTFESPDDAQDALTSMNGRSL 71
Query: 61 DGRVIFVD 68
+GR I VD
Sbjct: 72 EGRQIRVD 79
>gi|387861093|gb|AFK08576.1| glycine-rich RNA binding protein 2a [Camelina sativa]
gi|387861099|gb|AFK08579.1| glycine-rich RNA binding protein 2a [Camelina sativa]
Length = 160
Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T + L DAF+ FG+V +A +I+D+ RS+G+G+V FS E A A+++M+GK L
Sbjct: 43 LSWGTDDQSLRDAFAHFGEVVDAKVIVDRETGRSRGFGFVNFSDETAASAAISEMDGKDL 102
Query: 61 DGRVIFVD--NVRPS 73
+GR I V+ N RPS
Sbjct: 103 NGRNIRVNQANDRPS 117
>gi|6911146|gb|AAF31404.1|AF200323_1 putative glycine-rich RNA-binding protein 2 [Catharanthus roseus]
Length = 160
Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 50/68 (73%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++TT + L++AFSQ+G+V E+ +I D+ RS+G+G+VTF E+ + A+ MNG+ L
Sbjct: 15 LAWATTDQSLSEAFSQYGEVLESKVINDRETGRSRGFGFVTFGDEKSMKDAIVGMNGQTL 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRNITVN 82
>gi|417396333|gb|JAA45200.1| Putative mrna cleavage and polyadenylation factor i complex
subunit rna15 [Desmodus rotundus]
Length = 158
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F+T ++ L D FS FG ++E ++ D+ RS+G+G++TF+ E A A+ MNG+ L
Sbjct: 13 LNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESL 72
Query: 61 DGRVIFVDNVRPSRR 75
DGR I VD+ S R
Sbjct: 73 DGRQIRVDHAGKSAR 87
>gi|302810024|ref|XP_002986704.1| hypothetical protein SELMODRAFT_182522 [Selaginella moellendorffii]
gi|300145592|gb|EFJ12267.1| hypothetical protein SELMODRAFT_182522 [Selaginella moellendorffii]
Length = 730
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 47/67 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T++E LA F Q+G+V + +I DK NRSKGYGYV F+ EEA +A+ +++ +
Sbjct: 232 LAYTTSEEELASLFGQYGEVVQVHLICDKETNRSKGYGYVGFTLPEEATRAMTELDNSIF 291
Query: 61 DGRVIFV 67
GR++ V
Sbjct: 292 QGRLLHV 298
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
V+F T++ L FS FGQV + + K +G+ +V F T++EAQ A + L
Sbjct: 633 VAFEATRKDLKQLFSPFGQVKKVKL-PKKFDGNHRGFAFVEFVTKQEAQNAFEALGSSHL 691
Query: 61 DGRVIFVDNVR 71
GR + ++ R
Sbjct: 692 YGRHLVLEWAR 702
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 10/95 (10%)
Query: 6 TKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLD---- 61
T + L + F GQVT+A ++ + +S+ +G+V F ++EEA+ A+A N LD
Sbjct: 17 TDDKLREHFGAKGQVTDAKVMRTR-DGKSRRFGFVGFYSQEEAESAVAYFNRSFLDTSRL 75
Query: 62 ----GRVIFVDNVRPSRRYNTDAPLARQLPQSPEE 92
R + VRP R++ + A + +PEE
Sbjct: 76 VCEVARSVGDAAVRPWSRHSKGSS-AYEKTHAPEE 109
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 1 VSFSTTKEMLADAFS---QFGQVTEATIIMD---KGKNRSKGYGYVTFSTEEEAQKALAD 54
++F TT L F + G + AT+ G + S G+G+V F + + A++ +
Sbjct: 533 LNFKTTDASLRKHFEGRVKAGSLRTATVKRKPSKTGASLSMGFGFVEFDSADTAERVCKE 592
Query: 55 MNGKLLDGRVIFVDNVRPSRRYNTDAP 81
M G +LDG + ++PSR + + P
Sbjct: 593 MQGSVLDGHALV---LQPSRAGDDEKP 616
>gi|149744489|ref|XP_001493789.1| PREDICTED: putative RNA-binding protein 3-like isoform 1 [Equus
caballus]
Length = 156
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F+T ++ L D FS FG ++E ++ D+ RS+G+G++TF+ E A A+ MNG+ L
Sbjct: 13 LNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESL 72
Query: 61 DGRVIFVDNVRPSRR 75
DGR I VD+ S R
Sbjct: 73 DGRQIRVDHAGKSAR 87
>gi|1395193|dbj|BAA12064.1| RNA-binding protein RZ-1 [Nicotiana sylvestris]
gi|1435062|dbj|BAA06012.1| RNA binding protein RZ-1 [Nicotiana sylvestris]
Length = 209
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 48/74 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ST+ L DAF +FG + +A +++DK RS+G+G+VTF + + A+ MNG L
Sbjct: 13 LSWSTSDRGLKDAFEKFGNLVDAKVVLDKFSGRSRGFGFVTFDEKRAMEDAIEAMNGVDL 72
Query: 61 DGRVIFVDNVRPSR 74
DGR I VD +P +
Sbjct: 73 DGRDITVDKAQPDK 86
>gi|410988519|ref|XP_004000531.1| PREDICTED: putative RNA-binding protein 3 [Felis catus]
Length = 160
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F+T ++ L D FS FG ++E ++ D+ RS+G+G++TF+ E A A+ MNG+ L
Sbjct: 13 LNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESL 72
Query: 61 DGRVIFVDNVRPSRR 75
DGR I VD+ S R
Sbjct: 73 DGRQIRVDHAGKSAR 87
>gi|338729124|ref|XP_003365829.1| PREDICTED: putative RNA-binding protein 3-like isoform 2 [Equus
caballus]
Length = 135
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F+T ++ L D FS FG ++E ++ D+ RS+G+G++TF+ E A A+ MNG+ L
Sbjct: 13 LNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESL 72
Query: 61 DGRVIFVDNVRPSRR 75
DGR I VD+ S R
Sbjct: 73 DGRQIRVDHAGKSAR 87
>gi|392882418|gb|AFM90041.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
gi|392884370|gb|AFM91017.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
Length = 178
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 50/73 (68%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F T ++ L + F+++G V+E +I ++ RSKG+G+VTF ++A+ ALA MNGK +
Sbjct: 12 INFETDEQTLEEVFAKYGDVSEVIVIRERDTQRSKGFGFVTFENPDDARDALAGMNGKTV 71
Query: 61 DGRVIFVDNVRPS 73
DGR I VD+ S
Sbjct: 72 DGRQIRVDHAGKS 84
>gi|358367775|dbj|GAA84393.1| glycine-rich RNA-binding protein [Aspergillus kawachii IFO 4308]
Length = 117
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ TT + L + FSQ+G + EA ++ D +RS+G+G+V F+++ EA A+ MN +
Sbjct: 9 LAWHTTDDTLREGFSQYGTIEEAIVVKDHDTHRSRGFGFVRFASDAEADAAMNAMNNQEF 68
Query: 61 DGRVIFVDNVRPSR 74
DGRVI VD SR
Sbjct: 69 DGRVIRVDKASESR 82
>gi|168704267|ref|ZP_02736544.1| RNA-binding region RNP-1 [Gemmata obscuriglobus UQM 2246]
Length = 137
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 49/72 (68%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T ML + F+ +G V A +IMD+ RSKG+G+V +++EAQ A++ M+G+++
Sbjct: 10 LSWGVTDAMLQEMFTPYGAVVSAQVIMDRDTGRSKGFGFVEMGSDQEAQAAISGMHGQVI 69
Query: 61 DGRVIFVDNVRP 72
+GR + V+ RP
Sbjct: 70 EGRPLTVNEARP 81
>gi|392592716|gb|EIW82042.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 589
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++ + LA F++ G+V AT+ MD+ RS+G+GYV FST E +KA+ ++NGK +
Sbjct: 340 LSWNVDNDWLAKEFAECGEVVSATVQMDRSTGRSRGFGYVHFSTSEAVEKAI-ELNGKEI 398
Query: 61 DGRVIFVDNVRPSRR 75
DGR + VD P +
Sbjct: 399 DGRAVNVDKSNPPNK 413
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 42/72 (58%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF + L +AFS+ G+V + D+ R KG+GYV FS E A+KA A M G L
Sbjct: 440 LSFGMNDDALWEAFSEHGEVKNVRLPTDRESGRPKGFGYVEFSDVETAKKAHAAMQGVEL 499
Query: 61 DGRVIFVDNVRP 72
DGR + +D +P
Sbjct: 500 DGRSVRLDFSQP 511
>gi|343459003|gb|AEM37660.1| cold inducible RNA binding protein [Epinephelus bruneus]
Length = 176
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 47/77 (61%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T +E LA AF ++G + + +I DK RS+G+G+V + ++A+ AL MNGK L
Sbjct: 12 LSFETNEESLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNSDDAKDALEGMNGKTL 71
Query: 61 DGRVIFVDNVRPSRRYN 77
DGR I VD R N
Sbjct: 72 DGRAIRVDEAGKGGRSN 88
>gi|350538645|ref|NP_001233728.1| RNA-binding motif 3 [Cricetulus griseus]
gi|189170130|gb|ACD80090.1| RNA-binding motif 3 [Cricetulus griseus]
Length = 156
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F+T ++ L D FS FG ++E ++ D+ RS+G+G++TF+ E A A+ MNG+ L
Sbjct: 13 LNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESL 72
Query: 61 DGRVIFVDNVRPSRR 75
DGR I VD+ S R
Sbjct: 73 DGRQIRVDHAGKSAR 87
>gi|164659141|ref|XP_001730695.1| hypothetical protein MGL_2149 [Malassezia globosa CBS 7966]
gi|159104592|gb|EDP43481.1| hypothetical protein MGL_2149 [Malassezia globosa CBS 7966]
Length = 190
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+STT + LA AFS +GQ+T+ ++ D+ RS+G+G+VTF T++EA A+ +N + L
Sbjct: 9 LSWSTTDDGLAQAFSPYGQLTDYIVMKDRDSGRSRGFGFVTFMTQQEADAAIMALNEQEL 68
Query: 61 DGRVIFVD--NVRP 72
DGR I V+ N RP
Sbjct: 69 DGRRIRVNMANSRP 82
>gi|12659074|gb|AAK01176.1| RNA-binding protein [Triticum aestivum]
Length = 183
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 50/72 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++TT L DAF +FG+VTE +++DK RS+G+G+VTF ++ ++A+ MNG L
Sbjct: 14 LSWNTTDVDLKDAFGKFGRVTETKVVLDKFSGRSRGFGFVTFDDKKAMEEAVEAMNGIDL 73
Query: 61 DGRVIFVDNVRP 72
DGR I V+ +P
Sbjct: 74 DGRNITVERAQP 85
>gi|224059524|ref|XP_002299889.1| predicted protein [Populus trichocarpa]
gi|222847147|gb|EEE84694.1| predicted protein [Populus trichocarpa]
Length = 88
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 48/71 (67%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
TT L FS FG V+EA ++++ R KG+G+VTF +E +A KAL MNG++++GR+
Sbjct: 18 TTNHELKRLFSPFGAVSEARLVVESKTLRPKGFGFVTFESEADAHKALKAMNGRIVNGRL 77
Query: 65 IFVDNVRPSRR 75
IFV+ + + R
Sbjct: 78 IFVEVAKDTER 88
>gi|189339246|ref|NP_446148.1| putative RNA-binding protein 3 [Rattus norvegicus]
gi|149028410|gb|EDL83795.1| RNA binding motif protein 3, isoform CRA_a [Rattus norvegicus]
gi|149028411|gb|EDL83796.1| RNA binding motif protein 3, isoform CRA_a [Rattus norvegicus]
Length = 156
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F+T ++ L D FS FG ++E ++ D+ RS+G+G++TF+ E A A+ MNG+ L
Sbjct: 13 LNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESL 72
Query: 61 DGRVIFVDNVRPSRR 75
DGR I VD+ S R
Sbjct: 73 DGRQIRVDHAGKSAR 87
>gi|410924411|ref|XP_003975675.1| PREDICTED: cold-inducible RNA-binding protein-like [Takifugu
rubripes]
Length = 170
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 50/76 (65%), Gaps = 4/76 (5%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T +E LA+AF ++G + + +I DK RS+G+G+V + + E+A+ A+ MNGK L
Sbjct: 12 LSFETNEESLAEAFGKYGTIEKVDVIRDKETGRSRGFGFVKYESVEDAKDAMTAMNGKSL 71
Query: 61 DGRVIFVD----NVRP 72
DGR I VD +RP
Sbjct: 72 DGRAIRVDEAGKGLRP 87
>gi|148702008|gb|EDL33955.1| mCG116386, isoform CRA_e [Mus musculus]
Length = 179
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 47/70 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F+T ++ L D FS FG ++E ++ D+ RS+G+G++TF+ E A A+ MNG+ L
Sbjct: 38 LNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESL 97
Query: 61 DGRVIFVDNV 70
DGR I VD+
Sbjct: 98 DGRQIRVDHA 107
>gi|417396785|gb|JAA45426.1| Putative mrna cleavage and polyadenylation factor i complex
subunit rna15 [Desmodus rotundus]
Length = 190
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F+T ++ L D FS FG ++E ++ D+ RS+G+G++TF+ E A A+ MNG+ L
Sbjct: 13 LNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESL 72
Query: 61 DGRVIFVDNVRPSRR 75
DGR I VD+ S R
Sbjct: 73 DGRQIRVDHAGKSAR 87
>gi|444518692|gb|ELV12325.1| Putative RNA-binding protein 3 [Tupaia chinensis]
Length = 154
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F+T ++ L D FS FG ++E ++ D+ RS+G+G++TF+ E A A+ MNG+ L
Sbjct: 13 LNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESL 72
Query: 61 DGRVIFVDNVRPSRR 75
DGR I VD+ S R
Sbjct: 73 DGRQIRVDHAGKSAR 87
>gi|226496497|ref|NP_001150207.1| LOC100283837 [Zea mays]
gi|195621336|gb|ACG32498.1| nucleolin [Zea mays]
gi|195637560|gb|ACG38248.1| nucleolin [Zea mays]
gi|223948323|gb|ACN28245.1| unknown [Zea mays]
gi|413917478|gb|AFW57410.1| nucleolin [Zea mays]
Length = 140
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
TT E L +AF++FG+V A ++ D+ SKG+G+V ++T EEA K + +GK LDG V
Sbjct: 46 TTSEGLREAFAEFGEVLHARVVTDRVSGFSKGFGFVRYATTEEAAKGIEGKDGKFLDGWV 105
Query: 65 IFVDNVRP 72
IF + +P
Sbjct: 106 IFAEYAKP 113
>gi|115473215|ref|NP_001060206.1| Os07g0602600 [Oryza sativa Japonica Group]
gi|113611742|dbj|BAF22120.1| Os07g0602600 [Oryza sativa Japonica Group]
gi|222637411|gb|EEE67543.1| hypothetical protein OsJ_25023 [Oryza sativa Japonica Group]
Length = 238
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 46/67 (68%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++T L D FS +G V EA II+D+ +SKGYG++T+++ EEA A+ M+GK L
Sbjct: 38 LSYATDDTTLKDVFSHYGDVLEARIIIDRDTGKSKGYGFITYTSSEEAAAAVTAMDGKDL 97
Query: 61 DGRVIFV 67
GR++ V
Sbjct: 98 QGRIVRV 104
>gi|301764797|ref|XP_002917810.1| PREDICTED: putative RNA-binding protein 3-like isoform 1
[Ailuropoda melanoleuca]
Length = 156
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F+T ++ L D FS FG ++E ++ D+ RS+G+G++TF+ E A A+ MNG+ L
Sbjct: 13 LNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESL 72
Query: 61 DGRVIFVDNVRPSRR 75
DGR I VD+ S R
Sbjct: 73 DGRQIRVDHAGKSAR 87
>gi|13785947|gb|AAK39523.1| RNA-binding motif protein 3 [Rattus norvegicus]
Length = 127
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F+T ++ L D FS FG ++E ++ D+ RS+G+G++TF+ E A A+ MNG+ L
Sbjct: 13 LNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESL 72
Query: 61 DGRVIFVDNVRPSRR 75
DGR I VD+ S R
Sbjct: 73 DGRQIRVDHAGKSAR 87
>gi|281353659|gb|EFB29243.1| hypothetical protein PANDA_006181 [Ailuropoda melanoleuca]
Length = 148
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F+T ++ L D FS FG ++E ++ D+ RS+G+G++TF+ E A A+ MNG+ L
Sbjct: 13 LNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESL 72
Query: 61 DGRVIFVDNVRPSRR 75
DGR I VD+ S R
Sbjct: 73 DGRQIRVDHAGKSAR 87
>gi|118100597|ref|XP_417367.2| PREDICTED: embryonic polyadenylate-binding protein-like [Gallus
gallus]
Length = 632
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFVDN 69
L + FS+FG+ ++MD RSKG+G+V F EEAQKA+ADMNGK ++GR+++V
Sbjct: 207 LREIFSRFGKTLSVKVMMDH-TGRSKGFGFVNFEKHEEAQKAVADMNGKEINGRMVYVG- 264
Query: 70 VRPSRRYNTDAPLARQLPQSPEE 92
R +R + L R+ Q +E
Sbjct: 265 -RAQKRLERQSELKRKFEQMKQE 286
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S + L D FS FG + ++ D+ N S+G+G+V F T+E A +A+ MNG LL+ R
Sbjct: 109 SIDNKALYDTFSAFGNILSCKVVCDE--NGSRGHGFVHFETQEAATRAIQTMNGMLLNDR 166
Query: 64 VIFVDNVR 71
+FV + +
Sbjct: 167 KVFVGHFK 174
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L FS +G +T A ++ + G SKG+G+V FS+ EEA KA+ +MNG+++ + ++V
Sbjct: 308 ERLRKEFSPYGTITSAKVMTEGG--HSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYV 365
>gi|413938711|gb|AFW73262.1| chloroplast protein synthesis 4 [Zea mays]
Length = 400
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 48/75 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T+++ L AF FG++ E IIMD+ RSKGY +V ++TEE AL MNG+++
Sbjct: 308 LSFYTSEKTLRAAFEPFGELVEVKIIMDRISKRSKGYAFVEYTTEEAGGAALKAMNGQII 367
Query: 61 DGRVIFVDNVRPSRR 75
+G +I VD + R
Sbjct: 368 NGWMIVVDVAKTRSR 382
>gi|388493798|gb|AFK34965.1| unknown [Medicago truncatula]
Length = 185
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 45/68 (66%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
TT E L +AF +FG+V + ++ D+ SKG+GYV ++T E+A K + M+GK L+G +
Sbjct: 55 TTSETLREAFKKFGEVKQVRVVADRVSGYSKGFGYVRYATSEDAAKGIQGMDGKFLEGWI 114
Query: 65 IFVDNVRP 72
+F + RP
Sbjct: 115 VFAEYARP 122
>gi|344250008|gb|EGW06112.1| Putative RNA-binding protein 3 [Cricetulus griseus]
Length = 169
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F+T ++ L D FS FG ++E ++ D+ RS+G+G++TF+ E A A+ MNG+ L
Sbjct: 13 LNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESL 72
Query: 61 DGRVIFVDNVRPSRR 75
DGR I VD+ S R
Sbjct: 73 DGRQIRVDHAGKSAR 87
>gi|326931817|ref|XP_003212020.1| PREDICTED: embryonic polyadenylate-binding protein-like [Meleagris
gallopavo]
Length = 633
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFVDN 69
L + FS+FG+ ++MD RSKG+G+V F EEAQKA+ADMNGK ++GR+++V
Sbjct: 207 LREIFSRFGKTLSVKVMMDN-TGRSKGFGFVNFEKHEEAQKAVADMNGKEINGRMVYVG- 264
Query: 70 VRPSRRYNTDAPLARQLPQSPEE 92
R +R + L R+ Q +E
Sbjct: 265 -RAQKRLERQSELKRKFEQMKQE 286
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S + L D FS FG + ++ D+ N S+G+G+V F T+E A +A+ MNG LL+ R
Sbjct: 109 SIDNKALYDTFSAFGNILSCKVVCDE--NGSRGHGFVHFETQEAATRAIETMNGMLLNDR 166
Query: 64 VIFVDNVR 71
+FV + +
Sbjct: 167 KVFVGHFK 174
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L FS +G +T A ++ + G SKG+G+V FS+ EEA KA+ +MNG+++ + ++V
Sbjct: 308 ERLRKEFSPYGTITSAKVMTEGG--HSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYV 365
>gi|356517068|ref|XP_003527212.1| PREDICTED: uncharacterized protein LOC100777821 [Glycine max]
Length = 182
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T + L AFSQFG++ E+ +I D+ RS+G+G+VTF+TE+ + A+ MNG+ L
Sbjct: 15 LAWATDHDALEKAFSQFGEIVESKVINDRETGRSRGFGFVTFATEQAMRDAIEGMNGQNL 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRNITVN 82
>gi|259490527|ref|NP_001159310.1| uncharacterized protein LOC100304402 [Zea mays]
gi|223943329|gb|ACN25748.1| unknown [Zea mays]
gi|413938710|gb|AFW73261.1| chloroplast protein synthesis 4 [Zea mays]
Length = 398
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 48/75 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T+++ L AF FG++ E IIMD+ RSKGY +V ++TEE AL MNG+++
Sbjct: 306 LSFYTSEKTLRAAFEPFGELVEVKIIMDRISKRSKGYAFVEYTTEEAGGAALKAMNGQII 365
Query: 61 DGRVIFVDNVRPSRR 75
+G +I VD + R
Sbjct: 366 NGWMIVVDVAKTRSR 380
>gi|187373099|gb|ACD03270.1| glycine-rich RNA-binding protein [Nicotiana tabacum]
Length = 157
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++TT + L DAFSQ+G++ ++ II D+ RS+G+G+VTF E+ + A+ MNG+ L
Sbjct: 13 LAWATTDQTLGDAFSQYGEIVDSKIINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDL 72
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 73 DGRNITVN 80
>gi|387861095|gb|AFK08577.1| glycine-rich RNA binding protein 2b [Camelina sativa]
gi|387861101|gb|AFK08580.1| glycine-rich RNA binding protein 2b [Camelina sativa]
Length = 156
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T L DAF+ FG+V +A +I+D+ RS+G+G+V FS E A A+++M+GK L
Sbjct: 43 LSWGTDDASLRDAFAHFGEVVDAKVIVDRETGRSRGFGFVNFSDETAASAAISEMDGKDL 102
Query: 61 DGRVIFVD--NVRPS 73
+GR I V+ N RPS
Sbjct: 103 NGRNIRVNPANDRPS 117
>gi|119357086|ref|YP_911730.1| RNP-1 like RNA-binding protein [Chlorobium phaeobacteroides DSM
266]
gi|119354435|gb|ABL65306.1| RNP-1 like RNA-binding protein [Chlorobium phaeobacteroides DSM
266]
Length = 90
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 49/72 (68%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++ +++ L DAFSQFGQV A II DK RSKG+G++ S + EA++A+ MN + L
Sbjct: 8 LAYTVSEDDLRDAFSQFGQVDSANIINDKFSGRSKGFGFIEMSNDSEAREAIESMNDQDL 67
Query: 61 DGRVIFVDNVRP 72
GR I V+ +P
Sbjct: 68 KGRTIKVNEAKP 79
>gi|355757333|gb|EHH60858.1| RNA-binding motif protein 3 [Macaca fascicularis]
Length = 157
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F+T ++ L D FS FG ++E ++ D+ RS+G+G++TF+ E A A+ MNG+ L
Sbjct: 13 LNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRAMNGESL 72
Query: 61 DGRVIFVDNVRPSRR 75
DGR I VD+ S R
Sbjct: 73 DGRQIRVDHAGKSAR 87
>gi|221221302|gb|ACM09312.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 131
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 48/68 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF TT++ LA+AFS++G + + +IMD+ R +G+G+V + E+A+ A+ MNG+ L
Sbjct: 12 LSFDTTEQSLAEAFSKYGNIAKCDVIMDRETGRPRGFGFVKYDNAEDAKDAMEGMNGQSL 71
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 72 DGRTIRVN 79
>gi|5803137|ref|NP_006734.1| putative RNA-binding protein 3 [Homo sapiens]
gi|383872909|ref|NP_001244635.1| RNA binding motif (RNP1, RRM) protein 3 [Macaca mulatta]
gi|332860686|ref|XP_521047.2| PREDICTED: putative RNA-binding protein 3 isoform 2 [Pan
troglodytes]
gi|332860688|ref|XP_003317502.1| PREDICTED: putative RNA-binding protein 3 isoform 1 [Pan
troglodytes]
gi|397471359|ref|XP_003807263.1| PREDICTED: putative RNA-binding protein 3 isoform 1 [Pan
paniscus]
gi|397471361|ref|XP_003807264.1| PREDICTED: putative RNA-binding protein 3 isoform 2 [Pan
paniscus]
gi|402910082|ref|XP_003917720.1| PREDICTED: putative RNA-binding protein 3 [Papio anubis]
gi|426395802|ref|XP_004064149.1| PREDICTED: putative RNA-binding protein 3 isoform 1 [Gorilla
gorilla gorilla]
gi|426395804|ref|XP_004064150.1| PREDICTED: putative RNA-binding protein 3 isoform 2 [Gorilla
gorilla gorilla]
gi|1710620|sp|P98179.1|RBM3_HUMAN RecName: Full=Putative RNA-binding protein 3; AltName:
Full=RNA-binding motif protein 3; AltName: Full=RNPL
gi|881954|gb|AAB17212.1| RNPL [Homo sapiens]
gi|13905080|gb|AAH06825.1| RNA binding motif (RNP1, RRM) protein 3 [Homo sapiens]
gi|119571152|gb|EAW50767.1| RNA binding motif (RNP1, RRM) protein 3, isoform CRA_c [Homo
sapiens]
gi|119571153|gb|EAW50768.1| RNA binding motif (RNP1, RRM) protein 3, isoform CRA_c [Homo
sapiens]
gi|380815298|gb|AFE79523.1| putative RNA-binding protein 3 [Macaca mulatta]
gi|380815300|gb|AFE79524.1| putative RNA-binding protein 3 [Macaca mulatta]
gi|380815302|gb|AFE79525.1| putative RNA-binding protein 3 [Macaca mulatta]
gi|383420491|gb|AFH33459.1| putative RNA-binding protein 3 [Macaca mulatta]
gi|383420493|gb|AFH33460.1| putative RNA-binding protein 3 [Macaca mulatta]
gi|384948600|gb|AFI37905.1| putative RNA-binding protein 3 [Macaca mulatta]
gi|384948602|gb|AFI37906.1| putative RNA-binding protein 3 [Macaca mulatta]
gi|410228038|gb|JAA11238.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
Length = 157
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F+T ++ L D FS FG ++E ++ D+ RS+G+G++TF+ E A A+ MNG+ L
Sbjct: 13 LNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRAMNGESL 72
Query: 61 DGRVIFVDNVRPSRR 75
DGR I VD+ S R
Sbjct: 73 DGRQIRVDHAGKSAR 87
>gi|296088109|emb|CBI35498.3| unnamed protein product [Vitis vinifera]
Length = 153
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 51/74 (68%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ST+ L +AF +FG + EA +++DK RS+G+G+V+F ++ + A+ +M+G L
Sbjct: 14 LSWSTSDRSLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVSFDDKQAMEDAIKEMHGMDL 73
Query: 61 DGRVIFVDNVRPSR 74
DGR I VD +P++
Sbjct: 74 DGRSITVDKAQPNQ 87
>gi|2226370|gb|AAC50020.1| RNA-binding protein [Nicotiana glutinosa]
Length = 156
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++TT + L DAFSQ+G++ ++ II D+ RS+G+G+VTF E+ + A+ MNG+ L
Sbjct: 13 LAWATTDQTLGDAFSQYGEILDSKIINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDL 72
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 73 DGRNITVN 80
>gi|344292751|ref|XP_003418089.1| PREDICTED: putative RNA-binding protein 3-like [Loxodonta
africana]
Length = 154
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F+T ++ L D FS FG ++E ++ D+ RS+G+G++TF+ E A A+ MNG+ L
Sbjct: 13 LNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESL 72
Query: 61 DGRVIFVDNVRPSRR 75
DGR I VD+ S R
Sbjct: 73 DGRQIRVDHAGKSAR 87
>gi|431893576|gb|ELK03439.1| Putative RNA-binding protein 3 [Pteropus alecto]
Length = 213
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F+T ++ L D FS FG ++E ++ D+ RS+G+G++TF+ E A A+ MNG+ L
Sbjct: 70 LNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESL 129
Query: 61 DGRVIFVDNVRPSRR 75
DGR I VD+ S R
Sbjct: 130 DGRQIRVDHAGKSAR 144
>gi|291407441|ref|XP_002719942.1| PREDICTED: RNA binding motif protein 3 [Oryctolagus cuniculus]
Length = 155
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F+T ++ L D FS FG ++E ++ D+ RS+G+G++TF+ E A A+ MNG+ L
Sbjct: 13 LNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESL 72
Query: 61 DGRVIFVDNVRPSRR 75
DGR I VD+ S R
Sbjct: 73 DGRQIRVDHAGKSAR 87
>gi|359806697|ref|NP_001241034.1| uncharacterized protein LOC100799124 [Glycine max]
gi|255645259|gb|ACU23127.1| unknown [Glycine max]
Length = 275
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 54/74 (72%), Gaps = 2/74 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
VS+ST ++ L +AFS++G+V +A IIMD+ RS+G+G++T+++ EEA A+ ++G+ L
Sbjct: 49 VSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAIQALDGQDL 108
Query: 61 DGRVIFVD--NVRP 72
GR I V+ N RP
Sbjct: 109 HGRPIRVNYANERP 122
>gi|82623423|gb|ABB87126.1| putative glycine-rich RNA binding protein-like [Solanum
tuberosum]
Length = 178
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++TT L++AFSQ+G+V E+ II D+ RS+G+G+VTF E+ + A+ MNG+ L
Sbjct: 13 LAWATTDNTLSEAFSQYGEVVESKIINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDL 72
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 73 DGRNITVN 80
>gi|332255488|ref|XP_003276864.1| PREDICTED: putative RNA-binding protein 3 isoform 1 [Nomascus
leucogenys]
Length = 157
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F+T ++ L D FS FG ++E ++ D+ RS+G+G++TF+ E A A+ MNG+ L
Sbjct: 13 LNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRAMNGESL 72
Query: 61 DGRVIFVDNVRPSRR 75
DGR I VD+ S R
Sbjct: 73 DGRQIRVDHAGKSAR 87
>gi|213510736|ref|NP_001133148.1| cold inducible RNA binding protein [Salmo salar]
gi|197632151|gb|ACH70799.1| hyperosmotic glycine rich protein-like [Salmo salar]
gi|221219968|gb|ACM08645.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|221221054|gb|ACM09188.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 154
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 48/68 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF TT++ LA+AFS++G + + +IMD+ R +G+G+V + E+A+ A+ MNG+ L
Sbjct: 12 LSFDTTEQSLAEAFSKYGNIAKCDVIMDRETGRPRGFGFVKYDNAEDAKDAMEGMNGQSL 71
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 72 DGRTIRVN 79
>gi|225463887|ref|XP_002264022.1| PREDICTED: uncharacterized protein LOC100256416 isoform 1 [Vitis
vinifera]
gi|359493015|ref|XP_003634493.1| PREDICTED: uncharacterized protein LOC100256416 isoform 2 [Vitis
vinifera]
Length = 207
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 49/72 (68%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ST+ L +AF +FG + EA +++DK RS+G+G+V+F ++ + A+ +M+G L
Sbjct: 14 LSWSTSDRSLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVSFDDKQAMEDAIKEMHGMDL 73
Query: 61 DGRVIFVDNVRP 72
DGR I VD +P
Sbjct: 74 DGRSITVDKAQP 85
>gi|121595278|ref|YP_987174.1| RNP-1 like RNA-binding protein [Acidovorax sp. JS42]
gi|222111562|ref|YP_002553826.1| rnp-1 like RNA-binding protein [Acidovorax ebreus TPSY]
gi|120607358|gb|ABM43098.1| RNP-1 like RNA-binding protein [Acidovorax sp. JS42]
gi|221731006|gb|ACM33826.1| RNP-1 like RNA-binding protein [Acidovorax ebreus TPSY]
Length = 102
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++S E L FSQFG VT A ++M++ RSKG+G+V ++ EAQ A+ +NG+ +
Sbjct: 10 LAYSVRDESLHQQFSQFGSVTSAKVMMERDTGRSKGFGFVEMGSDSEAQDAINGLNGRSV 69
Query: 61 DGRVIFVDNVRP 72
DGR + V+ RP
Sbjct: 70 DGRALTVNVARP 81
>gi|6911142|gb|AAF31402.1| putative glycine-rich RNA binding protein 1 [Catharanthus roseus]
Length = 137
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 51/72 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++TT + L++AFSQ+G+V E+ II D+ RS+G+G+VTF E+ + A+ MNG+ L
Sbjct: 15 LAWATTDQSLSEAFSQYGEVLESKIINDRETGRSRGFGFVTFGDEKSMKDAIEGMNGQTL 74
Query: 61 DGRVIFVDNVRP 72
DGR + V+ +
Sbjct: 75 DGRNVTVNEAQS 86
>gi|410255528|gb|JAA15731.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
Length = 157
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F+T ++ L D FS FG ++E ++ D+ RS+G+G++TF+ E A A+ MNG+ L
Sbjct: 13 LNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRAMNGESL 72
Query: 61 DGRVIFVDNVRPSRR 75
DGR I VD+ S R
Sbjct: 73 DGRQIRVDHAGKSAR 87
>gi|356558254|ref|XP_003547422.1| PREDICTED: cold-inducible RNA-binding protein-like [Glycine max]
Length = 86
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ TT+E L FS FG VT+A + +D R KG+G+V+F +E EA+KAL MNG+++
Sbjct: 14 IMLYTTQEQLKKLFSPFGLVTQADLALDPITKRPKGFGFVSFKSEIEAEKALRAMNGRIV 73
Query: 61 DGRVIFVD 68
GR+I V+
Sbjct: 74 SGRLILVE 81
>gi|212546539|ref|XP_002153423.1| glycine-rich RNA-binding protein, putative [Talaromyces marneffei
ATCC 18224]
gi|210064943|gb|EEA19038.1| glycine-rich RNA-binding protein, putative [Talaromyces marneffei
ATCC 18224]
Length = 135
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 45/68 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ TT + L F +FG + EA +I D+ NRS+G+G+V FST+ EA A+ MN +
Sbjct: 9 LAWHTTDDTLRSGFEKFGTIEEAIVIKDRDTNRSRGFGFVRFSTDAEADAAIEGMNNQDF 68
Query: 61 DGRVIFVD 68
DGRVI VD
Sbjct: 69 DGRVIRVD 76
>gi|426257071|ref|XP_004022158.1| PREDICTED: putative RNA-binding protein 3 isoform 1 [Ovis aries]
gi|426257073|ref|XP_004022159.1| PREDICTED: putative RNA-binding protein 3 isoform 2 [Ovis aries]
gi|426257075|ref|XP_004022160.1| PREDICTED: putative RNA-binding protein 3 isoform 3 [Ovis aries]
gi|426257077|ref|XP_004022161.1| PREDICTED: putative RNA-binding protein 3 isoform 4 [Ovis aries]
gi|426257079|ref|XP_004022162.1| PREDICTED: putative RNA-binding protein 3 isoform 5 [Ovis aries]
Length = 160
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 48/75 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F+T + L D FS FG ++E ++ D+ RS+G+G++TF+ E A A+ MNG+ L
Sbjct: 13 LNFNTDERALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASNAMRAMNGESL 72
Query: 61 DGRVIFVDNVRPSRR 75
DGR I VD+ S R
Sbjct: 73 DGRQIRVDHAGKSAR 87
>gi|224078006|ref|XP_002190593.1| PREDICTED: embryonic polyadenylate-binding protein-like
[Taeniopygia guttata]
Length = 629
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFVDN 69
L + FS+FG+ ++MD RSKG+G+V F EEAQKA+ADMNGK ++GR+++V
Sbjct: 207 LREIFSRFGKTLSVKVMMDN-NGRSKGFGFVNFEKHEEAQKAVADMNGKEINGRLLYVG- 264
Query: 70 VRPSRRYNTDAPLARQLPQSPEE 92
R +R + L R+ Q +E
Sbjct: 265 -RAQKRLERQSELKRKFEQMKQE 286
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S + L D FS FG + ++ D+ N S+GYG+V F T E A +A+ MNG LL+ R
Sbjct: 109 SIDNKALYDTFSAFGNILSCKVVCDE--NGSRGYGFVHFETHEAATRAIETMNGMLLNDR 166
Query: 64 VIFVDNVR 71
+FV + +
Sbjct: 167 KVFVGHFK 174
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L FS +G +T A ++ + G RSKG+G+V FS+ EEA KA+ +MNG+++ + ++V
Sbjct: 308 ERLRKEFSPYGTITSAKVMTEGG--RSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYV 365
>gi|221220658|gb|ACM08990.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|304376965|gb|ACI70202.2| Cold-inducible RNA-binding protein [Salmo salar]
Length = 161
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF TT++ LA+AFS++G +++ +IMD+ R +G+G+V + E+A+ A+ MNG+ L
Sbjct: 12 LSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDAMNGQSL 71
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 72 DGRTIRVN 79
>gi|198285593|gb|ACH85335.1| hyperosmotic glycine rich protein-like [Salmo salar]
gi|221219546|gb|ACM08434.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 160
Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF TT++ LA+AFS++G +++ +IMD+ R +G+G+V + E+A+ A+ MNG+ L
Sbjct: 12 LSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDAMNGQSL 71
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 72 DGRTIRVN 79
>gi|351706516|gb|EHB09435.1| Putative RNA-binding protein 3 [Heterocephalus glaber]
Length = 157
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 47/70 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F+T ++ L D FS FG ++E ++ D+ RS+G+G++TF+ E A A+ MNG+ L
Sbjct: 13 LNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESL 72
Query: 61 DGRVIFVDNV 70
DGR I VD+
Sbjct: 73 DGRQIRVDHA 82
>gi|209734900|gb|ACI68319.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|303657347|gb|ADM15872.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 114
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF TT++ LA+AFS++G +++ +IMD+ R +G+G+V + E+A+ A+ MNG+ L
Sbjct: 12 LSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDAMNGQSL 71
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 72 DGRTIRVN 79
>gi|213513270|ref|NP_001133190.1| hyperosmotic glycine rich protein [Salmo salar]
gi|197632401|gb|ACH70924.1| hyperosmotic glycine rich protein [Salmo salar]
Length = 126
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF TT++ LA+AFS++G +++ +IMD+ R +G+G+V + E+A+ A+ MNG+ L
Sbjct: 12 LSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDAMNGQSL 71
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 72 DGRTIRVN 79
>gi|115472673|ref|NP_001059935.1| Os07g0549800 [Oryza sativa Japonica Group]
gi|28564803|dbj|BAC57733.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|113611471|dbj|BAF21849.1| Os07g0549800 [Oryza sativa Japonica Group]
gi|125600644|gb|EAZ40220.1| hypothetical protein OsJ_24665 [Oryza sativa Japonica Group]
gi|215767980|dbj|BAH00209.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 133
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 46/67 (68%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
TT + L +AFS+FGQV EA +I D+ S+G+G+V ++T EEA + + M+GK LDG V
Sbjct: 46 TTSDGLREAFSKFGQVIEARVITDRISGYSRGFGFVKYATVEEAGEGIKGMDGKFLDGWV 105
Query: 65 IFVDNVR 71
IF + +
Sbjct: 106 IFAEYAK 112
>gi|357137588|ref|XP_003570382.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 305
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++ T EML DAF Q G V A ++ D RS+GYG+V +ST+EE +A+ +NG +
Sbjct: 231 LSWTVTPEMLTDAFQQCGDVVGARVLYDGETGRSRGYGFVCYSTKEEMDQAIETLNGTEI 290
Query: 61 DGRVIFVDNVRPSRRY 76
+GR I V N+ +RY
Sbjct: 291 EGREIRV-NLALGKRY 305
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 29/44 (65%)
Query: 25 IIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFVD 68
++ D+ RS+G+ +VT ST E+ ++ + +++G L GR + V+
Sbjct: 164 VLYDRTTGRSRGFAFVTMSTLEDCERVIKNLDGTLYSGRTMRVN 207
>gi|357143694|ref|XP_003573016.1| PREDICTED: uncharacterized protein LOC100843274 [Brachypodium
distachyon]
Length = 387
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T+++ L AF FG++ E IIMDK RSKGY ++ ++TE+ AL MNG+++
Sbjct: 295 LSFYTSEKTLRAAFEPFGELVEVKIIMDKISKRSKGYAFIEYTTEDAGGAALKAMNGEII 354
Query: 61 DGRVIFVDNVRPSRR 75
+G +I VD + + R
Sbjct: 355 NGWMIVVDVAKTNLR 369
>gi|326527061|dbj|BAK04472.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 139
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 8/85 (9%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
TT + L +AFS+FGQVT+A +I D+ S+G+G+V ++T EEA + + M+GK DG V
Sbjct: 51 TTSDGLREAFSKFGQVTDARVITDRISGYSRGFGFVKYATVEEAAEGIKGMDGKFFDGWV 110
Query: 65 IFVDNVRPSRRYNTDAPLARQLPQS 89
IF + + A+Q PQS
Sbjct: 111 IFAEYAKQRE--------AQQPPQS 127
>gi|197128622|gb|ACH45120.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
Length = 171
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T +E L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEESLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|90075670|dbj|BAE87515.1| unnamed protein product [Macaca fascicularis]
Length = 135
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F+T ++ L D FS FG ++E ++ D+ RS+G+G++TF+ E A A+ MNG+ L
Sbjct: 13 LNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRAMNGESL 72
Query: 61 DGRVIFVDNVRPSRR 75
DGR I VD+ S R
Sbjct: 73 DGRQIRVDHAGKSAR 87
>gi|261862339|ref|NP_001159882.1| putative RNA-binding protein 3 isoform 2 [Mus musculus]
gi|261862342|ref|NP_001159883.1| putative RNA-binding protein 3 isoform 2 [Mus musculus]
gi|6093936|sp|O89086.1|RBM3_MOUSE RecName: Full=Putative RNA-binding protein 3; AltName:
Full=RNA-binding motif protein 3
gi|3395381|dbj|BAA32060.1| rbm3 [Mus musculus]
gi|12834559|dbj|BAB22957.1| unnamed protein product [Mus musculus]
gi|12840849|dbj|BAB24981.1| unnamed protein product [Mus musculus]
gi|13879226|gb|AAH06580.1| Rbm3 protein [Mus musculus]
gi|15983757|gb|AAL10707.1| RNA-binding motif protein 3 [Mus musculus]
gi|74180334|dbj|BAE32335.1| unnamed protein product [Mus musculus]
gi|74198712|dbj|BAE39828.1| unnamed protein product [Mus musculus]
gi|74228699|dbj|BAE21846.1| unnamed protein product [Mus musculus]
gi|76780243|gb|AAI06177.1| Rbm3 protein [Mus musculus]
gi|148702004|gb|EDL33951.1| mCG116386, isoform CRA_a [Mus musculus]
gi|148702009|gb|EDL33956.1| mCG116386, isoform CRA_a [Mus musculus]
Length = 153
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F+T ++ L D FS FG ++E ++ D+ RS+G+G++TF+ E A A+ MNG+ L
Sbjct: 13 LNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESL 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD+ S
Sbjct: 73 DGRQIRVDHAGKS 85
>gi|125558733|gb|EAZ04269.1| hypothetical protein OsI_26412 [Oryza sativa Indica Group]
Length = 133
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 46/67 (68%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
TT + L +AFS+FGQV EA +I D+ S+G+G+V ++T EEA + + M+GK LDG V
Sbjct: 46 TTSDGLREAFSKFGQVIEARVITDRISGYSRGFGFVKYATVEEAGEGIKGMDGKFLDGWV 105
Query: 65 IFVDNVR 71
IF + +
Sbjct: 106 IFAEYAK 112
>gi|37497112|ref|NP_058089.2| putative RNA-binding protein 3 isoform 1 [Mus musculus]
gi|261862337|ref|NP_001159881.1| putative RNA-binding protein 3 isoform 1 [Mus musculus]
gi|26340316|dbj|BAC33821.1| unnamed protein product [Mus musculus]
gi|26352956|dbj|BAC40108.1| unnamed protein product [Mus musculus]
gi|37589528|gb|AAH59098.1| Rbm3 protein [Mus musculus]
Length = 154
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 47/70 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F+T ++ L D FS FG ++E ++ D+ RS+G+G++TF+ E A A+ MNG+ L
Sbjct: 13 LNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESL 72
Query: 61 DGRVIFVDNV 70
DGR I VD+
Sbjct: 73 DGRQIRVDHA 82
>gi|121604834|ref|YP_982163.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans
CJ2]
gi|120593803|gb|ABM37242.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans
CJ2]
Length = 132
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ ++ E L +F QFG VT A ++M++ RSKG+G+V ++ EAQ A+A MNG+ L
Sbjct: 10 LPYTVRDEDLQQSFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIAGMNGQSL 69
Query: 61 DGRVIFVDNVRP 72
GR I V+ RP
Sbjct: 70 GGRSITVNEARP 81
>gi|21388662|dbj|BAC00787.1| glycine-rich RNA-binding protein [Physcomitrella patens]
Length = 155
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 50/68 (73%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ TT + + +AFS FG+VTE II D+ RS+G+G+VTF+T+++A+ AL ++G+ L
Sbjct: 49 LAWGTTDDNIKEAFSAFGEVTEVKIICDRDTGRSRGFGFVTFATDQDAEAALQALDGRDL 108
Query: 61 DGRVIFVD 68
GR I V+
Sbjct: 109 AGRTIRVN 116
>gi|302815033|ref|XP_002989199.1| hypothetical protein SELMODRAFT_37572 [Selaginella
moellendorffii]
gi|300143099|gb|EFJ09793.1| hypothetical protein SELMODRAFT_37572 [Selaginella
moellendorffii]
Length = 166
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 49/72 (68%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ST + L +F QFG++ EA +I+D+G RS+G+G+VTF+ + +A+ ++ K L
Sbjct: 10 LSWSTDDQALESSFRQFGRILEAKVIIDRGSGRSRGFGFVTFADQRAMDEAIDRLHNKEL 69
Query: 61 DGRVIFVDNVRP 72
DGRV+ V+ P
Sbjct: 70 DGRVVTVNKALP 81
>gi|410080926|ref|XP_003958043.1| hypothetical protein KAFR_0F03120 [Kazachstania africana CBS 2517]
gi|372464630|emb|CCF58908.1| hypothetical protein KAFR_0F03120 [Kazachstania africana CBS 2517]
Length = 412
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+S E L + F G V A +I ++G +RS+GYGYV F +E A+KA+ +M+GK +
Sbjct: 172 LSWSIDDEWLKNEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKEYAEKAVKEMHGKEI 231
Query: 61 DGRVIFVD--NVRPSRRYNTDAPLARQLPQSPEE 92
DGR I D +P+ N A +P P E
Sbjct: 232 DGREINCDMSTSKPAAGNNDRAKKFGDVPSEPSE 265
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 43/72 (59%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF+ ++ +++ FS+FG++ I + KG+GYV ++ E+A+KAL + G+ +
Sbjct: 272 LSFNADRDNISEMFSKFGEIVSVRIPTHPETEQPKGFGYVQYTNVEDAKKALDALQGEYI 331
Query: 61 DGRVIFVDNVRP 72
D R + +D P
Sbjct: 332 DNRPVRLDFSTP 343
>gi|242045928|ref|XP_002460835.1| hypothetical protein SORBIDRAFT_02g035890 [Sorghum bicolor]
gi|241924212|gb|EER97356.1| hypothetical protein SORBIDRAFT_02g035890 [Sorghum bicolor]
Length = 131
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 46/67 (68%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
TT L +AFS+FGQV EA +I D+ S+G+G+V ++T +EA +A+ M+GK LDG V
Sbjct: 47 TTSNGLKEAFSKFGQVIEARVITDRISGYSRGFGFVKYATVQEAGEAIKGMDGKFLDGWV 106
Query: 65 IFVDNVR 71
IF + +
Sbjct: 107 IFAEYAK 113
>gi|356511826|ref|XP_003524623.1| PREDICTED: uncharacterized protein LOC100782808 [Glycine max]
Length = 274
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 54/74 (72%), Gaps = 2/74 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
VS+ST ++ L +AFS++G+V +A IIMD+ RS+G+G++T+++ EEA A+ ++G+ L
Sbjct: 49 VSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAIQALDGQDL 108
Query: 61 DGRVIFVD--NVRP 72
GR I V+ N RP
Sbjct: 109 HGRPIRVNYANERP 122
>gi|359478318|ref|XP_003632106.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Vitis vinifera]
gi|296084274|emb|CBI24662.3| unnamed protein product [Vitis vinifera]
Length = 108
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 47/67 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T + +L DAF Q+G++ E +I D +SKGYG+V F+++++A AL +M+G+ L
Sbjct: 36 LSYDTNETILKDAFGQYGEIIEVKVICDHVSGKSKGYGFVQFTSDDDAHIALKEMDGQSL 95
Query: 61 DGRVIFV 67
DGR I V
Sbjct: 96 DGRNIRV 102
>gi|212722336|ref|NP_001132163.1| uncharacterized protein LOC100193584 [Zea mays]
gi|194693616|gb|ACF80892.1| unknown [Zea mays]
Length = 234
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 50/71 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T+ E L +AF+ +G++ ++ +I D+ RS+G+G+VTFS+E A+ +MNGK L
Sbjct: 90 LAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKEL 149
Query: 61 DGRVIFVDNVR 71
DGR I V+ +
Sbjct: 150 DGRNITVNQAQ 160
>gi|168016725|ref|XP_001760899.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687908|gb|EDQ74288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 155
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 50/68 (73%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ TT + + +AFS FG+VTE II D+ RS+G+G+VTF+T+++A+ AL ++G+ L
Sbjct: 49 LAWGTTDDNIKEAFSAFGEVTEVKIICDRDTGRSRGFGFVTFATDQDAEAALQALDGRDL 108
Query: 61 DGRVIFVD 68
GR I V+
Sbjct: 109 AGRTIRVN 116
>gi|302811189|ref|XP_002987284.1| hypothetical protein SELMODRAFT_37571 [Selaginella
moellendorffii]
gi|300144919|gb|EFJ11599.1| hypothetical protein SELMODRAFT_37571 [Selaginella
moellendorffii]
Length = 163
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 49/72 (68%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ST + L +F QFG++ EA +I+D+G RS+G+G+VTF+ + +A+ ++ K L
Sbjct: 10 LSWSTDDQALESSFRQFGRILEAKVIIDRGSGRSRGFGFVTFADQRAMDEAIDRLHNKEL 69
Query: 61 DGRVIFVDNVRP 72
DGRV+ V+ P
Sbjct: 70 DGRVVTVNKALP 81
>gi|297741463|emb|CBI32594.3| unnamed protein product [Vitis vinifera]
Length = 121
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T + L AFSQFG++ E+ II D+ RS+G+G+VTFS+E+ + A+ MNG+ L
Sbjct: 15 LAWATDDQSLERAFSQFGEILESKIINDRETGRSRGFGFVTFSSEQSMRDAIEGMNGQNL 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRNITVN 82
>gi|148235865|ref|NP_001079794.1| cold-inducible RNA-binding protein B [Xenopus laevis]
gi|82247034|sp|Q9DED4.1|CIRBB_XENLA RecName: Full=Cold-inducible RNA-binding protein B; AltName:
Full=Cold-inducible RNA-binding protein 2;
Short=xCIRP2; AltName: Full=Glycine-rich RNA-binding
protein CIRP-B
gi|11761319|dbj|BAB19129.1| cold-inducible RNA binding protein 2 [Xenopus laevis]
gi|32450232|gb|AAH54250.1| Xcirp2 protein [Xenopus laevis]
Length = 166
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F T +E L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 12 LNFDTNEESLEQVFSKYGQISEVVVVKDRETKRSRGFGFVTFENPDDAKDAMMAMNGKAV 71
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 72 DGRQIRVDQAGKS 84
>gi|194385818|dbj|BAG65284.1| unnamed protein product [Homo sapiens]
Length = 263
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 47/70 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNV 70
DGR I VD
Sbjct: 73 DGRQIRVDQA 82
>gi|395325784|gb|EJF58201.1| hypothetical protein DICSQDRAFT_67439, partial [Dichomitus
squalens LYAD-421 SS1]
Length = 94
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 50/68 (73%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++TT + L +AFS +GQ+ ++ ++ D+ RS+G+G+VTFS+ EAQ A+A +N + L
Sbjct: 2 LSWNTTDDNLRNAFSTYGQILDSIVMRDRDTGRSRGFGFVTFSSGSEAQSAIASLNEQEL 61
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 62 DGRRIKVN 69
>gi|359475330|ref|XP_003631658.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Vitis
vinifera]
Length = 162
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T + L AFSQFG++ E+ II D+ RS+G+G+VTFS+E+ + A+ MNG+ L
Sbjct: 15 LAWATDDQSLERAFSQFGEILESKIINDRETGRSRGFGFVTFSSEQSMRDAIEGMNGQNL 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRNITVN 82
>gi|407262829|ref|XP_003945671.1| PREDICTED: putative RNA-binding protein 3-like [Mus musculus]
Length = 154
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F+T ++ L D FS FG ++E ++ D+ RS+G+G++TF+ E A A+ MNG+ L
Sbjct: 13 LNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESL 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD+ S
Sbjct: 73 DGRQIRVDHAGKS 85
>gi|55778182|gb|AAH86491.1| Rbm3 protein [Mus musculus]
Length = 128
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F+T ++ L D FS FG ++E ++ D+ RS+G+G++TF+ E A A+ MNG+ L
Sbjct: 13 LNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESL 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD+ S
Sbjct: 73 DGRQIRVDHAGKS 85
>gi|158516903|gb|ABW70168.1| putative glycine-rich RNA-binding protein 2 [Bambusa oldhamii]
Length = 162
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 53/75 (70%), Gaps = 2/75 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T + L DAF+ FG+V EA +I D+ +S+G+G+V+FS ++A+ A++ M+G+ L
Sbjct: 44 LSWGTDDQSLKDAFTSFGEVVEARVITDRDTGKSRGFGFVSFSNGDDAKNAMSSMDGQEL 103
Query: 61 DGRVIFVD--NVRPS 73
+GR I V+ N RP+
Sbjct: 104 EGRNIHVNFANERPA 118
>gi|118488717|gb|ABK96169.1| unknown [Populus trichocarpa]
Length = 241
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T L +AF ++G V EA IIMD+ RS+G+G+VT+++ EEA A+ M+G+ L
Sbjct: 47 ISFQTDDNGLKEAFDKYGNVVEARIIMDRDTGRSRGFGFVTYTSSEEASSAIQAMDGQDL 106
Query: 61 DGRVIFVDNV--RPSRRY 76
GR + V+ RP R +
Sbjct: 107 HGRRVRVNYATERPQRTF 124
>gi|4704605|gb|AAD28176.1|AF109917_1 glycine-rich RNA-binding protein [Picea glauca]
Length = 155
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 48/68 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ST L +AFS +G+V E+ II D+ RS+G+G+VTF+ E+ + A+ MNGK+L
Sbjct: 15 LAWSTDDRSLQEAFSPYGEVVESKIISDRETGRSRGFGFVTFNDEQSMRDAIDAMNGKML 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRSITVN 82
>gi|365091634|ref|ZP_09328989.1| RNP-1 like RNA-binding protein [Acidovorax sp. NO-1]
gi|363415945|gb|EHL23069.1| RNP-1 like RNA-binding protein [Acidovorax sp. NO-1]
Length = 192
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ +S L AF QFG VT A ++M++ RSKG+G+V ++ EAQ A++ MNG+ L
Sbjct: 10 LPYSVRDGDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAISGMNGQPL 69
Query: 61 DGRVIFVDNVRP 72
GR I V+ RP
Sbjct: 70 GGRSIVVNEARP 81
>gi|221048043|gb|ACL98129.1| hyperosmotic glycine rich protein [Epinephelus coioides]
Length = 175
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 47/77 (61%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T +E LA AF ++G + + +I DK RS+G+G+V + ++A+ AL MNGK L
Sbjct: 12 LSFETNEESLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNCDDAKDALEGMNGKTL 71
Query: 61 DGRVIFVDNVRPSRRYN 77
DGR I VD R N
Sbjct: 72 DGRAIRVDEAGKGGRSN 88
>gi|357144628|ref|XP_003573359.1| PREDICTED: nucleolin-like [Brachypodium distachyon]
Length = 153
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 46/68 (67%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
TT + L +AF++FG+V A ++ D+ SKG+G+V +++ E+A K + M+GK LDG V
Sbjct: 59 TTTDGLREAFAKFGEVMHARVVTDRVTGFSKGFGFVRYASVEDASKGIEGMDGKFLDGWV 118
Query: 65 IFVDNVRP 72
IF + RP
Sbjct: 119 IFAEYARP 126
>gi|351723119|ref|NP_001235732.1| uncharacterized protein LOC100526902 [Glycine max]
gi|255631115|gb|ACU15923.1| unknown [Glycine max]
Length = 176
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ST+ L D F +FG++ EA +++DK RS+G+G+VTF ++ +A+ MNG L
Sbjct: 14 LAWSTSDRKLKDTFEKFGKLIEAKVVVDKFSGRSRGFGFVTFDDKKAMDEAIDAMNGMDL 73
Query: 61 DGRVIFVDNVRP 72
DGR I VD +P
Sbjct: 74 DGRTITVDRAQP 85
>gi|296235404|ref|XP_002762884.1| PREDICTED: putative RNA-binding protein 3 [Callithrix jacchus]
Length = 159
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F+T ++ L D FS FG ++E ++ D+ RS+G+G++TF+ E A A+ MNG+ L
Sbjct: 13 LNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRAMNGESL 72
Query: 61 DGRVIFVDNVRPSRR 75
DGR I VD+ S R
Sbjct: 73 DGRQIRVDHAGKSAR 87
>gi|198476543|ref|XP_001357388.2| GA10876 [Drosophila pseudoobscura pseudoobscura]
gi|198137744|gb|EAL34457.2| GA10876 [Drosophila pseudoobscura pseudoobscura]
Length = 625
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F T+EML F FG++ +IMD NRSKGYG++T+ E+A+KAL +NG L
Sbjct: 372 LHFDITEEMLRGIFEPFGKIDAIQLIMDTETNRSKGYGFITYHNAEDAKKALEQLNGFEL 431
Query: 61 DGRVIFVDNV 70
GR + V NV
Sbjct: 432 AGRPMKVGNV 441
>gi|297804934|ref|XP_002870351.1| hypothetical protein ARALYDRAFT_493528 [Arabidopsis lyrata subsp.
lyrata]
gi|297316187|gb|EFH46610.1| hypothetical protein ARALYDRAFT_493528 [Arabidopsis lyrata subsp.
lyrata]
Length = 154
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T + L DAF+ FG+V +A +I+D+ RS+G+G+V F+ E A A+++M+GK L
Sbjct: 42 LSWGTDDQSLRDAFAHFGEVVDAKVIVDRETGRSRGFGFVNFNDEGAASAAISEMDGKDL 101
Query: 61 DGRVIFVD--NVRPS 73
+GR I V+ N RPS
Sbjct: 102 NGRNIRVNVANERPS 116
>gi|2624326|emb|CAA05728.1| OsGRP1 [Oryza sativa Japonica Group]
Length = 160
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 49/74 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L AFS FG++ E+ II D+ RS+G+G+VTFS+E+ + A+ MNGK L
Sbjct: 15 LAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGKEL 74
Query: 61 DGRVIFVDNVRPSR 74
DGR I V+ + R
Sbjct: 75 DGRNITVNEAQSRR 88
>gi|357127016|ref|XP_003565182.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 109
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 43/68 (63%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T + L DAFSQ G VTE +I RSKGYG+V FS+E EA AL M+ +LL
Sbjct: 37 LSYDTNEIALKDAFSQHGTVTEVKVICHPVTGRSKGYGFVKFSSESEAAAALEKMSNELL 96
Query: 61 DGRVIFVD 68
DGR I V
Sbjct: 97 DGRNIRVH 104
>gi|469072|dbj|BAA03743.1| RNA-binding gricine-rich protein-1c [Nicotiana sylvestris]
Length = 165
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 48/68 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++TT L +AFSQ+G+V E+ II D+ RS+G+G+VTF E+ + A+ MNG+ L
Sbjct: 13 LAWATTDRTLGEAFSQYGEVLESKIINDRETGRSRGFGFVTFGDEKSMRDAIEGMNGQDL 72
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 73 DGRNITVN 80
>gi|333377706|ref|ZP_08469439.1| hypothetical protein HMPREF9456_01034 [Dysgonomonas mossii DSM
22836]
gi|332883726|gb|EGK04006.1| hypothetical protein HMPREF9456_01034 [Dysgonomonas mossii DSM
22836]
Length = 106
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+S L D F+++G+++ A +IMDK RSKGYG+V QKA+ ++NG
Sbjct: 8 LSYSINDNDLRDLFNEYGEISSAKVIMDKATGRSKGYGFVELEDNAAGQKAIEELNGAEY 67
Query: 61 DGRVIFVDNVRP 72
DGR I V RP
Sbjct: 68 DGRTISVSEARP 79
>gi|20257707|gb|AAM16019.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 48/68 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L +AFS +G+V E+ II+D+ RS+G+G+VTFS E+ + A+ MNGK L
Sbjct: 24 LAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXEDAMRSAIEGMNGKEL 83
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 84 DGRNITVN 91
>gi|59802525|gb|AAX07506.1| unknown [Gemmata sp. Wa1-1]
Length = 163
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ + T E L F +G V A +IMD+ RSKG+G+V ++++EAQ A+A MNG++
Sbjct: 71 LGYGVTDEQLRGMFGPYGSVQTAQVIMDRDTGRSKGFGFVEMNSDQEAQAAIAGMNGQMS 130
Query: 61 DGRVIFVDNVRP 72
+GR + V+ +P
Sbjct: 131 EGRALTVNEAKP 142
>gi|409080475|gb|EKM80835.1| hypothetical protein AGABI1DRAFT_112564 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426197375|gb|EKV47302.1| hypothetical protein AGABI2DRAFT_192533 [Agaricus bisporus var.
bisporus H97]
Length = 168
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++TT E L AFS FGQV ++ ++ D+ RS+G+G+VTFS EA A+ +N + L
Sbjct: 34 LSWNTTDETLRQAFSDFGQVLDSIVMRDRDTGRSRGFGFVTFSNSGEADAAINGLNEQEL 93
Query: 61 DGRVIFVD--NVRP 72
DGR I V+ N RP
Sbjct: 94 DGRRIKVNMANARP 107
>gi|115489714|ref|NP_001067344.1| Os12g0632000 [Oryza sativa Japonica Group]
gi|77557139|gb|ABA99935.1| Glycine-rich RNA-binding protein GRP1A, putative, expressed
[Oryza sativa Japonica Group]
gi|113649851|dbj|BAF30363.1| Os12g0632000 [Oryza sativa Japonica Group]
gi|125580173|gb|EAZ21319.1| hypothetical protein OsJ_36973 [Oryza sativa Japonica Group]
gi|215769456|dbj|BAH01685.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 162
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 49/74 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L AFS FG++ E+ II D+ RS+G+G+VTFS+E+ + A+ MNGK L
Sbjct: 15 LAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGKEL 74
Query: 61 DGRVIFVDNVRPSR 74
DGR I V+ + R
Sbjct: 75 DGRNITVNEAQSRR 88
>gi|333030558|ref|ZP_08458619.1| RNP-1 like RNA-binding protein [Bacteroides coprosuis DSM 18011]
gi|332741155|gb|EGJ71637.1| RNP-1 like RNA-binding protein [Bacteroides coprosuis DSM 18011]
Length = 104
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 45/72 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF+ E LA+ F +G VT A +I DK NRSKG+G+V +E A KA+ ++NG +
Sbjct: 8 LSFNVNDEGLAEIFEPYGAVTSARVIKDKFTNRSKGFGFVEMEDDEAATKAINELNGAEV 67
Query: 61 DGRVIFVDNVRP 72
DGR I V RP
Sbjct: 68 DGRPIAVSEARP 79
>gi|224059014|ref|XP_002299678.1| predicted protein [Populus trichocarpa]
gi|222846936|gb|EEE84483.1| predicted protein [Populus trichocarpa]
Length = 147
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ST+ L + F +FG + EA +++DK RS+G+G+VTF ++ + A+ MNG L
Sbjct: 14 LSWSTSDRGLKETFEKFGHLLEAKVVVDKFSGRSRGFGFVTFDEKKAMEDAIEGMNGMDL 73
Query: 61 DGRVIFVDNVRP 72
DGR I VD +P
Sbjct: 74 DGRTITVDKAQP 85
>gi|2827657|emb|CAA16611.1| putative protein [Arabidopsis thaliana]
gi|7268798|emb|CAB79003.1| putative protein [Arabidopsis thaliana]
Length = 115
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 56/92 (60%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ FST+++ L FS FG++ E +I D+ RSKGY ++ F+++++A A+ M+ ++
Sbjct: 10 LPFSTSEDFLKREFSAFGEIAEVKLIKDEAMKRSKGYAFIQFTSQDDAFLAIETMDRRMY 69
Query: 61 DGRVIFVDNVRPSRRYNTDAPLARQLPQSPEE 92
+GR+I++D +P +R P P+ +E
Sbjct: 70 NGRMIYIDIAKPGKRDFQGLPRTSGPPEKSDE 101
>gi|291514454|emb|CBK63664.1| RNA-binding proteins (RRM domain) [Alistipes shahii WAL 8301]
Length = 116
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T+ E L + F QFG+V A +I D+ RS+G+G+V EEE QKA+ +NG
Sbjct: 8 LSWGTSSEGLGNLFMQFGEVASANVITDRETGRSRGFGFVEMPNEEEGQKAIDQLNGTSF 67
Query: 61 DGRVIFVDNVRP 72
+G+ I V+ RP
Sbjct: 68 EGQTITVNVARP 79
>gi|21554348|gb|AAM63455.1| unknown [Arabidopsis thaliana]
Length = 152
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 51/75 (68%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ FST+++ L FS FG++ E +I D+ RSKGY ++ F+++++A A+ M+ ++
Sbjct: 47 LPFSTSEDFLKREFSAFGEIAEVKLIKDEAMQRSKGYAFIQFTSQDDAFLAIETMDRRMY 106
Query: 61 DGRVIFVDNVRPSRR 75
+GR+I++D +P +R
Sbjct: 107 NGRMIYIDIAKPGKR 121
>gi|18415425|ref|NP_567594.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|51971865|dbj|BAD44597.1| putative protein [Arabidopsis thaliana]
gi|107738041|gb|ABF83619.1| At4g20030 [Arabidopsis thaliana]
gi|332658864|gb|AEE84264.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 152
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 51/75 (68%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ FST+++ L FS FG++ E +I D+ RSKGY ++ F+++++A A+ M+ ++
Sbjct: 47 LPFSTSEDFLKREFSAFGEIAEVKLIKDEAMKRSKGYAFIQFTSQDDAFLAIETMDRRMY 106
Query: 61 DGRVIFVDNVRPSRR 75
+GR+I++D +P +R
Sbjct: 107 NGRMIYIDIAKPGKR 121
>gi|351723185|ref|NP_001236758.1| uncharacterized protein LOC100499841 [Glycine max]
gi|255627057|gb|ACU13873.1| unknown [Glycine max]
Length = 143
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ + L DAFS FG V +A +I D+ RS+G+G+V FS +E A AL+ M+GK L
Sbjct: 43 LSYGVDDQSLKDAFSGFGDVVDAKVITDRDSGRSRGFGFVNFSNDESASSALSAMDGKDL 102
Query: 61 DGRVIFVD--NVRPS 73
+GR I V N +PS
Sbjct: 103 NGRSIRVSYANDKPS 117
>gi|30692254|ref|NP_849523.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
gi|332661645|gb|AEE87045.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
Length = 126
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 47/68 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T E L FSQFG V ++ II D+ RS+G+G+VTF E+ + A+ +MNGK L
Sbjct: 13 LAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKEL 72
Query: 61 DGRVIFVD 68
DGRVI V+
Sbjct: 73 DGRVITVN 80
>gi|15235002|ref|NP_195637.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
gi|544425|sp|Q03251.1|GRP8_ARATH RecName: Full=Glycine-rich RNA-binding protein 8; AltName:
Full=Protein CCR1
gi|16305|emb|CAA78712.1| glycine rich protein [Arabidopsis thaliana]
gi|166658|gb|AAA20201.1| ORF [Arabidopsis thaliana]
gi|166839|gb|AAA32854.1| RNA-binding protein [Arabidopsis thaliana]
gi|4914438|emb|CAB43641.1| glycine-rich protein (clone AtGRP8) [Arabidopsis thaliana]
gi|7270909|emb|CAB80589.1| glycine-rich protein (clone AtGRP8) [Arabidopsis thaliana]
gi|222423067|dbj|BAH19515.1| AT4G39260 [Arabidopsis thaliana]
gi|332661644|gb|AEE87044.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
Length = 169
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 47/68 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T E L FSQFG V ++ II D+ RS+G+G+VTF E+ + A+ +MNGK L
Sbjct: 13 LAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKEL 72
Query: 61 DGRVIFVD 68
DGRVI V+
Sbjct: 73 DGRVITVN 80
>gi|218193515|gb|EEC75942.1| hypothetical protein OsI_13038 [Oryza sativa Indica Group]
Length = 261
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T + LADAF +FG+V +A I++++ R +G+G+VTFS E A+ +M+ + L
Sbjct: 14 LSFHTDERKLADAFRRFGKVVDAQIMLERHTQRHRGFGFVTFSDPEAVDSAIKEMHCQEL 73
Query: 61 DGRVIFVDNVRPSRRYNTD 79
DGR I V+ P + NTD
Sbjct: 74 DGRTISVNKAEP--KMNTD 90
>gi|399886791|gb|AFP52931.1| RBP1 [Hordeum vulgare]
Length = 162
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 47/72 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++T L AFS FG++ +A II D+ RS+G+G+V+FS E+ Q A+ MNGK L
Sbjct: 16 LSWNTDDRGLEAAFSSFGEILDAKIINDRETGRSRGFGFVSFSNEQAMQDAIEGMNGKEL 75
Query: 61 DGRVIFVDNVRP 72
DGR I V+ +
Sbjct: 76 DGRSIVVNEAQS 87
>gi|395330687|gb|EJF63070.1| RNA-binding domain-containing protein [Dichomitus squalens LYAD-421
SS1]
Length = 272
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 47/68 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S TT+ L D FS+FG+V + I+ D+ +RS+G+G++T ST EEA + + ++NG L
Sbjct: 82 LSIRTTERDLDDEFSRFGRVEKVVIVYDQRSDRSRGFGFITMSTTEEATRCIKELNGVEL 141
Query: 61 DGRVIFVD 68
+GR I VD
Sbjct: 142 NGRRIRVD 149
>gi|121606987|ref|YP_984316.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans
CJ2]
gi|120595956|gb|ABM39395.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans
CJ2]
Length = 152
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ +S E L +F QFG VT A ++M++ RSKG+G+V +++ EAQ A+ MNG+ L
Sbjct: 10 LPYSVRDEDLQQSFGQFGAVTSAKVMMERDTGRSKGFGFVEMASDAEAQAAINGMNGQPL 69
Query: 61 DGRVIFVDNVRP 72
GR + V+ RP
Sbjct: 70 GGRSVVVNEARP 81
>gi|242823058|ref|XP_002488014.1| glycine-rich RNA-binding protein, putative [Talaromyces
stipitatus ATCC 10500]
gi|218712935|gb|EED12360.1| glycine-rich RNA-binding protein, putative [Talaromyces
stipitatus ATCC 10500]
Length = 134
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ TT + L F +FG + EA +I D+ NRS+G+G+V F+T+ EA A+ MN +
Sbjct: 9 LAWHTTDDTLRQGFEKFGTIEEAIVIKDRDTNRSRGFGFVRFATDAEADAAIDGMNNQEF 68
Query: 61 DGRVIFVD 68
DGRVI VD
Sbjct: 69 DGRVIRVD 76
>gi|356517261|ref|XP_003527307.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Glycine max]
Length = 145
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
T E L + F++FG+V A ++ D+ SKG+G+V ++T E+A K + M+GK LDG V
Sbjct: 60 TNTERLREEFAKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWV 119
Query: 65 IFVDNVRP 72
IF + RP
Sbjct: 120 IFAEYARP 127
>gi|116782406|gb|ABK22494.1| unknown [Picea sitchensis]
Length = 178
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 52/68 (76%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ TT++ L +AFS FG + EATI+MD+ RS+G+ ++ ++ EEEA+ A+ M+GK L
Sbjct: 89 LSYYTTEQSLRNAFSSFGNLVEATIVMDRVTKRSRGFAFLRYAYEEEAEAAIKGMHGKFL 148
Query: 61 DGRVIFVD 68
DGRVIFV+
Sbjct: 149 DGRVIFVE 156
>gi|119589931|gb|EAW69525.1| cold inducible RNA binding protein, isoform CRA_d [Homo sapiens]
Length = 311
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 47/70 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 25 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 84
Query: 61 DGRVIFVDNV 70
DGR I VD
Sbjct: 85 DGRQIRVDQA 94
>gi|217071940|gb|ACJ84330.1| unknown [Medicago truncatula]
Length = 211
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 49/72 (68%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ST+ L D F +FG++TEA +++DK RS+G+G+VT+ ++ + A+ MNG L
Sbjct: 14 LAWSTSDRKLRDTFEKFGKLTEAKVVVDKFSGRSRGFGFVTYDEKKVMEDAIDAMNGIDL 73
Query: 61 DGRVIFVDNVRP 72
DGR I VD +P
Sbjct: 74 DGRTITVDRAQP 85
>gi|195155759|ref|XP_002018768.1| GL25979 [Drosophila persimilis]
gi|194114921|gb|EDW36964.1| GL25979 [Drosophila persimilis]
Length = 289
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 46/78 (58%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F T+EML F FG++ +IMD NRSKGYG++T+ E+A+KAL +NG L
Sbjct: 36 LHFDITEEMLRGIFEPFGKIDAIQLIMDTETNRSKGYGFITYHNAEDAKKALEQLNGFEL 95
Query: 61 DGRVIFVDNVRPSRRYNT 78
GR + V NV NT
Sbjct: 96 AGRPMKVGNVTERLDMNT 113
>gi|390602556|gb|EIN11949.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 161
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 48/68 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++TT E L AFS +GQ+ ++ ++ D+ RS+G+G+VTFS+ EA A+A +N + L
Sbjct: 10 LSWNTTDESLRAAFSHYGQILDSIVMRDRDTGRSRGFGFVTFSSSAEADNAIASLNEQDL 69
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 70 DGRRIRVN 77
>gi|395854422|ref|XP_003799690.1| PREDICTED: putative RNA-binding protein 3 [Otolemur garnettii]
Length = 155
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 48/75 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F+T ++ L D FS FG ++E ++ D+ RS+G+G++TF+ E A A+ MNG+ L
Sbjct: 13 LNFNTDEQALEDHFSTFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESL 72
Query: 61 DGRVIFVDNVRPSRR 75
DGR I VD S R
Sbjct: 73 DGRQIRVDRAGKSAR 87
>gi|319762031|ref|YP_004125968.1| rnp-1 like RNA-binding protein [Alicycliphilus denitrificans BC]
gi|330826150|ref|YP_004389453.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans
K601]
gi|317116592|gb|ADU99080.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans BC]
gi|329311522|gb|AEB85937.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans
K601]
Length = 102
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++S E L FSQFG VT A ++M++ RSKG+G+V ++ EAQ+A+ ++GK +
Sbjct: 10 LAYSVRDESLVQQFSQFGAVTSAKVMMERDTGRSKGFGFVEMASGAEAQEAINGLHGKSV 69
Query: 61 DGRVIFVDNVRP 72
DGR + V+ RP
Sbjct: 70 DGRALTVNVARP 81
>gi|359807285|ref|NP_001240860.1| uncharacterized protein LOC100815224 [Glycine max]
gi|255645181|gb|ACU23088.1| unknown [Glycine max]
Length = 208
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ST+ L D F +FG++ EA +++DK RS+G+G+VTF ++ +A+ MNG L
Sbjct: 14 LAWSTSDRKLKDTFEKFGKLIEAKVVVDKFSGRSRGFGFVTFDDKKAMDEAIDAMNGIDL 73
Query: 61 DGRVIFVDNVRP 72
DGR I VD +P
Sbjct: 74 DGRTITVDRAQP 85
>gi|119589928|gb|EAW69522.1| cold inducible RNA binding protein, isoform CRA_c [Homo sapiens]
gi|119589930|gb|EAW69524.1| cold inducible RNA binding protein, isoform CRA_c [Homo sapiens]
Length = 297
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|189499100|ref|YP_001958570.1| RNP-1 like RNA-binding protein [Chlorobium phaeobacteroides BS1]
gi|189494541|gb|ACE03089.1| RNP-1 like RNA-binding protein [Chlorobium phaeobacteroides BS1]
Length = 90
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 46/66 (69%)
Query: 3 FSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDG 62
+S ++E L+DAF+QFGQV A IIMDK RSKG+G+V ++EAQ A+ ++ L+G
Sbjct: 10 YSLSEEELSDAFAQFGQVDRANIIMDKETGRSKGFGFVEMPNDDEAQNAIDSLHDSDLNG 69
Query: 63 RVIFVD 68
R I V+
Sbjct: 70 RSIKVN 75
>gi|410340767|gb|JAA39330.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
gi|410340769|gb|JAA39331.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
gi|410340771|gb|JAA39332.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
gi|410340773|gb|JAA39333.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
gi|410340775|gb|JAA39334.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
gi|410340777|gb|JAA39335.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
Length = 157
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 48/75 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F+T ++ L D FS FG ++E ++ D+ RS+G+G++TF E A A+ MNG+ L
Sbjct: 13 LNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFPIPEHASVAMRAMNGESL 72
Query: 61 DGRVIFVDNVRPSRR 75
DGR I VD+ S R
Sbjct: 73 DGRQIRVDHAGKSAR 87
>gi|108863012|gb|ABG22105.1| Glycine-rich RNA-binding protein GRP1A, putative, expressed
[Oryza sativa Japonica Group]
Length = 117
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 49/74 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L AFS FG++ E+ II D+ RS+G+G+VTFS+E+ + A+ MNGK L
Sbjct: 15 LAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGKEL 74
Query: 61 DGRVIFVDNVRPSR 74
DGR I V+ + R
Sbjct: 75 DGRNITVNEAQSRR 88
>gi|20975278|dbj|BAB92956.1| cold inducible RNA-binding protein beta [Hyla japonica]
Length = 166
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L F ++GQ++E ++ D+ RS+G+G+VTF E+A+ A+ MNGK +
Sbjct: 14 LSFDTEEQNLEQVFGKYGQISEVVVVKDRETQRSRGFGFVTFENPEDAKDAMEAMNGKSV 73
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 74 DGRQIRVDQAGKS 86
>gi|410343221|gb|JAA40557.1| cold inducible RNA binding protein [Pan troglodytes]
Length = 203
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 47/68 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 44 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 103
Query: 61 DGRVIFVD 68
DGR I VD
Sbjct: 104 DGRQIRVD 111
>gi|91790716|ref|YP_551668.1| RNA recognition motif-containing protein [Polaromonas sp. JS666]
gi|91699941|gb|ABE46770.1| RNA-binding region RNP-1 (RNA recognition motif) [Polaromonas sp.
JS666]
Length = 151
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ +S E L +F QFG VT A ++M++ RSKG+G+V ++ EAQ A+ MNG+ L
Sbjct: 10 LPYSVRDEDLQQSFGQFGSVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAINGMNGQPL 69
Query: 61 DGRVIFVDNVRP 72
GR + V+ RP
Sbjct: 70 GGRSVVVNEARP 81
>gi|395005503|ref|ZP_10389380.1| RRM domain-containing RNA-binding protein, partial [Acidovorax
sp. CF316]
gi|394316556|gb|EJE53277.1| RRM domain-containing RNA-binding protein, partial [Acidovorax
sp. CF316]
Length = 110
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 44/72 (61%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ +S L AF QFG VT A ++M++ RSKG+G+V ++ EAQ A+ MNG+ L
Sbjct: 10 LPYSVRDSDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDPEAQAAINGMNGQPL 69
Query: 61 DGRVIFVDNVRP 72
GR I V+ RP
Sbjct: 70 GGRSIVVNEARP 81
>gi|406873754|gb|EKD23843.1| hypothetical protein ACD_81C00167G0002 [uncultured bacterium]
Length = 111
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 49/72 (68%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ +STT++ L D FSQ G V A II+DK RSKG+G+V ++++EA+KA+ NGK
Sbjct: 10 LPYSTTQDALNDLFSQAGTVESAMIIIDKMTGRSKGFGFVEMASDDEAEKAIDMFNGKDF 69
Query: 61 DGRVIFVDNVRP 72
+GR + V+ RP
Sbjct: 70 EGRSLTVNVARP 81
>gi|326319545|ref|YP_004237217.1| RNP-1 like RNA-binding protein [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323376381|gb|ADX48650.1| RNP-1 like RNA-binding protein [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 172
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 44/72 (61%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ +S L AF QFG VT A ++M++ RSKG+G+V ++ EAQ A+ MNG+ L
Sbjct: 10 LPYSVRDNDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAINGMNGQAL 69
Query: 61 DGRVIFVDNVRP 72
GR I V+ RP
Sbjct: 70 GGRSIVVNEARP 81
>gi|30692256|ref|NP_849524.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
gi|332661646|gb|AEE87046.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
Length = 92
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 47/68 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T E L FSQFG V ++ II D+ RS+G+G+VTF E+ + A+ +MNGK L
Sbjct: 13 LAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKEL 72
Query: 61 DGRVIFVD 68
DGRVI V+
Sbjct: 73 DGRVITVN 80
>gi|387913868|gb|AFK10543.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
Length = 178
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 49/73 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F T ++ L + F+++G V+E +I ++ RSKG G+VTF ++A+ ALA MNGK +
Sbjct: 12 INFETDEQTLEEVFAKYGDVSEVIVIRERDTQRSKGLGFVTFENPDDARDALAGMNGKTV 71
Query: 61 DGRVIFVDNVRPS 73
DGR I VD+ S
Sbjct: 72 DGRQIRVDHAGKS 84
>gi|355755275|gb|EHH59022.1| hypothetical protein EGM_09015 [Macaca fascicularis]
Length = 202
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|311780287|gb|ADQ08684.1| putative glycine-rich RNA-binding protein 1 [Malus hupehensis]
Length = 164
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 48/68 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T E L AFSQ+G++ E+ II D+ RS+G+G+VTF +E+ + A+ MNG+ L
Sbjct: 15 LAWATDNEALERAFSQYGEIIESKIINDRETGRSRGFGFVTFGSEQAMRDAIEGMNGQNL 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRNITVN 82
>gi|296142019|gb|ADG96008.1| putative glycine-rich RNA-binding protein 1 [Malus prunifolia]
Length = 171
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 48/68 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T E L AFSQ+G++ E+ II D+ RS+G+G+VTF +E+ + A+ MNG+ L
Sbjct: 15 LAWATDNEALERAFSQYGEIIESKIINDRETGRSRGFGFVTFGSEQAMRDAIEGMNGQNL 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRNITVN 82
>gi|120613408|ref|YP_973086.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
gi|120591872|gb|ABM35312.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
Length = 176
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 44/72 (61%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ +S L AF QFG VT A ++M++ RSKG+G+V ++ EAQ A+ MNG+ L
Sbjct: 10 LPYSVRDNDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAINGMNGQAL 69
Query: 61 DGRVIFVDNVRP 72
GR I V+ RP
Sbjct: 70 GGRSIVVNEARP 81
>gi|417397313|gb|JAA45690.1| Putative rasgap sh3 binding protein rasputin [Desmodus rotundus]
Length = 218
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|398802241|ref|ZP_10561457.1| RRM domain-containing RNA-binding protein [Polaromonas sp. CF318]
gi|398100710|gb|EJL90943.1| RRM domain-containing RNA-binding protein [Polaromonas sp. CF318]
Length = 148
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ +S E L +F QFG VT A ++M++ RSKG+G+V ++ EAQ A+ MNG+ L
Sbjct: 10 LPYSVRDEDLQQSFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAINGMNGQPL 69
Query: 61 DGRVIFVDNVRP 72
GR + V+ RP
Sbjct: 70 GGRSVVVNEARP 81
>gi|388511713|gb|AFK43918.1| unknown [Lotus japonicus]
Length = 141
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
TT E L + F++FG+V A ++ D+ SKG+G+V ++T EEA K + M+GK LDG V
Sbjct: 55 TTTEKLREEFAKFGEVVHARVVTDRVSGYSKGFGFVKYATIEEASKGIQGMDGKFLDGWV 114
Query: 65 IFVDNVRPS 73
IF + + S
Sbjct: 115 IFAEYAKSS 123
>gi|327290660|ref|XP_003230040.1| PREDICTED: cold-inducible RNA-binding protein-like [Anolis
carolinensis]
Length = 176
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|393245114|gb|EJD52625.1| hypothetical protein AURDEDRAFT_111257 [Auricularia delicata
TFB-10046 SS5]
Length = 103
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++TT E L AF FGQ+ ++ ++ D+ RS+G+G+VTF + +EA A+ +N + L
Sbjct: 10 LSWNTTDETLRSAFQDFGQILDSIVMRDRDTGRSRGFGFVTFGSPQEADSAIQALNDQEL 69
Query: 61 DGRVIFVD--NVRPS 73
DGR I V+ N RPS
Sbjct: 70 DGRRIKVNLANARPS 84
>gi|297804134|ref|XP_002869951.1| hypothetical protein ARALYDRAFT_492869 [Arabidopsis lyrata subsp.
lyrata]
gi|297315787|gb|EFH46210.1| hypothetical protein ARALYDRAFT_492869 [Arabidopsis lyrata subsp.
lyrata]
Length = 152
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 51/75 (68%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ FST+++ L FS FG++ E +I D+ RSKGY ++ F+++++A A+ M+ ++
Sbjct: 47 LPFSTSEDFLKREFSAFGEIAEVKLIRDESMKRSKGYAFIQFTSQDDAFLAIETMDRRMY 106
Query: 61 DGRVIFVDNVRPSRR 75
+GR+I++D +P +R
Sbjct: 107 NGRMIYIDIAKPGKR 121
>gi|159163576|pdb|1X5S|A Chain A, Solution Structure Of Rrm Domain In A18 Hnrnp
Length = 102
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 20 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 79
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 80 DGRQIRVDQAGKS 92
>gi|146328793|ref|YP_001209360.1| RNA recognition motif-containing protein [Dichelobacter nodosus
VCS1703A]
gi|146232263|gb|ABQ13241.1| RNA recognition motif protein [Dichelobacter nodosus VCS1703A]
Length = 95
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 47/72 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ TT++ L +AFSQFG V A+II D+ RSKG+G+V E A+KA+ +N K L
Sbjct: 9 LSYRTTEDELRNAFSQFGDVQNASIIKDRDSGRSKGFGFVEMPDAEAAKKAIESLNDKDL 68
Query: 61 DGRVIFVDNVRP 72
GR + ++ RP
Sbjct: 69 GGRNLKINEARP 80
>gi|90077754|dbj|BAE88557.1| unnamed protein product [Macaca fascicularis]
Length = 172
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|355702927|gb|EHH29418.1| hypothetical protein EGK_09841 [Macaca mulatta]
Length = 202
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|431922216|gb|ELK19307.1| Cold-inducible RNA-binding protein [Pteropus alecto]
Length = 220
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|469070|dbj|BAA03741.1| RNA-binding glycine-rich protein-1a [Nicotiana sylvestris]
gi|295393563|gb|ADG03637.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 156
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++TT + L +AFSQFG++ ++ II D+ RS+G+G+VTF E+ + A+ MNG+ L
Sbjct: 13 LAWATTDQTLGEAFSQFGEILDSKIINDRETGRSRGFGFVTFKDEKAMRDAIEGMNGQDL 72
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 73 DGRNITVN 80
>gi|292490317|ref|YP_003525756.1| RNP-1 like RNA-binding protein [Nitrosococcus halophilus Nc4]
gi|291578912|gb|ADE13369.1| RNP-1 like RNA-binding protein [Nitrosococcus halophilus Nc4]
Length = 97
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 47/72 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T E L AF +G+V+ A +I+DK NRSKG+G+V + +E+A+ A+ +MN L
Sbjct: 8 LSYQVTDEELRAAFENYGEVSSAKVIVDKFSNRSKGFGFVEMARQEDAETAIKEMNDSDL 67
Query: 61 DGRVIFVDNVRP 72
GR I V+ RP
Sbjct: 68 KGRQIVVNQARP 79
>gi|311698159|gb|ADQ00374.1| glycine-rich RNA-binding protein [Sequoia sempervirens]
Length = 194
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 47/72 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L DAFS FG+V E+ I+ D+ RS+G+G+VTFS E+ A+ MNGK L
Sbjct: 15 LAWATDDRSLHDAFSPFGEVLESKIVSDRETGRSRGFGFVTFSDEQAMMDAIEAMNGKEL 74
Query: 61 DGRVIFVDNVRP 72
DGR I V+ +
Sbjct: 75 DGRNITVNQAQS 86
>gi|71897051|ref|NP_001026518.1| cold-inducible RNA-binding protein [Gallus gallus]
gi|53128363|emb|CAG31295.1| hypothetical protein RCJMB04_4m1 [Gallus gallus]
Length = 190
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|115488680|ref|NP_001066827.1| Os12g0502200 [Oryza sativa Japonica Group]
gi|77555842|gb|ABA98638.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113649334|dbj|BAF29846.1| Os12g0502200 [Oryza sativa Japonica Group]
gi|125579440|gb|EAZ20586.1| hypothetical protein OsJ_36195 [Oryza sativa Japonica Group]
gi|215694288|dbj|BAG89281.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215708787|dbj|BAG94056.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 258
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 48/68 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T ++ L D F+ +GQV EA II D+ RS+G+G++T+++ EEA A+ ++GK L
Sbjct: 38 LSYGTDEQSLRDTFANYGQVIEAKIINDRETGRSRGFGFITYASSEEASAAITALDGKDL 97
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 98 DGRNIRVN 105
>gi|73987338|ref|XP_868602.1| PREDICTED: cold-inducible RNA-binding protein isoform 4 [Canis
lupus familiaris]
Length = 219
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 47/70 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 60 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 119
Query: 61 DGRVIFVDNV 70
DGR I VD
Sbjct: 120 DGRQIRVDQA 129
>gi|351730017|ref|ZP_08947708.1| RNP-1 like RNA-binding protein [Acidovorax radicis N35]
Length = 115
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 46/70 (65%)
Query: 3 FSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDG 62
+S T +L FS+FG VT A ++MD+ RSKG+G+V ++ E AQ A++ ++G +DG
Sbjct: 12 YSVTDSVLESNFSEFGNVTSAKVMMDRETGRSKGFGFVEMASAEVAQAAISALHGMSVDG 71
Query: 63 RVIFVDNVRP 72
R I V+ RP
Sbjct: 72 RSIVVNLARP 81
>gi|42567949|ref|NP_197404.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332005259|gb|AED92642.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 172
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S ++ L FS+FGQVT II ++ +S GYGYV F+++E+AQ A+ MNGK DGR
Sbjct: 87 SVSEGRLKKVFSEFGQVTNVKIIANERTRQSLGYGYVWFNSKEDAQSAVEAMNGKFFDGR 146
Query: 64 VIFVDNVRP--SRR 75
I V +P SRR
Sbjct: 147 FILVKFGQPGLSRR 160
>gi|345313668|ref|XP_001512332.2| PREDICTED: cold-inducible RNA-binding protein-like
[Ornithorhynchus anatinus]
Length = 270
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|224286824|gb|ACN41115.1| unknown [Picea sitchensis]
Length = 149
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 45/68 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S TT E L FS+FGQ+ EA ++ D+ RS+G+G+V ++T E+A K M+GK L
Sbjct: 51 LSRQTTDEGLRAKFSEFGQLVEARVVTDRISGRSRGFGFVRYATLEDAAKGKEGMDGKFL 110
Query: 61 DGRVIFVD 68
DG VIF D
Sbjct: 111 DGWVIFAD 118
>gi|355704773|gb|EHH30698.1| RNA-binding motif protein 3 [Macaca mulatta]
Length = 157
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F+T ++ L D FS FG ++E ++ D+ RS+G+G++TF+ E A A+ MNG+ L
Sbjct: 13 LNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRAMNGESL 72
Query: 61 DGRVIFVDNVRPSRR 75
DGR I V +V S R
Sbjct: 73 DGRQIRVAHVGKSAR 87
>gi|432101154|gb|ELK29438.1| Cold-inducible RNA-binding protein [Myotis davidii]
Length = 204
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|47271546|ref|NP_112409.2| cold-inducible RNA-binding protein [Rattus norvegicus]
gi|46623308|gb|AAH69219.1| Cold inducible RNA binding protein [Rattus norvegicus]
Length = 172
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|119589927|gb|EAW69521.1| cold inducible RNA binding protein, isoform CRA_b [Homo sapiens]
Length = 184
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 25 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 84
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 85 DGRQIRVDQAGKS 97
>gi|347819854|ref|ZP_08873288.1| RNP-1 like RNA-binding protein [Verminephrobacter aporrectodeae
subsp. tuberculatae At4]
Length = 168
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 41/63 (65%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFVDN 69
L AF QFG VT A ++M++ RSKG+G+V ++ EAQ A+ MNG+ L GR I V+
Sbjct: 19 LEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAITGMNGQPLGGRSIVVNE 78
Query: 70 VRP 72
RP
Sbjct: 79 ARP 81
>gi|299531903|ref|ZP_07045303.1| RNA-binding protein RNP-3 [Comamonas testosteroni S44]
gi|298720078|gb|EFI61035.1| RNA-binding protein RNP-3 [Comamonas testosteroni S44]
Length = 162
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFVDN 69
L AFSQFG V A ++M++ RSKG+G+V ++E EAQ A+ MNG+ L GR + V+
Sbjct: 19 LEQAFSQFGAVASARVMMERDTGRSKGFGFVEMASEAEAQAAIQGMNGQPLGGRSLVVNE 78
Query: 70 VRP 72
RP
Sbjct: 79 ARP 81
>gi|264680852|ref|YP_003280762.1| RNA-binding protein RNP-3 [Comamonas testosteroni CNB-2]
gi|262211368|gb|ACY35466.1| RNA-binding protein RNP-3 [Comamonas testosteroni CNB-2]
Length = 164
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFVDN 69
L AFSQFG V A ++M++ RSKG+G+V ++E EAQ A+ MNG+ L GR + V+
Sbjct: 19 LEQAFSQFGAVASARVMMERDTGRSKGFGFVEMASEAEAQAAIQGMNGQPLGGRSLVVNE 78
Query: 70 VRP 72
RP
Sbjct: 79 ARP 81
>gi|294461052|gb|ADE76094.1| unknown [Picea sitchensis]
Length = 150
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 54/83 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T +++L DAFS +G++ E +I+++ SKG+G+V F++E +A AL +M+G+ L
Sbjct: 42 LSFDTNEKVLRDAFSLYGEILEVRVIINRASGLSKGFGFVQFASETDAVNALKEMDGQSL 101
Query: 61 DGRVIFVDNVRPSRRYNTDAPLA 83
DGR I V+ R ++ P A
Sbjct: 102 DGRNIRVNFANTRARQDSAPPKA 124
>gi|197128630|gb|ACH45128.1| putative cold inducible RNA binding protein variant 2c
[Taeniopygia guttata]
Length = 175
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|90076360|dbj|BAE87860.1| unnamed protein product [Macaca fascicularis]
Length = 207
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|117619969|ref|YP_856326.1| RNA-binding protein [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
gi|117561376|gb|ABK38324.1| RNA-binding protein [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
Length = 95
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 6/88 (6%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T + L FSQFGQV + II+D+ +SKG+G++ EA+KA+A ++G +
Sbjct: 11 LSYRMTADELTTVFSQFGQVDKVDIIIDRDTGQSKGFGFIEMPVNGEAEKAIAGLHGTEI 70
Query: 61 DGRVIFVDNVRPSRRYNTDAPLARQLPQ 88
GR I V+ +P TDAP R PQ
Sbjct: 71 GGRTITVNQAKP----KTDAPRGR--PQ 92
>gi|544426|sp|Q03878.1|GRP1_DAUCA RecName: Full=Glycine-rich RNA-binding protein
gi|18347|emb|CAA41152.1| glycine-rich protein [Daucus carota]
gi|445138|prf||1908438A Gly-rich protein
Length = 157
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 48/72 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T E L AFSQFG +T++ II D+ RS+G+G+VTF E+ + A+ MNG+ L
Sbjct: 13 LAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEGMNGQEL 72
Query: 61 DGRVIFVDNVRP 72
DGR I V+ +
Sbjct: 73 DGRNITVNEAQS 84
>gi|418528344|ref|ZP_13094294.1| RNA-binding protein RNP-3 [Comamonas testosteroni ATCC 11996]
gi|371454720|gb|EHN67722.1| RNA-binding protein RNP-3 [Comamonas testosteroni ATCC 11996]
Length = 163
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFVDN 69
L AFSQFG V A ++M++ RSKG+G+V ++E EAQ A+ MNG+ L GR + V+
Sbjct: 19 LEQAFSQFGAVASARVMMERDTGRSKGFGFVEMASEAEAQAAIQGMNGQPLGGRSLVVNE 78
Query: 70 VRP 72
RP
Sbjct: 79 ARP 81
>gi|241766569|ref|ZP_04764426.1| RNP-1 like RNA-binding protein [Acidovorax delafieldii 2AN]
gi|241363173|gb|EER58764.1| RNP-1 like RNA-binding protein [Acidovorax delafieldii 2AN]
Length = 116
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 44/72 (61%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ +S L AF QFG VT A ++M++ RSKG+G+V ++ EAQ A+ MNG+ L
Sbjct: 10 LPYSVRDSDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAINGMNGQPL 69
Query: 61 DGRVIFVDNVRP 72
GR I V+ RP
Sbjct: 70 GGRSIVVNEARP 81
>gi|403215569|emb|CCK70068.1| hypothetical protein KNAG_0D03220 [Kazachstania naganishii CBS
8797]
Length = 399
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 44/68 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+S E L + F+ G V A +IM++G +RS+GYGYV F A+KAL +M GK +
Sbjct: 156 LSWSVDDEWLKNEFAPIGGVVSARVIMERGTDRSRGYGYVDFEDISYAEKALKEMQGKEI 215
Query: 61 DGRVIFVD 68
DGR I VD
Sbjct: 216 DGRPINVD 223
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF ++ L + F +FG++ I + KG+GYV ++ E+A+KAL + G+ +
Sbjct: 257 LSFDADRDNLYEIFGKFGEIISVRIPTHPETEQPKGFGYVQYTNTEDAKKALDALQGESI 316
Query: 61 DGRVIFVDNVRP 72
+ R + +D P
Sbjct: 317 NDRPVRLDFSTP 328
>gi|350538255|ref|NP_001232562.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
gi|197128621|gb|ACH45119.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
Length = 171
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|197128619|gb|ACH45117.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
gi|197128620|gb|ACH45118.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
gi|197128623|gb|ACH45121.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
gi|197128625|gb|ACH45123.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
gi|197128627|gb|ACH45125.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
gi|197128628|gb|ACH45126.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
Length = 171
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|1934994|emb|CAA73034.1| SGRP-1 [Solanum commersonii]
Length = 162
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 50/72 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++TT L+DAFS +G+V ++ II D+ RS+G+G+VTF E+ ++A++ MNG L
Sbjct: 14 LAWATTDRTLSDAFSTYGEVVDSKIINDRETGRSRGFGFVTFKDEKSMKEAISGMNGSEL 73
Query: 61 DGRVIFVDNVRP 72
DGR I V+ +
Sbjct: 74 DGRNITVNEAQA 85
>gi|417408518|gb|JAA50808.1| Putative rna-binding protein seb4 rrm superfamily, partial
[Desmodus rotundus]
Length = 193
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 34 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 93
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 94 DGRQIRVDQAGKS 106
>gi|387914322|gb|AFK10770.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
gi|392876160|gb|AFM86912.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
Length = 133
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 47/68 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SFST ++ L + FS++GQ++E +I D+ S+G+G++TF +A+ AL MNGK +
Sbjct: 12 LSFSTDEQSLEEVFSEYGQISEVRVIKDRDTQLSRGFGFITFENPGDAKDALLAMNGKSI 71
Query: 61 DGRVIFVD 68
DGR I VD
Sbjct: 72 DGRQIRVD 79
>gi|20975276|dbj|BAB92955.1| cold inducible RNA-binding protein alpha [Hyla japonica]
Length = 162
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L F ++GQ++E ++ D+ RS+G+G+VTF E+A+ A+ MNGK +
Sbjct: 14 LSFDTEEQSLEQVFGKYGQISEVVVVKDRETKRSRGFGFVTFENPEDAKDAMEAMNGKSV 73
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 74 DGRQIRVDQAGKS 86
>gi|402903547|ref|XP_003914625.1| PREDICTED: cold-inducible RNA-binding protein [Papio anubis]
Length = 199
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 40 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 99
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 100 DGRQIRVDQAGKS 112
>gi|197128626|gb|ACH45124.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
Length = 171
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|118489085|gb|ABK96349.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 171
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 51/72 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++TT ++L +AFSQ+G++ ++ II D+ RS+G+G+VTF E+ + A+ MNG+ L
Sbjct: 14 LAWATTDQVLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFGNEKAMRDAIDGMNGQDL 73
Query: 61 DGRVIFVDNVRP 72
DGR I V+ +
Sbjct: 74 DGRNITVNEAQS 85
>gi|118481677|gb|ABK92779.1| unknown [Populus trichocarpa]
gi|118481702|gb|ABK92791.1| unknown [Populus trichocarpa]
gi|118482754|gb|ABK93295.1| unknown [Populus trichocarpa]
gi|118483202|gb|ABK93505.1| unknown [Populus trichocarpa]
Length = 170
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 51/72 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++TT ++L +AFSQ+G++ ++ II D+ RS+G+G+VTF E+ + A+ MNG+ L
Sbjct: 14 LAWATTDQVLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFGNEKAMRDAIDGMNGQDL 73
Query: 61 DGRVIFVDNVRP 72
DGR I V+ +
Sbjct: 74 DGRNITVNEAQS 85
>gi|30585341|gb|AAP36943.1| Homo sapiens cold inducible RNA binding protein [synthetic
construct]
gi|61371531|gb|AAX43684.1| cold inducible RNA binding protein [synthetic construct]
gi|61371536|gb|AAX43685.1| cold inducible RNA binding protein [synthetic construct]
Length = 173
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|423196273|ref|ZP_17182856.1| hypothetical protein HMPREF1171_00888 [Aeromonas hydrophila SSU]
gi|404632497|gb|EKB29102.1| hypothetical protein HMPREF1171_00888 [Aeromonas hydrophila SSU]
Length = 92
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 6/88 (6%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T + L FSQFGQV + II+D+ +SKG+G++ EA+KA+A ++G +
Sbjct: 8 LSYRMTADELKTVFSQFGQVDKVDIIIDRDTGQSKGFGFIEMPVNGEAEKAIAGLHGTEI 67
Query: 61 DGRVIFVDNVRPSRRYNTDAPLARQLPQ 88
GR I V+ +P TDAP R PQ
Sbjct: 68 GGRTITVNQAKP----KTDAPRGR--PQ 89
>gi|403308137|ref|XP_003944528.1| PREDICTED: cold-inducible RNA-binding protein isoform 1 [Saimiri
boliviensis boliviensis]
gi|403308139|ref|XP_003944529.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Saimiri
boliviensis boliviensis]
Length = 172
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|284022113|sp|Q925G0.2|RBM3_RAT RecName: Full=Putative RNA-binding protein 3; AltName:
Full=RNA-binding motif protein 3
Length = 155
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F+T ++ L D FS FG ++E ++ D+ RS+G+G++TF+ E A + MNG+ L
Sbjct: 13 LNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDVMRAMNGESL 72
Query: 61 DGRVIFVDNVRPSRR 75
DGR I VD+ S R
Sbjct: 73 DGRQIRVDHAGKSAR 87
>gi|441656594|ref|XP_003277032.2| PREDICTED: cold-inducible RNA-binding protein [Nomascus
leucogenys]
Length = 144
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|77735511|ref|NP_001029450.1| cold-inducible RNA-binding protein [Bos taurus]
gi|74353851|gb|AAI02774.1| Cold inducible RNA binding protein [Bos taurus]
gi|296485364|tpg|DAA27479.1| TPA: cold inducible RNA binding protein [Bos taurus]
Length = 213
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|297812083|ref|XP_002873925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319762|gb|EFH50184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 167
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S ++ L FS+FGQVT II+++ +S GYGYV F+ +E+AQ A+ MNGK DGR
Sbjct: 85 SVSEGRLKKVFSEFGQVTNVKIIINERTRQSLGYGYVWFNRKEDAQLAVEAMNGKFFDGR 144
Query: 64 VIFVDNVRP--SRR 75
I V +P SRR
Sbjct: 145 FILVKFGQPGLSRR 158
>gi|255573326|ref|XP_002527590.1| conserved hypothetical protein [Ricinus communis]
gi|223533029|gb|EEF34792.1| conserved hypothetical protein [Ricinus communis]
Length = 66
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 44/59 (74%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKL 59
+SF TT+E L +AF FG++ E ++MDK NR +G+ ++ ++TEEE+QKA+ M+GK+
Sbjct: 7 ISFRTTEESLRNAFQNFGKLVEVNLVMDKIANRPRGFAFLRYATEEESQKAIEGMHGKV 65
>gi|6680946|ref|NP_031731.1| cold-inducible RNA-binding protein [Mus musculus]
gi|346644681|ref|NP_001231002.1| cold-inducible RNA-binding protein [Cricetulus griseus]
gi|46395643|sp|P60826.1|CIRBP_CRIGR RecName: Full=Cold-inducible RNA-binding protein; AltName:
Full=A18 hnRNP; AltName: Full=Glycine-rich RNA-binding
protein CIRP
gi|46397383|sp|P60825.1|CIRBP_RAT RecName: Full=Cold-inducible RNA-binding protein; AltName:
Full=A18 hnRNP; AltName: Full=Glycine-rich RNA-binding
protein CIRP
gi|46397384|sp|P60824.1|CIRBP_MOUSE RecName: Full=Cold-inducible RNA-binding protein; AltName:
Full=A18 hnRNP; AltName: Full=Glycine-rich RNA-binding
protein CIRP
gi|1060919|dbj|BAA11213.1| CIRP [Mus musculus]
gi|1783168|dbj|BAA19092.1| CIRP [Rattus norvegicus]
gi|12852647|dbj|BAB29491.1| unnamed protein product [Mus musculus]
gi|34099624|gb|AAQ57122.1| cold-inducible RNA binding protein [Cricetulus griseus]
gi|49522692|gb|AAH75699.1| Cold inducible RNA binding protein [Mus musculus]
gi|74209036|dbj|BAE21245.1| unnamed protein product [Mus musculus]
gi|115345819|gb|ABI95367.1| cold-inducible RNA-binding protein [Cricetulus griseus]
gi|148699640|gb|EDL31587.1| cold inducible RNA binding protein, isoform CRA_c [Mus musculus]
gi|149034580|gb|EDL89317.1| cold inducible RNA binding protein, isoform CRA_c [Rattus
norvegicus]
gi|149034581|gb|EDL89318.1| cold inducible RNA binding protein, isoform CRA_c [Rattus
norvegicus]
Length = 172
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|296232406|ref|XP_002761576.1| PREDICTED: cold-inducible RNA-binding protein [Callithrix
jacchus]
Length = 172
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|296422065|ref|XP_002840583.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636802|emb|CAZ84774.1| unnamed protein product [Tuber melanosporum]
Length = 559
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 45/68 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++ + L + F QFG++ ++ D+ RSKG+GYV ++T E A+KAL +M GK +
Sbjct: 309 LSWNVDEGWLRNEFEQFGEIAAVRVVTDRESGRSKGFGYVEYTTNEAAKKALEEMKGKDI 368
Query: 61 DGRVIFVD 68
DGR I VD
Sbjct: 369 DGRTINVD 376
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF ++++ F FG + I D + KG+ Y+ + + A+KA+ +MNG L+
Sbjct: 409 LSFEADEQIVQTEFEGFGNIVGLRIPTDPESGQPKGFCYIQYDRVDSARKAVEEMNGALV 468
Query: 61 DGRVIFVD 68
GR I D
Sbjct: 469 AGRAIRTD 476
>gi|71668509|gb|AAZ38826.1| aggrecan promoter binding protein [Gallus gallus]
Length = 172
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|161408091|dbj|BAF94149.1| cold-inducible RNA binding protein [Alligator mississippiensis]
Length = 165
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|4502847|ref|NP_001271.1| cold-inducible RNA-binding protein [Homo sapiens]
gi|197102572|ref|NP_001124692.1| cold-inducible RNA-binding protein [Pongo abelii]
gi|386782231|ref|NP_001248245.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|397465267|ref|XP_003804430.1| PREDICTED: cold-inducible RNA-binding protein [Pan paniscus]
gi|426386441|ref|XP_004059693.1| PREDICTED: cold-inducible RNA-binding protein isoform 1 [Gorilla
gorilla gorilla]
gi|5921786|sp|Q14011.1|CIRBP_HUMAN RecName: Full=Cold-inducible RNA-binding protein; AltName:
Full=A18 hnRNP; AltName: Full=Glycine-rich RNA-binding
protein CIRP
gi|75070980|sp|Q5RF83.1|CIRBP_PONAB RecName: Full=Cold-inducible RNA-binding protein; AltName:
Full=Glycine-rich RNA-binding protein CIRP
gi|1060893|dbj|BAA11212.1| CIRP [Homo sapiens]
gi|2541973|gb|AAC51787.1| DNA damage-inducible RNA binding protein [Homo sapiens]
gi|2924760|gb|AAC04895.1| CIRP [Homo sapiens]
gi|12653269|gb|AAH00403.1| Cold inducible RNA binding protein [Homo sapiens]
gi|12654167|gb|AAH00901.1| Cold inducible RNA binding protein [Homo sapiens]
gi|30583259|gb|AAP35874.1| cold inducible RNA binding protein [Homo sapiens]
gi|55725420|emb|CAH89574.1| hypothetical protein [Pongo abelii]
gi|60654971|gb|AAX32049.1| cold inducible RNA binding protein [synthetic construct]
gi|67970531|dbj|BAE01608.1| unnamed protein product [Macaca fascicularis]
gi|119589926|gb|EAW69520.1| cold inducible RNA binding protein, isoform CRA_a [Homo sapiens]
gi|119589929|gb|EAW69523.1| cold inducible RNA binding protein, isoform CRA_a [Homo sapiens]
gi|157928054|gb|ABW03323.1| cold inducible RNA binding protein [synthetic construct]
gi|157928769|gb|ABW03670.1| cold inducible RNA binding protein [synthetic construct]
gi|197692151|dbj|BAG70039.1| cold inducible RNA binding protein [Homo sapiens]
gi|197692397|dbj|BAG70162.1| cold inducible RNA binding protein [Homo sapiens]
gi|261860266|dbj|BAI46655.1| cold inducible RNA binding protein [synthetic construct]
gi|343958578|dbj|BAK63144.1| cold-inducible RNA-binding protein [Pan troglodytes]
gi|383415637|gb|AFH31032.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|384940732|gb|AFI33971.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|410224774|gb|JAA09606.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410260066|gb|JAA17999.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410289136|gb|JAA23168.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343217|gb|JAA40555.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343219|gb|JAA40556.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343223|gb|JAA40558.1| cold inducible RNA binding protein [Pan troglodytes]
Length = 172
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|421976742|gb|AFX73254.1| glycine rich RNA binding protein 1a [Solanum lycopersicum]
Length = 164
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 50/72 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++TT L+DAFS +G+V ++ II D+ RS+G+G+VTF E+ + A++ MNG+ L
Sbjct: 14 LAWATTDRTLSDAFSTYGEVVDSKIINDRETGRSRGFGFVTFKDEKSMKDAISGMNGQEL 73
Query: 61 DGRVIFVDNVRP 72
DGR I V+ +
Sbjct: 74 DGRNITVNEAQA 85
>gi|258568356|ref|XP_002584922.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237906368|gb|EEP80769.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 745
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S T E L + FSQ + AT + D + KGYG+VTF+ E+AQ+AL ++NG + DGR
Sbjct: 56 SATTESLTEYFSQSYPIKHATAVADPQTKQCKGYGFVTFTDVEDAQRALEELNGSIFDGR 115
Query: 64 VIFVDNVRPSRRYNTDAPLARQLPQS 89
I ++ P RR D + + +P +
Sbjct: 116 KIVIEVAEP-RRREIDEKVGKSVPSA 140
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E LA F +G+V A I KG R G+G++ ++ A+KA+ +NGK LDGR + V
Sbjct: 174 EQLAVLFRSYGKVKHADIPR-KG-TRHSGFGFIVMRGKKNAEKAIEGVNGKELDGRTLAV 231
Query: 68 D 68
D
Sbjct: 232 D 232
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 3 FSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKAL 52
F T E L + F+QFG V A +++D +R +G +V F E++A+ +
Sbjct: 331 FGATDETLGEHFAQFGAVRYARVVVDPETDRPRGTAFVCFWKEDDAKACI 380
>gi|125536731|gb|EAY83219.1| hypothetical protein OsI_38428 [Oryza sativa Indica Group]
Length = 257
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 48/68 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T ++ L D F+ +GQV EA II D+ RS+G+G++T+++ EEA A+ ++GK L
Sbjct: 38 LSYGTDEQSLRDTFANYGQVIEAKIINDRETGRSRGFGFITYASSEEASAAITALDGKDL 97
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 98 DGRNIRVN 105
>gi|449273022|gb|EMC82651.1| Cold-inducible RNA-binding protein [Columba livia]
Length = 153
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|344243389|gb|EGV99492.1| Cold-inducible RNA-binding protein [Cricetulus griseus]
Length = 184
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|297739973|emb|CBI30155.3| unnamed protein product [Vitis vinifera]
Length = 190
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 51/72 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ ++T++ L DAFS++G++ E+ ++M++ R +G+G++TF+ + A+ +M+G+ L
Sbjct: 14 LGWNTSERHLEDAFSRYGKILESLVMMERDTGRPRGFGFITFADHRAMEDAIREMHGREL 73
Query: 61 DGRVIFVDNVRP 72
DGRVI V+ +P
Sbjct: 74 DGRVISVNKAQP 85
>gi|224128992|ref|XP_002328863.1| predicted protein [Populus trichocarpa]
gi|118482403|gb|ABK93124.1| unknown [Populus trichocarpa]
gi|222839293|gb|EEE77630.1| predicted protein [Populus trichocarpa]
Length = 131
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 55/82 (67%), Gaps = 3/82 (3%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ST + L DAFS FG+VTEA +I D+ RS+G+G+V++ + E A +AL+ M+G+ L
Sbjct: 43 LAWSTDDQSLKDAFSGFGEVTEARVITDRDTGRSRGFGFVSYESTESASEALSAMDGQEL 102
Query: 61 DGRVI---FVDNVRPSRRYNTD 79
GR I + + R + YN++
Sbjct: 103 GGRNIRVGYATDKRQPQPYNSN 124
>gi|162455692|ref|YP_001618059.1| RNA recognition motif-containing protein [Sorangium cellulosum So
ce56]
gi|161166274|emb|CAN97579.1| RNA-binding region RNP-1 (RNA recognition motif) [Sorangium
cellulosum So ce56]
Length = 139
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 47/66 (71%)
Query: 3 FSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDG 62
FS TK + AF+Q G+VT+ I+ D+ +S+G+G+VT T E+AQ+A+ +MNG ++DG
Sbjct: 12 FSATKASVQAAFAQSGEVTDVHIVTDRESGQSRGFGFVTMGTPEQAQQAIENMNGAMMDG 71
Query: 63 RVIFVD 68
R + V+
Sbjct: 72 RPLRVN 77
>gi|197632397|gb|ACH70922.1| elongation factor-1 delta-1 [Salmo salar]
Length = 203
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 47/68 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F T + L +AFS++G + + ++ D+ RS+G+G+VTF E+A+ A+A MNGK +
Sbjct: 12 LCFDTDETSLEEAFSKYGNIAKVDVVRDRETQRSRGFGFVTFENPEDAKDAMAAMNGKSV 71
Query: 61 DGRVIFVD 68
DGR+I VD
Sbjct: 72 DGRMIRVD 79
>gi|2331133|gb|AAB66885.1| glycine-rich protein [Oryza sativa Japonica Group]
Length = 161
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 49/74 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L AFS +G++ E+ II D+ RS+G+G+VTFS+E+ + A+ MNGK L
Sbjct: 15 LAWATDNRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGKEL 74
Query: 61 DGRVIFVDNVRPSR 74
DGR I V+ + R
Sbjct: 75 DGRNITVNEAQSRR 88
>gi|426229493|ref|XP_004008825.1| PREDICTED: cold-inducible RNA-binding protein [Ovis aries]
Length = 171
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|387018172|gb|AFJ51204.1| Cold-inducible RNA-binding protein-like [Crotalus adamanteus]
Length = 172
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|395831301|ref|XP_003788741.1| PREDICTED: cold-inducible RNA-binding protein [Otolemur
garnettii]
Length = 172
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|2267567|gb|AAB63581.1| glycine-rich RNA binding protein 1 [Pelargonium x hortorum]
gi|2267569|gb|AAB63582.1| glycine-rich RNA binding protein 2 [Pelargonium x hortorum]
Length = 166
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L AFSQ+G+V E+ II D+ RS+G+G+VTFS E+ A+ MNG+ L
Sbjct: 15 LAWATDDHALEQAFSQYGEVVESKIINDRETGRSRGFGFVTFSNEKSMNDAIEGMNGQNL 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRNITVN 82
>gi|148699639|gb|EDL31586.1| cold inducible RNA binding protein, isoform CRA_b [Mus musculus]
Length = 176
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|154416377|ref|XP_001581211.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121915436|gb|EAY20225.1| hypothetical protein TVAG_021720 [Trichomonas vaginalis G3]
Length = 202
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF TT+E L FS+FG V + I + +SKG+G++ ++T+EEA KA+A+MN K
Sbjct: 52 LSFETTEESLKIKFSEFGNVISSRIPVRAQSGKSKGFGFIEYATQEEADKAIAEMNKKEF 111
Query: 61 DGRVIFVD 68
+GR I VD
Sbjct: 112 EGRTIVVD 119
>gi|301776322|ref|XP_002923559.1| PREDICTED: cold-inducible RNA-binding protein-like [Ailuropoda
melanoleuca]
Length = 172
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|333917516|ref|YP_004491248.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
gi|333747716|gb|AEF92893.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
Length = 179
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFVDN 69
L AFSQFG VT A ++M++ RSKG+G+V ++ EAQ A+ MNG+ L GR + V+
Sbjct: 19 LEQAFSQFGAVTSARVMMERDTGRSKGFGFVEMGSDAEAQAAVQGMNGQPLGGRSLVVNE 78
Query: 70 VRP 72
RP
Sbjct: 79 ARP 81
>gi|302818104|ref|XP_002990726.1| hypothetical protein SELMODRAFT_185536 [Selaginella moellendorffii]
gi|300141464|gb|EFJ08175.1| hypothetical protein SELMODRAFT_185536 [Selaginella moellendorffii]
Length = 738
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 45/67 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T++E L F Q+G+V + +I DK NRSKGYGYV F EEA +A+ +++ +
Sbjct: 232 LAYTTSEEELVSLFGQYGEVVQVHVICDKETNRSKGYGYVGFMLPEEATRAMTELDNSIF 291
Query: 61 DGRVIFV 67
GR++ V
Sbjct: 292 QGRLLHV 298
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 10/95 (10%)
Query: 6 TKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLD---- 61
T + L + F GQVT+A ++ + + +S+ +G+V F ++EEA+ A+A N LD
Sbjct: 17 TDDKLKEHFGAKGQVTDAKVMRTR-EGKSRRFGFVGFYSQEEAESAVAYFNRSFLDTSRL 75
Query: 62 ----GRVIFVDNVRPSRRYNTDAPLARQLPQSPEE 92
R + VRP R++ + A + +PEE
Sbjct: 76 VCEVARSVGDAAVRPWSRHSKGSS-AYEKTHAPEE 109
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
V+F T++ L FS FGQV + + K +G+ +V F T++EAQ A + L
Sbjct: 641 VAFEATRKDLKLLFSPFGQVKKVKL-PKKFDGNHRGFAFVEFVTKQEAQNAFEALGSSHL 699
Query: 61 DGRVIFVDNVR 71
GR + ++ R
Sbjct: 700 YGRHLVLEWAR 710
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 9/87 (10%)
Query: 1 VSFSTTKEMLADAFS---QFGQVTEATIIMD---KGKNRSKGYGYVTFSTEEEAQKALAD 54
++F TT L F + G + AT+ G + S G+G+V F + + A++ +
Sbjct: 541 LNFKTTDASLRKHFEGRVKAGSLRTATVKRKPSKTGASLSMGFGFVEFDSTDTAERVCKE 600
Query: 55 MNGKLLDGRVIFVDNVRPSRRYNTDAP 81
M G +LDG + ++PSR + + P
Sbjct: 601 MQGSVLDGHALV---LQPSRAGDDEKP 624
>gi|160901478|ref|YP_001567060.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
gi|160367062|gb|ABX38675.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
Length = 176
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFVDN 69
L AFSQFG VT A ++M++ RSKG+G+V ++ EAQ A+ MNG+ L GR + V+
Sbjct: 19 LEQAFSQFGAVTSARVMMERDTGRSKGFGFVEMGSDAEAQAAVQGMNGQPLGGRSLVVNE 78
Query: 70 VRP 72
RP
Sbjct: 79 ARP 81
>gi|326918654|ref|XP_003205603.1| PREDICTED: LOW QUALITY PROTEIN: cold-inducible RNA-binding
protein-like [Meleagris gallopavo]
Length = 170
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|196234692|ref|ZP_03133505.1| RNP-1 like RNA-binding protein [Chthoniobacter flavus Ellin428]
gi|196221240|gb|EDY15797.1| RNP-1 like RNA-binding protein [Chthoniobacter flavus Ellin428]
Length = 126
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF TT+ L DAF++ G V E ++ DK RS+G+ +VT +T +EAQKA++ +GK L
Sbjct: 10 LSFDTTEVDLQDAFAEAGTVQEVALMQDKFTGRSRGFAFVTMATPDEAQKAISIFHGKTL 69
Query: 61 DGRVIFVDNVRP 72
GR + V+ RP
Sbjct: 70 QGRPLTVNEARP 81
>gi|624925|dbj|BAA05170.1| RNA-binding glycine rich protein [Nicotiana sylvestris]
gi|295393567|gb|ADG03639.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 259
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 48/68 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T + L +AFSQ G+V EA +IMD+ RS+G+G+V+F++ EEA AL ++G+ L
Sbjct: 47 LSWGTDETSLKEAFSQHGEVIEARVIMDRDTGRSRGFGFVSFTSTEEAASALTALDGQDL 106
Query: 61 DGRVIFVD 68
GR I V+
Sbjct: 107 HGRQIRVN 114
>gi|357119387|ref|XP_003561423.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 161
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 48/68 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L DAFS FG++ ++ II D+ RS+G+G+VTF++E+ + A+ MNGK L
Sbjct: 13 LAWATDDRGLQDAFSSFGEIIDSKIINDRETGRSRGFGFVTFASEQSMRDAIEGMNGKDL 72
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 73 DGRNITVN 80
>gi|91202563|emb|CAJ72202.1| rna binding protein [Candidatus Kuenenia stuttgartiensis]
Length = 126
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 43/68 (63%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
TT+E L F +FGQVT TII DK S+G+G+V + EAQ AL +NGK L+GRV
Sbjct: 12 TTEEELKQVFEEFGQVTSVTIIKDKFSGESRGFGFVEMPSRAEAQAALDSLNGKDLNGRV 71
Query: 65 IFVDNVRP 72
+ V+ P
Sbjct: 72 LNVNEALP 79
>gi|406911424|gb|EKD51218.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 125
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ +S L FG+V A +I DK RSKG+G+V + +EEAQKA+ D+N K +
Sbjct: 10 LPYSVDDAQLESMAVAFGEVVSAQVIQDKFNGRSKGFGFVEMANDEEAQKAIDDLNNKEI 69
Query: 61 DGRVIFVDNVRPSRRYNTD 79
DGR I V+ RP + + D
Sbjct: 70 DGRKIIVNEARPMEKRDGD 88
>gi|351731832|ref|ZP_08949523.1| RNP-1 like RNA-binding protein [Acidovorax radicis N35]
Length = 177
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ +S L AF QFG VT A ++M++ RSKG+G+V + EAQ A+ MNG+ L
Sbjct: 10 LPYSVRDSDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGNDAEAQAAINGMNGQPL 69
Query: 61 DGRVIFVDNVRP 72
GR I V+ RP
Sbjct: 70 GGRSIVVNEARP 81
>gi|193215305|ref|YP_001996504.1| RNP-1 like RNA-binding protein [Chloroherpeton thalassium ATCC
35110]
gi|193088782|gb|ACF14057.1| RNP-1 like RNA-binding protein [Chloroherpeton thalassium ATCC
35110]
Length = 104
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 48/72 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++ T+ L D FS++G+V A II+DK +S+G+G+V E +A++A+ +NG L
Sbjct: 8 LSYTLTENELRDVFSEYGEVASANIIVDKYSGKSRGFGFVDMPNEADAEQAIEALNGSQL 67
Query: 61 DGRVIFVDNVRP 72
DGR + V+ RP
Sbjct: 68 DGRSLKVNEARP 79
>gi|148699638|gb|EDL31585.1| cold inducible RNA binding protein, isoform CRA_a [Mus musculus]
gi|149034578|gb|EDL89315.1| cold inducible RNA binding protein, isoform CRA_b [Rattus
norvegicus]
gi|149034579|gb|EDL89316.1| cold inducible RNA binding protein, isoform CRA_b [Rattus
norvegicus]
Length = 168
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|209154454|gb|ACI33459.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 206
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 47/68 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F T + L +AFS++G + + ++ D+ RS+G+G+VTF E+A+ A+A MNGK +
Sbjct: 12 LCFDTDETSLEEAFSKYGNIAKVDVVRDRETQRSRGFGFVTFENPEDAKDAMAAMNGKSV 71
Query: 61 DGRVIFVD 68
DGR+I VD
Sbjct: 72 DGRMIRVD 79
>gi|426386443|ref|XP_004059694.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Gorilla
gorilla gorilla]
gi|426386445|ref|XP_004059695.1| PREDICTED: cold-inducible RNA-binding protein isoform 3 [Gorilla
gorilla gorilla]
Length = 168
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|323650232|gb|ADX97202.1| cold-inducible RNA-binding protein [Perca flavescens]
Length = 80
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 45/68 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF TT+E LA AF +FG + + +I D+ S+G+G+V + E+A+ A+ MNGK L
Sbjct: 9 LSFDTTEESLAAAFGKFGTIEKVDVIKDRDTGYSRGFGFVKYENSEDAKDAMEGMNGKTL 68
Query: 61 DGRVIFVD 68
DGR I VD
Sbjct: 69 DGRAIRVD 76
>gi|387861097|gb|AFK08578.1| glycine-rich RNA binding protein 2c [Camelina sativa]
gi|387861103|gb|AFK08581.1| glycine-rich RNA binding protein 2c [Camelina sativa]
Length = 158
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T L DAF+ FG+V +A +I+D+ R +G+G+V FS E A A+++M+GK L
Sbjct: 43 LSWGTDDASLRDAFAHFGEVVDAKVIVDRETGRPRGFGFVNFSDETAASAAISEMDGKDL 102
Query: 61 DGRVIFVD--NVRPS 73
+GR I V+ N RPS
Sbjct: 103 NGRNIRVNPANDRPS 117
>gi|407941455|ref|YP_006857096.1| RNP-1 like RNA-binding protein [Acidovorax sp. KKS102]
gi|407899249|gb|AFU48458.1| RNP-1 like RNA-binding protein [Acidovorax sp. KKS102]
Length = 188
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 44/72 (61%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ +S L AF QFG VT A ++M++ RSKG+G+V ++ EAQ A+ MNG+ L
Sbjct: 10 LPYSVRDGDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAINGMNGQPL 69
Query: 61 DGRVIFVDNVRP 72
GR I V+ RP
Sbjct: 70 GGRSIVVNEARP 81
>gi|260221864|emb|CBA30852.1| Putative RNA-binding protein rbpB [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 124
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ +S T + L FS+FG+VT A ++MD+ RSKG+ +V ST AQ A+ +NG+ +
Sbjct: 36 LPYSVTDDSLQSNFSEFGEVTSAKVMMDRDTGRSKGFAFVEMSTPAFAQAAIDGLNGQSV 95
Query: 61 DGRVIFVDNVRP 72
DGR I V+ RP
Sbjct: 96 DGRSIVVNLARP 107
>gi|351699548|gb|EHB02467.1| Cold-inducible RNA-binding protein, partial [Heterocephalus
glaber]
Length = 167
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|359688008|ref|ZP_09258009.1| RNP-1 like RNA-binding protein [Leptospira licerasiae serovar
Varillal str. MMD0835]
Length = 100
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+STT L F G + EA I++D+ RS+G+G+VTF + A A++++NGK L
Sbjct: 10 LSWSTTDLTLRQVFETHGAIQEANIVVDRETGRSRGFGFVTFVDQSSANAAVSELNGKDL 69
Query: 61 DGRVIFV----DNVRPSRRYNTDAPLAR 84
DGR I V D R R NT+ R
Sbjct: 70 DGRNIVVSVAEDKSRSDRNRNTNRKFQR 97
>gi|348550387|ref|XP_003461013.1| PREDICTED: LOW QUALITY PROTEIN: cold-inducible RNA-binding
protein-like [Cavia porcellus]
Length = 173
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 47/68 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L + FS++GQ+ E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQSLEEVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVD 68
DGR I VD
Sbjct: 73 DGRQIRVD 80
>gi|326514928|dbj|BAJ99825.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326517426|dbj|BAK00080.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 153
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
TT + L +AF++FG+V A +I D+ SKG+G+V + T E+A K + M+G+ LDG V
Sbjct: 59 TTTDGLREAFAKFGEVEHARVITDRVTGFSKGFGFVRYVTVEDAAKGIEGMDGEFLDGWV 118
Query: 65 IFVDNVRP 72
IF + RP
Sbjct: 119 IFAEYARP 126
>gi|212722916|ref|NP_001132731.1| uncharacterized protein LOC100194217 [Zea mays]
gi|194695242|gb|ACF81705.1| unknown [Zea mays]
gi|413933459|gb|AFW68010.1| responsive to abscisic acid15 [Zea mays]
Length = 96
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T+ E L +AF+ +G++ ++ +I D+ RS+G+G+VTFS+E A+ +MNGK L
Sbjct: 15 LAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKEL 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRNITVN 82
>gi|149034582|gb|EDL89319.1| cold inducible RNA binding protein, isoform CRA_d [Rattus
norvegicus]
gi|149034583|gb|EDL89320.1| cold inducible RNA binding protein, isoform CRA_d [Rattus
norvegicus]
Length = 176
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|260787130|ref|XP_002588608.1| hypothetical protein BRAFLDRAFT_251348 [Branchiostoma floridae]
gi|229273773|gb|EEN44619.1| hypothetical protein BRAFLDRAFT_251348 [Branchiostoma floridae]
Length = 130
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 43/68 (63%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T++ L AFS+FG VTE +I D RS+G+G+V FS EA A DM+ + L
Sbjct: 7 LSWGTSEASLCQAFSRFGTVTECKVIRDHWTGRSRGFGFVKFSAPSEADVARKDMHFQHL 66
Query: 61 DGRVIFVD 68
DGR I VD
Sbjct: 67 DGRTIRVD 74
>gi|73987334|ref|XP_868600.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Canis
lupus familiaris]
Length = 185
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|281341352|gb|EFB16936.1| hypothetical protein PANDA_012739 [Ailuropoda melanoleuca]
Length = 167
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|384099683|ref|ZP_10000766.1| RNP-1 like RNA-binding protein [Imtechella halotolerans K1]
gi|383832219|gb|EID71694.1| RNP-1 like RNA-binding protein [Imtechella halotolerans K1]
Length = 92
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 45/74 (60%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T++E L D F+ FG+V+ +I+D NRS+G+ +V E A A+ +N +L
Sbjct: 8 LSFQTSEEQLLDVFTPFGEVSSVKVIVDGYSNRSRGFAFVEMPVSEHALTAIERLNESML 67
Query: 61 DGRVIFVDNVRPSR 74
D RVI V+ +P R
Sbjct: 68 DSRVIVVNEAKPKR 81
>gi|224130158|ref|XP_002328668.1| predicted protein [Populus trichocarpa]
gi|222838844|gb|EEE77195.1| predicted protein [Populus trichocarpa]
Length = 142
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T L +AF ++G V E IIMD+ RS+G+G+VT+++ EEA A+ M+G+ L
Sbjct: 47 ISFQTDDNGLKEAFDKYGNVVEGIIIMDRDTGRSRGFGFVTYTSSEEASSAIQAMDGQDL 106
Query: 61 DGRVIFVDNV--RPSRRY 76
GR + V+ RP R +
Sbjct: 107 HGRRVRVNYATERPQRTF 124
>gi|259089109|ref|NP_001158591.1| cold inducible RNA binding protein [Oncorhynchus mykiss]
gi|225705082|gb|ACO08387.1| Cold-inducible RNA-binding protein [Oncorhynchus mykiss]
Length = 209
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 47/68 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F T + L +AFS++G + + ++ D+ RS+G+G+VTF E+A+ A+A MNGK +
Sbjct: 12 LCFDTDETSLEEAFSKYGNIAKVDVVRDRETRRSRGFGFVTFENPEDAKDAMAAMNGKSV 71
Query: 61 DGRVIFVD 68
DGR+I VD
Sbjct: 72 DGRMIRVD 79
>gi|169244425|gb|ACA50486.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|306415963|gb|ADM86856.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|385718874|gb|AFI71864.1| Glycin-rich RNA binding protein [Oryza sativa]
Length = 161
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 49/74 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L AFS +G++ E+ II D+ RS+G+G+VTFS+E+ + A+ MNGK L
Sbjct: 15 LAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGKEL 74
Query: 61 DGRVIFVDNVRPSR 74
DGR I V+ + R
Sbjct: 75 DGRNITVNEAQSRR 88
>gi|125537516|gb|EAY84004.1| hypothetical protein OsI_39235 [Oryza sativa Indica Group]
Length = 161
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 49/74 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L AFS +G++ E+ II D+ RS+G+G+VTFS+E+ + A+ MNGK L
Sbjct: 15 LAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGKEL 74
Query: 61 DGRVIFVDNVRPSR 74
DGR I V+ + R
Sbjct: 75 DGRNITVNEAQSRR 88
>gi|21388660|dbj|BAC00786.1| glycine-rich RNA-binding protein [Physcomitrella patens]
Length = 178
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++TT L +AF FG+V + +I D+ RS+G+G+VTF+ E +A+ DMNGK L
Sbjct: 12 LAWATTDGSLEEAFRPFGEVVQCKVITDRETGRSRGFGFVTFADENSMNEAIKDMNGKEL 71
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 72 DGRNITVN 79
>gi|374376206|ref|ZP_09633864.1| RNP-1 like RNA-binding protein [Niabella soli DSM 19437]
gi|373233046|gb|EHP52841.1| RNP-1 like RNA-binding protein [Niabella soli DSM 19437]
Length = 110
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 51/78 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++ + L + F+ +G+VT A I+ DK NRSKG+G+V +T+EEA+ A+ +NG +
Sbjct: 8 LSWNLKDQDLQNLFAPYGEVTSAKIVSDKFTNRSKGFGFVEMATDEEAKAAIEALNGTEV 67
Query: 61 DGRVIFVDNVRPSRRYNT 78
DGR I V+ RP N+
Sbjct: 68 DGRNIVVNESRPKEGGNS 85
>gi|120610816|ref|YP_970494.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
gi|120589280|gb|ABM32720.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
Length = 116
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 45/70 (64%)
Query: 3 FSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDG 62
+S T E L F++FG VT + I+ D+ RSKG+G+V S+ E+AQ A+ +NG +DG
Sbjct: 12 YSVTDESLRSNFAEFGGVTSSKIMTDRETGRSKGFGFVEMSSAEDAQSAITGLNGLSVDG 71
Query: 63 RVIFVDNVRP 72
R I V+ RP
Sbjct: 72 RSIVVNLARP 81
>gi|20152613|emb|CAD29693.1| putative glycine rich protein [Rumex obtusifolius]
Length = 168
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 48/68 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T + L AFS +GQV E+ II D+ RS+G+G+VTFS+E+ + A+ MNG+ L
Sbjct: 14 LAWATDDQSLERAFSNYGQVLESKIINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGQDL 73
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 74 DGRNITVN 81
>gi|302791061|ref|XP_002977297.1| hypothetical protein SELMODRAFT_107195 [Selaginella
moellendorffii]
gi|300154667|gb|EFJ21301.1| hypothetical protein SELMODRAFT_107195 [Selaginella
moellendorffii]
Length = 180
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 45/74 (60%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+STT L AF +G + EA ++ D+ NRS+G+G+VTF EE + A+ M+ + L
Sbjct: 12 LSWSTTDRSLETAFRPYGSIIEAKVVFDRETNRSRGFGFVTFEDEESMENAIRKMHNQEL 71
Query: 61 DGRVIFVDNVRPSR 74
+GR I V P R
Sbjct: 72 EGRSITVSKAEPPR 85
>gi|112994|sp|P10979.1|GRPA_MAIZE RecName: Full=Glycine-rich RNA-binding, abscisic acid-inducible
protein
gi|22313|emb|CAA31077.1| ABA-inducible gene protein [Zea mays]
gi|195605904|gb|ACG24782.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195617536|gb|ACG30598.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195620254|gb|ACG31957.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195637320|gb|ACG38128.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|226091|prf||1410284A abscisic acid inducible gene
Length = 157
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T+ E L +AF+ +G++ ++ +I D+ RS+G+G+VTFS+E A+ +MNGK L
Sbjct: 15 LAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKEL 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRNITVN 82
>gi|413933457|gb|AFW68008.1| responsive to abscisic acid15 [Zea mays]
Length = 159
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T+ E L +AF+ +G++ ++ +I D+ RS+G+G+VTFS+E A+ +MNGK L
Sbjct: 15 LAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKEL 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRNITVN 82
>gi|226491203|ref|NP_001151562.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195647746|gb|ACG43341.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 156
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T+ E L +AF+ +G++ ++ +I D+ RS+G+G+VTFS+E A+ +MNGK L
Sbjct: 15 LAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKEL 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRNITVN 82
>gi|195645042|gb|ACG41989.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 142
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T+ E L +AF+ +G++ ++ +I D+ RS+G+G+VTFS+E A+ +MNGK L
Sbjct: 15 LAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKEL 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRNITVN 82
>gi|194700358|gb|ACF84263.1| unknown [Zea mays]
gi|413933458|gb|AFW68009.1| responsive to abscisic acid15 [Zea mays]
Length = 140
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T+ E L +AF+ +G++ ++ +I D+ RS+G+G+VTFS+E A+ +MNGK L
Sbjct: 15 LAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKEL 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRNITVN 82
>gi|2826811|emb|CAA05727.1| AtGRP2 [Arabidopsis thaliana]
Length = 150
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T L DAF+ FG V +A +I+D+ RS+G+G+V F+ E A A+++M+GK L
Sbjct: 42 LSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKEL 101
Query: 61 DGRVIFVD--NVRPS 73
+GR I V+ N RPS
Sbjct: 102 NGRHIRVNPANDRPS 116
>gi|224105391|ref|XP_002313795.1| predicted protein [Populus trichocarpa]
gi|222850203|gb|EEE87750.1| predicted protein [Populus trichocarpa]
Length = 128
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 50/68 (73%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++TT ++L +AFSQ+G++ ++ II D+ RS+G+G+VTF E+ + A+ MNG+ L
Sbjct: 13 LAWATTDQVLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFGNEKAMRDAIDGMNGQDL 72
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 73 DGRNITVN 80
>gi|404403808|ref|ZP_10995392.1| RNP-1 like RNA-binding protein [Alistipes sp. JC136]
Length = 105
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 47/72 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T+ E L + F+QFG+V A +I D+ RS+G+G+V +E+A+KA+ +NG
Sbjct: 8 LSWGTSSEGLGNLFAQFGEVASANVITDRETGRSRGFGFVEMPDDEQARKAMEQLNGTNF 67
Query: 61 DGRVIFVDNVRP 72
+G+ I V+ RP
Sbjct: 68 EGQTITVNEARP 79
>gi|344307815|ref|XP_003422574.1| PREDICTED: LOW QUALITY PROTEIN: cold-inducible RNA-binding
protein-like [Loxodonta africana]
Length = 169
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|348501352|ref|XP_003438234.1| PREDICTED: cold-inducible RNA-binding protein A-like [Oreochromis
niloticus]
Length = 183
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 45/68 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ LA AF ++G + + +I DK RS+G+G+V + E+A+ AL MNGK L
Sbjct: 12 LSFETNEDSLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNAEDAKDALDAMNGKTL 71
Query: 61 DGRVIFVD 68
DGR I VD
Sbjct: 72 DGRAIRVD 79
>gi|346978360|gb|EGY21812.1| glycine-rich RNA-binding protein [Verticillium dahliae VdLs.17]
Length = 175
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ TT+E L F +FG V EA ++ D+ RS+G+G+V +S +E+AQKA+ MN
Sbjct: 9 LAWHTTEETLRSRFEEFGAVDEAVVVKDRDTGRSRGFGFVRYSQDEDAQKAIDAMNNVEF 68
Query: 61 DGRVIFVD 68
DGR I VD
Sbjct: 69 DGRTIRVD 76
>gi|209737234|gb|ACI69486.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 146
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 47/68 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F T + L +AFS++G + + ++ D+ RS+G+G+VTF E+A+ A+A MNGK +
Sbjct: 12 LCFDTDETSLEEAFSKYGNIAKVDVVRDRETQRSRGFGFVTFENPEDAKDAMAAMNGKSV 71
Query: 61 DGRVIFVD 68
DGR+I VD
Sbjct: 72 DGRMIRVD 79
>gi|829254|emb|CAA49174.1| glycine-rich RNA-binding protein [Arabidopsis thaliana]
Length = 139
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T L DAF+ FG V +A +I+D+ RS+G+G+V F+ E A A+++M+GK L
Sbjct: 23 LSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKEL 82
Query: 61 DGRVIFVD--NVRPS 73
+GR I V+ N RPS
Sbjct: 83 NGRHIRVNPANDRPS 97
>gi|156841314|ref|XP_001644031.1| hypothetical protein Kpol_1026p21 [Vanderwaltozyma polyspora DSM
70294]
gi|156114664|gb|EDO16173.1| hypothetical protein Kpol_1026p21 [Vanderwaltozyma polyspora DSM
70294]
Length = 437
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 45/68 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+S E L + F G V A +I ++G +RS+GYGYV FS++ A++A+ +M+GK +
Sbjct: 185 LSWSVDDEWLKNEFEHIGDVIGARVIYERGTDRSRGYGYVDFSSKSAAERAVKEMHGKQI 244
Query: 61 DGRVIFVD 68
DGR I D
Sbjct: 245 DGREINCD 252
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 38/72 (52%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF+ ++ + + FS+ G++ + + KG+GYV + +AQ AL + G+ +
Sbjct: 286 LSFNADRDQIYELFSKHGEIISVRLPTHPETEQPKGFGYVQYGNVNDAQSALDALQGEYI 345
Query: 61 DGRVIFVDNVRP 72
D R + +D P
Sbjct: 346 DNRPVRLDFSTP 357
>gi|74006873|ref|XP_863171.1| PREDICTED: uncharacterized protein LOC609457 isoform 2 [Canis
lupus familiaris]
Length = 162
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F+T ++ L D F FG ++E ++ D+ RS+G+G++TF+ E A A+ MNG+ L
Sbjct: 13 LNFNTDEQALEDHFRSFGPISEVVVVKDRETQRSRGFGFITFTDPEHASDAMRAMNGESL 72
Query: 61 DGRVIFVDNVRPSRR 75
DGR I VD+ S R
Sbjct: 73 DGRQIRVDHAGKSAR 87
>gi|1778374|gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pisum sativum]
gi|206586422|gb|ACI15745.1| glycine-rich RNA-binding protein [Pisum sativum]
Length = 146
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ + L DAF+ +G+V EA +I D+ RS+G+G+V F+++E A AL+ M+G+ L
Sbjct: 43 LSYGVDDQSLKDAFASYGEVVEARVITDRDTGRSRGFGFVNFTSDESATSALSAMDGQDL 102
Query: 61 DGRVIFVD--NVRPS 73
+GR I V N RPS
Sbjct: 103 NGRNIRVSYANDRPS 117
>gi|302679630|ref|XP_003029497.1| hypothetical protein SCHCODRAFT_85789 [Schizophyllum commune
H4-8]
gi|300103187|gb|EFI94594.1| hypothetical protein SCHCODRAFT_85789 [Schizophyllum commune
H4-8]
Length = 174
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++TT + L AFS FGQV ++ ++ D+ RS+G+G+VTFS+ EA+ A++ +N + L
Sbjct: 10 LSWNTTDDTLRQAFSNFGQVLDSIVMRDRETGRSRGFGFVTFSSSGEAESAISSLNEQEL 69
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 70 DGRRIKVN 77
>gi|337281472|ref|YP_004620944.1| glycine-rich RNA binding protein [Ramlibacter tataouinensis
TTB310]
gi|334732549|gb|AEG94925.1| Candidate glycine-rich RNA binding protein [Ramlibacter
tataouinensis TTB310]
Length = 159
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 3 FSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDG 62
+S L AFSQFG V+ A ++M++ RSKG+G+V ++ EAQ A+ MNG+ L G
Sbjct: 12 YSVRDSDLEQAFSQFGAVSSAKVMMERDTGRSKGFGFVEMGSDAEAQAAINGMNGQPLGG 71
Query: 63 RVIFVDNVRP 72
R + V+ RP
Sbjct: 72 RSVVVNEARP 81
>gi|449486948|ref|XP_004157450.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 173
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 46/65 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T + L +AF+++G+V EA +IMD+ RS+G+G+VTF E+A A+ ++G+ L
Sbjct: 47 LSYGTDDQRLTEAFTKYGEVVEARVIMDRDTGRSRGFGFVTFGASEDASSAIQALDGQDL 106
Query: 61 DGRVI 65
DGR I
Sbjct: 107 DGRRI 111
>gi|449439323|ref|XP_004137435.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 171
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 46/65 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T + L +AF+++G+V EA +IMD+ RS+G+G+VTF E+A A+ ++G+ L
Sbjct: 47 LSYGTDDQRLTEAFTKYGEVVEARVIMDRDTGRSRGFGFVTFGASEDASSAIQALDGQDL 106
Query: 61 DGRVI 65
DGR I
Sbjct: 107 DGRRI 111
>gi|326487400|dbj|BAJ89684.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511469|dbj|BAJ87748.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511763|dbj|BAJ92026.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326514088|dbj|BAJ92194.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326527877|dbj|BAJ88990.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326534068|dbj|BAJ89384.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 306
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++ T EML DAF + G V A ++ D RS+GYG+V +ST+EE +A+ +NG +
Sbjct: 232 LSWTVTPEMLTDAFQRCGNVVGARVLYDGETGRSRGYGFVCYSTKEEMDQAIETLNGTEI 291
Query: 61 DGRVIFVDNVRPSRRY 76
+GR I V N+ +RY
Sbjct: 292 EGREIRV-NLALGKRY 306
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 29/44 (65%)
Query: 25 IIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFVD 68
++ D+ RS+G+ +VT ST E+ ++ + +++G L GR + V+
Sbjct: 165 VLYDRTTGRSRGFAFVTMSTLEDCERVIKNLDGTLYSGRTMRVN 208
>gi|30682622|ref|NP_849377.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|332657934|gb|AEE83334.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 153
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T L DAF+ FG V +A +I+D+ RS+G+G+V F+ E A A+++M+GK L
Sbjct: 42 LSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKEL 101
Query: 61 DGRVIFVD--NVRPS 73
+GR I V+ N RPS
Sbjct: 102 NGRHIRVNPANDRPS 116
>gi|15236359|ref|NP_193121.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|25090505|sp|Q9SVM8.1|GRP2_ARATH RecName: Full=Glycine-rich RNA-binding protein 2, mitochondrial;
Short=AtGRP2; Flags: Precursor
gi|4455314|emb|CAB36849.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gi|7268089|emb|CAB78427.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gi|18252853|gb|AAL62353.1| glycine-rich RNA-binding protein AtGRP2 - like [Arabidopsis
thaliana]
gi|21553749|gb|AAM62842.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gi|25084267|gb|AAN72208.1| glycine-rich RNA-binding protein AtGRP2 - like [Arabidopsis
thaliana]
gi|332657933|gb|AEE83333.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 158
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T L DAF+ FG V +A +I+D+ RS+G+G+V F+ E A A+++M+GK L
Sbjct: 42 LSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKEL 101
Query: 61 DGRVIFVD--NVRPS 73
+GR I V+ N RPS
Sbjct: 102 NGRHIRVNPANDRPS 116
>gi|194336480|ref|YP_002018274.1| RNP-1 like RNA-binding protein [Pelodictyon phaeoclathratiforme
BU-1]
gi|194308957|gb|ACF43657.1| RNP-1 like RNA-binding protein [Pelodictyon phaeoclathratiforme
BU-1]
Length = 95
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 50/71 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++ +++ L DAFS+FG+V A+II DK RSKG+G+V + EA++A+ MNGK L
Sbjct: 8 LAYTVSEDDLRDAFSEFGEVANASIINDKFSGRSKGFGFVEMPKDSEAREAIESMNGKDL 67
Query: 61 DGRVIFVDNVR 71
+GR + V+ +
Sbjct: 68 NGRTVTVNEAK 78
>gi|145333039|ref|NP_001078385.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|332657935|gb|AEE83335.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 144
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T L DAF+ FG V +A +I+D+ RS+G+G+V F+ E A A+++M+GK L
Sbjct: 42 LSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKEL 101
Query: 61 DGRVIFVD--NVRPS 73
+GR I V+ N RPS
Sbjct: 102 NGRHIRVNPANDRPS 116
>gi|334326698|ref|XP_001365067.2| PREDICTED: cold-inducible RNA-binding protein-like [Monodelphis
domestica]
Length = 172
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ+ E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|302780311|ref|XP_002971930.1| hypothetical protein SELMODRAFT_172546 [Selaginella
moellendorffii]
gi|300160229|gb|EFJ26847.1| hypothetical protein SELMODRAFT_172546 [Selaginella
moellendorffii]
Length = 173
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 45/74 (60%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+STT L AF +G + EA ++ D+ NRS+G+G+VTF EE + A+ M+ + L
Sbjct: 12 LSWSTTDRSLETAFRPYGSIIEAKVVFDRETNRSRGFGFVTFEDEESMENAIRKMHNQEL 71
Query: 61 DGRVIFVDNVRPSR 74
+GR I V P R
Sbjct: 72 EGRSITVSKAEPPR 85
>gi|3342756|gb|AAC41383.1| RNA-binding protein AxRNBP [Ambystoma mexicanum]
Length = 144
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF + + L AFS++G V +A ++ D+ RS+G+G+VTF +A++AL MNG+ L
Sbjct: 14 LSFDSNEHSLESAFSKYGDVCDAVVVKDRETGRSRGFGFVTFRNPSDAKEALHAMNGESL 73
Query: 61 DGRVIFVD 68
DGR I VD
Sbjct: 74 DGRQIRVD 81
>gi|356508388|ref|XP_003522939.1| PREDICTED: uncharacterized protein LOC100806292 [Glycine max]
Length = 185
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 50/72 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T + L AFS +G++ E+ +I+D+ RS+G+G+VTF++E+ + A+ MNG+ L
Sbjct: 15 LAWATDSDALEKAFSHYGEIVESKVIIDRETGRSRGFGFVTFASEQAMKDAIEGMNGQNL 74
Query: 61 DGRVIFVDNVRP 72
DGR I V+ +
Sbjct: 75 DGRSITVNEAQS 86
>gi|375103924|ref|ZP_09750185.1| RRM domain-containing RNA-binding protein [Burkholderiales
bacterium JOSHI_001]
gi|374664655|gb|EHR69440.1| RRM domain-containing RNA-binding protein [Burkholderiales
bacterium JOSHI_001]
Length = 129
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++S T L F++ G VT A ++MD+ RSKG+G+V + EEAQ A+ ++G +
Sbjct: 10 LAYSVTDASLQQQFAECGTVTSAKVMMDRDSGRSKGFGFVEMGSHEEAQAAIRKLHGASV 69
Query: 61 DGRVIFVDNVRP 72
DGR + V+ RP
Sbjct: 70 DGRALVVNEARP 81
>gi|170098488|ref|XP_001880463.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644901|gb|EDR09150.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 154
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++TT + L AFS+FGQV ++ ++ D+ RS+G+G+VTFS+ +EA A+ +N + L
Sbjct: 10 LSWNTTDDTLRQAFSEFGQVLDSIVMRDRDTGRSRGFGFVTFSSGQEADAAIGGLNEQEL 69
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 70 DGRRIKVN 77
>gi|392570008|gb|EIW63181.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 126
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++TT + L AFS +GQ+ ++ ++ D+ RS+G+G+VTFS+ EAQ A++ +N + L
Sbjct: 10 LSWNTTDDSLRSAFSNYGQILDSIVMRDRDTGRSRGFGFVTFSSSGEAQTAISSLNEQEL 69
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 70 DGRRIKVN 77
>gi|145219698|ref|YP_001130407.1| RNP-1 like RNA-binding protein [Chlorobium phaeovibrioides DSM
265]
gi|145205862|gb|ABP36905.1| RNP-1 like RNA-binding protein [Chlorobium phaeovibrioides DSM
265]
Length = 90
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 48/72 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ ++ +++ L DAFS+FGQV A IIMDK RSKG+G+V S ++ A++A+ M+ K
Sbjct: 8 LPYTVSEDDLRDAFSEFGQVESANIIMDKFSGRSKGFGFVEMSDDDAAREAIEAMHNKDF 67
Query: 61 DGRVIFVDNVRP 72
GR I V+ +P
Sbjct: 68 MGRSIMVNEAKP 79
>gi|255949670|ref|XP_002565602.1| Pc22g16890 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592619|emb|CAP98977.1| Pc22g16890 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 724
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S T E LA+ FSQ + A ++ DK SKG+G+VTF+ E+A+ AL ++NG DG+
Sbjct: 46 SATTESLAEYFSQSYIIKHAVVVCDKETKASKGFGFVTFADVEDAESALKELNGSKFDGK 105
Query: 64 VIFVDNVRPSRRYNTDAPLARQLP 87
VI VD SR+ D + R +P
Sbjct: 106 VIRVDYAE-SRKREIDEKVGRSVP 128
Score = 42.0 bits (97), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 14 FSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFVD 68
F FG+V AT+ GK G+G++T + A++AL +NGK +DGR + VD
Sbjct: 170 FRSFGKVKFATLPKRNGK--LSGFGFITMRGRKNAERALQMINGKEIDGRQLAVD 222
>gi|111162637|gb|ABH07505.1| glycine-rich RNA-binding protein [Nicotiana attenuata]
Length = 152
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 49/72 (68%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++TT + L DAFSQFG++ ++ II D+ RS+G+G+VTF E+ + A+ M G+ L
Sbjct: 13 LAWATTDQTLGDAFSQFGEILDSKIINDRETGRSRGFGFVTFKDEKAMRDAIEGMKGQDL 72
Query: 61 DGRVIFVDNVRP 72
DGR I V+ +
Sbjct: 73 DGRNITVNEAQS 84
>gi|432915990|ref|XP_004079241.1| PREDICTED: cold-inducible RNA-binding protein-like [Oryzias
latipes]
Length = 174
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 45/68 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ LA AF ++G + + +I DK RS+G+G+V + E+A+ AL MNGK L
Sbjct: 12 LSFETNEDSLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNVEDAKDALDAMNGKTL 71
Query: 61 DGRVIFVD 68
DGR I VD
Sbjct: 72 DGRAIRVD 79
>gi|395513325|ref|XP_003760877.1| PREDICTED: cold-inducible RNA-binding protein [Sarcophilus
harrisii]
Length = 172
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ+ E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|168038795|ref|XP_001771885.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676836|gb|EDQ63314.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 157
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 48/68 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T + L DAF FG VT+ II+D+ RS+G+G+V F++ +EA+ AL +M+G+ L
Sbjct: 52 LAWATDENTLRDAFGSFGTVTDVKIILDRDTGRSRGFGFVNFTSPQEAEVALQEMDGREL 111
Query: 61 DGRVIFVD 68
GR I VD
Sbjct: 112 AGRQIRVD 119
>gi|410949903|ref|XP_003981656.1| PREDICTED: cold-inducible RNA-binding protein [Felis catus]
Length = 172
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ+ E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|239818248|ref|YP_002947158.1| RNP-1 like RNA-binding protein [Variovorax paradoxus S110]
gi|239804825|gb|ACS21892.1| RNP-1 like RNA-binding protein [Variovorax paradoxus S110]
Length = 181
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ +S L AF QFG VT A ++M++ RSKG+G+V ++ EAQ A+ MNG+ L
Sbjct: 10 LPYSVRDSDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAINGMNGQPL 69
Query: 61 DGRVIFVDNVRP 72
GR + V+ RP
Sbjct: 70 GGRSVVVNEARP 81
>gi|426198367|gb|EKV48293.1| hypothetical protein AGABI2DRAFT_142473 [Agaricus bisporus var.
bisporus H97]
Length = 559
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+S + LA FS+ G+V+ AT+ +D+ RS+G+GYV FST + +KAL MNG +
Sbjct: 315 LSWSVDNDRLAQEFSECGEVSSATVQLDRNTGRSRGFGYVHFSTADAVEKAL-KMNGYEI 373
Query: 61 DGRVIFVD 68
DGR I VD
Sbjct: 374 DGRAIKVD 381
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 3 FSTTKEMLADAFSQFGQVTEATIIM--DKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
FS T++ L +S F + TI + D+ + KG+GYV E+A+KA ++G+ +
Sbjct: 417 FSITEDGL---WSYFDGHSVKTIRLPTDRETGQLKGFGYVELENVEDAKKAFEAISGQEI 473
Query: 61 DGRVIFVDNVRP 72
+GR + VD +P
Sbjct: 474 EGRRVRVDYSQP 485
>gi|224121390|ref|XP_002318570.1| predicted protein [Populus trichocarpa]
gi|222859243|gb|EEE96790.1| predicted protein [Populus trichocarpa]
Length = 255
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T L +AF ++G V EA IIMD+ RS+G+G+VT+++ EEA A+ ++G+ L
Sbjct: 47 ISFQTDDNSLKEAFDKYGNVVEARIIMDRETGRSRGFGFVTYTSSEEASSAIQALDGQDL 106
Query: 61 DGRVIFVDNV--RPSRRY 76
GR + V+ RP R +
Sbjct: 107 HGRRVRVNYATERPQRTF 124
>gi|18103931|emb|CAC83314.1| glycine rich RNA binding protein [Oryza sativa Indica Group]
Length = 194
Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 49/74 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L AFS +G++ E+ II D+ RS+G+G+VTFS+E+ + A+ MNGK L
Sbjct: 15 LAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGKEL 74
Query: 61 DGRVIFVDNVRPSR 74
DGR I V+ + R
Sbjct: 75 DGRNITVNEAQSRR 88
>gi|409079870|gb|EKM80231.1| hypothetical protein AGABI1DRAFT_73218 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 568
Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+S + LA FS+ G+V+ AT+ +D+ RS+G+GYV FST + +KAL MNG +
Sbjct: 315 LSWSVDNDRLAQEFSECGEVSSATVQLDRNTGRSRGFGYVHFSTADAVEKAL-KMNGYEI 373
Query: 61 DGRVIFVDNVRP 72
DGR I VD P
Sbjct: 374 DGRAIKVDLSTP 385
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 3 FSTTKEMLADAFSQFGQVTEATIIM--DKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
FS T++ L +S F + TI + D+ + KG+GYV E+A+KA ++G+ +
Sbjct: 417 FSITEDGL---WSYFDGHSVKTIRLPTDRETGQLKGFGYVELENVEDAKKAFEAISGQEI 473
Query: 61 DGRVIFVDNVRP 72
+GR + VD +P
Sbjct: 474 EGRRVRVDYSQP 485
>gi|356519721|ref|XP_003528518.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Glycine max]
Length = 137
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 43/63 (68%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+S + L +AFS FG VTE TI+ DK RS+G+G+V FS E++A+ A M+GK L
Sbjct: 45 LSWSVDHKSLKEAFSSFGDVTEVTIVYDKDSGRSRGFGFVIFSNEDDAKCAKDAMDGKAL 104
Query: 61 DGR 63
GR
Sbjct: 105 LGR 107
>gi|332531199|ref|ZP_08407112.1| RNP-1 like RNA-binding protein [Hylemonella gracilis ATCC 19624]
gi|332039306|gb|EGI75719.1| RNP-1 like RNA-binding protein [Hylemonella gracilis ATCC 19624]
Length = 131
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++S L AF QFG VT A ++M++ RSKG+G+V ++ EAQ A+ +NG+ L
Sbjct: 10 LAYSIRDNDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAINGLNGQPL 69
Query: 61 DGRVIFVDNVRP 72
GR + V+ RP
Sbjct: 70 SGRNVVVNEARP 81
>gi|224077836|ref|XP_002305429.1| predicted protein [Populus trichocarpa]
gi|118481826|gb|ABK92850.1| unknown [Populus trichocarpa]
gi|222848393|gb|EEE85940.1| predicted protein [Populus trichocarpa]
Length = 165
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 50/68 (73%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++TT + L +AFSQ+G++ ++ II D+ RS+G+G+VTF+ E+ + A+ MNG+ L
Sbjct: 14 LAWATTDQSLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFNNEKAMRDAIDGMNGQDL 73
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 74 DGRNITVN 81
>gi|334312764|ref|XP_003339775.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
1-like [Monodelphis domestica]
Length = 614
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L + FSQFG+ +++D+ +S+G+G+V F EEAQKA+++MNGK L GRV++V
Sbjct: 205 ECLQELFSQFGKTLSVKVMVDE-NGQSRGFGFVNFEKHEEAQKAVSNMNGKELGGRVLYV 263
Query: 68 DNVRPSRRYNTDAPLARQLPQSPEE 92
R +R + L R+ Q +E
Sbjct: 264 G--RAQKRSERQSELKRRFEQMKQE 286
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S + L D FS FG + ++ D+ N S+G+G+V F T E A +A+ MNG LL+ R
Sbjct: 109 SIDNKALYDTFSTFGNILSCKVVCDE--NGSRGFGFVHFETHEAANQAINTMNGMLLNDR 166
Query: 64 VIFVDNVR 71
+FV + +
Sbjct: 167 KVFVGHFK 174
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L FS +G +T A ++ + G SKG+G+V FS+ EEA KA+ +MNG+++ + ++V
Sbjct: 308 EKLRKEFSPYGVITSAKVMTEGG--HSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYV 365
>gi|351725469|ref|NP_001238373.1| glycine-rich RNA-binding protein [Glycine max]
gi|5726567|gb|AAD48471.1|AF169205_1 glycine-rich RNA-binding protein [Glycine max]
Length = 160
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 47/68 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L AFSQ+G++ E II D+ RS+G+G+VTF++E+ + A+ MNG+ L
Sbjct: 15 LAWATDDHALERAFSQYGEIVETKIINDRETGRSRGFGFVTFASEQSMKDAIGAMNGQNL 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRNITVN 82
>gi|254572962|ref|XP_002493590.1| Nucleolar protein that binds nuclear localization sequences
[Komagataella pastoris GS115]
gi|238033389|emb|CAY71411.1| Nucleolar protein that binds nuclear localization sequences
[Komagataella pastoris GS115]
gi|328354581|emb|CCA40978.1| Nuclear localization sequence-binding protein [Komagataella
pastoris CBS 7435]
Length = 362
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+S E L F G V A ++M++ RS+GYGYV F + A+KAL +M GK +
Sbjct: 133 LSWSIDDEWLKKEFEHIGGVVGARVMMERATGRSRGYGYVDFDNKASAEKALEEMQGKEI 192
Query: 61 DGRVIFVD--NVRPSRRYNTDAPLAR 84
DGR I VD N +P+ AP AR
Sbjct: 193 DGRPINVDMSNSKPA------APAAR 212
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF ++ L + FS+ G VT I + KG+GYV FS+ +EA AL +NG+ +
Sbjct: 236 LSFQADRDTLFELFSKHGNVTSVRIPTHPETEQPKGFGYVQFSSVDEATGALEALNGEYV 295
Query: 61 DGRVIFVDNVRP 72
D R I +D P
Sbjct: 296 DNRPIRLDYSTP 307
>gi|258564224|ref|XP_002582857.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237908364|gb|EEP82765.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 146
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 47/68 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ TT E L + FS++G + EA ++ D+ NRS+G+G+V F++E EA A+ M+ +
Sbjct: 9 LAWHTTDETLREGFSKYGTIEEAIVVKDRDTNRSRGFGFVRFASEAEADAAMNAMSNQEF 68
Query: 61 DGRVIFVD 68
DGR+I VD
Sbjct: 69 DGRMIRVD 76
>gi|392593259|gb|EIW82584.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 116
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 50/72 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++TT + L AFS FG V ++ ++ D+ RS+G+G+VT+S+ +EA+ A++ +N + L
Sbjct: 11 LSWNTTDDTLRQAFSTFGNVVDSVVMRDRDTGRSRGFGFVTYSSTQEAESAISGLNDQDL 70
Query: 61 DGRVIFVDNVRP 72
DGR I V+ P
Sbjct: 71 DGRRIKVNIANP 82
>gi|145333041|ref|NP_001078386.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|332657936|gb|AEE83336.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 129
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T L DAF+ FG V +A +I+D+ RS+G+G+V F+ E A A+++M+GK L
Sbjct: 42 LSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKEL 101
Query: 61 DGRVIFVD--NVRPS 73
+GR I V+ N RPS
Sbjct: 102 NGRHIRVNPANDRPS 116
>gi|358056531|dbj|GAA97500.1| hypothetical protein E5Q_04178 [Mixia osmundae IAM 14324]
Length = 287
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 51/77 (66%), Gaps = 3/77 (3%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S +T + L D F++ G+V + ++ D+ RS+G+ +VT +E++A+KA+AD+NG+ +
Sbjct: 56 LSVNTRERDLEDVFTRIGEVDKVVVVYDQRSERSRGFAFVTMRSEDDAEKAIADLNGQEI 115
Query: 61 DGRVIFVD---NVRPSR 74
DGR + VD RP R
Sbjct: 116 DGRRVRVDYSLTTRPHR 132
>gi|308272084|emb|CBX28692.1| Glycine-rich RNA-binding protein 8 [uncultured Desulfobacterium
sp.]
Length = 127
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 45/72 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ ++ L AF Q G+V +II DK RSKG+G+V S++ EAQ A+ +NGK L
Sbjct: 8 LSYEVNEDDLRQAFEQLGKVDSVSIINDKYSGRSKGFGFVEMSSDAEAQAAIEGLNGKEL 67
Query: 61 DGRVIFVDNVRP 72
GR I V+ RP
Sbjct: 68 KGRAINVNEARP 79
>gi|357150983|ref|XP_003575643.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 108
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 49/71 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF TT+E L + FS FG + EA ++ D R KG+G+V +S++ A+KA+ M+G+++
Sbjct: 33 LSFYTTEEELKNIFSPFGAIEEARLMRDNQTGRPKGFGFVKYSSQVAAEKAVKAMDGRII 92
Query: 61 DGRVIFVDNVR 71
GR+IFV+ +
Sbjct: 93 RGRIIFVETAK 103
>gi|168035555|ref|XP_001770275.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678492|gb|EDQ64950.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 106
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++TT L +AF FG+V + +I D+ RS+G+G+VTF+ E +A+ DMNGK L
Sbjct: 9 LAWATTDGSLEEAFRPFGEVVQCKVITDRETGRSRGFGFVTFADENSMNEAIKDMNGKEL 68
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 69 DGRNITVN 76
>gi|388583201|gb|EIM23503.1| hypothetical protein WALSEDRAFT_67167 [Wallemia sebi CBS 633.66]
Length = 89
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ST E LA AFS FGQ+++ ++ D+ RS+G+G+VT++ + EA AL MN L
Sbjct: 12 LSWSTNDEDLARAFSPFGQISDYIVMKDRQTGRSRGFGFVTYANDREASSALESMNEVEL 71
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 72 DGRRIRVN 79
>gi|357152187|ref|XP_003576037.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 102
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 47/68 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ T + L +AF FG++ +A +I D+ RS+G+G+VTF+TE+ Q A+ MNGK +
Sbjct: 11 LAWVTDDQSLENAFRSFGEILDAKVIPDRETGRSRGFGFVTFTTEQAMQNAINAMNGKDI 70
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 71 DGRTISVN 78
>gi|326515712|dbj|BAK07102.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 104
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 52/74 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T + L +AFS++G V ++ II D+ RS+G+G+VTF+++E ++A+ MNG+ L
Sbjct: 13 LAWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 72
Query: 61 DGRVIFVDNVRPSR 74
DGR I V+ + R
Sbjct: 73 DGRNITVNEAQSRR 86
>gi|242063480|ref|XP_002453029.1| hypothetical protein SORBIDRAFT_04g037020 [Sorghum bicolor]
gi|241932860|gb|EES06005.1| hypothetical protein SORBIDRAFT_04g037020 [Sorghum bicolor]
Length = 295
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 46/68 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++ T EML +AF + G V A ++ D RS+GYG+V +ST+EE +A++ +NG L
Sbjct: 222 LSWTVTSEMLTEAFGRCGNVVGARVLYDGETGRSRGYGFVCYSTKEEMDEAISSLNGTEL 281
Query: 61 DGRVIFVD 68
+GR I V+
Sbjct: 282 EGREIRVN 289
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/73 (21%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 3 FSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDG 62
++ LA ++ ++ D+ RS+G+ +VT +T ++ + + +++G L G
Sbjct: 133 YNCDSAQLAGIVQEYASPEMVEVLYDRITGRSRGFAFVTMTTVQDCELVIKNLDGSLYGG 192
Query: 63 RVI---FVDNVRP 72
R + F D +P
Sbjct: 193 RTMKVNFADRPKP 205
>gi|389744399|gb|EIM85582.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 262
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 47/68 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S TT+ L D FS+FG+V + TI+ D+ +RS+G+G++ ST EA+K + ++NG L
Sbjct: 82 LSIRTTERDLDDEFSRFGRVEKVTIVYDQRSDRSRGFGFIKMSTVAEAEKCIQELNGVDL 141
Query: 61 DGRVIFVD 68
+GR I VD
Sbjct: 142 NGRRIRVD 149
>gi|319765042|ref|YP_004128979.1| rnp-1 like RNA-binding protein [Alicycliphilus denitrificans BC]
gi|330827234|ref|YP_004390537.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans
K601]
gi|317119603|gb|ADV02092.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans BC]
gi|329312606|gb|AEB87021.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans
K601]
Length = 144
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ +S + L AF QFG VT A ++M++ RSKG+G+V ++ +AQ A+ MNG+ L
Sbjct: 10 LPYSVRDQDLEQAFGQFGVVTSAKVMMERDTGRSKGFGFVEMGSDADAQAAINGMNGQSL 69
Query: 61 DGRVIFVDNVRP 72
GR I V+ RP
Sbjct: 70 GGRSIVVNEARP 81
>gi|239611503|gb|EEQ88490.1| glycine-rich RNA-binding protein [Ajellomyces dermatitidis ER-3]
gi|327348484|gb|EGE77341.1| glycine-rich RNA-binding protein [Ajellomyces dermatitidis ATCC
18188]
Length = 143
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 46/68 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ TT E L F ++G + EAT++ D+ NRS+G+G+V F+++ EA A+ MN +
Sbjct: 9 LAWHTTDETLRVGFEKYGTIEEATVVKDRDTNRSRGFGFVRFASDTEADTAMNAMNNQEF 68
Query: 61 DGRVIFVD 68
DGRVI VD
Sbjct: 69 DGRVIRVD 76
>gi|389633057|ref|XP_003714181.1| nuclear localization sequence binding protein [Magnaporthe oryzae
70-15]
gi|351646514|gb|EHA54374.1| nuclear localization sequence binding protein [Magnaporthe oryzae
70-15]
gi|440473688|gb|ELQ42470.1| 28 kDa ribonucleoprotein [Magnaporthe oryzae Y34]
gi|440486239|gb|ELQ66126.1| 28 kDa ribonucleoprotein [Magnaporthe oryzae P131]
Length = 486
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 43/68 (63%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++ MLA+ F G VT A +I D+ RSKG+GYV F+T EEA+KA + G +
Sbjct: 246 LSWNVDDAMLAEEFKFCGTVTSARVITDRESGRSKGFGYVDFATPEEAEKAHGEKQGAFI 305
Query: 61 DGRVIFVD 68
DGR I VD
Sbjct: 306 DGREIKVD 313
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 14 FSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFVD--NVR 71
FS+ +V + ++ R KG+GYVTF++ E+A+ A +NG+ ++GR +D R
Sbjct: 362 FSEVAEVKSLRLPTEQESGRRKGFGYVTFNSVEDAKSAFEQLNGQSINGRNCRLDYSTPR 421
Query: 72 PSR 74
P R
Sbjct: 422 PPR 424
>gi|213406493|ref|XP_002174018.1| nucleolar protein [Schizosaccharomyces japonicus yFS275]
gi|212002065|gb|EEB07725.1| nucleolar protein [Schizosaccharomyces japonicus yFS275]
Length = 690
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 47/75 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++FSTT L D FS V A ++ DK +SKG+G+VTFS E+A +AL ++ K L
Sbjct: 14 LTFSTTSNDLTDFFSNAAPVKHAVVVTDKETGQSKGFGFVTFSLHEDAVRALEELKNKKL 73
Query: 61 DGRVIFVDNVRPSRR 75
DGR++ ++ P +R
Sbjct: 74 DGRILRMEFAAPRKR 88
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 14 FSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFVD 68
F++FG+V E + KG R G+ +V AQKA+ +N +DGRV+ VD
Sbjct: 129 FAKFGKVREIKVPT-KGGGRMCGFAFVWMKDRASAQKAMDTLNATEIDGRVVAVD 182
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 3 FSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKAL 52
F TT++ L F QFG + A I+ D S+G G+V F + + + L
Sbjct: 294 FETTEQALYQHFRQFGPLEYAKIVKDYATGLSQGRGFVKFRYQNDYEACL 343
>gi|119358437|ref|YP_913081.1| RNP-1 like RNA-binding protein [Chlorobium phaeobacteroides DSM
266]
gi|119355786|gb|ABL66657.1| RNP-1 like RNA-binding protein [Chlorobium phaeobacteroides DSM
266]
Length = 90
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 43/65 (66%)
Query: 3 FSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDG 62
+ T++ L DAFSQFGQV A II DK RSKG+G+V ++EA++A+ MN K L G
Sbjct: 10 YQVTEDDLRDAFSQFGQVDSANIITDKFSGRSKGFGFVDMPHDDEAREAIESMNDKDLKG 69
Query: 63 RVIFV 67
R I V
Sbjct: 70 RTIKV 74
>gi|395007942|ref|ZP_10391636.1| RRM domain-containing RNA-binding protein [Acidovorax sp. CF316]
gi|394314048|gb|EJE51000.1| RRM domain-containing RNA-binding protein [Acidovorax sp. CF316]
Length = 117
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 3 FSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDG 62
+S T L FS+FG VT A ++MD+ RSKG+G+V ++ E AQ A+ ++G +DG
Sbjct: 12 YSVTDSTLESNFSEFGNVTSAKVMMDRETGRSKGFGFVEMASAEVAQAAITGLHGMSVDG 71
Query: 63 RVIFVDNVRP 72
R I V+ RP
Sbjct: 72 RSIVVNLARP 81
>gi|57899926|dbj|BAD87838.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 203
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 43/68 (63%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T + L DAFSQ G + + +I +SKGYG+V F++E+EA AL M G+++
Sbjct: 131 LSYDTNETALKDAFSQHGHIIQVKVICHPVTGKSKGYGFVKFASEDEAAAALHKMGGEVI 190
Query: 61 DGRVIFVD 68
DGR I V
Sbjct: 191 DGRNIRVH 198
>gi|261205092|ref|XP_002627283.1| glycine-rich RNA-binding protein [Ajellomyces dermatitidis
SLH14081]
gi|239592342|gb|EEQ74923.1| glycine-rich RNA-binding protein [Ajellomyces dermatitidis
SLH14081]
Length = 143
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 46/68 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ TT E L F ++G + EAT++ D+ NRS+G+G+V F+++ EA A+ MN +
Sbjct: 9 LAWHTTDETLRVGFEKYGTIEEATVVKDRDTNRSRGFGFVRFASDTEADTAMNAMNNQEF 68
Query: 61 DGRVIFVD 68
DGRVI VD
Sbjct: 69 DGRVIRVD 76
>gi|365153971|ref|ZP_09350405.1| hypothetical protein HMPREF1019_01088 [Campylobacter sp. 10_1_50]
gi|158605004|gb|EAT99377.3| 31 kDa ribonucleoprotein, (RNA-binding proteinRNP-T) (RNA-binding
protein 1/2/3) (AtRBP33) (RNA-binding proteincp31)
[Campylobacter concisus 13826]
gi|363650683|gb|EHL89770.1| hypothetical protein HMPREF1019_01088 [Campylobacter sp. 10_1_50]
Length = 81
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ TT+ L +AF+QFG+V A I+ D+ +RSKG+G+V E QKA+ +N K L
Sbjct: 8 LSYRTTEAELKEAFAQFGEVRRAKIVKDRETDRSKGFGFVEMDDANEGQKAIDALNEKEL 67
Query: 61 DGRVIFVDNVRP 72
GR + V+ RP
Sbjct: 68 GGRTLRVNEARP 79
>gi|115454539|ref|NP_001050870.1| Os03g0670700 [Oryza sativa Japonica Group]
gi|108710321|gb|ABF98116.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
gi|113549341|dbj|BAF12784.1| Os03g0670700 [Oryza sativa Japonica Group]
Length = 196
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L AFS +G++ ++ II D+ RS+G+G+VTFS+E+ + A+ MNGK L
Sbjct: 15 LAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEGMNGKEL 74
Query: 61 DGRVIFVDNVRPSRR 75
DGR I V+ + SRR
Sbjct: 75 DGRNITVNEAQ-SRR 88
>gi|20257693|gb|AAM16012.1| glycine-rich RNA binding protein [Zea mays]
Length = 153
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 47/68 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L +AFS +G+V E+ II+D+ RS+G+G+VTFS + + A+ MNGK L
Sbjct: 22 LAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXDAMRSAIEGMNGKEL 81
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 82 DGRNITVN 89
>gi|357111298|ref|XP_003557451.1| PREDICTED: uncharacterized protein LOC100823909 [Brachypodium
distachyon]
Length = 258
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ TT+ L AFS FG+V E ++ ++ RS+G+G+VTFS A A+ +M+ L
Sbjct: 14 LSWDTTERTLERAFSDFGKVIETQVVTERDTGRSRGFGFVTFSEPRAADAAIREMHNGEL 73
Query: 61 DGRVIFVDNVRPSRRYNTD 79
DGR I V+ +P R NTD
Sbjct: 74 DGRTISVNKAQP--RMNTD 90
>gi|20257697|gb|AAM16014.1| glycine-rich RNA binding protein [Zea mays]
Length = 148
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L +AFS +G+V E+ II+D+ RS+G+G+VTFS + A+ MNGK L
Sbjct: 18 LAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXXXRSAIEGMNGKEL 77
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 78 DGRNITVN 85
>gi|15822705|gb|AAL07519.1| RNA-binding protein precursor [Solanum tuberosum]
Length = 339
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 49/75 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T + L + FSQ+G+V EA +I+D+ RS+G+G+++F + EEA A+ M+G+ L
Sbjct: 47 LSYGTDESSLKETFSQYGEVIEARVILDRETGRSRGFGFISFPSSEEATSAMQAMDGQDL 106
Query: 61 DGRVIFVDNVRPSRR 75
GR I V+ RR
Sbjct: 107 HGRRIKVNYATEKRR 121
>gi|339626955|ref|YP_004718598.1| RNP-1 like RNA-binding protein [Sulfobacillus acidophilus TPY]
gi|379008663|ref|YP_005258114.1| RNP-1 like RNA-binding protein [Sulfobacillus acidophilus DSM
10332]
gi|339284744|gb|AEJ38855.1| RNP-1 like RNA-binding protein [Sulfobacillus acidophilus TPY]
gi|361054925|gb|AEW06442.1| RNP-1 like RNA-binding protein [Sulfobacillus acidophilus DSM
10332]
Length = 85
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++STT+E LA AF+Q QV A II D+ RS+G+G+V + +++A++A+ MNG L
Sbjct: 10 LAWSTTEEELAQAFAQHAQVISARIITDRETGRSRGFGFVEVA-DQDAEQAVEAMNGTQL 68
Query: 61 DGRVIFVDNVRPSR-RY 76
GR I V+ RP + RY
Sbjct: 69 GGRDIIVNEARPRQSRY 85
>gi|145298735|ref|YP_001141576.1| RNA-binding protein [Aeromonas salmonicida subsp. salmonicida
A449]
gi|142851507|gb|ABO89828.1| RNA-binding protein [Aeromonas salmonicida subsp. salmonicida
A449]
Length = 92
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 6/88 (6%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T + L FSQFGQV + II+D+ +SKG+G++ +A+KA+A ++G +
Sbjct: 8 LSYRMTADELTTVFSQFGQVDKVDIIIDRDTGQSKGFGFIEMPVNGDAEKAIAGLHGTEI 67
Query: 61 DGRVIFVDNVRPSRRYNTDAPLARQLPQ 88
GR I V+ +P TDAP R PQ
Sbjct: 68 GGRTITVNQAKP----KTDAPRGR--PQ 89
>gi|356541091|ref|XP_003539016.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 207
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 48/68 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T + L AFSQ+G++ E II D+ RS+G+G+VTF++E+ + A+ MNG+ L
Sbjct: 51 LAWATDDQALERAFSQYGEIVETKIINDRETGRSRGFGFVTFASEQSMKDAIEGMNGQNL 110
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 111 DGRNITVN 118
>gi|367006051|ref|XP_003687757.1| hypothetical protein TPHA_0K01910 [Tetrapisispora phaffii CBS 4417]
gi|357526062|emb|CCE65323.1| hypothetical protein TPHA_0K01910 [Tetrapisispora phaffii CBS 4417]
Length = 416
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 45/68 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+S E L + F G V A +++++G +RS+GYGYV FS + A+KA+ +M+GK +
Sbjct: 164 LSWSIDDEWLKNEFDHIGGVIGARVMLERGTDRSRGYGYVDFSDKSYAEKAIKEMHGKEI 223
Query: 61 DGRVIFVD 68
DGR I D
Sbjct: 224 DGREINCD 231
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 41/72 (56%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF+ ++ + + FS+FG++ + + KG+GYV + ++A+KAL + G+ +
Sbjct: 266 LSFNADRDSIWEMFSKFGEIVSVRLPTHPETEQPKGFGYVQYGNIDDAKKALEALQGEYI 325
Query: 61 DGRVIFVDNVRP 72
D R + +D P
Sbjct: 326 DNRPVRLDYSTP 337
>gi|148695099|gb|EDL27046.1| mCG129611 [Mus musculus]
Length = 172
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F+T ++ L + FS FG ++E ++ D+ RS G+G++TF+ E A A+ MNG+ L
Sbjct: 32 LNFNTHEQALENYFSSFGPISEVVVVKDRETQRSWGFGFITFTNPEHASDAMRAMNGESL 91
Query: 61 DGRVIFVDNVRPSRR 75
DGR I VD+ S R
Sbjct: 92 DGRQIRVDHAGKSAR 106
>gi|398810631|ref|ZP_10569445.1| RRM domain-containing RNA-binding protein [Variovorax sp. CF313]
gi|398082488|gb|EJL73237.1| RRM domain-containing RNA-binding protein [Variovorax sp. CF313]
Length = 179
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 41/63 (65%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFVDN 69
L AF QFG VT A ++M++ RSKG+G+V ++ EAQ A+ MNG+ L GR + V+
Sbjct: 19 LEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAINGMNGQPLGGRSVVVNE 78
Query: 70 VRP 72
RP
Sbjct: 79 ARP 81
>gi|319796634|ref|YP_004158274.1| rnp-1 like RNA-binding protein [Variovorax paradoxus EPS]
gi|315599097|gb|ADU40163.1| RNP-1 like RNA-binding protein [Variovorax paradoxus EPS]
Length = 189
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 41/63 (65%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFVDN 69
L AF QFG VT A ++M++ RSKG+G+V ++ EAQ A+ MNG+ L GR + V+
Sbjct: 19 LEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAINGMNGQPLGGRSVVVNE 78
Query: 70 VRP 72
RP
Sbjct: 79 ARP 81
>gi|221069836|ref|ZP_03545941.1| RNP-1 like RNA-binding protein [Comamonas testosteroni KF-1]
gi|220714859|gb|EED70227.1| RNP-1 like RNA-binding protein [Comamonas testosteroni KF-1]
Length = 158
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 41/63 (65%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFVDN 69
L AF QFG V A ++M++ RSKG+G+V ++E EAQ A+ MNG+ L GR + V+
Sbjct: 19 LEQAFGQFGAVASARVMMERDTGRSKGFGFVEMASEAEAQAAIQGMNGQPLGGRSLVVNE 78
Query: 70 VRP 72
RP
Sbjct: 79 ARP 81
>gi|115441831|ref|NP_001045195.1| Os01g0916600 [Oryza sativa Japonica Group]
gi|2624328|emb|CAA05729.1| OsGRP2 [Oryza sativa Japonica Group]
gi|19386753|dbj|BAB86134.1| OsGRP2 [Oryza sativa Japonica Group]
gi|20805007|dbj|BAB92683.1| OsGRP2 [Oryza sativa Japonica Group]
gi|113534726|dbj|BAF07109.1| Os01g0916600 [Oryza sativa Japonica Group]
gi|125528847|gb|EAY76961.1| hypothetical protein OsI_04919 [Oryza sativa Indica Group]
gi|125573102|gb|EAZ14617.1| hypothetical protein OsJ_04542 [Oryza sativa Japonica Group]
gi|215765299|dbj|BAG86996.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768370|dbj|BAH00599.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 150
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++T + L +AF+ FG VTEA +I D+ RS+G+G+V+F+ ++A+ A+ M+GK L
Sbjct: 44 LSWNTNDDSLKEAFTSFGDVTEARVINDRESGRSRGFGFVSFANGDDAKSAMDAMDGKEL 103
Query: 61 DGRVIFVD--NVRP 72
+GR I V+ N RP
Sbjct: 104 EGRSIRVNFANERP 117
>gi|115481496|ref|NP_001064341.1| Os10g0321700 [Oryza sativa Japonica Group]
gi|110288867|gb|ABG66004.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113638950|dbj|BAF26255.1| Os10g0321700 [Oryza sativa Japonica Group]
Length = 317
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 48/67 (71%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T + L +AF+ +G+V EA +I+D+ RS+G+G+VT+++ +EA A+ M+GK L
Sbjct: 38 ISYGTDDQSLKEAFANYGEVIEARVIVDRTTGRSRGFGFVTYTSTDEAAAAITGMDGKDL 97
Query: 61 DGRVIFV 67
GR++ V
Sbjct: 98 QGRIVRV 104
>gi|443919574|gb|ELU39701.1| RNA recognition motif domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 716
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++ + LA F G V A + MD+ +S+G+ YV FS+ EAQKA+ +MNGK +
Sbjct: 117 LSWNVDNDWLAQEFQGCGTVVAARVQMDRNSGKSRGFAYVEFSSPAEAQKAVEEMNGKQI 176
Query: 61 DGRVIFVDNVRP 72
DGR + VD +P
Sbjct: 177 DGREVNVDISQP 188
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++TT++ L AF +FG VT + D+ + KG+GYV F +E A KA M GK L
Sbjct: 216 LSWNTTEDGLWTAFGEFGDVTHVRLPTDQESGKPKGFGYVEFGDQEGATKAYEAMKGKDL 275
Query: 61 DGRVIFVDNVRP 72
DGR + +D +P
Sbjct: 276 DGRTLRLDYSQP 287
>gi|343958808|dbj|BAK63259.1| cold-inducible RNA-binding protein [Pan troglodytes]
Length = 225
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 47/73 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+G G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGSGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|223973531|gb|ACN30953.1| unknown [Zea mays]
Length = 184
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 48/67 (71%), Gaps = 2/67 (2%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFVD- 68
L +AFS FG+VTEA +I D+ RS+G+G+V +S + A++A++ M+GK +DGR + V+
Sbjct: 53 LREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNM 112
Query: 69 -NVRPSR 74
N RP R
Sbjct: 113 ANERPLR 119
>gi|91786529|ref|YP_547481.1| RNA recognition motif-containing protein [Polaromonas sp. JS666]
gi|91695754|gb|ABE42583.1| RNA-binding region RNP-1 (RNA recognition motif) [Polaromonas sp.
JS666]
Length = 134
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ ++ E L +F FG +T A ++M++ RSKG+G+V ++ EAQ A+A MNG+ L
Sbjct: 10 LPYTVRDEDLQQSFGAFGSITSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIAGMNGQSL 69
Query: 61 DGRVIFVDNVRP 72
GR I V+ RP
Sbjct: 70 GGRSITVNEARP 81
>gi|398803602|ref|ZP_10562623.1| RRM domain-containing RNA-binding protein [Polaromonas sp. CF318]
gi|398096229|gb|EJL86556.1| RRM domain-containing RNA-binding protein [Polaromonas sp. CF318]
Length = 133
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ ++ E L +F FG +T A ++M++ RSKG+G+V ++ EAQ A+A MNG+ L
Sbjct: 10 LPYTVRDEDLQQSFGAFGSITSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIAGMNGQSL 69
Query: 61 DGRVIFVDNVRP 72
GR I V+ RP
Sbjct: 70 GGRSITVNEARP 81
>gi|328850756|gb|EGF99917.1| hypothetical protein MELLADRAFT_118186 [Melampsora larici-populina
98AG31]
Length = 667
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++ + L F +FG+V A +I ++G RSKG+GYV F++ E+A+KA+ M G +
Sbjct: 408 LSWNVDDDWLKKEFEKFGEVISARVITERGTERSKGFGYVDFASPEDARKAVEAMAGTEI 467
Query: 61 DGRVIFVDNVRP 72
DGR I VD P
Sbjct: 468 DGRTINVDFSAP 479
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKA--LADMNGK 58
+ FS T++ + +AFS++G + + D R KG+GYV F+T+E A A + +G
Sbjct: 508 LPFSATQDSVYEAFSEYGDINSVRLPTDPETERIKGFGYVEFATQEAATAAVNVGRGDGI 567
Query: 59 LLDGRVIFVDNVRP 72
+D R +D +P
Sbjct: 568 YIDQRQARLDYSQP 581
>gi|392404677|ref|YP_006441289.1| RNP-1 like RNA-binding protein [Turneriella parva DSM 21527]
gi|390612631|gb|AFM13783.1| RNP-1 like RNA-binding protein [Turneriella parva DSM 21527]
Length = 141
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 44/72 (61%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++ T E L AF FGQVT I+ D+ RS+G+ +V E AQ A+A+MNGK L
Sbjct: 8 LAYNATDEELRSAFEAFGQVTSVKIVRDRDTGRSRGFAFVEMEDGEGAQNAVAEMNGKDL 67
Query: 61 DGRVIFVDNVRP 72
GR + V+ RP
Sbjct: 68 KGRNLVVNEARP 79
>gi|799015|emb|CAA89058.1| putative glycine rich RNA binding protein [Solanum tuberosum]
Length = 175
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 48/68 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++TT + L+DAFSQ+ +V E+ II D+ RS+G+G+VTF E+ + A+ MN + L
Sbjct: 13 LAWATTDQTLSDAFSQYAEVVESKIINDRETGRSRGFGFVTFKDEQAMRDAIEGMNRQDL 72
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 73 DGRNITVN 80
>gi|440714448|ref|ZP_20895027.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SWK14]
gi|436440644|gb|ELP33948.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SWK14]
Length = 196
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T+E L AF Q+G+V+ IIMD+ RS+G+ +V + E A+ A+ ++NG +
Sbjct: 62 LSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIENLNGHEI 121
Query: 61 DGRVIFVDNVRP 72
DGR + V+ RP
Sbjct: 122 DGRSVTVNEARP 133
>gi|169772913|ref|XP_001820925.1| glycine-rich RNA-binding protein 2 [Aspergillus oryzae RIB40]
gi|238490830|ref|XP_002376652.1| heterogeneous nuclear ribonucleoprotein G, putative [Aspergillus
flavus NRRL3357]
gi|83768786|dbj|BAE58923.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220697065|gb|EED53406.1| heterogeneous nuclear ribonucleoprotein G, putative [Aspergillus
flavus NRRL3357]
Length = 125
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++T E L FS+FG V +A ++ D+ RS+G+G+VTFS + EA A+ +N + L
Sbjct: 11 LSWNTNDESLRQTFSEFGNVLDAIVMKDRETGRSRGFGFVTFSAQTEADAAIGGLNEQEL 70
Query: 61 DGRVIFVD--NVRPS 73
DGR I V+ N RP+
Sbjct: 71 DGRRIRVNLANARPA 85
>gi|421614043|ref|ZP_16055112.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SH28]
gi|408495250|gb|EKJ99839.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SH28]
Length = 189
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T+E L AF Q+G+V+ IIMD+ RS+G+ +V + E A+ A+ ++NG +
Sbjct: 62 LSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIENLNGHEI 121
Query: 61 DGRVIFVDNVRP 72
DGR + V+ RP
Sbjct: 122 DGRSVTVNEARP 133
>gi|373854326|ref|ZP_09597124.1| RNP-1 like RNA-binding protein [Opitutaceae bacterium TAV5]
gi|391231688|ref|ZP_10267894.1| RRM domain-containing RNA-binding protein [Opitutaceae bacterium
TAV1]
gi|372472193|gb|EHP32205.1| RNP-1 like RNA-binding protein [Opitutaceae bacterium TAV5]
gi|391221349|gb|EIP99769.1| RRM domain-containing RNA-binding protein [Opitutaceae bacterium
TAV1]
Length = 122
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 45/72 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T+++ L AF QFG VT+ + MDK R +G+ +VT ST EEA+ A +NG L
Sbjct: 11 MSFKTSEDELRSAFGQFGNVTDVYVAMDKMTGRPRGFAFVTMSTPEEAKIAAEKLNGVDL 70
Query: 61 DGRVIFVDNVRP 72
GR + V+ RP
Sbjct: 71 GGRALTVNEARP 82
>gi|417304381|ref|ZP_12091404.1| protein containing RNA recognition motif, RNP-1 domains
[Rhodopirellula baltica WH47]
gi|449136828|ref|ZP_21772190.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula europaea 6C]
gi|327539333|gb|EGF25954.1| protein containing RNA recognition motif, RNP-1 domains
[Rhodopirellula baltica WH47]
gi|448884533|gb|EMB15023.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula europaea 6C]
Length = 195
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T+E L AF Q+G+V+ IIMD+ RS+G+ +V + E A+ A+ ++NG +
Sbjct: 62 LSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIENLNGHEI 121
Query: 61 DGRVIFVDNVRP 72
DGR + V+ RP
Sbjct: 122 DGRSVTVNEARP 133
>gi|242015973|ref|XP_002428613.1| RNA-binding region-containing protein, putative [Pediculus humanus
corporis]
gi|212513276|gb|EEB15875.1| RNA-binding region-containing protein, putative [Pediculus humanus
corporis]
Length = 593
Score = 64.7 bits (156), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ +IMD RSKGYG++TF + ++A+KAL +NG L
Sbjct: 272 LHFNITEDMLRGIFEPFGKIDSIQLIMDPETGRSKGYGFITFHSADDAKKALEQLNGFEL 331
Query: 61 DGRVIFVDNV 70
GR + V NV
Sbjct: 332 AGRPMKVGNV 341
>gi|148231554|ref|NP_001080069.1| cold-inducible RNA-binding protein A [Xenopus laevis]
gi|284018072|sp|O93235.2|CIRBA_XENLA RecName: Full=Cold-inducible RNA-binding protein A; AltName:
Full=Cold-inducible RNA-binding protein; Short=XCIRP;
AltName: Full=Cold-inducible RNA-binding protein 1;
Short=XCIRP-1; AltName: Full=Glycine-rich RNA-binding
protein CIRP-A
gi|27735413|gb|AAH41204.1| Cirbp-prov protein [Xenopus laevis]
Length = 166
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 49/73 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F T ++ L AF+++G+++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 12 LNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMAMNGKSV 71
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 72 DGRQIRVDQAGKS 84
>gi|449441097|ref|XP_004138320.1| PREDICTED: uncharacterized protein LOC101218446 [Cucumis sativus]
Length = 232
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 50/68 (73%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SFST + L +AF+++G+V EA +I+D+ RS+G+G+VT+++ EEA A+ ++G+ L
Sbjct: 50 ISFSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDL 109
Query: 61 DGRVIFVD 68
GR + V+
Sbjct: 110 HGRRVRVN 117
>gi|118788821|ref|XP_317010.3| AGAP008433-PA [Anopheles gambiae str. PEST]
gi|116122929|gb|EAA12873.4| AGAP008433-PA [Anopheles gambiae str. PEST]
Length = 526
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ +IMD RSKGYG++TF ++A+KAL +NG L
Sbjct: 276 LHFNITEDMLNGIFEPFGKIDNIQLIMDADTGRSKGYGFITFHNADDAKKALEQLNGFEL 335
Query: 61 DGRVIFVDNV 70
GR + V NV
Sbjct: 336 AGRPMKVGNV 345
>gi|334705246|ref|ZP_08521112.1| RNA-binding protein [Aeromonas caviae Ae398]
Length = 81
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 6 TKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVI 65
T + L FSQFGQV + II+D+ +SKG+G++ EA+KA+A+++G + GR I
Sbjct: 2 TADELTTVFSQFGQVDKVDIIIDRDTGQSKGFGFIEMPVNGEAEKAIAELHGTEVGGRTI 61
Query: 66 FVDNVRPSRRYNTDAPLAR 84
V+ +P TDAP R
Sbjct: 62 TVNQAKP----KTDAPRGR 76
>gi|218193471|gb|EEC75898.1| hypothetical protein OsI_12955 [Oryza sativa Indica Group]
Length = 139
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 49/74 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L AFS +G++ ++ II D+ RS+G+G+VTFS+E+ + A+ MNGK L
Sbjct: 15 LAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEGMNGKEL 74
Query: 61 DGRVIFVDNVRPSR 74
DGR I V+ + R
Sbjct: 75 DGRNITVNEAQSRR 88
>gi|449507141|ref|XP_004162944.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like [Cucumis
sativus]
Length = 175
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 43/58 (74%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGK 58
+SF TT+E L +AF FGQ+ E ++MD+ NR +G+ ++ +++EEE+QKA+ M+GK
Sbjct: 96 LSFRTTEESLRNAFKSFGQLVEVNLVMDRLANRPRGFAFLRYASEEESQKAIEGMHGK 153
>gi|32476441|ref|NP_869435.1| RNA-binding protein [Rhodopirellula baltica SH 1]
gi|32446986|emb|CAD78892.1| RNA-binding protein [Rhodopirellula baltica SH 1]
Length = 206
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T+E L AF Q+G+V+ IIMD+ RS+G+ +V + E A+ A+ ++NG +
Sbjct: 73 LSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIENLNGHEI 132
Query: 61 DGRVIFVDNVRP 72
DGR + V+ RP
Sbjct: 133 DGRSVTVNEARP 144
>gi|357465579|ref|XP_003603074.1| Poly(A)-binding protein [Medicago truncatula]
gi|355492122|gb|AES73325.1| Poly(A)-binding protein [Medicago truncatula]
Length = 622
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 57/104 (54%), Gaps = 22/104 (21%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S T E L++ FS+FG VT I+ D + S+G G+V FST EEA +ALA+MNGK++ G+
Sbjct: 316 SVTDEKLSELFSEFGTVTSCKILRDP-QGISRGSGFVAFSTPEEATRALAEMNGKMVAGK 374
Query: 64 VIFV-----------------DNVRPSRRYNTDAPLARQLPQSP 90
++V VRP T AP+A +LP P
Sbjct: 375 PLYVAPAQKKEERKARLQAQFSQVRPV----TMAPIAPRLPFYP 414
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFVDN 69
L D FS FG + I MD SKGYG+V F EE AQ A+ +NG LL+ + ++V +
Sbjct: 128 LYDTFSIFGNILSCKIAMD-ASGLSKGYGFVQFENEESAQSAIDKLNGMLLNDKPVYVGH 186
Query: 70 VR 71
+
Sbjct: 187 FQ 188
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 31/61 (50%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
T L D F+Q GQV I D +S GYGYV FS +A KA+ +N L+ +
Sbjct: 35 VTDSQLYDLFNQIGQVVSVRICRDLASQQSLGYGYVNFSNPHDAAKAMDVLNFTPLNNKP 94
Query: 65 I 65
I
Sbjct: 95 I 95
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S S T + L + F ++G +T A ++ D +SK +G+V F + A +A+ +NGK
Sbjct: 210 LSESVTDDDLKNTFGEYGTITSAVVMRDV-DGKSKCFGFVNFENADAAAEAVEALNGKKF 268
Query: 61 DGRVIFV 67
D + +V
Sbjct: 269 DDKEWYV 275
>gi|194334049|ref|YP_002015909.1| RNP-1 like RNA-binding protein [Prosthecochloris aestuarii DSM
271]
gi|194311867|gb|ACF46262.1| RNP-1 like RNA-binding protein [Prosthecochloris aestuarii DSM
271]
Length = 90
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 5/81 (6%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ + T+E L +AF +FG V+ A II DK RSKG+G+V S+ ++A +A+ +N L
Sbjct: 8 LDYGVTEEDLREAFGEFGDVSSANIITDKFTGRSKGFGFVEMSSSDDANEAIESLNDTDL 67
Query: 61 DGRVIFVDNV-----RPSRRY 76
+GR I V+ RP+RRY
Sbjct: 68 NGRTIKVNEAKPRAERPARRY 88
>gi|212550891|ref|YP_002309208.1| RNA-binding protein RbpA [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212549129|dbj|BAG83797.1| putative RNA-binding protein RbpA [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 98
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF + L + F +G V+ A +I+D+ +RSKGYG+V +EEA+KA+A++NG
Sbjct: 8 LSFRLNDDDLKNLFESYGTVSSARVIIDRQTSRSKGYGFVEMEDDEEARKAIAELNGSEF 67
Query: 61 DGRVIFVDNVRP 72
D R I V RP
Sbjct: 68 DERTISVSEARP 79
>gi|4455315|emb|CAB36850.1| RNA-binding protein like [Arabidopsis thaliana]
gi|7268090|emb|CAB78428.1| RNA-binding protein like [Arabidopsis thaliana]
Length = 126
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 50/67 (74%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S +TT +ML +AFS +G V +A ++ D+ +RS+G+G+VT+S+ EA+ A++ M+GK L
Sbjct: 49 LSPTTTDDMLREAFSGYGNVVDAIVMRDRYTDRSRGFGFVTYSSHSEAEAAVSGMDGKEL 108
Query: 61 DGRVIFV 67
+GR + V
Sbjct: 109 NGRRVSV 115
>gi|20257701|gb|AAM16016.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L +AFS +G+V E+ II+D+ RS+G+G+VTFS + A+ MNGK L
Sbjct: 24 LAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXXXRSAIEGMNGKEL 83
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 84 DGRNITVN 91
>gi|449477140|ref|XP_004154942.1| PREDICTED: uncharacterized LOC101218446 [Cucumis sativus]
Length = 287
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 50/68 (73%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SFST + L +AF+++G+V EA +I+D+ RS+G+G+VT+++ EEA A+ ++G+ L
Sbjct: 50 ISFSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDL 109
Query: 61 DGRVIFVD 68
GR + V+
Sbjct: 110 HGRRVRVN 117
>gi|22328599|ref|NP_193122.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|48310472|gb|AAT41827.1| At4g13860 [Arabidopsis thaliana]
gi|332657937|gb|AEE83337.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 87
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
+TT +ML +AFS +G V +A ++ D+ +RS+G+G+VT+S+ EA+ A++ M+GK L+GR
Sbjct: 13 TTTDDMLREAFSGYGNVVDAIVMRDRYTDRSRGFGFVTYSSHSEAEAAVSGMDGKELNGR 72
Query: 64 VIFV 67
+ V
Sbjct: 73 RVSV 76
>gi|449439247|ref|XP_004137398.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like-B-like
[Cucumis sativus]
Length = 170
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 43/58 (74%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGK 58
+SF TT+E L +AF FGQ+ E ++MD+ NR +G+ ++ +++EEE+QKA+ M+GK
Sbjct: 96 LSFRTTEESLRNAFKSFGQLVEVNLVMDRLANRPRGFAFLRYASEEESQKAIEGMHGK 153
>gi|7439974|pir||JC6571 cold-inducible RNA-binding protein homolog - clawed frog
gi|3341887|dbj|BAA31861.1| cold-inducible RNA binding protein [Xenopus laevis]
Length = 163
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 49/73 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F T ++ L AF+++G+++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 12 LNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMAMNGKSV 71
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 72 DGRQIRVDQAGKS 84
>gi|421497038|ref|ZP_15944229.1| RNA-binding protein [Aeromonas media WS]
gi|407183931|gb|EKE57797.1| RNA-binding protein [Aeromonas media WS]
Length = 81
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 4/79 (5%)
Query: 6 TKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVI 65
T + L + FSQFGQV + II+D+ +SKG+G++ +A+KA+A+++G + GR I
Sbjct: 2 TADELTNVFSQFGQVDKVDIIIDRDTGQSKGFGFIEMPVNGDAEKAIAELHGTEIGGRTI 61
Query: 66 FVDNVRPSRRYNTDAPLAR 84
V+ +P TDAP R
Sbjct: 62 TVNQAKPK----TDAPRGR 76
>gi|217074874|gb|ACJ85797.1| unknown [Medicago truncatula]
Length = 494
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 57/104 (54%), Gaps = 22/104 (21%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S T E L++ FS+FG VT I+ D + S+G G+V FST EEA +ALA+MNGK++ G+
Sbjct: 316 SVTDEKLSELFSEFGTVTSCKILRDP-QGISRGSGFVAFSTPEEATRALAEMNGKMVAGK 374
Query: 64 VIFV-----------------DNVRPSRRYNTDAPLARQLPQSP 90
++V VRP T AP+A +LP P
Sbjct: 375 PLYVAPAQKKEERKARLPAQFSQVRPV----TMAPIAPRLPFYP 414
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFVDN 69
L D FS FG + I MD SKGYG+V F EE AQ A+ +NG LL+ + ++V +
Sbjct: 128 LYDTFSIFGNILSCKIAMD-ASGLSKGYGFVQFENEESAQSAIDKLNGMLLNDKPVYVGH 186
Query: 70 VRPSRRYNTDAPLA 83
+ R+ + D L+
Sbjct: 187 FQ--RKQDRDNALS 198
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 31/61 (50%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
T L D F+Q GQV I D +S GYGYV FS +A KA+ +N L+ +
Sbjct: 35 VTDSQLYDLFNQIGQVVSVRICRDLASQQSLGYGYVNFSNPHDAAKAMDVLNFTPLNNKP 94
Query: 65 I 65
I
Sbjct: 95 I 95
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S S T + L + F ++G +T A ++ D +SK +G+V F + A +A+ +NGK
Sbjct: 210 LSESVTDDDLKNTFGEYGTITSAVVMRDV-DGKSKCFGFVNFENADAAAEAVEALNGKKF 268
Query: 61 DGRVIFVDNVRPSRRYNTDAPLARQLPQSPEE 92
D + +V + ++Y + L + QS +E
Sbjct: 269 DDKEWYVG--KALKKYERELELKERHEQSMKE 298
>gi|20257681|gb|AAM16006.1| glycine-rich RNA binding protein [Zea mays]
Length = 148
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L +AFS +G+V E+ II+D+ RS+G+G+VTFS + A+ MNGK L
Sbjct: 18 LAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXAMRSAIEGMNGKEL 77
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 78 DGRNITVN 85
>gi|75319742|sp|Q43472.1|GRP_HORVU RecName: Full=Glycine-rich RNA-binding protein blt801; AltName:
Full=Low temperature-responsive RNA-binding protein
gi|1229138|gb|AAB07749.1| low temperature-responsive RNA-binding protein [Hordeum vulgare
subsp. vulgare]
Length = 161
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 51/74 (68%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ ++T + L +AFS++G V ++ II D+ RS+G+G+VTF+++E ++A+ MNG+ L
Sbjct: 13 LRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 72
Query: 61 DGRVIFVDNVRPSR 74
DGR I V+ + R
Sbjct: 73 DGRNITVNEAQSRR 86
>gi|406917506|gb|EKD56278.1| RNA-binding protein [uncultured bacterium]
Length = 89
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 47/75 (62%)
Query: 3 FSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDG 62
+S T + L + F+ G+V +A +I DK RSKG+G+VT + A+KA+ D +GK +DG
Sbjct: 14 YSATSDSLKELFAGSGEVVDAVVISDKFSGRSKGFGFVTMKDDAAAEKAIKDTDGKEVDG 73
Query: 63 RVIFVDNVRPSRRYN 77
R I V+ RP R N
Sbjct: 74 RNIKVNIARPMRENN 88
>gi|2293480|gb|AAB65412.1| glycine-rich protein [Oryza sativa Indica Group]
Length = 161
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 47/68 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L AFS +G++ E+ II D+ RS+G+G+VTFS+E+ + A+ MNGK L
Sbjct: 15 LAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGKEL 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRNITVN 82
>gi|168036414|ref|XP_001770702.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678063|gb|EDQ64526.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 165
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++TT + L + F FG V EA +I+DK S+G+G+V F E ++A+ ++GK L
Sbjct: 14 LSWNTTDKGLEEEFRHFGNVLEAKVIVDKETGHSRGFGFVNFGDERSMEEAIERLHGKEL 73
Query: 61 DGRVIFVDNVRP 72
DGR I V+ +P
Sbjct: 74 DGRPITVNRAKP 85
>gi|157108428|ref|XP_001650224.1| splicing factor [Aedes aegypti]
gi|108879330|gb|EAT43555.1| AAEL005046-PA [Aedes aegypti]
Length = 544
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ +IMD RSKGYG++TF ++A+KAL +NG L
Sbjct: 294 LHFNITEDMLRGIFEPFGKIDNIQLIMDSDTGRSKGYGFITFHNADDAKKALEQLNGFEL 353
Query: 61 DGRVIFVDNV 70
GR + V NV
Sbjct: 354 AGRPMKVGNV 363
>gi|302496006|ref|XP_003010008.1| hypothetical protein ARB_03747 [Arthroderma benhamiae CBS 112371]
gi|291173542|gb|EFE29368.1| hypothetical protein ARB_03747 [Arthroderma benhamiae CBS 112371]
Length = 224
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 6/74 (8%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATI------IMDKGKNRSKGYGYVTFSTEEEAQKALAD 54
+++ TT + L + FS+FG + EA I + D+ NRS+G+G+V FS++ EA AL
Sbjct: 80 LAWHTTDDTLREGFSKFGTIEEALISHVQIVVKDRDTNRSRGFGFVRFSSDSEADAALTA 139
Query: 55 MNGKLLDGRVIFVD 68
MN + DGRVI VD
Sbjct: 140 MNNQEFDGRVIRVD 153
>gi|469071|dbj|BAA03742.1| RNA-binding glycine-rich protein-1b [Nicotiana sylvestris]
gi|295393565|gb|ADG03638.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 148
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 48/72 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++TT LADAF +G+V ++ II D+ RS+G+G+VTF E+ + A+ MNG+ L
Sbjct: 13 LAWATTDRTLADAFGTYGEVLDSKIINDRETGRSRGFGFVTFKDEKCMRDAIEGMNGQEL 72
Query: 61 DGRVIFVDNVRP 72
DGR I V+ +
Sbjct: 73 DGRSITVNEAQA 84
>gi|121607153|ref|YP_994960.1| RNP-1 like RNA-binding protein [Verminephrobacter eiseniae
EF01-2]
gi|121551793|gb|ABM55942.1| RNP-1 like RNA-binding protein [Verminephrobacter eiseniae
EF01-2]
Length = 175
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ +S L AF QFG V A ++M++ RSKG+G+V ++ EAQ A+ MNG+ L
Sbjct: 10 LPYSVRDGDLEQAFGQFGAVASAKVMMERDTGRSKGFGFVEMGSDAEAQAAINGMNGQPL 69
Query: 61 DGRVIFVDNVRP 72
GR I V+ RP
Sbjct: 70 GGRSIVVNEARP 81
>gi|392593257|gb|EIW82582.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 136
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ST + L +AF ++G VT++ ++ D+ RS+G+G+VTF+T EEA A+ M+ L
Sbjct: 10 LSWSTGDDGLRNAFGRYGAVTDSIVMRDRETGRSRGFGFVTFTTAEEANAAMGQMDQTEL 69
Query: 61 DGRVIFVD--NVRP 72
DGR I V+ N +P
Sbjct: 70 DGRTIRVNVANAKP 83
>gi|367015628|ref|XP_003682313.1| hypothetical protein TDEL_0F02910 [Torulaspora delbrueckii]
gi|359749975|emb|CCE93102.1| hypothetical protein TDEL_0F02910 [Torulaspora delbrueckii]
Length = 436
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 43/68 (63%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+S E L + F G V A +I ++G +RS+GYGYV F + A+KA+ +M+GK +
Sbjct: 194 LSWSIDDEWLKNEFDHIGGVVSARVIYERGTDRSRGYGYVDFEDKSYAEKAVKEMHGKEI 253
Query: 61 DGRVIFVD 68
DGR I D
Sbjct: 254 DGRPINCD 261
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 41/72 (56%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF+ ++ + + FS+FG++ I + KG+GYV + ++A+KAL + G+ +
Sbjct: 295 LSFNADRDNIYEMFSKFGEIVSVRIPTHPETEQPKGFGYVQYGNVDDAKKALDALQGEYI 354
Query: 61 DGRVIFVDNVRP 72
D R + +D P
Sbjct: 355 DNRPVRLDYSTP 366
>gi|170058744|ref|XP_001865056.1| splicing factor [Culex quinquefasciatus]
gi|167877732|gb|EDS41115.1| splicing factor [Culex quinquefasciatus]
Length = 546
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ +IMD RSKGYG++TF ++A+KAL +NG L
Sbjct: 296 LHFNITEDMLRGIFEPFGKIDNIQLIMDSDTGRSKGYGFITFHNADDAKKALEQLNGFEL 355
Query: 61 DGRVIFVDNV 70
GR + V NV
Sbjct: 356 AGRPMKVGNV 365
>gi|20257709|gb|AAM16020.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L +AFS +G+V E+ II+D+ RS+G+G+VTFS + A+ MNGK L
Sbjct: 24 LAWATDXHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXAMRSAIEGMNGKEL 83
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 84 DGRNITVN 91
>gi|170071297|ref|XP_001869868.1| splicing factor [Culex quinquefasciatus]
gi|167867202|gb|EDS30585.1| splicing factor [Culex quinquefasciatus]
Length = 524
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ +IMD RSKGYG++TF ++A+KAL +NG L
Sbjct: 274 LHFNITEDMLRGIFEPFGKIDNIQLIMDSDTGRSKGYGFITFHNADDAKKALEQLNGFEL 333
Query: 61 DGRVIFVDNV 70
GR + V NV
Sbjct: 334 AGRPMKVGNV 343
>gi|440789937|gb|ELR11228.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 506
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+STT E L AF ++G+V EA +I + G RS+G+G V + E +A A M+G L
Sbjct: 15 LSWSTTSETLRAAFEKYGKVEEAKVISEPGTGRSRGFGAVMYYNESDALAAYKGMHGVEL 74
Query: 61 DGRVIFVDNVR 71
+GR ++VD R
Sbjct: 75 EGRFLYVDRYR 85
>gi|406965367|gb|EKD91001.1| Glycine-rich RNA-binding protein [uncultured bacterium]
Length = 87
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 45/63 (71%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFVDN 69
L +AFS++G++ +AT++ D+ RS+G+G+V F+ + + KA+ +MNG +DGR I V+
Sbjct: 22 LREAFSKYGEIIQATVLKDRQTGRSRGFGFVEFANDADGDKAIQEMNGADMDGRNIVVNE 81
Query: 70 VRP 72
RP
Sbjct: 82 ARP 84
>gi|302757806|ref|XP_002962326.1| hypothetical protein SELMODRAFT_78193 [Selaginella
moellendorffii]
gi|300169187|gb|EFJ35789.1| hypothetical protein SELMODRAFT_78193 [Selaginella
moellendorffii]
Length = 89
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 48/68 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T+ ++ +AFS FG+V E I+ D+ +SKGYG++T+ +E +AQ AL M+GK L
Sbjct: 2 LSWGLTEGIVQEAFSSFGEVREVRIVKDRETGKSKGYGFITYVSEADAQDALQAMDGKNL 61
Query: 61 DGRVIFVD 68
+GR I V+
Sbjct: 62 NGREIRVN 69
>gi|255571962|ref|XP_002526922.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223533674|gb|EEF35409.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 166
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T+ + L +AFS +G+V E+ II D+ RS+G+G+VTF+ E+ + A+ MNG+ L
Sbjct: 15 LAWATSDKALEEAFSAYGEVLESKIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNL 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRNITVN 82
>gi|18076086|emb|CAC80549.1| glycine-rich RNA-binding protein [Ricinus communis]
Length = 165
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 49/68 (72%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T+ + L +AFS +G+V E+ II D+ RS+G+G+VTF+ E+ + A+ MNG+ L
Sbjct: 15 LAWATSDKALEEAFSAYGEVLESKIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNL 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRNITVN 82
>gi|346469013|gb|AEO34351.1| hypothetical protein [Amblyomma maculatum]
Length = 139
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 44/64 (68%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
TT E L +AF++FG+V A ++ D+ SKG+G+V ++T E+A + + M+GK LDG V
Sbjct: 47 TTTEGLREAFAKFGEVVHARVVTDRVSGYSKGFGFVKYATLEDAAEGIKGMDGKFLDGWV 106
Query: 65 IFVD 68
IF +
Sbjct: 107 IFAE 110
>gi|115384864|ref|XP_001208979.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114196671|gb|EAU38371.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 157
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 45/68 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ TT E L F +FG V A ++ D+ RS+G+G+VTF++ +EA AL ++N +
Sbjct: 36 LAWHTTDESLRAGFEKFGTVDNAIVVKDRDTGRSRGFGFVTFTSPQEADAALNELNNQEF 95
Query: 61 DGRVIFVD 68
DGR+I VD
Sbjct: 96 DGRIIRVD 103
>gi|390600853|gb|EIN10247.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 329
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S T + L D FS+FGQV + TI+ D+ RS+G+G++ +T E+A KA+ ++NG L
Sbjct: 82 LSIRTQERDLDDEFSRFGQVEKVTIVYDQRSGRSRGFGFIKMATVEDATKAIENLNGVDL 141
Query: 61 DGRVIFVD 68
+GR I VD
Sbjct: 142 NGRRIRVD 149
>gi|297263082|ref|XP_001089948.2| PREDICTED: putative RNA-binding protein 3 [Macaca mulatta]
Length = 135
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 47/75 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F+T ++ L D FS FG ++E ++ D+ RS+G+G++TF+ E A A+ MNG L
Sbjct: 13 LNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRAMNGDSL 72
Query: 61 DGRVIFVDNVRPSRR 75
DGR I V + S R
Sbjct: 73 DGRQIRVAHAGKSAR 87
>gi|427792527|gb|JAA61715.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 497
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 45/70 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T+EML F FG++ + +I D NRSKGYG++TF E+A+KAL +NG L
Sbjct: 247 LHFNITEEMLKGIFEPFGKIDKIELIKDMETNRSKGYGFITFHDSEDAKKALEQLNGFEL 306
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 307 AGRPMKVGHV 316
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFVDN 69
L + FS G+V + +IMD RSKG YV F E A+ +NG+ L G I V
Sbjct: 154 LEEFFSAVGKVRDVRLIMDNKTRRSKGIAYVEFQDVESVPLAMG-LNGQKLFGIPIVVQP 212
Query: 70 VRPSR 74
+ R
Sbjct: 213 TQAER 217
>gi|427794973|gb|JAA62938.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 509
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 45/70 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T+EML F FG++ + +I D NRSKGYG++TF E+A+KAL +NG L
Sbjct: 259 LHFNITEEMLKGIFEPFGKIDKIELIKDMETNRSKGYGFITFHDSEDAKKALEQLNGFEL 318
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 319 AGRPMKVGHV 328
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFVDN 69
L + FS G+V + +IMD RSKG YV F E A+ +NG+ L G I V
Sbjct: 166 LEEFFSAVGKVRDVRLIMDNKTRRSKGIAYVEFQDVESVPLAMG-LNGQKLFGIPIVVQP 224
Query: 70 VRPSR 74
+ R
Sbjct: 225 TQAER 229
>gi|342882418|gb|EGU83098.1| hypothetical protein FOXB_06359 [Fusarium oxysporum Fo5176]
Length = 113
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 48/67 (71%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++TT + L FS+FG+VT+A ++ D+ RS+G+G+VTFS++EEA A+ MN +
Sbjct: 9 LAWATTSDTLRAKFSEFGEVTDAIVMTDRETGRSRGFGFVTFSSQEEASAAIEAMNEQEF 68
Query: 61 DGRVIFV 67
+GR I V
Sbjct: 69 EGRQIRV 75
>gi|116787064|gb|ABK24360.1| unknown [Picea sitchensis]
Length = 365
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ T+ + L DAF Q+G++ E +IMDK +S+G+G+VTF + AQKAL + + K +
Sbjct: 76 LAWETSSQTLCDAFEQYGEIEEGAVIMDKASGKSRGFGFVTFKHMDSAQKALKEPS-KTI 134
Query: 61 DGRV 64
DGR+
Sbjct: 135 DGRI 138
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T + L + FS++G++ E ++ DK N+S+G+ +VTF T E ++AL + N K +
Sbjct: 166 LSYDTANDKLLEVFSKYGEIEEGSVAYDKNTNKSRGFAFVTFKTVEATKRALKEPN-KTI 224
Query: 61 DGRVIFV 67
DGR + V
Sbjct: 225 DGRTVTV 231
>gi|211906474|gb|ACJ11730.1| glycine-rich RNA-binding protein [Gossypium hirsutum]
Length = 168
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 48/74 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L +AFS FG++ E+ II D+ RS+G+G+VTF E+ + A+ MNG+ L
Sbjct: 15 LAWATDDRALEEAFSAFGEIVESKIINDRETGRSRGFGFVTFRDEKAMRDAIEGMNGQNL 74
Query: 61 DGRVIFVDNVRPSR 74
DGR I V+ + R
Sbjct: 75 DGRNITVNEAQSRR 88
>gi|168061382|ref|XP_001782668.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665828|gb|EDQ52499.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 82
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 46/71 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ +T+E L +F QFG+V I+ D+ S+G+G+VTFS A A+ DM+G+ +
Sbjct: 12 LSYGSTEETLKRSFMQFGEVVSVKIVHDRDSGESRGFGFVTFSNPRAATVAIQDMDGRQI 71
Query: 61 DGRVIFVDNVR 71
+GR I V+ VR
Sbjct: 72 EGRTIRVNEVR 82
>gi|115454617|ref|NP_001050909.1| Os03g0681900 [Oryza sativa Japonica Group]
gi|31712074|gb|AAP68379.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|108710427|gb|ABF98222.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113549380|dbj|BAF12823.1| Os03g0681900 [Oryza sativa Japonica Group]
gi|215692670|dbj|BAG88090.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215692827|dbj|BAG88216.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625569|gb|EEE59701.1| hypothetical protein OsJ_12125 [Oryza sativa Japonica Group]
Length = 308
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T + LADAF +FG+V +A I++++ R +G+G+VTFS E A+ +M+ + L
Sbjct: 14 LSFHTDERKLADAFRRFGKVVDAQIMLERHTQRHRGFGFVTFSDPEAVDSAIKEMHCQEL 73
Query: 61 DGRVIFVDNVRPSRRYNTD 79
DGR I V+ P + NTD
Sbjct: 74 DGRTISVNKAEP--KMNTD 90
>gi|312374824|gb|EFR22303.1| hypothetical protein AND_15459 [Anopheles darlingi]
Length = 560
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ +IMD RSKGYG++TF ++A+KAL +NG L
Sbjct: 310 LHFNITEDMLRGIFEPFGKIDNIQLIMDTDTGRSKGYGFITFHNADDAKKALEQLNGFEL 369
Query: 61 DGRVIFVDNV 70
GR + V NV
Sbjct: 370 AGRPMKVGNV 379
>gi|389741761|gb|EIM82949.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 145
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 48/68 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++TT + L AFS+FG + ++ ++ D+ RS+G+G+VTF T EEA A+ ++N + L
Sbjct: 10 LSWNTTDDTLRQAFSEFGAILDSIVMRDRETGRSRGFGFVTFGTPEEADAAINNLNEQEL 69
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 70 DGRRIRVN 77
>gi|388566786|ref|ZP_10153228.1| RNA recognition motif-containing protein [Hydrogenophaga sp. PBC]
gi|388265964|gb|EIK91512.1| RNA recognition motif-containing protein [Hydrogenophaga sp. PBC]
Length = 133
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ ++ E L AFS FG V A ++M++ RSKG+G+V ++ EAQ A+ MNG+ L
Sbjct: 10 LPYTVRDEDLQQAFSAFGAVNSAKVMMERETGRSKGFGFVEMGSDSEAQSAIQGMNGQSL 69
Query: 61 DGRVIFVDNVRP 72
GR + V+ RP
Sbjct: 70 GGRSLVVNEARP 81
>gi|357473251|ref|XP_003606910.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507965|gb|AES89107.1| Glycine-rich RNA binding protein [Medicago truncatula]
Length = 161
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 47/68 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T E L AFSQ+G++ ++ II D+ RS+G+G+VTF+ E+ A+ MNG+ L
Sbjct: 13 LAWATDNEALEKAFSQYGEIVDSKIINDRETGRSRGFGFVTFANEKSMNDAIEAMNGQDL 72
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 73 DGRNITVN 80
>gi|20257699|gb|AAM16015.1| glycine-rich RNA binding protein [Zea mays]
gi|20257705|gb|AAM16018.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L +AFS +G+V E+ II+D+ RS+G+G+VTFS + A+ MNGK L
Sbjct: 24 LAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXAMRSAIEGMNGKEL 83
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 84 DGRNITVN 91
>gi|20257679|gb|AAM16005.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L +AFS +G+V E+ II+D+ RS+G+G+VTFS + A+ MNGK L
Sbjct: 24 LAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXAMRSAIEGMNGKEL 83
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 84 DGRNITVN 91
>gi|148684930|gb|EDL16877.1| mCG114434 [Mus musculus]
Length = 153
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 46/70 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F+T ++ L D FS FG ++E ++ D+ RS+G+ ++TF+ E A A+ MNG+ L
Sbjct: 13 LNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSQGFDFITFTNPEHASDAMRAMNGESL 72
Query: 61 DGRVIFVDNV 70
DGR I VD+
Sbjct: 73 DGRQIRVDHA 82
>gi|393217699|gb|EJD03188.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 142
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++TT + L AFS +GQV ++ ++ D+ RS+G+G+VTFS+E EA A++ +N +
Sbjct: 10 LSWNTTDDTLRKAFSDYGQVVDSIVMRDRDTGRSRGFGFVTFSSETEATGAISALNEQEF 69
Query: 61 DGRVIFVD--NVRP 72
+GR I V+ N RP
Sbjct: 70 EGRRIKVNFANARP 83
>gi|299751777|ref|XP_001830476.2| glycine-rich RNA binding protein [Coprinopsis cinerea
okayama7#130]
gi|298409530|gb|EAU91356.2| glycine-rich RNA binding protein [Coprinopsis cinerea
okayama7#130]
Length = 142
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 48/68 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++TT + L AFSQ+G V ++ ++ D+ RS+G+G+VT+S EEA A+A ++ + L
Sbjct: 10 LSWNTTDDSLRQAFSQYGNVLDSIVMRDRDTGRSRGFGFVTYSATEEADAAIASLHDQEL 69
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 70 DGRRIKVN 77
>gi|215820610|ref|NP_001135964.1| RNA binding motif protein 39 [Nasonia vitripennis]
Length = 516
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 43/68 (63%)
Query: 3 FSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDG 62
F+ T+EML F FG++ +IMD RSKGYG++TF ++A+KAL +NG L G
Sbjct: 264 FNITEEMLKGIFEPFGKIENIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFELAG 323
Query: 63 RVIFVDNV 70
R + V NV
Sbjct: 324 RPMKVGNV 331
>gi|357473263|ref|XP_003606916.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507971|gb|AES89113.1| Glycine-rich RNA binding protein [Medicago truncatula]
Length = 190
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 51/72 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T + L AFS+FG++T++ +I D+ RS+G+G+VTF+ E+ + A+ +MNG+ +
Sbjct: 15 LAWATDSQALEQAFSKFGEITDSKVINDRETGRSRGFGFVTFAEEKSMRDAIEEMNGQDI 74
Query: 61 DGRVIFVDNVRP 72
DGR I V+ +
Sbjct: 75 DGRNITVNEAQS 86
>gi|78185978|ref|YP_374021.1| RNA recognition motif-containing protein [Chlorobium luteolum DSM
273]
gi|78165880|gb|ABB22978.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
luteolum DSM 273]
Length = 99
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 44/66 (66%)
Query: 3 FSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDG 62
+S +++ L DAFSQFGQV A IIMDK RSKG+G+V S++E + A+ MN + G
Sbjct: 19 YSVSEDDLRDAFSQFGQVDSANIIMDKFSGRSKGFGFVDMSSDEAGRAAIEAMNEQEFKG 78
Query: 63 RVIFVD 68
R I V+
Sbjct: 79 RTIKVN 84
>gi|388567211|ref|ZP_10153648.1| putative RNA-binding protein rbpB [Hydrogenophaga sp. PBC]
gi|388265594|gb|EIK91147.1| putative RNA-binding protein rbpB [Hydrogenophaga sp. PBC]
Length = 97
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 3 FSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDG 62
+S + L FS+FG V A ++ D+ RSKG+G+V ++E EAQ A+ +NG+ +DG
Sbjct: 12 YSVNDDSLRHNFSEFGNVASAKVMTDRDSGRSKGFGFVEMASEAEAQAAINGLNGQSVDG 71
Query: 63 RVIFVDNVRP 72
R I V+ RP
Sbjct: 72 RQIVVNVSRP 81
>gi|405963791|gb|EKC29337.1| RNA-binding protein 39 [Crassostrea gigas]
Length = 557
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T+EML F FG++ + +I D NRS+GYG++TF E+A+KAL +NG L
Sbjct: 267 LHFNITEEMLRGIFEPFGKIDDIKLIRDHETNRSQGYGFITFHDSEDAKKALEQLNGFEL 326
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 327 AGRPMKVGHV 336
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 28/56 (50%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVI 65
L + FS G+V + +IMD RSKG YV F + A+ N KLL +I
Sbjct: 179 LEEFFSSVGKVRDVRLIMDNKTRRSKGISYVEFQDTDSVPLAIGLTNQKLLGVPII 234
>gi|255535545|ref|YP_003095916.1| RNA-binding protein [Flavobacteriaceae bacterium 3519-10]
gi|255341741|gb|ACU07854.1| RNA-binding protein [Flavobacteriaceae bacterium 3519-10]
Length = 122
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ST +E L D FS+FG+V+ A II D+ RS+G+G+V S +E+ + A+ +NGK L
Sbjct: 9 INYSTREESLQDLFSEFGEVSSAKIITDRETGRSRGFGFVEMS-DEDGKNAIEALNGKEL 67
Query: 61 DGRVIFVDNVRP 72
DG+ + V +P
Sbjct: 68 DGKELNVSEAKP 79
>gi|406676693|ref|ZP_11083878.1| hypothetical protein HMPREF1170_02086 [Aeromonas veronii AMC35]
gi|423201900|ref|ZP_17188479.1| hypothetical protein HMPREF1167_02062 [Aeromonas veronii AER39]
gi|423207067|ref|ZP_17193623.1| hypothetical protein HMPREF1168_03258 [Aeromonas veronii AMC34]
gi|423209269|ref|ZP_17195823.1| hypothetical protein HMPREF1169_01341 [Aeromonas veronii AER397]
gi|404615847|gb|EKB12806.1| hypothetical protein HMPREF1167_02062 [Aeromonas veronii AER39]
gi|404617127|gb|EKB14063.1| hypothetical protein HMPREF1169_01341 [Aeromonas veronii AER397]
gi|404621360|gb|EKB18249.1| hypothetical protein HMPREF1168_03258 [Aeromonas veronii AMC34]
gi|404625007|gb|EKB21824.1| hypothetical protein HMPREF1170_02086 [Aeromonas veronii AMC35]
Length = 93
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T + L FSQFGQV + II+D+ +SKG+G++ +A+KA+A ++G +
Sbjct: 8 LSYRMTADELKTLFSQFGQVDKVDIIIDRDTGQSKGFGFIEMPVNGDAEKAIAGLHGTEV 67
Query: 61 DGRVIFVDNVRPSRRYNTDAPLAR 84
GR I V+ +P TDAP R
Sbjct: 68 GGRTITVNQAKP----KTDAPRGR 87
>gi|297598418|ref|NP_001045556.2| Os01g0974600 [Oryza sativa Japonica Group]
gi|215768629|dbj|BAH00858.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222619969|gb|EEE56101.1| hypothetical protein OsJ_04953 [Oryza sativa Japonica Group]
gi|255674125|dbj|BAF07470.2| Os01g0974600 [Oryza sativa Japonica Group]
Length = 116
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 43/68 (63%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T + L DAFSQ G + + +I +SKGYG+V F++E+EA AL M G+++
Sbjct: 44 LSYDTNETALKDAFSQHGHIIQVKVICHPVTGKSKGYGFVKFASEDEAAAALHKMGGEVI 103
Query: 61 DGRVIFVD 68
DGR I V
Sbjct: 104 DGRNIRVH 111
>gi|121583453|ref|YP_973884.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans
CJ2]
gi|120596707|gb|ABM40142.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans
CJ2]
Length = 150
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ ++ E L +F QFG VT A ++M++ RSKG+G+V + + +AQ A+ MNG+ L
Sbjct: 10 LPYTVRDEDLQQSFGQFGAVTSAKVMMERDTGRSKGFGFVEMANDAQAQAAINGMNGQPL 69
Query: 61 DGRVIFVDNVRP 72
GR I V+ RP
Sbjct: 70 GGRSITVNEARP 81
>gi|169861389|ref|XP_001837329.1| single-stranded DNA binding protein [Coprinopsis cinerea
okayama7#130]
gi|116502051|gb|EAU84946.1| single-stranded DNA binding protein [Coprinopsis cinerea
okayama7#130]
Length = 569
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 53/85 (62%), Gaps = 6/85 (7%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++ + LA F+ G++ AT+ MD+ +S+G+GYV F+T E AQKAL ++NGK +
Sbjct: 334 LSWNVDNDWLASEFASCGEIESATVQMDRNTGKSRGFGYVHFTTVEAAQKAL-ELNGKEI 392
Query: 61 DGRVIFVDNVRPSRRYNTDAPLARQ 85
D R I VD P N DA ARQ
Sbjct: 393 DNRPIKVDISTP---RNPDA--ARQ 412
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF+T+++ + F+ +G V + D+ R KG+GYV F E A+KA NG L
Sbjct: 434 LSFNTSEDSVWSLFNDYG-VKSVRLPTDRESGRPKGFGYVEFEDVEGAKKAFEANNGADL 492
Query: 61 DGRVIFVDNVRP 72
DGR I +D +P
Sbjct: 493 DGRPIRLDYSQP 504
>gi|432102707|gb|ELK30188.1| Polyadenylate-binding protein 1 [Myotis davidii]
Length = 650
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
ST E L F+ FG VT A +I+ G R KG+G+V+FS+ EEA+KA+ +M+GK+L R
Sbjct: 312 STDDEHLRKIFAPFGTVTSAKVIVKGG--RRKGFGFVSFSSREEAKKAVEEMHGKMLSAR 369
Query: 64 VIFVDNVR 71
++V R
Sbjct: 370 PLYVSYAR 377
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
TT E L + FSQ+G ++ I+ D +SKG+G++ F +A++A+ ++NGK GR
Sbjct: 210 TTDEYLLEIFSQYGPLSSVKIMTDDS-GKSKGFGFIRFECHADAKRAIEEVNGKQFGGRK 268
Query: 65 IFV 67
I+V
Sbjct: 269 IYV 271
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFVDN 69
L D F+ FG + ++ D+ N KG+G+V F T E A KA+ +MNG L+ R +FV
Sbjct: 123 LYDLFAGFGTILSCKVVSDE--NGPKGHGFVHFETREAADKAIKEMNGSLVKERKVFVGQ 180
Query: 70 V-RPSRR 75
RP++R
Sbjct: 181 FKRPNQR 187
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
T+ ML + FS G + + D +RS GYGYV F E+A AL MN +L G+
Sbjct: 30 VTEAMLYEKFSAAGPILSVRVCRDALSSRSLGYGYVNFHRPEDAGHALNTMNFDVLHGKP 89
Query: 65 IFV 67
+ +
Sbjct: 90 VRI 92
>gi|2267593|gb|AAB63589.1| glycine-rich RNA-binding protein [Oryza sativa Indica Group]
Length = 165
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 49/74 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L AFS +G++ E+ II D+ RS+G+G+VTFS+E+ + A+ M+GK L
Sbjct: 15 LAWATDNRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEGMSGKEL 74
Query: 61 DGRVIFVDNVRPSR 74
DGR I V+ + R
Sbjct: 75 DGRNITVNEAQSRR 88
>gi|125541605|gb|EAY88000.1| hypothetical protein OsI_09422 [Oryza sativa Indica Group]
Length = 318
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 45/68 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++ T EML + F + G V A ++ D RS+GYG+V +ST+EE +AL+ +NG L
Sbjct: 245 LSWTVTSEMLTEMFQKCGNVVGARVLYDGETGRSRGYGFVCYSTKEEMDEALSSLNGTEL 304
Query: 61 DGRVIFVD 68
+GR I V+
Sbjct: 305 EGREIRVN 312
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 25 IIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVI---FVDNVRP 72
++ D+ RS+G+ +VT ST E+ ++ + +++G L GR + F D +P
Sbjct: 178 VLYDRATGRSRGFAFVTMSTIEDCEQVIKNLDGSLYSGRTMRVNFADKPKP 228
>gi|34851124|gb|AAL13082.1| putative glycine-rich RNA-binding protein [Prunus avium]
Length = 178
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 47/68 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T + L AFS FG++ E+ II D+ RS+G+G+VTFS E+ + A+ MNG+ L
Sbjct: 15 LAWATDNDALERAFSPFGEIIESKIINDRETGRSRGFGFVTFSNEKAMRDAIEGMNGQNL 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRNITVN 82
>gi|218189840|gb|EEC72267.1| hypothetical protein OsI_05421 [Oryza sativa Indica Group]
Length = 116
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 43/68 (63%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T + L DAFSQ G + + +I +SKGYG+V F++E+EA AL M G+++
Sbjct: 44 LSYDTNETALKDAFSQHGHIIQVKVICHPVTGKSKGYGFVKFASEDEAAAALHKMGGEVI 103
Query: 61 DGRVIFVD 68
DGR I V
Sbjct: 104 DGRNIRVH 111
>gi|121583148|ref|YP_973589.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans
CJ2]
gi|120596410|gb|ABM39847.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans
CJ2]
Length = 148
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ ++ E L +F QFG VT A ++M++ RSKG+G+V + + +AQ A+ MNG+ L
Sbjct: 10 LPYTVRDEDLQQSFGQFGTVTSAKVMMERDTGRSKGFGFVEMANDAQAQAAINGMNGQPL 69
Query: 61 DGRVIFVDNVRP 72
GR I V+ RP
Sbjct: 70 GGRSITVNEARP 81
>gi|302762761|ref|XP_002964802.1| hypothetical protein SELMODRAFT_69504 [Selaginella
moellendorffii]
gi|300167035|gb|EFJ33640.1| hypothetical protein SELMODRAFT_69504 [Selaginella
moellendorffii]
Length = 94
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ L AF+ +G+VTEA +IMD+ RS+G+G+VTF + EA+ A+ M+G L
Sbjct: 2 LAWGVDDGTLRTAFANYGEVTEARVIMDRETGRSRGFGFVTFENDNEAKAAVQGMDGHEL 61
Query: 61 DGRVIFVDNVRPSRRYNTDAPLA 83
GR I VD Y +D P A
Sbjct: 62 GGRSIRVD-------YASDRPSA 77
>gi|351722320|ref|NP_001236472.1| uncharacterized protein LOC100306540 [Glycine max]
gi|255628821|gb|ACU14755.1| unknown [Glycine max]
Length = 146
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T + +L DAF Q G++ E +I D +S+GYG+V F +E A A +MNG++L
Sbjct: 65 LSYDTNEPILRDAFGQHGEIIEVKVICDHVTGKSRGYGFVRFVSETTAAAARKEMNGQIL 124
Query: 61 DGRVIFVDNVRPSRR 75
DGR I V R
Sbjct: 125 DGRRIRVSYAHKGER 139
>gi|119492333|ref|XP_001263582.1| glycine-rich RNA-binding protein, putative [Neosartorya fischeri
NRRL 181]
gi|119411742|gb|EAW21685.1| glycine-rich RNA-binding protein, putative [Neosartorya fischeri
NRRL 181]
Length = 118
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ TT + L F +G V EA ++ D+ NRS+G+G+V FS++ EA A+ MN +
Sbjct: 9 LAWHTTDDALRQGFEPYGVVEEAIVVKDRDTNRSRGFGFVRFSSDTEADAAMDAMNNQEF 68
Query: 61 DGRVIFVDNV--RPSR 74
DGR I VD RP+R
Sbjct: 69 DGRTIRVDKASERPAR 84
>gi|327279534|ref|XP_003224511.1| PREDICTED: putative RNA-binding protein 3-like isoform 2 [Anolis
carolinensis]
Length = 231
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F T ++ L FS FG ++E +I DK RS+G+G++TF+ E A A+ MNG+ +
Sbjct: 92 LNFDTDEQGLEQHFSSFGPISEVVVIKDKETQRSRGFGFITFANPEHASDAMRAMNGESV 151
Query: 61 DGRVIFVDNVRPS 73
DGR I VD+ S
Sbjct: 152 DGRQIRVDHAGKS 164
>gi|425781538|gb|EKV19498.1| Ribosome biogenesis (Nop4), putative [Penicillium digitatum PHI26]
gi|425782769|gb|EKV20659.1| Ribosome biogenesis (Nop4), putative [Penicillium digitatum Pd1]
Length = 722
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S T E LA+ FSQ + A ++ DK SKG+G+VTF+ E+A+ AL + NG DG+
Sbjct: 46 SATTESLAEHFSQSYIIKHAVVVSDKETKVSKGFGFVTFADVEDAESALKEFNGSKFDGK 105
Query: 64 VIFVDNVRPSRRYNTDAPLARQLP 87
+I VD SR+ D + R +P
Sbjct: 106 IIRVDYAE-SRKREIDEKIGRSVP 128
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 14 FSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFVD 68
F FG+V T+ GK G+G+VT + A+KAL +NGK +DGR I VD
Sbjct: 170 FRSFGKVKFVTLPKRNGK--LSGFGFVTMRGRKNAEKALQMINGKEIDGRQIAVD 222
>gi|411009683|ref|ZP_11386012.1| RNA-binding protein [Aeromonas aquariorum AAK1]
Length = 81
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 6 TKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVI 65
T + L FSQFGQV + II+D+ +SKG+G++ EA+KA+A ++G + GR I
Sbjct: 2 TADELKTVFSQFGQVDKVDIIIDRDTGQSKGFGFIEMPVNGEAEKAIAGLHGTEIGGRTI 61
Query: 66 FVDNVRPSRRYNTDAPLAR 84
V+ +P TDAP R
Sbjct: 62 TVNQAKP----KTDAPRGR 76
>gi|337281471|ref|YP_004620943.1| glycine-rich RNA binding protein [Ramlibacter tataouinensis
TTB310]
gi|334732548|gb|AEG94924.1| Candidate glycine-rich RNA binding protein [Ramlibacter
tataouinensis TTB310]
Length = 128
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 42/63 (66%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFVDN 69
+ AFSQFG V+ A ++M++ RSKG+G+V S+ EAQ A+ MNG+ + GR + V+
Sbjct: 19 MEQAFSQFGTVSSAKVMMERDTGRSKGFGFVEMSSPAEAQAAIEGMNGQQIGGRGLVVNE 78
Query: 70 VRP 72
RP
Sbjct: 79 ARP 81
>gi|406929710|gb|EKD65230.1| RNA-binding protein [uncultured bacterium]
Length = 95
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 44/72 (61%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ TT E L FSQ G+V A I+D+ + KG+G+V +T EEAQKA+ +N L
Sbjct: 10 LSYGTTDEQLEQHFSQAGKVISAKAIVDRYSGQGKGFGFVEMATAEEAQKAIQQLNNSNL 69
Query: 61 DGRVIFVDNVRP 72
+ R I V+ RP
Sbjct: 70 NDRSIVVNEARP 81
>gi|224097630|ref|XP_002311019.1| predicted protein [Populus trichocarpa]
gi|222850839|gb|EEE88386.1| predicted protein [Populus trichocarpa]
Length = 333
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/59 (50%), Positives = 41/59 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKL 59
+SF T+++ L AF FG++ E IIMDK RSKGY +V ++TEE A AL +MNGK+
Sbjct: 273 LSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFVEYTTEEAASAALKEMNGKV 331
>gi|90704785|dbj|BAE92287.1| putative glycine-rich RNA binding protein [Cryptomeria japonica]
Length = 181
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 46/68 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ST L DAF+ FG+V ++ ++ D+ RS+G+G+VTF E+ + A+ MNG+ L
Sbjct: 15 LSWSTDDRSLKDAFTAFGEVMDSKVVSDRETGRSRGFGFVTFMDEQSMRDAIEGMNGRDL 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRNITVN 82
>gi|224131664|ref|XP_002321147.1| predicted protein [Populus trichocarpa]
gi|222861920|gb|EEE99462.1| predicted protein [Populus trichocarpa]
Length = 120
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+S ++ L DAFS FG VTE I+ D+ RS+G+G+V+F E+EA A M+GK L
Sbjct: 25 LSWSVDEKSLKDAFSSFGDVTEVNILYDRNSGRSRGFGFVSFCKEDEAVSAKDAMDGKAL 84
Query: 61 DGR 63
GR
Sbjct: 85 LGR 87
>gi|24582417|ref|NP_723245.1| CG11266, isoform C [Drosophila melanogaster]
gi|24582419|ref|NP_723246.1| CG11266, isoform D [Drosophila melanogaster]
gi|24582421|ref|NP_723247.1| CG11266, isoform F [Drosophila melanogaster]
gi|24582423|ref|NP_723248.1| CG11266, isoform G [Drosophila melanogaster]
gi|45550943|ref|NP_723244.2| CG11266, isoform E [Drosophila melanogaster]
gi|22945836|gb|AAN10616.1| CG11266, isoform C [Drosophila melanogaster]
gi|22945837|gb|AAN10617.1| CG11266, isoform D [Drosophila melanogaster]
gi|22945838|gb|AAN10618.1| CG11266, isoform F [Drosophila melanogaster]
gi|22945839|gb|AAN10619.1| CG11266, isoform G [Drosophila melanogaster]
gi|45445036|gb|AAN10615.2| CG11266, isoform E [Drosophila melanogaster]
Length = 287
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ +IMD RSKGYG++T+ ++A+KAL +NG L
Sbjct: 35 LHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNGFEL 94
Query: 61 DGRVIFVDNVRPSRRYNT 78
GR++ V NV NT
Sbjct: 95 AGRLMKVGNVTERLDMNT 112
>gi|349804063|gb|AEQ17504.1| putative cold-inducible rna-binding protein b [Hymenochirus
curtipes]
Length = 123
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 46/68 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F T ++ L F ++GQ++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 11 LNFDTNEDGLEQVFGKYGQISEVVVVKDRETKRSRGFGFVTFENPDDAKDAMMAMNGKAV 70
Query: 61 DGRVIFVD 68
DGR I VD
Sbjct: 71 DGRQIRVD 78
>gi|193212689|ref|YP_001998642.1| RNP-1 like RNA-binding protein [Chlorobaculum parvum NCIB 8327]
gi|193086166|gb|ACF11442.1| RNP-1 like RNA-binding protein [Chlorobaculum parvum NCIB 8327]
Length = 88
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ + T+ L DAFS+FG V +A++IMDK RSKG+G+V + +EEA +A++ +N L
Sbjct: 8 LDYEITETDLRDAFSEFGDVAKASVIMDKFSGRSKGFGFVEMTNDEEANEAISSLNESKL 67
Query: 61 DGRVIFVDNVRP 72
R I V+ +P
Sbjct: 68 GSRNIKVNEAKP 79
>gi|365088445|ref|ZP_09327889.1| RNP-1 like RNA-binding protein [Acidovorax sp. NO-1]
gi|363417101|gb|EHL24188.1| RNP-1 like RNA-binding protein [Acidovorax sp. NO-1]
Length = 111
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 3 FSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDG 62
+S T L FS+FG V+ A ++MD+ RSKG+G+V + E AQ A++ ++G +DG
Sbjct: 12 YSVTDASLQSNFSEFGGVSSAKVMMDRETGRSKGFGFVEMANAEVAQAAISGLHGMSVDG 71
Query: 63 RVIFVDNVRPSRRYNTDA 80
R I V+ RP R +DA
Sbjct: 72 RTIVVNLARP-REERSDA 88
>gi|212274941|ref|NP_001130982.1| hypothetical protein [Zea mays]
gi|194690622|gb|ACF79395.1| unknown [Zea mays]
gi|413951564|gb|AFW84213.1| hypothetical protein ZEAMMB73_909652 [Zea mays]
Length = 142
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+S + L DAFS FG VTE I+ DK RS+G+G+V FS + EA+ A M+GK++
Sbjct: 55 LSWSVDERSLTDAFSSFGTVTEVRIMYDKNSGRSRGFGFVHFSNDNEAKCAKDAMDGKVM 114
Query: 61 DGR 63
GR
Sbjct: 115 LGR 117
>gi|189345649|ref|YP_001942178.1| RNP-1 like RNA-binding protein [Chlorobium limicola DSM 245]
gi|189339796|gb|ACD89199.1| RNP-1 like RNA-binding protein [Chlorobium limicola DSM 245]
Length = 90
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 43/66 (65%)
Query: 3 FSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDG 62
+S T++ L D FSQFGQV A II DK RSKG+G+V + EA++A+ MN K L G
Sbjct: 10 YSVTEDDLRDVFSQFGQVDSANIITDKFSGRSKGFGFVDMPIDGEAREAIESMNDKDLKG 69
Query: 63 RVIFVD 68
R I V+
Sbjct: 70 RTIKVN 75
>gi|351725105|ref|NP_001235801.1| uncharacterized protein LOC100305467 [Glycine max]
gi|255625591|gb|ACU13140.1| unknown [Glycine max]
Length = 156
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 47/68 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L AFSQ+G V E+ II D+ RS+G+G+VTF++E+ + A+ MNG+ L
Sbjct: 15 LAWATDNYDLEKAFSQYGDVVESKIINDRETGRSRGFGFVTFASEDSMRDAIEGMNGQNL 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRNITVN 82
>gi|313229163|emb|CBY23748.1| unnamed protein product [Oikopleura dioica]
Length = 570
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S E L +AF QFG +T A +I D RSKG+G+V FS+ EEA KA+ +MNG++ G+
Sbjct: 296 SIDDEGLREAFKQFGNITSAKVITDLN-GRSKGFGFVCFSSPEEATKAVTEMNGRIFGGK 354
Query: 64 VIFV 67
++V
Sbjct: 355 PLYV 358
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S + L D FS FG + ++ D N SKG+G+V + ++E AQ+A+ +NG L++ +
Sbjct: 100 SIDNKALYDTFSSFGNILSCKVVCDI--NGSKGFGFVHYESDESAQRAIEKVNGMLMEDK 157
Query: 64 VIFV 67
+FV
Sbjct: 158 KVFV 161
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 36/64 (56%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S + L F QFG+V +I D+ SK +G+++F ++A+ A+ M+ K ++G+
Sbjct: 192 SWDTDALLKNFEQFGEVVSHKVICDETTGLSKCHGFISFKEHDQAEAAVEIMHEKEIEGK 251
Query: 64 VIFV 67
++
Sbjct: 252 KLYC 255
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%)
Query: 6 TKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVI 65
T+ ML D F G V + D RS GY YV F +A++AL MN ++ G+ I
Sbjct: 14 TEAMLYDKFQASGPVLSIRVCRDMVTRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPI 73
Query: 66 FV 67
+
Sbjct: 74 RI 75
>gi|219130188|ref|XP_002185253.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403432|gb|EEC43385.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 605
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 43/64 (67%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S T +ML D F+ G +T A ++ D RS+G+G+V +ST EE+ +A+ +MNGKL+ +
Sbjct: 337 SVTDDMLRDEFAVMGTITSARVMKDAKDGRSRGFGFVCYSTPEESTRAVNEMNGKLIANK 396
Query: 64 VIFV 67
IFV
Sbjct: 397 PIFV 400
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFVDN 69
L D FS FG + ++ D+ S GYGYV + T E A A+ ++G L+DG+ + V +
Sbjct: 143 LYDTFSLFGNILSCKVVTDREGGVSMGYGYVHYETAEAANAAIEKLDGMLIDGQEVQVGH 202
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGK-- 58
V + L F+QFG+V AT+ + N++ G+G++ F+ E A A+ +NGK
Sbjct: 223 VPYEWDDARLNQEFAQFGEVLSATVSRED-TNQTLGFGFINFAEHESAVAAVEALNGKEY 281
Query: 59 --LLDGRVI 65
LDG I
Sbjct: 282 TTTLDGEEI 290
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
+ +L + FS G V + D RS GY YV F +A++A+ MN ++ G+
Sbjct: 50 VNESLLFEIFSAVGPVASIRVCRDAVTRRSLGYSYVNFHQMADAERAMDTMNFSMIKGK 108
>gi|115449577|ref|NP_001048500.1| Os02g0815200 [Oryza sativa Japonica Group]
gi|47847880|dbj|BAD21673.1| putative RNA-binding protein RNP1 precursor [Oryza sativa Japonica
Group]
gi|47848169|dbj|BAD21996.1| putative RNA-binding protein RNP1 precursor [Oryza sativa Japonica
Group]
gi|113538031|dbj|BAF10414.1| Os02g0815200 [Oryza sativa Japonica Group]
gi|125584133|gb|EAZ25064.1| hypothetical protein OsJ_08857 [Oryza sativa Japonica Group]
gi|215695143|dbj|BAG90334.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737594|dbj|BAG96724.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 316
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 45/68 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++ T EML + F + G V A ++ D RS+GYG+V +ST+EE +AL+ +NG L
Sbjct: 243 LSWTVTSEMLTEMFQKCGNVVGARVLYDGETGRSRGYGFVCYSTKEEMDEALSSLNGTEL 302
Query: 61 DGRVIFVD 68
+GR I V+
Sbjct: 303 EGREIRVN 310
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 25 IIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVI---FVDNVRP 72
++ D+ RS+G+ +VT ST E+ ++ + +++G L GR + F D +P
Sbjct: 176 VLYDRATGRSRGFAFVTMSTIEDCEQVIKNLDGSLYSGRTMRVNFADKPKP 226
>gi|313219101|emb|CBY43303.1| unnamed protein product [Oikopleura dioica]
Length = 512
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S E L +AF QFG +T A +I D RSKG+G+V FS+ EEA KA+ +MNG++ G+
Sbjct: 296 SIDDEGLREAFKQFGNITSAKVITDLN-GRSKGFGFVCFSSPEEATKAVTEMNGRIFGGK 354
Query: 64 VIFV 67
++V
Sbjct: 355 PLYV 358
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S + L D FS FG + ++ D N SKG+G+V + ++E AQ+A+ +NG L++ +
Sbjct: 100 SIDNKALYDTFSSFGNILSCKVVCDI--NGSKGFGFVHYESDESAQRAIEKVNGMLMEDK 157
Query: 64 VIFV 67
+FV
Sbjct: 158 KVFV 161
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 37/64 (57%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S + L + F QFG+V +I D+ SK +G+++F ++A+ A+ M+ K ++G+
Sbjct: 192 SWDTDALLENFEQFGEVVSHKVICDETTGLSKCHGFISFKEHDQAEAAVEIMHEKEIEGK 251
Query: 64 VIFV 67
++
Sbjct: 252 KLYC 255
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%)
Query: 6 TKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVI 65
T+ ML D F G V + D RS GY YV F +A++AL MN ++ G+ I
Sbjct: 14 TEAMLYDKFQASGPVLSIRVCRDMVTRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPI 73
Query: 66 FV 67
+
Sbjct: 74 RI 75
>gi|356576101|ref|XP_003556172.1| PREDICTED: polyadenylate-binding protein 5-like isoform 1 [Glycine
max]
Length = 652
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S + E L D FS+FG +T +++D RSKG G+V+FST EEA KAL +MNGKL+ +
Sbjct: 328 SFSDEKLKDLFSEFGTITSCKVMIDS-NGRSKGSGFVSFSTPEEASKALNEMNGKLIGRK 386
Query: 64 VIFV 67
++V
Sbjct: 387 PLYV 390
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S + L D F+ FG V + +D +SKGYG+V F EE AQ A+ +NG L++ +
Sbjct: 133 SIDNKALHDTFAAFGTVLSCKVALDS-SGQSKGYGFVQFDNEEAAQNAIKRLNGMLINDK 191
Query: 64 VIFV 67
++V
Sbjct: 192 QVYV 195
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
+ +E L D FSQ Q+ + D+ K S GY YV F+ ++A A+ +N L+G+
Sbjct: 45 NVNEEQLYDLFSQVAQIASIRVCRDQTKRSSLGYAYVNFANAQDASNAMELLNFTPLNGK 104
Query: 64 VIFV 67
I +
Sbjct: 105 PIRI 108
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMD-KGKNRSKGYGYVTFSTEEEAQKALADMNGKL 59
+S + T E L F +G +T AT++ D GK+R +G+V F + A A+ +NG
Sbjct: 221 LSETYTDEDLKKLFGPYGTITSATVMKDVNGKSRC--FGFVNFQNPDSAAAAVERLNGTT 278
Query: 60 LDG-RVIFVDNVRPSRRYNTDAPLARQLPQ 88
++ RV++V R R+ +A L ++ Q
Sbjct: 279 INNDRVLYVG--RAQRKAEREAELKAKIEQ 306
>gi|327279532|ref|XP_003224510.1| PREDICTED: putative RNA-binding protein 3-like isoform 1 [Anolis
carolinensis]
Length = 152
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F T ++ L FS FG ++E +I DK RS+G+G++TF+ E A A+ MNG+ +
Sbjct: 13 LNFDTDEQGLEQHFSSFGPISEVVVIKDKETQRSRGFGFITFANPEHASDAMRAMNGESV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD+ S
Sbjct: 73 DGRQIRVDHAGKS 85
>gi|149240785|ref|XP_001526223.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450346|gb|EDK44602.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 601
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S E L AF++FG + +A ++ D +RS+GYG+VTF +E+A+ AL MNG+ L
Sbjct: 200 LSSEVNDEALKKAFTKFGSLKQAHVMWDMQTSRSRGYGFVTFGKQEDAENALQSMNGEWL 259
Query: 61 DGRVI 65
GR I
Sbjct: 260 GGRAI 264
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S ++E + + FS ++ +++ Y ++ F+ E+A+KAL +NGK ++G
Sbjct: 110 SASEEQINEIFSSVSNPIKSIKLLNDKNKLGFNYAFIEFNESEDAEKALNSLNGKDVNGS 169
Query: 64 VIFVDNVRPSRRYNTDAPLARQLPQSPEEN 93
I V+ Y + A P+ P N
Sbjct: 170 DIKVN-----WAYQSAAIAGGSTPEEPSYN 194
>gi|356576103|ref|XP_003556173.1| PREDICTED: polyadenylate-binding protein 5-like isoform 2 [Glycine
max]
Length = 642
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S + E L D FS+FG +T +++D RSKG G+V+FST EEA KAL +MNGKL+ +
Sbjct: 328 SFSDEKLKDLFSEFGTITSCKVMIDS-NGRSKGSGFVSFSTPEEASKALNEMNGKLIGRK 386
Query: 64 VIFV 67
++V
Sbjct: 387 PLYV 390
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S + L D F+ FG V + +D +SKGYG+V F EE AQ A+ +NG L++ +
Sbjct: 133 SIDNKALHDTFAAFGTVLSCKVALDS-SGQSKGYGFVQFDNEEAAQNAIKRLNGMLINDK 191
Query: 64 VIFV 67
++V
Sbjct: 192 QVYV 195
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
+ +E L D FSQ Q+ + D+ K S GY YV F+ ++A A+ +N L+G+
Sbjct: 45 NVNEEQLYDLFSQVAQIASIRVCRDQTKRSSLGYAYVNFANAQDASNAMELLNFTPLNGK 104
Query: 64 VIFV 67
I +
Sbjct: 105 PIRI 108
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMD-KGKNRSKGYGYVTFSTEEEAQKALADMNGKL 59
+S + T E L F +G +T AT++ D GK+R +G+V F + A A+ +NG
Sbjct: 221 LSETYTDEDLKKLFGPYGTITSATVMKDVNGKSRC--FGFVNFQNPDSAAAAVERLNGTT 278
Query: 60 LDG-RVIFVDNVRPSRRYNTDAPLARQLPQ 88
++ RV++V R R+ +A L ++ Q
Sbjct: 279 INNDRVLYVG--RAQRKAEREAELKAKIEQ 306
>gi|46115998|ref|XP_384017.1| hypothetical protein FG03841.1 [Gibberella zeae PH-1]
Length = 1163
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ ++TT + L +AF +GQ+ ++ ++ D+ RS+G+G+VTF + +EA+ A+ +N + L
Sbjct: 10 LGWNTTDDSLRNAFQDYGQILDSIVMRDRDTGRSRGFGFVTFGSSQEAETAIISLNEQEL 69
Query: 61 DGRVIFVD--NVRP 72
DGR I V+ N RP
Sbjct: 70 DGRRIKVNLANARP 83
>gi|340379888|ref|XP_003388457.1| PREDICTED: RNA-binding protein 24-like [Amphimedon queenslandica]
Length = 214
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ + TT E L D F+QFG + EA +I D+ ++SKGYG+VT +E+A+KA A+ N ++
Sbjct: 23 LPYHTTNETLYDFFAQFGDIEEAVVIHDRVTSKSKGYGFVTMKHKEDAEKACANPN-PVI 81
Query: 61 DGR 63
DGR
Sbjct: 82 DGR 84
>gi|255713222|ref|XP_002552893.1| KLTH0D03916p [Lachancea thermotolerans]
gi|238934273|emb|CAR22455.1| KLTH0D03916p [Lachancea thermotolerans CBS 6340]
Length = 505
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 43/68 (63%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+S E L F G V A +IM++G +RS+GYGYV F + A+KA+ +M+GK +
Sbjct: 263 LSWSVDDEWLKTEFEPIGGVISARVIMERGTDRSRGYGYVDFENKFYAEKAVKEMHGKEI 322
Query: 61 DGRVIFVD 68
DGR I D
Sbjct: 323 DGRPINCD 330
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF+ ++ + + F++ G+V + N+ KG+GYV +S+ +EAQKA + G +
Sbjct: 364 LSFNADRDNIFETFAEHGEVVSVRLPTHPETNQPKGFGYVQYSSVDEAQKAFEALQGHYI 423
Query: 61 DGRVIFVDNVRPSRR 75
D R + +D P R
Sbjct: 424 DNRPVRLDFSTPKPR 438
>gi|148927167|ref|ZP_01810792.1| RNP-1 like RNA-binding protein [candidate division TM7 genomosp.
GTL1]
gi|147887382|gb|EDK72831.1| RNP-1 like RNA-binding protein [candidate division TM7 genomosp.
GTL1]
Length = 108
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 48/72 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++TT + L F++ G+V EA ++ D+ RSKG+G+VT+ +E+A A+ +++ L
Sbjct: 10 LAYATTDDSLRAHFAEKGEVEEAKVVTDRDSGRSKGFGFVTYVNDEDADTAIKELDNSEL 69
Query: 61 DGRVIFVDNVRP 72
DGR I V+ RP
Sbjct: 70 DGRNIHVNEARP 81
>gi|71000080|ref|XP_754757.1| glycine-rich RNA-binding protein [Aspergillus fumigatus Af293]
gi|66852394|gb|EAL92719.1| glycine-rich RNA-binding protein, putative [Aspergillus fumigatus
Af293]
gi|159127765|gb|EDP52880.1| glycine-rich RNA-binding protein, putative [Aspergillus fumigatus
A1163]
Length = 118
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ TT + L F +G V EA ++ D+ NRS+G+G+V FS++ EA A+ MN +
Sbjct: 9 LAWHTTDDALRQGFEPYGVVEEAIVVKDRDTNRSRGFGFVRFSSDTEADAAMDAMNNQEF 68
Query: 61 DGRVIFVDNV--RPSR 74
DGR I VD RP+R
Sbjct: 69 DGRTIRVDKASERPAR 84
>gi|246771225|gb|ACS94937.1| putative glycine-rich RNA-binding protein [Tamarix hispida]
Length = 143
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 44/67 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T + L DAFS FG+VT+A +I D+ RS+G+G+V F E A AL+ M+G L
Sbjct: 42 LSWGTDDQSLKDAFSSFGEVTDAKVITDRETGRSRGFGFVNFVDNEAAGSALSSMDGVEL 101
Query: 61 DGRVIFV 67
+GR I V
Sbjct: 102 NGRSIRV 108
>gi|440804413|gb|ELR25290.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 146
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 46/70 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ST L AF Q G+V +A +I+D+ +S+G+G+VTFS+ +EA+ A +N L
Sbjct: 10 LSWSTDDNSLRSAFEQHGEVIDAKVILDRDTGKSRGFGFVTFSSADEAEAAKGALNQTDL 69
Query: 61 DGRVIFVDNV 70
DGR I VD+
Sbjct: 70 DGREIRVDSA 79
>gi|42522915|ref|NP_968295.1| RNA-binding protein [Bdellovibrio bacteriovorus HD100]
gi|426403373|ref|YP_007022344.1| RNA-binding protein [Bdellovibrio bacteriovorus str. Tiberius]
gi|39574111|emb|CAE79288.1| putative RNA-binding protein [Bdellovibrio bacteriovorus HD100]
gi|425860041|gb|AFY01077.1| putative RNA-binding protein [Bdellovibrio bacteriovorus str.
Tiberius]
Length = 116
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+S + LAD F++FG V A I++D+ RSKG+ +V ST++EA A+A +NG L
Sbjct: 10 LSYSLDDQSLADTFAEFGNVESARIVIDRETGRSKGFAFVEMSTDDEAATAIAKLNGVEL 69
Query: 61 DGRVIFVDNVRP 72
GR + V +P
Sbjct: 70 MGRAMNVSEAKP 81
>gi|302756609|ref|XP_002961728.1| hypothetical protein SELMODRAFT_140819 [Selaginella
moellendorffii]
gi|300170387|gb|EFJ36988.1| hypothetical protein SELMODRAFT_140819 [Selaginella
moellendorffii]
Length = 130
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ L AF+ +G+VTEA +IMD+ RS+G+G+VTF + EA+ A+ M+G L
Sbjct: 17 LAWGVDDGTLRTAFANYGEVTEARVIMDRETGRSRGFGFVTFENDNEAKAAVQGMDGHEL 76
Query: 61 DGRVIFVDNVRPSRRYNTDAPLA 83
GR I VD Y +D P A
Sbjct: 77 GGRSIRVD-------YASDRPSA 92
>gi|194862772|ref|XP_001970115.1| GG10454 [Drosophila erecta]
gi|190661982|gb|EDV59174.1| GG10454 [Drosophila erecta]
Length = 593
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 45/70 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ +IMD RSKGYG++T+ ++A+KAL +NG L
Sbjct: 341 LHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNGFEL 400
Query: 61 DGRVIFVDNV 70
GR++ V NV
Sbjct: 401 AGRLMKVGNV 410
>gi|406907930|gb|EKD48603.1| RNA-binding protein [uncultured bacterium]
Length = 100
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ +S T++ L + F QFG V+ +++D+ RSKG+ +V S +EE + A+ +NG L
Sbjct: 8 LPYSITEDSLRELFEQFGDVSSTKVVVDQISGRSKGFAFVDMSNDEEGEAAIEKLNGHEL 67
Query: 61 DGRVIFVDNVRP 72
DGR I V+ +P
Sbjct: 68 DGRTIVVNKAKP 79
>gi|242055771|ref|XP_002457031.1| hypothetical protein SORBIDRAFT_03g047450 [Sorghum bicolor]
gi|241929006|gb|EES02151.1| hypothetical protein SORBIDRAFT_03g047450 [Sorghum bicolor]
Length = 146
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 43/67 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T + L DAFSQ+G V +I +SKG+G+V FS+E +A AL +NG++L
Sbjct: 66 LSYDTNETALKDAFSQYGDVIAVRVICHPTTGKSKGFGFVKFSSENQAAAALQKLNGQVL 125
Query: 61 DGRVIFV 67
DGR I V
Sbjct: 126 DGRNIRV 132
>gi|449507320|ref|XP_004162998.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 139
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 45/68 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L AFS +G++ EA I+ D+ RS+G+G+VTF EE + A+ MNG +L
Sbjct: 15 LAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHIL 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRNITVN 82
>gi|449462238|ref|XP_004148848.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
gi|449507318|ref|XP_004162997.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 141
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 45/68 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L AFS +G++ EA I+ D+ RS+G+G+VTF EE + A+ MNG +L
Sbjct: 15 LAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHIL 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRNITVN 82
>gi|449462236|ref|XP_004148847.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
gi|449507315|ref|XP_004162996.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 144
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 45/68 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L AFS +G++ EA I+ D+ RS+G+G+VTF EE + A+ MNG +L
Sbjct: 15 LAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHIL 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRNITVN 82
>gi|449462234|ref|XP_004148846.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 156
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 45/68 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L AFS +G++ EA I+ D+ RS+G+G+VTF EE + A+ MNG +L
Sbjct: 15 LAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHIL 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRNITVN 82
>gi|449462232|ref|XP_004148845.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
gi|449507311|ref|XP_004162995.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 171
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 45/68 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L AFS +G++ EA I+ D+ RS+G+G+VTF EE + A+ MNG +L
Sbjct: 15 LAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHIL 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRNITVN 82
>gi|296273514|ref|YP_003656145.1| RNP-1 like RNA-binding protein [Arcobacter nitrofigilis DSM 7299]
gi|296097688|gb|ADG93638.1| RNP-1 like RNA-binding protein [Arcobacter nitrofigilis DSM 7299]
Length = 92
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 47/72 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ TT+E L FSQ+G+V+ +I D+ R+KG+G+V + + A KA+ ++NGK
Sbjct: 8 MSYGTTEEGLTTLFSQYGEVSSVKLITDRDTGRAKGFGFVAMNDDSAALKAIEELNGKEY 67
Query: 61 DGRVIFVDNVRP 72
DGR + ++ +P
Sbjct: 68 DGRTLRINEAKP 79
>gi|255553947|ref|XP_002518014.1| RNA binding protein, putative [Ricinus communis]
gi|223542996|gb|EEF44532.1| RNA binding protein, putative [Ricinus communis]
Length = 267
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ T KE L + F QFG++ EA +I DK RSKGYG+VTF E A++A D + ++
Sbjct: 26 LAWETHKETLKNYFQQFGEILEAVVIFDKNTGRSKGYGFVTFKEAEAARRACVD-SSPVI 84
Query: 61 DGR 63
DGR
Sbjct: 85 DGR 87
>gi|356568734|ref|XP_003552565.1| PREDICTED: uncharacterized protein LOC100807155 [Glycine max]
Length = 244
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 48/68 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ST L ++F+++G+V + +IMD+ RS+G+G+VTF+T E+A A+ M+G+ L
Sbjct: 47 ISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFVTFATSEDASSAIQGMDGQDL 106
Query: 61 DGRVIFVD 68
GR I V+
Sbjct: 107 HGRRIRVN 114
>gi|255645506|gb|ACU23248.1| unknown [Glycine max]
Length = 243
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 48/68 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ST L ++F+++G+V + +IMD+ RS+G+G+VTF+T E+A A+ M+G+ L
Sbjct: 47 ISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFVTFATSEDASSAIQGMDGQDL 106
Query: 61 DGRVIFVD 68
GR I V+
Sbjct: 107 HGRRIRVN 114
>gi|195471585|ref|XP_002088083.1| GE14328 [Drosophila yakuba]
gi|194174184|gb|EDW87795.1| GE14328 [Drosophila yakuba]
Length = 590
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 45/70 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ +IMD RSKGYG++T+ ++A+KAL +NG L
Sbjct: 338 LHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNGFEL 397
Query: 61 DGRVIFVDNV 70
GR++ V NV
Sbjct: 398 AGRLMKVGNV 407
>gi|110597824|ref|ZP_01386107.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
ferrooxidans DSM 13031]
gi|110340549|gb|EAT59032.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
ferrooxidans DSM 13031]
Length = 90
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 47/72 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ +S T+ L + F +FG+V+ A++I DK RSKG+G+V + + EA A+AD+N L
Sbjct: 8 LDYSVTEADLRETFGEFGEVSSASVINDKFTGRSKGFGFVEMANDAEAASAIADLNDSDL 67
Query: 61 DGRVIFVDNVRP 72
+GR I V+ +P
Sbjct: 68 NGRTIKVNEAKP 79
>gi|195338839|ref|XP_002036031.1| GM16278 [Drosophila sechellia]
gi|194129911|gb|EDW51954.1| GM16278 [Drosophila sechellia]
Length = 596
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 45/70 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ +IMD RSKGYG++T+ ++A+KAL +NG L
Sbjct: 344 LHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNGFEL 403
Query: 61 DGRVIFVDNV 70
GR++ V NV
Sbjct: 404 AGRLMKVGNV 413
>gi|19920866|ref|NP_609095.1| CG11266, isoform B [Drosophila melanogaster]
gi|24582412|ref|NP_723243.1| CG11266, isoform A [Drosophila melanogaster]
gi|7297213|gb|AAF52478.1| CG11266, isoform A [Drosophila melanogaster]
gi|15292031|gb|AAK93284.1| LD35730p [Drosophila melanogaster]
gi|22945834|gb|AAN10614.1| CG11266, isoform B [Drosophila melanogaster]
gi|220946034|gb|ACL85560.1| CG11266-PA [synthetic construct]
gi|220955788|gb|ACL90437.1| CG11266-PA [synthetic construct]
Length = 594
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 45/70 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ +IMD RSKGYG++T+ ++A+KAL +NG L
Sbjct: 342 LHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNGFEL 401
Query: 61 DGRVIFVDNV 70
GR++ V NV
Sbjct: 402 AGRLMKVGNV 411
>gi|326487468|dbj|BAJ89718.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510625|dbj|BAJ87529.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518508|dbj|BAJ88283.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520529|dbj|BAK07523.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326527353|dbj|BAK04618.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 161
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 50/68 (73%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T + L +AFS++G V ++ II D+ RS+G+G+VTF+++E ++A+ MNG+ L
Sbjct: 13 LAWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 72
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 73 DGRNITVN 80
>gi|114145394|dbj|BAF30986.1| glycine-rich RNA-binding protein [Triticum aestivum]
Length = 163
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 50/68 (73%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T + L +AFS++G V ++ II D+ RS+G+G+VTF+++E ++A+ MNG+ L
Sbjct: 13 LAWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDL 72
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 73 DGRNITVN 80
>gi|403290994|ref|XP_003936587.1| PREDICTED: putative RNA-binding protein 3-like [Saimiri
boliviensis boliviensis]
Length = 159
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F+ ++ L D FS FG ++E ++ D+ RS+G+G++TF+ E A A+ MNG+ L
Sbjct: 13 LNFNNDEQPLEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMKAMNGESL 72
Query: 61 DGRVIFVDNVRPSRR 75
DG I VD+ S R
Sbjct: 73 DGGQIHVDHAGKSAR 87
>gi|260221788|emb|CBA30701.1| Glycine-rich RNA-binding protein GRP1A [Curvibacter putative
symbiont of Hydra magnipapillata]
Length = 149
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ +S E L AFSQ G V+ A ++M++ RSKG+G+V ++ EAQ A++ MNG+
Sbjct: 16 LPYSFRDEDLQQAFSQHGSVSSAKVMMERDTGRSKGFGFVEMGSDAEAQTAISAMNGQQF 75
Query: 61 DGRVIFVDNVRP 72
GR + V+ RP
Sbjct: 76 GGRGLVVNEARP 87
>gi|195577213|ref|XP_002078467.1| GD23448 [Drosophila simulans]
gi|194190476|gb|EDX04052.1| GD23448 [Drosophila simulans]
Length = 608
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 45/70 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ +IMD RSKGYG++T+ ++A+KAL +NG L
Sbjct: 356 LHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNGFEL 415
Query: 61 DGRVIFVDNV 70
GR++ V NV
Sbjct: 416 AGRLMKVGNV 425
>gi|409050086|gb|EKM59563.1| hypothetical protein PHACADRAFT_250155 [Phanerochaete carnosa
HHB-10118-sp]
Length = 277
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 46/68 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S T + L + FS+FG+V + I+ D+ +RS+G+G++T ST EEA + + ++NG L
Sbjct: 83 LSIRTVERDLDEEFSRFGRVEKVVIVYDQRSDRSRGFGFITMSTVEEASRCIKELNGVEL 142
Query: 61 DGRVIFVD 68
+GR I VD
Sbjct: 143 NGRRIRVD 150
>gi|329960883|ref|ZP_08299162.1| hypothetical protein HMPREF9446_00723 [Bacteroides fluxus YIT
12057]
gi|328532169|gb|EGF58973.1| hypothetical protein HMPREF9446_00723 [Bacteroides fluxus YIT
12057]
Length = 101
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++FSTT L D FS++G+V+ A +I D+ RS+G+G+V S + AQKA+ ++NG
Sbjct: 8 LNFSTTDADLNDLFSEYGEVSSARVITDRETGRSRGFGFVEMSDDTAAQKAIDELNGAEY 67
Query: 61 DGRVIFVDNVRP 72
D + I V+ RP
Sbjct: 68 DQKTISVNVARP 79
>gi|300113043|ref|YP_003759618.1| RNP-1 like RNA-binding protein [Nitrosococcus watsonii C-113]
gi|299538980|gb|ADJ27297.1| RNP-1 like RNA-binding protein [Nitrosococcus watsonii C-113]
Length = 118
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 49/78 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T E L AF +G+V+ A +I+DK NRSKG+G+V +++E+A+ A+ +M+ +
Sbjct: 25 LSYQVTDEDLRAAFENYGEVSSAKVIVDKFSNRSKGFGFVEMASKEDAETAIKEMHDSDI 84
Query: 61 DGRVIFVDNVRPSRRYNT 78
GR I V+ RP N
Sbjct: 85 KGRQIVVNEARPRNESNN 102
>gi|50286801|ref|XP_445830.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525136|emb|CAG58749.1| unnamed protein product [Candida glabrata]
Length = 425
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 43/68 (63%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+S E L F G V A ++ ++G +RS+GYGYV F + A+KA+ +M+GK +
Sbjct: 183 LSWSIDDEWLKQEFEHIGGVVAARVMYERGTDRSRGYGYVDFEDKSYAEKAVKEMHGKEI 242
Query: 61 DGRVIFVD 68
DGR I VD
Sbjct: 243 DGRPINVD 250
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 42/72 (58%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF+ ++ + + F +FG++ I + KG+GYV +++ ++A+KAL + G+ +
Sbjct: 284 LSFNADRDNIYEIFGKFGEIISVRIPTHPETEQPKGFGYVQYTSIDDAKKALEALQGEYI 343
Query: 61 DGRVIFVDNVRP 72
D R + +D P
Sbjct: 344 DNRPVRLDYSTP 355
>gi|357119205|ref|XP_003561336.1| PREDICTED: uncharacterized protein LOC100827239 [Brachypodium
distachyon]
Length = 314
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/79 (40%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T + L +AF +FG+V +A I++++ NR +G+G+VTFS + A+++M+ K L
Sbjct: 14 LSFHTDERKLEEAFRRFGKVVDAQIMLERHTNRHRGFGFVTFSDPRAVESAISEMHTKEL 73
Query: 61 DGRVIFVDNVRPSRRYNTD 79
DGR I V+ P + NTD
Sbjct: 74 DGRTISVNRAEP--KMNTD 90
>gi|194758325|ref|XP_001961412.1| GF14957 [Drosophila ananassae]
gi|190615109|gb|EDV30633.1| GF14957 [Drosophila ananassae]
Length = 594
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 45/70 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ +IMD RSKGYG++T+ ++A+KAL +NG L
Sbjct: 342 LHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNGFEL 401
Query: 61 DGRVIFVDNV 70
GR++ V NV
Sbjct: 402 AGRLMKVGNV 411
>gi|53804863|ref|YP_113486.1| RNA-binding protein [Methylococcus capsulatus str. Bath]
gi|53758624|gb|AAU92915.1| RNA-binding protein [Methylococcus capsulatus str. Bath]
Length = 95
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 42/63 (66%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFVDN 69
L F+ +G V A ++MD+ RS+G+G+V +++EAQ A+A +NGK +DGR + V+
Sbjct: 19 LERTFAAYGTVKSAQVVMDRATGRSRGFGFVEMGSDQEAQAAIAGLNGKEMDGRNLMVNE 78
Query: 70 VRP 72
RP
Sbjct: 79 ARP 81
>gi|363754371|ref|XP_003647401.1| hypothetical protein Ecym_6201 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891038|gb|AET40584.1| hypothetical protein Ecym_6201 [Eremothecium cymbalariae
DBVPG#7215]
Length = 448
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 41/68 (60%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+S E L F G V A +I ++G RS+GYGYV F + A+KA+ +M GK +
Sbjct: 218 LSWSIDDEWLKTEFEHIGGVISARVIYERGTERSRGYGYVDFEDKSYAEKAIKEMQGKEI 277
Query: 61 DGRVIFVD 68
DGR I VD
Sbjct: 278 DGRPINVD 285
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF+ ++ + + F +G + I N+ KG+GYV +++ EEAQKAL + G+ +
Sbjct: 319 LSFNADRDNIFELFKDYGSIISVRIPTHPETNQPKGFGYVQYASIEEAQKALDKLQGEYI 378
Query: 61 DGRVIFVDNVRP 72
D R + +D P
Sbjct: 379 DNRPVRLDFSSP 390
>gi|330847369|gb|AEC46650.1| cold inducible RNA binding protein transcript variant 2 [Sus
scrofa]
Length = 182
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 47/73 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+ +G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRDFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|326523287|dbj|BAJ88684.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 422
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++ T EML DAF + G V A ++ D RS+GYG+V +ST+EE +A+ +NG +
Sbjct: 348 LSWTVTPEMLTDAFQRCGNVVGARVLYDGETGRSRGYGFVCYSTKEEMDQAIETLNGTEI 407
Query: 61 DGRVIFVDNVRPSRRY 76
+GR I V N+ +RY
Sbjct: 408 EGREIRV-NLALGKRY 422
Score = 37.7 bits (86), Expect = 0.76, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 25 IIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFVDNVRPSRRYNTDAPL 82
++ D+ RS+G+ +VT ST E+ ++ + +++G L GR + V + R APL
Sbjct: 281 VLYDRTTGRSRGFAFVTMSTLEDCERVIKNLDGTLYSGRTM---RVNMADRPKPKAPL 335
>gi|209154564|gb|ACI33514.1| RNA-binding protein 39 [Salmo salar]
Length = 525
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T+EML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 256 LHFNITEEMLRGIFEPFGKIESIQLMMDSETGRSKGYGFITFSDTECAKKALDQLNGFEL 315
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 316 AGRPMKVGHV 325
>gi|326509231|dbj|BAJ91532.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510271|dbj|BAJ87352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 252
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 48/67 (71%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++T + L DAFS +G++ +A II+D+ RS+G+G++T++ EE+A A+ ++GK L
Sbjct: 38 LSYTTDEGSLRDAFSHYGEIIDAKIIVDRDTGRSRGFGFITYAAEEQASSAIMALDGKDL 97
Query: 61 DGRVIFV 67
GR + V
Sbjct: 98 HGRNLRV 104
>gi|9964085|gb|AAG09816.1|AF278702_1 cold-inducible RNA binding protein XCIRP-1 [Xenopus laevis]
Length = 166
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 48/73 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F T + L AF+++G+++E ++ D+ RS+G+G+VTF ++A+ A+ MNGK +
Sbjct: 12 LNFETNEGCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMAMNGKSV 71
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 72 DGRQIRVDQAGKS 84
>gi|328948645|ref|YP_004365982.1| RNP-1 like RNA-binding protein [Treponema succinifaciens DSM
2489]
gi|328448969|gb|AEB14685.1| RNP-1 like RNA-binding protein [Treponema succinifaciens DSM
2489]
Length = 109
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++TT++ L+ FS +G V ATII+D+ N+SKG+G+V E KA+A + GK +
Sbjct: 10 LSYATTQDTLSSLFSAYGNVVSATIIIDRDTNQSKGFGFVEMEDPAETDKAIAKLAGKEV 69
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 70 DGRKIRVN 77
>gi|350535477|ref|NP_001233126.1| cold-inducible RNA-binding protein [Sus scrofa]
gi|330847371|gb|AEC46651.1| cold inducible RNA binding protein transcript variant 3 [Sus
scrofa]
Length = 144
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 47/73 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+ +G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRDFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|168008942|ref|XP_001757165.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691663|gb|EDQ78024.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 161
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++TT + L + F +FG V EA +I+DK S+G+G+V F E +A+ ++GK L
Sbjct: 14 LSWNTTDKGLEEEFRRFGNVLEAKVIVDKETGHSRGFGFVNFGDERSMDEAIERLHGKEL 73
Query: 61 DGRVIFVDNVRP 72
DGR I V+ +P
Sbjct: 74 DGRPITVNRAKP 85
>gi|357473273|ref|XP_003606921.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507976|gb|AES89118.1| Glycine-rich RNA binding protein [Medicago truncatula]
Length = 164
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 49/72 (68%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T E L AFSQ+G++ ++ II D+ RS+G+G+VTF+ E+ + A+ MNG+ +
Sbjct: 15 LAWATDSEALEKAFSQYGEIIDSKIINDRETGRSRGFGFVTFADEKSMRDAIEGMNGQDM 74
Query: 61 DGRVIFVDNVRP 72
DGR I V+ +
Sbjct: 75 DGRNITVNEAQS 86
>gi|544416|sp|Q05966.1|GRP10_BRANA RecName: Full=Glycine-rich RNA-binding protein 10
gi|17819|emb|CAA78513.1| glycine-rich RNA binding protein [Brassica napus]
Length = 169
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L FSQFG+V ++ II D+ RS+G+G+VTF E+ + A+ +MNGK L
Sbjct: 13 LAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDEMNGKEL 72
Query: 61 DGRVIFVDNVRP 72
DGR I V+ +
Sbjct: 73 DGRTITVNEAQS 84
>gi|381207415|ref|ZP_09914486.1| RNA-binding region RNP-1 (RNA recognition motif) [SAR324 cluster
bacterium JCVI-SC AAA005]
Length = 117
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 47/68 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++S T+E L DAF QFG+V + +IIMD+ RSKG+G+V + EA+ A+ +N + +
Sbjct: 34 LAYSVTEEQLRDAFGQFGEVDKVSIIMDRMTGRSKGFGFVEMQDDSEAEAAIRGLNEQPI 93
Query: 61 DGRVIFVD 68
+GR + V+
Sbjct: 94 NGRAVRVN 101
>gi|432865704|ref|XP_004070572.1| PREDICTED: embryonic polyadenylate-binding protein-like [Oryzias
latipes]
Length = 624
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Query: 6 TKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVI 65
T E L +AFS FG+ ++ D+ K RS+G+G+V ++ E+AQKA+ +MNGK ++G++I
Sbjct: 203 TDEKLKEAFSAFGKTLSVRVMRDE-KGRSRGFGFVNYAHHEDAQKAVDEMNGKEMNGKII 261
Query: 66 FVDNVRPSRRYNTDAPLARQLPQ 88
+V R +R L R+ Q
Sbjct: 262 YVG--RAQKRLERQGELKRKFDQ 282
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S + L D FS FG + ++ D+ SKGYG+V F T+E A +A+ MNG LL+ R
Sbjct: 109 SIDNKALYDTFSAFGNILSCKVVCDE--RGSKGYGFVHFETQEAANRAIETMNGMLLNDR 166
Query: 64 VIFVDNVR 71
+FV + +
Sbjct: 167 KVFVGHFK 174
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S E L FS +G +T A ++ + G+ SKG+G+V FS+ EEA KA+ +MNG+++ +
Sbjct: 304 SIDDERLRKEFSPYGTITSAKVMTEAGQ--SKGFGFVCFSSPEEATKAVTEMNGRIVATK 361
Query: 64 VIFV 67
++V
Sbjct: 362 PLYV 365
>gi|108710322|gb|ABF98117.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
Length = 153
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 47/68 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L AFS +G++ ++ II D+ RS+G+G+VTFS+E+ + A+ MNGK L
Sbjct: 15 LAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEGMNGKEL 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRNITVN 82
>gi|50881454|gb|AAT85299.1| glycine-rich RNA-binding protein, putative [Oryza sativa Japonica
Group]
gi|108710320|gb|ABF98115.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
gi|154550663|gb|ABS83497.1| receptor-like serine threonine kinase [Oryza sativa Japonica
Group]
gi|169244423|gb|ACA50485.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|215697732|dbj|BAG91726.1| unnamed protein product [Oryza sativa Japonica Group]
gi|306415943|gb|ADM86846.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
Length = 162
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 47/68 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L AFS +G++ ++ II D+ RS+G+G+VTFS+E+ + A+ MNGK L
Sbjct: 15 LAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEGMNGKEL 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRNITVN 82
>gi|442771473|gb|AGC72159.1| RNA-binding protein [uncultured bacterium A1Q1_fos_560]
Length = 98
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 3 FSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDG 62
+STT++ L+D F+ G VT A II DK +S+G+G+V S + EAQ A+ +NG G
Sbjct: 12 YSTTEQQLSDLFAVHGAVTSARIITDKFTGQSRGFGFVEMSGDSEAQAAINALNGTQFGG 71
Query: 63 RVIFVDNVRP 72
R + V+ RP
Sbjct: 72 RTLTVNEARP 81
>gi|365986018|ref|XP_003669841.1| hypothetical protein NDAI_0D02840 [Naumovozyma dairenensis CBS 421]
gi|343768610|emb|CCD24598.1| hypothetical protein NDAI_0D02840 [Naumovozyma dairenensis CBS 421]
Length = 426
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+S E L F G V A +I ++G +RS+GYGYV F + A+KA+ +M GK +
Sbjct: 178 LSWSIDDEWLKKEFEHIGGVVGARVIYERGTDRSRGYGYVDFEDKSYAEKAIQEMQGKEI 237
Query: 61 DGRVIFVD 68
DGR I VD
Sbjct: 238 DGRPINVD 245
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF+ K+ + + FS++G++ I + KG+GYV FS E+A+KAL + G+ +
Sbjct: 277 LSFNADKDNIYETFSKYGEIISVRIPTHPETEQPKGFGYVQFSNIEDAKKALEGLQGEYI 336
Query: 61 DGRVIFVDNVRP 72
D R + +D P
Sbjct: 337 DNRAVRLDYSTP 348
>gi|380012525|ref|XP_003690330.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39-like [Apis
florea]
Length = 506
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ +IMD RSKGYG++TF ++A+KAL +NG L
Sbjct: 252 LHFNITEDMLRGIFEPFGKIDNIQLIMDPXTGRSKGYGFLTFRNADDAKKALEQLNGFEL 311
Query: 61 DGRVIFVDNV 70
GR + V NV
Sbjct: 312 AGRPMKVGNV 321
>gi|327271804|ref|XP_003220677.1| PREDICTED: embryonic polyadenylate-binding protein-like [Anolis
carolinensis]
Length = 635
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S + L D FS FG + ++ D+ N S+GYG+V F T E A +A+A MNG LL+ R
Sbjct: 109 SIDNKALYDTFSAFGNILSCKVVCDE--NGSRGYGFVHFETHEAANRAIATMNGMLLNDR 166
Query: 64 VIFVDNVRPSRR 75
+FV N + SRR
Sbjct: 167 KVFVGNFK-SRR 177
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Query: 6 TKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVI 65
+ E L + FS FG+ ++ D RSKG+G+V F ++AQKA+ DMNGK ++GR++
Sbjct: 203 SNERLQETFSIFGKTLSVKVMTDN-IGRSKGFGFVNFEKHQDAQKAVEDMNGKEINGRML 261
Query: 66 FVDNVRPSRRYNTDAPLARQLPQSPEE 92
+V R +R + L R+ Q +E
Sbjct: 262 YVG--RAQKRMERQSELKRKFEQIKQE 286
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L FS +G +T A ++ + G SKG+G+V FS+ EEA KA+ +MNG+++ + ++V
Sbjct: 308 ERLRKEFSPYGTITSAKVMTEGG--HSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYV 365
>gi|116791319|gb|ABK25933.1| unknown [Picea sitchensis]
Length = 221
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 48/68 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ + L ++F+++G+V EA II D+ RS+G+G+++F++ EEA A+ M+GK L
Sbjct: 47 LSYGMDDQSLRESFTEYGEVIEARIIHDRETGRSRGFGFISFTSNEEAAAAITGMDGKDL 106
Query: 61 DGRVIFVD 68
GR++ V+
Sbjct: 107 HGRLVHVN 114
>gi|356526497|ref|XP_003531854.1| PREDICTED: uncharacterized protein LOC100818300 [Glycine max]
Length = 245
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 48/68 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ST L ++F+++G+V + +IMD+ RS+G+G++TF+T E+A A+ M+G+ L
Sbjct: 47 ISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFITFATSEDASSAIQGMDGQDL 106
Query: 61 DGRVIFVD 68
GR I V+
Sbjct: 107 HGRRIRVN 114
>gi|356538787|ref|XP_003537882.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Glycine
max]
Length = 170
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ T + L AFS +G + E+ +I D+ RS+G+G+VTF++E+ + A+A MNG+ L
Sbjct: 15 LAWVTGNDALEKAFSIYGDIVESKVINDRETGRSRGFGFVTFASEQSMKDAIAGMNGQDL 74
Query: 61 DGRVIFVD--NVRPSR 74
DGR I V+ R SR
Sbjct: 75 DGRNITVNEAQTRASR 90
>gi|328952775|ref|YP_004370109.1| RNP-1 like RNA-binding protein [Desulfobacca acetoxidans DSM
11109]
gi|328453099|gb|AEB08928.1| RNP-1 like RNA-binding protein [Desulfobacca acetoxidans DSM
11109]
Length = 97
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 48/75 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T+E L FS+ G VT A II D+ + +G+G+V T+ E +KA++ +NG+ +
Sbjct: 10 LSFEMTEEQLGTLFSEAGPVTSAKIITDRQTGQPRGFGFVEMETKSEGRKAISMLNGRTV 69
Query: 61 DGRVIFVDNVRPSRR 75
DGR + V+ +P ++
Sbjct: 70 DGRPLAVNEAKPQQK 84
>gi|229367642|gb|ACQ58801.1| Cold-inducible RNA-binding protein [Anoplopoma fimbria]
Length = 179
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 45/68 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T +E LA AF ++G + + +I D+ +S+G+G+V + E+A+ A+ MNG+ L
Sbjct: 12 LSFETNEESLAAAFGKYGTIEKVDVIRDRETEKSRGFGFVKYDNAEDAKDAMDGMNGQTL 71
Query: 61 DGRVIFVD 68
DGR I VD
Sbjct: 72 DGRTIRVD 79
>gi|397642327|gb|EJK75167.1| hypothetical protein THAOC_03118, partial [Thalassiosira
oceanica]
Length = 452
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ +ST + L F FG VT+ + M++G +R +G+G+VT ST + A+ A+A M+ L
Sbjct: 26 LDYSTDEPQLRSVFGAFGAVTDVFLPMERGTSRPRGFGFVTLSTRQAAEDAIAKMDQSQL 85
Query: 61 DGRVIFVDNVRP 72
DGR I V+ RP
Sbjct: 86 DGRTIRVNESRP 97
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T +E + F Q+G V++ + D+ R +G+ +VT +EA+ A +NG L
Sbjct: 135 LSFDTNEEAVRSMFEQYGTVSDCFLPSDRDTGRPRGFAFVTMPA-KEAETACNKVNGMEL 193
Query: 61 DGRVIFVDNVRP 72
DGR + V+ +P
Sbjct: 194 DGRTVRVNEAQP 205
>gi|330847367|gb|AEC46649.1| cold inducible RNA binding protein transcript variant 1 [Sus
scrofa]
Length = 172
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 47/73 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF T ++ L FS++GQ++E ++ D+ RS+ +G+VTF ++A+ A+ MNGK +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRDFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD S
Sbjct: 73 DGRQIRVDQAGKS 85
>gi|226505736|ref|NP_001150149.1| LOC100283778 [Zea mays]
gi|195605606|gb|ACG24633.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195606158|gb|ACG24909.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195637130|gb|ACG38033.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195645710|gb|ACG42323.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|238009788|gb|ACR35929.1| unknown [Zea mays]
gi|413951537|gb|AFW84186.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 156
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 48/66 (72%), Gaps = 2/66 (3%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFVD- 68
L +AFS FG+VTEA +I D+ RS+G+G+V +S + A++A++ M+GK +DGR + V+
Sbjct: 53 LREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNM 112
Query: 69 -NVRPS 73
N RP+
Sbjct: 113 ANERPA 118
>gi|312282683|dbj|BAJ34207.1| unnamed protein product [Thellungiella halophila]
Length = 166
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L FSQFG+V ++ II D+ RS+G+G+VTF E+ + A+ +MNGK L
Sbjct: 14 LAWATADADLERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEEMNGKEL 73
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 74 DGRSITVN 81
>gi|399931807|gb|AFP57453.1| RNA-binding glycine-rich protein [Nicotiana rustica]
Length = 144
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 45/67 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T + L DAF+ FG V +A +I+D+ RS+G+G+V FS +E A +A+ M+G+ L
Sbjct: 45 LSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIKAMDGQEL 104
Query: 61 DGRVIFV 67
GR I V
Sbjct: 105 QGRNIRV 111
>gi|399931799|gb|AFP57449.1| RNA-binding glycine-rich protein [Nicotiana glauca]
Length = 144
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 45/67 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T + L DAF+ FG V +A +I+D+ RS+G+G+V FS +E A +A+ M+G+ L
Sbjct: 45 LSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIKAMDGQEL 104
Query: 61 DGRVIFV 67
GR I V
Sbjct: 105 QGRNIRV 111
>gi|255568699|ref|XP_002525321.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223535380|gb|EEF37054.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 126
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 42/63 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+S ++ L DAFS FG+V+E I+ DK RS+G+G+V FS E EA A M+GK L
Sbjct: 32 LSWSVDEKSLKDAFSSFGEVSEVRIMYDKDSGRSRGFGFVNFSKENEAVCAKDAMDGKAL 91
Query: 61 DGR 63
GR
Sbjct: 92 LGR 94
>gi|223938363|ref|ZP_03630257.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
gi|223892932|gb|EEF59399.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
Length = 127
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T+ L D F+Q G VT +IMDK R +G+G+VT T+E AQ A+ +NG
Sbjct: 10 LPFTATENELQDMFAQHGPVTSVDLIMDKFSGRPRGFGFVTMETQEGAQAAVQALNGTDF 69
Query: 61 DGRVIFVDNVRP 72
GR + V+ RP
Sbjct: 70 GGRPLTVNEARP 81
>gi|399931797|gb|AFP57448.1| RNA-binding glycine-rich protein [Nicotiana clevelandii]
Length = 144
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 45/67 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T + L DAF+ FG V +A +I+D+ RS+G+G+V FS +E A +A+ M+G+ L
Sbjct: 45 LSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIKAMDGQEL 104
Query: 61 DGRVIFV 67
GR I V
Sbjct: 105 QGRNIRV 111
>gi|357462205|ref|XP_003601384.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355490432|gb|AES71635.1| Glycine-rich RNA-binding protein [Medicago truncatula]
Length = 135
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+S ++ L DAFS FG VTE I+ DK R++G+G+V FS E+ A+ A M+GK L
Sbjct: 43 LSWSVDEKSLKDAFSSFGDVTEVRIVYDKDSGRARGFGFVIFSNEDAAKSAKDAMDGKAL 102
Query: 61 DGR 63
GR
Sbjct: 103 LGR 105
>gi|413939453|gb|AFW74004.1| hypothetical protein ZEAMMB73_282165 [Zea mays]
Length = 287
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 45/68 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++ T EML +AF + G V A ++ D RS+GYG+V +ST EE +AL+ +NG +
Sbjct: 214 LSWTVTSEMLTEAFGRCGTVVGARVLYDGETGRSRGYGFVCYSTREEMDEALSSLNGMEM 273
Query: 61 DGRVIFVD 68
+GR + V+
Sbjct: 274 EGREMRVN 281
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVI---F 66
LA ++ ++ D+ RS+G+ +VT +T ++ + + +++G L GR + F
Sbjct: 132 LAGIVQEYASPEMVEVLYDRTTGRSRGFAFVTMTTVQDCELVIKNLDGSLYGGRTMKVNF 191
Query: 67 VDNVRP 72
D +P
Sbjct: 192 ADRPKP 197
>gi|399931805|gb|AFP57452.1| RNA-binding glycine-rich protein [Nicotiana repanda]
Length = 144
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 45/67 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T + L DAF+ FG V +A +I+D+ RS+G+G+V FS +E A +A+ M+G+ L
Sbjct: 45 LSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIKAMDGQEL 104
Query: 61 DGRVIFV 67
GR I V
Sbjct: 105 QGRNIRV 111
>gi|356526775|ref|XP_003531992.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Glycine max]
Length = 146
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T + +L DAF Q G++ E +I D +S+GYG+V F +E A +MNG++L
Sbjct: 65 LSYDTNEPVLRDAFGQHGEIIEVKVICDHVTGKSRGYGFVRFLSETIAAATHKEMNGQIL 124
Query: 61 DGRVIFVDNVRPSRR 75
DGR I V R
Sbjct: 125 DGRCIRVSYAHKGER 139
>gi|219363077|ref|NP_001137027.1| uncharacterized protein LOC100217196 [Zea mays]
gi|194698058|gb|ACF83113.1| unknown [Zea mays]
Length = 287
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 45/68 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++ T EML +AF + G V A ++ D RS+GYG+V +ST EE +AL+ +NG +
Sbjct: 214 LSWTVTSEMLTEAFGRCGTVVGARVLYDGETGRSRGYGFVCYSTREEMDEALSSLNGMEM 273
Query: 61 DGRVIFVD 68
+GR + V+
Sbjct: 274 EGREMRVN 281
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVI---F 66
LA ++ ++ D+ RS+G+ +VT +T ++ + + +++G L GR + F
Sbjct: 132 LAGIVQEYASPEMVEVLYDRTTGRSRGFAFVTMTTVQDCELVIKNLDGSLYGGRTMKVNF 191
Query: 67 VDNVRP 72
D +P
Sbjct: 192 ADRPKP 197
>gi|297733872|emb|CBI15119.3| unnamed protein product [Vitis vinifera]
Length = 163
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 48/68 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ST L +AF ++G+V EA +I+D+ RS+G+G+VTF++ EEA A+ ++G+ L
Sbjct: 47 LSYSTDDTSLREAFHKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQDL 106
Query: 61 DGRVIFVD 68
GR + V+
Sbjct: 107 HGRRVRVN 114
>gi|356538789|ref|XP_003537883.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Glycine
max]
Length = 140
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 45/68 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L AFS +G + E+ II D+ RS+G+G+VTF++E + A+ MNG+ L
Sbjct: 15 LAWATDDHALEKAFSHYGNIVESKIINDRETGRSRGFGFVTFASENSMKDAIEGMNGQNL 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRNITVN 82
>gi|332019312|gb|EGI59819.1| RNA-binding protein 39 [Acromyrmex echinatior]
Length = 528
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ +IMD RSKGYG++TF ++A+KAL +NG L
Sbjct: 274 LHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFEL 333
Query: 61 DGRVIFVDNV 70
GR + V NV
Sbjct: 334 AGRPMKVGNV 343
>gi|168034588|ref|XP_001769794.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678903|gb|EDQ65356.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 400
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFVDN 69
L + F +G++ + MD+ N KGYGYV F +A+KALA M+G +DG V+
Sbjct: 102 LKEIFGLYGEIVHVELAMDRTVNLPKGYGYVEFKRRGDAEKALAHMDGGQIDGNVVSAQF 161
Query: 70 VRPSRRYNTDAPLARQLPQSPE 91
+ RR T P+ RQ+ +P+
Sbjct: 162 ILVPRRKPTPPPVKRQVSPAPK 183
>gi|356563602|ref|XP_003550050.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
[Glycine max]
Length = 160
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ ST++ L FS+FG+VT + +DK +S G+ Y+ F EE AQ A+ +MNGK
Sbjct: 75 LPLSTSEGHLMKVFSEFGEVTLIQLPIDKESGQSLGFAYIWFVKEESAQLAVLEMNGKFF 134
Query: 61 DGRVIFVDNVRP 72
GR I+V +P
Sbjct: 135 YGRFIYVTIAKP 146
>gi|332142478|ref|YP_004428216.1| hypothetical protein MADE_1015430 [Alteromonas macleodii str.
'Deep ecotype']
gi|410862690|ref|YP_006977924.1| hypothetical protein amad1_15375 [Alteromonas macleodii AltDE1]
gi|327552500|gb|AEA99218.1| hypothetical protein MADE_1015430 [Alteromonas macleodii str.
'Deep ecotype']
gi|410819952|gb|AFV86569.1| hypothetical protein amad1_15375 [Alteromonas macleodii AltDE1]
Length = 117
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S T+E L D F +FG + ++MD+ N SKG+G+V ST+EE KA+ +N K++DG+
Sbjct: 11 SFTQENLEDLFFEFGTIASCDLVMDEATNLSKGFGFVEMSTQEETDKAIEKLNAKVIDGK 70
Query: 64 VIFV 67
I V
Sbjct: 71 KIRV 74
>gi|365760560|gb|EHN02272.1| Nsr1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 371
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+S E L F G V A +I ++G +RS+GYGYV F + A+KA+ +M GK +
Sbjct: 148 LSWSIDDEWLKKEFEHIGGVISARVINERGTDRSRGYGYVDFENKSYAEKAIQEMQGKEI 207
Query: 61 DGRVIFVD 68
DGR I D
Sbjct: 208 DGRPINCD 215
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF+ ++ + + F++ G+V I + KG+GYV FS+ E+++KAL + G+ +
Sbjct: 249 LSFNADRDTIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSSLEDSKKALESLQGEYI 308
Query: 61 DGRVIFVDNVRPSRRYNTD 79
D R + +D P R N D
Sbjct: 309 DNRPVRLDYSSP--RPNND 325
>gi|9293999|dbj|BAB01902.1| unnamed protein product [Arabidopsis thaliana]
Length = 396
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKL- 59
+SF T+++ L AF FG++ E IIMDK RSKGY ++ ++TEE A AL +MNGK+
Sbjct: 289 LSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFLEYTTEEAAGTALKEMNGKVN 348
Query: 60 LDGRVIFVDNVRPSRRY 76
LD R + ++ ++ Y
Sbjct: 349 LDFRDLKAKSLLSTQNY 365
>gi|307180960|gb|EFN68748.1| RNA-binding protein 39 [Camponotus floridanus]
Length = 529
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ +IMD RSKGYG++TF ++A+KAL +NG L
Sbjct: 275 LHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFEL 334
Query: 61 DGRVIFVDNV 70
GR + V NV
Sbjct: 335 AGRPMKVGNV 344
>gi|297802026|ref|XP_002868897.1| hypothetical protein ARALYDRAFT_490700 [Arabidopsis lyrata subsp.
lyrata]
gi|297314733|gb|EFH45156.1| hypothetical protein ARALYDRAFT_490700 [Arabidopsis lyrata subsp.
lyrata]
Length = 164
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L FSQFG V ++ II D+ RS+G+G+VTF E+ + A+ +MNGK L
Sbjct: 13 LAWATQDHDLERTFSQFGDVLDSKIINDRETGRSRGFGFVTFKDEKAMRDAIEEMNGKEL 72
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 73 DGRTITVN 80
>gi|383864354|ref|XP_003707644.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Megachile
rotundata]
Length = 507
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ +IMD RSKGYG++TF ++A+KAL +NG L
Sbjct: 253 LHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFEL 312
Query: 61 DGRVIFVDNV 70
GR + V NV
Sbjct: 313 AGRPMKVGNV 322
>gi|297736978|emb|CBI26179.3| unnamed protein product [Vitis vinifera]
Length = 156
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
ST + L AFSQFG+V++ I +K ++ G+ + F+TEE AQ A+ M+GK GR
Sbjct: 74 STCEGSLKKAFSQFGEVSKVRIKRNKISSQPLGFAFAWFTTEESAQLAVKMMDGKFFHGR 133
Query: 64 VIFVDNVR--PSRRYNTDAP 81
+FV + PS+R+ AP
Sbjct: 134 FVFVKIAKPGPSKRHVKAAP 153
>gi|442761059|gb|JAA72688.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Ixodes ricinus]
Length = 235
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ + +I D NRSKGYG++TF E+A+KAL +NG L
Sbjct: 152 LHFNITEDMLKGIFEPFGKIDKIELIKDMETNRSKGYGFITFHDSEDAKKALEQLNGFEL 211
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 212 AGRPMKVGHV 221
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFVDN 69
L + FS G+V + +IMD RSKG YV F E A+ +NG+ L G I V
Sbjct: 59 LEEFFSAVGKVRDVRLIMDNKTRRSKGIAYVEFQDVESVPLAMG-LNGQKLFGIPIVVQP 117
Query: 70 VRPSR 74
+ R
Sbjct: 118 TQAER 122
>gi|356515780|ref|XP_003526576.1| PREDICTED: protein boule-like [Glycine max]
Length = 287
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 46/78 (58%), Gaps = 6/78 (7%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ T E + F QFG + EA II DK +SKGYG+VTF +E A++A AD N ++
Sbjct: 45 LAWETPTEEMRKYFEQFGDILEAVIITDKNTGKSKGYGFVTFCGQESARRACADPN-PII 103
Query: 61 DGR-----VIFVDNVRPS 73
DGR + + RPS
Sbjct: 104 DGRRANCNIASLGRTRPS 121
>gi|345569038|gb|EGX51907.1| hypothetical protein AOL_s00043g641 [Arthrobotrys oligospora ATCC
24927]
Length = 512
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 44/72 (61%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF+ +E L A S+ G+VT I DK KG+ YVTFST +EA+KA A MNG+ +
Sbjct: 361 LSFNADEEALGAAMSEHGEVTSVRIPTDKDTGNKKGFAYVTFSTIDEAKKAHAAMNGQQV 420
Query: 61 DGRVIFVDNVRP 72
GR I D +P
Sbjct: 421 CGRSIRTDYSQP 432
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++ ++ L F V A ++ D +NRSKG GYV F+T +A+KALA+ G +
Sbjct: 260 LSWNVDEDWLRREFEDVATVENARVVWDNQRNRSKGIGYVDFATRADAEKALAEKQGAEI 319
Query: 61 DGRVIFVD 68
DGR I +D
Sbjct: 320 DGRPINLD 327
>gi|336272443|ref|XP_003350978.1| hypothetical protein SMAC_04282 [Sordaria macrospora k-hell]
gi|380090745|emb|CCC04915.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 192
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 46/68 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++T ML F +FG V EA ++ D+ RS+G+G+V ++ + +A+ A+A+M+G+
Sbjct: 9 LSWNTDDNMLRAKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYANDADAENAIANMDGQEF 68
Query: 61 DGRVIFVD 68
DGR + VD
Sbjct: 69 DGRRVRVD 76
>gi|189237575|ref|XP_974855.2| PREDICTED: similar to splicing factor [Tribolium castaneum]
Length = 501
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 43/70 (61%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ +IMD RSKGYG++ F E+A+KAL +NG L
Sbjct: 248 LHFNITEDMLRSIFEPFGKIDNIQLIMDPETGRSKGYGFIAFRNCEDAKKALEQLNGFEL 307
Query: 61 DGRVIFVDNV 70
GR + V NV
Sbjct: 308 AGRPMKVGNV 317
>gi|399931811|gb|AFP57455.1| RNA-binding glycine-rich protein [Nicotiana undulata]
Length = 144
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 45/67 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T + L DAF+ FG V +A +I+D+ RS+G+G+V FS +E A +A+ M+G+ L
Sbjct: 45 LSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIKAMDGQEL 104
Query: 61 DGRVIFV 67
GR I V
Sbjct: 105 QGRNIRV 111
>gi|383864352|ref|XP_003707643.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Megachile
rotundata]
Length = 530
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ +IMD RSKGYG++TF ++A+KAL +NG L
Sbjct: 276 LHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFEL 335
Query: 61 DGRVIFVDNV 70
GR + V NV
Sbjct: 336 AGRPMKVGNV 345
>gi|225457213|ref|XP_002284026.1| PREDICTED: uncharacterized protein LOC100256940 [Vitis vinifera]
Length = 277
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 48/68 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ST L +AF ++G+V EA +I+D+ RS+G+G+VTF++ EEA A+ ++G+ L
Sbjct: 47 LSYSTDDTSLREAFHKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQDL 106
Query: 61 DGRVIFVD 68
GR + V+
Sbjct: 107 HGRRVRVN 114
>gi|270007747|gb|EFA04195.1| hypothetical protein TcasGA2_TC014444 [Tribolium castaneum]
Length = 522
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 43/70 (61%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ +IMD RSKGYG++ F E+A+KAL +NG L
Sbjct: 269 LHFNITEDMLRSIFEPFGKIDNIQLIMDPETGRSKGYGFIAFRNCEDAKKALEQLNGFEL 328
Query: 61 DGRVIFVDNV 70
GR + V NV
Sbjct: 329 AGRPMKVGNV 338
>gi|357451851|ref|XP_003596202.1| RNA-binding protein with serine-rich domain-containing protein
[Medicago truncatula]
gi|355485250|gb|AES66453.1| RNA-binding protein with serine-rich domain-containing protein
[Medicago truncatula]
Length = 415
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 46/83 (55%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S + + L + FS FG+V ++MD+ N KGYGYV F T EA+KAL M+G +
Sbjct: 107 LSRNVNEGHLKEIFSNFGEVVSVELVMDRAVNLPKGYGYVHFKTRGEAEKALLYMDGAQI 166
Query: 61 DGRVIFVDNVRPSRRYNTDAPLA 83
DG V+ P R+ + P A
Sbjct: 167 DGNVVKARFTLPPRQKASPPPKA 189
>gi|350410158|ref|XP_003488966.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Bombus impatiens]
Length = 532
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ +IMD RSKGYG++TF ++A+KAL +NG L
Sbjct: 278 LHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFEL 337
Query: 61 DGRVIFVDNV 70
GR + V NV
Sbjct: 338 AGRPMKVGNV 347
>gi|242215700|ref|XP_002473663.1| predicted protein [Postia placenta Mad-698-R]
gi|220727201|gb|EED81127.1| predicted protein [Postia placenta Mad-698-R]
Length = 638
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 47/68 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S TT+ L D FS++G+V + I+ D+ +RS+G+G++T ST +EA + + ++NG L
Sbjct: 60 LSIRTTERDLDDEFSRYGRVEKVVIVYDQRSDRSRGFGFITMSTTDEAGRCIKELNGVDL 119
Query: 61 DGRVIFVD 68
+GR I VD
Sbjct: 120 NGRRIRVD 127
>gi|350410161|ref|XP_003488967.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Bombus impatiens]
Length = 508
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ +IMD RSKGYG++TF ++A+KAL +NG L
Sbjct: 254 LHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFEL 313
Query: 61 DGRVIFVDNV 70
GR + V NV
Sbjct: 314 AGRPMKVGNV 323
>gi|340718900|ref|XP_003397900.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Bombus
terrestris]
Length = 508
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ +IMD RSKGYG++TF ++A+KAL +NG L
Sbjct: 254 LHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFEL 313
Query: 61 DGRVIFVDNV 70
GR + V NV
Sbjct: 314 AGRPMKVGNV 323
>gi|21672973|ref|NP_661038.1| RNA-binding protein [Chlorobium tepidum TLS]
gi|21646033|gb|AAM71380.1| RNA-binding protein [Chlorobium tepidum TLS]
Length = 90
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 41/66 (62%)
Query: 3 FSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDG 62
+S T E L D FS+FGQV A II DK RSKG+G+V E EA++A+ MN K G
Sbjct: 10 YSVTDEDLRDKFSEFGQVHSANIITDKFSGRSKGFGFVDMPNESEAREAIDAMNDKDFKG 69
Query: 63 RVIFVD 68
R I V+
Sbjct: 70 RTIKVN 75
>gi|424843086|ref|ZP_18267711.1| RRM domain-containing RNA-binding protein [Saprospira grandis DSM
2844]
gi|395321284|gb|EJF54205.1| RRM domain-containing RNA-binding protein [Saprospira grandis DSM
2844]
Length = 126
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F TT E L + F+QFG V A IIMD+ +RSKG+G+V EE+ Q A+ +N
Sbjct: 8 LNFRTTSEELEELFAQFGTVDSAKIIMDRETDRSKGFGFVEMPDEEDGQAAIDALNETEF 67
Query: 61 DGRVIFVDNVRP 72
R I V RP
Sbjct: 68 HERTIVVKKARP 79
>gi|379728946|ref|YP_005321142.1| rnp-1 like RNA-binding protein [Saprospira grandis str. Lewin]
gi|378574557|gb|AFC23558.1| rnp-1 like RNA-binding protein [Saprospira grandis str. Lewin]
Length = 122
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F TT E L + F+QFG V A IIMD+ +RSKG+G+V EE+ Q A+ +N
Sbjct: 8 LNFRTTSEELEELFAQFGTVDSAKIIMDRETDRSKGFGFVEMPDEEDGQAAIDALNETEF 67
Query: 61 DGRVIFVDNVRP 72
R I V RP
Sbjct: 68 HERTIVVKKARP 79
>gi|418360878|ref|ZP_12961542.1| RNA-binding protein [Aeromonas salmonicida subsp. salmonicida
01-B526]
gi|356687961|gb|EHI52534.1| RNA-binding protein [Aeromonas salmonicida subsp. salmonicida
01-B526]
Length = 81
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 6 TKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVI 65
T + L FSQFGQV + II+D+ +SKG+G++ +A+KA+A ++G + GR I
Sbjct: 2 TADELTTVFSQFGQVDKVDIIIDRDTGQSKGFGFIEMPVNGDAEKAIAGLHGTEIGGRTI 61
Query: 66 FVDNVRPSRRYNTDAPLAR 84
V+ +P TDAP R
Sbjct: 62 TVNQAKP----KTDAPRGR 76
>gi|401842356|gb|EJT44580.1| NSR1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 393
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+S E L F G V A +I ++G +RS+GYGYV F + A+KA+ +M GK +
Sbjct: 148 LSWSIDDEWLKKEFEHIGGVISARVINERGTDRSRGYGYVDFENKSYAEKAIQEMQGKEI 207
Query: 61 DGRVIFVD 68
DGR I D
Sbjct: 208 DGRPINCD 215
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF+ ++ + + F++ G+V I + KG+GYV FS+ E+++KAL + G+ +
Sbjct: 249 LSFNADRDTIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSSLEDSKKALESLQGEYI 308
Query: 61 DGRVIFVDNVRPSRRYNTD 79
D R + +D P R N D
Sbjct: 309 DNRPVRLDYSSP--RPNND 325
>gi|346465875|gb|AEO32782.1| hypothetical protein [Amblyomma maculatum]
Length = 558
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ + +I D NRSKGYG++TF E+A+KAL +NG L
Sbjct: 306 LHFNITEDMLKGIFEPFGKIDKIELIKDMETNRSKGYGFITFHDSEDAKKALEQLNGFEL 365
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 366 AGRPMKVGHV 375
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFVDN 69
L + FS G+V + +IMD RSKG YV F E A+ +NG+ L G I V
Sbjct: 213 LEEFFSAVGKVRDVRLIMDNKTRRSKGIAYVEFLDVESVPLAMG-LNGQKLFGIPIVVQP 271
Query: 70 VRPSR 74
+ R
Sbjct: 272 TQAER 276
>gi|340718898|ref|XP_003397899.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Bombus
terrestris]
Length = 520
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ +IMD RSKGYG++TF ++A+KAL +NG L
Sbjct: 266 LHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFEL 325
Query: 61 DGRVIFVDNV 70
GR + V NV
Sbjct: 326 AGRPMKVGNV 335
>gi|328781105|ref|XP_624668.3| PREDICTED: RNA-binding protein 39-like [Apis mellifera]
Length = 506
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ +IMD RSKGYG++TF ++A+KAL +NG L
Sbjct: 252 LHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFEL 311
Query: 61 DGRVIFVDNV 70
GR + V NV
Sbjct: 312 AGRPMKVGNV 321
>gi|42571735|ref|NP_973958.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|14532532|gb|AAK63994.1| At1g33470/F10C21_14 [Arabidopsis thaliana]
gi|18655391|gb|AAL76151.1| At1g33470/F10C21_14 [Arabidopsis thaliana]
gi|332193476|gb|AEE31597.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 244
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ T K L + F QFG + EA +I DK RSKGYG+VTF E AQKA D ++
Sbjct: 14 LAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQKACVD-PAPVI 72
Query: 61 DGR 63
DGR
Sbjct: 73 DGR 75
>gi|327271618|ref|XP_003220584.1| PREDICTED: RNA-binding protein 39-like [Anolis carolinensis]
Length = 578
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 313 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 372
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 373 AGRPMKVGHV 382
>gi|116787988|gb|ABK24718.1| unknown [Picea sitchensis]
gi|148910800|gb|ABR18466.1| unknown [Picea sitchensis]
Length = 442
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ + TT E L FSQ+G++ E T+I DKG +SKGYG+VTF AQKAL D + K +
Sbjct: 98 LGWETTSEALKSVFSQYGELEECTVITDKGTGKSKGYGFVTFKHMVGAQKALKDPS-KKI 156
Query: 61 DGRV 64
D R+
Sbjct: 157 DSRM 160
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
VS E L + FS++G+V E + DK RS+G+ + E A+KAL + N K++
Sbjct: 189 VSADIPAEKLLNFFSKYGEVEEGPLGFDKHTGRSRGFALFVYKNAEGAKKALEEPN-KIV 247
Query: 61 DGRVI 65
+G +
Sbjct: 248 EGHSM 252
>gi|77166221|ref|YP_344746.1| RNA-binding protein, RNP-1 [Nitrosococcus oceani ATCC 19707]
gi|254435869|ref|ZP_05049376.1| RNA-binding protein [Nitrosococcus oceani AFC27]
gi|76884535|gb|ABA59216.1| RNA-binding protein, RNP-1 [Nitrosococcus oceani ATCC 19707]
gi|207088980|gb|EDZ66252.1| RNA-binding protein [Nitrosococcus oceani AFC27]
Length = 119
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 51/84 (60%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T E L AF +G+V+ A +I+DK NRSKG+G+V +++E+A+ A+ +M+ +
Sbjct: 25 LSYQVTDEDLRAAFENYGEVSSAKVIVDKFSNRSKGFGFVEMASKEDAEAAIKEMHDSDI 84
Query: 61 DGRVIFVDNVRPSRRYNTDAPLAR 84
GR + V+ RP + + R
Sbjct: 85 KGRQVVVNEARPRNESSNNGGFRR 108
>gi|42562492|ref|NP_174613.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|51970938|dbj|BAD44161.1| unknown protein [Arabidopsis thaliana]
gi|332193475|gb|AEE31596.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 245
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ T K L + F QFG + EA +I DK RSKGYG+VTF E AQKA D ++
Sbjct: 14 LAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQKACVD-PAPVI 72
Query: 61 DGR 63
DGR
Sbjct: 73 DGR 75
>gi|218199217|gb|EEC81644.1| hypothetical protein OsI_25179 [Oryza sativa Indica Group]
Length = 343
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 45/72 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ TT+ L AFS++G+V E +++++ RS+G+G+VTFS A+ M+ L
Sbjct: 14 LSWDTTERTLERAFSEYGKVIETQVVLERDTGRSRGFGFVTFSEPRAVDAAIRGMHNGEL 73
Query: 61 DGRVIFVDNVRP 72
DGR I V+ +P
Sbjct: 74 DGRTISVNKAQP 85
>gi|164427760|ref|XP_965121.2| hypothetical protein NCU02736 [Neurospora crassa OR74A]
gi|157071873|gb|EAA35885.2| predicted protein [Neurospora crassa OR74A]
Length = 200
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 45/68 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++T ML F +FG V EA ++ D+ RS+G+G+V + + +A+ A+A+M+G+
Sbjct: 9 LSWNTDDNMLRAKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYGNDADAENAIANMDGQEF 68
Query: 61 DGRVIFVD 68
DGR + VD
Sbjct: 69 DGRRVRVD 76
>gi|319902685|ref|YP_004162413.1| RNP-1 like RNA-binding protein [Bacteroides helcogenes P 36-108]
gi|319417716|gb|ADV44827.1| RNP-1 like RNA-binding protein [Bacteroides helcogenes P 36-108]
Length = 102
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++FSTT L D FS++G+V+ A +I D+ RS+G+ +V +E AQKA+ ++NG
Sbjct: 8 LNFSTTDADLNDLFSEYGEVSSARVITDRETGRSRGFAFVEMPDDEAAQKAIDELNGAEY 67
Query: 61 DGRVIFVDNVRP 72
D + I V+ RP
Sbjct: 68 DNKTISVNVARP 79
>gi|410931844|ref|XP_003979305.1| PREDICTED: RNA-binding protein 39-like, partial [Takifugu rubripes]
Length = 324
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T+EML F FG++ ++MD RSKGYG++TF+ E A+KAL +NG L
Sbjct: 149 LHFNITEEMLRGIFEPFGRIENIQLMMDTDTGRSKGYGFITFADAECAKKALEQLNGFEL 208
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 209 AGRPMKVGHV 218
>gi|225441175|ref|XP_002265930.1| PREDICTED: uncharacterized protein LOC100257264 [Vitis vinifera]
Length = 332
Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 51/72 (70%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ ++T++ L DAFS++G++ E+ ++M++ R +G+G++TF+ + A+ +M+G+ L
Sbjct: 14 LGWNTSERHLEDAFSRYGKILESLVMMERDTGRPRGFGFITFADHRAMEDAIREMHGREL 73
Query: 61 DGRVIFVDNVRP 72
DGRVI V+ +P
Sbjct: 74 DGRVISVNKAQP 85
>gi|76160980|gb|ABA40453.1| RNA binding protein-like protein [Solanum tuberosum]
gi|76160996|gb|ABA40461.1| RNA binding protein-like protein [Solanum tuberosum]
Length = 150
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 47/68 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T + L +AF+ FG V +A +I+D+ RS+G+G+V FS E+ A++A+ M+G+ L
Sbjct: 46 LSWGTDDQSLKEAFTSFGDVVDAKVIIDRDSGRSRGFGFVNFSDEDCAKEAMNAMDGQQL 105
Query: 61 DGRVIFVD 68
GR I V+
Sbjct: 106 HGRNIRVN 113
>gi|147900472|ref|NP_001086350.1| MGC81970 protein [Xenopus laevis]
gi|49522239|gb|AAH75146.1| MGC81970 protein [Xenopus laevis]
Length = 512
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 230 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 289
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 290 AGRPMKVGHV 299
>gi|195642478|gb|ACG40707.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 153
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 48/66 (72%), Gaps = 2/66 (3%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFVD- 68
L +AFS FG+VTEA +I D+ RS+G+G+V +S + A++A++ M+GK +DGR + V+
Sbjct: 53 LREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNM 112
Query: 69 -NVRPS 73
N RP+
Sbjct: 113 ANERPA 118
>gi|326931688|ref|XP_003211958.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39-like
[Meleagris gallopavo]
Length = 571
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 306 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 365
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 366 AGRPMKVGHV 375
>gi|390342940|ref|XP_001198098.2| PREDICTED: RNA-binding protein 39-like [Strongylocentrotus
purpuratus]
Length = 666
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ ++ T+ ML F FG++ ++MD NRSKGYG++TF E+A++AL +NG L
Sbjct: 312 LHYNITEAMLRGIFEPFGKIDNIQLMMDTDANRSKGYGFITFHDAEDAKRALDQLNGFEL 371
Query: 61 DGRVIFVDNVRPSRRYNTDAP 81
GR + V++V AP
Sbjct: 372 AGRPMKVNHVTERNEQGQQAP 392
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFVDN 69
L + FS G+V II D+ RSKG GYV + + AL N KLL +I
Sbjct: 224 LKEFFSSVGKVRTVKIITDRNSRRSKGVGYVEYDVADSVPLALGLNNQKLLGVPII---- 279
Query: 70 VRPSR 74
V+PS
Sbjct: 280 VQPSH 284
>gi|347756146|ref|YP_004863709.1| RNA-binding proteins (RRM domain) [Candidatus Chloracidobacterium
thermophilum B]
gi|347588663|gb|AEP13192.1| RNA-binding proteins (RRM domain) [Candidatus Chloracidobacterium
thermophilum B]
Length = 112
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF TT E L D FS+ G V A ++ D+ NRS+G+G+V F++ E+ +A+ +G
Sbjct: 8 LSFQTTSEDLRDHFSKAGTVESAQVVEDRDTNRSRGFGFVEFTSTEDGNRAIEMFHGTEF 67
Query: 61 DGRVIFVDNVRP 72
+GR + V+ RP
Sbjct: 68 NGRTLTVNEARP 79
>gi|330843751|ref|XP_003293810.1| hypothetical protein DICPUDRAFT_84328 [Dictyostelium purpureum]
gi|325075834|gb|EGC29677.1| hypothetical protein DICPUDRAFT_84328 [Dictyostelium purpureum]
Length = 292
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 46/70 (65%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
T +E L D F+QFG++ E TI++D S+G+G+VTF + +EA A++ ++ LDG V
Sbjct: 79 TREEDLRDTFAQFGKIAECTILVDPNTKESRGFGFVTFLSSDEATDAISRLDSSKLDGNV 138
Query: 65 IFVDNVRPSR 74
I V+ R S+
Sbjct: 139 IRVEKSRRSK 148
>gi|1346181|sp|P49311.1|GRP2_SINAL RecName: Full=Glycine-rich RNA-binding protein GRP2A
gi|496237|gb|AAA59213.1| homology with RNA-binding proteins in meristematic tissue
[Sinapis alba]
Length = 169
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 47/68 (69%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T + L AFSQFG++ ++ II D+ RS+G+G+VTF E+ + A+ MNG+ L
Sbjct: 15 LAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDL 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRSITVN 82
>gi|303316410|ref|XP_003068207.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240107888|gb|EER26062.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320037953|gb|EFW19889.1| ribosome biogenesis protein Nop4 [Coccidioides posadasii str.
Silveira]
Length = 751
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S T E L + FSQ + AT + D + KGYG+VTF+ E+AQ+AL ++NG + DGR
Sbjct: 56 SATTESLTEYFSQSYPIKHATAVADPQTKQCKGYGFVTFADVEDAQRALGELNGSVFDGR 115
Query: 64 VIFVDNVRPSRRYNTDAPLARQLPQS 89
+ ++ P R D + + +P +
Sbjct: 116 KLKIEVAEP-RHREIDEKIGKSVPSA 140
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E LA F +G+V A +I KG +R G+G+V ++ A+KAL +NGK +DGR + V
Sbjct: 174 EQLAVLFRSYGKVKHA-VIPKKG-SRHAGFGFVVMRGKKNAEKALEGVNGKEVDGRTLAV 231
Query: 68 D 68
D
Sbjct: 232 D 232
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 3 FSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKAL 52
FS T E L + F++FG V A I++D +R +G G+V F E+EA+ +
Sbjct: 337 FSATDETLYEHFTRFGAVRYARIVVDPETDRPRGTGFVCFWKEDEAKACI 386
>gi|426241404|ref|XP_004014581.1| PREDICTED: RNA-binding protein 39 isoform 2 [Ovis aries]
Length = 524
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 257 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 316
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 317 TGRPMKVGHV 326
>gi|119188303|ref|XP_001244758.1| hypothetical protein CIMG_04199 [Coccidioides immitis RS]
gi|392871470|gb|EAS33387.2| ribosome biogenesis protein [Coccidioides immitis RS]
Length = 751
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S T E L + FSQ + AT + D + KGYG+VTF+ E+AQ+AL ++NG + DGR
Sbjct: 56 SATTESLTEYFSQSYPIKHATAVADPQTKQCKGYGFVTFADVEDAQRALGELNGSVFDGR 115
Query: 64 VIFVDNVRPSRRYNTDAPLARQLP 87
+ ++ P R D + + +P
Sbjct: 116 KLKIEVAEP-RHREIDEKIGKSVP 138
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E LA F +G+V A +I KG +R G+G+V ++ A+KAL +NGK +DGR + V
Sbjct: 174 EQLAVLFRSYGKVKHA-VIPKKG-SRHAGFGFVVMRGKKNAEKALEGVNGKEVDGRTLAV 231
Query: 68 D 68
D
Sbjct: 232 D 232
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 3 FSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKAL 52
FS T E L + F++FG V A I++D +R +G G+V F E+EA+ +
Sbjct: 337 FSATDETLYEHFTRFGAVRYARIVVDPETDRPRGTGFVCFWKEDEAKACI 386
>gi|403281374|ref|XP_003932163.1| PREDICTED: RNA-binding protein 39 [Saimiri boliviensis boliviensis]
Length = 502
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 257 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 316
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 317 AGRPMKVGHV 326
>gi|335279916|ref|XP_003353461.1| PREDICTED: putative RNA-binding protein 3-like [Sus scrofa]
Length = 156
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++F++ K+ L D S F ++E I+ D+ RS+G+G++TF+ E A + MNG+ L
Sbjct: 13 LNFNSDKQALEDHISSFRPISEVVIVKDRETQRSRGFGFITFTNPEHASNVMRAMNGESL 72
Query: 61 DGRVIFVDNVRPS 73
DGR I VD+ S
Sbjct: 73 DGRQIHVDHAGKS 85
>gi|432858814|ref|XP_004068952.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Oryzias latipes]
Length = 502
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 232 LHFNITEDMLRGIFEPFGRIENIQLMMDSETGRSKGYGFITFSDAECAKKALEQLNGFEL 291
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 292 AGRPMKVGHV 301
>gi|13540314|gb|AAK29408.1|AF338225_1 embryonic poly(A) binding protein [Xenopus laevis]
Length = 629
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFVDN 69
L + FS FG ++MD RS+G+G+V + EEAQKA+++MNGK ++GR+I+V
Sbjct: 207 LREIFSAFGNTLSVKVMMDDS-GRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVG- 264
Query: 70 VRPSRRYNTDAPLARQLPQSPEE 92
R +R + L R+ Q +E
Sbjct: 265 -RAQKRIERQSELKRKFEQIKQE 286
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S + L D FS FG + ++ D+ + S+GYG+V F T E A +A+ MNG LL+ R
Sbjct: 109 SIDNKALYDTFSAFGNILSCKVVCDE--HGSRGYGFVHFETHEAANRAIQTMNGMLLNDR 166
Query: 64 VIFVDNVRPSRR 75
+FV + + SRR
Sbjct: 167 KVFVGHFK-SRR 177
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
L F +G +T A ++ + G SKG+G+V FS+ EEA KA+ +MNG+++ + ++V
Sbjct: 310 LRKEFLPYGTITSAKVMTEGG--HSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYV 365
>gi|374584597|ref|ZP_09657689.1| RNP-1 like RNA-binding protein [Leptonema illini DSM 21528]
gi|373873458|gb|EHQ05452.1| RNP-1 like RNA-binding protein [Leptonema illini DSM 21528]
Length = 109
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ TT L +F G V EA ++MD+ +S+G+G+VTF+ E A+ A++ MNG L
Sbjct: 10 LSWDTTDTTLRHSFEAHGSVHEAIVVMDRYTGKSRGFGFVTFADENSARTAISAMNGTDL 69
Query: 61 DGRVIFVDNVRPSRR 75
DGR I V + R
Sbjct: 70 DGRSITVSEAQERSR 84
>gi|195050249|ref|XP_001992854.1| GH13506 [Drosophila grimshawi]
gi|193899913|gb|EDV98779.1| GH13506 [Drosophila grimshawi]
Length = 628
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ +IMD RSKGYG++T+ ++A+KAL +NG L
Sbjct: 376 LHFNITEDMLRGIFEPFGKIDVIQLIMDNETGRSKGYGFITYHNADDAKKALEQLNGFEL 435
Query: 61 DGRVIFVDNV 70
GR + V NV
Sbjct: 436 AGRPMKVGNV 445
>gi|307195359|gb|EFN77277.1| RNA-binding protein 39 [Harpegnathos saltator]
Length = 370
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ +IMD RSKGYG++TF ++A+KAL +NG L
Sbjct: 116 LHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNADDAKKALEQLNGFEL 175
Query: 61 DGRVIFVDNV 70
GR + V NV
Sbjct: 176 AGRPMKVGNV 185
>gi|426241402|ref|XP_004014580.1| PREDICTED: RNA-binding protein 39 isoform 1 [Ovis aries]
Length = 530
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 257 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 316
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 317 TGRPMKVGHV 326
>gi|363807832|ref|NP_001242695.1| uncharacterized protein LOC100811977 [Glycine max]
gi|255644898|gb|ACU22949.1| unknown [Glycine max]
Length = 287
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ T E + F QFG + EA II DK +SKGYG+VTF +E A++A AD N ++
Sbjct: 45 LAWETPTEEMRKYFEQFGNILEAVIITDKSTGKSKGYGFVTFCDQESARRACADPN-PII 103
Query: 61 DGR 63
DGR
Sbjct: 104 DGR 106
>gi|168037600|ref|XP_001771291.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677380|gb|EDQ63851.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 87
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 46/68 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++TT + L AF FG V ++ +I D+ RS+G+G++TF+ E +A+ +MNGK L
Sbjct: 9 LAWATTDDRLEQAFRPFGDVIQSKVISDRETGRSRGFGFITFADENAMNEAIKEMNGKEL 68
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 69 DGRNITVN 76
>gi|432858816|ref|XP_004068953.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Oryzias latipes]
Length = 529
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 259 LHFNITEDMLRGIFEPFGRIENIQLMMDSETGRSKGYGFITFSDAECAKKALEQLNGFEL 318
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 319 AGRPMKVGHV 328
>gi|426241410|ref|XP_004014584.1| PREDICTED: RNA-binding protein 39 isoform 5 [Ovis aries]
Length = 530
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 263 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 322
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 323 TGRPMKVGHV 332
>gi|148227542|ref|NP_001082094.1| embryonic polyadenylate-binding protein A [Xenopus laevis]
gi|94711253|sp|Q98SP8.2|EPABA_XENLA RecName: Full=Embryonic polyadenylate-binding protein A;
Short=Embryonic poly(A)-binding protein A; Short=ePAB-A;
Short=ePABP-A; AltName: Full=XePABP-A
gi|51258324|gb|AAH80020.1| EPAB protein [Xenopus laevis]
Length = 629
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFVDN 69
L + FS FG ++MD RS+G+G+V + EEAQKA+++MNGK ++GR+I+V
Sbjct: 207 LREIFSAFGNTLSVKVMMDDS-GRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVG- 264
Query: 70 VRPSRRYNTDAPLARQLPQSPEE 92
R +R + L R+ Q +E
Sbjct: 265 -RAQKRIERQSELKRKFEQIKQE 286
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S + L D FS FG + ++ D+ + S+GYG+V F T E A +A+ MNG LL+ R
Sbjct: 109 SIDNKALYDTFSAFGNILSCKVVCDE--HGSRGYGFVHFETHEAANRAIQTMNGMLLNDR 166
Query: 64 VIFVDNVRPSRR 75
+FV + + SRR
Sbjct: 167 KVFVGHFK-SRR 177
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
L F +G +T A ++ + G SKG+G+V FS+ EEA KA+ +MNG+++ + ++V
Sbjct: 310 LRKEFLPYGTITSAKVMTEGG--HSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYV 365
>gi|417411155|gb|JAA52027.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Desmodus rotundus]
Length = 491
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 224 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 283
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 284 AGRPMKVGHV 293
>gi|259146662|emb|CAY79919.1| Nsr1p [Saccharomyces cerevisiae EC1118]
Length = 414
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+S E L F G V A +I ++G +RS+GYGYV F + A+KA+ +M GK +
Sbjct: 175 LSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQEMQGKEI 234
Query: 61 DGRVIFVD 68
DGR I D
Sbjct: 235 DGRPINCD 242
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF+ ++ + + F++ G+V I + KG+GYV FS E+A+KAL + G+ +
Sbjct: 274 LSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYI 333
Query: 61 DGRVIFVDNVRPSRRYNTD 79
D R + +D P R N D
Sbjct: 334 DNRPVRLDFSSP--RPNND 350
>gi|190406825|gb|EDV10092.1| nuclear localization sequence binding protein [Saccharomyces
cerevisiae RM11-1a]
gi|207345058|gb|EDZ72003.1| YGR159Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272028|gb|EEU07041.1| Nsr1p [Saccharomyces cerevisiae JAY291]
gi|323354844|gb|EGA86677.1| Nsr1p [Saccharomyces cerevisiae VL3]
gi|365765431|gb|EHN06939.1| Nsr1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 416
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+S E L F G V A +I ++G +RS+GYGYV F + A+KA+ +M GK +
Sbjct: 177 LSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQEMQGKEI 236
Query: 61 DGRVIFVD 68
DGR I D
Sbjct: 237 DGRPINCD 244
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF+ ++ + + F++ G+V I + KG+GYV FS E+A+KAL + G+ +
Sbjct: 276 LSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYI 335
Query: 61 DGRVIFVDNVRPSRRYNTD 79
D R + +D P R N D
Sbjct: 336 DNRPVRLDFSSP--RPNND 352
>gi|151943436|gb|EDN61747.1| nuclear localization sequence binding protein [Saccharomyces
cerevisiae YJM789]
Length = 418
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+S E L F G V A +I ++G +RS+GYGYV F + A+KA+ +M GK +
Sbjct: 179 LSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQEMQGKEI 238
Query: 61 DGRVIFVD 68
DGR I D
Sbjct: 239 DGRPINCD 246
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF+ ++ + + F++ G+V I + KG+GYV FS E+A+KAL + G+ +
Sbjct: 278 LSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYI 337
Query: 61 DGRVIFVDNVRPSRRYNTD 79
D R + +D P R N D
Sbjct: 338 DNRPVRLDFSSP--RPNND 354
>gi|403341233|gb|EJY69916.1| RNA binding domain-containing protein 28 [Oxytricha trifallax]
Length = 732
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F + L F +FG + + + N ++G+G++ FST+EEAQKA+ MNG+
Sbjct: 37 IQFDLKEPHLKKEFQKFGTIVAVNVPIKNENNLNRGFGFIEFSTKEEAQKAIDGMNGQKY 96
Query: 61 DGRVIFVDNVRPSRRYNT 78
GRV+ V+ PSR+Y +
Sbjct: 97 KGRVLAVEYSTPSRKYES 114
>gi|378726298|gb|EHY52757.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 481
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 40/61 (65%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E+L AFS FG V+EA ++ D RS+GYG+V F +A+KALA M+G+ L R I V
Sbjct: 189 EVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALASMDGEWLGSRAIRV 248
Query: 68 D 68
+
Sbjct: 249 N 249
>gi|255726450|ref|XP_002548151.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240134075|gb|EER33630.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 472
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 41/58 (70%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVI 65
E L +AFS+FG + +A ++ D +RS+GYG+VTFS + +A+ AL MNG+ L GR I
Sbjct: 189 EGLRNAFSKFGSLKQAHVMWDMQTSRSRGYGFVTFSEQADAELALQTMNGEWLGGRAI 246
>gi|441613453|ref|XP_004088139.1| PREDICTED: polyadenylate-binding protein 1-like [Nomascus
leucogenys]
Length = 638
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L AFS FG +T A ++M+ G RSKG+G+V FS+ EEA KA+ +MNG+++ + ++V
Sbjct: 308 ERLRKAFSPFGTITSAKVMMEGG--RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L D F +FG ++ D+ +SKG+G+V+F E+AQKA+ +MNGK L+G+ I+V
Sbjct: 205 ERLKDLFGKFGPTLSVKVMTDQS-GKSKGFGFVSFEKHEDAQKAVDEMNGKELNGKQIYV 263
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S + L D S FG V ++ D+ N SKGYG+V F T E A++A+ MNG L+ R
Sbjct: 109 SINNKALYDTVSAFGNVLSCKVVCDE--NGSKGYGFVHFETREAAERAIEKMNGIPLNDR 166
Query: 64 VIFV 67
+FV
Sbjct: 167 KVFV 170
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
T+ ML + FS+ G + + D S Y YV F ++A+ AL MN ++ G+
Sbjct: 22 VTEAMLYEKFSRAGPILSIRVCRDVITPHSSNYAYVNFQHPKDAEHALDTMNFDVIKGKP 81
Query: 65 IFV 67
+ +
Sbjct: 82 LRI 84
>gi|7024451|dbj|BAA92156.1| glycine-rich RNA-binding protein [Citrus unshiu]
Length = 167
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 46/68 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++TT L +AFS +G + E+ II D+ RS+G+G+VTF E+ + A+ MNG+ L
Sbjct: 15 LAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNL 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRNITVN 82
>gi|395505312|ref|XP_003756986.1| PREDICTED: RNA-binding protein 39 [Sarcophilus harrisii]
Length = 557
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 290 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 349
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 350 AGRPMKVGHV 359
>gi|349578366|dbj|GAA23532.1| K7_Nsr1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 416
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+S E L F G V A +I ++G +RS+GYGYV F + A+KA+ +M GK +
Sbjct: 177 LSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQEMQGKEI 236
Query: 61 DGRVIFVD 68
DGR I D
Sbjct: 237 DGRPINCD 244
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF+ ++ + + F++ G+V I + KG+GYV FS E+A+KAL + G+ +
Sbjct: 276 LSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYI 335
Query: 61 DGRVIFVDNVRPSRRYNTD 79
D R + +D P R N D
Sbjct: 336 DNRPVRLDFSSP--RPNND 352
>gi|297274127|ref|XP_002800732.1| PREDICTED: polyadenylate-binding protein 1 [Macaca mulatta]
Length = 605
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L AFS FG +T A ++M+ G RSKG+G+V FS+ EEA KA+ +MNG+++ + ++V
Sbjct: 276 ERLRKAFSPFGTITSAKVMMEGG--RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 333
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L D F +FG ++ D+ +SKG+G+V+F E+AQKA+ +MNGK L+G+ I+V
Sbjct: 173 ERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKHIYV 231
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 27/37 (72%)
Query: 31 KNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
+N SKGYG+V F T E A++A+ MNG LL+ R +FV
Sbjct: 102 ENGSKGYGFVHFETHEAAERAIEKMNGTLLNDRKVFV 138
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
T+ ML + FS+ G + + D RS Y YV F ++A++AL MN ++ G+
Sbjct: 22 VTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQHPKDAERALDTMNFDVIKGKP 81
Query: 65 IFV 67
+ +
Sbjct: 82 VRI 84
>gi|293335932|ref|NP_001168160.1| uncharacterized protein LOC100381912 [Zea mays]
gi|223946377|gb|ACN27272.1| unknown [Zea mays]
gi|414872130|tpg|DAA50687.1| TPA: hypothetical protein ZEAMMB73_997132 [Zea mays]
Length = 297
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T + L DAF +FG+V +A I++++ NR +G+G+VTF A+ +M+G+ +
Sbjct: 14 LSWQTDERKLEDAFGRFGKVVDAQIMVERHTNRHRGFGFVTFEDRRAVDSAIKEMHGQEI 73
Query: 61 DGRVIFVDNVRPSRRYNTD 79
DGR I V+ P + NTD
Sbjct: 74 DGRTISVNKAEP--KMNTD 90
>gi|6321599|ref|NP_011675.1| Nsr1p [Saccharomyces cerevisiae S288c]
gi|128576|sp|P27476.1|NSR1_YEAST RecName: Full=Nuclear localization sequence-binding protein;
AltName: Full=p67
gi|4058|emb|CAA40472.1| nuclear localization sequence binding protein [Saccharomyces
cerevisiae]
gi|1045265|emb|CAA59817.1| NSR1 [Saccharomyces cerevisiae]
gi|1323271|emb|CAA97173.1| NSR1 [Saccharomyces cerevisiae]
gi|285812350|tpg|DAA08250.1| TPA: Nsr1p [Saccharomyces cerevisiae S288c]
gi|392299413|gb|EIW10507.1| Nsr1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 414
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+S E L F G V A +I ++G +RS+GYGYV F + A+KA+ +M GK +
Sbjct: 175 LSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQEMQGKEI 234
Query: 61 DGRVIFVD 68
DGR I D
Sbjct: 235 DGRPINCD 242
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF+ ++ + + F++ G+V I + KG+GYV FS E+A+KAL + G+ +
Sbjct: 274 LSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYI 333
Query: 61 DGRVIFVDNVRPSRRYNTD 79
D R + +D P R N D
Sbjct: 334 DNRPVRLDFSSP--RPNND 350
>gi|425765484|gb|EKV04163.1| hypothetical protein PDIP_88470 [Penicillium digitatum Pd1]
gi|425778342|gb|EKV16473.1| hypothetical protein PDIG_20660 [Penicillium digitatum PHI26]
Length = 136
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 44/68 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++T L F +FG V +AT++ D+ RS+G+G+V FST+EEA A+ MN +
Sbjct: 9 LSWNTDDNSLRQRFEEFGVVEDATVVKDRDTGRSRGFGFVRFSTDEEATAAMNAMNNQEF 68
Query: 61 DGRVIFVD 68
DGR I VD
Sbjct: 69 DGRQIRVD 76
>gi|209735756|gb|ACI68747.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 81
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 47/67 (70%), Gaps = 2/67 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF TT+E LA+AF+++G + + +I DK RS+G+G+V + E+A+ AL MNGK +
Sbjct: 12 LSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDALEGMNGKSV 71
Query: 61 DGRVIFV 67
D +IFV
Sbjct: 72 D--LIFV 76
>gi|414878515|tpg|DAA55646.1| TPA: hypothetical protein ZEAMMB73_431003 [Zea mays]
Length = 113
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 42/67 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T + L D FSQ G V A +I +SKG+G+V FS++ +A AL MNG++L
Sbjct: 40 LSYDTNETALKDVFSQCGDVIAAKVICHPTSGKSKGFGFVKFSSQNQADAALQKMNGQVL 99
Query: 61 DGRVIFV 67
DGR I V
Sbjct: 100 DGRKIRV 106
>gi|426374960|ref|XP_004054321.1| PREDICTED: polyadenylate-binding protein 3 [Gorilla gorilla
gorilla]
Length = 631
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L AFS FG +T A ++M+ G RSKG+G+V FS+ EEA KA+ +MNG+++ + ++V
Sbjct: 308 ERLWKAFSPFGTITSAKVMMEGG--RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S + L D S FG + ++ D+ N SKGYG+V F T E A++A+ MNG LL+ R
Sbjct: 109 SINNKALYDTVSAFGNILSCKVVCDE--NGSKGYGFVHFETHEAAERAIEKMNGMLLNDR 166
Query: 64 VIFV 67
+FV
Sbjct: 167 KVFV 170
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L D F +FG ++ D+ +SKG+G+V+F E+AQKA+ +MNGK L+G+ I+V
Sbjct: 205 ERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
>gi|297846324|ref|XP_002891043.1| RNA recognition motif-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336885|gb|EFH67302.1| RNA recognition motif-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 246
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ T K L + F QFG + EA +I DK RSKGYG+VTF E AQKA D ++
Sbjct: 14 LAWETHKISLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQKACVD-PAPVI 72
Query: 61 DGR 63
DGR
Sbjct: 73 DGR 75
>gi|417411216|gb|JAA52053.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Desmodus rotundus]
Length = 499
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 226 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 285
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 286 AGRPMKVGHV 295
>gi|384246748|gb|EIE20237.1| hypothetical protein COCSUDRAFT_57959 [Coccomyxa subellipsoidea
C-169]
Length = 303
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 1 VSFSTTKEMLADAFSQFGQVT-EATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKL 59
+S+ TT + LAD FS++ Q +A +++D+ NRS+G+G+VTF T+E+ ++ +A ++
Sbjct: 27 ISWHTTDQELADTFSKYAQAPVDARVMLDRITNRSRGFGFVTFDTKEDMEECIAKLHATE 86
Query: 60 LDGRVIFV 67
LDGR I V
Sbjct: 87 LDGRKISV 94
>gi|298528813|ref|ZP_07016217.1| RNP-1 like RNA-binding protein [Desulfonatronospira thiodismutans
ASO3-1]
gi|298512465|gb|EFI36367.1| RNP-1 like RNA-binding protein [Desulfonatronospira thiodismutans
ASO3-1]
Length = 84
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++TT+ L D+F++FG+V+ A II D+ RS+G+G+V E A +A+ +NGK
Sbjct: 9 LSWNTTETQLRDSFAEFGEVSSAKIIEDRETGRSRGFGFV--EMENGADEAVEKLNGKDF 66
Query: 61 DGRVIFVDNVRPSR 74
DGR I V+ +P R
Sbjct: 67 DGRTIKVNVAKPKR 80
>gi|195116809|ref|XP_002002944.1| GI10246 [Drosophila mojavensis]
gi|193913519|gb|EDW12386.1| GI10246 [Drosophila mojavensis]
Length = 617
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ +IMD RSKGYG++T+ ++A+KAL +NG L
Sbjct: 365 LHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNGFEL 424
Query: 61 DGRVIFVDNV 70
GR + V NV
Sbjct: 425 AGRPMKVGNV 434
>gi|148674239|gb|EDL06186.1| RNA binding motif protein 39, isoform CRA_d [Mus musculus]
Length = 507
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 240 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 299
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 300 AGRPMKVGHV 309
>gi|254585491|ref|XP_002498313.1| ZYRO0G07326p [Zygosaccharomyces rouxii]
gi|238941207|emb|CAR29380.1| ZYRO0G07326p [Zygosaccharomyces rouxii]
Length = 468
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++ + L + F G V A +I ++G RS+GYGYV F+ + A+KA+ +M+GK L
Sbjct: 243 LSWNIDDQWLKNEFEHIGGVQSARVIYERGSTRSRGYGYVDFTDKSYAEKAVKEMHGKEL 302
Query: 61 DGRVIFVD 68
DGR I D
Sbjct: 303 DGRPINCD 310
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF+ ++ + + FS G+V I + KG+GYV +++ + AQKAL + G+ +
Sbjct: 344 LSFNADRDQIYELFSPHGEVISVRIPTHPETEQPKGFGYVQYASVDSAQKALETLQGEYI 403
Query: 61 DGRVIFVDNVRP 72
D R + +D P
Sbjct: 404 DNRPVRLDFSTP 415
>gi|2366750|dbj|BAA22083.1| RNA binding protein [Nicotiana sylvestris]
gi|295393569|gb|ADG03640.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
gi|399931789|gb|AFP57444.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
gi|399931793|gb|AFP57446.1| RNA-binding glycine-rich protein [Nicotiana acuminata]
gi|399931795|gb|AFP57447.1| RNA-binding glycine-rich protein [Nicotiana alata]
gi|399931809|gb|AFP57454.1| RNA-binding glycine-rich protein [Nicotiana sylvestris]
Length = 144
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 45/67 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T + L DAF+ FG V +A +I+D+ RS+G+G+V FS +E A +A+ M+G+ L
Sbjct: 45 LSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDECANEAIKAMDGQEL 104
Query: 61 DGRVIFV 67
GR I V
Sbjct: 105 QGRNIRV 111
>gi|59858555|ref|NP_001012304.1| RNA-binding protein 39 [Danio rerio]
gi|27882534|gb|AAH44487.1| RNA binding motif protein 39a [Danio rerio]
gi|182892014|gb|AAI65689.1| Rbm39a protein [Danio rerio]
Length = 523
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 253 LHFNITEDMLRGIFEPFGRIDSIQLMMDSETGRSKGYGFITFSDAECAKKALEQLNGFEL 312
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 313 AGRPMKVGHV 322
>gi|410953912|ref|XP_003983612.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39 [Felis
catus]
Length = 523
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 256 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 315
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 316 AGRPMKVGHV 325
>gi|336386026|gb|EGO27172.1| hypothetical protein SERLADRAFT_434943 [Serpula lacrymans var.
lacrymans S7.9]
Length = 284
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 46/68 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S T + L + FS+FG+V + TI+ D+ +RS+G+G++ ST EEA + + ++NG L
Sbjct: 90 LSIRTQERDLDEEFSRFGRVEKVTIVYDQRSDRSRGFGFIKMSTVEEATRCIQELNGVDL 149
Query: 61 DGRVIFVD 68
+GR I VD
Sbjct: 150 NGRRIRVD 157
>gi|253181|gb|AAB22809.1| NSR1=nucleolin homolog [Saccharomyces cerevisiae, Peptide, 249
aa]
Length = 249
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+S E L F G V A +I ++G +RS+GYGYV F + A+KA+ +M GK +
Sbjct: 10 LSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQEMQGKEI 69
Query: 61 DGRVIFVD 68
DGR I D
Sbjct: 70 DGRPINCD 77
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF+ ++ + + F++ G+V I + KG+GYV FS E+A+KAL + G+ +
Sbjct: 109 LSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYI 168
Query: 61 DGRVIFVDNVRPSRRYNTD 79
D R + +D P R N D
Sbjct: 169 DNRPVRLDFSSP--RPNND 185
>gi|74179655|dbj|BAE22477.1| unnamed protein product [Mus musculus]
Length = 521
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 254 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 313
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 314 AGRPMKVGHV 323
>gi|35493811|ref|NP_909122.1| RNA-binding protein 39 isoform a [Homo sapiens]
gi|281182530|ref|NP_001162566.1| RNA-binding protein 39 [Papio anubis]
gi|284004921|ref|NP_001164806.1| RNA-binding protein 39 [Oryctolagus cuniculus]
gi|149733225|ref|XP_001501869.1| PREDICTED: RNA-binding protein 39 isoform 1 [Equus caballus]
gi|296199703|ref|XP_002747279.1| PREDICTED: RNA-binding protein 39 isoform 2 [Callithrix jacchus]
gi|332858224|ref|XP_003316931.1| PREDICTED: uncharacterized protein LOC458443 isoform 1 [Pan
troglodytes]
gi|335304742|ref|XP_003360012.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|344279919|ref|XP_003411733.1| PREDICTED: RNA-binding protein 39 isoform 1 [Loxodonta africana]
gi|345789986|ref|XP_864959.2| PREDICTED: RNA-binding protein 39 isoform 3 [Canis lupus
familiaris]
gi|354477982|ref|XP_003501196.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Cricetulus
griseus]
gi|397523808|ref|XP_003831910.1| PREDICTED: RNA-binding protein 39 [Pan paniscus]
gi|426391507|ref|XP_004062114.1| PREDICTED: RNA-binding protein 39 isoform 1 [Gorilla gorilla
gorilla]
gi|28201880|sp|Q14498.2|RBM39_HUMAN RecName: Full=RNA-binding protein 39; AltName: Full=Hepatocellular
carcinoma protein 1; AltName: Full=RNA-binding motif
protein 39; AltName: Full=RNA-binding region-containing
protein 2; AltName: Full=Splicing factor HCC1
gi|405194|gb|AAA16347.1| splicing factor [Homo sapiens]
gi|119596565|gb|EAW76159.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_a [Homo
sapiens]
gi|119596567|gb|EAW76161.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_a [Homo
sapiens]
gi|146327034|gb|AAI41836.1| RNA binding motif protein 39 [Homo sapiens]
gi|164623752|gb|ABY64678.1| RNA binding motif protein 39, isoform 1 (predicted) [Papio anubis]
gi|165971473|gb|AAI58173.1| RNA binding motif protein 39 [Homo sapiens]
gi|166831598|gb|ABY90123.1| RNA binding motif protein 39 isoform a (predicted) [Callithrix
jacchus]
gi|169731519|gb|ACA64891.1| RNA binding motif protein 39 isoform a (predicted) [Callicebus
moloch]
gi|197215647|gb|ACH53039.1| RNA binding motif protein 39 isoform a (predicted) [Otolemur
garnettii]
gi|217038339|gb|ACJ76632.1| RNA binding motif protein 39 isoform a (predicted) [Oryctolagus
cuniculus]
gi|229368730|gb|ACQ63013.1| RNA binding motif protein 39 isoform a (predicted) [Dasypus
novemcinctus]
gi|351702535|gb|EHB05454.1| RNA-binding protein 39 [Heterocephalus glaber]
gi|380783277|gb|AFE63514.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|383408125|gb|AFH27276.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|384939254|gb|AFI33232.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|410218746|gb|JAA06592.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410255434|gb|JAA15684.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292900|gb|JAA25050.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292904|gb|JAA25052.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350859|gb|JAA42033.1| RNA binding motif protein 39 [Pan troglodytes]
gi|440902514|gb|ELR53299.1| RNA-binding protein 39 [Bos grunniens mutus]
Length = 530
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 257 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 316
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 317 AGRPMKVGHV 326
>gi|355784531|gb|EHH65382.1| RNA-binding motif protein 39 [Macaca fascicularis]
Length = 530
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 257 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 316
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 317 AGRPMKVGHV 326
>gi|167386187|ref|XP_001737654.1| splicing factor, arginine/serine-rich [Entamoeba dispar SAW760]
gi|165899464|gb|EDR26052.1| splicing factor, arginine/serine-rich, putative [Entamoeba dispar
SAW760]
Length = 199
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S ST K+ L +AF G++ + + K SKG+G+VTF+ EE A+KA+ +MNGK +
Sbjct: 11 LSLSTDKDKLKEAFVSVGEIKNSRVATHK-DGASKGFGFVTFNDEETAEKAVNEMNGKEI 69
Query: 61 DGRVIFVDNVRPSRRYNTD 79
DG ++ V RP R D
Sbjct: 70 DGSIVVVQISRPQDRKRRD 88
>gi|52545994|emb|CAH18281.2| hypothetical protein [Homo sapiens]
Length = 513
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 240 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 299
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 300 AGRPMKVGHV 309
>gi|4757926|ref|NP_004893.1| RNA-binding protein 39 isoform b [Homo sapiens]
gi|197097940|ref|NP_001125339.1| RNA-binding protein 39 [Pongo abelii]
gi|149733223|ref|XP_001501876.1| PREDICTED: RNA-binding protein 39 isoform 2 [Equus caballus]
gi|194044529|ref|XP_001925282.1| PREDICTED: RNA-binding protein 39 isoform 2 [Sus scrofa]
gi|296199701|ref|XP_002747278.1| PREDICTED: RNA-binding protein 39 isoform 1 [Callithrix jacchus]
gi|301762104|ref|XP_002916459.1| PREDICTED: RNA-binding protein 39-like [Ailuropoda melanoleuca]
gi|332858226|ref|XP_514808.3| PREDICTED: uncharacterized protein LOC458443 isoform 5 [Pan
troglodytes]
gi|344279921|ref|XP_003411734.1| PREDICTED: RNA-binding protein 39 isoform 2 [Loxodonta africana]
gi|345789988|ref|XP_865124.2| PREDICTED: RNA-binding protein 39 isoform 12 [Canis lupus
familiaris]
gi|354477984|ref|XP_003501197.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Cricetulus
griseus]
gi|426391509|ref|XP_004062115.1| PREDICTED: RNA-binding protein 39 isoform 2 [Gorilla gorilla
gorilla]
gi|75070825|sp|Q5RC80.1|RBM39_PONAB RecName: Full=RNA-binding protein 39; AltName: Full=RNA-binding
motif protein 39
gi|405192|gb|AAA16346.1| splicing factor [Homo sapiens]
gi|55727753|emb|CAH90627.1| hypothetical protein [Pongo abelii]
gi|119596568|gb|EAW76162.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_c [Homo
sapiens]
gi|119596569|gb|EAW76163.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_c [Homo
sapiens]
gi|296480931|tpg|DAA23046.1| TPA: RNA binding motif protein 39 [Bos taurus]
gi|307686241|dbj|BAJ21051.1| RNA binding motif protein 39 [synthetic construct]
gi|344246681|gb|EGW02785.1| RNA-binding protein 39 [Cricetulus griseus]
gi|380783275|gb|AFE63513.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|383408127|gb|AFH27277.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|384939256|gb|AFI33233.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|410218748|gb|JAA06593.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410255438|gb|JAA15686.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292902|gb|JAA25051.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350855|gb|JAA42031.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350863|gb|JAA42035.1| RNA binding motif protein 39 [Pan troglodytes]
Length = 524
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 257 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 316
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 317 AGRPMKVGHV 326
>gi|406994267|gb|EKE13283.1| hypothetical protein ACD_13C00045G0007 [uncultured bacterium]
Length = 134
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 44/72 (61%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ FSTT++ L FS+ G V AT+IMDK +SKG+G+V T EEA KA++ +N
Sbjct: 10 LPFSTTQDELKTLFSESGTVVSATVIMDKMTGQSKGFGFVEMETTEEAAKAISSLNETEF 69
Query: 61 DGRVIFVDNVRP 72
GR + V +P
Sbjct: 70 GGRTLIVAEAKP 81
>gi|406959178|gb|EKD86596.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 81
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 43/63 (68%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFVDN 69
LA+ F+Q G V A ++ D+ RS+G+G+V ST+EEAQ A+ ++NG ++GR I V+
Sbjct: 15 LAELFAQAGNVVSAQVVKDRETGRSRGFGFVEMSTDEEAQNAVKNLNGTDVEGRKIVVNI 74
Query: 70 VRP 72
RP
Sbjct: 75 ARP 77
>gi|330688445|ref|NP_001193433.1| RNA-binding protein 39 [Bos taurus]
Length = 530
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 263 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 322
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 323 AGRPMKVGHV 332
>gi|281346065|gb|EFB21649.1| hypothetical protein PANDA_004543 [Ailuropoda melanoleuca]
Length = 497
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 224 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 283
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 284 AGRPMKVGHV 293
>gi|118403314|ref|NP_573505.2| RNA-binding protein 39 [Mus musculus]
gi|392346872|ref|XP_003749653.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Rattus
norvegicus]
gi|341941811|sp|Q8VH51.2|RBM39_MOUSE RecName: Full=RNA-binding protein 39; AltName: Full=Coactivator of
activating protein 1 and estrogen receptors;
Short=Coactivator of AP-1 and ERs; AltName:
Full=RNA-binding motif protein 39; AltName:
Full=RNA-binding region-containing protein 2; AltName:
Full=Transcription coactivator CAPER
gi|55991480|gb|AAH86645.1| RNA binding motif protein 39 [Mus musculus]
gi|74151058|dbj|BAE27657.1| unnamed protein product [Mus musculus]
gi|148674237|gb|EDL06184.1| RNA binding motif protein 39, isoform CRA_b [Mus musculus]
Length = 530
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 257 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 316
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 317 AGRPMKVGHV 326
>gi|426241406|ref|XP_004014582.1| PREDICTED: RNA-binding protein 39 isoform 3 [Ovis aries]
Length = 502
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 235 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 294
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 295 TGRPMKVGHV 304
>gi|296199709|ref|XP_002747282.1| PREDICTED: RNA-binding protein 39 isoform 5 [Callithrix jacchus]
Length = 504
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 231 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 290
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 291 AGRPMKVGHV 300
>gi|194386036|dbj|BAG59582.1| unnamed protein product [Homo sapiens]
Length = 503
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 230 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 289
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 290 AGRPMKVGHV 299
>gi|431894348|gb|ELK04148.1| RNA-binding protein 39 [Pteropus alecto]
Length = 601
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 334 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 393
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 394 AGRPMKVGHV 403
>gi|88682991|gb|AAI05542.1| RBM39 protein [Bos taurus]
Length = 528
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 261 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 320
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 321 AGRPMKVGHV 330
>gi|61557287|ref|NP_001013225.1| RNA-binding protein 39 [Rattus norvegicus]
gi|392346874|ref|XP_003749654.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Rattus
norvegicus]
gi|60552170|gb|AAH91394.1| RNA binding motif protein 39 [Rattus norvegicus]
gi|74196119|dbj|BAE32977.1| unnamed protein product [Mus musculus]
gi|149030834|gb|EDL85861.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_f [Rattus
norvegicus]
Length = 524
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 257 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 316
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 317 AGRPMKVGHV 326
>gi|402901594|ref|XP_003913731.1| PREDICTED: polyadenylate-binding protein 1-like [Papio anubis]
Length = 636
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L AFS FG +T A ++M+ G RSKG+G+V FS+ EEA KA+ +MNG+++ + ++V
Sbjct: 308 ERLRKAFSPFGTITSAKVMMEGG--RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S ++L D S FG + ++ D+ N SKGYG+V F T E A++A+ MNG LL+ R
Sbjct: 109 SINNKVLYDTVSAFGNILSCKVVCDE--NGSKGYGFVHFETHEAAERAIEKMNGTLLNDR 166
Query: 64 VIFV 67
+FV
Sbjct: 167 KVFV 170
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L D F +FG ++ D+ +SKG+G+V+F E+AQKA+ +MNGK L+G+ I+V
Sbjct: 205 ERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
T+ ML + FS+ G + + D RS Y YV F ++A+ AL MN ++ G+
Sbjct: 22 VTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQHPKDAEHALDTMNFDVIKGKP 81
Query: 65 IFV 67
+ +
Sbjct: 82 VRI 84
>gi|224099981|ref|XP_002311696.1| predicted protein [Populus trichocarpa]
gi|118486835|gb|ABK95252.1| unknown [Populus trichocarpa]
gi|222851516|gb|EEE89063.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 43/67 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+S T E L AF ++G V A ++ D +S+GYG+V +ST+EE + AL +NG L
Sbjct: 205 LSWSVTSESLTQAFQEYGNVVGARVLYDGETGKSRGYGFVCYSTKEELETALQSLNGVEL 264
Query: 61 DGRVIFV 67
+GR + V
Sbjct: 265 EGRALRV 271
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVI---F 66
LA ++G ++ + RS+G+ +VT S+ E+ + + +++G GR++ F
Sbjct: 123 LAGMIQEYGTPEMVEVLYHRETGRSRGFAFVTMSSIEDCETVIENLDGSQYMGRILRVNF 182
Query: 67 VDNVRP 72
D +P
Sbjct: 183 ADKPKP 188
>gi|226469234|emb|CAX70096.1| RNA-binding protein 39 [Schistosoma japonicum]
Length = 327
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ ++ T+EML F FG++ + +I D NRS+GYG+VT+ ++A+KAL +NG L
Sbjct: 74 LHYNITEEMLKGIFEPFGKIEDIKLIKDPATNRSQGYGFVTYVNSDDAKKALDQLNGFEL 133
Query: 61 DGRVIFVDNVRPSRRY 76
GR + V++V Y
Sbjct: 134 AGRPMKVNHVTERSEY 149
>gi|194384132|dbj|BAG64839.1| unnamed protein product [Homo sapiens]
Length = 521
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 248 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 307
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 308 AGRPMKVGHV 317
>gi|118100450|ref|XP_425690.2| PREDICTED: RNA-binding protein 39 [Gallus gallus]
gi|363741409|ref|XP_003642487.1| PREDICTED: RNA-binding protein 39-like [Gallus gallus]
Length = 522
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 257 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 316
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 317 AGRPMKVGHV 326
>gi|62857615|ref|NP_001016788.1| RNA binding motif protein 39 [Xenopus (Silurana) tropicalis]
gi|62201342|gb|AAH93451.1| RNA binding motif protein 39 [Xenopus (Silurana) tropicalis]
gi|89273890|emb|CAJ83908.1| RNA-binding region (RNP1, RRM) containing 2 [Xenopus (Silurana)
tropicalis]
Length = 542
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 258 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 317
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 318 AGRPMKVGHV 327
>gi|224077247|ref|XP_002192236.1| PREDICTED: RNA-binding protein 39 [Taeniopygia guttata]
Length = 522
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 257 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 316
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 317 AGRPMKVGHV 326
>gi|119596572|gb|EAW76166.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_e [Homo
sapiens]
Length = 445
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 257 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 316
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 317 AGRPMKVGHV 326
>gi|17063213|gb|AAL32373.1| transcription coactivator CAPER [Mus musculus]
Length = 530
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 257 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 316
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 317 AGRPMKVGHV 326
>gi|426241408|ref|XP_004014583.1| PREDICTED: RNA-binding protein 39 isoform 4 [Ovis aries]
Length = 508
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 235 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 294
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 295 TGRPMKVGHV 304
>gi|82802753|gb|ABB92427.1| PABP3 [Gorilla gorilla]
Length = 630
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L AFS FG +T A ++M+ G RSKG+G+V FS+ EEA KA+ +MNG+++ + ++V
Sbjct: 308 ERLWKAFSPFGTITSAKVMMEGG--RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S + L D S FG + ++ D+ N SKGYG+V F T E A++A+ MNG LL+ R
Sbjct: 109 SINNKALYDTVSAFGNILSCKVVCDE--NGSKGYGFVHFETHEAAERAIEKMNGMLLNDR 166
Query: 64 VIFV 67
+FV
Sbjct: 167 KVFV 170
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L D F +FG ++ D+ +SKG+G+V+F E+AQKA+ +MNGK L+G+ I+V
Sbjct: 205 ERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
>gi|82802759|gb|ABB92430.1| PABP3 [Chlorocebus sabaeus]
Length = 635
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L AFS FG +T A ++M+ G RSKG+G+V FS+ EEA KA+ +MNG+++ + ++V
Sbjct: 308 ERLRKAFSPFGTITSAKVMMEGG--RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S ++L D S FG + ++ D+ N SKGYG+V F T E A++A+ MNG LL+ R
Sbjct: 109 SINNKVLYDTASAFGNILSCKVVCDE--NGSKGYGFVHFETHEAAERAIEKMNGMLLNDR 166
Query: 64 VIFV 67
+FV
Sbjct: 167 KVFV 170
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L D F +FG ++ D+ +SKG+G+V+F E+AQKA+ +MNGK L+G+ I+V
Sbjct: 205 ERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
T+ ML + FS+ G + + D R Y YV F ++A++AL MN ++ G+
Sbjct: 22 VTEAMLYEKFSRAGPILSIRVCRDVITRRYSSYAYVNFQHPKDAERALDTMNFDVIKGKP 81
Query: 65 IFV 67
+ +
Sbjct: 82 VRI 84
>gi|355754577|gb|EHH58478.1| hypothetical protein EGM_08341 [Macaca fascicularis]
Length = 637
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L AFS FG +T A ++M+ G RSKG+G+V FS+ EEA KA+ +MNG+++ + ++V
Sbjct: 308 ERLRKAFSPFGTITSAKVMMEGG--RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S ++L D S FG + ++ D+ N SKGYG+V F T E A++A+ MNG LL+ R
Sbjct: 109 SINNKVLYDTVSAFGNILSCKVVCDE--NGSKGYGFVHFETHEAAERAIEKMNGTLLNDR 166
Query: 64 VIFV 67
+FV
Sbjct: 167 KVFV 170
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L D F +FG ++ D+ +SKG+G+V+F E+A+KA+ +MNGK L+G+ I+V
Sbjct: 205 ERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDARKAVDEMNGKELNGKQIYV 263
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
T+ ML + FS+ G + + D RS Y YV F ++A++AL MN ++ G+
Sbjct: 22 VTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQHPKDAERALDTMNFDVIKGKP 81
Query: 65 IFV 67
+ +
Sbjct: 82 VRI 84
>gi|332249061|ref|XP_003273679.1| PREDICTED: RNA-binding protein 39 [Nomascus leucogenys]
Length = 432
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 165 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 224
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 225 AGRPMKVGHV 234
>gi|109120204|ref|XP_001091129.1| PREDICTED: polyadenylate-binding protein 1 isoform 2 [Macaca
mulatta]
Length = 637
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L AFS FG +T A ++M+ G RSKG+G+V FS+ EEA KA+ +MNG+++ + ++V
Sbjct: 308 ERLRKAFSPFGTITSAKVMMEGG--RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S ++L D S FG + ++ D+ N SKGYG+V F T E A++A+ MNG LL+ R
Sbjct: 109 SINNKVLYDTVSAFGNILSCKVVCDE--NGSKGYGFVHFETHEAAERAIEKMNGTLLNDR 166
Query: 64 VIFV 67
+FV
Sbjct: 167 KVFV 170
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L D F +FG ++ D+ +SKG+G+V+F E+AQKA+ +MNGK L+G+ I+V
Sbjct: 205 ERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKHIYV 263
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
T+ ML + FS+ G + + D RS Y YV F ++A++AL MN ++ G+
Sbjct: 22 VTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQHPKDAERALDTMNFDVIKGKP 81
Query: 65 IFV 67
+ +
Sbjct: 82 VRI 84
>gi|302926643|ref|XP_003054335.1| hypothetical protein NECHADRAFT_74951 [Nectria haematococca mpVI
77-13-4]
gi|256735276|gb|EEU48622.1| hypothetical protein NECHADRAFT_74951 [Nectria haematococca mpVI
77-13-4]
Length = 178
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 42/67 (62%)
Query: 2 SFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLD 61
S+ T + L F +FG V EA ++ D+ RS+G+G+V ++ E +AQKA+A MN D
Sbjct: 13 SWHTEEGTLRQKFEEFGPVEEAVVVKDRDTGRSRGFGFVRYTQEGDAQKAIATMNNVEFD 72
Query: 62 GRVIFVD 68
GR I VD
Sbjct: 73 GRTIRVD 79
>gi|190402270|gb|ACE77680.1| RNA binding motif protein 39 isoform a (predicted) [Sorex araneus]
Length = 435
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 257 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 316
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 317 AGRPMKVGHV 326
>gi|395745189|ref|XP_002824146.2| PREDICTED: polyadenylate-binding protein 1-like isoform 2 [Pongo
abelii]
Length = 636
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L AFS FG +T A ++M+ G RSKG+G+V FS+ EEA KA+ +MNG+++ + ++V
Sbjct: 308 ERLRKAFSPFGTITSAKVMMEGG--RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S + L D S FG + ++ D+ N SKGYG+V F T E A++A+ MNG LL+ R
Sbjct: 109 SINNKALYDTVSAFGNILSCKVVCDE--NGSKGYGFVHFETHEAAERAIEKMNGMLLNDR 166
Query: 64 VIFV 67
+FV
Sbjct: 167 KVFV 170
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L D F +FG ++ D+ +SKG+G+V+F E+AQKA+ +MNGK L G+ I+V
Sbjct: 205 ERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFEKHEDAQKAVDEMNGKELSGKQIYV 263
>gi|126291198|ref|XP_001371677.1| PREDICTED: RNA-binding protein 39 isoform 2 [Monodelphis domestica]
Length = 533
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 257 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 316
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 317 AGRPMKVGHV 326
>gi|449265754|gb|EMC76900.1| RNA-binding protein 39, partial [Columba livia]
Length = 423
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 158 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 217
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 218 AGRPMKVGHV 227
>gi|357131533|ref|XP_003567391.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 141
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+S + L DAFS FG VTE I+ DK RS+G+G+V FS + EA+ A M+GK++
Sbjct: 54 LSWSADERSLMDAFSSFGTVTEVRIMYDKNSGRSRGFGFVQFSNDYEAKCAKDAMDGKVM 113
Query: 61 DGR 63
GR
Sbjct: 114 LGR 116
>gi|298246745|ref|ZP_06970550.1| RNP-1 like RNA-binding protein [Ktedonobacter racemifer DSM
44963]
gi|297549404|gb|EFH83270.1| RNP-1 like RNA-binding protein [Ktedonobacter racemifer DSM
44963]
Length = 109
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%)
Query: 3 FSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDG 62
+ +T++ L F Q GQVT AT+I D+ RSKG+G+V S+++EA+ A+ +NG L
Sbjct: 10 YQSTEQDLIQLFEQIGQVTFATVITDRETGRSKGFGFVEMSSDDEARVAIEQLNGSTLGN 69
Query: 63 RVIFVDNVRPSR 74
R I V+ R R
Sbjct: 70 RTITVNEARERR 81
>gi|82802761|gb|ABB92431.1| PABP3 [Aotus trivirgatus]
Length = 629
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L AFS FG +T A ++M+ G RSKG+G+V FS+ EEA KA+ +MNG+++ + ++V
Sbjct: 308 ERLRKAFSPFGTITSAKVMMEGG--RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S + L D S FG + ++ D+ N SKGYG+V F T E A++A+ MNG LL+ R
Sbjct: 109 SINNKALYDTVSAFGNILSCKVVCDE--NGSKGYGFVHFETHEAAERAIEKMNGMLLNDR 166
Query: 64 VIFV 67
+FV
Sbjct: 167 KVFV 170
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L D F +FG ++ D+ +SKG+G+V+F E+AQKA+ +MNGK L G+ I+V
Sbjct: 205 ERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFEKHEDAQKAVDEMNGKELSGKQIYV 263
>gi|291233817|ref|XP_002736851.1| PREDICTED: heterogeneous nuclear ribonucleoprotein M-like
[Saccoglossus kowalevskii]
Length = 615
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T +ML D F +FG+V A I M+ G RSKGYG V F + E A+ A+ MNG +L
Sbjct: 546 LPFTYTWQMLKDKFREFGRVMYAEIKMENG--RSKGYGSVRFESPESARTAINMMNGSVL 603
Query: 61 DGRVIFV 67
DGR I V
Sbjct: 604 DGRTISV 610
>gi|126291195|ref|XP_001371651.1| PREDICTED: RNA-binding protein 39 isoform 1 [Monodelphis domestica]
Length = 524
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 257 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 316
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 317 AGRPMKVGHV 326
>gi|82802751|gb|ABB92426.1| PABP3 [Pan troglodytes]
Length = 632
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L AFS FG +T A ++M+ G RSKG+G+V FS+ EEA KA+ +MNG+++ + ++V
Sbjct: 308 ERLQKAFSPFGTITSAKVMMEGG--RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S + L D S FG + ++ D+ N SKGYG+V F T E A++A+ MNG LL+GR
Sbjct: 109 SINNKALYDTVSAFGNILSCNVVCDE--NGSKGYGFVHFETHEAAERAIEKMNGMLLNGR 166
Query: 64 VIFV 67
+FV
Sbjct: 167 KVFV 170
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L D F +FG ++ D+ +SKG+G+V+F E+AQKA+ +MNGK L+G+ I+V
Sbjct: 205 ERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
>gi|82802749|gb|ABB92425.1| PABP3 [Homo sapiens]
Length = 630
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L AFS FG +T A ++M+ G RSKG+G+V FS+ EEA KA+ +MNG+++ + ++V
Sbjct: 308 ERLRKAFSPFGTITSAKVMMEGG--RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S + L D S FG + ++ D+ N SKGYG+V F T E A++A+ MNG LL+GR
Sbjct: 109 SINNKALYDTVSAFGNILSCNVVCDE--NGSKGYGFVHFETHEAAERAIKKMNGMLLNGR 166
Query: 64 VIFV 67
+FV
Sbjct: 167 KVFV 170
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L D F +FG ++ D+ +SKG+G+V+F E+AQKA+ +MNGK L+G+ I+V
Sbjct: 205 ERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
>gi|193785136|dbj|BAG54289.1| unnamed protein product [Homo sapiens]
Length = 506
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 233 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 292
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 293 AGRPMKVGHV 302
>gi|349604477|gb|AEQ00017.1| RNA-binding protein 39-like protein, partial [Equus caballus]
Length = 374
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 240 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 299
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 300 AGRPMKVGHV 309
>gi|13278367|gb|AAH04000.1| Rbm39 protein [Mus musculus]
Length = 429
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 156 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 215
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 216 AGRPMKVGHV 225
>gi|430741539|ref|YP_007200668.1| RRM domain-containing RNA-binding protein [Singulisphaera
acidiphila DSM 18658]
gi|430013259|gb|AGA24973.1| RRM domain-containing RNA-binding protein [Singulisphaera
acidiphila DSM 18658]
Length = 119
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++ + L FSQFG V A II+D+ NRSKG+G+V T+ +AQ A+ +NG
Sbjct: 10 LTYNVNESDLEALFSQFGTVQSAQIIVDRDTNRSKGFGFVEMDTDAQAQAAIQGLNGHDH 69
Query: 61 DGRVIFVDNVRP 72
DGR + V+ +P
Sbjct: 70 DGRNLTVNEAKP 81
>gi|336464677|gb|EGO52917.1| hypothetical protein NEUTE1DRAFT_27845, partial [Neurospora
tetrasperma FGSC 2508]
Length = 102
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 45/68 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++T ML F +FG V EA ++ D+ RS+G+G+V + + +A+ A+A+M+G+
Sbjct: 2 LSWNTDDNMLRAKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYGNDADAENAIANMDGQEF 61
Query: 61 DGRVIFVD 68
DGR + VD
Sbjct: 62 DGRRVRVD 69
>gi|114649018|ref|XP_001154541.1| PREDICTED: polyadenylate-binding protein 3 isoform 5 [Pan
troglodytes]
Length = 633
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L AFS FG +T A ++M+ G RSKG+G+V FS+ EEA KA+ +MNG+++ + ++V
Sbjct: 308 ERLQKAFSPFGTITSAKVMMEGG--RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S + L D S FG + ++ D+ N SKGYG+V F T E A++A+ MNG LL+GR
Sbjct: 109 SINNKALYDTVSAFGNILSCNVVCDE--NGSKGYGFVHFETHEAAERAIEKMNGMLLNGR 166
Query: 64 VIFV 67
+FV
Sbjct: 167 KVFV 170
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L D F +FG ++ D+ +SKG+G+V+F E+AQKA+ +MNGK L+G+ I+V
Sbjct: 205 ERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
>gi|148226721|ref|NP_001086950.1| RNA binding motif protein 39 [Xenopus laevis]
gi|50414893|gb|AAH77813.1| Rnpc2-prov protein [Xenopus laevis]
Length = 540
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 256 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 315
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 316 AGRPMKVGHV 325
>gi|345008357|ref|YP_004810711.1| RNP-1 like RNA-binding protein [Streptomyces violaceusniger Tu
4113]
gi|344034706|gb|AEM80431.1| RNP-1 like RNA-binding protein [Streptomyces violaceusniger Tu
4113]
Length = 86
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ TT LA F QFG+V +AT+I D+ RS+G+G+V E A+KA+A ++G +
Sbjct: 10 LSYQTTTRDLATLFGQFGEVLDATVITDRESGRSRGFGFVEMD-ETAAEKAMAQLDGTEM 68
Query: 61 DGRVIFVDNVRPSRR 75
DGR + V R R
Sbjct: 69 DGRAVTVTEARAVSR 83
>gi|184185564|gb|ACC68962.1| RNA binding motif protein 39 isoform a (predicted) [Rhinolophus
ferrumequinum]
Length = 498
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 257 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 316
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 317 AGRPMKVGHV 326
>gi|432101442|gb|ELK29624.1| RNA-binding protein 39 [Myotis davidii]
Length = 491
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 235 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 294
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 295 AGRPMKVGHV 304
>gi|409081762|gb|EKM82121.1| hypothetical protein AGABI1DRAFT_112242 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426198598|gb|EKV48524.1| hypothetical protein AGABI2DRAFT_192114 [Agaricus bisporus var.
bisporus H97]
Length = 275
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 46/68 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S T + L D FS+FG+V + TI+ D+ +RS+G+G++ ST +EA + + ++NG L
Sbjct: 89 LSIRTVERDLDDEFSRFGRVEKVTIVYDQRSDRSRGFGFIKMSTVDEAARCIQELNGVEL 148
Query: 61 DGRVIFVD 68
+GR I VD
Sbjct: 149 NGRRIRVD 156
>gi|302788860|ref|XP_002976199.1| hypothetical protein SELMODRAFT_151090 [Selaginella moellendorffii]
gi|300156475|gb|EFJ23104.1| hypothetical protein SELMODRAFT_151090 [Selaginella moellendorffii]
Length = 343
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ TT + L DAF QFG++ E +I+DK +S+G+G++TF + AQ+AL + + K +
Sbjct: 87 LAWETTSQDLRDAFEQFGEIEEGAVIIDKATGKSRGFGFITFKHMDSAQRALKEPS-KTI 145
Query: 61 DGRVIFVD 68
DGR+ +
Sbjct: 146 DGRITVCN 153
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T+ E L + FS++G++ E + DK N+S+G+ +VT+ T E A+ A+ D N K +
Sbjct: 178 LSYETSNETLLNIFSKYGEIEEGAVAYDKNTNKSRGFAFVTYKTVEAARNAIDDPN-KTI 236
Query: 61 DGRVIFV 67
+GR + V
Sbjct: 237 EGRHVIV 243
>gi|261193242|ref|XP_002623027.1| ribosome biogenesis protein Nop4 [Ajellomyces dermatitidis
SLH14081]
gi|239589162|gb|EEQ71805.1| ribosome biogenesis protein Nop4 [Ajellomyces dermatitidis
SLH14081]
gi|327356849|gb|EGE85706.1| ribosome biogenesis protein Nop4 [Ajellomyces dermatitidis ATCC
18188]
Length = 744
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S T E L + FSQ + AT+++D +SKGYG+VTF+ E+A KAL + NG + DG+
Sbjct: 59 SATTESLTEYFSQSYPLKHATVVLDPQTKQSKGYGFVTFADHEDAAKALEEFNGSVFDGK 118
Query: 64 VIFVDNVRPSRR 75
+ ++ P R
Sbjct: 119 KLKIEVAEPRHR 130
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
+ LA F FG+V A +I +G S G+G+V + A+KAL +NGK +DGR + V
Sbjct: 174 DQLAALFRSFGKVKHA-VIPKRGTQHS-GFGFVVLRGRKNAEKALEAVNGKEIDGRTLAV 231
Query: 68 D 68
D
Sbjct: 232 D 232
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALAD 54
+ FS T E L + F QFG + A +++D +R +G +V F E+A L D
Sbjct: 330 LPFSATDETLYEHFVQFGPLRYARVVVDPETDRPRGTAFVCFWKHEDAISCLRD 383
>gi|45238849|ref|NP_112241.2| polyadenylate-binding protein 3 [Homo sapiens]
gi|28201852|sp|Q9H361.2|PABP3_HUMAN RecName: Full=Polyadenylate-binding protein 3; Short=PABP-3;
Short=Poly(A)-binding protein 3; AltName:
Full=Testis-specific poly(A)-binding protein
gi|20379668|gb|AAH27617.1| Poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
gi|119628765|gb|EAX08360.1| poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
gi|123982576|gb|ABM83029.1| poly(A) binding protein, cytoplasmic 3 [synthetic construct]
gi|123997243|gb|ABM86223.1| poly(A) binding protein, cytoplasmic 3 [synthetic construct]
gi|189055351|dbj|BAG36140.1| unnamed protein product [Homo sapiens]
Length = 631
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L AFS FG +T A ++M+ G RSKG+G+V FS+ EEA KA+ +MNG+++ + ++V
Sbjct: 308 ERLRKAFSPFGTITSAKVMMEGG--RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S + L D S FG + ++ D+ N SKGYG+V F T E A++A+ MNG LL+GR
Sbjct: 109 SINNKALYDTVSAFGNILSCNVVCDE--NGSKGYGFVHFETHEAAERAIKKMNGMLLNGR 166
Query: 64 VIFV 67
+FV
Sbjct: 167 KVFV 170
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L D F +FG ++ D+ +SKG+G+V+F E+AQKA+ +MNGK L+G+ I+V
Sbjct: 205 ERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
>gi|328713207|ref|XP_001947071.2| PREDICTED: polyadenylate-binding protein 1-like [Acyrthosiphon
pisum]
Length = 630
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L FS FG +T A ++MD G RSKG+G+V FS+ EEA KA+ DMNG+++ + ++V
Sbjct: 301 ERLRKEFSVFGTITSAKVMMDDG--RSKGFGFVCFSSPEEATKAVTDMNGRIVGTKPLYV 358
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S + + D FS FG + + D+ +SKGYG+V F E+ A +++ +NG LL+G+
Sbjct: 100 SIDNKAMYDTFSAFGNILSCKVAQDE-TGQSKGYGFVHFEMEQSATQSIEKVNGMLLNGK 158
Query: 64 VIFV 67
+FV
Sbjct: 159 KVFV 162
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
T+ ML + FS G V + D RS GY YV F +A++AL MN +L GR
Sbjct: 13 VTEAMLFEKFSTVGAVLSIRVCRDMITRRSLGYAYVNFQNMADAERALDTMNFDILKGR 71
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGK 58
L + F ++G +T + M + S+G+G+V F EEA+KA+ +++GK
Sbjct: 199 LFEMFEKYGSITSFKV-MFRDDGSSRGFGFVAFEDPEEAEKAVTELHGK 246
>gi|397482906|ref|XP_003812655.1| PREDICTED: polyadenylate-binding protein 3-like [Pan paniscus]
Length = 634
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L AFS FG +T A ++M+ G RSKG+G+V FS+ EEA KA+ +MNG+++ + ++V
Sbjct: 308 ERLRKAFSPFGTITSAKVMMEGG--RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S + L D S FG + ++ D+ N SKGYG+V F T E A++A+ MNG LL+GR
Sbjct: 109 SINNKALYDTVSAFGNILSCNVVCDE--NGSKGYGFVHFETHEAAERAIEKMNGMLLNGR 166
Query: 64 VIFV 67
+FV
Sbjct: 167 KVFV 170
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L D F +FG ++ D+ +SKG+G+V+F E+AQKA+ +MNGK L+G+ I+V
Sbjct: 205 ERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
>gi|336176066|ref|NP_001229529.1| RNA-binding protein 39 isoform d [Homo sapiens]
gi|73991836|ref|XP_865202.1| PREDICTED: RNA-binding protein 39 isoform 16 [Canis lupus
familiaris]
gi|296199705|ref|XP_002747280.1| PREDICTED: RNA-binding protein 39 isoform 3 [Callithrix jacchus]
gi|332858230|ref|XP_003316933.1| PREDICTED: uncharacterized protein LOC458443 isoform 3 [Pan
troglodytes]
gi|335304749|ref|XP_003360015.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|338719245|ref|XP_003363967.1| PREDICTED: RNA-binding protein 39 [Equus caballus]
gi|426391513|ref|XP_004062117.1| PREDICTED: RNA-binding protein 39 isoform 4 [Gorilla gorilla
gorilla]
Length = 502
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 235 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 294
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 295 AGRPMKVGHV 304
>gi|410445335|gb|ADB77883.2| Rbmy [Bos taurus]
Length = 387
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S TT+E L F ++G + E +I D+ N+S+G+ ++TF + +A+ A +MNGK L
Sbjct: 14 LSAETTEESLEAEFGKYGHIVEVLLIKDRNTNKSRGFAFITFESPADAKDAAKEMNGKFL 73
Query: 61 DGRVIFVDNV 70
DG+ I V+
Sbjct: 74 DGKTIKVEQA 83
>gi|194386804|dbj|BAG61212.1| unnamed protein product [Homo sapiens]
Length = 502
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 235 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 294
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 295 AGRPMKVGHV 304
>gi|119596573|gb|EAW76167.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_f [Homo
sapiens]
Length = 423
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 257 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 316
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 317 AGRPMKVGHV 326
>gi|57997079|emb|CAB66834.2| hypothetical protein [Homo sapiens]
Length = 631
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L AFS FG +T A ++M+ G RSKG+G+V FS+ EEA KA+ +MNG+++ + ++V
Sbjct: 308 ERLRKAFSPFGTITSAKVMMEGG--RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S + L D S FG + ++ D+ N SKGYG+V F T E A++A+ MNG LL+GR
Sbjct: 109 SINNKALYDTVSAFGNILSCNVVCDE--NGSKGYGFVHFETHEAAERAIKKMNGMLLNGR 166
Query: 64 VIFV 67
+FV
Sbjct: 167 KVFV 170
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L D F +FG ++ D+ +SKG+G+V+F E+AQKA+ +MNGK L+G+ I+V
Sbjct: 205 ERLKDLFGKFGPALSVELMTDES-GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
>gi|408392881|gb|EKJ72170.1| hypothetical protein FPSE_07657 [Fusarium pseudograminearum CS3096]
Length = 484
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 38/58 (65%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVI 65
E+L AFS FG V+EA ++ D RS+GYG+V F EA+KAL+ M+G+ L R I
Sbjct: 197 EVLTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAI 254
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 6 TKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVI 65
T+E+L F G V II DK R YG+V + A++A+ +NG+ + V
Sbjct: 94 TEEVLRQIFETTGHVQNVKIIPDK-NARGYNYGFVEYDDPGAAERAMQTLNGRRVHQSVP 152
Query: 66 FVDNVRPSR 74
+ D R S+
Sbjct: 153 YPDTTRNSK 161
>gi|226469236|emb|CAX70097.1| RNA-binding protein 39 [Schistosoma japonicum]
Length = 463
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ ++ T+EML F FG++ + +I D NRS+GYG+VT+ ++A+KAL +NG L
Sbjct: 210 LHYNITEEMLKGIFEPFGKIEDIKLIKDPATNRSQGYGFVTYVNSDDAKKALDQLNGFEL 269
Query: 61 DGRVIFVDNVRPSRRY 76
GR + V++V Y
Sbjct: 270 AGRPMKVNHVTERSEY 285
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
L D F+ G++ + +IMD RSKG YV F E AQ AL +LL
Sbjct: 120 LEDFFTSVGKIRDVRLIMDNKTKRSKGIAYVEFREVESAQLALGLTGTRLL 170
>gi|426241414|ref|XP_004014586.1| PREDICTED: RNA-binding protein 39 isoform 7 [Ovis aries]
Length = 367
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 100 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 159
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 160 TGRPMKVGHV 169
>gi|73909065|gb|AAH45608.1| Poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
Length = 631
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L AFS FG +T A ++M+ G RSKG+G+V FS+ EEA KA+ +MNG+++ + ++V
Sbjct: 308 ERLRKAFSPFGTITSAKVMMEGG--RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S + L D S FG + ++ D+ N SKGYG+V F T E A++A+ MNG LL+GR
Sbjct: 109 SINNKALYDTVSAFGNILSCNVVCDE--NGSKGYGFVHFETHEAAERAIKKMNGMLLNGR 166
Query: 64 VIFV 67
+FV
Sbjct: 167 KVFV 170
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L D F +FG ++ D+ +SKG+G+V+F E+AQKA+ +MNGK L+G+ I+V
Sbjct: 205 ERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
>gi|336176064|ref|NP_001229528.1| RNA-binding protein 39 isoform c [Homo sapiens]
gi|296199707|ref|XP_002747281.1| PREDICTED: RNA-binding protein 39 isoform 4 [Callithrix jacchus]
gi|332858228|ref|XP_003316932.1| PREDICTED: uncharacterized protein LOC458443 isoform 2 [Pan
troglodytes]
gi|335304745|ref|XP_003360013.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|338719242|ref|XP_003363966.1| PREDICTED: RNA-binding protein 39 [Equus caballus]
gi|345789990|ref|XP_003433300.1| PREDICTED: RNA-binding protein 39 [Canis lupus familiaris]
gi|426391511|ref|XP_004062116.1| PREDICTED: RNA-binding protein 39 isoform 3 [Gorilla gorilla
gorilla]
gi|124297482|gb|AAI31544.1| RBM39 protein [Homo sapiens]
gi|194389138|dbj|BAG61586.1| unnamed protein product [Homo sapiens]
Length = 508
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 235 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 294
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 295 AGRPMKVGHV 304
>gi|558629|emb|CAA57551.1| chloroplast RNA binding protein [Phaseolus vulgaris]
Length = 287
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 43/67 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+S T E+L AF ++G V A ++ D RS+GYG+V FST+EE + AL +N L
Sbjct: 211 LSWSVTNEILTQAFQEYGTVVGARVLYDGETGRSRGYGFVCFSTKEEMEAALGALNDVEL 270
Query: 61 DGRVIFV 67
+GR + V
Sbjct: 271 EGRAMRV 277
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 32/66 (48%)
Query: 3 FSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDG 62
+S LA +G ++ D+ +S+G+ +VT S E+ + +++GK G
Sbjct: 122 YSVDSAKLAGLIQDYGSAELIEVLYDRDTGKSRGFAFVTMSCIEDCNAVIENLDGKEYLG 181
Query: 63 RVIFVD 68
R + V+
Sbjct: 182 RTLRVN 187
>gi|333379577|ref|ZP_08471298.1| hypothetical protein HMPREF9456_02893 [Dysgonomonas mossii DSM
22836]
gi|332884970|gb|EGK05223.1| hypothetical protein HMPREF9456_02893 [Dysgonomonas mossii DSM
22836]
Length = 99
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ L F ++G + A +IMD+ +RSKGYG+V E+A KA++ +NG
Sbjct: 8 LSYDVNDADLNTFFKEYGVINSAKVIMDRSTSRSKGYGFVEMDNNEDANKAISKLNGVEY 67
Query: 61 DGRVIFVDNVRPSRRYNTDA 80
DGR I V RP + N ++
Sbjct: 68 DGRTISVSEARPRQERNNNS 87
>gi|195611722|gb|ACG27691.1| ribonucleoprotein [Zea mays]
Length = 341
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ ++ T E LA FS+ G+V +A II DK NRS+G+ +VT +T EEA KA+ +G LL
Sbjct: 119 LPYTYTSEELAQVFSEAGRVDDAQIIYDKVTNRSRGFAFVTMATAEEAAKAIQMFDGALL 178
Query: 61 DGRVIFVD 68
GR V+
Sbjct: 179 GGRTARVN 186
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 39/65 (60%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ + + L + F + +A +I ++ RS+G+G+V+FST E+AQ AL ++G L
Sbjct: 218 LGWGVRADTLRNVFEGRAGLLDARVIFERETGRSRGFGFVSFSTAEDAQAALESLDGVEL 277
Query: 61 DGRVI 65
+GR +
Sbjct: 278 EGRPL 282
>gi|426241412|ref|XP_004014585.1| PREDICTED: RNA-binding protein 39 isoform 6 [Ovis aries]
gi|426241416|ref|XP_004014587.1| PREDICTED: RNA-binding protein 39 isoform 8 [Ovis aries]
Length = 373
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 100 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 159
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 160 TGRPMKVGHV 169
>gi|444318191|ref|XP_004179753.1| hypothetical protein TBLA_0C04360 [Tetrapisispora blattae CBS 6284]
gi|387512794|emb|CCH60234.1| hypothetical protein TBLA_0C04360 [Tetrapisispora blattae CBS 6284]
Length = 403
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 41/68 (60%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+S E L F G V A +I +KG +RS+GYGYV F + A+KA+ +M GK +
Sbjct: 168 LSWSIDDEWLKTEFEPIGGVLSARVIYEKGTDRSRGYGYVDFKNKTFAEKAIKEMQGKEI 227
Query: 61 DGRVIFVD 68
DGR I D
Sbjct: 228 DGRPINCD 235
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 39/72 (54%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF ++ + + FS++G++ I + KG+GYV + E A+KAL + G+ +
Sbjct: 268 LSFDADRDNIYEVFSKYGEIISVRIPTHPETEQPKGFGYVQYGDVESAKKALDALQGEYI 327
Query: 61 DGRVIFVDNVRP 72
+ R + +D P
Sbjct: 328 NNRPVRLDFSTP 339
>gi|224071049|ref|XP_002303346.1| predicted protein [Populus trichocarpa]
gi|222840778|gb|EEE78325.1| predicted protein [Populus trichocarpa]
Length = 164
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 47/74 (63%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ S ++ L FS FG++ E ++ D+ RSK Y ++ ++++++A AL +M+ K L
Sbjct: 61 IGHSISEATLQKEFSNFGEIAEVKLVKDETIKRSKPYAFIQYTSQDDAILALENMDRKTL 120
Query: 61 DGRVIFVDNVRPSR 74
DGR+IFVD +P +
Sbjct: 121 DGRLIFVDLAKPGK 134
>gi|160899081|ref|YP_001564663.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
gi|333914782|ref|YP_004488514.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
gi|160364665|gb|ABX36278.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
gi|333744982|gb|AEF90159.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
Length = 115
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%)
Query: 3 FSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDG 62
+S T L F++FG V A ++MD+ RSKG+G+V ++ E AQ A+ ++G +DG
Sbjct: 12 YSVTDSSLESNFAEFGNVASAKVMMDRETGRSKGFGFVEMASAEVAQAAITGLHGMSVDG 71
Query: 63 RVIFVDNVRP 72
R I V+ RP
Sbjct: 72 RSIVVNLARP 81
>gi|440797930|gb|ELR19004.1| polyadenylate-binding protein family protein [Acanthamoeba
castellanii str. Neff]
Length = 462
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S + L D FS FG + ++ D GK SKGYG+V + T E A A+A +NGK+L+G+
Sbjct: 108 SIDNKALYDTFSAFGNILSCKVVTD-GKGNSKGYGFVHYETSEAADSAIAKVNGKMLNGK 166
Query: 64 VIFV 67
+++V
Sbjct: 167 IVYV 170
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 8 EMLADAFSQ--FGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVI 65
E L FS FGQ+T ++ D K S+G+G+V ++ E+A KA+++MNGK++ + I
Sbjct: 302 EELHKLFSALPFGQITSCKVMSDD-KGNSRGFGFVCYTNPEDASKAVSEMNGKMVANKPI 360
Query: 66 FV 67
+V
Sbjct: 361 YV 362
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
+ T+ +L + F G V + D RS GY YV F +A++AL +N L+ GR
Sbjct: 20 TVTEALLFEIFKAVGPVASIRVCRDAVTRRSLGYAYVNFHNVVDAERALDTLNYTLIKGR 79
>gi|301310455|ref|ZP_07216394.1| glycine-rich RNA-binding protein 8 (Protein CCR1) [Bacteroides
sp. 20_3]
gi|423336704|ref|ZP_17314451.1| hypothetical protein HMPREF1059_00403 [Parabacteroides distasonis
CL09T03C24]
gi|300832029|gb|EFK62660.1| glycine-rich RNA-binding protein 8 (Protein CCR1) [Bacteroides
sp. 20_3]
gi|409240584|gb|EKN33362.1| hypothetical protein HMPREF1059_00403 [Parabacteroides distasonis
CL09T03C24]
Length = 123
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 47/72 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++ + E L F+ +G++T A +IMD+ RS+G+G+V S +E A+KA+ ++N
Sbjct: 8 LSYNISDEDLRQLFADYGEITSAKVIMDRETGRSRGFGFVELSDDELAKKAIEELNQASY 67
Query: 61 DGRVIFVDNVRP 72
DG+VI + RP
Sbjct: 68 DGKVINITEARP 79
>gi|301125993|ref|XP_002909814.1| polyadenylate-binding protein, putative [Phytophthora infestans
T30-4]
gi|262103703|gb|EEY61755.1| polyadenylate-binding protein, putative [Phytophthora infestans
T30-4]
Length = 587
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
L +AF++ G +T + ++ D N S+G+G+V FST EEA KA+A+MNGKL+ G+ ++V
Sbjct: 294 LREAFAECGTITSSRVMRDPNGN-SRGFGFVCFSTPEEANKAVAEMNGKLISGKPVYV 350
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S + L D FS FG + + ++ SKGYGYV + T E A +A+A +NG L+ G
Sbjct: 89 SIDNKALYDTFSLFGNILSCKVAIEHTTGNSKGYGYVHYETAEAATEAIAKINGMLIAGT 148
Query: 64 VIFVDN 69
+FV +
Sbjct: 149 EVFVGH 154
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 10 LADAFSQFGQVTEATIIMDKGK-NRSKGYGYVTFSTEEEAQKALADMNGK 58
L F FG+V A ++ D + ++G+G+V + + A KA+ +NGK
Sbjct: 184 LLKEFEPFGKVLSAVVMKDNANPDHNRGFGFVNYEESDAAHKAVDALNGK 233
>gi|46122079|ref|XP_385593.1| hypothetical protein FG05417.1 [Gibberella zeae PH-1]
Length = 473
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 38/58 (65%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVI 65
E+L AFS FG V+EA ++ D RS+GYG+V F EA+KAL+ M+G+ L R I
Sbjct: 186 EVLTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAI 243
>gi|298244419|ref|ZP_06968225.1| RNP-1 like RNA-binding protein [Ktedonobacter racemifer DSM
44963]
gi|297551900|gb|EFH85765.1| RNP-1 like RNA-binding protein [Ktedonobacter racemifer DSM
44963]
Length = 106
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%)
Query: 3 FSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDG 62
+ +T++ L F Q GQVT AT+I D+ RSKG+G+V S+++EA+ A+ +NG L
Sbjct: 10 YQSTEQDLIQLFEQIGQVTFATVITDRETGRSKGFGFVEMSSDDEARAAIEQLNGSTLGD 69
Query: 63 RVIFVDNVRPSR 74
R I V+ R R
Sbjct: 70 RTITVNEARERR 81
>gi|293332827|ref|NP_001169335.1| uncharacterized protein LOC100383202 [Zea mays]
gi|224028769|gb|ACN33460.1| unknown [Zea mays]
gi|413918115|gb|AFW58047.1| hypothetical protein ZEAMMB73_457780 [Zea mays]
Length = 714
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 37/58 (63%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
L FSQFG + A +I D+ +SKGYG+V +S EA A+A MNG L+GRVI V
Sbjct: 436 LVSLFSQFGDIVMAKVIKDRNTGQSKGYGFVKYSDVSEANAAIAAMNGHHLEGRVIAV 493
>gi|226497258|ref|NP_001140274.1| uncharacterized protein LOC100272318 [Zea mays]
gi|194698792|gb|ACF83480.1| unknown [Zea mays]
gi|414883568|tpg|DAA59582.1| TPA: ribonucleoprotein [Zea mays]
Length = 341
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ ++ T E LA FS+ G+V +A II DK NRS+G+ +VT +T EEA KA+ +G LL
Sbjct: 119 LPYTYTSEELAQVFSEAGRVDDAQIIYDKVTNRSRGFAFVTMATAEEAAKAIQMFDGALL 178
Query: 61 DGRVIFVD 68
GR V+
Sbjct: 179 GGRTARVN 186
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 39/65 (60%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ + + L + F + +A +I ++ RS+G+G+V+FST E+AQ AL ++G L
Sbjct: 218 LGWGVRADTLRNVFEGRAGLLDARVIFERETGRSRGFGFVSFSTAEDAQAALESLDGVEL 277
Query: 61 DGRVI 65
+GR +
Sbjct: 278 EGRSL 282
>gi|165875543|gb|ABY68599.1| poly(A) binding protein cytoplasmic 1 [Ovis aries]
Length = 289
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L FS FG +T A ++M+ G RSKG+G+V FS+ EEA KA+ +MNG+++ + ++V
Sbjct: 25 ERLRKEFSPFGTITSAKVMMEGG--RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 82
>gi|255556984|ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223541388|gb|EEF42939.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 280
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+S L FS+ G+V +A ++ D+ RS+G+G+VT+S+ EE + A+ +NG L
Sbjct: 203 LSWSVDNLALESFFSEQGKVVDAKVVYDRESGRSRGFGFVTYSSAEEVENAIDSLNGAEL 262
Query: 61 DGRVIFVD--NVRPSRRY 76
DGR I V RP R++
Sbjct: 263 DGRAIRVSVAEARPRRQF 280
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%)
Query: 3 FSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDG 62
F+ LA F G V +I DK RS+G+G+VT S+ +E + A NG L+G
Sbjct: 101 FNVDSAQLAGLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSIDEVEAAAQQFNGYELEG 160
Query: 63 RVIFVDNVRPSRR 75
R + V++ P +R
Sbjct: 161 RALRVNSGPPPQR 173
>gi|681904|dbj|BAA06519.1| RNA-binding protein cp29 [Arabidopsis thaliana]
Length = 326
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ L + F++ G+V EA +I D+ RSKG+G+VT S+ +E QKA+ +NG L
Sbjct: 248 LSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNGADL 307
Query: 61 DGRVIFVD--NVRPSR 74
DGR I V RP R
Sbjct: 308 DGRQIRVSEAEARPPR 323
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 36/72 (50%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF+ LA F G V +I DK RS+G+G+VT ST E + A NG
Sbjct: 98 LSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEF 157
Query: 61 DGRVIFVDNVRP 72
+GR + V+ P
Sbjct: 158 EGRPLRVNAGPP 169
>gi|165940926|gb|ABY75308.1| cytoplasmic 1 polyA binding protein [Ovis aries]
Length = 305
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L FS FG +T A ++M+ G RSKG+G+V FS+ EEA KA+ +MNG+++ + ++V
Sbjct: 37 ERLRKEFSPFGTITSAKVMMEGG--RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 94
>gi|15231817|ref|NP_190914.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|186511018|ref|NP_850692.2| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|334185948|ref|NP_001190078.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|30316379|sp|Q43349.2|ROC2_ARATH RecName: Full=29 kDa ribonucleoprotein, chloroplastic; AltName:
Full=RNA-binding protein cp29; Flags: Precursor
gi|6729497|emb|CAB67653.1| RNA-binding protein cp29 protein [Arabidopsis thaliana]
gi|14532570|gb|AAK64013.1| AT3g53460/F4P12_160 [Arabidopsis thaliana]
gi|18655393|gb|AAL76152.1| AT3g53460/F4P12_160 [Arabidopsis thaliana]
gi|21593426|gb|AAM65393.1| RNA-binding protein cp29 protein [Arabidopsis thaliana]
gi|332645568|gb|AEE79089.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|332645569|gb|AEE79090.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|332645570|gb|AEE79091.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
Length = 342
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ L + F++ G+V EA +I D+ RSKG+G+VT S+ +E QKA+ +NG L
Sbjct: 264 LSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNGADL 323
Query: 61 DGRVIFVD--NVRPSR 74
DGR I V RP R
Sbjct: 324 DGRQIRVSEAEARPPR 339
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 36/72 (50%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF+ LA F G V +I DK RS+G+G+VT ST E + A NG
Sbjct: 106 LSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEF 165
Query: 61 DGRVIFVDNVRP 72
+GR + V+ P
Sbjct: 166 EGRPLRVNAGPP 177
>gi|681902|dbj|BAA06518.1| RNA-binding protein cp29 [Arabidopsis thaliana]
Length = 334
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ L + F++ G+V EA +I D+ RSKG+G+VT S+ +E QKA+ +NG L
Sbjct: 256 LSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNGADL 315
Query: 61 DGRVIFVD--NVRPSR 74
DGR I V RP R
Sbjct: 316 DGRQIRVSEAEARPPR 331
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 36/72 (50%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF+ LA F G V +I DK RS+G+G+VT ST E + A NG
Sbjct: 106 LSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEF 165
Query: 61 DGRVIFVDNVRP 72
+GR + V+ P
Sbjct: 166 EGRPLRVNAGPP 177
>gi|334185950|ref|NP_001190079.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|332645571|gb|AEE79092.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
Length = 363
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ L + F++ G+V EA +I D+ RSKG+G+VT S+ +E QKA+ +NG L
Sbjct: 285 LSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNGADL 344
Query: 61 DGRVIFVD--NVRPSR 74
DGR I V RP R
Sbjct: 345 DGRQIRVSEAEARPPR 360
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNG 57
+SF+ LA F G V +I DK RS+G+G+VT ST E + A NG
Sbjct: 106 LSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNG 162
>gi|325279880|ref|YP_004252422.1| RNP-1 like RNA-binding protein [Odoribacter splanchnicus DSM
20712]
gi|324311689|gb|ADY32242.1| RNP-1 like RNA-binding protein [Odoribacter splanchnicus DSM
20712]
Length = 99
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ TT L + FS++G+++ A II D+ RS+G+G+V + + E QKA+ ++NG
Sbjct: 8 LSYGTTDADLNELFSEYGEISSAKIISDRETGRSRGFGFVEMTNDTEGQKAIDELNGAEY 67
Query: 61 DGRVIFVDNVRP 72
D +VI V RP
Sbjct: 68 DHKVIAVSIARP 79
>gi|255563618|ref|XP_002522811.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223538049|gb|EEF39662.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 134
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 43/67 (64%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T + L DAFS FG V A +I D+ RS+G+G+V FS+ + A AL+ M+G+ L
Sbjct: 43 LSYGTNDDSLKDAFSGFGDVVTARVITDRDTGRSRGFGFVDFSSVDSASSALSAMDGQEL 102
Query: 61 DGRVIFV 67
GR I V
Sbjct: 103 HGRNIRV 109
>gi|449525794|ref|XP_004169901.1| PREDICTED: uncharacterized protein LOC101231499 [Cucumis sativus]
Length = 266
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ T KE + D F +FG++ EA II DK RSKGYG+VTF E A+KA D + ++
Sbjct: 33 LAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACED-SAPII 91
Query: 61 DGR 63
+GR
Sbjct: 92 NGR 94
>gi|449451717|ref|XP_004143608.1| PREDICTED: uncharacterized protein LOC101202850 [Cucumis sativus]
Length = 266
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ T KE + D F +FG++ EA II DK RSKGYG+VTF E A+KA D + ++
Sbjct: 33 LAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACED-SAPII 91
Query: 61 DGR 63
+GR
Sbjct: 92 NGR 94
>gi|346319566|gb|EGX89167.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Cordyceps militaris CM01]
Length = 450
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 38/58 (65%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVI 65
E+L AFS FG V+EA ++ D RS+GYG+V F EA+KAL+ M+G+ L R I
Sbjct: 174 EILTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAI 231
>gi|52346030|ref|NP_001005062.1| embryonic polyadenylate-binding protein [Xenopus (Silurana)
tropicalis]
gi|82235830|sp|Q6DEY7.1|EPAB_XENTR RecName: Full=Embryonic polyadenylate-binding protein;
Short=Embryonic poly(A)-binding protein; Short=ePABP
gi|49899948|gb|AAH76956.1| MGC89376 protein [Xenopus (Silurana) tropicalis]
Length = 629
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFVDN 69
L + FS FG ++MD RS+G+G+V + EEAQKA+++MNGK ++GR+I+V
Sbjct: 207 LREIFSAFGNTLSVKVMMDD-TGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVG- 264
Query: 70 VRPSRRYNTDAPLARQLPQSPEE 92
R +R L R+ Q +E
Sbjct: 265 -RAQKRIERQGELKRKFEQIKQE 286
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S + L D FS FG + ++ D+ + S+GYG+V F T+E A +A+ MNG LL+ R
Sbjct: 109 SIDNKALYDTFSAFGNILSCKVVCDE--HGSRGYGFVHFETQEAANRAIQTMNGMLLNDR 166
Query: 64 VIFVDNVRPSRR 75
+FV + + SRR
Sbjct: 167 KVFVGHFK-SRR 177
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
L FS +G +T A ++ + G SKG+G+V FS+ EEA KA+ +MNG+++ + ++V
Sbjct: 310 LRKEFSPYGTITSAKVMTEGG--HSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYV 365
>gi|302038618|ref|YP_003798940.1| putative RNA-binding protein RbpA [Candidatus Nitrospira
defluvii]
gi|300606682|emb|CBK43015.1| putative RNA-binding protein RbpA [Candidatus Nitrospira
defluvii]
Length = 108
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 46/70 (65%)
Query: 3 FSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDG 62
+S T++ L+D F+ G V A II DK +S+G+G+V ++ +EAQKA++ +NG + G
Sbjct: 12 YSATEQQLSDLFAVHGAVESARIITDKFTGQSRGFGFVEMASSDEAQKAISALNGTDMGG 71
Query: 63 RVIFVDNVRP 72
R + V+ RP
Sbjct: 72 RTLTVNEARP 81
>gi|284108895|ref|ZP_06386469.1| RNP-1 like RNA-binding protein [Candidatus Poribacteria sp.
WGA-A3]
gi|283829840|gb|EFC34132.1| RNP-1 like RNA-binding protein [Candidatus Poribacteria sp.
WGA-A3]
Length = 90
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+STT + L D F+Q G V A ++ D+ RS+G+G+V + EEA +A+ +NG
Sbjct: 10 LSYSTTDQELQDLFAQHGTVQSANVVTDRYTGRSRGFGFVEMGSGEEAGQAIEALNGTDF 69
Query: 61 DGRVIFVDNVRPSRR 75
GR + V+ RP +
Sbjct: 70 QGRSLVVNEARPKEK 84
>gi|301120388|ref|XP_002907921.1| polyadenylate-binding protein 1-B [Phytophthora infestans T30-4]
gi|262102952|gb|EEY61004.1| polyadenylate-binding protein 1-B [Phytophthora infestans T30-4]
Length = 640
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
L +AF++ G +T + ++ D N S+G+G+V FST EEA KA+A+MNGKL+ G+ ++V
Sbjct: 348 LREAFAECGTITSSRVMRDPNGN-SRGFGFVCFSTPEEANKAVAEMNGKLISGKPVYV 404
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S + L D FS FG + + ++ SKGYGYV + T E A +A+A +NG L+ G
Sbjct: 143 SIDNKALYDTFSLFGNILSCKVAIEHTTGNSKGYGYVHYETAEAATEAIAKINGMLIAGT 202
Query: 64 VIFV 67
+FV
Sbjct: 203 EVFV 206
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMN 56
T+ +L + F+ G V + D RS GY YV F +A++AL MN
Sbjct: 56 VTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVADAERALDTMN 107
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 10 LADAFSQFGQVTEATIIMDKGK-NRSKGYGYVTFSTEEEAQKALADMNGK 58
L F FG+V A ++ D + ++G+G+V + + A KA+ +NGK
Sbjct: 238 LLKEFEPFGKVLSAVVMKDNANPDHNRGFGFVNYEESDAAHKAVDALNGK 287
>gi|297820076|ref|XP_002877921.1| hypothetical protein ARALYDRAFT_348440 [Arabidopsis lyrata subsp.
lyrata]
gi|297323759|gb|EFH54180.1| hypothetical protein ARALYDRAFT_348440 [Arabidopsis lyrata subsp.
lyrata]
Length = 339
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ L + F++ G+V EA +I D+ RSKG+G+VT S+ +E QKA+ +NG L
Sbjct: 261 LSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNGADL 320
Query: 61 DGRVIFVD--NVRPSR 74
DGR I V RP R
Sbjct: 321 DGRQIRVSEAEARPPR 336
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF+ LA F G V +I DK RS+G+G+VT ST E + A NG
Sbjct: 106 LSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEF 165
Query: 61 DGRVIFVD 68
+GR + V+
Sbjct: 166 EGRPLRVN 173
>gi|410055060|ref|XP_003953766.1| PREDICTED: uncharacterized protein LOC458443 [Pan troglodytes]
gi|426391517|ref|XP_004062119.1| PREDICTED: RNA-binding protein 39 isoform 6 [Gorilla gorilla
gorilla]
gi|20988961|gb|AAH30493.1| Rbm39 protein [Mus musculus]
gi|34364789|emb|CAE45833.1| hypothetical protein [Homo sapiens]
gi|111598490|gb|AAH82607.1| Rbm39 protein [Mus musculus]
gi|119596570|gb|EAW76164.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_d [Homo
sapiens]
gi|149030835|gb|EDL85862.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_g [Rattus
norvegicus]
Length = 367
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 100 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 159
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 160 AGRPMKVGHV 169
>gi|1346180|sp|P49310.1|GRP1_SINAL RecName: Full=Glycine-rich RNA-binding protein GRP1A
gi|496233|gb|AAA59212.1| homology with RNA-binding proteins in meristematic tissue
[Sinapis alba]
Length = 166
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 46/68 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
++++T L AFSQ+G+V ++ II D+ RS+G+G+VTF E+ + A+ MNG+ L
Sbjct: 15 LAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDL 74
Query: 61 DGRVIFVD 68
DGR I V+
Sbjct: 75 DGRSITVN 82
>gi|47212427|emb|CAF93583.1| unnamed protein product [Tetraodon nigroviridis]
Length = 500
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T+EML F FG++ +++D RSKGYG++TF+ E A+KAL +NG L
Sbjct: 238 LHFNITEEMLRGIFEPFGRIENIQLMVDSDTGRSKGYGFITFADAECAKKALEQLNGFEL 297
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 298 AGRPMKVGHV 307
>gi|407927556|gb|EKG20446.1| hypothetical protein MPH_02256 [Macrophomina phaseolina MS6]
Length = 485
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 39/58 (67%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVI 65
E+L AFS FGQV+EA ++ D RS+GYG+V F +A+KAL+ M+G+ L R I
Sbjct: 194 EVLLQAFSAFGQVSEARVMWDMKTGRSRGYGFVAFRDRGDAEKALSSMDGEWLGSRAI 251
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 6 TKEMLADAFSQFGQVTEATIIMDKGKNRSKG--YGYVTFSTEEEAQKALADMNGKLLDGR 63
T+++L F G V II DK K +SKG YG+V + A++A+ +NG+ +
Sbjct: 99 TEDVLRQIFETAGHVVSVKIIPDKNKFQSKGLNYGFVEYDDPGTAERAMQTLNGRRVHQS 158
Query: 64 VIFVD 68
I V+
Sbjct: 159 EIRVN 163
>gi|355715684|gb|AES05403.1| RNA binding motif protein 39 [Mustela putorius furo]
Length = 271
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 137 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 196
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 197 AGRPMKVGHV 206
>gi|11610605|gb|AAG38953.1|AF132026_1 testis-specific poly(A)-binding protein [Homo sapiens]
Length = 631
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L AFS FG +T A ++M+ G RSKG+G+V FS+ EEA KA+ +MNG+++ + ++V
Sbjct: 308 ERLRKAFSPFGTITSAKVMMEGG--RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S + L D S FG + ++ D+ N SKGYG+V F T E A++A+ MNG LL+GR
Sbjct: 109 SINNKALYDTVSAFGNILSCNVVCDE--NGSKGYGFVHFETHEAAERAIKKMNGMLLNGR 166
Query: 64 VIFV 67
+FV
Sbjct: 167 KVFV 170
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L D F +FG ++ D+ +SKG+G+V+F E+AQKA+ +MNGK L+G+ I+V
Sbjct: 205 ERLKDLFGKFGPALSVKVMTDES-GKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYV 263
>gi|154270523|ref|XP_001536116.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150409920|gb|EDN05308.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 633
Score = 61.2 bits (147), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S T E L + FSQ + AT+++D +SKGYG+VTF+ E+A KAL + NG DGR
Sbjct: 52 SATTESLTEYFSQSYPLKHATVVLDPQTKQSKGYGFVTFADHEDAAKALEEFNGSDFDGR 111
Query: 64 VIFVDNVRPSRR 75
+ ++ P R
Sbjct: 112 KLKIEVAEPRHR 123
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
+ L++ F FG+V A +I +G S G+G+V + A+KAL +NGK +DGR + V
Sbjct: 167 DQLSNLFRSFGKVKHA-VIPKRGTKHS-GFGFVVLRGRKNAEKALNAVNGKEVDGRTLAV 224
Query: 68 D 68
D
Sbjct: 225 D 225
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 3 FSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALAD 54
F+ T + L + F QFG + A +++D +R +G +V F E+A L D
Sbjct: 276 FNATDDSLYEHFVQFGPLRYARVVVDAETDRPRGTAFVCFWKNEDAISCLRD 327
>gi|34365067|emb|CAE45890.1| hypothetical protein [Homo sapiens]
Length = 373
Score = 61.2 bits (147), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 100 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 159
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 160 AGRPMKVGHV 169
>gi|31873732|emb|CAD97833.1| hypothetical protein [Homo sapiens]
Length = 373
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 100 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 159
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 160 AGRPMKVGHV 169
>gi|375145012|ref|YP_005007453.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
gi|361059058|gb|AEV98049.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
Length = 105
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 47/72 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ E L D F+ +G++T A IIMD+ +S+G+G+V + EA+KA+A+++ ++
Sbjct: 8 LGFNVQDEDLKDFFAPYGEITSAKIIMDRETGKSRGFGFVEMPNDAEAKKAIAELDQAMV 67
Query: 61 DGRVIFVDNVRP 72
+GR I V RP
Sbjct: 68 EGRAIKVVEARP 79
>gi|242035621|ref|XP_002465205.1| hypothetical protein SORBIDRAFT_01g034120 [Sorghum bicolor]
gi|241919059|gb|EER92203.1| hypothetical protein SORBIDRAFT_01g034120 [Sorghum bicolor]
Length = 262
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ LA+ FS+ G+V EA I+ D+ RS+G+G+VT+ + EE + A+++++G L
Sbjct: 184 LSWGVDNSALANLFSEQGEVLEARIVYDRESGRSRGFGFVTYGSAEEVENAISNLDGSDL 243
Query: 61 DGRVI--FVDNVRPSRR 75
DGR I V +P RR
Sbjct: 244 DGRQIRVTVAESKPPRR 260
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ FS LA F Q G V +I DK RS+G+G+VT S+ +E + A+ NG +L
Sbjct: 90 LPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVQEVEAAVEQFNGYVL 149
Query: 61 DGRVIFVDNVRPSRR 75
DGR + V++ P R
Sbjct: 150 DGRSLRVNSGPPPPR 164
>gi|410055058|ref|XP_003316934.2| PREDICTED: uncharacterized protein LOC458443 isoform 4 [Pan
troglodytes]
gi|410055062|ref|XP_003953767.1| PREDICTED: uncharacterized protein LOC458443 [Pan troglodytes]
gi|426391515|ref|XP_004062118.1| PREDICTED: RNA-binding protein 39 isoform 5 [Gorilla gorilla
gorilla]
gi|426391519|ref|XP_004062120.1| PREDICTED: RNA-binding protein 39 isoform 7 [Gorilla gorilla
gorilla]
gi|119596566|gb|EAW76160.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_b [Homo
sapiens]
gi|119596571|gb|EAW76165.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_b [Homo
sapiens]
Length = 373
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ F+ T++ML F FG++ ++MD RSKGYG++TFS E A+KAL +NG L
Sbjct: 100 LHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFEL 159
Query: 61 DGRVIFVDNV 70
GR + V +V
Sbjct: 160 AGRPMKVGHV 169
>gi|320165600|gb|EFW42499.1| nuclear localization sequence binding protein [Capsaspora
owczarzaki ATCC 30864]
Length = 321
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 46/68 (67%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++ +K+ L + FSQ+ +T+A I D+ +RSKG+G+V FS + A KAL ++NG L
Sbjct: 167 LSWAVSKDDLYNHFSQYEGLTDARIAWDRDMDRSKGFGHVEFSNADSAAKALEELNGSDL 226
Query: 61 DGRVIFVD 68
GR I +D
Sbjct: 227 GGRAIRLD 234
>gi|168988195|gb|ACA35266.1| nuclear transport family protein [Cucumis sativus]
Length = 565
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+S T E+L AF ++G V A +I D +S+GYG+V++ST+ E + AL +N L
Sbjct: 32 LSWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETALETINELEL 91
Query: 61 DGRVIFV 67
+GRVI V
Sbjct: 92 EGRVIRV 98
>gi|339501141|ref|YP_004699176.1| RNP-1 like RNA-binding protein [Spirochaeta caldaria DSM 7334]
gi|338835490|gb|AEJ20668.1| RNP-1 like RNA-binding protein [Spirochaeta caldaria DSM 7334]
Length = 116
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 45/68 (66%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++T+++ L + FS FG V A II D+ SKG+G+V ST+EEA A+A NG+
Sbjct: 31 LSYNTSEDSLRNLFSNFGSVASAKIIFDRETGNSKGFGFVEMSTDEEASAAIAGTNGREF 90
Query: 61 DGRVIFVD 68
+GR + V+
Sbjct: 91 EGRQLRVN 98
>gi|304376936|gb|ACI70007.2| Cold-inducible RNA-binding protein [Salmo salar]
Length = 82
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF TT+E LA+AF+++G + + +I DK RS+G+G+V + E+A+ AL MNGK +
Sbjct: 12 LSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDALDGMNGKSV 71
Query: 61 DGRVIFV 67
D +IFV
Sbjct: 72 D-LMIFV 77
>gi|406964974|gb|EKD90666.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 118
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ FS T E L + F ++G V+ A IIMDK N+SKG+ +V + EAQ A+ +++G L
Sbjct: 9 IPFSLTNEKLKELFEKYGTVSSAQIIMDKYTNQSKGFAFVEMPNDTEAQTAIKELDGFGL 68
Query: 61 DGRVIFVDNVRP 72
+GR I V RP
Sbjct: 69 EGRKIGVSVARP 80
>gi|78186885|ref|YP_374928.1| RNA recognition motif-containing protein [Chlorobium luteolum DSM
273]
gi|78166787|gb|ABB23885.1| RNA-binding region RNP-1 (RNA recognition motif) [Chlorobium
luteolum DSM 273]
Length = 90
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+ ++ +++ L DAFS+FG+V A II DK RSKG+G+V ++ A++A+ M+ K
Sbjct: 8 LPYTISEDDLRDAFSEFGEVASANIITDKFSGRSKGFGFVEMPDDDAAREAIESMHNKDF 67
Query: 61 DGRVIFVDNVRP 72
GR I V+ +P
Sbjct: 68 KGRSIMVNEAKP 79
>gi|414587608|tpg|DAA38179.1| TPA: hypothetical protein ZEAMMB73_126317 [Zea mays]
Length = 750
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 38/58 (65%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
L FSQFG++ A +I D+ +SKGYG+V +S +A A+A MNG L+GRVI V
Sbjct: 443 LVSLFSQFGEIVMAKVIKDRNTGQSKGYGFVKYSDVSQANAAIAAMNGHHLEGRVIAV 500
>gi|333993552|ref|YP_004526165.1| RNP-1 like RNA-binding protein [Treponema azotonutricium ZAS-9]
gi|333734416|gb|AEF80365.1| RNP-1 like RNA-binding protein [Treponema azotonutricium ZAS-9]
Length = 100
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ TT++ L + FSQFG VT + II D+ SKG+G++ ST+EEA A+ NG
Sbjct: 10 LSYQTTEDGLRNLFSQFGNVTSSKIIFDRESGSSKGFGFIEMSTDEEAAAAITGTNGHEF 69
Query: 61 DGRVIFVDNV--RPSR 74
+GR + V+ +P R
Sbjct: 70 EGRQLRVNEAMDKPRR 85
>gi|115478330|ref|NP_001062760.1| Os09g0279500 [Oryza sativa Japonica Group]
gi|49387841|dbj|BAD26506.1| putative plastid-specific ribosomal protein 2 precursor [Oryza
sativa Japonica Group]
gi|49388840|dbj|BAD26030.1| putative plastid-specific ribosomal protein 2 precursor [Oryza
sativa Japonica Group]
gi|113630993|dbj|BAF24674.1| Os09g0279500 [Oryza sativa Japonica Group]
gi|215695254|dbj|BAG90445.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737768|dbj|BAG96898.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641205|gb|EEE69337.1| hypothetical protein OsJ_28655 [Oryza sativa Japonica Group]
Length = 245
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 43/65 (66%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S T EML + FS+ G+V AT+ G +SKGYG+VTFS+EEE Q A++ N L+G+
Sbjct: 179 SVTTEMLKNFFSEKGEVLSATVSRIPGTAKSKGYGFVTFSSEEEVQAAVSTFNNAELEGQ 238
Query: 64 VIFVD 68
I V+
Sbjct: 239 PIRVN 243
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
+ T + LA F+ G V A ++ DK RS+ +G+VT ST EEA A+ +N + GR
Sbjct: 80 TVTNDELAAMFADHGTVERAEVMFDKYTGRSRRFGFVTMSTPEEANAAIESLNETEVGGR 139
Query: 64 VIFVD 68
I V+
Sbjct: 140 KIKVN 144
>gi|342889186|gb|EGU88353.1| hypothetical protein FOXB_01152 [Fusarium oxysporum Fo5176]
Length = 170
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+++ T + L F +FG V EA ++ D+ RS+G+G+V ++ E +AQKA+A MN
Sbjct: 9 LAWHTEEATLRQKFEEFGPVEEAVVVKDRDTGRSRGFGFVRYTQEGDAQKAIATMNNVEF 68
Query: 61 DGRVIFVDNV 70
DGR I VD
Sbjct: 69 DGRTIRVDKA 78
>gi|330830028|ref|YP_004392980.1| RNA-binding protein [Aeromonas veronii B565]
gi|328805164|gb|AEB50363.1| RNA-binding protein [Aeromonas veronii B565]
Length = 82
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 6 TKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVI 65
T + L FSQFGQV + II+D+ +SKG+G++ +A+KA+A ++G + GR I
Sbjct: 2 TADELKTLFSQFGQVDKVDIIIDRDTGQSKGFGFIEMPVNGDAEKAIAGLHGTEVGGRTI 61
Query: 66 FVDNVRPSRRYNTDAPLAR 84
V+ +P TDAP R
Sbjct: 62 TVNQAKP----KTDAPRGR 76
>gi|222612603|gb|EEE50735.1| hypothetical protein OsJ_31052 [Oryza sativa Japonica Group]
Length = 118
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 45/61 (73%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S+ T + L +AF+ +G+V EA +I+D+ RS+G+G+VT+++ +EA A+ M+GK++
Sbjct: 38 ISYGTDDQSLKEAFANYGEVIEARVIVDRTTGRSRGFGFVTYTSTDEAAAAITGMDGKVM 97
Query: 61 D 61
D
Sbjct: 98 D 98
>gi|407688765|ref|YP_006803938.1| hypothetical protein AMBAS45_14970 [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407292145|gb|AFT96457.1| hypothetical protein AMBAS45_14970 [Alteromonas macleodii str.
'Balearic Sea AD45']
Length = 117
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 40/62 (64%)
Query: 6 TKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVI 65
TKE L D F +FG + ++MD+ SKG+G+V ST+EE KA+ +N K++DG+ I
Sbjct: 13 TKENLEDLFFEFGTIASCDLVMDEASGLSKGFGFVEMSTQEETDKAIEKLNAKVIDGKKI 72
Query: 66 FV 67
V
Sbjct: 73 RV 74
>gi|342870153|gb|EGU73450.1| hypothetical protein FOXB_16088 [Fusarium oxysporum Fo5176]
Length = 474
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 38/58 (65%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVI 65
E+L AFS FG V+EA ++ D RS+GYG+V F EA+KAL+ M+G+ L R I
Sbjct: 188 EVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAI 245
>gi|344304396|gb|EGW34628.1| hypothetical protein SPAPADRAFT_57674 [Spathaspora passalidarum
NRRL Y-27907]
Length = 414
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 42/68 (61%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++ E L F G V A +IM++ +S+GYGYV F ++ A+KAL +M GK +
Sbjct: 182 LSWNIDDEWLKREFEHIGGVIGARVIMERSTGKSRGYGYVDFDNKDSAEKALVEMQGKEI 241
Query: 61 DGRVIFVD 68
DGR I +D
Sbjct: 242 DGRPINLD 249
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+SF+ ++ L + F Q G V I + KG+GYV FS+ +EA+ AL +NG+ +
Sbjct: 283 LSFNAQRDNLFEIFGQHGTVISCRIPTHPDTQQPKGFGYVQFSSVDEAKAALEALNGEYI 342
Query: 61 DGRVIFVDNVRP 72
+GR +D P
Sbjct: 343 EGRACRLDFSAP 354
>gi|291399204|ref|XP_002715240.1| PREDICTED: poly A binding protein, cytoplasmic 4-like [Oryctolagus
cuniculus]
Length = 644
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L D FSQFG+ ++ D +SKG+G+V++ E+A KA+ +MNGK + G+VIFV
Sbjct: 205 ESLKDLFSQFGKTLSVKVMRDP-SGKSKGFGFVSYEKHEDANKAVEEMNGKEIGGKVIFV 263
Query: 68 DNVRPSRRYNTDAPLARQLPQSPEE 92
R ++ A L R+ Q +E
Sbjct: 264 G--RAQKKVERQAELKRKFEQLKQE 286
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 8 EMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFV 67
E L FS FG +T A ++++ G RSKG+G+V FS+ EEA KA+ +MNG+++ + ++V
Sbjct: 308 EKLRKEFSPFGSITSAKVMLEDG--RSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYV 365
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
S + L D FS FG + ++ D+ N SKGY +V F T+E A KA+ MNG LL+ R
Sbjct: 109 SIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDR 166
Query: 64 VIFV 67
+FV
Sbjct: 167 KVFV 170
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%)
Query: 5 TTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRV 64
T+ ML + FS G V + D RS GY YV F +A++AL MN ++ G+
Sbjct: 22 VTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKP 81
Query: 65 IFV 67
I +
Sbjct: 82 IRI 84
>gi|115398367|ref|XP_001214775.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192966|gb|EAU34666.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 701
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 4 STTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGR 63
STT E L + FSQ + A ++D +SKGYG+VTF+ ++A+ AL + NG + +G+
Sbjct: 30 STTTESLTEYFSQSYVIKHALAVLDPETKKSKGYGFVTFADVDDAKAALEEYNGSVFEGK 89
Query: 64 VIFVDNVRPSRRYNTDAPLARQLPQS 89
I VD +P R D L + +P S
Sbjct: 90 KIKVDYAQPRHR-TIDESLGKSVPSS 114
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 10 LADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLLDGRVIFVD 68
LA F FG+V +AT+ G+ G+G+V ++ A+KALA +NGK +DGR + VD
Sbjct: 150 LAVLFRSFGKVKQATLPKKGGQ--LAGFGFVILRGKKNAEKALAAVNGKEVDGRTLAVD 206
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 3 FSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALAD 54
F+ EML + F+QFG + A I++D R +G G+V F E+A + D
Sbjct: 297 FTCDDEMLYEHFTQFGNLRYARIVVDHETERPRGTGFVCFWKAEDAAACVRD 348
>gi|313203177|ref|YP_004041834.1| rnp-1 like RNA-binding protein [Paludibacter propionicigenes WB4]
gi|312442493|gb|ADQ78849.1| RNP-1 like RNA-binding protein [Paludibacter propionicigenes WB4]
Length = 81
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%)
Query: 1 VSFSTTKEMLADAFSQFGQVTEATIIMDKGKNRSKGYGYVTFSTEEEAQKALADMNGKLL 60
+S++ + L +A +++GQV +IMD+ RSKG+ +V S EE A+K +A++NG
Sbjct: 8 LSYNVRENDLQEAIAEYGQVDSCKLIMDRETRRSKGFAFVEMSDEEAAKKVIAELNGAEF 67
Query: 61 DGRVIFVDNVRPSR 74
DGR + V P +
Sbjct: 68 DGRAMVVKEALPKK 81
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.129 0.352
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,416,115,863
Number of Sequences: 23463169
Number of extensions: 50458557
Number of successful extensions: 141623
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 18549
Number of HSP's successfully gapped in prelim test: 3733
Number of HSP's that attempted gapping in prelim test: 105918
Number of HSP's gapped (non-prelim): 36833
length of query: 93
length of database: 8,064,228,071
effective HSP length: 63
effective length of query: 30
effective length of database: 6,586,048,424
effective search space: 197581452720
effective search space used: 197581452720
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 69 (31.2 bits)