Query 048036
Match_columns 472
No_of_seqs 363 out of 2398
Neff 7.3
Searched_HMMs 46136
Date Fri Mar 29 05:39:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048036.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/048036hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1378 Purple acid phosphatas 100.0 6.4E-69 1.4E-73 546.4 34.8 375 5-467 8-446 (452)
2 PLN02533 probable purple acid 100.0 3.9E-67 8.5E-72 547.9 39.4 331 43-461 40-421 (427)
3 cd00839 MPP_PAPs purple acid p 100.0 2.8E-39 6.1E-44 322.9 24.5 229 168-458 3-294 (294)
4 PTZ00422 glideosome-associated 100.0 1.6E-27 3.5E-32 243.2 25.0 216 169-460 26-331 (394)
5 cd07378 MPP_ACP5 Homo sapiens 99.9 1E-24 2.2E-29 216.2 21.1 206 170-443 1-275 (277)
6 KOG2679 Purple (tartrate-resis 99.9 9.5E-22 2.1E-26 187.1 19.5 220 168-459 42-330 (336)
7 cd07395 MPP_CSTP1 Homo sapiens 99.9 1.2E-20 2.6E-25 185.8 19.5 167 168-362 3-236 (262)
8 PF09423 PhoD: PhoD-like phosp 99.8 8.6E-17 1.9E-21 170.6 25.9 141 122-264 60-207 (453)
9 cd07402 MPP_GpdQ Enterobacter 99.8 9.4E-18 2E-22 162.5 16.7 155 171-363 1-213 (240)
10 cd07399 MPP_YvnB Bacillus subt 99.8 7.2E-18 1.6E-22 161.5 15.3 143 170-341 1-166 (214)
11 cd07396 MPP_Nbla03831 Homo sap 99.7 1.5E-17 3.3E-22 164.4 15.1 160 170-362 1-246 (267)
12 PRK11148 cyclic 3',5'-adenosin 99.7 1.6E-16 3.4E-21 157.9 20.8 156 169-362 14-225 (275)
13 cd07401 MPP_TMEM62_N Homo sapi 99.7 1.3E-16 2.7E-21 157.0 14.2 153 172-342 2-216 (256)
14 COG3540 PhoD Phosphodiesterase 99.7 3.3E-16 7.1E-21 159.9 14.0 189 55-264 45-245 (522)
15 cd07383 MPP_Dcr2 Saccharomyces 99.7 1.8E-15 4E-20 143.0 15.2 147 169-341 2-181 (199)
16 PF00149 Metallophos: Calcineu 99.6 9.7E-16 2.1E-20 136.2 11.5 140 170-336 1-200 (200)
17 cd07393 MPP_DR1119 Deinococcus 99.5 2.4E-13 5.2E-18 131.8 13.9 80 273-360 145-226 (232)
18 PF14008 Metallophos_C: Iron/z 99.5 6E-14 1.3E-18 107.7 6.4 43 410-454 20-62 (62)
19 cd07400 MPP_YydB Bacillus subt 99.4 1.8E-12 3.9E-17 115.8 13.0 128 172-359 1-144 (144)
20 cd08163 MPP_Cdc1 Saccharomyces 99.4 3E-12 6.5E-17 125.9 12.4 134 186-339 35-231 (257)
21 cd07385 MPP_YkuE_C Bacillus su 99.4 4E-12 8.7E-17 121.7 12.5 134 169-343 1-173 (223)
22 cd07392 MPP_PAE1087 Pyrobaculu 99.4 6E-12 1.3E-16 116.7 12.8 133 172-337 1-174 (188)
23 cd00842 MPP_ASMase acid sphing 99.3 9.8E-12 2.1E-16 124.6 12.7 147 174-339 42-264 (296)
24 cd07404 MPP_MS158 Microscilla 99.3 2.6E-12 5.7E-17 117.7 7.7 132 172-338 1-151 (166)
25 TIGR03729 acc_ester putative p 99.3 4.2E-11 9.2E-16 116.5 13.2 136 171-337 1-222 (239)
26 cd00840 MPP_Mre11_N Mre11 nucl 99.3 5.7E-11 1.2E-15 113.3 13.5 144 171-339 1-204 (223)
27 cd07388 MPP_Tt1561 Thermus the 99.3 5.3E-11 1.1E-15 114.5 12.8 136 169-334 4-189 (224)
28 COG1409 Icc Predicted phosphoh 99.3 7.5E-11 1.6E-15 116.8 14.2 142 170-336 1-193 (301)
29 KOG1432 Predicted DNA repair e 99.2 4.9E-10 1.1E-14 111.0 18.7 73 169-264 53-147 (379)
30 PRK11340 phosphodiesterase Yae 99.2 6.3E-11 1.4E-15 117.6 12.1 72 169-264 49-125 (271)
31 cd00838 MPP_superfamily metall 99.1 3.4E-10 7.4E-15 97.1 10.5 111 173-340 1-119 (131)
32 cd07397 MPP_DevT Myxococcus xa 99.1 1.4E-09 3.1E-14 105.1 14.3 63 170-264 1-63 (238)
33 cd07379 MPP_239FB Homo sapiens 99.1 7.8E-10 1.7E-14 98.0 11.1 112 171-337 1-117 (135)
34 PF12850 Metallophos_2: Calcin 99.1 1.4E-10 3.1E-15 104.1 6.3 137 170-363 1-140 (156)
35 TIGR03767 P_acnes_RR metalloph 99.0 2.3E-09 5E-14 112.1 13.9 65 271-339 320-395 (496)
36 cd00841 MPP_YfcE Escherichia c 98.9 6.2E-09 1.3E-13 94.1 9.8 130 171-363 1-133 (155)
37 TIGR00040 yfcE phosphoesterase 98.9 1.9E-08 4.1E-13 91.5 12.4 133 170-362 1-136 (158)
38 COG1408 Predicted phosphohydro 98.9 2.2E-08 4.7E-13 99.9 13.8 72 169-264 44-118 (284)
39 cd08165 MPP_MPPE1 human MPPE1 98.8 2E-08 4.3E-13 91.6 10.5 99 192-339 35-137 (156)
40 COG2129 Predicted phosphoester 98.8 5.7E-08 1.2E-12 92.0 13.5 142 169-337 3-188 (226)
41 cd07394 MPP_Vps29 Homo sapiens 98.8 1.5E-07 3.3E-12 87.6 15.2 131 171-363 1-137 (178)
42 cd07403 MPP_TTHA0053 Thermus t 98.8 3.4E-08 7.4E-13 87.1 9.0 100 173-339 1-106 (129)
43 cd08166 MPP_Cdc1_like_1 unchar 98.7 1.2E-07 2.7E-12 89.0 12.1 107 193-339 40-150 (195)
44 PRK05340 UDP-2,3-diacylglucosa 98.7 8E-08 1.7E-12 93.7 11.1 76 170-264 1-83 (241)
45 TIGR00583 mre11 DNA repair pro 98.7 8.2E-07 1.8E-11 92.7 18.6 39 169-207 3-54 (405)
46 PRK09453 phosphodiesterase; Pr 98.7 2.6E-07 5.7E-12 86.1 12.5 143 170-363 1-149 (182)
47 COG1768 Predicted phosphohydro 98.6 1.2E-07 2.7E-12 86.1 9.0 58 292-357 159-217 (230)
48 PF14582 Metallophos_3: Metall 98.6 1.7E-07 3.8E-12 88.6 9.7 155 170-337 6-219 (255)
49 cd07384 MPP_Cdc1_like Saccharo 98.6 3.5E-07 7.6E-12 84.6 10.9 100 193-340 43-150 (171)
50 TIGR01854 lipid_A_lpxH UDP-2,3 98.6 5.7E-07 1.2E-11 87.1 12.1 73 173-264 2-81 (231)
51 cd08164 MPP_Ted1 Saccharomyces 98.4 1.3E-06 2.8E-11 82.0 8.7 110 186-340 34-160 (193)
52 cd00845 MPP_UshA_N_like Escher 98.3 4.6E-06 9.9E-11 81.5 9.9 38 170-207 1-49 (252)
53 cd07410 MPP_CpdB_N Escherichia 98.2 1E-05 2.2E-10 80.5 12.0 57 277-337 173-231 (277)
54 cd07406 MPP_CG11883_N Drosophi 98.2 8E-06 1.7E-10 80.5 9.3 54 289-362 170-225 (257)
55 COG0622 Predicted phosphoester 98.1 1.9E-05 4.2E-10 73.0 10.9 135 170-362 2-139 (172)
56 cd07398 MPP_YbbF-LpxH Escheric 98.1 5.2E-06 1.1E-10 79.0 6.6 75 173-264 1-82 (217)
57 cd07391 MPP_PF1019 Pyrococcus 98.0 1.1E-05 2.5E-10 74.4 7.2 69 173-263 1-87 (172)
58 cd07390 MPP_AQ1575 Aquifex aeo 98.0 1.5E-05 3.1E-10 73.5 7.6 33 293-339 108-140 (168)
59 cd07424 MPP_PrpA_PrpB PrpA and 98.0 3.4E-05 7.5E-10 73.4 9.8 37 171-207 2-40 (207)
60 cd07408 MPP_SA0022_N Staphyloc 98.0 4.7E-05 1E-09 74.9 10.9 45 289-339 170-216 (257)
61 COG0420 SbcD DNA repair exonuc 97.9 1.7E-05 3.8E-10 82.7 7.4 73 170-264 1-88 (390)
62 TIGR00619 sbcd exonuclease Sbc 97.9 2.7E-05 5.8E-10 76.6 7.7 73 170-264 1-88 (253)
63 KOG3770 Acid sphingomyelinase 97.9 0.0001 2.3E-09 78.6 12.4 64 271-337 339-405 (577)
64 cd07411 MPP_SoxB_N Thermus the 97.9 8.9E-05 1.9E-09 73.3 10.9 56 290-362 183-240 (264)
65 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.9 0.00033 7.1E-09 69.3 14.5 81 172-264 1-86 (262)
66 TIGR03768 RPA4764 metallophosp 97.8 2.6E-05 5.5E-10 81.5 6.3 64 271-336 329-411 (492)
67 COG2908 Uncharacterized protei 97.8 2.3E-05 5E-10 75.1 5.1 72 174-264 2-80 (237)
68 PRK09968 serine/threonine-spec 97.8 0.00011 2.4E-09 70.6 9.3 37 171-207 16-54 (218)
69 PRK04036 DNA polymerase II sma 97.8 0.00017 3.6E-09 77.9 11.6 86 168-263 242-342 (504)
70 cd07382 MPP_DR1281 Deinococcus 97.8 0.00065 1.4E-08 66.8 14.6 74 277-364 128-202 (255)
71 PRK10966 exonuclease subunit S 97.7 9E-05 2E-09 77.8 8.6 73 170-264 1-87 (407)
72 cd07425 MPP_Shelphs Shewanella 97.7 7E-05 1.5E-09 71.5 7.1 70 173-264 1-80 (208)
73 PHA02546 47 endonuclease subun 97.7 0.0001 2.3E-09 75.6 8.3 74 170-264 1-89 (340)
74 cd07412 MPP_YhcR_N Bacillus su 97.7 0.00051 1.1E-08 68.8 12.6 81 278-363 179-263 (288)
75 PRK09419 bifunctional 2',3'-cy 97.7 0.00039 8.4E-09 82.4 13.4 40 168-207 659-703 (1163)
76 cd07409 MPP_CD73_N CD73 ecto-5 97.6 0.00028 6E-09 70.5 10.1 49 277-337 169-219 (281)
77 cd07407 MPP_YHR202W_N Saccharo 97.5 0.0018 3.9E-08 64.8 13.7 73 276-363 176-251 (282)
78 cd07380 MPP_CWF19_N Schizosacc 97.4 0.00072 1.6E-08 61.2 8.7 113 173-344 1-130 (150)
79 TIGR00282 metallophosphoestera 97.4 0.0055 1.2E-07 60.6 14.7 73 278-364 132-205 (266)
80 cd07405 MPP_UshA_N Escherichia 97.3 0.0018 3.9E-08 64.8 10.6 47 290-337 173-222 (285)
81 TIGR01530 nadN NAD pyrophospha 97.2 0.0013 2.8E-08 71.9 9.1 35 291-337 183-219 (550)
82 COG0737 UshA 5'-nucleotidase/2 97.2 0.004 8.6E-08 67.6 12.6 61 274-336 187-247 (517)
83 PRK09558 ushA bifunctional UDP 97.1 0.0026 5.6E-08 69.6 10.5 47 290-337 209-258 (551)
84 PRK11907 bifunctional 2',3'-cy 97.1 0.0044 9.6E-08 70.1 12.5 44 290-336 309-354 (814)
85 PRK09418 bifunctional 2',3'-cy 97.1 0.0083 1.8E-07 67.8 14.4 45 290-337 244-290 (780)
86 TIGR01390 CycNucDiestase 2',3' 97.0 0.0053 1.2E-07 68.1 11.3 44 290-336 195-240 (626)
87 cd07389 MPP_PhoD Bacillus subt 96.9 0.0015 3.3E-08 62.7 5.9 94 171-264 1-102 (228)
88 KOG3662 Cell division control 96.9 0.0031 6.8E-08 65.3 8.2 75 169-264 48-144 (410)
89 PHA02239 putative protein phos 96.8 0.0024 5.3E-08 62.1 6.5 70 170-264 1-73 (235)
90 PRK09420 cpdB bifunctional 2', 96.8 0.0073 1.6E-07 67.2 11.0 44 290-336 218-263 (649)
91 cd07423 MPP_PrpE Bacillus subt 96.8 0.0027 5.9E-08 61.6 6.8 68 171-264 2-80 (234)
92 PRK00166 apaH diadenosine tetr 96.8 0.0021 4.6E-08 64.0 5.8 66 171-264 2-69 (275)
93 PRK13625 bis(5'-nucleosyl)-tet 96.8 0.0034 7.3E-08 61.5 6.9 68 171-264 2-79 (245)
94 COG4186 Predicted phosphoester 96.7 0.015 3.3E-07 52.3 10.2 127 171-335 5-147 (186)
95 cd07386 MPP_DNA_pol_II_small_a 96.7 0.0035 7.7E-08 61.0 6.6 81 173-263 2-93 (243)
96 TIGR00024 SbcD_rel_arch putati 96.6 0.0052 1.1E-07 59.4 7.2 69 170-263 15-101 (225)
97 PRK09419 bifunctional 2',3'-cy 96.5 0.015 3.2E-07 69.1 11.5 47 289-337 233-281 (1163)
98 COG1311 HYS2 Archaeal DNA poly 96.5 0.021 4.6E-07 60.0 10.8 87 168-264 224-321 (481)
99 KOG2310 DNA repair exonuclease 96.4 0.039 8.5E-07 58.6 12.0 41 169-209 13-66 (646)
100 PRK11439 pphA serine/threonine 96.4 0.0044 9.5E-08 59.5 4.7 37 171-207 18-56 (218)
101 cd07413 MPP_PA3087 Pseudomonas 96.2 0.0074 1.6E-07 58.2 5.6 67 172-264 1-76 (222)
102 PF00041 fn3: Fibronectin type 96.1 0.032 7E-07 43.9 7.7 76 46-147 2-77 (85)
103 cd07422 MPP_ApaH Escherichia c 96.0 0.0078 1.7E-07 59.3 4.5 64 173-264 2-67 (257)
104 cd08162 MPP_PhoA_N Synechococc 96.0 0.061 1.3E-06 54.6 11.1 38 170-207 1-50 (313)
105 cd00144 MPP_PPP_family phospho 95.8 0.012 2.6E-07 56.1 5.0 35 173-207 1-36 (225)
106 cd07421 MPP_Rhilphs Rhilph pho 95.7 0.02 4.4E-07 57.2 6.1 37 171-207 3-46 (304)
107 TIGR00668 apaH bis(5'-nucleosy 95.3 0.023 5E-07 56.5 5.0 37 171-207 2-40 (279)
108 COG1407 Predicted ICC-like pho 94.8 0.077 1.7E-06 51.3 6.6 72 171-264 21-110 (235)
109 COG1692 Calcineurin-like phosp 94.5 0.8 1.7E-05 44.5 12.6 151 170-362 1-202 (266)
110 cd07420 MPP_RdgC Drosophila me 93.5 0.13 2.8E-06 52.3 5.8 34 171-207 52-90 (321)
111 cd07416 MPP_PP2B PP2B, metallo 93.2 0.14 3E-06 51.8 5.3 37 171-207 44-81 (305)
112 smart00156 PP2Ac Protein phosp 93.1 0.15 3.3E-06 50.7 5.4 37 171-207 29-66 (271)
113 PF13277 YmdB: YmdB-like prote 93.0 0.96 2.1E-05 44.3 10.5 75 276-364 125-200 (253)
114 cd07414 MPP_PP1_PPKL PP1, PPKL 92.2 0.21 4.6E-06 50.3 5.1 37 171-207 51-88 (293)
115 KOG3325 Membrane coat complex 92.2 4.8 0.0001 36.2 12.8 125 172-361 3-136 (183)
116 cd07418 MPP_PP7 PP7, metalloph 92.1 0.29 6.4E-06 50.8 6.1 34 171-207 67-105 (377)
117 cd07415 MPP_PP2A_PP4_PP6 PP2A, 92.1 0.2 4.4E-06 50.1 4.8 37 171-207 43-80 (285)
118 PTZ00239 serine/threonine prot 91.6 0.27 5.8E-06 49.7 5.1 37 171-207 44-81 (303)
119 TIGR03768 RPA4764 metallophosp 91.2 0.53 1.2E-05 49.9 6.9 17 248-264 154-170 (492)
120 PTZ00480 serine/threonine-prot 90.7 0.37 8.1E-06 49.0 5.1 37 171-207 60-97 (320)
121 PF09587 PGA_cap: Bacterial ca 90.5 0.52 1.1E-05 46.0 5.8 63 275-339 169-231 (250)
122 KOG0196 Tyrosine kinase, EPH ( 89.9 2.2 4.7E-05 48.0 10.3 99 38-162 434-537 (996)
123 cd07381 MPP_CapA CapA and rela 89.9 0.54 1.2E-05 45.5 5.3 60 277-338 162-221 (239)
124 cd07419 MPP_Bsu1_C Arabidopsis 89.7 0.69 1.5E-05 47.0 6.1 12 253-264 116-127 (311)
125 cd00063 FN3 Fibronectin type 3 89.6 3.7 8E-05 31.3 9.1 23 125-147 56-78 (93)
126 cd07417 MPP_PP5_C PP5, C-termi 89.5 0.61 1.3E-05 47.4 5.5 34 171-207 61-99 (316)
127 smart00854 PGA_cap Bacterial c 89.4 0.55 1.2E-05 45.6 5.0 59 279-339 162-220 (239)
128 PTZ00244 serine/threonine-prot 89.4 0.42 9.1E-06 48.1 4.2 36 172-207 54-90 (294)
129 KOG4419 5' nucleotidase [Nucle 87.7 1.3 2.8E-05 48.1 6.7 54 273-335 211-268 (602)
130 KOG3947 Phosphoesterases [Gene 86.8 1.1 2.3E-05 44.3 5.0 33 169-207 61-94 (305)
131 KOG2863 RNA lariat debranching 83.9 1.7 3.6E-05 44.5 4.9 83 170-264 1-88 (456)
132 KOG4221 Receptor mediating net 83.4 2.8 6.1E-05 49.0 7.0 90 43-160 615-711 (1381)
133 smart00060 FN3 Fibronectin typ 83.0 9.5 0.00021 27.9 8.0 22 125-146 56-77 (83)
134 cd07387 MPP_PolD2_C PolD2 (DNA 82.8 3.5 7.6E-05 40.7 6.7 28 237-264 80-107 (257)
135 PF04042 DNA_pol_E_B: DNA poly 72.7 3 6.6E-05 39.2 2.9 81 172-264 1-91 (209)
136 KOG4221 Receptor mediating net 58.2 94 0.002 37.1 11.3 37 125-161 573-612 (1381)
137 PTZ00235 DNA polymerase epsilo 56.5 67 0.0015 32.3 8.8 79 169-263 27-121 (291)
138 COG5555 Cytolysin, a secreted 49.1 27 0.00059 34.9 4.7 29 274-303 253-281 (392)
139 KOG3513 Neural cell adhesion m 48.1 88 0.0019 36.9 9.2 24 124-147 875-898 (1051)
140 KOG0371 Serine/threonine prote 47.7 23 0.00049 34.9 3.8 34 172-207 62-98 (319)
141 KOG0372 Serine/threonine speci 45.2 32 0.00069 33.7 4.3 33 172-207 45-81 (303)
142 KOG4258 Insulin/growth factor 44.4 91 0.002 35.8 8.3 123 45-178 487-623 (1025)
143 KOG0374 Serine/threonine speci 42.8 24 0.00052 36.2 3.4 34 172-207 61-98 (331)
144 PF07353 Uroplakin_II: Uroplak 38.0 36 0.00078 31.0 3.3 39 125-163 101-141 (184)
145 cd02852 Isoamylase_N_term Isoa 34.6 48 0.001 28.2 3.6 23 123-145 48-70 (119)
146 cd02856 Glycogen_debranching_e 34.0 51 0.0011 27.3 3.6 23 123-145 44-66 (103)
147 PF09294 Interfer-bind: Interf 32.5 42 0.00091 27.5 2.8 20 126-145 67-86 (106)
148 cd02853 MTHase_N_term Maltooli 32.4 54 0.0012 26.1 3.3 21 124-145 40-60 (85)
149 KOG0373 Serine/threonine speci 30.5 80 0.0017 30.5 4.5 33 172-207 48-84 (306)
150 cd02860 Pullulanase_N_term Pul 30.2 60 0.0013 26.6 3.4 24 123-146 46-69 (100)
151 KOG2476 Uncharacterized conser 23.7 1.9E+02 0.0042 31.0 6.2 37 169-207 5-46 (528)
152 PF10179 DUF2369: Uncharacteri 21.2 99 0.0021 31.3 3.5 22 126-147 260-281 (300)
153 PF10179 DUF2369: Uncharacteri 20.9 82 0.0018 31.9 2.8 21 126-146 15-35 (300)
154 PHA03008 hypothetical protein; 20.8 1.4E+02 0.003 28.3 4.1 41 295-337 164-205 (234)
155 KOG3513 Neural cell adhesion m 20.2 3.7E+02 0.008 31.9 8.1 95 43-164 614-716 (1051)
No 1
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.4e-69 Score=546.42 Aligned_cols=375 Identities=39% Similarity=0.613 Sum_probs=304.5
Q ss_pred CCccccCCCCcccccCCCCCCCCCCCCCCCCcccccccCCCCCceEEEEecCCCCeeEEEEEcCCCcccCCCCCCCCCCC
Q 048036 5 IPTTLDGPFKPVTIPLDKSFRGNAIDLPDTDPRVQRTVEGFEPEQISVSLSSTHDSVWISWITGEFQIGNNIKPLDPKII 84 (472)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~qv~Lt~~~d~~s~~V~W~T~~~~~g~~~~~~~~~~~ 84 (472)
.+..+-|+......++.+++.-....++...|+ ....|+||||++++..++|+|+|.|.+..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~peQvhlS~~~~~~~m~VswvT~~~~------------- 69 (452)
T KOG1378|consen 8 QSEINPKHTLHDINPLPGTLHLLSESEQLTFPS-----VVNSPEQVHLSFTDNLNEMRVSWVTGDGE------------- 69 (452)
T ss_pred eeeccCCCccccccccCcccccccccccccCcc-----cCCCCCeEEEeccCCCCcEEEEEeCCCCC-------------
Confidence 455667777788888888776666565554444 34569999999999888999999998752
Q ss_pred CcEEEEeccCCCCccE-EEEEEEEEeeeeccCCccccccCcEEEEEeCCCCCCCEEEEEEecCCCCCccceeEEEcCCCC
Q 048036 85 ASVVRYATRRSQLNRK-ATGHSLVYNQLYPFLGLQNYTSGIIHHVRLTGLKPDTLYYYQCGDPSIPAMSGTYYFRTMPDS 163 (472)
Q Consensus 85 ~~~V~yg~~~~~~~~~-~~g~~~~y~~~~~~~g~~~~~~~~~h~v~l~gL~p~t~Y~Yrv~~~~~~~~S~~~~F~T~p~~ 163 (472)
.++|+||+..+..... +.|.+..+...+.. .+++++++|+|+|++|+|+|+||||||++. .||++|+|+|+| +
T Consensus 70 ~~~V~Yg~~~~~~~~~~~~~~~~~~~~~y~~---~~~~sg~ih~~~~~~L~~~t~YyY~~Gs~~--~wS~~f~F~t~p-~ 143 (452)
T KOG1378|consen 70 ENVVRYGEVKDKLDNSAARGMTEAWTDGYAN---GWRDSGYIHDAVMKNLEPNTRYYYQVGSDL--KWSEIFSFKTPP-G 143 (452)
T ss_pred CceEEEeecCCCccccccccceEEEeccccc---ccceeeeEeeeeecCCCCCceEEEEeCCCC--CcccceEeECCC-C
Confidence 3799999876553322 24444444433221 135689999999999999999999999986 699999999998 2
Q ss_pred CCCCCCeEEEEEeecCCCCChHHHHHHHHhC-CCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHHHH
Q 048036 164 SPTSYPSKIAIVGDQGLTYNTTSTVNHMISN-RPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDYWG 242 (472)
Q Consensus 164 ~~~~~~~~f~v~gD~~~~~~~~~~l~~l~~~-~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~~~ 242 (472)
+ ..+.+|+++||+|.......++....+. ++|+|||+|||+|++++.+ .+||+|+
T Consensus 144 -~-~~~~~~~i~GDlG~~~~~~s~~~~~~~~~k~d~vlhiGDlsYa~~~~n----------------------~~wD~f~ 199 (452)
T KOG1378|consen 144 -Q-DSPTRAAIFGDMGCTEPYTSTLRNQEENLKPDAVLHIGDLSYAMGYSN----------------------WQWDEFG 199 (452)
T ss_pred -c-cCceeEEEEccccccccccchHhHHhcccCCcEEEEecchhhcCCCCc----------------------cchHHHH
Confidence 2 2489999999999987666677666665 5999999999999875421 4899999
Q ss_pred HhhhhhhcCCCeEEecccccccce------e----------------------------ec------c----CChHHHHH
Q 048036 243 RYMQPVLSKVPIMVVEGNHELDFD------I----------------------------YI------Y----ITGDQYKW 278 (472)
Q Consensus 243 ~~i~~l~~~~P~~~v~GNHD~~F~------~----------------------------yi------d----~~~~Q~~W 278 (472)
++++++++.+|+|++.||||.+|. . |+ + ...+|++|
T Consensus 200 r~vEp~As~vPymv~~GNHE~d~~~~~~F~~y~~Rf~mP~~~s~s~~~l~YSfd~G~vhfv~lsse~~~~~~~~~~QY~W 279 (452)
T KOG1378|consen 200 RQVEPIASYVPYMVCSGNHEIDWPPQPCFVPYSARFNMPGNSSESDSNLYYSFDVGGVHFVVLSTETYYNFLKGTAQYQW 279 (452)
T ss_pred hhhhhhhccCceEEecccccccCCCcccccccceeeccCCCcCCCCCceeEEEeeccEEEEEEeccccccccccchHHHH
Confidence 999999999999999999999822 0 11 1 67899999
Q ss_pred HHHHHhcccCCCCCEEEEEecCCcccCCCC-CCCchH--HHHHHhhhc-----CceEEEeccccceeeeeecccCcc---
Q 048036 279 LEEDLVNVDREVTPWLVVTWHAPWYNTYKA-HYREAE--CMRVVAMED-----GVDVVFNGHVHAYERSNRVYNYTL--- 347 (472)
Q Consensus 279 L~~~L~~~~r~~~pw~Iv~~H~P~y~~~~~-~~~~~~--~~r~~~le~-----~VdlvlsGH~H~Y~R~~p~~~~~~--- 347 (472)
|+++|++++|+++||+||+.|+|+|++... ++++.+ .+|. .||+ +||+||+||+|.|||++|++|.++
T Consensus 280 L~~dL~~v~r~~tPWlIv~~HrP~Y~S~~~~~~reG~~~~~~~-~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~~~~ 358 (452)
T KOG1378|consen 280 LERDLASVDRKKTPWLIVQGHRPMYCSSNDAHYREGEFESMRE-GLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTCGTG 358 (452)
T ss_pred HHHHHHHhcccCCCeEEEEecccceecCCchhhccCcchhhHH-HHHHHHHHhceeEEEeccceehhccchhhcceeecc
Confidence 999999999877999999999999998764 665554 5554 4554 999999999999999999999876
Q ss_pred -------CCCCCEEEEeCCCCCCCCCcccccccCCCCCCCCCCcCeeecCCcccccccccCCCCCCCCCCCCCCccceee
Q 048036 348 -------DPCGPIHITVGDGGNREKMAVPYADELGNCPEPSTTLDKILGGGKFCGFNFTLGPATGKFCWDRQPDYSAFRE 420 (472)
Q Consensus 348 -------~~~g~vyiv~G~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 420 (472)
++++|+||++|+||+.++++.. + .++|+||+||+
T Consensus 359 ~~~~~~~d~~aPvyI~~G~~G~~e~~~~~----------------------------~-----------~~~p~~Sa~R~ 399 (452)
T KOG1378|consen 359 WGPVHLVDGMAPIYITVGDGGNHEHLDPF----------------------------S-----------SPQPEWSAFRE 399 (452)
T ss_pred CCcccccCCCCCEEEEEccCCcccccCcc----------------------------c-----------CCCCccccccc
Confidence 8899999999999998875310 0 25899999999
Q ss_pred CCccEEEEEEecCCcEEEEEEEecCCcceeeEEEEEEeCCCCCCCCC
Q 048036 421 STFGHGILEVKNETHALWTWHRNQDFYGAVGDQIYIVRQPDWCPVEP 467 (472)
Q Consensus 421 ~~~G~~~l~v~n~t~l~~~~~~~~~~~~~v~D~f~i~k~~~~~~~~~ 467 (472)
.+|||++|++.|.||+.|+|++++|.++++.|+|||.|+...|....
T Consensus 400 ~dfG~~~L~v~N~TH~~~~~~~~~d~~g~~~D~fwl~k~~~~~~~~~ 446 (452)
T KOG1378|consen 400 GDFGYTRLTAKNGTHAHVHWVRNSDASGVVIDSFWLIKDYRDMVVGV 446 (452)
T ss_pred ccCCeEEEEEecCceEEEEEEeccCCCceEeeeEEEEcccCcccccc
Confidence 99999999999999999999999888899999999999988765543
No 2
>PLN02533 probable purple acid phosphatase
Probab=100.00 E-value=3.9e-67 Score=547.90 Aligned_cols=331 Identities=44% Similarity=0.809 Sum_probs=278.3
Q ss_pred CCCCCceEEEEecCCCCeeEEEEEcCCCcccCCCCCCCCCCCCcEEEEeccCCCCccEEEEEEEEEeeeeccCCcccccc
Q 048036 43 EGFEPEQISVSLSSTHDSVWISWITGEFQIGNNIKPLDPKIIASVVRYATRRSQLNRKATGHSLVYNQLYPFLGLQNYTS 122 (472)
Q Consensus 43 ~~~~P~qv~Lt~~~d~~s~~V~W~T~~~~~g~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~ 122 (472)
+...|+||||++++ +++|+|+|.|.+. ..+.|+||++++.++.++.|++.+|... ..|.+
T Consensus 40 ~~~~P~qvhls~~~-~~~m~V~W~T~~~-------------~~~~V~yG~~~~~l~~~a~g~~~~~~~~------~~~~~ 99 (427)
T PLN02533 40 DPTHPDQVHISLVG-PDKMRISWITQDS-------------IPPSVVYGTVSGKYEGSANGTSSSYHYL------LIYRS 99 (427)
T ss_pred CCCCCceEEEEEcC-CCeEEEEEECCCC-------------CCCEEEEecCCCCCcceEEEEEEEEecc------ccccC
Confidence 56789999999997 8999999999875 3579999999999999999998887631 12457
Q ss_pred CcEEEEEeCCCCCCCEEEEEEecCCCCCccceeEEEcCCCCCCCCCCeEEEEEeecCCCCChHHHHHHHHhCCCCEEEEc
Q 048036 123 GIIHHVRLTGLKPDTLYYYQCGDPSIPAMSGTYYFRTMPDSSPTSYPSKIAIVGDQGLTYNTTSTVNHMISNRPDLILLV 202 (472)
Q Consensus 123 ~~~h~v~l~gL~p~t~Y~Yrv~~~~~~~~S~~~~F~T~p~~~~~~~~~~f~v~gD~~~~~~~~~~l~~l~~~~~Dfvl~~ 202 (472)
+++|+|+|+||+|+|+|+|||+.. .+|++|+|+|+|.. .++||+++||+|.......+++++.+.+||||||+
T Consensus 100 g~iH~v~l~~L~p~T~Y~Yrvg~~---~~s~~~~F~T~p~~----~~~~f~v~GDlG~~~~~~~tl~~i~~~~pD~vl~~ 172 (427)
T PLN02533 100 GQINDVVIGPLKPNTVYYYKCGGP---SSTQEFSFRTPPSK----FPIKFAVSGDLGTSEWTKSTLEHVSKWDYDVFILP 172 (427)
T ss_pred CeEEEEEeCCCCCCCEEEEEECCC---CCccceEEECCCCC----CCeEEEEEEeCCCCcccHHHHHHHHhcCCCEEEEc
Confidence 899999999999999999999965 46899999998853 37999999999876555678888988899999999
Q ss_pred CCcccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHhhhhhhcCCCeEEeccccccc------------c-----
Q 048036 203 GDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDYWGRYMQPVLSKVPIMVVEGNHELD------------F----- 265 (472)
Q Consensus 203 GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~~~~~i~~l~~~~P~~~v~GNHD~~------------F----- 265 (472)
||++|++. |+.+|+.|++.++++.+.+|+|+++||||.. |
T Consensus 173 GDl~y~~~-----------------------~~~~wd~f~~~i~~l~s~~P~m~~~GNHE~~~~~~~~~~~f~~y~~rf~ 229 (427)
T PLN02533 173 GDLSYANF-----------------------YQPLWDTFGRLVQPLASQRPWMVTHGNHELEKIPILHPEKFTAYNARWR 229 (427)
T ss_pred Cccccccc-----------------------hHHHHHHHHHHhhhHhhcCceEEeCccccccccccccCcCccchhhccc
Confidence 99999632 3578999999999999999999999999973 1
Q ss_pred ----------------ee----ec--c------CChHHHHHHHHHHhcccCCCCCEEEEEecCCcccCCCCCCCc--hHH
Q 048036 266 ----------------DI----YI--Y------ITGDQYKWLEEDLVNVDREVTPWLVVTWHAPWYNTYKAHYRE--AEC 315 (472)
Q Consensus 266 ----------------~~----yi--d------~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~y~~~~~~~~~--~~~ 315 (472)
+. |+ + ...+|++||+++|++++|+++||+||++|+|+|++...+..+ ...
T Consensus 230 mP~~~~g~~~~~yYSfd~g~vhfI~Lds~~~~~~~~~Q~~WLe~dL~~~~r~~~pwiIv~~H~P~y~s~~~~~~~~~~~~ 309 (427)
T PLN02533 230 MPFEESGSTSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKESVG 309 (427)
T ss_pred CCccccCCCCCceEEEEECCEEEEEEeCCccccCchHHHHHHHHHHHhhcccCCCEEEEEeCCCeeecccccCCcchhHH
Confidence 10 22 1 568999999999999988888999999999999876443222 122
Q ss_pred HHH---Hhhhc-CceEEEeccccceeeeeecccCccCCCCCEEEEeCCCCCCCCCcccccccCCCCCCCCCCcCeeecCC
Q 048036 316 MRV---VAMED-GVDVVFNGHVHAYERSNRVYNYTLDPCGPIHITVGDGGNREKMAVPYADELGNCPEPSTTLDKILGGG 391 (472)
Q Consensus 316 ~r~---~~le~-~VdlvlsGH~H~Y~R~~p~~~~~~~~~g~vyiv~G~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (472)
+|. .+|++ +|||+|+||+|.|||++|+++++++++|++||++|+||+.+++...
T Consensus 310 ~r~~le~Ll~~~~VdlvlsGH~H~YeR~~p~~~~~~~~~gpvyiv~G~gG~~e~~~~~---------------------- 367 (427)
T PLN02533 310 MKESMETLLYKARVDLVFAGHVHAYERFDRVYQGKTDKCGPVYITIGDGGNREGLATK---------------------- 367 (427)
T ss_pred HHHHHHHHHHHhCCcEEEecceecccccccccCCccCCCCCEEEEeCCCccccccccc----------------------
Confidence 333 15556 9999999999999999999999999999999999999998764211
Q ss_pred cccccccccCCCCCCCCCCCCCCccceeeCCccEEEEEEecCCcEEEEEEEecCCcceeeEEEEEEeCCC
Q 048036 392 KFCGFNFTLGPATGKFCWDRQPDYSAFRESTFGHGILEVKNETHALWTWHRNQDFYGAVGDQIYIVRQPD 461 (472)
Q Consensus 392 g~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~G~~~l~v~n~t~l~~~~~~~~~~~~~v~D~f~i~k~~~ 461 (472)
| + .++++||+||+.+|||++|+|.|.|||+|+|++++++++.|.|+|||+|...
T Consensus 368 ------~---------~-~~~~~~s~~r~~~~G~~~l~v~n~t~l~~~~~~~~~~~~~~~D~~~i~~~~~ 421 (427)
T PLN02533 368 ------Y---------I-DPKPDISLFREASFGHGQLNVVDANTMEWTWHRNDDDQSVASDSVWLKSLLT 421 (427)
T ss_pred ------c---------C-CCCCCceeEEeccCCEEEEEEEcCCeEEEEEEecCCCCceeeeEEEEEeccC
Confidence 1 0 3568899999999999999999999999999999887778999999999854
No 3
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=100.00 E-value=2.8e-39 Score=322.87 Aligned_cols=229 Identities=45% Similarity=0.757 Sum_probs=181.2
Q ss_pred CCeEEEEEeecCCC-CChHHHHHHHHh--CCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHh
Q 048036 168 YPSKIAIVGDQGLT-YNTTSTVNHMIS--NRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDYWGRY 244 (472)
Q Consensus 168 ~~~~f~v~gD~~~~-~~~~~~l~~l~~--~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~~~~~ 244 (472)
.++||+++||+|.. ....+++++|++ .+|||||++||++|+.+.. .+.+|+.|++.
T Consensus 3 ~~~~f~v~gD~~~~~~~~~~~~~~l~~~~~~~d~vl~~GDl~~~~~~~---------------------~~~~~~~~~~~ 61 (294)
T cd00839 3 TPFKFAVFGDMGQNTNNSTNTLDHLEKELGNYDAILHVGDLAYADGYN---------------------NGSRWDTFMRQ 61 (294)
T ss_pred CcEEEEEEEECCCCCCCcHHHHHHHHhccCCccEEEEcCchhhhcCCc---------------------cchhHHHHHHH
Confidence 37999999999973 455778888887 6899999999999854321 12579999999
Q ss_pred hhhhhcCCCeEEeccccccc-------ce------------------------e----ec--c---------CChHHHHH
Q 048036 245 MQPVLSKVPIMVVEGNHELD-------FD------------------------I----YI--Y---------ITGDQYKW 278 (472)
Q Consensus 245 i~~l~~~~P~~~v~GNHD~~-------F~------------------------~----yi--d---------~~~~Q~~W 278 (472)
++++...+|+++++||||.. +. . |+ + ...+|++|
T Consensus 62 ~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~~~~q~~W 141 (294)
T cd00839 62 IEPLASYVPYMVTPGNHEADYNFSFYKIKAFFPRFRFPHSPSGSTSNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDW 141 (294)
T ss_pred HHHHHhcCCcEEcCcccccccCCCCcccccccccccccCCCCCCCCCceEEEeeCCEEEEEEecccccccCCCCcHHHHH
Confidence 99998899999999999986 00 0 11 1 36899999
Q ss_pred HHHHHhcccCCCCCEEEEEecCCcccCCCCCCC--chHHHHH---Hhhhc-CceEEEeccccceeeeeecccCc------
Q 048036 279 LEEDLVNVDREVTPWLVVTWHAPWYNTYKAHYR--EAECMRV---VAMED-GVDVVFNGHVHAYERSNRVYNYT------ 346 (472)
Q Consensus 279 L~~~L~~~~r~~~pw~Iv~~H~P~y~~~~~~~~--~~~~~r~---~~le~-~VdlvlsGH~H~Y~R~~p~~~~~------ 346 (472)
|+++|+++++++.||+||++|+|+|+....... .....+. .+|++ +|+++|+||+|.|+|++|+++++
T Consensus 142 L~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~~~~~~~ 221 (294)
T cd00839 142 LEADLAKVDRSKTPWIIVMGHRPMYCSNTDHDDCIEGEKMRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVVGDCN 221 (294)
T ss_pred HHHHHHHhcccCCCeEEEEeccCcEecCccccccchhHHHHHHHHHHHHHhCCCEEEEccceeeEeechhhCCEeccccc
Confidence 999999987666799999999999986543221 0112222 15566 99999999999999999998865
Q ss_pred --cCCCCCEEEEeCCCCCCCCCcccccccCCCCCCCCCCcCeeecCCcccccccccCCCCCCCCCCCCCCccceeeCCcc
Q 048036 347 --LDPCGPIHITVGDGGNREKMAVPYADELGNCPEPSTTLDKILGGGKFCGFNFTLGPATGKFCWDRQPDYSAFRESTFG 424 (472)
Q Consensus 347 --~~~~g~vyiv~G~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~G 424 (472)
.+++|++||++|+||+....... . ...++|++++...||
T Consensus 222 ~~~~~~g~~yiv~G~~G~~~~~~~~------------------------------~---------~~~~~~~~~~~~~~g 262 (294)
T cd00839 222 PYSNPKGPVHIVIGAGGNDEGLDPF------------------------------S---------APPPAWSAFRESDYG 262 (294)
T ss_pred cccCCCccEEEEECCCccccCcCcc------------------------------c---------CCCCCceEEEeccCC
Confidence 36789999999999997643100 0 112579999999999
Q ss_pred EEEEEEecCCcEEEEEEEecCCcceeeEEEEEEe
Q 048036 425 HGILEVKNETHALWTWHRNQDFYGAVGDQIYIVR 458 (472)
Q Consensus 425 ~~~l~v~n~t~l~~~~~~~~~~~~~v~D~f~i~k 458 (472)
|++|++.++|+|+|+|+++.++ +|+|+|+|+|
T Consensus 263 ~~~~~~~~~t~l~~~~~~~~~g--~v~D~f~i~k 294 (294)
T cd00839 263 FGRLTVHNSTHLHFEWIRNDDG--VVIDSFWIIK 294 (294)
T ss_pred EEEEEEEecCeEEEEEEECCCC--eEEEEEEEeC
Confidence 9999999999999999998776 9999999987
No 4
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=99.96 E-value=1.6e-27 Score=243.21 Aligned_cols=216 Identities=17% Similarity=0.235 Sum_probs=157.5
Q ss_pred CeEEEEEeecCCCCChHHHHHH-H---H-hCCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHHHHH
Q 048036 169 PSKIAIVGDQGLTYNTTSTVNH-M---I-SNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDYWGR 243 (472)
Q Consensus 169 ~~~f~v~gD~~~~~~~~~~l~~-l---~-~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~~~~ 243 (472)
.++|+++||+|.+...+..+++ | . +.++||||.+||+. .+|..+ ..+++|..-++
T Consensus 26 ~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF-~~Gv~s-------------------v~Dp~f~~~FE 85 (394)
T PTZ00422 26 QLRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNF-PGGVDG-------------------LNDPKWKHCFE 85 (394)
T ss_pred eEEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccc-cCCCCC-------------------ccchhHHhhHh
Confidence 6899999999977655544433 2 2 35899999999998 455421 11356776444
Q ss_pred -hhhhhh--cCCCeEEeccccccc-------------------------------------------ce-----------
Q 048036 244 -YMQPVL--SKVPIMVVEGNHELD-------------------------------------------FD----------- 266 (472)
Q Consensus 244 -~i~~l~--~~~P~~~v~GNHD~~-------------------------------------------F~----------- 266 (472)
...+.. ..+||++++||||+. |.
T Consensus 86 ~vY~~~s~~L~~Pwy~vLGNHDy~Gn~~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~~yY~~~~~f~~~~~~~~ 165 (394)
T PTZ00422 86 NVYSEESGDMQIPFFTVLGQADWDGNYNAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPNYWYHYFTHFTDTSGPSL 165 (394)
T ss_pred hhccCcchhhCCCeEEeCCcccccCCchhhhccccccccccccccccccccccccCCCccCCchhheeeeeeeccccccc
Confidence 333434 679999999999973 00
Q ss_pred ---------e---ecc------------CChHHHHHHHHHHhcccCCCCCEEEEEecCCcccCCCCCCCchHHHHH---H
Q 048036 267 ---------I---YIY------------ITGDQYKWLEEDLVNVDREVTPWLVVTWHAPWYNTYKAHYREAECMRV---V 319 (472)
Q Consensus 267 ---------~---yid------------~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~y~~~~~~~~~~~~~r~---~ 319 (472)
. |+| ....|++||+++|+.+ ++.++|+||++|||+|++.. |... .+++. +
T Consensus 166 ~~~~~~~~~v~fifiDT~~l~~~~~~~~~~~~~w~~L~~~L~~a-~k~a~WkIVvGHhPIySsG~-hg~~-~~L~~~L~P 242 (394)
T PTZ00422 166 LKSGHKDMSVAFIFIDTWILSSSFPYKKVSERAWQDLKATLEYA-PKIADYIIVVGDKPIYSSGS-SKGD-SYLSYYLLP 242 (394)
T ss_pred ccccCCCCEEEEEEEECchhcccCCccccCHHHHHHHHHHHHhh-ccCCCeEEEEecCceeecCC-CCCC-HHHHHHHHH
Confidence 0 223 2468899999999754 34678999999999999864 3222 23433 3
Q ss_pred hhhc-CceEEEeccccceeeeeecccCccCCCCCEEEEeCCCCCCCCCcccccccCCCCCCCCCCcCeeecCCccccccc
Q 048036 320 AMED-GVDVVFNGHVHAYERSNRVYNYTLDPCGPIHITVGDGGNREKMAVPYADELGNCPEPSTTLDKILGGGKFCGFNF 398 (472)
Q Consensus 320 ~le~-~VdlvlsGH~H~Y~R~~p~~~~~~~~~g~vyiv~G~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 398 (472)
+|++ +||++|+||+|.|||.. .+|+.||++|+||...+..
T Consensus 243 LL~ky~VdlYisGHDH~lq~i~--------~~gt~yIvSGaGs~~~~~~------------------------------- 283 (394)
T PTZ00422 243 LLKDAQVDLYISGYDRNMEVLT--------DEGTAHINCGSGGNSGRKS------------------------------- 283 (394)
T ss_pred HHHHcCcCEEEEccccceEEec--------CCCceEEEeCccccccCCC-------------------------------
Confidence 6677 99999999999999974 3589999999998854321
Q ss_pred ccCCCCCCCCCCCCCCccceeeCCccEEEEEEecCCcEEEEEEEecCCcceeeEEEEEEeCC
Q 048036 399 TLGPATGKFCWDRQPDYSAFRESTFGHGILEVKNETHALWTWHRNQDFYGAVGDQIYIVRQP 460 (472)
Q Consensus 399 ~~~~~~~~~~~~~~~~~s~~~~~~~G~~~l~v~n~t~l~~~~~~~~~~~~~v~D~f~i~k~~ 460 (472)
....+|+.|....+||+.+++ +.+.|+++|+++.+| .+++++++.+..
T Consensus 284 -----------~~~~~~s~F~~~~~GF~~~~l-~~~~l~~~fid~~~G--kvL~~~~~~~~~ 331 (394)
T PTZ00422 284 -----------IMKNSKSLFYSEDIGFCIHEL-NAEGMVTKFVSGNTG--EVLYTHKQPLKK 331 (394)
T ss_pred -----------CCCCCCcceecCCCCEEEEEE-ecCEEEEEEEeCCCC--cEEEEeeecccc
Confidence 012457788888999999998 888999999975455 999999986553
No 5
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=99.93 E-value=1e-24 Score=216.19 Aligned_cols=206 Identities=21% Similarity=0.338 Sum_probs=141.3
Q ss_pred eEEEEEeecCCC-CChH-HH---HHHHH-hCCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHH-HHHH
Q 048036 170 SKIAIVGDQGLT-YNTT-ST---VNHMI-SNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRW-DYWG 242 (472)
Q Consensus 170 ~~f~v~gD~~~~-~~~~-~~---l~~l~-~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~w-d~~~ 242 (472)
++|+++||+|.. ...+ ++ +.++. +.+|||||++||++|+++... .+...| +.|.
T Consensus 1 ~~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~-------------------~~~~~~~~~~~ 61 (277)
T cd07378 1 LRFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGS-------------------VDDPRFETTFE 61 (277)
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCC-------------------CcchHHHHHHH
Confidence 489999999986 2222 22 33333 369999999999999765321 111233 3455
Q ss_pred HhhhhhhcCCCeEEeccccccc--c--------------------------e-------e-ec--c--------------
Q 048036 243 RYMQPVLSKVPIMVVEGNHELD--F--------------------------D-------I-YI--Y-------------- 270 (472)
Q Consensus 243 ~~i~~l~~~~P~~~v~GNHD~~--F--------------------------~-------~-yi--d-------------- 270 (472)
+.++.+..++|+++++||||.. + . . |+ |
T Consensus 62 ~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~i~LDt~~~~~~~~~~~~~ 141 (277)
T cd07378 62 DVYSAPSLQVPWYLVLGNHDYSGNVSAQIDYTKRPNSPRWTMPAYYYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIASP 141 (277)
T ss_pred HHccchhhcCCeEEecCCcccCCCchheeehhccCCCCCccCcchheEEEeecCCCCCEEEEEEEeChhHcCcccccccc
Confidence 5555555689999999999975 0 0 1 11 1
Q ss_pred -------CChHHHHHHHHHHhcccCCCCCEEEEEecCCcccCCCCCCC--chHHHHHHhhhc-CceEEEeccccceeeee
Q 048036 271 -------ITGDQYKWLEEDLVNVDREVTPWLVVTWHAPWYNTYKAHYR--EAECMRVVAMED-GVDVVFNGHVHAYERSN 340 (472)
Q Consensus 271 -------~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~y~~~~~~~~--~~~~~r~~~le~-~VdlvlsGH~H~Y~R~~ 340 (472)
...+|++||+++|+++. .+|+||++|||+++....... ..+.+.. ++++ +|+++|+||.|.+++..
T Consensus 142 ~~~~~~~~~~~Q~~wL~~~L~~~~---~~~~iv~~H~P~~~~~~~~~~~~~~~~l~~-l~~~~~v~~vl~GH~H~~~~~~ 217 (277)
T cd07378 142 YGPPNGKLAEEQLAWLEKTLAAST---ADWKIVVGHHPIYSSGEHGPTSCLVDRLLP-LLKKYKVDAYLSGHDHNLQHIK 217 (277)
T ss_pred ccCcchhhHHHHHHHHHHHHHhcC---CCeEEEEeCccceeCCCCCCcHHHHHHHHH-HHHHcCCCEEEeCCcccceeee
Confidence 25789999999999863 379999999999976432111 1112233 5555 89999999999999886
Q ss_pred ecccCccCCCCCEEEEeCCCCCCCCCcccccccCCCCCCCCCCcCeeecCCcccccccccCCCCCCCCCCCCCCccceee
Q 048036 341 RVYNYTLDPCGPIHITVGDGGNREKMAVPYADELGNCPEPSTTLDKILGGGKFCGFNFTLGPATGKFCWDRQPDYSAFRE 420 (472)
Q Consensus 341 p~~~~~~~~~g~vyiv~G~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 420 (472)
+ +..|+.||++|+||........ . ....+.|++++.
T Consensus 218 ~------~~~~~~~i~~G~~~~~~~~~~~------------------------------~--------~~~~~~~~~~~~ 253 (277)
T cd07378 218 D------DGSGTSFVVSGAGSKARPSVKH------------------------------I--------DKVPQFFSGFTS 253 (277)
T ss_pred c------CCCCcEEEEeCCCcccCCCCCc------------------------------c--------Cccccccccccc
Confidence 4 2368999999999886432100 0 011246788888
Q ss_pred CCccEEEEEEecCCcEEEEEEEe
Q 048036 421 STFGHGILEVKNETHALWTWHRN 443 (472)
Q Consensus 421 ~~~G~~~l~v~n~t~l~~~~~~~ 443 (472)
..+||.+++| +.++|.++|+..
T Consensus 254 ~~~Gy~~i~v-~~~~l~~~~~~~ 275 (277)
T cd07378 254 SGGGFAYLEL-TKEELTVRFYDA 275 (277)
T ss_pred CCCCEEEEEE-ecCEEEEEEECC
Confidence 9999999999 566899999964
No 6
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=99.89 E-value=9.5e-22 Score=187.10 Aligned_cols=220 Identities=21% Similarity=0.295 Sum_probs=145.8
Q ss_pred CCeEEEEEeecCCCCCh--HHHH---HHHHh-CCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHH-
Q 048036 168 YPSKIAIVGDQGLTYNT--TSTV---NHMIS-NRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDY- 240 (472)
Q Consensus 168 ~~~~f~v~gD~~~~~~~--~~~l---~~l~~-~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~- 240 (472)
.+++|+++||||..... ..+. .+|.+ .+.||||.+||++|.+|..+. ++.+.+.
T Consensus 42 gslsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~-------------------~Dp~Fq~s 102 (336)
T KOG2679|consen 42 GSLSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSE-------------------NDPRFQDS 102 (336)
T ss_pred CceEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCC-------------------CChhHHhh
Confidence 47999999999965432 2222 22333 589999999999998776431 1122222
Q ss_pred HHHhhhhhhcCCCeEEeccccccc-----------------------c----------ee----ec------------c-
Q 048036 241 WGRYMQPVLSKVPIMVVEGNHELD-----------------------F----------DI----YI------------Y- 270 (472)
Q Consensus 241 ~~~~i~~l~~~~P~~~v~GNHD~~-----------------------F----------~~----yi------------d- 270 (472)
|-+....-..+.||+.+.||||+. | .. |. +
T Consensus 103 F~nIYT~pSLQkpWy~vlGNHDyrGnV~AQls~~l~~~d~RW~c~rsf~~~ae~ve~f~v~~~~f~~d~~~~~~~~~ydw 182 (336)
T KOG2679|consen 103 FENIYTAPSLQKPWYSVLGNHDYRGNVEAQLSPVLRKIDKRWICPRSFYVDAEIVEMFFVDTTPFMDDTFTLCTDDVYDW 182 (336)
T ss_pred hhhcccCcccccchhhhccCccccCchhhhhhHHHHhhccceecccHHhhcceeeeeeccccccchhhheeccccccccc
Confidence 323333334567999999999997 0 00 11 0
Q ss_pred --------CChHHHHHHHHHHhcccCCCCCEEEEEecCCcccCCCCCCCchHHHHH---Hhhhc-CceEEEeccccceee
Q 048036 271 --------ITGDQYKWLEEDLVNVDREVTPWLVVTWHAPWYNTYKAHYREAECMRV---VAMED-GVDVVFNGHVHAYER 338 (472)
Q Consensus 271 --------~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~y~~~~~~~~~~~~~r~---~~le~-~VdlvlsGH~H~Y~R 338 (472)
....++.||+..|++ +.++|+||.+|||+.+... | +...++++ ++|+. +||++++||+|+.|.
T Consensus 183 ~~v~PR~~~~~~~l~~le~~L~~---S~a~wkiVvGHh~i~S~~~-H-G~T~eL~~~LlPiL~~n~VdlY~nGHDHcLQh 257 (336)
T KOG2679|consen 183 RGVLPRVKYLRALLSWLEVALKA---SRAKWKIVVGHHPIKSAGH-H-GPTKELEKQLLPILEANGVDLYINGHDHCLQH 257 (336)
T ss_pred ccCChHHHHHHHHHHHHHHHHHH---hhcceEEEecccceehhhc-c-CChHHHHHHHHHHHHhcCCcEEEecchhhhhh
Confidence 446788999999998 5788999999999998643 3 44455554 36777 999999999999888
Q ss_pred eeecccCccCCCCCEEEEeCCCCCCCCCcccccccCCCCCCCCCCcCeeecCCcccccccccCCCCCCCCCCCCCCccce
Q 048036 339 SNRVYNYTLDPCGPIHITVGDGGNREKMAVPYADELGNCPEPSTTLDKILGGGKFCGFNFTLGPATGKFCWDRQPDYSAF 418 (472)
Q Consensus 339 ~~p~~~~~~~~~g~vyiv~G~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~s~~ 418 (472)
..- ...++-|+++|+|......- .+ .| ...|+.-.|
T Consensus 258 is~------~e~~iqf~tSGagSkaw~g~-~~--------~~-----------------------------~~~p~~lkF 293 (336)
T KOG2679|consen 258 ISS------PESGIQFVTSGAGSKAWRGT-DH--------NP-----------------------------EVNPKELKF 293 (336)
T ss_pred ccC------CCCCeeEEeeCCcccccCCC-cc--------CC-----------------------------ccChhheEE
Confidence 741 13577888888886532210 00 00 012333345
Q ss_pred eeCCccEEEEEEecCCcEEEEEEEecCCcceeeEEEEEEeC
Q 048036 419 RESTFGHGILEVKNETHALWTWHRNQDFYGAVGDQIYIVRQ 459 (472)
Q Consensus 419 ~~~~~G~~~l~v~n~t~l~~~~~~~~~~~~~v~D~f~i~k~ 459 (472)
.-..-||.-+++ +...+++.|++. . |.++.+-...|+
T Consensus 294 ~YdgqGfmsv~i-s~~e~~vvfyD~-~--G~~Lhk~~t~kr 330 (336)
T KOG2679|consen 294 YYDGQGFMSVEI-SHSEARVVFYDV-S--GKVLHKWSTSKR 330 (336)
T ss_pred eeCCCceEEEEE-ecceeEEEEEec-c--CceEEEeecccc
Confidence 545559999999 777899999975 2 477777554444
No 7
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=99.86 E-value=1.2e-20 Score=185.78 Aligned_cols=167 Identities=20% Similarity=0.321 Sum_probs=113.8
Q ss_pred CCeEEEEEeecCCCCC--h---------------HHHHHHHHhC--CCCEEEEcCCcccccccccCCCCCCccccCCCCC
Q 048036 168 YPSKIAIVGDQGLTYN--T---------------TSTVNHMISN--RPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANS 228 (472)
Q Consensus 168 ~~~~f~v~gD~~~~~~--~---------------~~~l~~l~~~--~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~ 228 (472)
.+++|++++|+|.+.. . ...++.+.+. +|||||++||+++.. ..
T Consensus 3 ~~~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~------~~----------- 65 (262)
T cd07395 3 GPFYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAM------PG----------- 65 (262)
T ss_pred CCEEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCC------cc-----------
Confidence 3799999999998731 1 1234445555 899999999999631 11
Q ss_pred CCcccchHHHHHHHHhhhhhhcCCCeEEeccccccc----------c-----------ee----ec--c-----------
Q 048036 229 PIHETYQPRWDYWGRYMQPVLSKVPIMVVEGNHELD----------F-----------DI----YI--Y----------- 270 (472)
Q Consensus 229 ~~~e~y~~~wd~~~~~i~~l~~~~P~~~v~GNHD~~----------F-----------~~----yi--d----------- 270 (472)
.+..+.+|+.+.+.++.+...+|+++++||||.. | .. |+ +
T Consensus 66 --~~~~~~~~~~~~~~~~~~~~~vp~~~i~GNHD~~~~~~~~~~~~f~~~~g~~~y~~~~~~~~~i~lds~~~~~~~~~~ 143 (262)
T cd07395 66 --DELRERQVSDLKDVLSLLDPDIPLVCVCGNHDVGNTPTEESIKDYRDVFGDDYFSFWVGGVFFIVLNSQLFFDPSEVP 143 (262)
T ss_pred --hhhHHHHHHHHHHHHhhccCCCcEEEeCCCCCCCCCCChhHHHHHHHHhCCcceEEEECCEEEEEeccccccCccccc
Confidence 0011245777777777666679999999999973 1 00 11 1
Q ss_pred -CChHHHHHHHHHHhcccCCCCCEEEEEecCCcccCCCCCC----C----chHHHHHHhhhc-CceEEEeccccceeeee
Q 048036 271 -ITGDQYKWLEEDLVNVDREVTPWLVVTWHAPWYNTYKAHY----R----EAECMRVVAMED-GVDVVFNGHVHAYERSN 340 (472)
Q Consensus 271 -~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~y~~~~~~~----~----~~~~~r~~~le~-~VdlvlsGH~H~Y~R~~ 340 (472)
...+|++||+++|+++.+.+.+|+||++|+|++....... . ....+.. +|++ +|+++|+||+|.+.+..
T Consensus 144 ~~~~~ql~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~~~l~~-ll~~~~V~~v~~GH~H~~~~~~ 222 (262)
T cd07395 144 ELAQAQDVWLEEQLEIAKESDCKHVIVFQHIPWFLEDPDEEDSYFNIPKSVRKPLLD-KFKKAGVKAVFSGHYHRNAGGR 222 (262)
T ss_pred cchHHHHHHHHHHHHHHHhccCCcEEEEECcCCccCCCCCCcccCCcCHHHHHHHHH-HHHhcCceEEEECccccCCceE
Confidence 3578999999999987534557899999999986432110 1 1122333 5666 99999999999987642
Q ss_pred ecccCccCCCCCEEEEeCCCCC
Q 048036 341 RVYNYTLDPCGPIHITVGDGGN 362 (472)
Q Consensus 341 p~~~~~~~~~g~vyiv~G~gG~ 362 (472)
-.|+.|++++++|.
T Consensus 223 --------~~g~~~~~~~~~~~ 236 (262)
T cd07395 223 --------YGGLEMVVTSAIGA 236 (262)
T ss_pred --------ECCEEEEEcCceec
Confidence 24777887777765
No 8
>PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: A phosphate monoester + H(2)O = an alcohol + phosphate ; PDB: 2YEQ_B.
Probab=99.77 E-value=8.6e-17 Score=170.65 Aligned_cols=141 Identities=22% Similarity=0.332 Sum_probs=72.2
Q ss_pred cCcEEEEEeCCCCCCCEEEEEEecCCCCCccceeEEEcCCCCCCCCCCeEEEEEeecCCCCChHHHHHHHHh-CCCCEEE
Q 048036 122 SGIIHHVRLTGLKPDTLYYYQCGDPSIPAMSGTYYFRTMPDSSPTSYPSKIAIVGDQGLTYNTTSTVNHMIS-NRPDLIL 200 (472)
Q Consensus 122 ~~~~h~v~l~gL~p~t~Y~Yrv~~~~~~~~S~~~~F~T~p~~~~~~~~~~f~v~gD~~~~~~~~~~l~~l~~-~~~Dfvl 200 (472)
..+.+++.|+||+|+|+|+||+........|.+++|+|+|.... ..+||+++++.+.......+++++++ .+|||+|
T Consensus 60 ~d~t~~v~v~gL~p~t~Y~Y~~~~~~~~~~s~~g~~rT~p~~~~--~~~r~a~~SC~~~~~~~~~~~~~~a~~~~~D~~l 137 (453)
T PF09423_consen 60 RDFTVKVDVTGLQPGTRYYYRFVVDGGGQTSPVGRFRTAPDGDP--DPFRFAFGSCQNYEDGYFPAYRRIAERDDPDFVL 137 (453)
T ss_dssp GTTEEEEEE-S--TT-EEEEEEEE--TTEE---EEEE--TT-------EEEEEE----CCC---HHHHHHTT-S--SEEE
T ss_pred CCeEeecccCCCCCCceEEEEEEEecCCCCCCceEEEcCCCCCC--CceEEEEECCCCcccChHHHHHhhhccCCCcEEE
Confidence 45899999999999999999999853346789999999976543 36999999999865555778888888 6999999
Q ss_pred EcCCcccccccccCCCC-CCcc-cc--CCCCCCCcccchHHHHHHH--HhhhhhhcCCCeEEeccccccc
Q 048036 201 LVGDVTYSNLYLTNGTG-SNCY-SC--SFANSPIHETYQPRWDYWG--RYMQPVLSKVPIMVVEGNHELD 264 (472)
Q Consensus 201 ~~GDl~y~d~~~~~G~~-~~~~-~~--~~~~~~~~e~y~~~wd~~~--~~i~~l~~~~P~~~v~GNHD~~ 264 (472)
|+||++|+|....-+.. .... +. ........+.|+..|..+. ..++.+.+.+|+++++.+||+.
T Consensus 138 ~lGD~IY~d~~~~~~~~~~~~~~r~~~p~~~~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwDDHdi~ 207 (453)
T PF09423_consen 138 HLGDQIYEDGGGGYGNLSRRPIGRAPEPAHEAETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWDDHDIG 207 (453)
T ss_dssp E-S-SS----TTSS--TT---S-----SSSS--SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---STTTS
T ss_pred EeCCeeeccCCcccccccccccccccccccccccHHHHHHHHHHHcCCHHHHHHhhcccEEEEccCceec
Confidence 99999998752000000 0000 00 0001123345666666553 3556677899999999999985
No 9
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=99.77 E-value=9.4e-18 Score=162.51 Aligned_cols=155 Identities=25% Similarity=0.395 Sum_probs=107.8
Q ss_pred EEEEEeecCCCCCh-------------HHHHHHHHhC--CCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccch
Q 048036 171 KIAIVGDQGLTYNT-------------TSTVNHMISN--RPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQ 235 (472)
Q Consensus 171 ~f~v~gD~~~~~~~-------------~~~l~~l~~~--~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~ 235 (472)
||++++|+|.+... .++++.+.+. ++||||++||+++. +. .
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~------~~------------------~ 56 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDD------GS------------------P 56 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCC------CC------------------H
Confidence 68999999987431 2344555555 89999999999952 21 1
Q ss_pred HHHHHHHHhhhhhhcCCCeEEeccccccc------ce----------e--------ec--c----------CChHHHHHH
Q 048036 236 PRWDYWGRYMQPVLSKVPIMVVEGNHELD------FD----------I--------YI--Y----------ITGDQYKWL 279 (472)
Q Consensus 236 ~~wd~~~~~i~~l~~~~P~~~v~GNHD~~------F~----------~--------yi--d----------~~~~Q~~WL 279 (472)
..|+.+.+.++.+ .+|++.++||||.. |. + |+ + ...+|++||
T Consensus 57 ~~~~~~~~~l~~~--~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~ql~wL 134 (240)
T cd07402 57 ESYERLRELLAAL--PIPVYLLPGNHDDRAAMRAVFPELPPAPGFVQYVVDLGGWRLILLDSSVPGQHGGELCAAQLDWL 134 (240)
T ss_pred HHHHHHHHHHhhc--CCCEEEeCCCCCCHHHHHHhhccccccccccceeEecCCEEEEEEeCCCCCCcCCEECHHHHHHH
Confidence 3456666666655 78999999999974 11 0 11 1 467899999
Q ss_pred HHHHhcccCCCCCEEEEEecCCcccCCCCC-----CCchHHHHHHhhhc--CceEEEeccccceeeeeecccCccCCCCC
Q 048036 280 EEDLVNVDREVTPWLVVTWHAPWYNTYKAH-----YREAECMRVVAMED--GVDVVFNGHVHAYERSNRVYNYTLDPCGP 352 (472)
Q Consensus 280 ~~~L~~~~r~~~pw~Iv~~H~P~y~~~~~~-----~~~~~~~r~~~le~--~VdlvlsGH~H~Y~R~~p~~~~~~~~~g~ 352 (472)
++.|++.. ..++|+++|+|++...... ..+.+.+.. ++++ +|+++|+||+|...... -+|+
T Consensus 135 ~~~L~~~~---~~~~il~~H~pp~~~~~~~~~~~~~~~~~~~~~-~l~~~~~v~~v~~GH~H~~~~~~--------~~g~ 202 (240)
T cd07402 135 EAALAEAP---DKPTLVFLHHPPFPVGIAWMDAIGLRNAEALAA-VLARHPNVRAILCGHVHRPIDGS--------WGGI 202 (240)
T ss_pred HHHHHhCC---CCCEEEEECCCCccCCchhhhhhhCCCHHHHHH-HHhcCCCeeEEEECCcCchHHeE--------ECCE
Confidence 99999864 2358899999987643211 012233444 5555 89999999999965543 2688
Q ss_pred EEEEeCCCCCC
Q 048036 353 IHITVGDGGNR 363 (472)
Q Consensus 353 vyiv~G~gG~~ 363 (472)
.|+++|+.|..
T Consensus 203 ~~~~~gs~~~~ 213 (240)
T cd07402 203 PLLTAPSTCHQ 213 (240)
T ss_pred EEEEcCcceee
Confidence 88999998774
No 10
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=99.77 E-value=7.2e-18 Score=161.47 Aligned_cols=143 Identities=19% Similarity=0.287 Sum_probs=101.9
Q ss_pred eEEEEEeecCCCCCh-----HHH----HHHHHhCCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHH
Q 048036 170 SKIAIVGDQGLTYNT-----TST----VNHMISNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDY 240 (472)
Q Consensus 170 ~~f~v~gD~~~~~~~-----~~~----l~~l~~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~ 240 (472)
|||++++|+|..... .+. ++.+.+.++|+||++||++.. +.. ..+|+.
T Consensus 1 f~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~------~~~-----------------~~~~~~ 57 (214)
T cd07399 1 FTLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDD------GDN-----------------DAEWEA 57 (214)
T ss_pred CEEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCC------CCC-----------------HHHHHH
Confidence 689999999975431 122 333345689999999999952 110 247888
Q ss_pred HHHhhhhhh-cCCCeEEecccccccceeecc--CChHHHHHHHHHHhcccCCCCCEEEEEecCCcccCCCCCCC------
Q 048036 241 WGRYMQPVL-SKVPIMVVEGNHELDFDIYIY--ITGDQYKWLEEDLVNVDREVTPWLVVTWHAPWYNTYKAHYR------ 311 (472)
Q Consensus 241 ~~~~i~~l~-~~~P~~~v~GNHD~~F~~yid--~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~y~~~~~~~~------ 311 (472)
+.+.++.+. ..+|+++++||||.. .+.+ ...+|++||++.|++.. ..++|+++|+|+++.......
T Consensus 58 ~~~~~~~l~~~~~p~~~~~GNHD~~--~~ld~~~~~~ql~WL~~~L~~~~---~~~~iv~~H~p~~~~~~~~~~~~~~~~ 132 (214)
T cd07399 58 ADKAFARLDKAGIPYSVLAGNHDLV--LALEFGPRDEVLQWANEVLKKHP---DRPAILTTHAYLNCDDSRPDSIDYDSD 132 (214)
T ss_pred HHHHHHHHHHcCCcEEEECCCCcch--hhCCCCCCHHHHHHHHHHHHHCC---CCCEEEEecccccCCCCcCcccccccc
Confidence 888888775 679999999999952 1233 67899999999999853 235899999999865432110
Q ss_pred --ch-HHHHHHhhhc--CceEEEeccccceeeeee
Q 048036 312 --EA-ECMRVVAMED--GVDVVFNGHVHAYERSNR 341 (472)
Q Consensus 312 --~~-~~~r~~~le~--~VdlvlsGH~H~Y~R~~p 341 (472)
.. ..+.. ++++ +|+++|+||.|.+.+...
T Consensus 133 ~~~~~~~~~~-ll~~~~~V~~v~~GH~H~~~~~~~ 166 (214)
T cd07399 133 VNDGQQIWDK-LVKKNDNVFMVLSGHVHGAGRTTL 166 (214)
T ss_pred cccHHHHHHH-HHhCCCCEEEEEccccCCCceEEE
Confidence 11 22444 5665 899999999999887753
No 11
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.75 E-value=1.5e-17 Score=164.42 Aligned_cols=160 Identities=18% Similarity=0.250 Sum_probs=108.2
Q ss_pred eEEEEEeecCCCCC----------h----HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccch
Q 048036 170 SKIAIVGDQGLTYN----------T----TSTVNHMISNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQ 235 (472)
Q Consensus 170 ~~f~v~gD~~~~~~----------~----~~~l~~l~~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~ 235 (472)
|||++++|+|.... . .++++++.+.+|||||++||+++. |.. ..+
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~------~~~---------------~~~ 59 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDG------DNA---------------RAE 59 (267)
T ss_pred CeEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecC------CCc---------------hHH
Confidence 68999999995532 1 234556666789999999999952 110 012
Q ss_pred HHHHHHHHhhhhhhcCCCeEEeccccccc------ce----------e---------e--cc------------------
Q 048036 236 PRWDYWGRYMQPVLSKVPIMVVEGNHELD------FD----------I---------Y--IY------------------ 270 (472)
Q Consensus 236 ~~wd~~~~~i~~l~~~~P~~~v~GNHD~~------F~----------~---------y--id------------------ 270 (472)
..|+.+.+.++.+ .+|+++++||||.. +. + | ++
T Consensus 60 ~~~~~~~~~l~~l--~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~yysf~~~~~~~i~lds~~~~~~~~~~~~~~~~~ 137 (267)
T cd07396 60 EALDAVLAILDRL--KGPVHHVLGNHDLYNPSREYLLLYTLLGLGAPYYSFSPGGIRFIVLDGYDISALGRPEDTPKAEN 137 (267)
T ss_pred HHHHHHHHHHHhc--CCCEEEecCccccccccHhhhhcccccCCCCceEEEecCCcEEEEEeCCccccccCCCCChhhhh
Confidence 4556666655544 58999999999986 10 0 1 11
Q ss_pred ----------------------CChHHHHHHHHHHhcccCCCCCEEEEEecCCcccCCCCC---CCchHHHHHHhhhc--
Q 048036 271 ----------------------ITGDQYKWLEEDLVNVDREVTPWLVVTWHAPWYNTYKAH---YREAECMRVVAMED-- 323 (472)
Q Consensus 271 ----------------------~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~y~~~~~~---~~~~~~~r~~~le~-- 323 (472)
...+|++||+++|+++..+ ..++||++|+|++...... ..+.+.+.. ++++
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~~-~~~viV~~Hhp~~~~~~~~~~~~~~~~~~~~-ll~~~~ 215 (267)
T cd07396 138 ADDNSNLGLYLSEPRFVDWNGGIGEEQLQWLRNELQEADAN-GEKVIIFSHFPLHPESTSPHGLLWNHEEVLS-ILRAYG 215 (267)
T ss_pred HHHhchhhhhccCccceeccCcCCHHHHHHHHHHHHHHHhc-CCeEEEEEeccCCCCCCCccccccCHHHHHH-HHHhCC
Confidence 2368999999999986432 2458999999987654211 112334444 5655
Q ss_pred CceEEEeccccceeeeeecccCccCCCCCEEEEeCCCCC
Q 048036 324 GVDVVFNGHVHAYERSNRVYNYTLDPCGPIHITVGDGGN 362 (472)
Q Consensus 324 ~VdlvlsGH~H~Y~R~~p~~~~~~~~~g~vyiv~G~gG~ 362 (472)
+|+++|+||+|.++... .+|+.|+++|+-..
T Consensus 216 ~V~~v~~GH~H~~~~~~--------~~gi~~~~~~a~~~ 246 (267)
T cd07396 216 CVKACISGHDHEGGYAQ--------RHGIHFLTLEGMVE 246 (267)
T ss_pred CEEEEEcCCcCCCCccc--------cCCeeEEEechhhc
Confidence 89999999999987542 36888988877654
No 12
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=99.74 E-value=1.6e-16 Score=157.87 Aligned_cols=156 Identities=21% Similarity=0.310 Sum_probs=100.4
Q ss_pred CeEEEEEeecCCCC---------Ch----HHHHHHHHhC--CCCEEEEcCCcccccccccCCCCCCccccCCCCCCCccc
Q 048036 169 PSKIAIVGDQGLTY---------NT----TSTVNHMISN--RPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHET 233 (472)
Q Consensus 169 ~~~f~v~gD~~~~~---------~~----~~~l~~l~~~--~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~ 233 (472)
++||+.++|+|... +. .++++++.+. +|||||++||++.. |.
T Consensus 14 ~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~------~~----------------- 70 (275)
T PRK11148 14 RVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQD------HS----------------- 70 (275)
T ss_pred CEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCC------CC-----------------
Confidence 79999999999632 11 2345555443 69999999999941 21
Q ss_pred chHHHHHHHHhhhhhhcCCCeEEeccccccc------ce---e-------------e--cc----------CChHHHHHH
Q 048036 234 YQPRWDYWGRYMQPVLSKVPIMVVEGNHELD------FD---I-------------Y--IY----------ITGDQYKWL 279 (472)
Q Consensus 234 y~~~wd~~~~~i~~l~~~~P~~~v~GNHD~~------F~---~-------------y--id----------~~~~Q~~WL 279 (472)
...+..+.+.++.+ .+|+++++||||.. |. . + ++ ...+|++||
T Consensus 71 -~~~~~~~~~~l~~l--~~Pv~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Lds~~~g~~~G~l~~~ql~wL 147 (275)
T PRK11148 71 -SEAYQHFAEGIAPL--RKPCVWLPGNHDFQPAMYSALQDAGISPAKHVLIGEHWQILLLDSQVFGVPHGELSEYQLEWL 147 (275)
T ss_pred -HHHHHHHHHHHhhc--CCcEEEeCCCCCChHHHHHHHhhcCCCccceEEecCCEEEEEecCCCCCCcCCEeCHHHHHHH
Confidence 13455566666554 58999999999974 10 0 1 11 568999999
Q ss_pred HHHHhcccCCCCCEEEEEecCCcccCCCCC-----CCchHHHHHHhhhc--CceEEEeccccceeeeeecccCccCCCCC
Q 048036 280 EEDLVNVDREVTPWLVVTWHAPWYNTYKAH-----YREAECMRVVAMED--GVDVVFNGHVHAYERSNRVYNYTLDPCGP 352 (472)
Q Consensus 280 ~~~L~~~~r~~~pw~Iv~~H~P~y~~~~~~-----~~~~~~~r~~~le~--~VdlvlsGH~H~Y~R~~p~~~~~~~~~g~ 352 (472)
+++|++... ...||++|||+....... ..+.+.+.. ++++ +|+++|+||+|..... ..+|+
T Consensus 148 ~~~L~~~~~---~~~vv~~hH~P~~~~~~~~d~~~l~n~~~l~~-ll~~~~~v~~vl~GH~H~~~~~--------~~~gi 215 (275)
T PRK11148 148 ERKLADAPE---RHTLVLLHHHPLPAGCAWLDQHSLRNAHELAE-VLAKFPNVKAILCGHIHQELDL--------DWNGR 215 (275)
T ss_pred HHHHhhCCC---CCeEEEEcCCCCCCCcchhhccCCCCHHHHHH-HHhcCCCceEEEecccChHHhc--------eECCE
Confidence 999998632 235555655443222111 123344555 6666 8999999999985433 13577
Q ss_pred EEEEeCCCCC
Q 048036 353 IHITVGDGGN 362 (472)
Q Consensus 353 vyiv~G~gG~ 362 (472)
.++++++.+.
T Consensus 216 ~~~~~ps~~~ 225 (275)
T PRK11148 216 RLLATPSTCV 225 (275)
T ss_pred EEEEcCCCcC
Confidence 7777766654
No 13
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.70 E-value=1.3e-16 Score=156.97 Aligned_cols=153 Identities=19% Similarity=0.250 Sum_probs=103.5
Q ss_pred EEEEeecCCCCCh--------HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHHHHH
Q 048036 172 IAIVGDQGLTYNT--------TSTVNHMISNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDYWGR 243 (472)
Q Consensus 172 f~v~gD~~~~~~~--------~~~l~~l~~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~~~~ 243 (472)
|+.++|+|.+... ...++.+.+.+||++|++||++. .....+.. ...++.+|+.|++
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d--~~~~~~~~-------------~~~~~~~~~~~~~ 66 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTD--NKTGNKLP-------------SYQYQEEWQKYYN 66 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEcccccc--ccccCCCc-------------ccccHHHHHHHHH
Confidence 7889999986431 11234555679999999999994 22111110 1134568988888
Q ss_pred hhhhhhc--CCCeEEeccccccc----c----ee-------------------------ec--c----------------
Q 048036 244 YMQPVLS--KVPIMVVEGNHELD----F----DI-------------------------YI--Y---------------- 270 (472)
Q Consensus 244 ~i~~l~~--~~P~~~v~GNHD~~----F----~~-------------------------yi--d---------------- 270 (472)
.+..... ..|++.++||||+. + ++ ++ +
T Consensus 67 ~~~~~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~I~Ldt~~~~~~~~~~~~~g~ 146 (256)
T cd07401 67 ILKESSVINKEKWFDIRGNHDLFNIPSLDSENNYYRKYSATGRDGSFSFSHTTRFGNYSFIGVDPTLFPGPKRPFNFFGS 146 (256)
T ss_pred HHHHhCCCCcceEEEeCCCCCcCCCCCccchhhHHHHhheecCCCccceEEEecCCCEEEEEEcCccCCCCCCCCceecc
Confidence 7765432 58999999999985 0 00 10 1
Q ss_pred CChHHHHHHHHHHhcccCCCCCEEEEEecCCcccCCCCCCCchHHHHHHhhhc-CceEEEeccccceeeeeec
Q 048036 271 ITGDQYKWLEEDLVNVDREVTPWLVVTWHAPWYNTYKAHYREAECMRVVAMED-GVDVVFNGHVHAYERSNRV 342 (472)
Q Consensus 271 ~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~y~~~~~~~~~~~~~r~~~le~-~VdlvlsGH~H~Y~R~~p~ 342 (472)
...+|++||+++|++.. +.+|+||++|+|++............+.. +|++ +|+++||||+|.+++..|+
T Consensus 147 l~~~ql~wL~~~L~~~~--~~~~~IV~~HhP~~~~~~~~~~~~~~~~~-ll~~~~v~~vl~GH~H~~~~~~p~ 216 (256)
T cd07401 147 LDKKLLDRLEKELEKST--NSNYTIWFGHYPTSTIISPSAKSSSKFKD-LLKKYNVTAYLCGHLHPLGGLEPV 216 (256)
T ss_pred CCHHHHHHHHHHHHhcc--cCCeEEEEEcccchhccCCCcchhHHHHH-HHHhcCCcEEEeCCccCCCcceee
Confidence 44899999999999763 34589999999987532211111222555 6777 9999999999999996676
No 14
>COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism]
Probab=99.68 E-value=3.3e-16 Score=159.90 Aligned_cols=189 Identities=19% Similarity=0.273 Sum_probs=124.9
Q ss_pred cCCC-CeeEEEEEcCCCcccCCCCCCCCCCCCcEEEEeccCCCCccEEEEEEEEEeeeeccCCccccccCcEEEEEeCCC
Q 048036 55 SSTH-DSVWISWITGEFQIGNNIKPLDPKIIASVVRYATRRSQLNRKATGHSLVYNQLYPFLGLQNYTSGIIHHVRLTGL 133 (472)
Q Consensus 55 ~~d~-~s~~V~W~T~~~~~g~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~~~h~v~l~gL 133 (472)
++|| ..-.|-|.--++.. .+.. ....-.++|+++++..+.+..|+..+ .....+.+++.+.||
T Consensus 45 SGDp~~~svviWTRl~P~p-~~~g----~~v~V~wEvs~~~~f~~ivr~gt~~a-----------~p~~dhtv~v~~~gL 108 (522)
T COG3540 45 SGDPTATSVVIWTRLDPEP-LNGG----RPVPVIWEVSTDENFSNIVRKGTVIA-----------SPELDHTVHVDLRGL 108 (522)
T ss_pred cCCCCCCeEEEEEccCCcc-ccCC----CCcceEEEecCCccHHHHHhcCCccC-----------CcccCceEEEeccCC
Confidence 3677 46777887655311 0000 01234678887775444333333211 011357899999999
Q ss_pred CCCCEEEEEEecCCCCCccceeEEEcCCCCCCCCCCeEEEEEeecCC---CCChHHHHHHHHhCCCCEEEEcCCcccccc
Q 048036 134 KPDTLYYYQCGDPSIPAMSGTYYFRTMPDSSPTSYPSKIAIVGDQGL---TYNTTSTVNHMISNRPDLILLVGDVTYSNL 210 (472)
Q Consensus 134 ~p~t~Y~Yrv~~~~~~~~S~~~~F~T~p~~~~~~~~~~f~v~gD~~~---~~~~~~~l~~l~~~~~Dfvl~~GDl~y~d~ 210 (472)
+|++.|+||+..++ ..|.+++|||+|+.+. .++++.++|... ..+...+.+.|.+.++||+||+||.+|+++
T Consensus 109 ~P~~~yfYRf~~~~--~~spvGrtrTapa~~~---~i~~~~fa~ascQ~~~~gy~~aY~~ma~~~~D~viH~GDyIYeyg 183 (522)
T COG3540 109 SPDQDYFYRFKAGD--ERSPVGRTRTAPAPGR---AIRFVWFADASCQGWEIGYMTAYKTMAKEEPDFVIHLGDYIYEYG 183 (522)
T ss_pred CCCceEEEEEeeCC--ccccccccccCCCCCC---cchhhhhhhccccccccchhHHHHHHHhcCCCEEEEcCCeeeccC
Confidence 99999999999875 6789999999999875 567777777643 334567888999999999999999999976
Q ss_pred cccCCCCCCcccc-CCCCCC-----CcccchHHHHHHH--HhhhhhhcCCCeEEeccccccc
Q 048036 211 YLTNGTGSNCYSC-SFANSP-----IHETYQPRWDYWG--RYMQPVLSKVPIMVVEGNHELD 264 (472)
Q Consensus 211 ~~~~G~~~~~~~~-~~~~~~-----~~e~y~~~wd~~~--~~i~~l~~~~P~~~v~GNHD~~ 264 (472)
....-...+.++. ..+..+ ..++|+.+|..+. ..++...+.+||++.+..||..
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~ei~TLddYR~rya~y~~D~nLqaahA~~Pwi~~WDDHEv~ 245 (522)
T COG3540 184 PIPDEVSLNSWKNVVVTQHKSKEIETLDDYRGRYAYYKTDENLQAAHAAFPWIVQWDDHEVA 245 (522)
T ss_pred CcccccccccccccccCCCCCcceeeHHHHhhHHhhhcccHHHHHhhccCCEEEEecccccc
Confidence 4211000000111 112222 3346888887764 4667778899999999999987
No 15
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=99.66 E-value=1.8e-15 Score=142.99 Aligned_cols=147 Identities=20% Similarity=0.248 Sum_probs=94.0
Q ss_pred CeEEEEEeecCCCCCh------------HHHHHH-HHhCCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccch
Q 048036 169 PSKIAIVGDQGLTYNT------------TSTVNH-MISNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQ 235 (472)
Q Consensus 169 ~~~f~v~gD~~~~~~~------------~~~l~~-l~~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~ 235 (472)
.+||++++|+|..... .+.+++ +.+.+||+||++||+++.... .+...
T Consensus 2 ~~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~-------------------~~~~~ 62 (199)
T cd07383 2 KFKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENT-------------------NDNST 62 (199)
T ss_pred ceEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCC-------------------chHHH
Confidence 5899999999986431 122333 234689999999999963211 00012
Q ss_pred HHHHHHHHhhhhhhcCCCeEEecccccccceeeccCChHHHHHHHHHHhccc--CCCCCEEEEEecCCcccCCCC-----
Q 048036 236 PRWDYWGRYMQPVLSKVPIMVVEGNHELDFDIYIYITGDQYKWLEEDLVNVD--REVTPWLVVTWHAPWYNTYKA----- 308 (472)
Q Consensus 236 ~~wd~~~~~i~~l~~~~P~~~v~GNHD~~F~~yid~~~~Q~~WL~~~L~~~~--r~~~pw~Iv~~H~P~y~~~~~----- 308 (472)
..|..+++.+. ...+|+++++||||.. --....|++||+++|++.. +....+.++++|+|+......
T Consensus 63 ~~~~~~~~~l~--~~~~p~~~~~GNHD~~----g~l~~~ql~wL~~~l~~~~~~~~~~~~~l~f~H~P~~~~~~~~~~~~ 136 (199)
T cd07383 63 SALDKAVSPMI--DRKIPWAATFGNHDGY----DWIRPSQIEWFKETSAALKKKYGKPIPSLAFFHIPLPEYREVWEGKG 136 (199)
T ss_pred HHHHHHHHHHH--HcCCCEEEECccCCCC----CCCCHHHHHHHHHHHHHHhhccCCCCcceEEEecChHHHHhhhcccC
Confidence 34444443332 2369999999999942 1167899999999999863 223457999999998653210
Q ss_pred ----CC--------CchHHHHHHhhhc-CceEEEeccccceeeeee
Q 048036 309 ----HY--------REAECMRVVAMED-GVDVVFNGHVHAYERSNR 341 (472)
Q Consensus 309 ----~~--------~~~~~~r~~~le~-~VdlvlsGH~H~Y~R~~p 341 (472)
.. .+...+.. +++. +|+++|+||+|.++....
T Consensus 137 ~~~g~~~d~~~~~~~~~~~~~~-~~~~~~v~~v~~GH~H~~~~~~~ 181 (199)
T cd07383 137 KVPGINNEKVCCPKINSGLFKA-LLERGDVKGVFCGHDHGNDFCGR 181 (199)
T ss_pred CCCccCCcccCCCcCCcHHHHH-HHHcCCeEEEEeCCCCCcceecc
Confidence 00 01112222 3333 999999999999876543
No 16
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.65 E-value=9.7e-16 Score=136.21 Aligned_cols=140 Identities=23% Similarity=0.402 Sum_probs=84.6
Q ss_pred eEEEEEeecCCCCChH-----HHHHHHHhCCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHHHH-H
Q 048036 170 SKIAIVGDQGLTYNTT-----STVNHMISNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDYWG-R 243 (472)
Q Consensus 170 ~~f~v~gD~~~~~~~~-----~~l~~l~~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~~~-~ 243 (472)
+||+++||+|...... .......+.++|+||++||+++.... ...+.... .
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~-----------------------~~~~~~~~~~ 57 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNP-----------------------SEEWRAQFWF 57 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSH-----------------------HHHHHHHHHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccc-----------------------cccchhhhcc
Confidence 6999999999875432 22333445799999999999963211 11111111 1
Q ss_pred hhhhhhcCCCeEEecccccccce-------------e-------e---------------c------c---CC---hHHH
Q 048036 244 YMQPVLSKVPIMVVEGNHELDFD-------------I-------Y---------------I------Y---IT---GDQY 276 (472)
Q Consensus 244 ~i~~l~~~~P~~~v~GNHD~~F~-------------~-------y---------------i------d---~~---~~Q~ 276 (472)
........+|+++++||||+... . + . . .. ..+.
T Consensus 58 ~~~~~~~~~~~~~~~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (200)
T PF00149_consen 58 FIRLLNPKIPVYFILGNHDYYSGNSFYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWW 137 (200)
T ss_dssp HHHHHHTTTTEEEEE-TTSSHHHHHHHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHH
T ss_pred chhhhhccccccccccccccceeccccccccccccccccccccccccCcceeeecccccccccccccccccccccchhcc
Confidence 23344678999999999998700 0 0 0 0 12 2333
Q ss_pred HHHHHHHhcccCCCCCEEEEEecCCcccCCCCCC------CchHHHHHHhhhc-CceEEEeccccce
Q 048036 277 KWLEEDLVNVDREVTPWLVVTWHAPWYNTYKAHY------REAECMRVVAMED-GVDVVFNGHVHAY 336 (472)
Q Consensus 277 ~WL~~~L~~~~r~~~pw~Iv~~H~P~y~~~~~~~------~~~~~~r~~~le~-~VdlvlsGH~H~Y 336 (472)
.|+...++. ...+|+||++|+|+++...... ...+.+.. +++. +|+++|+||+|.|
T Consensus 138 ~~~~~~~~~---~~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 138 LWLLLLLEA---KNDDPVIVFTHHPPYSSSSDSSSYGNESKGREALEE-LLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp HHHHHHHHE---EEESEEEEEESSSSSTTSSSTHHHSSEEEHHHHHHH-HHHHTTCSEEEEESSSSE
T ss_pred ccccccccc---ccccceeEEEecCCCCccccccccchhhccHHHHHH-HHhhCCCCEEEeCceecC
Confidence 333333333 3456899999999998654321 11122333 4444 9999999999987
No 17
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=99.50 E-value=2.4e-13 Score=131.79 Aligned_cols=80 Identities=21% Similarity=0.251 Sum_probs=56.1
Q ss_pred hHHHHHHHHHHhcccCC-CCCEEEEEecCCcccCCCCCCCchHHHHHHhhhc-CceEEEeccccceeeeeecccCccCCC
Q 048036 273 GDQYKWLEEDLVNVDRE-VTPWLVVTWHAPWYNTYKAHYREAECMRVVAMED-GVDVVFNGHVHAYERSNRVYNYTLDPC 350 (472)
Q Consensus 273 ~~Q~~WL~~~L~~~~r~-~~pw~Iv~~H~P~y~~~~~~~~~~~~~r~~~le~-~VdlvlsGH~H~Y~R~~p~~~~~~~~~ 350 (472)
.+|++||++.|+++... ...++|+++|+|++.... +...+.. .+++ ++|++|+||+|.+++..|+... -+
T Consensus 145 ~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~~----~~~~~~~-~~~~~~v~~vl~GH~H~~~~~~~~~~~---~~ 216 (232)
T cd07393 145 ERELERLELSLKAAKKREKEKIKIVMLHYPPANENG----DDSPISK-LIEEYGVDICVYGHLHGVGRDRAINGE---RG 216 (232)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCEEEEECCCCcCCCC----CHHHHHH-HHHHcCCCEEEECCCCCCcccccccce---EC
Confidence 45899999999976422 224689999999886532 2233444 5556 9999999999999988776331 35
Q ss_pred CCEEEEeCCC
Q 048036 351 GPIHITVGDG 360 (472)
Q Consensus 351 g~vyiv~G~g 360 (472)
|+.|+++.++
T Consensus 217 gi~~~~~~~~ 226 (232)
T cd07393 217 GIRYQLVSAD 226 (232)
T ss_pred CEEEEEEcch
Confidence 7777765444
No 18
>PF14008 Metallophos_C: Iron/zinc purple acid phosphatase-like protein C; PDB: 3KBP_B 1KBP_B 4KBP_C 2QFP_B 2QFR_A 1XZW_B.
Probab=99.48 E-value=6e-14 Score=107.74 Aligned_cols=43 Identities=42% Similarity=0.701 Sum_probs=31.9
Q ss_pred CCCCCccceeeCCccEEEEEEecCCcEEEEEEEecCCcceeeEEE
Q 048036 410 DRQPDYSAFRESTFGHGILEVKNETHALWTWHRNQDFYGAVGDQI 454 (472)
Q Consensus 410 ~~~~~~s~~~~~~~G~~~l~v~n~t~l~~~~~~~~~~~~~v~D~f 454 (472)
.++|+|+++|..+|||++|+|.|.|||+|||+++.++ +|+|+|
T Consensus 20 ~~~~~wsa~r~~~~Gy~~l~v~N~T~l~~e~i~~~~g--~v~D~f 62 (62)
T PF14008_consen 20 YPPPEWSAFRDSEYGYGRLTVANATHLHWEFIRSDDG--SVLDEF 62 (62)
T ss_dssp SS--TTEEEEE---EEEEEEE-SSSEEEEEEEETTS---T-CEE-
T ss_pred CCCCCeeeeeccccCEEEEEEEcCCeEEEEEEECCCC--cEecCC
Confidence 3568999999999999999999999999999998776 899998
No 19
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=99.43 E-value=1.8e-12 Score=115.77 Aligned_cols=128 Identities=24% Similarity=0.402 Sum_probs=83.3
Q ss_pred EEEEeecCCCCChH-----------HHHHHHHhCCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHH
Q 048036 172 IAIVGDQGLTYNTT-----------STVNHMISNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDY 240 (472)
Q Consensus 172 f~v~gD~~~~~~~~-----------~~l~~l~~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~ 240 (472)
|+.++|+|.+.... ..++.+.+.++|+|+++||+++. +. +..|+.
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~------~~------------------~~~~~~ 56 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQR------GL------------------PEEFEE 56 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCC------CC------------------HHHHHH
Confidence 57899999864321 12334456799999999999962 11 234556
Q ss_pred HHHhhhhhhcC-CCeEEecccccccceeeccCChHHHHHHHHHHhcccCCCCCEEEEEecCCcccCCCCCC---CchHHH
Q 048036 241 WGRYMQPVLSK-VPIMVVEGNHELDFDIYIYITGDQYKWLEEDLVNVDREVTPWLVVTWHAPWYNTYKAHY---REAECM 316 (472)
Q Consensus 241 ~~~~i~~l~~~-~P~~~v~GNHD~~F~~yid~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~y~~~~~~~---~~~~~~ 316 (472)
+.+.++.+... +|++.++|||| . |+++|+|++....... ...+.+
T Consensus 57 ~~~~~~~l~~~~~~~~~v~GNHD--------~-----------------------iv~~Hhp~~~~~~~~~~~~~~~~~~ 105 (144)
T cd07400 57 AREFLDALPAPLEPVLVVPGNHD--------V-----------------------IVVLHHPLVPPPGSGRERLLDAGDA 105 (144)
T ss_pred HHHHHHHccccCCcEEEeCCCCe--------E-----------------------EEEecCCCCCCCccccccCCCHHHH
Confidence 66666665433 69999999998 1 8899999876533211 122344
Q ss_pred HHHhhhc-CceEEEeccccceeeeeecccCccCCCCCEEEEeCC
Q 048036 317 RVVAMED-GVDVVFNGHVHAYERSNRVYNYTLDPCGPIHITVGD 359 (472)
Q Consensus 317 r~~~le~-~VdlvlsGH~H~Y~R~~p~~~~~~~~~g~vyiv~G~ 359 (472)
.. .+++ +++++|+||+|...... +.+ ..+++.++.+|+
T Consensus 106 ~~-~l~~~~~~~~l~GH~H~~~~~~-~~~---~~~~~~~~~aGs 144 (144)
T cd07400 106 LK-LLAEAGVDLVLHGHKHVPYVGN-ISN---AGGGLVVIGAGT 144 (144)
T ss_pred HH-HHHHcCCCEEEECCCCCcCeee-ccC---CCCCEEEEecCC
Confidence 54 5666 99999999999965432 111 235667776664
No 20
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=99.38 E-value=3e-12 Score=125.92 Aligned_cols=134 Identities=17% Similarity=0.291 Sum_probs=81.3
Q ss_pred HHHHHHHh-CCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHhhhhhhcCCCeEEeccccccc
Q 048036 186 STVNHMIS-NRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDYWGRYMQPVLSKVPIMVVEGNHELD 264 (472)
Q Consensus 186 ~~l~~l~~-~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~~~~~i~~l~~~~P~~~v~GNHD~~ 264 (472)
+.++.+.+ .+||+||++||++.. |.... .+.|...++.|.+.+.++...+|++.++||||+.
T Consensus 35 ~~~~~~~~~l~PD~vv~lGDL~d~------G~~~~-----------~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig 97 (257)
T cd08163 35 RNWRYMQKQLKPDSTIFLGDLFDG------GRDWA-----------DEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIG 97 (257)
T ss_pred HHHHHHHHhcCCCEEEEecccccC------CeeCc-----------HHHHHHHHHHHHHHhcCCCccceEEEeCCCcccC
Confidence 34445544 589999999999842 32100 0111122333444444433458999999999975
Q ss_pred ce----------------e-----------ec--c-----------CChHHHHHHHHHHhcccCCCCCEEEEEecCCccc
Q 048036 265 FD----------------I-----------YI--Y-----------ITGDQYKWLEEDLVNVDREVTPWLVVTWHAPWYN 304 (472)
Q Consensus 265 F~----------------~-----------yi--d-----------~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~y~ 304 (472)
|. . |+ + ...+|.+||++.|+....+ . .+|+++|+|+|.
T Consensus 98 ~~~~~~~~~~~rf~~~Fg~~~~~~~~~~~~fV~Lds~~l~~~~~~~~~~~~~~~l~~~l~~~~~~-~-p~ILl~H~Plyr 175 (257)
T cd08163 98 FGNGVVLPVRQRFEKYFGPTSRVIDVGNHTFVILDTISLSNKDDPDVYQPPREFLHSFSAMKVKS-K-PRILLTHVPLYR 175 (257)
T ss_pred CCCCCCHHHHHHHHHHhCCCceEEEECCEEEEEEccccccCCcccccchhHHHHHHhhhhccCCC-C-cEEEEecccccc
Confidence 21 0 21 1 4467999999999875322 2 389999999986
Q ss_pred CCCCC-------C-----------C---chHHHHHHhhhc-CceEEEeccccceeee
Q 048036 305 TYKAH-------Y-----------R---EAECMRVVAMED-GVDVVFNGHVHAYERS 339 (472)
Q Consensus 305 ~~~~~-------~-----------~---~~~~~r~~~le~-~VdlvlsGH~H~Y~R~ 339 (472)
..... + . +.+.-.. +|+. ++.+||+||+|.|=..
T Consensus 176 ~~~~~cg~~re~~~~~~~~~g~~yq~~l~~~~s~~-il~~~~P~~vfsGhdH~~C~~ 231 (257)
T cd08163 176 PPNTSCGPLRESKTPLPYGYGYQYQNLLEPSLSEV-ILKAVQPVIAFSGDDHDYCEV 231 (257)
T ss_pred CCCCCCCCccccCCCCCCCCCccceeecCHHHHHH-HHHhhCCcEEEecCCCcccee
Confidence 43210 0 0 0011122 5666 9999999999997554
No 21
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=99.38 E-value=4e-12 Score=121.69 Aligned_cols=134 Identities=21% Similarity=0.212 Sum_probs=89.4
Q ss_pred CeEEEEEeecCCCCCh-----HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHHHHH
Q 048036 169 PSKIAIVGDQGLTYNT-----TSTVNHMISNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDYWGR 243 (472)
Q Consensus 169 ~~~f~v~gD~~~~~~~-----~~~l~~l~~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~~~~ 243 (472)
++||++++|+|..... .+.++.+.+.+||++|++||+++.. .. .. +.+.+
T Consensus 1 ~~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~------~~------------------~~-~~~~~ 55 (223)
T cd07385 1 GLRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGS------VD------------------VL-ELLLE 55 (223)
T ss_pred CCEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCc------ch------------------hh-HHHHH
Confidence 3799999999987532 3445556667999999999999521 10 00 23445
Q ss_pred hhhhhhcCCCeEEecccccccce-----e---------ec-------c------------CChHHHHHHHHHHhcccCCC
Q 048036 244 YMQPVLSKVPIMVVEGNHELDFD-----I---------YI-------Y------------ITGDQYKWLEEDLVNVDREV 290 (472)
Q Consensus 244 ~i~~l~~~~P~~~v~GNHD~~F~-----~---------yi-------d------------~~~~Q~~WL~~~L~~~~r~~ 290 (472)
.++.+....|+++++||||+... . ++ . ......+++.+.+++.+ .
T Consensus 56 ~l~~l~~~~~v~~v~GNHD~~~~~~~~~~~~l~~~~v~~L~~~~~~~~~~~~~i~i~G~~~~~~~~~~~~~~~~~~~--~ 133 (223)
T cd07385 56 LLKKLKAPLGVYAVLGNHDYYSGDEENWIEALESAGITVLRNESVEISVGGATIGIAGVDDGLGRRPDLEKALKGLD--E 133 (223)
T ss_pred HHhccCCCCCEEEECCCcccccCchHHHHHHHHHcCCEEeecCcEEeccCCeEEEEEeccCccccCCCHHHHHhCCC--C
Confidence 55555567899999999998611 0 00 0 12334566777776643 2
Q ss_pred CCEEEEEecCCcccCCCCCCCchHHHHHHhhhc-CceEEEeccccceeeeeecc
Q 048036 291 TPWLVVTWHAPWYNTYKAHYREAECMRVVAMED-GVDVVFNGHVHAYERSNRVY 343 (472)
Q Consensus 291 ~pw~Iv~~H~P~y~~~~~~~~~~~~~r~~~le~-~VdlvlsGH~H~Y~R~~p~~ 343 (472)
....|++.|.|.+.. .+.. ++|++|+||+|..|...|..
T Consensus 134 ~~~~I~l~H~P~~~~--------------~~~~~~~dl~l~GHtHggqi~~~~~ 173 (223)
T cd07385 134 DDPNILLAHQPDTAE--------------EAAAWGVDLQLSGHTHGGQIRLPGI 173 (223)
T ss_pred CCCEEEEecCCChhH--------------HhcccCccEEEeccCCCCEEecccc
Confidence 346899999985421 1233 89999999999998776643
No 22
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=99.37 E-value=6e-12 Score=116.73 Aligned_cols=133 Identities=19% Similarity=0.271 Sum_probs=82.3
Q ss_pred EEEEeecCCCCChHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHhhhhhhcC
Q 048036 172 IAIVGDQGLTYNTTSTVNHMISNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDYWGRYMQPVLSK 251 (472)
Q Consensus 172 f~v~gD~~~~~~~~~~l~~l~~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~~~~~i~~l~~~ 251 (472)
|+++||+|.+...... ..+.+.++|+||++||+++. +.. .....+ +.++. ..
T Consensus 1 i~~~sD~H~~~~~~~~-~~~~~~~~D~vv~~GDl~~~------~~~------------------~~~~~~-~~l~~--~~ 52 (188)
T cd07392 1 ILAISDIHGDVEKLEA-IILKAEEADAVIVAGDITNF------GGK------------------EAAVEI-NLLLA--IG 52 (188)
T ss_pred CEEEEecCCCHHHHHH-HHhhccCCCEEEECCCccCc------CCH------------------HHHHHH-HHHHh--cC
Confidence 5789999986543222 34556789999999999952 210 111111 33332 36
Q ss_pred CCeEEeccccccc----c------ee-----------ec--c------------CChHHHHHHHHHHhcccCCCCCEEEE
Q 048036 252 VPIMVVEGNHELD----F------DI-----------YI--Y------------ITGDQYKWLEEDLVNVDREVTPWLVV 296 (472)
Q Consensus 252 ~P~~~v~GNHD~~----F------~~-----------yi--d------------~~~~Q~~WL~~~L~~~~r~~~pw~Iv 296 (472)
+|+++++||||.. + .. ++ + ...+|++|+ +.|+.. ..+.+|+
T Consensus 53 ~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~l~~~---~~~~~il 128 (188)
T cd07392 53 VPVLAVPGNCDTPEILGLLTSAGLNLHGKVVEVGGYTFVGIGGSNPTPFNTPIELSEEEIVSD-GRLNNL---LAKNLIL 128 (188)
T ss_pred CCEEEEcCCCCCHHHHHhhhcCcEecCCCEEEECCEEEEEeCCCCCCCCCCccccCHHHHHHh-hhhhcc---CCCCeEE
Confidence 8999999999975 1 00 11 0 345788888 444432 2234899
Q ss_pred EecCCcccC-CCCCC----CchHHHHHHhhhc-CceEEEecccccee
Q 048036 297 TWHAPWYNT-YKAHY----REAECMRVVAMED-GVDVVFNGHVHAYE 337 (472)
Q Consensus 297 ~~H~P~y~~-~~~~~----~~~~~~r~~~le~-~VdlvlsGH~H~Y~ 337 (472)
++|+|++.. ..... .....+.. ++++ +++++|+||+|.-.
T Consensus 129 v~H~pp~~~~~d~~~~~~~~g~~~l~~-li~~~~~~~~l~GH~H~~~ 174 (188)
T cd07392 129 VTHAPPYGTAVDRVSGGFHVGSKAIRK-FIEERQPLLCICGHIHESR 174 (188)
T ss_pred EECCCCcCCcccccCCCCccCCHHHHH-HHHHhCCcEEEEecccccc
Confidence 999999763 11111 12344555 6666 89999999999853
No 23
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=99.33 E-value=9.8e-12 Score=124.62 Aligned_cols=147 Identities=22% Similarity=0.272 Sum_probs=94.5
Q ss_pred EEeecCCCCC---hHHHHHHHHhC--CCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchH--HHHHHHHhhh
Q 048036 174 IVGDQGLTYN---TTSTVNHMISN--RPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQP--RWDYWGRYMQ 246 (472)
Q Consensus 174 v~gD~~~~~~---~~~~l~~l~~~--~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~--~wd~~~~~i~ 246 (472)
-+|+.+.... ..++++.+.+. +|||||++||++..+.... . . .... .+..+.+.++
T Consensus 42 ~~G~~~CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~--~--------------~-~~~~~~~~~~~~~~l~ 104 (296)
T cd00842 42 PWGDYGCDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQ--T--------------P-ETLVLISISNLTSLLK 104 (296)
T ss_pred CCcCcCCCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhh--c--------------h-hHHHHHHHHHHHHHHH
Confidence 4677765432 23456677766 8999999999996432100 0 0 0011 2556666677
Q ss_pred hhhcCCCeEEeccccccc----ce-----------------------------e---e----------c--c--------
Q 048036 247 PVLSKVPIMVVEGNHELD----FD-----------------------------I---Y----------I--Y-------- 270 (472)
Q Consensus 247 ~l~~~~P~~~v~GNHD~~----F~-----------------------------~---y----------i--d-------- 270 (472)
.....+|+++++||||.. |. . | + +
T Consensus 105 ~~~~~~pv~~~~GNHD~~p~~~~~~~~~~~~~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~ 184 (296)
T cd00842 105 KAFPDTPVYPALGNHDSYPVNQFPPNNSPSWLYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKN 184 (296)
T ss_pred HhCCCCCEEEcCCCCCCCcccccCCcccccHHHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccC
Confidence 666789999999999984 10 0 1 0 0
Q ss_pred ---------CChHHHHHHHHHHhcccCCCCCEEEEEecCCcccCCCCCC-CchHHHHHHhhhc---CceEEEecccccee
Q 048036 271 ---------ITGDQYKWLEEDLVNVDREVTPWLVVTWHAPWYNTYKAHY-REAECMRVVAMED---GVDVVFNGHVHAYE 337 (472)
Q Consensus 271 ---------~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~y~~~~~~~-~~~~~~r~~~le~---~VdlvlsGH~H~Y~ 337 (472)
...+|++||+++|+++.+.. ..+||++|+|++....... ...+.+.. ++++ .|.++|+||+|..+
T Consensus 185 ~~~~~~~~~~~~~Ql~WL~~~L~~a~~~~-~~v~I~~HiPp~~~~~~~~~~~~~~~~~-ii~~y~~~i~~~~~GH~H~d~ 262 (296)
T cd00842 185 FWLLGSNETDPAGQLQWLEDELQEAEQAG-EKVWIIGHIPPGVNSYDTLENWSERYLQ-IINRYSDTIAGQFFGHTHRDE 262 (296)
T ss_pred hhhhccCCCCHHHHHHHHHHHHHHHHHCC-CeEEEEeccCCCCcccccchHHHHHHHH-HHHHHHHhhheeeecccccce
Confidence 13789999999999875332 3478899999986532210 12233444 5666 37889999999965
Q ss_pred ee
Q 048036 338 RS 339 (472)
Q Consensus 338 R~ 339 (472)
-.
T Consensus 263 ~~ 264 (296)
T cd00842 263 FR 264 (296)
T ss_pred EE
Confidence 54
No 24
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=99.33 E-value=2.6e-12 Score=117.73 Aligned_cols=132 Identities=21% Similarity=0.271 Sum_probs=79.6
Q ss_pred EEEEeecCCCCChHHH-H-HHHHhCCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHhhhhhh
Q 048036 172 IAIVGDQGLTYNTTST-V-NHMISNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDYWGRYMQPVL 249 (472)
Q Consensus 172 f~v~gD~~~~~~~~~~-l-~~l~~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~~~~~i~~l~ 249 (472)
|++++|+|.+....+. + +.+.+.++|+++++||+++. +. ...+.. ......
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~------~~------------------~~~~~~---~~~~~~ 53 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYL------TD------------------APRFAP---LLLALK 53 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCC------cc------------------hHHHHH---HHHhhc
Confidence 5789999987543322 1 22344689999999999952 11 011211 222234
Q ss_pred cCCCeEEeccccccc--c---eeecc---CChHHHHHHHHHHhcccCCCCCEEEEEecCCcccCCCCC---CC--chH--
Q 048036 250 SKVPIMVVEGNHELD--F---DIYIY---ITGDQYKWLEEDLVNVDREVTPWLVVTWHAPWYNTYKAH---YR--EAE-- 314 (472)
Q Consensus 250 ~~~P~~~v~GNHD~~--F---~~yid---~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~y~~~~~~---~~--~~~-- 314 (472)
...|+++++||||+. | ..+.+ ...++.+|+.++++ +.+||++|+|++...... .. ...
T Consensus 54 ~~~~v~~v~GNHD~~~~~~G~~~w~~~~~~~~~~~~~~~~d~~-------~~~vv~~HhpP~~~~~~~~~~~~~~~~~~~ 126 (166)
T cd07404 54 GFEPVIYVPGNHEFYVRIIGTTLWSDISLFGEAAARMRMNDFR-------GKTVVVTHHAPSPLSLAPQYGDSLVNAAFA 126 (166)
T ss_pred CCccEEEeCCCcceEEEEEeeecccccCccchHHHHhCCCCCC-------CCEEEEeCCCCCccccCccccCCCcchhhh
Confidence 568999999999985 1 11112 34556666666655 238999999988653211 11 111
Q ss_pred -HHHHHhhhc-CceEEEeccccceee
Q 048036 315 -CMRVVAMED-GVDVVFNGHVHAYER 338 (472)
Q Consensus 315 -~~r~~~le~-~VdlvlsGH~H~Y~R 338 (472)
.++. ++++ +|+++++||+|....
T Consensus 127 ~~l~~-~~~~~~v~~~i~GH~H~~~~ 151 (166)
T cd07404 127 VDLDD-LILADPIDLWIHGHTHFNFD 151 (166)
T ss_pred hccHh-HHhhcCCCEEEECCccccce
Confidence 1333 4455 999999999998643
No 25
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=99.27 E-value=4.2e-11 Score=116.49 Aligned_cols=136 Identities=18% Similarity=0.227 Sum_probs=86.6
Q ss_pred EEEEEeecCCCCCh---H----HHHHHHHhCCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHHHHH
Q 048036 171 KIAIVGDQGLTYNT---T----STVNHMISNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDYWGR 243 (472)
Q Consensus 171 ~f~v~gD~~~~~~~---~----~~l~~l~~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~~~~ 243 (472)
||++++|+|..... . ..++.+.+.++|+||++||++.. . .....+++
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~--~------------------------~~~~~~~~ 54 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISND--F------------------------QRSLPFIE 54 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccc--h------------------------hhHHHHHH
Confidence 58999999965321 2 24455666789999999999931 0 01123444
Q ss_pred hhhhhhcCCCeEEeccccccc-------c----ee----------------ecc--------------------------
Q 048036 244 YMQPVLSKVPIMVVEGNHELD-------F----DI----------------YIY-------------------------- 270 (472)
Q Consensus 244 ~i~~l~~~~P~~~v~GNHD~~-------F----~~----------------yid-------------------------- 270 (472)
.+..+ ..+|++.++||||+. + +. |+.
T Consensus 55 ~l~~~-~~~pv~~v~GNHD~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ig~~gw~d~~~~~~~~~~~~~~~~~d~~ 133 (239)
T TIGR03729 55 KLQEL-KGIKVTFNAGNHDMLKDLTYEEIESNDSPLYLHNRFIDIPNTQWRIIGNNGWYDYSFSNDKTSKEILRWKKSFW 133 (239)
T ss_pred HHHHh-cCCcEEEECCCCCCCCCCCHHHHHhccchhhhcccccccCCCceEEEeeccceecccccccCHHHHHHhhhcEE
Confidence 34332 458999999999963 1 00 000
Q ss_pred -------------CChHHHHHHHHHHhcccCCCCCEEEEEecCCcccCCC------CCCC------chHHHHHHhhhc-C
Q 048036 271 -------------ITGDQYKWLEEDLVNVDREVTPWLVVTWHAPWYNTYK------AHYR------EAECMRVVAMED-G 324 (472)
Q Consensus 271 -------------~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~y~~~~------~~~~------~~~~~r~~~le~-~ 324 (472)
...+|++||++.|++.... .+|+++|+|+..... ..+. ....+.. ++++ +
T Consensus 134 ~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~---~~ivvtH~pP~~~~~~~~~~~~~~~~~~~~~~s~~l~~-li~~~~ 209 (239)
T TIGR03729 134 FDRRIKRPMSDPERTAIVLKQLKKQLNQLDNK---QVIFVTHFVPHRDFIYVPMDHRRFDMFNAFLGSQHFGQ-LLVKYE 209 (239)
T ss_pred eecccCCCCChHHHHHHHHHHHHHHHHhcCCC---CEEEEEcccchHHHhcCCCCCcchhhhhhccChHHHHH-HHHHhC
Confidence 2256789999999876322 289999998754211 1111 1234555 5666 9
Q ss_pred ceEEEecccccee
Q 048036 325 VDVVFNGHVHAYE 337 (472)
Q Consensus 325 VdlvlsGH~H~Y~ 337 (472)
|+++|+||+|.-.
T Consensus 210 v~~~i~GH~H~~~ 222 (239)
T TIGR03729 210 IKDVIFGHLHRRF 222 (239)
T ss_pred CCEEEECCccCCC
Confidence 9999999999854
No 26
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=99.27 E-value=5.7e-11 Score=113.30 Aligned_cols=144 Identities=17% Similarity=0.159 Sum_probs=85.5
Q ss_pred EEEEEeecCCCCCh----------------HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccc
Q 048036 171 KIAIVGDQGLTYNT----------------TSTVNHMISNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETY 234 (472)
Q Consensus 171 ~f~v~gD~~~~~~~----------------~~~l~~l~~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y 234 (472)
||++++|+|.+... .+.++.+.+.++|+||++||++.... ..
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~----~~------------------ 58 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNN----PS------------------ 58 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCC----CC------------------
Confidence 58999999987421 22334444579999999999985211 00
Q ss_pred hHHHHHHHHhhhhhh-cCCCeEEeccccccc---------------ce-----e---------------ec--c-----C
Q 048036 235 QPRWDYWGRYMQPVL-SKVPIMVVEGNHELD---------------FD-----I---------------YI--Y-----I 271 (472)
Q Consensus 235 ~~~wd~~~~~i~~l~-~~~P~~~v~GNHD~~---------------F~-----~---------------yi--d-----~ 271 (472)
...+..+.+.++.+. ..+|+++++||||.. +. . +. + .
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~v~~~~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~~~~~~ 138 (223)
T cd00840 59 PEALELLIEALRRLKEAGIPVFIIAGNHDSPSRLGALSPLLALSGLHLVGVEEDVLTPLLLPKGGTGVAIYGLPYLRRSR 138 (223)
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEecCCCCCccccccccchHhhCcEEEEcccCcceeEEEeccCCeEEEEEECCCCCHHH
Confidence 123455666666553 479999999999987 00 0 00 0 1
Q ss_pred ChHHHHHHHHHHhcccCCCCCEEEEEecCCcccCCCCCCCc-hHHHHHHhhhcCceEEEeccccceeee
Q 048036 272 TGDQYKWLEEDLVNVDREVTPWLVVTWHAPWYNTYKAHYRE-AECMRVVAMEDGVDVVFNGHVHAYERS 339 (472)
Q Consensus 272 ~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~y~~~~~~~~~-~~~~r~~~le~~VdlvlsGH~H~Y~R~ 339 (472)
...+.++++..+.... .....|++.|.|+.......... ...+.. +...++|++++||.|..+..
T Consensus 139 ~~~~~~~~~~~~~~~~--~~~~~Il~~H~~~~~~~~~~~~~~~~~~~~-~~~~~~d~v~~GH~H~~~~~ 204 (223)
T cd00840 139 LRDLLADAELRPRPLD--PDDFNILLLHGGVAGAGPSDSERAPFVPEA-LLPAGFDYVALGHIHRPQII 204 (223)
T ss_pred HHHHHHHHHHHhhccC--CCCcEEEEEeeeeecCCCCcccccccCcHh-hcCcCCCEEECCCcccCeee
Confidence 1233344444444432 33468999999986543221110 011222 22339999999999986543
No 27
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=99.26 E-value=5.3e-11 Score=114.53 Aligned_cols=136 Identities=14% Similarity=0.180 Sum_probs=87.0
Q ss_pred CeEEEEEeecCCCCChHH-HHHHHHhCCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHhhhh
Q 048036 169 PSKIAIVGDQGLTYNTTS-TVNHMISNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDYWGRYMQP 247 (472)
Q Consensus 169 ~~~f~v~gD~~~~~~~~~-~l~~l~~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~~~~~i~~ 247 (472)
+.|+++++|+|.+....+ .++.+.+.++|+||++||+++. |.. ......+++.+..
T Consensus 4 ~~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~------g~~-----------------~~~~~~~l~~l~~ 60 (224)
T cd07388 4 VRYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPK------AAK-----------------SEDYAAFFRILGE 60 (224)
T ss_pred eeEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCC------CCC-----------------HHHHHHHHHHHHh
Confidence 569999999997543322 3343445689999999999952 110 0122233333332
Q ss_pred hhcCCCeEEeccccccc--------ce--------e--------------ecc----------CChHHH----HHHHH--
Q 048036 248 VLSKVPIMVVEGNHELD--------FD--------I--------------YIY----------ITGDQY----KWLEE-- 281 (472)
Q Consensus 248 l~~~~P~~~v~GNHD~~--------F~--------~--------------yid----------~~~~Q~----~WL~~-- 281 (472)
..+|+++++||||.. |+ . |+. ..++|. +||.+
T Consensus 61 --l~~pv~~V~GNhD~~v~~~l~~~~~~~~~~p~~~~lh~~~~~~~g~~~~~GlGGs~~~~~e~sE~e~~~~~~~~~~~~ 138 (224)
T cd07388 61 --AHLPTFYVPGPQDAPLWEYLREAYNAELVHPEIRNVHETFAFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYR 138 (224)
T ss_pred --cCCceEEEcCCCChHHHHHHHHHhcccccCccceecCCCeEEecCCeEEEEecCCcCCCCCcCHHHHhhhhhhHHHHH
Confidence 247999999999973 32 1 110 344442 56544
Q ss_pred --HHhcccCCCCCEEEEEecCCcccCCCCCCCchHHHHHHhhhc-CceEEEecccc
Q 048036 282 --DLVNVDREVTPWLVVTWHAPWYNTYKAHYREAECMRVVAMED-GVDVVFNGHVH 334 (472)
Q Consensus 282 --~L~~~~r~~~pw~Iv~~H~P~y~~~~~~~~~~~~~r~~~le~-~VdlvlsGH~H 334 (472)
.|.+. ..+..|+++|+|+|.....| ..+..+|. ++++ +..+++|||+|
T Consensus 139 l~~~~~~---~~~~~VLv~H~PP~g~g~~h-~GS~alr~-~I~~~~P~l~i~GHih 189 (224)
T cd07388 139 LKALWEL---KDYRKVFLFHTPPYHKGLNE-QGSHEVAH-LIKTHNPLVVLVGGKG 189 (224)
T ss_pred HHHHHhC---CCCCeEEEECCCCCCCCCCc-cCHHHHHH-HHHHhCCCEEEEcCCc
Confidence 33332 22358999999999874333 34567888 8888 99999999999
No 28
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=99.26 E-value=7.5e-11 Score=116.76 Aligned_cols=142 Identities=26% Similarity=0.411 Sum_probs=91.5
Q ss_pred eEEEEEeecCCC--CC-hH----HHHHHHHhCCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHHHH
Q 048036 170 SKIAIVGDQGLT--YN-TT----STVNHMISNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDYWG 242 (472)
Q Consensus 170 ~~f~v~gD~~~~--~~-~~----~~l~~l~~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~~~ 242 (472)
++|+.++|.|.. .. .. ++++++...+||++|++||+++. |. ........
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~------~~------------------~~~~~~~~ 56 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTND------GE------------------PEEYRRLK 56 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCC------CC------------------HHHHHHHH
Confidence 489999999988 22 22 33455566789999999999962 22 12233444
Q ss_pred HhhhhhhcCCCeEEeccccccc------ce-----e--------------ec--c----------CChHHHHHHHHHHhc
Q 048036 243 RYMQPVLSKVPIMVVEGNHELD------FD-----I--------------YI--Y----------ITGDQYKWLEEDLVN 285 (472)
Q Consensus 243 ~~i~~l~~~~P~~~v~GNHD~~------F~-----~--------------yi--d----------~~~~Q~~WL~~~L~~ 285 (472)
+.++......|++++|||||.. |. . .+ + ....|++||++.|++
T Consensus 57 ~~l~~~~~~~~~~~vpGNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~G~~~~~q~~~l~~~l~~ 136 (301)
T COG1409 57 ELLARLELPAPVIVVPGNHDARVVNGEAFSDQFFNRYAVLVGACSSGGWRVIGLDSSVPGVPLGRLGAEQLDWLEEALAA 136 (301)
T ss_pred HHHhhccCCCceEeeCCCCcCCchHHHHhhhhhcccCcceEeeccCCceEEEEecCCCCCCCCCEECHHHHHHHHHHHHh
Confidence 4555445578899999999987 10 0 00 1 778999999999998
Q ss_pred ccCCCCCEEEEEecCCcccCCCCCC----CchHHHHHHhhhc-C--ceEEEeccccce
Q 048036 286 VDREVTPWLVVTWHAPWYNTYKAHY----REAECMRVVAMED-G--VDVVFNGHVHAY 336 (472)
Q Consensus 286 ~~r~~~pw~Iv~~H~P~y~~~~~~~----~~~~~~r~~~le~-~--VdlvlsGH~H~Y 336 (472)
........+|+++|+|+........ ........ .+.. + |+++|+||.|.-
T Consensus 137 ~~~~~~~~~v~~~hh~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~v~~vl~GH~H~~ 193 (301)
T COG1409 137 APERAKDTVVVLHHHPLPSPGTGVDRVALRDAGELLD-VLIAHGNDVRLVLSGHIHLA 193 (301)
T ss_pred CccccCceEEEecCCCCCCCCCccceeeeecchhHHH-HHHhcCCceEEEEeCccccc
Confidence 6432112467778887765432211 11122222 2333 4 999999999986
No 29
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=99.24 E-value=4.9e-10 Score=110.95 Aligned_cols=73 Identities=29% Similarity=0.428 Sum_probs=51.9
Q ss_pred CeEEEEEeecCCCCC--------------------hHHHHHHHH-hCCCCEEEEcCCcccccccccCCCCCCccccCCCC
Q 048036 169 PSKIAIVGDQGLTYN--------------------TTSTVNHMI-SNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFAN 227 (472)
Q Consensus 169 ~~~f~v~gD~~~~~~--------------------~~~~l~~l~-~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~ 227 (472)
+||++.++|+|.+.. ....++++. .++||||+++||+++....
T Consensus 53 ~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g~~t---------------- 116 (379)
T KOG1432|consen 53 TFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFGHST---------------- 116 (379)
T ss_pred ceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCccccccc----------------
Confidence 789999999997632 122345544 4799999999999964211
Q ss_pred CCCcccchHHHHHHHHhhhhh-hcCCCeEEeccccccc
Q 048036 228 SPIHETYQPRWDYWGRYMQPV-LSKVPIMVVEGNHELD 264 (472)
Q Consensus 228 ~~~~e~y~~~wd~~~~~i~~l-~~~~P~~~v~GNHD~~ 264 (472)
+..-..+++.++|. ..++||.++.||||-.
T Consensus 117 -------~Da~~sl~kAvaP~I~~~IPwA~~lGNHDde 147 (379)
T KOG1432|consen 117 -------QDAATSLMKAVAPAIDRKIPWAAVLGNHDDE 147 (379)
T ss_pred -------HhHHHHHHHHhhhHhhcCCCeEEEecccccc
Confidence 11123456677764 6789999999999987
No 30
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=99.23 E-value=6.3e-11 Score=117.55 Aligned_cols=72 Identities=25% Similarity=0.406 Sum_probs=51.3
Q ss_pred CeEEEEEeecCCCCC-----hHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHHHHH
Q 048036 169 PSKIAIVGDQGLTYN-----TTSTVNHMISNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDYWGR 243 (472)
Q Consensus 169 ~~~f~v~gD~~~~~~-----~~~~l~~l~~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~~~~ 243 (472)
++||++++|+|.+.. ..+.++.+.+.+||+|+++||+++.+. . ..++.+.+
T Consensus 49 ~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~----~--------------------~~~~~~~~ 104 (271)
T PRK11340 49 PFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDM----P--------------------LNFSAFSD 104 (271)
T ss_pred CcEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCc----c--------------------ccHHHHHH
Confidence 699999999998632 123455566679999999999984110 0 12345556
Q ss_pred hhhhhhcCCCeEEeccccccc
Q 048036 244 YMQPVLSKVPIMVVEGNHELD 264 (472)
Q Consensus 244 ~i~~l~~~~P~~~v~GNHD~~ 264 (472)
.++.+.+..|+++++||||+.
T Consensus 105 ~L~~L~~~~pv~~V~GNHD~~ 125 (271)
T PRK11340 105 VLSPLAECAPTFACFGNHDRP 125 (271)
T ss_pred HHHHHhhcCCEEEecCCCCcc
Confidence 666666668999999999974
No 31
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=99.13 E-value=3.4e-10 Score=97.11 Aligned_cols=111 Identities=29% Similarity=0.521 Sum_probs=72.5
Q ss_pred EEEeecCCCCChHHHH---HHHHhCCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHhhhhhh
Q 048036 173 AIVGDQGLTYNTTSTV---NHMISNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDYWGRYMQPVL 249 (472)
Q Consensus 173 ~v~gD~~~~~~~~~~l---~~l~~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~~~~~i~~l~ 249 (472)
+++||+|......... ....+.++|++|++||+++. +.. ..+..+........
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~------~~~------------------~~~~~~~~~~~~~~ 56 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGD------GPD------------------PEEVLAAALALLLL 56 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCC------CCC------------------chHHHHHHHHHhhc
Confidence 4689999875543332 33455799999999999963 111 11222222233345
Q ss_pred cCCCeEEecccccccceeeccCChHHHHHHHHHHhcccCCCCCEEEEEecCCcccCCCCCCCc----hHHHHHHhhhc-C
Q 048036 250 SKVPIMVVEGNHELDFDIYIYITGDQYKWLEEDLVNVDREVTPWLVVTWHAPWYNTYKAHYRE----AECMRVVAMED-G 324 (472)
Q Consensus 250 ~~~P~~~v~GNHD~~F~~yid~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~y~~~~~~~~~----~~~~r~~~le~-~ 324 (472)
...|+++++|||| |+++|.|++......... ...+.. .+.. +
T Consensus 57 ~~~~~~~~~GNHD--------------------------------i~~~H~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 103 (131)
T cd00838 57 LGIPVYVVPGNHD--------------------------------ILLTHGPPYDPLDELSPDEDPGSEALLE-LLEKYG 103 (131)
T ss_pred CCCCEEEeCCCce--------------------------------EEEeccCCCCCchhhcccchhhHHHHHH-HHHHhC
Confidence 6899999999994 999999998764322111 112222 3333 9
Q ss_pred ceEEEeccccceeeee
Q 048036 325 VDVVFNGHVHAYERSN 340 (472)
Q Consensus 325 VdlvlsGH~H~Y~R~~ 340 (472)
++++|+||.|.+.+..
T Consensus 104 ~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 104 VDLVLSGHTHVYERRE 119 (131)
T ss_pred CCEEEeCCeecccccc
Confidence 9999999999998875
No 32
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=99.10 E-value=1.4e-09 Score=105.14 Aligned_cols=63 Identities=30% Similarity=0.447 Sum_probs=43.9
Q ss_pred eEEEEEeecCCCCChHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHhhhhhh
Q 048036 170 SKIAIVGDQGLTYNTTSTVNHMISNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDYWGRYMQPVL 249 (472)
Q Consensus 170 ~~f~v~gD~~~~~~~~~~l~~l~~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~~~~~i~~l~ 249 (472)
+||+++||.|..... ..++.+.+.+||+||++||++.. . ..+.+.+..+
T Consensus 1 ~rIa~isDiHg~~~~-~~~~~l~~~~pD~Vl~~GDi~~~-------~----------------------~~~~~~l~~l- 49 (238)
T cd07397 1 LRIAIVGDVHGQWDL-EDIKALHLLQPDLVLFVGDFGNE-------S----------------------VQLVRAISSL- 49 (238)
T ss_pred CEEEEEecCCCCchH-HHHHHHhccCCCEEEECCCCCcC-------h----------------------HHHHHHHHhC-
Confidence 589999999976433 23445666789999999999831 0 1223333332
Q ss_pred cCCCeEEeccccccc
Q 048036 250 SKVPIMVVEGNHELD 264 (472)
Q Consensus 250 ~~~P~~~v~GNHD~~ 264 (472)
..|+++++||||..
T Consensus 50 -~~p~~~V~GNHD~~ 63 (238)
T cd07397 50 -PLPKAVILGNHDAW 63 (238)
T ss_pred -CCCeEEEcCCCccc
Confidence 47899999999975
No 33
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=99.09 E-value=7.8e-10 Score=97.97 Aligned_cols=112 Identities=19% Similarity=0.261 Sum_probs=70.7
Q ss_pred EEEEEeecCCCCChHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHhhhhhhc
Q 048036 171 KIAIVGDQGLTYNTTSTVNHMISNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDYWGRYMQPVLS 250 (472)
Q Consensus 171 ~f~v~gD~~~~~~~~~~l~~l~~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~~~~~i~~l~~ 250 (472)
||+++||+|.... .+...++|++|++||++.. +. ...++.+.+.++.+.
T Consensus 1 ~i~~isD~H~~~~------~~~~~~~D~vi~~GD~~~~------~~------------------~~~~~~~~~~l~~~~- 49 (135)
T cd07379 1 RFVCISDTHSRHR------TISIPDGDVLIHAGDLTER------GT------------------LEELQKFLDWLKSLP- 49 (135)
T ss_pred CEEEEeCCCCCCC------cCcCCCCCEEEECCCCCCC------CC------------------HHHHHHHHHHHHhCC-
Confidence 5899999997644 2334689999999999842 11 012334444444332
Q ss_pred CCCeEEecccccccceeeccCChHHHHHHHHHHhcccCCCCCEEEEEecCCcccCCCCCC----CchHHHHHHhhhc-Cc
Q 048036 251 KVPIMVVEGNHELDFDIYIYITGDQYKWLEEDLVNVDREVTPWLVVTWHAPWYNTYKAHY----REAECMRVVAMED-GV 325 (472)
Q Consensus 251 ~~P~~~v~GNHD~~F~~yid~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~y~~~~~~~----~~~~~~r~~~le~-~V 325 (472)
..++++++||||..+ . . . .+.|++.|.|++....... ...+.++. .+++ ++
T Consensus 50 ~~~~~~v~GNHD~~~--------~-----------~--~--~~~ilv~H~~p~~~~~~~~~~~~~g~~~~~~-~~~~~~~ 105 (135)
T cd07379 50 HPHKIVIAGNHDLTL--------D-----------P--E--DTDILVTHGPPYGHLDLVSSGQRVGCEELLN-RVQRVRP 105 (135)
T ss_pred CCeEEEEECCCCCcC--------C-----------C--C--CCEEEEECCCCCcCccccccCcccCCHHHHH-HHHHHCC
Confidence 123578999999521 0 1 1 2378899999987532211 12234555 5666 89
Q ss_pred eEEEecccccee
Q 048036 326 DVVFNGHVHAYE 337 (472)
Q Consensus 326 dlvlsGH~H~Y~ 337 (472)
+++|+||+|...
T Consensus 106 ~~~i~GH~H~~~ 117 (135)
T cd07379 106 KLHVFGHIHEGY 117 (135)
T ss_pred cEEEEcCcCCcC
Confidence 999999999853
No 34
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.09 E-value=1.4e-10 Score=104.13 Aligned_cols=137 Identities=22% Similarity=0.379 Sum_probs=78.8
Q ss_pred eEEEEEeecCCCCCh-HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHhhhhh
Q 048036 170 SKIAIVGDQGLTYNT-TSTVNHMISNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDYWGRYMQPV 248 (472)
Q Consensus 170 ~~f~v~gD~~~~~~~-~~~l~~l~~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~~~~~i~~l 248 (472)
+||+++||+|..... .+.++.+ .++|+||++||++.. .++.+.++.+
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~------------------------------~~~~~~~~~~ 48 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP------------------------------EEVLELLRDI 48 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH------------------------------HHHHHHHHHH
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH------------------------------HHHHHHHhcC
Confidence 589999999986432 2344544 579999999999831 2344444433
Q ss_pred hcCCCeEEecccccccceeeccCChHHHHHHHHHHhcc-cCCCCCEEEEEecCCcccCCCCCCCchHHHHHHhhhc-Cce
Q 048036 249 LSKVPIMVVEGNHELDFDIYIYITGDQYKWLEEDLVNV-DREVTPWLVVTWHAPWYNTYKAHYREAECMRVVAMED-GVD 326 (472)
Q Consensus 249 ~~~~P~~~v~GNHD~~F~~yid~~~~Q~~WL~~~L~~~-~r~~~pw~Iv~~H~P~y~~~~~~~~~~~~~r~~~le~-~Vd 326 (472)
|++++.||||... |.+....+. +... ...-..+.|+++|...+... ...+.++. .+.. +++
T Consensus 49 ----~~~~v~GNHD~~~--~~~~~~~~~------~~~~~~~~~~~~~i~~~H~~~~~~~----~~~~~~~~-~~~~~~~~ 111 (156)
T PF12850_consen 49 ----PVYVVRGNHDNWA--FPNENDEEY------LLDALRLTIDGFKILLSHGHPYDVQ----WDPAELRE-ILSRENVD 111 (156)
T ss_dssp ----EEEEE--CCHSTH--HHSEECTCS------SHSEEEEEETTEEEEEESSTSSSST----TTHHHHHH-HHHHTTSS
T ss_pred ----CEEEEeCCccccc--chhhhhccc------cccceeeeecCCeEEEECCCCcccc----cChhhhhh-hhcccCCC
Confidence 8999999999531 000000000 1111 11112468999998877643 12233444 3434 999
Q ss_pred EEEeccccceeeeeecccCccCCCCCEEEEeCCCCCC
Q 048036 327 VVFNGHVHAYERSNRVYNYTLDPCGPIHITVGDGGNR 363 (472)
Q Consensus 327 lvlsGH~H~Y~R~~p~~~~~~~~~g~vyiv~G~gG~~ 363 (472)
++|+||.|..+... .+++.++..|+-+..
T Consensus 112 ~~~~GH~H~~~~~~--------~~~~~~~~~Gs~~~~ 140 (156)
T PF12850_consen 112 LVLHGHTHRPQVFK--------IGGIHVINPGSIGGP 140 (156)
T ss_dssp EEEESSSSSEEEEE--------ETTEEEEEE-GSSS-
T ss_pred EEEcCCcccceEEE--------ECCEEEEECCcCCCC
Confidence 99999999977654 257788888877654
No 35
>TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202.
Probab=99.04 E-value=2.3e-09 Score=112.10 Aligned_cols=65 Identities=17% Similarity=0.269 Sum_probs=46.6
Q ss_pred CChHHHHHHHHHHhcccCCCCCEEEEEecCCcccCCCCC---------CCchHHHHHHhhhc--CceEEEeccccceeee
Q 048036 271 ITGDQYKWLEEDLVNVDREVTPWLVVTWHAPWYNTYKAH---------YREAECMRVVAMED--GVDVVFNGHVHAYERS 339 (472)
Q Consensus 271 ~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~y~~~~~~---------~~~~~~~r~~~le~--~VdlvlsGH~H~Y~R~ 339 (472)
+.++|++||+++|++. ..+++||++|||++...... ..+.+.+.. +|.+ +|.++|+||.|.....
T Consensus 320 L~eeQL~WLeqeLa~a---~~k~VVVf~HHPp~s~g~~~~Dp~~pg~~~~n~~eLld-LL~~ypnV~aVfsGHvH~n~i~ 395 (496)
T TIGR03767 320 LGQTQFKWIKDTLRAS---SDTLFVLFSHHTSWSMVNELTDPVDPGEKRHLGTELVS-LLLEHPNVLAWVNGHTHSNKIT 395 (496)
T ss_pred cCHHHHHHHHHHHhcC---CCCCEEEEECCCCccccccccccccccccccCHHHHHH-HHhcCCCceEEEECCcCCCccc
Confidence 5689999999999974 33579999999988643211 012234444 5666 8999999999986544
No 36
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=98.91 E-value=6.2e-09 Score=94.07 Aligned_cols=130 Identities=23% Similarity=0.290 Sum_probs=76.2
Q ss_pred EEEEEeecCCCCCh-HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHhhhhhh
Q 048036 171 KIAIVGDQGLTYNT-TSTVNHMISNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDYWGRYMQPVL 249 (472)
Q Consensus 171 ~f~v~gD~~~~~~~-~~~l~~l~~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~~~~~i~~l~ 249 (472)
|++++||+|..... .+.++.+. ++|+++++||++.. +.. .. +.
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~--~~d~ii~~GD~~~~------~~~---------------------~~-------~~ 44 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFG--DVDLIIHAGDVLYP------GPL---------------------NE-------LE 44 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhc--CCCEEEECCccccc------ccc---------------------ch-------hh
Confidence 58899999976422 12222222 39999999999852 110 00 23
Q ss_pred cCCCeEEecccccccceeeccCChHHHHHHHHHHhcc-cCCCCCEEEEEecCCcccCCCCCCCchHHHHHHhhhc-CceE
Q 048036 250 SKVPIMVVEGNHELDFDIYIYITGDQYKWLEEDLVNV-DREVTPWLVVTWHAPWYNTYKAHYREAECMRVVAMED-GVDV 327 (472)
Q Consensus 250 ~~~P~~~v~GNHD~~F~~yid~~~~Q~~WL~~~L~~~-~r~~~pw~Iv~~H~P~y~~~~~~~~~~~~~r~~~le~-~Vdl 327 (472)
...|++.+.||||..- . + ..|... .-.-..++|++.|.+.+..... ... +. .++. ++|+
T Consensus 45 ~~~~~~~V~GNhD~~~--------~----~-~~~p~~~~~~~~g~~i~v~Hg~~~~~~~~----~~~-~~-~~~~~~~d~ 105 (155)
T cd00841 45 LKAPVIAVRGNCDGEV--------D----F-PILPEEAVLEIGGKRIFLTHGHLYGVKNG----LDR-LY-LAKEGGADV 105 (155)
T ss_pred cCCcEEEEeCCCCCcC--------C----c-ccCCceEEEEECCEEEEEECCcccccccc----hhh-hh-hhhhcCCCE
Confidence 4578999999999520 0 0 011100 0011135799999987654321 111 22 3444 8999
Q ss_pred EEeccccceeeeeecccCccCCCCCEEEEeCCCCCC
Q 048036 328 VFNGHVHAYERSNRVYNYTLDPCGPIHITVGDGGNR 363 (472)
Q Consensus 328 vlsGH~H~Y~R~~p~~~~~~~~~g~vyiv~G~gG~~ 363 (472)
+++||+|...... .++++++..|+.|.+
T Consensus 106 vi~GHtH~~~~~~--------~~~~~~inpGs~~~~ 133 (155)
T cd00841 106 VLYGHTHIPVIEK--------IGGVLLLNPGSLSLP 133 (155)
T ss_pred EEECcccCCccEE--------ECCEEEEeCCCccCc
Confidence 9999999854331 246788877877653
No 37
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=98.90 E-value=1.9e-08 Score=91.52 Aligned_cols=133 Identities=20% Similarity=0.244 Sum_probs=77.7
Q ss_pred eEEEEEeecCCCCChHHH-HHHHHhC-CCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHhhhh
Q 048036 170 SKIAIVGDQGLTYNTTST-VNHMISN-RPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDYWGRYMQP 247 (472)
Q Consensus 170 ~~f~v~gD~~~~~~~~~~-l~~l~~~-~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~~~~~i~~ 247 (472)
+|+++++|+|......+. ++.+... ++|.|+++||++-. ...+.++.
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~-------------------------------~~~~~l~~ 49 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLTSP-------------------------------FVLKEFED 49 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCCCH-------------------------------HHHHHHHH
Confidence 489999999976544333 3334445 89999999999720 11222222
Q ss_pred hhcCCCeEEecccccccceeeccCChHHHHHHHHHHhcccCCCCCEEEEEecCCcccCCCCCCCchHHHHHHhhhc-Cce
Q 048036 248 VLSKVPIMVVEGNHELDFDIYIYITGDQYKWLEEDLVNVDREVTPWLVVTWHAPWYNTYKAHYREAECMRVVAMED-GVD 326 (472)
Q Consensus 248 l~~~~P~~~v~GNHD~~F~~yid~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~y~~~~~~~~~~~~~r~~~le~-~Vd 326 (472)
+ ..|++.+.||||.. -..|.+...-. -..++|.+.|-..+... ...+.+.. .... ++|
T Consensus 50 ~--~~~~~~V~GN~D~~----------~~~~~~~~~~~----~~g~~i~l~Hg~~~~~~----~~~~~l~~-~~~~~~~d 108 (158)
T TIGR00040 50 L--AAKVIAVRGNNDGE----------RDELPEEEIFE----AEGIDFGLVHGDLVYPR----GDLLVLEY-LAKELGVD 108 (158)
T ss_pred h--CCceEEEccCCCch----------hhhCCcceEEE----ECCEEEEEEeCcccccC----CCHHHHHH-HHhccCCC
Confidence 2 35899999999951 11122111111 12367899997643321 11223333 2233 899
Q ss_pred EEEeccccceeeeeecccCccCCCCCEEEEeCCCCC
Q 048036 327 VVFNGHVHAYERSNRVYNYTLDPCGPIHITVGDGGN 362 (472)
Q Consensus 327 lvlsGH~H~Y~R~~p~~~~~~~~~g~vyiv~G~gG~ 362 (472)
++++||+|.-.... -++++++..|+.+.
T Consensus 109 ~vi~GHtH~~~~~~--------~~~~~~iNpGs~~~ 136 (158)
T TIGR00040 109 VLIFGHTHIPVAEE--------LRGILLINPGSLTG 136 (158)
T ss_pred EEEECCCCCCccEE--------ECCEEEEECCcccc
Confidence 99999999742211 14677777777664
No 38
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=98.90 E-value=2.2e-08 Score=99.85 Aligned_cols=72 Identities=21% Similarity=0.275 Sum_probs=55.0
Q ss_pred CeEEEEEeecCCCCCh---HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHhh
Q 048036 169 PSKIAIVGDQGLTYNT---TSTVNHMISNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDYWGRYM 245 (472)
Q Consensus 169 ~~~f~v~gD~~~~~~~---~~~l~~l~~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~~~~~i 245 (472)
+++++.++|+|..... .+.+.++.+..+|+|+++||++..+. . ..+..+.+.+
T Consensus 44 ~~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~-----~-------------------~~~~~~~~~L 99 (284)
T COG1408 44 GLKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDR-----P-------------------PGVAALALFL 99 (284)
T ss_pred CeEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCC-----C-------------------CCHHHHHHHH
Confidence 6899999999987554 23445556678899999999995200 0 1345667777
Q ss_pred hhhhcCCCeEEeccccccc
Q 048036 246 QPVLSKVPIMVVEGNHELD 264 (472)
Q Consensus 246 ~~l~~~~P~~~v~GNHD~~ 264 (472)
+++.+..+++++.||||+.
T Consensus 100 ~~L~~~~gv~av~GNHd~~ 118 (284)
T COG1408 100 AKLKAPLGVFAVLGNHDYG 118 (284)
T ss_pred HhhhccCCEEEEecccccc
Confidence 8888899999999999987
No 39
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=98.84 E-value=2e-08 Score=91.55 Aligned_cols=99 Identities=24% Similarity=0.499 Sum_probs=58.3
Q ss_pred HhCCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHhhhhhh---cCCCeEEecccccccceee
Q 048036 192 ISNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDYWGRYMQPVL---SKVPIMVVEGNHELDFDIY 268 (472)
Q Consensus 192 ~~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~~~~~i~~l~---~~~P~~~v~GNHD~~F~~y 268 (472)
.+.+||+|+++||++.. +... . ...|..+...+..+. ..+|++.++||||..+..
T Consensus 35 ~~~~pd~vv~~GDl~~~------~~~~--------------~-~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~~~~- 92 (156)
T cd08165 35 WLLQPDVVFVLGDLFDE------GKWS--------------T-DEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIGFHY- 92 (156)
T ss_pred HhcCCCEEEECCCCCCC------CccC--------------C-HHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcCCCC-
Confidence 34699999999999952 1100 0 134555444333332 258999999999974211
Q ss_pred ccCChHHHHHHHHHHhcccCCCCCEEEEEecCCcccCCCCCCCchHHHHHHhhhc-CceEEEeccccceeee
Q 048036 269 IYITGDQYKWLEEDLVNVDREVTPWLVVTWHAPWYNTYKAHYREAECMRVVAMED-GVDVVFNGHVHAYERS 339 (472)
Q Consensus 269 id~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~y~~~~~~~~~~~~~r~~~le~-~VdlvlsGH~H~Y~R~ 339 (472)
.....-.+.+++. .|++.|.|.+. .+.+ +++++|+||.|-.-+.
T Consensus 93 -~~~~~~~~~~~~~-----------~~~l~H~p~~~---------------~~~~~~~~~~l~GH~H~~~~~ 137 (156)
T cd08165 93 -EMTTYKLERFEKV-----------FILLQHFPLYR---------------LLQWLKPRLVLSGHTHSFCEV 137 (156)
T ss_pred -ccCHHHHHHHHHH-----------eeeeeCChHHH---------------HHHhhCCCEEEEcccCCCcee
Confidence 0111111122221 28999999742 1222 5679999999985554
No 40
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=98.83 E-value=5.7e-08 Score=91.96 Aligned_cols=142 Identities=23% Similarity=0.305 Sum_probs=87.7
Q ss_pred CeEEEEEeecCCCCCh-HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHhhhh
Q 048036 169 PSKIAIVGDQGLTYNT-TSTVNHMISNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDYWGRYMQP 247 (472)
Q Consensus 169 ~~~f~v~gD~~~~~~~-~~~l~~l~~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~~~~~i~~ 247 (472)
.+|++++.|.|..... .+.++.+...++|+++.+||++|.+ .|.. ..-.+-. .++.
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~----~~~~------------------~~~~~~~-~~e~ 59 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFH----FGPK------------------EVAEELN-KLEA 59 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhh----cCch------------------HHHHhhh-HHHH
Confidence 5799999999987543 3344444556999999999999532 1211 0001100 0333
Q ss_pred h-hcCCCeEEecccccccc--e---------------e----e-----cc---------CCh-HHHHHHHHHHhcccCCC
Q 048036 248 V-LSKVPIMVVEGNHELDF--D---------------I----Y-----IY---------ITG-DQYKWLEEDLVNVDREV 290 (472)
Q Consensus 248 l-~~~~P~~~v~GNHD~~F--~---------------~----y-----id---------~~~-~Q~~WL~~~L~~~~r~~ 290 (472)
+ ...+|+++++||-|-.. + . | .+ ..+ +-+.-|+.-+.+.+..
T Consensus 60 l~~~~~~v~avpGNcD~~~v~~~l~~~~~~v~~~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~~~- 138 (226)
T COG2129 60 LKELGIPVLAVPGNCDPPEVIDVLKNAGVNVHGRVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKADNP- 138 (226)
T ss_pred HHhcCCeEEEEcCCCChHHHHHHHHhcccccccceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhcccCc-
Confidence 3 35799999999999760 0 0 1 11 222 2333444444444211
Q ss_pred CCEEEEEecCCcccCCCCCC-----CchHHHHHHhhhc-CceEEEecccccee
Q 048036 291 TPWLVVTWHAPWYNTYKAHY-----REAECMRVVAMED-GVDVVFNGHVHAYE 337 (472)
Q Consensus 291 ~pw~Iv~~H~P~y~~~~~~~-----~~~~~~r~~~le~-~VdlvlsGH~H~Y~ 337 (472)
-.|+.+|.|+|....+.. -....+|. ++|+ ++-+.++||+|-+.
T Consensus 139 --~~Il~~HaPP~gt~~d~~~g~~hvGS~~vr~-~ieefqP~l~i~GHIHEs~ 188 (226)
T COG2129 139 --VNILLTHAPPYGTLLDTPSGYVHVGSKAVRK-LIEEFQPLLGLHGHIHESR 188 (226)
T ss_pred --ceEEEecCCCCCccccCCCCccccchHHHHH-HHHHhCCceEEEeeecccc
Confidence 139999999998643321 12356788 7888 99999999999843
No 41
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.80 E-value=1.5e-07 Score=87.58 Aligned_cols=131 Identities=15% Similarity=0.340 Sum_probs=76.1
Q ss_pred EEEEEeecCCCCCh---HHHHHHHHh-CCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHhhh
Q 048036 171 KIAIVGDQGLTYNT---TSTVNHMIS-NRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDYWGRYMQ 246 (472)
Q Consensus 171 ~f~v~gD~~~~~~~---~~~l~~l~~-~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~~~~~i~ 246 (472)
+++++||+|..... .+.+.++.+ .++|.+||+||++.. ..++ .++
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~~~~d~iih~GDi~~~---------------------------~~~~----~l~ 49 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVPGKIQHVLCTGNLCSK---------------------------ETYD----YLK 49 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhccCCCCEEEECCCCCCH---------------------------HHHH----HHH
Confidence 47899999955332 223334443 579999999999841 1222 222
Q ss_pred hhhcCCCeEEecccccccceeeccCChHHHHHHHHHHhcc-cCCCCCEEEEEecCCcccCCCCCCCchHHHHHHhhhc-C
Q 048036 247 PVLSKVPIMVVEGNHELDFDIYIYITGDQYKWLEEDLVNV-DREVTPWLVVTWHAPWYNTYKAHYREAECMRVVAMED-G 324 (472)
Q Consensus 247 ~l~~~~P~~~v~GNHD~~F~~yid~~~~Q~~WL~~~L~~~-~r~~~pw~Iv~~H~P~y~~~~~~~~~~~~~r~~~le~-~ 324 (472)
.+ ..|++.|.||||.. | .|-.. .-.-.-++|.+.|--.+... ...+.+.. ..+. +
T Consensus 50 ~~--~~~~~~V~GN~D~~-------------~---~lp~~~~~~~~g~~i~l~HG~~~~~~----~~~~~~~~-~~~~~~ 106 (178)
T cd07394 50 TI--APDVHIVRGDFDEN-------------L---NYPETKVITVGQFKIGLIHGHQVVPW----GDPDSLAA-LQRQLD 106 (178)
T ss_pred hh--CCceEEEECCCCcc-------------c---cCCCcEEEEECCEEEEEEECCcCCCC----CCHHHHHH-HHHhcC
Confidence 22 24789999999951 0 11110 00112357888885333211 11223433 3344 8
Q ss_pred ceEEEeccccceeeeeecccCccCCCCCEEEEeCCCCCC
Q 048036 325 VDVVFNGHVHAYERSNRVYNYTLDPCGPIHITVGDGGNR 363 (472)
Q Consensus 325 VdlvlsGH~H~Y~R~~p~~~~~~~~~g~vyiv~G~gG~~ 363 (472)
+|++++||+|.-.... .+|.+++.-|+.|.+
T Consensus 107 ~dvii~GHTH~p~~~~--------~~g~~viNPGSv~~~ 137 (178)
T cd07394 107 VDILISGHTHKFEAFE--------HEGKFFINPGSATGA 137 (178)
T ss_pred CCEEEECCCCcceEEE--------ECCEEEEECCCCCCC
Confidence 9999999999754332 246788888887653
No 42
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.76 E-value=3.4e-08 Score=87.06 Aligned_cols=100 Identities=22% Similarity=0.269 Sum_probs=62.7
Q ss_pred EEEeecCCCCChHHHHHHHH--hCCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHhhhhhhc
Q 048036 173 AIVGDQGLTYNTTSTVNHMI--SNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDYWGRYMQPVLS 250 (472)
Q Consensus 173 ~v~gD~~~~~~~~~~l~~l~--~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~~~~~i~~l~~ 250 (472)
+++||+|.. ...+.++. +.++|+++++||+.. ..++.+ +.+ .
T Consensus 1 ~viSDtH~~---~~~~~~~~~~~~~~d~ii~~GD~~~----------------------------~~~~~~----~~~-~ 44 (129)
T cd07403 1 LVISDTESP---ALYSPEIKVRLEGVDLILSAGDLPK----------------------------EYLEYL----VTM-L 44 (129)
T ss_pred CeeccccCc---cccchHHHhhCCCCCEEEECCCCCh----------------------------HHHHHH----HHH-c
Confidence 478999944 22333333 468999999999852 111222 222 3
Q ss_pred CCCeEEecccccccceeeccCChHHHHHHHHHHhcccCCCCCEEEEEecCCcccCCCCC---CCchHHHHHHhhhc-Cce
Q 048036 251 KVPIMVVEGNHELDFDIYIYITGDQYKWLEEDLVNVDREVTPWLVVTWHAPWYNTYKAH---YREAECMRVVAMED-GVD 326 (472)
Q Consensus 251 ~~P~~~v~GNHD~~F~~yid~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~y~~~~~~---~~~~~~~r~~~le~-~Vd 326 (472)
..|++.+.|||| .+|+++|+|++...... ....+.+.. .+.+ +++
T Consensus 45 ~~~~~~V~GN~D------------------------------~~Ilv~H~pp~~~~~~~~~~~~g~~~l~~-~l~~~~~~ 93 (129)
T cd07403 45 NVPVYYVHGNHD------------------------------VDILLTHAPPAGIGDGEDFAHRGFEAFLD-FIDRFRPK 93 (129)
T ss_pred CCCEEEEeCCCc------------------------------cCEEEECCCCCcCcCcccccccCHHHHHH-HHHHHCCc
Confidence 568999999994 25888999887543210 012333444 4555 899
Q ss_pred EEEeccccceeee
Q 048036 327 VVFNGHVHAYERS 339 (472)
Q Consensus 327 lvlsGH~H~Y~R~ 339 (472)
++|+||+|.....
T Consensus 94 ~vl~GH~H~~~~~ 106 (129)
T cd07403 94 LFIHGHTHLNYGY 106 (129)
T ss_pred EEEEcCcCCCcCc
Confidence 9999999975443
No 43
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=98.73 E-value=1.2e-07 Score=88.99 Aligned_cols=107 Identities=14% Similarity=0.308 Sum_probs=66.8
Q ss_pred hCCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHhhhhh---hcCCCeEEecccccccceeec
Q 048036 193 SNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDYWGRYMQPV---LSKVPIMVVEGNHELDFDIYI 269 (472)
Q Consensus 193 ~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~~~~~i~~l---~~~~P~~~v~GNHD~~F~~yi 269 (472)
..+||+|+++||++.. |... -...|.+..+.+..+ ...+|++.++||||..+.
T Consensus 40 ~l~PD~Vi~lGDL~D~------G~~~---------------~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG~~--- 95 (195)
T cd08166 40 FVQPDIVIFLGDLMDE------GSIA---------------NDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIGGE--- 95 (195)
T ss_pred ccCCCEEEEeccccCC------CCCC---------------CHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcCCC---
Confidence 3589999999999952 2211 012344433333333 446899999999997542
Q ss_pred cCChHHHHHHHHHHhcccCCCCCEEEEEecCCcccCCCCCCCchHHHHHHhhhc-CceEEEeccccceeee
Q 048036 270 YITGDQYKWLEEDLVNVDREVTPWLVVTWHAPWYNTYKAHYREAECMRVVAMED-GVDVVFNGHVHAYERS 339 (472)
Q Consensus 270 d~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~y~~~~~~~~~~~~~r~~~le~-~VdlvlsGH~H~Y~R~ 339 (472)
.....++.++... .-| |++.|.|+..... ..+.. ++.+ +++++|+||.|.+.+.
T Consensus 96 -----~~~~~~~~v~RF~---~~F-i~lsH~P~~~~~~------~~~~~-~~~~~~p~~Ifs~H~H~s~~~ 150 (195)
T cd08166 96 -----EEDPIESKIRRFE---KYF-IMLSHVPLLAEGG------QALKH-VVTDLDPDLIFSAHRHKSSIF 150 (195)
T ss_pred -----CCCcCHHHHHHHH---Hhh-eeeeccccccccc------HHHHH-HHHhcCceEEEEcCccceeeE
Confidence 2222333343321 113 9999999876432 13444 5566 9999999999997665
No 44
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.72 E-value=8e-08 Score=93.68 Aligned_cols=76 Identities=16% Similarity=0.312 Sum_probs=46.9
Q ss_pred eEEEEEeecCCCCChH----HHHHHHH--hCCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHHHHH
Q 048036 170 SKIAIVGDQGLTYNTT----STVNHMI--SNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDYWGR 243 (472)
Q Consensus 170 ~~f~v~gD~~~~~~~~----~~l~~l~--~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~~~~ 243 (472)
+|+++++|+|.+.... ..++.+. +.++|+|+++||++. .+. |... . ........+
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~~~~~d~l~i~GDl~d--~~~--g~~~----------~-----~~~~~~~~~ 61 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGEARQADALYILGDLFE--AWI--GDDD----------P-----SPFAREIAA 61 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhhhccCCEEEEccceec--ccc--ccCc----------C-----CHHHHHHHH
Confidence 4799999999875432 2233332 258999999999994 221 1100 0 011233445
Q ss_pred hhhhhhc-CCCeEEeccccccc
Q 048036 244 YMQPVLS-KVPIMVVEGNHELD 264 (472)
Q Consensus 244 ~i~~l~~-~~P~~~v~GNHD~~ 264 (472)
.++.+.. .+|++.++||||..
T Consensus 62 ~l~~l~~~g~~v~~v~GNHD~~ 83 (241)
T PRK05340 62 ALKALSDSGVPCYFMHGNRDFL 83 (241)
T ss_pred HHHHHHHcCCeEEEEeCCCchh
Confidence 5555543 48999999999964
No 45
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=98.70 E-value=8.2e-07 Score=92.69 Aligned_cols=39 Identities=26% Similarity=0.346 Sum_probs=29.3
Q ss_pred CeEEEEEeecCCCCC---------hHHH----HHHHHhCCCCEEEEcCCccc
Q 048036 169 PSKIAIVGDQGLTYN---------TTST----VNHMISNRPDLILLVGDVTY 207 (472)
Q Consensus 169 ~~~f~v~gD~~~~~~---------~~~~----l~~l~~~~~Dfvl~~GDl~y 207 (472)
.+||++++|+|.+.. ...+ ++.+.+.++|+||++||+..
T Consensus 3 ~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd 54 (405)
T TIGR00583 3 TIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFH 54 (405)
T ss_pred ceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCC
Confidence 589999999998732 1223 34445679999999999994
No 46
>PRK09453 phosphodiesterase; Provisional
Probab=98.67 E-value=2.6e-07 Score=86.08 Aligned_cols=143 Identities=20% Similarity=0.250 Sum_probs=78.9
Q ss_pred eEEEEEeecCCCCCh-HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHhhhhh
Q 048036 170 SKIAIVGDQGLTYNT-TSTVNHMISNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDYWGRYMQPV 248 (472)
Q Consensus 170 ~~f~v~gD~~~~~~~-~~~l~~l~~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~~~~~i~~l 248 (472)
+|++++||+|..... .+.++.+.+.++|.++|+||++.. |.. .+..+.|+ .++..+.++.+
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~------~~~----------~~~~~~~~--~~~~~~~l~~~ 62 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYH------GPR----------NPLPEGYA--PKKVAELLNAY 62 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEccccccc------CcC----------CCCccccC--HHHHHHHHHhc
Confidence 489999999965432 234455556789999999999841 100 01111111 22333333332
Q ss_pred hcCCCeEEecccccccceeeccCChHHHHHHHHHHhcccC----CCCCEEEEEecCCcccCCCCCCCchHHHHHHhhhcC
Q 048036 249 LSKVPIMVVEGNHELDFDIYIYITGDQYKWLEEDLVNVDR----EVTPWLVVTWHAPWYNTYKAHYREAECMRVVAMEDG 324 (472)
Q Consensus 249 ~~~~P~~~v~GNHD~~F~~yid~~~~Q~~WL~~~L~~~~r----~~~pw~Iv~~H~P~y~~~~~~~~~~~~~r~~~le~~ 324 (472)
..+++.+.||||... .+ ++. .+..... .-.-.+|++.|...+... .+ .-+.+
T Consensus 63 --~~~v~~V~GNhD~~~--------~~--~~~-~~~~~~~~~~~~l~g~~i~l~HG~~~~~~--------~~---~~~~~ 118 (182)
T PRK09453 63 --ADKIIAVRGNCDSEV--------DQ--MLL-HFPIMAPYQQVLLEGKRLFLTHGHLYGPE--------NL---PALHD 118 (182)
T ss_pred --CCceEEEccCCcchh--------hh--hcc-CCcccCceEEEEECCeEEEEECCCCCChh--------hc---ccccC
Confidence 358999999999521 11 000 0111000 000135788886543210 00 11226
Q ss_pred ceEEEeccccc-eeeeeecccCccCCCCCEEEEeCCCCCC
Q 048036 325 VDVVFNGHVHA-YERSNRVYNYTLDPCGPIHITVGDGGNR 363 (472)
Q Consensus 325 VdlvlsGH~H~-Y~R~~p~~~~~~~~~g~vyiv~G~gG~~ 363 (472)
+|++++||+|. +.+. .+|..++..|+.|.+
T Consensus 119 ~d~vi~GHtH~p~~~~---------~~~~~~iNpGs~~~p 149 (182)
T PRK09453 119 GDVLVYGHTHIPVAEK---------QGGIILFNPGSVSLP 149 (182)
T ss_pred CCEEEECCCCCCcceE---------ECCEEEEECCCcccc
Confidence 89999999996 3222 247889999988764
No 47
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=98.64 E-value=1.2e-07 Score=86.13 Aligned_cols=58 Identities=21% Similarity=0.276 Sum_probs=39.4
Q ss_pred CEEEEEecCCcccCCCCCCCchHHHHHHhhhc-CceEEEeccccceeeeeecccCccCCCCCEEEEe
Q 048036 292 PWLVVTWHAPWYNTYKAHYREAECMRVVAMED-GVDVVFNGHVHAYERSNRVYNYTLDPCGPIHITV 357 (472)
Q Consensus 292 pw~Iv~~H~P~y~~~~~~~~~~~~~r~~~le~-~VdlvlsGH~H~Y~R~~p~~~~~~~~~g~vyiv~ 357 (472)
.-.|||.|.|+++.... ...+.+ ++|+ +|+.++.||.|.-.|-.+-.. +-.|+-|.++
T Consensus 159 ~~fivM~HYPP~s~~~t----~~~~se-vlee~rv~~~lyGHlHgv~~p~~~~s---~v~Gi~y~Lv 217 (230)
T COG1768 159 SKFIVMTHYPPFSDDGT----PGPFSE-VLEEGRVSKCLYGHLHGVPRPNIGFS---NVRGIEYMLV 217 (230)
T ss_pred CeEEEEEecCCCCCCCC----CcchHH-HHhhcceeeEEeeeccCCCCCCCCcc---cccCceEEEE
Confidence 34899999999986432 123445 6777 999999999999766432111 2347777654
No 48
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=98.62 E-value=1.7e-07 Score=88.60 Aligned_cols=155 Identities=21% Similarity=0.316 Sum_probs=73.4
Q ss_pred eEEEEEeecCCCCChHH-HHHHHHhCCCCEEEEcCCcccccccccCCCCCCccc-----cCCCCCC-Ccc--cch-HHHH
Q 048036 170 SKIAIVGDQGLTYNTTS-TVNHMISNRPDLILLVGDVTYSNLYLTNGTGSNCYS-----CSFANSP-IHE--TYQ-PRWD 239 (472)
Q Consensus 170 ~~f~v~gD~~~~~~~~~-~l~~l~~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~-----~~~~~~~-~~e--~y~-~~wd 239 (472)
-++++++|.+...+... .++.+.+.++|+++++||+.-...- .+.|. .+-++.+ +.+ .|+ ...+
T Consensus 6 ~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~------~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~ 79 (255)
T PF14582_consen 6 RKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEAR------SDEYERAQEEQREPDKSEINEEECYDSEALD 79 (255)
T ss_dssp -EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHH------HHHHHHHHHTT----THHHHHHHHHHHHHHH
T ss_pred hhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchh------hhHHHHHhhhccCcchhhhhhhhhhhHHHHH
Confidence 48999999976533322 3334445699999999999842110 00000 0000000 000 000 0122
Q ss_pred HHHHhhhhhhcCCCeEEeccccccc--------cee--------------------e--c-------c----------CC
Q 048036 240 YWGRYMQPVLSKVPIMVVEGNHELD--------FDI--------------------Y--I-------Y----------IT 272 (472)
Q Consensus 240 ~~~~~i~~l~~~~P~~~v~GNHD~~--------F~~--------------------y--i-------d----------~~ 272 (472)
.|++.+.. ..+|.+++|||||.. ++. | + + ..
T Consensus 80 ~ff~~L~~--~~~p~~~vPG~~Dap~~~~lr~a~~~e~v~p~~~~vH~sf~~~~g~y~v~G~GGeI~~~~~~~~~~LrYP 157 (255)
T PF14582_consen 80 KFFRILGE--LGVPVFVVPGNMDAPERFFLREAYNAEIVTPHIHNVHESFFFWKGEYLVAGMGGEITDDQREEEFKLRYP 157 (255)
T ss_dssp HHHHHHHC--C-SEEEEE--TTS-SHHHHHHHHHHCCCC-TTEEE-CTCEEEETTTEEEEEE-SEEESSS-BCSSS-EEE
T ss_pred HHHHHHHh--cCCcEEEecCCCCchHHHHHHHHhccceeccceeeeeeeecccCCcEEEEecCccccCCCccccccccch
Confidence 55555543 479999999999985 110 1 1 0 11
Q ss_pred hHHHHHHHHHHhcccCCCCCEEEEEecCCc-ccCCCCCCCchHHHHHHhhhc-CceEEEecccccee
Q 048036 273 GDQYKWLEEDLVNVDREVTPWLVVTWHAPW-YNTYKAHYREAECMRVVAMED-GVDVVFNGHVHAYE 337 (472)
Q Consensus 273 ~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~-y~~~~~~~~~~~~~r~~~le~-~VdlvlsGH~H~Y~ 337 (472)
....+|..+.|..++ .+-+|+++|.|+ +.....+. ....++. +++. +.++||+||+|.-.
T Consensus 158 ~weaey~lk~l~elk---~~r~IlLfhtpPd~~kg~~h~-GS~~V~d-lIk~~~P~ivl~Ghihe~~ 219 (255)
T PF14582_consen 158 AWEAEYSLKFLRELK---DYRKILLFHTPPDLHKGLIHV-GSAAVRD-LIKTYNPDIVLCGHIHESH 219 (255)
T ss_dssp HHHHHHHHGGGGGCT---SSEEEEEESS-BTBCTCTBTT-SBHHHHH-HHHHH--SEEEE-SSS-EE
T ss_pred HHHHHHHHHHHHhcc---cccEEEEEecCCccCCCcccc-cHHHHHH-HHHhcCCcEEEecccccch
Confidence 223445555555542 234788899999 44433332 3456777 7888 99999999999743
No 49
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=98.60 E-value=3.5e-07 Score=84.64 Aligned_cols=100 Identities=19% Similarity=0.450 Sum_probs=59.8
Q ss_pred hCCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHhhhhhh-------cCCCeEEecccccccc
Q 048036 193 SNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDYWGRYMQPVL-------SKVPIMVVEGNHELDF 265 (472)
Q Consensus 193 ~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~~~~~i~~l~-------~~~P~~~v~GNHD~~F 265 (472)
+.+||+||++||++.. +... -+..|.+..+.+..+. ..+|++.++||||..+
T Consensus 43 ~~~pd~vi~lGDl~d~------~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 43 RLKPDVVLFLGDLFDG------GRIA---------------DSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred hcCCCEEEEeccccCC------cEeC---------------CHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 4699999999999942 1100 0123444333333321 2689999999999753
Q ss_pred eeeccCChHHHHHHHHHHhcccCCCCCEEEEEecCCcccCCCCCCCchHHHHHHhhhc-CceEEEeccccceeeee
Q 048036 266 DIYIYITGDQYKWLEEDLVNVDREVTPWLVVTWHAPWYNTYKAHYREAECMRVVAMED-GVDVVFNGHVHAYERSN 340 (472)
Q Consensus 266 ~~yid~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~y~~~~~~~~~~~~~r~~~le~-~VdlvlsGH~H~Y~R~~ 340 (472)
.. ..++...++... .+.|++.|.|.+. ++++ +++++|+||+|.+-+..
T Consensus 102 ~~--------~~~~~~~~~~f~----~~fi~l~H~p~~~---------------~~~~~~~~~~lsGH~H~~~~~~ 150 (171)
T cd07384 102 GE--------VISFPEVVDRFE----RYFILLTHIPLYR---------------LLDTIKPVLILSGHDHDQCEVV 150 (171)
T ss_pred CC--------ccccHHHHHHHH----hhheeEECCccHH---------------HHhccCceEEEeCcccCCeEEE
Confidence 21 111112222211 1139999999642 2344 78999999999986654
No 50
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.57 E-value=5.7e-07 Score=87.14 Aligned_cols=73 Identities=16% Similarity=0.318 Sum_probs=45.4
Q ss_pred EEEeecCCCCCh----HHHHHHHHh--CCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHhhh
Q 048036 173 AIVGDQGLTYNT----TSTVNHMIS--NRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDYWGRYMQ 246 (472)
Q Consensus 173 ~v~gD~~~~~~~----~~~l~~l~~--~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~~~~~i~ 246 (472)
++++|+|.+... ...++.+.+ .+||+|+++||++. .+. |.. .+ ....+.+.+.++
T Consensus 2 ~~iSDlHl~~~~~~~~~~~l~~l~~~~~~~d~lii~GDi~d--~~~--~~~----------~~-----~~~~~~~~~~l~ 62 (231)
T TIGR01854 2 LFISDLHLSPERPDITALFLDFLREEARKADALYILGDLFE--AWI--GDD----------DP-----STLARSVAQAIR 62 (231)
T ss_pred eEEEecCCCCCChhHHHHHHHHHHhhhccCCEEEEcCceec--ccc--CCC----------CC-----CHHHHHHHHHHH
Confidence 689999987532 234455544 37999999999993 221 110 00 011234445555
Q ss_pred hhhc-CCCeEEeccccccc
Q 048036 247 PVLS-KVPIMVVEGNHELD 264 (472)
Q Consensus 247 ~l~~-~~P~~~v~GNHD~~ 264 (472)
.+.. .+|+++++||||..
T Consensus 63 ~L~~~~~~v~~v~GNHD~~ 81 (231)
T TIGR01854 63 QVSDQGVPCYFMHGNRDFL 81 (231)
T ss_pred HHHHCCCeEEEEcCCCchh
Confidence 5543 58999999999965
No 51
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=98.38 E-value=1.3e-06 Score=82.04 Aligned_cols=110 Identities=21% Similarity=0.384 Sum_probs=63.2
Q ss_pred HHHHHHHh-CCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHhhhhh----------------
Q 048036 186 STVNHMIS-NRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDYWGRYMQPV---------------- 248 (472)
Q Consensus 186 ~~l~~l~~-~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~~~~~i~~l---------------- 248 (472)
...+.+.. .+||.|+++||+.. .++.+ .++|+.....|.+.+-.-
T Consensus 34 ~~~~~~~~~l~Pd~V~fLGDLfd-~~w~~-----------------D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~ 95 (193)
T cd08164 34 HIVSMMQFWLKPDAVVVLGDLFS-SQWID-----------------DEEFAKRADRYRRRFFGRNDWQVGNISLAARTFE 95 (193)
T ss_pred HHHHHHHHhcCCCEEEEeccccC-CCccc-----------------HHHHHHHHHHHHHHhcCCcccccccccccccccc
Confidence 34444443 59999999999993 22211 112333334444433111
Q ss_pred hcCCCeEEecccccccceeeccCChHHHHHHHHHHhcccCCCCCEEEEEecCCcccCCCCCCCchHHHHHHhhhcCceEE
Q 048036 249 LSKVPIMVVEGNHELDFDIYIYITGDQYKWLEEDLVNVDREVTPWLVVTWHAPWYNTYKAHYREAECMRVVAMEDGVDVV 328 (472)
Q Consensus 249 ~~~~P~~~v~GNHD~~F~~yid~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~y~~~~~~~~~~~~~r~~~le~~Vdlv 328 (472)
...+|++.++||||..|.. . --+..++.. ...| |++.|.|.+-. ....++|++
T Consensus 96 ~~~i~~i~V~GNHDIG~~~------~---~~~~~i~RF---~~~F-ilL~H~P~~~~--------------~~~~~~dl~ 148 (193)
T cd08164 96 DGKTPLINIAGNHDVGYGG------E---VTEARIERF---ESLF-ILLTHVPLYKI--------------FLEGKPGLI 148 (193)
T ss_pred cCCceEEEECCcccCCCCC------c---cchHHhhhe---heeE-EEEEcccceec--------------cccCCCCEE
Confidence 1248999999999975421 0 011222222 1223 99999997641 112268999
Q ss_pred Eeccccceeeee
Q 048036 329 FNGHVHAYERSN 340 (472)
Q Consensus 329 lsGH~H~Y~R~~ 340 (472)
||||+|.-++..
T Consensus 149 lSGHtHgGqi~~ 160 (193)
T cd08164 149 LTGHDHEGCDYQ 160 (193)
T ss_pred EeCccCCCeEEE
Confidence 999999866653
No 52
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=98.26 E-value=4.6e-06 Score=81.49 Aligned_cols=38 Identities=16% Similarity=0.143 Sum_probs=27.7
Q ss_pred eEEEEEeecCCCC------Ch----HHHHHHHHhCCCC-EEEEcCCccc
Q 048036 170 SKIAIVGDQGLTY------NT----TSTVNHMISNRPD-LILLVGDVTY 207 (472)
Q Consensus 170 ~~f~v~gD~~~~~------~~----~~~l~~l~~~~~D-fvl~~GDl~y 207 (472)
++|+.++|+|... .. ...++++.+..+| +++..||++.
T Consensus 1 l~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~ 49 (252)
T cd00845 1 LTILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFD 49 (252)
T ss_pred CEEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCC
Confidence 4899999999553 11 2445666666788 8899999984
No 53
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=98.24 E-value=1e-05 Score=80.46 Aligned_cols=57 Identities=21% Similarity=0.231 Sum_probs=33.3
Q ss_pred HHHHHHHhcccCCCCCEEEEEecCCcccCCCCCCCchHHHHHHhhhc--CceEEEecccccee
Q 048036 277 KWLEEDLVNVDREVTPWLVVTWHAPWYNTYKAHYREAECMRVVAMED--GVDVVFNGHVHAYE 337 (472)
Q Consensus 277 ~WL~~~L~~~~r~~~pw~Iv~~H~P~y~~~~~~~~~~~~~r~~~le~--~VdlvlsGH~H~Y~ 337 (472)
++..+.|++ ....-+|+++|.................+. +.+. +||++|+||.|...
T Consensus 173 ~~~v~~lr~---~~~D~IIvl~H~g~~~~~~~~~~~~~~~~~-la~~~~~vD~IlgGHsH~~~ 231 (277)
T cd07410 173 KKYVPKLRA---EGADVVVVLAHGGFERDLEESLTGENAAYE-LAEEVPGIDAILTGHQHRRF 231 (277)
T ss_pred HHHHHHHHH---cCCCEEEEEecCCcCCCcccccCCccHHHH-HHhcCCCCcEEEeCCCcccc
Confidence 344444443 345679999999876532111111112233 4444 99999999999854
No 54
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=98.16 E-value=8e-06 Score=80.48 Aligned_cols=54 Identities=17% Similarity=0.230 Sum_probs=34.1
Q ss_pred CCCCEEEEEecCCcccCCCCCCCchHHHHHHhhh--cCceEEEeccccceeeeeecccCccCCCCCEEEEeCCCCC
Q 048036 289 EVTPWLVVTWHAPWYNTYKAHYREAECMRVVAME--DGVDVVFNGHVHAYERSNRVYNYTLDPCGPIHITVGDGGN 362 (472)
Q Consensus 289 ~~~pw~Iv~~H~P~y~~~~~~~~~~~~~r~~~le--~~VdlvlsGH~H~Y~R~~p~~~~~~~~~g~vyiv~G~gG~ 362 (472)
....-+|++.|-+.... +. +.+ .++|++|+||.|..+... .+++..+-+|+-|.
T Consensus 170 ~~~D~iVvl~H~g~~~d-----------~~-la~~~~~iD~IlgGH~H~~~~~~--------~~~t~vv~~g~~g~ 225 (257)
T cd07406 170 QGADLIIALTHMRLPND-----------KR-LAREVPEIDLILGGHDHEYILVQ--------VGGTPIVKSGSDFR 225 (257)
T ss_pred CCCCEEEEEeccCchhh-----------HH-HHHhCCCCceEEecccceeEeee--------ECCEEEEeCCcCcc
Confidence 44567899999975311 11 233 389999999999866221 23555555666554
No 55
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.15 E-value=1.9e-05 Score=72.99 Aligned_cols=135 Identities=19% Similarity=0.185 Sum_probs=75.5
Q ss_pred eEEEEEeecCCCCCh-HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHhhhhh
Q 048036 170 SKIAIVGDQGLTYNT-TSTVNHMISNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDYWGRYMQPV 248 (472)
Q Consensus 170 ~~f~v~gD~~~~~~~-~~~l~~l~~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~~~~~i~~l 248 (472)
++|++++|+|..... ...++.....++|+|||+||.+.... .+.+...
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~---------------------------~~~l~~~---- 50 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFT---------------------------LDALEGG---- 50 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccc---------------------------hHHhhcc----
Confidence 589999999987532 22333344579999999999995210 0111110
Q ss_pred hcCCCeEEecccccccceeeccCChHH--HHHHHHHHhcccCCCCCEEEEEecCCcccCCCCCCCchHHHHHHhhhcCce
Q 048036 249 LSKVPIMVVEGNHELDFDIYIYITGDQ--YKWLEEDLVNVDREVTPWLVVTWHAPWYNTYKAHYREAECMRVVAMEDGVD 326 (472)
Q Consensus 249 ~~~~P~~~v~GNHD~~F~~yid~~~~Q--~~WL~~~L~~~~r~~~pw~Iv~~H~P~y~~~~~~~~~~~~~r~~~le~~Vd 326 (472)
-..++++|.||.|.. ..| ..|. ..-+. .. -+|.+.|--.|... .+...+...+.+.++|
T Consensus 51 -~~~~i~~V~GN~D~~--------~~~~~~p~~--~~~~~--~g--~ki~l~HGh~~~~~----~~~~~l~~la~~~~~D 111 (172)
T COG0622 51 -LAAKLIAVRGNCDGE--------VDQEELPEE--LVLEV--GG--VKIFLTHGHLYFVK----TDLSLLEYLAKELGAD 111 (172)
T ss_pred -cccceEEEEccCCCc--------cccccCChh--HeEEE--CC--EEEEEECCCccccc----cCHHHHHHHHHhcCCC
Confidence 246889999999952 111 1110 11111 11 26888886444321 1122233213344999
Q ss_pred EEEeccccceeeeeecccCccCCCCCEEEEeCCCCC
Q 048036 327 VVFNGHVHAYERSNRVYNYTLDPCGPIHITVGDGGN 362 (472)
Q Consensus 327 lvlsGH~H~Y~R~~p~~~~~~~~~g~vyiv~G~gG~ 362 (472)
+++.||+|.-.-.. .+|+++|.-|+...
T Consensus 112 vli~GHTH~p~~~~--------~~~i~~vNPGS~s~ 139 (172)
T COG0622 112 VLIFGHTHKPVAEK--------VGGILLVNPGSVSG 139 (172)
T ss_pred EEEECCCCcccEEE--------ECCEEEEcCCCcCC
Confidence 99999999843332 24566665555433
No 56
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=98.11 E-value=5.2e-06 Score=78.96 Aligned_cols=75 Identities=16% Similarity=0.274 Sum_probs=43.3
Q ss_pred EEEeecCCCCChH---HHHHHHHh----CCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHhh
Q 048036 173 AIVGDQGLTYNTT---STVNHMIS----NRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDYWGRYM 245 (472)
Q Consensus 173 ~v~gD~~~~~~~~---~~l~~l~~----~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~~~~~i 245 (472)
++++|+|.+.... ..+..+.+ .++|.++++||++. .+. +... .....+ ...+...+
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~lvl~GDi~d--~~~--~~~~----------~~~~~~---~~~~~~l~ 63 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEADALYLLGDIFD--LWF--GDDE----------VVPPAA---HEVLAALL 63 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCCCEEEEeccEEE--EEe--cCCC----------CCChHH---HHHHHHHH
Confidence 4789999875422 22333322 48999999999993 321 1100 000011 11123334
Q ss_pred hhhhcCCCeEEeccccccc
Q 048036 246 QPVLSKVPIMVVEGNHELD 264 (472)
Q Consensus 246 ~~l~~~~P~~~v~GNHD~~ 264 (472)
+......+++.++||||..
T Consensus 64 ~~~~~~~~v~~v~GNHD~~ 82 (217)
T cd07398 64 RLADRGTRVYYVPGNHDFL 82 (217)
T ss_pred HHHHCCCeEEEECCCchHH
Confidence 4446678999999999987
No 57
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=98.04 E-value=1.1e-05 Score=74.42 Aligned_cols=69 Identities=19% Similarity=0.405 Sum_probs=40.9
Q ss_pred EEEeecCCCCCh--------------HHHHHH----HHhCCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccc
Q 048036 173 AIVGDQGLTYNT--------------TSTVNH----MISNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETY 234 (472)
Q Consensus 173 ~v~gD~~~~~~~--------------~~~l~~----l~~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y 234 (472)
++++|+|.+... .+++++ +.+.++|.+|++||+++... +. .
T Consensus 1 l~isDlHlG~~~~~~~~g~~~p~~~~~~~~~~l~~~~~~~~~d~lii~GDl~~~~~----~~----------------~- 59 (172)
T cd07391 1 LVVADLHLGKEEELRRRGILLPRGQTEDTLERLDRLIEEYGPERLIILGDLKHSFG----GL----------------S- 59 (172)
T ss_pred CEeEeeccchHHHHHhcCCcCCcccHHHHHHHHHHHHHhcCCCEEEEeCccccccc----cc----------------C-
Confidence 368888877421 123333 33468999999999995311 10 0
Q ss_pred hHHHHHHHHhhhhhhcCCCeEEecccccc
Q 048036 235 QPRWDYWGRYMQPVLSKVPIMVVEGNHEL 263 (472)
Q Consensus 235 ~~~wd~~~~~i~~l~~~~P~~~v~GNHD~ 263 (472)
...+.... ........+|++.++||||.
T Consensus 60 ~~~~~~~~-~~~~~~~~~~v~~i~GNHD~ 87 (172)
T cd07391 60 RQEFEEVA-FLRLLAKDVDVILIRGNHDG 87 (172)
T ss_pred HHHHHHHH-HHHhccCCCeEEEEcccCcc
Confidence 11222221 22333457899999999996
No 58
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=98.02 E-value=1.5e-05 Score=73.46 Aligned_cols=33 Identities=21% Similarity=0.141 Sum_probs=22.4
Q ss_pred EEEEEecCCcccCCCCCCCchHHHHHHhhhcCceEEEeccccceeee
Q 048036 293 WLVVTWHAPWYNTYKAHYREAECMRVVAMEDGVDVVFNGHVHAYERS 339 (472)
Q Consensus 293 w~Iv~~H~P~y~~~~~~~~~~~~~r~~~le~~VdlvlsGH~H~Y~R~ 339 (472)
..|++.|.|..... .+.+.|++++||+|.....
T Consensus 108 ~~i~l~H~~~~~~~--------------~~~~~d~vi~GHtH~~~~~ 140 (168)
T cd07390 108 RRVYLSHYPILEWN--------------GLDRGSWNLHGHIHSNSPD 140 (168)
T ss_pred EEEEEEeCCcccCC--------------CCCCCeEEEEeeeCCCCCC
Confidence 47899997653211 1225689999999986554
No 59
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=97.99 E-value=3.4e-05 Score=73.39 Aligned_cols=37 Identities=22% Similarity=0.249 Sum_probs=24.7
Q ss_pred EEEEEeecCCCCChH-HHHHHHHh-CCCCEEEEcCCccc
Q 048036 171 KIAIVGDQGLTYNTT-STVNHMIS-NRPDLILLVGDVTY 207 (472)
Q Consensus 171 ~f~v~gD~~~~~~~~-~~l~~l~~-~~~Dfvl~~GDl~y 207 (472)
|++++||.|...... +.++.+.. .++|.++++||++.
T Consensus 2 ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~ 40 (207)
T cd07424 2 RDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLID 40 (207)
T ss_pred CEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCccc
Confidence 689999999653221 22222221 35899999999994
No 60
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=97.98 E-value=4.7e-05 Score=74.93 Aligned_cols=45 Identities=18% Similarity=0.241 Sum_probs=28.9
Q ss_pred CCCCEEEEEecCCcccCCCCCCCchHHHHHHhhhc--CceEEEeccccceeee
Q 048036 289 EVTPWLVVTWHAPWYNTYKAHYREAECMRVVAMED--GVDVVFNGHVHAYERS 339 (472)
Q Consensus 289 ~~~pw~Iv~~H~P~y~~~~~~~~~~~~~r~~~le~--~VdlvlsGH~H~Y~R~ 339 (472)
....-+|++.|.+....... + .. +. +.+. ++|++|.||.|.....
T Consensus 170 ~~~D~iIvl~H~G~~~~~~~-~---~~-~~-la~~~~giDvIigGH~H~~~~~ 216 (257)
T cd07408 170 KGADVIVALGHLGVDRTSSP-W---TS-TE-LAANVTGIDLIIDGHSHTTIEI 216 (257)
T ss_pred CCCCEEEEEeCcCcCCCCCC-c---cH-HH-HHHhCCCceEEEeCCCcccccC
Confidence 34567999999987653211 1 11 22 2333 9999999999986543
No 61
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=97.95 E-value=1.7e-05 Score=82.71 Aligned_cols=73 Identities=19% Similarity=0.318 Sum_probs=49.3
Q ss_pred eEEEEEeecCCCC-C--h-----------HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccch
Q 048036 170 SKIAIVGDQGLTY-N--T-----------TSTVNHMISNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQ 235 (472)
Q Consensus 170 ~~f~v~gD~~~~~-~--~-----------~~~l~~l~~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~ 235 (472)
+||++++|+|.+. . . ...++.+.+.++||||++||+... .. |..
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~------~~------------Ps~---- 58 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDT------NN------------PSP---- 58 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccC------CC------------CCH----
Confidence 5899999999982 1 1 123455567899999999999842 11 111
Q ss_pred HHHHHHHHhhhhh-hcCCCeEEeccccccc
Q 048036 236 PRWDYWGRYMQPV-LSKVPIMVVEGNHELD 264 (472)
Q Consensus 236 ~~wd~~~~~i~~l-~~~~P~~~v~GNHD~~ 264 (472)
..-..+.+.++.+ ..++|++++.||||..
T Consensus 59 ~a~~~~~~~l~~l~~~~Ipv~~I~GNHD~~ 88 (390)
T COG0420 59 RALKLFLEALRRLKDAGIPVVVIAGNHDSP 88 (390)
T ss_pred HHHHHHHHHHHHhccCCCcEEEecCCCCch
Confidence 1223444555554 2579999999999976
No 62
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=97.91 E-value=2.7e-05 Score=76.63 Aligned_cols=73 Identities=21% Similarity=0.376 Sum_probs=46.5
Q ss_pred eEEEEEeecCCCCCh---------HHHH----HHHHhCCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchH
Q 048036 170 SKIAIVGDQGLTYNT---------TSTV----NHMISNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQP 236 (472)
Q Consensus 170 ~~f~v~gD~~~~~~~---------~~~l----~~l~~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~ 236 (472)
+||++++|+|.+... ...+ +.+.+.++|++|++||++... . |. . .
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~------~------------p~--~--~ 58 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTA------N------------PP--A--E 58 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCC------C------------CC--H--H
Confidence 589999999986421 1223 334457899999999999421 1 00 1 1
Q ss_pred HHHHHHHhhhhhhc-C-CCeEEeccccccc
Q 048036 237 RWDYWGRYMQPVLS-K-VPIMVVEGNHELD 264 (472)
Q Consensus 237 ~wd~~~~~i~~l~~-~-~P~~~v~GNHD~~ 264 (472)
....+.+.++.+.. . +|+++++||||..
T Consensus 59 ~~~~~~~~l~~l~~~~~i~v~~i~GNHD~~ 88 (253)
T TIGR00619 59 AQELFNAFFRNLSDANPIPIVVISGNHDSA 88 (253)
T ss_pred HHHHHHHHHHHHHhcCCceEEEEccCCCCh
Confidence 22334444444432 3 8999999999975
No 63
>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]
Probab=97.91 E-value=0.0001 Score=78.63 Aligned_cols=64 Identities=17% Similarity=0.127 Sum_probs=37.6
Q ss_pred CChHHHHHHHHHHhcccCCCCCEEEEEecCCcccCCCCCCCchHHHHHHh---hhcCceEEEecccccee
Q 048036 271 ITGDQYKWLEEDLVNVDREVTPWLVVTWHAPWYNTYKAHYREAECMRVVA---MEDGVDVVFNGHVHAYE 337 (472)
Q Consensus 271 ~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~y~~~~~~~~~~~~~r~~~---le~~VdlvlsGH~H~Y~ 337 (472)
....|++|+..+|.+++.+. .-+=+++|.|+-...-. ..-....-. . ++.-+--.|.||.|.=+
T Consensus 339 dp~~~lqWf~~~L~~ae~~G-ekVhil~HIPpG~~~c~-~~ws~~f~~-iv~r~~~tI~gqf~GH~h~d~ 405 (577)
T KOG3770|consen 339 DPIDQLQWFVDQLQEAESAG-EKVHILGHIPPGDGVCL-EGWSINFYR-IVNRFRSTIAGQFYGHTHIDE 405 (577)
T ss_pred CchHHhhHHHHHHHHHHhcC-CEEEEEEeeCCCCcchh-hhhhHHHHH-HHHHHHHhhhhhccccCccee
Confidence 55778999999998874332 22567899997542110 011111111 2 23345567999999743
No 64
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=97.89 E-value=8.9e-05 Score=73.27 Aligned_cols=56 Identities=21% Similarity=0.313 Sum_probs=33.8
Q ss_pred CCCEEEEEecCCcccCCCCCCCchHHHHHHhhhc--CceEEEeccccceeeeeecccCccCCCCCEEEEeCCCCC
Q 048036 290 VTPWLVVTWHAPWYNTYKAHYREAECMRVVAMED--GVDVVFNGHVHAYERSNRVYNYTLDPCGPIHITVGDGGN 362 (472)
Q Consensus 290 ~~pw~Iv~~H~P~y~~~~~~~~~~~~~r~~~le~--~VdlvlsGH~H~Y~R~~p~~~~~~~~~g~vyiv~G~gG~ 362 (472)
...-+|++.|-+.... +. +.++ +||++|+||.|..... |+. ..++++.+-+|.-|.
T Consensus 183 ~~D~iI~l~H~g~~~~-----------~~-la~~~~~iDlilgGH~H~~~~~-~~~----~~~~t~v~~~g~~~~ 240 (264)
T cd07411 183 GVDVVVLLSHNGLPVD-----------VE-LAERVPGIDVILSGHTHERTPK-PII----AGGGTLVVEAGSHGK 240 (264)
T ss_pred CCCEEEEEecCCchhh-----------HH-HHhcCCCCcEEEeCcccccccC-ccc----ccCCEEEEEcCcccc
Confidence 4567999999875321 12 2333 8999999999974322 210 124566666666554
No 65
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.87 E-value=0.00033 Score=69.26 Aligned_cols=81 Identities=20% Similarity=0.328 Sum_probs=43.4
Q ss_pred EEEEeecCCCCCh-HHHHHHHHh---CCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHhhhh
Q 048036 172 IAIVGDQGLTYNT-TSTVNHMIS---NRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDYWGRYMQP 247 (472)
Q Consensus 172 f~v~gD~~~~~~~-~~~l~~l~~---~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~~~~~i~~ 247 (472)
|+|.||.|..... .+.++.+.+ .++|++|++||+.-. . +..+.++ ......| ..+..|.+.++.
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~--~--~~~d~~~-------~~~p~k~-~~~~~f~~~~~g 68 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAV--R--NEADLKC-------MAVPPKY-RKMGDFYKYYSG 68 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCc--C--Ccchhhh-------hccchhh-hhhhhHHHHhcC
Confidence 5789999974321 122333332 479999999999631 1 1110000 0001112 124445555443
Q ss_pred h-hcCCCeEEeccccccc
Q 048036 248 V-LSKVPIMVVEGNHELD 264 (472)
Q Consensus 248 l-~~~~P~~~v~GNHD~~ 264 (472)
. ...+|++++.||||..
T Consensus 69 ~~~~p~~t~fi~GNHE~~ 86 (262)
T cd00844 69 EKKAPILTIFIGGNHEAS 86 (262)
T ss_pred CccCCeeEEEECCCCCCH
Confidence 3 2467789999999963
No 66
>TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes.
Probab=97.84 E-value=2.6e-05 Score=81.51 Aligned_cols=64 Identities=14% Similarity=0.313 Sum_probs=45.2
Q ss_pred CChHHHHHHHHHHhcccCCCCCEEEEEecCCcccCCCCC---CC-----------ch---HHHHHHhhhc--CceEEEec
Q 048036 271 ITGDQYKWLEEDLVNVDREVTPWLVVTWHAPWYNTYKAH---YR-----------EA---ECMRVVAMED--GVDVVFNG 331 (472)
Q Consensus 271 ~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~y~~~~~~---~~-----------~~---~~~r~~~le~--~VdlvlsG 331 (472)
+..+|++||+++|+.... +.+++|+++|+|+.+..... +. +. ..+.. +|.+ +|-++|||
T Consensus 329 Ld~eQLaWLe~~La~a~a-~~p~VVV~hHpPi~t~gi~~md~w~~~~~~~~~~L~n~~~~~eLla-LL~~hPnVla~LsG 406 (492)
T TIGR03768 329 LDAKRWDWLKAELARGQA-DGQLMIIAAHIPIAVSPIGSEMEWWLGAADANPDLQNAVSLTGLVT-TLQKYPNLLMWIAG 406 (492)
T ss_pred eCHHHHHHHHHHHHhCcC-CCceEEEEeCCCcccCCccchhhhccccccccccccccccHHHHHH-HHhcCCCeEEEEcC
Confidence 679999999999998743 45789999999987622111 11 11 13444 5666 89999999
Q ss_pred cccce
Q 048036 332 HVHAY 336 (472)
Q Consensus 332 H~H~Y 336 (472)
|.|.-
T Consensus 407 HvHrn 411 (492)
T TIGR03768 407 HRHLN 411 (492)
T ss_pred Ccccc
Confidence 99973
No 67
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.82 E-value=2.3e-05 Score=75.15 Aligned_cols=72 Identities=13% Similarity=0.267 Sum_probs=43.2
Q ss_pred EEeecCCCCChH---HH-HHHHHhC--CCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHhhhh
Q 048036 174 IVGDQGLTYNTT---ST-VNHMISN--RPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDYWGRYMQP 247 (472)
Q Consensus 174 v~gD~~~~~~~~---~~-l~~l~~~--~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~~~~~i~~ 247 (472)
+|+|.|.+.... +. ++-|... +.|.++++||++ +++. |.. .+.+.-++..+.+..
T Consensus 2 FISDlHL~~~~p~~t~~fl~Fl~~~a~~ad~lyilGDif--d~w~--g~~---------------~~~~~~~~V~~~l~~ 62 (237)
T COG2908 2 FISDLHLGPKRPALTAFFLDFLREEAAQADALYILGDIF--DGWI--GDD---------------EPPQLHRQVAQKLLR 62 (237)
T ss_pred eeeccccCCCCcHHHHHHHHHHHhccccCcEEEEechhh--hhhh--cCC---------------cccHHHHHHHHHHHH
Confidence 689999984322 22 2333333 459999999999 5553 211 011222333334444
Q ss_pred hh-cCCCeEEeccccccc
Q 048036 248 VL-SKVPIMVVEGNHELD 264 (472)
Q Consensus 248 l~-~~~P~~~v~GNHD~~ 264 (472)
++ ...|++.++||||.-
T Consensus 63 ~a~~G~~v~~i~GN~Dfl 80 (237)
T COG2908 63 LARKGTRVYYIHGNHDFL 80 (237)
T ss_pred HHhcCCeEEEecCchHHH
Confidence 43 459999999999965
No 68
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=97.78 E-value=0.00011 Score=70.63 Aligned_cols=37 Identities=30% Similarity=0.407 Sum_probs=26.1
Q ss_pred EEEEEeecCCCCChH-HHHHHHH-hCCCCEEEEcCCccc
Q 048036 171 KIAIVGDQGLTYNTT-STVNHMI-SNRPDLILLVGDVTY 207 (472)
Q Consensus 171 ~f~v~gD~~~~~~~~-~~l~~l~-~~~~Dfvl~~GDl~y 207 (472)
|++++||+|...... ++++.+. ..+.|.++++||++.
T Consensus 16 ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vd 54 (218)
T PRK09968 16 HIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNID 54 (218)
T ss_pred eEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcC
Confidence 899999999764322 2333332 236899999999994
No 69
>PRK04036 DNA polymerase II small subunit; Validated
Probab=97.78 E-value=0.00017 Score=77.88 Aligned_cols=86 Identities=14% Similarity=0.303 Sum_probs=51.2
Q ss_pred CCeEEEEEeecCCCCCh------HHHHHHHH---------hCCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcc
Q 048036 168 YPSKIAIVGDQGLTYNT------TSTVNHMI---------SNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHE 232 (472)
Q Consensus 168 ~~~~f~v~gD~~~~~~~------~~~l~~l~---------~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e 232 (472)
..+++++++|+|.+... ...++.+. ..+++.+|++||++...+.. .+... +....+
T Consensus 242 ~~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~-p~~~~--------~~~~~~ 312 (504)
T PRK04036 242 EKVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIY-PGQEE--------ELEIVD 312 (504)
T ss_pred CccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCC-ccchh--------hccchh
Confidence 36899999999977531 12234444 45789999999999421100 00000 000001
Q ss_pred cchHHHHHHHHhhhhhhcCCCeEEecccccc
Q 048036 233 TYQPRWDYWGRYMQPVLSKVPIMVVEGNHEL 263 (472)
Q Consensus 233 ~y~~~wd~~~~~i~~l~~~~P~~~v~GNHD~ 263 (472)
.+ .+.+.+.+.++.+...+|+++++||||.
T Consensus 313 ~~-~~~~~l~~~L~~L~~~i~V~~ipGNHD~ 342 (504)
T PRK04036 313 IY-EQYEAAAEYLKQIPEDIKIIISPGNHDA 342 (504)
T ss_pred hH-HHHHHHHHHHHhhhcCCeEEEecCCCcc
Confidence 11 1234555666667778999999999995
No 70
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.77 E-value=0.00065 Score=66.84 Aligned_cols=74 Identities=23% Similarity=0.263 Sum_probs=43.7
Q ss_pred HHHHHHHhcccCCCCCEEEEEecCCcccCCCCCCCchHHHHHHhhhcCceEEEeccccceeeeeecccCccCCCCCEEEE
Q 048036 277 KWLEEDLVNVDREVTPWLVVTWHAPWYNTYKAHYREAECMRVVAMEDGVDVVFNGHVHAYERSNRVYNYTLDPCGPIHIT 356 (472)
Q Consensus 277 ~WL~~~L~~~~r~~~pw~Iv~~H~P~y~~~~~~~~~~~~~r~~~le~~VdlvlsGH~H~Y~R~~p~~~~~~~~~g~vyiv 356 (472)
+-+++.+++... ...-+||.+|.-.. .+...+.. .+..+||+++.||.|... .+.++-++|+.|+.
T Consensus 128 ~~~~~~v~~lk~-~~D~IIV~~H~g~t-------sEk~ala~-~ldg~VdvIvGtHTHv~t-----~d~~il~~gTa~it 193 (255)
T cd07382 128 RAADELLEELKE-EADIIFVDFHAEAT-------SEKIALGW-YLDGRVSAVVGTHTHVQT-----ADERILPGGTAYIT 193 (255)
T ss_pred HHHHHHHHHHhc-CCCEEEEEECCCCC-------HHHHHHHH-hCCCCceEEEeCCCCccC-----CccEEeeCCeEEEe
Confidence 335555555432 45679999998431 11112222 344479999999999732 12222357898886
Q ss_pred -eCCCCCCC
Q 048036 357 -VGDGGNRE 364 (472)
Q Consensus 357 -~G~gG~~~ 364 (472)
.|.-|...
T Consensus 194 d~Gm~G~~~ 202 (255)
T cd07382 194 DVGMTGPYD 202 (255)
T ss_pred cCccccCCC
Confidence 56666543
No 71
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.74 E-value=9e-05 Score=77.82 Aligned_cols=73 Identities=21% Similarity=0.377 Sum_probs=45.2
Q ss_pred eEEEEEeecCCCCCh---------H----HHHHHHHhCCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchH
Q 048036 170 SKIAIVGDQGLTYNT---------T----STVNHMISNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQP 236 (472)
Q Consensus 170 ~~f~v~gD~~~~~~~---------~----~~l~~l~~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~ 236 (472)
+||++++|+|.+... . ..++.+.+.+||+||++||++.. +.. ..+
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~------~~p--------------~~~-- 58 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDT------GSP--------------PSY-- 58 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccC------CCC--------------cHH--
Confidence 589999999987321 1 12333456799999999999831 111 001
Q ss_pred HHHHHHHhhhhhh-cCCCeEEeccccccc
Q 048036 237 RWDYWGRYMQPVL-SKVPIMVVEGNHELD 264 (472)
Q Consensus 237 ~wd~~~~~i~~l~-~~~P~~~v~GNHD~~ 264 (472)
....+.+.+..+. ..+|+++++||||..
T Consensus 59 a~~~~~~~l~~L~~~~~~v~~I~GNHD~~ 87 (407)
T PRK10966 59 ARELYNRFVVNLQQTGCQLVVLAGNHDSV 87 (407)
T ss_pred HHHHHHHHHHHHHhcCCcEEEEcCCCCCh
Confidence 1122223333332 358999999999975
No 72
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=97.74 E-value=7e-05 Score=71.50 Aligned_cols=70 Identities=16% Similarity=0.113 Sum_probs=39.7
Q ss_pred EEEeecCCCCChH-HHHHHHH--------hCCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHHHHH
Q 048036 173 AIVGDQGLTYNTT-STVNHMI--------SNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDYWGR 243 (472)
Q Consensus 173 ~v~gD~~~~~~~~-~~l~~l~--------~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~~~~ 243 (472)
+++||+|...... +.++.+. ..+.|.++++||++. .|... ....+...+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vd------rG~~~----------------~~vl~~l~~ 58 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFD------RGPDV----------------IEILWLLYK 58 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcC------CCcCH----------------HHHHHHHHH
Confidence 4799999874322 2222221 136799999999994 23210 112222222
Q ss_pred hhh-hhhcCCCeEEeccccccc
Q 048036 244 YMQ-PVLSKVPIMVVEGNHELD 264 (472)
Q Consensus 244 ~i~-~l~~~~P~~~v~GNHD~~ 264 (472)
... ......+++++.||||..
T Consensus 59 l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 59 LEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred HHHHHHhcCCeEEEeeCCCcHH
Confidence 211 122356899999999976
No 73
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.71 E-value=0.0001 Score=75.57 Aligned_cols=74 Identities=18% Similarity=0.232 Sum_probs=45.0
Q ss_pred eEEEEEeecCCCCCh---------HHHHHH----HHhCCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchH
Q 048036 170 SKIAIVGDQGLTYNT---------TSTVNH----MISNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQP 236 (472)
Q Consensus 170 ~~f~v~gD~~~~~~~---------~~~l~~----l~~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~ 236 (472)
+||++++|+|.+... ...+++ +.+.++|+||++||++.. .. . +. ..
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~--~~--~-------------~~----~~ 59 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDV--RK--A-------------IT----QN 59 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCC--CC--C-------------CC----HH
Confidence 489999999987321 123333 446799999999999832 10 0 00 11
Q ss_pred HHHHHHH-hhhhh-hcCCCeEEeccccccc
Q 048036 237 RWDYWGR-YMQPV-LSKVPIMVVEGNHELD 264 (472)
Q Consensus 237 ~wd~~~~-~i~~l-~~~~P~~~v~GNHD~~ 264 (472)
......+ .++.+ ...+|+++++||||..
T Consensus 60 ~~~~~~~~l~~~L~~~gi~v~~I~GNHD~~ 89 (340)
T PHA02546 60 TMNFVREKIFDLLKEAGITLHVLVGNHDMY 89 (340)
T ss_pred HHHHHHHHHHHHHHHCCCeEEEEccCCCcc
Confidence 1121112 13333 2469999999999964
No 74
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=97.68 E-value=0.00051 Score=68.85 Aligned_cols=81 Identities=17% Similarity=0.130 Sum_probs=42.4
Q ss_pred HHHHHHhcccCCCCCEEEEEecCCcccCCCCC-CCc-hHHHHHHh--hhcCceEEEeccccceeeeeecccCccCCCCCE
Q 048036 278 WLEEDLVNVDREVTPWLVVTWHAPWYNTYKAH-YRE-AECMRVVA--MEDGVDVVFNGHVHAYERSNRVYNYTLDPCGPI 353 (472)
Q Consensus 278 WL~~~L~~~~r~~~pw~Iv~~H~P~y~~~~~~-~~~-~~~~r~~~--le~~VdlvlsGH~H~Y~R~~p~~~~~~~~~g~v 353 (472)
-+++.+++....+..-+|++.|.......... ... .......+ +..++|++|+||.|..... +. ...+++.
T Consensus 179 ~~~~~v~~lr~~~~D~IIvL~H~G~~~~~~~~~~~~~~~~~~~l~~~~~~~iD~IlgGHsH~~~~~-~~----~~~~~~~ 253 (288)
T cd07412 179 AINAVAPELKAGGVDAIVVLAHEGGSTKGGDDTCSAASGPIADIVNRLDPDVDVVFAGHTHQAYNC-TV----PAGNPRL 253 (288)
T ss_pred HHHHHHHHHHHCCCCEEEEEeCCCCCCCCCCccccccChhHHHHHhhcCCCCCEEEeCccCccccc-cc----cCcCCEE
Confidence 34444443332345679999998765322110 000 00112201 2238999999999986542 11 0124666
Q ss_pred EEEeCCCCCC
Q 048036 354 HITVGDGGNR 363 (472)
Q Consensus 354 yiv~G~gG~~ 363 (472)
.+-+|+-|..
T Consensus 254 v~q~g~~g~~ 263 (288)
T cd07412 254 VTQAGSYGKA 263 (288)
T ss_pred EEecChhhce
Confidence 6666666653
No 75
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=97.67 E-value=0.00039 Score=82.35 Aligned_cols=40 Identities=20% Similarity=0.302 Sum_probs=28.8
Q ss_pred CCeEEEEEeecCCCCCh----HHHHHHHHhCCCCEEEE-cCCccc
Q 048036 168 YPSKIAIVGDQGLTYNT----TSTVNHMISNRPDLILL-VGDVTY 207 (472)
Q Consensus 168 ~~~~f~v~gD~~~~~~~----~~~l~~l~~~~~Dfvl~-~GDl~y 207 (472)
..++|+.++|+|..... ...++++.+.+++.+++ +||++.
T Consensus 659 ~~l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~ 703 (1163)
T PRK09419 659 WELTILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQ 703 (1163)
T ss_pred eEEEEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCC
Confidence 46999999999965322 23456666678887755 999984
No 76
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=97.64 E-value=0.00028 Score=70.47 Aligned_cols=49 Identities=16% Similarity=0.273 Sum_probs=30.8
Q ss_pred HHHHHHHhcccCCCCCEEEEEecCCcccCCCCCCCchHHHHHHhhhc--CceEEEecccccee
Q 048036 277 KWLEEDLVNVDREVTPWLVVTWHAPWYNTYKAHYREAECMRVVAMED--GVDVVFNGHVHAYE 337 (472)
Q Consensus 277 ~WL~~~L~~~~r~~~pw~Iv~~H~P~y~~~~~~~~~~~~~r~~~le~--~VdlvlsGH~H~Y~ 337 (472)
+.+++.+++.......-+|++.|-.... -+. +.++ ++|++|+||.|...
T Consensus 169 ~~~~~~v~~lr~~~~D~II~l~H~G~~~-----------d~~-la~~~~giD~IiggH~H~~~ 219 (281)
T cd07409 169 EAAQKEADKLKAQGVNKIIALSHSGYEV-----------DKE-IARKVPGVDVIVGGHSHTFL 219 (281)
T ss_pred HHHHHHHHHHHhcCCCEEEEEeccCchh-----------HHH-HHHcCCCCcEEEeCCcCccc
Confidence 4455555554333456688888886421 122 3333 99999999999854
No 77
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=97.51 E-value=0.0018 Score=64.80 Aligned_cols=73 Identities=14% Similarity=0.162 Sum_probs=40.8
Q ss_pred HHHHHHHHhcccCCCCCEEEEEecCCcccCCCCCCCchHHHHHHhhhc--Cce-EEEeccccceeeeeecccCccCCCCC
Q 048036 276 YKWLEEDLVNVDREVTPWLVVTWHAPWYNTYKAHYREAECMRVVAMED--GVD-VVFNGHVHAYERSNRVYNYTLDPCGP 352 (472)
Q Consensus 276 ~~WL~~~L~~~~r~~~pw~Iv~~H~P~y~~~~~~~~~~~~~r~~~le~--~Vd-lvlsGH~H~Y~R~~p~~~~~~~~~g~ 352 (472)
.+|+.+.|++ ....-+|++.|........ ..+..+. +.+. ++| ++|.||.|..... ++ .+|+
T Consensus 176 ~~~v~~~l~~---~~~DvIIvlsH~G~~~d~~----~~~~~~~-la~~~~~id~~Ii~GHsH~~~~~-~~------~~~~ 240 (282)
T cd07407 176 EPWFQDAINN---EDVDLILVLGHMPVRDDAE----FKVLHDA-IRKIFPDTPIQFLGGHSHVRDFT-QY------DSSS 240 (282)
T ss_pred HHHHHHHHHh---cCCCEEEEEeCCCCCCCcc----HHHHHHH-HHHhCCCCCEEEEeCCcccccce-ec------cCcE
Confidence 3488777764 2355699999998653311 0111112 2222 566 7999999974322 22 1455
Q ss_pred EEEEeCCCCCC
Q 048036 353 IHITVGDGGNR 363 (472)
Q Consensus 353 vyiv~G~gG~~ 363 (472)
..+-.|.-|..
T Consensus 241 ~ivq~G~~g~~ 251 (282)
T cd07407 241 TGLESGRYLET 251 (282)
T ss_pred EEEeccchhhc
Confidence 55556665543
No 78
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=97.42 E-value=0.00072 Score=61.21 Aligned_cols=113 Identities=16% Similarity=0.092 Sum_probs=71.7
Q ss_pred EEEeecCCCCChHHHHHHHH-----hCCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHhhh-
Q 048036 173 AIVGDQGLTYNTTSTVNHMI-----SNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDYWGRYMQ- 246 (472)
Q Consensus 173 ~v~gD~~~~~~~~~~l~~l~-----~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~~~~~i~- 246 (472)
+++||.+.. ..++++++. +.++|++|++||+.-.+. ..+.|..++.
T Consensus 1 LV~G~~~G~--l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~--------------------------~~~~~~~y~~g 52 (150)
T cd07380 1 LVCGDVNGR--LKALFEKVNTINKKKGPFDALLCVGDFFGDDE--------------------------DDEELEAYKDG 52 (150)
T ss_pred CeeecCCcc--HHHHHHHHHHHhcccCCeeEEEEecCccCCcc--------------------------chhhHHHHhcC
Confidence 478888754 334444432 247899999999984210 0023333333
Q ss_pred hhhcCCCeEEecccccccceeeccCChHHHHHHHHHHhcccCCCCCEEEEEecCCcccCCC-C--------CCCchHHHH
Q 048036 247 PVLSKVPIMVVEGNHELDFDIYIYITGDQYKWLEEDLVNVDREVTPWLVVTWHAPWYNTYK-A--------HYREAECMR 317 (472)
Q Consensus 247 ~l~~~~P~~~v~GNHD~~F~~yid~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~y~~~~-~--------~~~~~~~~r 317 (472)
.....+|.|++-|||+ +.-|++.|.|++.... . .......++
T Consensus 53 ~~~~pipTyf~ggn~~-----------------------------~~DILlTh~wP~gi~~~~~~~~~~~~~~~GS~~i~ 103 (150)
T cd07380 53 SKKVPIPTYFLGGNNP-----------------------------GVDILLTSEWPKGISKLSKVPFEETLLICGSDLIA 103 (150)
T ss_pred CccCCCCEEEECCCCC-----------------------------CCCEEECCCCchhhhhhCCCcccccccCCCCHHHH
Confidence 2345789999999992 2259999999987521 1 111234566
Q ss_pred HHhhhc-CceEEEecccc-ceeeeeeccc
Q 048036 318 VVAMED-GVDVVFNGHVH-AYERSNRVYN 344 (472)
Q Consensus 318 ~~~le~-~VdlvlsGH~H-~Y~R~~p~~~ 344 (472)
. +++. +..++||||.| .|||- |-.+
T Consensus 104 ~-l~~~lkPrYhf~gh~~~fyer~-Pf~~ 130 (150)
T cd07380 104 E-LAKKLKPRYHFAGLEGVFYERE-PYRN 130 (150)
T ss_pred H-HHHHcCCCeEeecCCCceEeec-CccC
Confidence 6 6666 99999999999 57775 5543
No 79
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=97.35 E-value=0.0055 Score=60.65 Aligned_cols=73 Identities=25% Similarity=0.278 Sum_probs=45.8
Q ss_pred HHHHHHhcccCCCCCEEEEEecCCcccCCCCCCCchHHHHHHhhhcCceEEEeccccceeeeeecccCccCCCCCEEEE-
Q 048036 278 WLEEDLVNVDREVTPWLVVTWHAPWYNTYKAHYREAECMRVVAMEDGVDVVFNGHVHAYERSNRVYNYTLDPCGPIHIT- 356 (472)
Q Consensus 278 WL~~~L~~~~r~~~pw~Iv~~H~P~y~~~~~~~~~~~~~r~~~le~~VdlvlsGH~H~Y~R~~p~~~~~~~~~g~vyiv- 356 (472)
-+++.+++.+. +++.+||.+|.-.- .+...+.. .++.+||+|+.-|.|..-- +.++-++|+-|++
T Consensus 132 ~~d~~i~~lk~-~~d~IIVd~Haeat-------sEK~a~~~-~ldg~vsaVvGtHtHV~Ta-----D~~il~~gtayitD 197 (266)
T TIGR00282 132 VLKELINMLKK-DCDLIFVDFHAETT-------SEKNAFGM-AFDGYVTAVVGTHTHVPTA-----DLRILPKGTAYITD 197 (266)
T ss_pred HHHHHHHhhhc-CCCEEEEEeCCCCH-------HHHHHHHH-HhCCCccEEEeCCCCCCCC-----cceeCCCCCEEEec
Confidence 34444554432 35679999997531 12233444 5666999999999997321 2222368999997
Q ss_pred eCCCCCCC
Q 048036 357 VGDGGNRE 364 (472)
Q Consensus 357 ~G~gG~~~ 364 (472)
.|.-|...
T Consensus 198 ~Gm~G~~~ 205 (266)
T TIGR00282 198 VGMTGPFG 205 (266)
T ss_pred CCcccCcc
Confidence 67777653
No 80
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=97.28 E-value=0.0018 Score=64.81 Aligned_cols=47 Identities=17% Similarity=0.219 Sum_probs=28.0
Q ss_pred CCCEEEEEecCCcccCCCCCC--CchHHHHHHhh-hcCceEEEecccccee
Q 048036 290 VTPWLVVTWHAPWYNTYKAHY--REAECMRVVAM-EDGVDVVFNGHVHAYE 337 (472)
Q Consensus 290 ~~pw~Iv~~H~P~y~~~~~~~--~~~~~~r~~~l-e~~VdlvlsGH~H~Y~ 337 (472)
...-+|++.|-.......... .....+.. .+ ..++|++|.||.|...
T Consensus 173 ~~D~VI~lsH~G~~~~~~~~~~~~~~~~lA~-~~~~~giD~IigGHsH~~~ 222 (285)
T cd07405 173 KPDIVIAATHMGHYDNGEHGSNAPGDVEMAR-ALPAGGLDLIVGGHSQDPV 222 (285)
T ss_pred CCCEEEEEecccccCCccccccCchHHHHHH-hcCCCCCCEEEeCCCCccc
Confidence 455699999998754321100 11112222 23 2499999999999854
No 81
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=97.19 E-value=0.0013 Score=71.93 Aligned_cols=35 Identities=17% Similarity=0.254 Sum_probs=22.6
Q ss_pred CCEEEEEecCCcccCCCCCCCchHHHHHHhhhc--CceEEEecccccee
Q 048036 291 TPWLVVTWHAPWYNTYKAHYREAECMRVVAMED--GVDVVFNGHVHAYE 337 (472)
Q Consensus 291 ~pw~Iv~~H~P~y~~~~~~~~~~~~~r~~~le~--~VdlvlsGH~H~Y~ 337 (472)
..-+|++.|..... + .. +.++ +||++|.||.|.+.
T Consensus 183 ~D~II~lsH~g~~~-------d----~~-la~~~~~iD~IigGHsH~~~ 219 (550)
T TIGR01530 183 INKIILLSHAGFEK-------N----CE-IAQKINDIDVIVSGDSHYLL 219 (550)
T ss_pred CCEEEEEecCCcHH-------H----HH-HHhcCCCCCEEEeCCCCccc
Confidence 44577777764311 0 11 3333 89999999999954
No 82
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=97.17 E-value=0.004 Score=67.57 Aligned_cols=61 Identities=15% Similarity=0.152 Sum_probs=34.2
Q ss_pred HHHHHHHHHHhcccCCCCCEEEEEecCCcccCCCCCCCchHHHHHHhhhcCceEEEeccccce
Q 048036 274 DQYKWLEEDLVNVDREVTPWLVVTWHAPWYNTYKAHYREAECMRVVAMEDGVDVVFNGHVHAY 336 (472)
Q Consensus 274 ~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~y~~~~~~~~~~~~~r~~~le~~VdlvlsGH~H~Y 336 (472)
...+++++.+.+...+...-+|++.|-+......... ....... ....++|+++.||.|.+
T Consensus 187 d~~e~~~~~i~elk~~~vD~iI~LsH~G~~~d~~~~~-~~~~~~~-~~~~~iD~i~~GH~H~~ 247 (517)
T COG0737 187 DPIEAAKKYIPELKGEGVDVIIALSHLGIEDDLELAS-EVPGDVD-VAVPGIDLIIGGHSHTV 247 (517)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEEeccCcCccccccc-ccccccc-ccccCcceEeccCCccc
Confidence 4455666666555333255699999998765422110 0000011 11124999999999964
No 83
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=97.11 E-value=0.0026 Score=69.55 Aligned_cols=47 Identities=15% Similarity=0.186 Sum_probs=27.7
Q ss_pred CCCEEEEEecCCcccCCCCCC--CchHHHHHHhhhc-CceEEEecccccee
Q 048036 290 VTPWLVVTWHAPWYNTYKAHY--REAECMRVVAMED-GVDVVFNGHVHAYE 337 (472)
Q Consensus 290 ~~pw~Iv~~H~P~y~~~~~~~--~~~~~~r~~~le~-~VdlvlsGH~H~Y~ 337 (472)
...-+|++.|........... .....+-. .+.. +||++|.||.|.+-
T Consensus 209 ~~D~IV~LsH~G~~~~~~~~~~~~~d~~la~-~~~~~~IDvIlgGHsH~~~ 258 (551)
T PRK09558 209 KPDVIIALTHMGHYDDGEHGSNAPGDVEMAR-SLPAGGLDMIVGGHSQDPV 258 (551)
T ss_pred CCCEEEEEeccccccCCccCCCCccHHHHHH-hCCccCceEEEeCCCCccc
Confidence 456799999998754221100 01111211 2333 89999999999853
No 84
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=97.10 E-value=0.0044 Score=70.14 Aligned_cols=44 Identities=25% Similarity=0.212 Sum_probs=26.6
Q ss_pred CCCEEEEEecCCcccCCCCCCCchHHHHHHhhhc--CceEEEeccccce
Q 048036 290 VTPWLVVTWHAPWYNTYKAHYREAECMRVVAMED--GVDVVFNGHVHAY 336 (472)
Q Consensus 290 ~~pw~Iv~~H~P~y~~~~~~~~~~~~~r~~~le~--~VdlvlsGH~H~Y 336 (472)
...-||++.|..+.........+.... .+.+ +||++|.||.|..
T Consensus 309 GaDvIIaLsH~G~~~d~~~~~~En~~~---~LA~v~GIDaIvgGHsH~~ 354 (814)
T PRK11907 309 GADIVLVLSHSGIGDDQYEVGEENVGY---QIASLSGVDAVVTGHSHAE 354 (814)
T ss_pred CCCEEEEEeCCCcccccccccccchhh---HHhcCCCCCEEEECCCCCc
Confidence 456799999988653211111111111 2233 9999999999984
No 85
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=97.08 E-value=0.0083 Score=67.79 Aligned_cols=45 Identities=22% Similarity=0.169 Sum_probs=27.6
Q ss_pred CCCEEEEEecCCcccCCCCCCCchHHHHHHhhhc--CceEEEecccccee
Q 048036 290 VTPWLVVTWHAPWYNTYKAHYREAECMRVVAMED--GVDVVFNGHVHAYE 337 (472)
Q Consensus 290 ~~pw~Iv~~H~P~y~~~~~~~~~~~~~r~~~le~--~VdlvlsGH~H~Y~ 337 (472)
...-||++.|..+-...... ..+.... .++. +||++|.||.|..-
T Consensus 244 GaDvIIaLsH~G~~~d~~~~--~~ena~~-~l~~v~gID~IlgGHsH~~~ 290 (780)
T PRK09418 244 GADVIVALAHSGVDKSGYNV--GMENASY-YLTEVPGVDAVLMGHSHTEV 290 (780)
T ss_pred CCCEEEEEeccCcccccccc--cchhhhH-HHhcCCCCCEEEECCCCCcc
Confidence 45679999998764321110 1111111 3454 99999999999864
No 86
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=96.95 E-value=0.0053 Score=68.08 Aligned_cols=44 Identities=25% Similarity=0.216 Sum_probs=27.5
Q ss_pred CCCEEEEEecCCcccCCCCCCCchHHHHHHhhhc--CceEEEeccccce
Q 048036 290 VTPWLVVTWHAPWYNTYKAHYREAECMRVVAMED--GVDVVFNGHVHAY 336 (472)
Q Consensus 290 ~~pw~Iv~~H~P~y~~~~~~~~~~~~~r~~~le~--~VdlvlsGH~H~Y 336 (472)
...-+|++.|.......... ..+.... .+++ +||++|.||.|..
T Consensus 195 gaDvII~LsH~G~~~d~~~~--~~en~~~-~l~~v~gID~Il~GHsH~~ 240 (626)
T TIGR01390 195 GADIIVALAHSGISADPYQP--GAENSAY-YLTKVPGIDAVLFGHSHAV 240 (626)
T ss_pred CCCEEEEEeccCcCCCcccc--ccchHHH-HHhcCCCCCEEEcCCCCcc
Confidence 45679999999865421110 1111222 3455 9999999999984
No 87
>cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain. PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF
Probab=96.92 E-value=0.0015 Score=62.69 Aligned_cols=94 Identities=17% Similarity=0.199 Sum_probs=53.2
Q ss_pred EEEEEeecCCCCChHHHHHHHH----hCCCCEEEEcCCcccccccccCCCCCC--ccccCCCCCCCcccchHHHHHHH--
Q 048036 171 KIAIVGDQGLTYNTTSTVNHMI----SNRPDLILLVGDVTYSNLYLTNGTGSN--CYSCSFANSPIHETYQPRWDYWG-- 242 (472)
Q Consensus 171 ~f~v~gD~~~~~~~~~~l~~l~----~~~~Dfvl~~GDl~y~d~~~~~G~~~~--~~~~~~~~~~~~e~y~~~wd~~~-- 242 (472)
||++.+..+...........+. +.++||+|++||.+|+|.......... .-..........+.|+..+..+.
T Consensus 1 r~a~~SC~~~~~~~~~~~~~~~~~~~~~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~~~ 80 (228)
T cd07389 1 RFAFGSCNKYESGYFNAYRALAYDHSEEDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEEYRERYRQYRSD 80 (228)
T ss_pred CEEEEECCCCCCCCcHHHHHHhhhccccCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHHHHHHHHHHcCC
Confidence 3666666655544334444454 679999999999999875321000000 00000000112334555555443
Q ss_pred HhhhhhhcCCCeEEeccccccc
Q 048036 243 RYMQPVLSKVPIMVVEGNHELD 264 (472)
Q Consensus 243 ~~i~~l~~~~P~~~v~GNHD~~ 264 (472)
..++.+.+++|++.++.+||+.
T Consensus 81 p~~~~~~~~~p~~~iwDDHDi~ 102 (228)
T cd07389 81 PDLQRLLAQVPTIGIWDDHDIG 102 (228)
T ss_pred HHHHHHhhcCCEEEeccccccc
Confidence 2455667889999999999985
No 88
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=96.89 E-value=0.0031 Score=65.33 Aligned_cols=75 Identities=17% Similarity=0.347 Sum_probs=49.1
Q ss_pred CeEEEEEeecCCCCChH--------------HHHHH----HH-hCCCCEEEEcCCcccccccccCCCCCCccccCCCCCC
Q 048036 169 PSKIAIVGDQGLTYNTT--------------STVNH----MI-SNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSP 229 (472)
Q Consensus 169 ~~~f~v~gD~~~~~~~~--------------~~l~~----l~-~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~ 229 (472)
++|++.++|.|.-.+.. .-+++ +. ..+||.++++||+..+ |...+
T Consensus 48 ~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDe------G~~~~---------- 111 (410)
T KOG3662|consen 48 STKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDE------GQWAG---------- 111 (410)
T ss_pred ceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEecccccc------CccCC----------
Confidence 78999999999754210 01111 11 2599999999999942 33211
Q ss_pred CcccchHHHHHHHHhhhhh---hcCCCeEEeccccccc
Q 048036 230 IHETYQPRWDYWGRYMQPV---LSKVPIMVVEGNHELD 264 (472)
Q Consensus 230 ~~e~y~~~wd~~~~~i~~l---~~~~P~~~v~GNHD~~ 264 (472)
+++|.+..+.++.+ ...+|.+.++||||..
T Consensus 112 -----~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDIG 144 (410)
T KOG3662|consen 112 -----DEEFKKRYERFKKIFGRKGNIKVIYIAGNHDIG 144 (410)
T ss_pred -----hHHHHHHHHHHHHhhCCCCCCeeEEeCCccccc
Confidence 24565544444443 3579999999999998
No 89
>PHA02239 putative protein phosphatase
Probab=96.83 E-value=0.0024 Score=62.11 Aligned_cols=70 Identities=19% Similarity=0.281 Sum_probs=42.0
Q ss_pred eEEEEEeecCCCCCh-HHHHHHHHhC--CCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHhhh
Q 048036 170 SKIAIVGDQGLTYNT-TSTVNHMISN--RPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDYWGRYMQ 246 (472)
Q Consensus 170 ~~f~v~gD~~~~~~~-~~~l~~l~~~--~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~~~~~i~ 246 (472)
++++++||.|..... .+.++++... ..|.++++||++. .|..+ ....+.+++.
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iD------rG~~s----------------~~v~~~l~~~-- 56 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVD------RGKRS----------------KDVVNYIFDL-- 56 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCC------CCCCh----------------HHHHHHHHHH--
Confidence 378999999965322 2334444332 3599999999994 23210 1122222222
Q ss_pred hhhcCCCeEEeccccccc
Q 048036 247 PVLSKVPIMVVEGNHELD 264 (472)
Q Consensus 247 ~l~~~~P~~~v~GNHD~~ 264 (472)
+....++++++||||..
T Consensus 57 -~~~~~~~~~l~GNHE~~ 73 (235)
T PHA02239 57 -MSNDDNVVTLLGNHDDE 73 (235)
T ss_pred -hhcCCCeEEEECCcHHH
Confidence 22345789999999975
No 90
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=96.82 E-value=0.0073 Score=67.25 Aligned_cols=44 Identities=23% Similarity=0.197 Sum_probs=26.9
Q ss_pred CCCEEEEEecCCcccCCCCCCCchHHHHHHhhhc--CceEEEeccccce
Q 048036 290 VTPWLVVTWHAPWYNTYKAHYREAECMRVVAMED--GVDVVFNGHVHAY 336 (472)
Q Consensus 290 ~~pw~Iv~~H~P~y~~~~~~~~~~~~~r~~~le~--~VdlvlsGH~H~Y 336 (472)
...-+|++.|.......... ..+..-. .+.+ +||++|.||.|..
T Consensus 218 gaDvII~LsH~G~~~d~~~~--~aen~~~-~l~~v~gID~Il~GHsH~~ 263 (649)
T PRK09420 218 GADIVVAIPHSGISADPYKA--MAENSVY-YLSEVPGIDAIMFGHSHAV 263 (649)
T ss_pred CCCEEEEEecCCcCCCCccc--cccchhH-HHhcCCCCCEEEeCCCCcc
Confidence 45679999999864321111 1111111 3444 9999999999985
No 91
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=96.81 E-value=0.0027 Score=61.57 Aligned_cols=68 Identities=19% Similarity=0.277 Sum_probs=41.2
Q ss_pred EEEEEeecCCCCCh-HHHHHHHH---hC-------CCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHH
Q 048036 171 KIAIVGDQGLTYNT-TSTVNHMI---SN-------RPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWD 239 (472)
Q Consensus 171 ~f~v~gD~~~~~~~-~~~l~~l~---~~-------~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd 239 (472)
|++++||.|..... .+.++++. +. ..|.++++||++. .|.. ..
T Consensus 2 ~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlID------rG~~--------------------s~ 55 (234)
T cd07423 2 PFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVD------RGPD--------------------SP 55 (234)
T ss_pred CeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccC------CCCC--------------------HH
Confidence 68999999987443 22344431 11 2589999999994 2321 12
Q ss_pred HHHHhhhhhhcCCCeEEeccccccc
Q 048036 240 YWGRYMQPVLSKVPIMVVEGNHELD 264 (472)
Q Consensus 240 ~~~~~i~~l~~~~P~~~v~GNHD~~ 264 (472)
+.++.+..+...-.+..+.||||..
T Consensus 56 evl~~l~~l~~~~~~~~v~GNHE~~ 80 (234)
T cd07423 56 EVLRLVMSMVAAGAALCVPGNHDNK 80 (234)
T ss_pred HHHHHHHHHhhCCcEEEEECCcHHH
Confidence 2333333332234578999999975
No 92
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=96.78 E-value=0.0021 Score=63.98 Aligned_cols=66 Identities=24% Similarity=0.338 Sum_probs=41.7
Q ss_pred EEEEEeecCCCCChH-HHHHHHH-hCCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHhhhhh
Q 048036 171 KIAIVGDQGLTYNTT-STVNHMI-SNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDYWGRYMQPV 248 (472)
Q Consensus 171 ~f~v~gD~~~~~~~~-~~l~~l~-~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~~~~~i~~l 248 (472)
+++++||+|...... +.++++. +.+.|.++++||++. .|..+ .+.++.+..+
T Consensus 2 ~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVd------rGp~s--------------------~~vl~~l~~l 55 (275)
T PRK00166 2 ATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVN------RGPDS--------------------LEVLRFVKSL 55 (275)
T ss_pred cEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccC------CCcCH--------------------HHHHHHHHhc
Confidence 688999999764432 2334332 236899999999994 23210 1233333332
Q ss_pred hcCCCeEEeccccccc
Q 048036 249 LSKVPIMVVEGNHELD 264 (472)
Q Consensus 249 ~~~~P~~~v~GNHD~~ 264 (472)
..++.++.||||..
T Consensus 56 --~~~~~~VlGNHD~~ 69 (275)
T PRK00166 56 --GDSAVTVLGNHDLH 69 (275)
T ss_pred --CCCeEEEecChhHH
Confidence 34688999999985
No 93
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=96.76 E-value=0.0034 Score=61.47 Aligned_cols=68 Identities=24% Similarity=0.218 Sum_probs=39.5
Q ss_pred EEEEEeecCCCCChH-HHHHHHHh---------CCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHH
Q 048036 171 KIAIVGDQGLTYNTT-STVNHMIS---------NRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDY 240 (472)
Q Consensus 171 ~f~v~gD~~~~~~~~-~~l~~l~~---------~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~ 240 (472)
|+.++||+|...... +.++++.- ..-|.++++||++. .|..+ .+
T Consensus 2 ~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliD------RGp~S--------------------~~ 55 (245)
T PRK13625 2 KYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTD------RGPHS--------------------LR 55 (245)
T ss_pred ceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccC------CCcCh--------------------HH
Confidence 689999999764321 22332211 12478999999994 23211 11
Q ss_pred HHHhhhhhhcCCCeEEeccccccc
Q 048036 241 WGRYMQPVLSKVPIMVVEGNHELD 264 (472)
Q Consensus 241 ~~~~i~~l~~~~P~~~v~GNHD~~ 264 (472)
.++.+..+...-.++++.||||..
T Consensus 56 vl~~~~~~~~~~~~~~l~GNHE~~ 79 (245)
T PRK13625 56 MIEIVWELVEKKAAYYVPGNHCNK 79 (245)
T ss_pred HHHHHHHHhhCCCEEEEeCccHHH
Confidence 222222222344789999999965
No 94
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=96.74 E-value=0.015 Score=52.27 Aligned_cols=127 Identities=17% Similarity=0.185 Sum_probs=65.3
Q ss_pred EEEEEeecCCCCC----------hH----HHHHHHHh--CCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccc
Q 048036 171 KIAIVGDQGLTYN----------TT----STVNHMIS--NRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETY 234 (472)
Q Consensus 171 ~f~v~gD~~~~~~----------~~----~~l~~l~~--~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y 234 (472)
.+.++||+|.+.. .. ..+....+ ..-|.+.|+||++..- |
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~----n-------------------- 60 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGA----N-------------------- 60 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEeccccccc----c--------------------
Confidence 4667889887631 11 12233333 2458999999999521 1
Q ss_pred hHHHHHHHHhhhhhhcCCCeEEecccccccceeeccCChHHHHHHHHHHhcccCCCCCEEEEEecCCcccCCCCCCCchH
Q 048036 235 QPRWDYWGRYMQPVLSKVPIMVVEGNHELDFDIYIYITGDQYKWLEEDLVNVDREVTPWLVVTWHAPWYNTYKAHYREAE 314 (472)
Q Consensus 235 ~~~wd~~~~~i~~l~~~~P~~~v~GNHD~~F~~yid~~~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~y~~~~~~~~~~~ 314 (472)
.-......++.+... ...++||||-.=..|...-.+- .+..+...-+. -.|+++|.|.-+-.. ..+
T Consensus 61 --~~~~a~~IlerLnGr--khlv~GNhDk~~~~~~~~~~~s----vq~f~~ie~dg--~~~~LsHyP~~~~~~----~~~ 126 (186)
T COG4186 61 --RERAAGLILERLNGR--KHLVPGNHDKCHPMYRHAYFDS----VQAFQRIEWDG--EDVYLSHYPRPGQDH----PGM 126 (186)
T ss_pred --hhhHHHHHHHHcCCc--EEEeeCCCCCCcccccchhhHH----HHHHHheeECC--eEEEEEeCCCCCCCC----cch
Confidence 012233344444333 3889999996410010000011 11122221122 279999999754321 122
Q ss_pred HHHHHhhhcCceEEEeccccc
Q 048036 315 CMRVVAMEDGVDVVFNGHVHA 335 (472)
Q Consensus 315 ~~r~~~le~~VdlvlsGH~H~ 335 (472)
..|..-+..++++.+.||.|.
T Consensus 127 ~~r~~y~~~~~~llIHGH~H~ 147 (186)
T COG4186 127 ESRFDYLRLRVPLLIHGHLHS 147 (186)
T ss_pred hhhHHHHhccCCeEEeccccc
Confidence 334312233899999999999
No 95
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=96.70 E-value=0.0035 Score=61.04 Aligned_cols=81 Identities=17% Similarity=0.307 Sum_probs=45.5
Q ss_pred EEEeecCCCCCh--HHH----HHHHHhC-----CCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHHH
Q 048036 173 AIVGDQGLTYNT--TST----VNHMISN-----RPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDYW 241 (472)
Q Consensus 173 ~v~gD~~~~~~~--~~~----l~~l~~~-----~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~~ 241 (472)
++++|+|.+... ... ++.+... ++|.+|++||++...... .+... .+ ..+.....+..+
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~-~~~~~-----~~----~~~~~~~~~~~~ 71 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVY-PGQEE-----EL----EILDIYEQYEEA 71 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccC-Ccchh-----hh----hhhhHHHHHHHH
Confidence 579999976432 222 2223222 569999999999421000 00000 00 000011234556
Q ss_pred HHhhhhhhcCCCeEEecccccc
Q 048036 242 GRYMQPVLSKVPIMVVEGNHEL 263 (472)
Q Consensus 242 ~~~i~~l~~~~P~~~v~GNHD~ 263 (472)
.+.++.+...+|+++++||||.
T Consensus 72 ~~~l~~L~~~~~v~~ipGNHD~ 93 (243)
T cd07386 72 AEYLSDVPSHIKIIIIPGNHDA 93 (243)
T ss_pred HHHHHhcccCCeEEEeCCCCCc
Confidence 6677777778999999999996
No 96
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=96.64 E-value=0.0052 Score=59.42 Aligned_cols=69 Identities=14% Similarity=0.399 Sum_probs=44.0
Q ss_pred eEEEEEeecCCCCCh--------------HHHHHHHH----hCCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCc
Q 048036 170 SKIAIVGDQGLTYNT--------------TSTVNHMI----SNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIH 231 (472)
Q Consensus 170 ~~f~v~gD~~~~~~~--------------~~~l~~l~----~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~ 231 (472)
-+.++++|+|.+... .++++++. +.++|.+|++||+...... +
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~---~---------------- 75 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKK---G---------------- 75 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCC---h----------------
Confidence 367899999987421 13444443 3589999999999953110 0
Q ss_pred ccchHHHHHHHHhhhhhhcCCCeEEecccccc
Q 048036 232 ETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEL 263 (472)
Q Consensus 232 e~y~~~wd~~~~~i~~l~~~~P~~~v~GNHD~ 263 (472)
..|..+.+.++.+ ..+++.++||||.
T Consensus 76 ----~~~~~~~~~l~~~--~~~v~~V~GNHD~ 101 (225)
T TIGR00024 76 ----LEWRFIREFIEVT--FRDLILIRGNHDA 101 (225)
T ss_pred ----HHHHHHHHHHHhc--CCcEEEECCCCCC
Confidence 1233343444433 3589999999995
No 97
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=96.53 E-value=0.015 Score=69.13 Aligned_cols=47 Identities=19% Similarity=0.275 Sum_probs=30.1
Q ss_pred CCCCEEEEEecCCcccCCCCCCCchHHHHHHhhhc--CceEEEecccccee
Q 048036 289 EVTPWLVVTWHAPWYNTYKAHYREAECMRVVAMED--GVDVVFNGHVHAYE 337 (472)
Q Consensus 289 ~~~pw~Iv~~H~P~y~~~~~~~~~~~~~r~~~le~--~VdlvlsGH~H~Y~ 337 (472)
....-+|++.|...-...... ......+. +.++ +||++|.||.|...
T Consensus 233 ~gaDvII~l~H~G~~~~~~~~-~~en~~~~-la~~~~gID~Il~GHsH~~~ 281 (1163)
T PRK09419 233 GGADVIVALAHSGIESEYQSS-GAEDSVYD-LAEKTKGIDAIVAGHQHGLF 281 (1163)
T ss_pred cCCCEEEEEeccCcCCCCCCC-CcchHHHH-HHHhCCCCcEEEeCCCcccc
Confidence 345679999999875432111 11222333 4444 99999999999864
No 98
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=96.47 E-value=0.021 Score=60.05 Aligned_cols=87 Identities=15% Similarity=0.307 Sum_probs=53.6
Q ss_pred CCeEEEEEeecCCCCCh------HHHHHHHH-----hCCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchH
Q 048036 168 YPSKIAIVGDQGLTYNT------TSTVNHMI-----SNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQP 236 (472)
Q Consensus 168 ~~~~f~v~gD~~~~~~~------~~~l~~l~-----~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~ 236 (472)
..+++++++|.|.+... ...++.+. ..+...++.+||++..-+.. -|+. .+.-+.+.| .
T Consensus 224 e~v~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiY-pgq~--------~eL~i~di~-~ 293 (481)
T COG1311 224 ERVYVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIY-PGQE--------EELVIADIY-E 293 (481)
T ss_pred cceEEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccc-cCcc--------cccccccch-H
Confidence 46889999999987532 12233332 12457999999999321111 1211 122222233 2
Q ss_pred HHHHHHHhhhhhhcCCCeEEeccccccc
Q 048036 237 RWDYWGRYMQPVLSKVPIMVVEGNHELD 264 (472)
Q Consensus 237 ~wd~~~~~i~~l~~~~P~~~v~GNHD~~ 264 (472)
|++++.+++..+-..+-+++.|||||..
T Consensus 294 qy~~~A~~L~~vp~~I~v~i~PGnhDa~ 321 (481)
T COG1311 294 QYEELAEFLDQVPEHIKVFIMPGNHDAV 321 (481)
T ss_pred HHHHHHHHHhhCCCCceEEEecCCCCcc
Confidence 5666777777777778899999999975
No 99
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=96.36 E-value=0.039 Score=58.58 Aligned_cols=41 Identities=32% Similarity=0.445 Sum_probs=31.3
Q ss_pred CeEEEEEeecCCCCC---------hHHHHHHH----HhCCCCEEEEcCCccccc
Q 048036 169 PSKIAIVGDQGLTYN---------TTSTVNHM----ISNRPDLILLVGDVTYSN 209 (472)
Q Consensus 169 ~~~f~v~gD~~~~~~---------~~~~l~~l----~~~~~Dfvl~~GDl~y~d 209 (472)
.+||++..|.|.++. ...+++++ .+++.||||..||++..+
T Consensus 13 tirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeN 66 (646)
T KOG2310|consen 13 TIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHEN 66 (646)
T ss_pred ceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccC
Confidence 589999999999863 23344443 347999999999999753
No 100
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=96.35 E-value=0.0044 Score=59.51 Aligned_cols=37 Identities=27% Similarity=0.385 Sum_probs=26.4
Q ss_pred EEEEEeecCCCCCh-HHHHHHHHhC-CCCEEEEcCCccc
Q 048036 171 KIAIVGDQGLTYNT-TSTVNHMISN-RPDLILLVGDVTY 207 (472)
Q Consensus 171 ~f~v~gD~~~~~~~-~~~l~~l~~~-~~Dfvl~~GDl~y 207 (472)
|++++||.|..... .+.++++... +.|-++++||++.
T Consensus 18 ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvD 56 (218)
T PRK11439 18 HIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLID 56 (218)
T ss_pred eEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccC
Confidence 89999999986432 2334444322 5789999999994
No 101
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=96.23 E-value=0.0074 Score=58.17 Aligned_cols=67 Identities=15% Similarity=0.219 Sum_probs=39.2
Q ss_pred EEEEeecCCCCChH-HHHHHHHhC--------CCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHHHH
Q 048036 172 IAIVGDQGLTYNTT-STVNHMISN--------RPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDYWG 242 (472)
Q Consensus 172 f~v~gD~~~~~~~~-~~l~~l~~~--------~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~~~ 242 (472)
+.++||+|...... +.++++... ..|.++++||++. .|..+ .+.+
T Consensus 1 ~~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~ID------RGp~S--------------------~~vl 54 (222)
T cd07413 1 YDFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLID------RGPEI--------------------RELL 54 (222)
T ss_pred CEEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccC------CCCCH--------------------HHHH
Confidence 36899999874432 233333211 3589999999994 23210 1223
Q ss_pred HhhhhhhcCCCeEEeccccccc
Q 048036 243 RYMQPVLSKVPIMVVEGNHELD 264 (472)
Q Consensus 243 ~~i~~l~~~~P~~~v~GNHD~~ 264 (472)
+.+..+...-.++.+.||||..
T Consensus 55 ~~l~~l~~~~~~~~l~GNHE~~ 76 (222)
T cd07413 55 EIVKSMVDAGHALAVMGNHEFN 76 (222)
T ss_pred HHHHHhhcCCCEEEEEccCcHH
Confidence 3333333233688899999975
No 102
>PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes []. They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A ....
Probab=96.06 E-value=0.032 Score=43.90 Aligned_cols=76 Identities=28% Similarity=0.360 Sum_probs=46.9
Q ss_pred CCceEEEEecCCCCeeEEEEEcCCCcccCCCCCCCCCCCCcEEEEeccCCCCccEEEEEEEEEeeeeccCCccccccCcE
Q 048036 46 EPEQISVSLSSTHDSVWISWITGEFQIGNNIKPLDPKIIASVVRYATRRSQLNRKATGHSLVYNQLYPFLGLQNYTSGII 125 (472)
Q Consensus 46 ~P~qv~Lt~~~d~~s~~V~W~T~~~~~g~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~~~~~~~~ 125 (472)
+|+.+++.-. ..+++.|+|.......+ ....=.|+|....+..... ... . +...
T Consensus 2 ~P~~l~v~~~-~~~sv~v~W~~~~~~~~--------~~~~y~v~~~~~~~~~~~~------~~~----~-------~~~~ 55 (85)
T PF00041_consen 2 APENLSVSNI-SPTSVTVSWKPPSSGNG--------PITGYRVEYRSVNSTSDWQ------EVT----V-------PGNE 55 (85)
T ss_dssp SSEEEEEEEE-CSSEEEEEEEESSSTSS--------SESEEEEEEEETTSSSEEE------EEE----E-------ETTS
T ss_pred cCcCeEEEEC-CCCEEEEEEECCCCCCC--------CeeEEEEEEEecccceeee------eee----e-------eeee
Confidence 4778887776 37899999998752111 1123456666554332000 000 0 1122
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 048036 126 HHVRLTGLKPDTLYYYQCGDPS 147 (472)
Q Consensus 126 h~v~l~gL~p~t~Y~Yrv~~~~ 147 (472)
+.++|++|+|++.|.++|....
T Consensus 56 ~~~~i~~L~p~t~Y~~~v~a~~ 77 (85)
T PF00041_consen 56 TSYTITGLQPGTTYEFRVRAVN 77 (85)
T ss_dssp SEEEEESCCTTSEEEEEEEEEE
T ss_pred eeeeeccCCCCCEEEEEEEEEe
Confidence 4788899999999999998654
No 103
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=95.99 E-value=0.0078 Score=59.35 Aligned_cols=64 Identities=25% Similarity=0.307 Sum_probs=39.6
Q ss_pred EEEeecCCCCCh-HHHHHHHHh-CCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHhhhhhhc
Q 048036 173 AIVGDQGLTYNT-TSTVNHMIS-NRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDYWGRYMQPVLS 250 (472)
Q Consensus 173 ~v~gD~~~~~~~-~~~l~~l~~-~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~~~~~i~~l~~ 250 (472)
.++||+|..... .+.++++.. ...|.++++||++. .|..+ .+.++.+..+.
T Consensus 2 yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVd------RGp~s--------------------~evl~~l~~l~- 54 (257)
T cd07422 2 YAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVN------RGPDS--------------------LETLRFVKSLG- 54 (257)
T ss_pred EEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCC------CCcCH--------------------HHHHHHHHhcC-
Confidence 589999986433 233444432 25799999999994 23210 12333333332
Q ss_pred CCCeEEeccccccc
Q 048036 251 KVPIMVVEGNHELD 264 (472)
Q Consensus 251 ~~P~~~v~GNHD~~ 264 (472)
..+..+.||||..
T Consensus 55 -~~v~~VlGNHD~~ 67 (257)
T cd07422 55 -DSAKTVLGNHDLH 67 (257)
T ss_pred -CCeEEEcCCchHH
Confidence 3678999999986
No 104
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=95.98 E-value=0.061 Score=54.63 Aligned_cols=38 Identities=18% Similarity=0.139 Sum_probs=24.6
Q ss_pred eEEEEEeecCCCCC----h---HHHHHHHHhC-----CCCEEEEcCCccc
Q 048036 170 SKIAIVGDQGLTYN----T---TSTVNHMISN-----RPDLILLVGDVTY 207 (472)
Q Consensus 170 ~~f~v~gD~~~~~~----~---~~~l~~l~~~-----~~Dfvl~~GDl~y 207 (472)
++|+.+.|+|.... . ...++++++. +.-++|.+||+..
T Consensus 1 l~IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~q 50 (313)
T cd08162 1 LQLLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFI 50 (313)
T ss_pred CeEEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCcccc
Confidence 47899999987632 1 1234555432 3358999999984
No 105
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=95.83 E-value=0.012 Score=56.14 Aligned_cols=35 Identities=14% Similarity=0.208 Sum_probs=23.2
Q ss_pred EEEeecCCCCChH-HHHHHHHhCCCCEEEEcCCccc
Q 048036 173 AIVGDQGLTYNTT-STVNHMISNRPDLILLVGDVTY 207 (472)
Q Consensus 173 ~v~gD~~~~~~~~-~~l~~l~~~~~Dfvl~~GDl~y 207 (472)
.++||+|...... +.++.+.....|.+|++||++.
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vd 36 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVD 36 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeC
Confidence 3799999653321 2233333347899999999994
No 106
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=95.71 E-value=0.02 Score=57.23 Aligned_cols=37 Identities=19% Similarity=0.214 Sum_probs=25.5
Q ss_pred EEEEEeecCCCCCh-HHHHHHHHhC------CCCEEEEcCCccc
Q 048036 171 KIAIVGDQGLTYNT-TSTVNHMISN------RPDLILLVGDVTY 207 (472)
Q Consensus 171 ~f~v~gD~~~~~~~-~~~l~~l~~~------~~Dfvl~~GDl~y 207 (472)
+++++||.|..... .++++.+.+. ..+.+|++||++.
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVD 46 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCD 46 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCC
Confidence 68999999987543 2334444321 3568999999994
No 107
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=95.35 E-value=0.023 Score=56.53 Aligned_cols=37 Identities=19% Similarity=0.333 Sum_probs=26.1
Q ss_pred EEEEEeecCCCCCh-HHHHHHHH-hCCCCEEEEcCCccc
Q 048036 171 KIAIVGDQGLTYNT-TSTVNHMI-SNRPDLILLVGDVTY 207 (472)
Q Consensus 171 ~f~v~gD~~~~~~~-~~~l~~l~-~~~~Dfvl~~GDl~y 207 (472)
++.+|||+|..... .+.++++. ....|-++++||++.
T Consensus 2 ~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVd 40 (279)
T TIGR00668 2 ATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVA 40 (279)
T ss_pred cEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccC
Confidence 46799999987543 33445543 235789999999994
No 108
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=94.75 E-value=0.077 Score=51.34 Aligned_cols=72 Identities=15% Similarity=0.372 Sum_probs=44.3
Q ss_pred EEEEEeecCCCCCh--------------HH---HHHH-HHhCCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcc
Q 048036 171 KIAIVGDQGLTYNT--------------TS---TVNH-MISNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHE 232 (472)
Q Consensus 171 ~f~v~gD~~~~~~~--------------~~---~l~~-l~~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e 232 (472)
+.++++|.|.+... .. .+++ +.+.+|+-+|.+||+-.+- +..
T Consensus 21 ~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~-----~~~--------------- 80 (235)
T COG1407 21 RTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEF-----GKS--------------- 80 (235)
T ss_pred cEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCcccccc-----Ccc---------------
Confidence 78999999988532 11 2232 2346999999999998531 110
Q ss_pred cchHHHHHHHHhhhhhhcCCCeEEeccccccc
Q 048036 233 TYQPRWDYWGRYMQPVLSKVPIMVVEGNHELD 264 (472)
Q Consensus 233 ~y~~~wd~~~~~i~~l~~~~P~~~v~GNHD~~ 264 (472)
....|.....+++.+.. .-++.+.||||-+
T Consensus 81 -~~~e~~~~~~f~~~~~~-~evi~i~GNHD~~ 110 (235)
T COG1407 81 -LRQEKEEVREFLELLDE-REVIIIRGNHDNG 110 (235)
T ss_pred -ccccHHHHHHHHHHhcc-CcEEEEeccCCCc
Confidence 11234444444443332 2599999999963
No 109
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=94.48 E-value=0.8 Score=44.48 Aligned_cols=151 Identities=21% Similarity=0.322 Sum_probs=84.7
Q ss_pred eEEEEEeecCCCCChH---HHHHHHHh-CCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHhh
Q 048036 170 SKIAIVGDQGLTYNTT---STVNHMIS-NRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDYWGRYM 245 (472)
Q Consensus 170 ~~f~v~gD~~~~~~~~---~~l~~l~~-~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~~~~~i 245 (472)
+|++++||+=...... +-|..+.+ .++||+|..|-++- .|.. -.|+-+.+.+
T Consensus 1 mriLfiGDvvGk~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENaa------~G~G------------------it~k~y~~l~ 56 (266)
T COG1692 1 MRILFIGDVVGKPGRKAVKEHLPQLKSKYKIDFVIVNGENAA------GGFG------------------ITEKIYKELL 56 (266)
T ss_pred CeEEEEecccCcchHHHHHHHhHHHHHhhcCcEEEEcCcccc------CCcC------------------CCHHHHHHHH
Confidence 4899999984433222 22344443 48999999999984 2221 1234444433
Q ss_pred hhhhcCCCeEEeccccccc----cee------------------------e-c--------c-CC--------hHHHHHH
Q 048036 246 QPVLSKVPIMVVEGNHELD----FDI------------------------Y-I--------Y-IT--------GDQYKWL 279 (472)
Q Consensus 246 ~~l~~~~P~~~v~GNHD~~----F~~------------------------y-i--------d-~~--------~~Q~~WL 279 (472)
+ ..+- +++.|||=+. |+. | + + .+ ..-.+=+
T Consensus 57 ~---~G~d-viT~GNH~wd~~ei~~~i~~~~~ilRP~N~p~~~~G~G~~~f~~ng~ki~V~Nl~Grv~m~~~~d~PF~~~ 132 (266)
T COG1692 57 E---AGAD-VITLGNHTWDQKEILDFIDNADRILRPANYPDGTPGKGSRIFKINGKKLAVINLMGRVFMPPALDNPFKAA 132 (266)
T ss_pred H---hCCC-EEecccccccchHHHHHhhcccceeccCCCCCCCCcceEEEEEeCCcEEEEEEeeccccCccccCCHHHHH
Confidence 3 2333 4689999776 110 1 0 0 11 1122335
Q ss_pred HHHHhcccCCCCCEEEEEecCCcccCCCCCCCchHHHHHHhhhcCceEEEeccccceeeeeecccCccCCCCCEEEE-eC
Q 048036 280 EEDLVNVDREVTPWLVVTWHAPWYNTYKAHYREAECMRVVAMEDGVDVVFNGHVHAYERSNRVYNYTLDPCGPIHIT-VG 358 (472)
Q Consensus 280 ~~~L~~~~r~~~pw~Iv~~H~P~y~~~~~~~~~~~~~r~~~le~~VdlvlsGH~H~Y~R~~p~~~~~~~~~g~vyiv-~G 358 (472)
++.|.+.+ .+++-+||-+|.---+ +..++-- .++..|.+|+.=|+|.- ..+.++-++|+.|+. .|
T Consensus 133 d~l~~~~~-~~~~~iiVDFHAEtTS-------EK~a~g~-yldGrvsavvGTHTHV~-----TaD~rIL~~GTayiTDvG 198 (266)
T COG1692 133 DKLLDEIK-LGTDLIIVDFHAETTS-------EKNAFGW-YLDGRVSAVVGTHTHVP-----TADERILPKGTAYITDVG 198 (266)
T ss_pred HHHHHhCc-cCCceEEEEccccchh-------hhhhhhe-EEcCeEEEEEeccCccc-----cccceecCCCcEEEecCc
Confidence 55555543 3456799999974322 1122222 34448999999999973 222233468999986 55
Q ss_pred CCCC
Q 048036 359 DGGN 362 (472)
Q Consensus 359 ~gG~ 362 (472)
.-|.
T Consensus 199 MtG~ 202 (266)
T COG1692 199 MTGP 202 (266)
T ss_pred cccc
Confidence 5554
No 110
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=93.54 E-value=0.13 Score=52.34 Aligned_cols=34 Identities=18% Similarity=0.253 Sum_probs=22.6
Q ss_pred EEEEEeecCCCCChHHHHHHHHh-C----CCCEEEEcCCccc
Q 048036 171 KIAIVGDQGLTYNTTSTVNHMIS-N----RPDLILLVGDVTY 207 (472)
Q Consensus 171 ~f~v~gD~~~~~~~~~~l~~l~~-~----~~Dfvl~~GDl~y 207 (472)
+++++||+|.... .+.++.+ . ..+.+|++||++.
T Consensus 52 ~~~vvGDiHG~~~---dL~~il~~~g~~~~~~~~lFLGDyVD 90 (321)
T cd07420 52 QVTICGDLHGKLD---DLFLIFYKNGLPSPENPYVFNGDFVD 90 (321)
T ss_pred CeEEEEeCCCCHH---HHHHHHHHcCCCCccceEEEeccccC
Confidence 6899999997633 2223322 1 2367999999994
No 111
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=93.18 E-value=0.14 Score=51.84 Aligned_cols=37 Identities=16% Similarity=0.129 Sum_probs=23.5
Q ss_pred EEEEEeecCCCCChH-HHHHHHHhCCCCEEEEcCCccc
Q 048036 171 KIAIVGDQGLTYNTT-STVNHMISNRPDLILLVGDVTY 207 (472)
Q Consensus 171 ~f~v~gD~~~~~~~~-~~l~~l~~~~~Dfvl~~GDl~y 207 (472)
+++++||+|...... +.++.+.....+-++++||++.
T Consensus 44 ~i~ViGDIHG~~~dL~~l~~~~g~~~~~~ylFLGDyVD 81 (305)
T cd07416 44 PVTVCGDIHGQFYDLLKLFEVGGSPANTRYLFLGDYVD 81 (305)
T ss_pred CEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEECCccC
Confidence 588999999764321 1222211124588999999994
No 112
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=93.07 E-value=0.15 Score=50.67 Aligned_cols=37 Identities=11% Similarity=0.139 Sum_probs=24.2
Q ss_pred EEEEEeecCCCCChH-HHHHHHHhCCCCEEEEcCCccc
Q 048036 171 KIAIVGDQGLTYNTT-STVNHMISNRPDLILLVGDVTY 207 (472)
Q Consensus 171 ~f~v~gD~~~~~~~~-~~l~~l~~~~~Dfvl~~GDl~y 207 (472)
+++++||+|...... +.++.+.....+-++++||++.
T Consensus 29 ~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VD 66 (271)
T smart00156 29 PVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVD 66 (271)
T ss_pred CEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccC
Confidence 688999999763322 2222222245678999999994
No 113
>PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C.
Probab=93.00 E-value=0.96 Score=44.26 Aligned_cols=75 Identities=25% Similarity=0.355 Sum_probs=38.8
Q ss_pred HHHHHHHHhcccCCCCCEEEEEecCCcccCCCCCCCchHHHHHHhhhcCceEEEeccccceeeeeecccCccCCCCCEEE
Q 048036 276 YKWLEEDLVNVDREVTPWLVVTWHAPWYNTYKAHYREAECMRVVAMEDGVDVVFNGHVHAYERSNRVYNYTLDPCGPIHI 355 (472)
Q Consensus 276 ~~WL~~~L~~~~r~~~pw~Iv~~H~P~y~~~~~~~~~~~~~r~~~le~~VdlvlsGH~H~Y~R~~p~~~~~~~~~g~vyi 355 (472)
..-+++.|++. +.+++.+||=+|.=.- .+...|-- .|+.+|.+|+.=|+|. |..+.++-|+|+-||
T Consensus 125 F~~~d~~l~~l-~~~~~~iiVDFHAEaT-------SEK~A~g~-~lDGrvsaV~GTHTHV-----qTaDerILp~GTaYi 190 (253)
T PF13277_consen 125 FRAADRLLEEL-KEETDIIIVDFHAEAT-------SEKQAMGW-YLDGRVSAVVGTHTHV-----QTADERILPGGTAYI 190 (253)
T ss_dssp HHHHHHHHHH------SEEEEEEE-S-H-------HHHHHHHH-HHBTTBSEEEEESSSS------BS--EE-TTS-EEE
T ss_pred HHHHHHHHHhc-cccCCEEEEEeecCcH-------HHHHHHHH-HhCCcEEEEEeCCCCc-----cCchhhccCCCCEEE
Confidence 33445555543 2456789998986321 12222322 4566999999999997 222333347899999
Q ss_pred E-eCCCCCCC
Q 048036 356 T-VGDGGNRE 364 (472)
Q Consensus 356 v-~G~gG~~~ 364 (472)
+ .|.-|...
T Consensus 191 TDvGMtG~~d 200 (253)
T PF13277_consen 191 TDVGMTGPYD 200 (253)
T ss_dssp S---EBEESS
T ss_pred ecCccccCcc
Confidence 6 66666643
No 114
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=92.22 E-value=0.21 Score=50.26 Aligned_cols=37 Identities=19% Similarity=0.099 Sum_probs=23.1
Q ss_pred EEEEEeecCCCCChH-HHHHHHHhCCCCEEEEcCCccc
Q 048036 171 KIAIVGDQGLTYNTT-STVNHMISNRPDLILLVGDVTY 207 (472)
Q Consensus 171 ~f~v~gD~~~~~~~~-~~l~~l~~~~~Dfvl~~GDl~y 207 (472)
.++++||+|...... +.++.......+-+|++||++.
T Consensus 51 ~i~viGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVD 88 (293)
T cd07414 51 PLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVD 88 (293)
T ss_pred ceEEEEecCCCHHHHHHHHHhcCCCCcceEEEEeeEec
Confidence 588999999753322 2222222224567889999993
No 115
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=92.19 E-value=4.8 Score=36.23 Aligned_cols=125 Identities=17% Similarity=0.342 Sum_probs=69.0
Q ss_pred EEEEeecCCCCChH---HHHHHHH-hCCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHhhhh
Q 048036 172 IAIVGDQGLTYNTT---STVNHMI-SNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDYWGRYMQP 247 (472)
Q Consensus 172 f~v~gD~~~~~~~~---~~l~~l~-~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~~~~~i~~ 247 (472)
++++||.|...... .-++++. -.+..-|+++|.+.- .+++++++.
T Consensus 3 vL~lgD~HiP~Ra~~Lp~KFkklLvPgki~hilctGNlcs-------------------------------~e~~dylk~ 51 (183)
T KOG3325|consen 3 VLVLGDLHIPHRANDLPAKFKKLLVPGKIQHILCTGNLCS-------------------------------KESYDYLKT 51 (183)
T ss_pred EEEeccccCCccccccCHHHHhccCCCceeEEEEeCCcch-------------------------------HHHHHHHHh
Confidence 67889998764432 2334433 357788888998762 122233333
Q ss_pred hhcCCCeEEecccccccceeeccCChHHHHHHHHHHhcccCC---CCCEEEEEecCCcccCCCCCCCchHHHHHHhhhc-
Q 048036 248 VLSKVPIMVVEGNHELDFDIYIYITGDQYKWLEEDLVNVDRE---VTPWLVVTWHAPWYNTYKAHYREAECMRVVAMED- 323 (472)
Q Consensus 248 l~~~~P~~~v~GNHD~~F~~yid~~~~Q~~WL~~~L~~~~r~---~~pw~Iv~~H~P~y~~~~~~~~~~~~~r~~~le~- 323 (472)
+.. -+-.+.|.-|. . ++-...+ .-.++|=++|--..- .|++.+.+. +|.+
T Consensus 52 l~~--dvhiVrGeFD~-----------~-------~~yP~~kvvtvGqfkIG~chGhqVi----P~gd~~sL~--~LaRq 105 (183)
T KOG3325|consen 52 LSS--DVHIVRGEFDE-----------N-------LKYPENKVVTVGQFKIGLCHGHQVI----PWGDPESLA--LLARQ 105 (183)
T ss_pred hCC--CcEEEecccCc-----------c-------ccCCccceEEeccEEEEeecCcEee----cCCCHHHHH--HHHHh
Confidence 332 24567787552 1 2111101 123666666632111 123333343 3444
Q ss_pred -CceEEEeccccceeeeeecccCccCCCCCEEEEeCCCC
Q 048036 324 -GVDVVFNGHVHAYERSNRVYNYTLDPCGPIHITVGDGG 361 (472)
Q Consensus 324 -~VdlvlsGH~H~Y~R~~p~~~~~~~~~g~vyiv~G~gG 361 (472)
.||+.++||+|.++-.. -+|-.||.-|++-
T Consensus 106 ldvDILl~G~Th~f~Aye--------~eg~ffvnPGSaT 136 (183)
T KOG3325|consen 106 LDVDILLTGHTHKFEAYE--------HEGKFFVNPGSAT 136 (183)
T ss_pred cCCcEEEeCCceeEEEEE--------eCCcEEeCCCccc
Confidence 99999999999988763 3566777666653
No 116
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=92.09 E-value=0.29 Score=50.81 Aligned_cols=34 Identities=18% Similarity=0.282 Sum_probs=22.2
Q ss_pred EEEEEeecCCCCChHHHHHHHHh---C-CC-CEEEEcCCccc
Q 048036 171 KIAIVGDQGLTYNTTSTVNHMIS---N-RP-DLILLVGDVTY 207 (472)
Q Consensus 171 ~f~v~gD~~~~~~~~~~l~~l~~---~-~~-Dfvl~~GDl~y 207 (472)
++.++||+|.... .+..+.+ . .. +.+|++||++.
T Consensus 67 ~i~VvGDIHG~~~---dL~~ll~~~g~~~~~~~ylFLGDyVD 105 (377)
T cd07418 67 EVVVVGDVHGQLH---DVLFLLEDAGFPDQNRFYVFNGDYVD 105 (377)
T ss_pred CEEEEEecCCCHH---HHHHHHHHhCCCCCCceEEEeccccC
Confidence 5899999997643 2223332 1 22 46899999993
No 117
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=92.08 E-value=0.2 Score=50.15 Aligned_cols=37 Identities=14% Similarity=0.101 Sum_probs=22.8
Q ss_pred EEEEEeecCCCCChH-HHHHHHHhCCCCEEEEcCCccc
Q 048036 171 KIAIVGDQGLTYNTT-STVNHMISNRPDLILLVGDVTY 207 (472)
Q Consensus 171 ~f~v~gD~~~~~~~~-~~l~~l~~~~~Dfvl~~GDl~y 207 (472)
.+.++||.|...... ..++.......+-+|++||++.
T Consensus 43 ~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~lfLGDyVD 80 (285)
T cd07415 43 PVTVCGDIHGQFYDLLELFRVGGDPPDTNYLFLGDYVD 80 (285)
T ss_pred CEEEEEeCCCCHHHHHHHHHHcCCCCCCeEEEEeEECC
Confidence 488999999653321 1222221124567899999994
No 118
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=91.61 E-value=0.27 Score=49.73 Aligned_cols=37 Identities=11% Similarity=0.117 Sum_probs=23.1
Q ss_pred EEEEEeecCCCCChH-HHHHHHHhCCCCEEEEcCCccc
Q 048036 171 KIAIVGDQGLTYNTT-STVNHMISNRPDLILLVGDVTY 207 (472)
Q Consensus 171 ~f~v~gD~~~~~~~~-~~l~~l~~~~~Dfvl~~GDl~y 207 (472)
.+.++||+|...... +.++.+.....+-+|++||++.
T Consensus 44 ~i~vvGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVD 81 (303)
T PTZ00239 44 PVNVCGDIHGQFYDLQALFKEGGDIPNANYIFIGDFVD 81 (303)
T ss_pred CEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEeeeEcC
Confidence 478999999753322 1222222234567899999994
No 119
>TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes.
Probab=91.24 E-value=0.53 Score=49.88 Aligned_cols=17 Identities=29% Similarity=0.364 Sum_probs=14.0
Q ss_pred hhcCCCeEEeccccccc
Q 048036 248 VLSKVPIMVVEGNHELD 264 (472)
Q Consensus 248 l~~~~P~~~v~GNHD~~ 264 (472)
+...+|||.+.||||..
T Consensus 154 L~~~iPWY~v~GNHD~~ 170 (492)
T TIGR03768 154 LDKSIPWYQVLGNHDHF 170 (492)
T ss_pred cCCCCceEEeecCCccc
Confidence 34459999999999975
No 120
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=90.74 E-value=0.37 Score=49.04 Aligned_cols=37 Identities=19% Similarity=0.095 Sum_probs=22.5
Q ss_pred EEEEEeecCCCCChH-HHHHHHHhCCCCEEEEcCCccc
Q 048036 171 KIAIVGDQGLTYNTT-STVNHMISNRPDLILLVGDVTY 207 (472)
Q Consensus 171 ~f~v~gD~~~~~~~~-~~l~~l~~~~~Dfvl~~GDl~y 207 (472)
+++++||+|...... +.++.......+-.|++||++.
T Consensus 60 ~i~vvGDIHG~~~dL~~l~~~~g~~~~~~ylfLGDyVD 97 (320)
T PTZ00480 60 PLKICGDVHGQYFDLLRLFEYGGYPPESNYLFLGDYVD 97 (320)
T ss_pred CeEEEeecccCHHHHHHHHHhcCCCCcceEEEeceecC
Confidence 588999999653221 1222211124467889999994
No 121
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=90.48 E-value=0.52 Score=46.05 Aligned_cols=63 Identities=16% Similarity=0.236 Sum_probs=40.2
Q ss_pred HHHHHHHHHhcccCCCCCEEEEEecCCcccCCCCCCCchHHHHHHhhhcCceEEEeccccceeee
Q 048036 275 QYKWLEEDLVNVDREVTPWLVVTWHAPWYNTYKAHYREAECMRVVAMEDGVDVVFNGHVHAYERS 339 (472)
Q Consensus 275 Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~y~~~~~~~~~~~~~r~~~le~~VdlvlsGH~H~Y~R~ 339 (472)
+.+.+.+++++++ +...++||+.|--.-..........+..+. +++.|+|+|+.+|.|..+-.
T Consensus 169 ~~~~i~~~i~~~r-~~~D~vIv~~HwG~e~~~~p~~~q~~~a~~-lidaGaDiIiG~HpHv~q~~ 231 (250)
T PF09587_consen 169 GIERIKEDIREAR-KKADVVIVSLHWGIEYENYPTPEQRELARA-LIDAGADIIIGHHPHVIQPV 231 (250)
T ss_pred hHHHHHHHHHHHh-cCCCEEEEEeccCCCCCCCCCHHHHHHHHH-HHHcCCCEEEeCCCCcccce
Confidence 4477888888775 457789999998532211111111122333 55669999999999986544
No 122
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=89.92 E-value=2.2 Score=47.98 Aligned_cols=99 Identities=29% Similarity=0.440 Sum_probs=58.6
Q ss_pred cccccCCCCCceEE-EEecC-CCCeeEEEEEcCCCcccCCCCCCCCCCCCcEEEEeccCCCCccEEEEEEEEEeeeeccC
Q 048036 38 VQRTVEGFEPEQIS-VSLSS-THDSVWISWITGEFQIGNNIKPLDPKIIASVVRYATRRSQLNRKATGHSLVYNQLYPFL 115 (472)
Q Consensus 38 ~~~~~~~~~P~qv~-Lt~~~-d~~s~~V~W~T~~~~~g~~~~~~~~~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~~~~ 115 (472)
|..+++...|..|. |-... .+++++++|.-.+...|. ...=.|+|-.+..+- ..|+..
T Consensus 434 vnItt~qa~ps~V~~~r~~~~~~~sitlsW~~p~~png~--------ildYEvky~ek~~~e--------~~~~~~---- 493 (996)
T KOG0196|consen 434 VNITTNQAAPSPVSVLRQVSRTSDSITLSWSEPDQPNGV--------ILDYEVKYYEKDEDE--------RSYSTL---- 493 (996)
T ss_pred EEeeccccCCCccceEEEeeeccCceEEecCCCCCCCCc--------ceeEEEEEeeccccc--------cceeEE----
Confidence 44445555666642 22222 368999999876653221 112345554432110 111110
Q ss_pred CccccccCcEEEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCCC
Q 048036 116 GLQNYTSGIIHHVRLTGLKPDTLYYYQCGDPSI---PAMSGTYYFRTMPD 162 (472)
Q Consensus 116 g~~~~~~~~~h~v~l~gL~p~t~Y~Yrv~~~~~---~~~S~~~~F~T~p~ 162 (472)
..-..+|+|+||+|||.|-+||..... +..|....|.|.+.
T Consensus 494 ------~t~~~~~ti~gL~p~t~YvfqVRarT~aG~G~~S~~~~fqT~~~ 537 (996)
T KOG0196|consen 494 ------KTKTTTATITGLKPGTVYVFQVRARTAAGYGPYSGKHEFQTLPS 537 (996)
T ss_pred ------ecccceEEeeccCCCcEEEEEEEEecccCCCCCCCceeeeecCc
Confidence 112468999999999999999986542 36789999999876
No 123
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain. CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal
Probab=89.87 E-value=0.54 Score=45.54 Aligned_cols=60 Identities=18% Similarity=0.318 Sum_probs=34.3
Q ss_pred HHHHHHHhcccCCCCCEEEEEecCCcccCCCCCCCchHHHHHHhhhcCceEEEeccccceee
Q 048036 277 KWLEEDLVNVDREVTPWLVVTWHAPWYNTYKAHYREAECMRVVAMEDGVDVVFNGHVHAYER 338 (472)
Q Consensus 277 ~WL~~~L~~~~r~~~pw~Iv~~H~P~y~~~~~~~~~~~~~r~~~le~~VdlvlsGH~H~Y~R 338 (472)
+-+++.++++.+ +...+||+.|-..-..........+..+. +++.++|+++.||.|..+-
T Consensus 162 ~~~~~~i~~lr~-~~D~vIv~~H~G~e~~~~p~~~~~~la~~-l~~~G~D~IiG~H~Hv~q~ 221 (239)
T cd07381 162 ERIAADIAEAKK-KADIVIVSLHWGVEYSYYPTPEQRELARA-LIDAGADLVIGHHPHVLQG 221 (239)
T ss_pred HHHHHHHHHHhh-cCCEEEEEecCcccCCCCCCHHHHHHHHH-HHHCCCCEEEcCCCCcCCC
Confidence 335555555432 36789999997543221110001111223 4456999999999998653
No 124
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=89.70 E-value=0.69 Score=46.98 Aligned_cols=12 Identities=42% Similarity=0.653 Sum_probs=10.2
Q ss_pred CeEEeccccccc
Q 048036 253 PIMVVEGNHELD 264 (472)
Q Consensus 253 P~~~v~GNHD~~ 264 (472)
-++.+.||||..
T Consensus 116 ~v~lLRGNHE~~ 127 (311)
T cd07419 116 QIHLIRGNHEDR 127 (311)
T ss_pred cEEEeccccchH
Confidence 478899999975
No 125
>cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Probab=89.60 E-value=3.7 Score=31.28 Aligned_cols=23 Identities=35% Similarity=0.475 Sum_probs=19.4
Q ss_pred EEEEEeCCCCCCCEEEEEEecCC
Q 048036 125 IHHVRLTGLKPDTLYYYQCGDPS 147 (472)
Q Consensus 125 ~h~v~l~gL~p~t~Y~Yrv~~~~ 147 (472)
..++.|.+|.|++.|.++|....
T Consensus 56 ~~~~~i~~l~p~~~Y~~~v~a~~ 78 (93)
T cd00063 56 ETSYTLTGLKPGTEYEFRVRAVN 78 (93)
T ss_pred ccEEEEccccCCCEEEEEEEEEC
Confidence 46788899999999999997643
No 126
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=89.47 E-value=0.61 Score=47.45 Aligned_cols=34 Identities=24% Similarity=0.390 Sum_probs=22.4
Q ss_pred EEEEEeecCCCCChHHHHHHHHh-C----CCCEEEEcCCccc
Q 048036 171 KIAIVGDQGLTYNTTSTVNHMIS-N----RPDLILLVGDVTY 207 (472)
Q Consensus 171 ~f~v~gD~~~~~~~~~~l~~l~~-~----~~Dfvl~~GDl~y 207 (472)
++.++||+|.... .+.++.+ . .-|-+|++||++.
T Consensus 61 ~~~VvGDIHG~~~---dL~~ll~~~g~~~~~~~ylFLGDyVD 99 (316)
T cd07417 61 KITVCGDTHGQFY---DLLNIFELNGLPSETNPYLFNGDFVD 99 (316)
T ss_pred eeEEeecccCCHH---HHHHHHHhcCCCCccCeEEEEeeEec
Confidence 6899999997532 2222322 2 2257999999994
No 127
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=89.44 E-value=0.55 Score=45.57 Aligned_cols=59 Identities=19% Similarity=0.277 Sum_probs=33.8
Q ss_pred HHHHHhcccCCCCCEEEEEecCCcccCCCCCCCchHHHHHHhhhcCceEEEeccccceeee
Q 048036 279 LEEDLVNVDREVTPWLVVTWHAPWYNTYKAHYREAECMRVVAMEDGVDVVFNGHVHAYERS 339 (472)
Q Consensus 279 L~~~L~~~~r~~~pw~Iv~~H~P~y~~~~~~~~~~~~~r~~~le~~VdlvlsGH~H~Y~R~ 339 (472)
+++.++++. ++...+||+.|--.-..........+..+. +++.++|+++.||.|..+..
T Consensus 162 i~~~i~~lr-~~~D~vIv~~H~G~e~~~~p~~~~~~~A~~-l~~~G~DvIiG~H~H~~~~~ 220 (239)
T smart00854 162 ILADIARAR-KKADVVIVSLHWGVEYQYEPTDEQRELAHA-LIDAGADVVIGHHPHVLQPI 220 (239)
T ss_pred HHHHHHHHh-ccCCEEEEEecCccccCCCCCHHHHHHHHH-HHHcCCCEEEcCCCCcCCce
Confidence 334444432 246789999998653221110011112233 44569999999999987643
No 128
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=89.40 E-value=0.42 Score=48.11 Aligned_cols=36 Identities=17% Similarity=0.149 Sum_probs=22.0
Q ss_pred EEEEeecCCCCChH-HHHHHHHhCCCCEEEEcCCccc
Q 048036 172 IAIVGDQGLTYNTT-STVNHMISNRPDLILLVGDVTY 207 (472)
Q Consensus 172 f~v~gD~~~~~~~~-~~l~~l~~~~~Dfvl~~GDl~y 207 (472)
+.++||.|...... +.++.+.....+-++++||++.
T Consensus 54 ~~ViGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVD 90 (294)
T PTZ00244 54 VRVCGDTHGQYYDLLRIFEKCGFPPYSNYLFLGDYVD 90 (294)
T ss_pred ceeeccCCCCHHHHHHHHHHcCCCCcccEEEeeeEec
Confidence 67899999764322 2233222223456889999994
No 129
>KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism]
Probab=87.72 E-value=1.3 Score=48.05 Aligned_cols=54 Identities=17% Similarity=0.300 Sum_probs=34.0
Q ss_pred hHHHHHHHHHHhcccCCCCCEEEEEecCCcccCCCCCCCchHHHHHHhhhc---CceE-EEeccccc
Q 048036 273 GDQYKWLEEDLVNVDREVTPWLVVTWHAPWYNTYKAHYREAECMRVVAMED---GVDV-VFNGHVHA 335 (472)
Q Consensus 273 ~~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~y~~~~~~~~~~~~~r~~~le~---~Vdl-vlsGH~H~ 335 (472)
-.|.+|-.+.++. ....-+|+++|.|.-... +.+.+.. .+.+ ++++ ||-||.|.
T Consensus 211 i~~~~~~~~m~~~---~~idlii~lgH~~~~~~~-----e~~~~~~-~ir~~~p~t~IqviGGHshi 268 (602)
T KOG4419|consen 211 ITQSEWEQDMVNT---TDIDLIIALGHSPVRDDD-----EWKSLHA-EIRKVHPNTPIQVIGGHSHI 268 (602)
T ss_pred HhccchHHHHhhc---cCccEEEEecccccccch-----hhhhHHH-HHhhhCCCCceEEECchhhh
Confidence 3567777777766 344568999999974321 1111221 2222 7888 99999997
No 130
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=86.78 E-value=1.1 Score=44.29 Aligned_cols=33 Identities=15% Similarity=0.190 Sum_probs=23.7
Q ss_pred CeEEEEEeecCCCCChHHHHHHHHh-CCCCEEEEcCCccc
Q 048036 169 PSKIAIVGDQGLTYNTTSTVNHMIS-NRPDLILLVGDVTY 207 (472)
Q Consensus 169 ~~~f~v~gD~~~~~~~~~~l~~l~~-~~~Dfvl~~GDl~y 207 (472)
-.||+.++|.|..... +.. -.-|++||+||...
T Consensus 61 ~~r~VcisdtH~~~~~------i~~~p~gDvlihagdfT~ 94 (305)
T KOG3947|consen 61 YARFVCISDTHELTFD------INDIPDGDVLIHAGDFTN 94 (305)
T ss_pred ceEEEEecCcccccCc------cccCCCCceEEeccCCcc
Confidence 4699999999865321 121 25689999999983
No 131
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=83.94 E-value=1.7 Score=44.51 Aligned_cols=83 Identities=20% Similarity=0.295 Sum_probs=50.1
Q ss_pred eEEEEEeecCCCCC-hHHHHHHHHhC---CCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHhh
Q 048036 170 SKIAIVGDQGLTYN-TTSTVNHMISN---RPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQPRWDYWGRYM 245 (472)
Q Consensus 170 ~~f~v~gD~~~~~~-~~~~l~~l~~~---~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~~wd~~~~~i 245 (472)
+|++|-|.+|..-+ -.+++..+.+. +.|++|+.||+---. |+.+..+ -.+..-|+.. ..|.+..
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavR----n~~D~~s-------iavPpKy~~m-~~F~~YY 68 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVR----NEQDLKS-------IAVPPKYRRM-GDFYKYY 68 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhc----chhhccc-------ccCCHHHHHH-HHHHHHh
Confidence 47899999986533 23455666554 899999999985321 2222111 0122234433 3344433
Q ss_pred -hhhhcCCCeEEeccccccc
Q 048036 246 -QPVLSKVPIMVVEGNHELD 264 (472)
Q Consensus 246 -~~l~~~~P~~~v~GNHD~~ 264 (472)
..+.+.+|.+++=||||..
T Consensus 69 sge~~APVlTIFIGGNHEAs 88 (456)
T KOG2863|consen 69 SGEIKAPVLTIFIGGNHEAS 88 (456)
T ss_pred CCcccCceeEEEecCchHHH
Confidence 2456678899999999976
No 132
>KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms]
Probab=83.41 E-value=2.8 Score=48.98 Aligned_cols=90 Identities=19% Similarity=0.261 Sum_probs=51.0
Q ss_pred CCCCCceEEEEecCCCCeeEEEEEcCCCcccCCCCCCCCCCCCcE----EEEeccCCCCccEEEEEEEEEeeeeccCCcc
Q 048036 43 EGFEPEQISVSLSSTHDSVWISWITGEFQIGNNIKPLDPKIIASV----VRYATRRSQLNRKATGHSLVYNQLYPFLGLQ 118 (472)
Q Consensus 43 ~~~~P~qv~Lt~~~d~~s~~V~W~T~~~~~g~~~~~~~~~~~~~~----V~yg~~~~~~~~~~~g~~~~y~~~~~~~g~~ 118 (472)
++..|+.|.|-..+ .++++|+|.+..... ..... ++|++.+...... . +. ..|
T Consensus 615 PsaPP~Nl~lev~s-StsVrVsW~pP~~~t----------~ng~itgYkIRy~~~~~~~~~~----~-t~-----v~~-- 671 (1381)
T KOG4221|consen 615 PSAPPQNLSLEVVS-STSVRVSWLPPPSET----------QNGQITGYKIRYRKLSREDEVN----E-TV-----VKG-- 671 (1381)
T ss_pred CCCCCcceEEEecC-CCeEEEEccCCCccc----------ccceEEEEEEEecccCcccccc----e-ee-----ccc--
Confidence 45556668877765 789999998865421 01122 2334332211100 0 00 011
Q ss_pred ccccCcEEEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcC
Q 048036 119 NYTSGIIHHVRLTGLKPDTLYYYQCGDPSI---PAMSGTYYFRTM 160 (472)
Q Consensus 119 ~~~~~~~h~v~l~gL~p~t~Y~Yrv~~~~~---~~~S~~~~F~T~ 160 (472)
....-.+.+|+|+|.|.+||..... +..|++.+|.|+
T Consensus 672 -----n~~~~l~~~Lep~T~Y~vrIsa~t~nGtGpaS~w~~aeT~ 711 (1381)
T KOG4221|consen 672 -----NTTQYLFNGLEPNTQYRVRISAMTVNGTGPASEWVSAETP 711 (1381)
T ss_pred -----chhhhHhhcCCCCceEEEEEEEeccCCCCCcccceeccCc
Confidence 1122245789999999999975432 357889999885
No 133
>smart00060 FN3 Fibronectin type 3 domain. One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Probab=82.96 E-value=9.5 Score=27.89 Aligned_cols=22 Identities=36% Similarity=0.496 Sum_probs=19.2
Q ss_pred EEEEEeCCCCCCCEEEEEEecC
Q 048036 125 IHHVRLTGLKPDTLYYYQCGDP 146 (472)
Q Consensus 125 ~h~v~l~gL~p~t~Y~Yrv~~~ 146 (472)
-+...|.+|+|++.|.++|..-
T Consensus 56 ~~~~~i~~L~~~~~Y~v~v~a~ 77 (83)
T smart00060 56 STSYTLTGLKPGTEYEFRVRAV 77 (83)
T ss_pred ccEEEEeCcCCCCEEEEEEEEE
Confidence 4788999999999999999754
No 134
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=82.83 E-value=3.5 Score=40.70 Aligned_cols=28 Identities=14% Similarity=0.318 Sum_probs=22.9
Q ss_pred HHHHHHHhhhhhhcCCCeEEeccccccc
Q 048036 237 RWDYWGRYMQPVLSKVPIMVVEGNHELD 264 (472)
Q Consensus 237 ~wd~~~~~i~~l~~~~P~~~v~GNHD~~ 264 (472)
+.+++.+++..+...+|+.+.|||||-.
T Consensus 80 ~~~~ld~~l~~l~~~i~V~imPG~~Dp~ 107 (257)
T cd07387 80 AVKELDNFLSQLASSVPVDLMPGEFDPA 107 (257)
T ss_pred HHHHHHHHHHhhhcCCeEEECCCCCCcc
Confidence 4566667777788899999999999975
No 135
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=72.68 E-value=3 Score=39.24 Aligned_cols=81 Identities=14% Similarity=0.325 Sum_probs=41.0
Q ss_pred EEEEeecCCCCCh--HHHHHHHH-----hCCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchH---HHHHH
Q 048036 172 IAIVGDQGLTYNT--TSTVNHMI-----SNRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQP---RWDYW 241 (472)
Q Consensus 172 f~v~gD~~~~~~~--~~~l~~l~-----~~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~---~wd~~ 241 (472)
|++++|.+.+.+. .+.++++. +.+|+.+|++|+++........... ..+.+.. .-..+
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~------------~~~~~~~~~~~~~~~ 68 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGS------------VPDSYSFEEDFLKEL 68 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---------------HHCCHHHHHHHHC
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCcccccccccc------------ccccccccHHHHHHH
Confidence 5788998877432 33444443 4579999999999953221100000 0001111 11222
Q ss_pred HHhhhhhhcCCCeEEeccccccc
Q 048036 242 GRYMQPVLSKVPIMVVEGNHELD 264 (472)
Q Consensus 242 ~~~i~~l~~~~P~~~v~GNHD~~ 264 (472)
.+.+..+...+.++.+||+||..
T Consensus 69 ~~~~~~i~~~~~vvlvPg~~D~~ 91 (209)
T PF04042_consen 69 DSFLESILPSTQVVLVPGPNDPT 91 (209)
T ss_dssp HHHHCCCHCCSEEEEE--TTCTT
T ss_pred HHHHhhcccccEEEEeCCCcccc
Confidence 33445566788999999999975
No 136
>KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms]
Probab=58.19 E-value=94 Score=37.11 Aligned_cols=37 Identities=19% Similarity=0.148 Sum_probs=28.5
Q ss_pred EEEEEeCCCCCCCEEEEEEecCCC---CCccceeEEEcCC
Q 048036 125 IHHVRLTGLKPDTLYYYQCGDPSI---PAMSGTYYFRTMP 161 (472)
Q Consensus 125 ~h~v~l~gL~p~t~Y~Yrv~~~~~---~~~S~~~~F~T~p 161 (472)
.++.+|+||+|.|.|.|||...+. +..|...+|+|+.
T Consensus 573 ~~e~ti~gL~k~TeY~~~vvA~N~~G~g~sS~~i~V~Tls 612 (1381)
T KOG4221|consen 573 ATEYTINGLEKYTEYSIRVVAYNSAGSGVSSADITVRTLS 612 (1381)
T ss_pred ccEEEeecCCCccceEEEEEEecCCCCCCCCCceEEEecc
Confidence 477889999999999999986542 2456777888853
No 137
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=56.48 E-value=67 Score=32.30 Aligned_cols=79 Identities=15% Similarity=0.207 Sum_probs=47.2
Q ss_pred CeEEEEEeecCCCCChHHHHHHHH---h---------CCCCEEEEcCCcccccccccCCCCCCccccCCCCCCCcccchH
Q 048036 169 PSKIAIVGDQGLTYNTTSTVNHMI---S---------NRPDLILLVGDVTYSNLYLTNGTGSNCYSCSFANSPIHETYQP 236 (472)
Q Consensus 169 ~~~f~v~gD~~~~~~~~~~l~~l~---~---------~~~Dfvl~~GDl~y~d~~~~~G~~~~~~~~~~~~~~~~e~y~~ 236 (472)
..+|+++||.+... .+++++|. + ..|-.+|+.|+++..--. .+. ...+.|..
T Consensus 27 ~~~~VilSDV~LD~--p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~--~~~------------~~~~~yk~ 90 (291)
T PTZ00235 27 RHNWIIMHDVYLDS--PYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFD--YNR------------NFHKVYIK 90 (291)
T ss_pred ceEEEEEEeeccCC--HHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCccc--CCC------------CchHHHHH
Confidence 46899999999863 33333332 2 128899999999853110 010 01223444
Q ss_pred HHHHHHHh-h---hhhhcCCCeEEecccccc
Q 048036 237 RWDYWGRY-M---QPVLSKVPIMVVEGNHEL 263 (472)
Q Consensus 237 ~wd~~~~~-i---~~l~~~~P~~~v~GNHD~ 263 (472)
..+.+... + ..+..+.-++.|||-.|-
T Consensus 91 ~Fd~La~llls~fp~L~~~s~fVFVPGpnDP 121 (291)
T PTZ00235 91 GFEKLSVMLISKFKLILEHCYLIFIPGINDP 121 (291)
T ss_pred HHHHHHHHHHHhChHHHhcCeEEEECCCCCC
Confidence 45555432 2 234567789999999996
No 138
>COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion]
Probab=49.14 E-value=27 Score=34.90 Aligned_cols=29 Identities=24% Similarity=0.508 Sum_probs=20.1
Q ss_pred HHHHHHHHHHhcccCCCCCEEEEEecCCcc
Q 048036 274 DQYKWLEEDLVNVDREVTPWLVVTWHAPWY 303 (472)
Q Consensus 274 ~Q~~WL~~~L~~~~r~~~pw~Iv~~H~P~y 303 (472)
.-+-||+.+|........| ++++.|.-+-
T Consensus 253 sslpwlk~dl~~~aadgrp-v~LfqhyGwd 281 (392)
T COG5555 253 SSLPWLKVDLIYSAADGRP-VYLFQHYGWD 281 (392)
T ss_pred ccCcceeccceeeccCCCc-eeehhhhCcc
Confidence 4467999999865434445 7888887543
No 139
>KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms]
Probab=48.05 E-value=88 Score=36.86 Aligned_cols=24 Identities=33% Similarity=0.437 Sum_probs=20.1
Q ss_pred cEEEEEeCCCCCCCEEEEEEecCC
Q 048036 124 IIHHVRLTGLKPDTLYYYQCGDPS 147 (472)
Q Consensus 124 ~~h~v~l~gL~p~t~Y~Yrv~~~~ 147 (472)
-.-.++|+||+|+|.|++.|..-+
T Consensus 875 ~~~~~~ltgL~~~T~Y~~~vrA~n 898 (1051)
T KOG3513|consen 875 NRTSWRLTGLEPNTKYRFYVRAYT 898 (1051)
T ss_pred CcceEeeeCCCCCceEEEEEEEec
Confidence 456789999999999999987643
No 140
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=47.67 E-value=23 Score=34.95 Aligned_cols=34 Identities=21% Similarity=0.353 Sum_probs=20.8
Q ss_pred EEEEeecCCCCChHHHHHHH--HhCCCC-EEEEcCCccc
Q 048036 172 IAIVGDQGLTYNTTSTVNHM--ISNRPD-LILLVGDVTY 207 (472)
Q Consensus 172 f~v~gD~~~~~~~~~~l~~l--~~~~~D-fvl~~GDl~y 207 (472)
+.+.||.|.... ..++.+ -...|| =.|+.||.+.
T Consensus 62 vtvcGDvHGqf~--dl~ELfkiGG~~pdtnylfmGDyvd 98 (319)
T KOG0371|consen 62 VTVCGDVHGQFH--DLIELFKIGGLAPDTNYLFMGDYVD 98 (319)
T ss_pred eEEecCcchhHH--HHHHHHHccCCCCCcceeeeeeecc
Confidence 568999986532 233322 223455 4578999994
No 141
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=45.16 E-value=32 Score=33.75 Aligned_cols=33 Identities=15% Similarity=0.319 Sum_probs=19.6
Q ss_pred EEEEeecCCCCChHHHHHHHHh---C-CCCEEEEcCCccc
Q 048036 172 IAIVGDQGLTYNTTSTVNHMIS---N-RPDLILLVGDVTY 207 (472)
Q Consensus 172 f~v~gD~~~~~~~~~~l~~l~~---~-~~Dfvl~~GDl~y 207 (472)
+.+.||+|... ...++ |.+ . .-.=-|++||++.
T Consensus 45 vtvcGDIHGQf--~Dlle-lf~igG~~~~t~YLFLGDyVD 81 (303)
T KOG0372|consen 45 VTVCGDIHGQF--YDLLE-LFRIGGDVPETNYLFLGDYVD 81 (303)
T ss_pred cEEeecccchH--HHHHH-HHHhCCCCCCCceEeecchhc
Confidence 55899998652 22222 222 1 2235688999994
No 142
>KOG4258 consensus Insulin/growth factor receptor (contains protein kinase domain) [Signal transduction mechanisms]
Probab=44.43 E-value=91 Score=35.81 Aligned_cols=123 Identities=23% Similarity=0.229 Sum_probs=70.1
Q ss_pred CCCceEEEEecCC-CCeeEEEEEcCCCcccCCCCCCCCCCCCcEEEEeccCCCCc-----cEEEEEE-EEEeeeeccCCc
Q 048036 45 FEPEQISVSLSST-HDSVWISWITGEFQIGNNIKPLDPKIIASVVRYATRRSQLN-----RKATGHS-LVYNQLYPFLGL 117 (472)
Q Consensus 45 ~~P~qv~Lt~~~d-~~s~~V~W~T~~~~~g~~~~~~~~~~~~~~V~yg~~~~~~~-----~~~~g~~-~~y~~~~~~~g~ 117 (472)
..+.-++|+.+.. .+++.++|..-.+. +.. .-..-.+.|...+.... ..+-|+. ......++-++.
T Consensus 487 Ce~~~l~~~~~~~~~dsi~lrW~~~~~~-d~r------~llg~~~~yKEaP~qNvT~~dg~~aCg~~~W~~~~v~~~~~~ 559 (1025)
T KOG4258|consen 487 CEDLVLQFSSTVTSADSILLRWERYQPP-DMR------DLLGFLLHYKEAPFQNVTEEDGRDACGSNSWNVVDVDPPDLI 559 (1025)
T ss_pred cccceeeeeeEEeecceeEEEecccCCc-chh------hhheeeEeeccCCccccceecCccccccCcceEEeccCCcCC
Confidence 4677778877754 58999999887652 100 01124566766663211 1121221 111111112222
Q ss_pred cccccCcEEEEEeCCCCCCCEEEEEEecCC-------CCCccceeEEEcCCCCCCCCCCeEEEEEeec
Q 048036 118 QNYTSGIIHHVRLTGLKPDTLYYYQCGDPS-------IPAMSGTYYFRTMPDSSPTSYPSKIAIVGDQ 178 (472)
Q Consensus 118 ~~~~~~~~h~v~l~gL~p~t~Y~Yrv~~~~-------~~~~S~~~~F~T~p~~~~~~~~~~f~v~gD~ 178 (472)
.+ .+......|.||+|.|.|.|-|..-. ..+.|+..-|+|.|.... -|+.++.-++.
T Consensus 560 p~--~~~~~~~~l~~LkP~TqYAvfVkT~t~t~~~~~~~A~S~I~YvqT~~~~Ps--pPl~~ls~sns 623 (1025)
T KOG4258|consen 560 PN--DGTHPGFLLDGLKPWTQYAVFVKTLTVTEAHEAYEAKSKIGYVQTLPDIPS--PPLDVLSKSNS 623 (1025)
T ss_pred Cc--cccccceehhcCCccceeEEEEeeeehhhhccccccccceEEEEecCCCCC--CcchhhhccCc
Confidence 21 12333789999999999999886431 126799999999886543 25666665554
No 143
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=42.81 E-value=24 Score=36.20 Aligned_cols=34 Identities=21% Similarity=0.277 Sum_probs=21.5
Q ss_pred EEEEeecCCCCChHHHHHHHHh---CCC-CEEEEcCCccc
Q 048036 172 IAIVGDQGLTYNTTSTVNHMIS---NRP-DLILLVGDVTY 207 (472)
Q Consensus 172 f~v~gD~~~~~~~~~~l~~l~~---~~~-Dfvl~~GDl~y 207 (472)
+.++||.|.... ..++-+.. ..| .-.+++||++.
T Consensus 61 V~i~GDiHGq~~--DLlrlf~~~g~~pp~~~ylFLGDYVD 98 (331)
T KOG0374|consen 61 VKIVGDIHGQFG--DLLRLFDLLGSFPPDQNYVFLGDYVD 98 (331)
T ss_pred EEEEccCcCCHH--HHHHHHHhcCCCCCcccEEEeccccc
Confidence 668999997643 33332222 224 46789999994
No 144
>PF07353 Uroplakin_II: Uroplakin II; InterPro: IPR009952 This family contains uroplakin II, which is approximately 180 residues long and seems to be restricted to mammals. Uroplakin II is an integral membrane protein, and is one of the components of the apical plaques of mammalian urothelium formed by the asymmetric unit membrane - this is believed to play a role in strengthening the urothelial apical surface to prevent the cells from rupturing during bladder distension [].; GO: 0016044 cellular membrane organization, 0030176 integral to endoplasmic reticulum membrane
Probab=38.01 E-value=36 Score=30.99 Aligned_cols=39 Identities=21% Similarity=0.306 Sum_probs=22.3
Q ss_pred EEEEEeCCCCCCCEEEEEE--ecCCCCCccceeEEEcCCCC
Q 048036 125 IHHVRLTGLKPDTLYYYQC--GDPSIPAMSGTYYFRTMPDS 163 (472)
Q Consensus 125 ~h~v~l~gL~p~t~Y~Yrv--~~~~~~~~S~~~~F~T~p~~ 163 (472)
...=.+++|.|||.|+.+. ..+.....|.+..-.|.|..
T Consensus 101 lsaYqVtNL~pGTkY~isY~VtkgtstESS~~i~msT~n~~ 141 (184)
T PF07353_consen 101 LSAYQVTNLQPGTKYYISYLVTKGTSTESSNEIPMSTLNRK 141 (184)
T ss_pred ceeEEeeccCCCcEEEEEEEEecCccceecceecccccccc
Confidence 3444568999999998654 43321122334444555543
No 145
>cd02852 Isoamylase_N_term Isoamylase N-terminus domain. Isoamylase (aka glycogen 6-glucanohydrolase) is one of the starch-debranching enzymes that catalyzes the hydrolysis of alpha-1,6-glucosidic linkages specific in alpha-glucans such as amylopectin or glycogen. Isoamylase contains a bound calcium ion, but this is not in the same position as the conserved calcium ion that has been reported in other alpha-amylase family enzymes. The N-terminus of isoamylase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=34.65 E-value=48 Score=28.20 Aligned_cols=23 Identities=43% Similarity=0.751 Sum_probs=20.3
Q ss_pred CcEEEEEeCCCCCCCEEEEEEec
Q 048036 123 GIIHHVRLTGLKPDTLYYYQCGD 145 (472)
Q Consensus 123 ~~~h~v~l~gL~p~t~Y~Yrv~~ 145 (472)
+-++++.|.++.+|+.|.|+|..
T Consensus 48 ~gvW~~~v~~~~~g~~Y~y~v~g 70 (119)
T cd02852 48 GDVWHVFVEGLKPGQLYGYRVDG 70 (119)
T ss_pred CCEEEEEECCCCCCCEEEEEECC
Confidence 35788999999999999999974
No 146
>cd02856 Glycogen_debranching_enzyme_N_term Glycogen_debranching_enzyme N-terminal domain. Glycogen debranching enzymes have both 4-alpha-glucanotransferase and amylo-1,6-glucosidase activities. As a transferase it transfers a segment of a 1,4-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or another 1,4-alpha-D-glucan. As a glucosidase it catalyzes the endohydrolysis of 1,6-alpha-D-glucoside linkages at points of branching in chains of 1,4-linked alpha-D-glucose residues. The N-terminus of the glycogen debranching enzyme may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=34.03 E-value=51 Score=27.29 Aligned_cols=23 Identities=26% Similarity=0.405 Sum_probs=20.1
Q ss_pred CcEEEEEeCCCCCCCEEEEEEec
Q 048036 123 GIIHHVRLTGLKPDTLYYYQCGD 145 (472)
Q Consensus 123 ~~~h~v~l~gL~p~t~Y~Yrv~~ 145 (472)
+-++++.+.++.+|+.|.|+|..
T Consensus 44 ~GvW~~~v~~~~~g~~Y~y~i~g 66 (103)
T cd02856 44 GGVWHGFLPGIKAGQRYGFRVHG 66 (103)
T ss_pred CCEEEEEECCCCCCCEEEEEECC
Confidence 35789999999999999999964
No 147
>PF09294 Interfer-bind: Interferon-alpha/beta receptor, fibronectin type III; InterPro: IPR015373 Members of this family adopt a secondary structure consisting of seven beta-strands arranged in an immunoglobulin-like beta-sandwich, in a Greek-key topology. They are required for binding to interferon-alpha []. ; PDB: 1A21_A 3LQM_B 3ELA_T 1AHW_C 2A2Q_T 1TFH_B 1FAK_T 1WSS_T 1W2K_T 2FIR_T ....
Probab=32.54 E-value=42 Score=27.53 Aligned_cols=20 Identities=35% Similarity=0.466 Sum_probs=15.8
Q ss_pred EEEEeCCCCCCCEEEEEEec
Q 048036 126 HHVRLTGLKPDTLYYYQCGD 145 (472)
Q Consensus 126 h~v~l~gL~p~t~Y~Yrv~~ 145 (472)
-.++|.+|+|++.|..+|..
T Consensus 67 ~~~~l~~L~p~t~YCv~V~~ 86 (106)
T PF09294_consen 67 SSVTLSDLKPGTNYCVSVQA 86 (106)
T ss_dssp EEEEEES--TTSEEEEEEEE
T ss_pred CEEEEeCCCCCCCEEEEEEE
Confidence 45689999999999999987
No 148
>cd02853 MTHase_N_term Maltooligosyl trehalose synthase (MTSase) N-terminus domain. MTSase and maltooligosyl trehalose trehalohydrolase (MTHase) work together to produce trehalose. MTSase is responsible for converting the alpha-1,4-glucosidic linkage to an alpha,alpha-1,1-glucosidic linkage at the reducing end of the maltooligosaccharide through an intramolecular transglucosylation reaction, while MTHase hydrolyzes the penultimate alpha-1,4 linkage of the reducing end, resulting in the release of trehalose. The N-terminus of MTSase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=32.38 E-value=54 Score=26.10 Aligned_cols=21 Identities=24% Similarity=0.336 Sum_probs=18.5
Q ss_pred cEEEEEeCCCCCCCEEEEEEec
Q 048036 124 IIHHVRLTGLKPDTLYYYQCGD 145 (472)
Q Consensus 124 ~~h~v~l~gL~p~t~Y~Yrv~~ 145 (472)
-++++.+.++ +|..|.|+|..
T Consensus 40 G~W~~~v~~~-~g~~Y~y~v~~ 60 (85)
T cd02853 40 GWFEAEVPGA-AGTRYRYRLDD 60 (85)
T ss_pred cEEEEEeCCC-CCCeEEEEECC
Confidence 4788999999 99999999973
No 149
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=30.52 E-value=80 Score=30.51 Aligned_cols=33 Identities=18% Similarity=0.397 Sum_probs=19.4
Q ss_pred EEEEeecCCCCChHHHHHHHHh---CCCC-EEEEcCCccc
Q 048036 172 IAIVGDQGLTYNTTSTVNHMIS---NRPD-LILLVGDVTY 207 (472)
Q Consensus 172 f~v~gD~~~~~~~~~~l~~l~~---~~~D-fvl~~GDl~y 207 (472)
+.+.||+|... .. +-++-+ .-|| =-|+.||++.
T Consensus 48 VTvCGDIHGQF--yD-L~eLFrtgG~vP~tnYiFmGDfVD 84 (306)
T KOG0373|consen 48 VTVCGDIHGQF--YD-LLELFRTGGQVPDTNYIFMGDFVD 84 (306)
T ss_pred eeEeeccchhH--HH-HHHHHHhcCCCCCcceEEeccccc
Confidence 45799998642 22 223333 2244 4578999994
No 150
>cd02860 Pullulanase_N_term Pullulanase domain N-terminus. Pullulanase (AKA dextrinase; alpha-dextrin endo-1,6-alpha glucosidase) is an enzyme with action similar to that of isoamylase; it cleaves 1,6-alpha-glucosidic linkages in pullulan, amylopectin, and glycogen, and in alpha-and beta-amylase limit-dextrins of amylopectin and glycogen. The N-terminus of pullulanase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=30.22 E-value=60 Score=26.62 Aligned_cols=24 Identities=21% Similarity=0.191 Sum_probs=20.6
Q ss_pred CcEEEEEeCCCCCCCEEEEEEecC
Q 048036 123 GIIHHVRLTGLKPDTLYYYQCGDP 146 (472)
Q Consensus 123 ~~~h~v~l~gL~p~t~Y~Yrv~~~ 146 (472)
+-++++.+.++.+|..|.|+|...
T Consensus 46 ~gvw~~~v~~~~~g~~Y~y~i~~~ 69 (100)
T cd02860 46 NGVWSVTLDGDLEGYYYLYEVKVY 69 (100)
T ss_pred CCEEEEEeCCccCCcEEEEEEEEe
Confidence 357889999999999999999753
No 151
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=23.70 E-value=1.9e+02 Score=30.96 Aligned_cols=37 Identities=22% Similarity=0.280 Sum_probs=26.7
Q ss_pred CeEEEEEeecCCCCChHHHHHHHHh-----CCCCEEEEcCCccc
Q 048036 169 PSKIAIVGDQGLTYNTTSTVNHMIS-----NRPDLILLVGDVTY 207 (472)
Q Consensus 169 ~~~f~v~gD~~~~~~~~~~l~~l~~-----~~~Dfvl~~GDl~y 207 (472)
+.||+++||... +..+.++++.+ ...|++|++|++.-
T Consensus 5 ~~kILv~Gd~~G--r~~eli~rI~~v~Kk~GpFd~liCvGnfF~ 46 (528)
T KOG2476|consen 5 DAKILVCGDVEG--RFDELIKRIQKVNKKSGPFDLLICVGNFFG 46 (528)
T ss_pred CceEEEEcCccc--cHHHHHHHHHHHhhcCCCceEEEEecccCC
Confidence 358999999854 34455555542 35899999999983
No 152
>PF10179 DUF2369: Uncharacterised conserved protein (DUF2369); InterPro: IPR019326 This is a proline-rich region of a group of proteins found from plants to fungi. The function is largely unknown, although the entry contains Fibronectin type-III domain-containing protein C4orf31, which promotes matrix assembly and cell adhesiveness.
Probab=21.18 E-value=99 Score=31.29 Aligned_cols=22 Identities=27% Similarity=0.445 Sum_probs=18.4
Q ss_pred EEEEeCCCCCCCEEEEEEecCC
Q 048036 126 HHVRLTGLKPDTLYYYQCGDPS 147 (472)
Q Consensus 126 h~v~l~gL~p~t~Y~Yrv~~~~ 147 (472)
=..+|.||+||+.|-..|....
T Consensus 260 ~tetI~~L~PG~~Yl~dV~~~~ 281 (300)
T PF10179_consen 260 TTETIKGLKPGTTYLFDVYVNG 281 (300)
T ss_pred ceeecccCCCCcEEEEEEEEec
Confidence 3447999999999999998764
No 153
>PF10179 DUF2369: Uncharacterised conserved protein (DUF2369); InterPro: IPR019326 This is a proline-rich region of a group of proteins found from plants to fungi. The function is largely unknown, although the entry contains Fibronectin type-III domain-containing protein C4orf31, which promotes matrix assembly and cell adhesiveness.
Probab=20.92 E-value=82 Score=31.86 Aligned_cols=21 Identities=43% Similarity=0.694 Sum_probs=16.9
Q ss_pred EEEEeCCCCCCCEEEEEEecC
Q 048036 126 HHVRLTGLKPDTLYYYQCGDP 146 (472)
Q Consensus 126 h~v~l~gL~p~t~Y~Yrv~~~ 146 (472)
..-+|.+|+|+|+||+.|-.-
T Consensus 15 t~~t~~~L~p~t~YyfdVF~v 35 (300)
T PF10179_consen 15 TNQTLSGLKPDTTYYFDVFVV 35 (300)
T ss_pred ceEEeccCCCCCeEEEEEEEE
Confidence 345678999999999998643
No 154
>PHA03008 hypothetical protein; Provisional
Probab=20.77 E-value=1.4e+02 Score=28.32 Aligned_cols=41 Identities=2% Similarity=0.042 Sum_probs=28.5
Q ss_pred EEEecCCcccCCCCCCCchHHHHHHhhhc-CceEEEecccccee
Q 048036 295 VVTWHAPWYNTYKAHYREAECMRVVAMED-GVDVVFNGHVHAYE 337 (472)
Q Consensus 295 Iv~~H~P~y~~~~~~~~~~~~~r~~~le~-~VdlvlsGH~H~Y~ 337 (472)
|++.|-|++.-...+.++.+.++. +++ ++.+.+.||.-+|.
T Consensus 164 ILITHgPP~GhLD~~vGC~~Ll~~--I~rVKPKyHVFGh~~~~~ 205 (234)
T PHA03008 164 ILITASPPFAILDDDLACGDLFSK--VIKIKPKFHIFNGLTQFS 205 (234)
T ss_pred EEEeCCCCccccccccCcHHHHHH--HHHhCCcEEEeCCccccC
Confidence 899999999764333345443443 345 88999999977664
No 155
>KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms]
Probab=20.18 E-value=3.7e+02 Score=31.95 Aligned_cols=95 Identities=17% Similarity=0.160 Sum_probs=55.8
Q ss_pred CCCCCceEEEEecCCCCeeEEEEEcCCCcccCCCCCCCCCCCCcEEEEecc----CCCCccEEEEEEEEEeeeeccCCcc
Q 048036 43 EGFEPEQISVSLSSTHDSVWISWITGEFQIGNNIKPLDPKIIASVVRYATR----RSQLNRKATGHSLVYNQLYPFLGLQ 118 (472)
Q Consensus 43 ~~~~P~qv~Lt~~~d~~s~~V~W~T~~~~~g~~~~~~~~~~~~~~V~yg~~----~~~~~~~~~g~~~~y~~~~~~~g~~ 118 (472)
++..|.+|++.=.. ++++.++|.-+... ..++..|-.. ....|..+. +. .+.
T Consensus 614 pPgpP~~v~~~~i~-~t~~~lsW~~g~dn------------~SpI~~Y~iq~rt~~~~~W~~v~-~v---------p~~- 669 (1051)
T KOG3513|consen 614 PPGPPPDVHVDDIS-DTTARLSWSPGSDN------------NSPIEKYTIQFRTPFPGKWKAVT-TV---------PGN- 669 (1051)
T ss_pred CCCCCCceeEeeec-cceEEEEeecCCCC------------CCCceEEeEEecCCCCCcceEee-EC---------CCc-
Confidence 45567777765443 68999999876542 2445556543 233344442 21 111
Q ss_pred ccccCcEEEEEeCCCCCCCEEEEEEecCCCCC---cc-ceeEEEcCCCCC
Q 048036 119 NYTSGIIHHVRLTGLKPDTLYYYQCGDPSIPA---MS-GTYYFRTMPDSS 164 (472)
Q Consensus 119 ~~~~~~~h~v~l~gL~p~t~Y~Yrv~~~~~~~---~S-~~~~F~T~p~~~ 164 (472)
..+- +.+++-+|.|-..|.|||.+.+.-+ -| +.-..+|.++..
T Consensus 670 --~~~~-~sa~vv~L~Pwv~YeFRV~AvN~iG~gePS~pS~~~rT~ea~P 716 (1051)
T KOG3513|consen 670 --ITGD-ESATVVNLSPWVEYEFRVVAVNSIGIGEPSPPSEKVRTPEAAP 716 (1051)
T ss_pred --ccCc-cceeEEccCCCcceEEEEEEEcccccCCCCCCccceecCCCCC
Confidence 1234 6788899999999999998654211 11 233456766543
Done!