Query 048032
Match_columns 93
No_of_seqs 170 out of 1114
Neff 10.1
Searched_HMMs 46136
Date Fri Mar 29 05:37:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048032.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/048032hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1187 Serine/threonine prote 99.1 1.9E-10 4.2E-15 75.0 3.9 41 53-93 61-103 (361)
2 KOG1025 Epidermal growth facto 97.6 4.6E-05 1E-09 54.7 2.3 20 72-91 703-723 (1177)
3 PLN00113 leucine-rich repeat r 97.6 0.00011 2.4E-09 53.3 4.1 37 56-93 682-719 (968)
4 KOG3653 Transforming growth fa 97.6 1.6E-05 3.4E-10 53.6 -0.2 23 70-93 215-237 (534)
5 KOG0196 Tyrosine kinase, EPH ( 97.0 0.00099 2.1E-08 47.9 3.8 34 54-87 607-651 (996)
6 KOG2052 Activin A type IB rece 96.6 0.0057 1.2E-07 41.5 4.9 19 71-89 217-235 (513)
7 cd06624 STKc_ASK Catalytic dom 96.0 0.0033 7.1E-08 38.9 1.3 27 62-88 3-31 (268)
8 PLN03224 probable serine/threo 95.9 0.0054 1.2E-07 42.3 2.0 21 66-86 144-166 (507)
9 PF03109 ABC1: ABC1 family; I 95.6 0.006 1.3E-07 34.1 1.0 26 68-93 13-39 (119)
10 KOG0658 Glycogen synthase kina 95.5 0.0091 2E-07 39.3 1.8 22 72-93 31-53 (364)
11 KOG0193 Serine/threonine prote 95.4 0.01 2.2E-07 41.7 1.9 17 71-87 398-414 (678)
12 TIGR01982 UbiB 2-polyprenylphe 95.4 0.012 2.6E-07 39.8 2.2 22 72-93 124-145 (437)
13 KOG0591 NIMA (never in mitosis 95.2 0.0094 2E-07 38.6 1.1 22 72-93 26-48 (375)
14 KOG0595 Serine/threonine-prote 95.2 0.016 3.4E-07 38.9 2.2 22 72-93 17-39 (429)
15 PLN03225 Serine/threonine-prot 95.1 0.016 3.4E-07 40.5 2.1 23 66-88 131-155 (566)
16 cd05067 PTKc_Lck_Blk Catalytic 95.1 0.013 2.9E-07 36.0 1.7 24 70-93 11-34 (260)
17 cd05144 RIO2_C RIO kinase fami 94.6 0.027 5.9E-07 33.7 2.1 23 71-93 21-43 (198)
18 PHA02882 putative serine/threo 94.5 0.027 5.9E-07 35.6 2.0 18 72-89 19-36 (294)
19 KOG0600 Cdc2-related protein k 94.4 0.019 4.1E-07 39.6 1.1 22 72-93 124-146 (560)
20 cd07879 STKc_p38delta_MAPK13 C 94.3 0.046 1E-06 35.3 2.6 21 72-92 22-43 (342)
21 smart00090 RIO RIO-like kinase 94.2 0.038 8.1E-07 34.4 2.1 23 71-93 34-58 (237)
22 KOG0594 Protein kinase PCTAIRE 94.1 0.038 8.3E-07 36.1 2.0 22 72-93 18-40 (323)
23 cd06639 STKc_myosinIIIB Cataly 94.1 0.018 3.9E-07 36.1 0.4 36 57-92 12-50 (291)
24 cd06638 STKc_myosinIIIA Cataly 94.0 0.028 6.1E-07 35.1 1.2 35 57-91 8-45 (286)
25 cd05064 PTKc_EphR_A10 Catalyti 93.7 0.049 1.1E-06 33.8 1.9 17 70-86 10-26 (266)
26 PRK09188 serine/threonine prot 93.6 0.055 1.2E-06 36.0 2.1 21 72-92 25-47 (365)
27 PF14575 EphA2_TM: Ephrin type 93.6 0.042 9.1E-07 28.4 1.2 20 54-73 54-73 (75)
28 cd05072 PTKc_Lyn Catalytic dom 93.6 0.06 1.3E-06 33.1 2.2 22 71-92 12-33 (261)
29 cd06637 STKc_TNIK Catalytic do 93.6 0.035 7.5E-07 34.3 1.1 21 72-92 13-34 (272)
30 PTZ00284 protein kinase; Provi 93.6 0.03 6.5E-07 37.9 0.8 29 65-93 127-158 (467)
31 cd07877 STKc_p38alpha_MAPK14 C 93.5 0.084 1.8E-06 34.2 2.7 35 59-93 9-46 (345)
32 KOG1035 eIF-2alpha kinase GCN2 93.3 0.047 1E-06 41.3 1.5 26 66-91 478-506 (1351)
33 cd05068 PTKc_Frk_like Catalyti 93.3 0.049 1.1E-06 33.5 1.4 22 71-92 12-33 (261)
34 cd05070 PTKc_Fyn_Yrk Catalytic 93.3 0.072 1.6E-06 32.8 2.1 22 71-92 12-33 (260)
35 cd05103 PTKc_VEGFR2 Catalytic 93.1 0.062 1.3E-06 34.8 1.8 16 70-85 12-27 (343)
36 cd05034 PTKc_Src_like Catalyti 92.9 0.088 1.9E-06 32.3 2.1 22 71-92 12-33 (261)
37 cd05114 PTKc_Tec_Rlk Catalytic 92.8 0.082 1.8E-06 32.5 1.9 21 71-91 10-30 (256)
38 cd06636 STKc_MAP4K4_6 Catalyti 92.8 0.088 1.9E-06 32.8 2.0 35 58-92 7-44 (282)
39 cd05112 PTKc_Itk Catalytic dom 92.7 0.082 1.8E-06 32.4 1.8 22 70-91 9-30 (256)
40 PRK04750 ubiB putative ubiquin 92.5 0.14 3.1E-06 35.8 2.9 22 72-93 126-148 (537)
41 cd05096 PTKc_DDR1 Catalytic do 92.5 0.098 2.1E-06 33.1 1.9 18 71-88 11-28 (304)
42 KOG0663 Protein kinase PITSLRE 92.4 0.069 1.5E-06 35.4 1.2 22 72-93 83-105 (419)
43 KOG4250 TANK binding protein k 92.4 0.073 1.6E-06 38.1 1.4 23 71-93 19-42 (732)
44 cd05043 PTK_Ryk Pseudokinase d 92.4 0.097 2.1E-06 32.6 1.8 18 71-88 12-29 (280)
45 PTZ00036 glycogen synthase kin 92.3 0.11 2.4E-06 35.1 2.1 22 72-93 73-95 (440)
46 cd05108 PTKc_EGFR Catalytic do 92.3 0.099 2.1E-06 33.3 1.8 16 72-87 14-29 (316)
47 cd05102 PTKc_VEGFR3 Catalytic 92.2 0.088 1.9E-06 33.8 1.5 16 71-86 13-28 (338)
48 PTZ00283 serine/threonine prot 92.2 0.11 2.3E-06 35.8 2.0 22 72-93 39-61 (496)
49 cd06616 PKc_MKK4 Catalytic dom 92.2 0.21 4.6E-06 31.2 3.2 21 72-92 11-32 (288)
50 KOG0192 Tyrosine kinase specif 92.2 0.12 2.6E-06 34.3 2.1 19 72-90 48-66 (362)
51 cd05073 PTKc_Hck Catalytic dom 92.1 0.1 2.3E-06 32.1 1.7 21 71-91 12-32 (260)
52 cd05033 PTKc_EphR Catalytic do 92.0 0.12 2.6E-06 31.9 1.9 18 70-87 9-26 (266)
53 cd05071 PTKc_Src Catalytic dom 92.0 0.12 2.6E-06 32.0 1.9 22 71-92 12-33 (262)
54 KOG0201 Serine/threonine prote 91.9 0.11 2.4E-06 35.4 1.7 16 71-86 19-34 (467)
55 cd05104 PTKc_Kit Catalytic dom 91.8 0.13 2.9E-06 33.8 2.0 16 71-86 41-56 (375)
56 KOG4236 Serine/threonine prote 91.6 0.16 3.4E-06 36.0 2.2 26 68-93 566-593 (888)
57 cd05148 PTKc_Srm_Brk Catalytic 91.5 0.13 2.8E-06 31.6 1.7 22 71-92 12-33 (261)
58 KOG1166 Mitotic checkpoint ser 91.3 0.15 3.2E-06 38.0 2.0 22 72-93 705-726 (974)
59 PLN00034 mitogen-activated pro 91.1 0.2 4.3E-06 32.6 2.3 21 72-92 81-102 (353)
60 KOG0605 NDR and related serine 91.1 0.21 4.4E-06 34.8 2.4 22 72-93 148-170 (550)
61 cd07878 STKc_p38beta_MAPK11 Ca 91.0 0.36 7.7E-06 31.2 3.3 21 72-92 22-43 (343)
62 KOG0194 Protein tyrosine kinas 90.8 0.15 3.3E-06 35.1 1.6 17 71-87 163-179 (474)
63 KOG0581 Mitogen-activated prot 90.7 0.37 8E-06 32.1 3.2 21 72-92 86-107 (364)
64 PTZ00263 protein kinase A cata 90.7 0.19 4.1E-06 32.4 1.9 22 71-92 24-46 (329)
65 cd07871 STKc_PCTAIRE3 Catalyti 90.5 0.24 5.3E-06 31.1 2.2 22 71-92 11-33 (288)
66 cd05090 PTKc_Ror1 Catalytic do 90.4 0.21 4.6E-06 31.1 1.9 17 70-86 10-26 (283)
67 cd05113 PTKc_Btk_Bmx Catalytic 90.3 0.2 4.3E-06 30.9 1.7 21 70-90 9-29 (256)
68 cd05069 PTKc_Yes Catalytic dom 90.2 0.25 5.4E-06 30.4 2.1 22 70-91 11-32 (260)
69 PHA02988 hypothetical protein; 90.2 0.22 4.8E-06 31.4 1.9 35 54-92 12-46 (283)
70 cd06646 STKc_MAP4K5 Catalytic 90.0 0.3 6.6E-06 30.1 2.4 21 72-92 16-37 (267)
71 cd05054 PTKc_VEGFR Catalytic d 90.0 0.2 4.2E-06 32.5 1.5 16 71-86 13-28 (337)
72 cd05059 PTKc_Tec_like Catalyti 90.0 0.23 5.1E-06 30.5 1.8 20 70-89 9-28 (256)
73 COG0661 AarF Predicted unusual 89.9 0.18 3.8E-06 35.2 1.3 26 68-93 127-153 (517)
74 cd05109 PTKc_HER2 Catalytic do 89.8 0.28 6.1E-06 30.5 2.1 20 71-90 13-33 (279)
75 cd05622 STKc_ROCK1 Catalytic d 89.8 0.2 4.4E-06 33.0 1.5 16 72-87 50-65 (371)
76 cd06641 STKc_MST3 Catalytic do 89.7 0.3 6.4E-06 30.4 2.1 23 70-92 9-32 (277)
77 cd07864 STKc_CDK12 Catalytic d 89.6 0.38 8.2E-06 30.2 2.6 21 72-92 14-35 (302)
78 cd05111 PTK_HER3 Pseudokinase 89.6 0.28 6.1E-06 30.6 2.0 16 71-86 13-28 (279)
79 cd05039 PTKc_Csk_like Catalyti 89.5 0.28 6E-06 30.1 1.9 19 70-88 11-29 (256)
80 cd07872 STKc_PCTAIRE2 Catalyti 89.3 0.34 7.4E-06 30.7 2.2 16 72-87 13-28 (309)
81 cd05063 PTKc_EphR_A2 Catalytic 89.2 0.28 6E-06 30.3 1.7 17 71-87 11-27 (268)
82 cd05621 STKc_ROCK2 Catalytic d 89.2 0.22 4.9E-06 32.8 1.3 21 72-92 50-71 (370)
83 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 89.0 0.37 8.1E-06 30.0 2.2 17 70-86 9-25 (284)
84 KOG0577 Serine/threonine prote 89.0 0.29 6.4E-06 35.1 1.8 22 72-93 33-55 (948)
85 PRK09605 bifunctional UGMP fam 88.9 0.34 7.4E-06 33.6 2.1 20 71-90 339-358 (535)
86 cd05088 PTKc_Tie2 Catalytic do 88.8 0.31 6.8E-06 30.9 1.8 18 70-87 12-29 (303)
87 cd07869 STKc_PFTAIRE1 Catalyti 88.6 0.37 8.1E-06 30.5 2.0 22 71-92 11-33 (303)
88 cd05105 PTKc_PDGFR_alpha Catal 88.6 0.3 6.6E-06 32.6 1.7 16 71-86 43-58 (400)
89 cd06620 PKc_MAPKK_Byr1_like Ca 88.5 0.45 9.7E-06 29.7 2.3 22 71-92 11-33 (284)
90 cd05596 STKc_ROCK Catalytic do 88.5 0.18 3.9E-06 33.2 0.5 21 72-92 50-71 (370)
91 KOG0575 Polo-like serine/threo 88.4 0.42 9.1E-06 33.7 2.3 22 72-93 25-47 (592)
92 cd07870 STKc_PFTAIRE2 Catalyti 88.4 0.33 7.2E-06 30.4 1.7 20 72-91 12-32 (291)
93 cd07856 STKc_Sty1_Hog1 Catalyt 88.3 0.24 5.2E-06 31.9 1.1 31 62-92 5-38 (328)
94 cd05091 PTKc_Ror2 Catalytic do 88.2 0.42 9.2E-06 29.7 2.1 17 71-87 11-27 (283)
95 cd05106 PTKc_CSF-1R Catalytic 88.1 0.37 8E-06 31.8 1.8 16 71-86 44-59 (374)
96 cd06649 PKc_MEK2 Catalytic dom 88.1 0.5 1.1E-05 30.4 2.4 21 72-92 12-33 (331)
97 KOG1095 Protein tyrosine kinas 87.9 0.31 6.8E-06 36.6 1.5 17 71-87 698-714 (1025)
98 KOG0661 MAPK related serine/th 87.8 0.46 1E-05 32.9 2.1 22 72-93 17-39 (538)
99 cd07845 STKc_CDK10 Catalytic d 87.7 0.49 1.1E-05 30.0 2.2 21 72-92 14-35 (309)
100 cd06657 STKc_PAK4 Catalytic do 87.6 0.59 1.3E-05 29.6 2.5 21 72-92 27-48 (292)
101 cd06618 PKc_MKK7 Catalytic dom 87.6 0.53 1.2E-05 29.6 2.3 22 71-92 21-43 (296)
102 cd06642 STKc_STK25-YSK1 Cataly 87.5 0.58 1.3E-05 29.1 2.4 22 71-92 10-32 (277)
103 cd05049 PTKc_Trk Catalytic dom 87.4 0.4 8.6E-06 29.7 1.6 18 71-88 11-28 (280)
104 cd07876 STKc_JNK2 Catalytic do 87.2 0.59 1.3E-05 30.4 2.3 21 72-92 28-49 (359)
105 cd07873 STKc_PCTAIRE1 Catalyti 87.0 0.59 1.3E-05 29.5 2.3 21 72-92 13-34 (301)
106 cd05065 PTKc_EphR_B Catalytic 87.0 0.47 1E-05 29.3 1.8 18 70-87 9-26 (269)
107 PTZ00024 cyclin-dependent prot 86.9 0.61 1.3E-05 29.9 2.3 21 72-92 16-37 (335)
108 cd07844 STKc_PCTAIRE_like Cata 86.7 0.6 1.3E-05 29.2 2.1 22 71-92 11-33 (291)
109 cd06650 PKc_MEK1 Catalytic dom 86.7 0.71 1.5E-05 29.8 2.5 20 72-91 12-32 (333)
110 cd07880 STKc_p38gamma_MAPK12 C 86.5 0.63 1.4E-05 30.1 2.2 21 72-92 22-43 (343)
111 PHA03209 serine/threonine kina 86.5 0.67 1.5E-05 30.3 2.3 17 72-88 73-89 (357)
112 cd05057 PTKc_EGFR_like Catalyt 86.5 0.52 1.1E-05 29.3 1.8 17 71-87 13-29 (279)
113 cd05107 PTKc_PDGFR_beta Cataly 86.4 0.58 1.3E-05 31.4 2.1 17 71-87 43-59 (401)
114 KOG0198 MEKK and related serin 86.3 0.67 1.5E-05 30.4 2.2 20 71-90 23-43 (313)
115 cd06645 STKc_MAP4K3 Catalytic 86.2 0.69 1.5E-05 28.5 2.2 22 71-92 15-37 (267)
116 PF15102 TMEM154: TMEM154 prot 86.0 0.92 2E-05 26.4 2.4 6 57-62 125-130 (146)
117 cd07849 STKc_ERK1_2_like Catal 86.0 0.58 1.3E-05 30.1 1.9 21 72-92 12-33 (336)
118 KOG0032 Ca2+/calmodulin-depend 85.9 0.69 1.5E-05 31.1 2.2 23 71-93 41-64 (382)
119 cd06644 STKc_STK10_LOK Catalyt 85.9 0.81 1.8E-05 28.7 2.4 20 72-91 19-39 (292)
120 cd05038 PTKc_Jak_rpt2 Catalyti 85.9 0.66 1.4E-05 28.7 2.0 17 71-87 10-26 (284)
121 cd07851 STKc_p38 Catalytic dom 85.9 0.59 1.3E-05 30.2 1.9 21 72-92 22-43 (343)
122 KOG1164 Casein kinase (serine/ 85.6 0.57 1.2E-05 30.3 1.7 16 72-87 25-40 (322)
123 cd07852 STKc_MAPK15 Catalytic 85.6 0.81 1.8E-05 29.4 2.4 22 71-92 13-35 (337)
124 KOG1163 Casein kinase (serine/ 85.5 0.55 1.2E-05 30.2 1.5 22 72-93 22-44 (341)
125 PHA03210 serine/threonine kina 85.4 0.59 1.3E-05 32.2 1.7 15 72-86 155-169 (501)
126 PTZ00426 cAMP-dependent protei 85.3 0.64 1.4E-05 30.2 1.8 17 71-87 36-52 (340)
127 cd05048 PTKc_Ror Catalytic Dom 85.3 0.68 1.5E-05 28.8 1.9 17 71-87 11-27 (283)
128 cd06656 STKc_PAK3 Catalytic do 85.1 0.78 1.7E-05 29.0 2.1 21 72-92 26-47 (297)
129 cd06607 STKc_TAO Catalytic dom 85.1 0.9 2E-05 28.8 2.4 21 72-92 22-43 (307)
130 cd05082 PTKc_Csk Catalytic dom 84.9 0.88 1.9E-05 27.9 2.2 18 71-88 12-29 (256)
131 cd05052 PTKc_Abl Catalytic dom 84.9 0.77 1.7E-05 28.3 2.0 17 71-87 12-28 (263)
132 cd05110 PTKc_HER4 Catalytic do 84.9 0.7 1.5E-05 29.3 1.8 15 72-86 14-28 (303)
133 cd05036 PTKc_ALK_LTK Catalytic 84.8 0.61 1.3E-05 29.0 1.5 17 72-88 13-29 (277)
134 cd07854 STKc_MAPK4_6 Catalytic 84.6 0.96 2.1E-05 29.3 2.4 22 71-92 11-33 (342)
135 cd07843 STKc_CDC2L1 Catalytic 84.5 0.91 2E-05 28.4 2.2 21 72-92 12-33 (293)
136 KOG0580 Serine/threonine prote 84.4 0.8 1.7E-05 29.2 1.8 17 72-88 29-45 (281)
137 KOG1006 Mitogen-activated prot 84.4 0.43 9.3E-06 31.0 0.7 20 72-91 71-91 (361)
138 cd05046 PTK_CCK4 Pseudokinase 84.3 0.8 1.7E-05 28.3 1.9 16 72-87 12-27 (275)
139 KOG1026 Nerve growth factor re 84.3 0.43 9.4E-06 34.8 0.7 20 69-88 490-509 (774)
140 PHA03212 serine/threonine kina 84.2 0.99 2.1E-05 30.1 2.3 21 72-92 99-120 (391)
141 KOG0574 STE20-like serine/thre 84.1 0.12 2.6E-06 34.1 -1.9 22 72-93 40-62 (502)
142 cd05061 PTKc_InsR Catalytic do 84.0 0.81 1.8E-05 28.7 1.8 16 71-86 12-27 (288)
143 cd06643 STKc_SLK Catalytic dom 84.0 1.2 2.6E-05 27.7 2.5 18 71-88 11-28 (282)
144 cd07865 STKc_CDK9 Catalytic do 83.9 1.1 2.3E-05 28.2 2.3 21 72-92 19-40 (310)
145 cd05050 PTKc_Musk Catalytic do 83.8 0.82 1.8E-05 28.6 1.8 16 72-87 12-27 (288)
146 cd05051 PTKc_DDR Catalytic dom 83.7 0.86 1.9E-05 28.5 1.8 18 71-88 11-28 (296)
147 cd06635 STKc_TAO1 Catalytic do 83.7 1.1 2.5E-05 28.5 2.4 21 72-92 32-53 (317)
148 cd05032 PTKc_InsR_like Catalyt 83.2 0.95 2.1E-05 28.0 1.9 17 71-87 12-28 (277)
149 cd05079 PTKc_Jak1_rpt2 Catalyt 83.2 1.1 2.3E-05 28.1 2.1 16 71-86 10-25 (284)
150 cd05062 PTKc_IGF-1R Catalytic 83.1 0.77 1.7E-05 28.5 1.4 15 72-86 13-27 (277)
151 KOG1235 Predicted unusual prot 83.1 0.98 2.1E-05 31.8 2.0 26 68-93 163-189 (538)
152 KOG0694 Serine/threonine prote 83.0 1 2.2E-05 32.5 2.0 16 72-87 375-390 (694)
153 cd05056 PTKc_FAK Catalytic dom 82.9 1 2.2E-05 27.8 1.9 19 70-88 11-29 (270)
154 cd07874 STKc_JNK3 Catalytic do 82.9 1.1 2.4E-05 29.1 2.1 15 72-86 24-38 (355)
155 cd06640 STKc_MST4 Catalytic do 82.9 1.4 3E-05 27.4 2.5 22 71-92 10-32 (277)
156 KOG0197 Tyrosine kinases [Sign 82.8 0.98 2.1E-05 31.2 1.9 22 71-92 212-233 (468)
157 cd06659 STKc_PAK6 Catalytic do 82.6 1.3 2.8E-05 28.0 2.3 21 72-92 28-49 (297)
158 cd06633 STKc_TAO3 Catalytic do 82.5 1.3 2.9E-05 28.2 2.4 20 72-91 28-48 (313)
159 cd05610 STKc_MASTL Catalytic d 82.5 1.2 2.5E-05 32.0 2.3 22 71-92 10-32 (669)
160 cd06612 STKc_MST1_2 Catalytic 82.2 1.4 3E-05 26.8 2.3 18 71-88 9-26 (256)
161 cd05097 PTKc_DDR_like Catalyti 82.1 0.85 1.8E-05 28.7 1.4 17 71-87 11-27 (295)
162 cd07875 STKc_JNK1 Catalytic do 82.1 1.3 2.8E-05 28.9 2.3 15 72-86 31-45 (364)
163 cd07866 STKc_BUR1 Catalytic do 82.0 1.4 3E-05 27.7 2.3 20 72-91 15-35 (311)
164 cd05092 PTKc_TrkA Catalytic do 81.9 1.1 2.4E-05 27.9 1.8 17 70-86 10-26 (280)
165 cd06654 STKc_PAK1 Catalytic do 81.8 1.3 2.9E-05 27.9 2.2 21 72-92 27-48 (296)
166 PHA03211 serine/threonine kina 81.7 1.4 3E-05 30.3 2.3 17 72-88 176-192 (461)
167 KOG0598 Ribosomal protein S6 k 81.5 0.92 2E-05 30.2 1.3 16 72-87 32-47 (357)
168 cd07858 STKc_TEY_MAPK_plant Ca 81.2 1.5 3.2E-05 28.3 2.2 21 72-92 12-33 (337)
169 PF09919 DUF2149: Uncharacteri 81.1 1.5 3.2E-05 23.6 1.8 17 74-92 71-88 (92)
170 PTZ00370 STEVOR; Provisional 80.2 0.84 1.8E-05 29.5 0.8 9 13-21 274-282 (296)
171 cd06647 STKc_PAK_I Catalytic d 80.1 1.6 3.5E-05 27.5 2.1 21 71-91 25-46 (293)
172 KOG0667 Dual-specificity tyros 80.0 1.4 2.9E-05 31.4 1.8 22 72-93 193-215 (586)
173 KOG0199 ACK and related non-re 80.0 1.1 2.5E-05 32.9 1.5 22 70-91 115-138 (1039)
174 cd05083 PTKc_Chk Catalytic dom 80.0 1.2 2.7E-05 27.2 1.5 18 71-88 12-29 (254)
175 cd06614 STKc_PAK Catalytic dom 79.8 1.4 3E-05 27.5 1.8 20 72-91 26-46 (286)
176 cd05098 PTKc_FGFR1 Catalytic d 79.8 1.3 2.8E-05 28.1 1.6 16 71-86 24-39 (307)
177 KOG4257 Focal adhesion tyrosin 79.5 1.1 2.3E-05 32.7 1.2 17 70-86 394-410 (974)
178 cd06658 STKc_PAK5 Catalytic do 79.4 2 4.4E-05 27.1 2.4 21 72-92 29-50 (292)
179 cd06611 STKc_SLK_like Catalyti 79.2 1.9 4.1E-05 26.8 2.2 22 71-92 11-33 (280)
180 PTZ00370 STEVOR; Provisional 79.1 0.77 1.7E-05 29.7 0.4 26 3-28 261-286 (296)
181 PF02009 Rifin_STEVOR: Rifin/s 79.1 0.7 1.5E-05 30.1 0.2 8 12-19 273-280 (299)
182 cd07855 STKc_ERK5 Catalytic do 78.8 1.9 4.2E-05 27.7 2.2 22 71-92 11-33 (334)
183 KOG0666 Cyclin C-dependent kin 78.5 1.6 3.4E-05 29.2 1.7 16 72-87 31-46 (438)
184 cd05095 PTKc_DDR2 Catalytic do 78.5 1.1 2.5E-05 28.1 1.1 15 71-85 11-25 (296)
185 KOG1024 Receptor-like protein 78.4 2.7 5.9E-05 29.0 2.8 17 72-88 291-307 (563)
186 cd07850 STKc_JNK Catalytic dom 78.1 2.2 4.8E-05 27.7 2.3 21 72-92 23-44 (353)
187 cd05053 PTKc_FGFR Catalytic do 77.9 1.6 3.4E-05 27.3 1.6 16 72-87 19-34 (293)
188 PF05568 ASFV_J13L: African sw 77.1 1.3 2.8E-05 25.9 0.9 15 9-23 44-58 (189)
189 cd05093 PTKc_TrkB Catalytic do 77.1 2.2 4.7E-05 26.8 2.0 16 71-86 11-26 (288)
190 PHA03390 pk1 serine/threonine- 77.0 4.5 9.7E-05 25.1 3.4 15 73-87 24-38 (267)
191 KOG0584 Serine/threonine prote 76.9 0.99 2.1E-05 32.2 0.5 25 69-93 44-69 (632)
192 cd06634 STKc_TAO2 Catalytic do 76.6 2.5 5.4E-05 26.9 2.2 20 72-91 22-42 (308)
193 cd06608 STKc_myosinIII_like Ca 76.4 1.4 3.1E-05 27.0 1.1 16 72-87 13-28 (275)
194 KOG0986 G protein-coupled rece 76.0 1.8 3.9E-05 30.2 1.5 20 68-87 186-207 (591)
195 cd06648 STKc_PAK_II Catalytic 75.9 2.5 5.5E-05 26.5 2.1 20 72-91 26-46 (285)
196 cd05101 PTKc_FGFR2 Catalytic d 75.9 1.8 4E-05 27.3 1.5 16 71-86 21-36 (304)
197 KOG4258 Insulin/growth factor 75.1 7.2 0.00016 29.4 4.3 15 72-86 1001-1015(1025)
198 cd06655 STKc_PAK2 Catalytic do 74.8 3 6.5E-05 26.4 2.2 21 72-92 26-47 (296)
199 cd05066 PTKc_EphR_A Catalytic 74.5 2.3 5.1E-05 26.2 1.7 17 70-86 9-25 (267)
200 cd05055 PTKc_PDGFR Catalytic d 74.4 2.1 4.6E-05 27.1 1.5 16 71-86 41-56 (302)
201 KOG1989 ARK protein kinase fam 74.2 2.9 6.3E-05 30.7 2.2 18 72-89 44-61 (738)
202 cd05080 PTKc_Tyk2_rpt2 Catalyt 74.1 2 4.4E-05 26.7 1.3 16 70-85 9-24 (283)
203 PF05454 DAG1: Dystroglycan (D 73.8 1.1 2.3E-05 29.2 0.0 12 12-23 164-175 (290)
204 KOG0592 3-phosphoinositide-dep 73.7 2.2 4.7E-05 30.3 1.5 18 69-86 77-94 (604)
205 KOG1167 Serine/threonine prote 73.4 0.9 2E-05 30.8 -0.4 16 72-87 43-58 (418)
206 cd05100 PTKc_FGFR3 Catalytic d 73.2 2.3 5E-05 27.3 1.5 16 71-86 18-33 (334)
207 PF14991 MLANA: Protein melan- 73.2 1.1 2.5E-05 24.9 0.1 7 15-21 44-50 (118)
208 cd05099 PTKc_FGFR4 Catalytic d 73.0 2.4 5.1E-05 27.0 1.5 16 71-86 18-33 (314)
209 KOG0583 Serine/threonine prote 72.7 3.3 7.2E-05 27.7 2.1 22 72-93 24-46 (370)
210 PF07204 Orthoreo_P10: Orthore 71.4 2.8 6.1E-05 22.6 1.3 10 9-18 56-65 (98)
211 PHA03207 serine/threonine kina 70.4 4 8.7E-05 27.1 2.1 15 72-86 99-113 (392)
212 PF11770 GAPT: GRB2-binding ad 69.4 4.2 9.2E-05 23.9 1.8 17 3-19 16-32 (158)
213 cd05094 PTKc_TrkC Catalytic do 68.4 3.5 7.6E-05 25.8 1.5 16 71-86 11-26 (291)
214 PTZ00266 NIMA-related protein 68.1 5 0.00011 30.6 2.4 16 72-87 20-35 (1021)
215 cd06613 STKc_MAP4K3_like Catal 67.0 5.3 0.00011 24.3 2.1 17 71-87 9-25 (262)
216 PTZ00046 rifin; Provisional 66.1 3.2 6.9E-05 27.8 1.0 9 11-19 331-339 (358)
217 KOG0582 Ste20-like serine/thre 63.6 4.8 0.0001 28.1 1.4 24 70-93 31-55 (516)
218 TIGR01477 RIFIN variant surfac 63.1 3.9 8.5E-05 27.4 1.0 8 12-19 327-334 (353)
219 KOG1094 Discoidin domain recep 61.4 7.6 0.00016 28.3 2.1 25 69-93 542-566 (807)
220 KOG1165 Casein kinase (serine/ 61.2 5.2 0.00011 27.1 1.3 22 72-93 35-57 (449)
221 KOG0660 Mitogen-activated prot 61.0 8.9 0.00019 25.8 2.3 22 72-93 29-51 (359)
222 KOG0579 Ste20-like serine/thre 58.3 2.1 4.6E-05 31.4 -0.9 16 72-87 39-54 (1187)
223 PTZ00267 NIMA-related protein 57.9 6.2 0.00013 27.1 1.3 16 71-86 73-88 (478)
224 COG2112 Predicted Ser/Thr prot 57.2 9.5 0.00021 23.5 1.8 19 72-90 29-47 (201)
225 KOG1236 Predicted unusual prot 56.3 2.6 5.6E-05 29.4 -0.7 24 63-86 186-210 (565)
226 KOG4279 Serine/threonine prote 55.1 9.3 0.0002 28.7 1.8 16 72-87 582-597 (1226)
227 KOG0596 Dual specificity; seri 53.5 9.6 0.00021 27.5 1.6 20 72-91 368-387 (677)
228 COG0478 RIO-like serine/threon 52.7 12 0.00027 24.5 1.9 24 70-93 96-119 (304)
229 KOG0200 Fibroblast/platelet-de 50.7 10 0.00022 27.1 1.4 18 70-87 301-318 (609)
230 KOG1151 Tousled-like protein k 50.6 2.2 4.7E-05 30.0 -1.8 14 72-85 470-483 (775)
231 PF15050 SCIMP: SCIMP protein 50.5 15 0.00033 20.8 1.8 7 13-19 26-32 (133)
232 KOG0610 Putative serine/threon 48.1 17 0.00038 25.2 2.1 17 72-88 84-100 (459)
233 PF05084 GRA6: Granule antigen 47.7 13 0.00028 22.3 1.3 21 1-21 154-174 (215)
234 KOG0664 Nemo-like MAPK-related 46.3 13 0.00029 24.6 1.3 21 72-92 60-81 (449)
235 KOG0696 Serine/threonine prote 45.6 11 0.00025 26.4 1.0 26 61-86 344-370 (683)
236 PF13095 FTA2: Kinetochore Sim 45.0 24 0.00053 21.9 2.3 21 69-89 41-62 (207)
237 KOG4721 Serine/threonine prote 44.5 16 0.00034 26.8 1.6 19 72-90 131-149 (904)
238 PRK01723 3-deoxy-D-manno-octul 44.1 26 0.00056 21.8 2.4 20 72-91 38-58 (239)
239 KOG0616 cAMP-dependent protein 43.7 53 0.0011 22.1 3.7 16 72-87 51-66 (355)
240 cd03690 Tet_II Tet_II: This su 43.5 13 0.00029 19.2 0.9 21 72-92 16-36 (85)
241 KOG0578 p21-activated serine/t 39.4 23 0.0005 25.3 1.7 22 72-93 280-302 (550)
242 PF10577 UPF0560: Uncharacteri 39.2 27 0.00059 26.1 2.1 15 7-21 286-300 (807)
243 PRK11486 flagellar biosynthesi 38.2 20 0.00044 20.4 1.1 17 5-21 26-42 (124)
244 KOG0669 Cyclin T-dependent kin 36.3 3.3 7.2E-05 27.0 -2.4 17 72-88 24-40 (376)
245 TIGR01624 LRP1_Cterm LRP1 C-te 36.0 30 0.00066 16.3 1.3 13 72-88 35-47 (50)
246 cd04088 EFG_mtEFG_II EFG_mtEFG 35.7 24 0.00052 17.9 1.1 21 72-92 13-33 (83)
247 KOG0607 MAP kinase-interacting 35.4 31 0.00067 23.5 1.8 24 58-84 74-97 (463)
248 KOG1027 Serine/threonine prote 35.2 30 0.00066 26.2 1.9 21 72-93 516-537 (903)
249 cd04090 eEF2_II_snRNP Loc2 eEF 35.1 27 0.00058 18.4 1.3 16 77-92 19-34 (94)
250 KOG0984 Mitogen-activated prot 34.5 22 0.00047 22.7 0.9 21 72-92 53-74 (282)
251 cd04092 mtEFG2_II_like mtEFG2_ 33.6 29 0.00063 17.6 1.2 21 72-92 13-33 (83)
252 PF13974 YebO: YebO-like prote 32.9 23 0.0005 18.6 0.7 9 6-14 6-14 (80)
253 PF05142 DUF702: Domain of unk 32.9 29 0.00063 20.5 1.2 13 72-88 136-148 (154)
254 KOG3482 Small nuclear ribonucl 32.4 31 0.00068 17.7 1.1 15 72-86 21-35 (79)
255 cd03700 eEF2_snRNP_like_II EF2 31.3 33 0.00071 18.0 1.2 19 74-92 16-34 (93)
256 PF14531 Kinase-like: Kinase-l 31.0 44 0.00096 21.8 2.0 21 72-92 19-40 (288)
257 KOG2345 Serine/threonine prote 31.0 31 0.00068 22.5 1.2 14 72-85 28-41 (302)
258 KOG0615 Serine/threonine prote 31.0 49 0.0011 23.1 2.2 22 72-93 179-201 (475)
259 KOG0983 Mitogen-activated prot 30.5 80 0.0017 21.2 3.0 17 72-88 99-115 (391)
260 PF15345 TMEM51: Transmembrane 30.5 51 0.0011 21.0 2.1 7 58-64 126-132 (233)
261 KOG0612 Rho-associated, coiled 30.3 37 0.00079 26.9 1.6 17 72-88 82-98 (1317)
262 cd03699 lepA_II lepA_II: This 29.5 34 0.00074 17.6 1.1 21 72-92 13-33 (86)
263 PRK15449 ferredoxin-like prote 29.3 33 0.00072 18.6 1.0 11 73-83 83-93 (95)
264 PRK10359 lipopolysaccharide co 29.3 62 0.0014 20.4 2.4 16 72-87 38-53 (232)
265 PHA03286 envelope glycoprotein 29.1 29 0.00064 24.3 0.9 11 80-90 472-482 (492)
266 PF15176 LRR19-TM: Leucine-ric 28.3 33 0.00072 18.8 0.9 11 5-15 25-35 (102)
267 KOG4158 BRPK/PTEN-induced prot 28.2 17 0.00037 25.4 -0.2 28 56-88 153-180 (598)
268 PF11395 DUF2873: Protein of u 27.9 54 0.0012 14.5 1.4 9 10-18 23-31 (43)
269 PRK10905 cell division protein 27.6 53 0.0011 22.0 1.9 9 2-10 3-11 (328)
270 PF07423 DUF1510: Protein of u 26.3 66 0.0014 20.2 2.0 21 58-78 151-180 (217)
271 PRK11901 hypothetical protein; 25.9 50 0.0011 22.1 1.5 10 2-11 41-50 (327)
272 COG1504 Uncharacterized conser 25.0 1.1E+02 0.0023 17.3 2.5 30 53-82 45-76 (121)
273 cd03689 RF3_II RF3_II: this su 24.2 42 0.00092 17.3 0.9 20 73-92 15-34 (85)
274 COG3761 NADH:ubiquinone oxidor 23.8 34 0.00073 18.9 0.4 15 69-83 12-26 (118)
275 COG3190 FliO Flagellar biogene 23.6 50 0.0011 19.2 1.1 18 4-21 31-48 (137)
276 KOG0587 Traf2- and Nck-interac 22.8 61 0.0013 24.9 1.6 21 70-90 24-45 (953)
277 PHA03240 envelope glycoprotein 22.3 65 0.0014 20.4 1.5 7 12-18 225-231 (258)
278 PRK14051 negative regulator Gr 22.2 67 0.0014 18.0 1.3 18 72-89 30-47 (123)
279 PF15569 Imm21: Immunity prote 22.0 1.5E+02 0.0032 16.0 2.6 24 56-83 11-38 (91)
280 KOG0611 Predicted serine/threo 21.3 53 0.0011 23.2 1.0 24 70-93 58-82 (668)
281 KOG0033 Ca2+/calmodulin-depend 21.2 13 0.00028 24.3 -1.7 15 71-85 17-31 (355)
282 KOG4645 MAPKKK (MAP kinase kin 21.1 70 0.0015 25.9 1.7 19 72-90 1242-1261(1509)
No 1
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.05 E-value=1.9e-10 Score=75.02 Aligned_cols=41 Identities=46% Similarity=0.929 Sum_probs=37.1
Q ss_pred CCceechHHHHHHhcchhc--cccccCceeeeEEEeCCCeeeC
Q 048032 53 APKRYSFPNVKKMTNSFKD--ELGQGGYGRVYKGKLSDGRLVA 93 (93)
Q Consensus 53 ~~~~~~~~~l~~at~~f~~--~iG~G~~g~VYk~~l~~g~~va 93 (93)
..+.|++.+|.+||++|++ .||+|+||.||||.+++|..||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vA 103 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVA 103 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEE
Confidence 5677999999999999996 8999999999999999987664
No 2
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=97.58 E-value=4.6e-05 Score=54.71 Aligned_cols=20 Identities=45% Similarity=0.880 Sum_probs=17.3
Q ss_pred cccccCceeeeEEEe-CCCee
Q 048032 72 ELGQGGYGRVYKGKL-SDGRL 91 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l-~~g~~ 91 (93)
+||+|.||+||||.+ |.|+.
T Consensus 703 vLGsgAfGtV~kGiw~Pege~ 723 (1177)
T KOG1025|consen 703 VLGSGAFGTVYKGIWIPEGEN 723 (1177)
T ss_pred eeccccceeEEeeeEecCCce
Confidence 899999999999987 66654
No 3
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=97.56 E-value=0.00011 Score=53.29 Aligned_cols=37 Identities=19% Similarity=0.338 Sum_probs=24.4
Q ss_pred eechHHHHHHhcchhccccccCceeeeEEEe-CCCeeeC
Q 048032 56 RYSFPNVKKMTNSFKDELGQGGYGRVYKGKL-SDGRLVA 93 (93)
Q Consensus 56 ~~~~~~l~~at~~f~~~iG~G~~g~VYk~~l-~~g~~va 93 (93)
.++++++..... ..++||+|+||.||+|.. .+|..||
T Consensus 682 ~~~~~~~~~~~~-~~~~ig~G~~g~Vy~~~~~~~~~~va 719 (968)
T PLN00113 682 SITINDILSSLK-EENVISRGKKGASYKGKSIKNGMQFV 719 (968)
T ss_pred hhhHHHHHhhCC-cccEEccCCCeeEEEEEECCCCcEEE
Confidence 355566554432 122799999999999987 4565543
No 4
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=97.55 E-value=1.6e-05 Score=53.60 Aligned_cols=23 Identities=43% Similarity=0.836 Sum_probs=18.7
Q ss_pred hccccccCceeeeEEEeCCCeeeC
Q 048032 70 KDELGQGGYGRVYKGKLSDGRLVA 93 (93)
Q Consensus 70 ~~~iG~G~~g~VYk~~l~~g~~va 93 (93)
.++||+|+||.||||.|.+ +.||
T Consensus 215 ~eli~~Grfg~V~KaqL~~-~~VA 237 (534)
T KOG3653|consen 215 LELIGRGRFGCVWKAQLDN-RLVA 237 (534)
T ss_pred HHHhhcCccceeehhhccC-ceeE
Confidence 4489999999999999965 4444
No 5
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=97.01 E-value=0.00099 Score=47.87 Aligned_cols=34 Identities=21% Similarity=0.512 Sum_probs=27.1
Q ss_pred CceechHHHHHHhcchhc-----------cccccCceeeeEEEeC
Q 048032 54 PKRYSFPNVKKMTNSFKD-----------ELGQGGYGRVYKGKLS 87 (93)
Q Consensus 54 ~~~~~~~~l~~at~~f~~-----------~iG~G~~g~VYk~~l~ 87 (93)
...++|+|-.+|...|+. +||.|.||.||+|.|.
T Consensus 607 iDP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk 651 (996)
T KOG0196|consen 607 IDPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLK 651 (996)
T ss_pred cCCccccCccHHHHHhhhhcChhheEEEEEEecccccceeccccc
Confidence 345788888788777742 5999999999999983
No 6
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=96.63 E-value=0.0057 Score=41.49 Aligned_cols=19 Identities=26% Similarity=0.816 Sum_probs=16.2
Q ss_pred ccccccCceeeeEEEeCCC
Q 048032 71 DELGQGGYGRVYKGKLSDG 89 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~~g 89 (93)
+.||+|.||.|.+|.+.+.
T Consensus 217 e~IGkGRyGEVwrG~wrGe 235 (513)
T KOG2052|consen 217 EIIGKGRFGEVWRGRWRGE 235 (513)
T ss_pred EEecCccccceeeccccCC
Confidence 4699999999999999543
No 7
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=96.02 E-value=0.0033 Score=38.93 Aligned_cols=27 Identities=26% Similarity=0.385 Sum_probs=21.2
Q ss_pred HHHHhcchhc--cccccCceeeeEEEeCC
Q 048032 62 VKKMTNSFKD--ELGQGGYGRVYKGKLSD 88 (93)
Q Consensus 62 l~~at~~f~~--~iG~G~~g~VYk~~l~~ 88 (93)
++.+++++.. .||+|+||.||+|...+
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~ 31 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLS 31 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecC
Confidence 4556677665 79999999999998653
No 8
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=95.91 E-value=0.0054 Score=42.28 Aligned_cols=21 Identities=29% Similarity=0.705 Sum_probs=16.9
Q ss_pred hcchhc--cccccCceeeeEEEe
Q 048032 66 TNSFKD--ELGQGGYGRVYKGKL 86 (93)
Q Consensus 66 t~~f~~--~iG~G~~g~VYk~~l 86 (93)
.++|.. .||+|+||.||+|.+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~ 166 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLR 166 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEe
Confidence 345654 799999999999975
No 9
>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.
Probab=95.55 E-value=0.006 Score=34.14 Aligned_cols=26 Identities=31% Similarity=0.505 Sum_probs=22.0
Q ss_pred chhc-cccccCceeeeEEEeCCCeeeC
Q 048032 68 SFKD-ELGQGGYGRVYKGKLSDGRLVA 93 (93)
Q Consensus 68 ~f~~-~iG~G~~g~VYk~~l~~g~~va 93 (93)
.|.+ .|+.++.|.||+|.|.+|+.||
T Consensus 13 ~fd~~PlasASiaQVh~a~l~~g~~Va 39 (119)
T PF03109_consen 13 EFDPEPLASASIAQVHRARLKDGEEVA 39 (119)
T ss_pred HCCcchhhheehhhheeeeecccchhh
Confidence 3555 7999999999999999998765
No 10
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=95.51 E-value=0.0091 Score=39.32 Aligned_cols=22 Identities=41% Similarity=0.702 Sum_probs=17.7
Q ss_pred cccccCceeeeEEEeC-CCeeeC
Q 048032 72 ELGQGGYGRVYKGKLS-DGRLVA 93 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~-~g~~va 93 (93)
++|.|+||.||+|.+. .++.||
T Consensus 31 liG~GsFg~Vyq~~~~e~~~~vA 53 (364)
T KOG0658|consen 31 LIGSGSFGVVYQAKLRETEEEVA 53 (364)
T ss_pred EEeecccceEEEEEEcCCCceeE
Confidence 8999999999999984 344554
No 11
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=95.43 E-value=0.01 Score=41.70 Aligned_cols=17 Identities=35% Similarity=1.048 Sum_probs=15.2
Q ss_pred ccccccCceeeeEEEeC
Q 048032 71 DELGQGGYGRVYKGKLS 87 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~ 87 (93)
+.||+|+||+||||.+-
T Consensus 398 ~rIGsGsFGtV~Rg~wh 414 (678)
T KOG0193|consen 398 ERIGSGSFGTVYRGRWH 414 (678)
T ss_pred ceeccccccceeecccc
Confidence 47999999999999884
No 12
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=95.39 E-value=0.012 Score=39.81 Aligned_cols=22 Identities=32% Similarity=0.502 Sum_probs=20.2
Q ss_pred cccccCceeeeEEEeCCCeeeC
Q 048032 72 ELGQGGYGRVYKGKLSDGRLVA 93 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~~g~~va 93 (93)
.||+|++|.||+|.+.+|+.||
T Consensus 124 plasaSigQVh~A~l~~G~~Va 145 (437)
T TIGR01982 124 PLAAASIAQVHRARLVDGKEVA 145 (437)
T ss_pred ceeeeehhheEEEEecCCCEEE
Confidence 6999999999999999998775
No 13
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=95.21 E-value=0.0094 Score=38.60 Aligned_cols=22 Identities=55% Similarity=0.987 Sum_probs=18.2
Q ss_pred cccccCceeeeEE-EeCCCeeeC
Q 048032 72 ELGQGGYGRVYKG-KLSDGRLVA 93 (93)
Q Consensus 72 ~iG~G~~g~VYk~-~l~~g~~va 93 (93)
.||+|.||.|||+ ++.+|..+|
T Consensus 26 ~IG~GsFg~vykv~~~~~g~l~a 48 (375)
T KOG0591|consen 26 KIGRGSFGEVYKVQCLLDGKLVA 48 (375)
T ss_pred HHcCCcchheEEeeeccCcchhh
Confidence 7999999999997 557777654
No 14
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=95.21 E-value=0.016 Score=38.88 Aligned_cols=22 Identities=45% Similarity=0.842 Sum_probs=18.1
Q ss_pred cccccCceeeeEEEeC-CCeeeC
Q 048032 72 ELGQGGYGRVYKGKLS-DGRLVA 93 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~-~g~~va 93 (93)
.||+|.|++||+|... ++..||
T Consensus 17 ~iG~GsfavVykg~h~~~~~~VA 39 (429)
T KOG0595|consen 17 EIGSGSFAVVYKGRHKKSGTEVA 39 (429)
T ss_pred hccCcceEEEEEeEeccCCceEE
Confidence 6999999999999984 455554
No 15
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=95.13 E-value=0.016 Score=40.50 Aligned_cols=23 Identities=39% Similarity=0.791 Sum_probs=17.9
Q ss_pred hcchhc--cccccCceeeeEEEeCC
Q 048032 66 TNSFKD--ELGQGGYGRVYKGKLSD 88 (93)
Q Consensus 66 t~~f~~--~iG~G~~g~VYk~~l~~ 88 (93)
.++|.. .||+|+||.||+|...+
T Consensus 131 ~~~y~l~~~LG~G~FG~VYka~~~~ 155 (566)
T PLN03225 131 KDDFVLGKKLGEGAFGVVYKASLVN 155 (566)
T ss_pred cCCeEEeEEEeeCCCeEEEEEEEcC
Confidence 344443 79999999999999854
No 16
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=95.13 E-value=0.013 Score=36.03 Aligned_cols=24 Identities=33% Similarity=0.581 Sum_probs=19.6
Q ss_pred hccccccCceeeeEEEeCCCeeeC
Q 048032 70 KDELGQGGYGRVYKGKLSDGRLVA 93 (93)
Q Consensus 70 ~~~iG~G~~g~VYk~~l~~g~~va 93 (93)
.+.||+|+||.||++..+++..+|
T Consensus 11 ~~~ig~G~~g~v~~~~~~~~~~~a 34 (260)
T cd05067 11 VKKLGAGQFGEVWMGYYNGHTKVA 34 (260)
T ss_pred eeeeccCccceEEeeecCCCceEE
Confidence 347999999999999987776553
No 17
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=94.65 E-value=0.027 Score=33.73 Aligned_cols=23 Identities=35% Similarity=0.489 Sum_probs=19.6
Q ss_pred ccccccCceeeeEEEeCCCeeeC
Q 048032 71 DELGQGGYGRVYKGKLSDGRLVA 93 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~~g~~va 93 (93)
+.||+|++|.||++..++|+.+|
T Consensus 21 ~~i~~G~~g~Vy~~~~~~g~~va 43 (198)
T cd05144 21 NQIGVGKESDVYLALDPDGNPVA 43 (198)
T ss_pred CccccCcceEEEEEEcCCCCEEE
Confidence 47999999999999988777653
No 18
>PHA02882 putative serine/threonine kinase; Provisional
Probab=94.54 E-value=0.027 Score=35.60 Aligned_cols=18 Identities=33% Similarity=0.739 Sum_probs=15.6
Q ss_pred cccccCceeeeEEEeCCC
Q 048032 72 ELGQGGYGRVYKGKLSDG 89 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~~g 89 (93)
.||+|+||.||+|...+.
T Consensus 19 ~LG~G~fG~Vy~~~~~~~ 36 (294)
T PHA02882 19 LIGCGGFGCVYETQCASD 36 (294)
T ss_pred EEecCCCceEEEEEEcCC
Confidence 799999999999987543
No 19
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=94.40 E-value=0.019 Score=39.57 Aligned_cols=22 Identities=45% Similarity=0.990 Sum_probs=17.8
Q ss_pred cccccCceeeeEEEe-CCCeeeC
Q 048032 72 ELGQGGYGRVYKGKL-SDGRLVA 93 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l-~~g~~va 93 (93)
.||+|.||.|||+.- ..|..||
T Consensus 124 kIGeGTyg~VYkAr~~~tgkivA 146 (560)
T KOG0600|consen 124 KIGEGTYGQVYKARDLETGKIVA 146 (560)
T ss_pred HhcCcchhheeEeeecccCcEEE
Confidence 799999999999854 5676665
No 20
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=94.27 E-value=0.046 Score=35.34 Aligned_cols=21 Identities=33% Similarity=0.594 Sum_probs=16.9
Q ss_pred cccccCceeeeEEEeC-CCeee
Q 048032 72 ELGQGGYGRVYKGKLS-DGRLV 92 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~-~g~~v 92 (93)
.||+|++|.||+|... +|..+
T Consensus 22 ~ig~g~~g~v~~~~~~~~~~~v 43 (342)
T cd07879 22 QVGSGAYGSVCSAIDKRTGEKV 43 (342)
T ss_pred EeeecCCeEEEEEEeCCCCcEE
Confidence 7999999999999863 45544
No 21
>smart00090 RIO RIO-like kinase.
Probab=94.24 E-value=0.038 Score=34.44 Aligned_cols=23 Identities=22% Similarity=0.261 Sum_probs=19.3
Q ss_pred ccccccCceeeeEEE--eCCCeeeC
Q 048032 71 DELGQGGYGRVYKGK--LSDGRLVA 93 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~--l~~g~~va 93 (93)
+.||+|++|.||+|. ..+|..||
T Consensus 34 ~~Lg~G~~g~Vy~a~~~~~~g~~va 58 (237)
T smart00090 34 GCISTGKEANVYHALDFDGSGKERA 58 (237)
T ss_pred CeeccCcceeEEEEEecCCCCcEEE
Confidence 479999999999998 66777664
No 22
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=94.15 E-value=0.038 Score=36.10 Aligned_cols=22 Identities=50% Similarity=0.966 Sum_probs=17.6
Q ss_pred cccccCceeeeEEEe-CCCeeeC
Q 048032 72 ELGQGGYGRVYKGKL-SDGRLVA 93 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l-~~g~~va 93 (93)
.||+|.+|+||+|.. .+|..||
T Consensus 18 klGeGtyg~Vykar~~~~g~~VA 40 (323)
T KOG0594|consen 18 KLGEGTYGVVYKARSKRTGKFVA 40 (323)
T ss_pred HhCCCCceEEEEEEEecCCCEEE
Confidence 699999999999977 3565554
No 23
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=94.08 E-value=0.018 Score=36.12 Aligned_cols=36 Identities=31% Similarity=0.609 Sum_probs=26.7
Q ss_pred echHHHHHHhcchhc--cccccCceeeeEEEeC-CCeee
Q 048032 57 YSFPNVKKMTNSFKD--ELGQGGYGRVYKGKLS-DGRLV 92 (93)
Q Consensus 57 ~~~~~l~~at~~f~~--~iG~G~~g~VYk~~l~-~g~~v 92 (93)
+++.++.+++++|.- .||+|++|.||++... ++..+
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~ 50 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLA 50 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEE
Confidence 555667777777764 7999999999999874 44443
No 24
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=93.98 E-value=0.028 Score=35.06 Aligned_cols=35 Identities=23% Similarity=0.494 Sum_probs=24.8
Q ss_pred echHHHHHHhcchhc--cccccCceeeeEEEeC-CCee
Q 048032 57 YSFPNVKKMTNSFKD--ELGQGGYGRVYKGKLS-DGRL 91 (93)
Q Consensus 57 ~~~~~l~~at~~f~~--~iG~G~~g~VYk~~l~-~g~~ 91 (93)
+.++.+..++++|.- .||+|++|.||++... ++..
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~ 45 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSK 45 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCce
Confidence 445556666666653 7999999999999774 3443
No 25
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=93.72 E-value=0.049 Score=33.76 Aligned_cols=17 Identities=35% Similarity=0.751 Sum_probs=14.9
Q ss_pred hccccccCceeeeEEEe
Q 048032 70 KDELGQGGYGRVYKGKL 86 (93)
Q Consensus 70 ~~~iG~G~~g~VYk~~l 86 (93)
.+.||+|+||.||+|.+
T Consensus 10 ~~~ig~G~fg~V~~~~~ 26 (266)
T cd05064 10 ERILGTGRFGELCRGCL 26 (266)
T ss_pred eeeecccCCCeEEEEEE
Confidence 34799999999999976
No 26
>PRK09188 serine/threonine protein kinase; Provisional
Probab=93.65 E-value=0.055 Score=35.98 Aligned_cols=21 Identities=19% Similarity=0.289 Sum_probs=17.0
Q ss_pred cccccCceeeeEEEeC--CCeee
Q 048032 72 ELGQGGYGRVYKGKLS--DGRLV 92 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~--~g~~v 92 (93)
.||+|+||.||++... +++.+
T Consensus 25 ~IG~G~fg~Vy~a~~~~~~~~~v 47 (365)
T PRK09188 25 VLKRDVFSTVERGYFAGDPGTAR 47 (365)
T ss_pred EEeecCcEEEEEEEEcCCCCeEE
Confidence 7999999999999764 45543
No 27
>PF14575 EphA2_TM: Ephrin type-A receptor 2 transmembrane domain; PDB: 3KUL_A 2XVD_A 2VX1_A 2VWV_A 2VX0_A 2VWY_A 2VWZ_A 2VWW_A 2VWU_A 2VWX_A ....
Probab=93.62 E-value=0.042 Score=28.36 Aligned_cols=20 Identities=10% Similarity=0.283 Sum_probs=14.4
Q ss_pred CceechHHHHHHhcchhccc
Q 048032 54 PKRYSFPNVKKMTNSFKDEL 73 (93)
Q Consensus 54 ~~~~~~~~l~~at~~f~~~i 73 (93)
....||+|..+|...|+..|
T Consensus 54 IDP~TYEDP~qAV~eFAkEI 73 (75)
T PF14575_consen 54 IDPHTYEDPNQAVREFAKEI 73 (75)
T ss_dssp --GGGSSSHHHHHHHCSSB-
T ss_pred cCcccccCHHHHHHHHHhhc
Confidence 34678999999998887654
No 28
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=93.60 E-value=0.06 Score=33.10 Aligned_cols=22 Identities=32% Similarity=0.682 Sum_probs=18.2
Q ss_pred ccccccCceeeeEEEeCCCeee
Q 048032 71 DELGQGGYGRVYKGKLSDGRLV 92 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~~g~~v 92 (93)
+.||+|++|.||+|..+++..+
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~v 33 (261)
T cd05072 12 KKLGAGQFGEVWMGYYNNSTKV 33 (261)
T ss_pred eecCCcCCceEEEEEecCCceE
Confidence 4799999999999998766544
No 29
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=93.59 E-value=0.035 Score=34.33 Aligned_cols=21 Identities=48% Similarity=0.971 Sum_probs=16.5
Q ss_pred cccccCceeeeEEEeCC-Ceee
Q 048032 72 ELGQGGYGRVYKGKLSD-GRLV 92 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~~-g~~v 92 (93)
.||+|+||.||+|...+ +..+
T Consensus 13 ~lg~g~~g~vy~~~~~~~~~~~ 34 (272)
T cd06637 13 LVGNGTYGQVYKGRHVKTGQLA 34 (272)
T ss_pred heeecCCeEEEEEEEcCCCcEE
Confidence 79999999999998743 4433
No 30
>PTZ00284 protein kinase; Provisional
Probab=93.59 E-value=0.03 Score=37.89 Aligned_cols=29 Identities=31% Similarity=0.405 Sum_probs=20.2
Q ss_pred Hhcchhc--cccccCceeeeEEEeC-CCeeeC
Q 048032 65 MTNSFKD--ELGQGGYGRVYKGKLS-DGRLVA 93 (93)
Q Consensus 65 at~~f~~--~iG~G~~g~VYk~~l~-~g~~va 93 (93)
.++.|.- .||+|+||.||++... .+..||
T Consensus 127 ~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vA 158 (467)
T PTZ00284 127 STQRFKILSLLGEGTFGKVVEAWDRKRKEYCA 158 (467)
T ss_pred CCCcEEEEEEEEeccCEEEEEEEEcCCCeEEE
Confidence 3444543 7999999999999764 454443
No 31
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=93.47 E-value=0.084 Score=34.21 Aligned_cols=35 Identities=23% Similarity=0.401 Sum_probs=25.0
Q ss_pred hHHHHHHhcchhc--cccccCceeeeEEEe-CCCeeeC
Q 048032 59 FPNVKKMTNSFKD--ELGQGGYGRVYKGKL-SDGRLVA 93 (93)
Q Consensus 59 ~~~l~~at~~f~~--~iG~G~~g~VYk~~l-~~g~~va 93 (93)
..++...+++|.. .||+|+||.||++.. .+|..+|
T Consensus 9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~va 46 (345)
T cd07877 9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVA 46 (345)
T ss_pred HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEE
Confidence 3455566666654 799999999999975 4565543
No 32
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=93.34 E-value=0.047 Score=41.29 Aligned_cols=26 Identities=46% Similarity=0.809 Sum_probs=18.8
Q ss_pred hcchhc--cccccCceeeeEEEeC-CCee
Q 048032 66 TNSFKD--ELGQGGYGRVYKGKLS-DGRL 91 (93)
Q Consensus 66 t~~f~~--~iG~G~~g~VYk~~l~-~g~~ 91 (93)
.++|-+ ++|+||||.|||+.=. ||..
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~ 506 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGRE 506 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchh
Confidence 345655 7999999999998642 5543
No 33
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=93.29 E-value=0.049 Score=33.55 Aligned_cols=22 Identities=32% Similarity=0.673 Sum_probs=18.1
Q ss_pred ccccccCceeeeEEEeCCCeee
Q 048032 71 DELGQGGYGRVYKGKLSDGRLV 92 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~~g~~v 92 (93)
+.||+|++|.||++...++..+
T Consensus 12 ~~lg~g~~~~v~~~~~~~~~~v 33 (261)
T cd05068 12 RKLGAGQFGEVWEGLWNNTTPV 33 (261)
T ss_pred EEecccCCccEEEEEecCCeEE
Confidence 4799999999999988666544
No 34
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=93.29 E-value=0.072 Score=32.78 Aligned_cols=22 Identities=32% Similarity=0.687 Sum_probs=18.1
Q ss_pred ccccccCceeeeEEEeCCCeee
Q 048032 71 DELGQGGYGRVYKGKLSDGRLV 92 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~~g~~v 92 (93)
+.||+|++|.||++..+++..+
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~ 33 (260)
T cd05070 12 KKLGNGQFGEVWMGTWNGNTKV 33 (260)
T ss_pred heeccccCceEEEEEecCCcee
Confidence 4799999999999988766544
No 35
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=93.14 E-value=0.062 Score=34.79 Aligned_cols=16 Identities=31% Similarity=0.754 Sum_probs=14.0
Q ss_pred hccccccCceeeeEEE
Q 048032 70 KDELGQGGYGRVYKGK 85 (93)
Q Consensus 70 ~~~iG~G~~g~VYk~~ 85 (93)
.+.||+|+||.||++.
T Consensus 12 ~~~lG~G~fg~V~~~~ 27 (343)
T cd05103 12 GKPLGRGAFGQVIEAD 27 (343)
T ss_pred cccccCCccceEEEEe
Confidence 3489999999999986
No 36
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=92.85 E-value=0.088 Score=32.31 Aligned_cols=22 Identities=32% Similarity=0.638 Sum_probs=17.7
Q ss_pred ccccccCceeeeEEEeCCCeee
Q 048032 71 DELGQGGYGRVYKGKLSDGRLV 92 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~~g~~v 92 (93)
+.||+|++|.||++..+++..+
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~ 33 (261)
T cd05034 12 RKLGAGQFGEVWMGTWNGTTKV 33 (261)
T ss_pred eeeccCcceEEEEEEEcCCceE
Confidence 3799999999999987665443
No 37
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=92.81 E-value=0.082 Score=32.46 Aligned_cols=21 Identities=38% Similarity=0.515 Sum_probs=17.4
Q ss_pred ccccccCceeeeEEEeCCCee
Q 048032 71 DELGQGGYGRVYKGKLSDGRL 91 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~~g~~ 91 (93)
+.||+|+||.||++...++..
T Consensus 10 ~~lg~G~~~~vy~~~~~~~~~ 30 (256)
T cd05114 10 KELGSGQFGVVHLGKWRAQIK 30 (256)
T ss_pred eEecCCcCceEEEEEeccCce
Confidence 479999999999998866543
No 38
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=92.75 E-value=0.088 Score=32.80 Aligned_cols=35 Identities=31% Similarity=0.732 Sum_probs=22.6
Q ss_pred chHHHHHHhcchh--ccccccCceeeeEEEeC-CCeee
Q 048032 58 SFPNVKKMTNSFK--DELGQGGYGRVYKGKLS-DGRLV 92 (93)
Q Consensus 58 ~~~~l~~at~~f~--~~iG~G~~g~VYk~~l~-~g~~v 92 (93)
++.++..+.+.|. +.||.|+||.||++... ++..+
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~ 44 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLA 44 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEE
Confidence 3444444444443 37999999999999874 34433
No 39
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=92.74 E-value=0.082 Score=32.37 Aligned_cols=22 Identities=32% Similarity=0.589 Sum_probs=17.6
Q ss_pred hccccccCceeeeEEEeCCCee
Q 048032 70 KDELGQGGYGRVYKGKLSDGRL 91 (93)
Q Consensus 70 ~~~iG~G~~g~VYk~~l~~g~~ 91 (93)
.+.||+|++|.||++...++..
T Consensus 9 ~~~ig~g~~g~v~~~~~~~~~~ 30 (256)
T cd05112 9 VQEIGSGQFGLVWLGYWLEKRK 30 (256)
T ss_pred EeeecCcccceEEEEEEeCCCe
Confidence 4479999999999998765543
No 40
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=92.47 E-value=0.14 Score=35.76 Aligned_cols=22 Identities=32% Similarity=0.430 Sum_probs=19.7
Q ss_pred cccccCceeeeEEEeCC-CeeeC
Q 048032 72 ELGQGGYGRVYKGKLSD-GRLVA 93 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~~-g~~va 93 (93)
.||+|++|.||++.+.+ |+.||
T Consensus 126 PlasaSiaQVh~A~l~~~G~~VA 148 (537)
T PRK04750 126 PLASASIAQVHFARLKDNGREVV 148 (537)
T ss_pred hhcCCCccEEEEEEECCCCCEEE
Confidence 69999999999999987 88765
No 41
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=92.46 E-value=0.098 Score=33.08 Aligned_cols=18 Identities=28% Similarity=0.652 Sum_probs=15.2
Q ss_pred ccccccCceeeeEEEeCC
Q 048032 71 DELGQGGYGRVYKGKLSD 88 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~~ 88 (93)
+.||+|+||.||++..++
T Consensus 11 ~~lg~G~fg~V~~~~~~~ 28 (304)
T cd05096 11 EKLGEGQFGEVHLCEVVN 28 (304)
T ss_pred eEecccCCeEEEEEEecc
Confidence 479999999999997643
No 42
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=92.39 E-value=0.069 Score=35.45 Aligned_cols=22 Identities=36% Similarity=0.679 Sum_probs=17.0
Q ss_pred cccccCceeeeEEEeC-CCeeeC
Q 048032 72 ELGQGGYGRVYKGKLS-DGRLVA 93 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~-~g~~va 93 (93)
.|++|.||.||||.-. .++.||
T Consensus 83 rI~EGtyGiVYRakdk~t~eIVA 105 (419)
T KOG0663|consen 83 RIEEGTYGVVYRAKDKKTDEIVA 105 (419)
T ss_pred hcccCcceeEEEeccCCcceeEE
Confidence 6999999999999763 444454
No 43
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=92.37 E-value=0.073 Score=38.09 Aligned_cols=23 Identities=52% Similarity=1.097 Sum_probs=18.7
Q ss_pred ccccccCceeeeEEEe-CCCeeeC
Q 048032 71 DELGQGGYGRVYKGKL-SDGRLVA 93 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l-~~g~~va 93 (93)
+.+|+|+||.||+|.- ..|..||
T Consensus 19 e~LG~Ga~g~V~rgrnketG~~vA 42 (732)
T KOG4250|consen 19 ERLGKGAFGNVYRGRNKETGRLVA 42 (732)
T ss_pred hhhcCCccceeeeecccccccchh
Confidence 4799999999999984 5676665
No 44
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=92.36 E-value=0.097 Score=32.56 Aligned_cols=18 Identities=44% Similarity=0.852 Sum_probs=15.8
Q ss_pred ccccccCceeeeEEEeCC
Q 048032 71 DELGQGGYGRVYKGKLSD 88 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~~ 88 (93)
+.||+|+||.||+|...+
T Consensus 12 ~~i~~g~~g~V~~~~~~~ 29 (280)
T cd05043 12 DLLQEGTFGRIFYGILID 29 (280)
T ss_pred eeecccCCceEEEEEEec
Confidence 489999999999998754
No 45
>PTZ00036 glycogen synthase kinase; Provisional
Probab=92.30 E-value=0.11 Score=35.09 Aligned_cols=22 Identities=32% Similarity=0.548 Sum_probs=17.4
Q ss_pred cccccCceeeeEEEeC-CCeeeC
Q 048032 72 ELGQGGYGRVYKGKLS-DGRLVA 93 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~-~g~~va 93 (93)
.||+|+||.||+|... ++..+|
T Consensus 73 ~LG~G~fg~Vy~~~~~~~~~~vA 95 (440)
T PTZ00036 73 IIGNGSFGVVYEAICIDTSEKVA 95 (440)
T ss_pred EEEeCCCEEEEEEEECCCCCEEE
Confidence 6999999999999874 455543
No 46
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=92.26 E-value=0.099 Score=33.32 Aligned_cols=16 Identities=50% Similarity=0.914 Sum_probs=14.5
Q ss_pred cccccCceeeeEEEeC
Q 048032 72 ELGQGGYGRVYKGKLS 87 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~ 87 (93)
.||+|+||.||+|...
T Consensus 14 ~lg~G~~g~Vy~~~~~ 29 (316)
T cd05108 14 VLGSGAFGTVYKGLWI 29 (316)
T ss_pred eeecCCCceEEEEEEe
Confidence 7999999999999863
No 47
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=92.21 E-value=0.088 Score=33.82 Aligned_cols=16 Identities=31% Similarity=0.725 Sum_probs=14.1
Q ss_pred ccccccCceeeeEEEe
Q 048032 71 DELGQGGYGRVYKGKL 86 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l 86 (93)
+.||+|+||.||++..
T Consensus 13 ~~lG~G~fg~Vy~~~~ 28 (338)
T cd05102 13 KVLGHGAFGKVVEASA 28 (338)
T ss_pred eEeccCCcceEEEEEE
Confidence 4799999999999974
No 48
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=92.21 E-value=0.11 Score=35.78 Aligned_cols=22 Identities=45% Similarity=0.557 Sum_probs=17.5
Q ss_pred cccccCceeeeEEEe-CCCeeeC
Q 048032 72 ELGQGGYGRVYKGKL-SDGRLVA 93 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l-~~g~~va 93 (93)
.||+|+||+||++.. .+|..+|
T Consensus 39 ~LG~G~fG~Vy~a~~~~~g~~vA 61 (496)
T PTZ00283 39 VLGSGATGTVLCAKRVSDGEPFA 61 (496)
T ss_pred EEecCCCEEEEEEEEcCCCCEEE
Confidence 799999999999975 4565553
No 49
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=92.19 E-value=0.21 Score=31.18 Aligned_cols=21 Identities=33% Similarity=0.670 Sum_probs=16.4
Q ss_pred cccccCceeeeEEEeC-CCeee
Q 048032 72 ELGQGGYGRVYKGKLS-DGRLV 92 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~-~g~~v 92 (93)
.||+|+||.||++... +|..+
T Consensus 11 ~lg~G~~g~vy~~~~~~~~~~~ 32 (288)
T cd06616 11 EIGRGAFGTVNKMLHKPSGTIM 32 (288)
T ss_pred HhCCCCceEEEEEEECCCCCEE
Confidence 7999999999998764 34443
No 50
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=92.16 E-value=0.12 Score=34.32 Aligned_cols=19 Identities=47% Similarity=0.866 Sum_probs=16.1
Q ss_pred cccccCceeeeEEEeCCCe
Q 048032 72 ELGQGGYGRVYKGKLSDGR 90 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~~g~ 90 (93)
.||+|+||+||+|.+.+-.
T Consensus 48 ~iG~G~~g~V~~~~~~g~~ 66 (362)
T KOG0192|consen 48 VLGSGSFGTVYKGKWRGTD 66 (362)
T ss_pred hcccCCceeEEEEEeCCce
Confidence 6999999999999995433
No 51
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=92.09 E-value=0.1 Score=32.12 Aligned_cols=21 Identities=24% Similarity=0.544 Sum_probs=17.2
Q ss_pred ccccccCceeeeEEEeCCCee
Q 048032 71 DELGQGGYGRVYKGKLSDGRL 91 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~~g~~ 91 (93)
+.||+|++|.||++...++..
T Consensus 12 ~~lg~g~~~~vy~~~~~~~~~ 32 (260)
T cd05073 12 KKLGAGQFGEVWMATYNKHTK 32 (260)
T ss_pred eEecCccceEEEEEEecCCcc
Confidence 479999999999998765543
No 52
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=92.03 E-value=0.12 Score=31.90 Aligned_cols=18 Identities=33% Similarity=0.835 Sum_probs=15.7
Q ss_pred hccccccCceeeeEEEeC
Q 048032 70 KDELGQGGYGRVYKGKLS 87 (93)
Q Consensus 70 ~~~iG~G~~g~VYk~~l~ 87 (93)
.+.||+|+||.||+|.+.
T Consensus 9 ~~~lg~g~~g~vy~~~~~ 26 (266)
T cd05033 9 EKVIGGGEFGEVCRGRLK 26 (266)
T ss_pred eeEecCCccceEEEEEEc
Confidence 448999999999999884
No 53
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=92.00 E-value=0.12 Score=31.97 Aligned_cols=22 Identities=36% Similarity=0.626 Sum_probs=17.4
Q ss_pred ccccccCceeeeEEEeCCCeee
Q 048032 71 DELGQGGYGRVYKGKLSDGRLV 92 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~~g~~v 92 (93)
+.||+|++|.||++..++...+
T Consensus 12 ~~lg~g~~~~v~~~~~~~~~~v 33 (262)
T cd05071 12 VKLGQGCFGEVWMGTWNGTTRV 33 (262)
T ss_pred eecCCCCCCcEEEEEecCCceE
Confidence 4799999999999987654333
No 54
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=91.90 E-value=0.11 Score=35.37 Aligned_cols=16 Identities=38% Similarity=0.806 Sum_probs=14.4
Q ss_pred ccccccCceeeeEEEe
Q 048032 71 DELGQGGYGRVYKGKL 86 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l 86 (93)
+.||+|.||.||||.-
T Consensus 19 ~~IgrGsfG~Vyk~~d 34 (467)
T KOG0201|consen 19 ELIGRGSFGEVYKAID 34 (467)
T ss_pred hhccccccceeeeeee
Confidence 3799999999999975
No 55
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=91.80 E-value=0.13 Score=33.82 Aligned_cols=16 Identities=31% Similarity=0.733 Sum_probs=14.1
Q ss_pred ccccccCceeeeEEEe
Q 048032 71 DELGQGGYGRVYKGKL 86 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l 86 (93)
+.||+|+||.||++..
T Consensus 41 ~~LG~G~fG~V~~~~~ 56 (375)
T cd05104 41 KTLGAGAFGKVVEATA 56 (375)
T ss_pred heecCCccceEEEEEE
Confidence 4899999999999864
No 56
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=91.62 E-value=0.16 Score=35.97 Aligned_cols=26 Identities=54% Similarity=0.851 Sum_probs=20.3
Q ss_pred chhc-cccccCceeeeEEEeC-CCeeeC
Q 048032 68 SFKD-ELGQGGYGRVYKGKLS-DGRLVA 93 (93)
Q Consensus 68 ~f~~-~iG~G~~g~VYk~~l~-~g~~va 93 (93)
-|++ ++|+|-||+||-|.-. +|+.||
T Consensus 566 if~devLGSGQFG~VYgg~hRktGrdVA 593 (888)
T KOG4236|consen 566 IFADEVLGSGQFGTVYGGKHRKTGRDVA 593 (888)
T ss_pred hhhHhhccCCcceeeecceecccCceee
Confidence 3555 8999999999998773 566664
No 57
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=91.48 E-value=0.13 Score=31.57 Aligned_cols=22 Identities=32% Similarity=0.598 Sum_probs=17.9
Q ss_pred ccccccCceeeeEEEeCCCeee
Q 048032 71 DELGQGGYGRVYKGKLSDGRLV 92 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~~g~~v 92 (93)
+.||.|++|.||++...++..+
T Consensus 12 ~~ig~g~~~~vy~~~~~~~~~~ 33 (261)
T cd05148 12 RKLGSGYFGEVWEGLWKNRVRV 33 (261)
T ss_pred hhhccCCCccEEEeEecCCCcE
Confidence 3799999999999988665443
No 58
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=91.29 E-value=0.15 Score=38.00 Aligned_cols=22 Identities=55% Similarity=1.023 Sum_probs=19.4
Q ss_pred cccccCceeeeEEEeCCCeeeC
Q 048032 72 ELGQGGYGRVYKGKLSDGRLVA 93 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~~g~~va 93 (93)
.||+|++|+||+|.-.+|..+|
T Consensus 705 e~G~g~y~~vy~a~~~~~~~~a 726 (974)
T KOG1166|consen 705 EIGEGSYGSVYVATHSNGKLVA 726 (974)
T ss_pred eeccccceEEEEeecCCCcEEE
Confidence 6999999999999988887665
No 59
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=91.15 E-value=0.2 Score=32.55 Aligned_cols=21 Identities=43% Similarity=0.645 Sum_probs=17.0
Q ss_pred cccccCceeeeEEEeC-CCeee
Q 048032 72 ELGQGGYGRVYKGKLS-DGRLV 92 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~-~g~~v 92 (93)
.||+|+||.||++... +|..+
T Consensus 81 ~lg~G~~g~V~~~~~~~~~~~v 102 (353)
T PLN00034 81 RIGSGAGGTVYKVIHRPTGRLY 102 (353)
T ss_pred hccCCCCeEEEEEEECCCCCEE
Confidence 7999999999999864 45544
No 60
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=91.11 E-value=0.21 Score=34.84 Aligned_cols=22 Identities=27% Similarity=0.607 Sum_probs=16.9
Q ss_pred cccccCceeeeEEEeC-CCeeeC
Q 048032 72 ELGQGGYGRVYKGKLS-DGRLVA 93 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~-~g~~va 93 (93)
+||+|+||.||.+.-. .|...|
T Consensus 148 ~IgkGAfGeVrLarKk~Tg~iyA 170 (550)
T KOG0605|consen 148 VIGKGAFGEVRLARKKDTGEIYA 170 (550)
T ss_pred eeccccceeEEEEEEccCCcEEe
Confidence 7999999999998764 354443
No 61
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=90.97 E-value=0.36 Score=31.15 Aligned_cols=21 Identities=29% Similarity=0.415 Sum_probs=16.5
Q ss_pred cccccCceeeeEEEeC-CCeee
Q 048032 72 ELGQGGYGRVYKGKLS-DGRLV 92 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~-~g~~v 92 (93)
.||+|+||.||++... ++..+
T Consensus 22 ~lg~G~~g~V~~~~~~~~~~~v 43 (343)
T cd07878 22 PVGSGAYGSVCSAYDTRLRQKV 43 (343)
T ss_pred ecccCCCeEEEEEEECCCCCEE
Confidence 7999999999999763 44444
No 62
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=90.85 E-value=0.15 Score=35.11 Aligned_cols=17 Identities=53% Similarity=1.152 Sum_probs=15.4
Q ss_pred ccccccCceeeeEEEeC
Q 048032 71 DELGQGGYGRVYKGKLS 87 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~ 87 (93)
+.||+|.||.||+|.|.
T Consensus 163 kkLGeGaFGeV~~G~l~ 179 (474)
T KOG0194|consen 163 KKLGEGAFGEVFKGKLK 179 (474)
T ss_pred ceeecccccEEEEEEEE
Confidence 47999999999999984
No 63
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=90.74 E-value=0.37 Score=32.08 Aligned_cols=21 Identities=38% Similarity=0.656 Sum_probs=16.7
Q ss_pred cccccCceeeeEEEeC-CCeee
Q 048032 72 ELGQGGYGRVYKGKLS-DGRLV 92 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~-~g~~v 92 (93)
.||+|..|+|||+... .+...
T Consensus 86 ~lG~G~gG~V~kv~Hk~t~~i~ 107 (364)
T KOG0581|consen 86 VLGSGNGGTVYKVRHKPTGKIY 107 (364)
T ss_pred hcccCCCcEEEEEEEcCCCeEE
Confidence 7999999999999884 44433
No 64
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=90.68 E-value=0.19 Score=32.37 Aligned_cols=22 Identities=36% Similarity=0.665 Sum_probs=17.4
Q ss_pred ccccccCceeeeEEEeC-CCeee
Q 048032 71 DELGQGGYGRVYKGKLS-DGRLV 92 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~-~g~~v 92 (93)
+.||+|+||.||++... +|..+
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~~ 46 (329)
T PTZ00263 24 ETLGTGSFGRVRIAKHKGTGEYY 46 (329)
T ss_pred EEEEecCCeEEEEEEECCCCCEE
Confidence 37999999999999885 45444
No 65
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=90.46 E-value=0.24 Score=31.10 Aligned_cols=22 Identities=45% Similarity=0.874 Sum_probs=17.0
Q ss_pred ccccccCceeeeEEEeC-CCeee
Q 048032 71 DELGQGGYGRVYKGKLS-DGRLV 92 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~-~g~~v 92 (93)
+.||+|+||.||++... ++..+
T Consensus 11 ~~lg~G~~g~Vy~~~~~~~~~~v 33 (288)
T cd07871 11 DKLGEGTYATVFKGRSKLTENLV 33 (288)
T ss_pred eEEecCCCEEEEEEEECCCCCEE
Confidence 38999999999999764 34443
No 66
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=90.42 E-value=0.21 Score=31.15 Aligned_cols=17 Identities=47% Similarity=1.085 Sum_probs=14.7
Q ss_pred hccccccCceeeeEEEe
Q 048032 70 KDELGQGGYGRVYKGKL 86 (93)
Q Consensus 70 ~~~iG~G~~g~VYk~~l 86 (93)
.+.||+|+||.||+|..
T Consensus 10 ~~~lg~g~~g~vy~~~~ 26 (283)
T cd05090 10 MEELGECAFGKIYKGHL 26 (283)
T ss_pred eeeccccCCcceEEEEE
Confidence 34799999999999975
No 67
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=90.27 E-value=0.2 Score=30.87 Aligned_cols=21 Identities=38% Similarity=0.529 Sum_probs=17.0
Q ss_pred hccccccCceeeeEEEeCCCe
Q 048032 70 KDELGQGGYGRVYKGKLSDGR 90 (93)
Q Consensus 70 ~~~iG~G~~g~VYk~~l~~g~ 90 (93)
.+.||+|++|.||.+...++.
T Consensus 9 ~~~lg~G~~~~vy~~~~~~~~ 29 (256)
T cd05113 9 LKELGTGQFGVVKYGKWRGQY 29 (256)
T ss_pred eeEecCcccceEEEEEecCCC
Confidence 347999999999999876544
No 68
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=90.22 E-value=0.25 Score=30.44 Aligned_cols=22 Identities=32% Similarity=0.584 Sum_probs=17.6
Q ss_pred hccccccCceeeeEEEeCCCee
Q 048032 70 KDELGQGGYGRVYKGKLSDGRL 91 (93)
Q Consensus 70 ~~~iG~G~~g~VYk~~l~~g~~ 91 (93)
.+.||+|++|.||++..+++..
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~~~ 32 (260)
T cd05069 11 DVKLGQGCFGEVWMGTWNGTTK 32 (260)
T ss_pred eeeecCcCCCeEEEEEEcCCce
Confidence 3479999999999998865543
No 69
>PHA02988 hypothetical protein; Provisional
Probab=90.20 E-value=0.22 Score=31.35 Aligned_cols=35 Identities=20% Similarity=0.278 Sum_probs=23.4
Q ss_pred CceechHHHHHHhcchhccccccCceeeeEEEeCCCeee
Q 048032 54 PKRYSFPNVKKMTNSFKDELGQGGYGRVYKGKLSDGRLV 92 (93)
Q Consensus 54 ~~~~~~~~l~~at~~f~~~iG~G~~g~VYk~~l~~g~~v 92 (93)
.+.++.+|+...+ ...|++|+++.||+|.. +|..|
T Consensus 12 ~~~i~~~~i~~~~---~~~i~~g~~~~v~~~~~-~~~~v 46 (283)
T PHA02988 12 IKCIESDDIDKYT---SVLIKENDQNSIYKGIF-NNKEV 46 (283)
T ss_pred ceecCHHHcCCCC---CeEEeeCCceEEEEEEE-CCEEE
Confidence 3455666663221 12799999999999998 45554
No 70
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=90.02 E-value=0.3 Score=30.08 Aligned_cols=21 Identities=43% Similarity=0.858 Sum_probs=17.0
Q ss_pred cccccCceeeeEEEe-CCCeee
Q 048032 72 ELGQGGYGRVYKGKL-SDGRLV 92 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l-~~g~~v 92 (93)
.||+|+||.||+|.. .+|..+
T Consensus 16 ~lg~g~~g~vy~~~~~~~~~~~ 37 (267)
T cd06646 16 RVGSGTYGDVYKARNLHTGELA 37 (267)
T ss_pred eeecCCCeEEEEEEECCCCeEE
Confidence 799999999999986 455544
No 71
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=90.02 E-value=0.2 Score=32.51 Aligned_cols=16 Identities=31% Similarity=0.775 Sum_probs=14.1
Q ss_pred ccccccCceeeeEEEe
Q 048032 71 DELGQGGYGRVYKGKL 86 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l 86 (93)
+.||+|+||.||++..
T Consensus 13 ~~lG~G~fg~Vy~a~~ 28 (337)
T cd05054 13 KPLGRGAFGKVIQASA 28 (337)
T ss_pred cccccCcCceEEeccc
Confidence 4799999999999864
No 72
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=90.02 E-value=0.23 Score=30.47 Aligned_cols=20 Identities=40% Similarity=0.586 Sum_probs=16.5
Q ss_pred hccccccCceeeeEEEeCCC
Q 048032 70 KDELGQGGYGRVYKGKLSDG 89 (93)
Q Consensus 70 ~~~iG~G~~g~VYk~~l~~g 89 (93)
.+.||+|++|.||++...++
T Consensus 9 ~~~lg~G~~~~v~~~~~~~~ 28 (256)
T cd05059 9 LKELGSGQFGVVHLGKWRGK 28 (256)
T ss_pred hhhhccCCCceEEEeEecCC
Confidence 44799999999999987554
No 73
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=89.87 E-value=0.18 Score=35.16 Aligned_cols=26 Identities=23% Similarity=0.388 Sum_probs=22.0
Q ss_pred chhc-cccccCceeeeEEEeCCCeeeC
Q 048032 68 SFKD-ELGQGGYGRVYKGKLSDGRLVA 93 (93)
Q Consensus 68 ~f~~-~iG~G~~g~VYk~~l~~g~~va 93 (93)
.|++ .|+.++.|.||+|+|.+|+.||
T Consensus 127 eF~~~PiAsASIaQVH~A~L~sG~~VA 153 (517)
T COG0661 127 EFEPEPIASASIAQVHRAVLKSGEEVA 153 (517)
T ss_pred HcCCCchhhhhHhhheeEEecCCCEEE
Confidence 3443 6999999999999999998875
No 74
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=89.79 E-value=0.28 Score=30.53 Aligned_cols=20 Identities=50% Similarity=0.971 Sum_probs=16.2
Q ss_pred ccccccCceeeeEEEe-CCCe
Q 048032 71 DELGQGGYGRVYKGKL-SDGR 90 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l-~~g~ 90 (93)
+.||+|+||.||+|.. ++|.
T Consensus 13 ~~lg~G~~g~vy~~~~~~~~~ 33 (279)
T cd05109 13 KVLGSGAFGTVYKGIWIPDGE 33 (279)
T ss_pred eecCCCCCceEEEEEEecCCC
Confidence 3799999999999975 4554
No 75
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=89.76 E-value=0.2 Score=32.96 Aligned_cols=16 Identities=25% Similarity=0.530 Sum_probs=14.6
Q ss_pred cccccCceeeeEEEeC
Q 048032 72 ELGQGGYGRVYKGKLS 87 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~ 87 (93)
.||+|+||.||++...
T Consensus 50 ~lG~G~fg~Vy~~~~~ 65 (371)
T cd05622 50 VIGRGAFGEVQLVRHK 65 (371)
T ss_pred EEeecCCeEEEEEEEC
Confidence 7999999999999875
No 76
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=89.66 E-value=0.3 Score=30.42 Aligned_cols=23 Identities=30% Similarity=0.751 Sum_probs=17.5
Q ss_pred hccccccCceeeeEEEeC-CCeee
Q 048032 70 KDELGQGGYGRVYKGKLS-DGRLV 92 (93)
Q Consensus 70 ~~~iG~G~~g~VYk~~l~-~g~~v 92 (93)
.+.||.|+||.||+|... ++..+
T Consensus 9 ~~~ig~G~~~~vy~~~~~~~~~~~ 32 (277)
T cd06641 9 LEKIGKGSFGEVFKGIDNRTQKVV 32 (277)
T ss_pred heeEeecCCeEEEEEEECCCCcEE
Confidence 347999999999999763 45444
No 77
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=89.65 E-value=0.38 Score=30.20 Aligned_cols=21 Identities=48% Similarity=0.988 Sum_probs=17.2
Q ss_pred cccccCceeeeEEEeC-CCeee
Q 048032 72 ELGQGGYGRVYKGKLS-DGRLV 92 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~-~g~~v 92 (93)
.||+|++|.||+|... +|..+
T Consensus 14 ~lg~g~~g~v~~~~~~~~~~~v 35 (302)
T cd07864 14 QIGEGTYGQVYKARDKDTGELV 35 (302)
T ss_pred eecccCCEEEEEEEECCCCcEE
Confidence 7999999999999985 45444
No 78
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=89.61 E-value=0.28 Score=30.63 Aligned_cols=16 Identities=44% Similarity=0.657 Sum_probs=14.5
Q ss_pred ccccccCceeeeEEEe
Q 048032 71 DELGQGGYGRVYKGKL 86 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l 86 (93)
+.||+|+||.||+|..
T Consensus 13 ~~lg~G~~~~vy~~~~ 28 (279)
T cd05111 13 KLLGSGVFGTVHKGIW 28 (279)
T ss_pred cccCccCCcceEEEEE
Confidence 3799999999999986
No 79
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=89.55 E-value=0.28 Score=30.06 Aligned_cols=19 Identities=26% Similarity=0.609 Sum_probs=16.0
Q ss_pred hccccccCceeeeEEEeCC
Q 048032 70 KDELGQGGYGRVYKGKLSD 88 (93)
Q Consensus 70 ~~~iG~G~~g~VYk~~l~~ 88 (93)
.+.||+|++|.||++...+
T Consensus 11 ~~~ig~g~~g~v~~~~~~~ 29 (256)
T cd05039 11 GATIGKGEFGDVMLGDYRG 29 (256)
T ss_pred eeeeecCCCceEEEEEecC
Confidence 3489999999999998753
No 80
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=89.33 E-value=0.34 Score=30.73 Aligned_cols=16 Identities=44% Similarity=0.960 Sum_probs=14.5
Q ss_pred cccccCceeeeEEEeC
Q 048032 72 ELGQGGYGRVYKGKLS 87 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~ 87 (93)
.||+|+||.||++...
T Consensus 13 ~lg~G~~g~Vy~~~~~ 28 (309)
T cd07872 13 KLGEGTYATVFKGRSK 28 (309)
T ss_pred EecccCCEEEEEEEec
Confidence 7999999999999764
No 81
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=89.20 E-value=0.28 Score=30.27 Aligned_cols=17 Identities=35% Similarity=0.892 Sum_probs=15.2
Q ss_pred ccccccCceeeeEEEeC
Q 048032 71 DELGQGGYGRVYKGKLS 87 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~ 87 (93)
+.||+|++|.||++.+.
T Consensus 11 ~~lg~g~~g~vy~~~~~ 27 (268)
T cd05063 11 KVIGAGEFGEVFRGILK 27 (268)
T ss_pred eEecCCCCccEEEEEEe
Confidence 37999999999999884
No 82
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=89.16 E-value=0.22 Score=32.75 Aligned_cols=21 Identities=19% Similarity=0.450 Sum_probs=16.6
Q ss_pred cccccCceeeeEEEeCC-Ceee
Q 048032 72 ELGQGGYGRVYKGKLSD-GRLV 92 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~~-g~~v 92 (93)
.||+|+||.||++...+ +..+
T Consensus 50 ~lG~G~fg~Vy~~~~~~~~~~~ 71 (370)
T cd05621 50 VIGRGAFGEVQLVRHKSSQKVY 71 (370)
T ss_pred EEEecCCeEEEEEEECCCCCEE
Confidence 69999999999998753 4433
No 83
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=88.96 E-value=0.37 Score=30.00 Aligned_cols=17 Identities=29% Similarity=0.597 Sum_probs=14.7
Q ss_pred hccccccCceeeeEEEe
Q 048032 70 KDELGQGGYGRVYKGKL 86 (93)
Q Consensus 70 ~~~iG~G~~g~VYk~~l 86 (93)
.+.||+|+||.||++..
T Consensus 9 ~~~lg~g~~g~v~~~~~ 25 (284)
T cd05081 9 IQQLGKGNFGSVELCRY 25 (284)
T ss_pred eeeccCCCCceEEEEEe
Confidence 34899999999999875
No 84
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=88.95 E-value=0.29 Score=35.13 Aligned_cols=22 Identities=36% Similarity=0.755 Sum_probs=16.4
Q ss_pred cccccCceeeeEEEe-CCCeeeC
Q 048032 72 ELGQGGYGRVYKGKL-SDGRLVA 93 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l-~~g~~va 93 (93)
.||.|+||.||-+.- .+.++||
T Consensus 33 EIGHGSFGAVYfArd~~n~evVA 55 (948)
T KOG0577|consen 33 EIGHGSFGAVYFARDVRNSEVVA 55 (948)
T ss_pred HhcCCccceeEEeeccCccceee
Confidence 699999999998754 3444444
No 85
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=88.85 E-value=0.34 Score=33.63 Aligned_cols=20 Identities=20% Similarity=0.365 Sum_probs=16.6
Q ss_pred ccccccCceeeeEEEeCCCe
Q 048032 71 DELGQGGYGRVYKGKLSDGR 90 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~~g~ 90 (93)
+.||+|+||.||+|.+++..
T Consensus 339 ~~iG~G~~g~Vy~~~~~~~~ 358 (535)
T PRK09605 339 HLIGKGAEADIKKGEYLGRD 358 (535)
T ss_pred ceeccCCcEEEEEEeecCcc
Confidence 37999999999999886543
No 86
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=88.79 E-value=0.31 Score=30.88 Aligned_cols=18 Identities=33% Similarity=0.894 Sum_probs=15.5
Q ss_pred hccccccCceeeeEEEeC
Q 048032 70 KDELGQGGYGRVYKGKLS 87 (93)
Q Consensus 70 ~~~iG~G~~g~VYk~~l~ 87 (93)
.+.||+|+||.||++...
T Consensus 12 ~~~lg~G~~g~V~~a~~~ 29 (303)
T cd05088 12 QDVIGEGNFGQVLKARIK 29 (303)
T ss_pred eeeecCCCCceEEEEEEc
Confidence 348999999999999874
No 87
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=88.61 E-value=0.37 Score=30.46 Aligned_cols=22 Identities=55% Similarity=1.096 Sum_probs=17.3
Q ss_pred ccccccCceeeeEEEeC-CCeee
Q 048032 71 DELGQGGYGRVYKGKLS-DGRLV 92 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~-~g~~v 92 (93)
+.||+|+||.||++... +|..+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~ 33 (303)
T cd07869 11 EKLGEGSYATVYKGKSKVNGKLV 33 (303)
T ss_pred eeEEecCCEEEEEEEECCCCCEE
Confidence 37999999999999874 45444
No 88
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=88.58 E-value=0.3 Score=32.64 Aligned_cols=16 Identities=38% Similarity=0.798 Sum_probs=14.2
Q ss_pred ccccccCceeeeEEEe
Q 048032 71 DELGQGGYGRVYKGKL 86 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l 86 (93)
+.||+|+||.||+|..
T Consensus 43 ~~LG~G~fG~Vy~~~~ 58 (400)
T cd05105 43 RILGSGAFGKVVEGTA 58 (400)
T ss_pred heecCCCCceEEEEEE
Confidence 3799999999999875
No 89
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=88.51 E-value=0.45 Score=29.72 Aligned_cols=22 Identities=36% Similarity=0.511 Sum_probs=17.2
Q ss_pred ccccccCceeeeEEEeC-CCeee
Q 048032 71 DELGQGGYGRVYKGKLS-DGRLV 92 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~-~g~~v 92 (93)
+.||+|++|+||++... +|..+
T Consensus 11 ~~ig~g~~g~v~~~~~~~~~~~~ 33 (284)
T cd06620 11 SDLGAGNGGSVSKVKHIPTGTVM 33 (284)
T ss_pred HHcCCCCCeEEEEEEEcCCCcEE
Confidence 48999999999998764 45443
No 90
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=88.51 E-value=0.18 Score=33.16 Aligned_cols=21 Identities=19% Similarity=0.430 Sum_probs=16.6
Q ss_pred cccccCceeeeEEEeC-CCeee
Q 048032 72 ELGQGGYGRVYKGKLS-DGRLV 92 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~-~g~~v 92 (93)
.||+|+||.||++... ++..+
T Consensus 50 ~lg~G~~g~Vy~~~~~~~~~~~ 71 (370)
T cd05596 50 VIGRGAFGEVQLVRHKSSKQVY 71 (370)
T ss_pred EEeeCCCEEEEEEEECCCCCEE
Confidence 7999999999999874 34443
No 91
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=88.42 E-value=0.42 Score=33.75 Aligned_cols=22 Identities=41% Similarity=0.833 Sum_probs=19.0
Q ss_pred cccccCceeeeEEEe-CCCeeeC
Q 048032 72 ELGQGGYGRVYKGKL-SDGRLVA 93 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l-~~g~~va 93 (93)
.||+|||..+|.+.- ..|+.+|
T Consensus 25 ~LGkGgFA~cYe~~~~~tge~~A 47 (592)
T KOG0575|consen 25 FLGKGGFARCYEARDLDTGEVVA 47 (592)
T ss_pred eeccCcceEEEEEEEcCCCcEEE
Confidence 799999999999976 7787765
No 92
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=88.36 E-value=0.33 Score=30.39 Aligned_cols=20 Identities=50% Similarity=0.991 Sum_probs=15.9
Q ss_pred cccccCceeeeEEEeC-CCee
Q 048032 72 ELGQGGYGRVYKGKLS-DGRL 91 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~-~g~~ 91 (93)
.||+|++|.||+|... +|..
T Consensus 12 ~ig~g~~~~v~~~~~~~~~~~ 32 (291)
T cd07870 12 KLGEGSYATVYKGISRINGQL 32 (291)
T ss_pred EEEecCCEEEEEEEEcCCCcE
Confidence 7999999999999763 3443
No 93
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=88.33 E-value=0.24 Score=31.91 Aligned_cols=31 Identities=32% Similarity=0.564 Sum_probs=21.3
Q ss_pred HHHHhcchhc--cccccCceeeeEEEeC-CCeee
Q 048032 62 VKKMTNSFKD--ELGQGGYGRVYKGKLS-DGRLV 92 (93)
Q Consensus 62 l~~at~~f~~--~iG~G~~g~VYk~~l~-~g~~v 92 (93)
+...+++|.. .||.|+||.||++.-. +|..+
T Consensus 5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~v 38 (328)
T cd07856 5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNV 38 (328)
T ss_pred eeccccceEEEEeecccCCeEEEEEEECCCCCEE
Confidence 3345555553 7999999999999753 45443
No 94
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=88.17 E-value=0.42 Score=29.74 Aligned_cols=17 Identities=53% Similarity=1.075 Sum_probs=14.8
Q ss_pred ccccccCceeeeEEEeC
Q 048032 71 DELGQGGYGRVYKGKLS 87 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~ 87 (93)
+.||+|+||.||+|...
T Consensus 11 ~~lg~G~~g~V~~~~~~ 27 (283)
T cd05091 11 EELGEDRFGKVYKGHLF 27 (283)
T ss_pred HHhCCCCCCeEEEEEEe
Confidence 47899999999999863
No 95
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=88.11 E-value=0.37 Score=31.75 Aligned_cols=16 Identities=31% Similarity=0.733 Sum_probs=13.9
Q ss_pred ccccccCceeeeEEEe
Q 048032 71 DELGQGGYGRVYKGKL 86 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l 86 (93)
+.||+|+||.||++..
T Consensus 44 ~~LG~G~fg~V~~~~~ 59 (374)
T cd05106 44 KTLGAGAFGKVVEATA 59 (374)
T ss_pred heecCCCcccEEEEEE
Confidence 4799999999999863
No 96
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=88.06 E-value=0.5 Score=30.41 Aligned_cols=21 Identities=38% Similarity=0.509 Sum_probs=16.6
Q ss_pred cccccCceeeeEEEeC-CCeee
Q 048032 72 ELGQGGYGRVYKGKLS-DGRLV 92 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~-~g~~v 92 (93)
.||+|+||.||++... +|..+
T Consensus 12 ~lg~G~~g~V~~~~~~~~~~~~ 33 (331)
T cd06649 12 ELGAGNGGVVTKVQHKPSGLIM 33 (331)
T ss_pred eecCCCCEEEEEEEECCCCcEE
Confidence 7999999999999874 34433
No 97
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=87.89 E-value=0.31 Score=36.59 Aligned_cols=17 Identities=47% Similarity=0.987 Sum_probs=15.1
Q ss_pred ccccccCceeeeEEEeC
Q 048032 71 DELGQGGYGRVYKGKLS 87 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~ 87 (93)
..||+|.||.||+|.+.
T Consensus 698 ~~lG~G~FG~VY~g~~~ 714 (1025)
T KOG1095|consen 698 RVLGKGAFGEVYEGTYS 714 (1025)
T ss_pred eeeccccccceEEEEEe
Confidence 36999999999999984
No 98
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=87.77 E-value=0.46 Score=32.94 Aligned_cols=22 Identities=50% Similarity=0.869 Sum_probs=17.7
Q ss_pred cccccCceeeeEEEe-CCCeeeC
Q 048032 72 ELGQGGYGRVYKGKL-SDGRLVA 93 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l-~~g~~va 93 (93)
.+|.|.||.||+|+- ..|..||
T Consensus 17 klGDGTfGsV~la~~~~~~~~VA 39 (538)
T KOG0661|consen 17 KLGDGTFGSVYLAKSKETGELVA 39 (538)
T ss_pred HhcCCcceeEEEeeecCCCceee
Confidence 789999999999976 4565554
No 99
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=87.68 E-value=0.49 Score=29.96 Aligned_cols=21 Identities=38% Similarity=0.909 Sum_probs=17.2
Q ss_pred cccccCceeeeEEEeC-CCeee
Q 048032 72 ELGQGGYGRVYKGKLS-DGRLV 92 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~-~g~~v 92 (93)
.||+|++|.||++... +|..+
T Consensus 14 ~ig~g~~~~v~~~~~~~~~~~v 35 (309)
T cd07845 14 RIGEGTYGIVYRARDTTSGEIV 35 (309)
T ss_pred eeeecCCEEEEEEEECCCCcEE
Confidence 7999999999999874 45554
No 100
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=87.62 E-value=0.59 Score=29.55 Aligned_cols=21 Identities=33% Similarity=0.669 Sum_probs=17.1
Q ss_pred cccccCceeeeEEEeC-CCeee
Q 048032 72 ELGQGGYGRVYKGKLS-DGRLV 92 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~-~g~~v 92 (93)
.||+|++|.||++... +|..+
T Consensus 27 ~lg~g~~g~v~~~~~~~~~~~v 48 (292)
T cd06657 27 KIGEGSTGIVCIATVKSSGKLV 48 (292)
T ss_pred HcCCCCCeEEEEEEEcCCCeEE
Confidence 7999999999999874 55544
No 101
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=87.58 E-value=0.53 Score=29.61 Aligned_cols=22 Identities=36% Similarity=0.806 Sum_probs=18.0
Q ss_pred ccccccCceeeeEEEeCC-Ceee
Q 048032 71 DELGQGGYGRVYKGKLSD-GRLV 92 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~~-g~~v 92 (93)
+.||+|++|.||++...+ +..+
T Consensus 21 ~~lg~g~~~~v~~~~~~~~~~~~ 43 (296)
T cd06618 21 GEIGSGTCGQVYKMRFKKTGHVM 43 (296)
T ss_pred eEeeccCCeEEEEEEECCCCeEE
Confidence 489999999999999864 5544
No 102
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=87.45 E-value=0.58 Score=29.06 Aligned_cols=22 Identities=36% Similarity=0.809 Sum_probs=17.1
Q ss_pred ccccccCceeeeEEEeC-CCeee
Q 048032 71 DELGQGGYGRVYKGKLS-DGRLV 92 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~-~g~~v 92 (93)
+.||+|++|.||+|... ++..+
T Consensus 10 ~~l~~g~~~~vy~~~~~~~~~~v 32 (277)
T cd06642 10 ERIGKGSFGEVYKGIDNRTKEVV 32 (277)
T ss_pred HHhcCCCCeeEEEEEEcCCCeEE
Confidence 37899999999999874 45444
No 103
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=87.42 E-value=0.4 Score=29.73 Aligned_cols=18 Identities=39% Similarity=0.894 Sum_probs=15.4
Q ss_pred ccccccCceeeeEEEeCC
Q 048032 71 DELGQGGYGRVYKGKLSD 88 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~~ 88 (93)
+.||+|++|.||+|...+
T Consensus 11 ~~lg~g~~~~v~~~~~~~ 28 (280)
T cd05049 11 RELGEGAFGKVFLGECYH 28 (280)
T ss_pred hhccccCCceEeeeeecc
Confidence 479999999999998743
No 104
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=87.16 E-value=0.59 Score=30.41 Aligned_cols=21 Identities=29% Similarity=0.263 Sum_probs=16.5
Q ss_pred cccccCceeeeEEEeC-CCeee
Q 048032 72 ELGQGGYGRVYKGKLS-DGRLV 92 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~-~g~~v 92 (93)
.||+|+||.||++.-. .|..+
T Consensus 28 ~lg~G~~g~V~~~~~~~~~~~v 49 (359)
T cd07876 28 PIGSGAQGIVCAAFDTVLGINV 49 (359)
T ss_pred EeecCCCEEEEEEEEcCCCcee
Confidence 7999999999999763 45444
No 105
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=87.03 E-value=0.59 Score=29.48 Aligned_cols=21 Identities=48% Similarity=0.898 Sum_probs=16.5
Q ss_pred cccccCceeeeEEEeC-CCeee
Q 048032 72 ELGQGGYGRVYKGKLS-DGRLV 92 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~-~g~~v 92 (93)
.||+|++|.||++... ++..+
T Consensus 13 ~lg~g~~g~vy~~~~~~~~~~v 34 (301)
T cd07873 13 KLGEGTYATVYKGRSKLTDNLV 34 (301)
T ss_pred EeccCcCEEEEEEEEcCCCcEE
Confidence 7999999999999764 34443
No 106
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=86.97 E-value=0.47 Score=29.30 Aligned_cols=18 Identities=33% Similarity=0.890 Sum_probs=15.6
Q ss_pred hccccccCceeeeEEEeC
Q 048032 70 KDELGQGGYGRVYKGKLS 87 (93)
Q Consensus 70 ~~~iG~G~~g~VYk~~l~ 87 (93)
.+.||+|+||.||+|...
T Consensus 9 ~~~lg~g~~g~vy~~~~~ 26 (269)
T cd05065 9 EEVIGAGEFGEVCRGRLK 26 (269)
T ss_pred EeEecCCCCCeEEEEEEe
Confidence 447999999999999874
No 107
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=86.89 E-value=0.61 Score=29.93 Aligned_cols=21 Identities=43% Similarity=0.803 Sum_probs=16.7
Q ss_pred cccccCceeeeEEEeC-CCeee
Q 048032 72 ELGQGGYGRVYKGKLS-DGRLV 92 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~-~g~~v 92 (93)
.||+|++|.||++... ++..+
T Consensus 16 ~ig~G~~g~vy~~~~~~~~~~v 37 (335)
T PTZ00024 16 HLGEGTYGKVEKAYDTLTGKIV 37 (335)
T ss_pred cccCCCceeEEEEEECCCCCeE
Confidence 7999999999999864 45444
No 108
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=86.69 E-value=0.6 Score=29.18 Aligned_cols=22 Identities=55% Similarity=1.067 Sum_probs=17.3
Q ss_pred ccccccCceeeeEEEeC-CCeee
Q 048032 71 DELGQGGYGRVYKGKLS-DGRLV 92 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~-~g~~v 92 (93)
+.||+|++|.||++... ++..+
T Consensus 11 ~~lg~g~~~~vy~~~~~~~~~~~ 33 (291)
T cd07844 11 DKLGEGSYATVYKGRSKLTGQLV 33 (291)
T ss_pred EEEeecCCeEEEEEEEcCCCcEE
Confidence 38999999999999875 44443
No 109
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=86.68 E-value=0.71 Score=29.83 Aligned_cols=20 Identities=40% Similarity=0.601 Sum_probs=16.2
Q ss_pred cccccCceeeeEEEeC-CCee
Q 048032 72 ELGQGGYGRVYKGKLS-DGRL 91 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~-~g~~ 91 (93)
.||+|+||.||++... +|..
T Consensus 12 ~lg~g~~g~V~~~~~~~~~~~ 32 (333)
T cd06650 12 ELGAGNGGVVFKVSHKPSGLI 32 (333)
T ss_pred cccCCCCEEEEEEEECCCCcE
Confidence 7999999999999875 3443
No 110
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=86.51 E-value=0.63 Score=30.14 Aligned_cols=21 Identities=33% Similarity=0.574 Sum_probs=16.7
Q ss_pred cccccCceeeeEEEe-CCCeee
Q 048032 72 ELGQGGYGRVYKGKL-SDGRLV 92 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l-~~g~~v 92 (93)
.||+|++|.||++.. .+|..+
T Consensus 22 ~lg~G~~g~V~~~~~~~~~~~v 43 (343)
T cd07880 22 QVGSGAYGTVCSALDRRTGAKV 43 (343)
T ss_pred EeeecCCeEEEEEEECCCCcEE
Confidence 799999999999975 355544
No 111
>PHA03209 serine/threonine kinase US3; Provisional
Probab=86.50 E-value=0.67 Score=30.26 Aligned_cols=17 Identities=29% Similarity=0.472 Sum_probs=15.1
Q ss_pred cccccCceeeeEEEeCC
Q 048032 72 ELGQGGYGRVYKGKLSD 88 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~~ 88 (93)
.||+|+||.||++...+
T Consensus 73 ~lg~G~~g~Vy~~~~~~ 89 (357)
T PHA03209 73 TLTPGSEGRVFVATKPG 89 (357)
T ss_pred EecCCCCeEEEEEEECC
Confidence 79999999999998753
No 112
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=86.47 E-value=0.52 Score=29.32 Aligned_cols=17 Identities=47% Similarity=0.878 Sum_probs=15.0
Q ss_pred ccccccCceeeeEEEeC
Q 048032 71 DELGQGGYGRVYKGKLS 87 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~ 87 (93)
+.||+|+||.||+|...
T Consensus 13 ~~ig~g~~g~v~~~~~~ 29 (279)
T cd05057 13 KVLGSGAFGTVYKGVWI 29 (279)
T ss_pred ceecCCCCccEEEEEEe
Confidence 47999999999999874
No 113
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=86.44 E-value=0.58 Score=31.35 Aligned_cols=17 Identities=35% Similarity=0.718 Sum_probs=14.8
Q ss_pred ccccccCceeeeEEEeC
Q 048032 71 DELGQGGYGRVYKGKLS 87 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~ 87 (93)
+.||+|+||.||++...
T Consensus 43 ~~lG~G~fG~Vy~~~~~ 59 (401)
T cd05107 43 RTLGSGAFGRVVEATAH 59 (401)
T ss_pred hhccCCCceeEEEEEEc
Confidence 37999999999999863
No 114
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=86.32 E-value=0.67 Score=30.36 Aligned_cols=20 Identities=35% Similarity=0.710 Sum_probs=16.4
Q ss_pred ccccccCceeeeEEEeCC-Ce
Q 048032 71 DELGQGGYGRVYKGKLSD-GR 90 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~~-g~ 90 (93)
+.||+|.||+||.+...+ |.
T Consensus 23 ~~lG~Gs~G~V~l~~~~~~g~ 43 (313)
T KOG0198|consen 23 KLLGRGSFGSVYLATNKKTGE 43 (313)
T ss_pred ccccCccceEEEEEEecCCCc
Confidence 379999999999998753 44
No 115
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=86.18 E-value=0.69 Score=28.48 Aligned_cols=22 Identities=41% Similarity=0.836 Sum_probs=16.8
Q ss_pred ccccccCceeeeEEEeC-CCeee
Q 048032 71 DELGQGGYGRVYKGKLS-DGRLV 92 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~-~g~~v 92 (93)
+.||+|++|.||++... ++..+
T Consensus 15 ~~lg~g~~~~v~~~~~~~~~~~~ 37 (267)
T cd06645 15 QRIGSGTYGDVYKARNVNTGELA 37 (267)
T ss_pred HHhCCCCCeEEEEEEEcCCCcEE
Confidence 37999999999999763 44443
No 116
>PF15102 TMEM154: TMEM154 protein family
Probab=86.04 E-value=0.92 Score=26.45 Aligned_cols=6 Identities=0% Similarity=0.185 Sum_probs=2.7
Q ss_pred echHHH
Q 048032 57 YSFPNV 62 (93)
Q Consensus 57 ~~~~~l 62 (93)
+.++||
T Consensus 125 iEmeel 130 (146)
T PF15102_consen 125 IEMEEL 130 (146)
T ss_pred hhHHHH
Confidence 344444
No 117
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=86.02 E-value=0.58 Score=30.12 Aligned_cols=21 Identities=33% Similarity=0.575 Sum_probs=16.8
Q ss_pred cccccCceeeeEEEe-CCCeee
Q 048032 72 ELGQGGYGRVYKGKL-SDGRLV 92 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l-~~g~~v 92 (93)
.||+|++|.||+|.. .+|..+
T Consensus 12 ~lg~G~~g~vy~~~~~~~~~~v 33 (336)
T cd07849 12 YIGEGAYGMVCSATHKPTGVKV 33 (336)
T ss_pred EEEecCCeEEEEEEEcCCCCeE
Confidence 799999999999975 355544
No 118
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=85.94 E-value=0.69 Score=31.07 Aligned_cols=23 Identities=43% Similarity=0.733 Sum_probs=18.3
Q ss_pred ccccccCceeeeEEEeCC-CeeeC
Q 048032 71 DELGQGGYGRVYKGKLSD-GRLVA 93 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~~-g~~va 93 (93)
+.||+|.||.||++.-+. |..+|
T Consensus 41 ~~lG~G~Fg~v~~~~~~~tg~~~A 64 (382)
T KOG0032|consen 41 RELGRGQFGVVYLCREKSTGKEVA 64 (382)
T ss_pred hhhCCCCceEEEEEEecCCCceeE
Confidence 479999999999998865 65543
No 119
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=85.92 E-value=0.81 Score=28.70 Aligned_cols=20 Identities=55% Similarity=1.074 Sum_probs=16.3
Q ss_pred cccccCceeeeEEEeCC-Cee
Q 048032 72 ELGQGGYGRVYKGKLSD-GRL 91 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~~-g~~ 91 (93)
.||.|++|.||++...+ +..
T Consensus 19 ~lg~g~~g~vy~~~~~~~~~~ 39 (292)
T cd06644 19 ELGDGAFGKVYKAKNKETGAL 39 (292)
T ss_pred eecCCCCeEEEEEEECCCCce
Confidence 79999999999998753 443
No 120
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=85.92 E-value=0.66 Score=28.73 Aligned_cols=17 Identities=29% Similarity=0.665 Sum_probs=15.1
Q ss_pred ccccccCceeeeEEEeC
Q 048032 71 DELGQGGYGRVYKGKLS 87 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~ 87 (93)
+.||+|+||.||++.+.
T Consensus 10 ~~ig~g~~~~v~~~~~~ 26 (284)
T cd05038 10 KQLGEGHFGKVELCRYD 26 (284)
T ss_pred eeeccCCCeeEEEeeec
Confidence 47999999999999874
No 121
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=85.91 E-value=0.59 Score=30.24 Aligned_cols=21 Identities=38% Similarity=0.657 Sum_probs=16.7
Q ss_pred cccccCceeeeEEEeC-CCeee
Q 048032 72 ELGQGGYGRVYKGKLS-DGRLV 92 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~-~g~~v 92 (93)
.||+|++|.||++... ++..+
T Consensus 22 ~ig~g~~g~vy~~~~~~~~~~~ 43 (343)
T cd07851 22 PVGSGAYGQVCSAFDTKTGRKV 43 (343)
T ss_pred EeccCCceEEEEEEECCCCcEE
Confidence 7999999999999885 34433
No 122
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=85.62 E-value=0.57 Score=30.31 Aligned_cols=16 Identities=38% Similarity=0.804 Sum_probs=14.3
Q ss_pred cccccCceeeeEEEeC
Q 048032 72 ELGQGGYGRVYKGKLS 87 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~ 87 (93)
.||+|+||.||.+.-.
T Consensus 25 ~iG~G~fG~V~~v~~~ 40 (322)
T KOG1164|consen 25 KIGEGGFGAVYLVSDK 40 (322)
T ss_pred eccccCCceEEEEEec
Confidence 7999999999998753
No 123
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=85.60 E-value=0.81 Score=29.42 Aligned_cols=22 Identities=36% Similarity=0.647 Sum_probs=17.2
Q ss_pred ccccccCceeeeEEEeC-CCeee
Q 048032 71 DELGQGGYGRVYKGKLS-DGRLV 92 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~-~g~~v 92 (93)
+.||+|++|.||+|... +|..+
T Consensus 13 ~~lg~g~~~~v~~~~~~~~~~~~ 35 (337)
T cd07852 13 QKLGKGAYGIVWKAIDRRTKEVV 35 (337)
T ss_pred HhhcCCCCeeEEEEEEcCCCeEE
Confidence 37999999999999875 34443
No 124
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=85.53 E-value=0.55 Score=30.18 Aligned_cols=22 Identities=36% Similarity=0.794 Sum_probs=18.5
Q ss_pred cccccCceeeeEEEe-CCCeeeC
Q 048032 72 ELGQGGYGRVYKGKL-SDGRLVA 93 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l-~~g~~va 93 (93)
.||+|+||-.|.|.- .+|+.||
T Consensus 22 kiGsGSFGdIy~~~~i~~ge~VA 44 (341)
T KOG1163|consen 22 KIGSGSFGDIYLGISITSGEEVA 44 (341)
T ss_pred eecCCchhheeeeeeccCCceEE
Confidence 699999999999854 6787775
No 125
>PHA03210 serine/threonine kinase US3; Provisional
Probab=85.40 E-value=0.59 Score=32.21 Aligned_cols=15 Identities=27% Similarity=0.758 Sum_probs=13.6
Q ss_pred cccccCceeeeEEEe
Q 048032 72 ELGQGGYGRVYKGKL 86 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l 86 (93)
.||+|+||.||++.+
T Consensus 155 ~LG~G~fG~Vyl~~~ 169 (501)
T PHA03210 155 DLPAGAFGKIFICAL 169 (501)
T ss_pred EecCCCCcceEEEEE
Confidence 699999999998865
No 126
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=85.34 E-value=0.64 Score=30.24 Aligned_cols=17 Identities=35% Similarity=0.685 Sum_probs=14.9
Q ss_pred ccccccCceeeeEEEeC
Q 048032 71 DELGQGGYGRVYKGKLS 87 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~ 87 (93)
+.||+|+||.||++...
T Consensus 36 ~~ig~G~~g~Vy~a~~~ 52 (340)
T PTZ00426 36 RTLGTGSFGRVILATYK 52 (340)
T ss_pred EEEeecCCeEEEEEEEE
Confidence 37999999999999864
No 127
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=85.32 E-value=0.68 Score=28.78 Aligned_cols=17 Identities=59% Similarity=1.327 Sum_probs=14.9
Q ss_pred ccccccCceeeeEEEeC
Q 048032 71 DELGQGGYGRVYKGKLS 87 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~ 87 (93)
+.||+|++|.||+|...
T Consensus 11 ~~lg~G~~g~Vy~~~~~ 27 (283)
T cd05048 11 EELGEGAFGKVYKGELT 27 (283)
T ss_pred hcccCccCCcEEEEEEe
Confidence 47999999999999874
No 128
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=85.11 E-value=0.78 Score=28.98 Aligned_cols=21 Identities=38% Similarity=0.642 Sum_probs=16.9
Q ss_pred cccccCceeeeEEEe-CCCeee
Q 048032 72 ELGQGGYGRVYKGKL-SDGRLV 92 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l-~~g~~v 92 (93)
.||+|++|.||++.- .++..+
T Consensus 26 ~lg~g~~g~v~~~~~~~~~~~v 47 (297)
T cd06656 26 KIGQGASGTVYTAIDIATGQEV 47 (297)
T ss_pred eeccCCCeEEEEEEECCCCCEE
Confidence 699999999999985 455554
No 129
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=85.11 E-value=0.9 Score=28.77 Aligned_cols=21 Identities=33% Similarity=0.705 Sum_probs=17.0
Q ss_pred cccccCceeeeEEEeC-CCeee
Q 048032 72 ELGQGGYGRVYKGKLS-DGRLV 92 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~-~g~~v 92 (93)
.||+|++|.||++... +|..+
T Consensus 22 ~lg~g~~g~vy~~~~~~~~~~v 43 (307)
T cd06607 22 EIGHGSFGAVYFARDVRTNEVV 43 (307)
T ss_pred eecCCCCeEEEEEEEcCCCcEE
Confidence 7999999999999874 45544
No 130
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=84.95 E-value=0.88 Score=27.87 Aligned_cols=18 Identities=28% Similarity=0.685 Sum_probs=15.5
Q ss_pred ccccccCceeeeEEEeCC
Q 048032 71 DELGQGGYGRVYKGKLSD 88 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~~ 88 (93)
+.||+|++|.||++..++
T Consensus 12 ~~lg~g~~~~v~~~~~~~ 29 (256)
T cd05082 12 QTIGKGEFGDVMLGDYRG 29 (256)
T ss_pred eeecccCCCeEEEEEEcC
Confidence 479999999999998753
No 131
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=84.91 E-value=0.77 Score=28.30 Aligned_cols=17 Identities=47% Similarity=0.946 Sum_probs=15.0
Q ss_pred ccccccCceeeeEEEeC
Q 048032 71 DELGQGGYGRVYKGKLS 87 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~ 87 (93)
+.||+|++|.||++...
T Consensus 12 ~~ig~g~~~~v~~~~~~ 28 (263)
T cd05052 12 HKLGGGQYGEVYEGVWK 28 (263)
T ss_pred eecCCcccceEEEEEEe
Confidence 47999999999999874
No 132
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=84.86 E-value=0.7 Score=29.25 Aligned_cols=15 Identities=53% Similarity=1.015 Sum_probs=14.0
Q ss_pred cccccCceeeeEEEe
Q 048032 72 ELGQGGYGRVYKGKL 86 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l 86 (93)
.||+|++|.||++..
T Consensus 14 ~lg~G~~g~vy~~~~ 28 (303)
T cd05110 14 VLGSGAFGTVYKGIW 28 (303)
T ss_pred ccccCCCccEEEEEE
Confidence 799999999999976
No 133
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=84.80 E-value=0.61 Score=29.01 Aligned_cols=17 Identities=41% Similarity=0.937 Sum_probs=15.2
Q ss_pred cccccCceeeeEEEeCC
Q 048032 72 ELGQGGYGRVYKGKLSD 88 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~~ 88 (93)
.||+|++|.||++...+
T Consensus 13 ~lg~g~~g~vy~~~~~~ 29 (277)
T cd05036 13 ALGHGAFGEVYEGLYRG 29 (277)
T ss_pred ECCCCCCCcEEEEEEec
Confidence 79999999999998854
No 134
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=84.61 E-value=0.96 Score=29.27 Aligned_cols=22 Identities=32% Similarity=0.362 Sum_probs=17.0
Q ss_pred ccccccCceeeeEEEeC-CCeee
Q 048032 71 DELGQGGYGRVYKGKLS-DGRLV 92 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~-~g~~v 92 (93)
+.||.|++|.||++... +|..+
T Consensus 11 ~~Lg~g~~g~vy~~~~~~~~~~v 33 (342)
T cd07854 11 RPLGCGSNGLVFSAVDSDCDKRV 33 (342)
T ss_pred EEecCCCCEEEEEEEECCCCcEE
Confidence 37999999999999763 45443
No 135
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=84.49 E-value=0.91 Score=28.45 Aligned_cols=21 Identities=33% Similarity=0.768 Sum_probs=16.9
Q ss_pred cccccCceeeeEEEeC-CCeee
Q 048032 72 ELGQGGYGRVYKGKLS-DGRLV 92 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~-~g~~v 92 (93)
.||.|++|.||++..+ ++..+
T Consensus 12 ~lg~g~~~~v~~~~~~~~~~~~ 33 (293)
T cd07843 12 RIEEGTYGVVYRARDKKTGEIV 33 (293)
T ss_pred hhcCCCCeEEEEEEECCCCcEE
Confidence 7999999999999885 34433
No 136
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=84.41 E-value=0.8 Score=29.25 Aligned_cols=17 Identities=35% Similarity=0.769 Sum_probs=14.8
Q ss_pred cccccCceeeeEEEeCC
Q 048032 72 ELGQGGYGRVYKGKLSD 88 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~~ 88 (93)
.+|+|.||.||.|.-..
T Consensus 29 ~LgkgkFG~vYlarekk 45 (281)
T KOG0580|consen 29 PLGKGKFGNVYLAREKK 45 (281)
T ss_pred cccCCccccEeEeeecc
Confidence 79999999999997743
No 137
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=84.36 E-value=0.43 Score=31.03 Aligned_cols=20 Identities=40% Similarity=0.737 Sum_probs=15.2
Q ss_pred cccccCceeeeEEEe-CCCee
Q 048032 72 ELGQGGYGRVYKGKL-SDGRL 91 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l-~~g~~ 91 (93)
.||.|.||+|+|=.. +.|..
T Consensus 71 ~iG~G~fG~V~KM~hk~sg~~ 91 (361)
T KOG1006|consen 71 EIGNGAFGTVNKMLHKPSGKL 91 (361)
T ss_pred HhcCCcchhhhhhhcCccCcE
Confidence 799999999998544 34443
No 138
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=84.31 E-value=0.8 Score=28.32 Aligned_cols=16 Identities=38% Similarity=0.810 Sum_probs=14.3
Q ss_pred cccccCceeeeEEEeC
Q 048032 72 ELGQGGYGRVYKGKLS 87 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~ 87 (93)
.||+|+||.||++...
T Consensus 12 ~lg~g~~g~v~~~~~~ 27 (275)
T cd05046 12 TLGRGEFGEVFLAKAK 27 (275)
T ss_pred eecccceeEEEEEEec
Confidence 6999999999999863
No 139
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=84.28 E-value=0.43 Score=34.80 Aligned_cols=20 Identities=40% Similarity=0.923 Sum_probs=16.6
Q ss_pred hhccccccCceeeeEEEeCC
Q 048032 69 FKDELGQGGYGRVYKGKLSD 88 (93)
Q Consensus 69 f~~~iG~G~~g~VYk~~l~~ 88 (93)
|.+.||+|.||.||+|..++
T Consensus 490 ~~~eLGegaFGkVf~a~~~~ 509 (774)
T KOG1026|consen 490 FKEELGEGAFGKVFLAEAYG 509 (774)
T ss_pred ehhhhcCchhhhhhhhhccC
Confidence 34579999999999998854
No 140
>PHA03212 serine/threonine kinase US3; Provisional
Probab=84.21 E-value=0.99 Score=30.07 Aligned_cols=21 Identities=14% Similarity=0.096 Sum_probs=16.2
Q ss_pred cccccCceeeeEEEeC-CCeee
Q 048032 72 ELGQGGYGRVYKGKLS-DGRLV 92 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~-~g~~v 92 (93)
.||+|+||.||++.-. .+..+
T Consensus 99 ~lg~G~~g~V~~~~d~~~~~~v 120 (391)
T PHA03212 99 TFTPGAEGFAFACIDNKTCEHV 120 (391)
T ss_pred EEcCCCCeEEEEEEECCCCCEE
Confidence 6999999999998763 34444
No 141
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=84.09 E-value=0.12 Score=34.11 Aligned_cols=22 Identities=41% Similarity=0.750 Sum_probs=17.7
Q ss_pred cccccCceeeeEEEe-CCCeeeC
Q 048032 72 ELGQGGYGRVYKGKL-SDGRLVA 93 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l-~~g~~va 93 (93)
.+|+|++|+|||+.- ..|+.+|
T Consensus 40 KLGEGSYGSV~KAIH~EsG~v~A 62 (502)
T KOG0574|consen 40 KLGEGSYGSVHKAIHRESGHVLA 62 (502)
T ss_pred HhcCCcchHHHHHHHhccCcEEE
Confidence 799999999999876 3566654
No 142
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=84.01 E-value=0.81 Score=28.68 Aligned_cols=16 Identities=56% Similarity=1.086 Sum_probs=14.1
Q ss_pred ccccccCceeeeEEEe
Q 048032 71 DELGQGGYGRVYKGKL 86 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l 86 (93)
+.||+|+||.||+|..
T Consensus 12 ~~lg~G~~g~Vy~~~~ 27 (288)
T cd05061 12 RELGQGSFGMVYEGNA 27 (288)
T ss_pred eeecCCCCcEEEEEEE
Confidence 3899999999999865
No 143
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=83.95 E-value=1.2 Score=27.73 Aligned_cols=18 Identities=44% Similarity=0.979 Sum_probs=15.5
Q ss_pred ccccccCceeeeEEEeCC
Q 048032 71 DELGQGGYGRVYKGKLSD 88 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~~ 88 (93)
+.||+|++|.||++....
T Consensus 11 ~~lg~g~~g~v~~~~~~~ 28 (282)
T cd06643 11 GELGDGAFGKVYKAQNKE 28 (282)
T ss_pred hhcccCCCeEEEEEEECC
Confidence 379999999999998753
No 144
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=83.91 E-value=1.1 Score=28.20 Aligned_cols=21 Identities=33% Similarity=0.803 Sum_probs=16.8
Q ss_pred cccccCceeeeEEEeC-CCeee
Q 048032 72 ELGQGGYGRVYKGKLS-DGRLV 92 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~-~g~~v 92 (93)
.||+|++|.||++... ++..+
T Consensus 19 ~lg~g~~~~v~~~~~~~~~~~~ 40 (310)
T cd07865 19 KIGQGTFGEVFKARHKKTKQIV 40 (310)
T ss_pred EeecCCCEEEEEEEECCCCcEE
Confidence 7999999999999874 45444
No 145
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=83.83 E-value=0.82 Score=28.56 Aligned_cols=16 Identities=38% Similarity=1.055 Sum_probs=14.2
Q ss_pred cccccCceeeeEEEeC
Q 048032 72 ELGQGGYGRVYKGKLS 87 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~ 87 (93)
.||+|+||.||++..+
T Consensus 12 ~lg~g~~g~v~~~~~~ 27 (288)
T cd05050 12 DIGQGAFGRVFQARAP 27 (288)
T ss_pred cccccccccEEEEEEc
Confidence 7999999999999763
No 146
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=83.73 E-value=0.86 Score=28.52 Aligned_cols=18 Identities=28% Similarity=0.586 Sum_probs=15.4
Q ss_pred ccccccCceeeeEEEeCC
Q 048032 71 DELGQGGYGRVYKGKLSD 88 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~~ 88 (93)
+.||+|+||.||++..++
T Consensus 11 ~~lg~G~~g~v~~~~~~~ 28 (296)
T cd05051 11 EKLGEGQFGEVHLCEADG 28 (296)
T ss_pred ccccCCCCccEEEEEecc
Confidence 489999999999988753
No 147
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=83.65 E-value=1.1 Score=28.54 Aligned_cols=21 Identities=33% Similarity=0.705 Sum_probs=16.6
Q ss_pred cccccCceeeeEEEeC-CCeee
Q 048032 72 ELGQGGYGRVYKGKLS-DGRLV 92 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~-~g~~v 92 (93)
.||+|+||.||++... +|..+
T Consensus 32 ~lg~G~~~~v~~~~~~~~~~~v 53 (317)
T cd06635 32 EIGHGSFGAVYFARDVRTNEVV 53 (317)
T ss_pred eeccCCCeEEEEEEEcCCCcEE
Confidence 7999999999999874 44443
No 148
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=83.22 E-value=0.95 Score=27.99 Aligned_cols=17 Identities=53% Similarity=0.968 Sum_probs=14.9
Q ss_pred ccccccCceeeeEEEeC
Q 048032 71 DELGQGGYGRVYKGKLS 87 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~ 87 (93)
..||+|+||.||++...
T Consensus 12 ~~lg~g~~g~v~~~~~~ 28 (277)
T cd05032 12 RELGQGSFGMVYEGLAK 28 (277)
T ss_pred eEecCCCCceEEEEEEe
Confidence 37999999999999874
No 149
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=83.18 E-value=1.1 Score=28.06 Aligned_cols=16 Identities=31% Similarity=0.700 Sum_probs=14.0
Q ss_pred ccccccCceeeeEEEe
Q 048032 71 DELGQGGYGRVYKGKL 86 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l 86 (93)
..||+|+||.||.+..
T Consensus 10 ~~lg~g~~g~v~~~~~ 25 (284)
T cd05079 10 RDLGEGHFGKVELCRY 25 (284)
T ss_pred eecCCCCceeEEEEEE
Confidence 3799999999999875
No 150
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=83.11 E-value=0.77 Score=28.51 Aligned_cols=15 Identities=60% Similarity=1.101 Sum_probs=13.7
Q ss_pred cccccCceeeeEEEe
Q 048032 72 ELGQGGYGRVYKGKL 86 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l 86 (93)
.||+|++|.||+|..
T Consensus 13 ~ig~G~~g~v~~~~~ 27 (277)
T cd05062 13 ELGQGSFGMVYEGIA 27 (277)
T ss_pred eeccccCCeEEEEEe
Confidence 799999999999875
No 151
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=83.05 E-value=0.98 Score=31.80 Aligned_cols=26 Identities=23% Similarity=0.489 Sum_probs=21.8
Q ss_pred chhc-cccccCceeeeEEEeCCCeeeC
Q 048032 68 SFKD-ELGQGGYGRVYKGKLSDGRLVA 93 (93)
Q Consensus 68 ~f~~-~iG~G~~g~VYk~~l~~g~~va 93 (93)
.|++ .|+.-+.|.||++.|++|+.||
T Consensus 163 ~f~~~piaaASlaQVhrA~L~~G~~Va 189 (538)
T KOG1235|consen 163 EFDEEPIAAASLAQVHRARLKNGEDVA 189 (538)
T ss_pred hcCcchhhhcchhheEEEEecCCCEEE
Confidence 3454 6999999999999999998764
No 152
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=82.95 E-value=1 Score=32.50 Aligned_cols=16 Identities=38% Similarity=0.806 Sum_probs=14.9
Q ss_pred cccccCceeeeEEEeC
Q 048032 72 ELGQGGYGRVYKGKLS 87 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~ 87 (93)
++|+|.||.|+.+.+.
T Consensus 375 vLGkGsFGkV~lae~k 390 (694)
T KOG0694|consen 375 VLGRGSFGKVLLAELK 390 (694)
T ss_pred EeccCcCceEEEEEEc
Confidence 7999999999999884
No 153
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=82.92 E-value=1 Score=27.80 Aligned_cols=19 Identities=32% Similarity=0.709 Sum_probs=15.8
Q ss_pred hccccccCceeeeEEEeCC
Q 048032 70 KDELGQGGYGRVYKGKLSD 88 (93)
Q Consensus 70 ~~~iG~G~~g~VYk~~l~~ 88 (93)
.+.||+|++|.||+|...+
T Consensus 11 ~~~lg~g~~g~v~~~~~~~ 29 (270)
T cd05056 11 GRCIGEGQFGDVYQGVYMS 29 (270)
T ss_pred eeeeCCccceeEEEEEEec
Confidence 3489999999999998643
No 154
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=82.90 E-value=1.1 Score=29.08 Aligned_cols=15 Identities=27% Similarity=0.348 Sum_probs=13.6
Q ss_pred cccccCceeeeEEEe
Q 048032 72 ELGQGGYGRVYKGKL 86 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l 86 (93)
.||+|+||.||++.-
T Consensus 24 ~lg~G~~g~V~~~~~ 38 (355)
T cd07874 24 PIGSGAQGIVCAAYD 38 (355)
T ss_pred EeeecCCEEEEEEEe
Confidence 799999999999865
No 155
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=82.86 E-value=1.4 Score=27.39 Aligned_cols=22 Identities=32% Similarity=0.786 Sum_probs=17.2
Q ss_pred ccccccCceeeeEEEeC-CCeee
Q 048032 71 DELGQGGYGRVYKGKLS-DGRLV 92 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~-~g~~v 92 (93)
+.||.|++|.||+|... ++..+
T Consensus 10 ~~lg~g~~~~vy~~~~~~~~~~v 32 (277)
T cd06640 10 ERIGKGSFGEVFKGIDNRTQQVV 32 (277)
T ss_pred hhcccCCCeEEEEEEEccCCEEE
Confidence 37899999999999874 45544
No 156
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=82.76 E-value=0.98 Score=31.22 Aligned_cols=22 Identities=41% Similarity=0.739 Sum_probs=17.7
Q ss_pred ccccccCceeeeEEEeCCCeee
Q 048032 71 DELGQGGYGRVYKGKLSDGRLV 92 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~~g~~v 92 (93)
..||+|-||.|+.|.+++...|
T Consensus 212 ~~LG~G~FG~V~~g~~~~~~~v 233 (468)
T KOG0197|consen 212 RELGSGQFGEVWLGKWNGSTKV 233 (468)
T ss_pred HHhcCCccceEEEEEEcCCCcc
Confidence 3699999999999999654344
No 157
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=82.60 E-value=1.3 Score=28.03 Aligned_cols=21 Identities=33% Similarity=0.580 Sum_probs=16.6
Q ss_pred cccccCceeeeEEEeC-CCeee
Q 048032 72 ELGQGGYGRVYKGKLS-DGRLV 92 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~-~g~~v 92 (93)
.||+|+||.||++... ++..+
T Consensus 28 ~ig~g~~g~v~~~~~~~~~~~v 49 (297)
T cd06659 28 KIGEGSTGIVCIAREKHSGRQV 49 (297)
T ss_pred hcCCCCceeEEEEEEcCCCCEE
Confidence 6999999999999763 45443
No 158
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=82.54 E-value=1.3 Score=28.21 Aligned_cols=20 Identities=35% Similarity=0.710 Sum_probs=16.0
Q ss_pred cccccCceeeeEEEeC-CCee
Q 048032 72 ELGQGGYGRVYKGKLS-DGRL 91 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~-~g~~ 91 (93)
.||+|++|.||+|... +|..
T Consensus 28 ~lg~g~~g~v~~~~~~~~~~~ 48 (313)
T cd06633 28 EIGHGSFGAVYFATNSHTNEV 48 (313)
T ss_pred eeccCCCeEEEEEEECCCCcE
Confidence 6999999999999874 3443
No 159
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=82.47 E-value=1.2 Score=32.00 Aligned_cols=22 Identities=27% Similarity=0.770 Sum_probs=17.6
Q ss_pred ccccccCceeeeEEEeC-CCeee
Q 048032 71 DELGQGGYGRVYKGKLS-DGRLV 92 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~-~g~~v 92 (93)
+.||+|+||.||++... ++..|
T Consensus 10 ~~LG~G~fg~Vy~a~~~~~~~~v 32 (669)
T cd05610 10 KPISRGAFGKVYLGRKKNNSKLY 32 (669)
T ss_pred EEEecCCCeEEEEEEECCCCcEE
Confidence 47999999999999875 45444
No 160
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=82.18 E-value=1.4 Score=26.84 Aligned_cols=18 Identities=44% Similarity=0.946 Sum_probs=15.7
Q ss_pred ccccccCceeeeEEEeCC
Q 048032 71 DELGQGGYGRVYKGKLSD 88 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~~ 88 (93)
+.||+|++|.||++...+
T Consensus 9 ~~i~~g~~~~v~~~~~~~ 26 (256)
T cd06612 9 EKLGEGSYGSVYKAIHKE 26 (256)
T ss_pred hhhcCCCCeEEEEEEEcC
Confidence 378999999999998864
No 161
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=82.14 E-value=0.85 Score=28.69 Aligned_cols=17 Identities=29% Similarity=0.612 Sum_probs=14.3
Q ss_pred ccccccCceeeeEEEeC
Q 048032 71 DELGQGGYGRVYKGKLS 87 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~ 87 (93)
+.||+|+||.||++...
T Consensus 11 ~~lg~G~~g~v~~~~~~ 27 (295)
T cd05097 11 EKLGEGQFGEVHLCEAE 27 (295)
T ss_pred hccCCCCCceEEecccc
Confidence 47999999999987653
No 162
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=82.08 E-value=1.3 Score=28.87 Aligned_cols=15 Identities=27% Similarity=0.348 Sum_probs=13.7
Q ss_pred cccccCceeeeEEEe
Q 048032 72 ELGQGGYGRVYKGKL 86 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l 86 (93)
.||+|+||.||++.-
T Consensus 31 ~lg~G~~g~V~~~~~ 45 (364)
T cd07875 31 PIGSGAQGIVCAAYD 45 (364)
T ss_pred EeecCCCeEEEEEEE
Confidence 799999999999875
No 163
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=82.01 E-value=1.4 Score=27.71 Aligned_cols=20 Identities=45% Similarity=0.973 Sum_probs=16.1
Q ss_pred cccccCceeeeEEEeC-CCee
Q 048032 72 ELGQGGYGRVYKGKLS-DGRL 91 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~-~g~~ 91 (93)
.||+|++|.||++... ++..
T Consensus 15 ~lg~g~~~~v~~~~~~~~~~~ 35 (311)
T cd07866 15 KLGEGTFGEVYKARQIKTGRV 35 (311)
T ss_pred EeccCCCEEEEEEEECCCCcE
Confidence 7999999999999864 3443
No 164
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=81.88 E-value=1.1 Score=27.91 Aligned_cols=17 Identities=41% Similarity=0.823 Sum_probs=14.5
Q ss_pred hccccccCceeeeEEEe
Q 048032 70 KDELGQGGYGRVYKGKL 86 (93)
Q Consensus 70 ~~~iG~G~~g~VYk~~l 86 (93)
.+.||+|+||.||++..
T Consensus 10 ~~~lg~g~~g~v~~~~~ 26 (280)
T cd05092 10 KWELGEGAFGKVFLAEC 26 (280)
T ss_pred ccccCCccCCeEEEeEE
Confidence 34899999999999864
No 165
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=81.81 E-value=1.3 Score=27.93 Aligned_cols=21 Identities=38% Similarity=0.653 Sum_probs=16.3
Q ss_pred cccccCceeeeEEEe-CCCeee
Q 048032 72 ELGQGGYGRVYKGKL-SDGRLV 92 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l-~~g~~v 92 (93)
.||+|++|.||++.. .++..+
T Consensus 27 ~lg~g~~~~v~~~~~~~~~~~v 48 (296)
T cd06654 27 KIGQGASGTVYTAMDVATGQEV 48 (296)
T ss_pred EecCCCCeEEEEEEECCCCcEE
Confidence 699999999999975 344443
No 166
>PHA03211 serine/threonine kinase US3; Provisional
Probab=81.68 E-value=1.4 Score=30.29 Aligned_cols=17 Identities=29% Similarity=0.487 Sum_probs=15.0
Q ss_pred cccccCceeeeEEEeCC
Q 048032 72 ELGQGGYGRVYKGKLSD 88 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~~ 88 (93)
.||+|+||.||++..++
T Consensus 176 ~Lg~G~~G~Vy~a~~~~ 192 (461)
T PHA03211 176 ALTPGSEGCVFESSHPD 192 (461)
T ss_pred EEccCCCeEEEEEEECC
Confidence 69999999999998854
No 167
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=81.47 E-value=0.92 Score=30.24 Aligned_cols=16 Identities=25% Similarity=0.787 Sum_probs=14.0
Q ss_pred cccccCceeeeEEEeC
Q 048032 72 ELGQGGYGRVYKGKLS 87 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~ 87 (93)
+||+|+||.||.+.-.
T Consensus 32 viGkG~fGkV~~Vrk~ 47 (357)
T KOG0598|consen 32 VIGKGSFGKVFQVRKK 47 (357)
T ss_pred eeeccCCceEEEEEEc
Confidence 7999999999988654
No 168
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=81.17 E-value=1.5 Score=28.30 Aligned_cols=21 Identities=38% Similarity=0.596 Sum_probs=16.3
Q ss_pred cccccCceeeeEEEeC-CCeee
Q 048032 72 ELGQGGYGRVYKGKLS-DGRLV 92 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~-~g~~v 92 (93)
.||+|++|.||++.-. +|..+
T Consensus 12 ~lg~G~~~~vy~~~~~~~~~~v 33 (337)
T cd07858 12 PIGRGAYGIVCSAKNSETNEKV 33 (337)
T ss_pred EeccCCCeEEEEEEecCCCCeE
Confidence 7999999999998763 44443
No 169
>PF09919 DUF2149: Uncharacterized conserved protein (DUF2149); InterPro: IPR018676 This family of conserved hypothetical proteins has no known function.
Probab=81.11 E-value=1.5 Score=23.61 Aligned_cols=17 Identities=47% Similarity=1.069 Sum_probs=13.4
Q ss_pred ccc-CceeeeEEEeCCCeee
Q 048032 74 GQG-GYGRVYKGKLSDGRLV 92 (93)
Q Consensus 74 G~G-~~g~VYk~~l~~g~~v 92 (93)
|+| ..|++|| +++|..+
T Consensus 71 G~G~~~G~aYr--l~~Gk~I 88 (92)
T PF09919_consen 71 GSGERLGTAYR--LKDGKLI 88 (92)
T ss_pred CCCeECeEEEE--cCCceEE
Confidence 555 7899999 8888864
No 170
>PTZ00370 STEVOR; Provisional
Probab=80.24 E-value=0.84 Score=29.55 Aligned_cols=9 Identities=22% Similarity=0.707 Sum_probs=3.6
Q ss_pred Hhhheeeec
Q 048032 13 AIICIFRKK 21 (93)
Q Consensus 13 ~~~~~~~~~ 21 (93)
+.+|+++|+
T Consensus 274 lYiwlyrrR 282 (296)
T PTZ00370 274 LYIWLYRRR 282 (296)
T ss_pred HHHHHHHhh
Confidence 333444333
No 171
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=80.13 E-value=1.6 Score=27.50 Aligned_cols=21 Identities=33% Similarity=0.597 Sum_probs=16.2
Q ss_pred ccccccCceeeeEEEeC-CCee
Q 048032 71 DELGQGGYGRVYKGKLS-DGRL 91 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~-~g~~ 91 (93)
+.||+|++|.||++... ++..
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~ 46 (293)
T cd06647 25 EKIGQGASGTVYTAIDVATGQE 46 (293)
T ss_pred eEecCCCCeEEEEEEEcCCCCE
Confidence 37999999999999753 4443
No 172
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=80.02 E-value=1.4 Score=31.40 Aligned_cols=22 Identities=41% Similarity=0.697 Sum_probs=17.3
Q ss_pred cccccCceeeeEEEe-CCCeeeC
Q 048032 72 ELGQGGYGRVYKGKL-SDGRLVA 93 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l-~~g~~va 93 (93)
.||+|.||.|-|+.- ..++.||
T Consensus 193 ~LGkGtFGQVvk~~d~~T~e~VA 215 (586)
T KOG0667|consen 193 VLGKGSFGQVVKAYDHKTGEIVA 215 (586)
T ss_pred EecccccceeEEEEecCCCcEEE
Confidence 699999999999865 3466665
No 173
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=80.00 E-value=1.1 Score=32.92 Aligned_cols=22 Identities=32% Similarity=0.684 Sum_probs=17.8
Q ss_pred hccccccCceeeeEEEe--CCCee
Q 048032 70 KDELGQGGYGRVYKGKL--SDGRL 91 (93)
Q Consensus 70 ~~~iG~G~~g~VYk~~l--~~g~~ 91 (93)
-|+||+|.||.|.+|.+ ++|..
T Consensus 115 ~e~LG~GsFgvV~rg~Wt~psgk~ 138 (1039)
T KOG0199|consen 115 YELLGEGSFGVVKRGTWTQPSGKH 138 (1039)
T ss_pred HHHhcCcceeeEeeccccCCCCcE
Confidence 34799999999999988 45654
No 174
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=79.99 E-value=1.2 Score=27.18 Aligned_cols=18 Identities=28% Similarity=0.783 Sum_probs=15.1
Q ss_pred ccccccCceeeeEEEeCC
Q 048032 71 DELGQGGYGRVYKGKLSD 88 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~~ 88 (93)
+.||+|+||.||++...+
T Consensus 12 ~~lg~g~~g~v~~~~~~~ 29 (254)
T cd05083 12 EIIGEGEFGAVLQGEYTG 29 (254)
T ss_pred eeeccCCCCceEecccCC
Confidence 489999999999987643
No 175
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=79.84 E-value=1.4 Score=27.51 Aligned_cols=20 Identities=35% Similarity=0.697 Sum_probs=16.4
Q ss_pred cccccCceeeeEEEeC-CCee
Q 048032 72 ELGQGGYGRVYKGKLS-DGRL 91 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~-~g~~ 91 (93)
.||+|++|.||++..+ ++..
T Consensus 26 ~l~~g~~~~v~~~~~~~~~~~ 46 (286)
T cd06614 26 KIGEGASGEVYKATDRATGKE 46 (286)
T ss_pred hccCCCCeEEEEEEEccCCcE
Confidence 7999999999999886 3443
No 176
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=79.75 E-value=1.3 Score=28.10 Aligned_cols=16 Identities=31% Similarity=0.657 Sum_probs=13.9
Q ss_pred ccccccCceeeeEEEe
Q 048032 71 DELGQGGYGRVYKGKL 86 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l 86 (93)
+.||+|+||.||++..
T Consensus 24 ~~lg~G~~g~V~~~~~ 39 (307)
T cd05098 24 KPLGEGCFGQVVMAEA 39 (307)
T ss_pred eeeccCCCeeEEEeEE
Confidence 3799999999999864
No 177
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=79.49 E-value=1.1 Score=32.68 Aligned_cols=17 Identities=47% Similarity=0.931 Sum_probs=15.0
Q ss_pred hccccccCceeeeEEEe
Q 048032 70 KDELGQGGYGRVYKGKL 86 (93)
Q Consensus 70 ~~~iG~G~~g~VYk~~l 86 (93)
...||.|-||.||+|+.
T Consensus 394 ~r~iG~GqFGdVy~gvY 410 (974)
T KOG4257|consen 394 KRLIGEGQFGDVYKGVY 410 (974)
T ss_pred HHhhcCCcccceeeeEe
Confidence 34799999999999977
No 178
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=79.41 E-value=2 Score=27.10 Aligned_cols=21 Identities=29% Similarity=0.499 Sum_probs=16.3
Q ss_pred cccccCceeeeEEEeC-CCeee
Q 048032 72 ELGQGGYGRVYKGKLS-DGRLV 92 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~-~g~~v 92 (93)
.||+|++|.||++... ++..+
T Consensus 29 ~lg~g~~g~v~~~~~~~~~~~v 50 (292)
T cd06658 29 KIGEGSTGIVCIATEKHTGKQV 50 (292)
T ss_pred cccCCCCeEEEEEEECCCCCEE
Confidence 6899999999999764 34433
No 179
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=79.24 E-value=1.9 Score=26.77 Aligned_cols=22 Identities=41% Similarity=0.875 Sum_probs=17.1
Q ss_pred ccccccCceeeeEEEeC-CCeee
Q 048032 71 DELGQGGYGRVYKGKLS-DGRLV 92 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~-~g~~v 92 (93)
+.||.|++|.||++... ++..+
T Consensus 11 ~~l~~g~~~~v~~~~~~~~~~~~ 33 (280)
T cd06611 11 GELGDGAFGKVYKAQHKETGLFA 33 (280)
T ss_pred HHhcCCCCceEEEEEEcCCCcEE
Confidence 37899999999999874 34443
No 180
>PTZ00370 STEVOR; Provisional
Probab=79.11 E-value=0.77 Score=29.72 Aligned_cols=26 Identities=19% Similarity=0.176 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHhhheeeeccCCcchh
Q 048032 3 AGMMGIIITCAIICIFRKKNNSSILW 28 (93)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 28 (93)
+++++++.+++++++.|-.+++++.|
T Consensus 261 alvllil~vvliilYiwlyrrRK~sw 286 (296)
T PTZ00370 261 ALVLLILAVVLIILYIWLYRRRKNSW 286 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcchh
Confidence 33444445566667777667765544
No 181
>PF02009 Rifin_STEVOR: Rifin/stevor family; InterPro: IPR002858 Malaria is still a major cause of mortality in many areas of the world. Plasmodium falciparum causes the most severe human form of the disease and is responsible for most fatalities. Severe cases of malaria can occur when the parasite invades and then proliferates within red blood cell erythrocytes. The parasite produces many variant antigenic proteins, encoded by multigene families, which are present on the surface of the infected erythrocyte and play important roles in virulence. A crucial survival mechanism for the malaria parasite is its ability to evade the immune response by switching these variant surface antigens. The high virulence of P. falciparum relative to other malarial parasites is in large part due to the fact that in this organism many of these surface antigens mediate the binding of infected erythrocytes to the vascular endothelium (cytoadherence) and non-infected erythrocytes (rosetting). This can lead to the accumulation of infected cells in the vasculature of a variety of organs, blocking the blood flow and reducing the oxygen supply. Clinical symptoms of severe infection can include fever, progressive anaemia, multi-organ dysfunction and coma. For more information see []. Several multicopy gene families have been described in Plasmodium falciparum, including the stevor family of subtelomeric open reading frames and the rif interspersed repetitive elements. Both families contain three predicted transmembrane segments. It has been proposed that stevor and rif are members of a larger superfamily that code for variant surface antigens [].
Probab=79.08 E-value=0.7 Score=30.10 Aligned_cols=8 Identities=38% Similarity=0.488 Sum_probs=3.1
Q ss_pred HHhhheee
Q 048032 12 CAIICIFR 19 (93)
Q Consensus 12 ~~~~~~~~ 19 (93)
+++++++|
T Consensus 273 vIIYLILR 280 (299)
T PF02009_consen 273 VIIYLILR 280 (299)
T ss_pred HHHHHHHH
Confidence 33333343
No 182
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=78.79 E-value=1.9 Score=27.68 Aligned_cols=22 Identities=32% Similarity=0.647 Sum_probs=17.1
Q ss_pred ccccccCceeeeEEEeC-CCeee
Q 048032 71 DELGQGGYGRVYKGKLS-DGRLV 92 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~-~g~~v 92 (93)
+.||+|++|.||++... +|..+
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~v 33 (334)
T cd07855 11 ENIGSGAYGVVCSAIDTRSGKKV 33 (334)
T ss_pred eeeecCCCeEEEEEEEcCCCCEE
Confidence 37999999999999764 45444
No 183
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=78.51 E-value=1.6 Score=29.17 Aligned_cols=16 Identities=44% Similarity=0.953 Sum_probs=14.0
Q ss_pred cccccCceeeeEEEeC
Q 048032 72 ELGQGGYGRVYKGKLS 87 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~ 87 (93)
.||+|.+|.|||++-.
T Consensus 31 ~Ig~GTYG~VykA~~~ 46 (438)
T KOG0666|consen 31 KIGRGTYGKVYKAVRK 46 (438)
T ss_pred eecccccceeeEeeec
Confidence 6999999999999653
No 184
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=78.51 E-value=1.1 Score=28.14 Aligned_cols=15 Identities=33% Similarity=0.716 Sum_probs=13.2
Q ss_pred ccccccCceeeeEEE
Q 048032 71 DELGQGGYGRVYKGK 85 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~ 85 (93)
+.||+|+||.||++.
T Consensus 11 ~~lg~G~~g~v~~~~ 25 (296)
T cd05095 11 EKLGEGQFGEVHLCE 25 (296)
T ss_pred eeccCCCCCeEEecc
Confidence 479999999999874
No 185
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=78.41 E-value=2.7 Score=28.99 Aligned_cols=17 Identities=35% Similarity=0.857 Sum_probs=14.8
Q ss_pred cccccCceeeeEEEeCC
Q 048032 72 ELGQGGYGRVYKGKLSD 88 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~~ 88 (93)
++-+|.||.||+|.+.+
T Consensus 291 llqEGtFGri~~gI~~e 307 (563)
T KOG1024|consen 291 LLQEGTFGRIYRGIWRE 307 (563)
T ss_pred hhhcCchhheeeeeecc
Confidence 68899999999998843
No 186
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=78.10 E-value=2.2 Score=27.70 Aligned_cols=21 Identities=29% Similarity=0.407 Sum_probs=16.5
Q ss_pred cccccCceeeeEEEeC-CCeee
Q 048032 72 ELGQGGYGRVYKGKLS-DGRLV 92 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~-~g~~v 92 (93)
.||+|++|.||++.-. +|..+
T Consensus 23 ~lg~g~~g~V~~~~~~~~~~~v 44 (353)
T cd07850 23 PIGSGAQGIVCAAYDTVTGQNV 44 (353)
T ss_pred EeccCCCEEEEEEEECCCCCEE
Confidence 7999999999999763 44443
No 187
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=77.86 E-value=1.6 Score=27.32 Aligned_cols=16 Identities=38% Similarity=0.773 Sum_probs=14.4
Q ss_pred cccccCceeeeEEEeC
Q 048032 72 ELGQGGYGRVYKGKLS 87 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~ 87 (93)
.||+|++|.||++...
T Consensus 19 ~ig~g~~g~v~~~~~~ 34 (293)
T cd05053 19 PLGEGAFGQVVKAEAV 34 (293)
T ss_pred EecccccccEEEEEEe
Confidence 7999999999999763
No 188
>PF05568 ASFV_J13L: African swine fever virus J13L protein; InterPro: IPR008385 This family consists of several African swine fever virus (ASFV) j13L proteins [, , ].
Probab=77.14 E-value=1.3 Score=25.91 Aligned_cols=15 Identities=27% Similarity=0.255 Sum_probs=6.7
Q ss_pred HHHHHhhheeeeccC
Q 048032 9 IITCAIICIFRKKNN 23 (93)
Q Consensus 9 ~~~~~~~~~~~~~~~ 23 (93)
++.+++.+|..||++
T Consensus 44 iiivli~lcssRKkK 58 (189)
T PF05568_consen 44 IIIVLIYLCSSRKKK 58 (189)
T ss_pred HHHHHHHHHhhhhHH
Confidence 333444455545443
No 189
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=77.12 E-value=2.2 Score=26.76 Aligned_cols=16 Identities=38% Similarity=0.910 Sum_probs=14.1
Q ss_pred ccccccCceeeeEEEe
Q 048032 71 DELGQGGYGRVYKGKL 86 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l 86 (93)
+.||+|+||.||++..
T Consensus 11 ~~lg~G~~~~v~~~~~ 26 (288)
T cd05093 11 RELGEGAFGKVFLAEC 26 (288)
T ss_pred cccCCcCCeeEEeeEe
Confidence 3799999999999975
No 190
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=77.03 E-value=4.5 Score=25.12 Aligned_cols=15 Identities=33% Similarity=0.381 Sum_probs=13.2
Q ss_pred ccccCceeeeEEEeC
Q 048032 73 LGQGGYGRVYKGKLS 87 (93)
Q Consensus 73 iG~G~~g~VYk~~l~ 87 (93)
+|+|+||.||++...
T Consensus 24 lg~g~~g~v~~~~~~ 38 (267)
T PHA03390 24 LIDGKFGKVSVLKHK 38 (267)
T ss_pred ecCCCceEEEEEEEc
Confidence 699999999998763
No 191
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=76.92 E-value=0.99 Score=32.20 Aligned_cols=25 Identities=40% Similarity=0.654 Sum_probs=18.2
Q ss_pred hhccccccCceeeeEEEeC-CCeeeC
Q 048032 69 FKDELGQGGYGRVYKGKLS-DGRLVA 93 (93)
Q Consensus 69 f~~~iG~G~~g~VYk~~l~-~g~~va 93 (93)
|+++||+|.|=+||||.-. .|..||
T Consensus 44 ~~evLGrGafKtVYka~De~~giEVA 69 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAFDEEEGIEVA 69 (632)
T ss_pred hhhhcccccceeeeeccccccchhhH
Confidence 4558999999999999653 344443
No 192
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=76.58 E-value=2.5 Score=26.86 Aligned_cols=20 Identities=30% Similarity=0.720 Sum_probs=16.0
Q ss_pred cccccCceeeeEEEeC-CCee
Q 048032 72 ELGQGGYGRVYKGKLS-DGRL 91 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~-~g~~ 91 (93)
.||+|++|.||+|... ++..
T Consensus 22 ~lg~g~~g~v~~~~~~~~~~~ 42 (308)
T cd06634 22 EIGHGSFGAVYFARDVRNSEV 42 (308)
T ss_pred heeeCCCEEEEEEEEcCCCcE
Confidence 7899999999999874 3443
No 193
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=76.44 E-value=1.4 Score=26.99 Aligned_cols=16 Identities=44% Similarity=0.991 Sum_probs=14.7
Q ss_pred cccccCceeeeEEEeC
Q 048032 72 ELGQGGYGRVYKGKLS 87 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~ 87 (93)
.||+|++|.||++...
T Consensus 13 ~l~~g~~~~v~~~~~~ 28 (275)
T cd06608 13 VIGEGTYGKVYKARHK 28 (275)
T ss_pred eecCCCCeEEEEEEEC
Confidence 7999999999999874
No 194
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=75.99 E-value=1.8 Score=30.24 Aligned_cols=20 Identities=35% Similarity=0.790 Sum_probs=16.1
Q ss_pred chhc--cccccCceeeeEEEeC
Q 048032 68 SFKD--ELGQGGYGRVYKGKLS 87 (93)
Q Consensus 68 ~f~~--~iG~G~~g~VYk~~l~ 87 (93)
.|.. +||+||||.||-....
T Consensus 186 ~F~~~RvlGkGGFGEV~acqvr 207 (591)
T KOG0986|consen 186 TFRVYRVLGKGGFGEVCACQVR 207 (591)
T ss_pred ceeeeEEEecccccceeEEEEe
Confidence 4665 8999999999977664
No 195
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=75.94 E-value=2.5 Score=26.47 Aligned_cols=20 Identities=30% Similarity=0.481 Sum_probs=16.1
Q ss_pred cccccCceeeeEEEeC-CCee
Q 048032 72 ELGQGGYGRVYKGKLS-DGRL 91 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~-~g~~ 91 (93)
.||+|++|.||++... ++..
T Consensus 26 ~lg~g~~g~v~~~~~~~~~~~ 46 (285)
T cd06648 26 KIGEGSTGIVCIATDKSTGRQ 46 (285)
T ss_pred EeccCCCeEEEEEEECCCCCE
Confidence 7999999999999863 4443
No 196
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=75.93 E-value=1.8 Score=27.30 Aligned_cols=16 Identities=31% Similarity=0.657 Sum_probs=13.9
Q ss_pred ccccccCceeeeEEEe
Q 048032 71 DELGQGGYGRVYKGKL 86 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l 86 (93)
+.||+|+||.||++..
T Consensus 21 ~~lg~G~~g~Vy~~~~ 36 (304)
T cd05101 21 KPLGEGCFGQVVMAEA 36 (304)
T ss_pred ceeeccCCceEEEEEE
Confidence 3799999999999864
No 197
>KOG4258 consensus Insulin/growth factor receptor (contains protein kinase domain) [Signal transduction mechanisms]
Probab=75.08 E-value=7.2 Score=29.35 Aligned_cols=15 Identities=60% Similarity=1.165 Sum_probs=13.5
Q ss_pred cccccCceeeeEEEe
Q 048032 72 ELGQGGYGRVYKGKL 86 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l 86 (93)
.+|+|+||+||-|.-
T Consensus 1001 elg~gsfg~Vy~g~~ 1015 (1025)
T KOG4258|consen 1001 ELGQGSFGMVYEGNA 1015 (1025)
T ss_pred hhccCccceEEEecC
Confidence 799999999998865
No 198
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=74.76 E-value=3 Score=26.37 Aligned_cols=21 Identities=33% Similarity=0.599 Sum_probs=16.5
Q ss_pred cccccCceeeeEEEe-CCCeee
Q 048032 72 ELGQGGYGRVYKGKL-SDGRLV 92 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l-~~g~~v 92 (93)
.||.|++|.||++.- .+|+.+
T Consensus 26 ~lg~g~~g~vy~~~~~~~~~~v 47 (296)
T cd06655 26 KIGQGASGTVFTAIDVATGQEV 47 (296)
T ss_pred EEecCCCeEEEEEEEcCCCcEE
Confidence 699999999999975 455544
No 199
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=74.45 E-value=2.3 Score=26.20 Aligned_cols=17 Identities=35% Similarity=0.847 Sum_probs=14.9
Q ss_pred hccccccCceeeeEEEe
Q 048032 70 KDELGQGGYGRVYKGKL 86 (93)
Q Consensus 70 ~~~iG~G~~g~VYk~~l 86 (93)
.+.||+|+||.||+|..
T Consensus 9 ~~~lg~g~~g~v~~~~~ 25 (267)
T cd05066 9 EKVIGAGEFGEVCSGRL 25 (267)
T ss_pred eeeecccCCCceEEEEE
Confidence 44899999999999976
No 200
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=74.38 E-value=2.1 Score=27.11 Aligned_cols=16 Identities=31% Similarity=0.733 Sum_probs=13.9
Q ss_pred ccccccCceeeeEEEe
Q 048032 71 DELGQGGYGRVYKGKL 86 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l 86 (93)
+.||+|+||.||++..
T Consensus 41 ~~ig~G~~g~V~~~~~ 56 (302)
T cd05055 41 KTLGAGAFGKVVEATA 56 (302)
T ss_pred ceeeccCCeeEEEEEE
Confidence 3799999999999864
No 201
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=74.18 E-value=2.9 Score=30.68 Aligned_cols=18 Identities=33% Similarity=0.700 Sum_probs=16.0
Q ss_pred cccccCceeeeEEEeCCC
Q 048032 72 ELGQGGYGRVYKGKLSDG 89 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~~g 89 (93)
.|-+|||++||.+...++
T Consensus 44 vLAEGGFa~VYla~~~~~ 61 (738)
T KOG1989|consen 44 VLAEGGFAQVYLAQDVKG 61 (738)
T ss_pred EEccCCcEEEEEEEecCC
Confidence 699999999999988655
No 202
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=74.12 E-value=2 Score=26.71 Aligned_cols=16 Identities=31% Similarity=0.422 Sum_probs=13.0
Q ss_pred hccccccCceeeeEEE
Q 048032 70 KDELGQGGYGRVYKGK 85 (93)
Q Consensus 70 ~~~iG~G~~g~VYk~~ 85 (93)
.+.||+|+||.||.+.
T Consensus 9 ~~~lg~g~~g~v~~~~ 24 (283)
T cd05080 9 IRVLGEGHFGKVSLYC 24 (283)
T ss_pred ceecccCCCcEEEEee
Confidence 3479999999998754
No 203
>PF05454 DAG1: Dystroglycan (Dystrophin-associated glycoprotein 1); InterPro: IPR008465 Dystroglycan is one of the dystrophin-associated glycoproteins, which is encoded by a 5.5 kb transcript in Homo sapiens. The protein product is cleaved into two non-covalently associated subunits, [alpha] (N-terminal) and [beta] (C-terminal). In skeletal muscle the dystroglycan complex works as a transmembrane linkage between the extracellular matrix and the cytoskeleton [alpha]-dystroglycan is extracellular and binds to merosin ([alpha]-2 laminin) in the basement membrane, while [beta]-dystroglycan is a transmembrane protein and binds to dystrophin, which is a large rod-like cytoskeletal protein, absent in Duchenne muscular dystrophy patients. Dystrophin binds to intracellular actin cables. In this way, the dystroglycan complex, which links the extracellular matrix to the intracellular actin cables, is thought to provide structural integrity in muscle tissues. The dystroglycan complex is also known to serve as an agrin receptor in muscle, where it may regulate agrin-induced acetylcholine receptor clustering at the neuromuscular junction. There is also evidence which suggests the function of dystroglycan as a part of the signal transduction pathway because it is shown that Grb2, a mediator of the Ras-related signal pathway, can interact with the cytoplasmic domain of dystroglycan. In general, aberrant expression of dystrophin-associated protein complex underlies the pathogenesis of Duchenne muscular dystrophy, Becker muscular dystrophy and severe childhood autosomal recessive muscular dystrophy. Interestingly, no genetic disease has been described for either [alpha]- or [beta]-dystroglycan. Dystroglycan is widely distributed in non-muscle tissues as well as in muscle tissues. During epithelial morphogenesis of kidney, the dystroglycan complex is shown to act as a receptor for the basement membrane. Dystroglycan expression in Mus musculus brain and neural retina has also been reported. However, the physiological role of dystroglycan in non-muscle tissues has remained unclear [].; PDB: 1EG4_P.
Probab=73.83 E-value=1.1 Score=29.19 Aligned_cols=12 Identities=17% Similarity=0.302 Sum_probs=0.0
Q ss_pred HHhhheeeeccC
Q 048032 12 CAIICIFRKKNN 23 (93)
Q Consensus 12 ~~~~~~~~~~~~ 23 (93)
+++++|++|+++
T Consensus 164 iIa~icyrrkR~ 175 (290)
T PF05454_consen 164 IIACICYRRKRK 175 (290)
T ss_dssp ------------
T ss_pred HHHHHhhhhhhc
Confidence 344444544444
No 204
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=73.73 E-value=2.2 Score=30.26 Aligned_cols=18 Identities=33% Similarity=0.586 Sum_probs=15.2
Q ss_pred hhccccccCceeeeEEEe
Q 048032 69 FKDELGQGGYGRVYKGKL 86 (93)
Q Consensus 69 f~~~iG~G~~g~VYk~~l 86 (93)
|.+.||+|+|++||++.-
T Consensus 77 Fg~~lGeGSYStV~~A~~ 94 (604)
T KOG0592|consen 77 FGKILGEGSYSTVVLARE 94 (604)
T ss_pred hhheeccccceeEEEeee
Confidence 445899999999999864
No 205
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=73.35 E-value=0.9 Score=30.85 Aligned_cols=16 Identities=31% Similarity=0.704 Sum_probs=14.5
Q ss_pred cccccCceeeeEEEeC
Q 048032 72 ELGQGGYGRVYKGKLS 87 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~ 87 (93)
.||+|.|++||++.+.
T Consensus 43 kigeGsFssv~~a~~~ 58 (418)
T KOG1167|consen 43 KIGEGSFSSVYKATDI 58 (418)
T ss_pred cccccchhhhhhhhHh
Confidence 7999999999999874
No 206
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=73.25 E-value=2.3 Score=27.34 Aligned_cols=16 Identities=31% Similarity=0.657 Sum_probs=13.8
Q ss_pred ccccccCceeeeEEEe
Q 048032 71 DELGQGGYGRVYKGKL 86 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l 86 (93)
..||+|+||.||++.-
T Consensus 18 ~~ig~G~~g~v~~~~~ 33 (334)
T cd05100 18 KPLGEGCFGQVVMAEA 33 (334)
T ss_pred ceeccccCCcEEEEEE
Confidence 4799999999999863
No 207
>PF14991 MLANA: Protein melan-A; PDB: 2GTZ_F 2GT9_F 3MRO_P 2GUO_C 3MRQ_P 2GTW_C 3L6F_C 3MRP_P.
Probab=73.23 E-value=1.1 Score=24.92 Aligned_cols=7 Identities=0% Similarity=0.216 Sum_probs=0.0
Q ss_pred hheeeec
Q 048032 15 ICIFRKK 21 (93)
Q Consensus 15 ~~~~~~~ 21 (93)
.|+++|+
T Consensus 44 CWYckRR 50 (118)
T PF14991_consen 44 CWYCKRR 50 (118)
T ss_dssp -------
T ss_pred heeeeec
Confidence 3444433
No 208
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=72.99 E-value=2.4 Score=27.01 Aligned_cols=16 Identities=31% Similarity=0.742 Sum_probs=13.9
Q ss_pred ccccccCceeeeEEEe
Q 048032 71 DELGQGGYGRVYKGKL 86 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l 86 (93)
+.||+|++|.||++..
T Consensus 18 ~~lg~G~~g~vy~~~~ 33 (314)
T cd05099 18 KPLGEGCFGQVVRAEA 33 (314)
T ss_pred eeecCCCcccEEEeee
Confidence 3799999999999863
No 209
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=72.65 E-value=3.3 Score=27.69 Aligned_cols=22 Identities=41% Similarity=0.632 Sum_probs=16.7
Q ss_pred cccccCceeeeEEEe-CCCeeeC
Q 048032 72 ELGQGGYGRVYKGKL-SDGRLVA 93 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l-~~g~~va 93 (93)
.||+|.||.||.|.- ..|..||
T Consensus 24 ~lG~GsfgkV~~a~~~~t~~~vA 46 (370)
T KOG0583|consen 24 TLGSGSFGKVKLAKHRLTGEKVA 46 (370)
T ss_pred eecCCCCeeEEEeeeccCCCeEE
Confidence 699999999999965 3445443
No 210
>PF07204 Orthoreo_P10: Orthoreovirus membrane fusion protein p10; InterPro: IPR009854 This family consists of several Orthoreovirus membrane fusion protein p10 sequences. p10 is thought to be a multifunctional protein that plays a key role in virus-host interaction [].
Probab=71.40 E-value=2.8 Score=22.59 Aligned_cols=10 Identities=30% Similarity=0.531 Sum_probs=3.8
Q ss_pred HHHHHhhhee
Q 048032 9 IITCAIICIF 18 (93)
Q Consensus 9 ~~~~~~~~~~ 18 (93)
+++.+++|+.
T Consensus 56 Iii~Lv~CC~ 65 (98)
T PF07204_consen 56 IIIALVCCCR 65 (98)
T ss_pred HHHHHHHHhh
Confidence 3333333433
No 211
>PHA03207 serine/threonine kinase US3; Provisional
Probab=70.40 E-value=4 Score=27.05 Aligned_cols=15 Identities=27% Similarity=0.379 Sum_probs=13.6
Q ss_pred cccccCceeeeEEEe
Q 048032 72 ELGQGGYGRVYKGKL 86 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l 86 (93)
.||+|++|.||++..
T Consensus 99 ~Lg~G~~g~Vy~~~~ 113 (392)
T PHA03207 99 SLTPGSEGEVFVCTK 113 (392)
T ss_pred eecCCCCeEEEEEEE
Confidence 699999999999875
No 212
>PF11770 GAPT: GRB2-binding adapter (GAPT); InterPro: IPR021082 This entry represents a family of transmembrane proteins which bind the growth factor receptor-bound protein 2 (GRB2) in B cells []. In contrast to other transmembrane adaptor proteins, GAPT, which this entry represents, is not phosphorylated upon BCR ligation. It associates with GRB2 constitutively through its proline-rich region [].
Probab=69.38 E-value=4.2 Score=23.88 Aligned_cols=17 Identities=18% Similarity=0.749 Sum_probs=7.4
Q ss_pred HHHHHHHHHHHhhheee
Q 048032 3 AGMMGIIITCAIICIFR 19 (93)
Q Consensus 3 ~~~~~~~~~~~~~~~~~ 19 (93)
+.++++++++.+-|+|.
T Consensus 16 i~Ll~lLl~cgiGcvwh 32 (158)
T PF11770_consen 16 ISLLLLLLLCGIGCVWH 32 (158)
T ss_pred HHHHHHHHHHhcceEEE
Confidence 33344444444444444
No 213
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=68.40 E-value=3.5 Score=25.83 Aligned_cols=16 Identities=38% Similarity=0.910 Sum_probs=14.1
Q ss_pred ccccccCceeeeEEEe
Q 048032 71 DELGQGGYGRVYKGKL 86 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l 86 (93)
+.||+|++|.||++..
T Consensus 11 ~~lg~g~~g~vy~~~~ 26 (291)
T cd05094 11 RELGEGAFGKVFLAEC 26 (291)
T ss_pred eeecccCCCeEEEeEe
Confidence 4899999999999874
No 214
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=68.10 E-value=5 Score=30.63 Aligned_cols=16 Identities=31% Similarity=0.698 Sum_probs=14.4
Q ss_pred cccccCceeeeEEEeC
Q 048032 72 ELGQGGYGRVYKGKLS 87 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~ 87 (93)
.||+|+||.||++...
T Consensus 20 kLG~GgFGtVYLAkdk 35 (1021)
T PTZ00266 20 KIGNGRFGEVFLVKHK 35 (1021)
T ss_pred EEecCCCeEEEEEEEC
Confidence 7999999999999764
No 215
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=67.04 E-value=5.3 Score=24.34 Aligned_cols=17 Identities=41% Similarity=0.829 Sum_probs=14.9
Q ss_pred ccccccCceeeeEEEeC
Q 048032 71 DELGQGGYGRVYKGKLS 87 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l~ 87 (93)
+.||.|++|.||++...
T Consensus 9 ~~l~~g~~~~v~~~~~~ 25 (262)
T cd06613 9 QRIGSGTYGDVYKARDI 25 (262)
T ss_pred EEecCCCceEEEEeEec
Confidence 47899999999999874
No 216
>PTZ00046 rifin; Provisional
Probab=66.14 E-value=3.2 Score=27.82 Aligned_cols=9 Identities=33% Similarity=0.412 Sum_probs=3.5
Q ss_pred HHHhhheee
Q 048032 11 TCAIICIFR 19 (93)
Q Consensus 11 ~~~~~~~~~ 19 (93)
++++++++|
T Consensus 331 MvIIYLILR 339 (358)
T PTZ00046 331 MVIIYLILR 339 (358)
T ss_pred HHHHHHHHH
Confidence 333434443
No 217
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=63.57 E-value=4.8 Score=28.07 Aligned_cols=24 Identities=25% Similarity=0.450 Sum_probs=18.7
Q ss_pred hccccccCceeeeEE-EeCCCeeeC
Q 048032 70 KDELGQGGYGRVYKG-KLSDGRLVA 93 (93)
Q Consensus 70 ~~~iG~G~~g~VYk~-~l~~g~~va 93 (93)
.++||.|..++||+| +.|.++.||
T Consensus 31 ~e~IG~G~sa~V~~A~c~p~~e~VA 55 (516)
T KOG0582|consen 31 QEVIGVGASAVVYLARCIPTNEVVA 55 (516)
T ss_pred EEEEeccceeEeeeeeecccCCEEE
Confidence 348999999999998 446666664
No 218
>TIGR01477 RIFIN variant surface antigen, rifin family. This model represents the rifin branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of rifin sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 20 bits.
Probab=63.12 E-value=3.9 Score=27.36 Aligned_cols=8 Identities=38% Similarity=0.488 Sum_probs=3.1
Q ss_pred HHhhheee
Q 048032 12 CAIICIFR 19 (93)
Q Consensus 12 ~~~~~~~~ 19 (93)
+++++++|
T Consensus 327 vIIYLILR 334 (353)
T TIGR01477 327 VIIYLILR 334 (353)
T ss_pred HHHHHHHH
Confidence 33333333
No 219
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=61.37 E-value=7.6 Score=28.28 Aligned_cols=25 Identities=32% Similarity=0.577 Sum_probs=20.0
Q ss_pred hhccccccCceeeeEEEeCCCeeeC
Q 048032 69 FKDELGQGGYGRVYKGKLSDGRLVA 93 (93)
Q Consensus 69 f~~~iG~G~~g~VYk~~l~~g~~va 93 (93)
|.+.||+|.||.|-.+++.++..||
T Consensus 542 ~~ekiGeGqFGEVhLCeveg~lkVA 566 (807)
T KOG1094|consen 542 FKEKIGEGQFGEVHLCEVEGPLKVA 566 (807)
T ss_pred hhhhhcCcccceeEEEEecCceEEE
Confidence 4557999999999999887766554
No 220
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=61.20 E-value=5.2 Score=27.07 Aligned_cols=22 Identities=36% Similarity=0.791 Sum_probs=17.2
Q ss_pred cccccCceeeeEEE-eCCCeeeC
Q 048032 72 ELGQGGYGRVYKGK-LSDGRLVA 93 (93)
Q Consensus 72 ~iG~G~~g~VYk~~-l~~g~~va 93 (93)
.||+|.||..+.|. |-++++||
T Consensus 35 KIGeGsFG~lf~G~Nl~nne~VA 57 (449)
T KOG1165|consen 35 KIGEGSFGVLFLGKNLYNNEPVA 57 (449)
T ss_pred ccccCcceeeecccccccCceEE
Confidence 79999999999885 34666665
No 221
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=61.03 E-value=8.9 Score=25.77 Aligned_cols=22 Identities=41% Similarity=0.653 Sum_probs=17.5
Q ss_pred cccccCceeeeEEEe-CCCeeeC
Q 048032 72 ELGQGGYGRVYKGKL-SDGRLVA 93 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l-~~g~~va 93 (93)
.||+|.+|.|..+.- ++|..||
T Consensus 29 ~iG~GAyGvVcsA~~~~t~~~VA 51 (359)
T KOG0660|consen 29 PIGRGAYGVVCSAKDKRTGEKVA 51 (359)
T ss_pred cccCcceeeEEEEEEcCCCCEee
Confidence 699999999998866 4566665
No 222
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=58.33 E-value=2.1 Score=31.41 Aligned_cols=16 Identities=50% Similarity=0.976 Sum_probs=13.8
Q ss_pred cccccCceeeeEEEeC
Q 048032 72 ELGQGGYGRVYKGKLS 87 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~ 87 (93)
.+|-|.||.|||++-.
T Consensus 39 ELGDGAFGKVyKA~nk 54 (1187)
T KOG0579|consen 39 ELGDGAFGKVYKAVNK 54 (1187)
T ss_pred hhcCccchhhhhhhcc
Confidence 5799999999999754
No 223
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=57.85 E-value=6.2 Score=27.07 Aligned_cols=16 Identities=6% Similarity=0.090 Sum_probs=14.0
Q ss_pred ccccccCceeeeEEEe
Q 048032 71 DELGQGGYGRVYKGKL 86 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~l 86 (93)
+.||+|++|.||++.-
T Consensus 73 ~~lg~G~~g~vy~a~~ 88 (478)
T PTZ00267 73 TLVGRNPTTAAFVATR 88 (478)
T ss_pred EEEEeCCCcEEEEEEE
Confidence 3799999999999865
No 224
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=57.18 E-value=9.5 Score=23.49 Aligned_cols=19 Identities=37% Similarity=0.609 Sum_probs=16.5
Q ss_pred cccccCceeeeEEEeCCCe
Q 048032 72 ELGQGGYGRVYKGKLSDGR 90 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~~g~ 90 (93)
.|++|.+|.||.|.+.++.
T Consensus 29 ~L~KG~~s~Vyl~~~~~~~ 47 (201)
T COG2112 29 ELAKGTTSVVYLGEWRGGE 47 (201)
T ss_pred hhhcccccEEEEeeccCce
Confidence 6999999999999887654
No 225
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=56.27 E-value=2.6 Score=29.37 Aligned_cols=24 Identities=25% Similarity=0.623 Sum_probs=18.0
Q ss_pred HHHhcchhc-cccccCceeeeEEEe
Q 048032 63 KKMTNSFKD-ELGQGGYGRVYKGKL 86 (93)
Q Consensus 63 ~~at~~f~~-~iG~G~~g~VYk~~l 86 (93)
.++-.+|.+ .||.|+...||+|.+
T Consensus 186 ~eiF~efn~~PIGsG~IAQVY~atl 210 (565)
T KOG1236|consen 186 EEIFSEFNREPIGSGCIAQVYRATL 210 (565)
T ss_pred HHHHHhcCCcccccchhhhhhhhhh
Confidence 333344554 799999999999987
No 226
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=55.13 E-value=9.3 Score=28.67 Aligned_cols=16 Identities=44% Similarity=0.802 Sum_probs=13.8
Q ss_pred cccccCceeeeEEEeC
Q 048032 72 ELGQGGYGRVYKGKLS 87 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~ 87 (93)
++|+|.+|+||-|.-.
T Consensus 582 VLGKGTYG~VYA~RD~ 597 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDM 597 (1226)
T ss_pred EeecCceeEEEeeccc
Confidence 6999999999988643
No 227
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=53.49 E-value=9.6 Score=27.48 Aligned_cols=20 Identities=35% Similarity=0.652 Sum_probs=16.3
Q ss_pred cccccCceeeeEEEeCCCee
Q 048032 72 ELGQGGYGRVYKGKLSDGRL 91 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~~g~~ 91 (93)
.||+||.+.||++.-.+.+.
T Consensus 368 ~iG~GGSSkV~kV~~s~~~i 387 (677)
T KOG0596|consen 368 QIGSGGSSKVFKVLNSDKQI 387 (677)
T ss_pred hhcCCCcceeeeeecCCCcc
Confidence 59999999999988765443
No 228
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=52.72 E-value=12 Score=24.52 Aligned_cols=24 Identities=33% Similarity=0.428 Sum_probs=20.3
Q ss_pred hccccccCceeeeEEEeCCCeeeC
Q 048032 70 KDELGQGGYGRVYKGKLSDGRLVA 93 (93)
Q Consensus 70 ~~~iG~G~~g~VYk~~l~~g~~va 93 (93)
.+.||.|.=+.||.|..|+|..+|
T Consensus 96 G~~IGvGKEsdVY~~~~~~g~~~~ 119 (304)
T COG0478 96 GTKIGVGKESDVYVAIDPKGRKVA 119 (304)
T ss_pred ccccccCccceEEEEECCCCCEEE
Confidence 447999999999999999887653
No 229
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=50.69 E-value=10 Score=27.14 Aligned_cols=18 Identities=39% Similarity=0.637 Sum_probs=15.4
Q ss_pred hccccccCceeeeEEEeC
Q 048032 70 KDELGQGGYGRVYKGKLS 87 (93)
Q Consensus 70 ~~~iG~G~~g~VYk~~l~ 87 (93)
.+.+|+|.||.|++|.+.
T Consensus 301 ~~~lg~g~fG~v~~~~~~ 318 (609)
T KOG0200|consen 301 GKYLGEGAFGQVVKALLF 318 (609)
T ss_pred cceeecccccceEeEEEe
Confidence 347999999999999873
No 230
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=50.63 E-value=2.2 Score=29.96 Aligned_cols=14 Identities=50% Similarity=0.952 Sum_probs=12.4
Q ss_pred cccccCceeeeEEE
Q 048032 72 ELGQGGYGRVYKGK 85 (93)
Q Consensus 72 ~iG~G~~g~VYk~~ 85 (93)
++|+|||+.|||+.
T Consensus 470 LLGrGGFSEVyKAF 483 (775)
T KOG1151|consen 470 LLGRGGFSEVYKAF 483 (775)
T ss_pred HhccccHHHHHHhc
Confidence 48999999999984
No 231
>PF15050 SCIMP: SCIMP protein
Probab=50.50 E-value=15 Score=20.80 Aligned_cols=7 Identities=29% Similarity=0.942 Sum_probs=2.8
Q ss_pred Hhhheee
Q 048032 13 AIICIFR 19 (93)
Q Consensus 13 ~~~~~~~ 19 (93)
+++|..+
T Consensus 26 IlyCvcR 32 (133)
T PF15050_consen 26 ILYCVCR 32 (133)
T ss_pred HHHHHHH
Confidence 3344343
No 232
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=48.11 E-value=17 Score=25.16 Aligned_cols=17 Identities=41% Similarity=0.626 Sum_probs=15.3
Q ss_pred cccccCceeeeEEEeCC
Q 048032 72 ELGQGGYGRVYKGKLSD 88 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~~ 88 (93)
.+|.|..|+||.+.+.+
T Consensus 84 ~LG~GdiG~VyL~~l~~ 100 (459)
T KOG0610|consen 84 RLGCGDIGTVYLVELRG 100 (459)
T ss_pred HcCCCCceeEEEEEecC
Confidence 69999999999999964
No 233
>PF05084 GRA6: Granule antigen protein (GRA6); InterPro: IPR008119 Toxoplasma gondii is an obligate intracellular apicomplexan protozoan parasite, with a complex lifestyle involving varied hosts []. It has two phases of growth: an intestinal phase in feline hosts, and an extra-intestinal phase in other mammals. Oocysts from infected cats develop into tachyzoites, and eventually, bradyzoites and zoitocysts in the extraintestinal host []. Transmission of the parasite occurs through contact with infected cats or raw/undercooked meat; in immunocompromised individuals, it can cause severe and often lethal toxoplasmosis. Acute infection in healthy humans can sometimes also cause tissue damage []. The protozoan utilises a variety of secretory and antigenic proteins to invade a host and gain access to the intracellular environment []. These originate from distinct organelles in the T. gondii cell termed micronemes, rhoptries, and dense granules. They are released at specific times during invasion to ensure the proteins are allocated to their correct target destinations []. Dense granule antigens (GRAs) are released from the T. gondii tachyzoite while still encapsulated in a host vacuole. Gra6, one of these moieties, is associated with the parasitophorous vacuole []. It possesses a hydrophobic central region flanked by two hydrophilic domains, and is present as a single copy gene in the Toxoplasma gondii genome []. Gra6 shares a similar function with Gra2, in that it is rapidly targeted to a network of membranous tubules that connect with the vacuolar membrane []. Indeed, these two proteins, together with Gra4, form a multimeric complex that stabilises the parasite within the vacuole.
Probab=47.66 E-value=13 Score=22.33 Aligned_cols=21 Identities=14% Similarity=0.376 Sum_probs=11.4
Q ss_pred ChHHHHHHHHHHHhhheeeec
Q 048032 1 LGAGMMGIIITCAIICIFRKK 21 (93)
Q Consensus 1 ~g~~~~~~~~~~~~~~~~~~~ 21 (93)
||++++++.+..+.+.|.+|.
T Consensus 154 IG~~VlA~~VA~L~~~F~RR~ 174 (215)
T PF05084_consen 154 IGAVVLAVSVAMLTWFFLRRT 174 (215)
T ss_pred HHHHHHHHHHHHHHHHHHHhh
Confidence 355556555555555555444
No 234
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=46.35 E-value=13 Score=24.60 Aligned_cols=21 Identities=29% Similarity=0.569 Sum_probs=15.7
Q ss_pred cccccCceeeeEEEeC-CCeee
Q 048032 72 ELGQGGYGRVYKGKLS-DGRLV 92 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~-~g~~v 92 (93)
.||.|.||.|+-..-| +|..|
T Consensus 60 PIGYGAFGVVWsVTDPRdgrrv 81 (449)
T KOG0664|consen 60 PIGYGAFGVVWSVTDPRSGKRV 81 (449)
T ss_pred cccccceeEEEeccCCCCccch
Confidence 6999999999976554 45444
No 235
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=45.64 E-value=11 Score=26.37 Aligned_cols=26 Identities=31% Similarity=0.520 Sum_probs=18.0
Q ss_pred HHHHHhc-chhccccccCceeeeEEEe
Q 048032 61 NVKKMTN-SFKDELGQGGYGRVYKGKL 86 (93)
Q Consensus 61 ~l~~at~-~f~~~iG~G~~g~VYk~~l 86 (93)
+..++|+ ||-.+||+|+||.|..++-
T Consensus 344 d~i~~tDFnFl~VlGKGSFGKVlLaer 370 (683)
T KOG0696|consen 344 DRIKATDFNFLMVLGKGSFGKVLLAER 370 (683)
T ss_pred cceeecccceEEEeccCccceeeeecc
Confidence 4444443 3445899999999987754
No 236
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=45.01 E-value=24 Score=21.89 Aligned_cols=21 Identities=33% Similarity=0.589 Sum_probs=17.0
Q ss_pred hhccccccCc-eeeeEEEeCCC
Q 048032 69 FKDELGQGGY-GRVYKGKLSDG 89 (93)
Q Consensus 69 f~~~iG~G~~-g~VYk~~l~~g 89 (93)
|-+.+|.|.. |.|+|..+.+.
T Consensus 41 flefLg~g~~~~~V~kv~I~g~ 62 (207)
T PF13095_consen 41 FLEFLGHGSHDGYVFKVEIDGR 62 (207)
T ss_pred eeeecCCCCceeEEEEEEECCe
Confidence 3447999999 99999999543
No 237
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=44.55 E-value=16 Score=26.81 Aligned_cols=19 Identities=37% Similarity=0.678 Sum_probs=16.3
Q ss_pred cccccCceeeeEEEeCCCe
Q 048032 72 ELGQGGYGRVYKGKLSDGR 90 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~~g~ 90 (93)
-+|+|.-|.||.|.|.+.+
T Consensus 131 WlGSGaQGAVF~Grl~net 149 (904)
T KOG4721|consen 131 WLGSGAQGAVFLGRLHNET 149 (904)
T ss_pred hhccCcccceeeeeccCce
Confidence 4899999999999996543
No 238
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=44.05 E-value=26 Score=21.85 Aligned_cols=20 Identities=15% Similarity=0.184 Sum_probs=16.4
Q ss_pred ccc-ccCceeeeEEEeCCCee
Q 048032 72 ELG-QGGYGRVYKGKLSDGRL 91 (93)
Q Consensus 72 ~iG-~G~~g~VYk~~l~~g~~ 91 (93)
+|| .|+.|+||+...++++.
T Consensus 38 ~lg~~~g~gtv~~v~~~~~~~ 58 (239)
T PRK01723 38 VVGSAKGRGTTWFVQTPGVNW 58 (239)
T ss_pred eeecCCCCccEEEEEeCCceE
Confidence 688 99999999988876554
No 239
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=43.71 E-value=53 Score=22.06 Aligned_cols=16 Identities=38% Similarity=0.619 Sum_probs=13.4
Q ss_pred cccccCceeeeEEEeC
Q 048032 72 ELGQGGYGRVYKGKLS 87 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~ 87 (93)
.+|.|+||.|-.....
T Consensus 51 tlGtGSFGrV~LVr~k 66 (355)
T KOG0616|consen 51 TLGTGSFGRVHLVREK 66 (355)
T ss_pred eeccCccceEEEEEEc
Confidence 6999999999877663
No 240
>cd03690 Tet_II Tet_II: This subfamily represents domain II of ribosomal protection proteins Tet(M) and Tet(O). This domain has homology to domain II of the elongation factors EF-G and EF-2. Tet(M) and Tet(O) catalyze the release of tetracycline (Tc) from the ribosome in a GTP-dependent manner thereby mediating Tc resistance. Tcs are broad-spectrum antibiotics. Typical Tcs bind to the ribosome and inhibit the elongation phase of protein synthesis, by inhibiting the occupation of site A by aminoacyl-tRNA.
Probab=43.46 E-value=13 Score=19.20 Aligned_cols=21 Identities=29% Similarity=0.286 Sum_probs=16.5
Q ss_pred cccccCceeeeEEEeCCCeee
Q 048032 72 ELGQGGYGRVYKGKLSDGRLV 92 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~~g~~v 92 (93)
-.|+=.++.||.|.+..|..+
T Consensus 16 ~~G~la~~RV~sG~l~~g~~v 36 (85)
T cd03690 16 KGERLAYLRLYSGTLRLRDSV 36 (85)
T ss_pred CCCeEEEEEEccCEEcCCCEE
Confidence 457778899999999877654
No 241
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=39.39 E-value=23 Score=25.31 Aligned_cols=22 Identities=41% Similarity=0.611 Sum_probs=16.0
Q ss_pred cccccCceeeeEEEe-CCCeeeC
Q 048032 72 ELGQGGYGRVYKGKL-SDGRLVA 93 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l-~~g~~va 93 (93)
.||+|..|.||-+.- ..+..||
T Consensus 280 kigqgaSG~vy~A~~~~~~~~Va 302 (550)
T KOG0578|consen 280 KIGQGATGGVYVARKISTKQEVA 302 (550)
T ss_pred hhccccccceeeeeeccCCceEE
Confidence 699999999998743 3444443
No 242
>PF10577 UPF0560: Uncharacterised protein family UPF0560; InterPro: IPR018890 This family of proteins has no known function.
Probab=39.24 E-value=27 Score=26.15 Aligned_cols=15 Identities=33% Similarity=0.950 Sum_probs=6.1
Q ss_pred HHHHHHHhhheeeec
Q 048032 7 GIIITCAIICIFRKK 21 (93)
Q Consensus 7 ~~~~~~~~~~~~~~~ 21 (93)
+++++++++|+.+|+
T Consensus 286 vl~lL~vLl~yCrrk 300 (807)
T PF10577_consen 286 VLILLCVLLCYCRRK 300 (807)
T ss_pred HHHHHHHHHHhhhcc
Confidence 333344444444443
No 243
>PRK11486 flagellar biosynthesis protein FliO; Provisional
Probab=38.23 E-value=20 Score=20.39 Aligned_cols=17 Identities=12% Similarity=0.088 Sum_probs=8.2
Q ss_pred HHHHHHHHHhhheeeec
Q 048032 5 MMGIIITCAIICIFRKK 21 (93)
Q Consensus 5 ~~~~~~~~~~~~~~~~~ 21 (93)
++++.+++++.|+.+|.
T Consensus 26 ~lVl~lI~~~aWLlkR~ 42 (124)
T PRK11486 26 IGIIALILAAAWLVKRL 42 (124)
T ss_pred HHHHHHHHHHHHHHHHc
Confidence 33444444555555553
No 244
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=36.31 E-value=3.3 Score=26.98 Aligned_cols=17 Identities=35% Similarity=0.901 Sum_probs=14.7
Q ss_pred cccccCceeeeEEEeCC
Q 048032 72 ELGQGGYGRVYKGKLSD 88 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~~ 88 (93)
.||+|.||.|+++.-.+
T Consensus 24 kigqGtfgeVFkAr~~n 40 (376)
T KOG0669|consen 24 KIGQGTFGEVFKARSKN 40 (376)
T ss_pred hcCCchHHHHHHHhhcC
Confidence 79999999999987644
No 245
>TIGR01624 LRP1_Cterm LRP1 C-terminal domain. This model represents a tightly conserved small domain found in LRP1 and related plant proteins. This family also contains a well-conserved putative zinc finger domain (TIGR01623). The rest of the sequence of most members consists of highly divergent, low-complexity sequence.
Probab=36.03 E-value=30 Score=16.30 Aligned_cols=13 Identities=54% Similarity=1.025 Sum_probs=10.2
Q ss_pred cccccCceeeeEEEeCC
Q 048032 72 ELGQGGYGRVYKGKLSD 88 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~~ 88 (93)
.|| |+|+||.|-|
T Consensus 35 ~Ig----GHvFkGiLyD 47 (50)
T TIGR01624 35 TIG----GHVFKGFLHD 47 (50)
T ss_pred EEC----ceEEeeEEec
Confidence 466 8999999844
No 246
>cd04088 EFG_mtEFG_II EFG_mtEFG_II: this subfamily represents the domain II of elongation factor G (EF-G) in bacteria and, the C-terminus of mitochondrial Elongation factor G1 (mtEFG1) and G2 (mtEFG2)_like proteins found in eukaryotes. During the process of peptide synthesis and tRNA site changes, the ribosome is moved along the mRNA a distance equal to one codon with the addition of each amino acid. In bacteria this translocation step is catalyzed by EF-G_GTP, which is hydrolyzed to provide the required energy. Thus, this action releases the uncharged tRNA from the P site and transfers the newly formed peptidyl-tRNA from the A site to the P site. Eukaryotic cells harbor 2 protein synthesis systems: one localized in the cytoplasm, the other in the mitochondria. Most factors regulating mitochondrial protein synthesis are encoded by nuclear genes, translated in the cytoplasm, and then transported to the mitochondria. The eukaryotic system of elongation factor (EF) components is more compl
Probab=35.67 E-value=24 Score=17.87 Aligned_cols=21 Identities=33% Similarity=0.591 Sum_probs=15.7
Q ss_pred cccccCceeeeEEEeCCCeee
Q 048032 72 ELGQGGYGRVYKGKLSDGRLV 92 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~~g~~v 92 (93)
..|+=.++.||.|.+..|..+
T Consensus 13 ~~G~~~~~Rv~sG~l~~g~~v 33 (83)
T cd04088 13 FVGKLSFVRVYSGTLKAGSTL 33 (83)
T ss_pred CCceEEEEEEecCEEcCCCEE
Confidence 356667889999999777654
No 247
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=35.43 E-value=31 Score=23.51 Aligned_cols=24 Identities=33% Similarity=0.613 Sum_probs=18.5
Q ss_pred chHHHHHHhcchhccccccCceeeeEE
Q 048032 58 SFPNVKKMTNSFKDELGQGGYGRVYKG 84 (93)
Q Consensus 58 ~~~~l~~at~~f~~~iG~G~~g~VYk~ 84 (93)
+|+|+-+-| .+.+|+|.++.|--+
T Consensus 74 ~F~d~YkLt---~e~LGeGAyasVqtc 97 (463)
T KOG0607|consen 74 KFEDMYKLT---SELLGEGAYASVQTC 97 (463)
T ss_pred hHHHHHHhH---HHHhcCccceeeeee
Confidence 467777777 458999999999654
No 248
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=35.23 E-value=30 Score=26.18 Aligned_cols=21 Identities=48% Similarity=0.775 Sum_probs=15.6
Q ss_pred cccccCcee-eeEEEeCCCeeeC
Q 048032 72 ELGQGGYGR-VYKGKLSDGRLVA 93 (93)
Q Consensus 72 ~iG~G~~g~-VYk~~l~~g~~va 93 (93)
++|.|..|+ ||+|..+ |+.||
T Consensus 516 ilG~Gs~Gt~Vf~G~ye-~R~VA 537 (903)
T KOG1027|consen 516 ILGYGSNGTVVFRGVYE-GREVA 537 (903)
T ss_pred HcccCCCCcEEEEEeeC-Cceeh
Confidence 688888886 5899994 55564
No 249
>cd04090 eEF2_II_snRNP Loc2 eEF2_C_snRNP, cd01514/C terminal domain:eEF2_C_snRNP: This family includes C-terminal portion of the spliceosomal human 116kD U5 small nuclear ribonucleoprotein (snRNP) protein (U5-116 kD) and, its yeast counterpart Snu114p. This domain is homologous to domain II of the eukaryotic translational elongation factor EF-2. Yeast Snu114p is essential for cell viability and for splicing in vivo. U5-116 kD binds GTP. Experiments suggest that GTP binding and probably GTP hydrolysis is important for the function of the U5-116 kD/Snu114p. In complex with GTP, EF-2 promotes the translocation step of translation. During translocation the peptidyl-tRNA is moved from the A site to the P site, the uncharged tRNA from the P site to the E-site and, the mRNA is shifted one codon relative to the ribosome.
Probab=35.14 E-value=27 Score=18.36 Aligned_cols=16 Identities=38% Similarity=0.987 Sum_probs=12.5
Q ss_pred CceeeeEEEeCCCeee
Q 048032 77 GYGRVYKGKLSDGRLV 92 (93)
Q Consensus 77 ~~g~VYk~~l~~g~~v 92 (93)
.++.||.|.+..|..+
T Consensus 19 a~~RV~sGtl~~g~~v 34 (94)
T cd04090 19 AFGRIYSGTIKKGQKV 34 (94)
T ss_pred EEEEEeeCeEcCCCEE
Confidence 5788999999777654
No 250
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=34.50 E-value=22 Score=22.69 Aligned_cols=21 Identities=43% Similarity=0.760 Sum_probs=15.7
Q ss_pred cccccCceeeeEEEe-CCCeee
Q 048032 72 ELGQGGYGRVYKGKL-SDGRLV 92 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l-~~g~~v 92 (93)
.||+|++|.|-+-.+ ++|...
T Consensus 53 elGrGayG~vekmrh~~sg~im 74 (282)
T KOG0984|consen 53 ELGRGAYGVVEKMRHIQSGTIM 74 (282)
T ss_pred hhcCCccchhhheeeccCCeEE
Confidence 699999999876555 566654
No 251
>cd04092 mtEFG2_II_like mtEFG2_C: C-terminus of mitochondrial Elongation factor G2 (mtEFG2)-like proteins found in eukaryotes. Eukaryotic cells harbor 2 protein synthesis systems: one localized in the cytoplasm, the other in the mitochondria. Most factors regulating mitochondrial protein synthesis are encoded by nuclear genes, translated in the cytoplasm, and then transported to the mitochondria. The eukaryotic system of elongation factor (EF) components is more complex than that in prokaryotes, with both cytoplasmic and mitochondrial elongation factors and multiple isoforms being expressed in certain species. Eukaryotic EF-2 operates in the cytosolic protein synthesis machinery of eukaryotes, EF-Gs in protein synthesis in bacteria. Eukaryotic mtEFG1 proteins show significant homology to bacterial EF-Gs. No clear phenotype has been found for mutants in the yeast homologue of mtEFG2, MEF2. There are two forms of mtEFG present in mammals (designated mtEFG1s and mtEFG2s) mtEFG1s are n
Probab=33.56 E-value=29 Score=17.65 Aligned_cols=21 Identities=33% Similarity=0.567 Sum_probs=15.5
Q ss_pred cccccCceeeeEEEeCCCeee
Q 048032 72 ELGQGGYGRVYKGKLSDGRLV 92 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~~g~~v 92 (93)
-.|+=.++.+|.|.|..|+.+
T Consensus 13 ~~g~i~~~Ri~sGtl~~g~~v 33 (83)
T cd04092 13 QRGPLTFVRVYSGTLKRGSAL 33 (83)
T ss_pred CCCeEEEEEEecCEECCCCEE
Confidence 356667788999999777654
No 252
>PF13974 YebO: YebO-like protein
Probab=32.93 E-value=23 Score=18.58 Aligned_cols=9 Identities=0% Similarity=0.294 Sum_probs=3.3
Q ss_pred HHHHHHHHh
Q 048032 6 MGIIITCAI 14 (93)
Q Consensus 6 ~~~~~~~~~ 14 (93)
+++++.+++
T Consensus 6 ~~~lv~liv 14 (80)
T PF13974_consen 6 LVLLVGLIV 14 (80)
T ss_pred HHHHHHHHH
Confidence 333333333
No 253
>PF05142 DUF702: Domain of unknown function (DUF702) ; InterPro: IPR007818 This is a family of plant proteins of unknown function.
Probab=32.89 E-value=29 Score=20.54 Aligned_cols=13 Identities=54% Similarity=1.037 Sum_probs=10.5
Q ss_pred cccccCceeeeEEEeCC
Q 048032 72 ELGQGGYGRVYKGKLSD 88 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~~ 88 (93)
.|| |+||||.|-|
T Consensus 136 ~IG----GHVFKGiLYD 148 (154)
T PF05142_consen 136 NIG----GHVFKGILYD 148 (154)
T ss_pred EEC----CEEeeeeeec
Confidence 377 9999999943
No 254
>KOG3482 consensus Small nuclear ribonucleoprotein (snRNP) SMF [RNA processing and modification]
Probab=32.35 E-value=31 Score=17.71 Aligned_cols=15 Identities=40% Similarity=0.596 Sum_probs=11.0
Q ss_pred cccccCceeeeEEEe
Q 048032 72 ELGQGGYGRVYKGKL 86 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l 86 (93)
++-+=.+|..|||.|
T Consensus 21 V~vkLKwg~eYkG~L 35 (79)
T KOG3482|consen 21 VLVKLKWGQEYKGTL 35 (79)
T ss_pred EEEEEecCcEEEEEE
Confidence 344456789999988
No 255
>cd03700 eEF2_snRNP_like_II EF2_snRNP_like_II: this subfamily represents domain II of elongation factor (EF) EF-2 found eukaryotes and archaea and, the C-terminal portion of the spliceosomal human 116kD U5 small nuclear ribonucleoprotein (snRNP) protein (U5-116 kD) and, its yeast counterpart Snu114p. During the process of peptide synthesis and tRNA site changes, the ribosome is moved along the mRNA a distance equal to one codon with the addition of each amino acid. This translocation step is catalyzed by EF-2_GTP, which is hydrolyzed to provide the required energy. Thus, this action releases the uncharged tRNA from the P site and transfers the newly formed peptidyl-tRNA from the A site to the P site. Yeast Snu114p is essential for cell viability and for splicing in vivo. U5-116 kD binds GTP. Experiments suggest that GTP binding and probably GTP hydrolysis is important for the function of the U5-116 kD/Snu114p.
Probab=31.26 E-value=33 Score=17.97 Aligned_cols=19 Identities=37% Similarity=0.775 Sum_probs=13.7
Q ss_pred cccCceeeeEEEeCCCeee
Q 048032 74 GQGGYGRVYKGKLSDGRLV 92 (93)
Q Consensus 74 G~G~~g~VYk~~l~~g~~v 92 (93)
|+=+++.||.|.|..|..+
T Consensus 16 g~la~~RV~sGtl~~g~~v 34 (93)
T cd03700 16 GFIAFGRVFSGTIRKGQKV 34 (93)
T ss_pred EEEEEEEEeeCeEeCCCEE
Confidence 4456788999999776543
No 256
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=31.03 E-value=44 Score=21.84 Aligned_cols=21 Identities=24% Similarity=0.525 Sum_probs=17.0
Q ss_pred cccccCceeeeEEEeCC-Ceee
Q 048032 72 ELGQGGYGRVYKGKLSD-GRLV 92 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~~-g~~v 92 (93)
.||.|+++.||.++-++ |+..
T Consensus 19 ~i~~g~~~~v~~v~d~~t~~~~ 40 (288)
T PF14531_consen 19 IIGKGGFSIVFEVTDVETGEEF 40 (288)
T ss_dssp EEEEETTEEEEEEEETTTTEEE
T ss_pred ccccCCceEEEEEEEccCCceE
Confidence 79999999999998754 5543
No 257
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=31.02 E-value=31 Score=22.51 Aligned_cols=14 Identities=43% Similarity=0.558 Sum_probs=12.6
Q ss_pred cccccCceeeeEEE
Q 048032 72 ELGQGGYGRVYKGK 85 (93)
Q Consensus 72 ~iG~G~~g~VYk~~ 85 (93)
.+|+|||..||.++
T Consensus 28 ~LgeGGfsfv~LV~ 41 (302)
T KOG2345|consen 28 LLGEGGFSFVDLVK 41 (302)
T ss_pred eecCCCceeeeeec
Confidence 68999999999876
No 258
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=30.96 E-value=49 Score=23.15 Aligned_cols=22 Identities=36% Similarity=0.542 Sum_probs=16.2
Q ss_pred cccccCceeeeEEEe-CCCeeeC
Q 048032 72 ELGQGGYGRVYKGKL-SDGRLVA 93 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l-~~g~~va 93 (93)
.+|+|+||.|-.|.= ..|..||
T Consensus 179 ~LGsGafg~Vkla~e~~tgk~vA 201 (475)
T KOG0615|consen 179 TLGSGAFGLVKLAYEKKTGKQVA 201 (475)
T ss_pred eecCCceeEEEEEEEcccCcEEE
Confidence 599999999987754 3555554
No 259
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=30.49 E-value=80 Score=21.17 Aligned_cols=17 Identities=35% Similarity=0.761 Sum_probs=14.6
Q ss_pred cccccCceeeeEEEeCC
Q 048032 72 ELGQGGYGRVYKGKLSD 88 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~~ 88 (93)
.+|.|..|.|.+.....
T Consensus 99 dlGsGtcG~V~k~~~rs 115 (391)
T KOG0983|consen 99 DLGSGTCGQVWKMRFRS 115 (391)
T ss_pred hhcCCCccceEEEEEcc
Confidence 68999999999987743
No 260
>PF15345 TMEM51: Transmembrane protein 51
Probab=30.49 E-value=51 Score=20.95 Aligned_cols=7 Identities=29% Similarity=0.487 Sum_probs=3.6
Q ss_pred chHHHHH
Q 048032 58 SFPNVKK 64 (93)
Q Consensus 58 ~~~~l~~ 64 (93)
+|+|++.
T Consensus 126 SYEEvv~ 132 (233)
T PF15345_consen 126 SYEEVVN 132 (233)
T ss_pred ChHHHHh
Confidence 4555543
No 261
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=30.26 E-value=37 Score=26.86 Aligned_cols=17 Identities=24% Similarity=0.499 Sum_probs=14.7
Q ss_pred cccccCceeeeEEEeCC
Q 048032 72 ELGQGGYGRVYKGKLSD 88 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~~ 88 (93)
+||+|+||.|....+.+
T Consensus 82 vIGrGaFGEV~lVr~k~ 98 (1317)
T KOG0612|consen 82 VIGRGAFGEVALVRHKS 98 (1317)
T ss_pred HhcccccceeEEEEeec
Confidence 79999999999887743
No 262
>cd03699 lepA_II lepA_II: This subfamily represents the domain II of LepA, a GTP-binding protein localized in the cytoplasmic membrane. The N-terminal domain of LepA shares regions of homology to translation factors. In terms of interaction with the ribosome, EF-G, EF-Tu and IF2 have all been demonstrated to interact at overlapping sites on the ribosome. Chemical protection studies demonstrate that they all include the universally conserved alpha-sarcin loop as part of their binding site. These data indicate that LepA may bind to this location on the ribosome as well. LepA has never been observed in archaea, and eukaryl LepA is organellar. LepA is therefore a true bacterial GTPase, found only in the bacterial lineage.
Probab=29.49 E-value=34 Score=17.60 Aligned_cols=21 Identities=29% Similarity=0.401 Sum_probs=15.7
Q ss_pred cccccCceeeeEEEeCCCeee
Q 048032 72 ELGQGGYGRVYKGKLSDGRLV 92 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~~g~~v 92 (93)
-.|+=.++.+|.|.+..|+.+
T Consensus 13 ~~G~i~~~Rv~sG~l~~~~~v 33 (86)
T cd03699 13 YRGVIALVRVFDGTLKKGDKI 33 (86)
T ss_pred CCCEEEEEEEEcCEEcCCCEE
Confidence 456667889999999776654
No 263
>PRK15449 ferredoxin-like protein FixX; Provisional
Probab=29.35 E-value=33 Score=18.55 Aligned_cols=11 Identities=18% Similarity=0.637 Sum_probs=8.7
Q ss_pred ccccCceeeeE
Q 048032 73 LGQGGYGRVYK 83 (93)
Q Consensus 73 iG~G~~g~VYk 83 (93)
--+|+||..||
T Consensus 83 yPrgg~GV~yr 93 (95)
T PRK15449 83 YPRGTFGVEFR 93 (95)
T ss_pred CCCCCcCEEEe
Confidence 45789998886
No 264
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=29.32 E-value=62 Score=20.42 Aligned_cols=16 Identities=6% Similarity=-0.230 Sum_probs=13.4
Q ss_pred cccccCceeeeEEEeC
Q 048032 72 ELGQGGYGRVYKGKLS 87 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~ 87 (93)
++|.|+||.||.....
T Consensus 38 ~l~~~~f~~v~l~~~~ 53 (232)
T PRK10359 38 VFRNIDDTKVSLIDTD 53 (232)
T ss_pred EecCCCceEEEEEecC
Confidence 6999999999986553
No 265
>PHA03286 envelope glycoprotein E; Provisional
Probab=29.06 E-value=29 Score=24.29 Aligned_cols=11 Identities=36% Similarity=0.565 Sum_probs=5.5
Q ss_pred eeeEEEeCCCe
Q 048032 80 RVYKGKLSDGR 90 (93)
Q Consensus 80 ~VYk~~l~~g~ 90 (93)
.-|-+-|.+|.
T Consensus 472 ~~~~~~~~~~~ 482 (492)
T PHA03286 472 SRYHAWLADGG 482 (492)
T ss_pred chhhhhhhcCC
Confidence 34555555543
No 266
>PF15176 LRR19-TM: Leucine-rich repeat family 19 TM domain
Probab=28.26 E-value=33 Score=18.82 Aligned_cols=11 Identities=9% Similarity=0.268 Sum_probs=3.9
Q ss_pred HHHHHHHHHhh
Q 048032 5 MMGIIITCAII 15 (93)
Q Consensus 5 ~~~~~~~~~~~ 15 (93)
+.++++.++++
T Consensus 25 ~~al~~SlLIa 35 (102)
T PF15176_consen 25 VTALVTSLLIA 35 (102)
T ss_pred HHHHHHHHHHH
Confidence 33333333333
No 267
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=28.24 E-value=17 Score=25.41 Aligned_cols=28 Identities=18% Similarity=0.553 Sum_probs=20.7
Q ss_pred eechHHHHHHhcchhccccccCceeeeEEEeCC
Q 048032 56 RYSFPNVKKMTNSFKDELGQGGYGRVYKGKLSD 88 (93)
Q Consensus 56 ~~~~~~l~~at~~f~~~iG~G~~g~VYk~~l~~ 88 (93)
.|+.+|.+ |.+.||+|....||-+.+++
T Consensus 153 kFtiddye-----iG~~igkGC~AaVY~A~~~~ 180 (598)
T KOG4158|consen 153 KFTIDDYE-----IGEFIGKGCNAAVYSARLAN 180 (598)
T ss_pred ccchhhhc-----ccchhhccchhhhhhhhcCC
Confidence 46655543 34579999999999999864
No 268
>PF11395 DUF2873: Protein of unknown function (DUF2873); InterPro: IPR021532 This entry is represented by the human SARS coronavirus, Orf7b; it is a family of uncharacterised viral proteins.
Probab=27.94 E-value=54 Score=14.50 Aligned_cols=9 Identities=22% Similarity=0.124 Sum_probs=3.8
Q ss_pred HHHHhhhee
Q 048032 10 ITCAIICIF 18 (93)
Q Consensus 10 ~~~~~~~~~ 18 (93)
++.+++|+.
T Consensus 23 imliif~f~ 31 (43)
T PF11395_consen 23 IMLIIFWFS 31 (43)
T ss_pred HHHHHHHHH
Confidence 334444443
No 269
>PRK10905 cell division protein DamX; Validated
Probab=27.65 E-value=53 Score=21.97 Aligned_cols=9 Identities=22% Similarity=0.877 Sum_probs=3.5
Q ss_pred hHHHHHHHH
Q 048032 2 GAGMMGIII 10 (93)
Q Consensus 2 g~~~~~~~~ 10 (93)
|+.++++++
T Consensus 3 GiGilVLlL 11 (328)
T PRK10905 3 GVGILVLLL 11 (328)
T ss_pred chhHHHHHH
Confidence 443333333
No 270
>PF07423 DUF1510: Protein of unknown function (DUF1510); InterPro: IPR009988 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown.
Probab=26.27 E-value=66 Score=20.22 Aligned_cols=21 Identities=14% Similarity=0.313 Sum_probs=12.3
Q ss_pred chHHHHHHhcc---hhc------cccccCc
Q 048032 58 SFPNVKKMTNS---FKD------ELGQGGY 78 (93)
Q Consensus 58 ~~~~l~~at~~---f~~------~iG~G~~ 78 (93)
+..|+.+|... .++ .||.||-
T Consensus 151 DW~Em~~Ais~atgi~~~~mi~w~ign~G~ 180 (217)
T PF07423_consen 151 DWNEMLKAISYATGISEDNMIVWFIGNNGS 180 (217)
T ss_pred CHHHHHHHHHHhhCCChhheEEEhhhcCCc
Confidence 46677777532 221 2788876
No 271
>PRK11901 hypothetical protein; Reviewed
Probab=25.90 E-value=50 Score=22.10 Aligned_cols=10 Identities=20% Similarity=0.717 Sum_probs=3.8
Q ss_pred hHHHHHHHHH
Q 048032 2 GAGMMGIIIT 11 (93)
Q Consensus 2 g~~~~~~~~~ 11 (93)
|+.+++++++
T Consensus 41 GiGilVLlLL 50 (327)
T PRK11901 41 GIGILVLLLL 50 (327)
T ss_pred HHHHHHHHHH
Confidence 3333333333
No 272
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=24.98 E-value=1.1e+02 Score=17.31 Aligned_cols=30 Identities=10% Similarity=0.287 Sum_probs=19.9
Q ss_pred CCceechHHHHHHhcchhc--cccccCceeee
Q 048032 53 APKRYSFPNVKKMTNSFKD--ELGQGGYGRVY 82 (93)
Q Consensus 53 ~~~~~~~~~l~~at~~f~~--~iG~G~~g~VY 82 (93)
..+.++.+|+......=.+ ++|.|-+|.+-
T Consensus 45 TSHkl~~eEle~~lee~~E~ivvGTG~~G~l~ 76 (121)
T COG1504 45 TSHKLALEELEELLEEGPEVIVVGTGQSGMLE 76 (121)
T ss_pred cccccCHHHHHHHHhcCCcEEEEecCceeEEE
Confidence 3466777787766542223 68999999774
No 273
>cd03689 RF3_II RF3_II: this subfamily represents the domain II of bacterial Release Factor 3 (RF3). Termination of protein synthesis by the ribosome requires two release factor (RF) classes. The class II RF3 is a GTPase that removes class I RFs (RF1 or RF2) from the ribosome after release of the nascent polypeptide. RF3 in the GDP state binds to the ribosomal class I RF complex, followed by an exchange of GDP for GTP and release of the class I RF. Sequence comparison of class II release factors with elongation factors shows that prokaryotic RF3 is more similar to EF-G whereas eukaryotic eRF3 is more similar to eEF1A, implying that their precise function may differ.
Probab=24.23 E-value=42 Score=17.35 Aligned_cols=20 Identities=30% Similarity=0.381 Sum_probs=14.4
Q ss_pred ccccCceeeeEEEeCCCeee
Q 048032 73 LGQGGYGRVYKGKLSDGRLV 92 (93)
Q Consensus 73 iG~G~~g~VYk~~l~~g~~v 92 (93)
.|+=.++.+|.|.+..|..+
T Consensus 15 ~Gkla~~Rv~sG~l~~g~~v 34 (85)
T cd03689 15 RDRIAFVRVCSGKFERGMKV 34 (85)
T ss_pred CcEEEEEEEECCEEcCCCEE
Confidence 46667788888888766654
No 274
>COG3761 NADH:ubiquinone oxidoreductase 17.2 kD subunit [Energy production and conversion]
Probab=23.81 E-value=34 Score=18.88 Aligned_cols=15 Identities=33% Similarity=0.884 Sum_probs=12.3
Q ss_pred hhccccccCceeeeE
Q 048032 69 FKDELGQGGYGRVYK 83 (93)
Q Consensus 69 f~~~iG~G~~g~VYk 83 (93)
|.+.+|+..||.+|.
T Consensus 12 fh~kvGeDefgN~Yy 26 (118)
T COG3761 12 FHKKVGEDEFGNVYY 26 (118)
T ss_pred HHHhccchhccceee
Confidence 556789999999985
No 275
>COG3190 FliO Flagellar biogenesis protein [Cell motility and secretion]
Probab=23.63 E-value=50 Score=19.21 Aligned_cols=18 Identities=0% Similarity=0.076 Sum_probs=8.1
Q ss_pred HHHHHHHHHHhhheeeec
Q 048032 4 GMMGIIITCAIICIFRKK 21 (93)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~ 21 (93)
+++++.++++.+|.++|.
T Consensus 31 L~~iL~lil~~~wl~kr~ 48 (137)
T COG3190 31 LILILALILFLAWLVKRL 48 (137)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 333444444445555444
No 276
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=22.83 E-value=61 Score=24.89 Aligned_cols=21 Identities=43% Similarity=0.974 Sum_probs=16.0
Q ss_pred hccccccCceeeeEEEe-CCCe
Q 048032 70 KDELGQGGYGRVYKGKL-SDGR 90 (93)
Q Consensus 70 ~~~iG~G~~g~VYk~~l-~~g~ 90 (93)
-++||.|.+|.|||+.= .+|+
T Consensus 24 ~evig~Gtygkv~k~k~~~~~~ 45 (953)
T KOG0587|consen 24 IEVIGNGTYGKVYKGRHVKTGQ 45 (953)
T ss_pred EEEEeeccceeEEEEeeeecCc
Confidence 34799999999999864 3444
No 277
>PHA03240 envelope glycoprotein M; Provisional
Probab=22.28 E-value=65 Score=20.38 Aligned_cols=7 Identities=29% Similarity=0.629 Sum_probs=2.6
Q ss_pred HHhhhee
Q 048032 12 CAIICIF 18 (93)
Q Consensus 12 ~~~~~~~ 18 (93)
+++++++
T Consensus 225 IIIL~cf 231 (258)
T PHA03240 225 VIILFFF 231 (258)
T ss_pred HHHHHHH
Confidence 3333333
No 278
>PRK14051 negative regulator GrlR; Provisional
Probab=22.16 E-value=67 Score=17.95 Aligned_cols=18 Identities=33% Similarity=0.586 Sum_probs=15.0
Q ss_pred cccccCceeeeEEEeCCC
Q 048032 72 ELGQGGYGRVYKGKLSDG 89 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~~g 89 (93)
+|--|.++.+|.|.+.+.
T Consensus 30 kInGGD~~~~YqG~isEd 47 (123)
T PRK14051 30 MITGGDIASVYQGVLSED 47 (123)
T ss_pred EecCCccceEEecccccc
Confidence 677889999999998654
No 279
>PF15569 Imm21: Immunity protein 21
Probab=22.03 E-value=1.5e+02 Score=16.01 Aligned_cols=24 Identities=42% Similarity=0.742 Sum_probs=16.5
Q ss_pred eechHHHHHHhcchhc----cccccCceeeeE
Q 048032 56 RYSFPNVKKMTNSFKD----ELGQGGYGRVYK 83 (93)
Q Consensus 56 ~~~~~~l~~at~~f~~----~iG~G~~g~VYk 83 (93)
.++++|.++..+-+.+ ++| |-||+
T Consensus 11 A~~~~dal~ii~~~~~~~i~ILG----GDVY~ 38 (91)
T PF15569_consen 11 AYPFQDALKIINICEEKNIPILG----GDVYK 38 (91)
T ss_pred ecCHHHHHHHHHHHHhcCceEEc----ceEEE
Confidence 4667777777665544 578 88994
No 280
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=21.28 E-value=53 Score=23.24 Aligned_cols=24 Identities=42% Similarity=0.655 Sum_probs=17.3
Q ss_pred hccccccCceeeeEEEe-CCCeeeC
Q 048032 70 KDELGQGGYGRVYKGKL-SDGRLVA 93 (93)
Q Consensus 70 ~~~iG~G~~g~VYk~~l-~~g~~va 93 (93)
.+.+|+|.||.|-++.- ..|..||
T Consensus 58 ~etLGkGTYGKVk~A~e~~sgR~VA 82 (668)
T KOG0611|consen 58 TETLGKGTYGKVKLAYEHKSGREVA 82 (668)
T ss_pred HHHhcCCcccceeehhhccCCcEee
Confidence 34789999999987754 4566554
No 281
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=21.17 E-value=13 Score=24.29 Aligned_cols=15 Identities=33% Similarity=0.658 Sum_probs=12.8
Q ss_pred ccccccCceeeeEEE
Q 048032 71 DELGQGGYGRVYKGK 85 (93)
Q Consensus 71 ~~iG~G~~g~VYk~~ 85 (93)
++||+|.|+.||+..
T Consensus 17 e~igkG~FSvVrRc~ 31 (355)
T KOG0033|consen 17 EELGKGAFSVVRRCV 31 (355)
T ss_pred HHHccCchHHHHHHH
Confidence 489999999999864
No 282
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=21.15 E-value=70 Score=25.89 Aligned_cols=19 Identities=32% Similarity=0.639 Sum_probs=15.1
Q ss_pred cccccCceeeeEEEeC-CCe
Q 048032 72 ELGQGGYGRVYKGKLS-DGR 90 (93)
Q Consensus 72 ~iG~G~~g~VYk~~l~-~g~ 90 (93)
.||.|.||.||-+.-+ +|.
T Consensus 1242 ~Ig~G~fG~VYtavN~~tGe 1261 (1509)
T KOG4645|consen 1242 FIGGGTFGKVYTAVNLDTGE 1261 (1509)
T ss_pred ccCCcceeeeEEeecCCccc
Confidence 5999999999987653 454
Done!