Query 048038
Match_columns 591
No_of_seqs 295 out of 1757
Neff 6.9
Searched_HMMs 46136
Date Fri Mar 29 05:40:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048038.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/048038hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1397 Ca2+/H+ antiporter VCX 100.0 7.4E-42 1.6E-46 349.6 21.3 321 91-582 97-434 (441)
2 TIGR00378 cax calcium/proton e 100.0 2.4E-37 5.3E-42 327.6 30.9 318 87-578 16-345 (349)
3 TIGR00846 caca2 calcium/proton 100.0 1.3E-35 2.8E-40 315.8 29.6 318 87-580 34-363 (365)
4 COG0387 ChaA Ca2+/H+ antiporte 100.0 6E-34 1.3E-38 294.5 31.7 321 92-583 38-366 (368)
5 PRK10734 putative calcium/sodi 100.0 3.2E-31 6.9E-36 277.9 30.1 307 91-585 6-320 (325)
6 COG0530 ECM27 Ca2+/Na+ antipor 100.0 1.5E-30 3.2E-35 271.3 28.5 301 89-583 11-319 (320)
7 TIGR00367 K+-dependent Na+/Ca+ 100.0 4.4E-29 9.6E-34 260.5 28.4 299 88-577 2-307 (307)
8 KOG1307 K+-dependent Ca2+/Na+ 100.0 1.8E-28 3.8E-33 255.4 20.9 134 93-267 64-201 (588)
9 PRK10599 calcium/sodium:proton 100.0 7.6E-27 1.6E-31 245.0 28.8 306 100-582 51-365 (366)
10 TIGR00927 2A1904 K+-dependent 99.9 2.4E-26 5.2E-31 257.7 23.3 145 439-586 935-1087(1096)
11 PLN03151 cation/calcium exchan 99.8 7.7E-16 1.7E-20 173.6 33.6 153 437-590 484-646 (650)
12 PRK10734 putative calcium/sodi 99.4 1.6E-12 3.4E-17 137.0 15.8 137 438-582 4-144 (325)
13 PF01699 Na_Ca_ex: Sodium/calc 99.3 4.5E-12 9.7E-17 116.7 8.8 128 447-580 1-139 (140)
14 COG0530 ECM27 Ca2+/Na+ antipor 99.3 3.3E-11 7.1E-16 126.4 15.3 141 434-582 7-151 (320)
15 TIGR00367 K+-dependent Na+/Ca+ 99.3 8.5E-11 1.8E-15 123.1 15.3 136 439-583 4-144 (307)
16 TIGR00927 2A1904 K+-dependent 99.2 9.5E-11 2.1E-15 133.3 14.4 131 446-584 469-605 (1096)
17 PF13499 EF-hand_7: EF-hand do 99.1 6.5E-11 1.4E-15 95.0 4.9 66 311-376 1-66 (66)
18 PF01699 Na_Ca_ex: Sodium/calc 99.1 1.3E-10 2.9E-15 106.9 5.7 83 98-187 2-86 (140)
19 KOG2399 K+-dependent Na+:Ca2+ 99.1 9.7E-09 2.1E-13 114.9 20.9 151 432-585 442-601 (605)
20 TIGR00845 caca sodium/calcium 98.9 7.7E-09 1.7E-13 119.7 14.5 140 437-583 754-919 (928)
21 cd05022 S-100A13 S-100A13: S-1 98.9 1.7E-09 3.6E-14 92.6 6.5 73 307-383 5-80 (89)
22 TIGR00846 caca2 calcium/proton 98.9 5E-09 1.1E-13 112.2 11.8 87 90-183 223-312 (365)
23 cd05026 S-100Z S-100Z: S-100Z 98.9 2E-09 4.4E-14 92.9 6.7 73 308-380 8-83 (93)
24 cd05027 S-100B S-100B: S-100B 98.8 6.6E-09 1.4E-13 88.8 6.9 68 308-379 6-80 (88)
25 COG5126 FRQ1 Ca2+-binding prot 98.8 8.4E-09 1.8E-13 97.1 7.1 69 306-378 88-156 (160)
26 cd00213 S-100 S-100: S-100 dom 98.8 1.9E-08 4.2E-13 85.6 7.9 78 306-383 4-84 (88)
27 PLN03151 cation/calcium exchan 98.8 8E-08 1.7E-12 109.2 14.9 129 446-582 152-288 (650)
28 smart00027 EH Eps15 homology d 98.8 1.8E-08 4E-13 87.3 7.2 69 305-379 5-73 (96)
29 cd05025 S-100A1 S-100A1: S-100 98.7 2.3E-08 5E-13 86.0 6.5 73 308-380 7-82 (92)
30 cd00052 EH Eps15 homology doma 98.7 3.8E-08 8.2E-13 78.6 6.8 60 313-378 2-61 (67)
31 cd05029 S-100A6 S-100A6: S-100 98.7 3.6E-08 7.8E-13 84.3 6.8 68 307-378 7-79 (88)
32 cd05031 S-100A10_like S-100A10 98.7 4.2E-08 9.2E-13 84.7 7.2 70 309-378 7-79 (94)
33 KOG0027 Calmodulin and related 98.6 5.6E-08 1.2E-12 91.3 7.3 66 308-377 83-148 (151)
34 cd05023 S-100A11 S-100A11: S-1 98.6 7.1E-08 1.5E-12 82.7 7.0 73 307-379 6-81 (89)
35 cd00252 SPARC_EC SPARC_EC; ext 98.5 2.4E-07 5.1E-12 83.3 8.0 63 306-376 44-106 (116)
36 TIGR00845 caca sodium/calcium 98.5 3.5E-07 7.7E-12 106.2 10.9 103 77-187 745-850 (928)
37 KOG0027 Calmodulin and related 98.5 1.9E-07 4.1E-12 87.7 7.1 74 305-382 3-76 (151)
38 TIGR00378 cax calcium/proton e 98.5 1.3E-06 2.7E-11 93.4 12.8 134 439-582 19-172 (349)
39 PTZ00184 calmodulin; Provision 98.5 4.1E-07 8.8E-12 83.7 7.7 74 303-380 4-77 (149)
40 COG5126 FRQ1 Ca2+-binding prot 98.4 4.5E-07 9.8E-12 85.4 7.3 76 301-381 11-86 (160)
41 cd00051 EFh EF-hand, calcium b 98.4 8.7E-07 1.9E-11 68.1 6.3 60 312-375 2-61 (63)
42 PF13833 EF-hand_8: EF-hand do 98.3 8E-07 1.7E-11 68.4 5.2 53 323-378 1-53 (54)
43 PTZ00183 centrin; Provisional 98.3 1.2E-06 2.6E-11 81.7 7.3 72 303-378 10-81 (158)
44 cd05030 calgranulins Calgranul 98.3 2.2E-06 4.8E-11 73.2 7.7 75 307-381 5-82 (88)
45 PTZ00183 centrin; Provisional 98.3 2.5E-06 5.4E-11 79.5 7.7 68 307-378 87-154 (158)
46 KOG0377 Protein serine/threoni 98.2 1.8E-06 3.9E-11 91.1 6.6 71 308-378 545-615 (631)
47 KOG0034 Ca2+/calmodulin-depend 98.2 2.8E-06 6E-11 82.5 6.6 72 307-378 101-175 (187)
48 PTZ00184 calmodulin; Provision 98.2 4E-06 8.7E-11 77.0 7.2 66 308-377 82-147 (149)
49 KOG0028 Ca2+-binding protein ( 98.0 1.8E-05 3.9E-10 73.7 8.2 66 308-377 104-169 (172)
50 KOG1307 K+-dependent Ca2+/Na+ 98.0 5.9E-06 1.3E-10 88.1 5.0 132 439-579 64-200 (588)
51 PF14658 EF-hand_9: EF-hand do 98.0 1.6E-05 3.5E-10 63.7 5.7 64 314-380 2-66 (66)
52 KOG0037 Ca2+-binding protein, 97.9 2.8E-05 6E-10 76.0 8.2 69 309-381 123-191 (221)
53 KOG0028 Ca2+-binding protein ( 97.9 2.3E-05 5E-10 72.9 7.0 75 304-382 27-101 (172)
54 cd05024 S-100A10 S-100A10: A s 97.9 3.3E-05 7.1E-10 66.2 6.9 71 308-379 6-77 (91)
55 KOG0044 Ca2+ sensor (EF-Hand s 97.8 3.3E-05 7.2E-10 75.3 5.6 72 309-380 99-177 (193)
56 KOG0036 Predicted mitochondria 97.8 2.7E-05 5.9E-10 82.2 5.4 66 307-376 79-144 (463)
57 KOG0041 Predicted Ca2+-binding 97.8 2.8E-05 6.1E-10 74.7 4.9 70 305-378 94-163 (244)
58 PF00036 EF-hand_1: EF hand; 97.7 3E-05 6.4E-10 52.2 2.8 26 312-337 2-27 (29)
59 KOG0031 Myosin regulatory ligh 97.7 0.00011 2.3E-09 68.2 7.2 69 305-377 96-164 (171)
60 PLN02964 phosphatidylserine de 97.7 7.2E-05 1.6E-09 85.1 6.9 67 310-380 179-245 (644)
61 KOG0046 Ca2+-binding actin-bun 97.7 8E-05 1.7E-09 80.6 6.8 79 302-382 11-89 (627)
62 PF12763 EF-hand_4: Cytoskelet 97.6 0.00017 3.6E-09 63.7 7.4 70 304-380 4-73 (104)
63 PF00036 EF-hand_1: EF hand; 97.6 4.3E-05 9.3E-10 51.4 2.6 28 351-378 1-28 (29)
64 PF13405 EF-hand_6: EF-hand do 97.5 7.1E-05 1.5E-09 51.0 2.8 30 311-340 1-31 (31)
65 KOG0036 Predicted mitochondria 97.5 0.00026 5.5E-09 75.0 7.5 72 305-379 9-80 (463)
66 KOG0031 Myosin regulatory ligh 97.5 0.00026 5.5E-09 65.7 6.2 71 303-381 25-95 (171)
67 PF13202 EF-hand_5: EF hand; P 97.4 0.00013 2.8E-09 47.4 2.6 24 312-335 1-24 (25)
68 KOG0030 Myosin essential light 97.4 0.00076 1.6E-08 61.6 8.0 73 300-377 78-150 (152)
69 KOG0040 Ca2+-binding actin-bun 97.3 0.00055 1.2E-08 81.4 8.4 95 286-380 2229-2326(2399)
70 PRK12309 transaldolase/EF-hand 97.3 0.00042 9.2E-09 74.9 7.1 59 305-380 329-387 (391)
71 PLN02964 phosphatidylserine de 97.3 0.00033 7.2E-09 79.7 6.5 67 305-379 138-208 (644)
72 PF10591 SPARC_Ca_bdg: Secrete 97.1 0.00014 2.9E-09 65.3 0.7 64 305-374 49-112 (113)
73 KOG0030 Myosin essential light 97.1 0.00074 1.6E-08 61.7 5.4 71 305-379 6-78 (152)
74 KOG4065 Uncharacterized conser 97.1 0.00087 1.9E-08 59.1 5.4 63 313-375 70-142 (144)
75 KOG4223 Reticulocalbin, calume 97.1 0.00065 1.4E-08 70.2 5.1 70 306-379 73-142 (325)
76 KOG0044 Ca2+ sensor (EF-Hand s 97.0 0.001 2.2E-08 65.0 5.5 70 307-380 61-130 (193)
77 KOG4223 Reticulocalbin, calume 97.0 0.00086 1.9E-08 69.3 4.9 69 309-380 162-230 (325)
78 KOG4251 Calcium binding protei 97.0 0.0013 2.9E-08 65.1 5.9 70 308-378 99-168 (362)
79 KOG0037 Ca2+-binding protein, 96.8 0.0045 9.8E-08 60.8 8.1 75 308-385 55-132 (221)
80 PRK10599 calcium/sodium:proton 96.7 0.012 2.7E-07 62.9 11.1 90 89-185 224-314 (366)
81 KOG0034 Ca2+/calmodulin-depend 96.2 0.01 2.2E-07 57.9 6.2 69 304-380 27-97 (187)
82 PF13202 EF-hand_5: EF hand; P 96.1 0.0034 7.3E-08 40.7 1.7 23 352-374 1-23 (25)
83 KOG1306 Ca2+/Na+ exchanger NCX 96.1 0.011 2.4E-07 64.2 6.6 73 442-521 431-504 (596)
84 KOG0038 Ca2+-binding kinase in 96.0 0.013 2.9E-07 53.9 5.5 69 307-378 105-177 (189)
85 PF14788 EF-hand_10: EF hand; 95.8 0.016 3.4E-07 44.2 4.3 48 326-377 1-48 (51)
86 PF13405 EF-hand_6: EF-hand do 95.6 0.01 2.2E-07 40.2 2.5 28 351-378 1-28 (31)
87 KOG2399 K+-dependent Na+:Ca2+ 95.2 0.043 9.4E-07 62.3 7.3 123 450-583 120-251 (605)
88 smart00054 EFh EF-hand, calciu 95.1 0.023 5E-07 35.9 2.8 26 312-337 2-27 (29)
89 KOG1306 Ca2+/Na+ exchanger NCX 94.6 0.024 5.2E-07 61.7 3.0 103 75-185 415-520 (596)
90 COG0387 ChaA Ca2+/H+ antiporte 94.5 0.32 7E-06 51.9 11.0 79 96-181 229-310 (368)
91 smart00054 EFh EF-hand, calciu 93.9 0.055 1.2E-06 34.1 2.6 28 351-378 1-28 (29)
92 PF13833 EF-hand_8: EF-hand do 93.6 0.084 1.8E-06 40.2 3.5 31 307-337 22-52 (54)
93 KOG3555 Ca2+-binding proteogly 93.3 0.099 2.1E-06 54.6 4.5 65 304-376 244-308 (434)
94 KOG3866 DNA-binding protein of 92.9 0.12 2.6E-06 53.2 4.3 66 312-378 246-324 (442)
95 PF13499 EF-hand_7: EF-hand do 91.9 0.17 3.8E-06 39.9 3.3 28 309-336 39-66 (66)
96 KOG1397 Ca2+/H+ antiporter VCX 90.6 0.44 9.5E-06 50.9 5.6 87 89-182 292-380 (441)
97 cd05026 S-100Z S-100Z: S-100Z 88.4 0.61 1.3E-05 40.1 4.0 34 307-340 50-83 (93)
98 cd05024 S-100A10 S-100A10: A s 87.9 1.6 3.6E-05 37.5 6.3 35 306-340 44-78 (91)
99 KOG1955 Ral-GTPase effector RA 87.8 0.82 1.8E-05 50.0 5.3 70 305-380 226-295 (737)
100 PF14788 EF-hand_10: EF hand; 87.6 0.64 1.4E-05 35.6 3.1 34 305-338 16-49 (51)
101 KOG0377 Protein serine/threoni 87.5 1.3 2.8E-05 48.0 6.5 75 309-383 463-580 (631)
102 KOG2643 Ca2+ binding protein, 86.7 0.77 1.7E-05 49.7 4.3 74 309-382 232-318 (489)
103 PF09279 EF-hand_like: Phospho 86.4 0.74 1.6E-05 38.4 3.3 63 311-376 1-67 (83)
104 cd00252 SPARC_EC SPARC_EC; ext 86.1 0.86 1.9E-05 41.1 3.7 29 309-337 79-107 (116)
105 KOG1029 Endocytic adaptor prot 86.0 1.1 2.3E-05 51.6 5.1 67 305-377 190-256 (1118)
106 cd05022 S-100A13 S-100A13: S-1 85.4 0.96 2.1E-05 38.7 3.5 30 310-339 47-76 (89)
107 cd05023 S-100A11 S-100A11: S-1 85.1 1.2 2.5E-05 38.1 3.9 33 307-339 49-81 (89)
108 KOG4251 Calcium binding protei 84.7 1.6 3.6E-05 43.8 5.2 63 309-375 280-342 (362)
109 cd05029 S-100A6 S-100A6: S-100 82.6 1.7 3.8E-05 37.0 3.9 34 307-340 48-81 (88)
110 KOG2243 Ca2+ release channel ( 81.4 2.1 4.6E-05 51.7 5.1 58 316-378 4063-4120(5019)
111 cd05030 calgranulins Calgranul 81.1 2.1 4.6E-05 36.3 3.9 33 307-339 48-80 (88)
112 cd05025 S-100A1 S-100A1: S-100 80.5 2.2 4.7E-05 36.3 3.8 34 307-340 49-82 (92)
113 cd05027 S-100B S-100B: S-100B 80.4 2.3 4.9E-05 36.2 3.9 34 307-340 48-81 (88)
114 cd00051 EFh EF-hand, calcium b 80.1 2.2 4.9E-05 31.6 3.5 31 306-336 32-62 (63)
115 cd05031 S-100A10_like S-100A10 79.4 2.3 5E-05 36.3 3.7 34 308-341 49-82 (94)
116 KOG2643 Ca2+ binding protein, 79.3 1.2 2.5E-05 48.4 2.1 73 309-382 356-457 (489)
117 KOG2562 Protein phosphatase 2 77.9 4 8.7E-05 44.7 5.7 65 309-380 277-345 (493)
118 cd00052 EH Eps15 homology doma 77.4 3.4 7.3E-05 32.2 3.8 31 308-338 31-61 (67)
119 KOG0035 Ca2+-binding actin-bun 76.7 3.3 7.2E-05 49.0 5.0 83 297-379 734-817 (890)
120 KOG4578 Uncharacterized conser 76.5 1.6 3.5E-05 45.6 2.2 65 306-376 328-396 (421)
121 KOG0169 Phosphoinositide-speci 74.1 3.9 8.4E-05 47.4 4.5 67 306-376 132-198 (746)
122 smart00027 EH Eps15 homology d 70.8 4.7 0.0001 34.5 3.4 29 350-378 10-38 (96)
123 KOG0042 Glycerol-3-phosphate d 67.8 11 0.00023 42.6 6.0 74 304-381 587-660 (680)
124 cd00213 S-100 S-100: S-100 dom 67.1 7.6 0.00017 32.5 3.9 32 308-339 49-80 (88)
125 KOG2562 Protein phosphatase 2 65.3 8.8 0.00019 42.2 4.7 70 305-374 346-420 (493)
126 PLN03225 Serine/threonine-prot 65.3 3.4 7.5E-05 47.2 1.8 117 247-377 428-547 (566)
127 PRK12309 transaldolase/EF-hand 64.5 5.8 0.00013 43.3 3.2 31 308-338 355-385 (391)
128 PF08726 EFhand_Ca_insen: Ca2+ 64.4 5.4 0.00012 32.5 2.3 56 308-375 4-66 (69)
129 PF05517 p25-alpha: p25-alpha 58.4 21 0.00045 33.7 5.5 67 312-379 1-70 (154)
130 KOG0751 Mitochondrial aspartat 56.3 25 0.00054 39.1 6.1 64 309-378 72-136 (694)
131 PF09069 EF-hand_3: EF-hand; 55.9 58 0.0013 28.0 7.2 65 309-376 2-73 (90)
132 COG4792 EscU Type III secretor 55.8 2.7E+02 0.0059 29.4 15.4 67 76-142 20-88 (349)
133 COG1230 CzcD Co/Zn/Cd efflux s 54.2 1.2E+02 0.0026 31.9 10.7 109 436-556 24-141 (296)
134 KOG4666 Predicted phosphate ac 53.6 14 0.00029 39.0 3.5 67 309-381 295-362 (412)
135 PF08976 DUF1880: Domain of un 52.9 10 0.00023 34.0 2.3 32 346-377 3-34 (118)
136 PF12763 EF-hand_4: Cytoskelet 51.6 17 0.00038 32.0 3.5 34 306-339 39-72 (104)
137 KOG4004 Matricellular protein 49.5 7.3 0.00016 38.1 0.8 53 316-374 193-246 (259)
138 KOG0998 Synaptic vesicle prote 49.0 8 0.00017 46.4 1.2 72 305-382 278-349 (847)
139 KOG0033 Ca2+/calmodulin-depend 48.1 12 0.00025 38.4 2.0 48 246-296 244-293 (355)
140 TIGR03142 cytochro_ccmI cytoch 44.7 1E+02 0.0022 27.5 7.4 24 312-335 41-65 (117)
141 PF10591 SPARC_Ca_bdg: Secrete 44.0 20 0.00044 32.0 2.8 29 306-334 84-112 (113)
142 KOG0032 Ca2+/calmodulin-depend 43.8 12 0.00025 40.8 1.4 76 246-324 270-353 (382)
143 KOG0041 Predicted Ca2+-binding 42.4 51 0.0011 32.6 5.3 73 301-375 125-200 (244)
144 KOG0751 Mitochondrial aspartat 41.7 39 0.00086 37.6 4.9 72 311-385 109-182 (694)
145 PF05478 Prominin: Prominin; 41.3 71 0.0015 38.3 7.6 118 123-270 370-498 (806)
146 KOG1707 Predicted Ras related/ 39.0 22 0.00047 40.4 2.6 36 305-340 310-345 (625)
147 PF09156 Anthrax-tox_M: Anthra 38.8 1.8E+02 0.0039 28.0 8.3 62 313-376 53-116 (287)
148 KOG4629 Predicted mechanosensi 33.7 1.1E+02 0.0023 36.2 7.1 66 309-385 403-468 (714)
149 KOG4347 GTPase-activating prot 32.6 46 0.00099 38.3 3.8 28 351-378 556-583 (671)
150 PF14658 EF-hand_9: EF-hand do 32.5 63 0.0014 26.2 3.6 32 306-337 31-63 (66)
151 PRK09509 fieF ferrous iron eff 29.3 6.6E+02 0.014 26.0 11.7 49 435-483 77-125 (299)
152 PF14513 DAG_kinase_N: Diacylg 28.9 55 0.0012 30.5 3.1 52 324-381 5-63 (138)
153 PHA02650 hypothetical protein; 28.5 1.6E+02 0.0034 24.7 5.2 13 368-380 19-31 (81)
154 COG0798 ACR3 Arsenite efflux p 28.4 7.7E+02 0.017 26.5 11.9 82 467-556 107-195 (342)
155 COG2860 Predicted membrane pro 28.2 1.9E+02 0.0042 28.8 6.9 67 483-557 13-82 (209)
156 PRK03612 spermidine synthase; 27.5 6.3E+02 0.014 28.6 12.0 21 505-525 145-165 (521)
157 cd07313 terB_like_2 tellurium 26.9 75 0.0016 27.2 3.5 56 323-380 12-67 (104)
158 PF06570 DUF1129: Protein of u 26.7 6.1E+02 0.013 24.8 12.2 11 375-385 33-43 (206)
159 PF14163 SieB: Superinfection 26.6 2.4E+02 0.0052 26.2 7.1 18 301-318 76-93 (151)
160 KOG0038 Ca2+-binding kinase in 26.0 1.2E+02 0.0027 28.5 4.8 60 317-379 78-137 (189)
161 PF00404 Dockerin_1: Dockerin 26.0 76 0.0016 19.8 2.3 14 320-333 1-14 (21)
162 PF05042 Caleosin: Caleosin re 25.1 1.6E+02 0.0035 28.4 5.6 57 304-384 90-146 (174)
163 COG1283 NptA Na+/phosphate sym 25.0 6.5E+02 0.014 28.8 11.1 248 93-372 136-439 (533)
164 PHA01815 hypothetical protein 24.7 2.7E+02 0.0059 20.8 5.4 12 573-584 41-52 (55)
165 PF07499 RuvA_C: RuvA, C-termi 24.6 62 0.0013 24.0 2.1 43 329-379 3-45 (47)
166 PF01595 DUF21: Domain of unkn 23.9 6E+02 0.013 23.7 11.2 18 322-339 156-173 (183)
167 COG4035 Predicted membrane pro 23.7 1.6E+02 0.0034 25.5 4.5 50 535-590 59-108 (108)
168 KOG1029 Endocytic adaptor prot 23.7 1.4E+02 0.0031 35.1 5.7 55 321-381 26-80 (1118)
169 PF01023 S_100: S-100/ICaBP ty 23.6 74 0.0016 23.5 2.4 30 309-338 5-36 (44)
170 PHA02844 putative transmembran 23.6 2.3E+02 0.0049 23.5 5.3 13 368-380 19-31 (75)
171 PF14293 YWFCY: YWFCY protein 23.4 2.7E+02 0.0058 22.3 5.5 40 246-293 12-54 (61)
172 PRK12821 aspartyl/glutamyl-tRN 23.0 7.2E+02 0.016 27.8 10.6 30 326-359 388-417 (477)
173 COG0786 GltS Na+/glutamate sym 22.5 3.6E+02 0.0079 29.5 8.2 46 89-135 7-54 (404)
174 PF03616 Glt_symporter: Sodium 22.2 1.9E+02 0.0042 31.3 6.3 41 92-133 8-50 (368)
175 KOG4666 Predicted phosphate ac 21.8 1.3E+02 0.0029 31.9 4.6 66 306-374 255-320 (412)
176 KOG0039 Ferric reductase, NADH 21.6 87 0.0019 36.6 3.7 69 307-376 15-87 (646)
177 PF13194 DUF4010: Domain of un 21.6 6.5E+02 0.014 25.0 9.4 28 562-589 123-150 (211)
178 PHA02819 hypothetical protein; 21.4 2.6E+02 0.0057 22.9 5.2 13 368-380 19-31 (71)
179 PF09068 EF-hand_2: EF hand; 21.1 1.6E+02 0.0035 26.9 4.6 71 307-377 38-124 (127)
180 KOG1707 Predicted Ras related/ 20.8 1.8E+02 0.004 33.3 5.7 54 308-361 193-246 (625)
181 PHA03054 IMV membrane protein; 20.7 2.9E+02 0.0062 22.7 5.3 13 368-380 19-31 (72)
No 1
>KOG1397 consensus Ca2+/H+ antiporter VCX1 and related proteins [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.4e-42 Score=349.63 Aligned_cols=321 Identities=23% Similarity=0.359 Sum_probs=270.2
Q ss_pred HHHHHHHHH-HHHHhHHHHHHHHHHHHhCCCccchhHHhhhcchhHHHHHHHhhcccchhhhhccceeehhhhhhHHHHH
Q 048038 91 LIIVYGYLM-YVAATYLSNGSELLLEILGPGVVGGLFLPILGALPDAMLILVSGLSGTKETAQSQVSVGMGLLAGSTVML 169 (591)
Q Consensus 91 li~v~g~ll-~~~a~~l~~g~e~L~~~lgp~iiG~~i~~~lgslPE~~i~l~s~l~~~~~~a~~~v~v~~G~l~GS~i~~ 169 (591)
.+|..+++. +|.|.+++.++|+|+...||++ ||+++|++||+.|+++ ++.++.|+++++++|+++||++.|
T Consensus 97 ~vF~lsll~iiPLA~~l~~ateqls~~tg~tv-GgllNAtfGnaiElii-------~ilALk~g~~riVq~SlLGSILsn 168 (441)
T KOG1397|consen 97 WVFLLSLLGIIPLAERLGFATEQLSAYTGPTV-GGLLNATFGNAIELII-------YILALKNGKVRIVQGSLLGSILSN 168 (441)
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcH-HHHHhhhhccHHHHHH-------HHHHhhcCceEEEehhhHHHHHHH
Confidence 456667777 9999999999999999999875 9999999999999999 888999999999999999999999
Q ss_pred HHHHHHHHhhhcccccccCccccccCCccccccccccceeecccchhhhHHHHHHHHHHHHHHhhhhhccccc-------
Q 048038 170 STVIWGTCVVVGKCDLRESDSVAIDGQNTKGFRLTGTGVSTDVWTCYAARIMAISVIPFVVVQLPQMLNSTSG------- 242 (591)
Q Consensus 170 ltli~G~~~l~g~~~~~~~~~~~~~~~~~~~f~~~~~gv~~~~~~~~~a~im~ls~~~~li~~lp~~~~~~~~------- 242 (591)
+++++|+|++.|++++++| +||.+.+++ .+.++.++++..+ +|++++.+.+
T Consensus 169 lLLvlG~s~~~Ggi~rk~Q-----------~Fn~~~A~v--------~s~lLl~a~l~~l---~P~~l~~~~~~~~~~~~ 226 (441)
T KOG1397|consen 169 LLLVLGLSLFCGGIRRKDQ-----------RFNIKSAGV--------NSALLLLAVLGIL---LPTVLHYTYGGEVHDCS 226 (441)
T ss_pred HHHHhhHHHhhccccccee-----------ecccchhhH--------HHHHHHHHHHHHH---HHHHHHHhcCccccccC
Confidence 9999999999999998887 999999998 8889999999988 9999986643
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhccchhhhHHHHHHhhhhhhhhcccCCcccHHHHHHHhhhhcC
Q 048038 243 -RHLAVLIALILSVSMLISYCLYQVFQPWIQKRRLAFAKHKHVISGILKHLRQRALGRLLTDSGEPNIDVIKKLFDAIDE 321 (591)
Q Consensus 243 -~~~~~~is~ivsv~lli~Ysayq~lhpWiq~~~~~~~~~~~l~~~il~~lk~~~l~~l~~~~~~~~~~~Lr~lF~~iD~ 321 (591)
......+|+..+++++++|.+|..||.|-+ +|.+ +...+
T Consensus 227 ~~~~~l~lSr~~SivmliaYi~~L~FqL~t~-------~h~~-------------------~~~~~-------------- 266 (441)
T KOG1397|consen 227 SGGAILPLSRGCSIVMLIAYIAYLWFQLKTA-------RHIW-------------------QFPTP-------------- 266 (441)
T ss_pred CccceeeehhccHHHHHHHHHHHHHHhhhcc-------cccC-------------------CCCCC--------------
Confidence 233567899999999999999987766531 1100 00000
Q ss_pred CCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcc
Q 048038 322 NKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEKWLNEAMQARTGSADPGPHTMKFL 401 (591)
Q Consensus 322 n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~~~~~~k~~~~~~~~~~~~~~~~~ 401 (591)
T Consensus 267 -------------------------------------------------------------------------------- 266 (441)
T KOG1397|consen 267 -------------------------------------------------------------------------------- 266 (441)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccchhhhhhhhcCCccccchhccccCCCcchHHHHHHHHHHHHHHHHhhHHHHHHhHHHHHHhcCCCchhhhhhhhhc
Q 048038 402 DDFHLQTKREHALLGAEEESDEVAEGVENPKWVSFKAVLMLLIGTIIAAAFADPLVDAVDNFSAATSIPSFFISFIALPF 481 (591)
Q Consensus 402 ~~~~~~~~~e~~~l~~e~~~~e~~~~~~~~~~~~~~~v~~Ll~g~~~~~~~A~~lV~si~~~a~~~gIs~~~Is~iilPl 481 (591)
+ +|. ++.+++...+++.|.|++|+++.+|+..|++++++||++|+.+++.++.+|+|+.|||+|++|+
T Consensus 267 ------~-ee~-----~~~d~~~s~~~e~p~is~~ss~~~L~~~T~~vsllaeyLV~~Id~~~ds~~ls~~Figlillpi 334 (441)
T KOG1397|consen 267 ------D-EEE-----TEQDDEVSNEDEAPNISRWSSIIWLLIMTLLVSLLAEYLVDTIDDVSDSWGLSVKFIGLILLPI 334 (441)
T ss_pred ------C-hhc-----ccccccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhheeeeecc
Confidence 0 000 0111122224456899999999999999999999999999999999999999999999999999
Q ss_pred cccchhHHHHHHHHHhccccccccccchhhhhhhHHHHHHHH-------HHHHHHHhcCcccccch-hHHHHHHHHHHHH
Q 048038 482 ATNSSEAVSAIIFASRKKIRTASLTFSELYGAVTMNNILCLS-------VFLALVYARGLTWDFSS-EVLVILIVCLVMG 553 (591)
Q Consensus 482 ats~~E~vsai~~A~k~k~~~as~t~s~i~g~v~m~n~l~l~-------vfl~lv~~r~l~w~fs~-evlvil~v~~~~~ 553 (591)
++|+.|++.||+||.|+|.+++ .+|+.|+.+|++ ++.+|....+++++|+. |+..+++.++++.
T Consensus 335 VgNaaEh~~AI~fA~k~kldLs--------lgVaigsalQI~Lf~vP~~v~v~W~~g~~M~LnF~~~et~~l~isVfl~~ 406 (441)
T KOG1397|consen 335 VGNAAEHAGAISFAMKDKLDLS--------LGVAIGSALQIALFVVPFSVIVGWIMGISMDLNFPLLETACLFISVFLVA 406 (441)
T ss_pred cCchHHhhcceeeeecCcccch--------hhhhhhhhHhHHHhhhhHHHHhhhhcCCceEEeccHHHHHHHHHHHHHHH
Confidence 9999999999999999999999 999999999977 55899999999999998 8888777777777
Q ss_pred HHHhcCCccchHHHHHHHHHHHHHHHHHH
Q 048038 554 AFASFRTNFPLWTCSIAYALYPFSLALVY 582 (591)
Q Consensus 554 ~~~~~r~~~~~~~~~~~~~lY~~sl~lv~ 582 (591)
++. ..++-.+..|.+++++|.+..+-.|
T Consensus 407 y~l-qdG~Sny~kG~mLll~Y~Iia~~Ff 434 (441)
T KOG1397|consen 407 YLL-QDGKSNYFKGLMLLLCYLIIAAGFF 434 (441)
T ss_pred HHH-hcCchhHHHHHHHHHHHHHHHHHhh
Confidence 665 4777788999999999965544443
No 2
>TIGR00378 cax calcium/proton exchanger (cax).
Probab=100.00 E-value=2.4e-37 Score=327.55 Aligned_cols=318 Identities=21% Similarity=0.319 Sum_probs=246.4
Q ss_pred hhHHHHHHHHHHH-HHHHhHHHHHHHHHHHHhCCCccchhHHhhhcchhHHHHHHHhhcccchhhhhccceeehhhhhhH
Q 048038 87 GNLFLIIVYGYLM-YVAATYLSNGSELLLEILGPGVVGGLFLPILGALPDAMLILVSGLSGTKETAQSQVSVGMGLLAGS 165 (591)
Q Consensus 87 g~~fli~v~g~ll-~~~a~~l~~g~e~L~~~lgp~iiG~~i~~~lgslPE~~i~l~s~l~~~~~~a~~~v~v~~G~l~GS 165 (591)
.+-.++|+++++. +|+|+++++++|.+|+++| ..+||++++.+||+||+++.+ .+..+++.++++|+++||
T Consensus 16 ~~~~~~F~~~~~aiipla~~l~~~~~~lA~~~g-~~vggl~~~~~gt~pEL~vsi-------~A~~~g~~~i~~gnivGS 87 (349)
T TIGR00378 16 WSHTLTFLFNFLAIIPLAAIMGNATEELADKAG-PTIGGLLNATFGNAVELIVSI-------IALKEGLVRIVQASLTGS 87 (349)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-chHHHHHHHhhccHHHHHHHH-------HHHHcCChhhhHHHHHHH
Confidence 3456888999998 9999999999999999999 567999999999999999944 455566777999999999
Q ss_pred HHHHHHHHHHHHhhhcccccccCccccccCCccccccccccceeecccchhhhHHHHHHHHHHHHHHhhhhhcccc---c
Q 048038 166 TVMLSTVIWGTCVVVGKCDLRESDSVAIDGQNTKGFRLTGTGVSTDVWTCYAARIMAISVIPFVVVQLPQMLNSTS---G 242 (591)
Q Consensus 166 ~i~~ltli~G~~~l~g~~~~~~~~~~~~~~~~~~~f~~~~~gv~~~~~~~~~a~im~ls~~~~li~~lp~~~~~~~---~ 242 (591)
|++|+++++|+|+++|+++.++| .|+..+++. ...+|+++++.++ +|+.++..+ .
T Consensus 88 ~i~NllLilGls~liggl~~~~q-----------~~~~~~a~~--------~~~ll~la~~~l~---lp~~~~~~~~~~~ 145 (349)
T TIGR00378 88 LLGNLLLVLGLCFFFGGLNYKQQ-----------TFNQTAART--------NSSLLAIACVALL---IPAARATLSHGKE 145 (349)
T ss_pred HHHhHHHHHHHHHHHhcccccee-----------ecCHHHHHH--------HHHHHHHHHHHHH---hhhHHHhcCCCcc
Confidence 99999999999999999999887 566655444 5778888887777 776654322 1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhccchhhhHHHHHHhhhhhhhhcccCCcccHHHHHHHhhhhcCC
Q 048038 243 RHLAVLIALILSVSMLISYCLYQVFQPWIQKRRLAFAKHKHVISGILKHLRQRALGRLLTDSGEPNIDVIKKLFDAIDEN 322 (591)
Q Consensus 243 ~~~~~~is~ivsv~lli~Ysayq~lhpWiq~~~~~~~~~~~l~~~il~~lk~~~l~~l~~~~~~~~~~~Lr~lF~~iD~n 322 (591)
......+++..+++++..|.+|..++-+-+++..+ ++
T Consensus 146 ~~~~~~ls~~~aiill~lY~~~L~~~l~~h~~~f~--~~----------------------------------------- 182 (349)
T TIGR00378 146 DGKILNLSRGTSIVIIIVYVLFLYFQLGTHHALYE--QQ----------------------------------------- 182 (349)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhC--Cc-----------------------------------------
Confidence 22344689999999999999998764322111000 00
Q ss_pred CCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHHHHHHHhhhcCCCCCCCCCCCCccc
Q 048038 323 KDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEKWLNEAMQARTGSADPGPHTMKFLD 402 (591)
Q Consensus 323 ~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~~~~~~k~~~~~~~~~~~~~~~~~~ 402 (591)
+
T Consensus 183 --------------------------------------------------------------~----------------- 183 (349)
T TIGR00378 183 --------------------------------------------------------------E----------------- 183 (349)
T ss_pred --------------------------------------------------------------c-----------------
Confidence 0
Q ss_pred cccchhhhhhhhcCCccccchhccccCCCcchHHHHHHHHHHHHHHHHhhHHHHHHhHHHHHHhcCCCchhhhhhhhhcc
Q 048038 403 DFHLQTKREHALLGAEEESDEVAEGVENPKWVSFKAVLMLLIGTIIAAAFADPLVDAVDNFSAATSIPSFFISFIALPFA 482 (591)
Q Consensus 403 ~~~~~~~~e~~~l~~e~~~~e~~~~~~~~~~~~~~~v~~Ll~g~~~~~~~A~~lV~si~~~a~~~gIs~~~Is~iilPla 482 (591)
+++ + +. +|+.++.+.++|+.++++.++++|++++++.|+++|++++.+++.+|+|+.|+|++++|++
T Consensus 184 -------~~~----~-~~-~~~~~~~~~~~~~~~~~~~~L~~~~v~i~~~a~~lv~~~~~~~~~~gi~~~~igl~iva~~ 250 (349)
T TIGR00378 184 -------AET----D-EV-METIERNPHHSLSVKSSTVVLLGTTVIVAFCSEFLVGTIDNVVESTGLSKLFIGVIVIPIV 250 (349)
T ss_pred -------ccc----c-cc-cccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHh
Confidence 000 0 00 0001111113356678888899999999999999999999999999999999999999999
Q ss_pred ccchhHHHHHHHHHhccccccccccchhhhhhhHHHHHHHH-------HHHHHHHhcCcccccch-hHHHHHHHHHHHHH
Q 048038 483 TNSSEAVSAIIFASRKKIRTASLTFSELYGAVTMNNILCLS-------VFLALVYARGLTWDFSS-EVLVILIVCLVMGA 554 (591)
Q Consensus 483 ts~~E~vsai~~A~k~k~~~as~t~s~i~g~v~m~n~l~l~-------vfl~lv~~r~l~w~fs~-evlvil~v~~~~~~ 554 (591)
||+||.++|+.+|+|||.+++ .+.++|+.++.. ++++|+..+|+++.|+. |+..++++++++..
T Consensus 251 tslpE~~~ai~aa~~~~~~~a--------i~~~~GS~i~~~l~v~p~lvl~~~~~~~~~~L~f~~~~~~~l~~~v~~~~~ 322 (349)
T TIGR00378 251 GNAAEHATAVLVAMKDKMDLA--------LGVAIGSSLQIALFVAPVLVIVGWMIDVPMTLNFSTFELVALFIAVLLSNY 322 (349)
T ss_pred cccHHHHHHHHHHHcCCcccH--------HHHHHhHHHHHHHHHHHHHHHHHHHhCCCceecCcHHHHHHHHHHHHHHHH
Confidence 999999999999999999999 777777665433 44788889999999997 87777777665555
Q ss_pred HHhcCCccchHHHHHHHHHHHHHH
Q 048038 555 FASFRTNFPLWTCSIAYALYPFSL 578 (591)
Q Consensus 555 ~~~~r~~~~~~~~~~~~~lY~~sl 578 (591)
+ ..+++.++.+|.+++++|.+..
T Consensus 323 ~-~~dg~~n~leG~~ll~~Y~i~~ 345 (349)
T TIGR00378 323 I-SLDGESNWLEGVMLLAMYIIIA 345 (349)
T ss_pred H-HhCCCCcHHHHHHHHHHHHHHH
Confidence 4 4577789999999999996653
No 3
>TIGR00846 caca2 calcium/proton exchanger. This model is generated from the calcium ion/proton exchangers of the CacA family.
Probab=100.00 E-value=1.3e-35 Score=315.77 Aligned_cols=318 Identities=22% Similarity=0.316 Sum_probs=229.5
Q ss_pred hhHHHHHHHHHHH-HHHHhHHHHHHHHHHHHhCCCccchhHHhhhcchhHHHHHHHhhcccchhhhhccceeehhhhhhH
Q 048038 87 GNLFLIIVYGYLM-YVAATYLSNGSELLLEILGPGVVGGLFLPILGALPDAMLILVSGLSGTKETAQSQVSVGMGLLAGS 165 (591)
Q Consensus 87 g~~fli~v~g~ll-~~~a~~l~~g~e~L~~~lgp~iiG~~i~~~lgslPE~~i~l~s~l~~~~~~a~~~v~v~~G~l~GS 165 (591)
.+-.++|+.|+++ +++|+++++++|.+|+++|.. +|+++++++||+||+++.+.+.. +++.++++|+++||
T Consensus 34 ~~~~~~F~~~~~~li~~a~~lv~~a~~lA~~~G~~-vG~ll~a~~ts~pEL~vsi~A~~-------~g~~~la~gnivGS 105 (365)
T TIGR00846 34 WSQTVIFLLNLLGIIPLAERVSFATEQLAHRLGPT-LGGLLNATFGNAVELIISLMALG-------EGKVEVVRASLLGS 105 (365)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-hhhHHHHHHhHHHHHHHHHHHcc-------CCcHHHHHHHHHHH
Confidence 3445788889988 999999999999999999944 89999999999999999665554 45566999999999
Q ss_pred HHHHHHHHHHHHhhhcccccc-cCccccccCCccccccccccceeecccchhhhHHHHHHHHHHHHHHhhhhhccc-cch
Q 048038 166 TVMLSTVIWGTCVVVGKCDLR-ESDSVAIDGQNTKGFRLTGTGVSTDVWTCYAARIMAISVIPFVVVQLPQMLNST-SGR 243 (591)
Q Consensus 166 ~i~~ltli~G~~~l~g~~~~~-~~~~~~~~~~~~~~f~~~~~gv~~~~~~~~~a~im~ls~~~~li~~lp~~~~~~-~~~ 243 (591)
+++|+++++|+|+++|+.+.+ +| .|+.... .+...+|.++++.++ +|.+++.. .+.
T Consensus 106 ~i~NilLIlGl~~l~~~~~~~~~~-----------~~~~~~~--------~~~~~ll~~~~~~l~---lp~~~~~~~~~~ 163 (365)
T TIGR00846 106 ILSNLLLVLGLSLFLGGIKNIREQ-----------RFNRGAA--------QVNSALLLLAILSLV---LPLALPAGKPGQ 163 (365)
T ss_pred HHHHHHHHHHHHHHHhccCcccee-----------eccHHHH--------HHHHHHHHHHHHHHH---hhhHHhhcCCCc
Confidence 999999999999999999873 44 2333222 224456666666555 67654322 223
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhccchhhhHHHHHHhhhhhhhhcccCCcccHHHHHHHhhhhcCCC
Q 048038 244 HLAVLIALILSVSMLISYCLYQVFQPWIQKRRLAFAKHKHVISGILKHLRQRALGRLLTDSGEPNIDVIKKLFDAIDENK 323 (591)
Q Consensus 244 ~~~~~is~ivsv~lli~Ysayq~lhpWiq~~~~~~~~~~~l~~~il~~lk~~~l~~l~~~~~~~~~~~Lr~lF~~iD~n~ 323 (591)
+....+++..++++++.|.+|..++-+ .|++ .|+. .
T Consensus 164 ~~~~~ls~~~giill~ly~~yl~~~~~---------~~~~-------------------------------~f~~--~-- 199 (365)
T TIGR00846 164 DSILGLSRGIAIVMLILYGAFLVFQLV---------THRQ-------------------------------LFEP--Q-- 199 (365)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhc---------cchh-------------------------------cccc--c--
Confidence 344568999999999999999766421 1100 0000 0
Q ss_pred CCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccc
Q 048038 324 DERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEKWLNEAMQARTGSADPGPHTMKFLDD 403 (591)
Q Consensus 324 DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~~~~~~k~~~~~~~~~~~~~~~~~~~ 403 (591)
+
T Consensus 200 -------------------------------------------------------------~------------------ 200 (365)
T TIGR00846 200 -------------------------------------------------------------E------------------ 200 (365)
T ss_pred -------------------------------------------------------------c------------------
Confidence 0
Q ss_pred ccchhhhhhhhcCCccccchhccccCCC-cchHHHHHHHHHHHHHHHHhhHHHHHHhHHHHHHhcCCCchhhhhhhhhcc
Q 048038 404 FHLQTKREHALLGAEEESDEVAEGVENP-KWVSFKAVLMLLIGTIIAAAFADPLVDAVDNFSAATSIPSFFISFIALPFA 482 (591)
Q Consensus 404 ~~~~~~~e~~~l~~e~~~~e~~~~~~~~-~~~~~~~v~~Ll~g~~~~~~~A~~lV~si~~~a~~~gIs~~~Is~iilPla 482 (591)
++. +++++| +++++ +++.++++..+++|+++++.+|+++|++++.+++++|+|+.|+|++++|++
T Consensus 201 ------~~~-----~~~~~~---~~~~~~~~~~~~~i~~l~~~~~~l~~~a~~lv~~~~~ia~~~gis~~~iGl~lvai~ 266 (365)
T TIGR00846 201 ------EAD-----SDYDDE---VHEEPTVISPWSAAAWLVGATIVVALLAEYLVDTIESAVESWGLSVAFIGVILAPIV 266 (365)
T ss_pred ------ccc-----cccccc---cccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHh
Confidence 000 000000 01112 355678899999999999999999999999999999999999999999999
Q ss_pred ccchhHHHHHHHHHhccccccccccchhhhhhhHH-HHHHHH------HHHHHHHhcCcccccch-hHHHHHHHHHHHHH
Q 048038 483 TNSSEAVSAIIFASRKKIRTASLTFSELYGAVTMN-NILCLS------VFLALVYARGLTWDFSS-EVLVILIVCLVMGA 554 (591)
Q Consensus 483 ts~~E~vsai~~A~k~k~~~as~t~s~i~g~v~m~-n~l~l~------vfl~lv~~r~l~w~fs~-evlvil~v~~~~~~ 554 (591)
||+||.++|+.+|+|||.+++ .+.++| |+.++. ++++|+..++++..|+. |...+++.++++ .
T Consensus 267 tslpE~~~si~aa~~g~~~la--------vg~~iGSni~n~l~vl~~~~li~~~~~~~~~l~~~~~~~~~l~~s~~~~-~ 337 (365)
T TIGR00846 267 GNAAEHAGAVIAAFKNKLDIA--------LGVALGSALQIALFVVPVVVLVAWMLGIPMDLNFGAPETVALALSVFLT-T 337 (365)
T ss_pred cccHHHHHHHHHHHcCCcchH--------HHHHHHHHHHHHHHHHHHHHHHHHhcCCceeccCcHHHHHHHHHHHHHH-H
Confidence 999999999999999999999 444444 333332 22344445667777775 654444444333 3
Q ss_pred HHhcCCccchHHHHHHHHHHHHHHHH
Q 048038 555 FASFRTNFPLWTCSIAYALYPFSLAL 580 (591)
Q Consensus 555 ~~~~r~~~~~~~~~~~~~lY~~sl~l 580 (591)
+...+++.+|++|.+++++|.+++..
T Consensus 338 ~~~~~~~~~~~eG~~ll~~Y~~~~~~ 363 (365)
T TIGR00846 338 ITLQDGRSNYLEGAVLLALYIIIAML 363 (365)
T ss_pred HHHcCCcCcHHHHHHHHHHHHHHHHH
Confidence 34457789999999999999888764
No 4
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6e-34 Score=294.45 Aligned_cols=321 Identities=22% Similarity=0.349 Sum_probs=259.0
Q ss_pred HHHHHHHH-HHHHhHHHHHHHHHHHHhCCCccchhHHhhhcchhHHHHHHHhhcccchhhhhccceeehhhhhhHHHHHH
Q 048038 92 IIVYGYLM-YVAATYLSNGSELLLEILGPGVVGGLFLPILGALPDAMLILVSGLSGTKETAQSQVSVGMGLLAGSTVMLS 170 (591)
Q Consensus 92 i~v~g~ll-~~~a~~l~~g~e~L~~~lgp~iiG~~i~~~lgslPE~~i~l~s~l~~~~~~a~~~v~v~~G~l~GS~i~~l 170 (591)
+|+.+.++ ++.|.++++++|.+|.+.|+ -+|++++++++++.|.+++.+...+| +..++.+++.||++.|+
T Consensus 38 ~fi~~~l~i~plA~~v~~aaE~lA~~vG~-~~G~Lina~f~~~iEvil~~~al~~G-------~~~lvr~Si~gsIm~~~ 109 (368)
T COG0387 38 IFIAALLAIIPLAFSVVRAAEVLAARVGE-PYGSLINALFGNAIEVILIVAALKSG-------SPTLVRDSLYGSIMINL 109 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCC-chhHHHHHHHHHHHHHHHHHHHHhCC-------CchhhHHHHHHHHHHHH
Confidence 34445555 88999999999999999994 56999999999999999976665555 55589999999999999
Q ss_pred HHHHHHHhhhcccccccCccccccCCccccccccccceeecccchhhhHHHHHHHHHHHHHHhhhhhccccchhHHHHHH
Q 048038 171 TVIWGTCVVVGKCDLRESDSVAIDGQNTKGFRLTGTGVSTDVWTCYAARIMAISVIPFVVVQLPQMLNSTSGRHLAVLIA 250 (591)
Q Consensus 171 tli~G~~~l~g~~~~~~~~~~~~~~~~~~~f~~~~~gv~~~~~~~~~a~im~ls~~~~li~~lp~~~~~~~~~~~~~~is 250 (591)
+++.|.|+++|+.++++| .||..+++. |.+.+....++.++ +|.++..+.+......++
T Consensus 110 llv~GlslllGglr~~~Q-----------~fN~~~a~~-------~~~~L~~~~~ialv---~P~~~~~~~~~~~~~~~s 168 (368)
T COG0387 110 LLVVGLSLLLGGLRHKTQ-----------PFNPHGAGT-------YLALLFTAATIALV---LPTFFPYTGGGNFSLGQS 168 (368)
T ss_pred HHHHHHHHHHcchhhcee-----------ecchhhHHH-------HHHHHHHHHHHHhh---hhhhhcccCCCcchHhHH
Confidence 999999999999999998 899999876 34434444477777 999998777777778999
Q ss_pred HHHHHHHHHHHHHHHhHhHHHHHHHhhhhccchhhhHHHHHHhhhhhhhhcccCCcccHHHHHHHhhhhcCCCCCCcCHH
Q 048038 251 LILSVSMLISYCLYQVFQPWIQKRRLAFAKHKHVISGILKHLRQRALGRLLTDSGEPNIDVIKKLFDAIDENKDERLSAS 330 (591)
Q Consensus 251 ~ivsv~lli~Ysayq~lhpWiq~~~~~~~~~~~l~~~il~~lk~~~l~~l~~~~~~~~~~~Lr~lF~~iD~n~DG~Is~~ 330 (591)
..+++++...|.....++. + +|++ ++.+.
T Consensus 169 ~~~avv~i~~Y~lfL~fql----~-----tH~~----------------~f~~~-------------------------- 197 (368)
T COG0387 169 LFVAVVLIALYGLFLFFQL----K-----THAS----------------LFWQV-------------------------- 197 (368)
T ss_pred HHHHHHHHHHHHHHHHhhh----h-----hhhh----------------hhccc--------------------------
Confidence 9999999999998865532 2 1210 00000
Q ss_pred HHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHHHHHHHhhhcCCCCCCCCCCCCccccccchhhh
Q 048038 331 ELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEKWLNEAMQARTGSADPGPHTMKFLDDFHLQTKR 410 (591)
Q Consensus 331 ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (591)
.
T Consensus 198 -------------------------------------------------------------------------------~ 198 (368)
T COG0387 198 -------------------------------------------------------------------------------H 198 (368)
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred hhhhcCCccccchhccccCCCcchHHHHHHHHHHHHHHHHhhHHHHHHhHHHHHHhcCCCchhhhhhhhhccccchhHHH
Q 048038 411 EHALLGAEEESDEVAEGVENPKWVSFKAVLMLLIGTIIAAAFADPLVDAVDNFSAATSIPSFFISFIALPFATNSSEAVS 490 (591)
Q Consensus 411 e~~~l~~e~~~~e~~~~~~~~~~~~~~~v~~Ll~g~~~~~~~A~~lV~si~~~a~~~gIs~~~Is~iilPlats~~E~vs 490 (591)
+++. +.+|+++..++.++|+.+++..+|+.+++.++..||.++.+++...+++|.|+.|+|++++|+.+|+||+++
T Consensus 199 ~~e~----~~ee~~~h~~~~~~~s~~~s~~vLl~~tv~v~~lae~lv~~le~~l~~~g~~~~F~G~iIa~lVgn~~E~~t 274 (368)
T COG0387 199 EAEG----EAEEDDPHHDDPSKWSVLLSTGVLLIATVLVALLAEILVGSLEAVLESLGAPPAFVGLIIAALVGNAPEHLT 274 (368)
T ss_pred cccc----cCCCCCCCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhccCHHHHH
Confidence 0000 111222233455789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccccccccccchhhhhhhHHHHHHHHH-------HHHHHHhcCcccccchhHHHHHHHHHHHHHHHhcCCccc
Q 048038 491 AIIFASRKKIRTASLTFSELYGAVTMNNILCLSV-------FLALVYARGLTWDFSSEVLVILIVCLVMGAFASFRTNFP 563 (591)
Q Consensus 491 ai~~A~k~k~~~as~t~s~i~g~v~m~n~l~l~v-------fl~lv~~r~l~w~fs~evlvil~v~~~~~~~~~~r~~~~ 563 (591)
|+++|+|+|++++ .++++|+.+++.. ..+|.+.+|++..|.+--++++++++++....+..++-+
T Consensus 275 Ai~aA~~~~mqls--------~nia~Gsalq~~lltiP~lvlis~~~gqpm~l~~~~~elV~l~~~v~~~~~~~sdG~sn 346 (368)
T COG0387 275 ALRAALNNRMQLS--------MNIAMGSALQTALLTIPVLVLISLFTGQPLTLGFGPPELVLLVVTVFLANILFSDGRTN 346 (368)
T ss_pred HHHHHHhccHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccCCHHHHHHHHHHHHHHHHhcCCCchH
Confidence 9999999999999 9999999998764 478889999999999844555555555555555677778
Q ss_pred hHHHHHHHHHHHHHHHHHHH
Q 048038 564 LWTCSIAYALYPFSLALVYV 583 (591)
Q Consensus 564 ~~~~~~~~~lY~~sl~lv~~ 583 (591)
+.+|.+.+++|..+....++
T Consensus 347 ~leG~~lL~lya~~~~~ff~ 366 (368)
T COG0387 347 WLEGVVLLALYAIYAMLFFF 366 (368)
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 99999999999888877664
No 5
>PRK10734 putative calcium/sodium:proton antiporter; Provisional
Probab=100.00 E-value=3.2e-31 Score=277.91 Aligned_cols=307 Identities=19% Similarity=0.236 Sum_probs=213.2
Q ss_pred HHHHHHHHH-HHHHhHHHHHHHHHHHHhC--CCccchhHHhhhcchhHHHHHHHhhcccchhhhhccceeehhhhhhHHH
Q 048038 91 LIIVYGYLM-YVAATYLSNGSELLLEILG--PGVVGGLFLPILGALPDAMLILVSGLSGTKETAQSQVSVGMGLLAGSTV 167 (591)
Q Consensus 91 li~v~g~ll-~~~a~~l~~g~e~L~~~lg--p~iiG~~i~~~lgslPE~~i~l~s~l~~~~~~a~~~v~v~~G~l~GS~i 167 (591)
+.++.|+++ ++++++++++++.+++++| |.++|.++.+++||+||+++.+.+.+ +++.++++|+++|||+
T Consensus 6 ~~~~~gl~~l~~ga~~lv~~~~~ia~~lgis~~viG~tiva~gTSlPEl~vsv~A~~-------~g~~~ia~GnilGSni 78 (325)
T PRK10734 6 ALLIIGLLLLVYGADRLVFAASILCRTFGIPPLIIGMTVVGIGTSLPEIIVSVAASL-------HGQRDLAVGTALGSNI 78 (325)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcchhHHHHHHHHHH-------cCCCcchhhhhhhHHH
Confidence 345667777 9999999999999999999 46999999999999999999666555 4566799999999999
Q ss_pred HHHHHHHHHHhhhcccccccCccccccCCccccccccccceeecccchhhhHHHHHHHHHHHHHHhhhhhccccchhHHH
Q 048038 168 MLSTVIWGTCVVVGKCDLRESDSVAIDGQNTKGFRLTGTGVSTDVWTCYAARIMAISVIPFVVVQLPQMLNSTSGRHLAV 247 (591)
Q Consensus 168 ~~ltli~G~~~l~g~~~~~~~~~~~~~~~~~~~f~~~~~gv~~~~~~~~~a~im~ls~~~~li~~lp~~~~~~~~~~~~~ 247 (591)
+|++++.|++.++++.+.+.+ . .+++...|+.+.+.+..+ . .+ +
T Consensus 79 ~ni~lilg~~~l~~~~~~~~~-----------~-------------~~~~~~~ll~~~~~~~~~-~---~~---~----- 122 (325)
T PRK10734 79 TNILLILGLAALIRPFTVHSD-----------V-------------LRRELPLMLLVSVLAGSV-L---YD---G----- 122 (325)
T ss_pred HHHHHHHHHHHHhCCcccChH-----------H-------------HHHHHHHHHHHHHHHHHH-H---HC---C-----
Confidence 999999999999987655432 0 122334444433222211 1 11 1
Q ss_pred HHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhccchhhhHHHHHHhhhhhhhhcccCCcccHHHHHHHhhhhcCCCCCCc
Q 048038 248 LIALILSVSMLISYCLYQVFQPWIQKRRLAFAKHKHVISGILKHLRQRALGRLLTDSGEPNIDVIKKLFDAIDENKDERL 327 (591)
Q Consensus 248 ~is~ivsv~lli~Ysayq~lhpWiq~~~~~~~~~~~l~~~il~~lk~~~l~~l~~~~~~~~~~~Lr~lF~~iD~n~DG~I 327 (591)
.++++.+++++..|.+|.++.-+..+++ + ++ .
T Consensus 123 ~l~~~~g~~ll~~~~~yl~~~~~~~~~~-~--~~---------------------~------------------------ 154 (325)
T PRK10734 123 QLSRSDGIFLLLLAVLWLLFIVKIARLA-E--RQ---------------------G------------------------ 154 (325)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHhc-c--cc---------------------c------------------------
Confidence 3567788888888888866532111100 0 00 0
Q ss_pred CHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHHHHHHHhhhcCCCCCCCCCCCCccccccch
Q 048038 328 SASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEKWLNEAMQARTGSADPGPHTMKFLDDFHLQ 407 (591)
Q Consensus 328 s~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~ 407 (591)
T Consensus 155 -------------------------------------------------------------------------------- 154 (325)
T PRK10734 155 -------------------------------------------------------------------------------- 154 (325)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhhhcCCccccchhccccCCCcchHHHHHHHHHHHHHHHHhhHHHHHHhHHHHHHhcCCCchhhhhhhhhccccchh
Q 048038 408 TKREHALLGAEEESDEVAEGVENPKWVSFKAVLMLLIGTIIAAAFADPLVDAVDNFSAATSIPSFFISFIALPFATNSSE 487 (591)
Q Consensus 408 ~~~e~~~l~~e~~~~e~~~~~~~~~~~~~~~v~~Ll~g~~~~~~~A~~lV~si~~~a~~~gIs~~~Is~iilPlats~~E 487 (591)
+++ ++++++++.. +..+..+...++++|.+++.+.++++|++++.+++.+|+|+.++|++++|+|||+||
T Consensus 155 --~~~------~~~~~~~~~~--~~~~~~~~~~~l~~g~~~l~~gs~~lv~~~~~ia~~lgis~~~iG~tiva~gtslPE 224 (325)
T PRK10734 155 --NDS------LTREQLAELP--REGGLPVAFLWLGIALIIMPMATRMVIDNATVLANYFAISELTIGLTVIAIGTSLPE 224 (325)
T ss_pred --ccc------cchhhhcccc--ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHhccHHH
Confidence 000 0000000000 011234677888899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccccccccccchhhhhhhHHHHHHHHHHHHH-HHhcCccc---ccchhHHHHHHHHHHHHHHHh-cCCcc
Q 048038 488 AVSAIIFASRKKIRTASLTFSELYGAVTMNNILCLSVFLAL-VYARGLTW---DFSSEVLVILIVCLVMGAFAS-FRTNF 562 (591)
Q Consensus 488 ~vsai~~A~k~k~~~as~t~s~i~g~v~m~n~l~l~vfl~l-v~~r~l~w---~fs~evlvil~v~~~~~~~~~-~r~~~ 562 (591)
.++|+.+++|||.+++ .|++..+|++++.+.++. ..+++... .+..+..+++.+++++..... .+++.
T Consensus 225 ~~~sv~a~~~g~~~~a-------vgniiGsnifni~~~lg~~~l~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 297 (325)
T PRK10734 225 LATAIAGARKGENDIA-------VGNIIGSNIFNIVIVLGLPALISPGEINPLAFSRDYWVMLLVSVIFALLCWRRKRRI 297 (325)
T ss_pred HHHHHHHHHcCCCchH-------HHHHHhHHHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 9999999999999999 444444466666655544 23444322 123355555555554333332 45679
Q ss_pred chHHHHHHHHHHHHHHHHHHHHH
Q 048038 563 PLWTCSIAYALYPFSLALVYVLD 585 (591)
Q Consensus 563 ~~~~~~~~~~lY~~sl~lv~~l~ 585 (591)
.||+|.+++.+|..|+...+++-
T Consensus 298 ~r~~G~~Ll~~Y~~y~~~l~~~~ 320 (325)
T PRK10734 298 GRGAGALLLGGFIVWLAMLYWLS 320 (325)
T ss_pred ChHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999998888653
No 6
>COG0530 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]
Probab=99.98 E-value=1.5e-30 Score=271.35 Aligned_cols=301 Identities=21% Similarity=0.315 Sum_probs=232.6
Q ss_pred HHHHHHHHHHH-HHHHhHHHHHHHHHHHHhC--CCccchhHHhhhcchhHHHHHHHhhcccchhhhhccceeehhhhhhH
Q 048038 89 LFLIIVYGYLM-YVAATYLSNGSELLLEILG--PGVVGGLFLPILGALPDAMLILVSGLSGTKETAQSQVSVGMGLLAGS 165 (591)
Q Consensus 89 ~fli~v~g~ll-~~~a~~l~~g~e~L~~~lg--p~iiG~~i~~~lgslPE~~i~l~s~l~~~~~~a~~~v~v~~G~l~GS 165 (591)
.++.++.++++ +.+|++++++++.+++++| +.++|+++++++||+||+++.++|.+.|.++ +++|+++||
T Consensus 11 ~~~~~i~~l~llv~~ad~lv~~a~~Is~~~gi~~~~iG~tiva~gTslPE~~vs~~a~l~g~~~-------iavGnvlGS 83 (320)
T COG0530 11 LILLLIAGLILLVKGADLLVDAASAISRRFGISELIIGLTIVAFGTSLPELAVSLVAALSGNPD-------IAVGNVLGS 83 (320)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHccChHHHHHHHHHHcCCCC-------eeeehhhhH
Confidence 34566777777 9999999999999999999 4599999999999999999988888877655 999999999
Q ss_pred HHHHHHHHHHHHhhhcccccccCccccccCCccccccccccceeecccchhhhHHHHHHHHHHHHHHhhhhhccccchhH
Q 048038 166 TVMLSTVIWGTCVVVGKCDLRESDSVAIDGQNTKGFRLTGTGVSTDVWTCYAARIMAISVIPFVVVQLPQMLNSTSGRHL 245 (591)
Q Consensus 166 ~i~~ltli~G~~~l~g~~~~~~~~~~~~~~~~~~~f~~~~~gv~~~~~~~~~a~im~ls~~~~li~~lp~~~~~~~~~~~ 245 (591)
|++|+++++|++.++.+.+.++. ..+++..+|+++.+.+..+.. ..
T Consensus 84 ni~ni~li~gl~ali~~~~~~~~------------------------~~~r~~~f~ll~~~~~~~~~~---~~------- 129 (320)
T COG0530 84 NIFNILLILGLAALIAPLKVDSD------------------------VLRREIPFLLLATLILLLVLL---DG------- 129 (320)
T ss_pred HHHHHHHHHHHHHHHhhhHhhhh------------------------HHHHhhHHHHHHHHHHHHHHH---cC-------
Confidence 99999999999999977766542 235577777777666662222 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhccchhhhHHHHHHhhhhhhhhcccCCcccHHHHHHHhhhhcCCCCC
Q 048038 246 AVLIALILSVSMLISYCLYQVFQPWIQKRRLAFAKHKHVISGILKHLRQRALGRLLTDSGEPNIDVIKKLFDAIDENKDE 325 (591)
Q Consensus 246 ~~~is~ivsv~lli~Ysayq~lhpWiq~~~~~~~~~~~l~~~il~~lk~~~l~~l~~~~~~~~~~~Lr~lF~~iD~n~DG 325 (591)
.++++.++.++..|..|-.+--+.+++.
T Consensus 130 --~~~~~~gi~ll~l~~~yl~~~~~~~~~~-------------------------------------------------- 157 (320)
T COG0530 130 --HLSRLDGIVLLLLYVLYLYYLLKLSREA-------------------------------------------------- 157 (320)
T ss_pred --CccHHHHHHHHHHHHHHHHHHHHhhhhc--------------------------------------------------
Confidence 3556688889999998875521100000
Q ss_pred CcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHHHHHHHhhhcCCCCCCCCCCCCcccccc
Q 048038 326 RLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEKWLNEAMQARTGSADPGPHTMKFLDDFH 405 (591)
Q Consensus 326 ~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~ 405 (591)
T Consensus 158 -------------------------------------------------------------------------------- 157 (320)
T COG0530 158 -------------------------------------------------------------------------------- 157 (320)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred chhhhhhhhcCCccccchhccccCCCcchHHHHHHHHHHHHHHHHhhHHHHHHhHHHHHHhcCCCchhhhhhhhhccccc
Q 048038 406 LQTKREHALLGAEEESDEVAEGVENPKWVSFKAVLMLLIGTIIAAAFADPLVDAVDNFSAATSIPSFFISFIALPFATNS 485 (591)
Q Consensus 406 ~~~~~e~~~l~~e~~~~e~~~~~~~~~~~~~~~v~~Ll~g~~~~~~~A~~lV~si~~~a~~~gIs~~~Is~iilPlats~ 485 (591)
+ +++|+++|. +.+.+..+....++.|.+.+.+.++.+|+++.++|+.+|+||.++|++++|+|||.
T Consensus 158 -----~-------~~~~~~~e~--~~~~~~~~~~~~~~~~~~~l~~g~~llv~~~~~iA~~~gi~e~~igltivaigTSl 223 (320)
T COG0530 158 -----E-------EPGEQENER--PKKGSLRKALLVLVIGLILLVVGSELLVDGAVEIAEIFGISELIIGLTIVAIGTSL 223 (320)
T ss_pred -----c-------ccccccccc--cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHccc
Confidence 0 000000000 01344568999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHhccccccccccchhhhhhhHHHHHHHHHHHHHH-HhcCccc---ccchhHHHHHHHHHHHHHH-HhcCC
Q 048038 486 SEAVSAIIFASRKKIRTASLTFSELYGAVTMNNILCLSVFLALV-YARGLTW---DFSSEVLVILIVCLVMGAF-ASFRT 560 (591)
Q Consensus 486 ~E~vsai~~A~k~k~~~as~t~s~i~g~v~m~n~l~l~vfl~lv-~~r~l~w---~fs~evlvil~v~~~~~~~-~~~r~ 560 (591)
||.++++.+++|||.+++ .|+++.+|++++.+.+|.. ..+|.+- .+..+..+++.++++.-.+ ..+|+
T Consensus 224 PElv~si~a~rkg~~~ia-------vGnviGSni~n~~~~lGi~~~~~~~~~~~~~~~~~~~vmi~~~l~l~l~~~~~~~ 296 (320)
T COG0530 224 PELVVSIVAARKGEDDIA-------VGNVIGSNIFNILIVLGISALIGPITVEPSALLVDAPVLILVTLLLLLFLARRRR 296 (320)
T ss_pred HHHHHHHHHHHcCCCCeE-------EeeecchHHHHHHHHHhHHHhccccccCchhHHHHHHHHHHHHHHHHHHHHhccC
Confidence 999999999999999999 6666666888888777773 5555322 2334777887777766666 47899
Q ss_pred ccchHHHHHHHHHHHHHHHHHHH
Q 048038 561 NFPLWTCSIAYALYPFSLALVYV 583 (591)
Q Consensus 561 ~~~~~~~~~~~~lY~~sl~lv~~ 583 (591)
+..+|+|..++..|+.+.++.++
T Consensus 297 ~i~r~~g~~ll~~Y~~~~~~~~~ 319 (320)
T COG0530 297 RIGRKEGLLLLGLYIVYVALLIL 319 (320)
T ss_pred cchhHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999888877653
No 7
>TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein. This alignment models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat.
Probab=99.97 E-value=4.4e-29 Score=260.50 Aligned_cols=299 Identities=21% Similarity=0.268 Sum_probs=211.9
Q ss_pred hHHHHHHHHHHH-HHHHhHHHHHHHHHHHHhC--CCccchhHHhhhcchhHHHHHHHhhcccchhhhhccceeehhhhhh
Q 048038 88 NLFLIIVYGYLM-YVAATYLSNGSELLLEILG--PGVVGGLFLPILGALPDAMLILVSGLSGTKETAQSQVSVGMGLLAG 164 (591)
Q Consensus 88 ~~fli~v~g~ll-~~~a~~l~~g~e~L~~~lg--p~iiG~~i~~~lgslPE~~i~l~s~l~~~~~~a~~~v~v~~G~l~G 164 (591)
|++..+..++.+ ++++++++++.+.+++++| +.++|.++++++||+||+++.+.+.. +++.++++|+++|
T Consensus 2 ~~~~~~~~~~~~~~~~a~~lv~~~~~ia~~lgl~~~v~G~tlla~gtslPEl~~si~a~~-------~g~~~la~g~ilG 74 (307)
T TIGR00367 2 ILIGYLILGLILLIYGADLFVKSSVRIARKLGISPLIIGVTVVAIGTSLPELFTSLIASL-------IGQPDIGVGNVIG 74 (307)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcccHHHHHHHHHHh-------cCCCCeehhhhhh
Confidence 356667778887 9999999999999999999 57999999999999999999665554 4566799999999
Q ss_pred HHHHHHHHHHHHHhhhcccccccCccccccCCccccccccccceeecccchhhhHHHHHHHHHHHHHHhhhhhccccchh
Q 048038 165 STVMLSTVIWGTCVVVGKCDLRESDSVAIDGQNTKGFRLTGTGVSTDVWTCYAARIMAISVIPFVVVQLPQMLNSTSGRH 244 (591)
Q Consensus 165 S~i~~ltli~G~~~l~g~~~~~~~~~~~~~~~~~~~f~~~~~gv~~~~~~~~~a~im~ls~~~~li~~lp~~~~~~~~~~ 244 (591)
|+++|+++++|+|.++++.+.+.+ . ..++...++++.+.+.++ + .. +
T Consensus 75 S~l~n~l~i~g~~~l~~~~~~~~~-----------~-------------~~~d~~~~l~~~~~~~~~-~---~~---g-- 121 (307)
T TIGR00367 75 SNIFNILLILGLSAIFSPIIVDTD-----------W-------------LRRDFSFYLLVSILLLFF-G---LD---G-- 121 (307)
T ss_pred HHHHHHHHHHHHHHhhcceeechH-----------H-------------HHHHHHHHHHHHHHHHHH-H---Hh---C--
Confidence 999999999999999886544321 0 122444555554443321 1 11 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhccchhhhHHHHHHhhhhhhhhcccCCcccHHHHHHHhhhhcCCCC
Q 048038 245 LAVLIALILSVSMLISYCLYQVFQPWIQKRRLAFAKHKHVISGILKHLRQRALGRLLTDSGEPNIDVIKKLFDAIDENKD 324 (591)
Q Consensus 245 ~~~~is~ivsv~lli~Ysayq~lhpWiq~~~~~~~~~~~l~~~il~~lk~~~l~~l~~~~~~~~~~~Lr~lF~~iD~n~D 324 (591)
.++++.+++++..|.+|..+.-..++++ ++ +
T Consensus 122 ---~i~~~~gi~ll~~Yv~yl~~~~~~~~~~----~~------------------------------------------~ 152 (307)
T TIGR00367 122 ---PISRLDGVVLLFLYVVYLLFLVKVERQM----IN------------------------------------------D 152 (307)
T ss_pred ---cchHHHHHHHHHHHHHHHHHHHHHHHhc----cc------------------------------------------c
Confidence 4788999999999999976531100000 00 0
Q ss_pred CCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHHHHHHHhhhcCCCCCCCCCCCCccccc
Q 048038 325 ERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEKWLNEAMQARTGSADPGPHTMKFLDDF 404 (591)
Q Consensus 325 G~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~~~~~~k~~~~~~~~~~~~~~~~~~~~ 404 (591)
+ .
T Consensus 153 ~-----------------------------------------------------------~------------------- 154 (307)
T TIGR00367 153 T-----------------------------------------------------------Y------------------- 154 (307)
T ss_pred c-----------------------------------------------------------c-------------------
Confidence 0 0
Q ss_pred cchhhhhhhhcCCccccchhccccCCCcchHHHHHHHHHHHHHHHHhhHHHHHHhHHHHHHhcCCCchhhhhhhhhcccc
Q 048038 405 HLQTKREHALLGAEEESDEVAEGVENPKWVSFKAVLMLLIGTIIAAAFADPLVDAVDNFSAATSIPSFFISFIALPFATN 484 (591)
Q Consensus 405 ~~~~~~e~~~l~~e~~~~e~~~~~~~~~~~~~~~v~~Ll~g~~~~~~~A~~lV~si~~~a~~~gIs~~~Is~iilPlats 484 (591)
++ ++.+ + ..+++ +.++.+..+++|.+++...|+++|++++.+++.+|+|+.++|++++|+|||
T Consensus 155 -----~~-------~~~~-~--~~~~~--~~~~~~~~~~~~~~~i~~~s~~~v~~~~~i~~~lgi~~~~~g~tl~a~~ts 217 (307)
T TIGR00367 155 -----TE-------EQLD-E--NNRRK--QIFFLIVLLIIGLTGLVVGSRLLVDGAVQIAEIFGISEKIIGLTLLAIGTS 217 (307)
T ss_pred -----ch-------hhhh-c--ccccc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcc
Confidence 00 0000 0 00011 235778899999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHhccccccccccchhhhhhhHHHHHHHHHHHHHH-HhcCc---ccccchhHHHHHHHHHHHHHHHhcCC
Q 048038 485 SSEAVSAIIFASRKKIRTASLTFSELYGAVTMNNILCLSVFLALV-YARGL---TWDFSSEVLVILIVCLVMGAFASFRT 560 (591)
Q Consensus 485 ~~E~vsai~~A~k~k~~~as~t~s~i~g~v~m~n~l~l~vfl~lv-~~r~l---~w~fs~evlvil~v~~~~~~~~~~r~ 560 (591)
+||.++++.+++|++.+++ ++++.|+ |+.++.+.+++. ...++ .+.|..+...+++.++++.++..+++
T Consensus 218 ~PE~~~~i~a~~~g~~~~a---vg~~iGs----~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (307)
T TIGR00367 218 LPELVVSVAAARKGLGDIA---VGNVIGS----NIFNILVGLGVPSLFYPIPVEPLAYSLDAPVMVIVTLVLMLVFKTSM 290 (307)
T ss_pred cHHHHHHHHHHHcCCCchH---HHHHhhh----HHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999998888 3333333 444444333331 22232 33455576666655555555555678
Q ss_pred ccchHHHHHHHHHHHHH
Q 048038 561 NFPLWTCSIAYALYPFS 577 (591)
Q Consensus 561 ~~~~~~~~~~~~lY~~s 577 (591)
+.++|+|++++.+|.+|
T Consensus 291 ~i~~~~g~~l~~~Y~~y 307 (307)
T TIGR00367 291 KLGRWEGFLLLALYIAY 307 (307)
T ss_pred eehHHHHHHHHHHHHhC
Confidence 89999999999999754
No 8
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.96 E-value=1.8e-28 Score=255.38 Aligned_cols=134 Identities=23% Similarity=0.398 Sum_probs=115.4
Q ss_pred HHHHHHH--HHHHhHHHHHHHHHHHHhC--CCccchhHHhhhcchhHHHHHHHhhcccchhhhhccceeehhhhhhHHHH
Q 048038 93 IVYGYLM--YVAATYLSNGSELLLEILG--PGVVGGLFLPILGALPDAMLILVSGLSGTKETAQSQVSVGMGLLAGSTVM 168 (591)
Q Consensus 93 ~v~g~ll--~~~a~~l~~g~e~L~~~lg--p~iiG~~i~~~lgslPE~~i~l~s~l~~~~~~a~~~v~v~~G~l~GS~i~ 168 (591)
.+|-|.+ +.+.++++..-+.+-|++| -++.|+|++|.+||+||++.++ ..+.-.+.+||+|+++||.++
T Consensus 64 ~iYmFvALAIVCDefFVPSL~vItEkL~iSdDVAGATFMAAGgSAPElFTSv-------IGVFIt~~dVGiGTIVGSAvF 136 (588)
T KOG1307|consen 64 LIYMFVALAIVCDEFFVPSLDVITEKLGISDDVAGATFMAAGGSAPELFTSV-------IGVFITQGDVGIGTIVGSAVF 136 (588)
T ss_pred HHHHHHHHHHHhcccccccHHHHHHHhcCcccccchhhhhccCCchHHhhhh-------eeEEEecCCcceeeeeehhhh
Confidence 3566654 9999999999999999999 5799999999999999999944 445666778999999999999
Q ss_pred HHHHHHHHHhhhcccccccCccccccCCccccccccccceeecccchhhhHHHHHHHHHHHHHHhhhhhccccchhHHHH
Q 048038 169 LSTVIWGTCVVVGKCDLRESDSVAIDGQNTKGFRLTGTGVSTDVWTCYAARIMAISVIPFVVVQLPQMLNSTSGRHLAVL 248 (591)
Q Consensus 169 ~ltli~G~~~l~g~~~~~~~~~~~~~~~~~~~f~~~~~gv~~~~~~~~~a~im~ls~~~~li~~lp~~~~~~~~~~~~~~ 248 (591)
|++.+.|.|.++.+--.+-+ +|.+.+ +...+.++++.+++++.. -+
T Consensus 137 NIL~Vig~C~LFSrqvl~Lt-----------WWPLfR-----------D~sfY~lsl~~Li~Ff~D------------~~ 182 (588)
T KOG1307|consen 137 NILCVIGVCGLFSRQVLNLT-----------WWPLFR-----------DVSFYTLSLIMLIYFFLD------------EL 182 (588)
T ss_pred hHHHHHHHHHhhcccccccc-----------cchhhh-----------hhHHHHHHHHHHHHHHHh------------hH
Confidence 99999999999988777665 788876 778899998888865442 37
Q ss_pred HHHHHHHHHHHHHHHHHhH
Q 048038 249 IALILSVSMLISYCLYQVF 267 (591)
Q Consensus 249 is~ivsv~lli~Ysayq~l 267 (591)
++++.+++++..|.+|-++
T Consensus 183 I~WwEaL~L~~~Yi~Yv~~ 201 (588)
T KOG1307|consen 183 IMWWEALALLLMYISYVVF 201 (588)
T ss_pred HHHHHHHHHHHHHHHHhee
Confidence 9999999999999999877
No 9
>PRK10599 calcium/sodium:proton antiporter; Provisional
Probab=99.96 E-value=7.6e-27 Score=244.96 Aligned_cols=306 Identities=16% Similarity=0.264 Sum_probs=232.3
Q ss_pred HHHHhHHHHHHHHHHHHhCCCccchhHHhhhcchhHHHHHHHhhcc--cchhhhhccceeehhhhhhHHHHHHHHHHHHH
Q 048038 100 YVAATYLSNGSELLLEILGPGVVGGLFLPILGALPDAMLILVSGLS--GTKETAQSQVSVGMGLLAGSTVMLSTVIWGTC 177 (591)
Q Consensus 100 ~~~a~~l~~g~e~L~~~lgp~iiG~~i~~~lgslPE~~i~l~s~l~--~~~~~a~~~v~v~~G~l~GS~i~~ltli~G~~ 177 (591)
+.++--.++.+|.+|+|+| ..+|.+++++--...|.++|..-.++ +++.++++.+ ---...-++.+.|+|
T Consensus 51 ~~~~~~~v~hAe~lA~~~G-eP~GtliLtlsv~~iEv~li~~~Ml~g~~~~tlaRDtv-------fa~vMi~~nGilGl~ 122 (366)
T PRK10599 51 LSSAFSVVRHADVLAHRLG-EPYGSLILSLSVVILEVSLISALMATGDAAPTLMRDTL-------YSIIMIVTGGLVGFS 122 (366)
T ss_pred HHHHHHHHHHHHHHHHHHC-CChHHHHHHHHHHHHHHHHHHHHHcCCCCCchHHHHHH-------HHHHHHHhccHHHHH
Confidence 4467778899999999999 67899999999999997776555553 3455555533 222233477899999
Q ss_pred hhhcccccccCccccccCCccccccccccceeecccchhhhHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHH
Q 048038 178 VVVGKCDLRESDSVAIDGQNTKGFRLTGTGVSTDVWTCYAARIMAISVIPFVVVQLPQMLNSTSGRHLAVLIALILSVSM 257 (591)
Q Consensus 178 ~l~g~~~~~~~~~~~~~~~~~~~f~~~~~gv~~~~~~~~~a~im~ls~~~~li~~lp~~~~~~~~~~~~~~is~ivsv~l 257 (591)
+++|++++++| .||.+++. +|.+.+|.++++.++ +|+++. +..+....++.+++++
T Consensus 123 ll~GGlr~~eQ-----------~fn~~ga~-------~~~~~ll~La~l~Lv---lP~~~~---~~~~s~~~s~~~avv~ 178 (366)
T PRK10599 123 LLLGGRKFATQ-----------YMNLFGIK-------QYLIALFPLAIIVLV---FPMALP---GANFSTGQALLVALIS 178 (366)
T ss_pred HHHhccccCee-----------ecCHHhHH-------HHHHHHHHHHHHHHh---cCcccC---CCccchhHHHHHHHHH
Confidence 99999999998 88887652 479999999999999 999864 2333456788999999
Q ss_pred HHHHHHHHhHhHHHHHHHhhhhccchhhhHHHHHHhhhhhhhhcccCCcccHHHHHHHhhhhcCCCCCCcCHHHHHHHHH
Q 048038 258 LISYCLYQVFQPWIQKRRLAFAKHKHVISGILKHLRQRALGRLLTDSGEPNIDVIKKLFDAIDENKDERLSASELKALII 337 (591)
Q Consensus 258 li~Ysayq~lhpWiq~~~~~~~~~~~l~~~il~~lk~~~l~~l~~~~~~~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~ 337 (591)
++.|..|..+|.. +|+ +.|. |.+
T Consensus 179 lvlY~~fL~fQl~---------tHr-------------------------------~~F~--~~~--------------- 201 (366)
T PRK10599 179 AAMYGVFLLIQTK---------THQ-------------------------------SLFV--YEH--------------- 201 (366)
T ss_pred HHHHHHHHHHhcc---------chH-------------------------------HHhc--ccc---------------
Confidence 9999999876541 221 1111 000
Q ss_pred ccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHHHHHHHhhhcCCCCCCCCCCCCccccccchhhhhhhhcCC
Q 048038 338 GIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEKWLNEAMQARTGSADPGPHTMKFLDDFHLQTKREHALLGA 417 (591)
Q Consensus 338 ~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~ 417 (591)
++
T Consensus 202 ------------------------------------------------------------------------~~------ 203 (366)
T PRK10599 202 ------------------------------------------------------------------------ED------ 203 (366)
T ss_pred ------------------------------------------------------------------------cc------
Confidence 00
Q ss_pred ccccchhccccCCCcchHHHHHHHHHHHHHHHHhhHHHHHHhHHHHHHhcCCCchhhhhhhhhccccchhHHHHHHHHHh
Q 048038 418 EEESDEVAEGVENPKWVSFKAVLMLLIGTIIAAAFADPLVDAVDNFSAATSIPSFFISFIALPFATNSSEAVSAIIFASR 497 (591)
Q Consensus 418 e~~~~e~~~~~~~~~~~~~~~v~~Ll~g~~~~~~~A~~lV~si~~~a~~~gIs~~~Is~iilPlats~~E~vsai~~A~k 497 (591)
|++++|++++++.+.+.+ ++..+|+++++.++..||.++++++...+++|+|+.|+|+++ |+..|+||+++|+++|+|
T Consensus 204 ~~~~~~~~~~~~~~~~~~-~s~~~L~v~lv~Vv~lAe~lv~sIe~~v~~~Glp~afiGvII-aiv~~apE~~tAV~aA~k 281 (366)
T PRK10599 204 EGDDDDPHHGKPSAHSSL-WHAIWLIIHLIAVIAVTKMNASPLETLLTSMNAPVAFTGFLV-ALLILSPEGLGALKAVLN 281 (366)
T ss_pred ccccccccccccccchhH-HHHHHHHHHHHHHHHHHHHhHhhHHHHHHhcCCCHHHHHHHH-HHHHcchhHHHHHHHHHc
Confidence 000011111111122332 367889999999999999999999999999999999999886 999999999999999999
Q ss_pred ccccccccccchhhhhhhHHHHHHHH-------HHHHHHHhcCcccccchhHHHHHHHHHHHHHHHhcCCccchHHHHHH
Q 048038 498 KKIRTASLTFSELYGAVTMNNILCLS-------VFLALVYARGLTWDFSSEVLVILIVCLVMGAFASFRTNFPLWTCSIA 570 (591)
Q Consensus 498 ~k~~~as~t~s~i~g~v~m~n~l~l~-------vfl~lv~~r~l~w~fs~evlvil~v~~~~~~~~~~r~~~~~~~~~~~ 570 (591)
||+|++ .++++|+.+++. ++++|+..+|+++.|++.-.++++.++++..+....++-++.+|.+.
T Consensus 282 Nkmq~s--------lnialGSsLq~illtvP~lvlig~~~g~pm~L~f~~~e~vlL~ltv~v~~~t~~dGrsN~LeG~~h 353 (366)
T PRK10599 282 NQVQRA--------MNLFFGSVLATISLTVPVVTLIAFLTGNELQFGLGAPEMVVMVASLVLCHISFSTGRTNVLNGAAH 353 (366)
T ss_pred CchHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEecCCHHHHHHHHHHHHHHHhccCCCchHHHHHHHH
Confidence 999999 999999999876 45899999999999999444455666666666555666778999999
Q ss_pred HHHHHHHHHHHH
Q 048038 571 YALYPFSLALVY 582 (591)
Q Consensus 571 ~~lY~~sl~lv~ 582 (591)
+.+|..|+.+.+
T Consensus 354 L~lf~~y~~l~~ 365 (366)
T PRK10599 354 LALFAAYLMTIF 365 (366)
T ss_pred HHHHHHHHHHHh
Confidence 999999988765
No 10
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=99.95 E-value=2.4e-26 Score=257.72 Aligned_cols=145 Identities=20% Similarity=0.213 Sum_probs=108.5
Q ss_pred HHHHHHHHHHHHhhHHHHHHhHHHHHHhcCCCchhhhhhhhhccccchhHHHHHHHHHhccccccccccchhhhhhhHHH
Q 048038 439 VLMLLIGTIIAAAFADPLVDAVDNFSAATSIPSFFISFIALPFATNSSEAVSAIIFASRKKIRTASLTFSELYGAVTMNN 518 (591)
Q Consensus 439 v~~Ll~g~~~~~~~A~~lV~si~~~a~~~gIs~~~Is~iilPlats~~E~vsai~~A~k~k~~~as~t~s~i~g~v~m~n 518 (591)
.+.++.+++++++++..+|+.+..++..+|||+.|+|++++++|+|.||++++++.|+|+..+++ +++++|+.+.|-
T Consensus 935 ~ltFi~SIiwIsi~SyilV~~at~IG~vlGIse~VmGlTfLA~GTSIPDlisSvivArkG~gdMA---Van~iGSNIFnI 1011 (1096)
T TIGR00927 935 VITFLGSIMWIAMFSYLMVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMA---VSSSVGSNIFDI 1011 (1096)
T ss_pred eehHHHHHHHHHHHHHHHHHHHHHhhhhcCCChhhhhhhhhhhhcccHHHHHHHHHHHccCCcce---eeeccccchhee
Confidence 45678899999999999999999999999999999999999999999999999999999988777 666666666666
Q ss_pred HHHHHHHHHH-HHhcCc-ccccchh----HHHHHHHHHHH--HHHHhcCCccchHHHHHHHHHHHHHHHHHHHHHh
Q 048038 519 ILCLSVFLAL-VYARGL-TWDFSSE----VLVILIVCLVM--GAFASFRTNFPLWTCSIAYALYPFSLALVYVLDY 586 (591)
Q Consensus 519 ~l~l~vfl~l-v~~r~l-~w~fs~e----vlvil~v~~~~--~~~~~~r~~~~~~~~~~~~~lY~~sl~lv~~l~~ 586 (591)
++|+++...+ .+..+. .+.++.. ..++++..+++ ..+..++.+..++.|++++++|.+++++.+++++
T Consensus 1012 llgLGlPWlI~~li~g~~pV~V~S~GL~~sI~LLF~~LlflissI~l~kwrL~R~lGivlLvlYvvFLV~aiLiE~ 1087 (1096)
T TIGR00927 1012 TVGLPVPWLLFSLINGLQPVPVSSNGLFCAIVLLFLMLLFVISSIASCKWRMNKILGFTMFLLYFVFLIISVMLED 1087 (1096)
T ss_pred eeeccHHHHHHHHhccCcceeecCccHHHHHHHHHHHHHHHHHHHHhcceEEechHHHHHHHHHHHHHHHHHHHhc
Confidence 6666653222 122222 2234331 12222222222 2223477889999999999999999999888774
No 11
>PLN03151 cation/calcium exchanger; Provisional
Probab=99.76 E-value=7.7e-16 Score=173.63 Aligned_cols=153 Identities=14% Similarity=0.128 Sum_probs=107.6
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhHHHHHHhcCCCchhhhhhhhhccccchhHHHHHHHHHhccccccccccchhhhhhhH
Q 048038 437 KAVLMLLIGTIIAAAFADPLVDAVDNFSAATSIPSFFISFIALPFATNSSEAVSAIIFASRKKIRTASLTFSELYGAVTM 516 (591)
Q Consensus 437 ~~v~~Ll~g~~~~~~~A~~lV~si~~~a~~~gIs~~~Is~iilPlats~~E~vsai~~A~k~k~~~as~t~s~i~g~v~m 516 (591)
..+.-++.+++++.+.|.-+|+-++.+...+|||+.++|+++++.|+|.+++++-+..|+++..+++ +.++..+|+-..
T Consensus 484 ~~~~~f~~Si~wi~~~a~elv~~l~~iG~i~~is~~~lglTvlA~gnsi~Dlian~~lA~~G~~~m~-mA~~a~~ggp~F 562 (650)
T PLN03151 484 WVLGGFIMSIVWFYMIANELVALLVAFGVIFGINPSILGLTVLAWGNSMGDLMSNVALAMNGGDGVQ-IAMSGCYAGPMF 562 (650)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHccHHHHHHHHHHHHcCCchhH-HHHHHhhhhhHH
Confidence 4566678899999999999999999999999999999999999999999999999999999954322 337777777777
Q ss_pred HHHHHHHHHHHHHH--hcCccc--ccch--h-HHHHHHHHHHHHHHH--hcCCccchHHHHHHHHHHHHHHHHHHHHH-h
Q 048038 517 NNILCLSVFLALVY--ARGLTW--DFSS--E-VLVILIVCLVMGAFA--SFRTNFPLWTCSIAYALYPFSLALVYVLD-Y 586 (591)
Q Consensus 517 ~n~l~l~vfl~lv~--~r~l~w--~fs~--e-vlvil~v~~~~~~~~--~~r~~~~~~~~~~~~~lY~~sl~lv~~l~-~ 586 (591)
|-.+|+++-+-+-. .++-.. ..+. . ....++++++..++. ..+-+.++..|..++.+|.+++++...-+ .
T Consensus 563 ~il~glG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~L~~~li~~~~~~f~~~R~~G~~li~~Y~~Fl~~~~~~~~~ 642 (650)
T PLN03151 563 NTLVGLGMSMLLGAWSKSPESYMLPEDSSLFYTMGFLVSGLIWALVVLPRNDMRPNKTLGVGLIALYLIFLTFRVSTAMG 642 (650)
T ss_pred HHHHhccHHHHHHHhhcCCCceeecCCChHHHHHHHHHHHHHHHHHHHHHhCeeechhHHHHHHHHHHHHHHHHHHHHhC
Confidence 77777665433321 222221 2221 1 122223333333322 34666789999999999988887765433 2
Q ss_pred hcCC
Q 048038 587 FFGW 590 (591)
Q Consensus 587 ~~~~ 590 (591)
++.|
T Consensus 643 ~~~~ 646 (650)
T PLN03151 643 FIPW 646 (650)
T ss_pred cccc
Confidence 4555
No 12
>PRK10734 putative calcium/sodium:proton antiporter; Provisional
Probab=99.44 E-value=1.6e-12 Score=136.96 Aligned_cols=137 Identities=20% Similarity=0.253 Sum_probs=111.6
Q ss_pred HHHHHHHHHHHHHhhHHHHHHhHHHHHHhcCCCchhhhhhhhhccccchhHHHHHHHHHhccccccccccchhhhhhhHH
Q 048038 438 AVLMLLIGTIIAAAFADPLVDAVDNFSAATSIPSFFISFIALPFATNSSEAVSAIIFASRKKIRTASLTFSELYGAVTMN 517 (591)
Q Consensus 438 ~v~~Ll~g~~~~~~~A~~lV~si~~~a~~~gIs~~~Is~iilPlats~~E~vsai~~A~k~k~~~as~t~s~i~g~v~m~ 517 (591)
.+.++++|.+++...++++|++++.+++++|+|+.++|.+++++|||+||.++++.++++++.+++ .|++..+
T Consensus 4 ~~~~~~~gl~~l~~ga~~lv~~~~~ia~~lgis~~viG~tiva~gTSlPEl~vsv~A~~~g~~~ia-------~GnilGS 76 (325)
T PRK10734 4 ATALLIIGLLLLVYGADRLVFAASILCRTFGIPPLIIGMTVVGIGTSLPEIIVSVAASLHGQRDLA-------VGTALGS 76 (325)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcchhHHHHHHHHHHcCCCcch-------hhhhhhH
Confidence 456788999999999999999999999999999999999999999999999999999999999999 5555555
Q ss_pred HHHHHHHHHHH-HHhcCcccccch---hHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHH
Q 048038 518 NILCLSVFLAL-VYARGLTWDFSS---EVLVILIVCLVMGAFASFRTNFPLWTCSIAYALYPFSLALVY 582 (591)
Q Consensus 518 n~l~l~vfl~l-v~~r~l~w~fs~---evlvil~v~~~~~~~~~~r~~~~~~~~~~~~~lY~~sl~lv~ 582 (591)
|+.++.+++++ .+.+|+..+.+. +...++.+.+++..+ ..+.++.+|+|.+++++|..|++..+
T Consensus 77 ni~ni~lilg~~~l~~~~~~~~~~~~~~~~~ll~~~~~~~~~-~~~~~l~~~~g~~ll~~~~~yl~~~~ 144 (325)
T PRK10734 77 NITNILLILGLAALIRPFTVHSDVLRRELPLMLLVSVLAGSV-LYDGQLSRSDGIFLLLLAVLWLLFIV 144 (325)
T ss_pred HHHHHHHHHHHHHHhCCcccChHHHHHHHHHHHHHHHHHHHH-HHCCcCcHHHHHHHHHHHHHHHHHHH
Confidence 77777777775 466777665442 555555544444433 35677899999999999999987655
No 13
>PF01699 Na_Ca_ex: Sodium/calcium exchanger protein; InterPro: IPR004837 The sodium/calcium exchangers are a family of integral membrane proteins. This domain covers the integral membrane regions of these proteins. Sodium/calcium exchangers regulate intracellular Ca2+ concentrations in many cells; cardiac myocytes, epithelial cells, neurons retinal rod photoreceptors and smooth muscle cells []. Ca2+ is moved into or out of the cytosol depending on Na+ concentration []. In humans and rats there are 3 isoforms; NCX1 NCX2 and NCX3 []. ; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3V5U_A 3V5S_A.
Probab=99.32 E-value=4.5e-12 Score=116.68 Aligned_cols=128 Identities=20% Similarity=0.267 Sum_probs=93.1
Q ss_pred HHHHhhHHHHHHhHHHHHHhcCCCchhhhhhhhhccccchhHHHHHHHHHhccccccccccchhhhhhhHHHHHHHHHHH
Q 048038 447 IIAAAFADPLVDAVDNFSAATSIPSFFISFIALPFATNSSEAVSAIIFASRKKIRTASLTFSELYGAVTMNNILCLSVFL 526 (591)
Q Consensus 447 ~~~~~~A~~lV~si~~~a~~~gIs~~~Is~iilPlats~~E~vsai~~A~k~k~~~as~t~s~i~g~v~m~n~l~l~vfl 526 (591)
+++.+.|++++++++.+++..|+|+.++|.+++|+++|+||.++++..++|++.+++ +++++|+..+|.++..++.
T Consensus 1 i~i~~~a~~l~~~~~~i~~~~~i~~~~~g~~lla~~~slpe~~~~~~~~~~g~~~la---~~~~~Gs~~~~~~l~~gl~- 76 (140)
T PF01699_consen 1 ILIIVAAEFLVESVEIIAERLGISESFLGLTLLALATSLPELIVAISAARKGNPDLA---IGNIIGSNIFNITLIVGLI- 76 (140)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCTB-HCCHHHCCHHCCCCHHHHHHHHHHHCTT-CHHH---HHHHHHHHHHHHHTHHHHH-
T ss_pred CEehHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcCHHHHHHHHHHhhccccchh---hhcccchHHHHHHHHHHHH-
Confidence 357789999999999999999999999999999999999999999999999987777 4444444444444433222
Q ss_pred HHHHhcCcc--------cccchhHHHHHHHHHHHHHHHh---cCCccchHHHHHHHHHHHHHHHH
Q 048038 527 ALVYARGLT--------WDFSSEVLVILIVCLVMGAFAS---FRTNFPLWTCSIAYALYPFSLAL 580 (591)
Q Consensus 527 ~lv~~r~l~--------w~fs~evlvil~v~~~~~~~~~---~r~~~~~~~~~~~~~lY~~sl~l 580 (591)
.+.++.. +.+..+...+++.++++..+.. .+.+.++|+|++++.+|++++++
T Consensus 77 --~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~y~~y~~~ 139 (140)
T PF01699_consen 77 --LLFGPIKLGSQTIDWSSFTRDFSFLLLAILLLILFFLAFIRDGRISRFEGLVLLILYILYLVF 139 (140)
T ss_dssp --HHHS-B---------HHHHHHHHHHHHHHHHHHHCCT---HCT-BSHHHHHHHHHHHHHHHHH
T ss_pred --HHhccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHcCCeEhHHHHHHHHHHHHHHHhc
Confidence 1233332 2233366666666666666554 47889999999999999998865
No 14
>COG0530 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]
Probab=99.31 E-value=3.3e-11 Score=126.36 Aligned_cols=141 Identities=23% Similarity=0.291 Sum_probs=123.5
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHhHHHHHHhcCCCchhhhhhhhhccccchhHHHHHHHHHhccccccccccchhhhh
Q 048038 434 VSFKAVLMLLIGTIIAAAFADPLVDAVDNFSAATSIPSFFISFIALPFATNSSEAVSAIIFASRKKIRTASLTFSELYGA 513 (591)
Q Consensus 434 ~~~~~v~~Ll~g~~~~~~~A~~lV~si~~~a~~~gIs~~~Is~iilPlats~~E~vsai~~A~k~k~~~as~t~s~i~g~ 513 (591)
..+..+..+++|.+++...||.+|++++.++++.|+|++++|.+++++||++||..+++.++.+++.+++ +|+
T Consensus 7 ~~~~~~~~~i~~l~llv~~ad~lv~~a~~Is~~~gi~~~~iG~tiva~gTslPE~~vs~~a~l~g~~~ia-------vGn 79 (320)
T COG0530 7 MLLLLILLLIAGLILLVKGADLLVDAASAISRRFGISELIIGLTIVAFGTSLPELAVSLVAALSGNPDIA-------VGN 79 (320)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHccChHHHHHHHHHHcCCCCee-------eeh
Confidence 4456788899999999999999999999999999999999999999999999999999999999999999 788
Q ss_pred hhHHHHHHHHHHHHHH-HhcCcccccc---hhHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHH
Q 048038 514 VTMNNILCLSVFLALV-YARGLTWDFS---SEVLVILIVCLVMGAFASFRTNFPLWTCSIAYALYPFSLALVY 582 (591)
Q Consensus 514 v~m~n~l~l~vfl~lv-~~r~l~w~fs---~evlvil~v~~~~~~~~~~r~~~~~~~~~~~~~lY~~sl~lv~ 582 (591)
+..+|+.++++++++. +.++.+++-. .|...+++++.++..+. ...+.+++.|+..+++|..|+...+
T Consensus 80 vlGSni~ni~li~gl~ali~~~~~~~~~~~r~~~f~ll~~~~~~~~~-~~~~~~~~~gi~ll~l~~~yl~~~~ 151 (320)
T COG0530 80 VLGSNIFNILLILGLAALIAPLKVDSDVLRREIPFLLLATLILLLVL-LDGHLSRLDGIVLLLLYVLYLYYLL 151 (320)
T ss_pred hhhHHHHHHHHHHHHHHHHhhhHhhhhHHHHhhHHHHHHHHHHHHHH-HcCCccHHHHHHHHHHHHHHHHHHH
Confidence 8888999999998884 6777777764 38888888888777554 5777999999999999988776655
No 15
>TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein. This alignment models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat.
Probab=99.26 E-value=8.5e-11 Score=123.14 Aligned_cols=136 Identities=16% Similarity=0.206 Sum_probs=106.9
Q ss_pred HHHHHHHHHHHHhhHHHHHHhHHHHHHhcCCCchhhhhhhhhccccchhHHHHHHHHHhccccccccccchhhhhhhHH-
Q 048038 439 VLMLLIGTIIAAAFADPLVDAVDNFSAATSIPSFFISFIALPFATNSSEAVSAIIFASRKKIRTASLTFSELYGAVTMN- 517 (591)
Q Consensus 439 v~~Ll~g~~~~~~~A~~lV~si~~~a~~~gIs~~~Is~iilPlats~~E~vsai~~A~k~k~~~as~t~s~i~g~v~m~- 517 (591)
+..+++|.+++...+|.++++++.+++.+|+|+.++|.+++|+|||+||.++++.++++++.+++ .+.++|
T Consensus 4 ~~~~~~~~~~~~~~a~~lv~~~~~ia~~lgl~~~v~G~tlla~gtslPEl~~si~a~~~g~~~la--------~g~ilGS 75 (307)
T TIGR00367 4 IGYLILGLILLIYGADLFVKSSVRIARKLGISPLIIGVTVVAIGTSLPELFTSLIASLIGQPDIG--------VGNVIGS 75 (307)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcccHHHHHHHHHHhcCCCCee--------hhhhhhH
Confidence 45677899999999999999999999999999999999999999999999999999999998888 333333
Q ss_pred HHHHHHHHHHHH-HhcCcccc---cchhHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHH
Q 048038 518 NILCLSVFLALV-YARGLTWD---FSSEVLVILIVCLVMGAFASFRTNFPLWTCSIAYALYPFSLALVYV 583 (591)
Q Consensus 518 n~l~l~vfl~lv-~~r~l~w~---fs~evlvil~v~~~~~~~~~~r~~~~~~~~~~~~~lY~~sl~lv~~ 583 (591)
|+.++.+.+++. +.+++.-+ +..|...+++.+.++..+. .++++.+++|.+++++|.+|+...+-
T Consensus 76 ~l~n~l~i~g~~~l~~~~~~~~~~~~~d~~~~l~~~~~~~~~~-~~g~i~~~~gi~ll~~Yv~yl~~~~~ 144 (307)
T TIGR00367 76 NIFNILLILGLSAIFSPIIVDTDWLRRDFSFYLLVSILLLFFG-LDGPISRLDGVVLLFLYVVYLLFLVK 144 (307)
T ss_pred HHHHHHHHHHHHHhhcceeechHHHHHHHHHHHHHHHHHHHHH-HhCcchHHHHHHHHHHHHHHHHHHHH
Confidence 444555555553 34555333 4457666666666655544 45679999999999999999877763
No 16
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=99.22 E-value=9.5e-11 Score=133.33 Aligned_cols=131 Identities=11% Similarity=0.153 Sum_probs=102.5
Q ss_pred HHHHHhhHHHHHHhHHHHHHhcCCCchhhhhhhhhccccchhHHHHHHHHHhccccccccccchhhhhhhHHHHHHHHHH
Q 048038 446 TIIAAAFADPLVDAVDNFSAATSIPSFFISFIALPFATNSSEAVSAIIFASRKKIRTASLTFSELYGAVTMNNILCLSVF 525 (591)
Q Consensus 446 ~~~~~~~A~~lV~si~~~a~~~gIs~~~Is~iilPlats~~E~vsai~~A~k~k~~~as~t~s~i~g~v~m~n~l~l~vf 525 (591)
.++..+++++||.+++.+++.+|+|+.++|.+++++|+|+||++++++.+.+++.+++ +|++..+|++++.++
T Consensus 469 v~LaIv~dDyFVPSLe~IAekLgLSE~VAGaTLLAfGTSAPELfTSLiAv~~g~sDIG-------VGNIVGSnIFNILLV 541 (1096)
T TIGR00927 469 VALAIVCDEYFVPALGVITDKLQISEDVAGATFMAAGGSAPELFTSLIGVFISHSNVG-------IGTIVGSAVFNILFV 541 (1096)
T ss_pred HHHHHHHHHHhHHHHHHHHHHhCCcHhhhheeeeeeecCcHHHHHHHHHHHcCCCcce-------ehhhHhHHHHHHHHH
Confidence 4555667799999999999999999999999999999999999999999999998888 455444566777777
Q ss_pred HHHH-HhcC----ccc-ccchhHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHH
Q 048038 526 LALV-YARG----LTW-DFSSEVLVILIVCLVMGAFASFRTNFPLWTCSIAYALYPFSLALVYVL 584 (591)
Q Consensus 526 l~lv-~~r~----l~w-~fs~evlvil~v~~~~~~~~~~r~~~~~~~~~~~~~lY~~sl~lv~~l 584 (591)
+|++ ++.+ +.| .+-.+.+..++.+.++.++ ...+.+.+|+|++++++|++|++++++=
T Consensus 542 LGl~aLis~~~l~Ld~~~L~RDllFyILAv~lLilf-~lDG~Itr~EgIILLlLYiiYVvvm~~n 605 (1096)
T TIGR00927 542 IGTCALFSREILNLTWWPLFRDVSFYILDLMMLILF-FLDSLIAWWESLLLLLAYALYVFTMKWN 605 (1096)
T ss_pred HhhheeeccccccccccceehhHHHHHHHHHHHHHH-HhCCeEcHHHHHHHHHHHHHHHHHHHHh
Confidence 7774 2333 333 3444776666655554333 3467899999999999999999888753
No 17
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=99.12 E-value=6.5e-11 Score=95.02 Aligned_cols=66 Identities=26% Similarity=0.490 Sum_probs=58.7
Q ss_pred HHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHH
Q 048038 311 VIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGI 376 (591)
Q Consensus 311 ~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~ 376 (591)
+++++|+.+|+|+||.|+.+|++.+++..+........++.++++++.+|.|+||.|+|+||...+
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 589999999999999999999999999998654444667888899999999999999999998764
No 18
>PF01699 Na_Ca_ex: Sodium/calcium exchanger protein; InterPro: IPR004837 The sodium/calcium exchangers are a family of integral membrane proteins. This domain covers the integral membrane regions of these proteins. Sodium/calcium exchangers regulate intracellular Ca2+ concentrations in many cells; cardiac myocytes, epithelial cells, neurons retinal rod photoreceptors and smooth muscle cells []. Ca2+ is moved into or out of the cytosol depending on Na+ concentration []. In humans and rats there are 3 isoforms; NCX1 NCX2 and NCX3 []. ; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3V5U_A 3V5S_A.
Probab=99.08 E-value=1.3e-10 Score=106.87 Aligned_cols=83 Identities=25% Similarity=0.464 Sum_probs=69.2
Q ss_pred HHHHHHhHHHHHHHHHHHHhC--CCccchhHHhhhcchhHHHHHHHhhcccchhhhhccceeehhhhhhHHHHHHHHHHH
Q 048038 98 LMYVAATYLSNGSELLLEILG--PGVVGGLFLPILGALPDAMLILVSGLSGTKETAQSQVSVGMGLLAGSTVMLSTVIWG 175 (591)
Q Consensus 98 ll~~~a~~l~~g~e~L~~~lg--p~iiG~~i~~~lgslPE~~i~l~s~l~~~~~~a~~~v~v~~G~l~GS~i~~ltli~G 175 (591)
+...+|++++++.|.+++++| +.+.|++++|+.+++||.+..+.+. .+++.++++|+++||+++|+++++|
T Consensus 2 ~i~~~a~~l~~~~~~i~~~~~i~~~~~g~~lla~~~slpe~~~~~~~~-------~~g~~~la~~~~~Gs~~~~~~l~~g 74 (140)
T PF01699_consen 2 LIIVAAEFLVESVEIIAERLGISESFLGLTLLALATSLPELIVAISAA-------RKGNPDLAIGNIIGSNIFNITLIVG 74 (140)
T ss_dssp HHHHHHHHHHHHHHHHHCCCTB-HCCHHHCCHHCCCCHHHHHHHHHHH-------CTT-CHHHHHHHHHHHHHHHHTHHH
T ss_pred EehHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcCHHHHHHHHHHh-------hccccchhhhcccchHHHHHHHHHH
Confidence 347899999999999999888 5799999999999999999955544 4557779999999999999999999
Q ss_pred HHhhhccccccc
Q 048038 176 TCVVVGKCDLRE 187 (591)
Q Consensus 176 ~~~l~g~~~~~~ 187 (591)
++.++++.+.++
T Consensus 75 l~~l~~~~~~~~ 86 (140)
T PF01699_consen 75 LILLFGPIKLGS 86 (140)
T ss_dssp HHHHHS-B----
T ss_pred HHHHhccccccc
Confidence 999999887643
No 19
>KOG2399 consensus K+-dependent Na+:Ca2+ antiporter [Inorganic ion transport and metabolism]
Probab=99.07 E-value=9.7e-09 Score=114.87 Aligned_cols=151 Identities=14% Similarity=0.146 Sum_probs=111.9
Q ss_pred cchHHHHHHHHHHHHHHHHhhHHHHHHhHHHHHHhcCCCchhhhhhhhhccccchhHHHHHHHHHhccccccccccchhh
Q 048038 432 KWVSFKAVLMLLIGTIIAAAFADPLVDAVDNFSAATSIPSFFISFIALPFATNSSEAVSAIIFASRKKIRTASLTFSELY 511 (591)
Q Consensus 432 ~~~~~~~v~~Ll~g~~~~~~~A~~lV~si~~~a~~~gIs~~~Is~iilPlats~~E~vsai~~A~k~k~~~as~t~s~i~ 511 (591)
.+.......-++.+++++...|.=+|.-++.+..-+|+|+.+.|+|+.+-+.|..++++=+..|+++.-++| ++.-+
T Consensus 442 ~~~~v~~~~gF~mSi~wI~~~A~Eiv~vl~~lG~I~~ls~siLGLTv~AWgNSiGDLIAniavak~G~p~MA---maac~ 518 (605)
T KOG2399|consen 442 FYHWVFSALGFLMSIAWIYLIANELVAVLTMLGVIFGLSPSILGLTVLAWGNSIGDLIANIAVAKQGYPRMA---MAACI 518 (605)
T ss_pred hHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHhccHHHHHHHHHHHHcCcHHHH---HHHHh
Confidence 333344556678899999999999999999999999999999999999999999999999999999998888 77777
Q ss_pred hhhhHHHHHHHHHHHHH--HHhcCcccccc-----hhHHHHHHHHHHHHHHH--hcCCccchHHHHHHHHHHHHHHHHHH
Q 048038 512 GAVTMNNILCLSVFLAL--VYARGLTWDFS-----SEVLVILIVCLVMGAFA--SFRTNFPLWTCSIAYALYPFSLALVY 582 (591)
Q Consensus 512 g~v~m~n~l~l~vfl~l--v~~r~l~w~fs-----~evlvil~v~~~~~~~~--~~r~~~~~~~~~~~~~lY~~sl~lv~ 582 (591)
||...|-.+++++-+.. .-..+....-. ..+.+.+.++++...+. ..|-+.+|..|+.+..+|..+.+...
T Consensus 519 GGplfn~lvg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~fL~i~l~~slv~~~~~~f~~~r~~gi~L~~lyi~f~~~~~ 598 (605)
T KOG2399|consen 519 GGPLFNLLVGLGLPLVISSLQGKPGNIVIPEDNSLRITLIFLLIGLLTSLVLIPTNRFRLRRVLGIGLLSLYIAFTLIFI 598 (605)
T ss_pred hhHHHHHHHHhhHHHHHHHHhcCCCceecccCCceehhHHHHHHHHHHHHHHHhcccceeccchhhHHHHHHHHHHHHHH
Confidence 77777766666543322 22333332211 25555556665555444 35666778899999999988855544
Q ss_pred HHH
Q 048038 583 VLD 585 (591)
Q Consensus 583 ~l~ 585 (591)
+++
T Consensus 599 ll~ 601 (605)
T KOG2399|consen 599 LLE 601 (605)
T ss_pred HHH
Confidence 443
No 20
>TIGR00845 caca sodium/calcium exchanger 1. This model is specific for the eukaryotic sodium ion/calcium ion exchangers of the Caca family
Probab=98.95 E-value=7.7e-09 Score=119.68 Aligned_cols=140 Identities=12% Similarity=0.219 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhHHHHHHhcCCCchhhhhhhhhccccchhHHHHHHHHHhcc-ccccccccchhhhhhh
Q 048038 437 KAVLMLLIGTIIAAAFADPLVDAVDNFSAATSIPSFFISFIALPFATNSSEAVSAIIFASRKK-IRTASLTFSELYGAVT 515 (591)
Q Consensus 437 ~~v~~Ll~g~~~~~~~A~~lV~si~~~a~~~gIs~~~Is~iilPlats~~E~vsai~~A~k~k-~~~as~t~s~i~g~v~ 515 (591)
.....++++++++.+.+..+++.+..++..+|+|+.+||++++++|||+||+++++++|+|++ .+++ +|+++
T Consensus 754 ~g~~~f~~sI~~Ig~l~~~i~~~a~~ig~~~gi~~~viGlt~vA~GTSlPEl~~S~~aA~~~~~~d~a-------igNv~ 826 (928)
T TIGR00845 754 GGWACFVVSILMIGVLTAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADAS-------IGNVT 826 (928)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHhhhheeeeEecCcHHHHHHHHHHHcCCCCcee-------EEeec
Confidence 345677788999999999999999999999999999999999999999999999999999977 7888 55555
Q ss_pred HHHHHHHHHHHHHH-Hhc-------Ccccccch-----hHHHHHHHHHHH-HHHHhcCC-----------ccchHHHHHH
Q 048038 516 MNNILCLSVFLALV-YAR-------GLTWDFSS-----EVLVILIVCLVM-GAFASFRT-----------NFPLWTCSIA 570 (591)
Q Consensus 516 m~n~l~l~vfl~lv-~~r-------~l~w~fs~-----evlvil~v~~~~-~~~~~~r~-----------~~~~~~~~~~ 570 (591)
.+|++++.+.+|+. ..+ +..+..++ ++.++++.+++. ..+..+|. ...+.++...
T Consensus 827 GSNifNi~l~lGv~~~i~~~~~~~~~~~~~V~~~~l~~~v~l~~~~a~l~~~vl~~rr~~~~g~elggp~~~~~~~~~~~ 906 (928)
T TIGR00845 827 GSNAVNVFLGIGVAWSIAAIYHAANGTQFKVSPGTLAFSVTLFTIFAFICIGVLLYRRRPEIGGELGGPRTAKLLTSALF 906 (928)
T ss_pred chHHHHHHHHHHHHHHHhhhhhcccCceEEECccchhHHHHHHHHHHHHHHHHHHHhhcccccceeCCCCCcchhhhHHH
Confidence 55666655554441 222 22333332 555555444332 23334442 1224457777
Q ss_pred HHHHHHHHHHHHH
Q 048038 571 YALYPFSLALVYV 583 (591)
Q Consensus 571 ~~lY~~sl~lv~~ 583 (591)
+.++.+|+++..+
T Consensus 907 ~~lw~~y~~~s~l 919 (928)
T TIGR00845 907 VLLWLLYILFSSL 919 (928)
T ss_pred HHHHHHHHHHHHH
Confidence 7778777777763
No 21
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=98.94 E-value=1.7e-09 Score=92.65 Aligned_cols=73 Identities=21% Similarity=0.346 Sum_probs=62.8
Q ss_pred ccHHHHHHHhhhhcC-CCCCCcCHHHHHHHHHc-cccccccccch-HHHHHHHhhcCCCCCCCCChhHHHHHHHHHHHHH
Q 048038 307 PNIDVIKKLFDAIDE-NKDERLSASELKALIIG-IRFEEIDLDQD-DAVSKVLSDFDTSNDSHIDIKEFINGIEKWLNEA 383 (591)
Q Consensus 307 ~~~~~Lr~lF~~iD~-n~DG~Is~~ELk~~l~~-~~~~~~~~~~~-~ev~~lm~~~D~d~dG~Id~~EFl~a~~~~~~~~ 383 (591)
..+..+++.|+.+|+ |++|+|+.+|||..++. ++.. .++ ++++++|++.|.|+||.|+|+||+.-+.+--...
T Consensus 5 ~ai~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~----ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l~~~~ 80 (89)
T cd05022 5 KAIETLVSNFHKASVKGGKESLTASEFQELLTQQLPHL----LKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGELAKAV 80 (89)
T ss_pred HHHHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhh----ccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHH
Confidence 346789999999999 99999999999999988 6633 345 8999999999999999999999998887764433
No 22
>TIGR00846 caca2 calcium/proton exchanger. This model is generated from the calcium ion/proton exchangers of the CacA family.
Probab=98.94 E-value=5e-09 Score=112.23 Aligned_cols=87 Identities=18% Similarity=0.297 Sum_probs=75.3
Q ss_pred HHHHHHHHHH-HHHHhHHHHHHHHHHHHhC--CCccchhHHhhhcchhHHHHHHHhhcccchhhhhccceeehhhhhhHH
Q 048038 90 FLIIVYGYLM-YVAATYLSNGSELLLEILG--PGVVGGLFLPILGALPDAMLILVSGLSGTKETAQSQVSVGMGLLAGST 166 (591)
Q Consensus 90 fli~v~g~ll-~~~a~~l~~g~e~L~~~lg--p~iiG~~i~~~lgslPE~~i~l~s~l~~~~~~a~~~v~v~~G~l~GS~ 166 (591)
++.++.|.++ ..++++++++.+.+++.+| +.++|.++.|+.||+||.+..+ .+..+++.++++|+++|||
T Consensus 223 i~~l~~~~~~l~~~a~~lv~~~~~ia~~~gis~~~iGl~lvai~tslpE~~~si-------~aa~~g~~~lavg~~iGSn 295 (365)
T TIGR00846 223 AAWLVGATIVVALLAEYLVDTIESAVESWGLSVAFIGVILAPIVGNAAEHAGAV-------IAAFKNKLDIALGVALGSA 295 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhcccHHHHHHH-------HHHHcCCcchHHHHHHHHH
Confidence 3344556655 9999999999999999999 4699999999999999999944 4555678889999999999
Q ss_pred HHHHHHHHHHHhhhccc
Q 048038 167 VMLSTVIWGTCVVVGKC 183 (591)
Q Consensus 167 i~~ltli~G~~~l~g~~ 183 (591)
++|++++.|.+.+++..
T Consensus 296 i~n~l~vl~~~~li~~~ 312 (365)
T TIGR00846 296 LQIALFVVPVVVLVAWM 312 (365)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999999854
No 23
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.92 E-value=2e-09 Score=92.94 Aligned_cols=73 Identities=23% Similarity=0.372 Sum_probs=60.0
Q ss_pred cHHHHHHHhhhhc-CCCCC-CcCHHHHHHHHHcc-ccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHHHH
Q 048038 308 NIDVIKKLFDAID-ENKDE-RLSASELKALIIGI-RFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEKWL 380 (591)
Q Consensus 308 ~~~~Lr~lF~~iD-~n~DG-~Is~~ELk~~l~~~-~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~~~ 380 (591)
.+..+++.|+++| +|+|| +|+.+||++++... +........+++++++|+++|.|+||.|+|+||+.-+.+..
T Consensus 8 a~~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l~ 83 (93)
T cd05026 8 AMDTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAALT 83 (93)
T ss_pred HHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH
Confidence 4678899999999 79999 59999999999763 21111224778999999999999999999999999876654
No 24
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.84 E-value=6.6e-09 Score=88.83 Aligned_cols=68 Identities=25% Similarity=0.412 Sum_probs=59.4
Q ss_pred cHHHHHHHhhhhc-CCCCC-CcCHHHHHHHHHc-----cccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHHH
Q 048038 308 NIDVIKKLFDAID-ENKDE-RLSASELKALIIG-----IRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEKW 379 (591)
Q Consensus 308 ~~~~Lr~lF~~iD-~n~DG-~Is~~ELk~~l~~-----~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~~ 379 (591)
.+..+++.|+.+| +|+|| .|+.+||+.+++. .+.. ..+++++++++..|.|+||.|+|+||+.-+..-
T Consensus 6 ~~~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~----~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~~ 80 (88)
T cd05027 6 AMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEI----KEQEVVDKVMETLDSDGDGECDFQEFMAFVAMV 80 (88)
T ss_pred HHHHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCC----CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 4678999999998 89999 5999999999987 6643 678899999999999999999999998766543
No 25
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=98.81 E-value=8.4e-09 Score=97.06 Aligned_cols=69 Identities=25% Similarity=0.443 Sum_probs=64.2
Q ss_pred cccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHH
Q 048038 306 EPNIDVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEK 378 (591)
Q Consensus 306 ~~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~ 378 (591)
.+..+++++.|+.+|+|+||+|+..||+..++.+|.+ ..++|++++++.+|.|+||+|+|+||.+.+.+
T Consensus 88 ~~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge~----~~deev~~ll~~~d~d~dG~i~~~eF~~~~~~ 156 (160)
T COG5126 88 GDKEEELREAFKLFDKDHDGYISIGELRRVLKSLGER----LSDEEVEKLLKEYDEDGDGEIDYEEFKKLIKD 156 (160)
T ss_pred CCcHHHHHHHHHHhCCCCCceecHHHHHHHHHhhccc----CCHHHHHHHHHhcCCCCCceEeHHHHHHHHhc
Confidence 4568899999999999999999999999999988876 78999999999999999999999999998764
No 26
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.79 E-value=1.9e-08 Score=85.59 Aligned_cols=78 Identities=27% Similarity=0.392 Sum_probs=64.7
Q ss_pred cccHHHHHHHhhhhcC--CCCCCcCHHHHHHHHHc-cccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHHHHHH
Q 048038 306 EPNIDVIKKLFDAIDE--NKDERLSASELKALIIG-IRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEKWLNE 382 (591)
Q Consensus 306 ~~~~~~Lr~lF~~iD~--n~DG~Is~~ELk~~l~~-~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~~~~~ 382 (591)
+++++.+++.|+.+|+ |+||.|+.+|++.+++. ++........+++++++++.+|.|++|.|+|+||+..+.+.-+.
T Consensus 4 ~~~~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~~~~ 83 (88)
T cd00213 4 EKAIETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGKLAVA 83 (88)
T ss_pred HHHHHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHHH
Confidence 3567889999999999 89999999999999875 44321122568999999999999999999999999998877554
Q ss_pred H
Q 048038 383 A 383 (591)
Q Consensus 383 ~ 383 (591)
.
T Consensus 84 ~ 84 (88)
T cd00213 84 C 84 (88)
T ss_pred H
Confidence 3
No 27
>PLN03151 cation/calcium exchanger; Provisional
Probab=98.77 E-value=8e-08 Score=109.20 Aligned_cols=129 Identities=12% Similarity=0.163 Sum_probs=95.9
Q ss_pred HHHHHhhHHHHHHhHHHHHHhcCCCchhhhhhhhhccccchhHHHHHHHHHh-ccccccccccchhhhhhhHHHHHHHHH
Q 048038 446 TIIAAAFADPLVDAVDNFSAATSIPSFFISFIALPFATNSSEAVSAIIFASR-KKIRTASLTFSELYGAVTMNNILCLSV 524 (591)
Q Consensus 446 ~~~~~~~A~~lV~si~~~a~~~gIs~~~Is~iilPlats~~E~vsai~~A~k-~k~~~as~t~s~i~g~v~m~n~l~l~v 524 (591)
.++....+++++.+++.+++.+++||.++|.|++++|+++||..+++.++.+ ++.+++ + |++..+++..+++
T Consensus 152 ~~L~~ta~dyF~p~l~~Is~~L~lse~vAGvTlLAfGNsaPDlf~si~a~~~~~~~~l~---i----g~ilGs~lf~~~v 224 (650)
T PLN03151 152 YLLGNTAADYFCCSLEKLSKLLRLPPTVAGVTLLPLGNGAPDVFASIAAFVGKDAGEVG---L----NSVLGGAVFVTCV 224 (650)
T ss_pred HHHHHHHHHHhhHHHHHHHHHhCCCHHHHHHHHHHHhCCcHHHHHHHHHHHcCCCCcee---e----ehhhhHHHHHHHH
Confidence 4445567999999999999999999999999999999999999999977664 455665 2 3333335555556
Q ss_pred HHHHH-Hh---cCccc---ccchhHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHH
Q 048038 525 FLALV-YA---RGLTW---DFSSEVLVILIVCLVMGAFASFRTNFPLWTCSIAYALYPFSLALVY 582 (591)
Q Consensus 525 fl~lv-~~---r~l~w---~fs~evlvil~v~~~~~~~~~~r~~~~~~~~~~~~~lY~~sl~lv~ 582 (591)
.+|.+ +. +|+.. .|-.|+...++.+.++..+ ..++++.+|+|++++.+|.+|++.+.
T Consensus 225 V~G~v~l~~~~~pf~v~~~~f~RD~~F~lla~~~l~~~-l~~g~v~~~eai~ll~lY~~Yv~vv~ 288 (650)
T PLN03151 225 VVGIVSLCVADKEVQIDKRCFIRDLCFFLFTLVSLLVI-LMVGKVTVGGAIAFVSIYVVYAFLVA 288 (650)
T ss_pred HHHHHHHhccCCceeecchhHHHhHHHHHHHHHHHHHH-HHcCeEhHHHHHHHHHHHHHHHHHHH
Confidence 66665 32 24432 3334877777666555433 45788999999999999999998775
No 28
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.76 E-value=1.8e-08 Score=87.31 Aligned_cols=69 Identities=17% Similarity=0.320 Sum_probs=61.6
Q ss_pred CcccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHHH
Q 048038 305 GEPNIDVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEKW 379 (591)
Q Consensus 305 ~~~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~~ 379 (591)
++++...+++.|+.+|+|+||.|+.+|++.+++..+ ..+++++++++.+|.+++|.|+|+||+..+..-
T Consensus 5 s~~~~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~------~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~ 73 (96)
T smart00027 5 SPEDKAKYEQIFRSLDKNQDGTVTGAQAKPILLKSG------LPQTLLAKIWNLADIDNDGELDKDEFALAMHLI 73 (96)
T ss_pred CHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHcC------CCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 556788999999999999999999999999998865 357899999999999999999999999876543
No 29
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.72 E-value=2.3e-08 Score=85.98 Aligned_cols=73 Identities=25% Similarity=0.400 Sum_probs=60.2
Q ss_pred cHHHHHHHhhhhc-CCCCC-CcCHHHHHHHHHc-cccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHHHH
Q 048038 308 NIDVIKKLFDAID-ENKDE-RLSASELKALIIG-IRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEKWL 380 (591)
Q Consensus 308 ~~~~Lr~lF~~iD-~n~DG-~Is~~ELk~~l~~-~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~~~ 380 (591)
.++.+++.|+.+| +|+|| .|+.+|++.+++. ++......+.+++++++|+.+|.|++|.|+|+||+..+.+..
T Consensus 7 ~~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~~ 82 (92)
T cd05025 7 AMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAALT 82 (92)
T ss_pred HHHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHH
Confidence 3678999999997 99999 5999999999975 543211125788999999999999999999999998766543
No 30
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.70 E-value=3.8e-08 Score=78.62 Aligned_cols=60 Identities=18% Similarity=0.348 Sum_probs=54.4
Q ss_pred HHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHH
Q 048038 313 KKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEK 378 (591)
Q Consensus 313 r~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~ 378 (591)
++.|+.+|+|+||.|+.+|++.++...+. .+++++++++.+|.|++|.|+|.||+..+..
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g~------~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~ 61 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKSGL------PRSVLAQIWDLADTDKDGKLDKEEFAIAMHL 61 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHcCC------CHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 67899999999999999999999988753 5788999999999999999999999987754
No 31
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.69 E-value=3.6e-08 Score=84.30 Aligned_cols=68 Identities=25% Similarity=0.437 Sum_probs=57.7
Q ss_pred ccHHHHHHHhhhhcC-CC-CCCcCHHHHHHHHHc---cccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHH
Q 048038 307 PNIDVIKKLFDAIDE-NK-DERLSASELKALIIG---IRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEK 378 (591)
Q Consensus 307 ~~~~~Lr~lF~~iD~-n~-DG~Is~~ELk~~l~~---~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~ 378 (591)
+.+..+-.+|+++|. |+ +|+|+.+||++.++. +|.+ .++++++++|+++|.|+||.|+|+||+.-+.+
T Consensus 7 ~~~~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k----~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~ 79 (88)
T cd05029 7 QAIGLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSK----LQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGA 79 (88)
T ss_pred HHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCC----CCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence 346778899999998 78 999999999999964 3433 67899999999999999999999999855443
No 32
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.69 E-value=4.2e-08 Score=84.75 Aligned_cols=70 Identities=21% Similarity=0.331 Sum_probs=57.3
Q ss_pred HHHHHHHhhhhcC-CC-CCCcCHHHHHHHHHc-cccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHH
Q 048038 309 IDVIKKLFDAIDE-NK-DERLSASELKALIIG-IRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEK 378 (591)
Q Consensus 309 ~~~Lr~lF~~iD~-n~-DG~Is~~ELk~~l~~-~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~ 378 (591)
...+++.|+.+|. |+ ||+|+.+|++.++.. .+........+++++++++.+|.|+||.|+|+||+..+.+
T Consensus 7 ~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~ 79 (94)
T cd05031 7 MESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAG 79 (94)
T ss_pred HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 5679999999997 97 699999999999875 2210001257889999999999999999999999987654
No 33
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=98.65 E-value=5.6e-08 Score=91.30 Aligned_cols=66 Identities=23% Similarity=0.451 Sum_probs=61.6
Q ss_pred cHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHH
Q 048038 308 NIDVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIE 377 (591)
Q Consensus 308 ~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~ 377 (591)
..+.+++.|+.+|+|+||+||.+||+..+..+|.+ ..+++++++++..|.|+||.|+|.||++-+.
T Consensus 83 ~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~----~~~~e~~~mi~~~d~d~dg~i~f~ef~~~m~ 148 (151)
T KOG0027|consen 83 SSEELKEAFRVFDKDGDGFISASELKKVLTSLGEK----LTDEECKEMIREVDVDGDGKVNFEEFVKMMS 148 (151)
T ss_pred cHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCCc----CCHHHHHHHHHhcCCCCCCeEeHHHHHHHHh
Confidence 57799999999999999999999999999999976 5699999999999999999999999998764
No 34
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.64 E-value=7.1e-08 Score=82.67 Aligned_cols=73 Identities=18% Similarity=0.335 Sum_probs=59.1
Q ss_pred ccHHHHHHHhhh-hcCCCCC-CcCHHHHHHHHHccccc-cccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHHH
Q 048038 307 PNIDVIKKLFDA-IDENKDE-RLSASELKALIIGIRFE-EIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEKW 379 (591)
Q Consensus 307 ~~~~~Lr~lF~~-iD~n~DG-~Is~~ELk~~l~~~~~~-~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~~ 379 (591)
..+..+.++|++ .|+|+|| +|+.+||+..+.....+ ......+.+++++|+++|.|+||.|+|+||+.-+.+-
T Consensus 6 ~~i~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l 81 (89)
T cd05023 6 RCIESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGL 81 (89)
T ss_pred HHHHHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence 347789999999 8899987 99999999999875321 0112456899999999999999999999999766554
No 35
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=98.55 E-value=2.4e-07 Score=83.28 Aligned_cols=63 Identities=21% Similarity=0.352 Sum_probs=56.3
Q ss_pred cccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHH
Q 048038 306 EPNIDVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGI 376 (591)
Q Consensus 306 ~~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~ 376 (591)
+..+..++..|+.+|.|+||.|+.+||++.. +. +.+..++++++.+|.|+||.|+++||...+
T Consensus 44 ~~~~~~l~w~F~~lD~d~DG~Ls~~EL~~~~--l~------~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl 106 (116)
T cd00252 44 PMCKDPVGWMFNQLDGNYDGKLSHHELAPIR--LD------PNEHCIKPFFESCDLDKDGSISLDEWCYCF 106 (116)
T ss_pred HHHHHHHHHHHHHHCCCCCCcCCHHHHHHHH--cc------chHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 4567889999999999999999999999876 11 457889999999999999999999999988
No 36
>TIGR00845 caca sodium/calcium exchanger 1. This model is specific for the eukaryotic sodium ion/calcium ion exchangers of the Caca family
Probab=98.53 E-value=3.5e-07 Score=106.18 Aligned_cols=103 Identities=17% Similarity=0.200 Sum_probs=80.7
Q ss_pred CccccccccchhHHHHHHHHHHH-HHHHhHHHHHHHHHHHHhC-C-CccchhHHhhhcchhHHHHHHHhhcccchhhhhc
Q 048038 77 GFLPCTTTVLGNLFLIIVYGYLM-YVAATYLSNGSELLLEILG-P-GVVGGLFLPILGALPDAMLILVSGLSGTKETAQS 153 (591)
Q Consensus 77 g~~pc~~~~~g~~fli~v~g~ll-~~~a~~l~~g~e~L~~~lg-p-~iiG~~i~~~lgslPE~~i~l~s~l~~~~~~a~~ 153 (591)
-|.|=+.-..|. +.|+.+.+. ......+++++..++..+| | .++|.+++|++||+||++..++++..+ +
T Consensus 745 a~vPP~~~~~g~--~~f~~sI~~Ig~l~~~i~~~a~~ig~~~gi~~~viGlt~vA~GTSlPEl~~S~~aA~~~------~ 816 (928)
T TIGR00845 745 AFVPPTEYWGGW--ACFVVSILMIGVLTAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQD------Q 816 (928)
T ss_pred eecCChhHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHhhhheeeeEecCcHHHHHHHHHHHcC------C
Confidence 344544444443 445555555 7788899999999999999 4 699999999999999999966555432 3
Q ss_pred cceeehhhhhhHHHHHHHHHHHHHhhhccccccc
Q 048038 154 QVSVGMGLLAGSTVMLSTVIWGTCVVVGKCDLRE 187 (591)
Q Consensus 154 ~v~v~~G~l~GS~i~~ltli~G~~~l~g~~~~~~ 187 (591)
..++++||++|||++|+++++|++.++..+....
T Consensus 817 ~~d~aigNv~GSNifNi~l~lGv~~~i~~~~~~~ 850 (928)
T TIGR00845 817 YADASIGNVTGSNAVNVFLGIGVAWSIAAIYHAA 850 (928)
T ss_pred CCceeEEeecchHHHHHHHHHHHHHHHhhhhhcc
Confidence 3779999999999999999999999998765543
No 37
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=98.52 E-value=1.9e-07 Score=87.68 Aligned_cols=74 Identities=26% Similarity=0.459 Sum_probs=67.5
Q ss_pred CcccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHHHHHH
Q 048038 305 GEPNIDVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEKWLNE 382 (591)
Q Consensus 305 ~~~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~~~~~ 382 (591)
+..+...++++|+.+|+|+||.|+.+||..+++.++.. ++++++.++++++|.|+||.|++.||+.-+.+-...
T Consensus 3 ~~~~~~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~----~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~ 76 (151)
T KOG0027|consen 3 SEEQILELKEAFQLFDKDGDGKISVEELGAVLRSLGQN----PTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEE 76 (151)
T ss_pred CHHHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCC----CCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhcc
Confidence 34567889999999999999999999999999999987 899999999999999999999999999988776543
No 38
>TIGR00378 cax calcium/proton exchanger (cax).
Probab=98.48 E-value=1.3e-06 Score=93.39 Aligned_cols=134 Identities=17% Similarity=0.244 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHHhhHHHHHHhHHHHHHhcCCCchhhhhhhhhccccchhHHHHHHHHHhccccccccccchhhhhhhHHH
Q 048038 439 VLMLLIGTIIAAAFADPLVDAVDNFSAATSIPSFFISFIALPFATNSSEAVSAIIFASRKKIRTASLTFSELYGAVTMNN 518 (591)
Q Consensus 439 v~~Ll~g~~~~~~~A~~lV~si~~~a~~~gIs~~~Is~iilPlats~~E~vsai~~A~k~k~~~as~t~s~i~g~v~m~n 518 (591)
...++...+.+.-.|++++++.+.+|+++| +.++|++++.+|| +||++.++.++.+++.+++ .|++..+|
T Consensus 19 ~~~F~~~~~aiipla~~l~~~~~~lA~~~g--~~vggl~~~~~gt-~pEL~vsi~A~~~g~~~i~-------~gnivGS~ 88 (349)
T TIGR00378 19 TLTFLFNFLAIIPLAAIMGNATEELADKAG--PTIGGLLNATFGN-AVELIVSIIALKEGLVRIV-------QASLTGSL 88 (349)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--chHHHHHHHhhcc-HHHHHHHHHHHHcCChhhh-------HHHHHHHH
Confidence 345667777888899999999999999999 7999999999999 9999999999999999998 45555556
Q ss_pred HHHHHHHHHHH-HhcCcccc---cchh-----HHHHHHHHHHHHHHHhc--------CC---ccchHHHHHHHHHHHHHH
Q 048038 519 ILCLSVFLALV-YARGLTWD---FSSE-----VLVILIVCLVMGAFASF--------RT---NFPLWTCSIAYALYPFSL 578 (591)
Q Consensus 519 ~l~l~vfl~lv-~~r~l~w~---fs~e-----vlvil~v~~~~~~~~~~--------r~---~~~~~~~~~~~~lY~~sl 578 (591)
+.++.+++|+. ...|+... |..+ ...++++++.+..+..+ .+ .+.+++|++++.+|.+|+
T Consensus 89 i~NllLilGls~liggl~~~~q~~~~~~a~~~~~ll~la~~~l~lp~~~~~~~~~~~~~~~~~ls~~~aiill~lY~~~L 168 (349)
T TIGR00378 89 LGNLLLVLGLCFFFGGLNYKQQTFNQTAARTNSSLLAIACVALLIPAARATLSHGKEDGKILNLSRGTSIVIIIVYVLFL 168 (349)
T ss_pred HHhHHHHHHHHHHHhccccceeecCHHHHHHHHHHHHHHHHHHHhhhHHHhcCCCccchHHHHHHHHHHHHHHHHHHHHH
Confidence 66677777763 33444322 3333 33444444333333111 11 367789999999999998
Q ss_pred HHHH
Q 048038 579 ALVY 582 (591)
Q Consensus 579 ~lv~ 582 (591)
...+
T Consensus 169 ~~~l 172 (349)
T TIGR00378 169 YFQL 172 (349)
T ss_pred HHHh
Confidence 7664
No 39
>PTZ00184 calmodulin; Provisional
Probab=98.47 E-value=4.1e-07 Score=83.70 Aligned_cols=74 Identities=18% Similarity=0.379 Sum_probs=65.6
Q ss_pred cCCcccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHHHH
Q 048038 303 DSGEPNIDVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEKWL 380 (591)
Q Consensus 303 ~~~~~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~~~ 380 (591)
+.++++.+.+++.|+.+|.|++|.|+.+|++.++...+.+ +.++++.++++.+|.|++|.|+|+||++.+..+.
T Consensus 4 ~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~----~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~ 77 (149)
T PTZ00184 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN----PTEAELQDMINEVDADGNGTIDFPEFLTLMARKM 77 (149)
T ss_pred ccCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCC----CCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhc
Confidence 4566788999999999999999999999999999877654 5578999999999999999999999999887654
No 40
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=98.44 E-value=4.5e-07 Score=85.45 Aligned_cols=76 Identities=21% Similarity=0.442 Sum_probs=70.4
Q ss_pred cccCCcccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHHHH
Q 048038 301 LTDSGEPNIDVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEKWL 380 (591)
Q Consensus 301 ~~~~~~~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~~~ 380 (591)
.++.++++++++++.|..+|+|+||.|+..||...++.+|++ +.+.++.++++.+|. +++.|+|.||+..+....
T Consensus 11 ~~~~t~~qi~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~----~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~ 85 (160)
T COG5126 11 FTQLTEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFN----PSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKL 85 (160)
T ss_pred cccCCHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCC----CcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHh
Confidence 445678899999999999999999999999999999999987 899999999999999 999999999999998776
Q ss_pred H
Q 048038 381 N 381 (591)
Q Consensus 381 ~ 381 (591)
.
T Consensus 86 ~ 86 (160)
T COG5126 86 K 86 (160)
T ss_pred c
Confidence 4
No 41
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.38 E-value=8.7e-07 Score=68.05 Aligned_cols=60 Identities=25% Similarity=0.481 Sum_probs=54.8
Q ss_pred HHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHH
Q 048038 312 IKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFING 375 (591)
Q Consensus 312 Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a 375 (591)
++++|+.+|.|++|.|+.+|++.+++..+.. ..++++.++++.+|.+++|.|+++||...
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~ef~~~ 61 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLGEG----LSEEEIDEMIREVDKDGDGKIDFEEFLEL 61 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCC----CCHHHHHHHHHHhCCCCCCeEeHHHHHHH
Confidence 6789999999999999999999999988754 67889999999999999999999999864
No 42
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.33 E-value=8e-07 Score=68.39 Aligned_cols=53 Identities=23% Similarity=0.530 Sum_probs=46.8
Q ss_pred CCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHH
Q 048038 323 KDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEK 378 (591)
Q Consensus 323 ~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~ 378 (591)
++|.|+.+|++.++..+|.+. ..+++++.+++.+|.|+||.|+|+||+..+.+
T Consensus 1 ~~G~i~~~~~~~~l~~~g~~~---~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 1 KDGKITREEFRRALSKLGIKD---LSEEEVDRLFREFDTDGDGYISFDEFISMMQR 53 (54)
T ss_dssp SSSEEEHHHHHHHHHHTTSSS---SCHHHHHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred CcCEECHHHHHHHHHHhCCCC---CCHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence 489999999999997776542 67888999999999999999999999998764
No 43
>PTZ00183 centrin; Provisional
Probab=98.33 E-value=1.2e-06 Score=81.68 Aligned_cols=72 Identities=24% Similarity=0.466 Sum_probs=64.1
Q ss_pred cCCcccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHH
Q 048038 303 DSGEPNIDVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEK 378 (591)
Q Consensus 303 ~~~~~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~ 378 (591)
..++++...+++.|+.+|.|+||.|+.+|++.+++..+.. ..+++++++++.+|.|++|.|+|.||+..+..
T Consensus 10 ~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~~----~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~ 81 (158)
T PTZ00183 10 GLTEDQKKEIREAFDLFDTDGSGTIDPKELKVAMRSLGFE----PKKEEIKQMIADVDKDGSGKIDFEEFLDIMTK 81 (158)
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCC----CCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 3466788999999999999999999999999999988754 56788999999999999999999999998754
No 44
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=98.30 E-value=2.2e-06 Score=73.21 Aligned_cols=75 Identities=21% Similarity=0.291 Sum_probs=60.2
Q ss_pred ccHHHHHHHhhhhcCC--CCCCcCHHHHHHHHHc-cccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHHHHH
Q 048038 307 PNIDVIKKLFDAIDEN--KDERLSASELKALIIG-IRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEKWLN 381 (591)
Q Consensus 307 ~~~~~Lr~lF~~iD~n--~DG~Is~~ELk~~l~~-~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~~~~ 381 (591)
..+..+-+.|++.+.+ ++|.|+.+|++..+.. ++........+++++++|+.+|.|+||.|+|+||+..+.+...
T Consensus 5 ~~i~~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~~~~ 82 (88)
T cd05030 5 KAIETIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIKVGV 82 (88)
T ss_pred HHHHHHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHHH
Confidence 3467889999999976 4899999999999974 3332111234899999999999999999999999998876644
No 45
>PTZ00183 centrin; Provisional
Probab=98.26 E-value=2.5e-06 Score=79.52 Aligned_cols=68 Identities=22% Similarity=0.336 Sum_probs=60.4
Q ss_pred ccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHH
Q 048038 307 PNIDVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEK 378 (591)
Q Consensus 307 ~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~ 378 (591)
...+.++++|+.+|+|++|.|+.+|++.++...+.. ..+++++.+|..+|.|++|.|+|+||.+.+.+
T Consensus 87 ~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~----l~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 154 (158)
T PTZ00183 87 DPREEILKAFRLFDDDKTGKISLKNLKRVAKELGET----ITDEELQEMIDEADRNGDGEISEEEFYRIMKK 154 (158)
T ss_pred CcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCC----CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 345789999999999999999999999999877754 67889999999999999999999999887654
No 46
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=98.23 E-value=1.8e-06 Score=91.14 Aligned_cols=71 Identities=20% Similarity=0.349 Sum_probs=64.8
Q ss_pred cHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHH
Q 048038 308 NIDVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEK 378 (591)
Q Consensus 308 ~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~ 378 (591)
+...|..+|+.+|.|++|.||.+|++++.+-++.+......++++.++-+.+|.|+||.||.+||++|++-
T Consensus 545 ~ks~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~IDlNEfLeAFrl 615 (631)
T KOG0377|consen 545 NKSSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKIDLNEFLEAFRL 615 (631)
T ss_pred chhhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcccHHHHHHHHhh
Confidence 36678899999999999999999999999888877767789999999999999999999999999999854
No 47
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=98.19 E-value=2.8e-06 Score=82.54 Aligned_cols=72 Identities=26% Similarity=0.351 Sum_probs=59.4
Q ss_pred ccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHcccc-ccc--cccchHHHHHHHhhcCCCCCCCCChhHHHHHHHH
Q 048038 307 PNIDVIKKLFDAIDENKDERLSASELKALIIGIRF-EEI--DLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEK 378 (591)
Q Consensus 307 ~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~-~~~--~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~ 378 (591)
.+.++++=.|+.+|.|+||.|+.+|+++.+..+-. +.. +...++.++++|.++|.|+||.|+++||.+...+
T Consensus 101 ~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~~ 175 (187)
T KOG0034|consen 101 SKREKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDGDGKISFEEFCKVVEK 175 (187)
T ss_pred cHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHc
Confidence 34479999999999999999999999998877643 222 2344566799999999999999999999988755
No 48
>PTZ00184 calmodulin; Provisional
Probab=98.18 E-value=4e-06 Score=77.03 Aligned_cols=66 Identities=23% Similarity=0.423 Sum_probs=58.9
Q ss_pred cHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHH
Q 048038 308 NIDVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIE 377 (591)
Q Consensus 308 ~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~ 377 (591)
..+.++.+|+.+|.|++|.|+.+|++.+++..+.. ..+++++++++.+|.|++|.|+|.||+..+.
T Consensus 82 ~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~----~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 147 (149)
T PTZ00184 82 SEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGEK----LTDEEVDEMIREADVDGDGQINYEEFVKMMM 147 (149)
T ss_pred HHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCCC----CCHHHHHHHHHhcCCCCCCcCcHHHHHHHHh
Confidence 34678999999999999999999999999887654 5788999999999999999999999987654
No 49
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=98.03 E-value=1.8e-05 Score=73.68 Aligned_cols=66 Identities=23% Similarity=0.392 Sum_probs=61.7
Q ss_pred cHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHH
Q 048038 308 NIDVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIE 377 (591)
Q Consensus 308 ~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~ 377 (591)
..+.+++.|+.+|.|++|+|+..+|+...+.+|-+ .+|+|+.++++++|.|+||.|+.+||++-+.
T Consensus 104 t~eEi~~afrl~D~D~~Gkis~~~lkrvakeLgen----ltD~El~eMIeEAd~d~dgevneeEF~~imk 169 (172)
T KOG0028|consen 104 TKEEIKKAFRLFDDDKTGKISQRNLKRVAKELGEN----LTDEELMEMIEEADRDGDGEVNEEEFIRIMK 169 (172)
T ss_pred cHHHHHHHHHcccccCCCCcCHHHHHHHHHHhCcc----ccHHHHHHHHHHhcccccccccHHHHHHHHh
Confidence 68899999999999999999999999999999976 7899999999999999999999999987554
No 50
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.00 E-value=5.9e-06 Score=88.09 Aligned_cols=132 Identities=14% Similarity=0.208 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHHhhHHHHHHhHHHHHHhcCCCchhhhhhhhhccccchhHHHHHHH--HHhccccccccccchhhhhhhH
Q 048038 439 VLMLLIGTIIAAAFADPLVDAVDNFSAATSIPSFFISFIALPFATNSSEAVSAIIF--ASRKKIRTASLTFSELYGAVTM 516 (591)
Q Consensus 439 v~~Ll~g~~~~~~~A~~lV~si~~~a~~~gIs~~~Is~iilPlats~~E~vsai~~--A~k~k~~~as~t~s~i~g~v~m 516 (591)
+++++. +++.++=|++|.+++.+.+.+|||+-+.|-+..+.|+|+||+.++++- -.++...+- .| .+.+.
T Consensus 64 ~iYmFv--ALAIVCDefFVPSL~vItEkL~iSdDVAGATFMAAGgSAPElFTSvIGVFIt~~dVGiG-----TI-VGSAv 135 (588)
T KOG1307|consen 64 LIYMFV--ALAIVCDEFFVPSLDVITEKLGISDDVAGATFMAAGGSAPELFTSVIGVFITQGDVGIG-----TI-VGSAV 135 (588)
T ss_pred HHHHHH--HHHHHhcccccccHHHHHHHhcCcccccchhhhhccCCchHHhhhheeEEEecCCccee-----ee-eehhh
Confidence 344444 455668899999999999999999999999999999999999999974 334433322 22 22333
Q ss_pred HHHHHHHHHHHHHHhc--Ccccccch-hHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHH
Q 048038 517 NNILCLSVFLALVYAR--GLTWDFSS-EVLVILIVCLVMGAFASFRTNFPLWTCSIAYALYPFSLA 579 (591)
Q Consensus 517 ~n~l~l~vfl~lv~~r--~l~w~fs~-evlvil~v~~~~~~~~~~r~~~~~~~~~~~~~lY~~sl~ 579 (591)
=|++|+.-+.++.--+ .|||-.=. ++..-. +.++|-.+........||++++++++|..|.+
T Consensus 136 FNIL~Vig~C~LFSrqvl~LtWWPLfRD~sfY~-lsl~~Li~Ff~D~~I~WwEaL~L~~~Yi~Yv~ 200 (588)
T KOG1307|consen 136 FNILCVIGVCGLFSRQVLNLTWWPLFRDVSFYT-LSLIMLIYFFLDELIMWWEALALLLMYISYVV 200 (588)
T ss_pred hhHHHHHHHHHhhcccccccccchhhhhhHHHH-HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhe
Confidence 4666765555554322 45664332 333222 23333333345778899999999999987764
No 51
>PF14658 EF-hand_9: EF-hand domain
Probab=97.96 E-value=1.6e-05 Score=63.70 Aligned_cols=64 Identities=17% Similarity=0.456 Sum_probs=58.7
Q ss_pred HHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCC-CCCChhHHHHHHHHHH
Q 048038 314 KLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSND-SHIDIKEFINGIEKWL 380 (591)
Q Consensus 314 ~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~d-G~Id~~EFl~a~~~~~ 380 (591)
..|+.+|.++.|.+...+++..|+.++.. .+.|++++.+.+.+|.++. |.|+++.|+..+++|.
T Consensus 2 ~~F~~fD~~~tG~V~v~~l~~~Lra~~~~---~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~~wi 66 (66)
T PF14658_consen 2 TAFDAFDTQKTGRVPVSDLITYLRAVTGR---SPEESELQDLINELDPEGRDGSVNFDTFLAIMRDWI 66 (66)
T ss_pred cchhhcCCcCCceEeHHHHHHHHHHHcCC---CCcHHHHHHHHHHhCCCCCCceEeHHHHHHHHHHhC
Confidence 36999999999999999999999999862 2889999999999999997 9999999999999993
No 52
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=97.95 E-value=2.8e-05 Score=76.00 Aligned_cols=69 Identities=16% Similarity=0.331 Sum_probs=63.4
Q ss_pred HHHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHHHHH
Q 048038 309 IDVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEKWLN 381 (591)
Q Consensus 309 ~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~~~~ 381 (591)
+.+=|++|+.+|+|++|+|+..||++++..+|+. ..++-.+.+++++|.-++|+|++++|+..|.....
T Consensus 123 i~~Wr~vF~~~D~D~SG~I~~sEL~~Al~~~Gy~----Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv~L~~ 191 (221)
T KOG0037|consen 123 INQWRNVFRTYDRDRSGTIDSSELRQALTQLGYR----LSPQFYNLLVRKYDRFGGGRIDFDDFIQCCVVLQR 191 (221)
T ss_pred HHHHHHHHHhcccCCCCcccHHHHHHHHHHcCcC----CCHHHHHHHHHHhccccCCceeHHHHHHHHHHHHH
Confidence 6667889999999999999999999999999987 77889999999999999999999999999977654
No 53
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=97.93 E-value=2.3e-05 Score=72.93 Aligned_cols=75 Identities=24% Similarity=0.399 Sum_probs=68.4
Q ss_pred CCcccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHHHHHH
Q 048038 304 SGEPNIDVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEKWLNE 382 (591)
Q Consensus 304 ~~~~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~~~~~ 382 (591)
..+++...++..|+.+|.|++|+|+.+||+-+++..|++ +..+|+.+++.+.|.++.|.|+|++|..-+..|+-+
T Consensus 27 l~~~q~q~i~e~f~lfd~~~~g~iD~~EL~vAmralGFE----~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e 101 (172)
T KOG0028|consen 27 LTEEQKQEIKEAFELFDPDMAGKIDVEELKVAMRALGFE----PKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLGE 101 (172)
T ss_pred ccHHHHhhHHHHHHhhccCCCCcccHHHHHHHHHHcCCC----cchHHHHHHHHhhhhccCceechHHHHHHHHHHHhc
Confidence 345667899999999999999999999999999999987 788999999999999999999999999998877643
No 54
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=97.90 E-value=3.3e-05 Score=66.17 Aligned_cols=71 Identities=17% Similarity=0.276 Sum_probs=54.5
Q ss_pred cHHHHHHHhhhhcCCCCCCcCHHHHHHHHHc-cccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHHH
Q 048038 308 NIDVIKKLFDAIDENKDERLSASELKALIIG-IRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEKW 379 (591)
Q Consensus 308 ~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~-~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~~ 379 (591)
.+..|-.+|+++-.| +++++..||+.+++. +..-..+...++.++++|+..|.|+||.|||.||+.-+.+-
T Consensus 6 ai~~lI~~FhkYaG~-~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~l 77 (91)
T cd05024 6 SMEKMMLTFHKFAGE-KNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDDCRDGKVGFQSFFSLIAGL 77 (91)
T ss_pred HHHHHHHHHHHHcCC-CCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 366788899999844 569999999998854 22111112357789999999999999999999999876554
No 55
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=97.78 E-value=3.3e-05 Score=75.28 Aligned_cols=72 Identities=22% Similarity=0.352 Sum_probs=57.1
Q ss_pred HHHHHHHhhhhcCCCCCCcCHHHHHHHHHcc----cc---ccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHHHH
Q 048038 309 IDVIKKLFDAIDENKDERLSASELKALIIGI----RF---EEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEKWL 380 (591)
Q Consensus 309 ~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~----~~---~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~~~ 380 (591)
.++++=.|+.+|.|+||+|+.+|+-..++.+ +. +......++.++++++.+|.|+||.++++||+.++..-.
T Consensus 99 eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~d~ 177 (193)
T KOG0044|consen 99 EEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGKLTLEEFIEGCKADP 177 (193)
T ss_pred HHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCCcccHHHHHHHhhhCH
Confidence 4566677999999999999999998765433 21 122234678899999999999999999999999986643
No 56
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=97.78 E-value=2.7e-05 Score=82.15 Aligned_cols=66 Identities=17% Similarity=0.368 Sum_probs=60.5
Q ss_pred ccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHH
Q 048038 307 PNIDVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGI 376 (591)
Q Consensus 307 ~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~ 376 (591)
+.+.++.++|+.+|.|+||+|..+|+.+.++.++.+ .++++++++++..|.|+++.|+++||-.-.
T Consensus 79 ~~E~~l~~~F~~iD~~hdG~i~~~Ei~~~l~~~gi~----l~de~~~k~~e~~d~~g~~~I~~~e~rd~~ 144 (463)
T KOG0036|consen 79 NKELELYRIFQSIDLEHDGKIDPNEIWRYLKDLGIQ----LSDEKAAKFFEHMDKDGKATIDLEEWRDHL 144 (463)
T ss_pred HhHHHHHHHHhhhccccCCccCHHHHHHHHHHhCCc----cCHHHHHHHHHHhccCCCeeeccHHHHhhh
Confidence 447789999999999999999999999999999987 789999999999999999999999986544
No 57
>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]
Probab=97.78 E-value=2.8e-05 Score=74.72 Aligned_cols=70 Identities=19% Similarity=0.338 Sum_probs=61.3
Q ss_pred CcccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHH
Q 048038 305 GEPNIDVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEK 378 (591)
Q Consensus 305 ~~~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~ 378 (591)
+..+++.....|+.+|.|.||+|+..|||..+.++|-+ .+---++.+|++.|-|.||+|+|-||+--..+
T Consensus 94 srkqIk~~~~~Fk~yDe~rDgfIdl~ELK~mmEKLgap----QTHL~lK~mikeVded~dgklSfreflLIfrk 163 (244)
T KOG0041|consen 94 SRKQIKDAESMFKQYDEDRDGFIDLMELKRMMEKLGAP----QTHLGLKNMIKEVDEDFDGKLSFREFLLIFRK 163 (244)
T ss_pred HHHHHHHHHHHHHHhcccccccccHHHHHHHHHHhCCc----hhhHHHHHHHHHhhcccccchhHHHHHHHHHH
Confidence 45568889999999999999999999999999999865 55567899999999999999999999865443
No 58
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=97.71 E-value=3e-05 Score=52.24 Aligned_cols=26 Identities=23% Similarity=0.520 Sum_probs=17.0
Q ss_pred HHHHhhhhcCCCCCCcCHHHHHHHHH
Q 048038 312 IKKLFDAIDENKDERLSASELKALII 337 (591)
Q Consensus 312 Lr~lF~~iD~n~DG~Is~~ELk~~l~ 337 (591)
++++|+.+|+|+||+|+.+|++++++
T Consensus 2 ~~~~F~~~D~d~dG~I~~~Ef~~~~~ 27 (29)
T PF00036_consen 2 LKEAFREFDKDGDGKIDFEEFKEMMK 27 (29)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHH
Confidence 45666666666666666666666654
No 59
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=97.70 E-value=0.00011 Score=68.19 Aligned_cols=69 Identities=19% Similarity=0.307 Sum_probs=62.3
Q ss_pred CcccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHH
Q 048038 305 GEPNIDVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIE 377 (591)
Q Consensus 305 ~~~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~ 377 (591)
+..-.+.+...|+.+|.+++|+|..+.++++|...|-. ..++||+++++.+-.|..|.+||.+|...+.
T Consensus 96 gtdpe~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~gDr----~~~eEV~~m~r~~p~d~~G~~dy~~~~~~it 164 (171)
T KOG0031|consen 96 GTDPEEVILNAFKTFDDEGSGKIDEDYLRELLTTMGDR----FTDEEVDEMYREAPIDKKGNFDYKAFTYIIT 164 (171)
T ss_pred CCCHHHHHHHHHHhcCccCCCccCHHHHHHHHHHhccc----CCHHHHHHHHHhCCcccCCceeHHHHHHHHH
Confidence 34458899999999999999999999999999987754 7899999999999999999999999987764
No 60
>PLN02964 phosphatidylserine decarboxylase
Probab=97.66 E-value=7.2e-05 Score=85.06 Aligned_cols=67 Identities=18% Similarity=0.231 Sum_probs=60.6
Q ss_pred HHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHHHH
Q 048038 310 DVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEKWL 380 (591)
Q Consensus 310 ~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~~~ 380 (591)
..++++|+.+|.|+||.|+.+|+.+++..++.. ..++++.+.|+.+|.|+||.|+++||...+.+|.
T Consensus 179 ~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg~~----~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~~~ 245 (644)
T PLN02964 179 SFARRILAIVDYDEDGQLSFSEFSDLIKAFGNL----VAANKKEELFKAADLNGDGVVTIDELAALLALQQ 245 (644)
T ss_pred HHHHHHHHHhCCCCCCeEcHHHHHHHHHHhccC----CCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhcc
Confidence 348999999999999999999999999877643 6788999999999999999999999999988874
No 61
>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]
Probab=97.66 E-value=8e-05 Score=80.59 Aligned_cols=79 Identities=11% Similarity=0.269 Sum_probs=70.2
Q ss_pred ccCCcccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHHHHH
Q 048038 302 TDSGEPNIDVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEKWLN 381 (591)
Q Consensus 302 ~~~~~~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~~~~ 381 (591)
.+.+++|...+++-|.++| |++|+++..|+.+++.+.+... ....++|+++++...+.|.||+++++||+..+.+-+.
T Consensus 11 ~~~tq~El~~l~~kF~~~d-~~~G~v~~~~l~~~f~k~~~~~-g~~~~eei~~~l~~~~~~~~g~v~fe~f~~~~~~l~s 88 (627)
T KOG0046|consen 11 SQLTQEELRELKEKFNKLD-DQKGYVTVYELPDAFKKAKLPL-GYFVREEIKEILGEVGVDADGRVEFEEFVGIFLNLKS 88 (627)
T ss_pred ccccHHHHHHHHHHHHhhc-CCCCeeehHHhHHHHHHhcccc-cchhHHHHHHHHhccCCCcCCccCHHHHHHHHHhhhh
Confidence 3557789999999999999 9999999999999999888654 5567999999999999999999999999998877654
Q ss_pred H
Q 048038 382 E 382 (591)
Q Consensus 382 ~ 382 (591)
.
T Consensus 89 ~ 89 (627)
T KOG0046|consen 89 K 89 (627)
T ss_pred h
Confidence 3
No 62
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=97.64 E-value=0.00017 Score=63.68 Aligned_cols=70 Identities=16% Similarity=0.331 Sum_probs=60.2
Q ss_pred CCcccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHHHH
Q 048038 304 SGEPNIDVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEKWL 380 (591)
Q Consensus 304 ~~~~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~~~ 380 (591)
.+++|..+.+++|+..|. +||.|+-++.++.+.+.+. ..+.+.+|++-.|.|+||++|++||+.|+.--.
T Consensus 4 ls~~e~~~y~~~F~~l~~-~~g~isg~~a~~~f~~S~L------~~~~L~~IW~LaD~~~dG~L~~~EF~iAm~Li~ 73 (104)
T PF12763_consen 4 LSPEEKQKYDQIFQSLDP-QDGKISGDQAREFFMKSGL------PRDVLAQIWNLADIDNDGKLDFEEFAIAMHLIN 73 (104)
T ss_dssp -SCCHHHHHHHHHHCTSS-STTEEEHHHHHHHHHHTTS------SHHHHHHHHHHH-SSSSSEEEHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCC-CCCeEeHHHHHHHHHHcCC------CHHHHHHHHhhhcCCCCCcCCHHHHHHHHHHHH
Confidence 356789999999999995 7899999999999988774 468999999999999999999999999986543
No 63
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=97.62 E-value=4.3e-05 Score=51.45 Aligned_cols=28 Identities=29% Similarity=0.593 Sum_probs=25.6
Q ss_pred HHHHHHhhcCCCCCCCCChhHHHHHHHH
Q 048038 351 AVSKVLSDFDTSNDSHIDIKEFINGIEK 378 (591)
Q Consensus 351 ev~~lm~~~D~d~dG~Id~~EFl~a~~~ 378 (591)
|++++|+.+|.|+||+|+++||...+.+
T Consensus 1 E~~~~F~~~D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 1 ELKEAFREFDKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 6789999999999999999999998764
No 64
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=97.53 E-value=7.1e-05 Score=50.98 Aligned_cols=30 Identities=20% Similarity=0.427 Sum_probs=25.6
Q ss_pred HHHHHhhhhcCCCCCCcCHHHHHHHHH-ccc
Q 048038 311 VIKKLFDAIDENKDERLSASELKALII-GIR 340 (591)
Q Consensus 311 ~Lr~lF~~iD~n~DG~Is~~ELk~~l~-~~~ 340 (591)
+++++|+.+|+|+||+|+.+|++.+++ .+|
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~~~lG 31 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILRKSLG 31 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHHHHTT
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHHHhcC
Confidence 478999999999999999999999988 453
No 65
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=97.49 E-value=0.00026 Score=75.01 Aligned_cols=72 Identities=19% Similarity=0.288 Sum_probs=60.3
Q ss_pred CcccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHHH
Q 048038 305 GEPNIDVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEKW 379 (591)
Q Consensus 305 ~~~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~~ 379 (591)
.++...+++.+|+.+|.++||.++.+++.+++..++.+ .+.++....+++.+|.|.||.+||+||-+-+.+.
T Consensus 9 ~~er~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~---~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~~ 80 (463)
T KOG0036|consen 9 DEERDIRIRCLFKELDSKNDGQVDLDQLEKGLEKLDHP---KPNYEAAKMLFSAMDANRDGRVDYSEFKRYLDNK 80 (463)
T ss_pred cHHHHHHHHHHHHHhccCCCCceeHHHHHHHHHhcCCC---CCchHHHHHHHHhcccCcCCcccHHHHHHHHHHh
Confidence 34556689999999999999999999999988887764 2667888999999999999999999998766543
No 66
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=97.45 E-value=0.00026 Score=65.69 Aligned_cols=71 Identities=17% Similarity=0.350 Sum_probs=62.5
Q ss_pred cCCcccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHHHHH
Q 048038 303 DSGEPNIDVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEKWLN 381 (591)
Q Consensus 303 ~~~~~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~~~~ 381 (591)
...+.++..+|+.|..+|+|+||.|.+++|+..+..+|.. ..+++++.+|++ ..|-|+|+-|+..+-..++
T Consensus 25 mf~q~QIqEfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~----~~d~elDaM~~E----a~gPINft~FLTmfGekL~ 95 (171)
T KOG0031|consen 25 MFDQSQIQEFKEAFNLMDQNRDGFIDKEDLRDMLASLGKI----ASDEELDAMMKE----APGPINFTVFLTMFGEKLN 95 (171)
T ss_pred HhhHHHHHHHHHHHHHHhccCCCcccHHHHHHHHHHcCCC----CCHHHHHHHHHh----CCCCeeHHHHHHHHHHHhc
Confidence 3456789999999999999999999999999999999875 789999999986 4789999999998877664
No 67
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=97.40 E-value=0.00013 Score=47.39 Aligned_cols=24 Identities=29% Similarity=0.552 Sum_probs=20.5
Q ss_pred HHHHhhhhcCCCCCCcCHHHHHHH
Q 048038 312 IKKLFDAIDENKDERLSASELKAL 335 (591)
Q Consensus 312 Lr~lF~~iD~n~DG~Is~~ELk~~ 335 (591)
|++.|+.+|.|+||.|+.+|+++.
T Consensus 1 l~~~F~~~D~d~DG~is~~E~~~~ 24 (25)
T PF13202_consen 1 LKDAFQQFDTDGDGKISFEEFQRL 24 (25)
T ss_dssp HHHHHHHHTTTSSSEEEHHHHHHH
T ss_pred CHHHHHHHcCCCCCcCCHHHHHHH
Confidence 567899999999999999998874
No 68
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=97.36 E-value=0.00076 Score=61.62 Aligned_cols=73 Identities=11% Similarity=0.251 Sum_probs=61.3
Q ss_pred hcccCCcccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHH
Q 048038 300 LLTDSGEPNIDVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIE 377 (591)
Q Consensus 300 l~~~~~~~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~ 377 (591)
+.++..+-..+..-+-.+.+|++++|.|.-.|||..|..+|-. .+++|+++++.-. .|.||.|+|++|+..++
T Consensus 78 vaknk~q~t~edfvegLrvFDkeg~G~i~~aeLRhvLttlGek----l~eeEVe~Llag~-eD~nG~i~YE~fVk~i~ 150 (152)
T KOG0030|consen 78 VAKNKDQGTYEDFVEGLRVFDKEGNGTIMGAELRHVLTTLGEK----LTEEEVEELLAGQ-EDSNGCINYEAFVKHIM 150 (152)
T ss_pred HHhccccCcHHHHHHHHHhhcccCCcceeHHHHHHHHHHHHhh----ccHHHHHHHHccc-cccCCcCcHHHHHHHHh
Confidence 3333345567777888899999999999999999999999876 7899999999875 47789999999998765
No 69
>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=97.33 E-value=0.00055 Score=81.36 Aligned_cols=95 Identities=14% Similarity=0.263 Sum_probs=75.8
Q ss_pred hHHHHHHhhhhhhhhcccCCcccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccc---cchHHHHHHHhhcCCC
Q 048038 286 SGILKHLRQRALGRLLTDSGEPNIDVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDL---DQDDAVSKVLSDFDTS 362 (591)
Q Consensus 286 ~~il~~lk~~~l~~l~~~~~~~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~---~~~~ev~~lm~~~D~d 362 (591)
.++.+++.+..-.+-.+..+++......-+|+.||++++|.++.++++.|++..|++-+.. ..+.+.+++|...|.+
T Consensus 2229 ~rMqhnlEQqIqarn~~GVtEe~L~EFs~~fkhFDkek~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~ 2308 (2399)
T KOG0040|consen 2229 MRMQHNLEQQIQARNHNGVTEEQLKEFSMMFKHFDKEKNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPN 2308 (2399)
T ss_pred HHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHhchhhccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCC
Confidence 3444444444333344455778889999999999999999999999999999999865433 3466999999999999
Q ss_pred CCCCCChhHHHHHHHHHH
Q 048038 363 NDSHIDIKEFINGIEKWL 380 (591)
Q Consensus 363 ~dG~Id~~EFl~a~~~~~ 380 (591)
.+|+|+..||++-+.+.-
T Consensus 2309 r~G~Vsl~dY~afmi~~E 2326 (2399)
T KOG0040|consen 2309 RDGYVSLQDYMAFMISKE 2326 (2399)
T ss_pred CcCcccHHHHHHHHHhcc
Confidence 999999999999988754
No 70
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=97.32 E-value=0.00042 Score=74.87 Aligned_cols=59 Identities=22% Similarity=0.325 Sum_probs=51.1
Q ss_pred CcccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHHHH
Q 048038 305 GEPNIDVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEKWL 380 (591)
Q Consensus 305 ~~~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~~~ 380 (591)
.+.-...++.+|+.+|.|+||.|+.+|+.. .+.+|+.+|.|+||.|+++||..++..-.
T Consensus 329 ~~~~~~~l~~aF~~~D~dgdG~Is~~E~~~-----------------~~~~F~~~D~d~DG~Is~eEf~~~~~~~~ 387 (391)
T PRK12309 329 GEAFTHAAQEIFRLYDLDGDGFITREEWLG-----------------SDAVFDALDLNHDGKITPEEMRAGLGAAL 387 (391)
T ss_pred cChhhHHHHHHHHHhCCCCCCcCcHHHHHH-----------------HHHHHHHhCCCCCCCCcHHHHHHHHHHHH
Confidence 345678899999999999999999999831 46889999999999999999999886543
No 71
>PLN02964 phosphatidylserine decarboxylase
Probab=97.32 E-value=0.00033 Score=79.74 Aligned_cols=67 Identities=13% Similarity=0.326 Sum_probs=57.7
Q ss_pred CcccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHcccc-ccccccchHH---HHHHHhhcCCCCCCCCChhHHHHHHHHH
Q 048038 305 GEPNIDVIKKLFDAIDENKDERLSASELKALIIGIRF-EEIDLDQDDA---VSKVLSDFDTSNDSHIDIKEFINGIEKW 379 (591)
Q Consensus 305 ~~~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~-~~~~~~~~~e---v~~lm~~~D~d~dG~Id~~EFl~a~~~~ 379 (591)
.+.+.+.+++.|+.+|+|+||++ ++.+++.++. . +.+++ ++++++.+|.|+||.|+++||+..+...
T Consensus 138 ~~kqi~elkeaF~lfD~dgdG~i----Lg~ilrslG~~~----pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~l 208 (644)
T PLN02964 138 VTQEPESACESFDLLDPSSSNKV----VGSIFVSCSIED----PVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAF 208 (644)
T ss_pred cHHHHHHHHHHHHHHCCCCCCcC----HHHHHHHhCCCC----CCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHh
Confidence 55678999999999999999997 8888888884 3 45555 8999999999999999999999988753
No 72
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=97.14 E-value=0.00014 Score=65.25 Aligned_cols=64 Identities=27% Similarity=0.328 Sum_probs=49.2
Q ss_pred CcccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHH
Q 048038 305 GEPNIDVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFIN 374 (591)
Q Consensus 305 ~~~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~ 374 (591)
.......+.=.|..+|.|+||.|+..|++.....+. +.+..+...++..|.|+||.|+..|+..
T Consensus 49 ~~~~~~~~~W~F~~LD~n~d~~L~~~El~~l~~~l~------~~e~C~~~F~~~CD~n~d~~Is~~EW~~ 112 (113)
T PF10591_consen 49 YSECKRVVHWKFCQLDRNKDGVLDRSELKPLRRPLM------PPEHCARPFFRSCDVNKDGKISLDEWCN 112 (113)
T ss_dssp GGGGHHHHHHHHHHH--T-SSEE-TTTTGGGGSTTS------TTGGGHHHHHHHH-TT-SSSEEHHHHHH
T ss_pred hhhhhhhhhhhHhhhcCCCCCccCHHHHHHHHHHHh------hhHHHHHHHHHHcCCCCCCCCCHHHHcc
Confidence 456678899999999999999999999998765442 4567899999999999999999999864
No 73
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=97.13 E-value=0.00074 Score=61.68 Aligned_cols=71 Identities=20% Similarity=0.299 Sum_probs=63.2
Q ss_pred CcccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCC--CCCCCChhHHHHHHHHH
Q 048038 305 GEPNIDVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTS--NDSHIDIKEFINGIEKW 379 (591)
Q Consensus 305 ~~~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d--~dG~Id~~EFl~a~~~~ 379 (591)
++++...+|++|.-+|+++||+|+.+..-++++.+|.+ |++.|+.+.+.+.+.+ +--+|+|++|+--...-
T Consensus 6 ~~d~~~e~ke~F~lfD~~gD~ki~~~q~gdvlRalG~n----PT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~v 78 (152)
T KOG0030|consen 6 TPDQMEEFKEAFLLFDRTGDGKISGSQVGDVLRALGQN----PTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQV 78 (152)
T ss_pred CcchHHHHHHHHHHHhccCcccccHHHHHHHHHHhcCC----CcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHH
Confidence 45678999999999999999999999999999999988 9999999999999988 56789999998754443
No 74
>KOG4065 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.11 E-value=0.00087 Score=59.14 Aligned_cols=63 Identities=27% Similarity=0.318 Sum_probs=47.5
Q ss_pred HHHhhhhcCCCCCCcCHHHHHHHHHcccc----cc--ccccchHHH----HHHHhhcCCCCCCCCChhHHHHH
Q 048038 313 KKLFDAIDENKDERLSASELKALIIGIRF----EE--IDLDQDDAV----SKVLSDFDTSNDSHIDIKEFING 375 (591)
Q Consensus 313 r~lF~~iD~n~DG~Is~~ELk~~l~~~~~----~~--~~~~~~~ev----~~lm~~~D~d~dG~Id~~EFl~a 375 (591)
-.-|++.|-|+||.|+-=|+..++....- +. .-..++.|+ +.++++-|.|+||.|||.||+++
T Consensus 70 fHYF~MHDldknn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDYgEflK~ 142 (144)
T KOG4065|consen 70 FHYFSMHDLDKNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDYGEFLKR 142 (144)
T ss_pred hhhhhhhccCcCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeHHHHHhh
Confidence 36799999999999999999988865432 11 112445554 55566779999999999999875
No 75
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=97.08 E-value=0.00065 Score=70.16 Aligned_cols=70 Identities=23% Similarity=0.322 Sum_probs=62.1
Q ss_pred cccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHHH
Q 048038 306 EPNIDVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEKW 379 (591)
Q Consensus 306 ~~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~~ 379 (591)
++..++++++|.++|.|+||.++.+|++.++...... ...+++.+-+...|.|+||.|+|+|+...+...
T Consensus 73 ee~~~rl~~l~~~iD~~~Dgfv~~~El~~wi~~s~k~----~v~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~ 142 (325)
T KOG4223|consen 73 EESQERLGKLVPKIDSDSDGFVTESELKAWIMQSQKK----YVVEEAARRWDEYDKNKDGFITWEEYLPQTYGR 142 (325)
T ss_pred chhHHHHHHHHhhhcCCCCCceeHHHHHHHHHHHHHH----HHHHHHHHHHHHhccCccceeeHHHhhhhhhhc
Confidence 4468899999999999999999999999999876654 567889999999999999999999999988754
No 76
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=97.01 E-value=0.001 Score=65.03 Aligned_cols=70 Identities=14% Similarity=0.179 Sum_probs=55.4
Q ss_pred ccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHHHH
Q 048038 307 PNIDVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEKWL 380 (591)
Q Consensus 307 ~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~~~ 380 (591)
....-.+.+|+.+|.|+||.|+..|+..++.-.... ..++..+=.|+-.|.|+||+|++.|++.-+..-.
T Consensus 61 d~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~rG----t~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~ 130 (193)
T KOG0044|consen 61 DASKYAELVFRTFDKNKDGTIDFLEFICALSLTSRG----TLEEKLKWAFRLYDLDGDGYITKEEMLKIVQAIY 130 (193)
T ss_pred CHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcCC----cHHHHhhhhheeecCCCCceEcHHHHHHHHHHHH
Confidence 446667899999999999999999988777554332 3455666678999999999999999988765443
No 77
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=96.98 E-value=0.00086 Score=69.26 Aligned_cols=69 Identities=25% Similarity=0.359 Sum_probs=55.5
Q ss_pred HHHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHHHH
Q 048038 309 IDVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEKWL 380 (591)
Q Consensus 309 ~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~~~ 380 (591)
..+=++-|+.-|.|+||.++.+|+.+.+..-..+ ...+--+.+-|..+|.|+||+|+++||+..+.+--
T Consensus 162 ~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p---~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~ 230 (325)
T KOG4223|consen 162 IARDEERFKAADQDGDGSLTLEEFTAFLHPEEHP---HMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSHE 230 (325)
T ss_pred HHHHHHHHhhcccCCCCcccHHHHHhccChhhcc---hHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhcc
Confidence 4555788999999999999999999987654322 13444568889999999999999999999886643
No 78
>KOG4251 consensus Calcium binding protein [General function prediction only]
Probab=96.96 E-value=0.0013 Score=65.15 Aligned_cols=70 Identities=19% Similarity=0.265 Sum_probs=53.4
Q ss_pred cHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHH
Q 048038 308 NIDVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEK 378 (591)
Q Consensus 308 ~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~ 378 (591)
..++++.+|++.|.|.||+||..|+++++..---+ +-...-++-+..|+..|.|+||.|.|+||---+.+
T Consensus 99 srrklmviFsKvDVNtDrkisAkEmqrwImektaE-HfqeameeSkthFraVDpdgDGhvsWdEykvkFla 168 (362)
T KOG4251|consen 99 SRRKLMVIFSKVDVNTDRKISAKEMQRWIMEKTAE-HFQEAMEESKTHFRAVDPDGDGHVSWDEYKVKFLA 168 (362)
T ss_pred HHHHHHHHHhhcccCccccccHHHHHHHHHHHHHH-HHHHHHhhhhhheeeeCCCCCCceehhhhhhHHHh
Confidence 36789999999999999999999999987542110 00123455566788899999999999999765544
No 79
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=96.81 E-value=0.0045 Score=60.80 Aligned_cols=75 Identities=23% Similarity=0.344 Sum_probs=61.1
Q ss_pred cHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHH---HHHHHHHHHh
Q 048038 308 NIDVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFIN---GIEKWLNEAM 384 (591)
Q Consensus 308 ~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~---a~~~~~~~~k 384 (591)
.-..+...|.+.|+|+.|+|+.+||++++.....+ --..+-+.-++.-||.|++|+|++.||.+ .+.+|++-.+
T Consensus 55 ~~~~~~~~f~~vD~d~sg~i~~~eLq~aLsn~~~~---~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~i~~Wr~vF~ 131 (221)
T KOG0037|consen 55 TFPQLAGWFQSVDRDRSGRILAKELQQALSNGTWS---PFSIETCRLMISMFDRDNSGTIGFKEFKALWKYINQWRNVFR 131 (221)
T ss_pred ccHHHHHHHHhhCccccccccHHHHHHHhhcCCCC---CCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHHHHH
Confidence 45688899999999999999999999998754432 13456778888889999999999999987 4577887666
Q ss_pred h
Q 048038 385 Q 385 (591)
Q Consensus 385 ~ 385 (591)
+
T Consensus 132 ~ 132 (221)
T KOG0037|consen 132 T 132 (221)
T ss_pred h
Confidence 5
No 80
>PRK10599 calcium/sodium:proton antiporter; Provisional
Probab=96.70 E-value=0.012 Score=62.91 Aligned_cols=90 Identities=17% Similarity=0.190 Sum_probs=74.8
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHhC-CCccchhHHhhhcchhHHHHHHHhhcccchhhhhccceeehhhhhhHHH
Q 048038 89 LFLIIVYGYLMYVAATYLSNGSELLLEILG-PGVVGGLFLPILGALPDAMLILVSGLSGTKETAQSQVSVGMGLLAGSTV 167 (591)
Q Consensus 89 ~fli~v~g~ll~~~a~~l~~g~e~L~~~lg-p~iiG~~i~~~lgslPE~~i~l~s~l~~~~~~a~~~v~v~~G~l~GS~i 167 (591)
..++++.-......|++++..-|...+.+| |..+.|++.|+.+++||-+. +.++..++|.+..++..+||.+
T Consensus 224 ~~~L~v~lv~Vv~lAe~lv~sIe~~v~~~Glp~afiGvIIaiv~~apE~~t-------AV~aA~kNkmq~slnialGSsL 296 (366)
T PRK10599 224 AIWLIIHLIAVIAVTKMNASPLETLLTSMNAPVAFTGFLVALLILSPEGLG-------ALKAVLNNQVQRAMNLFFGSVL 296 (366)
T ss_pred HHHHHHHHHHHHHHHHHhHhhHHHHHHhcCCCHHHHHHHHHHHHcchhHHH-------HHHHHHcCchHHHHHHHHHHHH
Confidence 334434333447889999999999999999 77667788899999999999 7777788899999999999999
Q ss_pred HHHHHHHHHHhhhccccc
Q 048038 168 MLSTVIWGTCVVVGKCDL 185 (591)
Q Consensus 168 ~~ltli~G~~~l~g~~~~ 185 (591)
.-..+.....+++|-+--
T Consensus 297 q~illtvP~lvlig~~~g 314 (366)
T PRK10599 297 ATISLTVPVVTLIAFLTG 314 (366)
T ss_pred HHHHHHHHHHHHHHHHhC
Confidence 999999988888876543
No 81
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=96.17 E-value=0.01 Score=57.89 Aligned_cols=69 Identities=19% Similarity=0.352 Sum_probs=58.9
Q ss_pred CCcccHHHHHHHhhhhcCC-CCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCC-CChhHHHHHHHHHH
Q 048038 304 SGEPNIDVIKKLFDAIDEN-KDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSH-IDIKEFINGIEKWL 380 (591)
Q Consensus 304 ~~~~~~~~Lr~lF~~iD~n-~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~-Id~~EFl~a~~~~~ 380 (591)
.+..++..|.+.|+++|.+ ++|.++.+|+....... .+.-.+++++.||.+++|. |++.||++...-..
T Consensus 27 fs~~EI~~L~~rF~kl~~~~~~g~lt~eef~~i~~~~--------~Np~~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~ 97 (187)
T KOG0034|consen 27 FSANEIERLYERFKKLDRNNGDGYLTKEEFLSIPELA--------LNPLADRIIDRFDTDGNGDPVDFEEFVRLLSVFS 97 (187)
T ss_pred cCHHHHHHHHHHHHHhccccccCccCHHHHHHHHHHh--------cCcHHHHHHHHHhccCCCCccCHHHHHHHHhhhc
Confidence 4567899999999999999 99999999999887332 2346789999999999998 99999999886654
No 82
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=96.12 E-value=0.0034 Score=40.72 Aligned_cols=23 Identities=30% Similarity=0.611 Sum_probs=20.7
Q ss_pred HHHHHhhcCCCCCCCCChhHHHH
Q 048038 352 VSKVLSDFDTSNDSHIDIKEFIN 374 (591)
Q Consensus 352 v~~lm~~~D~d~dG~Id~~EFl~ 374 (591)
+++.|+.+|.|+||.|+++||.+
T Consensus 1 l~~~F~~~D~d~DG~is~~E~~~ 23 (25)
T PF13202_consen 1 LKDAFQQFDTDGDGKISFEEFQR 23 (25)
T ss_dssp HHHHHHHHTTTSSSEEEHHHHHH
T ss_pred CHHHHHHHcCCCCCcCCHHHHHH
Confidence 46789999999999999999976
No 83
>KOG1306 consensus Ca2+/Na+ exchanger NCX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=96.10 E-value=0.011 Score=64.17 Aligned_cols=73 Identities=12% Similarity=0.241 Sum_probs=55.4
Q ss_pred HHHHHHHHHhhHHHHHHhHHHHHHhcCCCchhhhhhhhhccccchhHHHHHHHHHhccc-cccccccchhhhhhhHHHHH
Q 048038 442 LLIGTIIAAAFADPLVDAVDNFSAATSIPSFFISFIALPFATNSSEAVSAIIFASRKKI-RTASLTFSELYGAVTMNNIL 520 (591)
Q Consensus 442 Ll~g~~~~~~~A~~lV~si~~~a~~~gIs~~~Is~iilPlats~~E~vsai~~A~k~k~-~~as~t~s~i~g~v~m~n~l 520 (591)
++++++.+.+.+-..-|-.+.+.=..|+.+.+.+++++++|||.|+..++-++|.++.- |.+ +|+|+..|.+
T Consensus 431 Fvvsi~~Igl~ta~igd~as~fgC~vglkdsVtA~~~vA~GTS~PDtfASkiAA~~d~~AD~~-------igNvTgSNaV 503 (596)
T KOG1306|consen 431 FVVSILFIGLLTAVIGDLASHFGCTVGLKDSVTAVTFVALGTSVPDTFASKIAAEQDQTADAS-------IGNVTGSNAV 503 (596)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhceeecCccceeeeeeehhcCCCcHHHHHHHHHhhccccccc-------ccceecccce
Confidence 44455555555556666667777789999999999999999999999999999999875 333 4666666664
Q ss_pred H
Q 048038 521 C 521 (591)
Q Consensus 521 ~ 521 (591)
+
T Consensus 504 N 504 (596)
T KOG1306|consen 504 N 504 (596)
T ss_pred e
Confidence 3
No 84
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=95.96 E-value=0.013 Score=53.94 Aligned_cols=69 Identities=25% Similarity=0.333 Sum_probs=55.5
Q ss_pred ccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHH----HHHHhhcCCCCCCCCChhHHHHHHHH
Q 048038 307 PNIDVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAV----SKVLSDFDTSNDSHIDIKEFINGIEK 378 (591)
Q Consensus 307 ~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev----~~lm~~~D~d~dG~Id~~EFl~a~~~ 378 (591)
|..-+.+-.|+-.|-|+|+.|-.++|...+..+-.+. .+++|+ ++++++-|.||||++++.||..-+.+
T Consensus 105 PrdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr~e---Ls~eEv~~i~ekvieEAD~DgDgkl~~~eFe~~i~r 177 (189)
T KOG0038|consen 105 PRDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSLTRDE---LSDEEVELICEKVIEEADLDGDGKLSFAEFEHVILR 177 (189)
T ss_pred hHHhhhhheeEEeecCCCCcccHHHHHHHHHHHhhcc---CCHHHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Confidence 3445566788999999999999999999888775432 455554 67788899999999999999887765
No 85
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=95.79 E-value=0.016 Score=44.19 Aligned_cols=48 Identities=21% Similarity=0.336 Sum_probs=37.3
Q ss_pred CcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHH
Q 048038 326 RLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIE 377 (591)
Q Consensus 326 ~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~ 377 (591)
+++.+|++..++.++.+ ..++-+.++|+..|.+++|.++-+||..-..
T Consensus 1 kmsf~Evk~lLk~~NI~----~~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~ 48 (51)
T PF14788_consen 1 KMSFKEVKKLLKMMNIE----MDDEYARQLFQECDKSQSGRLEGEEFEEFYK 48 (51)
T ss_dssp EBEHHHHHHHHHHTT--------HHHHHHHHHHH-SSSSSEBEHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHccC----cCHHHHHHHHHHhcccCCCCccHHHHHHHHH
Confidence 36788999999998876 6778899999999999999999999987543
No 86
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=95.59 E-value=0.01 Score=40.21 Aligned_cols=28 Identities=25% Similarity=0.415 Sum_probs=24.0
Q ss_pred HHHHHHhhcCCCCCCCCChhHHHHHHHH
Q 048038 351 AVSKVLSDFDTSNDSHIDIKEFINGIEK 378 (591)
Q Consensus 351 ev~~lm~~~D~d~dG~Id~~EFl~a~~~ 378 (591)
++.++|+.+|.|+||+|+.+||...+.+
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~~ 28 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILRK 28 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 4678999999999999999999988763
No 87
>KOG2399 consensus K+-dependent Na+:Ca2+ antiporter [Inorganic ion transport and metabolism]
Probab=95.22 E-value=0.043 Score=62.32 Aligned_cols=123 Identities=14% Similarity=0.267 Sum_probs=91.5
Q ss_pred HhhHHHHHHhHHHHHHhcCCCchhhhhhhhhccccchhHHHHHHHHHhccccccccccchhhhhhhHHHHHHHHHH----
Q 048038 450 AAFADPLVDAVDNFSAATSIPSFFISFIALPFATNSSEAVSAIIFASRKKIRTASLTFSELYGAVTMNNILCLSVF---- 525 (591)
Q Consensus 450 ~~~A~~lV~si~~~a~~~gIs~~~Is~iilPlats~~E~vsai~~A~k~k~~~as~t~s~i~g~v~m~n~l~l~vf---- 525 (591)
..-.+++-.++..+++.+.+||...|++++|+|..+|+..+++..-+..+.. .+..|+.++-++|
T Consensus 120 ~~a~~yFspsL~~is~~L~l~esvAGVTlLa~GNgapDvf~siasv~~~~~~-----------~~~~~~~lg~alFVt~~ 188 (605)
T KOG2399|consen 120 ITADDYFSPSLSSISSLLRLSESVAGVTLLAFGNGAPDVFASIASVRGTPKG-----------DLALNDLLGGALFVTTV 188 (605)
T ss_pred HHHHHhcChHHHHHHHHhcCCCceeeEEEeeecCCCchHHhhhheeecCCCc-----------ccHHHHHhccceeEEee
Confidence 3446778889999999999999999999999999999999988854443322 2447777776654
Q ss_pred -HHHH-HhcCcccccch---hHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHH
Q 048038 526 -LALV-YARGLTWDFSS---EVLVILIVCLVMGAFASFRTNFPLWTCSIAYALYPFSLALVYV 583 (591)
Q Consensus 526 -l~lv-~~r~l~w~fs~---evlvil~v~~~~~~~~~~r~~~~~~~~~~~~~lY~~sl~lv~~ 583 (591)
+|++ +.+|++-+-.. |.+-.++....+.++...-.+.+.|.++..+..|++|...|.+
T Consensus 189 V~G~i~~t~pFki~~~~~iRDi~Fll~al~~l~~~~~~~~~v~~~~~l~fl~~y~~Yv~~vi~ 251 (605)
T KOG2399|consen 189 VVGLIILTKPFKINANSFIRDILFLLLALLFLAFILLRGNKVEIWMALTFLGIYVVYVVTVIV 251 (605)
T ss_pred EeeeeeeecceeeccchhHHHHHHHHHHHHHHHHHHhcCCceeHHhHHHHhHHHHHHHHHHHH
Confidence 5554 66774433222 6666666665666655444489999999999999999988875
No 88
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=95.07 E-value=0.023 Score=35.92 Aligned_cols=26 Identities=27% Similarity=0.520 Sum_probs=18.3
Q ss_pred HHHHhhhhcCCCCCCcCHHHHHHHHH
Q 048038 312 IKKLFDAIDENKDERLSASELKALII 337 (591)
Q Consensus 312 Lr~lF~~iD~n~DG~Is~~ELk~~l~ 337 (591)
++++|+.+|.|++|.++.+|++.+++
T Consensus 2 ~~~~f~~~d~~~~g~i~~~e~~~~~~ 27 (29)
T smart00054 2 LKEAFRLFDKDGDGKIDFEEFKDLLK 27 (29)
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHHH
Confidence 45677777777777777777776654
No 89
>KOG1306 consensus Ca2+/Na+ exchanger NCX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=94.61 E-value=0.024 Score=61.71 Aligned_cols=103 Identities=15% Similarity=0.193 Sum_probs=75.7
Q ss_pred ccCccccccccchhHHHHHHHHHHH-HHHHhHHHHHHHHHHHHhC--CCccchhHHhhhcchhHHHHHHHhhcccchhhh
Q 048038 75 TYGFLPCTTTVLGNLFLIIVYGYLM-YVAATYLSNGSELLLEILG--PGVVGGLFLPILGALPDAMLILVSGLSGTKETA 151 (591)
Q Consensus 75 ~yg~~pc~~~~~g~~fli~v~g~ll-~~~a~~l~~g~e~L~~~lg--p~iiG~~i~~~lgslPE~~i~l~s~l~~~~~~a 151 (591)
.+-|+|=++--.|..- |+.++++ ......+.|-+..+.-..| +.+..-+++|++||+||.+-+-+++. .
T Consensus 415 lFAfvPPt~~~~Gw~c--Fvvsi~~Igl~ta~igd~as~fgC~vglkdsVtA~~~vA~GTS~PDtfASkiAA~------~ 486 (596)
T KOG1306|consen 415 LFAFVPPTEICHGWAC--FVVSILFIGLLTAVIGDLASHFGCTVGLKDSVTAVTFVALGTSVPDTFASKIAAE------Q 486 (596)
T ss_pred HeeeCCchhhcCccHH--HHHHHHHHHHHHHHHHHHHHhhceeecCccceeeeeeehhcCCCcHHHHHHHHHh------h
Confidence 4678888888888753 4556665 5666677777776666666 56888899999999999998554443 4
Q ss_pred hccceeehhhhhhHHHHHHHHHHHHHhhhccccc
Q 048038 152 QSQVSVGMGLLAGSTVMLSTVIWGTCVVVGKCDL 185 (591)
Q Consensus 152 ~~~v~v~~G~l~GS~i~~ltli~G~~~l~g~~~~ 185 (591)
+...+-.+||+.|||-.|..+-+|+.-.+..+..
T Consensus 487 d~~AD~~igNvTgSNaVNvflGiG~aW~iaavy~ 520 (596)
T KOG1306|consen 487 DQTADASIGNVTGSNAVNVFLGIGLAWSIAAVYW 520 (596)
T ss_pred cccccccccceecccceeEEEeccHHHHHHHHHH
Confidence 4556889999999999997777666655555544
No 90
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]
Probab=94.45 E-value=0.32 Score=51.86 Aligned_cols=79 Identities=20% Similarity=0.384 Sum_probs=66.7
Q ss_pred HHHH-HHHHhHHHHHHHHHHHHhC--CCccchhHHhhhcchhHHHHHHHhhcccchhhhhccceeehhhhhhHHHHHHHH
Q 048038 96 GYLM-YVAATYLSNGSELLLEILG--PGVVGGLFLPILGALPDAMLILVSGLSGTKETAQSQVSVGMGLLAGSTVMLSTV 172 (591)
Q Consensus 96 g~ll-~~~a~~l~~g~e~L~~~lg--p~iiG~~i~~~lgslPE~~i~l~s~l~~~~~~a~~~v~v~~G~l~GS~i~~ltl 172 (591)
+-++ ...|++++..-|...+.+| |-.+|-++.++-|+.||.+- +.++..+++.+.+++...||.+--..+
T Consensus 229 ~tv~v~~lae~lv~~le~~l~~~g~~~~F~G~iIa~lVgn~~E~~t-------Ai~aA~~~~mqls~nia~Gsalq~~ll 301 (368)
T COG0387 229 ATVLVALLAEILVGSLEAVLESLGAPPAFVGLIIAALVGNAPEHLT-------ALRAALNNRMQLSMNIAMGSALQTALL 301 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhccCHHHHH-------HHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 4444 8899999999999999999 46999999999999999999 667777888889999999999888777
Q ss_pred HHHHHhhhc
Q 048038 173 IWGTCVVVG 181 (591)
Q Consensus 173 i~G~~~l~g 181 (591)
..-.-++++
T Consensus 302 tiP~lvlis 310 (368)
T COG0387 302 TIPVLVLIS 310 (368)
T ss_pred HHHHHHHHH
Confidence 665555443
No 91
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=93.88 E-value=0.055 Score=34.08 Aligned_cols=28 Identities=25% Similarity=0.479 Sum_probs=24.0
Q ss_pred HHHHHHhhcCCCCCCCCChhHHHHHHHH
Q 048038 351 AVSKVLSDFDTSNDSHIDIKEFINGIEK 378 (591)
Q Consensus 351 ev~~lm~~~D~d~dG~Id~~EFl~a~~~ 378 (591)
|++++++.+|.|++|.|+++||...+.+
T Consensus 1 ~~~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 1 ELKEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred CHHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 3678899999999999999999887653
No 92
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=93.55 E-value=0.084 Score=40.16 Aligned_cols=31 Identities=19% Similarity=0.364 Sum_probs=27.7
Q ss_pred ccHHHHHHHhhhhcCCCCCCcCHHHHHHHHH
Q 048038 307 PNIDVIKKLFDAIDENKDERLSASELKALII 337 (591)
Q Consensus 307 ~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~ 337 (591)
...+.++.+|+.+|.|+||.|+.+|+...++
T Consensus 22 ~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~ 52 (54)
T PF13833_consen 22 LSEEEVDRLFREFDTDGDGYISFDEFISMMQ 52 (54)
T ss_dssp SCHHHHHHHHHHHTTSSSSSEEHHHHHHHHH
T ss_pred CCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Confidence 4566799999999999999999999998775
No 93
>KOG3555 consensus Ca2+-binding proteoglycan Testican [General function prediction only]
Probab=93.33 E-value=0.099 Score=54.60 Aligned_cols=65 Identities=23% Similarity=0.310 Sum_probs=55.6
Q ss_pred CCcccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHH
Q 048038 304 SGEPNIDVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGI 376 (591)
Q Consensus 304 ~~~~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~ 376 (591)
..+.-+..+.=+|+++|.|.||.|+.+||++.... .-+..++.+|+..|...||.|+-.|+.--+
T Consensus 244 ~~p~CKds~gWMFnklD~N~Dl~Ld~sEl~~I~ld--------knE~CikpFfnsCD~~kDg~iS~~EWC~CF 308 (434)
T KOG3555|consen 244 ILPICKDSLGWMFNKLDTNYDLLLDQSELRAIELD--------KNEACIKPFFNSCDTYKDGSISTNEWCYCF 308 (434)
T ss_pred cCcchhhhhhhhhhccccccccccCHHHhhhhhcc--------CchhHHHHHHhhhcccccCccccchhhhhh
Confidence 34567889999999999999999999999986543 235679999999999999999999987754
No 94
>KOG3866 consensus DNA-binding protein of the nucleobindin family [General function prediction only]
Probab=92.87 E-value=0.12 Score=53.16 Aligned_cols=66 Identities=26% Similarity=0.391 Sum_probs=47.1
Q ss_pred HHHHhhhhcCCCCCCcCHHHHHHHHHc----cccccccc-----cchHH----HHHHHhhcCCCCCCCCChhHHHHHHHH
Q 048038 312 IKKLFDAIDENKDERLSASELKALIIG----IRFEEIDL-----DQDDA----VSKVLSDFDTSNDSHIDIKEFINGIEK 378 (591)
Q Consensus 312 Lr~lF~~iD~n~DG~Is~~ELk~~l~~----~~~~~~~~-----~~~~e----v~~lm~~~D~d~dG~Id~~EFl~a~~~ 378 (591)
-+..|.-.|.|+||.++..||.+++.+ +... .+. ..++| -+.+|++.|+|.|..|+.+||++.+-+
T Consensus 246 PKTFF~LHD~NsDGfldeqELEaLFtkELEKvYdp-kNeeDDM~EmeEErlRMREHVMk~vDtNqDRlvtleEFL~~t~~ 324 (442)
T KOG3866|consen 246 PKTFFALHDLNSDGFLDEQELEALFTKELEKVYDP-KNEEDDMKEMEEERLRMREHVMKQVDTNQDRLVTLEEFLNDTDN 324 (442)
T ss_pred cchheeeeccCCcccccHHHHHHHHHHHHHHhcCC-CCcchHHHHHHHHHHHHHHHHHHhcccchhhhhhHHHHHhhhhh
Confidence 345566678899999999999987643 2111 111 11122 267899999999999999999998744
No 95
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=91.88 E-value=0.17 Score=39.91 Aligned_cols=28 Identities=25% Similarity=0.503 Sum_probs=24.3
Q ss_pred HHHHHHHhhhhcCCCCCCcCHHHHHHHH
Q 048038 309 IDVIKKLFDAIDENKDERLSASELKALI 336 (591)
Q Consensus 309 ~~~Lr~lF~~iD~n~DG~Is~~ELk~~l 336 (591)
.+.++.+|+.+|+|+||.|+.+|+..++
T Consensus 39 ~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 39 DEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 4567888999999999999999998753
No 96
>KOG1397 consensus Ca2+/H+ antiporter VCX1 and related proteins [Inorganic ion transport and metabolism]
Probab=90.64 E-value=0.44 Score=50.93 Aligned_cols=87 Identities=18% Similarity=0.366 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHhC--CCccchhHHhhhcchhHHHHHHHhhcccchhhhhccceeehhhhhhHH
Q 048038 89 LFLIIVYGYLMYVAATYLSNGSELLLEILG--PGVVGGLFLPILGALPDAMLILVSGLSGTKETAQSQVSVGMGLLAGST 166 (591)
Q Consensus 89 ~fli~v~g~ll~~~a~~l~~g~e~L~~~lg--p~iiG~~i~~~lgslPE~~i~l~s~l~~~~~~a~~~v~v~~G~l~GS~ 166 (591)
++.+....++.-..|+|+++..|...+..| +..+|-+++|+-||+-|-+- +..=..+++.++.+|..+||.
T Consensus 292 ~~~L~~~T~~vsllaeyLV~~Id~~~ds~~ls~~FiglillpiVgNaaEh~~-------AI~fA~k~kldLslgVaigsa 364 (441)
T KOG1397|consen 292 IIWLLIMTLLVSLLAEYLVDTIDDVSDSWGLSVKFIGLILLPIVGNAAEHAG-------AISFAMKDKLDLSLGVAIGSA 364 (441)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhheeeeecccCchHHhhc-------ceeeeecCcccchhhhhhhhh
Confidence 444445555558899999999999999988 68999999999999999987 444556789999999999999
Q ss_pred HHHHHHHHHHHhhhcc
Q 048038 167 VMLSTVIWGTCVVVGK 182 (591)
Q Consensus 167 i~~ltli~G~~~l~g~ 182 (591)
+=-.+++...|+++|=
T Consensus 365 lQI~Lf~vP~~v~v~W 380 (441)
T KOG1397|consen 365 LQIALFVVPFSVIVGW 380 (441)
T ss_pred HhHHHhhhhHHHHhhh
Confidence 9998888889998764
No 97
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=88.41 E-value=0.61 Score=40.07 Aligned_cols=34 Identities=21% Similarity=0.451 Sum_probs=29.6
Q ss_pred ccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccc
Q 048038 307 PNIDVIKKLFDAIDENKDERLSASELKALIIGIR 340 (591)
Q Consensus 307 ~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~ 340 (591)
+....+.++++.+|.|+||.|+.+|+...+..+-
T Consensus 50 ~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l~ 83 (93)
T cd05026 50 KDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAALT 83 (93)
T ss_pred cCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH
Confidence 3567899999999999999999999999877653
No 98
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=87.94 E-value=1.6 Score=37.52 Aligned_cols=35 Identities=17% Similarity=0.393 Sum_probs=30.7
Q ss_pred cccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccc
Q 048038 306 EPNIDVIKKLFDAIDENKDERLSASELKALIIGIR 340 (591)
Q Consensus 306 ~~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~ 340 (591)
+.+.+.+.++|+.+|.|+||.++.+|+-.++.++.
T Consensus 44 ~~d~~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~l~ 78 (91)
T cd05024 44 QNDPMAVDKIMKDLDDCRDGKVGFQSFFSLIAGLL 78 (91)
T ss_pred CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence 45788999999999999999999999998876653
No 99
>KOG1955 consensus Ral-GTPase effector RALBP1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=87.85 E-value=0.82 Score=49.99 Aligned_cols=70 Identities=13% Similarity=0.191 Sum_probs=61.2
Q ss_pred CcccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHHHH
Q 048038 305 GEPNIDVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEKWL 380 (591)
Q Consensus 305 ~~~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~~~ 380 (591)
++++.+..-+.|+.+..|-+|.|+-+--|..+.+-+. .-+|+..|++-.|.|+||-++.+||++++.--.
T Consensus 226 T~EQReYYvnQFrtvQpDp~gfisGsaAknFFtKSkl------pi~ELshIWeLsD~d~DGALtL~EFcAAfHLVV 295 (737)
T KOG1955|consen 226 TPEQREYYVNQFRTVQPDPHGFISGSAAKNFFTKSKL------PIEELSHIWELSDVDRDGALTLSEFCAAFHLVV 295 (737)
T ss_pred CHHHHHHHHhhhhcccCCcccccccHHHHhhhhhccC------chHHHHHHHhhcccCccccccHHHHHhhHhhee
Confidence 5677888999999999999999999988888877654 357999999999999999999999999985543
No 100
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=87.61 E-value=0.64 Score=35.56 Aligned_cols=34 Identities=21% Similarity=0.330 Sum_probs=26.0
Q ss_pred CcccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHc
Q 048038 305 GEPNIDVIKKLFDAIDENKDERLSASELKALIIG 338 (591)
Q Consensus 305 ~~~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~ 338 (591)
-+-+....+.+|++.|++++|.|..+|+...++.
T Consensus 16 I~~~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~~ 49 (51)
T PF14788_consen 16 IEMDDEYARQLFQECDKSQSGRLEGEEFEEFYKR 49 (51)
T ss_dssp ----HHHHHHHHHHH-SSSSSEBEHHHHHHHHHH
T ss_pred cCcCHHHHHHHHHHhcccCCCCccHHHHHHHHHH
Confidence 3456778899999999999999999999887654
No 101
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=87.48 E-value=1.3 Score=47.96 Aligned_cols=75 Identities=17% Similarity=0.264 Sum_probs=52.6
Q ss_pred HHHHHHHhhhhcCCCCCCcCHHHHHHHHH---ccccc-------------ccc---------c----c------------
Q 048038 309 IDVIKKLFDAIDENKDERLSASELKALII---GIRFE-------------EID---------L----D------------ 347 (591)
Q Consensus 309 ~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~---~~~~~-------------~~~---------~----~------------ 347 (591)
...|.+.|++.|.++.|+|+.+....++. +++.+ +.. . +
T Consensus 463 ~sdL~~eF~~~D~~ksG~lsis~Wa~~mE~i~~L~LPWr~L~~kla~~s~d~~v~Y~~~~~~l~~e~~~~ea~~slvetL 542 (631)
T KOG0377|consen 463 RSDLEDEFRKYDPKKSGKLSISHWAKCMENITGLNLPWRLLRPKLANGSDDGKVEYKSTLDNLDTEVILEEAGSSLVETL 542 (631)
T ss_pred hhHHHHHHHhcChhhcCeeeHHHHHHHHHHHhcCCCcHHHhhhhccCCCcCcceehHhHHHHhhhhhHHHHHHhHHHHHH
Confidence 56788999999999999999988776542 11110 000 0 0
Q ss_pred --chHHHHHHHhhcCCCCCCCCChhHHHHHHHHHHHHH
Q 048038 348 --QDDAVSKVLSDFDTSNDSHIDIKEFINGIEKWLNEA 383 (591)
Q Consensus 348 --~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~~~~~~ 383 (591)
....++.+|+.+|.|++|.|+.+||..++.-.-...
T Consensus 543 Yr~ks~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~ 580 (631)
T KOG0377|consen 543 YRNKSSLETIFNIIDADNSGEISLDEFRTAWKLLSSHM 580 (631)
T ss_pred HhchhhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhc
Confidence 023457789999999999999999999875544333
No 102
>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]
Probab=86.67 E-value=0.77 Score=49.69 Aligned_cols=74 Identities=16% Similarity=0.181 Sum_probs=47.8
Q ss_pred HHHHHHHhhhhcCCCCCCcCHHHHHHHHHc------ccccccccc-----chHHHHHHHh--hcCCCCCCCCChhHHHHH
Q 048038 309 IDVIKKLFDAIDENKDERLSASELKALIIG------IRFEEIDLD-----QDDAVSKVLS--DFDTSNDSHIDIKEFING 375 (591)
Q Consensus 309 ~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~------~~~~~~~~~-----~~~ev~~lm~--~~D~d~dG~Id~~EFl~a 375 (591)
....+-.|+.+|.|+||.|+.+|+....+- ++..+.|-. ..-+++.-+. =|-.+++++++++||..-
T Consensus 232 ~~~F~IAFKMFD~dgnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~s~~~~~nsaL~~yFFG~rg~~kLs~deF~~F 311 (489)
T KOG2643|consen 232 ERNFRIAFKMFDLDGNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGNSFKVEVNSALLTYFFGKRGNGKLSIDEFLKF 311 (489)
T ss_pred cccceeeeeeeecCCCCcccHHHHHHHHHHHHhccccceecccCccccceehhhhhhhHHHHhhccCCCccccHHHHHHH
Confidence 345667899999999999999999865321 122111111 1223332222 368899999999999987
Q ss_pred HHHHHHH
Q 048038 376 IEKWLNE 382 (591)
Q Consensus 376 ~~~~~~~ 382 (591)
..+.+.+
T Consensus 312 ~e~Lq~E 318 (489)
T KOG2643|consen 312 QENLQEE 318 (489)
T ss_pred HHHHHHH
Confidence 7665543
No 103
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=86.44 E-value=0.74 Score=38.37 Aligned_cols=63 Identities=14% Similarity=0.320 Sum_probs=49.7
Q ss_pred HHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCC----CCCCCChhHHHHHH
Q 048038 311 VIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTS----NDSHIDIKEFINGI 376 (591)
Q Consensus 311 ~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d----~dG~Id~~EFl~a~ 376 (591)
.++.+|+++-. +.+.+|.++++..|...+.+.. ..+++++++++.+..+ ..+.++.++|..-+
T Consensus 1 ei~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~--~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL 67 (83)
T PF09279_consen 1 EIEEIFRKYSS-DKEYMTAEEFRRFLREEQGEPR--LTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFL 67 (83)
T ss_dssp HHHHHHHHHCT-TSSSEEHHHHHHHHHHTSS-TT--SSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHH
T ss_pred CHHHHHHHHhC-CCCcCCHHHHHHHHHHHhcccc--CcHHHHHHHHHHHccchhhcccCCcCHHHHHHHH
Confidence 36789999955 8999999999999987765311 3689999999998655 47889999887544
No 104
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=86.14 E-value=0.86 Score=41.05 Aligned_cols=29 Identities=31% Similarity=0.377 Sum_probs=25.7
Q ss_pred HHHHHHHhhhhcCCCCCCcCHHHHHHHHH
Q 048038 309 IDVIKKLFDAIDENKDERLSASELKALII 337 (591)
Q Consensus 309 ~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~ 337 (591)
....++.|+.+|.|+||.||.+|+..++.
T Consensus 79 e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl~ 107 (116)
T cd00252 79 EHCIKPFFESCDLDKDGSISLDEWCYCFI 107 (116)
T ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHh
Confidence 45567899999999999999999999984
No 105
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=86.03 E-value=1.1 Score=51.61 Aligned_cols=67 Identities=18% Similarity=0.315 Sum_probs=57.2
Q ss_pred CcccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHH
Q 048038 305 GEPNIDVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIE 377 (591)
Q Consensus 305 ~~~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~ 377 (591)
.+.+..+.+.+|+.+|+...|++|-..-+.+|..-+. ....+..|+.--|.|+||+++-+||+-++.
T Consensus 190 p~~~klKY~QlFNa~DktrsG~Lsg~qaR~aL~qS~L------pq~~LA~IW~LsDvd~DGkL~~dEfilam~ 256 (1118)
T KOG1029|consen 190 PQHNKLKYRQLFNALDKTRSGYLSGQQARSALGQSGL------PQNQLAHIWTLSDVDGDGKLSADEFILAMH 256 (1118)
T ss_pred cchhhhHHHHHhhhcccccccccccHHHHHHHHhcCC------chhhHhhheeeeccCCCCcccHHHHHHHHH
Confidence 3456788899999999999999999998888776654 356778889999999999999999998874
No 106
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=85.41 E-value=0.96 Score=38.74 Aligned_cols=30 Identities=27% Similarity=0.385 Sum_probs=27.2
Q ss_pred HHHHHHhhhhcCCCCCCcCHHHHHHHHHcc
Q 048038 310 DVIKKLFDAIDENKDERLSASELKALIIGI 339 (591)
Q Consensus 310 ~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~ 339 (591)
+.++++++.+|.|+||.|+.+|+...+.++
T Consensus 47 ~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l 76 (89)
T cd05022 47 EGLEEKMKNLDVNQDSKLSFEEFWELIGEL 76 (89)
T ss_pred HHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 679999999999999999999999887655
No 107
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=85.14 E-value=1.2 Score=38.14 Aligned_cols=33 Identities=27% Similarity=0.461 Sum_probs=28.6
Q ss_pred ccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHcc
Q 048038 307 PNIDVIKKLFDAIDENKDERLSASELKALIIGI 339 (591)
Q Consensus 307 ~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~ 339 (591)
.+...+.++++.+|.|+||.|+.+|+..++..+
T Consensus 49 ~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l 81 (89)
T cd05023 49 KDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGL 81 (89)
T ss_pred CCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence 456778889999999999999999999887655
No 108
>KOG4251 consensus Calcium binding protein [General function prediction only]
Probab=84.68 E-value=1.6 Score=43.79 Aligned_cols=63 Identities=24% Similarity=0.350 Sum_probs=50.4
Q ss_pred HHHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHH
Q 048038 309 IDVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFING 375 (591)
Q Consensus 309 ~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a 375 (591)
+++.|+.=+.||.|+||..|.+||.......++. ..-.++.++|..-|.|+|.+++.+|-++.
T Consensus 280 kdRkkEFeElIDsNhDGivTaeELe~y~dP~n~~----~alne~~~~ma~~d~n~~~~Ls~eell~r 342 (362)
T KOG4251|consen 280 KDRKKEFEELIDSNHDGIVTAEELEDYVDPQNFR----LALNEVNDIMALTDANNDEKLSLEELLER 342 (362)
T ss_pred HHHHHHHHHHhhcCCccceeHHHHHhhcCchhhh----hhHHHHHHHHhhhccCCCcccCHHHHHHH
Confidence 3444444466999999999999999886655543 45678999999999999999999997764
No 109
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=82.57 E-value=1.7 Score=36.98 Aligned_cols=34 Identities=24% Similarity=0.345 Sum_probs=28.8
Q ss_pred ccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccc
Q 048038 307 PNIDVIKKLFDAIDENKDERLSASELKALIIGIR 340 (591)
Q Consensus 307 ~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~ 340 (591)
...+.+.++|+.+|.|+||+|+.+|+...+.++.
T Consensus 48 ~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l~ 81 (88)
T cd05029 48 LQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGALA 81 (88)
T ss_pred CCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHH
Confidence 3567888899999999999999999988776653
No 110
>KOG2243 consensus Ca2+ release channel (ryanodine receptor) [Signal transduction mechanisms]
Probab=81.42 E-value=2.1 Score=51.72 Aligned_cols=58 Identities=14% Similarity=0.317 Sum_probs=50.4
Q ss_pred hhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHH
Q 048038 316 FDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEK 378 (591)
Q Consensus 316 F~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~ 378 (591)
|++.|+|+.|.|++.|+..++.+... ....|++-+++--..|.+...||.||+.....
T Consensus 4063 fkeydpdgkgiiskkdf~kame~~k~-----ytqse~dfllscae~dend~~~y~dfv~rfhe 4120 (5019)
T KOG2243|consen 4063 FKEYDPDGKGIISKKDFHKAMEGHKH-----YTQSEIDFLLSCAEADENDMFDYEDFVDRFHE 4120 (5019)
T ss_pred chhcCCCCCccccHHHHHHHHhcccc-----chhHHHHHHHHhhccCccccccHHHHHHHhcC
Confidence 56789999999999999999887543 56789999999999999999999999986643
No 111
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=81.08 E-value=2.1 Score=36.30 Aligned_cols=33 Identities=36% Similarity=0.614 Sum_probs=28.6
Q ss_pred ccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHcc
Q 048038 307 PNIDVIKKLFDAIDENKDERLSASELKALIIGI 339 (591)
Q Consensus 307 ~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~ 339 (591)
...+.+.++|+.+|.|+||.|+.+|+...+..+
T Consensus 48 ~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~~ 80 (88)
T cd05030 48 KNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIKV 80 (88)
T ss_pred CCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence 346789999999999999999999999877654
No 112
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=80.46 E-value=2.2 Score=36.31 Aligned_cols=34 Identities=24% Similarity=0.481 Sum_probs=29.2
Q ss_pred ccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccc
Q 048038 307 PNIDVIKKLFDAIDENKDERLSASELKALIIGIR 340 (591)
Q Consensus 307 ~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~ 340 (591)
+..+.++++|+.+|.|+||.|+.+|+...+..+.
T Consensus 49 ~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~~ 82 (92)
T cd05025 49 KDADAVDKIMKELDENGDGEVDFQEFVVLVAALT 82 (92)
T ss_pred CCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHH
Confidence 4567899999999999999999999998876543
No 113
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=80.42 E-value=2.3 Score=36.24 Aligned_cols=34 Identities=18% Similarity=0.377 Sum_probs=29.3
Q ss_pred ccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccc
Q 048038 307 PNIDVIKKLFDAIDENKDERLSASELKALIIGIR 340 (591)
Q Consensus 307 ~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~ 340 (591)
.+.+.+.++++.+|.|+||+++.+|+..++..+.
T Consensus 48 ~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~~~ 81 (88)
T cd05027 48 KEQEVVDKVMETLDSDGDGECDFQEFMAFVAMVT 81 (88)
T ss_pred CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence 4567799999999999999999999998876653
No 114
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=80.10 E-value=2.2 Score=31.59 Aligned_cols=31 Identities=16% Similarity=0.356 Sum_probs=26.2
Q ss_pred cccHHHHHHHhhhhcCCCCCCcCHHHHHHHH
Q 048038 306 EPNIDVIKKLFDAIDENKDERLSASELKALI 336 (591)
Q Consensus 306 ~~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l 336 (591)
+...+.++.+|+.+|.|++|.|+.+|+...+
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 32 GLSEEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred CCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 3456778889999999999999999987654
No 115
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=79.38 E-value=2.3 Score=36.35 Aligned_cols=34 Identities=21% Similarity=0.516 Sum_probs=29.6
Q ss_pred cHHHHHHHhhhhcCCCCCCcCHHHHHHHHHcccc
Q 048038 308 NIDVIKKLFDAIDENKDERLSASELKALIIGIRF 341 (591)
Q Consensus 308 ~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~ 341 (591)
..+.++++|+.+|.|+||.|+.+|+.+++...+.
T Consensus 49 s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~~~ 82 (94)
T cd05031 49 DPMAVDKIMKDLDQNRDGKVNFEEFVSLVAGLSI 82 (94)
T ss_pred cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHH
Confidence 4568899999999999999999999988876653
No 116
>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]
Probab=79.26 E-value=1.2 Score=48.36 Aligned_cols=73 Identities=21% Similarity=0.389 Sum_probs=46.9
Q ss_pred HHHHHHHhhhhcCCCCCCcCHHHHHHHH---Hccc-------c-cccc-ccch-----------------HHHHHHHhhc
Q 048038 309 IDVIKKLFDAIDENKDERLSASELKALI---IGIR-------F-EEID-LDQD-----------------DAVSKVLSDF 359 (591)
Q Consensus 309 ~~~Lr~lF~~iD~n~DG~Is~~ELk~~l---~~~~-------~-~~~~-~~~~-----------------~ev~~lm~~~ 359 (591)
...++++=++++.+ +-.||.+|+++.. ..++ + ...+ .... .-++-++..|
T Consensus 356 ~~~lkrvk~kf~~~-~~gISl~Ef~~Ff~Fl~~l~dfd~Al~fy~~Ag~~i~~~~f~raa~~vtGveLSdhVvdvvF~IF 434 (489)
T KOG2643|consen 356 HKYLKRVKEKFKDD-GKGISLQEFKAFFRFLNNLNDFDIALRFYHMAGASIDEKTFQRAAKVVTGVELSDHVVDVVFTIF 434 (489)
T ss_pred HHHHHHHHHhccCC-CCCcCHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCHHHHHHHHHHhcCcccccceeeeEEEEE
Confidence 33667777777777 6678888888532 1110 0 0000 1122 2334456679
Q ss_pred CCCCCCCCChhHHHHHHHHHHHH
Q 048038 360 DTSNDSHIDIKEFINGIEKWLNE 382 (591)
Q Consensus 360 D~d~dG~Id~~EFl~a~~~~~~~ 382 (591)
|.|+||.+++.||++-+.+|+.+
T Consensus 435 D~N~Dg~LS~~EFl~Vmk~Rmhr 457 (489)
T KOG2643|consen 435 DENNDGTLSHKEFLAVMKRRMHR 457 (489)
T ss_pred ccCCCCcccHHHHHHHHHHHhhc
Confidence 99999999999999999998844
No 117
>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]
Probab=77.94 E-value=4 Score=44.69 Aligned_cols=65 Identities=22% Similarity=0.251 Sum_probs=44.4
Q ss_pred HHHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhh----cCCCCCCCCChhHHHHHHHHHH
Q 048038 309 IDVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSD----FDTSNDSHIDIKEFINGIEKWL 380 (591)
Q Consensus 309 ~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~----~D~d~dG~Id~~EFl~a~~~~~ 380 (591)
-..+-..|-.+|+|+||.|++++|+..=.+. ..+--++++|++ +=.-.+|++||.+|+--+.--.
T Consensus 277 f~viy~kFweLD~Dhd~lidk~~L~ry~d~t-------lt~~ivdRIFs~v~r~~~~~~eGrmdykdFv~FilA~e 345 (493)
T KOG2562|consen 277 FYVIYCKFWELDTDHDGLIDKEDLKRYGDHT-------LTERIVDRIFSQVPRGFTVKVEGRMDYKDFVDFILAEE 345 (493)
T ss_pred HHHHHHHHhhhccccccccCHHHHHHHhccc-------hhhHHHHHHHhhccccceeeecCcccHHHHHHHHHHhc
Confidence 3344455889999999999999998642222 235567888873 3344588888888876655433
No 118
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=77.43 E-value=3.4 Score=32.16 Aligned_cols=31 Identities=23% Similarity=0.363 Sum_probs=26.7
Q ss_pred cHHHHHHHhhhhcCCCCCCcCHHHHHHHHHc
Q 048038 308 NIDVIKKLFDAIDENKDERLSASELKALIIG 338 (591)
Q Consensus 308 ~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~ 338 (591)
..+.++++|+.+|.|+||.|+.+|+..++..
T Consensus 31 ~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~ 61 (67)
T cd00052 31 PRSVLAQIWDLADTDKDGKLDKEEFAIAMHL 61 (67)
T ss_pred CHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 4556899999999999999999999887654
No 119
>KOG0035 consensus Ca2+-binding actin-bundling protein (actinin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=76.65 E-value=3.3 Score=48.95 Aligned_cols=83 Identities=13% Similarity=0.177 Sum_probs=67.0
Q ss_pred hhhhcccCCcccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHcccccccc-ccchHHHHHHHhhcCCCCCCCCChhHHHHH
Q 048038 297 LGRLLTDSGEPNIDVIKKLFDAIDENKDERLSASELKALIIGIRFEEID-LDQDDAVSKVLSDFDTSNDSHIDIKEFING 375 (591)
Q Consensus 297 l~~l~~~~~~~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~-~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a 375 (591)
+.+......+...+.++.+|+++|+...|.++.+|+..++...|.+.-. .....+..++++..|.++-|.+.+.||..-
T Consensus 734 l~R~sk~~sQ~v~~ElrAle~~~~~~d~~aa~~e~~~~~Lmslg~~~e~ee~~~~e~~~lvn~~n~l~~~qv~~~e~~dd 813 (890)
T KOG0035|consen 734 LERDSKGTSQYVLDELRALENEQDKIDGGAASPEELLRCLMSLGYNTEEEEQGIAEWFRLVNKKNPLIQGQVQLLEFEDD 813 (890)
T ss_pred HHhcccchhHHHHHHHHHHHhHHHHhhcccCCHHHHHHHHHhcCcccchhHHHHHHHHHHHhccCcccccceeHHHHHhH
Confidence 4455555567778999999999999999999999999999999875221 233566778888999999999999999887
Q ss_pred HHHH
Q 048038 376 IEKW 379 (591)
Q Consensus 376 ~~~~ 379 (591)
+.+-
T Consensus 814 l~R~ 817 (890)
T KOG0035|consen 814 LERE 817 (890)
T ss_pred hhhh
Confidence 6554
No 120
>KOG4578 consensus Uncharacterized conserved protein, contains KAZAL and TY domains [General function prediction only]
Probab=76.49 E-value=1.6 Score=45.55 Aligned_cols=65 Identities=20% Similarity=0.397 Sum_probs=50.7
Q ss_pred ccc-HHHHHHHhhhhcCCCCCCcCHHHHHHH---HHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHH
Q 048038 306 EPN-IDVIKKLFDAIDENKDERLSASELKAL---IIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGI 376 (591)
Q Consensus 306 ~~~-~~~Lr~lF~~iD~n~DG~Is~~ELk~~---l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~ 376 (591)
+++ +....=-|+.+|+|+++.|.+.|+|.. +.+-. -......++++-.|.|+|..|++.|+..-+
T Consensus 328 e~DeeRvv~w~F~qLdkN~nn~i~rrEwKpFK~~l~k~s------~~rkC~rk~~~yCDlNkDKkISl~Ew~~CL 396 (421)
T KOG4578|consen 328 EPDEERVVHWYFNQLDKNSNNDIERREWKPFKRVLLKKS------KPRKCSRKFFKYCDLNKDKKISLDEWRGCL 396 (421)
T ss_pred CCChhheeeeeeeeecccccCccchhhcchHHHHHHhhc------cHHHHhhhcchhcccCCCceecHHHHhhhh
Confidence 444 446667799999999999999999864 33222 245678889999999999999999986554
No 121
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=74.08 E-value=3.9 Score=47.38 Aligned_cols=67 Identities=18% Similarity=0.322 Sum_probs=56.1
Q ss_pred cccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHH
Q 048038 306 EPNIDVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGI 376 (591)
Q Consensus 306 ~~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~ 376 (591)
++...-+...|+..|+|++|+++.+|...+++.+... ..+.-+..++++.|..+++++.+.||.+.-
T Consensus 132 ~~~~~wi~~~~~~ad~~~~~~~~~~~~~~~~~~~n~~----l~~~~~~~~f~e~~~~~~~k~~~~~~~~~~ 198 (746)
T KOG0169|consen 132 SRREHWIHSIFQEADKNKNGHMSFDEVLDLLKQLNVQ----LSESKARRLFKESDNSQTGKLEEEEFVKFR 198 (746)
T ss_pred chHHHHHHHHHHHHccccccccchhhHHHHHHHHHHh----hhHHHHHHHHHHHHhhccceehHHHHHHHH
Confidence 4557778899999999999999999999998887654 456677888888899999999999987654
No 122
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=70.81 E-value=4.7 Score=34.55 Aligned_cols=29 Identities=10% Similarity=0.138 Sum_probs=25.3
Q ss_pred HHHHHHHhhcCCCCCCCCChhHHHHHHHH
Q 048038 350 DAVSKVLSDFDTSNDSHIDIKEFINGIEK 378 (591)
Q Consensus 350 ~ev~~lm~~~D~d~dG~Id~~EFl~a~~~ 378 (591)
+++.+.|+.+|.|++|.|+++|+...+.+
T Consensus 10 ~~l~~~F~~~D~d~~G~Is~~el~~~l~~ 38 (96)
T smart00027 10 AKYEQIFRSLDKNQDGTVTGAQAKPILLK 38 (96)
T ss_pred HHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 45678889999999999999999988765
No 123
>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=67.84 E-value=11 Score=42.64 Aligned_cols=74 Identities=14% Similarity=0.207 Sum_probs=63.9
Q ss_pred CCcccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHHHHH
Q 048038 304 SGEPNIDVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEKWLN 381 (591)
Q Consensus 304 ~~~~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~~~~ 381 (591)
.+.++....+..|..+|.|+.|..+.+.....++..+.+ ..++..++++++.|.+.+|.+.-.||..-+..-++
T Consensus 587 ~~~~~~~~~~~rf~~lD~~k~~~~~i~~v~~vlk~~~~~----~d~~~~~~~l~ea~~~~~g~v~l~e~~q~~s~~~~ 660 (680)
T KOG0042|consen 587 LTPEDFLRRKTRFAFLDADKKAYQAIADVLKVLKSENVG----WDEDRLHEELQEADENLNGFVELREFLQLMSAIKN 660 (680)
T ss_pred cCHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhcCC----CCHHHHHHHHHHHHHhhcceeeHHHHHHHHHHHhc
Confidence 467789999999999999999999999999999887733 56788899999999999999999999877666554
No 124
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=67.06 E-value=7.6 Score=32.45 Aligned_cols=32 Identities=25% Similarity=0.439 Sum_probs=27.6
Q ss_pred cHHHHHHHhhhhcCCCCCCcCHHHHHHHHHcc
Q 048038 308 NIDVIKKLFDAIDENKDERLSASELKALIIGI 339 (591)
Q Consensus 308 ~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~ 339 (591)
..+.++++++.+|.|++|.|+.+|+..++...
T Consensus 49 ~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~ 80 (88)
T cd00213 49 DPEAVDKIMKDLDVNKDGKVDFQEFLVLIGKL 80 (88)
T ss_pred CHHHHHHHHHHhccCCCCcCcHHHHHHHHHHH
Confidence 45678999999999999999999998876543
No 125
>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]
Probab=65.28 E-value=8.8 Score=42.16 Aligned_cols=70 Identities=14% Similarity=0.249 Sum_probs=52.4
Q ss_pred CcccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHc----cccccc-cccchHHHHHHHhhcCCCCCCCCChhHHHH
Q 048038 305 GEPNIDVIKKLFDAIDENKDERLSASELKALIIG----IRFEEI-DLDQDDAVSKVLSDFDTSNDSHIDIKEFIN 374 (591)
Q Consensus 305 ~~~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~----~~~~~~-~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~ 374 (591)
...+...++-.|+.+|.++||.|+..|++-.... +-...+ ..+.++...+++.-+-....++|+-.+|.+
T Consensus 346 ~k~t~~SleYwFrclDld~~G~Lt~~el~~fyeeq~~rm~~~~~e~l~fed~l~qi~DMvkP~~~~kItLqDlk~ 420 (493)
T KOG2562|consen 346 DKDTPASLEYWFRCLDLDGDGILTLNELRYFYEEQLQRMECMGQEALPFEDALCQIRDMVKPEDENKITLQDLKG 420 (493)
T ss_pred cCCCccchhhheeeeeccCCCcccHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHhCccCCCceeHHHHhh
Confidence 4556778999999999999999999999965432 211111 235567778888777777899999999876
No 126
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=65.25 E-value=3.4 Score=47.23 Aligned_cols=117 Identities=11% Similarity=0.139 Sum_probs=71.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhH-hHHHHHHHhhhhccchhhhHHHHHHhhhhhhhhcccCCcccHHHHHHHhhhhcCCCCC
Q 048038 247 VLIALILSVSMLISYCLYQVF-QPWIQKRRLAFAKHKHVISGILKHLRQRALGRLLTDSGEPNIDVIKKLFDAIDENKDE 325 (591)
Q Consensus 247 ~~is~ivsv~lli~Ysayq~l-hpWiq~~~~~~~~~~~l~~~il~~lk~~~l~~l~~~~~~~~~~~Lr~lF~~iD~n~DG 325 (591)
-++...+....-.++++.+++ |||+++...... ... +++..... ....+.-.+-.+.+.+...+-+.+.+|
T Consensus 428 dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~~~~~---~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (566)
T PLN03225 428 ELLKSMMRFKGRQRISAKAALAHPYFDREGLLGL---SVM----QNLRLQLF-RATQQDYGEAAAWVVFLMAKSGTEKEG 499 (566)
T ss_pred HHHHHHccCCcccCCCHHHHhCCcCcCCCCcccc---ccc----cccccccc-hhhHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 366677777778899999999 999976432100 000 00000000 000000011134455566677889999
Q ss_pred CcCHHHHHHHHHccccccccccchHHHH--HHHhhcCCCCCCCCChhHHHHHHH
Q 048038 326 RLSASELKALIIGIRFEEIDLDQDDAVS--KVLSDFDTSNDSHIDIKEFINGIE 377 (591)
Q Consensus 326 ~Is~~ELk~~l~~~~~~~~~~~~~~ev~--~lm~~~D~d~dG~Id~~EFl~a~~ 377 (591)
..+++|++.....-. .++.+.. .+.+.+|.++.|..+++|++....
T Consensus 500 ~~~e~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (566)
T PLN03225 500 GFTEAQLQELREKEP------KKKGSAQRNALASALRLQRKGVKTVARTVDEIP 547 (566)
T ss_pred CccHHHHHHhhhhcC------cchhhhhhhhHHHHHhhhhhhhhhhhhhhhccc
Confidence 999999998765431 2233333 488889999999999999987543
No 127
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=64.51 E-value=5.8 Score=43.27 Aligned_cols=31 Identities=26% Similarity=0.350 Sum_probs=26.3
Q ss_pred cHHHHHHHhhhhcCCCCCCcCHHHHHHHHHc
Q 048038 308 NIDVIKKLFDAIDENKDERLSASELKALIIG 338 (591)
Q Consensus 308 ~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~ 338 (591)
|......+|+.+|.|+||.|+.+|++.++..
T Consensus 355 E~~~~~~~F~~~D~d~DG~Is~eEf~~~~~~ 385 (391)
T PRK12309 355 EWLGSDAVFDALDLNHDGKITPEEMRAGLGA 385 (391)
T ss_pred HHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 3444589999999999999999999998754
No 128
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=64.40 E-value=5.4 Score=32.55 Aligned_cols=56 Identities=13% Similarity=0.232 Sum_probs=37.5
Q ss_pred cHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcC----CC---CCCCCChhHHHHH
Q 048038 308 NIDVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFD----TS---NDSHIDIKEFING 375 (591)
Q Consensus 308 ~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D----~d---~dG~Id~~EFl~a 375 (591)
..+++++.|+.+ .++-+.||.+||+..+..- +++-+.+.+. .+ ..|..||..|++.
T Consensus 4 s~eqv~~aFr~l-A~~KpyVT~~dLr~~l~pe-----------~aey~~~~Mp~~~~~~~~~~~~~~DY~~f~~~ 66 (69)
T PF08726_consen 4 SAEQVEEAFRAL-AGGKPYVTEEDLRRSLTPE-----------QAEYCISRMPPYEGPDGDAIPGAYDYESFTNS 66 (69)
T ss_dssp TCHHHHHHHHHH-CTSSSCEEHHHHHHHS-CC-----------CHHHHHCCSEC--SSS----TTEEECHHHHCC
T ss_pred CHHHHHHHHHHH-HcCCCcccHHHHHHHcCcH-----------HHHHHHHHCcccCCCCcCCCCCCcCHHHHHHH
Confidence 457889999999 7788999999999876432 2233333332 21 2367888888753
No 129
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=58.42 E-value=21 Score=33.72 Aligned_cols=67 Identities=10% Similarity=0.272 Sum_probs=48.0
Q ss_pred HHHHhhhh---cCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHHH
Q 048038 312 IKKLFDAI---DENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEKW 379 (591)
Q Consensus 312 Lr~lF~~i---D~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~~ 379 (591)
|+++|+.+ -..+...++-.-+..+++..++-+.. ....+++-+|..+-..+...|+|++|..++..-
T Consensus 1 L~~~F~~f~~fG~~~~~~m~~~~F~Kl~kD~~i~d~k-~t~tdvDiiF~Kvk~k~~~~I~f~~F~~aL~~l 70 (154)
T PF05517_consen 1 LEAVFKAFASFGKKNGTEMDSKNFAKLCKDCGIIDKK-LTSTDVDIIFSKVKAKGARKITFEQFLEALAEL 70 (154)
T ss_dssp HHHHHHHHHCSSTSTSSEEEHHHHHHHHHHTSS--SS-S-HHHHHHHHHHHT-SS-SEEEHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCccccccHHHHHHHHHHcCCCCCC-CchHHHHHHHHHhhcCCCcccCHHHHHHHHHHH
Confidence 34555554 35566678888888999888874444 678899999999877777789999999988653
No 130
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]
Probab=56.26 E-value=25 Score=39.07 Aligned_cols=64 Identities=19% Similarity=0.236 Sum_probs=42.1
Q ss_pred HHHHHHHhhh-hcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHH
Q 048038 309 IDVIKKLFDA-IDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEK 378 (591)
Q Consensus 309 ~~~Lr~lF~~-iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~ 378 (591)
.+++.++-.. -|.-+||.|+-+|+++.=.- .|..|..-...++-||..++|++++++|-.-+.+
T Consensus 72 n~~~v~Lla~iaD~tKDglisf~eF~afe~~------lC~pDal~~~aFqlFDr~~~~~vs~~~~~~if~~ 136 (694)
T KOG0751|consen 72 NDKIVRLLASIADQTKDGLISFQEFRAFESV------LCAPDALFEVAFQLFDRLGNGEVSFEDVADIFGQ 136 (694)
T ss_pred ChHHHHHHHhhhhhcccccccHHHHHHHHhh------ccCchHHHHHHHHHhcccCCCceehHHHHHHHhc
Confidence 3444455444 46778888888888764221 2344666677788888888888888887665433
No 131
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=55.87 E-value=58 Score=28.01 Aligned_cols=65 Identities=14% Similarity=0.167 Sum_probs=39.8
Q ss_pred HHHHHHHhhhhcCCCCCCcCHHHHHHHHHc-------cccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHH
Q 048038 309 IDVIKKLFDAIDENKDERLSASELKALIIG-------IRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGI 376 (591)
Q Consensus 309 ~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~-------~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~ 376 (591)
.+++|-+|+.+ .|++|.++..-+...+.. +|-...-...+..+...|+.. .++..|+.++|+.-+
T Consensus 2 ~dKyRylFsli-sd~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~~e~sv~sCF~~~--~~~~~I~~~~Fl~wl 73 (90)
T PF09069_consen 2 EDKYRYLFSLI-SDSNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGYIEPSVRSCFQQV--QLSPKITENQFLDWL 73 (90)
T ss_dssp HHHHHHHHHHH-S-TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT--HHHHHHHHHHT--TT-S-B-HHHHHHHH
T ss_pred hHHHHHHHHHH-cCCCCCCcHHHHHHHHHHHHHHHHHhCccccccCcHHHHHHHhccc--CCCCccCHHHHHHHH
Confidence 46889999999 899999999988876643 222211224677788888775 467789988886543
No 132
>COG4792 EscU Type III secretory pathway, component EscU [Intracellular trafficking and secretion]
Probab=55.79 E-value=2.7e+02 Score=29.36 Aligned_cols=67 Identities=25% Similarity=0.337 Sum_probs=45.4
Q ss_pred cCccccccccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHhC--CCccchhHHhhhcchhHHHHHHHh
Q 048038 76 YGFLPCTTTVLGNLFLIIVYGYLMYVAATYLSNGSELLLEILG--PGVVGGLFLPILGALPDAMLILVS 142 (591)
Q Consensus 76 yg~~pc~~~~~g~~fli~v~g~ll~~~a~~l~~g~e~L~~~lg--p~iiG~~i~~~lgslPE~~i~l~s 142 (591)
=|.+|=|..+....-++..++|++..|..++.+-.|.+..-.. .-.+---+-.+++++-|....++.
T Consensus 20 kGQV~kS~Eivs~v~~~al~~yf~l~g~~~~~~~~~ll~~~~~~~n~PF~~Al~~il~~ll~~~l~~v~ 88 (349)
T COG4792 20 KGQVVKSKEIVSAVQLLALVAYFMLFGDSYFEHLVELLLFTIELLNLPFSYALRQILGALLEELLYLVL 88 (349)
T ss_pred cCCcccHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhHHHHhcCcHHHHHHHHHHHHHHHHHHHHH
Confidence 3677777777777778888999999999999999998865433 112233344555666666554443
No 133
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=54.25 E-value=1.2e+02 Score=31.91 Aligned_cols=109 Identities=19% Similarity=0.281 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHhHHHHHHhcCCCchhhhhhhhhccccchhHHHHHHHHHhcccccccccc----chhh
Q 048038 436 FKAVLMLLIGTIIAAAFADPLVDAVDNFSAATSIPSFFISFIALPFATNSSEAVSAIIFASRKKIRTASLTF----SELY 511 (591)
Q Consensus 436 ~~~v~~Ll~g~~~~~~~A~~lV~si~~~a~~~gIs~~~Is~iilPlats~~E~vsai~~A~k~k~~~as~t~----s~i~ 511 (591)
...++.|..+..++=+.+-++-.|+.-+|++.+.-.-.+++.+. .-|+..|+|++.+. .|| .|+.
T Consensus 24 l~~~~~L~~~f~~iE~i~g~~s~SlaLLADa~Hml~D~~al~la---------l~A~~~a~r~~~~~--~TfGy~R~eiL 92 (296)
T COG1230 24 LLIALLLNLAFMLIEIIGGLLTGSLALLADALHMLSDALALLLA---------LIAIKLARRPATKR--FTFGYKRLEIL 92 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHhHHHHHHHHHHHHHH---------HHHHHHhcCCCCCC--CCccHhHHHHH
Confidence 34566677777777788888889999999999998888888774 45677888887765 565 3555
Q ss_pred hhhhHHHH-HHHHHHHHH-HHhc---CcccccchhHHHHHHHHHHHHHHH
Q 048038 512 GAVTMNNI-LCLSVFLAL-VYAR---GLTWDFSSEVLVILIVCLVMGAFA 556 (591)
Q Consensus 512 g~v~m~n~-l~l~vfl~l-v~~r---~l~w~fs~evlvil~v~~~~~~~~ 556 (591)
++.+-+=+ +++++++.| .+-| |-+-+. .+++++-++.++++.+.
T Consensus 93 aa~~nav~Li~~s~~I~~EAi~R~~~P~~i~~-~~ml~va~~GL~vN~~~ 141 (296)
T COG1230 93 AAFLNALLLIVVSLLILWEAIQRLLAPPPIHY-SGMLVVAIIGLVVNLVS 141 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCc-cchHHHHHHHHHHHHHH
Confidence 55444422 334455555 2222 333333 46777777777777666
No 134
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=53.58 E-value=14 Score=39.01 Aligned_cols=67 Identities=13% Similarity=0.104 Sum_probs=46.1
Q ss_pred HHHHHHHhhhhcCCCCCCcCHHHHHHHHHcc-ccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHHHHH
Q 048038 309 IDVIKKLFDAIDENKDERLSASELKALIIGI-RFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEKWLN 381 (591)
Q Consensus 309 ~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~-~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~~~~ 381 (591)
..-++-.|+.+|.+-||.+.+.++--.++.. |. .+-.+..++.+.|...||+|.|++|-+-....=+
T Consensus 295 ~~iiq~afk~f~v~eDg~~ge~~ls~ilq~~lgv------~~l~v~~lf~~i~q~d~~ki~~~~f~~fa~~~p~ 362 (412)
T KOG4666|consen 295 PVIIQYAFKRFSVAEDGISGEHILSLILQVVLGV------EVLRVPVLFPSIEQKDDPKIYASNFRKFAATEPN 362 (412)
T ss_pred HHHHHHHHHhcccccccccchHHHHHHHHHhcCc------ceeeccccchhhhcccCcceeHHHHHHHHHhCch
Confidence 4556667777777777777776665554432 22 2345667888889999999999999877655433
No 135
>PF08976 DUF1880: Domain of unknown function (DUF1880); InterPro: IPR015070 This entry represents EF-hand calcium-binding domain-containing protein 6 that negatively regulates the androgen receptor by recruiting histone deacetylase complex, and protein DJ-1 antagonises this inhibition by abrogation of this complex [].; PDB: 1WLZ_C.
Probab=52.88 E-value=10 Score=33.98 Aligned_cols=32 Identities=9% Similarity=0.371 Sum_probs=23.9
Q ss_pred ccchHHHHHHHhhcCCCCCCCCChhHHHHHHH
Q 048038 346 LDQDDAVSKVLSDFDTSNDSHIDIKEFINGIE 377 (591)
Q Consensus 346 ~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~ 377 (591)
...|++.+++++++-.|-.|++.|-||+..+.
T Consensus 3 iLtDeQFdrLW~e~Pvn~~GrLkY~eFL~kfs 34 (118)
T PF08976_consen 3 ILTDEQFDRLWNEMPVNAKGRLKYQEFLSKFS 34 (118)
T ss_dssp ---HHHHHHHHTTS-B-TTS-EEHHHHHHHT-
T ss_pred cccHHHhhhhhhhCcCCccCCEeHHHHHHHcc
Confidence 36799999999999999999999999998764
No 136
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=51.63 E-value=17 Score=32.00 Aligned_cols=34 Identities=21% Similarity=0.289 Sum_probs=27.8
Q ss_pred cccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHcc
Q 048038 306 EPNIDVIKKLFDAIDENKDERLSASELKALIIGI 339 (591)
Q Consensus 306 ~~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~ 339 (591)
.-..+.|.++++--|.|+||+++.+|+--++.-+
T Consensus 39 ~L~~~~L~~IW~LaD~~~dG~L~~~EF~iAm~Li 72 (104)
T PF12763_consen 39 GLPRDVLAQIWNLADIDNDGKLDFEEFAIAMHLI 72 (104)
T ss_dssp TSSHHHHHHHHHHH-SSSSSEEEHHHHHHHHHHH
T ss_pred CCCHHHHHHHHhhhcCCCCCcCCHHHHHHHHHHH
Confidence 4456899999999999999999999998776543
No 137
>KOG4004 consensus Matricellular protein Osteonectin/SPARC/BM-40 [Extracellular structures]
Probab=49.45 E-value=7.3 Score=38.14 Aligned_cols=53 Identities=25% Similarity=0.417 Sum_probs=41.2
Q ss_pred hhhhcC-CCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHH
Q 048038 316 FDAIDE-NKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFIN 374 (591)
Q Consensus 316 F~~iD~-n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~ 374 (591)
|-++|+ -.||.+|.-||......+ .+.+..+.+.++..|.|+||+|...|+-.
T Consensus 193 f~qld~~p~d~~~sh~el~pl~ap~------ipme~c~~~f~e~cd~~nd~~ial~ew~~ 246 (259)
T KOG4004|consen 193 FGQLDQHPIDGYLSHTELAPLRAPL------IPMEHCTTRFFETCDLDNDKYIALDEWAG 246 (259)
T ss_pred eccccCCCccccccccccccccCCc------ccHHhhchhhhhcccCCCCCceeHHHhhc
Confidence 344554 579999999987753322 26788899999999999999999999743
No 138
>KOG0998 consensus Synaptic vesicle protein EHS-1 and related EH domain proteins [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=49.01 E-value=8 Score=46.39 Aligned_cols=72 Identities=17% Similarity=0.268 Sum_probs=61.2
Q ss_pred CcccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHHHHHH
Q 048038 305 GEPNIDVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEKWLNE 382 (591)
Q Consensus 305 ~~~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~~~~~ 382 (591)
...+..++.++|.+.|.++||.|+-.+.+..+...| ...+.+.+++...|.++.|.+++.||.-++..-...
T Consensus 278 sp~d~~~~~~if~q~d~~~dG~I~s~~~~~~f~~~g------l~~~~l~~~w~l~d~~n~~~ls~~ef~~~~~~~~~~ 349 (847)
T KOG0998|consen 278 SPSDKQKYSKIFSQVDKDNDGSISSNEARNIFLPFG------LSKPRLAHVWLLADTQNTGTLSKDEFALAMHLLEQK 349 (847)
T ss_pred ChHHHHHHHHHHHhccccCCCcccccccccccccCC------CChhhhhhhhhhcchhccCcccccccchhhhhhhhh
Confidence 456788899999999999999999999988777655 446789999999999999999999998887655443
No 139
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=48.13 E-value=12 Score=38.44 Aligned_cols=48 Identities=25% Similarity=0.342 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhH-hHHHHHHH-hhhhccchhhhHHHHHHhhhh
Q 048038 246 AVLIALILSVSMLISYCLYQVF-QPWIQKRR-LAFAKHKHVISGILKHLRQRA 296 (591)
Q Consensus 246 ~~~is~ivsv~lli~Ysayq~l-hpWiq~~~-~~~~~~~~l~~~il~~lk~~~ 296 (591)
-.++-+++.+..-.++++++++ |||+.++. ..+..| ++.....+++|.
T Consensus 244 k~LvrrML~~dP~kRIta~EAL~HpWi~~r~~~As~~H---~~dtvd~lrkfN 293 (355)
T KOG0033|consen 244 KSLIRRMLTVNPKKRITADEALKHPWICNRERVASAIH---RQDTVDCLKKFN 293 (355)
T ss_pred HHHHHHHhccChhhhccHHHHhCCchhcchHHHHHHhh---hHHHHHHHHHhh
Confidence 3578889999999999999999 99998753 222222 233444555554
No 140
>TIGR03142 cytochro_ccmI cytochrome c-type biogenesis protein CcmI. This TPR repeat-containing protein is the CcmI protein (also called CycH) of c-type cytochrome biogenesis. CcmI is thought to act as an apo-cytochrome c chaperone. This model describes the N-terminal region of the protein, Members of this protein family
Probab=44.66 E-value=1e+02 Score=27.53 Aligned_cols=24 Identities=13% Similarity=0.277 Sum_probs=11.3
Q ss_pred HHHHhhhhcCC-CCCCcCHHHHHHH
Q 048038 312 IKKLFDAIDEN-KDERLSASELKAL 335 (591)
Q Consensus 312 Lr~lF~~iD~n-~DG~Is~~ELk~~ 335 (591)
.|+--.++|+| .+|.|+.+|..++
T Consensus 41 yr~qL~ELe~d~~~G~l~~~e~~~~ 65 (117)
T TIGR03142 41 YRDRLAELERDLAEGLLDEAEAEAA 65 (117)
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 33333444433 3456666655443
No 141
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=44.02 E-value=20 Score=31.97 Aligned_cols=29 Identities=28% Similarity=0.379 Sum_probs=22.2
Q ss_pred cccHHHHHHHhhhhcCCCCCCcCHHHHHH
Q 048038 306 EPNIDVIKKLFDAIDENKDERLSASELKA 334 (591)
Q Consensus 306 ~~~~~~Lr~lF~~iD~n~DG~Is~~ELk~ 334 (591)
.+.+.-++..|+.-|.|+||.||.+|...
T Consensus 84 ~~~e~C~~~F~~~CD~n~d~~Is~~EW~~ 112 (113)
T PF10591_consen 84 MPPEHCARPFFRSCDVNKDGKISLDEWCN 112 (113)
T ss_dssp STTGGGHHHHHHHH-TT-SSSEEHHHHHH
T ss_pred hhhHHHHHHHHHHcCCCCCCCCCHHHHcc
Confidence 34455688999999999999999999754
No 142
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=43.76 E-value=12 Score=40.79 Aligned_cols=76 Identities=22% Similarity=0.307 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhH-hHHHHHHHhhhhc--cchhhhH-----HHHHHhhhhhhhhcccCCcccHHHHHHHhh
Q 048038 246 AVLIALILSVSMLISYCLYQVF-QPWIQKRRLAFAK--HKHVISG-----ILKHLRQRALGRLLTDSGEPNIDVIKKLFD 317 (591)
Q Consensus 246 ~~~is~ivsv~lli~Ysayq~l-hpWiq~~~~~~~~--~~~l~~~-----il~~lk~~~l~~l~~~~~~~~~~~Lr~lF~ 317 (591)
-.++...+....-.++++.|++ |||++.......+ ......+ -.+.++++.++....... ...++..|+
T Consensus 270 kd~i~~ll~~dp~~R~ta~~~L~HpWi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 346 (382)
T KOG0032|consen 270 KDFIRKLLEFDPRKRLTAAQALQHPWIKSIGEATNIPLDISVLSRSKQFLSMSKLKKLALRVLAESLS---ISGLKEMFK 346 (382)
T ss_pred HHHHHHhcccCcccCCCHHHHhcCccccCCcccccccccchhhhhHHHHHHHHHHHHHHHHHHhhhhh---HHHHHHHHH
Confidence 3456666666667899999999 9999864322111 1111111 122233333333333222 889999999
Q ss_pred hhcCCCC
Q 048038 318 AIDENKD 324 (591)
Q Consensus 318 ~iD~n~D 324 (591)
.+|.+++
T Consensus 347 ~~~~~~~ 353 (382)
T KOG0032|consen 347 LMDTDNN 353 (382)
T ss_pred hhccccc
Confidence 9999888
No 143
>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]
Probab=42.38 E-value=51 Score=32.59 Aligned_cols=73 Identities=22% Similarity=0.332 Sum_probs=48.0
Q ss_pred cccCCcccH-HHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhh--cCCCCCCCCChhHHHHH
Q 048038 301 LTDSGEPNI-DVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSD--FDTSNDSHIDIKEFING 375 (591)
Q Consensus 301 ~~~~~~~~~-~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~--~D~d~dG~Id~~EFl~a 375 (591)
...++.|+. -.+|.+-++.|.|+||+||..|+--.+....... ...++...++-+. .|....|.--=..|-.+
T Consensus 125 mEKLgapQTHL~lK~mikeVded~dgklSfreflLIfrkaaagE--L~~ds~~~~LAr~~eVDVskeGV~GAknFFeA 200 (244)
T KOG0041|consen 125 MEKLGAPQTHLGLKNMIKEVDEDFDGKLSFREFLLIFRKAAAGE--LQEDSGLLRLARLSEVDVSKEGVSGAKNFFEA 200 (244)
T ss_pred HHHhCCchhhHHHHHHHHHhhcccccchhHHHHHHHHHHHhccc--cccchHHHHHHHhcccchhhhhhhhHHHHHHH
Confidence 334555553 4689999999999999999999865554433321 2345666666554 78887776555555444
No 144
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]
Probab=41.66 E-value=39 Score=37.57 Aligned_cols=72 Identities=11% Similarity=0.239 Sum_probs=49.1
Q ss_pred HHHHHhhhhcCCCCCCcCHHHHHHHHHccccccc-ccc-chHHHHHHHhhcCCCCCCCCChhHHHHHHHHHHHHHhh
Q 048038 311 VIKKLFDAIDENKDERLSASELKALIIGIRFEEI-DLD-QDDAVSKVLSDFDTSNDSHIDIKEFINGIEKWLNEAMQ 385 (591)
Q Consensus 311 ~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~-~~~-~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~~~~~~k~ 385 (591)
..+..|+-+|++++|.+|.++.++.+.....+.. ... +.+-++. .|-.++...++|.||..-..++..|...
T Consensus 109 l~~~aFqlFDr~~~~~vs~~~~~~if~~t~l~~~~~f~~d~efI~~---~Fg~~~~r~~ny~~f~Q~lh~~~~E~~~ 182 (694)
T KOG0751|consen 109 LFEVAFQLFDRLGNGEVSFEDVADIFGQTNLHHHIPFNWDSEFIKL---HFGDIRKRHLNYAEFTQFLHEFQLEHAE 182 (694)
T ss_pred HHHHHHHHhcccCCCceehHHHHHHHhccccccCCCccCCcchHHH---HhhhHHHHhccHHHHHHHHHHHHHHHHH
Confidence 4567899999999999999999998877665322 222 2233333 3333455678888888888777665543
No 145
>PF05478 Prominin: Prominin; InterPro: IPR008795 The prominins are an emerging family of proteins that, among the multispan membrane proteins, display a novel topology. Mouse and Homo sapiens prominin and (Mus musculus) prominin-like 1 (PROML1) are predicted to contain five membrane spanning domains, with an N-terminal domain exposed to the extracellular space followed by four, alternating small cytoplasmic and large extracellular, loops and a cytoplasmic C-terminal domain []. The exact function of prominin is unknown although in humans defects in PROM1, the gene coding for prominin, cause retinal degeneration [].; GO: 0016021 integral to membrane
Probab=41.27 E-value=71 Score=38.33 Aligned_cols=118 Identities=15% Similarity=0.186 Sum_probs=66.9
Q ss_pred chhHHhhhcchhHHHHHHHhhcc--------c-chh-hhhccceeehhhhhhHHHHHHHHHHHHHhhhcccccccCcccc
Q 048038 123 GGLFLPILGALPDAMLILVSGLS--------G-TKE-TAQSQVSVGMGLLAGSTVMLSTVIWGTCVVVGKCDLRESDSVA 192 (591)
Q Consensus 123 G~~i~~~lgslPE~~i~l~s~l~--------~-~~~-~a~~~v~v~~G~l~GS~i~~ltli~G~~~l~g~~~~~~~~~~~ 192 (591)
|..+......+|..+...++..- . ... ..=++.+-..|.++.+.++++.+..-+.++.|-|.++.+.
T Consensus 370 ~~~i~~~a~~i~~~~~~~~s~~~~~~~~~~~~~~~~~~~y~~yR~~~~lil~~~llLIv~~~~lGLl~G~~G~~~~~--- 446 (806)
T PF05478_consen 370 GKQIRSQAKQIPNQIDSNISDILNNTERSSRSFEDEYEKYDSYRWIVGLILCCVLLLIVLCLLLGLLCGCCGYRRRA--- 446 (806)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCC---
Confidence 55555566666666443333321 1 011 1114556678889999999988888888888999865431
Q ss_pred ccCCccccccccccceeecccchhhhHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHHHHHHHHHhH-hHH
Q 048038 193 IDGQNTKGFRLTGTGVSTDVWTCYAARIMAISVIPFVVVQLPQMLNSTSGRHLAVLIALILSVSMLISYCLYQVF-QPW 270 (591)
Q Consensus 193 ~~~~~~~~f~~~~~gv~~~~~~~~~a~im~ls~~~~li~~lp~~~~~~~~~~~~~~is~ivsv~lli~Ysayq~l-hpW 270 (591)
..+.+.-..++ .++.++++++..+++ ...+..++.+.+++.--+|+.. +||
T Consensus 447 ---~p~~r~c~~~t----------Gg~~Lm~gv~~~Flf--------------~~~l~l~~~~~Fl~G~~~~~lvC~p~ 498 (806)
T PF05478_consen 447 ---DPTDRGCSSNT----------GGNFLMAGVGLSFLF--------------SWFLMLLVLFYFLVGGNTYTLVCQPL 498 (806)
T ss_pred ---CCcccCCCCCc----------cHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHhhhheeeecCC
Confidence 11112212222 334444444333211 1245666777777888888877 999
No 146
>KOG1707 consensus Predicted Ras related/Rac-GTP binding protein [Defense mechanisms]
Probab=39.05 E-value=22 Score=40.41 Aligned_cols=36 Identities=25% Similarity=0.386 Sum_probs=31.3
Q ss_pred CcccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccc
Q 048038 305 GEPNIDVIKKLFDAIDENKDERLSASELKALIIGIR 340 (591)
Q Consensus 305 ~~~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~ 340 (591)
++.-.+-+..+|.++|.|+||.++.+|++++..-..
T Consensus 310 s~~~~~Fl~~~f~~~D~d~Dg~L~p~El~~LF~~~P 345 (625)
T KOG1707|consen 310 SPKGYRFLVDVFEKFDRDNDGALSPEELKDLFSTAP 345 (625)
T ss_pred cHHHHHHHHHHHHhccCCCCCCcCHHHHHHHhhhCC
Confidence 445588899999999999999999999999887654
No 147
>PF09156 Anthrax-tox_M: Anthrax toxin lethal factor, middle domain; InterPro: IPR015239 Anthrax toxin is a plasmid-encoded toxin complex produced by the Gram-positive, spore-forming bacteria, Bacillus anthracis. The toxin consists of three non-toxic proteins: the protective antigen (PA), the lethal factor (LF) and the edema factor (EF) []. These component proteins self-assemble at the surface of host cell receptors, yielding a series of toxic complexes that can produce shock-like symptoms and death. Anthrax toxin is one of a large group of Bacillus and Clostridium exotoxins referred to as binary toxins, forming independent enzymatic (A moiety) and binding (B moiety) components. The LF and EF proteins are the enzymes (A moiety) that act on cytosolic substrates, while PA is a multi-functional protein (B moiety) that binds to cell surface receptors, mediates the assembly and internalisation of the complexes, and delivers them to the host cell endosome []. Once PA is attached to the host receptor [], it must then be cleaved by a host cell surface (furin family) protease before it is able to bind EF and LF. The cleavage of the N terminus of PA enables the C-terminal fragment to self-associate into a ring-shaped heptameric complex (prepore) that can bind LF or EF competitively. The PA-LF/EF complex is then internalised by endocytosis, and delivered to the endosome, where PA forms a pore in the endosomal membrane in order to translocate LF and EF to the cytosol. LF is a Zn-dependent metalloprotease that cleaves and inactivates mitogen-activated protein (MAP) kinases, kills macrophages, and causes death of the host by inhibiting cell proliferation [, ]. EF is a calcium-and calmodulin-dependent adenylyl cyclase that can cause edema (fluid-filled swelling) when associated with PA. EF is not toxic by itself, and is required for the survival of germinated Bacillus spores within macrophages at the early stages of infection. EF dramatically elevates the level of host intracellular cAMP, a ubiquitous messenger that integrates many processes of the cell; increases in cAMP can interfere with host intracellular signalling []. This entry represents the central domain found in the lethal factor protein of anthrax toxin.; PDB: 1PWV_B 1PWW_A 1PWQ_B 1PWP_B 1J7N_A 1JKY_A 1PWU_A 4DV8_A 1YQY_A 1ZXV_A ....
Probab=38.81 E-value=1.8e+02 Score=28.00 Aligned_cols=62 Identities=19% Similarity=0.358 Sum_probs=41.8
Q ss_pred HHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCCh--hHHHHHH
Q 048038 313 KKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDI--KEFINGI 376 (591)
Q Consensus 313 r~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~--~EFl~a~ 376 (591)
+++.+.+.-|.+..++.+| ++.+++++.+-.+...++ -+++++.+..|.++-.+. .||+...
T Consensus 53 kellkriqidssdflstee-keflkklqidirdslsee-ekellnriqvdssnplsekekeflkkl 116 (287)
T PF09156_consen 53 KELLKRIQIDSSDFLSTEE-KEFLKKLQIDIRDSLSEE-EKELLNRIQVDSSNPLSEKEKEFLKKL 116 (287)
T ss_dssp HHHHHHS-CCCSSSS-HHH-HHHHHHHHCCHCTSSSHH-HHHHHHCCSTTTTSS-THHHHHHHHHH
T ss_pred HHHHHHhccCchhhcchhH-HHHHHHhccchhhhhhHH-HHHHHHHhhccCCCCccHHHHHHHHHh
Confidence 4456677888999998876 788888887666655544 466788887777777664 4576644
No 148
>KOG4629 consensus Predicted mechanosensitive ion channel [Cell wall/membrane/envelope biogenesis]
Probab=33.72 E-value=1.1e+02 Score=36.18 Aligned_cols=66 Identities=17% Similarity=0.214 Sum_probs=48.8
Q ss_pred HHHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHHHHHHHhh
Q 048038 309 IDVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEKWLNEAMQ 385 (591)
Q Consensus 309 ~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~~~~~~k~ 385 (591)
+..-+++|+.+-+.++-.+..+.+... ..+|+++..|+-++...+..|++++|.+-+..-..|.+.
T Consensus 403 ~~aA~~iF~nv~~p~~~~i~ld~~~~f-----------~~~E~a~~~~slfe~~~~~~Itrs~~~~~iv~~~~ERk~ 468 (714)
T KOG4629|consen 403 KIAARKIFKNVAKPGVILIDLDDLLRF-----------MGDEEAERAFSLFEGASDENITRSSFKEWIVNIYRERKA 468 (714)
T ss_pred HHHHHHHHhccCCCCccchhhhhhhhc-----------CCHHHHHHHHHhhhhhcccCccHHHHHHHHHHHHHHHHH
Confidence 334566777777777666666665443 568999999999998777779999999888776666554
No 149
>KOG4347 consensus GTPase-activating protein VRP [General function prediction only]
Probab=32.63 E-value=46 Score=38.26 Aligned_cols=28 Identities=14% Similarity=0.363 Sum_probs=13.5
Q ss_pred HHHHHHhhcCCCCCCCCChhHHHHHHHH
Q 048038 351 AVSKVLSDFDTSNDSHIDIKEFINGIEK 378 (591)
Q Consensus 351 ev~~lm~~~D~d~dG~Id~~EFl~a~~~ 378 (591)
-.+++|...|.+++|.+++.+|+.+...
T Consensus 556 ~~~rlF~l~D~s~~g~Ltf~~lv~gL~~ 583 (671)
T KOG4347|consen 556 FLERLFRLLDDSMTGLLTFKDLVSGLSI 583 (671)
T ss_pred HHHHHHHhcccCCcceeEHHHHHHHHHH
Confidence 3444444555555555555555544433
No 150
>PF14658 EF-hand_9: EF-hand domain
Probab=32.50 E-value=63 Score=26.20 Aligned_cols=32 Identities=13% Similarity=0.294 Sum_probs=27.8
Q ss_pred cccHHHHHHHhhhhcCCCC-CCcCHHHHHHHHH
Q 048038 306 EPNIDVIKKLFDAIDENKD-ERLSASELKALII 337 (591)
Q Consensus 306 ~~~~~~Lr~lF~~iD~n~D-G~Is~~ELk~~l~ 337 (591)
.++...|+++-+++|+++. |.++.+.+...++
T Consensus 31 ~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~ 63 (66)
T PF14658_consen 31 SPEESELQDLINELDPEGRDGSVNFDTFLAIMR 63 (66)
T ss_pred CCcHHHHHHHHHHhCCCCCCceEeHHHHHHHHH
Confidence 5677799999999999998 9999999887665
No 151
>PRK09509 fieF ferrous iron efflux protein F; Reviewed
Probab=29.34 E-value=6.6e+02 Score=26.02 Aligned_cols=49 Identities=10% Similarity=0.080 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHhHHHHHHhcCCCchhhhhhhhhccc
Q 048038 435 SFKAVLMLLIGTIIAAAFADPLVDAVDNFSAATSIPSFFISFIALPFAT 483 (591)
Q Consensus 435 ~~~~v~~Ll~g~~~~~~~A~~lV~si~~~a~~~gIs~~~Is~iilPlat 483 (591)
+...+..++.|..++......+.++++.+...-.++...+++++..++.
T Consensus 77 r~E~l~~l~~~~~l~~~~~~~~~esi~~l~~~~~~~~~~~~l~~~~~~~ 125 (299)
T PRK09509 77 KAESLAALAQSMFISGSALFLFLTGIQHLISPTPMNDPGVGIIVTLVAL 125 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcchhHHHHHHHHH
Confidence 3455667777888888888899999999876555555666665544443
No 152
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=28.93 E-value=55 Score=30.47 Aligned_cols=52 Identities=21% Similarity=0.224 Sum_probs=32.4
Q ss_pred CCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCC-------CCCCCChhHHHHHHHHHHH
Q 048038 324 DERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTS-------NDSHIDIKEFINGIEKWLN 381 (591)
Q Consensus 324 DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d-------~dG~Id~~EFl~a~~~~~~ 381 (591)
=+.||.+|+.++-+-+. .....+++++++|..| .++.|||+-|-.-+.-++.
T Consensus 5 ~~~lsp~eF~qLq~y~e------ys~kklkdvl~eF~~~g~~~~~~~~~~Id~egF~~Fm~~yLe 63 (138)
T PF14513_consen 5 WVSLSPEEFAQLQKYSE------YSTKKLKDVLKEFHGDGSLAKYNPEEPIDYEGFKLFMKTYLE 63 (138)
T ss_dssp -S-S-HHHHHHHHHHHH------H----HHHHHHHH-HTSGGGGGEETTEE-HHHHHHHHHHHTT
T ss_pred eeccCHHHHHHHHHHHH------HHHHHHHHHHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHc
Confidence 46789999988755443 2345788899998544 3679999999887777653
No 153
>PHA02650 hypothetical protein; Provisional
Probab=28.47 E-value=1.6e+02 Score=24.72 Aligned_cols=13 Identities=31% Similarity=0.593 Sum_probs=8.3
Q ss_pred ChhHHHHHHHHHH
Q 048038 368 DIKEFINGIEKWL 380 (591)
Q Consensus 368 d~~EFl~a~~~~~ 380 (591)
||+||++-...-+
T Consensus 19 DFnnFI~VVkSVL 31 (81)
T PHA02650 19 DFNNFIDVVKSVL 31 (81)
T ss_pred HHHHHHHHHHHHH
Confidence 5777777665544
No 154
>COG0798 ACR3 Arsenite efflux pump ACR3 and related permeases [Inorganic ion transport and metabolism]
Probab=28.39 E-value=7.7e+02 Score=26.50 Aligned_cols=82 Identities=17% Similarity=0.219 Sum_probs=48.7
Q ss_pred cCCCchhhhhhhhhccccchhHHHHHHHHHhccccccccccchhhhhhhHHHHHHHHHH--HHHHHhcCcccccch----
Q 048038 467 TSIPSFFISFIALPFATNSSEAVSAIIFASRKKIRTASLTFSELYGAVTMNNILCLSVF--LALVYARGLTWDFSS---- 540 (591)
Q Consensus 467 ~gIs~~~Is~iilPlats~~E~vsai~~A~k~k~~~as~t~s~i~g~v~m~n~l~l~vf--l~lv~~r~l~w~fs~---- 540 (591)
--.|+..+|++++-+|...+ -+-...--.|+..+.+ .+.|+.|.++++.++ +++++..-.+-+.+.
T Consensus 107 ~~~pey~~GlILlglApC~a-MVivw~~La~Gd~~~t-------lv~Va~n~l~qiv~y~~~~~~~l~v~~~~v~~~~i~ 178 (342)
T COG0798 107 PDEPEYRAGLILLGLAPCIA-MVIVWSGLAKGDRELT-------LVLVAFNSLLQIVLYAPLGKFFLGVISISVPFWTIA 178 (342)
T ss_pred CCCHHHHHHHHHHHhhhhHH-HHHHHHhhccCcHhhh-------hHHHHHHHHHHHHHHHHHHHHHHhhccccccHHHHH
Confidence 45779999999999999533 2233333345555555 588999999998765 333443333334443
Q ss_pred -hHHHHHHHHHHHHHHH
Q 048038 541 -EVLVILIVCLVMGAFA 556 (591)
Q Consensus 541 -evlvil~v~~~~~~~~ 556 (591)
.+++.+.+=++.|...
T Consensus 179 ~Sv~lyl~iPli~G~lT 195 (342)
T COG0798 179 KSVLLYLGIPLIAGVLT 195 (342)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 2333334445555544
No 155
>COG2860 Predicted membrane protein [Function unknown]
Probab=28.17 E-value=1.9e+02 Score=28.76 Aligned_cols=67 Identities=19% Similarity=0.307 Sum_probs=47.7
Q ss_pred ccchhHHHHHHHHHhccccccccccchhhhhhhHHHHHHHH--HHHHHHHh-cCcccccchhHHHHHHHHHHHHHHHh
Q 048038 483 TNSSEAVSAIIFASRKKIRTASLTFSELYGAVTMNNILCLS--VFLALVYA-RGLTWDFSSEVLVILIVCLVMGAFAS 557 (591)
Q Consensus 483 ts~~E~vsai~~A~k~k~~~as~t~s~i~g~v~m~n~l~l~--vfl~lv~~-r~l~w~fs~evlvil~v~~~~~~~~~ 557 (591)
+-..|++|--..|.|+|+|+- |-.+++.+-.++ .+==+... .|..|-=+++.+.+..++.++..+..
T Consensus 13 Gi~afA~sGaL~A~r~~~Dif--------Gv~~la~vTAiGGGtiRDlLLG~~Pv~wv~~p~yl~~~~~~a~~~~~~~ 82 (209)
T COG2860 13 GIAAFAISGALAAGRRRMDIF--------GVLILAVVTAIGGGTIRDLLLGHYPVFWVKHPEYLLIAAVAAVLTFFVA 82 (209)
T ss_pred HHHHHHHHHHHHHHhccCCee--------eehhHHHHHHhcchHHHHHHccCCCceeecCccHHHHHHHHHHHHHHHH
Confidence 337788999999999999999 888888776654 33222334 68999988877777655555444443
No 156
>PRK03612 spermidine synthase; Provisional
Probab=27.49 E-value=6.3e+02 Score=28.62 Aligned_cols=21 Identities=10% Similarity=0.093 Sum_probs=16.4
Q ss_pred cccchhhhhhhHHHHHHHHHH
Q 048038 505 LTFSELYGAVTMNNILCLSVF 525 (591)
Q Consensus 505 ~t~s~i~g~v~m~n~l~l~vf 525 (591)
-+.+.+|+..++|++++..++
T Consensus 145 ~~~g~ly~~ntlGa~~G~l~~ 165 (521)
T PRK03612 145 HNVATVLAADYLGALVGGLAF 165 (521)
T ss_pred hhhhhhHhHHhHHHHHHHHHH
Confidence 457899999999999985433
No 157
>cd07313 terB_like_2 tellurium resistance terB-like protein, subgroup 2. This family includes several uncharacterized bacterial proteins. Protein sequence homology analysis shows they are similar to tellurium resistance protein terB, but the function of this family is unknown.
Probab=26.89 E-value=75 Score=27.19 Aligned_cols=56 Identities=14% Similarity=0.122 Sum_probs=37.2
Q ss_pred CCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHHHH
Q 048038 323 KDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEKWL 380 (591)
Q Consensus 323 ~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~~~ 380 (591)
-||.++.+|....-.-+... --..+++.+++++.+....+...++.+|...+..-.
T Consensus 12 aDG~v~~~E~~~i~~~l~~~--~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (104)
T cd07313 12 ADGEYDEEERAAIDRLLAER--FGLDAEEAAELLAEAEALEEEAPDLYEFTSLIKEHF 67 (104)
T ss_pred HcCCCCHHHHHHHHHHHHHH--hCcCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhC
Confidence 37888888877543322110 003467778888888777777888999988876543
No 158
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=26.66 E-value=6.1e+02 Score=24.79 Aligned_cols=11 Identities=36% Similarity=0.199 Sum_probs=4.6
Q ss_pred HHHHHHHHHhh
Q 048038 375 GIEKWLNEAMQ 385 (591)
Q Consensus 375 a~~~~~~~~k~ 385 (591)
.+.+.+-++++
T Consensus 33 eil~~LleaQk 43 (206)
T PF06570_consen 33 EILPHLLEAQK 43 (206)
T ss_pred HHHHHHHHHHh
Confidence 34444444443
No 159
>PF14163 SieB: Superinfection exclusion protein B
Probab=26.58 E-value=2.4e+02 Score=26.21 Aligned_cols=18 Identities=11% Similarity=0.233 Sum_probs=11.1
Q ss_pred cccCCcccHHHHHHHhhh
Q 048038 301 LTDSGEPNIDVIKKLFDA 318 (591)
Q Consensus 301 ~~~~~~~~~~~Lr~lF~~ 318 (591)
.+..+++|...|++.+..
T Consensus 76 l~~Lt~~EkavL~~~~~~ 93 (151)
T PF14163_consen 76 LNSLTPEEKAVLREFYIQ 93 (151)
T ss_pred HHhCCHHHHHHHHHHHHC
Confidence 344566667777766654
No 160
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=26.00 E-value=1.2e+02 Score=28.47 Aligned_cols=60 Identities=12% Similarity=0.138 Sum_probs=41.2
Q ss_pred hhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHHH
Q 048038 317 DAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEKW 379 (591)
Q Consensus 317 ~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~~ 379 (591)
+.+..||+|.+|.+++-+++.-+.-. .+-+-.+.--++..|-|+|+.|-..+-..-+.+.
T Consensus 78 e~FSeDG~GnlsfddFlDmfSV~sE~---APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~l 137 (189)
T KOG0038|consen 78 EVFSEDGRGNLSFDDFLDMFSVFSEM---APRDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSL 137 (189)
T ss_pred HHhccCCCCcccHHHHHHHHHHHHhh---ChHHhhhhheeEEeecCCCCcccHHHHHHHHHHH
Confidence 44568999999999998876544321 1333444556777899999999888765554443
No 161
>PF00404 Dockerin_1: Dockerin type I repeat; InterPro: IPR018242 Gram-positive, thermophilic anaerobes such as Clostridium thermocellum or Clostridium cellulolyticum secretes a highly active and thermostable cellulase complex (cellulosome) responsible for the degradation of crystalline cellulose [, ]. The cellulosome contains at least 30 polypeptides, the majority of the enzymes are endoglucanases (3.2.1.4 from EC), but there are also some xylanases (3.2.1.8 from EC), beta-glucosidases (3.2.1.21 from EC) and endo-beta-1,3-1,4-glucanases (3.2.1.73 from EC). Complete sequence data for many of these enzymes has been obtained. A majority of these proteins contain a highly conserved type I dockerin domain of about 65 to 70 residues, which is generally (but not always) located in the C terminus. The dockerin domain is the binding partner of the cohesin domain (see IPR002102 from INTERPRO). The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome []. The dockerin domain contains a tandem repeat of two calcium-binding loop-helix motifs (distinct from EF-hand Ca-binding motifs). These motifs are about 24 amino acids in length. This entry represents these repeated Ca-binding motifs.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3P0D_J 1OHZ_B 2CCL_B 1DAV_A 1DAQ_A 2VN5_B 2VN6_B.
Probab=25.96 E-value=76 Score=19.80 Aligned_cols=14 Identities=36% Similarity=0.518 Sum_probs=8.5
Q ss_pred cCCCCCCcCHHHHH
Q 048038 320 DENKDERLSASELK 333 (591)
Q Consensus 320 D~n~DG~Is~~ELk 333 (591)
|.|+||.++.-++.
T Consensus 1 DvN~DG~vna~D~~ 14 (21)
T PF00404_consen 1 DVNGDGKVNAIDLA 14 (21)
T ss_dssp -TTSSSSSSHHHHH
T ss_pred CCCCCCcCCHHHHH
Confidence 56777777765543
No 162
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=25.11 E-value=1.6e+02 Score=28.43 Aligned_cols=57 Identities=16% Similarity=0.196 Sum_probs=43.1
Q ss_pred CCcccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHHHHHHH
Q 048038 304 SGEPNIDVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEKWLNEA 383 (591)
Q Consensus 304 ~~~~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~~~~~~ 383 (591)
.+.-..+++.++|.++++.+.+.+|..|+.+++++... --|+--+.++...|..-+
T Consensus 90 eGrFvp~kFe~iF~kya~~~~d~LT~~E~~~m~~~nr~------------------------~~D~~GW~a~~~EW~~~y 145 (174)
T PF05042_consen 90 EGRFVPQKFEEIFSKYAKTGPDALTLRELWRMLKGNRN------------------------ANDPFGWFAAFFEWGALY 145 (174)
T ss_pred CCcCCHHHHHHHHHHhCCCCCCCcCHHHHHHHHHhccc------------------------cCCcchhhhhhhHHHHHH
Confidence 45556889999999999999999999999998886432 234555667777776544
Q ss_pred h
Q 048038 384 M 384 (591)
Q Consensus 384 k 384 (591)
.
T Consensus 146 ~ 146 (174)
T PF05042_consen 146 I 146 (174)
T ss_pred H
Confidence 4
No 163
>COG1283 NptA Na+/phosphate symporter [Inorganic ion transport and metabolism]
Probab=25.05 E-value=6.5e+02 Score=28.80 Aligned_cols=248 Identities=18% Similarity=0.124 Sum_probs=0.0
Q ss_pred HHHHHHH-HHHHhHHHHHHHHHHHH---------hC-CCccchhHHhhhcchhHHHHHHHhhcccchhhhhccceeehhh
Q 048038 93 IVYGYLM-YVAATYLSNGSELLLEI---------LG-PGVVGGLFLPILGALPDAMLILVSGLSGTKETAQSQVSVGMGL 161 (591)
Q Consensus 93 ~v~g~ll-~~~a~~l~~g~e~L~~~---------lg-p~iiG~~i~~~lgslPE~~i~l~s~l~~~~~~a~~~v~v~~G~ 161 (591)
..+|+-+ +.+-++++++.+-+... ++ +.+.|..+.+.+|.+--.-+..+..+.+....-.=....++..
T Consensus 136 ~~~GiGl~f~sl~l~~~a~~pl~~s~~~~~~i~~l~~~~~~~l~~g~~lt~l~~SS~A~i~i~~~l~~~glis~~~~~al 215 (533)
T COG1283 136 VLFGIGLIFLSLELLGQATEPLRQSPAFSDFIAKLSDDPIVALLIGALLTALIQSSLAAIGILLSLTSQGLISLEAALAL 215 (533)
T ss_pred hHHHHHHHHHHHHHHHHhhhhhhhchhHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchhHHHHH
Q ss_pred hhhHHHHHHHHHHHHHhhhcccccccCccccccCCccccccccccceeecccchhhhHHHHHHHHHHHHHHhhhhhcccc
Q 048038 162 LAGSTVMLSTVIWGTCVVVGKCDLRESDSVAIDGQNTKGFRLTGTGVSTDVWTCYAARIMAISVIPFVVVQLPQMLNSTS 241 (591)
Q Consensus 162 l~GS~i~~ltli~G~~~l~g~~~~~~~~~~~~~~~~~~~f~~~~~gv~~~~~~~~~a~im~ls~~~~li~~lp~~~~~~~ 241 (591)
+.|+|+.-..-....+.-.+.-..+. ...-.+..+++ .++.+|-+.....
T Consensus 216 vLGaNlGt~i~a~laa~~~~~~arr~-----------------------------a~~~ll~~~iG-~li~lp~~~~~~~ 265 (533)
T COG1283 216 VLGANLGTTITAVLAALGASAAARRV-----------------------------ALGNLLFNLIG-VLIFLPVIHLLAT 265 (533)
T ss_pred HHHHhhhchhHHHHHhcccchhHHHH-----------------------------HHHHHHHHHHh-HHHHHHHHHHHHH
Q ss_pred c-----------hhHHHHHHHHHHHHHHHHHHHHHhH--hHHHHHHHhhhhccchhhhHHHHHHhhhh------------
Q 048038 242 G-----------RHLAVLIALILSVSMLISYCLYQVF--QPWIQKRRLAFAKHKHVISGILKHLRQRA------------ 296 (591)
Q Consensus 242 ~-----------~~~~~~is~ivsv~lli~Ysayq~l--hpWiq~~~~~~~~~~~l~~~il~~lk~~~------------ 296 (591)
. ......+--+...+..+.++.-.+- ..-++.......+-+++.+..+. .....
T Consensus 266 ~~~~l~~~~~~~ia~aH~lfNi~~ai~~~pf~~~la~~~~~li~~~~~~~~~~~~Ld~~~l~-sp~~aL~~A~rEvl~~~ 344 (533)
T COG1283 266 FASKLSLPPAALIAHAHLLFNIVLALAALPFTGLLARFVTRLIPGDEDDEIEPKHLDETALD-SPVVALANAAREVLRLG 344 (533)
T ss_pred HhhccCCChHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCchhhhhhHhhccHhhhC-CHHHHHHHHHHHHHHHH
Q ss_pred ---------hhhhcccCCcccHHHHHHHhhhhc-----------CCCCCCcCHHHHHHHHHccccccccccchHHHHHHH
Q 048038 297 ---------LGRLLTDSGEPNIDVIKKLFDAID-----------ENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVL 356 (591)
Q Consensus 297 ---------l~~l~~~~~~~~~~~Lr~lF~~iD-----------~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm 356 (591)
.....++ ..+..+++++.=+..| +=+...+|++|-+.+..-+...+.-...-|-++++.
T Consensus 345 d~ie~ml~~~~~~~~~-~~~~~~~i~~~e~~vd~~~~~Ik~YL~~ls~~~Lse~es~r~~~iid~a~~lE~IgDiie~l~ 423 (533)
T COG1283 345 DSIEQMLERLYEYIEG-DAKKVKEIRKLEDAVDRLYEEIKLYLARLSKEGLSEEESRRWAEIIDAAINLEHIGDIIERLL 423 (533)
T ss_pred HHHHHHHHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q ss_pred hhcCCCCCCCCChhHH
Q 048038 357 SDFDTSNDSHIDIKEF 372 (591)
Q Consensus 357 ~~~D~d~dG~Id~~EF 372 (591)
+..|.--++.+.++|+
T Consensus 424 ~~~~kk~~~~~~fse~ 439 (533)
T COG1283 424 ELADKKIANGRAFSED 439 (533)
T ss_pred HHHHHHHhcCCCCCHH
No 164
>PHA01815 hypothetical protein
Probab=24.69 E-value=2.7e+02 Score=20.80 Aligned_cols=12 Identities=33% Similarity=0.708 Sum_probs=7.8
Q ss_pred HHHHHHHHHHHH
Q 048038 573 LYPFSLALVYVL 584 (591)
Q Consensus 573 lY~~sl~lv~~l 584 (591)
.|.+++..+|-+
T Consensus 41 fyiifl~viyal 52 (55)
T PHA01815 41 FYIIFLMVIYAL 52 (55)
T ss_pred HHHHHHHHHHHH
Confidence 476777777654
No 165
>PF07499 RuvA_C: RuvA, C-terminal domain; InterPro: IPR011114 In prokaryotes, RuvA, RuvB, and RuvC process the universal DNA intermediate of homologous recombination, termed Holliday junction. The tetrameric DNA helicase RuvA specifically binds to the Holliday junction and facilitates the isomerization of the junction from the stacked folded configuration to the square-planar structure []. In the RuvA tetramer, each subunit consists of three domains, I, II and III, where I and II form the major core that is responsible for Holliday junction binding and base pair rearrangements of Holliday junction executed at the crossover point, whereas domain III regulates branch migration through direct contact with RuvB. The domain represents the C-terminal domain III of RuvA. This domain plays a significant role in the ATP-dependent branch migration of the hetero-duplex through direct contact with RuvB []. Within the Holliday junction, this domain makes no interaction with the DNA.; GO: 0005524 ATP binding, 0009378 four-way junction helicase activity, 0006281 DNA repair, 0006310 DNA recombination, 0009379 Holliday junction helicase complex; PDB: 1HJP_A 1CUK_A 1C7Y_A 1IXS_A 1IXR_B 1BVS_E 2ZTC_A 2ZTD_B 2H5X_A.
Probab=24.58 E-value=62 Score=24.04 Aligned_cols=43 Identities=16% Similarity=0.288 Sum_probs=30.3
Q ss_pred HHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHHH
Q 048038 329 ASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEKW 379 (591)
Q Consensus 329 ~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~~ 379 (591)
.+|..++|..+|+. +.|+++.++..+. ....+-+|-++...++
T Consensus 3 ~~d~~~AL~~LGy~------~~e~~~av~~~~~--~~~~~~e~~ik~aLk~ 45 (47)
T PF07499_consen 3 LEDALEALISLGYS------KAEAQKAVSKLLE--KPGMDVEELIKQALKL 45 (47)
T ss_dssp HHHHHHHHHHTTS-------HHHHHHHHHHHHH--STTS-HHHHHHHHHCC
T ss_pred HHHHHHHHHHcCCC------HHHHHHHHHHhhc--CCCCCHHHHHHHHHhh
Confidence 36788899999964 6788888888765 5556677777766554
No 166
>PF01595 DUF21: Domain of unknown function DUF21; InterPro: IPR002550 This transmembrane region has no known function. Many of the sequences in this family are annotated as hemolysins, however this is due to a similarity to Q54318 from SWISSPROT that does not contain this domain. This domain is found in the N terminus of the proteins adjacent to two intracellular CBS domains (IPR000644 from INTERPRO).
Probab=23.93 E-value=6e+02 Score=23.70 Aligned_cols=18 Identities=28% Similarity=0.379 Sum_probs=12.5
Q ss_pred CCCCCcCHHHHHHHHHcc
Q 048038 322 NKDERLSASELKALIIGI 339 (591)
Q Consensus 322 n~DG~Is~~ELk~~l~~~ 339 (591)
+.+...++||++..+...
T Consensus 156 ~~~~~~s~eel~~lv~~~ 173 (183)
T PF01595_consen 156 EEDPAVSEEELRSLVEEG 173 (183)
T ss_pred cccCCCCHHHHHHHHHhH
Confidence 456777888888776543
No 167
>COG4035 Predicted membrane protein [Function unknown]
Probab=23.73 E-value=1.6e+02 Score=25.51 Aligned_cols=50 Identities=22% Similarity=0.478 Sum_probs=34.3
Q ss_pred ccccchhHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 048038 535 TWDFSSEVLVILIVCLVMGAFASFRTNFPLWTCSIAYALYPFSLALVYVLDYFFGW 590 (591)
Q Consensus 535 ~w~fs~evlvil~v~~~~~~~~~~r~~~~~~~~~~~~~lY~~sl~lv~~l~~~~~~ 590 (591)
.|--|..+..-..-|+++|++..-|..|.|.+-++. ..+++..+|.. +||
T Consensus 59 s~~~~v~~~~~~ag~flig~v~gMRPGYGR~Etv~G-----t~LA~l~wL~~-Lgw 108 (108)
T COG4035 59 SWMRSVPVPLYMAGCFLIGFVLGMRPGYGRVETVVG-----TFLAVLLWLYF-LGW 108 (108)
T ss_pred ecccCCchHHHHHHHHHHHHhhccCCCCceeehhHH-----HHHHHHHHHhh-hCC
Confidence 455555555556668899999988999998887665 23445555554 887
No 168
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=23.67 E-value=1.4e+02 Score=35.15 Aligned_cols=55 Identities=11% Similarity=0.207 Sum_probs=44.0
Q ss_pred CCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHHHHHHHHH
Q 048038 321 ENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGIEKWLN 381 (591)
Q Consensus 321 ~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~~~~~~ 381 (591)
+-+.|+|+-+.-|.++..-|.. ..-+.+|+.--|.|+||+.|..||-.+|.--+.
T Consensus 26 kp~~gfitg~qArnfflqS~LP------~~VLaqIWALsDldkDGrmdi~EfSIAmkLi~l 80 (1118)
T KOG1029|consen 26 KPGQGFITGDQARNFFLQSGLP------TPVLAQIWALSDLDKDGRMDIREFSIAMKLIKL 80 (1118)
T ss_pred CCCCCccchHhhhhhHHhcCCC------hHHHHHHHHhhhcCccccchHHHHHHHHHHHHH
Confidence 3577999999888887776653 456788888899999999999999999855443
No 169
>PF01023 S_100: S-100/ICaBP type calcium binding domain; InterPro: IPR013787 The calcium-binding domain found in S100 and CaBP-9k proteins is a subfamily of the EF-hand calcium-binding domain []. S100s are small dimeric acidic calcium and zinc-binding proteins abundant in the brain, with S100B playing an important role in modulating the proliferation and differentiation of neurons and glia cells []. S100 proteins have two different types of calcium-binding sites: a low affinity one with a special structure, and a 'normal' EF-hand type high-affinity site. Calbindin-D9k (CaBP-9k) also belong to this family of proteins, but it does not form dimers. CaBP-9k is a cytosolic protein expressed in a variety of tissues. Although its precise function is unknown, it appears to be under the control of the steroid hormones oestrogen and progesterone in the female reproductive system []. In the intestine, CaBP-9k may be involved in calcium absorption by mediating intracellular diffusion []. This entry represents a subdomain of the calcium-binding domain found in S100, CaBP-9k, and related proteins.; PDB: 2RGI_A 4DUQ_B 2KAY_B 2KAX_A 2CNP_A 1CNP_A 1A03_A 1JWD_B 2JTT_A 1XK4_B ....
Probab=23.61 E-value=74 Score=23.46 Aligned_cols=30 Identities=33% Similarity=0.491 Sum_probs=23.0
Q ss_pred HHHHHHHhhhhc--CCCCCCcCHHHHHHHHHc
Q 048038 309 IDVIKKLFDAID--ENKDERLSASELKALIIG 338 (591)
Q Consensus 309 ~~~Lr~lF~~iD--~n~DG~Is~~ELk~~l~~ 338 (591)
+..+-++|+++- ...+.+++.+||++++..
T Consensus 5 i~~iI~vFhkYa~~~Gd~~~Lsk~Elk~Ll~~ 36 (44)
T PF01023_consen 5 IETIIDVFHKYAGKEGDKDTLSKKELKELLEK 36 (44)
T ss_dssp HHHHHHHHHHHHTSSSSTTSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCeEcHHHHHHHHHH
Confidence 456778888875 346778999999998864
No 170
>PHA02844 putative transmembrane protein; Provisional
Probab=23.60 E-value=2.3e+02 Score=23.54 Aligned_cols=13 Identities=31% Similarity=0.593 Sum_probs=8.5
Q ss_pred ChhHHHHHHHHHH
Q 048038 368 DIKEFINGIEKWL 380 (591)
Q Consensus 368 d~~EFl~a~~~~~ 380 (591)
|++||++-...-+
T Consensus 19 DFnnFI~vVksVL 31 (75)
T PHA02844 19 DFNNFIDVVKSVL 31 (75)
T ss_pred HHHHHHHHHHHHH
Confidence 5777777665544
No 171
>PF14293 YWFCY: YWFCY protein
Probab=23.43 E-value=2.7e+02 Score=22.26 Aligned_cols=40 Identities=23% Similarity=0.400 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHH---HHHHHHhHhHHHHHHHhhhhccchhhhHHHHHHh
Q 048038 246 AVLIALILSVSMLI---SYCLYQVFQPWIQKRRLAFAKHKHVISGILKHLR 293 (591)
Q Consensus 246 ~~~is~ivsv~lli---~Ysayq~lhpWiq~~~~~~~~~~~l~~~il~~lk 293 (591)
..-.+|.+|+.+++ -|.+|.+|+.|= -...+.++++.+.+
T Consensus 12 Imdf~R~iSI~~l~ih~Y~~CY~af~~wg--------~t~~v~DrIL~n~~ 54 (61)
T PF14293_consen 12 IMDFMRAISILFLVIHFYWFCYEAFQEWG--------LTIGVVDRILLNFQ 54 (61)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------CcHHHHHHHHHHHH
Confidence 33455555555554 467888888772 22334455555544
No 172
>PRK12821 aspartyl/glutamyl-tRNA amidotransferase subunit C-like protein; Provisional
Probab=23.03 E-value=7.2e+02 Score=27.82 Aligned_cols=30 Identities=30% Similarity=0.443 Sum_probs=21.2
Q ss_pred CcCHHHHHHHHHccccccccccchHHHHHHHhhc
Q 048038 326 RLSASELKALIIGIRFEEIDLDQDDAVSKVLSDF 359 (591)
Q Consensus 326 ~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~ 359 (591)
.++++|++..-+-...+ .+|+|.+++.+++
T Consensus 388 ~ItkEeVkKLAkLARLe----LSEEElEkl~~dL 417 (477)
T PRK12821 388 QLNKDELKKLARLVMFD----LDDAELEKLQVEF 417 (477)
T ss_pred cCCHHHHHHHHHHhCCC----CCHHHHHHHHHHH
Confidence 68889988764444443 5688888887775
No 173
>COG0786 GltS Na+/glutamate symporter [Amino acid transport and metabolism]
Probab=22.52 E-value=3.6e+02 Score=29.51 Aligned_cols=46 Identities=26% Similarity=0.428 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHhC-C-CccchhHHhhhcchhH
Q 048038 89 LFLIIVYGYLMYVAATYLSNGSELLLEILG-P-GVVGGLFLPILGALPD 135 (591)
Q Consensus 89 ~fli~v~g~ll~~~a~~l~~g~e~L~~~lg-p-~iiG~~i~~~lgslPE 135 (591)
...-++...++....+++.+-.. +++++- | .++||+++++++-+-.
T Consensus 7 ~~~tl~~a~lllllG~~l~kki~-fl~k~~IPepVvgG~i~ail~~~~~ 54 (404)
T COG0786 7 ALETLILAILLLLLGRFLVKKIK-FLKKYCIPEPVVGGLIFAILLLLLH 54 (404)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhH-HHHHccCCcchHHHHHHHHHHHHHH
Confidence 34444555666667777766554 455555 6 5999999888765443
No 174
>PF03616 Glt_symporter: Sodium/glutamate symporter; InterPro: IPR004445 This is a family of sodium/glutamate symporters (glutamate permeases), which catalyse the sodium-dependent uptake of extracellular glutamate. The protein is located in the inner membrane.; GO: 0015501 glutamate:sodium symporter activity, 0015813 L-glutamate transport, 0016021 integral to membrane
Probab=22.18 E-value=1.9e+02 Score=31.26 Aligned_cols=41 Identities=24% Similarity=0.493 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHhC-C-CccchhHHhhhcch
Q 048038 92 IIVYGYLMYVAATYLSNGSELLLEILG-P-GVVGGLFLPILGAL 133 (591)
Q Consensus 92 i~v~g~ll~~~a~~l~~g~e~L~~~lg-p-~iiG~~i~~~lgsl 133 (591)
-+.+..++...++++ +..-.+++++- | .++||++.+++...
T Consensus 8 tl~la~ilLliG~~L-r~ki~~lqk~~IPasvIgGli~~il~~~ 50 (368)
T PF03616_consen 8 TLALASILLLIGKFL-RAKIPFLQKLFIPASVIGGLIFAILPLI 50 (368)
T ss_pred HHHHHHHHHHHHHHH-HHHhHHHHHccCCchHHHHHHHHHHHHH
Confidence 344444555555555 44556777777 6 69999998877433
No 175
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=21.77 E-value=1.3e+02 Score=31.91 Aligned_cols=66 Identities=12% Similarity=0.003 Sum_probs=49.1
Q ss_pred cccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCCCCCCCCChhHHHH
Q 048038 306 EPNIDVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFIN 374 (591)
Q Consensus 306 ~~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~ 374 (591)
-+.-+.++..|.-+|.+++|.++..|--..+.-+-.. .-..+-++--++.||.+.||.+...+|--
T Consensus 255 vpvsd~l~~~f~LFde~~tg~~D~re~v~~lavlc~p---~~t~~iiq~afk~f~v~eDg~~ge~~ls~ 320 (412)
T KOG4666|consen 255 VPVSDKLAPTFMLFDEGTTGNGDYRETVKTLAVLCGP---PVTPVIIQYAFKRFSVAEDGISGEHILSL 320 (412)
T ss_pred cchhhhhhhhhheecCCCCCcccHHHHhhhheeeeCC---CCcHHHHHHHHHhcccccccccchHHHHH
Confidence 3456899999999999999999987755444322211 13456677778999999999999977644
No 176
>KOG0039 consensus Ferric reductase, NADH/NADPH oxidase and related proteins [Inorganic ion transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=21.62 E-value=87 Score=36.62 Aligned_cols=69 Identities=17% Similarity=0.306 Sum_probs=52.3
Q ss_pred ccHHHHHHHhhhhcCCCCCCcCHHHHHHHHHcccc----ccccccchHHHHHHHhhcCCCCCCCCChhHHHHHH
Q 048038 307 PNIDVIKKLFDAIDENKDERLSASELKALIIGIRF----EEIDLDQDDAVSKVLSDFDTSNDSHIDIKEFINGI 376 (591)
Q Consensus 307 ~~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~----~~~~~~~~~ev~~lm~~~D~d~dG~Id~~EFl~a~ 376 (591)
.-.++++-.|+..|. +||.++++|++..+...-. .......++....+|++.|.++.|++.++++..-.
T Consensus 15 ~~d~~l~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~ll 87 (646)
T KOG0039|consen 15 SYDDKLQTFFDMYDK-GDGKLTEEEVRELIMSSISANWLSLIKKQTEEYAALIMEELDPDHKGYITNEDLEILL 87 (646)
T ss_pred ChhHHHHHHHHHHhh-hcCCccHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHhhhhccccccceeeecchhHHH
Confidence 346789999999999 9999999999987654321 11223566778899999999999988877765543
No 177
>PF13194 DUF4010: Domain of unknown function (DUF4010)
Probab=21.57 E-value=6.5e+02 Score=24.99 Aligned_cols=28 Identities=25% Similarity=0.311 Sum_probs=22.9
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHhhcC
Q 048038 562 FPLWTCSIAYALYPFSLALVYVLDYFFG 589 (591)
Q Consensus 562 ~~~~~~~~~~~lY~~sl~lv~~l~~~~~ 589 (591)
+.++.++..-++|..-+++..+....+|
T Consensus 123 ~~L~~Al~Fa~l~~~i~~~~~~~~~~~G 150 (211)
T PF13194_consen 123 FELKSALKFALLFAVILLLSRAAQRWFG 150 (211)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 5588888888899888888888877766
No 178
>PHA02819 hypothetical protein; Provisional
Probab=21.44 E-value=2.6e+02 Score=22.94 Aligned_cols=13 Identities=38% Similarity=0.634 Sum_probs=8.6
Q ss_pred ChhHHHHHHHHHH
Q 048038 368 DIKEFINGIEKWL 380 (591)
Q Consensus 368 d~~EFl~a~~~~~ 380 (591)
|++||++-...-+
T Consensus 19 DFnnFI~VVksVL 31 (71)
T PHA02819 19 DFNNFINVVKSVL 31 (71)
T ss_pred HHHHHHHHHHHHH
Confidence 5777777665544
No 179
>PF09068 EF-hand_2: EF hand; InterPro: IPR015153 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=21.12 E-value=1.6e+02 Score=26.88 Aligned_cols=71 Identities=20% Similarity=0.251 Sum_probs=41.9
Q ss_pred ccHHHHHHHhhhhcCCC--CCCcCHHHHHHHHHcccc----cccc---cc-------chHHHHHHHhhcCCCCCCCCChh
Q 048038 307 PNIDVIKKLFDAIDENK--DERLSASELKALIIGIRF----EEID---LD-------QDDAVSKVLSDFDTSNDSHIDIK 370 (591)
Q Consensus 307 ~~~~~Lr~lF~~iD~n~--DG~Is~~ELk~~l~~~~~----~~~~---~~-------~~~ev~~lm~~~D~d~dG~Id~~ 370 (591)
-+...+.+.|++...++ |..++.+|+...+..+-. +.+. .+ .+--++=+++.+|.+++|.|.--
T Consensus 38 v~l~~v~~~f~~~~l~~~~d~~l~v~~l~~~L~~iy~~l~~~~p~~~~i~~~~v~~a~~L~ln~Ll~vyD~~rtG~I~vl 117 (127)
T PF09068_consen 38 VDLSNVIEAFREHGLNQSNDSSLSVSQLETLLSSIYEFLNKRLPTLHQIPSRPVDLAVDLLLNWLLNVYDSQRTGKIRVL 117 (127)
T ss_dssp --HHHHHHHHHHTT---T-TSEEEHHHHHHHHHHHHHHHHHHSTTS--HH-----HHHHHHHHHHHHHH-TT--SEEEHH
T ss_pred eeHHHHHHHHHHcCCCcccCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCchhHHHHHHHHHHHHHHHhCCCCCCeeehh
Confidence 34666777887766543 577999999987765431 1111 11 22334567778999999999999
Q ss_pred HHHHHHH
Q 048038 371 EFINGIE 377 (591)
Q Consensus 371 EFl~a~~ 377 (591)
+|-.+..
T Consensus 118 s~KvaL~ 124 (127)
T PF09068_consen 118 SFKVALI 124 (127)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9877653
No 180
>KOG1707 consensus Predicted Ras related/Rac-GTP binding protein [Defense mechanisms]
Probab=20.81 E-value=1.8e+02 Score=33.33 Aligned_cols=54 Identities=20% Similarity=0.310 Sum_probs=37.9
Q ss_pred cHHHHHHHhhhhcCCCCCCcCHHHHHHHHHccccccccccchHHHHHHHhhcCC
Q 048038 308 NIDVIKKLFDAIDENKDERLSASELKALIIGIRFEEIDLDQDDAVSKVLSDFDT 361 (591)
Q Consensus 308 ~~~~Lr~lF~~iD~n~DG~Is~~ELk~~l~~~~~~~~~~~~~~ev~~lm~~~D~ 361 (591)
....++++|+-.|.|+||.++..|+-+.=++.-...-+....+++...+++.=.
T Consensus 193 ~v~al~RIFki~D~d~D~~Lsd~Eln~fQ~~CF~~pl~p~~l~~vk~vv~e~~p 246 (625)
T KOG1707|consen 193 CVKALKRIFKISDSDNDGALSDAELNDFQKKCFNTPLDPQELEDVKNVVQEICP 246 (625)
T ss_pred HHHHHHHHHhhhccccccccchhhhhHHHHHhcCCCCCHHHHHHHHHHHHhhcC
Confidence 478899999999999999999999987654432222222345566666665544
No 181
>PHA03054 IMV membrane protein; Provisional
Probab=20.72 E-value=2.9e+02 Score=22.73 Aligned_cols=13 Identities=31% Similarity=0.603 Sum_probs=8.3
Q ss_pred ChhHHHHHHHHHH
Q 048038 368 DIKEFINGIEKWL 380 (591)
Q Consensus 368 d~~EFl~a~~~~~ 380 (591)
|++||++-.+.-+
T Consensus 19 Df~~Fi~vV~sVl 31 (72)
T PHA03054 19 DLTDFIEIVKSVL 31 (72)
T ss_pred HHHHHHHHHHHHH
Confidence 5777777665544
Done!