Query 048039
Match_columns 204
No_of_seqs 297 out of 1676
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 09:33:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048039.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048039hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1fi2_A Oxalate oxidase, germin 100.0 1.7E-49 5.8E-54 323.1 19.8 194 9-203 1-197 (201)
2 3kgl_A Cruciferin; 11S SEED gl 100.0 6.2E-30 2.1E-34 230.0 13.7 154 44-202 287-443 (466)
3 3ksc_A LEGA class, prolegumin; 100.0 5E-29 1.7E-33 225.7 16.5 157 41-202 319-478 (496)
4 3qac_A 11S globulin SEED stora 100.0 3.7E-29 1.3E-33 224.9 13.1 155 43-202 286-443 (465)
5 2e9q_A 11S globulin subunit be 100.0 1.4E-28 4.8E-33 221.6 13.1 147 51-202 294-442 (459)
6 3fz3_A Prunin; TREE NUT allerg 100.0 1.5E-28 5.3E-33 222.7 12.7 157 41-202 355-514 (531)
7 1fxz_A Glycinin G1; proglycini 99.9 3.5E-27 1.2E-31 213.5 17.4 155 44-203 302-459 (476)
8 3c3v_A Arachin ARAH3 isoform; 99.9 2.3E-27 7.7E-32 215.6 15.9 148 51-203 344-493 (510)
9 2d5f_A Glycinin A3B4 subunit; 99.9 2.8E-27 9.5E-32 214.8 12.7 155 42-202 329-484 (493)
10 2cav_A Protein (canavalin); vi 99.9 1.5E-26 5.2E-31 207.9 15.0 157 40-202 243-412 (445)
11 1uij_A Beta subunit of beta co 99.9 1.2E-26 4.1E-31 207.2 14.2 157 40-202 211-383 (416)
12 2ea7_A 7S globulin-1; beta bar 99.9 4.9E-26 1.7E-30 204.1 15.0 158 39-202 227-399 (434)
13 1dgw_A Canavalin; duplicated s 99.9 9.7E-26 3.3E-30 179.9 12.9 149 43-201 3-166 (178)
14 3s7i_A Allergen ARA H 1, clone 99.9 1.7E-25 5.7E-30 199.5 12.6 154 42-201 226-407 (418)
15 2vqa_A SLL1358 protein, MNCA; 99.9 4.5E-23 1.5E-27 179.8 16.3 159 36-203 194-352 (361)
16 2phl_A Phaseolin; plant SEED s 99.9 1.4E-23 4.8E-28 186.0 12.2 137 57-202 223-371 (397)
17 2e9q_A 11S globulin subunit be 99.9 1.1E-22 3.9E-27 183.1 12.4 137 63-203 47-236 (459)
18 2ea7_A 7S globulin-1; beta bar 99.9 3.3E-22 1.1E-26 179.2 14.0 136 58-200 37-185 (434)
19 2cav_A Protein (canavalin); vi 99.9 4.8E-22 1.6E-26 178.7 14.5 153 41-201 46-211 (445)
20 1uij_A Beta subunit of beta co 99.9 4.4E-22 1.5E-26 177.6 13.7 136 58-200 25-173 (416)
21 1fxz_A Glycinin G1; proglycini 99.9 5.6E-22 1.9E-26 179.5 12.8 134 63-202 32-227 (476)
22 2phl_A Phaseolin; plant SEED s 99.9 1.5E-21 5.1E-26 173.0 13.1 137 57-200 27-181 (397)
23 3qac_A 11S globulin SEED stora 99.9 2.7E-21 9.4E-26 173.9 13.0 138 59-202 31-237 (465)
24 3ksc_A LEGA class, prolegumin; 99.9 1.9E-21 6.4E-26 176.2 11.8 134 62-200 29-214 (496)
25 3s7i_A Allergen ARA H 1, clone 99.9 5E-21 1.7E-25 170.7 13.7 134 58-200 20-168 (418)
26 2d5f_A Glycinin A3B4 subunit; 99.8 7.8E-21 2.7E-25 172.6 12.5 138 62-203 28-231 (493)
27 2vqa_A SLL1358 protein, MNCA; 99.8 9.1E-20 3.1E-24 158.8 15.5 149 43-201 20-171 (361)
28 3kgl_A Cruciferin; 11S SEED gl 99.8 2.7E-20 9.1E-25 167.5 12.0 135 63-201 27-244 (466)
29 3c3v_A Arachin ARAH3 isoform; 99.8 3.7E-20 1.3E-24 168.2 12.6 137 61-201 30-268 (510)
30 3fz3_A Prunin; TREE NUT allerg 99.8 1.2E-19 4.2E-24 164.5 11.8 136 62-201 31-296 (531)
31 1j58_A YVRK protein; cupin, de 99.8 6.6E-19 2.2E-23 154.9 16.1 153 40-202 222-374 (385)
32 1j58_A YVRK protein; cupin, de 99.7 3.5E-18 1.2E-22 150.2 9.8 147 44-201 48-196 (385)
33 1dgw_X Canavalin; duplicated s 99.7 2.8E-17 9.7E-22 114.3 5.2 74 45-119 3-76 (79)
34 3h8u_A Uncharacterized conserv 99.6 3.8E-15 1.3E-19 110.6 10.2 84 78-167 38-121 (125)
35 3ibm_A Cupin 2, conserved barr 99.6 6.2E-14 2.1E-18 110.3 14.7 118 36-162 11-132 (167)
36 1lr5_A Auxin binding protein 1 99.6 4.8E-14 1.7E-18 109.7 13.1 85 78-163 40-127 (163)
37 2fqp_A Hypothetical protein BP 99.6 2.1E-14 7.3E-19 102.5 10.1 77 78-159 17-93 (97)
38 3l2h_A Putative sugar phosphat 99.6 3.5E-14 1.2E-18 110.3 12.0 85 78-169 45-131 (162)
39 2xlg_A SLL1785 protein, CUCA; 99.5 2E-14 7E-19 119.4 10.3 116 40-159 8-137 (239)
40 1v70_A Probable antibiotics sy 99.5 6.8E-14 2.3E-18 99.3 10.5 77 78-161 27-103 (105)
41 3es1_A Cupin 2, conserved barr 99.5 3.3E-14 1.1E-18 112.6 9.5 81 77-165 77-157 (172)
42 3i7d_A Sugar phosphate isomera 99.5 9.6E-14 3.3E-18 108.6 11.5 85 78-169 42-129 (163)
43 3ht1_A REMF protein; cupin fol 99.5 1.6E-13 5.4E-18 103.8 11.3 81 78-166 38-120 (145)
44 3lag_A Uncharacterized protein 99.5 1.3E-14 4.6E-19 104.5 4.9 77 78-158 16-92 (98)
45 2oa2_A BH2720 protein; 1017534 99.5 2.7E-13 9.3E-18 104.0 12.1 84 78-162 42-125 (148)
46 2gu9_A Tetracenomycin polyketi 99.5 3.4E-13 1.2E-17 97.3 11.0 77 78-161 20-98 (113)
47 1x82_A Glucose-6-phosphate iso 99.5 2.3E-12 7.9E-17 103.2 15.8 100 60-162 49-156 (190)
48 3fjs_A Uncharacterized protein 99.5 2.2E-13 7.4E-18 100.3 8.8 71 78-156 35-105 (114)
49 4e2g_A Cupin 2 conserved barre 99.5 3E-13 1E-17 100.2 9.4 76 78-162 40-115 (126)
50 2bnm_A Epoxidase; oxidoreducta 99.5 7.3E-13 2.5E-17 105.7 12.1 82 74-159 112-197 (198)
51 3kgz_A Cupin 2 conserved barre 99.4 3.8E-13 1.3E-17 104.8 9.8 78 77-162 42-119 (156)
52 1o4t_A Putative oxalate decarb 99.4 4.8E-13 1.6E-17 100.9 10.1 77 76-159 54-130 (133)
53 3jzv_A Uncharacterized protein 99.4 5.4E-13 1.8E-17 105.0 10.2 78 77-162 51-128 (166)
54 2b8m_A Hypothetical protein MJ 99.4 9.4E-13 3.2E-17 96.5 9.7 75 78-160 26-101 (117)
55 2ozi_A Hypothetical protein RP 99.4 2.2E-13 7.5E-18 98.3 5.8 78 78-159 16-93 (98)
56 2pfw_A Cupin 2, conserved barr 99.4 1.1E-12 3.9E-17 95.6 9.6 75 78-162 33-107 (116)
57 2f4p_A Hypothetical protein TM 99.4 2.6E-12 8.8E-17 98.7 11.9 78 77-162 46-124 (147)
58 2vpv_A Protein MIF2, MIF2P; nu 99.4 1.3E-12 4.3E-17 102.8 9.3 75 78-159 87-162 (166)
59 1vj2_A Novel manganese-contain 99.4 6.7E-13 2.3E-17 99.1 7.2 78 76-161 45-122 (126)
60 4i4a_A Similar to unknown prot 99.4 3.5E-12 1.2E-16 94.6 10.9 75 78-160 33-107 (128)
61 1y9q_A Transcriptional regulat 99.4 2.6E-12 9E-17 102.2 10.3 77 76-161 101-179 (192)
62 1yhf_A Hypothetical protein SP 99.4 2.9E-12 1E-16 93.2 9.6 74 78-161 39-112 (115)
63 3cew_A Uncharacterized cupin p 99.4 2.7E-12 9.2E-17 95.2 9.3 79 77-162 24-103 (125)
64 3h7j_A Bacilysin biosynthesis 99.4 2.9E-12 9.8E-17 106.1 9.8 78 79-164 145-223 (243)
65 2o8q_A Hypothetical protein; c 99.3 4.2E-12 1.4E-16 95.2 9.7 77 79-162 43-119 (134)
66 1rc6_A Hypothetical protein YL 99.3 3.8E-12 1.3E-16 106.3 9.1 78 76-160 176-254 (261)
67 2ozj_A Cupin 2, conserved barr 99.3 1.3E-11 4.4E-16 90.0 9.9 72 79-160 38-109 (114)
68 1sef_A Conserved hypothetical 99.3 3.2E-11 1.1E-15 101.5 12.6 76 77-160 180-257 (274)
69 2q30_A Uncharacterized protein 99.3 2.3E-11 7.8E-16 87.4 9.0 75 78-160 32-107 (110)
70 1sfn_A Conserved hypothetical 99.3 6.1E-11 2.1E-15 98.4 12.4 77 76-160 162-239 (246)
71 1y3t_A Hypothetical protein YX 99.2 3.4E-11 1.2E-15 103.1 10.9 77 78-162 45-121 (337)
72 3lwc_A Uncharacterized protein 99.2 2E-11 6.7E-16 90.8 8.2 73 78-160 39-111 (119)
73 1sq4_A GLXB, glyoxylate-induce 99.2 1.8E-11 6.1E-16 103.6 8.6 76 77-160 66-143 (278)
74 4e2q_A Ureidoglycine aminohydr 99.2 2.3E-11 7.8E-16 102.4 8.9 106 36-160 37-142 (266)
75 3h7j_A Bacilysin biosynthesis 99.2 2.1E-11 7.3E-16 100.8 8.1 73 80-160 35-108 (243)
76 1rc6_A Hypothetical protein YL 99.2 2.7E-11 9.1E-16 101.2 8.2 76 78-160 58-134 (261)
77 2opk_A Hypothetical protein; p 99.2 9.6E-11 3.3E-15 85.9 9.7 74 78-160 30-109 (112)
78 1juh_A Quercetin 2,3-dioxygena 99.2 1.3E-10 4.4E-15 101.2 12.2 81 78-162 47-130 (350)
79 2i45_A Hypothetical protein; n 99.2 5.3E-11 1.8E-15 85.8 7.7 69 81-158 30-98 (107)
80 1y3t_A Hypothetical protein YX 99.2 3.5E-10 1.2E-14 96.7 13.6 74 81-162 219-293 (337)
81 1sef_A Conserved hypothetical 99.2 3.9E-11 1.3E-15 101.0 7.4 77 77-160 60-137 (274)
82 2d40_A Z3393, putative gentisa 99.2 4.8E-11 1.6E-15 104.2 8.0 76 78-160 99-174 (354)
83 2pyt_A Ethanolamine utilizatio 99.2 6.2E-11 2.1E-15 89.8 7.1 71 78-160 56-126 (133)
84 4b29_A Dimethylsulfoniopropion 99.1 1.3E-10 4.4E-15 94.6 9.0 78 76-161 129-206 (217)
85 3rns_A Cupin 2 conserved barre 99.1 1.2E-10 4.2E-15 95.4 9.0 73 78-159 152-224 (227)
86 1sq4_A GLXB, glyoxylate-induce 99.1 3.5E-10 1.2E-14 95.6 10.3 84 70-160 182-265 (278)
87 3d82_A Cupin 2, conserved barr 99.1 2.3E-10 7.9E-15 81.0 7.8 60 90-158 40-99 (102)
88 3rns_A Cupin 2 conserved barre 99.1 3.1E-10 1.1E-14 93.0 9.6 73 78-160 36-108 (227)
89 4e2q_A Ureidoglycine aminohydr 99.1 2.1E-09 7.1E-14 90.4 14.8 75 76-158 183-258 (266)
90 4h7l_A Uncharacterized protein 99.1 3.3E-10 1.1E-14 88.1 8.6 71 79-162 47-119 (157)
91 3bu7_A Gentisate 1,2-dioxygena 99.1 1.7E-09 6E-14 95.5 14.0 75 78-160 293-368 (394)
92 2d40_A Z3393, putative gentisa 99.1 1.1E-09 3.7E-14 95.6 11.5 89 59-159 249-338 (354)
93 3nw4_A Gentisate 1,2-dioxygena 99.1 3.9E-10 1.3E-14 98.8 8.6 77 77-160 101-177 (368)
94 3bu7_A Gentisate 1,2-dioxygena 99.1 1.2E-09 4.2E-14 96.5 11.9 78 76-160 120-198 (394)
95 4axo_A EUTQ, ethanolamine util 99.1 8.1E-10 2.8E-14 85.5 9.4 71 78-160 65-135 (151)
96 1vr3_A Acireductone dioxygenas 98.9 1.4E-08 4.7E-13 81.4 12.5 86 80-169 75-170 (191)
97 1sfn_A Conserved hypothetical 98.9 1.9E-09 6.4E-14 89.4 7.4 71 78-160 49-119 (246)
98 1o5u_A Novel thermotoga mariti 98.9 2.9E-09 9.8E-14 76.9 6.2 64 83-155 35-98 (101)
99 3ebr_A Uncharacterized RMLC-li 98.9 8.8E-09 3E-13 80.3 8.9 89 58-161 26-116 (159)
100 2q1z_B Anti-sigma factor CHRR, 98.8 9.3E-09 3.2E-13 82.6 7.4 70 79-160 125-194 (195)
101 3bcw_A Uncharacterized protein 98.8 5E-09 1.7E-13 78.3 5.0 67 78-152 48-114 (123)
102 1juh_A Quercetin 2,3-dioxygena 98.8 4.5E-08 1.5E-12 85.1 11.7 75 78-160 248-325 (350)
103 1yfu_A 3-hydroxyanthranilate-3 98.8 6.5E-08 2.2E-12 75.9 11.2 61 85-149 41-101 (174)
104 3cjx_A Protein of unknown func 98.8 1.7E-08 5.7E-13 79.2 7.2 88 60-161 29-118 (165)
105 2o1q_A Putative acetyl/propion 98.8 3.8E-09 1.3E-13 80.9 3.4 91 59-162 29-120 (145)
106 1dgw_Y Canavalin; duplicated s 98.7 9.5E-08 3.3E-12 67.9 10.1 72 125-201 6-81 (93)
107 1zrr_A E-2/E-2' protein; nicke 98.7 7E-09 2.4E-13 82.4 4.3 71 92-167 93-163 (179)
108 2y0o_A Probable D-lyxose ketol 98.7 3.8E-08 1.3E-12 77.8 8.3 83 79-163 53-155 (175)
109 3bal_A Acetylacetone-cleaving 98.7 1.3E-08 4.5E-13 78.8 5.3 107 39-161 14-121 (153)
110 3eqe_A Putative cystein deoxyg 98.7 2.6E-07 8.8E-12 72.8 12.9 86 78-164 68-156 (171)
111 3nw4_A Gentisate 1,2-dioxygena 98.6 7.7E-07 2.6E-11 77.9 13.1 72 78-159 278-349 (368)
112 3st7_A Capsular polysaccharide 98.5 4.5E-07 1.5E-11 78.0 10.6 77 81-160 274-354 (369)
113 1zvf_A 3-hydroxyanthranilate 3 98.5 8.2E-07 2.8E-11 69.6 10.8 62 86-148 41-103 (176)
114 2gm6_A Cysteine dioxygenase ty 98.5 1.6E-06 5.4E-11 70.3 12.9 83 78-161 78-167 (208)
115 2arc_A ARAC, arabinose operon 98.5 5.7E-07 1.9E-11 68.3 9.3 61 93-161 32-93 (164)
116 3d0j_A Uncharacterized protein 98.4 5.8E-07 2E-11 68.1 7.7 78 81-160 27-109 (140)
117 3o14_A Anti-ecfsigma factor, C 98.4 1.5E-06 5.1E-11 71.2 10.4 84 59-160 27-110 (223)
118 2qnk_A 3-hydroxyanthranilate 3 98.3 3.2E-06 1.1E-10 71.0 10.5 68 87-160 39-106 (286)
119 3eln_A Cysteine dioxygenase ty 98.3 1.7E-05 5.7E-10 63.9 13.4 88 78-165 69-163 (200)
120 3uss_A Putative uncharacterize 98.1 0.00012 4.2E-09 59.2 14.1 85 78-163 72-163 (211)
121 2pa7_A DTDP-6-deoxy-3,4-keto-h 98.0 0.00011 3.8E-09 55.9 12.0 95 60-160 17-113 (141)
122 3myx_A Uncharacterized protein 97.9 5.7E-05 2E-09 62.3 10.1 72 78-160 46-117 (238)
123 3es4_A Uncharacterized protein 97.8 5E-05 1.7E-09 56.0 6.9 61 80-148 43-103 (116)
124 3gbg_A TCP pilus virulence reg 97.7 0.00017 5.7E-09 59.5 9.5 74 79-158 7-84 (276)
125 3ejk_A DTDP sugar isomerase; Y 97.6 0.0004 1.4E-08 54.6 10.0 77 84-160 58-141 (174)
126 3myx_A Uncharacterized protein 97.5 0.00044 1.5E-08 56.9 9.4 63 78-148 166-228 (238)
127 1yud_A Hypothetical protein SO 97.4 0.0054 1.8E-07 47.9 13.7 131 57-199 26-164 (170)
128 2vec_A YHAK, pirin-like protei 97.3 0.0016 5.3E-08 54.2 9.6 73 81-159 66-141 (256)
129 3o14_A Anti-ecfsigma factor, C 97.2 0.0009 3.1E-08 54.5 7.5 78 59-157 133-210 (223)
130 3kmh_A D-lyxose isomerase; cup 97.0 0.0029 9.8E-08 51.8 8.8 80 78-157 105-205 (246)
131 1tq5_A Protein YHHW; bicupin, 96.9 0.0054 1.9E-07 50.5 9.8 74 81-160 43-119 (242)
132 1vrb_A Putative asparaginyl hy 96.7 0.02 6.8E-07 49.3 11.6 74 84-158 145-251 (342)
133 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 96.4 0.028 9.4E-07 44.4 10.2 73 87-160 56-136 (185)
134 3bb6_A Uncharacterized protein 96.4 0.024 8.3E-07 42.0 9.0 72 87-160 22-100 (127)
135 2ixk_A DTDP-4-dehydrorhamnose 96.3 0.034 1.2E-06 43.9 10.2 73 87-160 57-137 (184)
136 4gjz_A Lysine-specific demethy 96.3 0.012 4.1E-07 46.7 7.4 68 82-150 126-226 (235)
137 1dzr_A DTDP-4-dehydrorhamnose 96.2 0.049 1.7E-06 42.9 10.6 71 87-158 55-134 (183)
138 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 96.2 0.033 1.1E-06 44.4 9.3 72 87-160 68-143 (197)
139 1wlt_A 176AA long hypothetical 96.1 0.044 1.5E-06 43.6 9.8 71 86-157 72-151 (196)
140 3ryk_A DTDP-4-dehydrorhamnose 95.9 0.044 1.5E-06 43.9 9.0 69 87-156 78-155 (205)
141 1oi6_A PCZA361.16; epimerase, 95.8 0.088 3E-06 42.1 10.5 70 87-157 55-133 (205)
142 3d8c_A Hypoxia-inducible facto 95.8 0.043 1.5E-06 47.3 9.1 76 84-160 187-297 (349)
143 1e5r_A Proline oxidase; oxidor 95.7 0.011 3.8E-07 49.9 4.8 70 79-152 91-167 (290)
144 2qdr_A Uncharacterized protein 95.7 0.14 4.8E-06 42.5 11.1 73 78-162 90-163 (303)
145 2qnk_A 3-hydroxyanthranilate 3 95.5 0.058 2E-06 45.2 8.5 49 101-158 227-275 (286)
146 3al5_A HTYW5, JMJC domain-cont 95.5 0.071 2.4E-06 45.6 9.3 74 83-159 170-272 (338)
147 2p17_A Pirin-like protein; GK1 95.4 0.17 5.8E-06 42.2 11.1 72 81-159 42-115 (277)
148 4diq_A Lysine-specific demethy 95.3 0.18 6.2E-06 45.4 11.6 78 84-162 168-265 (489)
149 1upi_A DTDP-4-dehydrorhamnose 95.2 0.21 7.3E-06 40.5 10.9 70 87-157 74-152 (225)
150 2c0z_A NOVW; isomerase, epimer 95.2 0.15 5.2E-06 41.1 9.9 70 87-157 63-141 (216)
151 4hn1_A Putative 3-epimerase in 95.1 0.2 6.9E-06 40.0 10.2 69 87-156 52-129 (201)
152 1j1l_A Pirin; beta sandwich, c 95.1 0.21 7.3E-06 42.0 10.9 74 80-159 41-117 (290)
153 1eyb_A Homogentisate 1,2-dioxy 95.1 0.59 2E-05 41.7 14.0 105 41-158 118-227 (471)
154 2xdv_A MYC-induced nuclear ant 95.1 0.23 7.8E-06 44.2 11.6 65 84-149 143-223 (442)
155 2qjv_A Uncharacterized IOLB-li 94.9 0.23 7.8E-06 41.4 10.2 82 78-162 152-248 (270)
156 2oyz_A UPF0345 protein VPA0057 94.6 0.15 5.2E-06 35.7 7.1 65 85-159 29-93 (94)
157 3rcq_A Aspartyl/asparaginyl be 94.5 0.13 4.5E-06 40.9 7.5 77 80-164 103-184 (197)
158 1xru_A 4-deoxy-L-threo-5-hexos 94.1 0.83 2.8E-05 38.2 11.9 82 78-164 179-267 (282)
159 3hqx_A UPF0345 protein aciad03 93.7 0.29 1E-05 35.3 7.3 68 84-159 42-109 (111)
160 2yu1_A JMJC domain-containing 92.3 0.23 8E-06 44.3 6.3 65 87-151 204-292 (451)
161 1ywk_A 4-deoxy-L-threo-5-hexos 92.2 0.6 2.1E-05 39.2 8.4 82 78-163 179-266 (289)
162 3kv5_D JMJC domain-containing 91.6 0.28 9.7E-06 44.2 6.1 64 87-150 274-361 (488)
163 1pmi_A PMI, phosphomannose iso 91.5 0.6 2E-05 41.5 8.0 77 78-159 356-437 (440)
164 3dl3_A Tellurite resistance pr 90.8 1.4 4.8E-05 32.1 8.1 50 98-147 36-86 (119)
165 2rg4_A Uncharacterized protein 90.7 0.59 2E-05 37.3 6.6 79 80-160 104-204 (216)
166 3kv4_A PHD finger protein 8; e 90.7 0.62 2.1E-05 41.5 7.2 64 87-150 239-326 (447)
167 1j1l_A Pirin; beta sandwich, c 90.3 3.7 0.00013 34.3 11.4 78 77-161 167-244 (290)
168 3eo6_A Protein of unknown func 90.2 0.61 2.1E-05 33.3 5.5 55 85-147 42-96 (106)
169 1tq5_A Protein YHHW; bicupin, 90.2 1.5 5.2E-05 35.7 8.7 75 77-164 158-232 (242)
170 3k2o_A Bifunctional arginine d 90.2 0.51 1.7E-05 40.4 6.1 67 84-150 176-281 (336)
171 3m3i_A Putative uncharacterize 89.0 7.9 0.00027 31.2 13.1 135 57-200 33-210 (225)
172 2wfp_A Mannose-6-phosphate iso 88.6 0.76 2.6E-05 40.2 6.2 55 78-142 323-377 (394)
173 3kv9_A JMJC domain-containing 88.6 0.65 2.2E-05 40.7 5.7 66 84-149 179-269 (397)
174 2vec_A YHAK, pirin-like protei 88.4 3.4 0.00012 33.9 9.6 72 77-157 180-251 (256)
175 3loi_A Putative uncharacterize 88.4 7.3 0.00025 30.1 13.8 130 57-200 24-168 (172)
176 2ypd_A Probable JMJC domain-co 87.9 0.52 1.8E-05 41.1 4.5 38 125-162 293-330 (392)
177 1qwr_A Mannose-6-phosphate iso 87.9 0.7 2.4E-05 39.2 5.3 55 78-142 250-304 (319)
178 3pur_A Lysine-specific demethy 85.9 0.81 2.8E-05 41.5 4.8 62 87-148 304-389 (528)
179 1zx5_A Mannosephosphate isomer 85.1 2.7 9.3E-05 35.2 7.5 55 78-144 229-284 (300)
180 2pqq_A Putative transcriptiona 84.9 2.2 7.5E-05 30.2 6.0 52 82-135 29-80 (149)
181 2p17_A Pirin-like protein; GK1 84.5 3.4 0.00012 34.2 7.7 73 77-160 165-242 (277)
182 3mdp_A Cyclic nucleotide-bindi 84.3 2.1 7.3E-05 30.0 5.7 54 81-136 29-85 (142)
183 3k3o_A PHF8, PHD finger protei 83.8 1.1 3.8E-05 38.9 4.6 63 87-149 155-241 (371)
184 1zx5_A Mannosephosphate isomer 83.7 0.81 2.8E-05 38.5 3.6 47 100-146 117-179 (300)
185 2qjv_A Uncharacterized IOLB-li 82.8 12 0.00041 30.9 10.3 83 63-158 16-108 (270)
186 1qwr_A Mannose-6-phosphate iso 82.7 0.93 3.2E-05 38.4 3.6 47 100-146 117-179 (319)
187 3pua_A GRC5, PHD finger protei 81.7 1.5 5.1E-05 38.4 4.6 63 87-149 182-268 (392)
188 4ev0_A Transcription regulator 81.3 4.5 0.00015 30.7 6.9 118 82-203 23-187 (216)
189 3dn7_A Cyclic nucleotide bindi 80.5 4.5 0.00015 30.2 6.5 115 82-203 31-192 (194)
190 2z69_A DNR protein; beta barre 80.3 2.1 7E-05 30.6 4.4 53 81-135 35-87 (154)
191 2oz6_A Virulence factor regula 80.3 5 0.00017 30.2 6.8 53 82-136 14-66 (207)
192 3e97_A Transcriptional regulat 80.3 5.1 0.00018 30.8 7.0 54 81-136 29-82 (231)
193 3g7d_A PHPD; non heme Fe(II) d 80.1 28 0.00095 29.9 12.0 43 101-146 355-397 (443)
194 3iwz_A CAP-like, catabolite ac 80.0 5.3 0.00018 30.5 7.0 53 82-136 35-87 (230)
195 3d0s_A Transcriptional regulat 79.9 5.9 0.0002 30.3 7.2 115 83-203 31-201 (227)
196 3fx3_A Cyclic nucleotide-bindi 79.2 4.8 0.00017 31.1 6.5 52 82-135 35-86 (237)
197 3ryp_A Catabolite gene activat 78.8 6 0.00021 29.8 6.8 118 82-203 20-191 (210)
198 2wfp_A Mannose-6-phosphate iso 78.8 1.6 5.6E-05 38.1 3.9 24 124-147 239-262 (394)
199 3b02_A Transcriptional regulat 78.6 5 0.00017 30.1 6.3 36 100-136 17-52 (195)
200 3idb_B CAMP-dependent protein 78.5 5 0.00017 29.0 6.1 52 81-135 61-112 (161)
201 3gyd_A CNMP-BD protein, cyclic 78.4 4.6 0.00016 30.4 6.0 53 81-135 62-114 (187)
202 2gau_A Transcriptional regulat 78.2 4.5 0.00015 31.1 6.0 119 81-203 33-204 (232)
203 1zyb_A Transcription regulator 77.6 4.5 0.00015 31.4 5.9 119 81-203 43-210 (232)
204 3la7_A Global nitrogen regulat 77.3 6.8 0.00023 30.6 6.9 117 81-203 43-217 (243)
205 3dv8_A Transcriptional regulat 77.3 6.1 0.00021 30.0 6.5 118 82-203 27-193 (220)
206 1o5l_A Transcriptional regulat 76.3 5.9 0.0002 30.2 6.2 53 81-135 22-74 (213)
207 3kcc_A Catabolite gene activat 74.8 7.3 0.00025 30.9 6.5 118 82-203 70-241 (260)
208 3e6c_C CPRK, cyclic nucleotide 74.6 8.6 0.00029 30.0 6.9 118 82-203 33-201 (250)
209 1ywk_A 4-deoxy-L-threo-5-hexos 73.7 15 0.00051 30.7 8.2 67 84-157 62-131 (289)
210 1ft9_A Carbon monoxide oxidati 73.2 14 0.00048 28.1 7.7 115 82-203 24-187 (222)
211 1pmi_A PMI, phosphomannose iso 72.7 2.9 0.0001 37.0 3.9 23 125-147 266-288 (440)
212 2fmy_A COOA, carbon monoxide o 72.5 18 0.00062 27.4 8.2 113 82-203 28-191 (220)
213 3pna_A CAMP-dependent protein 71.8 9.2 0.00031 27.4 6.0 48 81-135 61-108 (154)
214 3ocp_A PRKG1 protein; serine/t 68.8 16 0.00056 25.4 6.7 47 82-135 47-93 (139)
215 4f8a_A Potassium voltage-gated 68.6 12 0.00042 26.5 6.1 49 82-137 51-99 (160)
216 2qcs_B CAMP-dependent protein 67.5 14 0.00048 29.3 6.7 54 81-135 180-233 (291)
217 2ptm_A Hyperpolarization-activ 65.7 11 0.00038 28.2 5.5 49 81-135 94-142 (198)
218 2zcw_A TTHA1359, transcription 65.2 14 0.00048 27.7 6.0 115 84-203 8-170 (202)
219 2bgc_A PRFA; bacterial infecti 64.9 13 0.00046 28.7 6.0 71 84-158 21-98 (238)
220 3bpz_A Potassium/sodium hyperp 64.3 8 0.00027 29.2 4.4 48 81-135 95-142 (202)
221 1znp_A Hypothetical protein AT 64.2 44 0.0015 25.2 12.9 103 57-166 19-128 (154)
222 1xsq_A Ureidoglycolate hydrola 63.3 17 0.00057 27.8 6.0 65 94-158 71-139 (168)
223 2bdr_A Ureidoglycolate hydrola 63.1 24 0.00082 27.1 6.9 66 93-158 72-141 (175)
224 4ava_A Lysine acetyltransferas 62.9 17 0.00057 29.7 6.4 51 82-135 37-87 (333)
225 2xxz_A Lysine-specific demethy 62.7 8.6 0.00029 32.8 4.6 27 125-151 279-305 (332)
226 3ukn_A Novel protein similar t 61.8 14 0.00048 28.0 5.5 49 81-136 98-146 (212)
227 1yll_A PA5104, conserved hypot 59.8 18 0.00062 28.4 5.8 34 101-140 141-174 (200)
228 3of1_A CAMP-dependent protein 59.0 11 0.00037 28.9 4.4 47 82-135 31-77 (246)
229 3dkw_A DNR protein; CRP-FNR, H 58.9 4.3 0.00015 31.0 2.0 118 82-203 33-202 (227)
230 2qcs_B CAMP-dependent protein 57.7 18 0.00063 28.6 5.7 48 81-135 62-109 (291)
231 1vp6_A CNBD, cyclic-nucleotide 57.3 12 0.0004 26.0 4.0 45 82-135 35-79 (138)
232 2d93_A RAP guanine nucleotide 56.9 10 0.00035 26.4 3.6 48 81-135 39-87 (134)
233 3shr_A CGMP-dependent protein 54.3 20 0.00069 28.6 5.4 52 82-135 181-233 (299)
234 3tnp_B CAMP-dependent protein 54.3 28 0.00094 29.9 6.6 52 81-135 168-219 (416)
235 3shr_A CGMP-dependent protein 52.8 28 0.00094 27.8 6.0 49 81-136 62-110 (299)
236 1s4c_A Protein HI0227; double- 52.5 44 0.0015 24.7 6.7 56 92-147 60-134 (155)
237 1o7f_A CAMP-dependent RAP1 gua 50.3 32 0.0011 29.4 6.4 56 81-137 65-121 (469)
238 3avr_A Lysine-specific demethy 49.8 17 0.0006 32.9 4.6 27 125-151 338-364 (531)
239 1xru_A 4-deoxy-L-threo-5-hexos 49.6 37 0.0012 28.2 6.2 50 101-157 79-131 (282)
240 3of1_A CAMP-dependent protein 49.2 30 0.001 26.3 5.5 48 82-135 149-196 (246)
241 4ask_A Lysine-specific demethy 47.6 20 0.00069 32.2 4.6 80 68-151 228-339 (510)
242 4din_B CAMP-dependent protein 46.0 39 0.0013 28.4 6.1 51 84-135 274-324 (381)
243 4din_B CAMP-dependent protein 37.9 25 0.00087 29.6 3.7 48 81-135 153-200 (381)
244 3dkq_A PKHD-type hydroxylase S 37.3 38 0.0013 27.2 4.4 75 80-159 100-194 (243)
245 1o7f_A CAMP-dependent RAP1 gua 36.6 58 0.002 27.7 5.8 46 84-135 364-409 (469)
246 3tnp_B CAMP-dependent protein 35.5 48 0.0016 28.3 5.1 53 81-135 290-348 (416)
247 1xe7_A YML079WP, hypothetical 35.4 1.6E+02 0.0055 23.1 11.8 108 80-200 80-198 (203)
248 1wgp_A Probable cyclic nucleot 33.8 12 0.00041 25.9 0.8 33 100-135 47-82 (137)
249 3g7d_A PHPD; non heme Fe(II) d 32.6 73 0.0025 27.4 5.5 74 125-199 155-263 (443)
250 4f7z_A RAP guanine nucleotide 30.4 89 0.003 29.9 6.5 56 80-136 64-120 (999)
251 3nnf_A CURA; non-HAEM Fe(II)/a 29.7 53 0.0018 27.8 4.1 22 125-146 234-255 (344)
252 1wy3_A Villin; structural prot 28.9 36 0.0012 19.0 2.1 21 180-200 1-21 (35)
253 1und_A Advillin, P92; actin bi 26.7 41 0.0014 19.0 2.1 21 180-200 3-23 (37)
254 1iyc_A Scarabaecin; antifungal 26.4 10 0.00035 20.7 -0.5 10 27-36 23-32 (36)
255 1tc3_C Protein (TC3 transposas 24.7 80 0.0027 17.0 3.3 25 179-203 21-45 (51)
256 2a1x_A Phytanoyl-COA dioxygena 24.6 79 0.0027 25.5 4.4 26 125-150 216-242 (308)
257 3cf6_E RAP guanine nucleotide 23.6 1.1E+02 0.0038 28.3 5.6 47 83-135 58-104 (694)
258 2opw_A Phyhd1 protein; double- 23.5 62 0.0021 25.8 3.5 27 124-150 227-254 (291)
259 2qdr_A Uncharacterized protein 23.1 1.6E+02 0.0055 24.3 5.7 67 78-164 216-290 (303)
260 4f7z_A RAP guanine nucleotide 23.0 83 0.0028 30.1 4.7 31 100-135 379-409 (999)
261 2dkz_A Hypothetical protein LO 22.2 82 0.0028 21.2 3.2 28 171-201 47-74 (84)
262 2fct_A Syringomycin biosynthes 21.7 87 0.003 25.3 4.0 25 124-148 219-244 (313)
263 3dxt_A JMJC domain-containing 20.2 1.2E+02 0.0041 25.9 4.6 32 125-156 262-293 (354)
No 1
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=100.00 E-value=1.7e-49 Score=323.10 Aligned_cols=194 Identities=45% Similarity=0.796 Sum_probs=181.4
Q ss_pred CCCCCCcceeeccCCCC-cccCCcccCCCCCCCCCCcEEec-cCCCCCCCCCCCceEEEEeccccCCCCCceEEEEEEEE
Q 048039 9 ADSNNILDFCVADIYSH-VFVNGAPCKDPKTAHADDFYFTG-LDKQGNFSNPMGSKATPVYVQQIPGLNTLGLSMVRVDF 86 (204)
Q Consensus 9 ~d~~~~~d~cv~~~~~~-~~~~g~~ck~~~~~~~~df~~~~-~~~~~~~~~~~g~~~~~~~~~~~P~l~~~g~s~~~~~i 86 (204)
+||||||||||||+.++ +++|||+|| |+.++++||+|++ +.+++++.+..|+.++.++...+|++++.++++.++++
T Consensus 1 ~~~~~~~d~c~~~~~~~~~~~~g~~c~-~~~~~~~df~~~~~~~~~~~~~~~~G~~v~~~~~~~~p~l~~~~~~~~~~~l 79 (201)
T 1fi2_A 1 TDPDPLQDFCVADLDGKAVSVNGHTCK-PMSEAGDDFLFSSKLTKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDF 79 (201)
T ss_dssp CCCCCSSSCCCBCCCTTSCCCSSCCBC-CGGGCCSCTTCCCTTSSCCCCCSTTSEEEEEESTTTCGGGTTSSCEEEEEEE
T ss_pred CCCcccceeEEecCCCCcccccCcccc-cCcccccceEEeeeecCCCCccCCCCcEEEEEecccCCCcccCceEEEEEEE
Confidence 59999999999999998 999999999 9999999999999 99999888899999999999999999999999999999
Q ss_pred CCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCC-CCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEEEEcCCCCC
Q 048039 87 APDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAP-DYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIAALNSQNPG 165 (204)
Q Consensus 87 ~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~-~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~~~~s~~pg 165 (204)
.||+..++|||+++.|++||++|++++++.+.++ +++...+.|++||+++||+|.+|++.|.|++++++++++++++|+
T Consensus 80 ~pg~~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~~~~~~~~~~~l~~GD~~~iP~g~~H~~~N~g~~~~~~l~v~~~~~p~ 159 (201)
T 1fi2_A 80 APGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQNPG 159 (201)
T ss_dssp CTTCEEEEEECTTCCEEEEEEESEEEEEEECCGGGTTCEEEEEEETTCEEEECTTCCEEEEECSSSCEEEEEEESSSCCC
T ss_pred CCCCCCCCeECCCCCEEEEEEeCEEEEEEEcCCCCCCeEEEEEECCCCEEEECCCCeEEEEeCCCCCEEEEEEECCCCCC
Confidence 9999999999998789999999999999975310 023348999999999999999999999999999999999999999
Q ss_pred ceecccccccCCCCCCHHHHHHhcCCCHHHHHHHHhcC
Q 048039 166 TSSIAPALFTSKPVLNDEIISKTFLFDKKNVAILRSKF 203 (204)
Q Consensus 166 ~~~~~~~~f~~~p~~~~~vl~~~f~~~~~~v~~l~~~~ 203 (204)
.+.++.++|+++|++++++|+++|+++++++++|+++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~vl~~af~~~~~~v~~l~~~~ 197 (201)
T 1fi2_A 160 IVFVPLTLFGSDPPIPTPVLTKALRVEAGVVELLKSKF 197 (201)
T ss_dssp CEEHHHHHHHCSSCCCHHHHHHHHTSCHHHHHHHHHHS
T ss_pred eEehhhHHhcCCCCCCHHHHHHHHCcCHHHHHHHHHhh
Confidence 99999999999889999999999999999999999987
No 2
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=99.96 E-value=6.2e-30 Score=230.04 Aligned_cols=154 Identities=16% Similarity=0.207 Sum_probs=138.9
Q ss_pred cEEeccC-CCCCCCCCCCceEEEEeccccCCCCCceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCC
Q 048039 44 FYFTGLD-KQGNFSNPMGSKATPVYVQQIPGLNTLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDY 122 (204)
Q Consensus 44 f~~~~~~-~~~~~~~~~g~~~~~~~~~~~P~l~~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~ 122 (204)
+.++... ...+..++.|++++.+++.+||+|+++++++++++|.||++.+||||++|.|++||++|+++++++++++ +
T Consensus 287 ~~~Ni~~p~~~d~~~~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g-~ 365 (466)
T 3kgl_A 287 CTDNLDDPSNADVYKPQLGYISTLNSYDLPILRFLRLSALRGSIRQNAMVLPQWNANANAVLYVTDGEAHVQVVNDNG-D 365 (466)
T ss_dssp CEEETTCGGGEEEEETTTEEEEEECTTTCTTHHHHTCEEEEEEEETTEEEEEEEESSCCEEEEEEESEEEEEEECTTS-C
T ss_pred ccccccCcccCCcccCCCceEEEechhhCcccccCceeeEEEEeecCcEeeeeECCCCCEEEEEEeceEEEEEEeCCC-c
Confidence 4555543 3445557889999999999999999999999999999999999999999999999999999999998864 4
Q ss_pred ceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEEEEcCCCCCceecc--cccccCCCCCCHHHHHHhcCCCHHHHHHHH
Q 048039 123 RHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIAALNSQNPGTSSIA--PALFTSKPVLNDEIISKTFLFDKKNVAILR 200 (204)
Q Consensus 123 ~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~~~~s~~pg~~~~~--~~~f~~~p~~~~~vl~~~f~~~~~~v~~l~ 200 (204)
+++..+|++||+++||+|++|++ |.|++++.+++++++++|+.+.++ .++|++ +|++||+++|+++.+++++|+
T Consensus 366 ~~f~~~l~~GDV~v~P~G~~H~~-~ag~e~~~~l~~f~s~np~~~~LaG~~s~~~~---lP~eVla~aF~v~~~~v~~Lk 441 (466)
T 3kgl_A 366 RVFDGQVSQGQLLSIPQGFSVVK-RATSEQFRWIEFKTNANAQINTLAGRTSVLRG---LPLEVISNGYQISLEEARRVK 441 (466)
T ss_dssp EEEEEEEETTCEEEECTTCEEEE-EECSSEEEEEEEESSSSCCEEESSSTTCTGGG---SCHHHHHHHHTCCHHHHHHHH
T ss_pred EEEEeEecCCcEEEECCCCeEEE-EcCCCCEEEEEEECCCCCccccccchhhhhhh---CCHHHHHHHhCcCHHHHHHHH
Confidence 56788899999999999999998 778999999999999999999988 688886 999999999999999999998
Q ss_pred hc
Q 048039 201 SK 202 (204)
Q Consensus 201 ~~ 202 (204)
+.
T Consensus 442 ~~ 443 (466)
T 3kgl_A 442 FN 443 (466)
T ss_dssp HS
T ss_pred hc
Confidence 74
No 3
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=99.96 E-value=5e-29 Score=225.67 Aligned_cols=157 Identities=17% Similarity=0.243 Sum_probs=139.9
Q ss_pred CCCcEEeccC-CCCCCCCCCCceEEEEeccccCCCCCceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecC
Q 048039 41 ADDFYFTGLD-KQGNFSNPMGSKATPVYVQQIPGLNTLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTA 119 (204)
Q Consensus 41 ~~df~~~~~~-~~~~~~~~~g~~~~~~~~~~~P~l~~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~ 119 (204)
+..+.++..+ ...++.++.|++++.+++.+||+|+++++++++++|.||++.+||||++|.|++||++|++++++++++
T Consensus 319 ~~~l~~Ni~~p~~~di~~~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~ 398 (496)
T 3ksc_A 319 TAKLRLNIGPSSSPDIYNPEAGRIKTVTSLDLPVLRWLKLSAEHGSLHKNAMFVPHYNLNANSIIYALKGRARLQVVNCN 398 (496)
T ss_dssp SSCCEEECSTTSCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTT
T ss_pred chhhhccccccccCCcccCCCeeEEEeCHHHCccccccceeEEEEEeeCCeEECCeeCCCCCEEEEEEeceEEEEEEeCC
Confidence 4556676653 445556788999999999999999999999999999999999999999999999999999999999876
Q ss_pred CCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEEEEcCCCCCceecc--cccccCCCCCCHHHHHHhcCCCHHHHH
Q 048039 120 PDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIAALNSQNPGTSSIA--PALFTSKPVLNDEIISKTFLFDKKNVA 197 (204)
Q Consensus 120 ~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~~~~s~~pg~~~~~--~~~f~~~p~~~~~vl~~~f~~~~~~v~ 197 (204)
+ ++++..+|++||+++||+|++|++.|. ++++.+++++++++|+...++ .++|+. +|++||+++|+++.++++
T Consensus 399 g-~~~f~~~l~~GDV~v~P~G~~H~~~a~-~e~~~~l~f~~s~np~~~~LaG~~sv~~~---~p~eVLa~aF~v~~~~v~ 473 (496)
T 3ksc_A 399 G-NTVFDGELEAGRALTVPQNYAVAAKSL-SDRFSYVAFKTNDRAGIARLAGTSSVINN---LPLDVVAATFNLQRNEAR 473 (496)
T ss_dssp S-CEEEEEEEETTCEEEECTTCEEEEEEC-SSEEEEEEEESSTTCCEEESSSTTCTTTT---SCHHHHHHHHTCCHHHHH
T ss_pred C-cEEEEEEecCCeEEEECCCCEEEEEeC-CCCEEEEEEECCCCCccccccchhhhhhh---CCHHHHHHHHCcCHHHHH
Confidence 4 455677899999999999999998774 788999999999999999887 688885 999999999999999999
Q ss_pred HHHhc
Q 048039 198 ILRSK 202 (204)
Q Consensus 198 ~l~~~ 202 (204)
+|++.
T Consensus 474 ~Lk~~ 478 (496)
T 3ksc_A 474 QLKSN 478 (496)
T ss_dssp HHHHS
T ss_pred HHHhc
Confidence 99873
No 4
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=99.96 E-value=3.7e-29 Score=224.94 Aligned_cols=155 Identities=18% Similarity=0.224 Sum_probs=138.9
Q ss_pred CcEEeccC-CCCCCCCCCCceEEEEeccccCCCCCceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCC
Q 048039 43 DFYFTGLD-KQGNFSNPMGSKATPVYVQQIPGLNTLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPD 121 (204)
Q Consensus 43 df~~~~~~-~~~~~~~~~g~~~~~~~~~~~P~l~~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~ 121 (204)
.+.++... ..+++.++.|++++.++..+||+|+++++++++++|.||++.+||||++|.|++||++|+++++++++++
T Consensus 286 ~l~~ni~~p~~~dv~~~~gG~v~~~~~~~fP~L~~lgiS~a~v~l~pGgm~~PHwHp~A~Ei~yV~~G~~~v~vV~~~g- 364 (465)
T 3qac_A 286 RLAVNVDDPSKADVYTPEAGRLTTVNSFNLPILRHLRLSAAKGVLYRNAMMAPHYNLNAHNIMYCVRGRGRIQIVNDQG- 364 (465)
T ss_dssp CCEEETTCTTTCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTS-
T ss_pred eccccccccccCCcccCCCceEEEeCHHHCCCccccceeEEEEEecCCcEeeeEECCCCCEEEEEEeCCEEEEEEeCCC-
Confidence 34444432 4556678899999999999999999999999999999999999999999999999999999999998864
Q ss_pred CceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEEEEcCCCCCceecc--cccccCCCCCCHHHHHHhcCCCHHHHHHH
Q 048039 122 YRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIAALNSQNPGTSSIA--PALFTSKPVLNDEIISKTFLFDKKNVAIL 199 (204)
Q Consensus 122 ~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~~~~s~~pg~~~~~--~~~f~~~p~~~~~vl~~~f~~~~~~v~~l 199 (204)
++++..+|++||+++||+|.+|++. .|++++.+++++++++|+.+.++ .++|+. ||++||+++|+++.+++++|
T Consensus 365 ~~~f~~~l~~GDVfvvP~g~~h~~~-ag~e~~~~l~f~~s~np~~~~LaG~~sv~~~---ip~eVla~aF~v~~e~v~~L 440 (465)
T 3qac_A 365 QSVFDEELSRGQLVVVPQNFAIVKQ-AFEDGFEWVSFKTSENAMFQSLAGRTSAIRS---LPIDVVSNIYQISREEAFGL 440 (465)
T ss_dssp CEEEEEEEETTCEEEECTTCEEEEE-EEEEEEEEEEEESSTTCCEEESSSSSBHHHH---SCHHHHHHHHTCCHHHHHHH
T ss_pred cEEEEEEecCCeEEEECCCcEEEEE-cCCCCeEEEEEecCCCCcccccccchhhhhh---CCHHHHHHHhCCCHHHHHHH
Confidence 5567788999999999999999986 57889999999999999999987 788886 99999999999999999999
Q ss_pred Hhc
Q 048039 200 RSK 202 (204)
Q Consensus 200 ~~~ 202 (204)
++.
T Consensus 441 k~~ 443 (465)
T 3qac_A 441 KFN 443 (465)
T ss_dssp HHS
T ss_pred Hhc
Confidence 874
No 5
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.95 E-value=1.4e-28 Score=221.64 Aligned_cols=147 Identities=18% Similarity=0.253 Sum_probs=135.4
Q ss_pred CCCCCCCCCCceEEEEeccccCCCCCceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeC
Q 048039 51 KQGNFSNPMGSKATPVYVQQIPGLNTLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILN 130 (204)
Q Consensus 51 ~~~~~~~~~g~~~~~~~~~~~P~l~~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~ 130 (204)
..+++.++.|++++.++..++|+|+++++++++++|.||++.+||||+++.|++||++|+++++++++++ ++.+..+|+
T Consensus 294 ~~~~~~~~~gG~v~~~~~~~fP~L~~l~iS~a~v~l~pG~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~~~g-~~~~~~~l~ 372 (459)
T 2e9q_A 294 ERADVFNPRGGRISTANYHTLPILRQVRLSAERGVLYSNAMVAPHYTVNSHSVMYATRGNARVQVVDNFG-QSVFDGEVR 372 (459)
T ss_dssp SCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTS-CEEEEEEEE
T ss_pred ccCCcccCCCeeEEEeccccCccccccccceEEEEeeCCcCccceECCCCCEEEEEEeeEEEEEEEeCCC-CEEEeeEEe
Confidence 4455557889999999999999999999999999999999999999999999999999999999998764 455566799
Q ss_pred CCcEEEECCCCeEEEEeCCCCCEEEEEEEcCCCCCceecc--cccccCCCCCCHHHHHHhcCCCHHHHHHHHhc
Q 048039 131 KGDVFVFPMGLLHYQRNVGKVNAVAIAALNSQNPGTSSIA--PALFTSKPVLNDEIISKTFLFDKKNVAILRSK 202 (204)
Q Consensus 131 ~Gd~~~~p~g~~H~~~N~g~~~a~~i~~~~s~~pg~~~~~--~~~f~~~p~~~~~vl~~~f~~~~~~v~~l~~~ 202 (204)
+||+++||+|.+|++.| +++++.+++++++++|+...++ .++|++ +|++||+++|+++++++++|++.
T Consensus 373 ~GDv~v~P~G~~H~~~n-g~~~~~~l~~~~s~~~~~~~laG~~s~~~~---~p~~Vla~af~v~~~~v~~l~~~ 442 (459)
T 2e9q_A 373 EGQVLMIPQNFVVIKRA-SDRGFEWIAFKTNDNAITNLLAGRVSQMRM---LPLGVLSNMYRISREEAQRLKYG 442 (459)
T ss_dssp TTCEEEECTTCEEEEEE-EEEEEEEEEEESSSSCCEEESSSSSSHHHH---SCHHHHHHHHTCCHHHHHHHHHS
T ss_pred CCcEEEECCCCEEEEEe-CCCCeEEEEEecCCCCcceeecchhHHHHh---CCHHHHHHHHCcCHHHHHHHHhc
Confidence 99999999999999999 7889999999999999999998 788986 99999999999999999999875
No 6
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=99.95 E-value=1.5e-28 Score=222.70 Aligned_cols=157 Identities=17% Similarity=0.270 Sum_probs=138.0
Q ss_pred CCCcEEeccC-CCCCCCCCCCceEEEEeccccCCCCCceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecC
Q 048039 41 ADDFYFTGLD-KQGNFSNPMGSKATPVYVQQIPGLNTLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTA 119 (204)
Q Consensus 41 ~~df~~~~~~-~~~~~~~~~g~~~~~~~~~~~P~l~~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~ 119 (204)
...+.++..+ ..+++.++.|++++.++..+||+|+++++++++++|.||++.+||||+++.|++||++|++++++++++
T Consensus 355 ~~rl~~Ni~~ps~~d~~n~~GG~v~~a~~~~fP~L~~LgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~ 434 (531)
T 3fz3_A 355 SLRLKENIGNPERADIFSPRAGRISTLNSHNLPILRFLRLSAERGFFYRNGIYSPHWNVNAHSVVYVIRGNARVQVVNEN 434 (531)
T ss_dssp GCCCEEECCCGGGCSEEETTTEEEEEESTTTCTHHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTT
T ss_pred cceeeeccCCcccCCcccCCCeEEEEeccccCCccccCceeEEEEEeecCccccceEcCCCCEEEEEEeCcEEEEEEeCC
Confidence 4556777652 445667899999999999999999999999999999999999999999999999999999999999876
Q ss_pred CCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEEEEcCCCCCceecc--cccccCCCCCCHHHHHHhcCCCHHHHH
Q 048039 120 PDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIAALNSQNPGTSSIA--PALFTSKPVLNDEIISKTFLFDKKNVA 197 (204)
Q Consensus 120 ~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~~~~s~~pg~~~~~--~~~f~~~p~~~~~vl~~~f~~~~~~v~ 197 (204)
+ ++++..+|++||+++||+|++|+.. .+++.+.++++.++++|++..++ .++|++ +|++||+++|+++.++++
T Consensus 435 G-~~v~~~~L~~GDV~v~P~G~~H~~~-ag~e~l~flaF~ss~np~~~~LaG~~svf~~---lP~eVLa~aF~v~~e~v~ 509 (531)
T 3fz3_A 435 G-DAILDQEVQQGQLFIVPQNHGVIQQ-AGNQGFEYFAFKTEENAFINTLAGRTSFLRA---LPDEVLANAYQISREQAR 509 (531)
T ss_dssp S-CEEEEEEEETTCEEEECTTCEEEEE-EEEEEEEEEEEESSTTCCEEESSSTTCHHHH---SCHHHHHHHHTCCHHHHH
T ss_pred C-cEEEEEEecCCeEEEECCCCeEEEe-cCCCCEEEEEEecCCCCcceeccchhHHHHh---CCHHHHHHHhCcCHHHHH
Confidence 4 4567899999999999999999765 46677777755566999999998 788987 999999999999999999
Q ss_pred HHHhc
Q 048039 198 ILRSK 202 (204)
Q Consensus 198 ~l~~~ 202 (204)
+|++.
T Consensus 510 kLk~~ 514 (531)
T 3fz3_A 510 QLKYN 514 (531)
T ss_dssp HHHHS
T ss_pred HHHhc
Confidence 99875
No 7
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.95 E-value=3.5e-27 Score=213.46 Aligned_cols=155 Identities=19% Similarity=0.271 Sum_probs=137.3
Q ss_pred cEEeccC-CCCCCCCCCCceEEEEeccccCCCCCceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCC
Q 048039 44 FYFTGLD-KQGNFSNPMGSKATPVYVQQIPGLNTLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDY 122 (204)
Q Consensus 44 f~~~~~~-~~~~~~~~~g~~~~~~~~~~~P~l~~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~ 122 (204)
+.++... ..+++.++.|++++.++..++|+|++++++++++++.||++.+||||+++.|++||++|++++++++++| +
T Consensus 302 l~~ni~~~~~~~~~~~~gG~v~~~~~~~~P~L~~l~is~~~v~l~pGa~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~G-~ 380 (476)
T 1fxz_A 302 LRHNIGQTSSPDIYNPQAGSVTTATSLDFPALSWLRLSAEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCNG-E 380 (476)
T ss_dssp CEEECSSSSCCSEEETTTEEEEEECTTTSGGGTTTTCCEEEEEECTTCEEEEEEETTCCEEEEEEESEEEEEEECTTS-C
T ss_pred eeccccccccCCcccCCCeEEEEeccccCcccccCcceEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEecCC-C
Confidence 4444332 4445567899999999999999999999999999999999999999999999999999999999997653 3
Q ss_pred ceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEEEEcCCCCCceecc--cccccCCCCCCHHHHHHhcCCCHHHHHHHH
Q 048039 123 RHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIAALNSQNPGTSSIA--PALFTSKPVLNDEIISKTFLFDKKNVAILR 200 (204)
Q Consensus 123 ~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~~~~s~~pg~~~~~--~~~f~~~p~~~~~vl~~~f~~~~~~v~~l~ 200 (204)
+.....|++||+++||+|.+|++.| +++.+.+++++.+++|+...++ .++|++ +|++||+++|+++++++++|+
T Consensus 381 ~~~~~~l~~GDv~viP~G~~H~~~n-g~~~l~~l~f~~s~~p~~~~laG~~s~~~~---~p~~Vla~af~~~~~~v~~l~ 456 (476)
T 1fxz_A 381 RVFDGELQEGRVLIVPQNFVVAARS-QSDNFEYVSFKTNDTPMIGTLAGANSLLNA---LPEEVIQHTFNLKSQQARQIK 456 (476)
T ss_dssp EEEEEEEETTCEEEECTTCEEEEEE-CSTTEEEEEEESSSSCCEEESSSTTCTGGG---SCHHHHHHHHTCCHHHHHHHH
T ss_pred EEeeeEEcCCCEEEECCCCeEEEEe-CCCCEEEEEEECCCCCceeEccchhHHHHh---CCHHHHHHHhCcCHHHHHHHH
Confidence 4445679999999999999999999 8889999999888999999998 899997 999999999999999999999
Q ss_pred hcC
Q 048039 201 SKF 203 (204)
Q Consensus 201 ~~~ 203 (204)
+.+
T Consensus 457 ~~~ 459 (476)
T 1fxz_A 457 NNN 459 (476)
T ss_dssp HSC
T ss_pred hhC
Confidence 764
No 8
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=99.95 E-value=2.3e-27 Score=215.61 Aligned_cols=148 Identities=19% Similarity=0.291 Sum_probs=134.8
Q ss_pred CCCCCCCCCCceEEEEeccccCCCCCceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeC
Q 048039 51 KQGNFSNPMGSKATPVYVQQIPGLNTLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILN 130 (204)
Q Consensus 51 ~~~~~~~~~g~~~~~~~~~~~P~l~~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~ 130 (204)
..+++.++.|++++.++..++|+|++++++++++++.||++.+||||+++.|++||++|++++++++++| ++.....|+
T Consensus 344 ~~~~~~~~~gG~v~~~~~~~fP~L~~l~is~a~v~L~PG~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G-~~~~~~~l~ 422 (510)
T 3c3v_A 344 RSPDIYNPQAGSLKTANELNLLILRWLGLSAEYGNLYRNALFVPHYNTNAHSIIYALRGRAHVQVVDSNG-NRVYDEELQ 422 (510)
T ss_dssp SCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTS-CEEEEEEEE
T ss_pred ccCCcccCCCeEEEEeccccCcccccceEEEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEeCCC-CEEEeEEEc
Confidence 4455668899999999999999999999999999999999999999999999999999999999998653 344566799
Q ss_pred CCcEEEECCCCeEEEEeCCCCCEEEEEEEcCCCCCceecc--cccccCCCCCCHHHHHHhcCCCHHHHHHHHhcC
Q 048039 131 KGDVFVFPMGLLHYQRNVGKVNAVAIAALNSQNPGTSSIA--PALFTSKPVLNDEIISKTFLFDKKNVAILRSKF 203 (204)
Q Consensus 131 ~Gd~~~~p~g~~H~~~N~g~~~a~~i~~~~s~~pg~~~~~--~~~f~~~p~~~~~vl~~~f~~~~~~v~~l~~~~ 203 (204)
+||+++||+|.+|++.| +++.+.+++++.+++|+...++ .++|++ +|++||+++|+++.+++++|++.+
T Consensus 423 ~GDv~viP~G~~H~~~N-g~e~l~~l~f~~s~~p~~~~LaG~~svf~~---lp~eVla~aF~v~~e~v~~L~~~~ 493 (510)
T 3c3v_A 423 EGHVLVVPQNFAVAGKS-QSDNFEYVAFKTDSRPSIANLAGENSVIDN---LPEEVVANSYGLPREQARQLKNNN 493 (510)
T ss_dssp TTCEEEECTTCEEEEEE-CSSEEEEEEEESSSSCCEEESSSTTSTTTT---SCHHHHHHHHTCCHHHHHHHHHSC
T ss_pred CCcEEEECCCCeEEEEe-CCCCEEEEEEECCCCcceeecccHhHHHHh---CCHHHHHHHHCcCHHHHHHHHhhC
Confidence 99999999999999999 8888999998888899999998 889986 999999999999999999999764
No 9
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.94 E-value=2.8e-27 Score=214.84 Aligned_cols=155 Identities=19% Similarity=0.322 Sum_probs=138.2
Q ss_pred CCcEEeccC-CCCCCCCCCCceEEEEeccccCCCCCceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCC
Q 048039 42 DDFYFTGLD-KQGNFSNPMGSKATPVYVQQIPGLNTLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAP 120 (204)
Q Consensus 42 ~df~~~~~~-~~~~~~~~~g~~~~~~~~~~~P~l~~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~ 120 (204)
..+.++... .++++.++.|++++.++..++|+|++++++++++++.||++.+||||+++.|++||++|+++++++++++
T Consensus 329 ~~l~~ni~~~~~~~~~~~~gG~v~~~~~~~~P~L~~lgls~a~v~l~pG~~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~g 408 (493)
T 2d5f_A 329 MKLHENIARPSRADFYNPKAGRISTLNSLTLPALRQFGLSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNAQG 408 (493)
T ss_dssp CCCEEECCCGGGCSEEETTTEEEEEESTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTS
T ss_pred eeeeecccccCCCCcccCCCeEEEEeccccCccccccceEEEEEEccCCceeeeeECCCCCEEEEEEeceEEEEEEcCCC
Confidence 345555543 5667778999999999999999999999999999999999999999999999999999999999997653
Q ss_pred CCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEEEEcCCCCCceecccccccCCCCCCHHHHHHhcCCCHHHHHHHH
Q 048039 121 DYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIAALNSQNPGTSSIAPALFTSKPVLNDEIISKTFLFDKKNVAILR 200 (204)
Q Consensus 121 ~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~~~~s~~pg~~~~~~~~f~~~p~~~~~vl~~~f~~~~~~v~~l~ 200 (204)
++.....|++||+++||+|.+|++.| +++++.+++++++++|+.+.+ .++|++ +|++||+++|+++.+++++|+
T Consensus 409 -~~~~~~~l~~GDv~vvP~G~~H~~~n-~~e~~~~l~~~ts~~p~~~~l-~s~~~~---~p~eVla~aF~v~~~~v~~l~ 482 (493)
T 2d5f_A 409 -NAVFDGELRRGQLLVVPQNFVVAEQG-GEQGLEYVVFKTHHNAVSSYI-KDVFRA---IPSEVLSNSYNLGQSQVRQLK 482 (493)
T ss_dssp -CEEEEEEEETTCEEEECTTCEEEEEE-EEEEEEEEEEESSTTCCEEEH-HHHHHH---SCHHHHHHHHTCCHHHHHHHH
T ss_pred -CEEEeEEEcCCCEEEECCCCeEeeee-CCCCEEEEEEECCCCCcceeH-HHHHHh---CCHHHHHHHHCcCHHHHHHHH
Confidence 34345679999999999999999998 558899999999999999999 889997 999999999999999999998
Q ss_pred hc
Q 048039 201 SK 202 (204)
Q Consensus 201 ~~ 202 (204)
+.
T Consensus 483 ~~ 484 (493)
T 2d5f_A 483 YQ 484 (493)
T ss_dssp HS
T ss_pred hc
Confidence 75
No 10
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=99.94 E-value=1.5e-26 Score=207.94 Aligned_cols=157 Identities=18% Similarity=0.243 Sum_probs=135.1
Q ss_pred CCCCcEEeccCCCCCCCCCCCceEEEEeccccCCCCCceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecC
Q 048039 40 HADDFYFTGLDKQGNFSNPMGSKATPVYVQQIPGLNTLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTA 119 (204)
Q Consensus 40 ~~~df~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~ 119 (204)
....++|+++.+++.+ ++.|++++.++..++|+|++++++++++++.||++.+||||+++.|++||++|++++++++++
T Consensus 243 ~~~~~~~~l~~~~p~~-~~~~G~v~~~~~~~fP~L~~l~is~~~v~l~pg~m~~PH~hp~A~ei~~V~~G~~~v~vv~~~ 321 (445)
T 2cav_A 243 SSQDKPFNLRSRDPIY-SNNYGKLYEITPEKNSQLRDLDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGLE 321 (445)
T ss_dssp ---CCCEETTSSCCSE-ESSSEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEC-
T ss_pred CCcccceeccccCCCc-cCCCceEEEeChHHCcccccCCCceEEEEeeCCceeeeEECCCCcEEEEEEeeEEEEEEEeCC
Confidence 3456788988887765 466779999999999999999999999999999999999999999999999999999999875
Q ss_pred CC-------Cc--eeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEEEE-cCCCCCceecc---cccccCCCCCCHHHHH
Q 048039 120 PD-------YR--HFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIAAL-NSQNPGTSSIA---PALFTSKPVLNDEIIS 186 (204)
Q Consensus 120 ~~-------~~--~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~~~-~s~~pg~~~~~---~~~f~~~p~~~~~vl~ 186 (204)
+. ++ +...+|++||+++||+|.+|++.|. +++.++++. ++++|+.+.++ .++|++ ||++||+
T Consensus 322 ~~~~~~~~g~~~~~~~~~l~~GdV~vvP~g~~h~~~n~--~~~~~v~f~~~~~~~~~~~laG~~~sv~~~---~p~~vla 396 (445)
T 2cav_A 322 QQQQQGLESMQLRRYAATLSEGDIIVIPSSFPVALKAA--SDLNMVGIGVNAENNERNFLAGHKENVIRQ---IPRQVSD 396 (445)
T ss_dssp ----------CCEEEEEEECTTCEEEECTTCCEEEEES--SSEEEEEEEESCTTCCEEESSSSTTBSGGG---SCHHHHH
T ss_pred CcccccccCcceEEEEeEecCCcEEEEcCCcEEEEEcC--CCeEEEEEEccCCCCCcEEcccchhhhhhh---CCHHHHH
Confidence 21 23 4788999999999999999999998 467777765 45689999887 789986 9999999
Q ss_pred HhcCCCHHHHHHHHhc
Q 048039 187 KTFLFDKKNVAILRSK 202 (204)
Q Consensus 187 ~~f~~~~~~v~~l~~~ 202 (204)
++|+++.+++++|++.
T Consensus 397 ~af~v~~~~v~~l~~~ 412 (445)
T 2cav_A 397 LTFPGSGEEVEELLEN 412 (445)
T ss_dssp HHSSSCHHHHHHHHHH
T ss_pred HHHCcCHHHHHHHHhc
Confidence 9999999999999863
No 11
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.94 E-value=1.2e-26 Score=207.17 Aligned_cols=157 Identities=20% Similarity=0.260 Sum_probs=137.2
Q ss_pred CCCCcEEeccCCCCCCCCCCCceEEEEeccccCCCCCceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecC
Q 048039 40 HADDFYFTGLDKQGNFSNPMGSKATPVYVQQIPGLNTLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTA 119 (204)
Q Consensus 40 ~~~df~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~ 119 (204)
....+.|+++..++.+.+. +++++.++..++|+|++++++++++++.||++.+||||+++.|++||++|++++++++++
T Consensus 211 ~~~~~~~~l~~~~p~~~~~-~G~~~~~~~~~~P~L~~l~is~a~~~l~~g~~~~pH~h~~A~Ei~~V~~G~~~v~~v~~~ 289 (416)
T 1uij_A 211 SSEDEPFNLRSRNPIYSNN-FGKFFEITPEKNPQLRDLDIFLSSVDINEGALLLPHFNSKAIVILVINEGDANIELVGIK 289 (416)
T ss_dssp GCSSSCEETTSSCCSEECS-SEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEEC
T ss_pred CCcccceeccccCCCccCC-CceEEEEChHHCccchhcCcceEEEEEcCCcEecceEcCCCcEEEEEEeeEEEEEEEcCC
Confidence 3567889988777665554 557999999999999999999999999999999999999999999999999999999875
Q ss_pred CC----------C--ceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEEEEc-CCCCCceecc---cccccCCCCCCHH
Q 048039 120 PD----------Y--RHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIAALN-SQNPGTSSIA---PALFTSKPVLNDE 183 (204)
Q Consensus 120 ~~----------~--~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~~~~-s~~pg~~~~~---~~~f~~~p~~~~~ 183 (204)
+. + +.....|++||+++||+|.+|++.|. +++.++++++ +++|+...++ .++|+. +|++
T Consensus 290 g~~~~~~~~~~~~~~~~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~l~f~~~~~~~~~~~laG~~~sv~~~---~p~~ 364 (416)
T 1uij_A 290 EQQQKQKQEEEPLEVQRYRAELSEDDVFVIPAAYPFVVNAT--SNLNFLAFGINAENNQRNFLAGEKDNVVRQ---IERQ 364 (416)
T ss_dssp ------------CCEEEEEEEEETTCEEEECTTCCEEEEES--SSEEEEEEEETCTTCCEEESSSSTTBSGGG---SCHH
T ss_pred CccccccccccccceEEEEEEecCCcEEEECCCCeEEEEcC--CCeEEEEEEcCCCCCcceecccchhhHHHh---CCHH
Confidence 21 0 24456999999999999999999998 6799998885 4599999887 789986 9999
Q ss_pred HHHHhcCCCHHHHHHHHhc
Q 048039 184 IISKTFLFDKKNVAILRSK 202 (204)
Q Consensus 184 vl~~~f~~~~~~v~~l~~~ 202 (204)
||+++|+++++++++|++.
T Consensus 365 vla~af~~~~~~v~~l~~~ 383 (416)
T 1uij_A 365 VQELAFPGSAQDVERLLKK 383 (416)
T ss_dssp HHHHHSSSCHHHHHHHTTS
T ss_pred HHHHHHCcCHHHHHHHHhc
Confidence 9999999999999999863
No 12
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=99.94 E-value=4.9e-26 Score=204.08 Aligned_cols=158 Identities=21% Similarity=0.251 Sum_probs=137.3
Q ss_pred CCCCCcEEeccCCCCCCCCCCCceEEEEeccccCCCCCceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEec
Q 048039 39 AHADDFYFTGLDKQGNFSNPMGSKATPVYVQQIPGLNTLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGT 118 (204)
Q Consensus 39 ~~~~df~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~ 118 (204)
.....+.|+++..++.+. ..|++++.++..++|+|++++++++++++.||++.+||||+++.|++||++|+++++++++
T Consensus 227 ~~~~~~~~~l~~~~p~~~-~~gG~v~~~~~~~~P~L~~l~is~a~v~l~pG~m~~pH~hp~A~Ei~~V~~G~~~v~vv~~ 305 (434)
T 2ea7_A 227 LSSQDEPFNLRNSKPIYS-NKFGRWYEMTPEKNPQLKDLDVFISSVDMKEGALLLPHYSSKAIVIMVINEGEAKIELVGL 305 (434)
T ss_dssp TTCSSSCEETTSSCCSEE-ETTEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEE
T ss_pred CCCcccceeeccCCCcee-CCCcEEEEEChhhCccccccCcceEEEEEcCCeeeccEEcCCCCEEEEEEeeEEEEEEEec
Confidence 445677899887777654 5677899999999999999999999999999999999999999999999999999999987
Q ss_pred CCC---------C--ceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEEEEc-CCCCCceecc---cccccCCCCCCHH
Q 048039 119 APD---------Y--RHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIAALN-SQNPGTSSIA---PALFTSKPVLNDE 183 (204)
Q Consensus 119 ~~~---------~--~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~~~~-s~~pg~~~~~---~~~f~~~p~~~~~ 183 (204)
++. + +.....|++||+++||+|.+|++.|. +++.+++++. +++++.+.++ .++|+. +|++
T Consensus 306 ~g~~~~~~~~~~~~~r~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~v~f~~~~~~~~~~~laG~~~sv~~~---~p~~ 380 (434)
T 2ea7_A 306 SDQQQQKQQEESLEVQRYRAELSEDDVFVIPAAYPVAINAT--SNLNFFAFGINAENNRRNFLAGGKDNVMSE---IPTE 380 (434)
T ss_dssp EECCCCTTSCCCEEEEEEEEEECTTCEEEECTTCCEEEEES--SSEEEEEEEETCTTCCEEESSSSTTBGGGG---SCHH
T ss_pred CccccccccccCcceEEEEEEecCCcEEEECCCCeEEEEcC--CCeEEEEEECCCCCCCceecccchhhhhhh---CCHH
Confidence 420 1 13455999999999999999999998 5788888764 5589999888 789986 9999
Q ss_pred HHHHhcCCCHHHHHHHHhc
Q 048039 184 IISKTFLFDKKNVAILRSK 202 (204)
Q Consensus 184 vl~~~f~~~~~~v~~l~~~ 202 (204)
||+++|+++.+++++|++.
T Consensus 381 vla~af~v~~~~v~~l~~~ 399 (434)
T 2ea7_A 381 VLEVSFPASGKKVEKLIKK 399 (434)
T ss_dssp HHHHHSSSCHHHHHHHHTT
T ss_pred HHHHHHCcCHHHHHHHHhc
Confidence 9999999999999999863
No 13
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=99.93 E-value=9.7e-26 Score=179.86 Aligned_cols=149 Identities=15% Similarity=0.209 Sum_probs=123.2
Q ss_pred CcEEeccCCCCCCCCCCCceEEEEec-----cccCCCCCceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEe
Q 048039 43 DFYFTGLDKQGNFSNPMGSKATPVYV-----QQIPGLNTLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIG 117 (204)
Q Consensus 43 df~~~~~~~~~~~~~~~g~~~~~~~~-----~~~P~l~~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~ 117 (204)
-|+|........+ ...|++++.++. ..+|+++ ++++.+++++||+..++| |+++.|++||++|++++++++
T Consensus 3 p~~f~~~~~~~~~-~~~~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~pg~~~~pH-h~~a~E~~yVl~G~~~v~v~~ 78 (178)
T 1dgw_A 3 PYLFRSNKFLTLF-KNQHGSLRLLQRFNEDTEKLENLR--DYRVLEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLVN 78 (178)
T ss_dssp TTEECGGGEEEEE-EETTEEEEEECCTTSSCGGGGGGT--TEEEEEEEECTTEEEEEE-EESSEEEEEEEESEEEEEEEE
T ss_pred Cceechhhcccce-EcCCCEEEEEcccCCcchhcCCcC--cEEEEEEEecCCcEecCc-CCCCCEEEEEEeEEEEEEEEe
Confidence 3666665544333 456888888876 6688877 589999999999999999 888899999999999999987
Q ss_pred cCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCC-CEEEEEEE-cCCCCCceec---c-----cccccCCCCCCHHHHHH
Q 048039 118 TAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKV-NAVAIAAL-NSQNPGTSSI---A-----PALFTSKPVLNDEIISK 187 (204)
Q Consensus 118 ~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~-~a~~i~~~-~s~~pg~~~~---~-----~~~f~~~p~~~~~vl~~ 187 (204)
++ + .+.+.|++||+++||+|.+|++.|.|++ ++++++++ ++++||.+.. + .++|+. +|++||++
T Consensus 79 ~~--~-~~~~~l~~GDv~~~P~g~~H~~~N~g~~~~l~~l~v~~~~~~~g~~~~~~l~g~~~~~~~~~~---~p~~vla~ 152 (178)
T 1dgw_A 79 PD--G-RDTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAITFRRPGTVEDFFLSSTKRLPSYLSA---FSKNFLEA 152 (178)
T ss_dssp TT--E-EEEEEEETTEEEEECTTCCEEEEECCSSSCEEEEEEEECCSSTTCCCEEESSCCSSCCCGGGG---SCHHHHHH
T ss_pred CC--C-cEEEEECCCCEEEECCCCeEEEEeCCCCCCEEEEEEECCCCCCCceEEeeccCCcCcchhhhh---CCHHHHHH
Confidence 64 2 3689999999999999999999999986 78888875 5678885433 2 578886 99999999
Q ss_pred hcCCCHHHHHHHHh
Q 048039 188 TFLFDKKNVAILRS 201 (204)
Q Consensus 188 ~f~~~~~~v~~l~~ 201 (204)
+|+++++++++|+.
T Consensus 153 af~v~~~~~~~l~~ 166 (178)
T 1dgw_A 153 SYDSPYDEIEQTLL 166 (178)
T ss_dssp HHTSCHHHHHHHTT
T ss_pred HHCcCHHHHHHHhc
Confidence 99999999999983
No 14
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=99.93 E-value=1.7e-25 Score=199.54 Aligned_cols=154 Identities=18% Similarity=0.204 Sum_probs=133.0
Q ss_pred CCcEEeccCCCCCCCCCCCceEEEEecccc-CCCCCceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCC
Q 048039 42 DDFYFTGLDKQGNFSNPMGSKATPVYVQQI-PGLNTLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAP 120 (204)
Q Consensus 42 ~df~~~~~~~~~~~~~~~g~~~~~~~~~~~-P~l~~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~ 120 (204)
..++|+++..++.+++. +++++.++..++ |.|+++++++++++|.||++.+||||+++.|++||++|+++++++++++
T Consensus 226 ~~~~~nl~~~~p~~~n~-~G~~~~~~~~~~~p~L~~~gis~~r~~l~pgg~~~PH~~p~A~ei~yV~~G~g~v~vv~~~~ 304 (418)
T 3s7i_A 226 ITNPINLREGEPDLSNN-FGKLFEVKPDKKNPQLQDLDMMLTCVEIKEGALMLPHFNSKAMVIVVVNKGTGNLELVAVRK 304 (418)
T ss_dssp CCCCEETTCSCCSEEET-TEEEEEECSBTTBHHHHHHTCEEEEEEECTTEEEEEEEESSCEEEEEEEECCEEEEEEEEEE
T ss_pred CCcccccccCCCceeCC-CCeEEEechHHcchhhccCCeeEEEEEecCCceeCceecCCCCEEEEEEeCeEEEEEEeCCC
Confidence 47889998888776544 556899999999 9999999999999999999999999999999999999999999998652
Q ss_pred C-----------------------CceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEEEE-cCCCCCceeccc---cc
Q 048039 121 D-----------------------YRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIAAL-NSQNPGTSSIAP---AL 173 (204)
Q Consensus 121 ~-----------------------~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~~~-~s~~pg~~~~~~---~~ 173 (204)
. .+.....|++||+++||+|.+|++.|.+ ++.++++. ++++|+.+.++. ++
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GDV~vvP~G~~~~~~~~~--~l~~v~f~~~~~~~~~~~LAG~~~sv 382 (418)
T 3s7i_A 305 EQQQRGRREEEEDEDEEEEGSNREVRRYTARLKEGDVFIMPAAHPVAINASS--ELHLLGFGINAENNHRIFLAGDKDNV 382 (418)
T ss_dssp C-------------------CCEEEEEEEEEECTTCEEEECTTCCEEEEESS--CEEEEEEEESCTTCCEEESSSSTTBH
T ss_pred ccccccccccccccccccccccccceEEEeeeCCCCEEEECCCCEEEEECCC--CEEEEEEEcCCCCCcceEccCchhhh
Confidence 0 0345789999999999999999998854 47776654 466999999884 68
Q ss_pred ccCCCCCCHHHHHHhcCCCHHHHHHHHh
Q 048039 174 FTSKPVLNDEIISKTFLFDKKNVAILRS 201 (204)
Q Consensus 174 f~~~p~~~~~vl~~~f~~~~~~v~~l~~ 201 (204)
|+. ||++||+++|+++.+++++|++
T Consensus 383 ~~~---~~~evla~af~v~~~~v~~L~~ 407 (418)
T 3s7i_A 383 IDQ---IEKQAKDLAFPGSGEQVEKLIK 407 (418)
T ss_dssp HHH---SCHHHHHHHSSSCHHHHHHHHH
T ss_pred hhc---CCHHHHHHHhCCCHHHHHHHHh
Confidence 885 9999999999999999999986
No 15
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.90 E-value=4.5e-23 Score=179.80 Aligned_cols=159 Identities=17% Similarity=0.205 Sum_probs=137.4
Q ss_pred CCCCCCCCcEEeccCCCCCCCCCCCceEEEEeccccCCCCCceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEE
Q 048039 36 PKTAHADDFYFTGLDKQGNFSNPMGSKATPVYVQQIPGLNTLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGF 115 (204)
Q Consensus 36 ~~~~~~~df~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~ 115 (204)
+...+.++|.|+.+..++. .+..|+.++.+....+|+++ .+++.+++++||+..++|||+++.|++||++|++++.+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~-~~~~gg~~~~~~~~~~~~~~--~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~v 270 (361)
T 2vqa_A 194 QTAKIEVPHTHNLLGQQPL-VSLGGNELRLASAKEFPGSF--NMTGALIHLEPGAMRQLHWHPNADEWQYVLDGEMDLTV 270 (361)
T ss_dssp CCCBCCSCCEEECTTSCCS-EEETTEEEEEECTTTCTTST--TCEEEEEEECTTCEEEEEECSSCCEEEEEEESCEEEEE
T ss_pred cCCCCCcceEeccccCCCc-ccCCCceEEEEehhhCcCcc--cceEEEEEECCCcccccccCCCCCEEEEEEeCEEEEEE
Confidence 3456788999998877763 35678889998888899876 46788999999999999999988999999999999999
Q ss_pred EecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEEEEcCCCCCceecccccccCCCCCCHHHHHHhcCCCHHH
Q 048039 116 IGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIAALNSQNPGTSSIAPALFTSKPVLNDEIISKTFLFDKKN 195 (204)
Q Consensus 116 ~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~~~~s~~pg~~~~~~~~f~~~p~~~~~vl~~~f~~~~~~ 195 (204)
.+.+ ++.+.+.|++||++++|+|.+|++.|.+++++++++++...+++...++.+ ++. +|++||+++|++++++
T Consensus 271 ~~~~--g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~~~~~~~~~~~~~~~~-~~~---~~~~vl~~~f~~~~~~ 344 (361)
T 2vqa_A 271 FASE--GKASVSRLQQGDVGYVPKGYGHAIRNSSQKPLDIVVVFNDGDYQSIDLSTW-LAS---NPSSVLGNTFQISPEL 344 (361)
T ss_dssp ECST--TCEEEEEECTTCEEEECTTCEEEEECCSSSCEEEEEEESSSSCCCEEHHHH-HHT---SCHHHHHHHHTCCHHH
T ss_pred EcCC--CcEEEEEECCCCEEEECCCCeEEeEECCCCCEEEEEEECCCCcceeeHHHH-hhh---CCHHHHHHHHCcCHHH
Confidence 7543 433589999999999999999999999999999999999999999888864 564 9999999999999999
Q ss_pred HHHHHhcC
Q 048039 196 VAILRSKF 203 (204)
Q Consensus 196 v~~l~~~~ 203 (204)
+++|++..
T Consensus 345 ~~~l~~~~ 352 (361)
T 2vqa_A 345 TKKLPVQD 352 (361)
T ss_dssp HTTSCCSC
T ss_pred HHhhhccC
Confidence 99998653
No 16
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=99.90 E-value=1.4e-23 Score=186.01 Aligned_cols=137 Identities=21% Similarity=0.250 Sum_probs=118.8
Q ss_pred CCCCceEEEEeccccCCCCCceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEec------CCCCceeEEEeC
Q 048039 57 NPMGSKATPVYVQQIPGLNTLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGT------APDYRHFSKILN 130 (204)
Q Consensus 57 ~~~g~~~~~~~~~~~P~l~~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~------~~~~~~~~~~L~ 130 (204)
...+++++.++..+ ++++++++++.||++.+||||+++.|++||++|+++++++++ ++ ++.+...|+
T Consensus 223 ~n~~G~~~~v~~~~------l~is~a~v~l~pG~~~~PH~h~~A~Ei~yVl~G~g~v~vv~~~~~~~~~g-~~~~~~~l~ 295 (397)
T 2phl_A 223 GNEFGNLTERTDNS------LNVLISSIEMEEGALFVPHYYSKAIVILVVNEGEAHVELVGPKGNKETLE-YESYRAELS 295 (397)
T ss_dssp EETTEEEEEEEETT------TTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEECC--CCSC-EEEEEEEEE
T ss_pred cCCCCeEEEEeecc------CCeeEEEEEEcCCcEeeeeEcCCCCEEEEEEeeeEEEEEEeccccccCCC-ceEEEEEec
Confidence 34566688888876 689999999999999999999999999999999999999987 32 467899999
Q ss_pred CCcEEEECCCCeEEEEeCCCCCEEEEEEEc-CCCCCceecc---cccccCCC-CCC-HHHHHHhcCCCHHHHHHHHhc
Q 048039 131 KGDVFVFPMGLLHYQRNVGKVNAVAIAALN-SQNPGTSSIA---PALFTSKP-VLN-DEIISKTFLFDKKNVAILRSK 202 (204)
Q Consensus 131 ~Gd~~~~p~g~~H~~~N~g~~~a~~i~~~~-s~~pg~~~~~---~~~f~~~p-~~~-~~vl~~~f~~~~~~v~~l~~~ 202 (204)
+||+++||+|.+|++.|.+ ++.++++.. +++|+.+.++ .++|++-| +|+ ++||+++|+++++++++|++.
T Consensus 296 ~GDV~vvP~G~~h~~~n~~--~l~~l~f~~~s~~~~~~~laG~~~sv~~~~p~~~~~~eVla~af~v~~~~v~~l~~~ 371 (397)
T 2phl_A 296 KDDVFVIPAAYPVAIKATS--NVNFTGFGINANNNNRNLLAGKTDNVISSIGRALDGKDVLGLTFSGSGDEVMKLINK 371 (397)
T ss_dssp TTCEEEECTTCCEEEEESS--SEEEEEEEESCTTCCEEESSSSSSBHHHHHHTSTTHHHHHHHHSSSCHHHHHHHHTT
T ss_pred CCCEEEECCCCeEEEEeCC--CeEEEEEECCCCCCcceecccchhhHHhhCCCccchHHHHHHHhCcCHHHHHHHHhc
Confidence 9999999999999999985 788887665 5599998888 88998722 233 999999999999999999875
No 17
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.88 E-value=1.1e-22 Score=183.14 Aligned_cols=137 Identities=23% Similarity=0.332 Sum_probs=115.6
Q ss_pred EEEEeccccCCCCCceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCc-------------------
Q 048039 63 ATPVYVQQIPGLNTLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYR------------------- 123 (204)
Q Consensus 63 ~~~~~~~~~P~l~~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~------------------- 123 (204)
.++++....|.|++.|++++|++|+||++.+||||+ +.|++||++|++.++++.++....
T Consensus 47 ~~~~~~~~~~~l~~~gvs~~r~~i~pggl~~Ph~h~-a~ei~yVl~G~g~vg~v~p~~~~tf~~~~~~~~~~~~~~~d~~ 125 (459)
T 2e9q_A 47 FTEVWDQDNDEFQCAGVNMIRHTIRPKGLLLPGFSN-APKLIFVAQGFGIRGIAIPGCAETYQTDLRRSQSAGSAFKDQH 125 (459)
T ss_dssp EEEECCTTSHHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEECCTTCCCCEEECCC-------CCCEEE
T ss_pred EEEecCCCChhhccCceEEEEEEEcCCCEecceecC-CceEEEEEeeEEEEEEEeCCCcchhccchhhcccccccccccc
Confidence 555677788999999999999999999999999997 699999999999999986641000
Q ss_pred eeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEEEEcCCC--------CCceecc-------------------------
Q 048039 124 HFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIAALNSQN--------PGTSSIA------------------------- 170 (204)
Q Consensus 124 ~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~~~~s~~--------pg~~~~~------------------------- 170 (204)
.+.+.|++||+++||+|++||+.|.|++++++++++++.+ +..+.++
T Consensus 126 q~~~~l~~GDv~~iPaG~~H~~~N~g~~~l~~l~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~~~~~~~~ 205 (459)
T 2e9q_A 126 QKIRPFREGDLLVVPAGVSHWMYNRGQSDLVLIVFADTRNVANQIDPYLRKFYLAGRPEQVERGVEEWERSSRKGSSGEK 205 (459)
T ss_dssp CCCEEEETTEEEEECTTCCEEEEECSSSCEEEEEEEESSSTTCCSCSSCCEEESSSCCCCCSSTTCC------------C
T ss_pred ceeEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEecCCCcccccCcccceeeccCCccccchhhhcccccccccccccc
Confidence 1257999999999999999999999999999999998554 2223333
Q ss_pred -cccccCCCCCCHHHHHHhcCCCHHHHHHHHhcC
Q 048039 171 -PALFTSKPVLNDEIISKTFLFDKKNVAILRSKF 203 (204)
Q Consensus 171 -~~~f~~~p~~~~~vl~~~f~~~~~~v~~l~~~~ 203 (204)
.++|+. +++++|+++|+++.+++++|++..
T Consensus 206 ~~nif~g---f~~evLa~aF~v~~~~v~kL~~~~ 236 (459)
T 2e9q_A 206 SGNIFSG---FADEFLEEAFQIDGGLVRKLKGED 236 (459)
T ss_dssp CCCTTTT---SCHHHHHHHHTCCHHHHHHHHTTT
T ss_pred ccchhhc---CCHHHHHhhcCCCHHHHHhhhhcc
Confidence 488985 999999999999999999998753
No 18
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=99.88 E-value=3.3e-22 Score=179.23 Aligned_cols=136 Identities=20% Similarity=0.259 Sum_probs=116.2
Q ss_pred CCCceEEEE--eccccCCCCCce-EEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcE
Q 048039 58 PMGSKATPV--YVQQIPGLNTLG-LSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDV 134 (204)
Q Consensus 58 ~~g~~~~~~--~~~~~P~l~~~g-~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~ 134 (204)
..|+.+..+ +....+.+++.+ +++++++++||+..+|| |+++.|++||++|+++++++++ ++.+++.|++||+
T Consensus 37 se~G~ir~l~~~~~~~~~l~~~~~~s~~~~~l~PGg~~~pH-h~~a~Ei~yVl~G~g~v~~v~~---~~~~~~~l~~GDv 112 (434)
T 2ea7_A 37 NEWGHIRVLQRFDQRSKQMQNLENYRVVEFKSKPNTLLLPH-HADADFLLVVLNGTAVLTLVNP---DSRDSYILEQGHA 112 (434)
T ss_dssp ETTEEEEEECCSTTTCGGGGGGTTCEEEEEEECTTEEEEEE-EESEEEEEEEEESEEEEEEECS---SCEEEEEEETTEE
T ss_pred cCCEEEEEEeccCCcccccCccccEEEEEEEecCCcCccCc-cCCCceEEEEEecEEEEEEEeC---CCCEEEEeCCCCE
Confidence 356777776 335567888887 99999999999999999 7788999999999999999865 3458999999999
Q ss_pred EEECCCCeEEEEeCC-CCCEEEEEEEc-CCCCCce---eccc-----ccccCCCCCCHHHHHHhcCCCHHHHHHHH
Q 048039 135 FVFPMGLLHYQRNVG-KVNAVAIAALN-SQNPGTS---SIAP-----ALFTSKPVLNDEIISKTFLFDKKNVAILR 200 (204)
Q Consensus 135 ~~~p~g~~H~~~N~g-~~~a~~i~~~~-s~~pg~~---~~~~-----~~f~~~p~~~~~vl~~~f~~~~~~v~~l~ 200 (204)
+++|+|..|++.|.| ++++++++++. +++||.+ .++. ++|+. +|++||+++|+++.+++++|+
T Consensus 113 ~~iP~G~~H~~~N~g~~e~l~~l~~~~~s~~pg~~~~f~l~g~~~~~~~~~~---~~~~vLa~af~v~~~~v~~l~ 185 (434)
T 2ea7_A 113 QKIPAGTTFFLVNPDDNENLRIIKLAIPVNNPHRFQDFFLSSTEAQQSYLRG---FSKNILEASFDSDFKEINRVL 185 (434)
T ss_dssp EEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEEECSCCSSCCCGGGG---SCHHHHHHHHTSCHHHHHHHH
T ss_pred EEECCCccEEEEeCCCCCCeEEEEEecCCCCCCceeeeeecCCcchhhhhhc---CCHHHHHHHhCCCHHHHHhhh
Confidence 999999999999998 78999999874 6777643 3443 47775 999999999999999999998
No 19
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=99.88 E-value=4.8e-22 Score=178.68 Aligned_cols=153 Identities=16% Similarity=0.216 Sum_probs=122.4
Q ss_pred CCCcEEeccCCCCCCCCCCCceEEEEec--cccCCCCCce-EEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEe
Q 048039 41 ADDFYFTGLDKQGNFSNPMGSKATPVYV--QQIPGLNTLG-LSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIG 117 (204)
Q Consensus 41 ~~df~~~~~~~~~~~~~~~g~~~~~~~~--~~~P~l~~~g-~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~ 117 (204)
.+-|+|......... ...++.+..+.. ...|.+++.+ +++++++++||+..++| |++++|++||++|++++++++
T Consensus 46 ~~p~vf~~~~~~~~i-~~e~G~i~~l~~~~~~~~~l~~~g~~s~~~~~l~Pgg~~~pH-h~~a~E~~yVl~G~g~v~~v~ 123 (445)
T 2cav_A 46 NNPYLFRSNKFLTLF-KNQHGSLRLLQRFNEDTEKLENLRDYRVLEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLVN 123 (445)
T ss_dssp CCTTEECGGGEEEEE-EETTEEEEEECCTTSSCSTTGGGTTEEEEEEEECSSEEEEEE-EESSEEEEEEEESEEEEEEEE
T ss_pred CCCeEEchhhcCceE-EcCCEEEEEEeccCcccccccccCcEEEEEEEECCCcCccCc-CCCCceEEEEEeCEEEEEEEe
Confidence 345666654322112 124666666533 4556887777 99999999999999999 667799999999999999987
Q ss_pred cCCCCceeEEEeCCCcEEEECCCCeEEEEeCC-CCCEEEEEEEc-CCCCCce---ecc-----cccccCCCCCCHHHHHH
Q 048039 118 TAPDYRHFSKILNKGDVFVFPMGLLHYQRNVG-KVNAVAIAALN-SQNPGTS---SIA-----PALFTSKPVLNDEIISK 187 (204)
Q Consensus 118 ~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g-~~~a~~i~~~~-s~~pg~~---~~~-----~~~f~~~p~~~~~vl~~ 187 (204)
++ ++ +++.|++||++++|+|++|++.|.| +++++++++++ +++||.+ .++ .++|+. +|++||++
T Consensus 124 ~~--~~-~~~~l~~GDv~~~P~G~~H~~~N~g~~~~l~~l~v~~~~~~pg~~~~F~laG~~~~~~~~~~---~~~~vLa~ 197 (445)
T 2cav_A 124 PD--GR-DTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAITFRRPGTVEDFFLSSTKRLPSYLSA---FSKNFLEA 197 (445)
T ss_dssp TT--EE-EEEEEETTEEEEECTTCCEEEEECCSSCCEEEEEEEECCSSTTCCCEEESSCCSSCCCGGGG---SCHHHHHH
T ss_pred CC--CC-EEEEecCCCEEEECCCCcEEEEECCCCCCEEEEEEeccCCCCCceeeeeccCCCchhhhhhc---CCHHHHHH
Confidence 64 34 8999999999999999999999998 79999999987 6678743 233 378885 99999999
Q ss_pred hcCCCHHHHHHHHh
Q 048039 188 TFLFDKKNVAILRS 201 (204)
Q Consensus 188 ~f~~~~~~v~~l~~ 201 (204)
+|+++.+++++|++
T Consensus 198 af~v~~~~v~~l~~ 211 (445)
T 2cav_A 198 SYDSPYDEIEQTLL 211 (445)
T ss_dssp HHTSCHHHHHHHTT
T ss_pred HhCCCHHHHHhhhc
Confidence 99999999999984
No 20
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.87 E-value=4.4e-22 Score=177.63 Aligned_cols=136 Identities=18% Similarity=0.283 Sum_probs=115.3
Q ss_pred CCCceEEEE--eccccCCCCCce-EEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcE
Q 048039 58 PMGSKATPV--YVQQIPGLNTLG-LSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDV 134 (204)
Q Consensus 58 ~~g~~~~~~--~~~~~P~l~~~g-~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~ 134 (204)
..|+.+..+ +....+.+++.+ +++++++++||+..+|| |+++.|++||++|++++++++++ +.+++.|++||+
T Consensus 25 ~e~G~ir~l~~~~~~~~~l~~~~~~s~~~~~l~PGg~~~pH-h~~a~E~~yVl~G~g~v~~v~~~---~~~~~~l~~GDv 100 (416)
T 1uij_A 25 NQNGRIRLLQRFNKRSPQLENLRDYRIVQFQSKPNTILLPH-HADADFLLFVLSGRAILTLVNND---DRDSYNLHPGDA 100 (416)
T ss_dssp CSSEEEEEECCHHHHCGGGGGGTTCEEEEEEECTTEEEEEE-EESEEEEEEEEESCEEEEEECSS---CEEEEEECTTEE
T ss_pred cCCEEEEEEeccCCccccccCcccEEEEEEEeccCcCcccc-cCCCceEEEEEeeEEEEEEEECC---CCeEEEecCCCE
Confidence 456777776 334457777777 99999999999999999 76789999999999999998763 347999999999
Q ss_pred EEECCCCeEEEEeCC-CCCEEEEEEEc-CCCCCce---eccc-----ccccCCCCCCHHHHHHhcCCCHHHHHHHH
Q 048039 135 FVFPMGLLHYQRNVG-KVNAVAIAALN-SQNPGTS---SIAP-----ALFTSKPVLNDEIISKTFLFDKKNVAILR 200 (204)
Q Consensus 135 ~~~p~g~~H~~~N~g-~~~a~~i~~~~-s~~pg~~---~~~~-----~~f~~~p~~~~~vl~~~f~~~~~~v~~l~ 200 (204)
++||+|..|++.|.| ++++++++++. +++||.+ .++. ++|+. +|++||+++|+++.+++++|+
T Consensus 101 ~~iP~G~~H~~~N~gg~e~l~~l~~~~~~~~pg~~~~f~l~g~~~~~~~~~~---~~~~vLa~af~v~~~~v~~l~ 173 (416)
T 1uij_A 101 QRIPAGTTYYLVNPHDHQNLKMIWLAIPVNKPGRYDDFFLSSTQAQQSYLQG---FSHNILETSFHSEFEEINRVL 173 (416)
T ss_dssp EEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEEESSCBSSCCCGGGG---SCHHHHHHHHTSCHHHHHHHH
T ss_pred EEECCCCeEEEEecCCCCCEEEEEEeccCCCCCcceeeeecCCcccchhhhc---CCHHHHHHHhCcCHHHHHhhh
Confidence 999999999999995 99999999986 6777643 3332 47775 999999999999999999998
No 21
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.87 E-value=5.6e-22 Score=179.45 Aligned_cols=134 Identities=14% Similarity=0.249 Sum_probs=115.0
Q ss_pred EEEEeccccCCCCCceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCc-------------------
Q 048039 63 ATPVYVQQIPGLNTLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYR------------------- 123 (204)
Q Consensus 63 ~~~~~~~~~P~l~~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~------------------- 123 (204)
.++++....|.|++.|+++++++|+||+..+||||+ +.|++||++|++.+++++++ ++
T Consensus 32 ~~e~~~~~~~~l~~~gvs~~r~~l~Pggl~~Ph~~~-a~ei~yV~~G~g~~g~v~pg--~~et~~~~~~~~~~~~~~~~~ 108 (476)
T 1fxz_A 32 LIETWNPNNKPFQCAGVALSRCTLNRNALRRPSYTN-GPQEIYIQQGKGIFGMIYPG--CPSTFEEPQQPQQRGQSSRPQ 108 (476)
T ss_dssp EEEECCTTSHHHHHHTCEEEEEEECTTEEEEEEEES-SCEEEEEEECCEEEEEECTT--CCCC-----------------
T ss_pred eEEeeCCCChhhccCceEEEEEEEcCCCEecceecC-CceEEEEEecEEEEEEEcCC--Ccchhhccccccccccccccc
Confidence 455567778999999999999999999999999998 59999999999999999764 21
Q ss_pred ---eeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEEEEcCCCC--------Cceec-----------------------
Q 048039 124 ---HFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIAALNSQNP--------GTSSI----------------------- 169 (204)
Q Consensus 124 ---~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~~~~s~~p--------g~~~~----------------------- 169 (204)
.+.+.|++||+++||+|++||+.|.|+++++++++++..++ ..+.+
T Consensus 109 d~~qk~~~l~~GDvi~iPaG~~h~~~N~G~~~l~~i~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~~~~~ 188 (476)
T 1fxz_A 109 DRHQKIYNFREGDLIAVPTGVAWWMYNNEDTPVVAVSIIDTNSLENQLDQMPRRFYLAGNQEQEFLKYQQEQGGHQSQKG 188 (476)
T ss_dssp -CCCCEEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTCTTCCSCSSCCEEESSSSCCCTTHHHHC----------
T ss_pred cccceEEEEeCCCEEEECCCCcEEEEeCCCCCEEEEEEecCCCcccccCCccceeeccCCcccccccccccccccccccc
Confidence 13789999999999999999999999999999999985543 22333
Q ss_pred ---------ccccccCCCCCCHHHHHHhcCCCHHHHHHHHhc
Q 048039 170 ---------APALFTSKPVLNDEIISKTFLFDKKNVAILRSK 202 (204)
Q Consensus 170 ---------~~~~f~~~p~~~~~vl~~~f~~~~~~v~~l~~~ 202 (204)
+.++|+. +++++|+++|+++.+++++|++.
T Consensus 189 ~~~~~~~~~~~~if~g---f~~~vLa~af~v~~~~~~kl~~~ 227 (476)
T 1fxz_A 189 KHQQEEENEGGSILSG---FTLEFLEHAFSVDKQIAKNLQGE 227 (476)
T ss_dssp ---------CCCGGGG---SCHHHHHHHHTCCHHHHHHHSCC
T ss_pred ccccccccccchhhhc---CCHHHHHhhhCCCHHHHHhhhcc
Confidence 2478985 99999999999999999999864
No 22
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=99.86 E-value=1.5e-21 Score=173.04 Aligned_cols=137 Identities=16% Similarity=0.190 Sum_probs=117.6
Q ss_pred CCCCceEEEE--eccccCCCCCce-EEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCc
Q 048039 57 NPMGSKATPV--YVQQIPGLNTLG-LSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGD 133 (204)
Q Consensus 57 ~~~g~~~~~~--~~~~~P~l~~~g-~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd 133 (204)
...++.+..+ +....|.+++.+ +++++++++||++.+|||| ++.|++||++|++++++++++ ++ +++.|++||
T Consensus 27 ~~e~G~i~~l~~~~~~~~~l~~~~~~s~~~~~l~pgg~~~ph~~-~a~ei~yVl~G~~~v~~v~~~--~~-~~~~l~~GD 102 (397)
T 2phl_A 27 KNQYGHIRVLQRFDQQSKRLQNLEDYRLVEFRSKPETLLLPQQA-DAELLLVVRSGSAILVLVKPD--DR-REYFFLTSD 102 (397)
T ss_dssp EETTEEEEEECCHHHHCGGGGGGTTCEEEEEEECSSEEEEEEEE-SEEEEEEEEESEEEEEEEETT--TE-EEEEEEESS
T ss_pred EcCCEEEEEecccCCCChhhcccccEEEEEEEECCCcCccCEec-CCCeEEEEEeeeEEEEEEeCC--Cc-EEEEECCCC
Confidence 3567778877 556778999888 9999999999999999999 579999999999999999875 44 799999999
Q ss_pred E------EEECCCCeEEEEeCC-CCCEEEEEEEcCCC-CC--ceecc-----cccccCCCCCCHHHHHHhcCCCHHHHHH
Q 048039 134 V------FVFPMGLLHYQRNVG-KVNAVAIAALNSQN-PG--TSSIA-----PALFTSKPVLNDEIISKTFLFDKKNVAI 198 (204)
Q Consensus 134 ~------~~~p~g~~H~~~N~g-~~~a~~i~~~~s~~-pg--~~~~~-----~~~f~~~p~~~~~vl~~~f~~~~~~v~~ 198 (204)
+ ++||+|++||+.|.| ++++++++++.+.+ |. .+.++ .++|+. +|++||+++|+++.+++++
T Consensus 103 v~~~~~~~~iP~G~~h~~~N~g~~~~l~~i~~~~~~~~~~~~~f~L~G~~~~~s~~~~---~~~~vLa~af~v~~~~v~~ 179 (397)
T 2phl_A 103 NPIFSDHQKIPAGTIFYLVNPDPKEDLRIIQLAMPVNNPQIHEFFLSSTEAQQSYLQE---FSKHILEASFNSKFEEINR 179 (397)
T ss_dssp CTTSCSEEEECTTCEEEEEECCSSCCEEEEEEEEESSSSSCCEEECCCBTTBCCGGGG---SCHHHHHHHHTSCHHHHHH
T ss_pred cccccceEEECCCCcEEEEeCCCCCCeEEEEeecCCCCccceeeeccCCCchhHHhhc---CCHHHHHHHhCCCHHHHHh
Confidence 9 999999999999999 78999999987443 42 23333 357775 9999999999999999999
Q ss_pred HH
Q 048039 199 LR 200 (204)
Q Consensus 199 l~ 200 (204)
|+
T Consensus 180 l~ 181 (397)
T 2phl_A 180 VL 181 (397)
T ss_dssp HH
T ss_pred hh
Confidence 98
No 23
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=99.86 E-value=2.7e-21 Score=173.88 Aligned_cols=138 Identities=20% Similarity=0.347 Sum_probs=114.7
Q ss_pred CCceEEEEeccccCCCCCceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCc---------------
Q 048039 59 MGSKATPVYVQQIPGLNTLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYR--------------- 123 (204)
Q Consensus 59 ~g~~~~~~~~~~~P~l~~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~--------------- 123 (204)
.|+.+ +++....+.+++.|++++|++|+||++.+|||| ++.|++||++|++.++++.++. .+
T Consensus 31 e~G~~-e~~d~~~~~l~~~gvs~~R~~i~P~gl~~Ph~h-~a~ei~yV~qG~g~~g~v~pgc-~etf~~~~~~~~~~~~~ 107 (465)
T 3qac_A 31 ERGLT-EVWDSNEQEFRCAGVSVIRRTIEPHGLLLPSFT-SAPELIYIEQGNGITGMMIPGC-PETYESGSQQFQGGEDE 107 (465)
T ss_dssp TTEEE-EECCTTSHHHHHHTCEEEEEEECTTEEEEEEEE-SSCEEEEEEECEEEEEEECTTC-CCCC-------------
T ss_pred CCcEE-EEECCCChhhcccceEEEEEEEcCCcCcccEEc-CCCEEEEEEECcEEEEEecCCC-Cceeecchhcccccccc
Confidence 34444 455566678888899999999999999999999 7899999999999999986531 11
Q ss_pred ---------------------eeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEEEEcCCCC---------Cceecc---
Q 048039 124 ---------------------HFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIAALNSQNP---------GTSSIA--- 170 (204)
Q Consensus 124 ---------------------~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~~~~s~~p---------g~~~~~--- 170 (204)
.+.+.+++||++++|+|+.||+.|.|++++++++++++.|. ..+.++
T Consensus 108 ~~~~~~~~~~~~~~~~~~d~hqk~~~~~~GDvi~iPaG~~hw~~N~G~~~lv~v~~~d~~n~~nqld~~~~r~F~LaG~~ 187 (465)
T 3qac_A 108 RIREQGSRKFGMRGDRFQDQHQKIRHLREGDIFAMPAGVSHWAYNNGDQPLVAVILIDTANHANQLDKNFPTRFYLAGKP 187 (465)
T ss_dssp -----------------CCCCCCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEECTTSTTCCSCSSSCCEEESSSCC
T ss_pred ccccccccccccccccccccccceeeecCCCEEEECCCCeEEEEcCCCCCEEEEEEEcCCCcccccccccceeEEecCCC
Confidence 12569999999999999999999999999999999986543 334443
Q ss_pred ---------------------cccccCCCCCCHHHHHHhcCCCHHHHHHHHhc
Q 048039 171 ---------------------PALFTSKPVLNDEIISKTFLFDKKNVAILRSK 202 (204)
Q Consensus 171 ---------------------~~~f~~~p~~~~~vl~~~f~~~~~~v~~l~~~ 202 (204)
.++|+. ++.++|+++|+++.+++++|++.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~ni~sg---F~~e~La~Af~v~~~~~~kl~~~ 237 (465)
T 3qac_A 188 QQEHSGEHQFSRESRRGERNTGNIFRG---FETRLLAESFGVSEEIAQKLQAE 237 (465)
T ss_dssp CCSCC--------------CCCCGGGG---SCHHHHHHHHTCCHHHHHHHHTT
T ss_pred ccccccccccccccccccccccchhhc---CCHHHHHHHhCCCHHHHHHhhhc
Confidence 468885 99999999999999999999753
No 24
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=99.85 E-value=1.9e-21 Score=176.17 Aligned_cols=134 Identities=13% Similarity=0.264 Sum_probs=115.5
Q ss_pred eEEEEeccccCCCCCceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCce-----------------
Q 048039 62 KATPVYVQQIPGLNTLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRH----------------- 124 (204)
Q Consensus 62 ~~~~~~~~~~P~l~~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~----------------- 124 (204)
.+++++....|+|+++|++++|++|.||++.+||+| ++.|++||++|++.++++.++. .+.
T Consensus 29 G~~e~~~~~~~~L~~~gvs~~R~~i~pggl~lPh~~-~A~ei~~V~qG~g~~G~v~p~~-~e~f~~~~~~~~~~~~~~~d 106 (496)
T 3ksc_A 29 GLIETWNPNNKQFRCAGVALSRATLQRNALRRPYYS-NAPQEIFIQQGNGYFGMVFPGC-PETFEEPQESEQGEGRRYRD 106 (496)
T ss_dssp EEEEECCTTSHHHHHHTCEEEEEEECTTEEEEEEEE-SSCEEEEEEECCEEEEEECTTC-CCC---------------CC
T ss_pred cEEEeccccchhhccCCceEEEEEecCCCEeCceEc-CCCEEEEEEeCceEEEEEeCCC-Cccchhhhhccccccccccc
Confidence 467778889999999999999999999999999999 7899999999999999987631 111
Q ss_pred ---eEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEEEEcCCCCCc--------eecc-----------------------
Q 048039 125 ---FSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIAALNSQNPGT--------SSIA----------------------- 170 (204)
Q Consensus 125 ---~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~~~~s~~pg~--------~~~~----------------------- 170 (204)
+.+.|++||+|+||+|++||+.|.|++++++++++...++.. +.++
T Consensus 107 ~~qk~~~l~~GDV~viPaG~~h~~~N~G~~~lv~v~~~d~~n~~NQld~~~r~F~LaG~~~~~~~~~~~~~~~~~~~~~~ 186 (496)
T 3ksc_A 107 RHQKVNRFREGDIIAVPTGIVFWMYNDQDTPVIAVSLTDIRSSNNQLDQMPRRFYLAGNHEQEFLQYQHQQGGKQEQENE 186 (496)
T ss_dssp CCCCEEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTCTTCCSCSSCCEEESSSSCCCTTGGGCC-----------
T ss_pred chheeeccCCCCEEEECCCCcEEEEcCCCCCEEEEEEeccCcccccCCCceeeeEecCCCcccccccccccccccccccc
Confidence 246999999999999999999999999999999997655322 2222
Q ss_pred -cccccCCCCCCHHHHHHhcCCCHHHHHHHH
Q 048039 171 -PALFTSKPVLNDEIISKTFLFDKKNVAILR 200 (204)
Q Consensus 171 -~~~f~~~p~~~~~vl~~~f~~~~~~v~~l~ 200 (204)
.++|+. ++.++|+.||+++.+++++|+
T Consensus 187 ~~ni~sg---F~~e~La~Af~v~~e~~~kl~ 214 (496)
T 3ksc_A 187 GNNIFSG---FKRDFLEDAFNVNRHIVDRLQ 214 (496)
T ss_dssp CCSGGGG---SCHHHHHHHHTCCHHHHHHHT
T ss_pred CCCchhh---cCHHHHHHHHCCCHHHHHHHH
Confidence 478885 999999999999999999998
No 25
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=99.85 E-value=5e-21 Score=170.69 Aligned_cols=134 Identities=16% Similarity=0.272 Sum_probs=109.9
Q ss_pred CCCceEEEEe-----ccccCCCCCceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCC
Q 048039 58 PMGSKATPVY-----VQQIPGLNTLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKG 132 (204)
Q Consensus 58 ~~g~~~~~~~-----~~~~P~l~~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~G 132 (204)
..++.+..+. ...+|+|+ ++.++++++.|+++.+|| |++|+|++||++|++++++++++ +.+++.|++|
T Consensus 20 se~G~i~~l~~f~~~s~~l~~l~--~~~l~~~~l~p~gl~~Ph-h~~A~ei~yV~~G~g~~g~V~~~---~~~~~~l~~G 93 (418)
T 3s7i_A 20 NQNGRIRVLQRFDQRSRQFQNLQ--NHRIVQIEAKPNTLVLPK-HADADNILVIQQGQATVTVANGN---NRKSFNLDEG 93 (418)
T ss_dssp CSSEEEEEECCHHHHCGGGGGGT--TCEEEEEEECTTEEEEEE-EESEEEEEEEEESEEEEEEECSS---CEEEEEEETT
T ss_pred cCCcEEEEecccCCcchhccccc--ceEEEEEEecCCceeeee-eCCCCeEEEEEEeeEEEEEEecC---CEEEEEecCC
Confidence 3456677663 24677777 456778999999999999 88999999999999999999874 4589999999
Q ss_pred cEEEECCCCeEEEEeCCCC-CEEEEEE-EcCCCCCceec--------ccccccCCCCCCHHHHHHhcCCCHHHHHHHH
Q 048039 133 DVFVFPMGLLHYQRNVGKV-NAVAIAA-LNSQNPGTSSI--------APALFTSKPVLNDEIISKTFLFDKKNVAILR 200 (204)
Q Consensus 133 d~~~~p~g~~H~~~N~g~~-~a~~i~~-~~s~~pg~~~~--------~~~~f~~~p~~~~~vl~~~f~~~~~~v~~l~ 200 (204)
|+++||+|++||+.|.|+. .++++++ .++++||.+.. ..++|+. +|++||+++|+++.+++++|+
T Consensus 94 Dv~~~P~G~~h~~~N~g~~~~l~i~~l~~~s~~pg~~~~f~laG~~~~~s~~~g---f~~evLa~af~v~~~~v~kl~ 168 (418)
T 3s7i_A 94 HALRIPSGFISYILNRHDNQNLRVAKISMPVNTPGQFEDFFPASSRDQSSYLQG---FSRNTLEAAFNAEFNEIRRVL 168 (418)
T ss_dssp EEEEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEECSSCCSSCCCGGGG---SCHHHHHHHHTSCHHHHHHHT
T ss_pred CEEEECCCCeEEEEecCCCccEEEEEeecCcCCCCccceeeccCCcchhHHhhc---CCHHHHHHHHCcCHHHHHhhh
Confidence 9999999999999998764 5566553 46778886433 2368875 999999999999999999997
No 26
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.84 E-value=7.8e-21 Score=172.55 Aligned_cols=138 Identities=22% Similarity=0.369 Sum_probs=115.4
Q ss_pred eEEEEeccccCCCCCceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCC----------------C---
Q 048039 62 KATPVYVQQIPGLNTLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPD----------------Y--- 122 (204)
Q Consensus 62 ~~~~~~~~~~P~l~~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~----------------~--- 122 (204)
.+++++....|.|++.++++++++|.||++.+||||+. .|++||++|++.++++.++.. .
T Consensus 28 G~~e~~~~~~~~l~~~gv~~~r~~i~pggl~~Ph~~~~-~~i~yV~~G~g~vg~v~pgc~et~~~~~~~~~~~~~~~~~~ 106 (493)
T 2d5f_A 28 GLIETWNSQHPELQCAGVTVSKRTLNRNGLHLPSYSPY-PQMIIVVQGKGAIGFAFPGCPETFEKPQQQSSRRGSRSQQQ 106 (493)
T ss_dssp EEEEECCTTSHHHHHHTCEEEEEEECTTEEEEEEECSS-CEEEEEEECEEEEEECCTTCCCCEEECC-------------
T ss_pred cEEEEeCCCChhhccCCEEEEEEEeCCCcEeCceecCC-CeEEEEEeCEEEEEEEeCCCccccccccccccccccccccc
Confidence 36677888889999999999999999999999999985 899999999999999964310 0
Q ss_pred ----ceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEEEEcCCCC--------Cceecc--------------------
Q 048039 123 ----RHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIAALNSQNP--------GTSSIA-------------------- 170 (204)
Q Consensus 123 ----~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~~~~s~~p--------g~~~~~-------------------- 170 (204)
..+.+.|++||+|+||+|++||+.|.|+++++++++++..+. ..+.++
T Consensus 107 ~~d~~qkv~~l~~GDvi~iPaG~~h~~~N~g~~~l~~v~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~~~ 186 (493)
T 2d5f_A 107 LQDSHQKIRHFNEGDVLVIPPGVPYWTYNTGDEPVVAISLLDTSNFNNQLDQNPRVFYLAGNPDIEHPETMQQQQQQKSH 186 (493)
T ss_dssp CSEEESCEEEEETTEEEEECTTCCEEEEECSSSCEEEEEEECTTCTTCCSCSSCCCEESSSCCCCSCGGGTC--------
T ss_pred cccccceEEEecCCCEEEECCCCcEEEEeCCCCCEEEEEEecCcCcccccccccceeeccCCccccchhhhhhccccccc
Confidence 014679999999999999999999999999999999974322 223332
Q ss_pred ---------------cccccCCCCCCHHHHHHhcCCCHHHHHHHHhcC
Q 048039 171 ---------------PALFTSKPVLNDEIISKTFLFDKKNVAILRSKF 203 (204)
Q Consensus 171 ---------------~~~f~~~p~~~~~vl~~~f~~~~~~v~~l~~~~ 203 (204)
.++|+. +++++|+++|+++.+++++|++..
T Consensus 187 ~~~~~~~~~~~~~~~~nif~g---f~~e~La~aF~v~~~~v~kl~~~~ 231 (493)
T 2d5f_A 187 GGRKQGQHQQQEEEGGSVLSG---FSKHFLAQSFNTNEDTAEKLRSPD 231 (493)
T ss_dssp -------------CCCCGGGG---SCHHHHHHHTTCCHHHHHHTTCTT
T ss_pred ccccccccccccccccchhhc---CCHHHHHhHhCCCHHHHHHhhhcc
Confidence 478875 999999999999999999998653
No 27
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.83 E-value=9.1e-20 Score=158.84 Aligned_cols=149 Identities=18% Similarity=0.211 Sum_probs=124.3
Q ss_pred CcEEeccCCCCCCCCCCCceEEEEeccccCCCCCceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCC
Q 048039 43 DFYFTGLDKQGNFSNPMGSKATPVYVQQIPGLNTLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDY 122 (204)
Q Consensus 43 df~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~ 122 (204)
.+.|+....++. ...|+.++.+....+|.+. ++++.++++.||+..++|||+++.|++||++|++++++++++ +
T Consensus 20 ~~~~~~~~~~~~--~~~~G~~~~~~~~~~p~~~--~~~~~~~~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~--g 93 (361)
T 2vqa_A 20 AFTYAFSKTPLV--LYDGGTTKQVGTYNFPVSK--GMAGVYMSLEPGAIRELHWHANAAEWAYVMEGRTRITLTSPE--G 93 (361)
T ss_dssp CSEECGGGSCCE--EETTEEEEEESTTTCTTCC--SCEEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECTT--S
T ss_pred ceEEEcccCCce--ecCCceEEEeChhhCcccc--ceeeEEEEEcCCCCCCceeCCCCCEEEEEEEeEEEEEEEeCC--C
Confidence 477887666543 3468888889888999876 468889999999999999999679999999999999998654 3
Q ss_pred ceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEEEEcCCCCC---ceecccccccCCCCCCHHHHHHhcCCCHHHHHHH
Q 048039 123 RHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIAALNSQNPG---TSSIAPALFTSKPVLNDEIISKTFLFDKKNVAIL 199 (204)
Q Consensus 123 ~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~~~~s~~pg---~~~~~~~~f~~~p~~~~~vl~~~f~~~~~~v~~l 199 (204)
+.+.+.|++||+++||+|.+|++.|.++++++++++++..++. .+... ++|+. +|.++|+++|+++.+.+++|
T Consensus 94 ~~~~~~l~~GD~~~ip~g~~H~~~n~~~~~~~~l~v~~~~~~~~~~~~~~~-~~~~~---~p~~vLa~~~~v~~~~~~~l 169 (361)
T 2vqa_A 94 KVEIADVDKGGLWYFPRGWGHSIEGIGPDTAKFLLVFNDGTFSEGATFSVT-DWLSH---TPIAWVEENLGWTAAQVAQL 169 (361)
T ss_dssp CEEEEEEETTEEEEECTTCEEEEEECSSSCEEEEEEESSTTCCTTSSEEHH-HHHHT---SCHHHHHHHHTCCHHHHTTS
T ss_pred cEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEECCCCccccceecHh-HHHHh---CCHHHHHHHhCcCHHHHHhc
Confidence 3357999999999999999999999999999999999877664 34443 55664 99999999999999999887
Q ss_pred Hh
Q 048039 200 RS 201 (204)
Q Consensus 200 ~~ 201 (204)
++
T Consensus 170 ~~ 171 (361)
T 2vqa_A 170 PK 171 (361)
T ss_dssp CS
T ss_pred cc
Confidence 64
No 28
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=99.83 E-value=2.7e-20 Score=167.49 Aligned_cols=135 Identities=19% Similarity=0.276 Sum_probs=111.6
Q ss_pred EEEEeccccCCCCCceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCc-------------------
Q 048039 63 ATPVYVQQIPGLNTLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYR------------------- 123 (204)
Q Consensus 63 ~~~~~~~~~P~l~~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~------------------- 123 (204)
.+.++...-|+|+++|++++++++.|+++.+||+|+ +.|++||++|+++++++.++-...
T Consensus 27 ~~e~w~~~~~~L~~~gvs~~r~~i~p~Gl~lPh~~~-a~e~~~V~~G~g~~G~v~pgc~et~~~~~~~~~~~~~~~~~~~ 105 (466)
T 3kgl_A 27 RIEVWDHHAPQLRCSGVSFVRYIIESKGLYLPSFFS-TAKLSFVAKGEGLMGRVVPGCAETFQDSSVFQPGGGSPFGEGQ 105 (466)
T ss_dssp EEEECCTTSHHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEEECTTCCCCEEECCSSCCCC--------
T ss_pred EEEEECCCChhhccCCeEEEEEEECCCCEeCCeeCC-CCeEEEEEeCeEEEEEecCCCcchhhccccccccccccccccc
Confidence 344455566999999999999999999999999998 799999999999999997620000
Q ss_pred --------------------------------------eeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEEEEcCCCC-
Q 048039 124 --------------------------------------HFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIAALNSQNP- 164 (204)
Q Consensus 124 --------------------------------------~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~~~~s~~p- 164 (204)
-+...|++||+++||+|++||+.|.|++++++++++...+.
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~l~~GDvi~iPaG~~~~~~N~g~e~L~~l~~~d~~n~~ 185 (466)
T 3kgl_A 106 GQGQQGQGQGHQGQGQGQQGQQGQQGQQSQGQGFRDMHQKVEHIRTGDTIATHPGVAQWFYNDGNQPLVIVSVLDLASHQ 185 (466)
T ss_dssp ---------------------------------CCEEESCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEEESSSTT
T ss_pred cccccccccccccccccccccccccccccccccccccceeeccccCCCEEEECCCCcEEEEeCCCCcEEEEEEEcCCCcc
Confidence 01258999999999999999999999999999999975443
Q ss_pred -------Cceecc------------------cccccCCCCCCHHHHHHhcCCCHHHHHHHHh
Q 048039 165 -------GTSSIA------------------PALFTSKPVLNDEIISKTFLFDKKNVAILRS 201 (204)
Q Consensus 165 -------g~~~~~------------------~~~f~~~p~~~~~vl~~~f~~~~~~v~~l~~ 201 (204)
..+.++ .++|+. ++.++|+++|+++.+++++|++
T Consensus 186 nQld~~~~~F~LaG~~~~~~~~~~~~~~~~~~ni~sG---F~~e~La~Af~v~~e~~~kL~~ 244 (466)
T 3kgl_A 186 NQLDRNPRPFYLAGNNPQGQVWIEGREQQPQKNILNG---FTPEVLAKAFKIDVRTAQQLQN 244 (466)
T ss_dssp CCSCSSCCEEESSCCBTTCCTTSTTCTTCCBCCGGGG---SCHHHHHHHHTSCHHHHHHHTC
T ss_pred cccCCceeeeEecCCCccccccccccccccCCCcccc---CCHHHHHHHhCCCHHHHHHHhc
Confidence 223443 378874 9999999999999999999974
No 29
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=99.82 E-value=3.7e-20 Score=168.25 Aligned_cols=137 Identities=19% Similarity=0.310 Sum_probs=114.6
Q ss_pred ceEEEEeccccCCCCCceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCC----------Cc-------
Q 048039 61 SKATPVYVQQIPGLNTLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPD----------YR------- 123 (204)
Q Consensus 61 ~~~~~~~~~~~P~l~~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~----------~~------- 123 (204)
+.+++++....|.|++.|+++++++|.||+..+||||+ +.|++||++|++.++++.++.- ++
T Consensus 30 ~G~~e~~~~~~~~l~~~gvs~~r~~i~p~gl~lPh~~~-a~~~~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~~~ 108 (510)
T 3c3v_A 30 GGYIETWNPNNQEFECAGVALSRLVLRRNALRRPFYSN-APQEIFIQQGRGYFGLIFPGCPSTYEEPAQQGRRYQSQRPP 108 (510)
T ss_dssp TEEEEECCTTSHHHHHHTCEEEEEEECTTEEEEEEECS-SCEEEEEEECCEEEEEECTTCCCCEEEECCC----------
T ss_pred CceEEEeCCCCcccccCcEEEEEEEECCCCCccceecC-CCeEEEEEeCEEEEEEEeCCCcccccccccccccccccccc
Confidence 34677788888999999999999999999999999998 5999999999999999975310 00
Q ss_pred ----------------eeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEEEEcCCCC--------Cceecc---------
Q 048039 124 ----------------HFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIAALNSQNP--------GTSSIA--------- 170 (204)
Q Consensus 124 ----------------~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~~~~s~~p--------g~~~~~--------- 170 (204)
.+.+.|++||+|+||+|++||+.|.|++++++|++++..++ ..+.++
T Consensus 109 ~~~~~~~~~~~~~d~~qkv~~v~~GDvi~iPaG~~hw~~N~g~~~l~~v~~~d~~n~~nqld~~~r~F~LaG~~~~~~~~ 188 (510)
T 3c3v_A 109 RRLQEEDQSQQQQDSHQKVHRFNEGDLIAVPTGVAFWLYNDHDTDVVAVSLTDTNNNDNQLDQFPRRFNLAGNHEQEFLR 188 (510)
T ss_dssp ----------CEEEEESCCEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTBTTCCSCSCCCCEESSCCCCCTTGG
T ss_pred ccccccccccccccccceEEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEeCCCCcccccccccceeEecCCcccccch
Confidence 02478999999999999999999999999999999976543 222222
Q ss_pred ---------------------------------------------------cccccCCCCCCHHHHHHhcCCC-HHHHHH
Q 048039 171 ---------------------------------------------------PALFTSKPVLNDEIISKTFLFD-KKNVAI 198 (204)
Q Consensus 171 ---------------------------------------------------~~~f~~~p~~~~~vl~~~f~~~-~~~v~~ 198 (204)
.++|+. ++.++|+++|+++ .+++++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~sg---F~~~~La~af~v~~~~~~~~ 265 (510)
T 3c3v_A 189 YQQQSRQSRRRSLPYSPYSPQSQPRQEEREFSPRGQHSRRERAGQEEEHEGGNIFSG---FTPEFLAQAFQVDDRQIVQN 265 (510)
T ss_dssp GCC------------------------------------------------CCTGGG---SCHHHHHHHHTCCCHHHHHH
T ss_pred hhhccccccccccccccccccccccccccccccccccccccccccccccccccceec---CCHHHHHHHhCCCHHHHHHH
Confidence 358874 9999999999999 999999
Q ss_pred HHh
Q 048039 199 LRS 201 (204)
Q Consensus 199 l~~ 201 (204)
|++
T Consensus 266 l~~ 268 (510)
T 3c3v_A 266 LRG 268 (510)
T ss_dssp HTT
T ss_pred hhc
Confidence 975
No 30
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=99.81 E-value=1.2e-19 Score=164.53 Aligned_cols=136 Identities=15% Similarity=0.335 Sum_probs=114.3
Q ss_pred eEEEEeccccCCCCCceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecC-CC-------------------
Q 048039 62 KATPVYVQQIPGLNTLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTA-PD------------------- 121 (204)
Q Consensus 62 ~~~~~~~~~~P~l~~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~-~~------------------- 121 (204)
.+++++...+|+|+++|++++|++|.|+++++||+|+ +.|++||++|++.++++.++ ++
T Consensus 31 G~~e~w~~~~p~l~~~Gvs~~R~~i~p~Gl~lPh~~~-a~el~yV~qG~g~~G~v~Pgcpet~~~~~~~~~~~~~~~~~~ 109 (531)
T 3fz3_A 31 GQIETWNFNQGDFQCAGVAASRITIQRNGLHLPSYSN-APQLIYIVQGRGVLGAVFSGCPETFEESQQSSQQGRQQEQEQ 109 (531)
T ss_dssp EEEEECCTTSHHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEECCTTCCCCEECCCC------------
T ss_pred ceEEEeCCCChhhccCcceEEEEEecCCCEeCCccCC-CCeEEEEEECcEEEEEEcCCCccccccccccccccccccccc
Confidence 3677788889999999999999999999999999998 79999999999999998763 10
Q ss_pred ----------------------------------------------------------C-ceeEEEeCCCcEEEECCCCe
Q 048039 122 ----------------------------------------------------------Y-RHFSKILNKGDVFVFPMGLL 142 (204)
Q Consensus 122 ----------------------------------------------------------~-~~~~~~L~~Gd~~~~p~g~~ 142 (204)
+ .-+.+.+++||++.+|+|+.
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~vr~GDviaiPaG~~ 189 (531)
T 3fz3_A 110 ERQQQQQGEQGRQQGQQEQQQERQGRQQGRQQQEEGRQQEQQQGQQGRPQQQQQFRQLDRHQKTRRIREGDVVAIPAGVA 189 (531)
T ss_dssp -------------------------------------------------------CCSCEESCCEEEETTEEEEECTTCC
T ss_pred cccccccccccccccccccccccccccccchhccccccccccccccccccccccccccccceeeecccCCcEEEECCCCe
Confidence 0 01256889999999999999
Q ss_pred EEEEeCCCCCEEEEEEEcCCCC--------Cceec-------------------------------------------cc
Q 048039 143 HYQRNVGKVNAVAIAALNSQNP--------GTSSI-------------------------------------------AP 171 (204)
Q Consensus 143 H~~~N~g~~~a~~i~~~~s~~p--------g~~~~-------------------------------------------~~ 171 (204)
||+.|.|++++++++++...|. ..+.+ ..
T Consensus 190 ~w~yN~G~~~l~iv~~~Dt~n~~NQld~~~r~F~LAGn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (531)
T 3fz3_A 190 YWSYNDGDQELVAVNLFHVSSDHNQLDQNPRKFYLAGNPENEFNQQGQSQPRQQGEQGRPGQHQQPFGRPRQQEQQGNGN 269 (531)
T ss_dssp EEEECCSSSCEEEEEEEETTCTTCCSCSSCCEEESSSCCCCTTCC--------------------------------CCS
T ss_pred EEEEeCCCceEEEEEEEccccccccCCCccceeEEcCCCcccccccccccccccccccccccccccccccchhhhcccCC
Confidence 9999999999999999964332 11222 14
Q ss_pred ccccCCCCCCHHHHHHhcCCCHHHHHHHHh
Q 048039 172 ALFTSKPVLNDEIISKTFLFDKKNVAILRS 201 (204)
Q Consensus 172 ~~f~~~p~~~~~vl~~~f~~~~~~v~~l~~ 201 (204)
++|+. ++.++|+.||+++.++++||++
T Consensus 270 nifsG---Fs~e~La~A~~v~~~~a~kLq~ 296 (531)
T 3fz3_A 270 NVFSG---FNTQLLAQALNVNEETARNLQG 296 (531)
T ss_dssp SGGGG---SCHHHHHHHHTSCHHHHHHHHT
T ss_pred Ceeec---CCHHHHHHHHCCCHHHHHHHhc
Confidence 78985 9999999999999999999985
No 31
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=99.81 E-value=6.6e-19 Score=154.87 Aligned_cols=153 Identities=16% Similarity=0.222 Sum_probs=125.0
Q ss_pred CCCCcEEeccCCCCCCCCCCCceEEEEeccccCCCCCceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecC
Q 048039 40 HADDFYFTGLDKQGNFSNPMGSKATPVYVQQIPGLNTLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTA 119 (204)
Q Consensus 40 ~~~df~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~ 119 (204)
....|+++....++ . ...++.++.+....++..+ ++++.+++++||+..++|||+.+.|++||++|++++.+++.+
T Consensus 222 ~~~~~v~~~~~~~~-~-~~~~g~~~~~~~~~~~~~~--~~~~~~~~l~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~~~ 297 (385)
T 1j58_A 222 VPYPFTYRLLEQEP-I-ESEGGKVYIADSTNFKVSK--TIASALVTVEPGAMRELHWHPNTHEWQYYISGKARMTVFASD 297 (385)
T ss_dssp CSSCSEEEGGGSCC-E-ECSSEEEEEESTTTSTTCC--SCEEEEEEECTTCEEEEEECSSSCEEEEEEESEEEEEEEEET
T ss_pred CCCCeeeecccCCC-e-eCCCceEEEeecccCCccc--ceEEEEEEECCCcccCceeCCCCCEEEEEEeCeEEEEEEcCC
Confidence 34567777765554 2 2345666766666666533 578999999999999999999879999999999999997544
Q ss_pred CCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEEEEcCCCCCceecccccccCCCCCCHHHHHHhcCCCHHHHHHH
Q 048039 120 PDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIAALNSQNPGTSSIAPALFTSKPVLNDEIISKTFLFDKKNVAIL 199 (204)
Q Consensus 120 ~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~~~~s~~pg~~~~~~~~f~~~p~~~~~vl~~~f~~~~~~v~~l 199 (204)
++.+++.|++||++++|++..|++.|.+++++++++++....+....+..++ +. +++++++.+|+++++++++|
T Consensus 298 --g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~v~~~~~~~d~~~~~~l-~~---~~~~v~~~~f~~~~~~~~~l 371 (385)
T 1j58_A 298 --GHARTFNYQAGDVGYVPFAMGHYVENIGDEPLVFLEIFKDDHYADVSLNQWL-AM---LPETFVQAHLDLGKDFTDVL 371 (385)
T ss_dssp --TEEEEEEEESSCEEEECTTCBEEEEECSSSCEEEEEEESSSSCCCEEHHHHH-HT---SCHHHHHHHHTCCHHHHTTC
T ss_pred --CcEEEEEEcCCCEEEECCCCeEEEEECCCCCEEEEEEECCCCccccCHHHHH-Hh---CCHHHHHHHhCCCHHHHHhh
Confidence 3236899999999999999999999999999999999988777776666554 54 99999999999999999999
Q ss_pred Hhc
Q 048039 200 RSK 202 (204)
Q Consensus 200 ~~~ 202 (204)
++.
T Consensus 372 ~~~ 374 (385)
T 1j58_A 372 SKE 374 (385)
T ss_dssp CSS
T ss_pred hcc
Confidence 764
No 32
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=99.74 E-value=3.5e-18 Score=150.24 Aligned_cols=147 Identities=21% Similarity=0.312 Sum_probs=121.1
Q ss_pred cEEeccCCCCCCCCCCCceEEEEeccccCCCCCceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCc
Q 048039 44 FYFTGLDKQGNFSNPMGSKATPVYVQQIPGLNTLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYR 123 (204)
Q Consensus 44 f~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~ 123 (204)
++|+....+.. ...|++++.+....+|.++ ++++.++++.||+..++|||+ +.|++||++|++++.+++.+ ++
T Consensus 48 ~~~~~~~~~~~--~~~~G~~~~~~~~~lp~~~--~~~~~~~~l~pg~~~~~H~H~-~~E~~~Vl~G~~~~~~~~~~--g~ 120 (385)
T 1j58_A 48 MKFSFSDTHNR--LEKGGYAREVTVRELPISE--NLASVNMRLKPGAIRELHWHK-EAEWAYMIYGSARVTIVDEK--GR 120 (385)
T ss_dssp CEECGGGSCCE--EETTEEEEEECTTTCTTCS--SCEEEEEEECTTCEEEEEEES-SCEEEEEEEEEEEEEEECTT--SC
T ss_pred eEEEcccCCcc--ccCCcEEEEeccccCcccC--ceEEEEEEECCCCCCCCccCC-hheEEEEEeeeEEEEEEeCC--Cc
Confidence 77877655553 2468889999999999877 678999999999999999999 59999999999999998654 43
Q ss_pred eeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEEEEcCCCCCcee--cccccccCCCCCCHHHHHHhcCCCHHHHHHHHh
Q 048039 124 HFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIAALNSQNPGTSS--IAPALFTSKPVLNDEIISKTFLFDKKNVAILRS 201 (204)
Q Consensus 124 ~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~~~~s~~pg~~~--~~~~~f~~~p~~~~~vl~~~f~~~~~~v~~l~~ 201 (204)
...+.|++||++++|+|..|++.|.+ ++++++.+++...+.... ...++|+. +|.++|+++|+++.+++++|++
T Consensus 121 ~~~~~l~~GD~~~ip~g~~H~~~n~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~---~p~evla~~~~vs~~~~~~l~~ 196 (385)
T 1j58_A 121 SFIDDVGEGDLWYFPSGLPHSIQALE-EGAEFLLVFDDGSFSENSTFQLTDWLAH---TPKEVIAANFGVTKEEISNLPG 196 (385)
T ss_dssp EEEEEEETTEEEEECTTCCEEEEEEE-EEEEEEEEESCTTCCGGGEEEHHHHHHT---SCHHHHHHHHTCCTGGGTTSCS
T ss_pred EEEEEeCCCCEEEECCCCeEEEEECC-CCEEEEEEECCCCccccchhhhhhhhhc---ccHHHHHHHhCCCHHHHHhccc
Confidence 23679999999999999999999987 468999989877665432 12466675 9999999999999988887753
No 33
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=99.68 E-value=2.8e-17 Score=114.33 Aligned_cols=74 Identities=23% Similarity=0.310 Sum_probs=68.4
Q ss_pred EEeccCCCCCCCCCCCceEEEEeccccCCCCCceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecC
Q 048039 45 YFTGLDKQGNFSNPMGSKATPVYVQQIPGLNTLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTA 119 (204)
Q Consensus 45 ~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~ 119 (204)
.|+++.+.+.++|..|. ++.++..++|+|+++++++.|+++.||++.+||||++|.|++||++|++++++++++
T Consensus 3 pfnl~~~~p~~~n~~G~-~~~~~~~~~P~Ln~lgls~~r~~l~~gg~~~PH~hprA~ei~~V~~G~~~v~~V~~~ 76 (79)
T 1dgw_X 3 PFNLRSRDPIYSNNYGK-LYEITPEKNSQLRDLDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGLE 76 (79)
T ss_dssp CEETTSSCCSEECSSEE-EEEECTTTCHHHHTTTEEEEEEEECTTCEEEEEEESSCEEEEEEEESCEEEEEEEEC
T ss_pred ccccccCCCCccCCCCc-EEEEChhhCcccCcCCcceEEEEEcCCcCcCCccCCCCcEEEEEEeceEEEEEecCC
Confidence 37888888888877776 589999999999999999999999999999999999999999999999999999765
No 34
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=99.61 E-value=3.8e-15 Score=110.58 Aligned_cols=84 Identities=20% Similarity=0.239 Sum_probs=73.5
Q ss_pred eEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEE
Q 048039 78 GLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIA 157 (204)
Q Consensus 78 g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~ 157 (204)
++.+.+++++||+..++|+|+...|++||++|++++.+.+ + +.+.|++||++++|+|.+|++.|.+++++++++
T Consensus 38 ~~~~~~~~~~pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~~----~--~~~~l~~Gd~~~i~~~~~H~~~n~~~~~~~~l~ 111 (125)
T 3h8u_A 38 DSVVVVWHAHPGQEIASHVHPHGQDTWTVISGEAEYHQGN----G--IVTHLKAGDIAIAKPGQVHGAMNSGPEPFIFVS 111 (125)
T ss_dssp SCEEEEEEECTTCEECCC-CTTCEEEEEEEECEEEEECST----T--CEEEEETTEEEEECTTCCCEEEECSSSCEEEEE
T ss_pred CEEEEEEEECCCCcCCcccCCCCeEEEEEEEeEEEEEECC----C--eEEEeCCCCEEEECCCCEEEeEeCCCCCEEEEE
Confidence 4678889999999999999997699999999999998721 3 589999999999999999999999999999999
Q ss_pred EEcCCCCCce
Q 048039 158 ALNSQNPGTS 167 (204)
Q Consensus 158 ~~~s~~pg~~ 167 (204)
++....+++.
T Consensus 112 v~~p~~~~~~ 121 (125)
T 3h8u_A 112 VVAPGNAGFA 121 (125)
T ss_dssp EEESTTCCCC
T ss_pred EECCCcccch
Confidence 9887666553
No 35
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=99.57 E-value=6.2e-14 Score=110.25 Aligned_cols=118 Identities=13% Similarity=0.194 Sum_probs=90.2
Q ss_pred CCCCCCCCcEEeccCCCC---CCCCCCCceEEEEeccccCCCCCceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEE
Q 048039 36 PKTAHADDFYFTGLDKQG---NFSNPMGSKATPVYVQQIPGLNTLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLE 112 (204)
Q Consensus 36 ~~~~~~~df~~~~~~~~~---~~~~~~g~~~~~~~~~~~P~l~~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~ 112 (204)
+..+..+++.|....... ......|...+.+..... +.....+.+.+++++||+..++|+|+. .|++||++|+++
T Consensus 11 ~~iv~~~~~~W~~~~~~~~~~~~~~~~g~~~~~L~~~~~-g~~~~~~~~~~~~l~pG~~~~~H~H~~-~E~~~Vl~G~~~ 88 (167)
T 3ibm_A 11 SRVLRERDYRWEGTEEEAYKAEGTHFSGARRQTLVGRPA-GQEAPAFETRYFEVEPGGYTTLERHEH-THVVMVVRGHAE 88 (167)
T ss_dssp CEEECEETTEETTCCCC---------CCEEEEEEECTTT-TCCSSSEEEEEEEECTTCBCCCBBCSS-CEEEEEEESEEE
T ss_pred CceeecCCcccccceeeeccCCCCcCCCcEEEEEECCCC-CCCCCcEEEEEEEECCCCCCCCccCCC-cEEEEEEeCEEE
Confidence 356688899999754321 111234555555443332 212346888999999999999999985 999999999999
Q ss_pred EEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCC-CCCEEEEEEEcCC
Q 048039 113 VGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVG-KVNAVAIAALNSQ 162 (204)
Q Consensus 113 ~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g-~~~a~~i~~~~s~ 162 (204)
+.++ + +.+.|++||++++|+|.+|++.|.+ ++++++++++...
T Consensus 89 ~~i~-----~--~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~~ 132 (167)
T 3ibm_A 89 VVLD-----D--RVEPLTPLDCVYIAPHAWHQIHATGANEPLGFLCIVDSD 132 (167)
T ss_dssp EEET-----T--EEEEECTTCEEEECTTCCEEEEEESSSCCEEEEEEEESS
T ss_pred EEEC-----C--EEEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEeCC
Confidence 9985 3 5999999999999999999999999 9999999988744
No 36
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=99.56 E-value=4.8e-14 Score=109.70 Aligned_cols=85 Identities=14% Similarity=0.161 Sum_probs=72.0
Q ss_pred eEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCC--CCceeEEEeCCCcEEEECCCCeEEEEeCC-CCCEE
Q 048039 78 GLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAP--DYRHFSKILNKGDVFVFPMGLLHYQRNVG-KVNAV 154 (204)
Q Consensus 78 g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~--~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g-~~~a~ 154 (204)
.+.+.+++++||+..++|+|+. .|++||++|++++.+.+..+ +++.+.+.|++||++++|+|.+|++.|.+ +++++
T Consensus 40 ~~~~~~~~~~pg~~~~~H~H~~-~E~~~Vl~G~~~~~~~~~~~~~~~~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~ 118 (163)
T 1lr5_A 40 EVEVWLQTISPGQRTPIHRHSC-EEVFTVLKGKGTLLMGSSSLKYPGQPQEIPFFQNTTFSIPVNDPHQVWNSDEHEDLQ 118 (163)
T ss_dssp SEEEEEEEECTTCBCCEEEESS-CEEEEEEECCEEEEECCSSSSSCCSCEEEEECTTEEEEECTTCCEEEECCCSSSCEE
T ss_pred cEEEEEEEECCCCcCCCeECCC-CeEEEEEeCEEEEEECCccccccCccEEEEeCCCCEEEECCCCcEEeEeCCCCCCEE
Confidence 5788899999999999999986 99999999999999974110 01225899999999999999999999999 89999
Q ss_pred EEEEEcCCC
Q 048039 155 AIAALNSQN 163 (204)
Q Consensus 155 ~i~~~~s~~ 163 (204)
+++++....
T Consensus 119 ~l~i~~~~~ 127 (163)
T 1lr5_A 119 VLVIISRPP 127 (163)
T ss_dssp EEEEEESSS
T ss_pred EEEEECCCC
Confidence 999887543
No 37
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=99.56 E-value=2.1e-14 Score=102.54 Aligned_cols=77 Identities=18% Similarity=0.218 Sum_probs=68.2
Q ss_pred eEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEE
Q 048039 78 GLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIA 157 (204)
Q Consensus 78 g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~ 157 (204)
.+.+.+++++||+..++|.|+...|++||++|++++.+.+ +. +.+.|++||++++|+|.+|++.|.|+++++++.
T Consensus 17 ~~~~~~~~~~Pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~~----g~-~~~~l~~Gd~~~~p~~~~H~~~N~g~~~~~~l~ 91 (97)
T 2fqp_A 17 RVKVTEWRFPPGGETGWHRHSMDYVVVPMTTGPLLLETPE----GS-VTSQLTRGVSYTRPEGVEHNVINPSDTEFVFVE 91 (97)
T ss_dssp SEEEEEEEECTTCBCCSEECCSCEEEEESSCEEEEEEETT----EE-EEEEECTTCCEEECTTCEEEEECCSSSCEEEEE
T ss_pred eEEEEEEEECCCCCCCCEECCCCcEEEEEeecEEEEEeCC----CC-EEEEEcCCCEEEeCCCCcccCEeCCCCcEEEEE
Confidence 5788999999999999999998557999999999999852 11 489999999999999999999999999999987
Q ss_pred EE
Q 048039 158 AL 159 (204)
Q Consensus 158 ~~ 159 (204)
+-
T Consensus 92 v~ 93 (97)
T 2fqp_A 92 IE 93 (97)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 38
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=99.56 E-value=3.5e-14 Score=110.32 Aligned_cols=85 Identities=16% Similarity=0.170 Sum_probs=73.7
Q ss_pred eEEEEEEEECCCC-CCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCC-CeEEEEeCCCCCEEE
Q 048039 78 GLSMVRVDFAPDG-LNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMG-LLHYQRNVGKVNAVA 155 (204)
Q Consensus 78 g~s~~~~~i~pg~-~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g-~~H~~~N~g~~~a~~ 155 (204)
.+.+.+++++||+ ..++|||+...|++||++|++++.+. + +.+.|++||++++|+| ..|++.|.+++++++
T Consensus 45 ~~~~~~~~l~pg~~~~~~H~H~~~~E~~~Vl~G~~~~~~~-----~--~~~~l~~Gd~i~i~~~~~~H~~~n~~~~~~~~ 117 (162)
T 3l2h_A 45 HMGIHLIQIEPGKESTEYHLHHYEEEAVYVLSGKGTLTME-----N--DQYPIAPGDFVGFPCHAAAHSISNDGTETLVC 117 (162)
T ss_dssp SEEEEEEEECTTCBSSSSBEESSCCEEEEEEESCEEEEET-----T--EEEEECTTCEEEECTTSCCEEEECCSSSCEEE
T ss_pred eEEEEEEEECCCCcCCCCccCCCCCEEEEEEEEEEEEEEC-----C--EEEEeCCCCEEEECCCCceEEeEeCCCCCEEE
Confidence 5788999999999 58999996669999999999999985 3 5899999999999998 999999999999999
Q ss_pred EEEEcCCCCCceec
Q 048039 156 IAALNSQNPGTSSI 169 (204)
Q Consensus 156 i~~~~s~~pg~~~~ 169 (204)
+++.....+....+
T Consensus 118 l~v~~p~~~~~~~~ 131 (162)
T 3l2h_A 118 LVIGQRLDQDVVDY 131 (162)
T ss_dssp EEEEECCSEEEEEE
T ss_pred EEEECCCCCCeEec
Confidence 99887654433333
No 39
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=99.55 E-value=2e-14 Score=119.37 Aligned_cols=116 Identities=16% Similarity=0.109 Sum_probs=83.3
Q ss_pred CCCCcEEeccCCCCCCCCCCCceEEEEeccccCCCCCceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEE----
Q 048039 40 HADDFYFTGLDKQGNFSNPMGSKATPVYVQQIPGLNTLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGF---- 115 (204)
Q Consensus 40 ~~~df~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~---- 115 (204)
+.+||.+..+..+....++.|. +...-. +...+.++++.+++++||+..++|+|+...|++||++|++++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~PG~~~~~H~H~~~~E~~yVLeG~~~~~v~~~~ 83 (239)
T 2xlg_A 8 TFDDIPMPKLADPLLIYTPANE-IFDIAS---CSAKDIGFAIAHAQIPPGGGPMPHIHYFINEWFWTPEGGIELFHSTKQ 83 (239)
T ss_dssp BCSCCCCCCCSSCEEEECTTCC-EEEEEE---EEETTEEEEEEEEEECTTCSCCSEEESSEEEEEEETTCCCEEEEEEEE
T ss_pred chhhCCCccccccceeecCCce-EEEEec---cCCCCCCEEEEEEEECCCCcCCCeECCCccEEEEEEEeEEEEEEEecc
Confidence 4566655554433333334333 332221 22234478899999999999999999977999999999999988
Q ss_pred ----Eec-----CCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEE-EEEE
Q 048039 116 ----IGT-----APDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVA-IAAL 159 (204)
Q Consensus 116 ----~~~-----~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~-i~~~ 159 (204)
++. .++++...+.+++||++++|+|.+|.+.|.+++++++ +.++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~l~~GD~i~iP~g~~H~~~N~~~~~~~~~l~~~ 137 (239)
T 2xlg_A 84 YPNMDELPVVGGAGRGDLYSIQSEPKQLIYSPNHYMHGFVNPTDKTLPIVFVWM 137 (239)
T ss_dssp CCCTTSCCSTTTTCCEEEEEEECCTTEEEEECTTEEEEEECCSSSCEEEEEEEE
T ss_pred cccCCCcccccccccCceeEEEECCCCEEEECCCCCEEEEeCCCCCEEEEEEEE
Confidence 321 0011223899999999999999999999999999998 6666
No 40
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=99.53 E-value=6.8e-14 Score=99.33 Aligned_cols=77 Identities=19% Similarity=0.179 Sum_probs=69.8
Q ss_pred eEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEE
Q 048039 78 GLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIA 157 (204)
Q Consensus 78 g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~ 157 (204)
++.+.+++++||...++|+|+...|++||++|++++.+. + +.+.|++||++++|+|..|.+.|.+++++++++
T Consensus 27 ~~~~~~~~~~pg~~~~~H~H~~~~e~~~v~~G~~~~~~~-----~--~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~~~ 99 (105)
T 1v70_A 27 RMLYDLYALLPGQAQKVHVHEGSDKVYYALEGEVVVRVG-----E--EEALLAPGMAAFAPAGAPHGVRNESASPALLLV 99 (105)
T ss_dssp TEEEEEEEECTTCEEEEECCSSCEEEEEEEESCEEEEET-----T--EEEEECTTCEEEECTTSCEEEECCSSSCEEEEE
T ss_pred ceEEEEEEECCCCcCCccCCCCCcEEEEEEeCEEEEEEC-----C--EEEEeCCCCEEEECCCCcEEeEeCCCCCEEEEE
Confidence 578889999999999999998767999999999999884 3 589999999999999999999999999999998
Q ss_pred EEcC
Q 048039 158 ALNS 161 (204)
Q Consensus 158 ~~~s 161 (204)
++..
T Consensus 100 v~~p 103 (105)
T 1v70_A 100 VTAP 103 (105)
T ss_dssp EEES
T ss_pred EeCC
Confidence 8753
No 41
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=99.53 E-value=3.3e-14 Score=112.61 Aligned_cols=81 Identities=20% Similarity=0.199 Sum_probs=73.4
Q ss_pred ceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEE
Q 048039 77 LGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAI 156 (204)
Q Consensus 77 ~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i 156 (204)
.|..+.+++++||+..++|.|.. .|++||++|++++.+++ + +.+.|++||++ ||+|..|+++|.|+++++++
T Consensus 77 ~G~~~~~v~l~PG~~~~~H~H~~-eE~~~VLeGel~l~ld~----g--e~~~L~~GDsi-~~~g~~H~~~N~g~~~ar~l 148 (172)
T 3es1_A 77 GGSVIRVVDMLPGKESPMHRTNS-IDYGIVLEGEIELELDD----G--AKRTVRQGGII-VQRGTNHLWRNTTDKPCRIA 148 (172)
T ss_dssp CSEEEEEEEECTTCBCCCBCCSE-EEEEEEEESCEEEECGG----G--CEEEECTTCEE-EECSCCBEEECCSSSCEEEE
T ss_pred CCeEEEEEEECCCCCCCCeecCc-eEEEEEEeCEEEEEECC----C--eEEEECCCCEE-EeCCCcEEEEeCCCCCEEEE
Confidence 47889999999999999999986 89999999999999852 2 58999999999 99999999999999999999
Q ss_pred EEEcCCCCC
Q 048039 157 AALNSQNPG 165 (204)
Q Consensus 157 ~~~~s~~pg 165 (204)
+++....|-
T Consensus 149 ~V~~P~~p~ 157 (172)
T 3es1_A 149 FILIEAPAY 157 (172)
T ss_dssp EEEEECCCC
T ss_pred EEEcCCCce
Confidence 999877763
No 42
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=99.52 E-value=9.6e-14 Score=108.62 Aligned_cols=85 Identities=20% Similarity=0.147 Sum_probs=74.4
Q ss_pred eEEEEEEEECCCCCC-CCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCC--CeEEEEeCCCCCEE
Q 048039 78 GLSMVRVDFAPDGLN-PPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMG--LLHYQRNVGKVNAV 154 (204)
Q Consensus 78 g~s~~~~~i~pg~~~-ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g--~~H~~~N~g~~~a~ 154 (204)
.+.+.+++++||+.. ++|+|+..+|++||++|++++.+. + +.+.|++||++++|+| ..|++.|.++++++
T Consensus 42 ~~~~~~~~l~pG~~~~~~H~H~~~eE~~~Vl~G~~~~~~~-----~--~~~~l~~GD~i~ip~~~~~~H~~~n~~~~~~~ 114 (163)
T 3i7d_A 42 QFGVNLVRLEPGAKSSLRHYHMEQDEFVMVTEGALVLVDD-----Q--GEHPMVPGDCAAFPAGDPNGHQFVNRTDAPAT 114 (163)
T ss_dssp SEEEEEEEECTTCBSSSSEEESSCCEEEEEEESCEEEEET-----T--EEEEECTTCEEEECTTCCCCBEEECCSSSCEE
T ss_pred eEEEEEEEECCCCcCCCCccCCCCcEEEEEEECEEEEEEC-----C--EEEEeCCCCEEEECCCCCcceEEEECCCCCEE
Confidence 688899999999965 899998767999999999999985 3 5899999999999999 99999999999999
Q ss_pred EEEEEcCCCCCceec
Q 048039 155 AIAALNSQNPGTSSI 169 (204)
Q Consensus 155 ~i~~~~s~~pg~~~~ 169 (204)
++++..........+
T Consensus 115 ~l~v~~p~~~d~~~y 129 (163)
T 3i7d_A 115 FLVVGTRTPTETAYY 129 (163)
T ss_dssp EEEEEECCSCEEEEE
T ss_pred EEEEECCCCCCcccC
Confidence 999987665444433
No 43
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=99.50 E-value=1.6e-13 Score=103.78 Aligned_cols=81 Identities=17% Similarity=0.267 Sum_probs=72.8
Q ss_pred eEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEE--EEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEE
Q 048039 78 GLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVG--FIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVA 155 (204)
Q Consensus 78 g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~--~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~ 155 (204)
.+.+.+++++||+..++|+|+. .|++||++|++++. ++ + +.+.|++||++++|+|.+|.+.|.+++++++
T Consensus 38 ~~~~~~~~~~pg~~~~~H~H~~-~e~~~vl~G~~~~~~~~~-----~--~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~ 109 (145)
T 3ht1_A 38 RFVLTEFEVSPNGSTPPHFHEW-EHEIYVLEGSMGLVLPDQ-----G--RTEEVGPGEAIFIPRGEPHGFVTGPGQTCRF 109 (145)
T ss_dssp SEEEEEEEEEEEEECCCEECSS-CEEEEEEEECEEEEEGGG-----T--EEEEECTTCEEEECTTCCBEEECCTTCCEEE
T ss_pred cEEEEEEEECCCCcCCCccCCC-ceEEEEEEeEEEEEEeEC-----C--EEEEECCCCEEEECCCCeEEeEcCCCCCEEE
Confidence 6788899999999999999997 88899999999998 64 3 6999999999999999999999999999999
Q ss_pred EEEEcCCCCCc
Q 048039 156 IAALNSQNPGT 166 (204)
Q Consensus 156 i~~~~s~~pg~ 166 (204)
+.++....+..
T Consensus 110 l~i~~~~~~~~ 120 (145)
T 3ht1_A 110 LVVAPCERPPV 120 (145)
T ss_dssp EEEEESCCCCC
T ss_pred EEEECCCCCCe
Confidence 99987665554
No 44
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=99.50 E-value=1.3e-14 Score=104.52 Aligned_cols=77 Identities=16% Similarity=0.202 Sum_probs=67.7
Q ss_pred eEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEE
Q 048039 78 GLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIA 157 (204)
Q Consensus 78 g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~ 157 (204)
.+.+.|++++||+..++|+|+...|+++|++|++++...+ +......|++||++++|.|..|++.|.|++++++|.
T Consensus 16 ~~rV~r~~i~PG~~~~~H~H~~~~e~~~v~~G~~~v~~~d----~~~~~~~l~~G~~~~ip~G~~H~~~N~g~~pl~~Ie 91 (98)
T 3lag_A 16 EVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVAPD----GTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLE 91 (98)
T ss_dssp SEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEECTT----SCEECCCBCTTCCEEECTTCEEEEBCCSSSCEEEEE
T ss_pred eEEEEEEEECCCCccCcEECCCcEEEEEEeccEEEEEeCC----CceEEEEecCCcEEEEcCCCcEECEECCCCeEEEEE
Confidence 5789999999999999999998789999999999998753 332457799999999999999999999999999998
Q ss_pred E
Q 048039 158 A 158 (204)
Q Consensus 158 ~ 158 (204)
+
T Consensus 92 V 92 (98)
T 3lag_A 92 I 92 (98)
T ss_dssp E
T ss_pred E
Confidence 7
No 45
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=99.49 E-value=2.7e-13 Score=103.98 Aligned_cols=84 Identities=17% Similarity=0.164 Sum_probs=70.5
Q ss_pred eEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEE
Q 048039 78 GLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIA 157 (204)
Q Consensus 78 g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~ 157 (204)
.+.+.+++++||...++|+|+...|++||++|++++.+.+... .....+.|++||++++|+|.+|++.|.+++++++++
T Consensus 42 ~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~~~~~-~~~~~~~l~~Gd~i~ip~g~~H~~~n~~~~~~~~l~ 120 (148)
T 2oa2_A 42 HLQVTLMSIQVGEDIGLEIHPHLDQFLRVEEGRGLVQMGHRQD-NLHFQEEVFDDYAILIPAGTWHNVRNTGNRPLKLYS 120 (148)
T ss_dssp SCEEEEEEECTTCBCCCBCCTTCEEEEEEEESEEEEEEESBTT-BCCEEEEEETTCEEEECTTCEEEEEECSSSCEEEEE
T ss_pred ceEEEEEEECCCCccCceECCCCcEEEEEEeCEEEEEECCccc-cceeeEEECCCCEEEECCCCcEEEEECCCCCEEEEE
Confidence 5678889999999999999987679999999999999974210 000239999999999999999999999999999998
Q ss_pred EEcCC
Q 048039 158 ALNSQ 162 (204)
Q Consensus 158 ~~~s~ 162 (204)
++...
T Consensus 121 i~~~~ 125 (148)
T 2oa2_A 121 IYAPP 125 (148)
T ss_dssp EEESC
T ss_pred EECCC
Confidence 87643
No 46
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=99.48 E-value=3.4e-13 Score=97.31 Aligned_cols=77 Identities=17% Similarity=0.209 Sum_probs=69.5
Q ss_pred eEEEEEEEECCCCCCCCc--cCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEE
Q 048039 78 GLSMVRVDFAPDGLNPPH--THPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVA 155 (204)
Q Consensus 78 g~s~~~~~i~pg~~~ppH--~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~ 155 (204)
.+.+.+++++||...++| +|+...|++||++|++++.+. + +.+.|++||++++|+|..|.+.|.+++++++
T Consensus 20 ~~~~~~~~~~pg~~~~~h~~~H~~~~e~~~vl~G~~~~~~~-----~--~~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~ 92 (113)
T 2gu9_A 20 QVQAAEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAIVD-----G--HTQALQAGSLIAIERGQAHEIRNTGDTPLKT 92 (113)
T ss_dssp TEEEEEEEECTTCEEECCCSSSCCCEEEEEEEECCEEEEET-----T--EEEEECTTEEEEECTTCCEEEECCSSSCEEE
T ss_pred cEEEEEEEECCCCccCCcccccCCCcEEEEEEeCEEEEEEC-----C--EEEEeCCCCEEEECCCCcEEeEcCCCCCEEE
Confidence 578889999999988888 998559999999999999984 3 5899999999999999999999999999999
Q ss_pred EEEEcC
Q 048039 156 IAALNS 161 (204)
Q Consensus 156 i~~~~s 161 (204)
++++..
T Consensus 93 ~~v~~~ 98 (113)
T 2gu9_A 93 VNFYHP 98 (113)
T ss_dssp EEEEES
T ss_pred EEEECC
Confidence 988764
No 47
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=99.46 E-value=2.3e-12 Score=103.20 Aligned_cols=100 Identities=16% Similarity=0.136 Sum_probs=78.4
Q ss_pred CceEEEEeccccCCCCCceEEEEEEEECCCCC------CCCccCC--CCcEEEEEEeCcEEEEEEecCCCCceeEEEeCC
Q 048039 60 GSKATPVYVQQIPGLNTLGLSMVRVDFAPDGL------NPPHTHP--RASEIMTLLEGTLEVGFIGTAPDYRHFSKILNK 131 (204)
Q Consensus 60 g~~~~~~~~~~~P~l~~~g~s~~~~~i~pg~~------~ppH~H~--~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~ 131 (204)
+..+..+.....|.. ...+.+.+++++||+. .++|+|+ +..|++||++|++.+.+.+.. ++...+.|++
T Consensus 49 ~~~~~~v~~l~~~~~-~~~l~~~~~~l~PG~~~~E~~~~~~H~H~~~~~~E~~~Vl~G~~~~~i~~~~--g~~~~~~l~~ 125 (190)
T 1x82_A 49 DPVVYEVYAVEQEEK-EGDLNFATTVLYPGKVGKEFFFTKGHFHAKLDRAEVYVALKGKGGMLLQTPE--GDAKWISMEP 125 (190)
T ss_dssp CCEEEEEEEECCCSC-TTCEEEEEEEECCCEETTEECBCCCBBCSSTTCCEEEEEEESCEEEEEECTT--CCEEEEEECT
T ss_pred CceEEEEEEecCCCC-CCCeEEEEEEECCCcCCCcccCCCCeECCCCCCCEEEEEEcCEEEEEEcCcC--CcEEEEEECC
Confidence 344555432222332 2357888889999998 8899997 347999999999999998643 3345699999
Q ss_pred CcEEEECCCCeEEEEeCCCCCEEEEEEEcCC
Q 048039 132 GDVFVFPMGLLHYQRNVGKVNAVAIAALNSQ 162 (204)
Q Consensus 132 Gd~~~~p~g~~H~~~N~g~~~a~~i~~~~s~ 162 (204)
||++++|+|..|++.|.|++++++++++...
T Consensus 126 GD~v~ip~g~~H~~~N~g~~~~~~l~v~~~~ 156 (190)
T 1x82_A 126 GTVVYVPPYWAHRTVNIGDEPFIFLAIYPAD 156 (190)
T ss_dssp TCEEEECTTCEEEEEECSSSCEEEEEEEETT
T ss_pred CcEEEECCCCeEEEEECCcccEEEEEEECCC
Confidence 9999999999999999999999999987644
No 48
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=99.46 E-value=2.2e-13 Score=100.33 Aligned_cols=71 Identities=18% Similarity=0.293 Sum_probs=62.8
Q ss_pred eEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEE
Q 048039 78 GLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAI 156 (204)
Q Consensus 78 g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i 156 (204)
.+.+.+++++||...++|+|+. .|++||++|++++.+. + +.+.|++||++++|+|.+|.+.|.++....++
T Consensus 35 ~~~v~~~~l~~G~~~~~H~H~~-~e~~~Vl~G~~~~~i~-----~--~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~~ 105 (114)
T 3fjs_A 35 RLEVMRMVLPAGKQVGSHSVAG-PSTIQCLEGEVEIGVD-----G--AQRRLHQGDLLYLGAGAAHDVNAITNTSLLVT 105 (114)
T ss_dssp TEEEEEEEECTTCEEEEECCSS-CEEEEEEESCEEEEET-----T--EEEEECTTEEEEECTTCCEEEEESSSEEEEEE
T ss_pred CEEEEEEEECCCCccCceeCCC-cEEEEEEECEEEEEEC-----C--EEEEECCCCEEEECCCCcEEEEeCCCcEEEEE
Confidence 5789999999999999999997 8999999999999985 3 58999999999999999999999865444443
No 49
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=99.45 E-value=3e-13 Score=100.25 Aligned_cols=76 Identities=25% Similarity=0.443 Sum_probs=68.8
Q ss_pred eEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEE
Q 048039 78 GLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIA 157 (204)
Q Consensus 78 g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~ 157 (204)
++.+.+++++||...++|+|+. .|++||++|++++.+. + +.+.|++||++++|+|..|.+.|.++ +++++.
T Consensus 40 ~~~~~~~~~~pg~~~~~H~H~~-~e~~~vl~G~~~~~~~-----~--~~~~l~~Gd~~~ip~~~~H~~~~~~~-~~~~l~ 110 (126)
T 4e2g_A 40 NLMLNWVRIEPNTEMPAHEHPH-EQAGVMLEGTLELTIG-----E--ETRVLRPGMAYTIPGGVRHRARTFED-GCLVLD 110 (126)
T ss_dssp SCEEEEEEECTTCEEEEECCSS-EEEEEEEEECEEEEET-----T--EEEEECTTEEEEECTTCCEEEECCTT-CEEEEE
T ss_pred CeEEEEEEECCCCcCCCccCCC-ceEEEEEEeEEEEEEC-----C--EEEEeCCCCEEEECCCCcEEeEECCC-CEEEEE
Confidence 5788999999999999999997 9999999999999985 3 58999999999999999999999987 899988
Q ss_pred EEcCC
Q 048039 158 ALNSQ 162 (204)
Q Consensus 158 ~~~s~ 162 (204)
++...
T Consensus 111 v~~p~ 115 (126)
T 4e2g_A 111 IFSPP 115 (126)
T ss_dssp EEESC
T ss_pred EECCC
Confidence 87643
No 50
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=99.45 E-value=7.3e-13 Score=105.69 Aligned_cols=82 Identities=20% Similarity=0.191 Sum_probs=70.2
Q ss_pred CCCceEEEEEEEECCCCCCC---CccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeC-C
Q 048039 74 LNTLGLSMVRVDFAPDGLNP---PHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNV-G 149 (204)
Q Consensus 74 l~~~g~s~~~~~i~pg~~~p---pH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~-g 149 (204)
..+..+.+.+++++||+..+ +|+|++ .|++||++|++++.+++. +..+.+.|++||+++||++.+|.+.|. +
T Consensus 112 ~~~~~~~~~~~~~~pg~~~~~~~~h~h~~-~E~~~Vl~G~~~~~~~~~---~~~~~~~l~~GD~~~~~~~~~H~~~n~~~ 187 (198)
T 2bnm_A 112 KRAPSLVPLVVDVLTDNPDDAKFNSGHAG-NEFLFVLEGEIHMKWGDK---ENPKEALLPTGASMFVEEHVPHAFTAAKG 187 (198)
T ss_dssp TTSTTCEEEEEEECCCCGGGCCCCCCCSS-CEEEEEEESCEEEEESCT---TSCEEEEECTTCEEEECTTCCEEEEESTT
T ss_pred CCCCcceEEEEEEcCCCCCcccccccCCC-eEEEEEEeeeEEEEECCc---CCcccEEECCCCEEEeCCCCceEEEecCC
Confidence 33446889999999999765 799987 999999999999998631 122589999999999999999999999 9
Q ss_pred CCCEEEEEEE
Q 048039 150 KVNAVAIAAL 159 (204)
Q Consensus 150 ~~~a~~i~~~ 159 (204)
++++++++++
T Consensus 188 ~~~~~~l~v~ 197 (198)
T 2bnm_A 188 TGSAKLIAVN 197 (198)
T ss_dssp SCCEEEEEEE
T ss_pred CCCeEEEEEe
Confidence 9999999875
No 51
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=99.45 E-value=3.8e-13 Score=104.78 Aligned_cols=78 Identities=13% Similarity=0.069 Sum_probs=71.5
Q ss_pred ceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEE
Q 048039 77 LGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAI 156 (204)
Q Consensus 77 ~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i 156 (204)
..+.+.+++++||+..++|+|+. .|++||++|++++.++ + +.+.|++||++++|+|..|.+.|.++++++++
T Consensus 42 ~~~~~~~~~l~pG~~~~~H~H~~-~E~~~Vl~G~~~v~v~-----g--~~~~l~~Gd~i~ip~~~~H~~~n~g~~~~~~l 113 (156)
T 3kgz_A 42 LACEWRYFEVDEGGYSTLERHAH-VHAVMIHRGHGQCLVG-----E--TISDVAQGDLVFIPPMTWHQFRANRGDCLGFL 113 (156)
T ss_dssp CSEEEEEEEEEEEEECCCBBCSS-CEEEEEEEEEEEEEET-----T--EEEEEETTCEEEECTTCCEEEECCSSSCEEEE
T ss_pred CcEEEEEEEECCCCccCceeCCC-cEEEEEEeCEEEEEEC-----C--EEEEeCCCCEEEECCCCcEEeEeCCCCCEEEE
Confidence 46788889999999999999987 8999999999999985 3 69999999999999999999999999999999
Q ss_pred EEEcCC
Q 048039 157 AALNSQ 162 (204)
Q Consensus 157 ~~~~s~ 162 (204)
++++..
T Consensus 114 ~i~~~~ 119 (156)
T 3kgz_A 114 CVVNAA 119 (156)
T ss_dssp EEEESS
T ss_pred EEEeCC
Confidence 998754
No 52
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.45 E-value=4.8e-13 Score=100.90 Aligned_cols=77 Identities=21% Similarity=0.160 Sum_probs=69.3
Q ss_pred CceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEE
Q 048039 76 TLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVA 155 (204)
Q Consensus 76 ~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~ 155 (204)
+..+.+.+++++||+..++|+|++..|++||++|++++.+. + +.+.|++||++++|++.+|++.|.+++++++
T Consensus 54 ~~~~~~~~~~~~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~-----~--~~~~l~~Gd~i~i~~~~~H~~~n~~~~~~~~ 126 (133)
T 1o4t_A 54 NKARLFARMKLPPGSSVGLHKHEGEFEIYYILLGEGVFHDN-----G--KDVPIKAGDVCFTDSGESHSIENTGNTDLEF 126 (133)
T ss_dssp TSEEEEEEEEECTTCEEEEEECCSEEEEEEEEESEEEEEET-----T--EEEEEETTEEEEECTTCEEEEECCSSSCEEE
T ss_pred CceEEEEEEEECCCCccCceECCCccEEEEEEeCEEEEEEC-----C--EEEEeCCCcEEEECCCCcEEeEECCCCCEEE
Confidence 34567889999999988999998558999999999999885 3 6899999999999999999999999999999
Q ss_pred EEEE
Q 048039 156 IAAL 159 (204)
Q Consensus 156 i~~~ 159 (204)
+++.
T Consensus 127 l~v~ 130 (133)
T 1o4t_A 127 LAVI 130 (133)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8875
No 53
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=99.44 E-value=5.4e-13 Score=104.95 Aligned_cols=78 Identities=14% Similarity=0.099 Sum_probs=71.2
Q ss_pred ceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEE
Q 048039 77 LGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAI 156 (204)
Q Consensus 77 ~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i 156 (204)
..+.+.+++++||+..++|+|+. .|++||++|++++.++ + +.+.|++||++++|+|..|.+.|.++++++++
T Consensus 51 ~~~~~~~~~l~pG~~~~~H~H~~-~E~~~Vl~G~~~~~v~-----g--~~~~l~~GD~i~ip~g~~H~~~n~~~~~~~~l 122 (166)
T 3jzv_A 51 LTGELRYFEVGPGGHSTLERHQH-AHGVMILKGRGHAMVG-----R--AVSAVAPYDLVTIPGWSWHQFRAPADEALGFL 122 (166)
T ss_dssp CSEEEEEEEEEEEEECCCBBCSS-CEEEEEEEECEEEEET-----T--EEEEECTTCEEEECTTCCEEEECCTTSCEEEE
T ss_pred CeEEEEEEEECCCCccCceeCCC-cEEEEEEeCEEEEEEC-----C--EEEEeCCCCEEEECCCCcEEeEeCCCCCEEEE
Confidence 46788889999999999999987 8999999999999885 3 58999999999999999999999999999999
Q ss_pred EEEcCC
Q 048039 157 AALNSQ 162 (204)
Q Consensus 157 ~~~~s~ 162 (204)
+++...
T Consensus 123 ~i~~~~ 128 (166)
T 3jzv_A 123 CMVNAE 128 (166)
T ss_dssp EEEESS
T ss_pred EEEccC
Confidence 988753
No 54
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=99.42 E-value=9.4e-13 Score=96.53 Aligned_cols=75 Identities=8% Similarity=0.125 Sum_probs=66.5
Q ss_pred eEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEE-EeCCCcEEEECCCCeEEEEeCCCCCEEEE
Q 048039 78 GLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSK-ILNKGDVFVFPMGLLHYQRNVGKVNAVAI 156 (204)
Q Consensus 78 g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~-~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i 156 (204)
++.+.++++.||...++|+|+. .|++||++|++++.+. + +.+ .|++||++++|+|.+|++.|.++++++++
T Consensus 26 ~~~~~~~~~~pg~~~~~H~H~~-~e~~~Vl~G~~~~~i~-----~--~~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~l 97 (117)
T 2b8m_A 26 HVQINHIVLPRGEQMPKHYSNS-YVHLIIIKGEMTLTLE-----D--QEPHNYKEGNIVYVPFNVKMLIQNINSDILEFF 97 (117)
T ss_dssp SCEEEEEEEETTCBCCCEECSS-CEEEEEEESEEEEEET-----T--SCCEEEETTCEEEECTTCEEEEECCSSSEEEEE
T ss_pred ceEEEEEEECCCCcCCCEeCCC-cEEEEEEeCEEEEEEC-----C--EEEEEeCCCCEEEECCCCcEEeEcCCCCCEEEE
Confidence 4667888999999999999986 9999999999999985 3 356 99999999999999999999999999988
Q ss_pred EEEc
Q 048039 157 AALN 160 (204)
Q Consensus 157 ~~~~ 160 (204)
++..
T Consensus 98 ~i~~ 101 (117)
T 2b8m_A 98 VVKA 101 (117)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 8743
No 55
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=99.41 E-value=2.2e-13 Score=98.26 Aligned_cols=78 Identities=15% Similarity=0.188 Sum_probs=65.6
Q ss_pred eEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEE
Q 048039 78 GLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIA 157 (204)
Q Consensus 78 g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~ 157 (204)
.+.+.+++++||+..++|.|+...+++++++|++++...+ ++.....|++||++++|+|..|++.|.|+++++++.
T Consensus 16 ~v~v~~~~l~PG~~~~~H~H~~~~~iv~v~~G~~~~~~~d----G~~~~~~l~aGd~~~~p~G~~H~~~N~g~~~l~fi~ 91 (98)
T 2ozi_A 16 EVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVAPD----GTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLE 91 (98)
T ss_dssp SEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEECTT----SCEECCCBCTTCCEEECTTCEEEEEECSSSCEEEEE
T ss_pred cEEEEEEEECCCCccCcEeCCCCEEEEEEeeEEEEEEeCC----CcEEEEEECCCCEEEECCCCceeCEECCCCCEEEEE
Confidence 5789999999999999999987556777789999987632 321357899999999999999999999999999998
Q ss_pred EE
Q 048039 158 AL 159 (204)
Q Consensus 158 ~~ 159 (204)
+-
T Consensus 92 vE 93 (98)
T 2ozi_A 92 IE 93 (98)
T ss_dssp EE
T ss_pred EE
Confidence 73
No 56
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=99.41 E-value=1.1e-12 Score=95.59 Aligned_cols=75 Identities=23% Similarity=0.294 Sum_probs=66.8
Q ss_pred eEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEE
Q 048039 78 GLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIA 157 (204)
Q Consensus 78 g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~ 157 (204)
.+.+.+++++||...++|+|+. .|++||++|++++.+. + +.+.|++||++++|+|.+|.+.|.+ ++++++
T Consensus 33 ~~~~~~~~~~pg~~~~~H~H~~-~e~~~vl~G~~~~~~~-----~--~~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~l~ 102 (116)
T 2pfw_A 33 ELMAVKIWFDKGAEGYVHAHRH-SQVSYVVEGEFHVNVD-----G--VIKVLTAGDSFFVPPHVDHGAVCPT--GGILID 102 (116)
T ss_dssp TEEEEEEEECTTEEEEEECCSS-EEEEEEEEECEEEEET-----T--EEEEECTTCEEEECTTCCEEEEESS--CEEEEE
T ss_pred ceEEEEEEECCCCcCCcEECCc-ceEEEEEeeEEEEEEC-----C--EEEEeCCCCEEEECcCCceeeEeCC--CcEEEE
Confidence 4788899999999999999985 9999999999999984 3 5899999999999999999999986 678888
Q ss_pred EEcCC
Q 048039 158 ALNSQ 162 (204)
Q Consensus 158 ~~~s~ 162 (204)
++...
T Consensus 103 v~~p~ 107 (116)
T 2pfw_A 103 TFSPA 107 (116)
T ss_dssp EEESC
T ss_pred EECCc
Confidence 87644
No 57
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.41 E-value=2.6e-12 Score=98.68 Aligned_cols=78 Identities=23% Similarity=0.300 Sum_probs=70.5
Q ss_pred ceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeE-EEeCCCcEEEECCCCeEEEEeCCCCCEEE
Q 048039 77 LGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFS-KILNKGDVFVFPMGLLHYQRNVGKVNAVA 155 (204)
Q Consensus 77 ~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~-~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~ 155 (204)
.++.+.+++++||...++|+|+. .|++||++|++++.+. + +. +.|++||++++|+|.+|++.|.+++++++
T Consensus 46 ~~~~~~~~~~~pg~~~~~H~H~~-~E~~~Vl~G~~~~~~~-----~--~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~ 117 (147)
T 2f4p_A 46 FNTQVYDVVFEPGARTHWHSHPG-GQILIVTRGKGFYQER-----G--KPARILKKGDVVEIPPNVVHWHGAAPDEELVH 117 (147)
T ss_dssp SSCEEEEEEECTTCEECSEECTT-CEEEEEEEEEEEEEET-----T--SCCEEEETTCEEEECTTCCEEEEEBTTBCEEE
T ss_pred CcEEEEEEEECCCCccCceECCC-ceEEEEEeCEEEEEEC-----C--EEEEEECCCCEEEECCCCcEEeEeCCCCCEEE
Confidence 36889999999999999999998 9999999999999985 3 35 89999999999999999999999999999
Q ss_pred EEEEcCC
Q 048039 156 IAALNSQ 162 (204)
Q Consensus 156 i~~~~s~ 162 (204)
++++...
T Consensus 118 l~v~~~~ 124 (147)
T 2f4p_A 118 IGISTQV 124 (147)
T ss_dssp EEEECCG
T ss_pred EEEEccC
Confidence 9887653
No 58
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=99.39 E-value=1.3e-12 Score=102.83 Aligned_cols=75 Identities=16% Similarity=0.079 Sum_probs=65.5
Q ss_pred eEEEEEEEECC-CCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEE
Q 048039 78 GLSMVRVDFAP-DGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAI 156 (204)
Q Consensus 78 g~s~~~~~i~p-g~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i 156 (204)
.+...+++++| |+...+|.|..+.|++||++|++++.+. + +.+.|++||++++|+|..|.++|.++++++++
T Consensus 87 ~~~~~~v~lpP~G~~~~~~~~h~gEE~~yVLeG~v~vtl~-----g--~~~~L~~Gds~~iP~g~~H~~~N~~d~~Arll 159 (166)
T 2vpv_A 87 YFASGILKLPAISGQKKLSNSFRTYITFHVIQGIVEVTVC-----K--NKFLSVKGSTFQIPAFNEYAIANRGNDEAKMF 159 (166)
T ss_dssp SCEEEEEEECSSGGGCEEEECCSEEEEEEEEESEEEEEET-----T--EEEEEETTCEEEECTTCEEEEEECSSSCEEEE
T ss_pred cceeEEEEECCCCCCCCCccCCCceEEEEEEEeEEEEEEC-----C--EEEEEcCCCEEEECCCCCEEEEECCCCCEEEE
Confidence 36677899999 7766665555569999999999999995 3 69999999999999999999999999999999
Q ss_pred EEE
Q 048039 157 AAL 159 (204)
Q Consensus 157 ~~~ 159 (204)
++.
T Consensus 160 ~Vq 162 (166)
T 2vpv_A 160 FVQ 162 (166)
T ss_dssp EEE
T ss_pred EEE
Confidence 874
No 59
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=99.39 E-value=6.7e-13 Score=99.05 Aligned_cols=78 Identities=19% Similarity=0.190 Sum_probs=70.0
Q ss_pred CceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEE
Q 048039 76 TLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVA 155 (204)
Q Consensus 76 ~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~ 155 (204)
..++.+.+++++||...++|+|+. .|++||++|++++.+. + +.+.|++||++++|+|.+|.+.|.+++++.+
T Consensus 45 ~~~~~~~~~~~~pg~~~~~H~H~~-~e~~~Vl~G~~~~~i~-----~--~~~~l~~Gd~i~ip~g~~H~~~~~~~~~~~~ 116 (126)
T 1vj2_A 45 APNFVMRLFTVEPGGLIDRHSHPW-EHEIFVLKGKLTVLKE-----Q--GEETVEEGFYIFVEPNEIHGFRNDTDSEVEF 116 (126)
T ss_dssp CSSEEEEEEEEEEEEEEEEECCSS-CEEEEEEESEEEEECS-----S--CEEEEETTEEEEECTTCCEEEECCSSSCEEE
T ss_pred CCCEEEEEEEECCCCcCCceeCCC-cEEEEEEEeEEEEEEC-----C--EEEEECCCCEEEECCCCcEEeEeCCCCCEEE
Confidence 346889999999999999999985 9999999999999885 3 5899999999999999999999999999999
Q ss_pred EEEEcC
Q 048039 156 IAALNS 161 (204)
Q Consensus 156 i~~~~s 161 (204)
++++..
T Consensus 117 l~v~~~ 122 (126)
T 1vj2_A 117 LCLIPK 122 (126)
T ss_dssp EEEEEG
T ss_pred EEEEcc
Confidence 888653
No 60
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=99.38 E-value=3.5e-12 Score=94.64 Aligned_cols=75 Identities=15% Similarity=0.145 Sum_probs=67.8
Q ss_pred eEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEE
Q 048039 78 GLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIA 157 (204)
Q Consensus 78 g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~ 157 (204)
.+.+.+.+++||...++|||.. .|++||++|++++.++ + +.+.+++||++++|+|.+|.+.|.+++++.+++
T Consensus 33 ~~~~~~~~~~pg~~~~~H~H~~-~Ei~~v~~G~~~~~i~-----~--~~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~ 104 (128)
T 4i4a_A 33 PFGGAWCIVRPETKSFRHSHNE-YELFIVIQGNAIIRIN-----D--EDFPVTKGDLIIIPLDSEHHVINNNQEDFHFYT 104 (128)
T ss_dssp SSEEEEEEECTTEECCCBCCSS-EEEEEEEESEEEEEET-----T--EEEEEETTCEEEECTTCCEEEEECSSSCEEEEE
T ss_pred CcEEEEEEECCCCccCCEecCC-eEEEEEEeCEEEEEEC-----C--EEEEECCCcEEEECCCCcEEeEeCCCCCEEEEE
Confidence 5778889999999999999975 9999999999999985 3 589999999999999999999999999998887
Q ss_pred EEc
Q 048039 158 ALN 160 (204)
Q Consensus 158 ~~~ 160 (204)
++-
T Consensus 105 i~f 107 (128)
T 4i4a_A 105 IWW 107 (128)
T ss_dssp EEE
T ss_pred EEE
Confidence 754
No 61
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=99.37 E-value=2.6e-12 Score=102.17 Aligned_cols=77 Identities=19% Similarity=0.172 Sum_probs=66.9
Q ss_pred CceEEEEEEEECCCCCCC--CccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCE
Q 048039 76 TLGLSMVRVDFAPDGLNP--PHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNA 153 (204)
Q Consensus 76 ~~g~s~~~~~i~pg~~~p--pH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a 153 (204)
+..+.+.+++++||+..+ +|+|.. .|++||++|++++.++ + +.+.|++||+++||++.+|.+.|.+++++
T Consensus 101 ~~~~~~~~~~~~pg~~~~~~~H~h~~-~E~~~Vl~G~~~~~~~-----~--~~~~l~~GD~i~i~~~~~H~~~n~~~~~~ 172 (192)
T 1y9q_A 101 DTGLEIFEITLLDHHQQMSSPHALGV-IEYIHVLEGIMKVFFD-----E--QWHELQQGEHIRFFSDQPHGYAAVTEKAV 172 (192)
T ss_dssp TTTEEEEEEEECTTCEEEECCCSTTC-EEEEEEEESCEEEEET-----T--EEEEECTTCEEEEECSSSEEEEESSSCEE
T ss_pred CCcEEEEEEEECCCCCccCCCCCCCC-EEEEEEEEeEEEEEEC-----C--EEEEeCCCCEEEEcCCCCeEeECCCCCcE
Confidence 346888999999999755 788865 9999999999999885 3 68999999999999999999999999999
Q ss_pred EEEEEEcC
Q 048039 154 VAIAALNS 161 (204)
Q Consensus 154 ~~i~~~~s 161 (204)
+++++..
T Consensus 173 -~l~v~~~ 179 (192)
T 1y9q_A 173 -FQNIVAY 179 (192)
T ss_dssp -EEEEEEC
T ss_pred -EEEEEec
Confidence 7777653
No 62
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=99.37 E-value=2.9e-12 Score=93.24 Aligned_cols=74 Identities=18% Similarity=0.243 Sum_probs=64.9
Q ss_pred eEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEE
Q 048039 78 GLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIA 157 (204)
Q Consensus 78 g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~ 157 (204)
++.+.+++++||...++|+|+. .|++||++|++++.+. + +.+.|++||++++|+|.+|.+.|.+ ++++++
T Consensus 39 ~~~~~~~~~~~g~~~~~H~H~~-~e~~~vl~G~~~~~~~-----~--~~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~~~ 108 (115)
T 1yhf_A 39 DLGITVFSLDKGQEIGRHSSPG-DAMVTILSGLAEITID-----Q--ETYRVAEGQTIVMPAGIPHALYAVE--AFQMLL 108 (115)
T ss_dssp TEEEEEEEECTTCEEEEECCSS-EEEEEEEESEEEEEET-----T--EEEEEETTCEEEECTTSCEEEEESS--CEEEEE
T ss_pred ceEEEEEEECCCCccCCEECCC-cEEEEEEeCEEEEEEC-----C--EEEEECCCCEEEECCCCCEEEEECC--CceEEE
Confidence 5778889999999999999986 9999999999999884 3 5899999999999999999999986 577776
Q ss_pred EEcC
Q 048039 158 ALNS 161 (204)
Q Consensus 158 ~~~s 161 (204)
++..
T Consensus 109 v~~~ 112 (115)
T 1yhf_A 109 VVVK 112 (115)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 6543
No 63
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=99.36 E-value=2.7e-12 Score=95.23 Aligned_cols=79 Identities=14% Similarity=0.040 Sum_probs=67.1
Q ss_pred ceEEEEEEEECCCCCCC-CccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEE
Q 048039 77 LGLSMVRVDFAPDGLNP-PHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVA 155 (204)
Q Consensus 77 ~g~s~~~~~i~pg~~~p-pH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~ 155 (204)
.++.+.+++++||...+ +|+|+..++++||++|++++.+. + +.+.|++||++++|+|.+|.+.|.+++++.+
T Consensus 24 ~~~~~~~~~~~pg~~~~~~H~H~~~e~~~~vl~G~~~~~i~-----~--~~~~l~~Gd~i~i~~~~~H~~~~~~~~~~~~ 96 (125)
T 3cew_A 24 TGAEVSINHLPAGAGVPFVHSHKQNEEIYGILSGKGFITID-----G--EKIELQAGDWLRIAPDGKRQISAASDSPIGF 96 (125)
T ss_dssp SSCEEEEEEECTTCBCSSEEEESSEEEEEEEEEEEEEEEET-----T--EEEEEETTEEEEECTTCCEEEEEBTTBCEEE
T ss_pred CCcEEEEEEECCCCCCCCCccCCCceEEEEEEeCEEEEEEC-----C--EEEEeCCCCEEEECCCCcEEEEcCCCCCEEE
Confidence 35678889999999888 89998733455599999999985 3 5899999999999999999999999999998
Q ss_pred EEEEcCC
Q 048039 156 IAALNSQ 162 (204)
Q Consensus 156 i~~~~s~ 162 (204)
++++...
T Consensus 97 ~~i~~~~ 103 (125)
T 3cew_A 97 LCIQVKA 103 (125)
T ss_dssp EEEEEET
T ss_pred EEEEcCC
Confidence 8876543
No 64
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.35 E-value=2.9e-12 Score=106.11 Aligned_cols=78 Identities=13% Similarity=0.106 Sum_probs=69.7
Q ss_pred EEEEEEEECC-CCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEE
Q 048039 79 LSMVRVDFAP-DGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIA 157 (204)
Q Consensus 79 ~s~~~~~i~p-g~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~ 157 (204)
+.+..++++| |+..++|+|+. .|++||++|++++.++ + +.+.|++||++++|+|.+|.+.|.|+++++++.
T Consensus 145 ~~~~~~~~~p~g~~~~~H~H~~-~e~~~Vl~G~~~~~i~-----~--~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~ 216 (243)
T 3h7j_A 145 VEIMLAKIPGNGGEMPFHKHRN-EQIGICIGGGYDMTVE-----G--CTVEMKFGTAYFCEPREDHGAINRSEKESKSIN 216 (243)
T ss_dssp EEEEEEEECTTTEEEEEECCSS-EEEEEECSSCEEEEET-----T--EEEEECTTCEEEECTTCCEEEEECSSSCEEEEE
T ss_pred eEEEEEEECCCCCcCCCEeCCC-cEEEEEEECEEEEEEC-----C--EEEEECCCCEEEECCCCcEEeEeCCCCCEEEEE
Confidence 5677788999 88889999997 9999999999999985 3 589999999999999999999999999999999
Q ss_pred EEcCCCC
Q 048039 158 ALNSQNP 164 (204)
Q Consensus 158 ~~~s~~p 164 (204)
++.....
T Consensus 217 v~~p~~~ 223 (243)
T 3h7j_A 217 IFFPPRY 223 (243)
T ss_dssp EEESCSS
T ss_pred EEcCChh
Confidence 9885433
No 65
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=99.35 E-value=4.2e-12 Score=95.17 Aligned_cols=77 Identities=16% Similarity=0.161 Sum_probs=60.0
Q ss_pred EEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEEE
Q 048039 79 LSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIAA 158 (204)
Q Consensus 79 ~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~~ 158 (204)
+.+.++.++||+..++|+|+...|++||++|++++.+. +. +.+.|++||++++|+|.+|.+.|.+++ ++++++
T Consensus 43 ~~~~~~~~~~g~~~~~H~H~~~~E~~~vl~G~~~~~~~-----~~-~~~~l~~Gd~~~ip~g~~H~~~~~~~~-~~~l~~ 115 (134)
T 2o8q_A 43 AHVIRAIPGKEAKPTWHTHTVGFQLFYVLRGWVEFEYE-----DI-GAVMLEAGGSAFQPPGVRHRELRHSDD-LEVLEI 115 (134)
T ss_dssp EEEEEECC-----CCCEEECCSCEEEEEEESEEEEEET-----TT-EEEEEETTCEEECCTTCCEEEEEECTT-CEEEEE
T ss_pred EEEEEEecCCCCCCCCEECCCCcEEEEEEeCEEEEEEC-----Cc-EEEEecCCCEEEECCCCcEEeEeCCCC-eEEEEE
Confidence 34666666788889999998779999999999999985 31 589999999999999999999998774 677777
Q ss_pred EcCC
Q 048039 159 LNSQ 162 (204)
Q Consensus 159 ~~s~ 162 (204)
+...
T Consensus 116 ~~p~ 119 (134)
T 2o8q_A 116 VSPA 119 (134)
T ss_dssp ESST
T ss_pred ECCC
Confidence 6544
No 66
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=99.32 E-value=3.8e-12 Score=106.33 Aligned_cols=78 Identities=17% Similarity=0.078 Sum_probs=67.2
Q ss_pred CceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCC-CCEE
Q 048039 76 TLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGK-VNAV 154 (204)
Q Consensus 76 ~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~-~~a~ 154 (204)
...+.+.+++++||+..++|+|+...|++||++|++++.++ + +.+.|++||++++|++.+|++.|.|+ ++++
T Consensus 176 ~~~~~~~~~~~~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~-----~--~~~~l~~GD~i~~~~~~~H~~~n~g~~~~~~ 248 (261)
T 1rc6_A 176 GFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLD-----N--NWIPVKKGDYIFMGAYSLQAGYGVGRGEAFS 248 (261)
T ss_dssp TCSEEEEEEEECTTCCBEEEEEESSCEEEEEEESEEEEESS-----S--CEEEEETTCEEEECSSEEEEEEEC----CEE
T ss_pred CCceEEEEEEECCCCccCcccCCCceEEEEEEEeEEEEEEC-----C--EEEEeCCCCEEEECCCCcEEeEeCCCCcCEE
Confidence 34678899999999999999997679999999999999985 3 58999999999999999999999999 9999
Q ss_pred EEEEEc
Q 048039 155 AIAALN 160 (204)
Q Consensus 155 ~i~~~~ 160 (204)
++.+.+
T Consensus 249 ~l~~~d 254 (261)
T 1rc6_A 249 YIYSKD 254 (261)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 987654
No 67
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=99.31 E-value=1.3e-11 Score=89.98 Aligned_cols=72 Identities=14% Similarity=0.070 Sum_probs=62.6
Q ss_pred EEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEEE
Q 048039 79 LSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIAA 158 (204)
Q Consensus 79 ~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~~ 158 (204)
+.+..+.+.||...++|+|+. .|++||++|++++.+. + +.+.|++||++++|+|.+|.+.|. ++++++++
T Consensus 38 ~~~~~~~~~~g~~~~~H~h~~-~e~~~vl~G~~~~~i~-----~--~~~~l~~Gd~i~i~~~~~H~~~~~--~~~~~~~i 107 (114)
T 2ozj_A 38 VQISLFSFADGESVSEEEYFG-DTLYLILQGEAVITFD-----D--QKIDLVPEDVLMVPAHKIHAIAGK--GRFKMLQI 107 (114)
T ss_dssp EEEEEEEEETTSSCCCBCCSS-CEEEEEEEEEEEEEET-----T--EEEEECTTCEEEECTTCCBEEEEE--EEEEEEEE
T ss_pred ceEEEEEECCCCccccEECCC-CeEEEEEeCEEEEEEC-----C--EEEEecCCCEEEECCCCcEEEEeC--CCcEEEEE
Confidence 567777889999999999986 9999999999999985 3 589999999999999999999986 56777766
Q ss_pred Ec
Q 048039 159 LN 160 (204)
Q Consensus 159 ~~ 160 (204)
..
T Consensus 108 ~~ 109 (114)
T 2ozj_A 108 TL 109 (114)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 68
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=99.28 E-value=3.2e-11 Score=101.47 Aligned_cols=76 Identities=16% Similarity=0.151 Sum_probs=68.5
Q ss_pred ceEEEEEEEECCCCCCCC-ccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCC-CCEE
Q 048039 77 LGLSMVRVDFAPDGLNPP-HTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGK-VNAV 154 (204)
Q Consensus 77 ~g~s~~~~~i~pg~~~pp-H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~-~~a~ 154 (204)
..+.+.+++++||+..++ |+|+. .|++||++|++++.++ + +.+.|++||+++||++.+|++.|.++ ++++
T Consensus 180 ~~~~~~~~~l~pg~~~~~~H~H~~-~E~~yVl~G~~~~~i~-----~--~~~~l~~GD~i~i~~~~~H~~~n~~~~~~~~ 251 (274)
T 1sef_A 180 FDMNMHILSFEPGASHAYIETHVQ-EHGAYLISGQGMYNLD-----N--EWYPVEKGDYIFMSAYVPQAAYAVGREEPLM 251 (274)
T ss_dssp CSEEEEEEEECTTCBCSSCBCCSC-CEEEEEEECEEEEEET-----T--EEEEEETTCEEEECTTCCEEEEEECSSSCEE
T ss_pred CCEEEEEEEECCCCccCcceeccC-eEEEEEEeCEEEEEEC-----C--EEEEECCCCEEEECCCCCEEEEeCCCCCCEE
Confidence 468889999999999888 99976 9999999999999985 3 68999999999999999999999999 8998
Q ss_pred EEEEEc
Q 048039 155 AIAALN 160 (204)
Q Consensus 155 ~i~~~~ 160 (204)
+++..+
T Consensus 252 ~l~~~~ 257 (274)
T 1sef_A 252 YVYSKD 257 (274)
T ss_dssp EEEEEE
T ss_pred EEEEEc
Confidence 887743
No 69
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=99.26 E-value=2.3e-11 Score=87.43 Aligned_cols=75 Identities=24% Similarity=0.287 Sum_probs=63.1
Q ss_pred eEEEEEEEECCCCCCCCccCCCCcEE-EEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEE
Q 048039 78 GLSMVRVDFAPDGLNPPHTHPRASEI-MTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAI 156 (204)
Q Consensus 78 g~s~~~~~i~pg~~~ppH~H~~a~E~-~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i 156 (204)
.+.+.++++.||...++|+|+...|+ +||++|++++.+.+ + +.+.|++||++++|+|..|++.|.++ +.++
T Consensus 32 ~~~~~~~~~~~g~~~~~H~H~~~~e~~~~vl~G~~~~~~~~----~--~~~~l~~Gd~~~ip~~~~H~~~~~~~--~~~l 103 (110)
T 2q30_A 32 NFKIVSFTFKAGQELPVHSHNIEGELNIVVLEGEGEFVGDG----D--AVIPAPRGAVLVAPISTPHGVRAVTD--MKVL 103 (110)
T ss_dssp SCEEEEEEECTTCEEEEECCSSSCEEEEEEEESCEEEECGG----G--CEEEECTTEEEEEETTSCEEEEESSS--EEEE
T ss_pred CEEEEEEEECCCCcCCcccCCCCccEEEEEEeCEEEEEeCC----C--EEEEECCCCEEEeCCCCcEEEEEcCC--cEEE
Confidence 56788899999999999999854687 89999999998741 1 48999999999999999999999765 5666
Q ss_pred EEEc
Q 048039 157 AALN 160 (204)
Q Consensus 157 ~~~~ 160 (204)
.++.
T Consensus 104 ~~~~ 107 (110)
T 2q30_A 104 VTIA 107 (110)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 6654
No 70
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=99.25 E-value=6.1e-11 Score=98.43 Aligned_cols=77 Identities=14% Similarity=0.130 Sum_probs=68.3
Q ss_pred CceEEEEEEEECCCCCCCC-ccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEE
Q 048039 76 TLGLSMVRVDFAPDGLNPP-HTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAV 154 (204)
Q Consensus 76 ~~g~s~~~~~i~pg~~~pp-H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~ 154 (204)
...+.+.+++++||+..+. |.|.. +|.+||++|++.+.++ + +.+.|++||+++++++.+|++.|.|+++++
T Consensus 162 ~~~~~~~~~tl~PG~~~~~~~~h~~-ee~~~vLeG~~~~~~~-----~--~~~~l~~GD~~~~~~~~pH~~~n~g~~~~~ 233 (246)
T 1sfn_A 162 AFDFMVSTMSFAPGASLPYAEVHYM-EHGLLMLEGEGLYKLE-----E--NYYPVTAGDIIWMGAHCPQWYGALGRNWSK 233 (246)
T ss_dssp TCSEEEEEEEECTTCBCSSCBCCSS-CEEEEEEECEEEEEET-----T--EEEEEETTCEEEECTTCCEEEEEESSSCEE
T ss_pred CCCeEEEEEEECCCCccCcccCCCc-eEEEEEEECEEEEEEC-----C--EEEEcCCCCEEEECCCCCEEEEcCCCCCEE
Confidence 4578899999999999886 55654 9999999999999985 3 689999999999999999999999999999
Q ss_pred EEEEEc
Q 048039 155 AIAALN 160 (204)
Q Consensus 155 ~i~~~~ 160 (204)
++.+-+
T Consensus 234 yl~~kd 239 (246)
T 1sfn_A 234 YLLYKD 239 (246)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 987654
No 71
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=99.25 E-value=3.4e-11 Score=103.07 Aligned_cols=77 Identities=21% Similarity=0.190 Sum_probs=68.7
Q ss_pred eEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEE
Q 048039 78 GLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIA 157 (204)
Q Consensus 78 g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~ 157 (204)
.+++.++++.||+..++|||+...|++||++|++++.++ + +.+.|++||++++|+|.+|.+.|.++ +++++.
T Consensus 45 ~~~~~~~~~~pg~~~~~h~H~~~~e~~~Vl~G~~~~~~~-----~--~~~~l~~Gd~~~~p~~~~H~~~n~~~-~~~~~~ 116 (337)
T 1y3t_A 45 LFEIVLLSGGKGDAFPLHVHKDTHEGILVLDGKLELTLD-----G--ERYLLISGDYANIPAGTPHSYRMQSH-RTRLVS 116 (337)
T ss_dssp SEEEEEEEECTTCEEEEEECTTCCEEEEEEESCEEEEET-----T--EEEEECTTCEEEECTTCCEEEEECST-TEEEEE
T ss_pred eEEEEEEEeCCCCCCCceeCCCceEEEEEEECEEEEEEC-----C--EEEEECCCCEEEECCCCcEEEEECCC-CeEEEE
Confidence 678899999999999999998569999999999999974 3 58999999999999999999999987 688888
Q ss_pred EEcCC
Q 048039 158 ALNSQ 162 (204)
Q Consensus 158 ~~~s~ 162 (204)
++...
T Consensus 117 ~~~p~ 121 (337)
T 1y3t_A 117 YTMKG 121 (337)
T ss_dssp EEETT
T ss_pred EECCC
Confidence 87643
No 72
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=99.25 E-value=2e-11 Score=90.84 Aligned_cols=73 Identities=18% Similarity=0.175 Sum_probs=62.3
Q ss_pred eEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEE
Q 048039 78 GLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIA 157 (204)
Q Consensus 78 g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~ 157 (204)
.+++.+++++||...++|. ...|++||++|++++.++ + +.+.|++||+++||+|..|.+.|.+ ++++++.
T Consensus 39 ~~~~~~~~~~pG~~~~~H~--~~~E~~~Vl~G~~~~~~~-----g--~~~~l~~GD~v~ip~g~~H~~~~~~-~~~~~l~ 108 (119)
T 3lwc_A 39 PITIGYGRYAPGQSLTETM--AVDDVMIVLEGRLSVSTD-----G--ETVTAGPGEIVYMPKGETVTIRSHE-EGALTAY 108 (119)
T ss_dssp CCEEEEEEECTTCEEEEEC--SSEEEEEEEEEEEEEEET-----T--EEEEECTTCEEEECTTCEEEEEEEE-EEEEEEE
T ss_pred CEEEEEEEECCCCCcCccC--CCCEEEEEEeCEEEEEEC-----C--EEEEECCCCEEEECCCCEEEEEcCC-CCeEEEE
Confidence 5788889999998766664 459999999999999984 4 5899999999999999999998875 7788887
Q ss_pred EEc
Q 048039 158 ALN 160 (204)
Q Consensus 158 ~~~ 160 (204)
+..
T Consensus 109 v~~ 111 (119)
T 3lwc_A 109 VTY 111 (119)
T ss_dssp EEE
T ss_pred EEC
Confidence 765
No 73
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=99.24 E-value=1.8e-11 Score=103.56 Aligned_cols=76 Identities=18% Similarity=0.187 Sum_probs=67.7
Q ss_pred ceEEEEEEEECCCCCC--CCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEE
Q 048039 77 LGLSMVRVDFAPDGLN--PPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAV 154 (204)
Q Consensus 77 ~g~s~~~~~i~pg~~~--ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~ 154 (204)
..+++.+++++||+.. ++|.|.. .|++||++|++++.++ + +.+.|++||+++||+|.+|.+.|.++++++
T Consensus 66 ~~~~~~~~~l~PG~~~~~~~h~H~~-eE~~~Vl~G~l~v~v~-----g--~~~~L~~GD~i~ip~~~~H~~~N~g~~~~~ 137 (278)
T 1sq4_A 66 ETFSQYIVELAPNGGSDKPEQDPNA-EAVLFVVEGELSLTLQ-----G--QVHAMQPGGYAFIPPGADYKVRNTTGQHTR 137 (278)
T ss_dssp CSCEEEEEEEEEEEEESSCCCCTTE-EEEEEEEESCEEEEES-----S--CEEEECTTEEEEECTTCCEEEECCSSSCEE
T ss_pred CcEEEEEEEECCCCccCCCCcCCCc-eEEEEEEeCEEEEEEC-----C--EEEEECCCCEEEECCCCcEEEEECCCCCEE
Confidence 3678999999999865 6677874 9999999999999985 3 589999999999999999999999999999
Q ss_pred EEEEEc
Q 048039 155 AIAALN 160 (204)
Q Consensus 155 ~i~~~~ 160 (204)
++++..
T Consensus 138 ~l~v~~ 143 (278)
T 1sq4_A 138 FHWIRK 143 (278)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 998874
No 74
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=99.23 E-value=2.3e-11 Score=102.35 Aligned_cols=106 Identities=10% Similarity=0.047 Sum_probs=79.8
Q ss_pred CCCCCCCCcEEeccCCCCCCCCCCCceEEEEeccccCCCCCceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEE
Q 048039 36 PKTAHADDFYFTGLDKQGNFSNPMGSKATPVYVQQIPGLNTLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGF 115 (204)
Q Consensus 36 ~~~~~~~df~~~~~~~~~~~~~~~g~~~~~~~~~~~P~l~~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~ 115 (204)
.+.++.+|++.+.+ |+ -.+..++.+-.... +..+++.+++++||+..+.|.|. .+|++||++|++++.+
T Consensus 37 ~avI~~~~iv~s~l--Pg----~~~~~~~vL~sP~~----G~~f~~~lv~l~PGg~s~~~~h~-~EEfiyVleG~l~l~l 105 (266)
T 4e2q_A 37 HALITPESHVYSPL--PD----WTNTLGAYLITPAT----GSHFVMYLAKMKEMSSSGLPPQD-IERLIFVVEGAVTLTN 105 (266)
T ss_dssp EEEECGGGCCCEEC--TT----SSSEEEEEEECGGG----TCSSEEEEEEECSSEECCCCCTT-EEEEEEEEEECEEEEC
T ss_pred eEEECccceEEeeC--CC----CcCEEEEEEcCCCC----CCcEEEEEEEECcCCcCCCCCCC-CeEEEEEEEEEEEEEE
Confidence 34556677777744 22 23445555443333 23678999999999988888776 4999999999999998
Q ss_pred EecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEEEEc
Q 048039 116 IGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIAALN 160 (204)
Q Consensus 116 ~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~~~~ 160 (204)
++ + +++.|++||.++||++..|+++|. ++++++++..
T Consensus 106 ~~----g--~~~~L~~Gds~y~p~~~~H~~~N~--~~Ar~l~V~k 142 (266)
T 4e2q_A 106 TS----S--SSKKLTVDSYAYLPPNFHHSLDCV--ESATLVVFER 142 (266)
T ss_dssp ------C--CCEEECTTEEEEECTTCCCEEEES--SCEEEEEEEE
T ss_pred CC----C--cEEEEcCCCEEEECCCCCEEEEeC--CCEEEEEEEe
Confidence 52 2 489999999999999999999994 7899998854
No 75
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.22 E-value=2.1e-11 Score=100.82 Aligned_cols=73 Identities=18% Similarity=0.176 Sum_probs=65.9
Q ss_pred EEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEE-ECCCCeEEEEeCCCCCEEEEEE
Q 048039 80 SMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFV-FPMGLLHYQRNVGKVNAVAIAA 158 (204)
Q Consensus 80 s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~-~p~g~~H~~~N~g~~~a~~i~~ 158 (204)
.+.+++++||...++|+|+. .|++||++|++++.++ + +...|++||.++ +|+|.+|.+.|.++++++++.+
T Consensus 35 ~~~~~~~~pg~~~~~H~H~~-~e~~~Vl~G~~~~~~~-----~--~~~~l~~Gd~i~~ip~~~~H~~~n~~~~~~~~l~i 106 (243)
T 3h7j_A 35 EVLMSYVPPHTNVEPHQHKE-VQIGMVVSGELMMTVG-----D--VTRKMTALESAYIAPPHVPHGARNDTDQEVIAIDI 106 (243)
T ss_dssp EEEEEEECTTEEEEEECCSS-EEEEEEEESEEEEEET-----T--EEEEEETTTCEEEECTTCCEEEEECSSSCEEEEEE
T ss_pred EEEEEEECCCCccCCEECCC-cEEEEEEEeEEEEEEC-----C--EEEEECCCCEEEEcCCCCcEeeEeCCCCcEEEEEE
Confidence 56677899999999999996 9999999999999984 3 589999999996 9999999999999999999988
Q ss_pred Ec
Q 048039 159 LN 160 (204)
Q Consensus 159 ~~ 160 (204)
..
T Consensus 107 ~r 108 (243)
T 3h7j_A 107 KR 108 (243)
T ss_dssp EE
T ss_pred ec
Confidence 64
No 76
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=99.21 E-value=2.7e-11 Score=101.19 Aligned_cols=76 Identities=13% Similarity=0.072 Sum_probs=66.6
Q ss_pred eEEEEEEEECCCCCCCCccC-CCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEE
Q 048039 78 GLSMVRVDFAPDGLNPPHTH-PRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAI 156 (204)
Q Consensus 78 g~s~~~~~i~pg~~~ppH~H-~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i 156 (204)
.+.+.+++++||+....|.| +..+|++||++|++++.++ + +.+.|++||+++||++.+|.+.|.++++++++
T Consensus 58 ~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~~-----~--~~~~L~~Gd~~~~~~~~~H~~~N~~~~~~~~l 130 (261)
T 1rc6_A 58 SFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAE-----G--KTFALSEGGYLYCPPGSLMTFVNAQAEDSQIF 130 (261)
T ss_dssp SSEEEEEEEEEEEEESSCSCCTTEEEEEEEEESEEEEEET-----T--EEEEEETTEEEEECTTCCCEEEECSSSCEEEE
T ss_pred cEEEEEEEEcCCCccCCCCCCCCceEEEEEEEeEEEEEEC-----C--EEEEECCCCEEEECCCCCEEEEeCCCCCEEEE
Confidence 57788999999987665544 4568999999999999985 3 68999999999999999999999999999999
Q ss_pred EEEc
Q 048039 157 AALN 160 (204)
Q Consensus 157 ~~~~ 160 (204)
++..
T Consensus 131 ~v~~ 134 (261)
T 1rc6_A 131 LYKR 134 (261)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9874
No 77
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=99.20 E-value=9.6e-11 Score=85.88 Aligned_cols=74 Identities=19% Similarity=0.251 Sum_probs=58.1
Q ss_pred eEEEEEEEECCCCCCCC---ccCCCCcEEEEEEeCcEEEEEEecCCCCceeE--EEeCCCcEEEECCCCeEEEEeCCCC-
Q 048039 78 GLSMVRVDFAPDGLNPP---HTHPRASEIMTLLEGTLEVGFIGTAPDYRHFS--KILNKGDVFVFPMGLLHYQRNVGKV- 151 (204)
Q Consensus 78 g~s~~~~~i~pg~~~pp---H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~--~~L~~Gd~~~~p~g~~H~~~N~g~~- 151 (204)
++.+.++. .+|...++ |.|++ .|++||++|++++.++ + +. +.|++||+++||+|..|++.|.+++
T Consensus 30 ~~~i~~i~-~~g~~~~~~~~~~~~~-~E~~~Vl~G~~~l~~~-----~--~~~~~~l~~Gd~i~ipa~~~H~~~n~~~~~ 100 (112)
T 2opk_A 30 GLKIERII-SNGQASPPGFWYDSPQ-DEWVMVVSGSAGIECE-----G--DTAPRVMRPGDWLHVPAHCRHRVAWTDGGE 100 (112)
T ss_dssp TEEEEEEE-ESSCCCCTTCCBCCSS-EEEEEEEESCEEEEET-----T--CSSCEEECTTEEEEECTTCCEEEEEECSSS
T ss_pred CEEEEEEE-eCCccCCCCccccCCc-cEEEEEEeCeEEEEEC-----C--EEEEEEECCCCEEEECCCCcEEEEeCCCCC
Confidence 45566664 45655544 55554 9999999999999986 3 35 8999999999999999999999876
Q ss_pred CEEEEEEEc
Q 048039 152 NAVAIAALN 160 (204)
Q Consensus 152 ~a~~i~~~~ 160 (204)
++++++++.
T Consensus 101 ~~~~l~v~~ 109 (112)
T 2opk_A 101 PTVWLAVHC 109 (112)
T ss_dssp CEEEEEEEE
T ss_pred CEEEEEEEE
Confidence 677777764
No 78
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=99.20 E-value=1.3e-10 Score=101.24 Aligned_cols=81 Identities=15% Similarity=0.165 Sum_probs=64.8
Q ss_pred eEEEEEEEECCCC-CCC--CccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEE
Q 048039 78 GLSMVRVDFAPDG-LNP--PHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAV 154 (204)
Q Consensus 78 g~s~~~~~i~pg~-~~p--pH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~ 154 (204)
.+.+. ..+.|++ ..+ +|+|+...|++||++|++++.+++.+ ++.+.+.|++||++++|+|.+|++.|.++++ +
T Consensus 47 ~~~~~-~~~~p~g~~~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~~--g~~~~~~L~~GD~v~ip~g~~H~~~n~~~~~-~ 122 (350)
T 1juh_A 47 AFTLM-GTNAPHSDALGVLPHIHQKHYENFYCNKGSFQLWAQSGN--ETQQTRVLSSGDYGSVPRNVTHTFQIQDPDT-E 122 (350)
T ss_dssp SCEEE-EEEECCCSSCSSCCEECSSCEEEEEEEESEEEEEEEETT--SCCEEEEEETTCEEEECTTEEEEEEECSTTE-E
T ss_pred cEEEE-EEEcCCCCCCCCccccCCCceEEEEEEEEEEEEEECCcC--CceEEEEECCCCEEEECCCCcEEEEeCCCCC-E
Confidence 45666 4455555 455 99999669999999999999998633 3336899999999999999999999998876 8
Q ss_pred EEEEEcCC
Q 048039 155 AIAALNSQ 162 (204)
Q Consensus 155 ~i~~~~s~ 162 (204)
+++++...
T Consensus 123 ~l~v~~p~ 130 (350)
T 1juh_A 123 MTGVIVPG 130 (350)
T ss_dssp EEEEEESS
T ss_pred EEEEEcCc
Confidence 88777643
No 79
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=99.19 E-value=5.3e-11 Score=85.79 Aligned_cols=69 Identities=19% Similarity=0.215 Sum_probs=54.5
Q ss_pred EEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEEE
Q 048039 81 MVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIAA 158 (204)
Q Consensus 81 ~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~~ 158 (204)
..++.+.||. .++|+|+...|++||++|++++.+. +. ..+.|++||++++|+|.+|++.|. ++++++.+
T Consensus 30 ~~~~~~~~g~-~~~H~H~~~~E~~~Vl~G~~~~~~~-----~~-~~~~l~~Gd~~~ip~~~~H~~~~~--~~~~~l~i 98 (107)
T 2i45_A 30 QFHLVKLLGD-YGWHTHGYSDKVLFAVEGDMAVDFA-----DG-GSMTIREGEMAVVPKSVSHRPRSE--NGCSLVLI 98 (107)
T ss_dssp EEEEEEEEEE-CCCBCC--CCEEEEESSSCEEEEET-----TS-CEEEECTTEEEEECTTCCEEEEEE--EEEEEEEE
T ss_pred EEEEEECCCC-CcceeCCCCCEEEEEEeCEEEEEEC-----CC-cEEEECCCCEEEECCCCcEeeEeC--CCeEEEEE
Confidence 3446667776 4599998769999999999999985 31 389999999999999999999995 45666654
No 80
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=99.17 E-value=3.5e-10 Score=96.71 Aligned_cols=74 Identities=22% Similarity=0.175 Sum_probs=63.1
Q ss_pred EEEEEECC-CCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEEEE
Q 048039 81 MVRVDFAP-DGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIAAL 159 (204)
Q Consensus 81 ~~~~~i~p-g~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~~~ 159 (204)
...+.+.| |...++|+|+...|++||++|++++.++ + +.+.|++||++++|++.+|++.|.++ ++++++++
T Consensus 219 ~~~~~~~p~g~~~~~h~H~~~~e~~~vl~G~~~~~i~-----~--~~~~l~~GD~~~ip~~~~H~~~n~~~-~~~~l~v~ 290 (337)
T 1y3t_A 219 IVVSSEGPKGDRIVDHYHEYHTETFYCLEGQMTMWTD-----G--QEIQLNPGDFLHVPANTVHSYRLDSH-YTKMVGVL 290 (337)
T ss_dssp EEEEEEECSCCCCCCEECSSCEEEEEEEESCEEEEET-----T--EEEEECTTCEEEECTTCCEEEEECSS-SEEEEEEE
T ss_pred EEEEEEcCCCCCCCCcCCCCCcEEEEEEeCEEEEEEC-----C--EEEEECCCCEEEECCCCeEEEEECCC-CeEEEEEE
Confidence 34455555 6678999998569999999999999985 3 68999999999999999999999988 89999988
Q ss_pred cCC
Q 048039 160 NSQ 162 (204)
Q Consensus 160 ~s~ 162 (204)
+..
T Consensus 291 ~~~ 293 (337)
T 1y3t_A 291 VPG 293 (337)
T ss_dssp ESS
T ss_pred cCc
Confidence 644
No 81
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=99.17 E-value=3.9e-11 Score=101.00 Aligned_cols=77 Identities=13% Similarity=0.110 Sum_probs=66.6
Q ss_pred ceEEEEEEEECCCCCCCCcc-CCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEE
Q 048039 77 LGLSMVRVDFAPDGLNPPHT-HPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVA 155 (204)
Q Consensus 77 ~g~s~~~~~i~pg~~~ppH~-H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~ 155 (204)
..+.+.+++++||+....|. |+..+|++||++|++++.++ + +.+.|++||+++||++.+|.++|.+++++++
T Consensus 60 ~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~~-----~--~~~~L~~GD~~~~~~~~~H~~~N~~~~~~~~ 132 (274)
T 1sef_A 60 ATFVDYIATFHKNGQQTTGFGGDGIQTLVYVIDGRLRVSDG-----Q--ETHELEAGGYAYFTPEMKMYLANAQEADTEV 132 (274)
T ss_dssp CSSEEEEEEEEEEEEECSCSSBTTEEEEEEEEESEEEEECS-----S--CEEEEETTEEEEECTTSCCEEEESSSSCEEE
T ss_pred CcEEEEEEEECCCCcCCCCCCCCCceEEEEEEEeEEEEEEC-----C--EEEEECCCCEEEECCCCCEEEEeCCCCCEEE
Confidence 35778899999998765554 45568999999999999985 3 5899999999999999999999999999999
Q ss_pred EEEEc
Q 048039 156 IAALN 160 (204)
Q Consensus 156 i~~~~ 160 (204)
+++..
T Consensus 133 l~v~~ 137 (274)
T 1sef_A 133 FLYKK 137 (274)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99873
No 82
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=99.17 E-value=4.8e-11 Score=104.22 Aligned_cols=76 Identities=21% Similarity=0.253 Sum_probs=67.8
Q ss_pred eEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEE
Q 048039 78 GLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIA 157 (204)
Q Consensus 78 g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~ 157 (204)
.+.+....++||+..++|+|.. .|++||++|++++..++ + +.+.+++||++++|+|..|.+.|.++++++++.
T Consensus 99 ~l~~~~~~l~PG~~~~~H~H~~-~e~~yVl~G~g~~t~v~----g--~~~~l~~GD~~~iP~g~~H~~~n~~~~~~~~l~ 171 (354)
T 2d40_A 99 TLYAGLQLIMPGEVAPSHRHNQ-SALRFIVEGKGAFTAVD----G--ERTPMNEGDFILTPQWRWHDHGNPGDEPVIWLD 171 (354)
T ss_dssp SCEEEEEEECTTCEEEEEEESS-CEEEEEEECSSCEEEET----T--EEEECCTTCEEEECTTSCEEEECCSSSCEEEEE
T ss_pred cEEEEEEEECCCCCcCCeecCc-ceEEEEEEEEEEEEEEC----C--EEEEEcCCCEEEECCCCcEEeEeCCCCCEEEEE
Confidence 5788899999999999999986 89999999999884442 3 689999999999999999999999999999998
Q ss_pred EEc
Q 048039 158 ALN 160 (204)
Q Consensus 158 ~~~ 160 (204)
+.+
T Consensus 172 v~d 174 (354)
T 2d40_A 172 GLD 174 (354)
T ss_dssp EEC
T ss_pred EEC
Confidence 864
No 83
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=99.15 E-value=6.2e-11 Score=89.82 Aligned_cols=71 Identities=18% Similarity=0.072 Sum_probs=60.3
Q ss_pred eEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEE
Q 048039 78 GLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIA 157 (204)
Q Consensus 78 g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~ 157 (204)
.+++.+++++|| ..|||....|++||++|++++.+. + +.+.|++||+++||+|..|.+.| .+++++++
T Consensus 56 ~~~~~~~~~~pG---~~~~h~~~~E~~~VLeG~~~l~~~-----g--~~~~l~~GD~i~~p~g~~h~~~~--~~~~~~l~ 123 (133)
T 2pyt_A 56 SMAAGFMQWDNA---FFPWTLNYDEIDMVLEGELHVRHE-----G--ETMIAKAGDVMFIPKGSSIEFGT--PTSVRFLY 123 (133)
T ss_dssp SSEEEEEEEEEE---EEEEECSSEEEEEEEEEEEEEEET-----T--EEEEEETTCEEEECTTCEEEEEE--EEEEEEEE
T ss_pred cEEEEEEEECCC---CccccCCCCEEEEEEECEEEEEEC-----C--EEEEECCCcEEEECCCCEEEEEe--CCCEEEEE
Confidence 477888899999 456665569999999999999984 3 58999999999999999999987 46788888
Q ss_pred EEc
Q 048039 158 ALN 160 (204)
Q Consensus 158 ~~~ 160 (204)
++.
T Consensus 124 v~~ 126 (133)
T 2pyt_A 124 VAW 126 (133)
T ss_dssp EEE
T ss_pred EEc
Confidence 764
No 84
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=99.14 E-value=1.3e-10 Score=94.58 Aligned_cols=78 Identities=14% Similarity=0.090 Sum_probs=69.1
Q ss_pred CceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEE
Q 048039 76 TLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVA 155 (204)
Q Consensus 76 ~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~ 155 (204)
...+.+..+.++||...|+|.|+. +|+.|||+|++++.+++ + +...+++||++++|+|++|.++ .+++|+.+
T Consensus 129 s~~l~lG~v~l~PG~~yP~HsHp~-EEiy~VLsG~~e~~v~~----g--~~~~l~pGd~v~ipsgv~Ha~r-t~dePlla 200 (217)
T 4b29_A 129 TQSLRVTVGYWGPGLDYGWHEHLP-EELYSVVSGRALFHLRN----A--PDLMLEPGQTRFHPANAPHAMT-TLTDPILT 200 (217)
T ss_dssp CSSCEEEEEEECSSCEEEEEECSS-EEEEEEEEECEEEEETT----S--CCEEECTTCEEEECTTCCEEEE-CCSSCEEE
T ss_pred CCeEEEEEEEECCCCcCCCCCCCC-ceEEEEEeCCEEEEECC----C--CEEecCCCCEEEcCCCCceeEE-ECCccEEE
Confidence 346788889999999999999996 99999999999999852 2 5899999999999999999998 48899998
Q ss_pred EEEEcC
Q 048039 156 IAALNS 161 (204)
Q Consensus 156 i~~~~s 161 (204)
+++...
T Consensus 201 lwvW~G 206 (217)
T 4b29_A 201 LVLWRG 206 (217)
T ss_dssp EEEEES
T ss_pred EEEEeC
Confidence 888753
No 85
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=99.14 E-value=1.2e-10 Score=95.37 Aligned_cols=73 Identities=23% Similarity=0.253 Sum_probs=64.3
Q ss_pred eEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEE
Q 048039 78 GLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIA 157 (204)
Q Consensus 78 g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~ 157 (204)
.+.+.+++++||...++|+|+. .|++||++|++++.++ + +.+.|++||.+++|+|.+|++.|. .++++++.
T Consensus 152 ~~~~~~~~~~~G~~~~~H~H~~-~e~~~Vl~G~~~~~i~-----g--~~~~l~~Gd~i~ip~~~~H~~~~~-~~~~~~ll 222 (227)
T 3rns_A 152 NLVMTIMSFWKGESLDPHKAPG-DALVTVLDGEGKYYVD-----G--KPFIVKKGESAVLPANIPHAVEAE-TENFKMLL 222 (227)
T ss_dssp TEEEEEEEECTTCEEEEECCSS-EEEEEEEEEEEEEEET-----T--EEEEEETTEEEEECTTSCEEEECC-SSCEEEEE
T ss_pred CeEEEEEEECCCCccCCEECCC-cEEEEEEeEEEEEEEC-----C--EEEEECCCCEEEECCCCcEEEEeC-CCCEEEEE
Confidence 4678889999999999999996 9999999999999985 3 589999999999999999999983 56677776
Q ss_pred EE
Q 048039 158 AL 159 (204)
Q Consensus 158 ~~ 159 (204)
++
T Consensus 223 ~~ 224 (227)
T 3rns_A 223 IL 224 (227)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 86
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=99.11 E-value=3.5e-10 Score=95.59 Aligned_cols=84 Identities=13% Similarity=-0.019 Sum_probs=71.7
Q ss_pred ccCCCCCceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCC
Q 048039 70 QIPGLNTLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVG 149 (204)
Q Consensus 70 ~~P~l~~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g 149 (204)
-.|......+.+.+++++||+..+.|.|...+|.+|||+|++.+.++ + +.+.|++||+++++++..|++.|.|
T Consensus 182 l~p~~~~~~~~~~~~~l~pG~~i~~~~~h~~e~~~~il~G~~~~~~~-----~--~~~~v~~GD~~~~~~~~~h~~~n~g 254 (278)
T 1sq4_A 182 VDMSDMRHDMHVNIVNFEPGGVIPFAETHVMEHGLYVLEGKAVYRLN-----Q--DWVEVEAGDFMWLRAFCPQACYSGG 254 (278)
T ss_dssp SCTTCTTCSEEEEEEEECSSSEESCCCCCSEEEEEEEEECEEEEEET-----T--EEEEEETTCEEEEEESCCEEEECCS
T ss_pred ecCCCcCCCeEEEEEEECCCCCcCCCCCCCccEEEEEEeCEEEEEEC-----C--EEEEeCCCCEEEECCCCCEEEEcCC
Confidence 34434455789999999999999874333448999999999999884 3 6999999999999999999999999
Q ss_pred CCCEEEEEEEc
Q 048039 150 KVNAVAIAALN 160 (204)
Q Consensus 150 ~~~a~~i~~~~ 160 (204)
++++++|.+.+
T Consensus 255 ~~~~~yl~~~d 265 (278)
T 1sq4_A 255 PGRFRYLLYKD 265 (278)
T ss_dssp SSCEEEEEEEE
T ss_pred CCCEEEEEEEE
Confidence 99999999876
No 87
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=99.10 E-value=2.3e-10 Score=80.97 Aligned_cols=60 Identities=25% Similarity=0.413 Sum_probs=50.9
Q ss_pred CCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEEE
Q 048039 90 GLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIAA 158 (204)
Q Consensus 90 ~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~~ 158 (204)
+..++|+|+...|++||++|++++.+. + +.+.|++||++++|+|..|.+.|.+ ++.++.+
T Consensus 40 ~~~~~H~H~~~~e~~~v~~G~~~~~~~-----~--~~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~l~i 99 (102)
T 3d82_A 40 GEFVWHEHADTDEVFIVMEGTLQIAFR-----D--QNITLQAGEMYVIPKGVEHKPMAKE--ECKIMII 99 (102)
T ss_dssp EECCCBCCTTCCEEEEEEESEEEEECS-----S--CEEEEETTEEEEECTTCCBEEEEEE--EEEEEEE
T ss_pred CCCCceeCCCCcEEEEEEeCEEEEEEC-----C--EEEEEcCCCEEEECCCCeEeeEcCC--CCEEEEE
Confidence 358899998779999999999999885 3 5899999999999999999999973 5555543
No 88
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=99.10 E-value=3.1e-10 Score=92.95 Aligned_cols=73 Identities=12% Similarity=-0.014 Sum_probs=65.6
Q ss_pred eEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEE
Q 048039 78 GLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIA 157 (204)
Q Consensus 78 g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~ 157 (204)
+..+.++.+.||...++|.|+. +|++||++|++++.++ + +++.|++||++++|+|.+|.+.|. ++++++.
T Consensus 36 ~~~~~~~~~~~G~~~~~h~h~~-~~~~~Vl~G~~~~~i~-----~--~~~~l~~Gd~~~~p~~~~H~~~a~--~~~~~l~ 105 (227)
T 3rns_A 36 NSYISLFSLAKDEEITAEAMLG-NRYYYCFNGNGEIFIE-----N--NKKTISNGDFLEITANHNYSIEAR--DNLKLIE 105 (227)
T ss_dssp SEEEEEEEECTTCEEEECSCSS-CEEEEEEESEEEEEES-----S--CEEEEETTEEEEECSSCCEEEEES--SSEEEEE
T ss_pred CcEEEEEEECCCCccCccccCC-CEEEEEEeCEEEEEEC-----C--EEEEECCCCEEEECCCCCEEEEEC--CCcEEEE
Confidence 4678899999999999999987 9999999999999985 3 589999999999999999999985 5788888
Q ss_pred EEc
Q 048039 158 ALN 160 (204)
Q Consensus 158 ~~~ 160 (204)
+..
T Consensus 106 i~~ 108 (227)
T 3rns_A 106 IGE 108 (227)
T ss_dssp EEE
T ss_pred EEe
Confidence 854
No 89
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=99.10 E-value=2.1e-09 Score=90.40 Aligned_cols=75 Identities=17% Similarity=0.153 Sum_probs=67.3
Q ss_pred CceEEEEEEEECCCCCCCC-ccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEE
Q 048039 76 TLGLSMVRVDFAPDGLNPP-HTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAV 154 (204)
Q Consensus 76 ~~g~s~~~~~i~pg~~~pp-H~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~ 154 (204)
...+.+.+++++||+..+. |.|.. +|.+|||+|++.+.++ + ..+.+++||+++++++.+|++.|.|+++++
T Consensus 183 ~~d~~~~~~t~~PG~~~p~~e~H~~-eh~~~vL~G~g~y~l~-----~--~~~~V~~GD~i~~~~~~~h~~~n~G~e~~~ 254 (266)
T 4e2q_A 183 AYDFNIHTMDFQPGEFLNVKEVHYN-QHGLLLLEGQGIYRLG-----D--NWYPVQAGDVIWMAPFVPQWYAALGKTRSR 254 (266)
T ss_dssp TCSEEEEEEEECTTCBCSSCCCCSC-CEEEEEEECEEEEEET-----T--EEEEEETTCEEEECTTCCEEEEEESSSCEE
T ss_pred ccceEEEEEEECCCcCcCCceEccc-ceEEEEEeceEEEEEC-----C--EEEEecCCCEEEECCCCcEEEEeCCCCCEE
Confidence 4478889999999999996 67765 8999999999999985 3 699999999999999999999999999999
Q ss_pred EEEE
Q 048039 155 AIAA 158 (204)
Q Consensus 155 ~i~~ 158 (204)
+|.-
T Consensus 255 yl~y 258 (266)
T 4e2q_A 255 YLLY 258 (266)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9864
No 90
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=99.09 E-value=3.3e-10 Score=88.10 Aligned_cols=71 Identities=18% Similarity=0.126 Sum_probs=58.7
Q ss_pred EEEEEEEECCCCCCCCccCCCCcEEEEEEe--CcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEE
Q 048039 79 LSMVRVDFAPDGLNPPHTHPRASEIMTLLE--GTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAI 156 (204)
Q Consensus 79 ~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~--G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i 156 (204)
+++.++++ +...++|||+...|++||++ |++++.++ + +.+.|++||++++|+|..|++.+ ++++|
T Consensus 47 ~sv~~v~~--g~~~~~H~H~~~~E~~yVLe~~G~g~v~id-----g--e~~~l~~GD~v~IPpg~~H~i~g----~l~~L 113 (157)
T 4h7l_A 47 VSVHYTQI--TKAARTHYHREHQEIYVVLDHAAHATIELN-----G--QSYPLTKLLAISIPPLVRHRIVG----EATII 113 (157)
T ss_dssp CEEEEEEE--CSCCCCBBCSSCEEEEEEEEECTTCEEEET-----T--EEEECCTTEEEEECTTCCEEEES----CEEEE
T ss_pred EEEEEEeC--CCCccceECCCCcEEEEEEecCcEEEEEEC-----C--EEEEeCCCCEEEECCCCeEeeEC----CEEEE
Confidence 34555555 45578999987789999999 99999985 4 68999999999999999999973 69999
Q ss_pred EEEcCC
Q 048039 157 AALNSQ 162 (204)
Q Consensus 157 ~~~~s~ 162 (204)
++++..
T Consensus 114 ~I~~Pp 119 (157)
T 4h7l_A 114 NIVSPP 119 (157)
T ss_dssp EEEESS
T ss_pred EEECCC
Confidence 987643
No 91
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=99.08 E-value=1.7e-09 Score=95.53 Aligned_cols=75 Identities=15% Similarity=0.069 Sum_probs=67.5
Q ss_pred eEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCC-CCCEEEE
Q 048039 78 GLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVG-KVNAVAI 156 (204)
Q Consensus 78 g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g-~~~a~~i 156 (204)
.+.+....++||+..++|.|.. .|++||++|++++.++ + +...+++||++++|+|..|.+.|.| ++++.++
T Consensus 293 tl~~~~~~l~PG~~~~~HrH~~-~~v~~VleG~G~~~V~-----g--e~~~~~~GD~~~iP~g~~H~~~N~g~~e~~~ll 364 (394)
T 3bu7_A 293 TMGASMQMLRPGEHTKAHRHTG-NVIYNVAKGQGYSIVG-----G--KRFDWSEHDIFCVPAWTWHEHCNTQERDDACLF 364 (394)
T ss_dssp SCEEEEEEECTTCBCCCEEESS-CEEEEEEECCEEEEET-----T--EEEEECTTCEEEECTTCCEEEEECCSSCCEEEE
T ss_pred eeeEEEEEECCCCcCCCcccCC-cEEEEEEeCeEEEEEC-----C--EEEEEeCCCEEEECCCCeEEeEeCCCCCCeEEE
Confidence 4678889999999999999986 8999999999988874 4 6999999999999999999999998 7999998
Q ss_pred EEEc
Q 048039 157 AALN 160 (204)
Q Consensus 157 ~~~~ 160 (204)
++.+
T Consensus 365 ~i~D 368 (394)
T 3bu7_A 365 SFND 368 (394)
T ss_dssp EEES
T ss_pred EeeC
Confidence 8743
No 92
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=99.05 E-value=1.1e-09 Score=95.62 Aligned_cols=89 Identities=15% Similarity=-0.005 Sum_probs=71.9
Q ss_pred CCceEEEEecc-ccCCCCCceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEE
Q 048039 59 MGSKATPVYVQ-QIPGLNTLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVF 137 (204)
Q Consensus 59 ~g~~~~~~~~~-~~P~l~~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~ 137 (204)
.|..+..++.. ..+.+++. ++....++||+..++|+|+. .|++||++|++++.++ + ++..+++||++++
T Consensus 249 ~G~~~~~~np~t~~~~~~ti--~~~~~~l~pG~~~~~H~h~~-~ev~~v~~G~g~~~v~-----~--~~~~~~~GD~~~v 318 (354)
T 2d40_A 249 DGYKMRYVNPVTGGYPMPSM--GAFLQLLPKGFASRVARTTD-STIYHVVEGSGQVIIG-----N--ETFSFSAKDIFVV 318 (354)
T ss_dssp TBEEEEECCTTTSSCSSSSC--EEEEEEECTTCBCCCBEESS-CEEEEEEEEEEEEEET-----T--EEEEEETTCEEEE
T ss_pred CCeEEEEeCCCcCCCCCCcc--eeEEEEECCCCCCCceecCC-cEEEEEEeCeEEEEEC-----C--EEEEEcCCCEEEE
Confidence 35555555533 45555554 45567999999999999998 6999999999999984 4 6999999999999
Q ss_pred CCCCeEEEEeCCCCCEEEEEEE
Q 048039 138 PMGLLHYQRNVGKVNAVAIAAL 159 (204)
Q Consensus 138 p~g~~H~~~N~g~~~a~~i~~~ 159 (204)
|++..|++.|. ++++++++.
T Consensus 319 P~~~~H~~~n~--e~~~l~~~~ 338 (354)
T 2d40_A 319 PTWHGVSFQTT--QDSVLFSFS 338 (354)
T ss_dssp CTTCCEEEEEE--EEEEEEEEE
T ss_pred CCCCeEEEEeC--CCEEEEEEc
Confidence 99999999994 778888773
No 93
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=99.05 E-value=3.9e-10 Score=98.77 Aligned_cols=77 Identities=17% Similarity=0.164 Sum_probs=68.5
Q ss_pred ceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEE
Q 048039 77 LGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAI 156 (204)
Q Consensus 77 ~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i 156 (204)
..+.+....+.||+..++|.|.. .|+.||++|++.+..++ + +...+++||++++|+|..|...|.|+++++++
T Consensus 101 ~~L~a~~~~l~PG~~~~~HrH~~-~ev~~VleG~G~~~~vd----G--~~~~~~~GD~v~iP~g~~H~~~N~gde~l~~l 173 (368)
T 3nw4_A 101 PTMWAAIQYLGPRETAPEHRHSQ-NAFRFVVEGEGVWTVVN----G--DPVRMSRGDLLLTPGWCFHGHMNDTDQPMAWI 173 (368)
T ss_dssp SSCEEEEEEECTTCEEEEEEESS-CEEEECSSCEEEEEEET----T--EEEEEETTCEEEECTTCCEEEEECSSSCEEEE
T ss_pred CceEEEEEEECCCCccCceeccc-ceEEEEEecceEEEEEC----C--EEEEEeCCCEEEECCCCcEEeEeCCCCCeEEE
Confidence 45788888999999999999986 89999999999633432 4 69999999999999999999999999999999
Q ss_pred EEEc
Q 048039 157 AALN 160 (204)
Q Consensus 157 ~~~~ 160 (204)
.+++
T Consensus 174 ~v~D 177 (368)
T 3nw4_A 174 DGLD 177 (368)
T ss_dssp EEEC
T ss_pred Eecc
Confidence 9875
No 94
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=99.05 E-value=1.2e-09 Score=96.49 Aligned_cols=78 Identities=15% Similarity=0.097 Sum_probs=69.3
Q ss_pred CceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEe-CCCCCEE
Q 048039 76 TLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRN-VGKVNAV 154 (204)
Q Consensus 76 ~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N-~g~~~a~ 154 (204)
+..+.+....+.||...++|.|.. .|+.||++|++.+..++ + +...+++||++++|+|..|...| .|+++++
T Consensus 120 t~~L~a~~~~l~PG~~~~~HrH~~-~ev~~IleG~G~~t~v~----G--~~~~~~~GD~i~~P~g~~H~~~N~~gde~l~ 192 (394)
T 3bu7_A 120 CGWLFSGIQTMKAGERAGAHRHAA-SALRFIMEGSGAYTIVD----G--HKVELGANDFVLTPNGTWHEHGILESGTECI 192 (394)
T ss_dssp BTTBEEEEEEECTTCBCCCEEESS-CEEEEEEECSCEEEEET----T--EEEEECTTCEEEECTTCCEEEEECTTCCCEE
T ss_pred CCeeEEEEEEECCCCCcCCccCCc-ceEEEEEEeeEEEEEEC----C--EEEEEcCCCEEEECcCCCEEEEcCCCCCCEE
Confidence 346788999999999999999987 79999999999774442 4 69999999999999999999999 9999999
Q ss_pred EEEEEc
Q 048039 155 AIAALN 160 (204)
Q Consensus 155 ~i~~~~ 160 (204)
++++.+
T Consensus 193 ~l~v~d 198 (394)
T 3bu7_A 193 WQDGLD 198 (394)
T ss_dssp EEEEEC
T ss_pred EEEccc
Confidence 998774
No 95
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=99.05 E-value=8.1e-10 Score=85.50 Aligned_cols=71 Identities=15% Similarity=0.037 Sum_probs=57.8
Q ss_pred eEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEE
Q 048039 78 GLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIA 157 (204)
Q Consensus 78 g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~ 157 (204)
.+++..++++ ++. .|||...+|+.||++|++++.+. + +.+.|++||+++||+|..|++.|. +++++++
T Consensus 65 ~~s~g~~~~e-~~~--~~~~~~~eE~~yVLeG~~~l~i~-----g--~~~~l~~GD~i~iP~G~~h~~~n~--~~a~~l~ 132 (151)
T 4axo_A 65 RLGCGMMEMK-ETT--FDWTLNYDEIDYVIDGTLDIIID-----G--RKVSASSGELIFIPKGSKIQFSVP--DYARFIY 132 (151)
T ss_dssp SCEEEEEEEE-EEE--EEEECSSEEEEEEEEEEEEEEET-----T--EEEEEETTCEEEECTTCEEEEEEE--EEEEEEE
T ss_pred cEEEEEEEEc-Ccc--ccEeCCCcEEEEEEEeEEEEEEC-----C--EEEEEcCCCEEEECCCCEEEEEeC--CCEEEEE
Confidence 3566666665 333 45665669999999999999973 4 689999999999999999999997 7888888
Q ss_pred EEc
Q 048039 158 ALN 160 (204)
Q Consensus 158 ~~~ 160 (204)
+..
T Consensus 133 V~~ 135 (151)
T 4axo_A 133 VTY 135 (151)
T ss_dssp EEE
T ss_pred EEC
Confidence 875
No 96
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=98.93 E-value=1.4e-08 Score=81.42 Aligned_cols=86 Identities=22% Similarity=0.225 Sum_probs=66.8
Q ss_pred EEEEEEECCCCC----------CCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCC
Q 048039 80 SMVRVDFAPDGL----------NPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVG 149 (204)
Q Consensus 80 s~~~~~i~pg~~----------~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g 149 (204)
+...+.+.|+.. .++|+|+. .|++||++|++.+.+.+.+ ++.....+++||++++|+|+.|++.+..
T Consensus 75 ~~D~v~~~p~~~p~~~~k~~~~~~~H~H~~-~Ei~yVleG~G~f~i~d~~--d~~~~i~v~~GDlIiIPaG~~H~f~~~~ 151 (191)
T 1vr3_A 75 WMDIITICKDTLPNYEEKIKMFFEEHLHLD-EEIRYILEGSGYFDVRDKE--DKWIRISMEKGDMITLPAGIYHRFTLDE 151 (191)
T ss_dssp EEEEEEESTTTSTTHHHHHHHHHSCEECSS-CEEEEEEEEEEEEEEECTT--SCEEEEEEETTEEEEECTTCCEEEEECT
T ss_pred ceeEEEECCCcCcchhhhhccCCcceECCc-ceEEEEEeceEEEEECCCC--CeEEEEEECCCCEEEECcCCcCCcccCC
Confidence 345566777752 38999997 9999999999999998532 2323679999999999999999999877
Q ss_pred CCCEEEEEEEcCCCCCceec
Q 048039 150 KVNAVAIAALNSQNPGTSSI 169 (204)
Q Consensus 150 ~~~a~~i~~~~s~~pg~~~~ 169 (204)
+..+..+-+|. ..|++.-.
T Consensus 152 ~~~~~airlF~-~~~~W~~~ 170 (191)
T 1vr3_A 152 KNYVKAMRLFV-GEPVWTPY 170 (191)
T ss_dssp TCCEEEEEEES-SSCCCCCE
T ss_pred CCCEEEEEEEC-CCCCccCC
Confidence 77788887776 44776533
No 97
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=98.92 E-value=1.9e-09 Score=89.41 Aligned_cols=71 Identities=13% Similarity=0.115 Sum_probs=62.4
Q ss_pred eEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEE
Q 048039 78 GLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIA 157 (204)
Q Consensus 78 g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~ 157 (204)
.+.+.+++++||+....|. .+|++||++|++++.++ + +.+.|++||+++||++.+|.+.|. +++++++
T Consensus 49 ~~~~~~~~l~Pg~~~~~~~---~ee~~~Vl~G~~~~~~~-----~--~~~~l~~Gd~~~~p~~~~H~~~n~--~~~~~l~ 116 (246)
T 1sfn_A 49 RFVQFTAEMPAGAQATESV---YQRFAFVLSGEVDVAVG-----G--ETRTLREYDYVYLPAGEKHMLTAK--TDARVSV 116 (246)
T ss_dssp SSEEEEEEECTTCEEECCS---SEEEEEEEEEEEEEECS-----S--CEEEECTTEEEEECTTCCCEEEEE--EEEEEEE
T ss_pred cEEEEEEEECCCCcCCCCc---eeEEEEEEECEEEEEEC-----C--EEEEECCCCEEEECCCCCEEEEeC--CCEEEEE
Confidence 5778899999999877774 59999999999999985 3 589999999999999999999998 7788888
Q ss_pred EEc
Q 048039 158 ALN 160 (204)
Q Consensus 158 ~~~ 160 (204)
+..
T Consensus 117 v~~ 119 (246)
T 1sfn_A 117 FEK 119 (246)
T ss_dssp EEE
T ss_pred EEe
Confidence 763
No 98
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=98.88 E-value=2.9e-09 Score=76.90 Aligned_cols=64 Identities=22% Similarity=0.179 Sum_probs=50.5
Q ss_pred EEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEE
Q 048039 83 RVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVA 155 (204)
Q Consensus 83 ~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~ 155 (204)
..++.||.. ++| |+. .|++||++|++++.+.+ + +.+.|++||+++||+|.+|.+.|.++....+
T Consensus 35 ~~~~~pg~~-~~h-H~~-~E~~~Vl~G~~~~~i~~----g--~~~~l~~GD~i~ip~g~~H~~~n~~~~~~~y 98 (101)
T 1o5u_A 35 IWEKEVSEF-DWY-YDT-NETCYILEGKVEVTTED----G--KKYVIEKGDLVTFPKGLRCRWKVLEPVRKHY 98 (101)
T ss_dssp EEEECSEEE-EEE-CSS-CEEEEEEEEEEEEEETT----C--CEEEEETTCEEEECTTCEEEEEEEEEEEEEE
T ss_pred EEEeCCCcc-ccc-CCc-eEEEEEEeCEEEEEECC----C--CEEEECCCCEEEECCCCcEEEEeCCCeeEEE
Confidence 456677653 356 664 99999999999999841 2 5899999999999999999999976544333
No 99
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=98.86 E-value=8.8e-09 Score=80.29 Aligned_cols=89 Identities=11% Similarity=0.124 Sum_probs=70.0
Q ss_pred CCCceEEEEeccccCCCCCceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEE
Q 048039 58 PMGSKATPVYVQQIPGLNTLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVF 137 (204)
Q Consensus 58 ~~g~~~~~~~~~~~P~l~~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~ 137 (204)
..|.++..+... +. .+..+.+++++||+..+.|+|++ .|.+|||+|++.+. . + ...+++||.++.
T Consensus 26 ~~Gv~~~~L~~d--~~---~g~~v~lvr~~pG~~~p~H~H~g-~ee~~VL~G~~~~~---e---~---~~~~~~Gd~~~~ 90 (159)
T 3ebr_A 26 SNDVMVKYFKID--PV---RGETITLLKAPAGMEMPRHHHTG-TVIVYTVQGSWRYK---E---H---DWVAHAGSVVYE 90 (159)
T ss_dssp CSSSEEEEEEEE--TT---TTEEEEEEEECSSCBCCCEEESS-CEEEEEEESCEEET---T---S---SCCBCTTCEEEE
T ss_pred CCCEEEEEeeEc--CC---CCeEEEEEEECCCCCcccccCCC-CEEEEEEEeEEEEe---C---C---CeEECCCeEEEE
Confidence 346666665422 11 14567889999999999999998 89999999998862 1 2 248999999999
Q ss_pred CCCCeEEEEeC--CCCCEEEEEEEcC
Q 048039 138 PMGLLHYQRNV--GKVNAVAIAALNS 161 (204)
Q Consensus 138 p~g~~H~~~N~--g~~~a~~i~~~~s 161 (204)
|+|..|...+. +++.++++.+...
T Consensus 91 P~g~~H~~~~~~~~~e~~~~~~~~~G 116 (159)
T 3ebr_A 91 TASTRHTPQSAYAEGPDIITFNIVAG 116 (159)
T ss_dssp CSSEEECEEESSSSSSCEEEEEEEES
T ss_pred CCCCcceeEeCCCCCCCEEEEEEecC
Confidence 99999999998 7789988886553
No 100
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=98.80 E-value=9.3e-09 Score=82.60 Aligned_cols=70 Identities=17% Similarity=0.200 Sum_probs=60.6
Q ss_pred EEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEEE
Q 048039 79 LSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIAA 158 (204)
Q Consensus 79 ~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~~ 158 (204)
..+..++++||+..|.|+|++ .|+.|||+|++. + +...+.+||++++|+|..|...+.+.+.++++++
T Consensus 125 ~~v~l~~~~pG~~~p~H~H~g-~E~~~VL~G~f~----d-------e~~~~~~Gd~~~~p~g~~H~p~a~~~~gc~~l~~ 192 (195)
T 2q1z_B 125 AIARLLWIPGGQAVPDHGHRG-LELTLVLQGAFR----D-------ETDRFGAGDIEIADQELEHTPVAERGLDCICLAA 192 (195)
T ss_dssp SEEEEEEECTTCBCCCCCCSS-CEEEEEEESEEE----C-------SSSEEETTCEEEECSSCCCCCEECSSSCEEEEEE
T ss_pred cEEEEEEECCCCCCCCcCCCC-eEEEEEEEEEEE----C-------CcEEECCCeEEEeCcCCccCCEeCCCCCEEEEEE
Confidence 356789999999999999987 999999999965 2 1457999999999999999999877889999887
Q ss_pred Ec
Q 048039 159 LN 160 (204)
Q Consensus 159 ~~ 160 (204)
++
T Consensus 193 ~d 194 (195)
T 2q1z_B 193 TD 194 (195)
T ss_dssp EC
T ss_pred ec
Confidence 64
No 101
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=98.79 E-value=5e-09 Score=78.30 Aligned_cols=67 Identities=15% Similarity=0.124 Sum_probs=54.1
Q ss_pred eEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCC
Q 048039 78 GLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVN 152 (204)
Q Consensus 78 g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~ 152 (204)
.++....+..||... +|.|.. .|++|||+|++++.+.+ + +...|++||++++|+|..|.+.|.++..
T Consensus 48 ~~~~g~w~~~pG~~~-~~~~~~-~E~~~Vl~G~~~l~~~~----g--~~~~l~~GD~~~ip~g~~h~~~~~~~~r 114 (123)
T 3bcw_A 48 KVESGVWESTSGSFQ-SNTTGY-IEYCHIIEGEARLVDPD----G--TVHAVKAGDAFIMPEGYTGRWEVDRHVK 114 (123)
T ss_dssp TEEEEEEEEEEEEEE-CCCTTE-EEEEEEEEEEEEEECTT----C--CEEEEETTCEEEECTTCCCEEEEEEEEE
T ss_pred CEEEEEEEECCCcee-eEcCCC-cEEEEEEEEEEEEEECC----C--eEEEECCCCEEEECCCCeEEEEECCcee
Confidence 466777788888643 566654 89999999999998731 3 5899999999999999999999986543
No 102
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.78 E-value=4.5e-08 Score=85.12 Aligned_cols=75 Identities=15% Similarity=0.161 Sum_probs=62.4
Q ss_pred eEEEEEEEECCC---CCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEE
Q 048039 78 GLSMVRVDFAPD---GLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAV 154 (204)
Q Consensus 78 g~s~~~~~i~pg---~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~ 154 (204)
.+++.++++.++ +..+.|.|+. .|++||++|++++.+. +. +.+.|++||++++|+|.+|.+.|.++. +.
T Consensus 248 ~f~~~~i~~~~~~~g~~~~~h~~~~-~~~~~vleG~~~i~i~-----g~-~~~~l~~Gd~~~iPag~~h~~~~~~~~-~~ 319 (350)
T 1juh_A 248 NYTLSTISMSTTPSTVTVPTWSFPG-ACAFQVQEGRVVVQIG-----DY-AATELGSGDVAFIPGGVEFKYYSEAYF-SK 319 (350)
T ss_dssp CEEEEEEEECCCCTTSCCCCBCCSS-CEEEEEEESCEEEEET-----TS-CCEEECTTCEEEECTTCCEEEEESSSS-EE
T ss_pred EEEEEEEeeccccCCCCCCcccCCC-cEEEEEEeeEEEEEEC-----Ce-EEEEeCCCCEEEECCCCCEEEEecCCe-EE
Confidence 467888888874 4688899987 9999999999999996 31 489999999999999999999998654 66
Q ss_pred EEEEEc
Q 048039 155 AIAALN 160 (204)
Q Consensus 155 ~i~~~~ 160 (204)
++.+.+
T Consensus 320 ~l~~~~ 325 (350)
T 1juh_A 320 VLFVSS 325 (350)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 666655
No 103
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=98.78 E-value=6.5e-08 Score=75.93 Aligned_cols=61 Identities=21% Similarity=0.261 Sum_probs=52.2
Q ss_pred EECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCC
Q 048039 85 DFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVG 149 (204)
Q Consensus 85 ~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g 149 (204)
.-.|++...+|.|+. +|++||++|++++.+.+. ++.....|++||++++|+|++|+-...+
T Consensus 41 v~Gpn~r~d~H~h~~-dE~FyvlkG~m~i~v~d~---g~~~~v~l~eGE~f~lP~gvpH~P~r~~ 101 (174)
T 1yfu_A 41 VGGPNHRTDYHDDPL-EEFFYQLRGNAYLNLWVD---GRRERADLKEGDIFLLPPHVRHSPQRPE 101 (174)
T ss_dssp ECSCBCCCCEEECSS-CEEEEEEESCEEEEEEET---TEEEEEEECTTCEEEECTTCCEEEEBCC
T ss_pred EcCCCcCccCcCCCC-ceEEEEEeeEEEEEEEcC---CceeeEEECCCCEEEeCCCCCcCccccC
Confidence 346888899998875 999999999999999863 3346899999999999999999986654
No 104
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=98.75 E-value=1.7e-08 Score=79.18 Aligned_cols=88 Identities=24% Similarity=0.291 Sum_probs=66.6
Q ss_pred CceEEEEeccccCCCCCceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECC
Q 048039 60 GSKATPVYVQQIPGLNTLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPM 139 (204)
Q Consensus 60 g~~~~~~~~~~~P~l~~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~ 139 (204)
|..+..+.. .+. .+..+.+++++||+..++|+|++ .|.+|||+|++... + . ..+.+++||.++.|+
T Consensus 29 GV~~~~L~~--~~~---~g~~v~lvr~~pG~~~p~H~H~g-~ee~~VL~G~f~~~--~----~--~~~~~~aGd~~~~P~ 94 (165)
T 3cjx_A 29 GTDIFPLFM--DPY---NGLMVMRASFAPGLTLPLHFHTG-TVHMYTISGCWYYT--E----Y--PGQKQTAGCYLYEPG 94 (165)
T ss_dssp TEEEEEEEE--ETT---TTEEEEEEEECTTCBCCEEEESS-CEEEEEEESEEEET--T----C--TTSCEETTEEEEECT
T ss_pred CEEEEEeEe--CCC---CCcEEEEEEECCCCcCCcccCCC-CEEEEEEEEEEEEC--C----C--ceEEECCCeEEEeCC
Confidence 555555532 222 24567889999999999999997 99999999999862 1 1 146789999999999
Q ss_pred CCeEEEEeCC--CCCEEEEEEEcC
Q 048039 140 GLLHYQRNVG--KVNAVAIAALNS 161 (204)
Q Consensus 140 g~~H~~~N~g--~~~a~~i~~~~s 161 (204)
|..|...+.. +++|+.+.+...
T Consensus 95 g~~H~~~a~~~~~~gci~l~v~~G 118 (165)
T 3cjx_A 95 GSIHQFNTPRDNEGQTEVIFMLSG 118 (165)
T ss_dssp TCEECEECCTTCSSCEEEEEEEES
T ss_pred CCceeeEeCCCCCCCcEEEEEEec
Confidence 9999998854 347877776553
No 105
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=98.75 E-value=3.8e-09 Score=80.92 Aligned_cols=91 Identities=13% Similarity=-0.026 Sum_probs=65.9
Q ss_pred CCceEEEEeccccCCCCCceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEEC
Q 048039 59 MGSKATPVYVQQIPGLNTLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFP 138 (204)
Q Consensus 59 ~g~~~~~~~~~~~P~l~~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p 138 (204)
.|..+..+... +. .+-.+.+++++||+..+.|+|++ .|.+|||+|+++...+ .......+++||.+++|
T Consensus 29 ~Gv~~~~L~~~--~~---~g~~~~~~~~~pG~~~p~H~H~~-~ee~~VL~G~~~~~~g-----~~~~~~~~~~Gd~~~~p 97 (145)
T 2o1q_A 29 GGIRWKLLHVS--PE---MGSWTAIFDCPAGSSFAAHVHVG-PGEYFLTKGKMDVRGG-----KAAGGDTAIAPGYGYES 97 (145)
T ss_dssp SCCEEEEEEEE--TT---TTEEEEEEEECTTEEECCEEESS-CEEEEEEEEEEEETTC-----GGGTSEEEESSEEEEEC
T ss_pred CCcEEEEeeEC--CC---cccEEEEEEECCCCCCCccCCCC-CEEEEEEEeEEEEcCC-----CEecceEeCCCEEEEEC
Confidence 45556555322 21 13357789999999999999997 7779999999996432 11013899999999999
Q ss_pred CCCeEE-EEeCCCCCEEEEEEEcCC
Q 048039 139 MGLLHY-QRNVGKVNAVAIAALNSQ 162 (204)
Q Consensus 139 ~g~~H~-~~N~g~~~a~~i~~~~s~ 162 (204)
+|..|. ..+ .+.++++.+++..
T Consensus 98 ~g~~H~p~~~--~e~~~~l~~~~gp 120 (145)
T 2o1q_A 98 ANARHDKTEF--PVASEFYMSFLGP 120 (145)
T ss_dssp TTCEESCCEE--EEEEEEEEEEESC
T ss_pred cCCccCCeEC--CCCeEEEEEECCc
Confidence 999999 543 3557777777644
No 106
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=98.74 E-value=9.5e-08 Score=67.90 Aligned_cols=72 Identities=15% Similarity=0.214 Sum_probs=62.3
Q ss_pred eEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEEEEcCC-CCCceecc---cccccCCCCCCHHHHHHhcCCCHHHHHHHH
Q 048039 125 FSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIAALNSQ-NPGTSSIA---PALFTSKPVLNDEIISKTFLFDKKNVAILR 200 (204)
Q Consensus 125 ~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~~~~s~-~pg~~~~~---~~~f~~~p~~~~~vl~~~f~~~~~~v~~l~ 200 (204)
....|++||+++||+|.+-...+.. ...++++-.+. ++....++ .+++.. ||.++|+.+|+++.+++++|+
T Consensus 6 ~~~~l~~G~v~vVPq~~~v~~~A~~--~le~v~F~tna~~~~~~~LAG~~~Svl~~---l~~evla~aF~~s~ee~~~l~ 80 (93)
T 1dgw_Y 6 YAATLSEGDIIVIPSSFPVALKAAS--DLNMVGIGVNAENNERNFLAGHKENVIRQ---IPRQVSDLTFPGSGEEVEELL 80 (93)
T ss_dssp EEEEECTTCEEEECTTCCEEEEESS--SEEEEEEEESCTTCCEEESSSSTTBSTTT---SCHHHHHHHSSSCTHHHHHHT
T ss_pred hhceecCCcEEEECCCCceeEEecC--CeEEEEEEecCCCCeeeeccCCcccHHHh---CCHHHHHHHcCCCHHHHHHHH
Confidence 5789999999999999999999864 48888885444 88888885 588886 999999999999999999997
Q ss_pred h
Q 048039 201 S 201 (204)
Q Consensus 201 ~ 201 (204)
.
T Consensus 81 ~ 81 (93)
T 1dgw_Y 81 E 81 (93)
T ss_dssp T
T ss_pred h
Confidence 5
No 107
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=98.72 E-value=7e-09 Score=82.37 Aligned_cols=71 Identities=21% Similarity=0.202 Sum_probs=56.1
Q ss_pred CCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEEEEcCCCCCce
Q 048039 92 NPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIAALNSQNPGTS 167 (204)
Q Consensus 92 ~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~~~~s~~pg~~ 167 (204)
.++|+|+. .|+.||++|++.+.+.. + ++.....+++||++++|+|+.|++.+..+.....+-+|... |++.
T Consensus 93 ~~~H~H~~-~Ei~~Vl~G~g~~~i~~-~--d~~~~~~l~~GDli~IP~g~~H~~~~~~~~~~~~ir~F~~~-~~w~ 163 (179)
T 1zrr_A 93 LNEHTHGE-DEVRFFVEGAGLFCLHI-G--DEVFQVLCEKNDLISVPAHTPHWFDMGSEPNFTAIRIFDNP-EGWI 163 (179)
T ss_dssp HSCBEESS-CEEEEEEESCCCCCEEC-S--SCEEEEECCCSCEEEECTTCCBCCCCSSCSSCEEEEEECCG-GGEE
T ss_pred ccceECCh-heEEEEEcceEEEEEEe-C--CEEEEEEECCCCEEEECCCCeEeeecCCCceEEEEEeccCC-CCcc
Confidence 47999997 99999999999998851 1 33345779999999999999999988666667777777644 6653
No 108
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=98.72 E-value=3.8e-08 Score=77.75 Aligned_cols=83 Identities=17% Similarity=0.254 Sum_probs=62.9
Q ss_pred EEEEEEEECCCCCCCCccCCC------CcEEEEEEeCcEEEEEEecCCC--------C------ceeEEEeCCCcEEEEC
Q 048039 79 LSMVRVDFAPDGLNPPHTHPR------ASEIMTLLEGTLEVGFIGTAPD--------Y------RHFSKILNKGDVFVFP 138 (204)
Q Consensus 79 ~s~~~~~i~pg~~~ppH~H~~------a~E~~yVl~G~~~~~~~~~~~~--------~------~~~~~~L~~Gd~~~~p 138 (204)
....++.+.||+..|.|.|+. -.|-++|+.|++++.+.+..-+ + ......|+|||++.+|
T Consensus 53 Y~~K~l~l~pGQ~~P~H~H~~~~~~~gK~E~~ivr~G~v~l~~~g~~~~~~~v~v~dg~~~~~~a~~~i~L~pGesvtIp 132 (175)
T 2y0o_A 53 YCSKELVLFPGQTCPEHRHPPVDGQEGKQETFRCRYGKVYLYVEGEKTPLPKVLPPQEDREHYTVWHEIELEPGGQYTIP 132 (175)
T ss_dssp EEEEEEEECTTCEEEEEECCCCTTSCCCCEEEEEEEEEEEEEESSSCCSSCSCCCCGGGGGGCCCCEEEEECTTCEEEEC
T ss_pred ceEEEEEECCCCcCCceECCCCCCCCCCceeEEEecCEEEEEECCccccCcceeccCCceeeecCCcEEEECCCCEEEEC
Confidence 567788999999999999997 7899999999999988431100 0 0034699999999999
Q ss_pred CCCeEEEEeCCCCCEEEEEEEcCCC
Q 048039 139 MGLLHYQRNVGKVNAVAIAALNSQN 163 (204)
Q Consensus 139 ~g~~H~~~N~g~~~a~~i~~~~s~~ 163 (204)
+|+.|+++| +.+. +++.-+++.+
T Consensus 133 pg~~H~f~a-geeg-vli~EvSt~~ 155 (175)
T 2y0o_A 133 PNTKHWFQA-GEEG-AVVTEMSSTS 155 (175)
T ss_dssp TTCCEEEEE-EEEE-EEEEEEEECC
T ss_pred CCCcEEEEe-CCCC-EEEEEEeCCC
Confidence 999999999 3333 5555555443
No 109
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=98.71 E-value=1.3e-08 Score=78.76 Aligned_cols=107 Identities=12% Similarity=-0.036 Sum_probs=75.0
Q ss_pred CCCCCcEEeccCCCCCCCC-CCCceEEEEeccccCCCCCceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEe
Q 048039 39 AHADDFYFTGLDKQGNFSN-PMGSKATPVYVQQIPGLNTLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIG 117 (204)
Q Consensus 39 ~~~~df~~~~~~~~~~~~~-~~g~~~~~~~~~~~P~l~~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~ 117 (204)
+..++..|. |.+... ..|..+..+... |. .|....+++++||+..++|+|+. .|.+|||+|++....++
T Consensus 14 v~~d~~~W~----p~P~~l~~~Gv~~k~L~~~--~e---~g~~t~lvr~~pG~~~p~H~H~g-~ee~~VL~G~~~~~~Gd 83 (153)
T 3bal_A 14 VKISDNNYV----PFPEAFSDGGITWQLLHSS--PE---TSSWTAIFNCPAGSSFASHIHAG-PGEYFLTKGKMEVRGGE 83 (153)
T ss_dssp EECCGGGCE----ECCGGGEESCCEEEEEEEE--TT---TTEEEEEEEECTTEEECCEEESS-CEEEEEEESEEEETTCG
T ss_pred EccccCcee----cCCCccCCCCeEEEEEEEC--Cc---cceEEEEEEeCCCCCccCccCCC-CEEEEEEEEEEEecCcc
Confidence 456666676 222111 457777777432 32 36778899999999999999998 88899999999886432
Q ss_pred cCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEEEEcC
Q 048039 118 TAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIAALNS 161 (204)
Q Consensus 118 ~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~~~~s 161 (204)
......+++|+.++.|+|..|..... ++..+++.+...
T Consensus 84 -----~~~~~~~~aGsYv~ePpGs~H~p~~~-~~~~~~~~~~~G 121 (153)
T 3bal_A 84 -----QEGGSTAYAPSYGFESSGALHGKTFF-PVESQFYMTFLG 121 (153)
T ss_dssp -----GGTSEEEESSEEEEECTTCEESCCEE-SSCEEEEEEEES
T ss_pred -----ccCccccCCCeEEEcCCCCcccceeC-CCCeEEEEEEEC
Confidence 11257889999999999999984332 334455555443
No 110
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=98.71 E-value=2.6e-07 Score=72.80 Aligned_cols=86 Identities=17% Similarity=0.276 Sum_probs=72.6
Q ss_pred eEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCc---eeEEEeCCCcEEEECCCCeEEEEeCCCCCEE
Q 048039 78 GLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYR---HFSKILNKGDVFVFPMGLLHYQRNVGKVNAV 154 (204)
Q Consensus 78 g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~---~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~ 154 (204)
++++..+...||...++|-|.++..+++|++|+++..+-...+ ++ ..+..+.+||++++|++.+|++.|.++++++
T Consensus 68 ~~~v~~l~W~PGq~S~iHdH~~s~~~~~VL~G~l~e~~y~~~~-~~~~~~~~~~l~~G~~~~~~~~~iH~V~N~~~~~aV 146 (171)
T 3eqe_A 68 ELEIIVINIPPNKETTVHDHGQSIGCAMVLEGKLLNSIYRSTG-EHAELSNSYFVHEGECLISTKGLIHKMSNPTSERMV 146 (171)
T ss_dssp SCEEEEEEECTTCBCCEECCTTCEEEEEEEESEEEEEEEEECS-SSEEEEEEEEEETTCEEEECTTCEEEEECCSSSCEE
T ss_pred CeEEEEEEECCCCCcccccCCCceEEEEEEeeeEEEEEeecCC-CceeecceEEeCCCcEEEeCCCCEEEEECCCCCCEE
Confidence 5688999999999999999998788999999999987543221 21 1478899999999999999999999999999
Q ss_pred EEEEEcCCCC
Q 048039 155 AIAALNSQNP 164 (204)
Q Consensus 155 ~i~~~~s~~p 164 (204)
-|-+++....
T Consensus 147 SlHvY~pp~~ 156 (171)
T 3eqe_A 147 SLHVYSPPLE 156 (171)
T ss_dssp EEEEEESCCC
T ss_pred EEEEeCCCcc
Confidence 9999986654
No 111
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=98.57 E-value=7.7e-07 Score=77.87 Aligned_cols=72 Identities=17% Similarity=0.085 Sum_probs=63.2
Q ss_pred eEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEE
Q 048039 78 GLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIA 157 (204)
Q Consensus 78 g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~ 157 (204)
-|.+....++||...++|.|.. .++++|++|++++.++ + +.+..++||+|++|++..|...|. +++.+++
T Consensus 278 ti~~~~~~L~pG~~t~~hRht~-s~Vy~V~eG~G~~~I~-----~--~~~~w~~gD~fvvP~w~~h~~~n~--~~a~Lf~ 347 (368)
T 3nw4_A 278 TLRCEFHRLRAGTETATRNEVG-STVFQVFEGAGAVVMN-----G--ETTKLEKGDMFVVPSWVPWSLQAE--TQFDLFR 347 (368)
T ss_dssp SCEEEEEEECTTCBCCCEEESS-CEEEEEEESCEEEEET-----T--EEEEECTTCEEEECTTCCEEEEES--SSEEEEE
T ss_pred hHHhheEEECCCCccCCeeccc-cEEEEEEeCcEEEEEC-----C--EEEEecCCCEEEECCCCcEEEEeC--CCEEEEE
Confidence 3566678899999999999986 8999999999999985 3 689999999999999999999996 6788877
Q ss_pred EE
Q 048039 158 AL 159 (204)
Q Consensus 158 ~~ 159 (204)
+-
T Consensus 348 ~~ 349 (368)
T 3nw4_A 348 FS 349 (368)
T ss_dssp EE
T ss_pred Ee
Confidence 63
No 112
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=98.54 E-value=4.5e-07 Score=78.03 Aligned_cols=77 Identities=21% Similarity=0.189 Sum_probs=64.7
Q ss_pred EEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCC-C---cEEEECCCCeEEEEeCCCCCEEEE
Q 048039 81 MVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNK-G---DVFVFPMGLLHYQRNVGKVNAVAI 156 (204)
Q Consensus 81 ~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~-G---d~~~~p~g~~H~~~N~g~~~a~~i 156 (204)
....+..||....+|||....|.++|++|++.+.+.+... + +...+.. | +.+++|+|..|.+.|.|+++++++
T Consensus 274 ~~ls~~~~g~~rg~h~h~~~~e~~~~~~G~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~ip~g~~h~~~n~~~~~~~~~ 350 (369)
T 3st7_A 274 VSVNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVND-D--EIIEYYVSGDKLEVVDIPVGYTHNIENLGDTDMVTI 350 (369)
T ss_dssp EEEEEECTTCEEEEEECSSCCEEEEEEESEEEEEEEETTC-C--CCEEEEEETTBCCEEEECTTEEEEEEECSSSCEEEE
T ss_pred EEEEEecCCceeccccccCcceEEEEEeeeEEEEEEcCCC-C--cEEEEEecCCcceEEEeCCCceEEeEEcCCCcEEEE
Confidence 4556789999999999998899999999999998875431 3 5666666 7 899999999999999999999888
Q ss_pred EEEc
Q 048039 157 AALN 160 (204)
Q Consensus 157 ~~~~ 160 (204)
...+
T Consensus 351 ~~~~ 354 (369)
T 3st7_A 351 MWVN 354 (369)
T ss_dssp EEES
T ss_pred EecC
Confidence 7654
No 113
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=98.53 E-value=8.2e-07 Score=69.60 Aligned_cols=62 Identities=18% Similarity=0.345 Sum_probs=49.9
Q ss_pred ECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecC-CCCceeEEEeCCCcEEEECCCCeEEEEeC
Q 048039 86 FAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTA-PDYRHFSKILNKGDVFVFPMGLLHYQRNV 148 (204)
Q Consensus 86 i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~-~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~ 148 (204)
-.|+....+|.|+. +|++|+++|++.+.+.+.+ .+.+.+...|++||++++|+|++|+-...
T Consensus 41 gGPn~r~D~H~~~~-eE~Fy~lkG~m~l~v~d~g~~~~~~~dv~i~eGdmfllP~gvpHsP~r~ 103 (176)
T 1zvf_A 41 GGPNERTDYHINPT-PEWFYQKKGSMLLKVVDETDAEPKFIDIIINEGDSYLLPGNVPHSPVRF 103 (176)
T ss_dssp CSSBCCSCEEECSS-CEEEEEEESCEEEEEEECSSSSCEEEEEEECTTEEEEECTTCCEEEEEC
T ss_pred cCCCcCCcCcCCCC-ceEEEEEeCEEEEEEEcCCCcccceeeEEECCCCEEEcCCCCCcCCccc
Confidence 35678899996665 9999999999999998631 00034689999999999999999997654
No 114
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=98.52 E-value=1.6e-06 Score=70.27 Aligned_cols=83 Identities=19% Similarity=0.203 Sum_probs=69.0
Q ss_pred eEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCc----eeEEEeCCCcEEEECC--CCeEEEEeC-CC
Q 048039 78 GLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYR----HFSKILNKGDVFVFPM--GLLHYQRNV-GK 150 (204)
Q Consensus 78 g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~----~~~~~L~~Gd~~~~p~--g~~H~~~N~-g~ 150 (204)
.+++..+...||...++|-|.. ..+++|++|+++..+-....+++ ..+..|.+|+++++++ |.+|.+.|. ++
T Consensus 78 ~~~v~~l~w~PGq~spiHdH~~-~~~~~VL~G~l~e~~y~~~~~g~~l~~~~~~~l~~G~v~~~~~~~g~iH~V~N~~~~ 156 (208)
T 2gm6_A 78 RFSIVSFVWGPGQRTPIHDHTV-WGLIGMLRGAEYSQPFVLDGSGRPVLHGEPTRLEPGHVEAVSPTVGDIHRVHNAYDD 156 (208)
T ss_dssp SCEEEEEEECTTCBCCSBCCSS-CEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSS
T ss_pred CEEEEEEEeCCCcccCcccCCc-ceEEEEecccEEEEEeecCCCCccccccceEEeCCCCEEEECCCCCCeEEeccCCCC
Confidence 5788899999999999999987 99999999999887643111121 1378999999999999 999999998 68
Q ss_pred CCEEEEEEEcC
Q 048039 151 VNAVAIAALNS 161 (204)
Q Consensus 151 ~~a~~i~~~~s 161 (204)
++++.|-+|..
T Consensus 157 ~~avsLHvY~~ 167 (208)
T 2gm6_A 157 RVSISIHVYGA 167 (208)
T ss_dssp SCEEEEEEESS
T ss_pred CcEEEEEEEcC
Confidence 89999988864
No 115
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=98.51 E-value=5.7e-07 Score=68.25 Aligned_cols=61 Identities=15% Similarity=0.039 Sum_probs=51.1
Q ss_pred CCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCC-CCEEEEEEEcC
Q 048039 93 PPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGK-VNAVAIAALNS 161 (204)
Q Consensus 93 ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~-~~a~~i~~~~s 161 (204)
.+|.|+. .|++||++|++++.++ + +.+.+++||++++|+|.+|.+.+.++ ++...+++.-+
T Consensus 32 ~p~~h~~-~~i~~v~~G~~~~~i~-----~--~~~~l~~Gd~~~i~p~~~H~~~~~~~~~~~~~~~i~f~ 93 (164)
T 2arc_A 32 RPLGMKG-YILNLTIRGQGVVKNQ-----G--REFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVYFR 93 (164)
T ss_dssp ETTCCSS-EEEEEEEEECEEEEET-----T--EEEEECTTCEEEECTTCCEEEEECTTSSEEEEEEEEEC
T ss_pred cccCCCc-eEEEEEEEeEEEEEEC-----C--EEEEecCCeEEEEcCCCCEEEEeCCCCCcEEEEEEEEC
Confidence 4899986 9999999999999985 3 69999999999999999999988763 66666665543
No 116
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=98.44 E-value=5.8e-07 Score=68.12 Aligned_cols=78 Identities=14% Similarity=0.231 Sum_probs=57.5
Q ss_pred EEEEEECC----CCCCCCccCCCCcEEEEEEeCcEEEEEEecCC-CCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEE
Q 048039 81 MVRVDFAP----DGLNPPHTHPRASEIMTLLEGTLEVGFIGTAP-DYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVA 155 (204)
Q Consensus 81 ~~~~~i~p----g~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~-~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~ 155 (204)
++...+.| ++...+|.|+...|+++|++|++++.+.+... ..+-....|++|+++++|+|+-|.-... +.+.+
T Consensus 27 Va~~n~~~~~~~~~i~~~h~H~~tDE~Fivl~G~l~i~~rd~~~~~~~d~~V~l~~Ge~yvVPkGveH~p~a~--~e~~v 104 (140)
T 3d0j_A 27 VCIKNWKPDNDIEGIAHLEIHHSTDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYNVPAECWFYSITQ--KDTKM 104 (140)
T ss_dssp EEEEECCGGGBTTTCCEEEEESSCCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEEECTTCEEEEEEC--TTCEE
T ss_pred EEEEeccCcCCcccCHhhccCCCCCeEEEEEecEEEEEEecCcCCCCccceEEecCCCEEEeCCCccCcccCC--CceEE
Confidence 44444444 35678999999999999999999999974210 0012479999999999999999998874 45566
Q ss_pred EEEEc
Q 048039 156 IAALN 160 (204)
Q Consensus 156 i~~~~ 160 (204)
+.+=.
T Consensus 105 LLiEp 109 (140)
T 3d0j_A 105 MYVQD 109 (140)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 55533
No 117
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=98.42 E-value=1.5e-06 Score=71.16 Aligned_cols=84 Identities=18% Similarity=0.173 Sum_probs=64.9
Q ss_pred CCceEEEEeccccCCCCCceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEEC
Q 048039 59 MGSKATPVYVQQIPGLNTLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFP 138 (204)
Q Consensus 59 ~g~~~~~~~~~~~P~l~~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p 138 (204)
.|.+...+... +. ..+....+++++||+..|+|+|++ .|.+|||+|++. + + ...+.+||.++.|
T Consensus 27 ~Gv~~~~L~~~--~~--e~g~~~~lvr~~pG~~~p~H~H~g-~Ee~~VL~G~f~----d----~---~~~~~~Gd~~~~P 90 (223)
T 3o14_A 27 KGVERRMLDRI--GG--EVARATSIVRYAPGSRFSAHTHDG-GEEFIVLDGVFQ----D----E---HGDYPAGTYVRNP 90 (223)
T ss_dssp TTEEEEEEEEE--SS--SSCEEEEEEEECTTEECCCEECTT-CEEEEEEEEEEE----E----T---TEEEETTEEEEEC
T ss_pred CCEEEEEeecC--CC--ccccEEEEEEECCCCCcccccCCC-CEEEEEEEeEEE----E----C---CeEECCCeEEEeC
Confidence 46666555322 21 124456789999999999999997 899999999976 2 1 3589999999999
Q ss_pred CCCeEEEEeCCCCCEEEEEEEc
Q 048039 139 MGLLHYQRNVGKVNAVAIAALN 160 (204)
Q Consensus 139 ~g~~H~~~N~g~~~a~~i~~~~ 160 (204)
+|..|.... ++.|.++..+.
T Consensus 91 ~g~~H~p~a--~~gc~~~vk~~ 110 (223)
T 3o14_A 91 PTTSHVPGS--AEGCTIFVKLW 110 (223)
T ss_dssp TTCEECCEE--SSCEEEEEEES
T ss_pred CCCccccEe--CCCCEEEEEec
Confidence 999998776 56788888775
No 118
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=98.34 E-value=3.2e-06 Score=70.95 Aligned_cols=68 Identities=19% Similarity=0.406 Sum_probs=55.4
Q ss_pred CCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEEEEc
Q 048039 87 APDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIAALN 160 (204)
Q Consensus 87 ~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~~~~ 160 (204)
.|+....+| |...+|++|+++|.+.+.+.+. ++.+...|++||++++|+|++|.-... +.++.+.+=.
T Consensus 39 GpN~R~d~H-~~~~dE~FyqlkG~m~l~~~d~---g~~~~V~i~eGemfllP~gv~HsP~r~--~et~gLviE~ 106 (286)
T 2qnk_A 39 GPNTRKDYH-IEEGEEVFYQLEGDMVLRVLEQ---GKHRDVVIRQGEIFLLPARVPHSPQRF--ANTVGLVVER 106 (286)
T ss_dssp SCBCCCCEE-ECSSCEEEEEEESCEEEEEEET---TEEEEEEECTTEEEEECTTCCEEEEEC--TTCEEEEEEE
T ss_pred CCCcCccCc-CCCCCeEEEEEeCeEEEEEEeC---CceeeEEECCCeEEEeCCCCCcCCccc--CCeEEEEEee
Confidence 566678999 8888999999999999999874 445789999999999999999998764 3445554433
No 119
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=98.29 E-value=1.7e-05 Score=63.87 Aligned_cols=88 Identities=15% Similarity=0.158 Sum_probs=71.4
Q ss_pred eEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCC-----ceeEEEeCCCcEEEE-CCCCeEEEEeCC-C
Q 048039 78 GLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDY-----RHFSKILNKGDVFVF-PMGLLHYQRNVG-K 150 (204)
Q Consensus 78 g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~-----~~~~~~L~~Gd~~~~-p~g~~H~~~N~g-~ 150 (204)
.+++..+...||...++|-|.++..+++|++|+++-..-+-.+++ ...+..+.+||+.++ |++-+|.+.|.+ +
T Consensus 69 ~~~l~ll~W~PGq~SpiHDH~~s~g~i~VL~G~l~e~~y~~~~~~~~~l~~~~~~~l~~G~v~~~~~~~giH~V~N~s~~ 148 (200)
T 3eln_A 69 KFNLMILCWGEGHGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKSNEMIKKSERTLRENQCAYINDSIGLHRVENVSHT 148 (200)
T ss_dssp TCEEEEEEECTTCBCCEECCTTCEEEEEEEESCEEEEEECCCCSSCCCCCEEEEEEECTTCEEEECTTTCEEEEECCCSS
T ss_pred ceEEEEEEECCCCcCCCccCCCceEEEEEEeeeEEEEEeecCCCCcccccccceEEeCCCCEEEecCCCcEEEEECCCCC
Confidence 477888999999999999999779999999999998764311101 123789999999999 888899999998 7
Q ss_pred CCEEEEEEEcCCCCC
Q 048039 151 VNAVAIAALNSQNPG 165 (204)
Q Consensus 151 ~~a~~i~~~~s~~pg 165 (204)
++++-|=++.....+
T Consensus 149 ~~avSlHvY~pp~~~ 163 (200)
T 3eln_A 149 EPAVSLHLYSPPFDT 163 (200)
T ss_dssp CCEEEEEEEESCCSE
T ss_pred CCEEEEEeCCCCccc
Confidence 899988888765543
No 120
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=98.06 E-value=0.00012 Score=59.22 Aligned_cols=85 Identities=18% Similarity=0.209 Sum_probs=68.1
Q ss_pred eEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCce----eEEEeCCCcEEEECCC--CeEEEEeCC-C
Q 048039 78 GLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRH----FSKILNKGDVFVFPMG--LLHYQRNVG-K 150 (204)
Q Consensus 78 g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~----~~~~L~~Gd~~~~p~g--~~H~~~N~g-~ 150 (204)
.+++..+...||...++|-|. +.-++.|++|+++-.+-.-..++.. ....+.+||+.++.++ .+|.+.|.+ +
T Consensus 72 ~f~v~~l~W~PGq~spiHDH~-swg~~~Vl~G~l~e~~y~~~~~g~~~~~~~~~~l~~G~v~~~~p~~g~IH~V~N~~~d 150 (211)
T 3uss_A 72 RFSVVSFVWGPGQITPVHDHR-VWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRIGDVHQVSNAFSD 150 (211)
T ss_dssp SCEEEEEEECTTCBCCSBCCS-SCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSS
T ss_pred CEEEEEEEECCCCcCCCCCCC-eeEEEEeeeceEEEEEeeeCCCCCcccccceEEecCCCEEEECCCCCCEEEEccCCCC
Confidence 477888999999999999998 7999999999998866332111221 2488999999999987 899999984 7
Q ss_pred CCEEEEEEEcCCC
Q 048039 151 VNAVAIAALNSQN 163 (204)
Q Consensus 151 ~~a~~i~~~~s~~ 163 (204)
++++-|=+|....
T Consensus 151 ~~avSLHvYg~pl 163 (211)
T 3uss_A 151 RTSISIHVYGANI 163 (211)
T ss_dssp SCEEEEEEESSCG
T ss_pred CCEEEEEEcCCCC
Confidence 8888888886543
No 121
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=98.00 E-value=0.00011 Score=55.86 Aligned_cols=95 Identities=12% Similarity=0.051 Sum_probs=66.9
Q ss_pred CceEEEEec-cccCCCCCceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCc-EEEE
Q 048039 60 GSKATPVYV-QQIPGLNTLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGD-VFVF 137 (204)
Q Consensus 60 g~~~~~~~~-~~~P~l~~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd-~~~~ 137 (204)
.+.++.+.. ..+|.- -+. ......++||....+|.|....|++++++|++.+.+.+. ...++..|.+.. .+.+
T Consensus 17 RG~L~~~e~~~~ipf~-ikR-vy~~~~~~~g~~RG~H~Hk~~~q~li~l~Gs~~v~ldDg---~~~~~~~L~~~~~gL~I 91 (141)
T 2pa7_A 17 RGSLVAIEENKNIPFS-IKR-VYYIFDTKGEEPRGFHAHKKLEQVLVCLNGSCRVILDDG---NIIQEITLDSPAVGLYV 91 (141)
T ss_dssp TEEEEEEETTTTSSSC-CCE-EEEEESCCSSCCEEEEEESSCCEEEEEEESCEEEEEECS---SCEEEEEECCTTEEEEE
T ss_pred CCcEEEEeccCCCCCC-ccE-EEEEEecCCCCEECcCcCCCceEEEEEEccEEEEEEECC---cEEEEEEECCCCcEEEe
Confidence 455666654 345541 111 122234568888999999999999999999999999653 223567775554 6999
Q ss_pred CCCCeEEEEeCCCCCEEEEEEEc
Q 048039 138 PMGLLHYQRNVGKVNAVAIAALN 160 (204)
Q Consensus 138 p~g~~H~~~N~g~~~a~~i~~~~ 160 (204)
|+|+.|.+.+.++. ++++.+-+
T Consensus 92 ppgvWh~~~~~s~~-avllvlas 113 (141)
T 2pa7_A 92 GPAVWHEMHDFSSD-CVMMVLAS 113 (141)
T ss_dssp CTTCEEEEECCCTT-CEEEEEES
T ss_pred CCCEEEEEEEcCCC-eEEEEECC
Confidence 99999999998775 66666544
No 122
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.94 E-value=5.7e-05 Score=62.27 Aligned_cols=72 Identities=19% Similarity=0.182 Sum_probs=53.8
Q ss_pred eEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEE
Q 048039 78 GLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIA 157 (204)
Q Consensus 78 g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~ 157 (204)
++++-.+.+ .|..... .++. .|++||++|++++... + ....+++||+++||+|..|.+...+.- -.+++
T Consensus 46 ~~~~G~~~~-~g~~~v~-~~p~-dE~~~VleG~~~lt~~-----g--~~~~~~~Gd~~~ip~G~~~~w~~~~~~-~~~y~ 114 (238)
T 3myx_A 46 GIAAGIVEF-GTALSVE-AYPY-TEMLVMHRGSVTLTSG-----T--DSVTLSTGESAVIGRGTQVRIDAQPES-LWAFC 114 (238)
T ss_dssp SEEEEEEEE-CSEEEES-SCSS-EEEEEEEESEEEEEET-----T--EEEEEETTCEEEECTTCCEEEEECTTE-EEEEE
T ss_pred CeEEEEEEe-ccccccc-cCCC-cEEEEEEEeEEEEECC-----C--eEEEEcCCCEEEECCCCEEEEEecCCe-EEEEE
Confidence 567777777 5543321 2333 8999999999999862 4 699999999999999999999986554 34555
Q ss_pred EEc
Q 048039 158 ALN 160 (204)
Q Consensus 158 ~~~ 160 (204)
++.
T Consensus 115 ~~~ 117 (238)
T 3myx_A 115 AST 117 (238)
T ss_dssp EEC
T ss_pred ecc
Confidence 566
No 123
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=97.81 E-value=5e-05 Score=55.96 Aligned_cols=61 Identities=11% Similarity=0.023 Sum_probs=45.8
Q ss_pred EEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeC
Q 048039 80 SMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNV 148 (204)
Q Consensus 80 s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~ 148 (204)
..-.-+..||... ++.+.. .|++|||+|++++...+ + ....+++||+++||+|....+.-.
T Consensus 43 ~~GvWe~tPG~~~-~~~~~~-~E~~~iLeG~~~lt~dd----G--~~~~l~aGD~~~~P~G~~gtWev~ 103 (116)
T 3es4_A 43 IVAVWMAEPGIYN-YAGRDL-EETFVVVEGEALYSQAD----A--DPVKIGPGSIVSIAKGVPSRLEIL 103 (116)
T ss_dssp EEEEEEECSEEEE-ECCCSE-EEEEEEEECCEEEEETT----C--CCEEECTTEEEEECTTCCEEEEEC
T ss_pred EEEEEecCCceeE-CeeCCC-cEEEEEEEeEEEEEeCC----C--eEEEECCCCEEEECCCCeEEEEEe
Confidence 3444477777543 233332 59999999999998742 3 589999999999999999988754
No 124
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=97.71 E-value=0.00017 Score=59.46 Aligned_cols=74 Identities=5% Similarity=-0.094 Sum_probs=54.0
Q ss_pred EEEEEEEECCCC--CCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeC--CCCCEE
Q 048039 79 LSMVRVDFAPDG--LNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNV--GKVNAV 154 (204)
Q Consensus 79 ~s~~~~~i~pg~--~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~--g~~~a~ 154 (204)
+-+....+.... ..++|||.. -|++||++|+++ .+.+ .....+.+++||++++|+|.+|.+... ++++..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~-~~i~~v~~G~~~-~i~~----~~~~~~~l~~g~l~~i~p~~~h~~~~~~~~~~~~~ 80 (276)
T 3gbg_A 7 FQTNVYRMSKFDTYIFNNLYIND-YKMFWIDSGIAK-LIDK----NCLVSYEINSSSIILLKKNSIQRFSLTSLSDENIN 80 (276)
T ss_dssp EEEEEEEECTTCEEEEEEEECSS-CEEEEESSSCEE-EEET----TTTEEEEECTTEEEEECTTCEEEEEEEECCSSCEE
T ss_pred hhhhhhhhhcccchhccHhhhcc-eEEEEEecCceE-EECC----ccceeEEEcCCCEEEEcCCCceeeccccCCCcceE
Confidence 444555555544 357899987 999999999999 7752 111289999999999999999998765 445555
Q ss_pred EEEE
Q 048039 155 AIAA 158 (204)
Q Consensus 155 ~i~~ 158 (204)
.+.+
T Consensus 81 ~~~i 84 (276)
T 3gbg_A 81 VSVI 84 (276)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4444
No 125
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=97.63 E-value=0.0004 Score=54.57 Aligned_cols=77 Identities=12% Similarity=0.124 Sum_probs=60.9
Q ss_pred EEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCC----CceeEEEeC---CCcEEEECCCCeEEEEeCCCCCEEEE
Q 048039 84 VDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPD----YRHFSKILN---KGDVFVFPMGLLHYQRNVGKVNAVAI 156 (204)
Q Consensus 84 ~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~----~~~~~~~L~---~Gd~~~~p~g~~H~~~N~g~~~a~~i 156 (204)
....+|....+|+|....++++|++|++...++|-..+ ++.....|. ....+++|+|..|.+.+.++++++++
T Consensus 58 s~s~~GvlRG~H~h~~q~klv~~v~G~v~dv~vD~R~~SpTfg~~~~v~Ls~~~n~~~L~IP~G~aHgf~~lsd~~av~l 137 (174)
T 3ejk_A 58 SEVLPRRVKAWKRHSLMTQLFAVPVGCIHVVLYDGREKSPTSGRLAQVTLGRPDNYRLLRIPPQVWYGFAATGDTPALVA 137 (174)
T ss_dssp EEECBTCEEEEEEESSCCEEEEEEESEEEEEEECCCTTCTTTTCEEEEEEETTTBCEEEEECTTCEEEEEECTTSCEEEE
T ss_pred EECCCCCEECcEecCCCceEEEEEeeEEEEEEEeCCCCCCCCCeEEEEEECCccCceEEEeCCCcEEEEEEccCCCEEEE
Confidence 34478888899999878999999999999999873210 234678887 56799999999999999988777776
Q ss_pred EEEc
Q 048039 157 AALN 160 (204)
Q Consensus 157 ~~~~ 160 (204)
...+
T Consensus 138 y~~s 141 (174)
T 3ejk_A 138 NCTD 141 (174)
T ss_dssp EEES
T ss_pred EECC
Confidence 6544
No 126
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.53 E-value=0.00044 Score=56.93 Aligned_cols=63 Identities=21% Similarity=0.178 Sum_probs=49.1
Q ss_pred eEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeC
Q 048039 78 GLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNV 148 (204)
Q Consensus 78 g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~ 148 (204)
.++.-..+..||...+++++ ..|++|||+|++++...+ + ...++++||+++||+|..-.|.-.
T Consensus 166 ~~~~GiW~~tpG~~~~~~~~--~~E~~~ILeG~v~lt~~~----G--~~~~~~aGD~~~~P~G~~~tWev~ 228 (238)
T 3myx_A 166 TLRIGVWDSTPYERISRPHK--IHELMNLIEGRVVLSLEN----G--SSLTVNTGDTVFVAQGAPCKWTST 228 (238)
T ss_dssp SCEEEEEEECCEEBCCEECS--SCEEEEEEECCEEEEETT----S--CEEEECTTCEEEECTTCEEEEEES
T ss_pred CEEEeEEEeCCCEEECCcCC--CCEEEEEEEeEEEEEeCC----C--CEEEECCCCEEEECCCCEEEEEEC
Confidence 35666677788775444333 489999999999997632 3 589999999999999999888765
No 127
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=97.41 E-value=0.0054 Score=47.88 Aligned_cols=131 Identities=16% Similarity=0.129 Sum_probs=86.0
Q ss_pred CCCCceEEEEeccccC-CCCCceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCc-EEEEEEecCCCCceeEEE----eC
Q 048039 57 NPMGSKATPVYVQQIP-GLNTLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGT-LEVGFIGTAPDYRHFSKI----LN 130 (204)
Q Consensus 57 ~~~g~~~~~~~~~~~P-~l~~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~-~~~~~~~~~~~~~~~~~~----L~ 130 (204)
.|-|+..++.....-+ .-.....+..+.-+.+|....+|... +.|+.+...|. +++.+.+++ ++.+... +.
T Consensus 26 HPEGG~yret~rs~~~~~~~R~~~T~IYfLL~~g~~S~~HRv~-sdEiW~~~~G~pL~l~l~~~d--g~~~~~~LG~dv~ 102 (170)
T 1yud_A 26 HVEGGFYRSSYRSETAFDPSRQLWSSIYFLLRTGEVSHFHRLT-ADEMWYFHAGQSLTIYMISPE--GELTTAQLGLDLA 102 (170)
T ss_dssp CTTSSEEEEEEECSSBSSSSSBSCEEEEEEEETTCCEEEEECS-SCEEEEEEEESCEEEEEECTT--SCEEEEEESSCTT
T ss_pred CCCCceEEEeecCCCCCCCCCccceEEEEEECCCCCCeeEEcC-CCEEEEEEcCCCEEEEEEcCC--CCEEEEEeCCCcc
Confidence 4677878776654311 11122346677778999988888875 69999999998 588887665 4434444 56
Q ss_pred CCcE--EEECCCCeEEEEeCCCCCEEEEEEEcCCCCCceecccccccCCCCCCHHHHHHhcCCCHHHHHHH
Q 048039 131 KGDV--FVFPMGLLHYQRNVGKVNAVAIAALNSQNPGTSSIAPALFTSKPVLNDEIISKTFLFDKKNVAIL 199 (204)
Q Consensus 131 ~Gd~--~~~p~g~~H~~~N~g~~~a~~i~~~~s~~pg~~~~~~~~f~~~p~~~~~vl~~~f~~~~~~v~~l 199 (204)
+|+. +++|+|..+..++...+.+.+-++. .||+..-.-.+ .+.+-|.+.|.--++.|++|
T Consensus 103 ~Ge~pQ~vVP~G~wqaa~~~~g~~~LV~C~V---aPGF~f~dfel------~~~~~L~~~~P~~~~~I~~l 164 (170)
T 1yud_A 103 AGERPQFLVPKGCIFGSAMNQDGFSLVGCMV---SPGFTFDDFEL------FSQEALLAMYPQHKAVVQKL 164 (170)
T ss_dssp TTEESCEEECTTCEEEEEESSSSEEEEEEEE---SSCCCGGGCCB------CBHHHHHHSCCTTHHHHTTS
T ss_pred cCceeEEEECCCCEEEEEECCCCcEEEEEEE---CCCccCCceEE------cCHHHHHhHCchhHHHHHHh
Confidence 7898 9999999999998732444444432 45553332222 34566666677667777665
No 128
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=97.26 E-value=0.0016 Score=54.22 Aligned_cols=73 Identities=16% Similarity=0.247 Sum_probs=57.2
Q ss_pred EEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECC--CCeEEEEeCCC-CCEEEEE
Q 048039 81 MVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPM--GLLHYQRNVGK-VNAVAIA 157 (204)
Q Consensus 81 ~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~--g~~H~~~N~g~-~~a~~i~ 157 (204)
+...++.||...++|.|.+-+.+-||++|+++.. |+. + ....+++||+-+..+ |+.|.-.|..+ +++.++-
T Consensus 66 ln~~~~~pg~gf~~HPHrg~EtvTyvl~G~~~H~--DS~--G--n~~~i~~GdvQ~MtAG~GI~HsE~n~~~~~~l~~lQ 139 (256)
T 2vec_A 66 LNQEVLAPGAAFQPRTYPKVDILNVILDGEAEYR--DSE--G--NHVQASAGEALLLSTQPGVSYSEHNLSKDKPLTRMQ 139 (256)
T ss_dssp EEEEEECTTCEEEEECCSSEEEEEEEEESEEEEE--ETT--S--CEEEEETTEEEEECCCTTCCEEEEECCSSSCEEEEE
T ss_pred ccccccCCCCccCCcCCCCcEEEEEEEeeEEEEE--eCC--C--CEEEECCCeEEEEECCCCeEEEEEECCCCceEEEEE
Confidence 4556789998899999998455789999998875 554 2 478999999999955 57999999754 6777666
Q ss_pred EE
Q 048039 158 AL 159 (204)
Q Consensus 158 ~~ 159 (204)
+.
T Consensus 140 lW 141 (256)
T 2vec_A 140 LW 141 (256)
T ss_dssp EE
T ss_pred EE
Confidence 55
No 129
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=97.22 E-value=0.0009 Score=54.52 Aligned_cols=78 Identities=14% Similarity=0.196 Sum_probs=58.2
Q ss_pred CCceEEEEeccccCCCCCceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEEC
Q 048039 59 MGSKATPVYVQQIPGLNTLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFP 138 (204)
Q Consensus 59 ~g~~~~~~~~~~~P~l~~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p 138 (204)
.|.++..+.... . -.+..++++||...++|.| +..|+ +||+|++.- + ...+.+|+.+..|
T Consensus 133 ~Gv~~~~L~~~~--~-----E~v~l~r~~~G~~~~~~~h-gG~Ei-lVL~G~~~d--------~---~~~~~~GsWlR~P 192 (223)
T 3o14_A 133 EGISTSLLHEDE--R-----ETVTHRKLEPGANLTSEAA-GGIEV-LVLDGDVTV--------N---DEVLGRNAWLRLP 192 (223)
T ss_dssp TTEEEEEEEECS--S-----CEEEEEEECTTCEEEECCS-SCEEE-EEEEEEEEE--------T---TEEECTTEEEEEC
T ss_pred CCeEEEEEecCC--C-----cEEEEEEECCCCccCCCCC-CcEEE-EEEEeEEEE--------C---CceECCCeEEEeC
Confidence 455555554332 2 2356688899999999999 66886 999999762 2 3689999999999
Q ss_pred CCCeEEEEeCCCCCEEEEE
Q 048039 139 MGLLHYQRNVGKVNAVAIA 157 (204)
Q Consensus 139 ~g~~H~~~N~g~~~a~~i~ 157 (204)
.|..|.... |++.|.++.
T Consensus 193 ~gs~h~~~a-g~~g~~i~~ 210 (223)
T 3o14_A 193 EGEALSATA-GARGAKIWM 210 (223)
T ss_dssp TTCCEEEEE-EEEEEEEEE
T ss_pred CCCccCcEE-CCCCeEEEE
Confidence 999999877 566666543
No 130
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=97.05 E-value=0.0029 Score=51.82 Aligned_cols=80 Identities=19% Similarity=0.131 Sum_probs=57.0
Q ss_pred eEEEEEEEECCCCCCCCccCCCCcEEEEEEeC-cE--EEEEEecCC-----------CCce------eEEEeCCCcEEEE
Q 048039 78 GLSMVRVDFAPDGLNPPHTHPRASEIMTLLEG-TL--EVGFIGTAP-----------DYRH------FSKILNKGDVFVF 137 (204)
Q Consensus 78 g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G-~~--~~~~~~~~~-----------~~~~------~~~~L~~Gd~~~~ 137 (204)
...-..+.+.+|...|.|.|+.-.|-+++.-| ++ ++...++.+ ++.. ....|+||+.+.+
T Consensus 105 ~YaeK~Li~~~gQ~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESiTl 184 (246)
T 3kmh_A 105 CYAEKIMHVRDAQVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESICL 184 (246)
T ss_dssp CEEEEEEEECBTCEEEEEEESSCCEEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEEEE
T ss_pred cceeeEeeccCCCCCCcccCCCccccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeEec
Confidence 34556678899999999999888999999998 44 443332221 1111 2458999999999
Q ss_pred CCCCeEEEEeCCC-CCEEEEE
Q 048039 138 PMGLLHYQRNVGK-VNAVAIA 157 (204)
Q Consensus 138 p~g~~H~~~N~g~-~~a~~i~ 157 (204)
++|+.|+++..+. .++.+-.
T Consensus 185 ~Pg~~H~F~ae~g~G~vligE 205 (246)
T 3kmh_A 185 PPGLYHSFWAEAGFGDVLVGE 205 (246)
T ss_dssp CTTEEEEEEECTTSCCEEEEE
T ss_pred CCCCEEEEEecCCCccEEEEE
Confidence 9999999987654 2444433
No 131
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=96.94 E-value=0.0054 Score=50.46 Aligned_cols=74 Identities=15% Similarity=0.094 Sum_probs=57.4
Q ss_pred EEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEE--CCCCeEEEEeCC-CCCEEEEE
Q 048039 81 MVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVF--PMGLLHYQRNVG-KVNAVAIA 157 (204)
Q Consensus 81 ~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~--p~g~~H~~~N~g-~~~a~~i~ 157 (204)
+....+.||...++|-|.+-+.+-||++|+++.. |+. + -...+++||+-+. -.|+.|.-.|.. .+++.++-
T Consensus 43 ~n~d~i~pg~gf~~HPHrg~EtvTyvl~G~~~H~--DS~--G--n~~~i~~GdvQ~MtAG~GI~HsE~~~~~~~~l~~lQ 116 (242)
T 1tq5_A 43 INDDVIEAGQGFGTHPHKDMEILTYVLEGTVEHQ--DSM--G--NKEQVPAGEFQIMSAGTGIRHSEYNPSSTERLHLYQ 116 (242)
T ss_dssp EEEEEECTTCEEEEEEECSCEEEEEEEESEEEEE--ESS--S--CEEEEETTCEEEEECTTCEEEEEECCCSSCCEEEEE
T ss_pred eccceeCCCCcCCCcCCCCcEEEEEEEEeEEEEE--eCC--C--CcEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEE
Confidence 4456788998889999998666899999998875 554 2 3789999999999 556899999965 36776665
Q ss_pred EEc
Q 048039 158 ALN 160 (204)
Q Consensus 158 ~~~ 160 (204)
+.-
T Consensus 117 lWv 119 (242)
T 1tq5_A 117 IWI 119 (242)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 132
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=96.66 E-value=0.02 Score=49.31 Aligned_cols=74 Identities=18% Similarity=0.133 Sum_probs=55.1
Q ss_pred EEECC-CCCCCCccCCCCcEEEEEEeCcEEEEEE-ecCC-------------------------------CCceeEEEeC
Q 048039 84 VDFAP-DGLNPPHTHPRASEIMTLLEGTLEVGFI-GTAP-------------------------------DYRHFSKILN 130 (204)
Q Consensus 84 ~~i~p-g~~~ppH~H~~a~E~~yVl~G~~~~~~~-~~~~-------------------------------~~~~~~~~L~ 130 (204)
+-+.| |+..++|+.+. .-++..+.|+=++.+. .+.. .......+|+
T Consensus 145 ~~~gp~g~~~~~H~D~~-dnfl~Qv~G~Krw~L~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~L~ 223 (342)
T 1vrb_A 145 VYAAKNGGGFKAHFDAY-TNLIFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLT 223 (342)
T ss_dssp EEEECSSCCCCSEECSS-EEEEEEEESCEEEEEECCSSCSSCSSCEECC----CCHHHHHHCCSCCCCTTCCSSEEEEEC
T ss_pred EEEeCCCCCCCCeECCh-hcEEEEEEEEEEEEEecCCccccccCcccccccccccccccccchhhccccccCCceEEEEC
Confidence 44555 77899999876 7888899999888776 3210 0112578999
Q ss_pred CCcEEEECCCCeEEEEeCCCCCEEEEEE
Q 048039 131 KGDVFVFPMGLLHYQRNVGKVNAVAIAA 158 (204)
Q Consensus 131 ~Gd~~~~p~g~~H~~~N~g~~~a~~i~~ 158 (204)
+||++++|+|..|+..+.+++++.-+++
T Consensus 224 pGD~LyiP~gwwH~v~s~~~~~slsvsi 251 (342)
T 1vrb_A 224 PGTMLYLPRGLWHSTKSDQATLALNITF 251 (342)
T ss_dssp TTCEEEECTTCEEEEECSSCEEEEEEEE
T ss_pred CCcEEEeCCCccEEEEECCCCceEEEEE
Confidence 9999999999999999976555555554
No 133
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=96.44 E-value=0.028 Score=44.40 Aligned_cols=73 Identities=11% Similarity=0.077 Sum_probs=53.3
Q ss_pred CCCCCCCCccC--CCCcEEEEEEeCcEEEEEEecC-CC---CceeEEEeCC--CcEEEECCCCeEEEEeCCCCCEEEEEE
Q 048039 87 APDGLNPPHTH--PRASEIMTLLEGTLEVGFIGTA-PD---YRHFSKILNK--GDVFVFPMGLLHYQRNVGKVNAVAIAA 158 (204)
Q Consensus 87 ~pg~~~ppH~H--~~a~E~~yVl~G~~~~~~~~~~-~~---~~~~~~~L~~--Gd~~~~p~g~~H~~~N~g~~~a~~i~~ 158 (204)
.+|....+|+| ....++++|++|++..-++|-. ++ ++.....|.+ +..++||+|..|.+.+.++. ++++..
T Consensus 56 ~~GvlRGlH~q~p~~q~klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y~ 134 (185)
T 1ep0_A 56 VRGVLRGLHFQREKPQGKLVRVIRGEIFDVAVDLRKNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSDE-CIVNYK 134 (185)
T ss_dssp ETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEEE
T ss_pred cCCeEecceecCCccccEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEEEe
Confidence 37778899999 6669999999999754444422 11 2456777765 58999999999999999876 555444
Q ss_pred Ec
Q 048039 159 LN 160 (204)
Q Consensus 159 ~~ 160 (204)
.+
T Consensus 135 ~s 136 (185)
T 1ep0_A 135 CT 136 (185)
T ss_dssp ES
T ss_pred cC
Confidence 33
No 134
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=96.39 E-value=0.024 Score=42.05 Aligned_cols=72 Identities=18% Similarity=0.252 Sum_probs=54.1
Q ss_pred CCCCCCCCc----cCCCCcEEEEEEeCcEEEEEEecCCCC-c-eeEEEeCCCcEEEECCCCeEEEEeCCCCCEEE-EEEE
Q 048039 87 APDGLNPPH----THPRASEIMTLLEGTLEVGFIGTAPDY-R-HFSKILNKGDVFVFPMGLLHYQRNVGKVNAVA-IAAL 159 (204)
Q Consensus 87 ~pg~~~ppH----~H~~a~E~~yVl~G~~~~~~~~~~~~~-~-~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~-i~~~ 159 (204)
.|++..+.| +|.+..+.+.|++|++++..-+..+ + . .+.....+|+..++|++..|.+.-.++ ++.+ +.++
T Consensus 22 lP~~ll~~H~~~~Tk~Gtwg~l~VL~G~L~f~~~~e~g-~~~~~~~~l~~~~~~~~i~Pq~wH~Ve~lsd-d~~f~leFy 99 (127)
T 3bb6_A 22 APAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEH-SAEPDQVILIEAGQFAVFPPEKWHNIEAMTD-DTYFNIDFF 99 (127)
T ss_dssp SCGGGGSSBCCTTCCTTEEEEEEEEESEEEEEEESSTT-CSSCSEEEEEEBTBEEECCSSCEEEEEESST-TCEEEEEEE
T ss_pred ChHHHHhhccccCCCCCEEEEEEEEEeEEEEEEECCCC-CcceeEEEEeCCCCceEECCCCcEEEEEcCC-CEEEEEEEE
Confidence 466677889 4898889999999999998644432 2 1 256678999999999999999997655 5555 4444
Q ss_pred c
Q 048039 160 N 160 (204)
Q Consensus 160 ~ 160 (204)
.
T Consensus 100 c 100 (127)
T 3bb6_A 100 V 100 (127)
T ss_dssp E
T ss_pred e
Confidence 3
No 135
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=96.34 E-value=0.034 Score=43.85 Aligned_cols=73 Identities=12% Similarity=0.033 Sum_probs=53.1
Q ss_pred CCCCCCCCccC--CCCcEEEEEEeCcEEEEEEecC-CC---CceeEEEeCC--CcEEEECCCCeEEEEeCCCCCEEEEEE
Q 048039 87 APDGLNPPHTH--PRASEIMTLLEGTLEVGFIGTA-PD---YRHFSKILNK--GDVFVFPMGLLHYQRNVGKVNAVAIAA 158 (204)
Q Consensus 87 ~pg~~~ppH~H--~~a~E~~yVl~G~~~~~~~~~~-~~---~~~~~~~L~~--Gd~~~~p~g~~H~~~N~g~~~a~~i~~ 158 (204)
.+|....+|+| ....++++|++|++..-++|-. ++ ++.....|.+ +..++||+|..|.+.+.++. ++++..
T Consensus 57 ~~GvlRG~H~q~p~~q~Klv~vv~G~v~dV~vD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y~ 135 (184)
T 2ixk_A 57 ARGVLRGLHYQIRQAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEY-AEFLYK 135 (184)
T ss_dssp ETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEEE
T ss_pred CCCceeeEEeCCCCCcCEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEeCCCcCCEEEeCCCeEEEEEEcCCC-EEEEEe
Confidence 47888899999 5668999999999754444422 11 2446777765 58999999999999999876 555444
Q ss_pred Ec
Q 048039 159 LN 160 (204)
Q Consensus 159 ~~ 160 (204)
.+
T Consensus 136 ~s 137 (184)
T 2ixk_A 136 TT 137 (184)
T ss_dssp ES
T ss_pred CC
Confidence 33
No 136
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=96.26 E-value=0.012 Score=46.74 Aligned_cols=68 Identities=22% Similarity=0.473 Sum_probs=50.0
Q ss_pred EEEEECCC-CCCCCccCCCCcEEEEEEeCcEEEEEEecCC-----------------------C---------CceeEEE
Q 048039 82 VRVDFAPD-GLNPPHTHPRASEIMTLLEGTLEVGFIGTAP-----------------------D---------YRHFSKI 128 (204)
Q Consensus 82 ~~~~i~pg-~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~-----------------------~---------~~~~~~~ 128 (204)
..+-+.++ +..++|..+. .-++.+++|+=++.+..+.. + .+..+.+
T Consensus 126 ~~~wiG~~gs~t~~H~D~~-~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~ 204 (235)
T 4gjz_A 126 INAWFGPQGTISPLHQDPQ-QNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCI 204 (235)
T ss_dssp EEEEEECTTCEEEEECCSS-EEEEEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGCCCEEEE
T ss_pred eEEEEeCCCCCceeeeccc-cceEEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCCCcEEEE
Confidence 34556554 4567787765 77888999999888865420 0 0124679
Q ss_pred eCCCcEEEECCCCeEEEEeCCC
Q 048039 129 LNKGDVFVFPMGLLHYQRNVGK 150 (204)
Q Consensus 129 L~~Gd~~~~p~g~~H~~~N~g~ 150 (204)
|+|||++++|+|..|...|.+.
T Consensus 205 l~pGD~LyiP~gW~H~V~~l~~ 226 (235)
T 4gjz_A 205 LSPGEILFIPVKYWHYVRALDL 226 (235)
T ss_dssp ECTTCEEEECTTCEEEEEESSS
T ss_pred ECCCCEEEeCCCCcEEEEECCC
Confidence 9999999999999999999753
No 137
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=96.23 E-value=0.049 Score=42.87 Aligned_cols=71 Identities=11% Similarity=0.045 Sum_probs=51.8
Q ss_pred CCCCCCCCccCC---CCcEEEEEEeCcEEEEEEecCCC----CceeEEEeCC--CcEEEECCCCeEEEEeCCCCCEEEEE
Q 048039 87 APDGLNPPHTHP---RASEIMTLLEGTLEVGFIGTAPD----YRHFSKILNK--GDVFVFPMGLLHYQRNVGKVNAVAIA 157 (204)
Q Consensus 87 ~pg~~~ppH~H~---~a~E~~yVl~G~~~~~~~~~~~~----~~~~~~~L~~--Gd~~~~p~g~~H~~~N~g~~~a~~i~ 157 (204)
.+|....+|+|. ...++++|++|++..-++|-..+ ++.....|.+ +..++||+|..|.+.+.++. ++++.
T Consensus 55 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y 133 (183)
T 1dzr_A 55 KKNVLRGLHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEY-AEFLY 133 (183)
T ss_dssp ETTBEEEEEEECGGGCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEE
T ss_pred CCCeeeeeEccCCCCCCcEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEEE
Confidence 378788999995 56899999999975444442211 2346777765 58999999999999998776 44443
Q ss_pred E
Q 048039 158 A 158 (204)
Q Consensus 158 ~ 158 (204)
.
T Consensus 134 ~ 134 (183)
T 1dzr_A 134 K 134 (183)
T ss_dssp E
T ss_pred E
Confidence 3
No 138
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=96.16 E-value=0.033 Score=44.43 Aligned_cols=72 Identities=10% Similarity=0.204 Sum_probs=54.0
Q ss_pred CCCCCCCCccCCCCcEEEEEEe-CcEEEEEEecCCC---CceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEEEEc
Q 048039 87 APDGLNPPHTHPRASEIMTLLE-GTLEVGFIGTAPD---YRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIAALN 160 (204)
Q Consensus 87 ~pg~~~ppH~H~~a~E~~yVl~-G~~~~~~~~~~~~---~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~~~~ 160 (204)
.+|....+|.|.. .++++|++ |++..-++|-.++ ++.....|..+..++||+|..|.+.+.++. ++++...+
T Consensus 68 ~~GvlRGlH~h~q-~Klv~~~~~G~v~dV~VDlR~SpTfg~~~~v~Ls~~~~L~IP~G~aHgf~~lsd~-a~~~y~~s 143 (197)
T 1nxm_A 68 RKNVLRGLHAEPW-DKYISVADGGKVLGTWVDLREGETFGNTYQTVIDASKSIFVPRGVANGFQVLSDF-VAYSYLVN 143 (197)
T ss_dssp ETTBEEEEEECSS-CEEEEECSSCCEEEEEEECBSSTTTTCEEEEEECTTEEEEECTTEEEEEEECSSE-EEEEEEES
T ss_pred CCCCcceeeeccc-ceEEEEcCCCEEEEEEEECCCCCCCCeEEEEEeCCCcEEEeCCCeEEEEEeccCC-eEEEEECC
Confidence 5777889999964 89999999 9964444442111 345788999999999999999999998765 55544433
No 139
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=96.11 E-value=0.044 Score=43.62 Aligned_cols=71 Identities=13% Similarity=0.072 Sum_probs=51.8
Q ss_pred ECCCCCCCCccCCC---CcEEEEEEeCcEEEEEEecCCC----CceeEEEeCC--CcEEEECCCCeEEEEeCCCCCEEEE
Q 048039 86 FAPDGLNPPHTHPR---ASEIMTLLEGTLEVGFIGTAPD----YRHFSKILNK--GDVFVFPMGLLHYQRNVGKVNAVAI 156 (204)
Q Consensus 86 i~pg~~~ppH~H~~---a~E~~yVl~G~~~~~~~~~~~~----~~~~~~~L~~--Gd~~~~p~g~~H~~~N~g~~~a~~i 156 (204)
-.+|...-+|+|.. ..++++|++|++..-++|-..+ ++.....|.+ +..++||+|..|.+.+.++. +.++
T Consensus 72 s~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~en~~~L~IP~G~aHgf~~lsd~-a~~l 150 (196)
T 1wlt_A 72 SRKGVVRGLHYQRTPKEQGKIIFVPKGRILDVAVDVRKSSPTFGKYVKAELNEENHYMLWIPPGFAHGFQALEDS-IVIY 150 (196)
T ss_dssp ECTTBEEEEEEECTTSCCEEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEESSSE-EEEE
T ss_pred CCCCcceeEEccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEE
Confidence 35777788999964 5899999999995544442210 2346778865 68999999999999998764 4443
Q ss_pred E
Q 048039 157 A 157 (204)
Q Consensus 157 ~ 157 (204)
.
T Consensus 151 y 151 (196)
T 1wlt_A 151 F 151 (196)
T ss_dssp E
T ss_pred E
Confidence 3
No 140
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=95.91 E-value=0.044 Score=43.93 Aligned_cols=69 Identities=10% Similarity=0.176 Sum_probs=51.8
Q ss_pred CCCCCCCCccCC---CCcEEEEEEeCcEEEEEEecC-CC---CceeEEEeCC--CcEEEECCCCeEEEEeCCCCCEEEE
Q 048039 87 APDGLNPPHTHP---RASEIMTLLEGTLEVGFIGTA-PD---YRHFSKILNK--GDVFVFPMGLLHYQRNVGKVNAVAI 156 (204)
Q Consensus 87 ~pg~~~ppH~H~---~a~E~~yVl~G~~~~~~~~~~-~~---~~~~~~~L~~--Gd~~~~p~g~~H~~~N~g~~~a~~i 156 (204)
.+|....+|+|. ...++++|++|++..-++|-. ++ ++.....|.+ +..++||+|..|.+.+.++. +.++
T Consensus 78 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~DV~VDlR~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHGF~~Lsd~-a~~~ 155 (205)
T 3ryk_A 78 EAGTIRGLHFQKNPKAQTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPH-TIVM 155 (205)
T ss_dssp STTBEEEEEEECTTSCCCEEEEEEESEEEEEEEECCTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSS-EEEE
T ss_pred CCCcEeEeEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCceEEEEEcCCC-EEEE
Confidence 578888999995 358999999999655555521 11 3446778865 78999999999999999865 4444
No 141
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=95.83 E-value=0.088 Score=42.15 Aligned_cols=70 Identities=11% Similarity=0.019 Sum_probs=51.5
Q ss_pred CCCCCCCCccCCC---CcEEEEEEeCcEEEEEEecCCC----CceeEEEeCC--CcEEEECCCCeEEEEeCCCCCEEEEE
Q 048039 87 APDGLNPPHTHPR---ASEIMTLLEGTLEVGFIGTAPD----YRHFSKILNK--GDVFVFPMGLLHYQRNVGKVNAVAIA 157 (204)
Q Consensus 87 ~pg~~~ppH~H~~---a~E~~yVl~G~~~~~~~~~~~~----~~~~~~~L~~--Gd~~~~p~g~~H~~~N~g~~~a~~i~ 157 (204)
.+|...-+|+|.. ..++++|++|++..-++|-..+ ++.....|.+ +..++||+|..|.+.+.++. ++++.
T Consensus 55 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y 133 (205)
T 1oi6_A 55 KRGVVRGIHYTVTPPGTAKYVYCARGKAMDIVIDIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALEDD-TVMSY 133 (205)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESCEEEEEECCCBTCTTTTCEEEEEECSSSCCEEEECTTCEEEEEECSTT-EEEEE
T ss_pred CCCeEeeeeccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEccCC-eEEEE
Confidence 5777788999953 5899999999975545542210 2356788876 47999999999999999876 44443
No 142
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=95.78 E-value=0.043 Score=47.26 Aligned_cols=76 Identities=13% Similarity=0.225 Sum_probs=55.7
Q ss_pred EEEC-CCCCCCCccCCCCcEEEEEEeCcEEEEEEecCC------------------------C---------CceeEEEe
Q 048039 84 VDFA-PDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAP------------------------D---------YRHFSKIL 129 (204)
Q Consensus 84 ~~i~-pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~------------------------~---------~~~~~~~L 129 (204)
+.+. +|...++|+.+. .-+..+++|+=++.+..+.. + .+..+.+|
T Consensus 187 l~iG~~gs~t~~H~D~~-~n~~~qv~G~K~~~L~pP~~~~~ly~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l 265 (349)
T 3d8c_A 187 LLIGMEGNVTPAHYGEQ-QNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVV 265 (349)
T ss_dssp EEEECTTCEEEEECCSE-EEEEEEEESCEEEEEECGGGHHHHCBBCTTSTTBTBBCSCTTSCCTTTCGGGGGCCEEEEEE
T ss_pred EEEECCCCCccceECCh-hcEEEEEeceEEEEEeCcchhhhhccccccCCCCCcccccCCCcchhhCcccccCCcEEEEE
Confidence 5565 556779999876 78888999998887754320 0 03468999
Q ss_pred CCCcEEEECCCCeEEEEeCCC-CCEEEEEEEc
Q 048039 130 NKGDVFVFPMGLLHYQRNVGK-VNAVAIAALN 160 (204)
Q Consensus 130 ~~Gd~~~~p~g~~H~~~N~g~-~~a~~i~~~~ 160 (204)
++||++++|+|..|...|.++ .....+....
T Consensus 266 ~pGD~LyiP~gWwH~V~~l~d~~~sisvn~w~ 297 (349)
T 3d8c_A 266 GPGDVLYIPMYWWHHIESLLNGGITITVNFWY 297 (349)
T ss_dssp CTTCEEEECTTCEEEEEECTTSCCEEEEEEEE
T ss_pred CCCCEEEECCCCcEEEEEcCCCCcEEEEEEEc
Confidence 999999999999999999863 4455554443
No 143
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=95.68 E-value=0.011 Score=49.88 Aligned_cols=70 Identities=13% Similarity=0.194 Sum_probs=47.7
Q ss_pred EEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCC-------CCceeEEEeCCCcEEEECCCCeEEEEeCCCC
Q 048039 79 LSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAP-------DYRHFSKILNKGDVFVFPMGLLHYQRNVGKV 151 (204)
Q Consensus 79 ~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~-------~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~ 151 (204)
+..+|+.+.||+.+.+|.=+ .|+....+|.+++.+.-... ++ +.+.+++|+++++....+|+..|.|++
T Consensus 91 l~~vRlrL~PG~~I~~HrD~--~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg--~~~~m~~GE~w~~d~~~~H~v~N~g~~ 166 (290)
T 1e5r_A 91 LQMARSRNLKNAIVIPHRDF--VELDREVDRYFRTFMVLEDSPLAFHSNED--TVIHMRPGEIWFLDAATVHSAVNFSEI 166 (290)
T ss_dssp EEEEEEEEEESEEEEEECCC----------CBCCEEEECSCCTTEEEEETT--EEECCCTTEEEECCTTSCEEEEESSSS
T ss_pred hheEEEEeCCCCEeeCccCc--cccccccCCceEEEeeEecCCCcEEEECC--EEEecCCCCEEEEcCCCeeEEEcCCCC
Confidence 46788899999999988554 24443445665554432221 13 689999999999999999999999874
Q ss_pred C
Q 048039 152 N 152 (204)
Q Consensus 152 ~ 152 (204)
+
T Consensus 167 ~ 167 (290)
T 1e5r_A 167 S 167 (290)
T ss_dssp C
T ss_pred C
Confidence 4
No 144
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=95.67 E-value=0.14 Score=42.49 Aligned_cols=73 Identities=23% Similarity=0.281 Sum_probs=59.3
Q ss_pred eEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeE-EEEeCCCCCEEEE
Q 048039 78 GLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLH-YQRNVGKVNAVAI 156 (204)
Q Consensus 78 g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H-~~~N~g~~~a~~i 156 (204)
|-+-.++.++|+-..|+-.|..-.| +||++|++.++ ...|.+|.-.++|+|+.- .++-.|.+++.+|
T Consensus 90 GaSTl~V~fpp~~~~P~Gi~~ad~E-~fVL~G~i~~G-----------~~~l~~h~Y~f~PaGV~~~~~kv~~~~g~~iL 157 (303)
T 2qdr_A 90 GASTSRVVLPPKFEAPSGIFTADLE-IFVIKGAIQLG-----------EWQLNKHSYSFIPAGVRIGSWKVLGGEEAEIL 157 (303)
T ss_dssp SCEEEEEEECTTCEECCBEESSCEE-EEEEESEEEET-----------TEEECTTEEEEECTTCCBCCEEEETTSCEEEE
T ss_pred CcceEEEEecCCCCCCCcccccceE-EEEEEeEEEeC-----------CEEecCCceEEecCCCccCceeecCCCCcEEE
Confidence 5677889999999888877765577 99999999873 478999999999999855 4556689999999
Q ss_pred EEEcCC
Q 048039 157 AALNSQ 162 (204)
Q Consensus 157 ~~~~s~ 162 (204)
.+.+..
T Consensus 158 ~fe~g~ 163 (303)
T 2qdr_A 158 WMENGS 163 (303)
T ss_dssp EEECSS
T ss_pred EEecCC
Confidence 885433
No 145
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=95.51 E-value=0.058 Score=45.19 Aligned_cols=49 Identities=18% Similarity=0.062 Sum_probs=41.2
Q ss_pred cEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEEE
Q 048039 101 SEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIAA 158 (204)
Q Consensus 101 ~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~~ 158 (204)
+-++++++|+..+.++ + +++.|++||++.||++..|.+... +.+++|.+
T Consensus 227 d~wiWqLEGss~Vt~~-----~--q~~~L~~~DsLLIpa~~~y~~~r~--~gsv~L~I 275 (286)
T 2qnk_A 227 DVWLWQLEGSSVVTMG-----G--RRLSLAPDDSLLVLAGTSYAWERT--QGSVALSV 275 (286)
T ss_dssp CEEEEEEESCEEEEET-----T--EEEEECTTEEEEECTTCCEEEEEC--TTCEEEEE
T ss_pred cEEEEEEcCceEEEEC-----C--eEEeccCCCEEEecCCCeEEEEec--CCeEEEEE
Confidence 7899999999998885 4 699999999999999999998753 44566655
No 146
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=95.46 E-value=0.071 Score=45.59 Aligned_cols=74 Identities=18% Similarity=0.215 Sum_probs=53.5
Q ss_pred EEEEC-CCCCCCCccCCCCcEEEEEEeCcEEEEEEecCC-------------------C---------CceeEEEeCCCc
Q 048039 83 RVDFA-PDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAP-------------------D---------YRHFSKILNKGD 133 (204)
Q Consensus 83 ~~~i~-pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~-------------------~---------~~~~~~~L~~Gd 133 (204)
.+.+. +|+..++|+.+. .-++.++.|+=++.+..+.. + .+..+.+|++||
T Consensus 170 ~l~~g~~g~~~~~H~D~~-~n~~~qv~G~K~w~L~pP~~~~~ly~~~~~~~~~d~~~~d~~~~p~~~~~~~~~~~L~pGD 248 (338)
T 3al5_A 170 VFRISSPGLQLWTHYDVM-DNLLIQVTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYECSLEAGD 248 (338)
T ss_dssp EEEEECTTCEEEEECCSS-EEEEEECSSCEEEEEECGGGGGGGTEETTEESCCCSSSCCTTTCTTGGGCCEEEEEECTTC
T ss_pred eeEECCCCCCccceECCc-ccEEEEEEEEEEEEEECcccccccccCCCCcccccCCCcchhhCcccccCCCEEEEECCCC
Confidence 34454 455678898875 67888899998887764310 0 014689999999
Q ss_pred EEEECCCCeEEEEeCCCCCEEEEEEE
Q 048039 134 VFVFPMGLLHYQRNVGKVNAVAIAAL 159 (204)
Q Consensus 134 ~~~~p~g~~H~~~N~g~~~a~~i~~~ 159 (204)
++++|+|..|...|.+ ....+.+.
T Consensus 249 ~LyiP~gWwH~v~~l~--~sisvn~~ 272 (338)
T 3al5_A 249 VLFIPALWFHNVISEE--FGVGVNIF 272 (338)
T ss_dssp EEEECTTCEEEEEESS--CEEEEEEE
T ss_pred EEEECCCCeEEEeeCC--CEEEEEEE
Confidence 9999999999999984 45555543
No 147
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=95.39 E-value=0.17 Score=42.24 Aligned_cols=72 Identities=18% Similarity=0.232 Sum_probs=55.5
Q ss_pred EEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECC--CCeEEEEeCCCCCEEEEEE
Q 048039 81 MVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPM--GLLHYQRNVGKVNAVAIAA 158 (204)
Q Consensus 81 ~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~--g~~H~~~N~g~~~a~~i~~ 158 (204)
+.. ...++...++|-|.+-+-+-||++|++... |+. + -...+++||+=..-+ |+.|.-.|..++++..+-+
T Consensus 42 ld~-~~~~~~gf~~HPHrg~EtVTyvl~G~~~H~--DS~--G--n~~~i~~GdvQwMtAG~GI~HsE~~~~~~~~~~lQl 114 (277)
T 2p17_A 42 LME-DIFERGTFDVHPHRGIETVTYVISGELEHF--DSK--A--GHSTLGPGDVQWMTAGRGVVHKEDPASGSTVHSLQL 114 (277)
T ss_dssp EEE-EEECTTCCCCEEECSEEEEEEEEESCEEEE--ETT--T--EEEEECTTCEEEEECTTCEEEEEEECTTCCEEEEEE
T ss_pred Eec-CCCCCCCCCCCCCCCcEEEEEEEEeEEEEe--eCC--C--CceEECCCeEEEEeCCCCEEEEeecCCCCCEEEEEE
Confidence 344 667888899999998445789999998875 554 3 478999999888766 5799999987777776654
Q ss_pred E
Q 048039 159 L 159 (204)
Q Consensus 159 ~ 159 (204)
.
T Consensus 115 W 115 (277)
T 2p17_A 115 W 115 (277)
T ss_dssp E
T ss_pred E
Confidence 4
No 148
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=95.31 E-value=0.18 Score=45.41 Aligned_cols=78 Identities=21% Similarity=0.299 Sum_probs=55.3
Q ss_pred EEECCCC-C-CCCccCCCCcEEEEEEeCcEEEEEEecCC------------------CCceeEEEeCCCcEEEECCCCeE
Q 048039 84 VDFAPDG-L-NPPHTHPRASEIMTLLEGTLEVGFIGTAP------------------DYRHFSKILNKGDVFVFPMGLLH 143 (204)
Q Consensus 84 ~~i~pg~-~-~ppH~H~~a~E~~yVl~G~~~~~~~~~~~------------------~~~~~~~~L~~Gd~~~~p~g~~H 143 (204)
+-+.|++ . .++|+-+. .-++.-++|+=++.+..+.. .......+|++||++++|+|..|
T Consensus 168 ~Y~tp~Gs~g~~pH~D~~-DvFllQv~G~KrWrL~~P~~~~~~lp~~~~~~~~~~~~~~p~~e~~L~pGDvLYiP~g~~H 246 (489)
T 4diq_A 168 VYLTPPNSQGFAPHYDDI-EAFVLQLEGRKLWRVYRPRAPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLLYFPRGFIH 246 (489)
T ss_dssp EEEECSSBCCSCCBCCSS-EEEEEEEEECEEEEEECCSSGGGTTCSSCCCCCCGGGCCCCSEEEEECTTCEEEECTTCEE
T ss_pred EEecCCCcccccCccCCc-ceEEEEEeeEEEEEEeCCCCccccCCCcccccCCcccccCcceEEEECCCCEEEECCCCce
Confidence 4444554 3 58999876 78888999998888865321 01124799999999999999999
Q ss_pred EEEeCCCCCEEEEEEEcCC
Q 048039 144 YQRNVGKVNAVAIAALNSQ 162 (204)
Q Consensus 144 ~~~N~g~~~a~~i~~~~s~ 162 (204)
+..+.+++...-+.+-..+
T Consensus 247 ~~~s~~~~~SlhlTi~~~~ 265 (489)
T 4diq_A 247 QAECQDGVHSLHLTLSTYQ 265 (489)
T ss_dssp EEEBCSSCCEEEEEEEECT
T ss_pred EEEecCCCceEEEeecccC
Confidence 9999866555544443333
No 149
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=95.24 E-value=0.21 Score=40.47 Aligned_cols=70 Identities=14% Similarity=0.057 Sum_probs=51.0
Q ss_pred CCCCCCCCccCCC---CcEEEEEEeCcEEEEEEecCC----CCceeEEEeCC--CcEEEECCCCeEEEEeCCCCCEEEEE
Q 048039 87 APDGLNPPHTHPR---ASEIMTLLEGTLEVGFIGTAP----DYRHFSKILNK--GDVFVFPMGLLHYQRNVGKVNAVAIA 157 (204)
Q Consensus 87 ~pg~~~ppH~H~~---a~E~~yVl~G~~~~~~~~~~~----~~~~~~~~L~~--Gd~~~~p~g~~H~~~N~g~~~a~~i~ 157 (204)
.+|...-+|+|.. ..++++|++|++..-++|-.. -++.....|.+ +..++||+|..|.+.+.++. ++++.
T Consensus 74 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~-a~vly 152 (225)
T 1upi_A 74 SAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDN-STVMY 152 (225)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSSS-EEEEE
T ss_pred CCCeEeeeeccCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCcEEEEEecCCCCcEEEeCCCeeEEEEEcCCC-EEEEE
Confidence 5777788999953 589999999997544444211 02346777766 47999999999999999876 44443
No 150
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=95.23 E-value=0.15 Score=41.10 Aligned_cols=70 Identities=10% Similarity=-0.036 Sum_probs=50.7
Q ss_pred CCCCCCCCccCCC---CcEEEEEEeCcEEEEEEecCCC----CceeEEEeCC--CcEEEECCCCeEEEEeCCCCCEEEEE
Q 048039 87 APDGLNPPHTHPR---ASEIMTLLEGTLEVGFIGTAPD----YRHFSKILNK--GDVFVFPMGLLHYQRNVGKVNAVAIA 157 (204)
Q Consensus 87 ~pg~~~ppH~H~~---a~E~~yVl~G~~~~~~~~~~~~----~~~~~~~L~~--Gd~~~~p~g~~H~~~N~g~~~a~~i~ 157 (204)
.+|...-+|+|.. ..++++|++|++..-++|-..+ ++.....|.+ +..++||+|..|.+.+.++. ++++.
T Consensus 63 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~-a~~ly 141 (216)
T 2c0z_A 63 VRGVVRGIHFVDVPPGQAKYVTCVRGAVFDVVVDLRVGSPTYGCWEGTRLDDVSRRAVYLSEGIGHGFCAISDE-ATLCY 141 (216)
T ss_dssp ETTBEEEEEEECTTTCCCEEEEEEESEEEEEEEECCBTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEE
T ss_pred CCCcEEcCEecCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEcCCC-eEEEE
Confidence 4777888999964 5899999999975444442110 2346777766 47999999999999999876 44443
No 151
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=95.11 E-value=0.2 Score=39.96 Aligned_cols=69 Identities=9% Similarity=-0.044 Sum_probs=51.8
Q ss_pred CCCCCCCCccCC---CCcEEEEEEeCcEEEEEEecCC-C---CceeEEEeCC--CcEEEECCCCeEEEEeCCCCCEEEE
Q 048039 87 APDGLNPPHTHP---RASEIMTLLEGTLEVGFIGTAP-D---YRHFSKILNK--GDVFVFPMGLLHYQRNVGKVNAVAI 156 (204)
Q Consensus 87 ~pg~~~ppH~H~---~a~E~~yVl~G~~~~~~~~~~~-~---~~~~~~~L~~--Gd~~~~p~g~~H~~~N~g~~~a~~i 156 (204)
.+|.+..+|.|. ...++++|++|++.--++|--. + ++.....|.+ +..++||+|..|.+.+.++. +.++
T Consensus 52 ~~GvlRGlH~q~~p~~q~KlV~~~~G~v~DV~VDlR~~SpTfG~w~~v~Ls~en~~~l~IP~GfaHGF~~Lsd~-a~~~ 129 (201)
T 4hn1_A 52 HRGALRGINYTEIPPGQAKYSVCVRGAGLDVVVDVRIGSPTFGRWEIVPMDAERNTAVYLTAGLGRAFLSLTDD-ATLV 129 (201)
T ss_dssp CTTBEEEEEEECSSSCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSTT-EEEE
T ss_pred CCCceEEEEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCcceEEEeecCCC-eEEE
Confidence 577788899984 4699999999997776666221 0 3445777765 78999999999999998765 4443
No 152
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=95.09 E-value=0.21 Score=41.95 Aligned_cols=74 Identities=19% Similarity=0.214 Sum_probs=56.1
Q ss_pred EEEEEEECCCCCCCCccCCCCcEEEEEE-eCcEEEEEEecCCCCceeEEEeCCCcEEEECC--CCeEEEEeCCCCCEEEE
Q 048039 80 SMVRVDFAPDGLNPPHTHPRASEIMTLL-EGTLEVGFIGTAPDYRHFSKILNKGDVFVFPM--GLLHYQRNVGKVNAVAI 156 (204)
Q Consensus 80 s~~~~~i~pg~~~ppH~H~~a~E~~yVl-~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~--g~~H~~~N~g~~~a~~i 156 (204)
-+....+.|+...++|-|.+-+-+-||+ +|++... |+.| -...+++||+=..-+ |+.|.-.|..++++..+
T Consensus 41 ~ld~~~~~~~~Gf~~HPHrg~EtVTyvl~~G~~~H~--DS~G----n~~~i~~GdvQwMtAG~GI~HsE~~~~~~~~~~l 114 (290)
T 1j1l_A 41 LFDEFKGGRPGGFPDHPHRGFETVSYLLEGGSMAHE--DFCG----HTGKMNPGDLQWMTAGRGILHAEMPCSEEPAHGL 114 (290)
T ss_dssp EEEEEEECTTCBEEEEEEBSEEEEEEECSSSCEEEE--ETTS----CEEEECTTCEEEEECTTCEEEEEEECSSSCEEEE
T ss_pred EEEccccCCCCCCCCCCCCCeEEEEEECcceEEEEe--eCCC----CceEECCCcEEEEeCCCCEEEEeEcCCCCCEEEE
Confidence 3445677888778999998844478999 9999875 5542 378999999887765 57899999866777766
Q ss_pred EEE
Q 048039 157 AAL 159 (204)
Q Consensus 157 ~~~ 159 (204)
-+.
T Consensus 115 QlW 117 (290)
T 1j1l_A 115 QLW 117 (290)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 153
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=95.09 E-value=0.59 Score=41.73 Aligned_cols=105 Identities=10% Similarity=0.031 Sum_probs=63.4
Q ss_pred CCCcEEeccCCCC----CCCCCCCceEEEEeccccCCCCCceEEEEEEEECCCCC-CCCccCCCCcEEEEEEeCcEEEEE
Q 048039 41 ADDFYFTGLDKQG----NFSNPMGSKATPVYVQQIPGLNTLGLSMVRVDFAPDGL-NPPHTHPRASEIMTLLEGTLEVGF 115 (204)
Q Consensus 41 ~~df~~~~~~~~~----~~~~~~g~~~~~~~~~~~P~l~~~g~s~~~~~i~pg~~-~ppH~H~~a~E~~yVl~G~~~~~~ 115 (204)
+.-+.|+-+..+. ...-..| ..+.+ ...-+..+. |+.+....... .+ ...-....++|++++-+|++.+..
T Consensus 118 p~qLrw~p~~ip~~~~~~~Dfv~G-l~tl~-gngD~~~~~-G~aI~~y~~n~-sM~~~~f~NaDGD~Livpq~G~l~i~T 193 (471)
T 1eyb_A 118 PNQLRWKPFEIPKASQKKVDFVSG-LHTLC-GAGDIKSNN-GLAIHIFLCNT-SMENRCFYNSDGDFLIVPQKGNLLIYT 193 (471)
T ss_dssp CSCEEECSCCCCCTTTCCCCTTTT-EEEEE-EESCGGGTC-CEEEEEEEECS-CCCSEEEEESSEEEEEEEEESCEEEEE
T ss_pred ccccccCCCCCCccccCCCCcccc-hhhee-ccCCccccc-ceEEEEEeCCC-CcccceeecCCCCEEEEEEeCCEEEEE
Confidence 4456677655443 2212233 23333 334443322 44443322222 23 334455667999999999999986
Q ss_pred EecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEEE
Q 048039 116 IGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIAA 158 (204)
Q Consensus 116 ~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~~ 158 (204)
. .-...+++||.++||+|+.+++.-.+ +++.+.+
T Consensus 194 E-------fG~L~v~pgei~VIPRGi~frv~l~~--p~Rgyi~ 227 (471)
T 1eyb_A 194 E-------FGKMLVQPNEICVIQRGMRFSIDVFE--ETRGYIL 227 (471)
T ss_dssp T-------TEEEEECTTEEEEECTTCCEEEECSS--SEEEEEE
T ss_pred e-------cccEEeccCCEEEECCccEEEEeeCC--CceEEEE
Confidence 3 23788999999999999999997655 6655543
No 154
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=95.08 E-value=0.23 Score=44.20 Aligned_cols=65 Identities=25% Similarity=0.401 Sum_probs=48.3
Q ss_pred EEECCCC-CC-CCccCCCCcEEEEEEeCcEEEEEEecCC-----------C---CceeEEEeCCCcEEEECCCCeEEEEe
Q 048039 84 VDFAPDG-LN-PPHTHPRASEIMTLLEGTLEVGFIGTAP-----------D---YRHFSKILNKGDVFVFPMGLLHYQRN 147 (204)
Q Consensus 84 ~~i~pg~-~~-ppH~H~~a~E~~yVl~G~~~~~~~~~~~-----------~---~~~~~~~L~~Gd~~~~p~g~~H~~~N 147 (204)
+-+.|++ .. ++|+-.. .-++..+.|+=++.+..+.. + ......+|++||++|+|+|..|+..+
T Consensus 143 ~y~~~~g~~g~~~H~D~~-dvf~~Qv~G~Krw~l~~p~~pl~~~~s~d~~~~~~~~~~~~~L~pGD~LYiP~g~~H~~~s 221 (442)
T 2xdv_A 143 VYITPAGSQGLPPHYDDV-EVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIHQADT 221 (442)
T ss_dssp EEEECTTCBCSCSEECSS-EEEEEEEESCEEEEEECCSSTTCSSCEECCTTTSCSCSEEEEECTTCEEEECTTCEEEEEC
T ss_pred eEECCCCCCCccceECCc-ceEEEEEEeEEEEEEccCCCCccccCCCCchhhcCCcceEEEECCCcEEEECCCceEEEEe
Confidence 3444444 43 7999765 78888999998888765420 0 11257899999999999999999998
Q ss_pred CC
Q 048039 148 VG 149 (204)
Q Consensus 148 ~g 149 (204)
.+
T Consensus 222 ~~ 223 (442)
T 2xdv_A 222 PA 223 (442)
T ss_dssp CS
T ss_pred cC
Confidence 75
No 155
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=94.86 E-value=0.23 Score=41.40 Aligned_cols=82 Identities=18% Similarity=0.221 Sum_probs=53.8
Q ss_pred eEEEEEEEECCCCC---CCCccCCCC--c------EEEEE-EeC--cEEEEEEec-CCCCceeEEEeCCCcEEEECCCCe
Q 048039 78 GLSMVRVDFAPDGL---NPPHTHPRA--S------EIMTL-LEG--TLEVGFIGT-APDYRHFSKILNKGDVFVFPMGLL 142 (204)
Q Consensus 78 g~s~~~~~i~pg~~---~ppH~H~~a--~------E~~yV-l~G--~~~~~~~~~-~~~~~~~~~~L~~Gd~~~~p~g~~ 142 (204)
.+-+..+ +.||+. -|||.|++. . |+.|- +.. ..-+++.-+ +++. -+...++-||++.+|+|.
T Consensus 152 ~LlvgEv-~tpgG~WSSyPpHkHd~~~~~~e~~lEE~YYf~~~~~~gf~~q~vyt~d~~~-de~~~V~~~d~VlvP~Gy- 228 (270)
T 2qjv_A 152 SLLVVEV-YTNAGATSSWPAHXHDTAVEGQETYLEETYYHRFNPPQGFCLQRVYTDDRSL-DECMAVYNRDVVXVPXGY- 228 (270)
T ss_dssp SCEEEEE-EECTTCEESCSCEECEEEETTTEEECEEEEEEEEESTTCEEEEEEECTTSSS-EEEEEEETTCEEEESSSB-
T ss_pred eEEEEEE-EcCCCccccCCCcccccccCcccccceeEEEEECCCCCCEEEEEEeCCCCCC-ceEEEEECCCEEecCCCc-
Confidence 4556656 777774 599999863 3 88864 442 233444311 1111 268999999999999999
Q ss_pred EEEEeCCCCCEEEEEEEcCC
Q 048039 143 HYQRNVGKVNAVAIAALNSQ 162 (204)
Q Consensus 143 H~~~N~g~~~a~~i~~~~s~ 162 (204)
|-.........-+|+++..+
T Consensus 229 Hp~~a~pGy~~YylwvMaG~ 248 (270)
T 2qjv_A 229 HPVATIAGYDNYYLNVMAGP 248 (270)
T ss_dssp CCEEECTTCEEEEEEEEECS
T ss_pred CCCcCCCCcccEEEEEEECC
Confidence 98655433455688888764
No 156
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=94.55 E-value=0.15 Score=35.74 Aligned_cols=65 Identities=17% Similarity=0.110 Sum_probs=48.0
Q ss_pred EECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEEEE
Q 048039 85 DFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIAAL 159 (204)
Q Consensus 85 ~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~~~ 159 (204)
.+.||. .+....+.|+.-|++|++++.+.++ -+..++++||.|.+|++.--.++-. ++...++.+
T Consensus 29 Vm~pGe---ytF~T~~~E~M~vvsG~~~V~lpg~-----~ew~~~~aGesF~Vpans~F~l~v~--~~~~YlC~y 93 (94)
T 2oyz_A 29 VMLPGE---YTFGTQAPERMTVVKGALVVKRVGE-----ADWTTYSSGESFDVEGNSSFELQVK--DATAYLCEY 93 (94)
T ss_dssp EECSEE---EEEEESSCEEEEEEESEEEEEETTC-----SSCEEEETTCEEEECSSEEEEEEES--SCEEEEEEC
T ss_pred EEeceE---EEEcCCCeEEEEEEEeEEEEEcCCC-----CcCEEECCCCEEEECCCCEEEEEEc--ccEeEEEEc
Confidence 345554 2333346999999999999999643 2589999999999999998877654 555666543
No 157
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=94.46 E-value=0.13 Score=40.90 Aligned_cols=77 Identities=16% Similarity=0.154 Sum_probs=53.8
Q ss_pred EEEEEEECCCCCCCCccCCCCcE----EEEEEeC-cEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEE
Q 048039 80 SMVRVDFAPDGLNPPHTHPRASE----IMTLLEG-TLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAV 154 (204)
Q Consensus 80 s~~~~~i~pg~~~ppH~H~~a~E----~~yVl~G-~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~ 154 (204)
++....+.||+.+++|..+.... +..++-. ...+.++ + +.+..++|++++|.-...|...|.++++ +
T Consensus 103 ~a~fs~L~pG~~I~pH~g~~n~~lR~HL~L~~p~~~~~i~V~-----~--~~~~w~eGe~~~fDds~~Hev~N~~d~~-R 174 (197)
T 3rcq_A 103 QIKYSIMHPGTHVWPHTGPTNCRLRMHLGLVIPKEGCKIRCA-----N--ETKTWEEGKVLIFDDSFEHEVWQDASSF-R 174 (197)
T ss_dssp EEEEEEECTTEEEEEECCSCTTEEEEEEEEECCSSSEEEEET-----T--EEECCCBTCEEEECTTSCEEEEECSSSC-E
T ss_pred eEEEEEeCCCCCcCCeeCCCCCeEEEEEEEEeCCCCcEEEEC-----C--EEEEeeCCcEEEEcCCeEEEEEECCCCC-E
Confidence 45567889999999998865322 2333333 4555553 3 6899999999999999999999998775 3
Q ss_pred EEEEEcCCCC
Q 048039 155 AIAALNSQNP 164 (204)
Q Consensus 155 ~i~~~~s~~p 164 (204)
++.++.-..|
T Consensus 175 vvL~~D~~rP 184 (197)
T 3rcq_A 175 LIFIVDVWHP 184 (197)
T ss_dssp EEEEEEEECT
T ss_pred EEEEEeeeCC
Confidence 4334443333
No 158
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=94.08 E-value=0.83 Score=38.21 Aligned_cols=82 Identities=22% Similarity=0.286 Sum_probs=55.4
Q ss_pred eEEEEEEEECCCC---CCCCccCCCCcEEEEEEe----CcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCC
Q 048039 78 GLSMVRVDFAPDG---LNPPHTHPRASEIMTLLE----GTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGK 150 (204)
Q Consensus 78 g~s~~~~~i~pg~---~~ppH~H~~a~E~~yVl~----G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~ 150 (204)
.+-+....+.||+ .-|||.|.+..|..|--+ |. .+++..+. ++-+...++-||++.+|+..+|.. .|.
T Consensus 179 qllmg~evltpgg~WSSyPpHkHDrr~EeyyYF~l~~~gf-v~q~~g~p--~Etrhi~V~n~daVlvP~wh~h~~--~G~ 253 (282)
T 1xru_A 179 QLSMGLTELAPGNLWNTMPCHTHERRMEVYFYFNMDDDAC-VFHMMGQP--QETRHIVMHNEQAVISPSWSIHSG--VGT 253 (282)
T ss_dssp SCEEEEEEECTTCCEESCSEEECTTEEEEEEEESCCTTCC-EEEEEEET--TEEEEEEECSSEEEEECTTCEEEE--EES
T ss_pred hEEEEEEEEeCCCCcCCCCCccCCCCceEEEEEEeCCCCE-EEEEeCCC--CCeeEEEEECCCEEEeCCCCCCCC--CCc
Confidence 3556667788887 379999987677766544 33 33333322 222345679999999997677773 477
Q ss_pred CCEEEEEEEcCCCC
Q 048039 151 VNAVAIAALNSQNP 164 (204)
Q Consensus 151 ~~a~~i~~~~s~~p 164 (204)
+.-.+|+++..+|.
T Consensus 254 ~~Y~ylwvMAG~n~ 267 (282)
T 1xru_A 254 KAYTFIWGMVGENQ 267 (282)
T ss_dssp SCCEEEEEEEESCC
T ss_pred cceEEEEEEEcCCc
Confidence 77788888876653
No 159
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=93.66 E-value=0.29 Score=35.26 Aligned_cols=68 Identities=18% Similarity=0.194 Sum_probs=51.1
Q ss_pred EEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEEEE
Q 048039 84 VDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIAAL 159 (204)
Q Consensus 84 ~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~~~ 159 (204)
-.+.||. .|.+....+.|+.-|++|++++.+.++ -+..++++|+.|.+|++.--.++-. ++..+++.|
T Consensus 42 GVm~PGe-~~YtF~T~~~E~MevvsG~l~V~Lpg~-----~eW~~~~aGesF~VpanssF~lkv~--~~~~Y~C~y 109 (111)
T 3hqx_A 42 GVILPTE-QPLTFETHVPERMEIISGECRVKIADS-----TESELFRAGQSFYVPGNSLFKIETD--EVLDYVCHL 109 (111)
T ss_dssp EEECCCS-SCEEEECSSCEEEEEEESEEEEEETTC-----SSCEEEETTCEEEECTTCEEEEECS--SCEEEEEEE
T ss_pred EEEeccc-cceEEcCCCcEEEEEEEeEEEEEcCCc-----ccCEEeCCCCEEEECCCCcEEEEEC--cceeEEEEc
Confidence 3456763 223444557999999999999999743 2589999999999999998887753 566666654
No 160
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=92.34 E-value=0.23 Score=44.30 Aligned_cols=65 Identities=17% Similarity=0.105 Sum_probs=49.4
Q ss_pred CCCCCCCCccCCCC-cEEEEEEeCcEEEEEEecCC-----------------------CCceeEEEeCCCcEEEECCCCe
Q 048039 87 APDGLNPPHTHPRA-SEIMTLLEGTLEVGFIGTAP-----------------------DYRHFSKILNKGDVFVFPMGLL 142 (204)
Q Consensus 87 ~pg~~~ppH~H~~a-~E~~yVl~G~~~~~~~~~~~-----------------------~~~~~~~~L~~Gd~~~~p~g~~ 142 (204)
++|+..+.|..+.. .-+..+++|+=++.+..+.. ..+....++++||++++|.|..
T Consensus 204 p~gS~T~~H~D~~~ts~w~avi~GrK~w~L~PP~~~~~~~y~~~~~s~~q~~~~~p~~~~~~~~v~l~pGE~LfIPsGWw 283 (451)
T 2yu1_A 204 VRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNLELYENWLLSGSQGDIFLGDRVSDCQRIELKQGYTFVIPSGWI 283 (451)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEESCEEEEEECCCHHHHHHHHHHHHTTCCSSSCHHHHSSCCEEEEECTTCEEEECTTCE
T ss_pred cCCCCCCeEECCCCcchhhheecceEEEEEeCCCcccccccccccccccchhhhhccccccceEEEECCCcEEEeCCCce
Confidence 55667899998764 35678999998888765331 0124678999999999999999
Q ss_pred EEEEeCCCC
Q 048039 143 HYQRNVGKV 151 (204)
Q Consensus 143 H~~~N~g~~ 151 (204)
|...|..+.
T Consensus 284 H~V~nleds 292 (451)
T 2yu1_A 284 HAVYTPTDT 292 (451)
T ss_dssp EEEECSSCE
T ss_pred EEEecCCCe
Confidence 999997543
No 161
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=92.25 E-value=0.6 Score=39.16 Aligned_cols=82 Identities=23% Similarity=0.255 Sum_probs=46.3
Q ss_pred eEEEEEEEECCCCC---CCCccCCCCcEEEEEEe--C-cEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCC
Q 048039 78 GLSMVRVDFAPDGL---NPPHTHPRASEIMTLLE--G-TLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKV 151 (204)
Q Consensus 78 g~s~~~~~i~pg~~---~ppH~H~~a~E~~yVl~--G-~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~ 151 (204)
.+.+....+.||+. -|||.|.+..|..|--+ . ...+++..+- ++.+...++-||++++|++-.|. -.|..
T Consensus 179 qllmg~evltpGg~WSSyPpHkHDrr~E~yyYF~l~p~~~v~h~~g~p--dEtrh~~V~n~daVlvP~wgyHp--~~Gt~ 254 (289)
T 1ywk_A 179 QLQMGYTILEPGSAWNTMPCHTHERRMEAYVYFDMEEDTRIFHMMGKP--DETKHLVMSNEQAAISPSWSIHS--GVGTS 254 (289)
T ss_dssp SCEEEEEEECTTCCCCC--------CEEEEEEESCCTTCCEEEEESST--TSCEEEEECTTEEEEECTTSCCC--EEESS
T ss_pred eEEEEEEEEeCCCCcCCCCCccCCCCCeeEEEEEeCCCCeEEEECCCC--CceEEEEEECCCEEEeCCCcccC--CCCCc
Confidence 35566677888873 69999987677766433 1 1223333221 22234778999999999998886 24555
Q ss_pred CEEEEEEEcCCC
Q 048039 152 NAVAIAALNSQN 163 (204)
Q Consensus 152 ~a~~i~~~~s~~ 163 (204)
.-.+|+++..+|
T Consensus 255 ~Y~ylwvMAG~n 266 (289)
T 1ywk_A 255 NYSFIWAMCGEN 266 (289)
T ss_dssp CCEEEEEEECC-
T ss_pred CeEEEEEEEcCC
Confidence 666888887665
No 162
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=91.60 E-value=0.28 Score=44.16 Aligned_cols=64 Identities=14% Similarity=0.175 Sum_probs=48.5
Q ss_pred CCCCCCCCccCCCCc-EEEEEEeCcEEEEEEecCC-----------------------CCceeEEEeCCCcEEEECCCCe
Q 048039 87 APDGLNPPHTHPRAS-EIMTLLEGTLEVGFIGTAP-----------------------DYRHFSKILNKGDVFVFPMGLL 142 (204)
Q Consensus 87 ~pg~~~ppH~H~~a~-E~~yVl~G~~~~~~~~~~~-----------------------~~~~~~~~L~~Gd~~~~p~g~~ 142 (204)
..|+..+.|..+... -+..+++|+=++.+..+.. ..+....++++||++++|+|..
T Consensus 274 ~~gS~T~~H~D~~~t~~w~~vv~G~K~w~L~PPt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~pGe~lfIPsGWw 353 (488)
T 3kv5_D 274 VQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPTGWI 353 (488)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGSSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeEECCCCCceeeeccCeeEEEEEeCCcccccccccccccCCccchhhhcccccceEEEeeCCCCEEEeCCCce
Confidence 556678999987633 4568999998888875420 0123588999999999999999
Q ss_pred EEEEeCCC
Q 048039 143 HYQRNVGK 150 (204)
Q Consensus 143 H~~~N~g~ 150 (204)
|+..|..+
T Consensus 354 H~V~nled 361 (488)
T 3kv5_D 354 HAVLTSQD 361 (488)
T ss_dssp EEEEEEEE
T ss_pred EEeeCCCC
Confidence 99999743
No 163
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=91.50 E-value=0.6 Score=41.49 Aligned_cols=77 Identities=14% Similarity=0.135 Sum_probs=48.4
Q ss_pred eEEEEEEEEC--CCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCC---CCC
Q 048039 78 GLSMVRVDFA--PDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVG---KVN 152 (204)
Q Consensus 78 g~s~~~~~i~--pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g---~~~ 152 (204)
.+++.++++. ++.....-.+. ...+++|++|++++...+ ++.....|++||++++|++..-.+.+.+ .+.
T Consensus 356 eF~v~~~~~~~~~~~~~~~~~~~-~~~illv~~G~g~i~~~~----~~~~~~~l~~G~~~fvpa~~~~~i~g~~~~~~~~ 430 (440)
T 1pmi_A 356 EFSVLQTIFDKSKGGKQVIEGLN-GPSIVIATNGKGTIQITG----DDSTKQKIDTGYVFFVAPGSSIELTADSANQDQD 430 (440)
T ss_dssp SCEEEEEECCTTTCCEEEECCCS-SCEEEEEEESEEEEEETT----CGGGCEEEETTCEEEECTTCCEEEEECSSCCSSC
T ss_pred eEEEEEEEecCCCCceeEEecCC-CcEEEEEEeCeEEEEeCC----cccceEEeccCCEEEEeCCCcEEEEEecccCCCc
Confidence 4678888887 34221111233 488999999999987631 1000168999999999999544455541 344
Q ss_pred EEEEEEE
Q 048039 153 AVAIAAL 159 (204)
Q Consensus 153 a~~i~~~ 159 (204)
++++.++
T Consensus 431 ~~~~~a~ 437 (440)
T 1pmi_A 431 FTTYRAF 437 (440)
T ss_dssp CEEEEEE
T ss_pred EEEEEEE
Confidence 5555443
No 164
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=90.81 E-value=1.4 Score=32.09 Aligned_cols=50 Identities=12% Similarity=0.097 Sum_probs=37.4
Q ss_pred CCCcEEEEEEeCcEEEEEEecCCC-CceeEEEeCCCcEEEECCCCeEEEEe
Q 048039 98 PRASEIMTLLEGTLEVGFIGTAPD-YRHFSKILNKGDVFVFPMGLLHYQRN 147 (204)
Q Consensus 98 ~~a~E~~yVl~G~~~~~~~~~~~~-~~~~~~~L~~Gd~~~~p~g~~H~~~N 147 (204)
.+...-+-|++|++++..-+..++ .-.+...+.+|+..++++...|.+.-
T Consensus 36 ~GtWgkL~Vl~G~Lkf~~~~e~~~~~~~~~~~~~~~~~~~i~Pq~wHrVe~ 86 (119)
T 3dl3_A 36 VDVFGQICVMEGVVTYYGFANSEATEPEIKVVINAGQFATSPPQYWHRIEL 86 (119)
T ss_dssp TTEEEEEEEEESEEEEEEESSTTCCSCSEEEEEETTEEEEECTTCEEEEEE
T ss_pred CcEEEEEEEEEeEEEEEEEcCCCCCcccEEEEeCCCCCceeCCCceEEEEE
Confidence 344567899999999986443221 01256788999999999999999993
No 165
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=90.68 E-value=0.59 Score=37.32 Aligned_cols=79 Identities=15% Similarity=0.112 Sum_probs=46.9
Q ss_pred EEEEEEECCCCCCCCccCCCCc--EEEEEE----eCcEEEEEEecCC-----------C-----CceeEEEeCCCcEEEE
Q 048039 80 SMVRVDFAPDGLNPPHTHPRAS--EIMTLL----EGTLEVGFIGTAP-----------D-----YRHFSKILNKGDVFVF 137 (204)
Q Consensus 80 s~~~~~i~pg~~~ppH~H~~a~--E~~yVl----~G~~~~~~~~~~~-----------~-----~~~~~~~L~~Gd~~~~ 137 (204)
......+++|+...+|.|+++. =++|+- .|++.+. ++.. + .......-++|++++|
T Consensus 104 ~~W~~~~~~G~~~~~H~H~~~~lSgV~Yl~~p~~~G~L~f~--~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvlF 181 (216)
T 2rg4_A 104 DIWINILPEGGVHGSHIHPHSVISGTTYVAMPEGTSALKLE--DPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLW 181 (216)
T ss_dssp EEEEEEECTTCCEEEECCTTCSEEEEEEEECCSCSCCEEEE--CTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEEE
T ss_pred eEEEEEcCCCCcccCccCCCCeEEEEEEEECCCCCccEEEe--CCccccccccCcccccCcccCCCeeEecCCCCeEEEE
Confidence 3455677899999999997621 123332 2444443 3210 0 0112456699999999
Q ss_pred CCCCeEEEEeCCCCCEEEEEEEc
Q 048039 138 PMGLLHYQRNVGKVNAVAIAALN 160 (204)
Q Consensus 138 p~g~~H~~~N~g~~~a~~i~~~~ 160 (204)
|+.+.|...-...+.-++-.+|+
T Consensus 182 pS~l~H~V~p~~~~~~RiSIsFN 204 (216)
T 2rg4_A 182 ESWLRHEVPMNMAEEDRISVSFN 204 (216)
T ss_dssp ETTSCEEECCCCSSSCEEEEEEE
T ss_pred CCCCEEeccCCCCCCCEEEEEEE
Confidence 99999998643333334444444
No 166
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=90.67 E-value=0.62 Score=41.51 Aligned_cols=64 Identities=14% Similarity=0.166 Sum_probs=47.8
Q ss_pred CCCCCCCCccCCCCc-EEEEEEeCcEEEEEEecCC-----------------------CCceeEEEeCCCcEEEECCCCe
Q 048039 87 APDGLNPPHTHPRAS-EIMTLLEGTLEVGFIGTAP-----------------------DYRHFSKILNKGDVFVFPMGLL 142 (204)
Q Consensus 87 ~pg~~~ppH~H~~a~-E~~yVl~G~~~~~~~~~~~-----------------------~~~~~~~~L~~Gd~~~~p~g~~ 142 (204)
+.|+..+.|..+... -+..|++|+=++.+..+.. ..+....++++||++++|+|..
T Consensus 239 ~~gS~T~~HiD~~~ts~w~~vi~GrK~w~L~PPt~~nl~~~~~~~~s~~~~~~~~~~~~~~~~~v~l~pGetlfIPsGWw 318 (447)
T 3kv4_A 239 VRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTGWI 318 (447)
T ss_dssp CTTEEEEEECCGGGCEEEEEEEESEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGGSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeeECCCCCceeEEEeeeEEEEEEeCCCcccccchhhcccCcchhhhhccccccceEEEEECCCcEEecCCCCe
Confidence 455567889876533 4668999998887765431 0123588999999999999999
Q ss_pred EEEEeCCC
Q 048039 143 HYQRNVGK 150 (204)
Q Consensus 143 H~~~N~g~ 150 (204)
|+..|..+
T Consensus 319 H~V~nled 326 (447)
T 3kv4_A 319 HAVLTPVD 326 (447)
T ss_dssp EEEEESSC
T ss_pred EEEecCCC
Confidence 99999844
No 167
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=90.28 E-value=3.7 Score=34.27 Aligned_cols=78 Identities=8% Similarity=0.029 Sum_probs=50.9
Q ss_pred ceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEE
Q 048039 77 LGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAI 156 (204)
Q Consensus 77 ~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i 156 (204)
..+.+..+++++|+.......++..-++||++|++++. +......+.++.++++..|..-.+.+.+.++++++
T Consensus 167 ~~~~~~~~~l~~g~~~~~~l~~~~~~~lyv~~G~v~v~-------g~~~~~~~~~~~~~~l~~gd~~~i~~~a~~~a~~L 239 (290)
T 1j1l_A 167 TPTLYLDFKLDPGAKHSQPIPKGWTSFIYTISGDVYIG-------PDDAQQKIEPHHTAVLGEGDSVQVENKDPKRSHFV 239 (290)
T ss_dssp SCEEEEEEEECTTCEEEEECCTTCEEEEEEEESCEEES-------CTTSCEEECTTEEEEECSCSEEEEECCSSSCEEEE
T ss_pred CCcEEEEEEECCCCEEEeecCCCCEEEEEEEeCeEEEC-------CcccceeccCceEEEecCCCEEEEEEcCCCCcEEE
Confidence 45778889999998753322333367899999999873 11012456667777777676555665456678877
Q ss_pred EEEcC
Q 048039 157 AALNS 161 (204)
Q Consensus 157 ~~~~s 161 (204)
.+-..
T Consensus 240 Ll~G~ 244 (290)
T 1j1l_A 240 LIAGE 244 (290)
T ss_dssp EEEEC
T ss_pred EEEcc
Confidence 66443
No 168
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=90.24 E-value=0.61 Score=33.33 Aligned_cols=55 Identities=18% Similarity=0.145 Sum_probs=42.6
Q ss_pred EECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEe
Q 048039 85 DFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRN 147 (204)
Q Consensus 85 ~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N 147 (204)
.+.||. .+....+.|+.-|++|++++.+.++ -...++++|+.|.+|++.--.++-
T Consensus 42 Vm~PGe---Y~F~T~~~E~MevvsG~l~V~LpG~-----~eW~~~~aGesF~VpanssF~lkv 96 (106)
T 3eo6_A 42 LLHPGV---YTLSSEVAETIRVLSGMAYYHAEGA-----NDVQELHAGDSMVIPANQSYRLEV 96 (106)
T ss_dssp EECSEE---EEECCSSCEEEEEEEEEEEEECTTC-----SSCEEEETTCEEEECSSSCEEEEE
T ss_pred EEeeeE---EEecCCCcEEEEEEEeEEEEECCCC-----ccCEEECCCCEEEECCCCcEEEEE
Confidence 345653 3344457999999999999998642 258999999999999998777664
No 169
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=90.22 E-value=1.5 Score=35.67 Aligned_cols=75 Identities=5% Similarity=-0.031 Sum_probs=49.6
Q ss_pred ceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEE
Q 048039 77 LGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAI 156 (204)
Q Consensus 77 ~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i 156 (204)
+.+.+..+++++|+....-...+..-++||++|++++. + ..|.+||.+++..+..-.+.+ .++++++
T Consensus 158 ~~~~~~~~~l~~g~~~~~~~~~~~~~~~~v~~G~v~v~-------g----~~l~~gd~~~~~~~~~l~l~a--~~~a~~L 224 (242)
T 1tq5_A 158 QDMELYRWALLKDEQSVHQIAAERRVWIQVVKGNVTIN-------G----VKASTSDGLAIWDEQAISIHA--DSDSEVL 224 (242)
T ss_dssp SSCEEEEEEECTTCEEEECCCTTCEEEEEEEESEEEET-------T----EEEETTCEEEEESCSCEEEEE--SSSEEEE
T ss_pred CCCEEEEEEECCCCEEEeecCCCcEEEEEEccCcEEEC-------C----EEeCCCCEEEECCCCeEEEEe--CCCCEEE
Confidence 35678889999998653223333356799999998862 3 369999999998766545555 3566666
Q ss_pred EEEcCCCC
Q 048039 157 AALNSQNP 164 (204)
Q Consensus 157 ~~~~s~~p 164 (204)
.+-....+
T Consensus 225 l~~~~~~~ 232 (242)
T 1tq5_A 225 LFDLPPVS 232 (242)
T ss_dssp EEEECCC-
T ss_pred EEECCccC
Confidence 55333333
No 170
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=90.18 E-value=0.51 Score=40.41 Aligned_cols=67 Identities=18% Similarity=0.294 Sum_probs=47.5
Q ss_pred EEECC-CCCCCCccCCCC-cEEEEEEeCcEEEEEEecCC-------------------------------------CCce
Q 048039 84 VDFAP-DGLNPPHTHPRA-SEIMTLLEGTLEVGFIGTAP-------------------------------------DYRH 124 (204)
Q Consensus 84 ~~i~p-g~~~ppH~H~~a-~E~~yVl~G~~~~~~~~~~~-------------------------------------~~~~ 124 (204)
+-+.+ |...++|+++.. .-+..++.|+=++.+..+.. ..+.
T Consensus 176 ~~~G~~gs~t~~H~D~~~~~~~~~~v~G~K~~~L~pP~~~~~ly~~~~~~~~~~~~~~~~w~~~~~P~~~~~~~p~~~~~ 255 (336)
T 3k2o_A 176 FVMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTRDEGGNQQDEAITWFNVIYPRTQLPTWPPEFKP 255 (336)
T ss_dssp EEEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECTTSCHHHHCCCHHHHGGGTTCHHHHHHHTGGGGGSTTSCGGGCC
T ss_pred EEECCCCccCCcccCCCccceeeEEEeeeEEEEEeCCCcchhcccCcccccCCCccchhhhhhhhCcchhhhcccccCce
Confidence 44544 456788888653 25788888987776654320 0012
Q ss_pred eEEEeCCCcEEEECCCCeEEEEeCCC
Q 048039 125 FSKILNKGDVFVFPMGLLHYQRNVGK 150 (204)
Q Consensus 125 ~~~~L~~Gd~~~~p~g~~H~~~N~g~ 150 (204)
...+|++||++++|+|..|+..|..+
T Consensus 256 ~~~~l~pGd~l~iP~gw~H~v~~~~~ 281 (336)
T 3k2o_A 256 LEILQKPGETVFVPGGWWHVVLNLDT 281 (336)
T ss_dssp EEEEECTTCEEEECTTCEEEEEESSC
T ss_pred EEEEECCCCEEEeCCCCcEEEecCCC
Confidence 47889999999999999999999864
No 171
>3m3i_A Putative uncharacterized protein; PFAM:PF06172, structural genomics, structural genomics of pathogenic protozoa consortium, SGPP; 2.35A {Leishmania major}
Probab=88.96 E-value=7.9 Score=31.16 Aligned_cols=135 Identities=12% Similarity=0.138 Sum_probs=80.9
Q ss_pred CCCCceEEEEeccccC----CCCCc-eEEEEEEEECCCCCCCCccCCCCcEEEEEEeCc-EEEEEEecCCCC--------
Q 048039 57 NPMGSKATPVYVQQIP----GLNTL-GLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGT-LEVGFIGTAPDY-------- 122 (204)
Q Consensus 57 ~~~g~~~~~~~~~~~P----~l~~~-g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~-~~~~~~~~~~~~-------- 122 (204)
.|-|+..++.+..... .-... ..+..+.-+.+|....+|. -.+.|+.+-..|. +++.+.+++|..
T Consensus 33 HPEGG~yrEt~Rs~~~v~~~~~~~R~~~TaIYfLL~~g~~S~~HR-v~sdEiW~~h~G~pL~l~li~~dG~~~~~~~~~~ 111 (225)
T 3m3i_A 33 HPEGGYYSEVVRSAHKVDNEEGNRRHAYTTIYFLCTPESPSHLHR-LCSDETWMYHAGDPLQLHVILKDPQDEDRIAAQP 111 (225)
T ss_dssp CTTSSEEEEEEECSSEEECTTSCEEESCEEEEEEECSSSCEEEEE-CSSEEEEEEEEESCEEEEEEESSSTTTTC-----
T ss_pred CCCCceEEEEEECCCcccCCCCCCcccceeEEEEecCCCCcccEE-ecCCEEEEEECCCCEEEEEEcCCCcccccccccc
Confidence 4567777776654331 00111 1345556678887544444 3579999999998 678777655200
Q ss_pred ------------------ceeEEEeCC----Cc--EEEECCCCeEEEEeCCCC-----CEEEEEEEcCCCCCceeccccc
Q 048039 123 ------------------RHFSKILNK----GD--VFVFPMGLLHYQRNVGKV-----NAVAIAALNSQNPGTSSIAPAL 173 (204)
Q Consensus 123 ------------------~~~~~~L~~----Gd--~~~~p~g~~H~~~N~g~~-----~a~~i~~~~s~~pg~~~~~~~~ 173 (204)
..+...|.+ |+ -+++|+|........+++ ...+++..- -||+..-.-.+
T Consensus 112 ~~~P~~~~~~~~~~~~~~~~~~~~LG~d~~~Ge~pQ~vVP~G~WqaA~~~~~~~~~~~~~sLVsCtV--aPGFdF~DFel 189 (225)
T 3m3i_A 112 PAAPQAETDTADARPKYQVYRRVLVGARVERGELLQYTVPGGAIFGSSVAADGADGQAGYSLVSCIV--SPGFDYRDFEI 189 (225)
T ss_dssp -------------CCSSCEEEEEEESSCGGGTCBSEEEECTTCEEEEECCSSSTTCSSSCEEEEEEE--ESCCCGGGCEE
T ss_pred cccccccccccccccccCceEEEEeCCCccCCceeEEEeCCCEEEEEEECCCCcCcCCCeEEEEEEE--cCCccchhcEe
Confidence 345666744 66 678999998887765543 445555432 35554333222
Q ss_pred ccCCCCCCHHHHHHhcCCCHHHHHHHH
Q 048039 174 FTSKPVLNDEIISKTFLFDKKNVAILR 200 (204)
Q Consensus 174 f~~~p~~~~~vl~~~f~~~~~~v~~l~ 200 (204)
++.+-|.+.|.--++.|++|-
T Consensus 190 ------~~~~~L~~~~P~~~~~I~~lt 210 (225)
T 3m3i_A 190 ------FTQAQLMELYPQHEAVIKQMA 210 (225)
T ss_dssp ------CBHHHHHHHCGGGHHHHHHHS
T ss_pred ------cCHHHHHHHCchHHHHHHHhc
Confidence 455666667777777777773
No 172
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=88.65 E-value=0.76 Score=40.19 Aligned_cols=55 Identities=13% Similarity=0.062 Sum_probs=40.7
Q ss_pred eEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCe
Q 048039 78 GLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLL 142 (204)
Q Consensus 78 g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~ 142 (204)
.+++.++++.++.. ...+. +..+++|++|++++... + .+..|++||++++|++..
T Consensus 323 ~F~v~~~~l~~~~~--~~~~~-~~~il~v~~G~~~l~~~-----~--~~~~l~~G~~~fvpa~~~ 377 (394)
T 2wfp_A 323 DFAFSLHDLALQET--SIGQH-SAAILFCVEGEAVLRKD-----E--QRLVLKPGESAFIGADES 377 (394)
T ss_dssp SCEEEEEECCSSCE--EECCS-SCEEEEEEEEEEEEEET-----T--EEEEECTTCEEEECGGGC
T ss_pred EEEEEEEEEcCCeE--EecCC-CcEEEEEEeceEEEEEC-----C--eEEEEccCcEEEEeCCCc
Confidence 46777888875532 12344 47999999999997652 3 578999999999999853
No 173
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=88.65 E-value=0.65 Score=40.75 Aligned_cols=66 Identities=14% Similarity=0.156 Sum_probs=49.0
Q ss_pred EEE-CCCCCCCCccCCCCc-EEEEEEeCcEEEEEEecCC-----------------------CCceeEEEeCCCcEEEEC
Q 048039 84 VDF-APDGLNPPHTHPRAS-EIMTLLEGTLEVGFIGTAP-----------------------DYRHFSKILNKGDVFVFP 138 (204)
Q Consensus 84 ~~i-~pg~~~ppH~H~~a~-E~~yVl~G~~~~~~~~~~~-----------------------~~~~~~~~L~~Gd~~~~p 138 (204)
+-+ +.|+..+.|+.+... -+..+++|+=++.+..+.. ..+.....+++||++++|
T Consensus 179 l~mGp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~ly~~~~~s~~~~e~~~~~~~~~~~~v~l~pGe~lfIP 258 (397)
T 3kv9_A 179 CLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVP 258 (397)
T ss_dssp EEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSGGGGGSCGGGGSSCCEEEEEETTCEEEEC
T ss_pred EEEcCCCCCCCEEECCCCCceeeeecCceEEEEEeCCcccccccccccccCCCcchhhhccccCceEEEEECCCCEEEeC
Confidence 344 456678889987643 3568999998887765420 012367899999999999
Q ss_pred CCCeEEEEeCC
Q 048039 139 MGLLHYQRNVG 149 (204)
Q Consensus 139 ~g~~H~~~N~g 149 (204)
+|..|+..|..
T Consensus 259 sGW~H~V~nle 269 (397)
T 3kv9_A 259 TGWIHAVLTSQ 269 (397)
T ss_dssp TTCEEEEEEEE
T ss_pred CCCeEEccCCc
Confidence 99999999973
No 174
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=88.39 E-value=3.4 Score=33.88 Aligned_cols=72 Identities=8% Similarity=-0.072 Sum_probs=48.4
Q ss_pred ceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEE
Q 048039 77 LGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAI 156 (204)
Q Consensus 77 ~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i 156 (204)
+.+.+..+++++|.........+. -++||++|++++. +. ......|.+||.+++..+..-.+.+. ++++++
T Consensus 180 ~~~~~~~~~L~~g~~~~~~~~~~~-~~l~v~~G~v~v~--g~----~~~~~~l~~gd~~~l~~~~~l~l~a~--~~a~~L 250 (256)
T 2vec_A 180 QQVWLHHIVLDKGESANFQLHGPR-AYLQSIHGKFHAL--TH----HEEKAALTCGDGAFIRDEANITLVAD--SPLRAL 250 (256)
T ss_dssp SSCEEEEEEECTTCEEEEECSSSE-EEEEEEESCEEEE--ET----TEEEEEECTTCEEEEESCSEEEEEES--SSEEEE
T ss_pred CCcEEEEEEECCCCEEEEecCCCe-EEEEEEECEEEEC--Cc----cccceEECCCCEEEECCCCeEEEEeC--CCCEEE
Confidence 356788889999987543333333 7899999999874 21 11356799999999976655445442 456555
Q ss_pred E
Q 048039 157 A 157 (204)
Q Consensus 157 ~ 157 (204)
.
T Consensus 251 L 251 (256)
T 2vec_A 251 L 251 (256)
T ss_dssp E
T ss_pred E
Confidence 4
No 175
>3loi_A Putative uncharacterized protein; beta barrel, unknown function; 2.10A {Branchiostoma belcheri tsingtauense} SCOP: b.82.1.0 PDB: 3lzz_A*
Probab=88.38 E-value=7.3 Score=30.06 Aligned_cols=130 Identities=17% Similarity=0.172 Sum_probs=81.3
Q ss_pred CCC-CceEEEEecccc----CCC-CCc-eEEEEEEEECCCCCCCCccCCCCcEEEEEEeCc-EEEEEEecCCCCceeEEE
Q 048039 57 NPM-GSKATPVYVQQI----PGL-NTL-GLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGT-LEVGFIGTAPDYRHFSKI 128 (204)
Q Consensus 57 ~~~-g~~~~~~~~~~~----P~l-~~~-g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~-~~~~~~~~~~~~~~~~~~ 128 (204)
.|- |+..++...... +.. ..+ ..+..+.-+.+|....+|.= .+.|+.+-..|. +++.+.+++ ++.+...
T Consensus 24 HPEEGG~yrEt~rs~~~v~~~~~~~~R~~~TaIYfLL~~~~~S~~HRv-~sdEiW~~~~G~pL~l~~~~~d--G~~~~~~ 100 (172)
T 3loi_A 24 HPASGGWFRETYRSDVQVEAEGFDGKRSVLTMIYYLMQAGQPDPFHRV-KSDETFVHNLGGSMKIHMIHPD--GSYSCSI 100 (172)
T ss_dssp CTTSSSEEEEEEECSCEECCTTSSSCEESCEEEEEEEETTCCEEEEEC-SSEEEEEEEEESCEEEEEECTT--SCEEEEE
T ss_pred CCcCCCeEEEEEECcCcccCCCCCCCcccceEEEEEEcCCCCccCEEe-cCCEEEEEEcCCCEEEEEEcCC--CceEEEE
Confidence 455 777776554421 111 111 23455566778875555544 469999999996 788888766 5556777
Q ss_pred eC----CCc---EEEECCCCeEEEEeCCCCCEEEEEEEcCCCCCceecccccccCCCCCCHHHHHHhcCCCHHHHHHHH
Q 048039 129 LN----KGD---VFVFPMGLLHYQRNVGKVNAVAIAALNSQNPGTSSIAPALFTSKPVLNDEIISKTFLFDKKNVAILR 200 (204)
Q Consensus 129 L~----~Gd---~~~~p~g~~H~~~N~g~~~a~~i~~~~s~~pg~~~~~~~~f~~~p~~~~~vl~~~f~~~~~~v~~l~ 200 (204)
|. +|+ -+++|+|.....+. ....+++.. --||+..-.-.+ .+.+-|.+.|.--++.|++|-
T Consensus 101 LG~d~~~Ge~~pQ~vVP~G~WqaA~~---~~~~LVsct--VaPGF~f~dfel------~~~~~L~~~~P~~~~~I~~lt 168 (172)
T 3loi_A 101 LGNPLEHPEARHQVVVPRRVWFAQEV---DGYCLASVL--VAPGFDFKDFSL------GKREELIKEYPQHRDVIMRCT 168 (172)
T ss_dssp ESCTTTSTTCBSEEEECTTCEEEEEE---SSEEEEEEE--EESCCCGGGCEE------CCHHHHHHHCGGGHHHHHHTS
T ss_pred eCCCcccCCcceEEEECCCEEEEEEe---CCcEEEEEE--EcCCccchhcEE------cCHHHHHHHCchHHHHHHHhc
Confidence 75 577 78899999887766 344555443 245654333222 456677777877777777763
No 176
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=87.87 E-value=0.52 Score=41.12 Aligned_cols=38 Identities=26% Similarity=0.329 Sum_probs=29.5
Q ss_pred eEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEEEEcCC
Q 048039 125 FSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIAALNSQ 162 (204)
Q Consensus 125 ~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~~~~s~ 162 (204)
.+..-++||.++||+|.+|..+|..+.-.+..-.++.+
T Consensus 293 ~~~~Q~~GeavfiPaG~~HQV~Nl~~~i~va~df~spe 330 (392)
T 2ypd_A 293 CTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPE 330 (392)
T ss_dssp EEEEEETTCEEEECTTCEEEEEESSEEEEEEEEECCGG
T ss_pred EEEEEcCCCEEEecCCCHHHHhcccchhhHhhhhcChh
Confidence 57788999999999999999999875544444444444
No 177
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=87.85 E-value=0.7 Score=39.18 Aligned_cols=55 Identities=20% Similarity=0.259 Sum_probs=40.1
Q ss_pred eEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCe
Q 048039 78 GLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLL 142 (204)
Q Consensus 78 g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~ 142 (204)
.+++.++++..+... .......+++|++|++++... + ....|++||.+++|++.-
T Consensus 250 ~F~~~~~~~~~~~~~---~~~~~~~il~v~~G~~~l~~~-----~--~~~~l~~G~~~~vpa~~~ 304 (319)
T 1qwr_A 250 YFSVYKWDINGEAEM---AQDESFLICSVIEGSGLLKYE-----D--KTCPLKKGDHFILPAQMP 304 (319)
T ss_dssp SCEEEEEEEEEEEEE---CCCSSCEEEEEEEEEEEEEET-----T--EEEEEETTCEEEECTTCC
T ss_pred EEEEEEEEECCceEE---ccCCccEEEEEEcCeEEEEEC-----C--EEEEEcCCcEEEEeCCCc
Confidence 356777777644322 222358899999999998652 3 478999999999999874
No 178
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=85.92 E-value=0.81 Score=41.52 Aligned_cols=62 Identities=13% Similarity=0.158 Sum_probs=46.7
Q ss_pred CCCCCCCCccCCCC-cEEEEEEeCcEEEEEEecCC-----------------------CCceeEEEeCCCcEEEECCCCe
Q 048039 87 APDGLNPPHTHPRA-SEIMTLLEGTLEVGFIGTAP-----------------------DYRHFSKILNKGDVFVFPMGLL 142 (204)
Q Consensus 87 ~pg~~~ppH~H~~a-~E~~yVl~G~~~~~~~~~~~-----------------------~~~~~~~~L~~Gd~~~~p~g~~ 142 (204)
+.|+...+|..+.. .-+.+|++|+=.+.+..+.. +++.....+++||.+++|+|..
T Consensus 304 ~~gS~Td~HiD~~gts~w~~v~~GrK~w~L~PPt~~nl~~y~~w~~s~~~~~wfgd~l~~~~~~v~l~pGEtlfIPsGW~ 383 (528)
T 3pur_A 304 MAGSYTDFHVDFGGSSVYYHILKGEKIFYIAAPTEQNFAAYQAHETSPDTTTWFGDIANGAVKRVVIKEGQTLLIPAGWI 383 (528)
T ss_dssp CTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSSCCSCCGGGGTTTCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeeECCCCCceeEEEecceEEEEEeCCCccchhhhhhhccCCchhhhhcccccccEEEEEECCCCEEEecCCce
Confidence 45556788887553 35778999998887765431 1123478999999999999999
Q ss_pred EEEEeC
Q 048039 143 HYQRNV 148 (204)
Q Consensus 143 H~~~N~ 148 (204)
|+..|.
T Consensus 384 HaV~tl 389 (528)
T 3pur_A 384 HAVLTP 389 (528)
T ss_dssp EEEEEE
T ss_pred EEEecC
Confidence 999997
No 179
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=85.07 E-value=2.7 Score=35.20 Aligned_cols=55 Identities=15% Similarity=0.080 Sum_probs=39.1
Q ss_pred eEEEEEEEECCCCCCCCccCCCCc-EEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEE
Q 048039 78 GLSMVRVDFAPDGLNPPHTHPRAS-EIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHY 144 (204)
Q Consensus 78 g~s~~~~~i~pg~~~ppH~H~~a~-E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~ 144 (204)
.+++.++++...... .. .+. .++.|++| +++... + ....|++||++++|++.-.+
T Consensus 229 ~F~v~~~~~~~~~~~---~~-~~~~~il~v~~G-~~i~~~-----~--~~~~l~~G~~~~ipa~~~~~ 284 (300)
T 1zx5_A 229 NFGLEVVDVTGTAEI---KT-GGVMNILYAAEG-YFILRG-----K--ETADLHRGYSCLVPASTDSF 284 (300)
T ss_dssp SEEEEEEEEEEEEEE---EC-CSBCEEEEEEES-CEEEES-----S--SEEEECTTCEEEECTTCCEE
T ss_pred eEEEEEEEECCceEE---ec-CCceEEEEEccc-EEEEeC-----C--eEEEEccceEEEEeCCCceE
Confidence 356777777642222 23 447 89999999 888752 3 36789999999999988544
No 180
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=84.88 E-value=2.2 Score=30.16 Aligned_cols=52 Identities=8% Similarity=0.121 Sum_probs=35.8
Q ss_pred EEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEE
Q 048039 82 VRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVF 135 (204)
Q Consensus 82 ~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~ 135 (204)
....+++|...-..-. ....+++|++|.+.+...+.+| .+.....+.+||++
T Consensus 29 ~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~~~~g-~~~~~~~~~~g~~~ 80 (149)
T 2pqq_A 29 SEVTLARGDTLFHEGD-PGDRLYVVTEGKVKLHRTSPDG-RENMLAVVGPSELI 80 (149)
T ss_dssp EEEEECTTCEEECTTS-EECEEEEEEESCEEEEEECTTS-SEEEEEEECTTCEE
T ss_pred eEEEeCCCCEEECCCC-CCCeEEEEEecEEEEEEECCCC-cEEEEEEcCCcCEe
Confidence 4567788876422222 2377999999999998876542 33346788999987
No 181
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=84.54 E-value=3.4 Score=34.22 Aligned_cols=73 Identities=12% Similarity=0.064 Sum_probs=49.1
Q ss_pred ceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECC-C----CeEEEEeCCCC
Q 048039 77 LGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPM-G----LLHYQRNVGKV 151 (204)
Q Consensus 77 ~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~-g----~~H~~~N~g~~ 151 (204)
..+.+..+++++|........++..-++||++|++++. +. ...|.+||.+++.. + ..-.+.+. +
T Consensus 165 ~~~~~~~~~L~~g~~~~~~~~~~~~~~lyv~~G~v~v~-------g~--~~~l~~~d~~~~~~~~~~~~~~l~l~a~--~ 233 (277)
T 2p17_A 165 VPVTMVEMIVEPGTTVVQDLPGHYNGFLYILEGSGVFG-------AD--NIEGKAGQALFFSRHNRGEETELNVTAR--E 233 (277)
T ss_dssp SCEEEEEEEECTTCEEEEEEETTCEEEEEEEESEEEET-------TT--TEEEETTEEEEECCCCTTCEEEEEEEES--S
T ss_pred CCCEEEEEEECCCCEEEeccCCCCEEEEEEEeCeEEEC-------CC--ceEeCCCcEEEEcCCCCCccceEEEEeC--C
Confidence 46788889999999754333333367899999998762 21 24699999999985 5 33344443 4
Q ss_pred CEEEEEEEc
Q 048039 152 NAVAIAALN 160 (204)
Q Consensus 152 ~a~~i~~~~ 160 (204)
+++++.+-.
T Consensus 234 ~a~~Ll~~G 242 (277)
T 2p17_A 234 KLRLLLYAG 242 (277)
T ss_dssp SEEEEEEEE
T ss_pred CcEEEEEec
Confidence 577665543
No 182
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=84.30 E-value=2.1 Score=30.01 Aligned_cols=54 Identities=19% Similarity=0.214 Sum_probs=32.8
Q ss_pred EEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCcee---EEEeCCCcEEE
Q 048039 81 MVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHF---SKILNKGDVFV 136 (204)
Q Consensus 81 ~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~---~~~L~~Gd~~~ 136 (204)
+....+++|...-.- ......+++|++|.+.+...+.+| .+.. ...+.+||++=
T Consensus 29 ~~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~~~~~g-~~~~~~~~~~~~~G~~fG 85 (142)
T 3mdp_A 29 SEEKSFPTGSVIFKE-NSKADNLMLLLEGGVELFYSNGGA-GSAANSTVCSVVPGAIFG 85 (142)
T ss_dssp EEEEEECTTCEEECT-TSBCCEEEEEEESCEEEECC----------CEEEEECTTCEEC
T ss_pred hcEEecCCCCEEEeC-CCCCCcEEEEEeCEEEEEEECCCC-CceEeeeEEEecCCCEec
Confidence 355677888754222 222488999999999998755442 2223 56789999883
No 183
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=83.78 E-value=1.1 Score=38.90 Aligned_cols=63 Identities=14% Similarity=0.165 Sum_probs=47.3
Q ss_pred CCCCCCCCccCCCCc-EEEEEEeCcEEEEEEecCC-----------------------CCceeEEEeCCCcEEEECCCCe
Q 048039 87 APDGLNPPHTHPRAS-EIMTLLEGTLEVGFIGTAP-----------------------DYRHFSKILNKGDVFVFPMGLL 142 (204)
Q Consensus 87 ~pg~~~ppH~H~~a~-E~~yVl~G~~~~~~~~~~~-----------------------~~~~~~~~L~~Gd~~~~p~g~~ 142 (204)
++|+..+.|..+... -+..+++|+=++.+..+.. ..+....++++||++++|+|..
T Consensus 155 p~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtLfIPsGWw 234 (371)
T 3k3o_A 155 VRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTGWI 234 (371)
T ss_dssp CTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSTTGGGSCGGGTSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeEECCCCCceeEEEeeeEEEEEEECCCccccccccccccCCccchhhcccccCceEEEEECCCcEEEeCCCCe
Confidence 455678899887644 3567999998887764320 0133688999999999999999
Q ss_pred EEEEeCC
Q 048039 143 HYQRNVG 149 (204)
Q Consensus 143 H~~~N~g 149 (204)
|+..|..
T Consensus 235 H~V~nle 241 (371)
T 3k3o_A 235 HAVLTPV 241 (371)
T ss_dssp EEEEEEE
T ss_pred EEEecCC
Confidence 9999973
No 184
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=83.71 E-value=0.81 Score=38.48 Aligned_cols=47 Identities=15% Similarity=0.111 Sum_probs=34.3
Q ss_pred CcEEEEEEeC-cEEEEEEecCC---------CCc------eeEEEeCCCcEEEECCCCeEEEE
Q 048039 100 ASEIMTLLEG-TLEVGFIGTAP---------DYR------HFSKILNKGDVFVFPMGLLHYQR 146 (204)
Q Consensus 100 a~E~~yVl~G-~~~~~~~~~~~---------~~~------~~~~~L~~Gd~~~~p~g~~H~~~ 146 (204)
-.|++|+++- ++.+++..... +++ +....|++||.+++|+|.+|.+.
T Consensus 117 KpE~~y~L~~~~~~~Gf~~~~~~~~~~~~l~~~~~~~~~lLn~v~l~pGd~~~ipaGt~HA~~ 179 (300)
T 1zx5_A 117 VESAWLVFNKGKAYAGFKEDVKIEELEEKLKEEDFDFKTLLNTFETTPYDTFVIRPGIPHAGE 179 (300)
T ss_dssp CCEEEEECSSCEEEEEESSCCCHHHHHHHHTSSSCCGGGGEEEEECCTTCEEEECTTCCEEEE
T ss_pred CcEEEEEcccHHHhhCCCCCCCHHHHHHHHHhCchhHHHHhceeECCCCCEEEcCCCCceEcC
Confidence 3899999994 56666532110 122 45789999999999999999985
No 185
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=82.84 E-value=12 Score=30.91 Aligned_cols=83 Identities=8% Similarity=-0.032 Sum_probs=53.8
Q ss_pred EEEEeccccCCCCCceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEe--CC--------C
Q 048039 63 ATPVYVQQIPGLNTLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKIL--NK--------G 132 (204)
Q Consensus 63 ~~~~~~~~~P~l~~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L--~~--------G 132 (204)
+..++... .++. -+.+..++|++|.......-.+ +-.++.+.|++++.+. + +++.+ .. .
T Consensus 16 ~~~itp~~-a~~~--y~~f~~~~L~~Ge~~~~~~~~~-E~~iv~l~G~~~V~~~-----g--~~~~~~g~R~svF~~~~p 84 (270)
T 2qjv_A 16 IQHISPQN-AGWE--YVGFDVWQLXAGESITLPSDER-ERCLVLVAGLASVXAA-----D--SFFYRIGQRMSPFERIPA 84 (270)
T ss_dssp EEEECHHH-HTSS--SCEEEEEEECTTCEEEECCSSE-EEEEEEEESCEEEEET-----T--EEEEEECCCSSGGGCSCC
T ss_pred EEEeCCCC-CCcE--EeEEEEEEecCCCEEEecCCCc-EEEEEEecceEEEEEC-----C--EEEeccccccccccCCCC
Confidence 55555432 2332 2567788999999766555532 4456678899999985 3 45554 23 4
Q ss_pred cEEEECCCCeEEEEeCCCCCEEEEEE
Q 048039 133 DVFVFPMGLLHYQRNVGKVNAVAIAA 158 (204)
Q Consensus 133 d~~~~p~g~~H~~~N~g~~~a~~i~~ 158 (204)
|++++|+|..-.+...+ ++++...
T Consensus 85 ~~lYvp~g~~v~i~a~~--~~~~~v~ 108 (270)
T 2qjv_A 85 YSVYLPHHTEAXVTAET--DLELAVC 108 (270)
T ss_dssp CEEEECSSCCEEEEESS--SEEEEEE
T ss_pred cEEEECCCCEEEEEecC--CceEEEE
Confidence 89999999966676654 4665544
No 186
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=82.68 E-value=0.93 Score=38.40 Aligned_cols=47 Identities=21% Similarity=0.218 Sum_probs=32.2
Q ss_pred CcEEEEEEeC--cEEEEEEecCC----------CC----ceeEEEeCCCcEEEECCCCeEEEE
Q 048039 100 ASEIMTLLEG--TLEVGFIGTAP----------DY----RHFSKILNKGDVFVFPMGLLHYQR 146 (204)
Q Consensus 100 a~E~~yVl~G--~~~~~~~~~~~----------~~----~~~~~~L~~Gd~~~~p~g~~H~~~ 146 (204)
-.|++|+++. ...+.++...- ++ -+....|++||.+++|+|.+|.+.
T Consensus 117 KpE~~y~L~~~~~~~~~~G~~~~~~e~l~~~i~~~~~~~lLn~v~l~pGd~~~ipaGt~HA~~ 179 (319)
T 1qwr_A 117 KTECWYIIDCKENAEIIYGHTARSKTELVTMINSGDWEGLLRRIKIKPGDFYYVPSGTLHALC 179 (319)
T ss_dssp CCEEEEEEEECTTCEEEEEECCSSHHHHHHHHHTTCHHHHEEEEECCTTCEEEECTTCCEEEC
T ss_pred CCEEEEEccCCCchhheeCCCCCCHHHHHHHHHcCCHHHhceEEEcCCCCEEEcCCCCceEec
Confidence 4899999995 23333322110 00 024789999999999999999984
No 187
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=81.69 E-value=1.5 Score=38.38 Aligned_cols=63 Identities=17% Similarity=0.224 Sum_probs=47.8
Q ss_pred CCCCCCCCccCCCC-cEEEEEEeCcEEEEEEecCC-----------------------CCceeEEEeCCCcEEEECCCCe
Q 048039 87 APDGLNPPHTHPRA-SEIMTLLEGTLEVGFIGTAP-----------------------DYRHFSKILNKGDVFVFPMGLL 142 (204)
Q Consensus 87 ~pg~~~ppH~H~~a-~E~~yVl~G~~~~~~~~~~~-----------------------~~~~~~~~L~~Gd~~~~p~g~~ 142 (204)
+.|+..+.|..+.. .-+..|++|+=++.+..+.. ..+.....+++||++++|+|..
T Consensus 182 p~gS~T~fHiD~~gTs~w~~vi~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtlfIPsGWw 261 (392)
T 3pua_A 182 VKDSYTDFHIDSGGASAWYHVLKGEKTFYLIRPASANISLYERWRSASNHSEMFFADQVDKCYKCIVKQGQTLFIPSGWI 261 (392)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSTTGGGSCGGGGSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCEeECCCCCceeeeeccceEEEEEECCCcccccchhhcccCcchhhhhhcccccceEEEEECCCcEEeeCCCce
Confidence 55667888988654 35678999998887764331 0123688999999999999999
Q ss_pred EEEEeCC
Q 048039 143 HYQRNVG 149 (204)
Q Consensus 143 H~~~N~g 149 (204)
|+..|..
T Consensus 262 H~V~nle 268 (392)
T 3pua_A 262 YATLTPV 268 (392)
T ss_dssp EEEEEEE
T ss_pred EEEecCC
Confidence 9999973
No 188
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=81.31 E-value=4.5 Score=30.67 Aligned_cols=118 Identities=9% Similarity=-0.009 Sum_probs=69.5
Q ss_pred EEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEEC-----CCCeEEEEeCCCCCEEEE
Q 048039 82 VRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFP-----MGLLHYQRNVGKVNAVAI 156 (204)
Q Consensus 82 ~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p-----~g~~H~~~N~g~~~a~~i 156 (204)
....+++|...-..-.+ ...+++|++|.+.+...+.+| .+.....+.+||++-.. ....+.... .+++.++
T Consensus 23 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~g-~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a--~~~~~v~ 98 (216)
T 4ev0_A 23 QRRLYPQGKPIFYQGDL-GQALYLVASGKVRLFRTHLGG-QERTLALLGPGELFGEMSLLDEGERSASAVA--VEDTELL 98 (216)
T ss_dssp EEEEECTTCEEECTTCB-CCEEEEEEESCEEEEEECSSS-CEEEEEEECTTCEECHHHHHHCCBCSSEEEE--SSSEEEE
T ss_pred eEEEeCCCCEEEeCCCC-CCEEEEEEeCEEEEEEECCCC-CEEEEEEecCCCEEeehhhcCCCCcceEEEE--cCCEEEE
Confidence 44667787754322222 478999999999998876553 33346788999987321 112233333 3556666
Q ss_pred EEEc-------CCCCCcee----------------------------cccccc---cCC----CCCCHHHHHHhcCCCHH
Q 048039 157 AALN-------SQNPGTSS----------------------------IAPALF---TSK----PVLNDEIISKTFLFDKK 194 (204)
Q Consensus 157 ~~~~-------s~~pg~~~----------------------------~~~~~f---~~~----p~~~~~vl~~~f~~~~~ 194 (204)
.+-. ..+|.+.. ++..+. ..+ ..++.+-+|..+|++++
T Consensus 99 ~i~~~~~~~l~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Rl~~~L~~~~~~~~~~~~~~t~~~lA~~lg~sr~ 178 (216)
T 4ev0_A 99 ALFREDYLALIRRLPLVAHNLAALLARRLREADLELDLLSFEEARNRVAYALLKLLRQGLGPLFQIRHHELAALAGTSRE 178 (216)
T ss_dssp EEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCHHHHHHHHTSCHH
T ss_pred EEcHHHHHHHHHHCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCccCCCCCHHHHHHHhCCCHH
Confidence 5432 12443311 001110 001 13789999999999999
Q ss_pred HHHHHHhcC
Q 048039 195 NVAILRSKF 203 (204)
Q Consensus 195 ~v~~l~~~~ 203 (204)
.+.++.+++
T Consensus 179 tvsR~l~~l 187 (216)
T 4ev0_A 179 TVSRVLHAL 187 (216)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 988887654
No 189
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=80.49 E-value=4.5 Score=30.20 Aligned_cols=115 Identities=10% Similarity=0.088 Sum_probs=47.8
Q ss_pred EEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEE-E---CCCCeE--EEEeCCCCCEEE
Q 048039 82 VRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFV-F---PMGLLH--YQRNVGKVNAVA 155 (204)
Q Consensus 82 ~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~-~---p~g~~H--~~~N~g~~~a~~ 155 (204)
....+++|...-.- ......+++|++|.+.+...+.+| .+.....+.+||++- + -.+.++ .+.. -+++.+
T Consensus 31 ~~~~~~~g~~l~~~-G~~~~~~y~i~~G~v~~~~~~~~G-~e~~~~~~~~g~~~ge~~~~~~~~~~~~~~~a--~~~~~v 106 (194)
T 3dn7_A 31 QLKKVRKKETLLKT-GEICRINYFVVKGCLRLFFIDEKG-IEQTTQFAIENWWLSDYMAFQKQQPADFYIQS--VENCEL 106 (194)
T ss_dssp EEEEECTTCEEECT-TSBCCEEEEEEESEEEEEEECTTS-CEEEEEEEETTCEECCHHHHHHTCBCSSEEEE--SSCEEE
T ss_pred EEEEEcCCCEEECC-CCeeeEEEEeecCeEEEEEECCCC-CEEEEEEccCCcEEeehHHHhcCCCCceEEEE--ECCEEE
Confidence 35677777754222 122478999999999998876653 333456789999985 2 122232 3333 355666
Q ss_pred EEEEc-------CCCCCcee----------------------------cc------cccccCCCCCCHHHHHHhcCCCHH
Q 048039 156 IAALN-------SQNPGTSS----------------------------IA------PALFTSKPVLNDEIISKTFLFDKK 194 (204)
Q Consensus 156 i~~~~-------s~~pg~~~----------------------------~~------~~~f~~~p~~~~~vl~~~f~~~~~ 194 (204)
+.+-. ..+|.+.. ++ ..+.- .++.+-+|..+|++++
T Consensus 107 ~~i~~~~~~~l~~~~p~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~~~~~~~---~~t~~~iA~~lG~sre 183 (194)
T 3dn7_A 107 LSITYTEQENLFERIPALERYFRLVYQKSFAAAQLRSKFQHMYSKEEQYHNFSSRFPEFIQ---RVPQYLLASYLGFTPE 183 (194)
T ss_dssp EEEEHHHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHHHHHC-------------------------------------
T ss_pred EEEeHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHChHHHH---HCCHHHHHHHhCCCHH
Confidence 65432 23454311 00 01111 3778888889999999
Q ss_pred HHHHHHhcC
Q 048039 195 NVAILRSKF 203 (204)
Q Consensus 195 ~v~~l~~~~ 203 (204)
.+.+++++.
T Consensus 184 tlsR~l~~l 192 (194)
T 3dn7_A 184 YLSEIRKKY 192 (194)
T ss_dssp ---------
T ss_pred HHHHHHHhh
Confidence 888887653
No 190
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=80.32 E-value=2.1 Score=30.58 Aligned_cols=53 Identities=13% Similarity=0.189 Sum_probs=34.0
Q ss_pred EEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEE
Q 048039 81 MVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVF 135 (204)
Q Consensus 81 ~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~ 135 (204)
.....+++|...-..-.+ ...+++|++|.+.+...+.+| .+.....+.+||++
T Consensus 35 ~~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~g-~~~~~~~~~~G~~~ 87 (154)
T 2z69_A 35 SDLVNLDKGAYVFRQGEP-AHAFYYLISGCVKIYRLTPEG-QEKILEVTNERNTF 87 (154)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEESCEEEECCCC------CCEEECTTEEE
T ss_pred CcEEEecCCCEEecCCCc-cceEEEEEeCEEEEEEECCCC-CEEEEEEccCCCee
Confidence 345677888764332233 478999999999998654432 22245688999987
No 191
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=80.29 E-value=5 Score=30.16 Aligned_cols=53 Identities=15% Similarity=0.201 Sum_probs=35.9
Q ss_pred EEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEE
Q 048039 82 VRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFV 136 (204)
Q Consensus 82 ~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~ 136 (204)
....+++|...-.. ......+++|++|.+.+...+.+| .+.....+.+||++-
T Consensus 14 ~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~~~~~G-~~~~~~~~~~g~~~G 66 (207)
T 2oz6_A 14 HRRRYTAKSTIIYA-GDRCETLFFIIKGSVTILIEDDDG-REMIIGYLNSGDFFG 66 (207)
T ss_dssp EEEEECTTCEEECT-TSBCCEEEEEEESEEEEEEECTTS-CEEEEEEEETTCEES
T ss_pred ceEEECCCCEEEcC-CCCCCeEEEEEeCEEEEEEECCCC-CEEEEEEcCCCCCcc
Confidence 34567777754222 222478999999999998876553 333467789999884
No 192
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=80.28 E-value=5.1 Score=30.79 Aligned_cols=54 Identities=13% Similarity=0.148 Sum_probs=37.4
Q ss_pred EEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEE
Q 048039 81 MVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFV 136 (204)
Q Consensus 81 ~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~ 136 (204)
+....+++|...-..-.+ ...+++|++|.+.+...+.+| .+.....+.+||++-
T Consensus 29 ~~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~g-~~~~~~~~~~g~~~G 82 (231)
T 3e97_A 29 VTERNFQPDELVVEQDAE-GEALHLVTTGVVRVSRVSLGG-RERVLGDIYAPGVVG 82 (231)
T ss_dssp EEEEEECTTCBCCCTTCT-TTCEEEECSSEEEEEEECC---CEEEEEEEESSEEES
T ss_pred cEEEEECCCCEEEeCCCC-CCeEEEEEecEEEEEEECCCC-ceEEEEecCCCCEEe
Confidence 455778888865433333 478999999999998876542 233467889999873
No 193
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=80.09 E-value=28 Score=29.91 Aligned_cols=43 Identities=16% Similarity=0.001 Sum_probs=36.9
Q ss_pred cEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEE
Q 048039 101 SEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQR 146 (204)
Q Consensus 101 ~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~ 146 (204)
.--..|++|++++....++ +. .+..|.++|+.++-+-++|.|.
T Consensus 355 e~hY~v~~G~lTL~W~~~d--Gt-~~a~L~PDgSAwv~PFV~H~w~ 397 (443)
T 3g7d_A 355 ENHYVVTEGRLTLEWDGPD--GP-ASVELEPDGSAWTGPFVRHRWH 397 (443)
T ss_dssp EEEEEEEESCEEEEEEETT--EE-EEEEECTTCEEEECTTCCEEEE
T ss_pred cceEEEecCceEEEecCCC--Cc-cceEECCCCceeeccccccccc
Confidence 4445699999999998775 33 7899999999999999999998
No 194
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=79.98 E-value=5.3 Score=30.55 Aligned_cols=53 Identities=9% Similarity=0.072 Sum_probs=36.9
Q ss_pred EEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEE
Q 048039 82 VRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFV 136 (204)
Q Consensus 82 ~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~ 136 (204)
....+++|...-..-.+ ...+++|++|.+.+...+.+| .+.....+.+||++-
T Consensus 35 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~G-~~~~~~~~~~g~~~G 87 (230)
T 3iwz_A 35 HRRRYPTRTDVFRPGDP-AGTLYYVISGSVSIIAEEDDD-RELVLGYFGSGEFVG 87 (230)
T ss_dssp EEEEECTTCEEECTTSB-CCEEEEEEESCEEEEEECTTS-CEEEEEEECTTCEES
T ss_pred eEEEeCCCCEEECCCCC-CCeEEEEEeeEEEEEEECCCC-CEEEEEEecCCCEEE
Confidence 45677888764322222 478999999999998876653 333467789999984
No 195
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=79.85 E-value=5.9 Score=30.33 Aligned_cols=115 Identities=17% Similarity=0.202 Sum_probs=68.5
Q ss_pred EEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEE-----CCCCeEEEEeCCCCCEEEEE
Q 048039 83 RVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVF-----PMGLLHYQRNVGKVNAVAIA 157 (204)
Q Consensus 83 ~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~-----p~g~~H~~~N~g~~~a~~i~ 157 (204)
...+++|...-..-. ....+++|++|.+.+...+.+| .+.....+.+||++-. .....+..... +++.++.
T Consensus 31 ~~~~~~g~~i~~~G~-~~~~~y~i~~G~v~~~~~~~~g-~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A~--~~~~v~~ 106 (227)
T 3d0s_A 31 PVDFPRGHTVFAEGE-PGDRLYIIISGKVKIGRRAPDG-RENLLTIMGPSDMFGELSIFDPGPRTSSATTI--TEVRAVS 106 (227)
T ss_dssp EEEECTTCEEECTTC-CCCEEEEEEESCEEEEEECTTS-CEEEEEEECTTCEESCHHHHSCSCCSSEEEES--SCEEEEE
T ss_pred EEEeCCCCEEEcCCC-cCCEEEEEEeeEEEEEEECCCC-cEEEEEEecCCCEEeeHHHcCCCCceeEEEEc--ccEEEEE
Confidence 456777775422222 2478999999999998876553 3334568899998732 11223334443 4566655
Q ss_pred EEc-------CCCCCcee----------------------------cccc----------------cccCCCCCCHHHHH
Q 048039 158 ALN-------SQNPGTSS----------------------------IAPA----------------LFTSKPVLNDEIIS 186 (204)
Q Consensus 158 ~~~-------s~~pg~~~----------------------------~~~~----------------~f~~~p~~~~~vl~ 186 (204)
+-. .++|.... ++.. .+.- .++.+-||
T Consensus 107 i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~i~~--~~t~~~lA 184 (227)
T 3d0s_A 107 MDRDALRSWIADRPEISEQLLRVLARRLRRTNNNLADLIFTDVPGRVAKQLLQLAQRFGTQEGGALRVTH--DLTQEEIA 184 (227)
T ss_dssp EEHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHEEEETTEEEEEC--CCCHHHHH
T ss_pred EeHHHHHHHHHHChHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCcCCCceEEcC--CCCHHHHH
Confidence 432 24443310 0000 1111 48899999
Q ss_pred HhcCCCHHHHHHHHhcC
Q 048039 187 KTFLFDKKNVAILRSKF 203 (204)
Q Consensus 187 ~~f~~~~~~v~~l~~~~ 203 (204)
..+|++++.+.++.+++
T Consensus 185 ~~lg~sr~tvsR~l~~l 201 (227)
T 3d0s_A 185 QLVGASRETVNKALADF 201 (227)
T ss_dssp HHHTSCHHHHHHHHHHH
T ss_pred HHhCCcHHHHHHHHHHH
Confidence 99999999888876654
No 196
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=79.19 E-value=4.8 Score=31.07 Aligned_cols=52 Identities=12% Similarity=0.176 Sum_probs=36.1
Q ss_pred EEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEE
Q 048039 82 VRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVF 135 (204)
Q Consensus 82 ~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~ 135 (204)
....+++|...-..-.+ ...+++|++|.+.+...+.+| .+.....+.+||++
T Consensus 35 ~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~G-~~~~~~~~~~G~~~ 86 (237)
T 3fx3_A 35 VWRSYDRGETLFLQEEK-AQAIHVVIDGWVKLFRMTPTG-SEAVVSVFTRGESF 86 (237)
T ss_dssp EEEEECTTCEEECTTSC-CCEEEEEEESEEEEEEECTTS-CEEEEEEEETTEEE
T ss_pred EEEEECCCCEEEcCCCc-cceEEEEEeeEEEEEEECCCC-CEEEEEEeCCCCEe
Confidence 45677787764322222 478999999999999876553 33346778999988
No 197
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=78.80 E-value=6 Score=29.76 Aligned_cols=118 Identities=14% Similarity=0.122 Sum_probs=69.6
Q ss_pred EEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEEC----CC--CeEEEEeCCCCCEEE
Q 048039 82 VRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFP----MG--LLHYQRNVGKVNAVA 155 (204)
Q Consensus 82 ~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p----~g--~~H~~~N~g~~~a~~ 155 (204)
....+++|...-..-.+ ...+++|++|.+.+...+.+| .+.....+.+||++-.. .+ ..+.+.. .+++.+
T Consensus 20 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~g-~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a--~~~~~v 95 (210)
T 3ryp_A 20 HIHKYPSKSTLIHQGEK-AETLYYIVKGSVAVLIKDEEG-KEMILSYLNQGDFIGELGLFEEGQERSAWVRA--KTACEV 95 (210)
T ss_dssp EEEEECTTCEEECTTSB-CCEEEEEEESEEEEEEECTTC-CEEEEEEEETTCEESCTTTTSTTCBCSSEEEE--SSCEEE
T ss_pred EEEEeCCCCEEECCCCC-CCeEEEEEeCEEEEEEECCCC-CEEEEEEcCCCCEeeeHHHhcCCCCceEEEEE--CCcEEE
Confidence 34567777754322222 478999999999998876553 23345678999988432 12 2223333 355666
Q ss_pred EEEEc-------CCCCCceec----------------------------cccc------ccC--CC-----CCCHHHHHH
Q 048039 156 IAALN-------SQNPGTSSI----------------------------APAL------FTS--KP-----VLNDEIISK 187 (204)
Q Consensus 156 i~~~~-------s~~pg~~~~----------------------------~~~~------f~~--~p-----~~~~~vl~~ 187 (204)
+.+-. ..+|.+... +..+ ++. .| .++.+-+|.
T Consensus 96 ~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~t~~~iA~ 175 (210)
T 3ryp_A 96 AEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQ 175 (210)
T ss_dssp EEEEHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHTTSTTCEEETTEEEEECCHHHHHH
T ss_pred EEEcHHHHHHHHHHChHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhcCcCCCCCceEeccCHHHHHH
Confidence 65532 234543110 0000 000 00 378899999
Q ss_pred hcCCCHHHHHHHHhcC
Q 048039 188 TFLFDKKNVAILRSKF 203 (204)
Q Consensus 188 ~f~~~~~~v~~l~~~~ 203 (204)
.+|++++.+.++.+++
T Consensus 176 ~lg~sr~tvsR~l~~L 191 (210)
T 3ryp_A 176 IVGCSRETVGRILKML 191 (210)
T ss_dssp HHTCCHHHHHHHHHHH
T ss_pred HhCCcHHHHHHHHHHH
Confidence 9999999998887654
No 198
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=78.77 E-value=1.6 Score=38.06 Aligned_cols=24 Identities=17% Similarity=0.033 Sum_probs=21.0
Q ss_pred eeEEEeCCCcEEEECCCCeEEEEe
Q 048039 124 HFSKILNKGDVFVFPMGLLHYQRN 147 (204)
Q Consensus 124 ~~~~~L~~Gd~~~~p~g~~H~~~N 147 (204)
+....|++||.+++|+|.+|.+..
T Consensus 239 Ln~v~l~pGd~~fipAG~~HAy~~ 262 (394)
T 2wfp_A 239 LNVVKLNPGEAMFLFAETPHAYLQ 262 (394)
T ss_dssp EEEEEECTTCEEEECTTCCEEEEE
T ss_pred heEEECCCCCEEEcCCCCceEcCC
Confidence 457889999999999999999853
No 199
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=78.57 E-value=5 Score=30.11 Aligned_cols=36 Identities=22% Similarity=0.110 Sum_probs=27.2
Q ss_pred CcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEE
Q 048039 100 ASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFV 136 (204)
Q Consensus 100 a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~ 136 (204)
...+++|++|.+.+...+.+| .+.....+.+||++=
T Consensus 17 ~~~~y~i~~G~v~~~~~~~~g-~~~~~~~~~~G~~~G 52 (195)
T 3b02_A 17 ARTLYRLEEGLVRVVELLPDG-RLITLRHVLPGDYFG 52 (195)
T ss_dssp CCCEEEEEESCEEEEEECTTS-CEEEEEEECTTCEEC
T ss_pred CCeEEEEEeCEEEEEEECCCC-CEEEEEEecCCCEec
Confidence 367999999999998876543 233457889999884
No 200
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=78.50 E-value=5 Score=29.03 Aligned_cols=52 Identities=8% Similarity=0.011 Sum_probs=34.5
Q ss_pred EEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEE
Q 048039 81 MVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVF 135 (204)
Q Consensus 81 ~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~ 135 (204)
+....+.+|..+-.. ...+..+++|++|.+.+.. +.+| .......+.+||++
T Consensus 61 ~~~~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~~-~~~g-~~~~~~~~~~G~~f 112 (161)
T 3idb_B 61 MFEKLVKEGEHVIDQ-GDDGDNFYVIDRGTFDIYV-KCDG-VGRCVGNYDNRGSF 112 (161)
T ss_dssp CEEEEECTTCEEECT-TSCCCEEEEEEESEEEEEE-EETT-EEEEEEEEESCCEE
T ss_pred cceeEeCCCCEEEeC-CCCCcEEEEEEeCEEEEEE-cCCC-CeEEEEEcCCCCEe
Confidence 345677888764222 2234889999999999988 4432 22345678899966
No 201
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=78.43 E-value=4.6 Score=30.41 Aligned_cols=53 Identities=13% Similarity=0.034 Sum_probs=36.5
Q ss_pred EEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEE
Q 048039 81 MVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVF 135 (204)
Q Consensus 81 ~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~ 135 (204)
+....+.+|...-.---+ ...+++|++|.+.+...+++| .+.....+.+||++
T Consensus 62 ~~~~~~~~ge~i~~~G~~-~~~ly~I~~G~v~v~~~~~~g-~~~~~~~~~~G~~f 114 (187)
T 3gyd_A 62 MQCYAAPRDCQLLTEGDP-GDYLLLILTGEVNVIKDIPNK-GIQTIAKVGAGAII 114 (187)
T ss_dssp CEEEEECTTCEEECTTSC-CCEEEEEEEEEEEEEEEETTT-EEEEEEEEETTCEE
T ss_pred cEEEEeCCCCEEEcCCCC-CCeEEEEEeCEEEEEEECCCC-CeEEEEEccCCCee
Confidence 345677888764322222 478999999999998876552 22345678999987
No 202
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=78.21 E-value=4.5 Score=31.15 Aligned_cols=119 Identities=17% Similarity=0.111 Sum_probs=67.8
Q ss_pred EEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEEC-----CCCeEEEEeCCCCCEEE
Q 048039 81 MVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFP-----MGLLHYQRNVGKVNAVA 155 (204)
Q Consensus 81 ~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p-----~g~~H~~~N~g~~~a~~ 155 (204)
.....+++|...-..-.+ ...+++|++|.+.+...+.+| .+.....+.+||++-.. ....+.+.. .+++.+
T Consensus 33 ~~~~~~~~g~~i~~~g~~-~~~~y~v~~G~v~~~~~~~~g-~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A--~~~~~v 108 (232)
T 2gau_A 33 IQPFPCKKASTVFSEGDI-PNNLFYLYEGKIKILREGVYG-RFHISRIVKPGQFFGMRPYFAEETCSSTAIA--VENSKV 108 (232)
T ss_dssp CEEEEECTTCEEECTTCC-CCEEEEEEESCEEEEC------CCCEEEEECTTCEESHHHHHHTSCCSSEEEE--SSCEEE
T ss_pred CeEEEECCCCEEEeCCCC-CCeEEEEEeCEEEEEEECCCC-CEEEEEEeCCCCEeeeehhhCCCCcceEEEE--ecceEE
Confidence 345677888764322222 478999999999998765443 33356788999987321 122334444 355666
Q ss_pred EEEEc-------CCCCCcee----------------------------ccccc------cc-------CCCCCCHHHHHH
Q 048039 156 IAALN-------SQNPGTSS----------------------------IAPAL------FT-------SKPVLNDEIISK 187 (204)
Q Consensus 156 i~~~~-------s~~pg~~~----------------------------~~~~~------f~-------~~p~~~~~vl~~ 187 (204)
+.+-. .++|.... ++..+ ++ -.-.++.+-||.
T Consensus 109 ~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~t~~~lA~ 188 (232)
T 2gau_A 109 LAIPVEAIEALLKGNTSFCRYFLKALAKELGYAERRTVTLTQKHVRGRLAETLLILKENFGFENDGATLSIYLSREELAT 188 (232)
T ss_dssp EEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHCBCTTSSBBSCCCCHHHHHH
T ss_pred EEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCCCCcEEEcccCHHHHHH
Confidence 55432 12343210 00111 10 011488999999
Q ss_pred hcCCCHHHHHHHHhcC
Q 048039 188 TFLFDKKNVAILRSKF 203 (204)
Q Consensus 188 ~f~~~~~~v~~l~~~~ 203 (204)
.+|++++.+.++.+++
T Consensus 189 ~lg~sr~tvsR~l~~l 204 (232)
T 2gau_A 189 LSNMTVSNAIRTLSTF 204 (232)
T ss_dssp HTTSCHHHHHHHHHHH
T ss_pred HhCCCHHHHHHHHHHH
Confidence 9999999998887654
No 203
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=77.62 E-value=4.5 Score=31.36 Aligned_cols=119 Identities=8% Similarity=0.031 Sum_probs=70.2
Q ss_pred EEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEE----CCC--CeEEEEeCCCCCEE
Q 048039 81 MVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVF----PMG--LLHYQRNVGKVNAV 154 (204)
Q Consensus 81 ~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~----p~g--~~H~~~N~g~~~a~ 154 (204)
.....+++|...-.--.+ ...+++|++|.+.+...+.+| .+.....+.+||++-. ... ..+.+... +++.
T Consensus 43 ~~~~~~~~ge~i~~~G~~-~~~~y~i~~G~v~~~~~~~~G-~~~~l~~~~~G~~fG~~~~~~~~~~~~~~~~A~--~~~~ 118 (232)
T 1zyb_A 43 LHFIKHKAGETIIKSGNP-CTQLCFLLKGEISIVTNAKEN-IYTVIEQIEAPYLIEPQSLFGMNTNYASSYVAH--TEVH 118 (232)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEESEEEEEEECGGG-SCEEEEEEESSEEECGGGGSSSCCBCSSEEEES--SCEE
T ss_pred cEEEEECCCCEEECCCCc-ccEEEEEEeeEEEEEEECCCC-CEEEEEEccCCCeeeehHHhCCCCCCceEEEEc--cceE
Confidence 455677888764332222 478999999999998766543 3334567899998732 221 23344443 4556
Q ss_pred EEEEEc-------CCCCCcee----------------------------ccccccc--CCC------CCCHHHHHHhcCC
Q 048039 155 AIAALN-------SQNPGTSS----------------------------IAPALFT--SKP------VLNDEIISKTFLF 191 (204)
Q Consensus 155 ~i~~~~-------s~~pg~~~----------------------------~~~~~f~--~~p------~~~~~vl~~~f~~ 191 (204)
++.+-. .++|.+.. ++..+.. ..+ .++.+-||..+|+
T Consensus 119 v~~i~~~~~~~l~~~~p~~~~~l~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~t~~~lA~~lG~ 198 (232)
T 1zyb_A 119 TVCISKAFVLSDLFRYDIFRLNYMNIVSNRAQNLYSRLWDEPTLDLKSKIIRFFLSHCEKPQGEKTFKVKMDDLARCLDD 198 (232)
T ss_dssp EEEEEHHHHHHTGGGSHHHHHHHHHHHHHHHHHHHHHTTSCCCCSHHHHHHHHHHTTCSSSSSCEEEECCHHHHHHHHTS
T ss_pred EEEEEHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHhhcCCeEEecCCHHHHHHHhCC
Confidence 655432 23443210 0001100 011 3789999999999
Q ss_pred CHHHHHHHHhcC
Q 048039 192 DKKNVAILRSKF 203 (204)
Q Consensus 192 ~~~~v~~l~~~~ 203 (204)
+++.+.++.+++
T Consensus 199 sr~tvsR~l~~l 210 (232)
T 1zyb_A 199 TRLNISKTLNEL 210 (232)
T ss_dssp CHHHHHHHHHHH
T ss_pred ChhHHHHHHHHH
Confidence 999988887654
No 204
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=77.29 E-value=6.8 Score=30.61 Aligned_cols=117 Identities=17% Similarity=0.104 Sum_probs=70.9
Q ss_pred EEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEEC---CCC--e--EEEEeCCCCCE
Q 048039 81 MVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFP---MGL--L--HYQRNVGKVNA 153 (204)
Q Consensus 81 ~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p---~g~--~--H~~~N~g~~~a 153 (204)
+....+++|...-.---+ ...+++|++|.+.+...+.+| .+.....+.+||++-.. .+. . ..... -+++
T Consensus 43 ~~~~~~~~ge~i~~~G~~-~~~ly~v~~G~v~~~~~~~~G-~~~~l~~~~~g~~~G~~~~~~~~~~~~~~~~~A--~~~~ 118 (243)
T 3la7_A 43 PVVETFERNKTIFFPGDP-AERVYFLLKGAVKLSRVYEAG-EEITVALLRENSVFGVLSLLTGNKSDRFYHAVA--FTPV 118 (243)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEESCEEEEEECTTC-CEEEEEEECTTCEESCHHHHSSCCSBCCEEEEE--SSSE
T ss_pred heeEEECCCCEEEcCCCC-CceEEEEEeCEEEEEEECCCC-CEEEEEEecCCCEEcchHHhCCCCCcceEEEEE--ccce
Confidence 346778888865332222 478999999999999876653 33346778999987321 111 1 23333 3556
Q ss_pred EEEEEEc-------CCCCCcee----------------------------cccc----------------cccCCCCCCH
Q 048039 154 VAIAALN-------SQNPGTSS----------------------------IAPA----------------LFTSKPVLND 182 (204)
Q Consensus 154 ~~i~~~~-------s~~pg~~~----------------------------~~~~----------------~f~~~p~~~~ 182 (204)
.++.+=. .++|.+.. ++.. .+. -.++.
T Consensus 119 ~v~~i~~~~~~~l~~~~p~~~~~l~~~l~~~l~~~~~~~~~l~~~~~~~Rla~~L~~l~~~~g~~~~~~~~i~--~~lt~ 196 (243)
T 3la7_A 119 ELLSAPIEQVEQALKENPELSMLMLRGLSSRILQTEMMIETLAHRDMGSRLVSFLLILCRDFGVPCADGITID--LKLSH 196 (243)
T ss_dssp EEEEEEHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHEEECSSSEEEC--SCCCH
T ss_pred EEEEEcHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCCeEEe--ccCCH
Confidence 6665522 24454310 0000 111 14788
Q ss_pred HHHHHhcCCCHHHHHHHHhcC
Q 048039 183 EIISKTFLFDKKNVAILRSKF 203 (204)
Q Consensus 183 ~vl~~~f~~~~~~v~~l~~~~ 203 (204)
+-||..+|++++.+.++.+++
T Consensus 197 ~~lA~~lG~sr~tvsR~l~~L 217 (243)
T 3la7_A 197 QAIAEAIGSTRVTVTRLLGDL 217 (243)
T ss_dssp HHHHHHHTCCHHHHHHHHHHH
T ss_pred HHHHHHHCCcHHHHHHHHHHH
Confidence 999999999999998887654
No 205
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=77.28 E-value=6.1 Score=29.97 Aligned_cols=118 Identities=7% Similarity=0.021 Sum_probs=69.6
Q ss_pred EEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEE-----CCCCe--EEEEeCCCCCEE
Q 048039 82 VRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVF-----PMGLL--HYQRNVGKVNAV 154 (204)
Q Consensus 82 ~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~-----p~g~~--H~~~N~g~~~a~ 154 (204)
....+++|...-..-.+ ...+++|++|.+.+...+.+| .+.....+.+||++.+ -.+.+ +.... .+++.
T Consensus 27 ~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~G-~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~a--~~~~~ 102 (220)
T 3dv8_A 27 ITQHVKKGTIIHNGNMD-CTGLLLVKSGQLRTYILSDEG-REITLYRLFDMDMCLLSASCIMRSIQFEVTIEA--EKDTD 102 (220)
T ss_dssp EEEEECTTCEEEEGGGC-CCEEEEEEESCEEEEEECTTS-CEEEEEEECTTCEESGGGGGGCTTCCCCCEEEE--SSCEE
T ss_pred ceEEeCCCCEEECCCCC-cceEEEEEeceEEEEEECCCC-CEEEEEecCCCCeeehhHHHHhCCCCCceEEEE--eeeeE
Confidence 44677787764322222 478999999999999876653 2334577899999632 12222 33333 35666
Q ss_pred EEEEEc-------CCCCCceec----------------------------c------cccccC-CCCCCHHHHHHhcCCC
Q 048039 155 AIAALN-------SQNPGTSSI----------------------------A------PALFTS-KPVLNDEIISKTFLFD 192 (204)
Q Consensus 155 ~i~~~~-------s~~pg~~~~----------------------------~------~~~f~~-~p~~~~~vl~~~f~~~ 192 (204)
++.+-. ..+|.+... + ....+. .-.++.+-+|..+|++
T Consensus 103 ~~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~~~~~~~~~~~~~t~~~lA~~lg~s 182 (220)
T 3dv8_A 103 LWIIPAEIYKGIMKDSAPVANYTNELMATRFSDVMWLIEQIMWKSLDKRVASFLLEETSIEGTNELKITHETIANHLGSH 182 (220)
T ss_dssp EEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTSSEECCCHHHHHHHHTCC
T ss_pred EEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcCCceecCCHHHHHHHhCCC
Confidence 665532 124433100 0 000110 0138889999999999
Q ss_pred HHHHHHHHhcC
Q 048039 193 KKNVAILRSKF 203 (204)
Q Consensus 193 ~~~v~~l~~~~ 203 (204)
++.+.++.+++
T Consensus 183 r~tvsR~l~~L 193 (220)
T 3dv8_A 183 REVITRMLRYF 193 (220)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99998887654
No 206
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=76.33 E-value=5.9 Score=30.23 Aligned_cols=53 Identities=15% Similarity=0.207 Sum_probs=36.4
Q ss_pred EEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEE
Q 048039 81 MVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVF 135 (204)
Q Consensus 81 ~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~ 135 (204)
.....+++|...-..-.+ ...+++|++|.+.+...+.+| .+.....+.+||++
T Consensus 22 ~~~~~~~~g~~i~~~G~~-~~~~y~v~~G~v~~~~~~~~G-~~~~~~~~~~G~~~ 74 (213)
T 1o5l_A 22 GKVIVFRKGEIVKHQDDP-IEDVLILLEGTLKTEHVSENG-KTLEIDEIKPVQII 74 (213)
T ss_dssp SEEEEECTTCEEECTTCB-CCEEEEEEESCEEEEEECTTS-CEEEEEEECSSEES
T ss_pred cEEEEECCCCEEEcCCCc-cceEEEEEeeEEEEEEECCCC-CEEEEEEecCCCEe
Confidence 345677888765332222 378999999999998876543 23345678999987
No 207
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=74.76 E-value=7.3 Score=30.85 Aligned_cols=118 Identities=14% Similarity=0.125 Sum_probs=70.2
Q ss_pred EEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECC----C--CeEEEEeCCCCCEEE
Q 048039 82 VRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPM----G--LLHYQRNVGKVNAVA 155 (204)
Q Consensus 82 ~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~----g--~~H~~~N~g~~~a~~ 155 (204)
....+++|...-.---+ ...+++|++|.+.+...+.+| .+.....+.+||++-... . ....+.. -+++.+
T Consensus 70 ~~~~~~~ge~i~~~G~~-~~~~y~I~~G~v~~~~~~~~G-~e~~~~~~~~G~~~Ge~~~~~~~~~~~~~~~A--~~~~~l 145 (260)
T 3kcc_A 70 HIHKYPSKSTLIHQGEK-AETLYYIVKGSVAVLIKDEEG-KEMILSYLNQGDFIGELGLFEEGQERSAWVRA--KTACEV 145 (260)
T ss_dssp EEEEECTTCEEECTTCB-CCEEEEEEECEEEEEEECTTC-CEEEEEEEETTCEESCTTTTSTTCBCCSEEEE--SSCEEE
T ss_pred EEEEECCCCEEECCCCc-CCeEEEEEeCEEEEEEECCCC-CEEEEEEcCCCCEEeehHHhCCCCCCceEEEE--CCCeEE
Confidence 45678888764322222 478999999999998876553 333467789999884321 1 2223333 355666
Q ss_pred EEEEc-------CCCCCcee----------------------------cccccc--cCC-----------CCCCHHHHHH
Q 048039 156 IAALN-------SQNPGTSS----------------------------IAPALF--TSK-----------PVLNDEIISK 187 (204)
Q Consensus 156 i~~~~-------s~~pg~~~----------------------------~~~~~f--~~~-----------p~~~~~vl~~ 187 (204)
+.+-. ..+|.+.. ++..+. ... -.++.+-||.
T Consensus 146 ~~i~~~~~~~l~~~~p~l~~~l~~~l~~~l~~~~~~~~~l~~~~~~~Rla~~Ll~l~~~~~~~~~~~~~~l~lt~~~lA~ 225 (260)
T 3kcc_A 146 AEISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLLVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQ 225 (260)
T ss_dssp EEEEHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHTSTTCEEETTEEEEECCHHHHHH
T ss_pred EEEcHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCCceeecCCHHHHHH
Confidence 65432 23454311 000000 000 0378899999
Q ss_pred hcCCCHHHHHHHHhcC
Q 048039 188 TFLFDKKNVAILRSKF 203 (204)
Q Consensus 188 ~f~~~~~~v~~l~~~~ 203 (204)
.+|++++.+.++.+++
T Consensus 226 ~lG~sr~tvsR~l~~L 241 (260)
T 3kcc_A 226 IVGCSRETVGRILKML 241 (260)
T ss_dssp HHTCCHHHHHHHHHHH
T ss_pred HhCCCHHHHHHHHHHH
Confidence 9999999998887654
No 208
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=74.64 E-value=8.6 Score=30.04 Aligned_cols=118 Identities=12% Similarity=0.044 Sum_probs=69.9
Q ss_pred EEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEE--CCCCeEEEEeCCCCCEEEEEEE
Q 048039 82 VRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVF--PMGLLHYQRNVGKVNAVAIAAL 159 (204)
Q Consensus 82 ~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~--p~g~~H~~~N~g~~~a~~i~~~ 159 (204)
....+++|...-.--.+ ...+++|++|.+.+...+.+| .+.....+.+||++-. .....+.... -+++.++.+-
T Consensus 33 ~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~G-~~~~~~~~~~G~~~G~~l~~~~~~~~~A--~~~~~v~~i~ 108 (250)
T 3e6c_C 33 LIRDFAKGSAVIMPGEE-ITSMIFLVEGKIKLDIIFEDG-SEKLLYYAGGNSLIGKLYPTGNNIYATA--MEPTRTCWFS 108 (250)
T ss_dssp EEEEECTTCEEECTTCC-CCSEEEEEESCEEEEEECTTS-CEEEEEEECTTCEECCCSCCSCCEEEEE--SSSEEEEEEC
T ss_pred eEEEECCCCEEECCCCC-CCeEEEEEeeEEEEEEECCCC-CEEEEEEecCCCEEeeecCCCCceEEEE--cccEEEEEEc
Confidence 45677787764322222 377999999999998876653 3334567899998842 2223333433 3456665542
Q ss_pred c-------CCCCCcee----------------------------ccccc------ccC--------CCCCCHHHHHHhcC
Q 048039 160 N-------SQNPGTSS----------------------------IAPAL------FTS--------KPVLNDEIISKTFL 190 (204)
Q Consensus 160 ~-------s~~pg~~~----------------------------~~~~~------f~~--------~p~~~~~vl~~~f~ 190 (204)
. .++|.+.. ++..+ ++. ...++.+-+|..+|
T Consensus 109 ~~~~~~l~~~~p~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~i~~~~t~~~iA~~lG 188 (250)
T 3e6c_C 109 EKSLRTVFRTDEDMIFEIFKNYLTKVAYYARQVAEMNTYNPTIRILRLFYELCSSQGKRVGDTYEITMPLSQKSIGEITG 188 (250)
T ss_dssp HHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHCEEETTEEEEECCCCHHHHHHHHT
T ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCCcEecCCCCHHHHHHHhC
Confidence 1 13454310 00000 010 11488999999999
Q ss_pred CCHHHHHHHHhcC
Q 048039 191 FDKKNVAILRSKF 203 (204)
Q Consensus 191 ~~~~~v~~l~~~~ 203 (204)
++++.+.++.+++
T Consensus 189 ~sr~tvsR~l~~L 201 (250)
T 3e6c_C 189 VHHVTVSRVLASL 201 (250)
T ss_dssp CCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHH
Confidence 9999998887654
No 209
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=73.71 E-value=15 Score=30.66 Aligned_cols=67 Identities=10% Similarity=-0.042 Sum_probs=41.6
Q ss_pred EEECCCCCCCCccCCCCcEE-EEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEe-C-CCCCEEEEE
Q 048039 84 VDFAPDGLNPPHTHPRASEI-MTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRN-V-GKVNAVAIA 157 (204)
Q Consensus 84 ~~i~pg~~~ppH~H~~a~E~-~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N-~-g~~~a~~i~ 157 (204)
++|+.|....-.+-....|+ ++.+.|.+++.++ + +++.|..-|.+++|+|..-.... . +..++++..
T Consensus 62 l~L~~~~~~~~~~fl~~rE~~iV~lgG~~~V~vd-----g--~~f~lg~~dalYVp~G~~~v~~as~d~~~~a~fav 131 (289)
T 1ywk_A 62 LEIILDKELGVDYFLERRELGVINIGGPGFIEID-----G--AKETMKKQDGYYIGKETKHVRFSSENPDNPAKFYI 131 (289)
T ss_dssp EECCCSGGGTSSSTTTTEEEEEEECSSCEEEEET-----T--EEEEECTTCEEEECTTCCCEEEEESCTTSCCCEEE
T ss_pred EEcCCCceecccccCCCcEEEEEEccCeEEEEEC-----C--EEEecCCCCEEEeCCCCeEEEEEecCCCCCeEEEE
Confidence 45555544333322233666 4557799999885 4 57799999999999997644333 2 234555543
No 210
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=73.25 E-value=14 Score=28.14 Aligned_cols=115 Identities=13% Similarity=-0.000 Sum_probs=68.5
Q ss_pred EEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEEEEc-
Q 048039 82 VRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIAALN- 160 (204)
Q Consensus 82 ~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~~~~- 160 (204)
....+++|...-..-.+ ...+++|++|.+.+. .+.+| .+.....+.+||++- ....+..... +++.++.+-.
T Consensus 24 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~-~~~~G-~~~~~~~~~~G~~fG--~~~~~~~~A~--~~~~v~~i~~~ 96 (222)
T 1ft9_A 24 RSKIHAKGSLVCTGEGD-ENGVFVVVDGRLRVY-LVGEE-REISLFYLTSGDMFC--MHSGCLVEAT--ERTEVRFADIR 96 (222)
T ss_dssp EEEEECTTCEEECTTCC-CCCEEEEEESEEEEE-EEETT-EEEEEEEEETTCEEE--SCSSCEEEES--SCEEEEEECHH
T ss_pred cEEEECCCCEEECCCCC-CCeEEEEEecEEEEE-ECCCC-CEEEEEEcCCCCEec--CCCCEEEEEc--cceEEEEEeHH
Confidence 45677777764322222 377999999999996 44442 223456789999887 3334444443 5566665432
Q ss_pred ------CCCCCceec----------------------------c------cccccC--------CCCCCHHHHHHhcCCC
Q 048039 161 ------SQNPGTSSI----------------------------A------PALFTS--------KPVLNDEIISKTFLFD 192 (204)
Q Consensus 161 ------s~~pg~~~~----------------------------~------~~~f~~--------~p~~~~~vl~~~f~~~ 192 (204)
.++|..... + ..-++. .-.++.+-||..+|++
T Consensus 97 ~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~~t~~~lA~~lG~s 176 (222)
T 1ft9_A 97 TFEQKLQTCPSMAWGLIAILGRALTSCMRTIEDLMFHDIKQRIAGFFIDHANTTGRQTQGGVIVSVDFTVEEIANLIGSS 176 (222)
T ss_dssp HHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHTCBCCCSCC--CCCCEECCCHHHHHHHHCSC
T ss_pred HHHHHHHHChHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCcEEEeccCCHHHHHHHhCCc
Confidence 234543110 0 000110 0138899999999999
Q ss_pred HHHHHHHHhcC
Q 048039 193 KKNVAILRSKF 203 (204)
Q Consensus 193 ~~~v~~l~~~~ 203 (204)
++.+.++.+++
T Consensus 177 r~tvsR~l~~L 187 (222)
T 1ft9_A 177 RQTTSTALNSL 187 (222)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99998876654
No 211
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=72.67 E-value=2.9 Score=37.02 Aligned_cols=23 Identities=22% Similarity=0.102 Sum_probs=20.3
Q ss_pred eEEEeCCCcEEEECCCCeEEEEe
Q 048039 125 FSKILNKGDVFVFPMGLLHYQRN 147 (204)
Q Consensus 125 ~~~~L~~Gd~~~~p~g~~H~~~N 147 (204)
....|++||.+++|+|.+|.+..
T Consensus 266 N~v~L~pGea~flpAg~~HAYl~ 288 (440)
T 1pmi_A 266 NHVGLNKGEAMFLQAKDPHAYIS 288 (440)
T ss_dssp EEEEECTTCEEEECTTCCEEEEE
T ss_pred ceEecCCCCEEecCCCCccccCC
Confidence 46779999999999999999864
No 212
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=72.52 E-value=18 Score=27.36 Aligned_cols=113 Identities=15% Similarity=0.135 Sum_probs=69.0
Q ss_pred EEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEEEEc-
Q 048039 82 VRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIAALN- 160 (204)
Q Consensus 82 ~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~~~~- 160 (204)
....+++|...-.--.+ ...+++|++|.+.+. .+.+| .+.....+.+||++-. ...+.... .+++.++.+-.
T Consensus 28 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~-~~~~G-~~~~~~~~~~G~~~G~--~~~~~~~A--~~~~~v~~i~~~ 100 (220)
T 2fmy_A 28 REQRYSKKAILYTPNTE-RNLVFLVKSGRVRVY-LAYED-KEFTLAILEAGDIFCT--HTRAFIQA--MEDTTILYTDIR 100 (220)
T ss_dssp EEEEECTTCEEECTTCS-SCEEEEEEESEEEEE-EECSS-CEEEEEEEETTCEEES--CSSSEEEE--SSSEEEEEEEHH
T ss_pred heeEeCCCCEEECCCCC-CCeEEEEEecEEEEE-ECCCC-CEEEEEEcCCCCEeCC--ccceEEEE--cCcEEEEEEeHH
Confidence 45677787764322222 478999999999994 44442 3334578899998866 22334444 35566665432
Q ss_pred ------CCCCCceec-----------------------------------ccc---------cccCCCCCCHHHHHHhcC
Q 048039 161 ------SQNPGTSSI-----------------------------------APA---------LFTSKPVLNDEIISKTFL 190 (204)
Q Consensus 161 ------s~~pg~~~~-----------------------------------~~~---------~f~~~p~~~~~vl~~~f~ 190 (204)
.++|.+... +.. .+.- .++.+.||..+|
T Consensus 101 ~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~g~~~~~~~~~~~--~~t~~~lA~~lg 178 (220)
T 2fmy_A 101 NFQNIVVEFPAFSLNMVKVLGDLLKNSLTIINGLVFKDARLRLAEFLVQAAMDTGLKVPQGIKLEL--GLNTEEIALMLG 178 (220)
T ss_dssp HHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCEEETTEEEEEC--SSCHHHHHHHHT
T ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhCCCCCCcEEEec--cCCHHHHHHHhC
Confidence 235543100 000 0111 488999999999
Q ss_pred CCHHHHHHHHhcC
Q 048039 191 FDKKNVAILRSKF 203 (204)
Q Consensus 191 ~~~~~v~~l~~~~ 203 (204)
++++.+.++.+++
T Consensus 179 ~sr~tvsR~l~~l 191 (220)
T 2fmy_A 179 TTRQTVSVLLNDF 191 (220)
T ss_dssp SCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHH
Confidence 9999998887654
No 213
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=71.84 E-value=9.2 Score=27.39 Aligned_cols=48 Identities=15% Similarity=0.258 Sum_probs=34.0
Q ss_pred EEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEE
Q 048039 81 MVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVF 135 (204)
Q Consensus 81 ~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~ 135 (204)
+....+.+|..+-.--.+ ...+++|++|.+.+... ++ ....+.+||++
T Consensus 61 ~~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~-----~~-~~~~~~~G~~f 108 (154)
T 3pna_A 61 MFPVSFIAGETVIQQGDE-GDNFYVIDQGEMDVYVN-----NE-WATSVGEGGSF 108 (154)
T ss_dssp CEEEEECTTCEEECTTSC-CCEEEEEEESCEEEEET-----TE-EEEEECTTCEE
T ss_pred ceEEEECCCCEEEeCCCC-CCeEEEEEecEEEEEEC-----CE-EEEEecCCCEe
Confidence 345677888764322222 48899999999999863 33 56779999987
No 214
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=68.81 E-value=16 Score=25.36 Aligned_cols=47 Identities=19% Similarity=0.169 Sum_probs=32.5
Q ss_pred EEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEE
Q 048039 82 VRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVF 135 (204)
Q Consensus 82 ~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~ 135 (204)
....+.+|...-.--. ....+++|++|.+.+... ++ ....+.+||++
T Consensus 47 ~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~-----g~-~~~~~~~G~~f 93 (139)
T 3ocp_A 47 YPVEYGKDSCIIKEGD-VGSLVYVMEDGKVEVTKE-----GV-KLCTMGPGKVF 93 (139)
T ss_dssp EEEEECSSCEEECTTS-CCCEEEEEEECCEEEEET-----TE-EEEEECTTCEE
T ss_pred EEEecCCCCEEEeCCC-cCCEEEEEEeCEEEEEEC-----CE-EEEEeCCCCEe
Confidence 4567777775422222 348899999999999442 33 67888999987
No 215
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=68.63 E-value=12 Score=26.51 Aligned_cols=49 Identities=31% Similarity=0.273 Sum_probs=33.5
Q ss_pred EEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEE
Q 048039 82 VRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVF 137 (204)
Q Consensus 82 ~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~ 137 (204)
....+.+|...-.- ......+++|++|.+.+... + .....+.+||++-.
T Consensus 51 ~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~~-----~-~~~~~~~~G~~fG~ 99 (160)
T 4f8a_A 51 QTVHCAPGDLIYHA-GESVDSLCFVVSGSLEVIQD-----D-EVVAILGKGDVFGD 99 (160)
T ss_dssp EEEEECTTCEEECT-TSBCCEEEEEEESEEEEEET-----T-EEEEEEETTCEEEC
T ss_pred eeeeeCCCCEEEeC-CCCccEEEEEEeeEEEEEEC-----C-EEEEEecCCCEeCc
Confidence 34667777654222 12248899999999999762 2 26788999998843
No 216
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=67.45 E-value=14 Score=29.31 Aligned_cols=54 Identities=20% Similarity=0.175 Sum_probs=36.6
Q ss_pred EEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEE
Q 048039 81 MVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVF 135 (204)
Q Consensus 81 ~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~ 135 (204)
+....+.+|...-..-.+ +..+++|++|++.+.....++........+.+||++
T Consensus 180 ~~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~~~~~~~~~~l~~G~~f 233 (291)
T 2qcs_B 180 LEPVQFEDGQKIVVQGEP-GDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYF 233 (291)
T ss_dssp CEEEEECTTCEEECTTSC-CCEEEEEEEEEEEEEEECSTTSCEEEEEEECTTCEE
T ss_pred cEEEEECCCCEEEeCCcc-CCEEEEEEeCEEEEEEecCCCCccEEEEEeCCCCEe
Confidence 345677888765333233 478999999999998754432112356789999988
No 217
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=65.72 E-value=11 Score=28.23 Aligned_cols=49 Identities=12% Similarity=0.194 Sum_probs=34.6
Q ss_pred EEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEE
Q 048039 81 MVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVF 135 (204)
Q Consensus 81 ~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~ 135 (204)
+....+.||..+-..-.+ +..+++|++|++.+.. .+ ++ ....+.+||++
T Consensus 94 ~~~~~~~~ge~I~~~G~~-~~~ly~I~~G~v~~~~--~~--g~-~~~~l~~G~~f 142 (198)
T 2ptm_A 94 LEFEVFQPADYVIQEGTF-GDRMFFIQQGIVDIIM--SD--GV-IATSLSDGSYF 142 (198)
T ss_dssp CEEEEECTTCEEECTTSC-CSEEEEEEECCEEEEC--TT--SC-EEEEECTTCEE
T ss_pred ccceeeCCCCEEEECCCc-CcEEEEEEeCEEEEEe--cC--Ce-EEEEecCCCEe
Confidence 455677888764322222 4789999999999876 22 34 67889999987
No 218
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=65.22 E-value=14 Score=27.66 Aligned_cols=115 Identities=10% Similarity=0.083 Sum_probs=64.8
Q ss_pred EEECCCCCCCCccCCCC--cEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEE----CCCCeEEEEeCCCCCEEEEE
Q 048039 84 VDFAPDGLNPPHTHPRA--SEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVF----PMGLLHYQRNVGKVNAVAIA 157 (204)
Q Consensus 84 ~~i~pg~~~ppH~H~~a--~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~----p~g~~H~~~N~g~~~a~~i~ 157 (204)
..+++|...-.. .... ..+++|++|.+.+...+.+| .+.....+.+||++-. .....+.... -+++.++.
T Consensus 8 ~~~~~g~~i~~~-g~~~~~~~~y~v~~G~v~~~~~~~~G-~~~~~~~~~~g~~~G~~~l~~~~~~~~~~A--~~~~~v~~ 83 (202)
T 2zcw_A 8 VSFKAGDVILYP-GVPGPRDRAYRVLEGLVRLEAVDEEG-NALTLRLVRPGGFFGEEALFGQERIYFAEA--ATDVRLEP 83 (202)
T ss_dssp EEECTTCEEECS-BSCCTTCCCEEEEESCEEEEEECTTS-CEEEEEEECTTCEECTHHHHTCCBCSEEEE--SSCEEEEE
T ss_pred EEECCCCEEECC-CCCCCCCeEEEEEeCEEEEEEECCCC-cEEEEEEecCCCEeeehhcCCCCcceEEEE--cccEEEEE
Confidence 456666643221 1123 56899999999998876553 3334567899998743 1122333443 35566666
Q ss_pred EEcCC-CCCcee----------------------------ccccc------ccC-------CCCCCHHHHHHhcCCCHHH
Q 048039 158 ALNSQ-NPGTSS----------------------------IAPAL------FTS-------KPVLNDEIISKTFLFDKKN 195 (204)
Q Consensus 158 ~~~s~-~pg~~~----------------------------~~~~~------f~~-------~p~~~~~vl~~~f~~~~~~ 195 (204)
+ ... .|.+.. ++..+ ++. .-.++.+-||..+|++++.
T Consensus 84 i-~~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~t~~~lA~~lg~sr~t 162 (202)
T 2zcw_A 84 L-PENPDPELLKDLAQHLSQGLAEAYRRIERLATQRLKNRMAAALLELSETPLAHEEEGKVVLKATHDELAAAVGSVRET 162 (202)
T ss_dssp C-CSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHTTSTTEEEETTEEEEECCHHHHHHHHTCCHHH
T ss_pred E-hHhcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCcEEccCCCHHHHHHHhCCCHHH
Confidence 5 322 122200 00000 000 0137888999999999998
Q ss_pred HHHHHhcC
Q 048039 196 VAILRSKF 203 (204)
Q Consensus 196 v~~l~~~~ 203 (204)
+.++.+++
T Consensus 163 vsR~l~~L 170 (202)
T 2zcw_A 163 VTKVIGEL 170 (202)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88876653
No 219
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=64.91 E-value=13 Score=28.69 Aligned_cols=71 Identities=13% Similarity=0.022 Sum_probs=42.4
Q ss_pred EEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECC---CC----eEEEEeCCCCCEEEE
Q 048039 84 VDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPM---GL----LHYQRNVGKVNAVAI 156 (204)
Q Consensus 84 ~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~---g~----~H~~~N~g~~~a~~i 156 (204)
..+++|...-. -......+++|++|.+.+...+.+| .+.....+ +||++-... +. .+...... +++.++
T Consensus 21 ~~~~~ge~i~~-~G~~~~~~y~I~~G~v~~~~~~~~G-~e~~~~~~-~G~~~Ge~~~~~~~~~~~~~~~~a~~-~~~~v~ 96 (238)
T 2bgc_A 21 KQFHKKELIFN-QWDPQEYCIFLYDGITKLTSISENG-TIMNLQYY-KGAFVIMSGFIDTETSVGYYNLEVIS-EQATAY 96 (238)
T ss_dssp EEEETTCEEEC-TTCCCCEEEEEEESEEEEEEECTTS-CEEEEEEE-ESSEEEESBCTTTCCBSCCCEEEECS-SEEEEE
T ss_pred EEECCCCEEEe-CCCCCceEEEEEecEEEEEEECCCC-CEEEEEEc-CCCEecchhhhcCCCcCcceeEEEEE-cceEEE
Confidence 45667665422 1222478999999999998876553 22234556 999885432 22 35555443 566666
Q ss_pred EE
Q 048039 157 AA 158 (204)
Q Consensus 157 ~~ 158 (204)
.+
T Consensus 97 ~i 98 (238)
T 2bgc_A 97 VI 98 (238)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 220
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=64.25 E-value=8 Score=29.25 Aligned_cols=48 Identities=15% Similarity=0.125 Sum_probs=32.7
Q ss_pred EEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEE
Q 048039 81 MVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVF 135 (204)
Q Consensus 81 ~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~ 135 (204)
+....+.||..+-..-.+ ...+++|++|.+.+.. .+ + ....+.+||++
T Consensus 95 ~~~~~~~~ge~I~~~g~~-~~~ly~I~~G~v~v~~--~~--g--~~~~l~~G~~f 142 (202)
T 3bpz_A 95 LKFEVFQPGDYIIREGTI-GKKMYFIQHGVVSVLT--KG--N--KEMKLSDGSYF 142 (202)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEECEEEEEC--TT--S--CCEEEETTCEE
T ss_pred CCceEECCCCEEEECCCc-CCeEEEEeccEEEEEE--CC--C--eEEEEcCCCEe
Confidence 345677888765332223 4789999999999853 22 3 34579999987
No 221
>1znp_A Hypothetical protein ATU3615; NESG, ATR55, Q8U9W0, structural genomics, PSI, protein struc initiative; 2.50A {Agrobacterium tumefaciens str} SCOP: b.82.1.16
Probab=64.22 E-value=44 Score=25.18 Aligned_cols=103 Identities=13% Similarity=0.174 Sum_probs=65.5
Q ss_pred CCCCceEEEEeccccCCCCCceEEEEEEEECCCCCCCCccCCCCcEEEEEEeCc-EEEEEEecCCCCceeEEEeC----C
Q 048039 57 NPMGSKATPVYVQQIPGLNTLGLSMVRVDFAPDGLNPPHTHPRASEIMTLLEGT-LEVGFIGTAPDYRHFSKILN----K 131 (204)
Q Consensus 57 ~~~g~~~~~~~~~~~P~l~~~g~s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~-~~~~~~~~~~~~~~~~~~L~----~ 131 (204)
.|-|+..++.......+-.. -.+..+.-+.+|....+|.=.++.|+.+-..|. +++.+..++ +..+...|. +
T Consensus 19 HPEGG~yrEt~Rs~~~~~R~-~~TaIYfLL~~g~~S~wHRv~~sdEiW~~h~G~pL~l~~~~~d--g~~~~~~LG~d~~~ 95 (154)
T 1znp_A 19 HPEGGFYHQTFRDKAGGERG-HSTAIYYLLEKGVRSHWHRVTDAVEVWHYYAGAPIALHLSQDG--REVQTFTLGPAILE 95 (154)
T ss_dssp CTTSSEEEEEEECSSSTTTC-SCEEEEEEEESSCCEEEEEETTSCEEEEEEEESCEEEEEESSS--SCCEEEEESSCTTT
T ss_pred CCCCccEEEEEeCCCCCCCc-ceeEEEEEecCCCCCcceeccCCCEEEEeECCCCEEEEEEcCC--CcEEEEEeCCCccc
Confidence 46788787766554322221 234444556677766566532579999999998 888777665 445677774 4
Q ss_pred Cc--EEEECCCCeEEEEeCCCCCEEEEEEEcCCCCCc
Q 048039 132 GD--VFVFPMGLLHYQRNVGKVNAVAIAALNSQNPGT 166 (204)
Q Consensus 132 Gd--~~~~p~g~~H~~~N~g~~~a~~i~~~~s~~pg~ 166 (204)
|+ -+++|+|.....+..| .-.+++..- -||+
T Consensus 96 Ge~pQ~vVP~G~WqaA~~~g--~~~LVsCtV--aPGF 128 (154)
T 1znp_A 96 GERPQVIVPANCWQSAESLG--DFTLVGCTV--SPGF 128 (154)
T ss_dssp TEESEEEECTTCEEEEEESS--SEEEEEEEE--SSCC
T ss_pred CcccEEEEcCCEEEEeeECC--CeEEEEEEe--cCCC
Confidence 65 4789999998887653 445555533 3554
No 222
>1xsq_A Ureidoglycolate hydrolase; northeast structural genomics consortium, NESG, structural genomics, protein structure initiative, PSI, ET81, X-RAY; 1.60A {Escherichia coli} SCOP: b.82.1.14 PDB: 1xsr_A 1yqc_A
Probab=63.30 E-value=17 Score=27.81 Aligned_cols=65 Identities=12% Similarity=0.056 Sum_probs=46.7
Q ss_pred CccCCCCcEEEEEEeCcEEEEEEecCCC----CceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEEE
Q 048039 94 PHTHPRASEIMTLLEGTLEVGFIGTAPD----YRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIAA 158 (204)
Q Consensus 94 pH~H~~a~E~~yVl~G~~~~~~~~~~~~----~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~~ 158 (204)
+-+|+..+|.+.-+.|...+-++.+.++ ++.+.+...+|+.+.+-+|+-|.-.-.-.++..++.+
T Consensus 71 lERHp~~sQafiPl~~~~~lVvVA~~~~~Pd~~~lrAF~~~ggqgV~y~~GtWH~pl~~l~~~~~F~vv 139 (168)
T 1xsq_A 71 LERHPLGTQAFIPMKGEVFVVVVALGDDKPDLSTLRAFITNGEQGVNYHRNVWHHPLFAWQRVTDFLTI 139 (168)
T ss_dssp EEECTTBCEEEEESBCCCCEEEEEECSSSCEEEEEEEEECCSSCEEEECTTCEECCCCBSSSCEEEEEE
T ss_pred EeeCCCCceEEEECCCCEEEEEEeCCCCCCChhheEEEEecCCeEEEeCCCceecccccCCCcceEEEE
Confidence 4478888999999999866555444321 2457899999999999999999854433455666644
No 223
>2bdr_A Ureidoglycolate hydrolase; all beta protein, structural genomics, PSI, protein structur initiative, northeast structural genomics consortium; 1.60A {Pseudomonas putida} SCOP: b.82.1.14
Probab=63.08 E-value=24 Score=27.12 Aligned_cols=66 Identities=14% Similarity=-0.017 Sum_probs=47.1
Q ss_pred CCccCCCCcEEEEEEeCcEEEEEEecCCC----CceeEEEeCCCcEEEECCCCeEEEEeCCCCCEEEEEE
Q 048039 93 PPHTHPRASEIMTLLEGTLEVGFIGTAPD----YRHFSKILNKGDVFVFPMGLLHYQRNVGKVNAVAIAA 158 (204)
Q Consensus 93 ppH~H~~a~E~~yVl~G~~~~~~~~~~~~----~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i~~ 158 (204)
.+-+|+..+|.+.-+.|...+-++.+.++ ++.+.+...+|+.+.+-+|+-|.-.-.-+++..++.+
T Consensus 72 ~lERHp~~sQafiPl~~~~~lVvVAp~~~~Pd~~~lrAF~~~ggqgV~y~~GtWH~pl~~l~~~~dF~vv 141 (175)
T 2bdr_A 72 MLERHPLGSQAFIPLLGNPFLIVVAPVGDAPVSGLVRAFRSNGRQGVNYHRGVWHHPVLTIEKRDDFLVV 141 (175)
T ss_dssp EEEECTTBCEEEEESSCCCEEEEEECSSSSCCGGGCEEEEECSSCEEEECTTCEECSCEESSSEEEEEEE
T ss_pred EEeeCCCCceEEEECCCCEEEEEEeCCCCCCCccceEEEEeCCCeEEEeCCCceecccccCCCCceEEEE
Confidence 34578888999999999865555544421 2468999999999999999999643333345555544
No 224
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=62.92 E-value=17 Score=29.67 Aligned_cols=51 Identities=16% Similarity=0.149 Sum_probs=35.4
Q ss_pred EEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEE
Q 048039 82 VRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVF 135 (204)
Q Consensus 82 ~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~ 135 (204)
....+++|..+-.--.+ ...+++|++|.+.+...+.+ ++.....+.+||++
T Consensus 37 ~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~~~~--g~~~~~~~~~G~~f 87 (333)
T 4ava_A 37 QPLRAAAGQVLLRQGEP-AVSFLLISSGSAEVSHVGDD--GVAIIARALPGMIV 87 (333)
T ss_dssp EEEEECTTCEEECTTSB-CCCEEEEEECCEEEEEECTT--CCEEEEEECTTCEE
T ss_pred eEEEECCCCEEEeCCCc-CCEEEEEEeeEEEEEEECCC--CcEEEEEecCCCEe
Confidence 45667777753222122 37799999999999887655 33356788999987
No 225
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=62.69 E-value=8.6 Score=32.78 Aligned_cols=27 Identities=19% Similarity=0.406 Sum_probs=23.9
Q ss_pred eEEEeCCCcEEEECCCCeEEEEeCCCC
Q 048039 125 FSKILNKGDVFVFPMGLLHYQRNVGKV 151 (204)
Q Consensus 125 ~~~~L~~Gd~~~~p~g~~H~~~N~g~~ 151 (204)
...+=++||.+++++|..|+..|.|-.
T Consensus 279 yr~~QkpGd~Vi~~PgayH~v~n~G~~ 305 (332)
T 2xxz_A 279 YRFVQRPGDLVWINAGTVHWVQATGWC 305 (332)
T ss_dssp EEEEECTTCEEEECTTCEEEEEESSSE
T ss_pred EEEEECCCCEEEECCCceEEEEeccee
Confidence 467779999999999999999999863
No 226
>3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B
Probab=61.84 E-value=14 Score=27.98 Aligned_cols=49 Identities=22% Similarity=0.177 Sum_probs=34.8
Q ss_pred EEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEE
Q 048039 81 MVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFV 136 (204)
Q Consensus 81 ~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~ 136 (204)
+....+.||..+-.---+ ...+++|++|++.+... + .....+.+||++=
T Consensus 98 ~~~~~~~~ge~I~~~G~~-~~~ly~I~~G~v~v~~~-----~-~~~~~l~~G~~fG 146 (212)
T 3ukn_A 98 IKTSFCAPGEFLIRQGDA-LQAIYFVCSGSMEVLKD-----N-TVLAILGKGDLIG 146 (212)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEECCEEEESS-----S-CEEEEECTTCEEE
T ss_pred hheEEeCCCCEEEECCCc-ccEEEEEEecEEEEEEC-----C-eEEEEecCCCCcC
Confidence 445677888764322222 48999999999998752 3 2678899999884
No 227
>1yll_A PA5104, conserved hypothetical protein; structural genomics, beta-BA PSI, protein structure initiative, midwest center for struc genomics; 1.64A {Pseudomonas aeruginosa} SCOP: b.82.1.17
Probab=59.84 E-value=18 Score=28.40 Aligned_cols=34 Identities=6% Similarity=-0.058 Sum_probs=27.6
Q ss_pred cEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCC
Q 048039 101 SEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMG 140 (204)
Q Consensus 101 ~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g 140 (204)
.-++|+++|++.+... +. ....|.+||.+.+-..
T Consensus 141 ~~~v~~l~G~~~v~~~-----~~-~~~~L~~~d~l~~~~~ 174 (200)
T 1yll_A 141 TLLLFAQQDGVAISLQ-----GQ-PRGQLAAHDCLCAEGL 174 (200)
T ss_dssp EEEEEESSSCEEEEET-----TE-EEEEECTTCEEEEESC
T ss_pred EEEEEEccCcEEEEcC-----CC-ceeecCCCCEEEEeCC
Confidence 6799999999998763 22 6899999999998654
No 228
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=58.98 E-value=11 Score=28.95 Aligned_cols=47 Identities=9% Similarity=0.003 Sum_probs=33.3
Q ss_pred EEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEE
Q 048039 82 VRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVF 135 (204)
Q Consensus 82 ~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~ 135 (204)
....+++|...-.--.+ +..+++|++|.+.+... ++ ....+.+||++
T Consensus 31 ~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~v~~~-----~~-~~~~~~~g~~f 77 (246)
T 3of1_A 31 EEKSVPKGATIIKQGDQ-GDYFYVVEKGTVDFYVN-----DN-KVNSSGPGSSF 77 (246)
T ss_dssp EEEEECTTCEEECTTCC-CCEEEEEEECCEEEEST-----TS-CCEEECTTCEE
T ss_pred ceEEECCCCEEEecCCC-CCEEEEEEeeEEEEEEC-----CE-EEEecCCCCee
Confidence 45667777754322233 48999999999998763 23 46889999988
No 229
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=58.88 E-value=4.3 Score=31.04 Aligned_cols=118 Identities=11% Similarity=0.123 Sum_probs=67.7
Q ss_pred EEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECC---CCe---EEEEeCCCCCEEE
Q 048039 82 VRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPM---GLL---HYQRNVGKVNAVA 155 (204)
Q Consensus 82 ~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~---g~~---H~~~N~g~~~a~~ 155 (204)
....+++|...-..-.+ ...+++|++|.+.+...+.+| .+.....+.+||++-... +.+ +..... +++.+
T Consensus 33 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~~~~G-~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a~--~~~~v 108 (227)
T 3dkw_A 33 DLVNLDKGAYVFRQGEP-AHAFYYLISGCVKIYRLTPEG-QEKILEVTNERNTFAEAMMFMDTPNYVATAQAV--VPSQL 108 (227)
T ss_dssp EEEECCTTEEEECTTSB-CCEEEEEEESCEECCBCCGGG-CCBCCCEECTTEEESCTTTTTTCSBCSSCEEES--SCCEE
T ss_pred EEEEECCCCEEEcCCCc-cceEEEEEeCEEEEEEECCCC-CEEEEEEcCCCCEeeeHHhcCCCCCCceEEEEc--CcEEE
Confidence 34566777654322222 378999999999998765543 233456788999874322 222 233332 44555
Q ss_pred EEEEc-------CCCCCceec----------------------------cccc---cc--------CCCCCCHHHHHHhc
Q 048039 156 IAALN-------SQNPGTSSI----------------------------APAL---FT--------SKPVLNDEIISKTF 189 (204)
Q Consensus 156 i~~~~-------s~~pg~~~~----------------------------~~~~---f~--------~~p~~~~~vl~~~f 189 (204)
+.+-. ..+|.+... +..+ .. -.-.++.+-+|..+
T Consensus 109 ~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~~~~~~~~~~~~~~~~~t~~~lA~~l 188 (227)
T 3dkw_A 109 FRFSNKAYLRQLQDNTPLALALLAKLSTRLHQRIDEIETLSLKNATHRVVRYLLTLAAHAPGENCRVEIPVAKQLVAGHL 188 (227)
T ss_dssp EEEESHHHHHHHSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSSSCCCCCCCSCTHHHHHHT
T ss_pred EEEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcCCCCeEEEecCCHHHHHHHh
Confidence 54422 245544110 0000 00 01147889999999
Q ss_pred CCCHHHHHHHHhcC
Q 048039 190 LFDKKNVAILRSKF 203 (204)
Q Consensus 190 ~~~~~~v~~l~~~~ 203 (204)
|++++.+.++.+++
T Consensus 189 g~sr~tvsR~l~~l 202 (227)
T 3dkw_A 189 SIQPETFSRIMHRL 202 (227)
T ss_dssp TSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 99999998887654
No 230
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=57.70 E-value=18 Score=28.61 Aligned_cols=48 Identities=15% Similarity=0.258 Sum_probs=34.7
Q ss_pred EEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEE
Q 048039 81 MVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVF 135 (204)
Q Consensus 81 ~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~ 135 (204)
+....+++|..+-..-.+ ...+++|++|++.+... ++ ....+.+||++
T Consensus 62 ~~~~~~~~g~~i~~~G~~-~~~~y~i~~G~v~~~~~-----g~-~~~~l~~G~~f 109 (291)
T 2qcs_B 62 MFPVSFIAGETVIQQGDE-GDNFYVIDQGEMDVYVN-----NE-WATSVGEGGSF 109 (291)
T ss_dssp CEEEEECTTCEEECTTSB-CCEEEEEEECCEEEEET-----TE-EEEEECTTCEE
T ss_pred ccEEEECCCCEEEeCCCC-CceEEEEeeeEEEEEEC-----Ce-EEEEcCCCCcc
Confidence 345677888765333233 48899999999999872 33 67889999987
No 231
>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A
Probab=57.34 E-value=12 Score=25.96 Aligned_cols=45 Identities=16% Similarity=0.208 Sum_probs=31.0
Q ss_pred EEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEE
Q 048039 82 VRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVF 135 (204)
Q Consensus 82 ~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~ 135 (204)
....+++|...-..-.+ ...+++|++|.+.+... + ...+.+||++
T Consensus 35 ~~~~~~~g~~i~~~g~~-~~~~y~i~~G~v~~~~~-----~---~~~~~~G~~~ 79 (138)
T 1vp6_A 35 RARTVPAGAVICRIGEP-GDRMFFVVEGSVSVATP-----N---PVELGPGAFF 79 (138)
T ss_dssp EEEEECTTCEEECTTSC-CCEEEEEEESCEEECSS-----S---CEEECTTCEE
T ss_pred cEEEeCCCCEEEeCCCC-cceEEEEEeeEEEEEeC-----C---cceECCCCEe
Confidence 45677888764332223 47899999999998653 2 3578888876
No 232
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=56.93 E-value=10 Score=26.36 Aligned_cols=48 Identities=17% Similarity=0.208 Sum_probs=31.6
Q ss_pred EEEEEEC-CCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEE
Q 048039 81 MVRVDFA-PDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVF 135 (204)
Q Consensus 81 ~~~~~i~-pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~ 135 (204)
+....+. +|..+-. .......+++|++|.+.+.. .+ ++ ...+.+||++
T Consensus 39 ~~~~~~~~~g~~i~~-~g~~~~~~y~i~~G~v~~~~--~~--g~--~~~l~~G~~f 87 (134)
T 2d93_A 39 MIFEVVEQAGAIILE-DGQELDSWYVILNGTVEISH--PD--GK--VENLFMGNSF 87 (134)
T ss_dssp EEEEEECSSSCEEEC-TTCEECEEEECCBSCEEEEC--SS--SC--EEEECTTCEE
T ss_pred heEEEecCCCCEEEe-CCCCCCeEEEEEeCEEEEEc--CC--Cc--EEEecCCCcc
Confidence 3456677 7765422 22234679999999999874 22 43 4779999977
No 233
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=54.33 E-value=20 Score=28.59 Aligned_cols=52 Identities=17% Similarity=0.224 Sum_probs=35.2
Q ss_pred EEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEe-cCCCCceeEEEeCCCcEE
Q 048039 82 VRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIG-TAPDYRHFSKILNKGDVF 135 (204)
Q Consensus 82 ~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~-~~~~~~~~~~~L~~Gd~~ 135 (204)
....+.+|..+-.--- .+..+++|++|++.+...+ .+| .......+.+||++
T Consensus 181 ~~~~~~~g~~I~~~G~-~~~~~yiI~~G~v~~~~~~~~~g-~~~~~~~l~~G~~f 233 (299)
T 3shr_A 181 EETHYENGEYIIRQGA-RGDTFFIISKGKVNVTREDSPNE-DPVFLRTLGKGDWF 233 (299)
T ss_dssp EEEEECTTCEEECTTC-EECEEEEEEESEEEEEECCSSSC-CCEEEEEEETTCEE
T ss_pred cEEEECCCCEEEeCCC-CCCEEEEEEeeEEEEEEecCCCC-cceEEEEcCCCCEe
Confidence 4566777775422222 2478999999999998865 232 23356789999988
No 234
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=54.30 E-value=28 Score=29.90 Aligned_cols=52 Identities=8% Similarity=0.011 Sum_probs=35.8
Q ss_pred EEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEE
Q 048039 81 MVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVF 135 (204)
Q Consensus 81 ~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~ 135 (204)
+....+.+|..+-..-.. ...+++|++|.+.+... .+| .......+.+||+|
T Consensus 168 ~~~~~~~~Ge~I~~qGd~-~d~~YiI~sG~v~v~~~-~~G-~~~~v~~l~~G~~f 219 (416)
T 3tnp_B 168 MFEKLVKEGEHVIDQGDD-GDNFYVIDRGTFDIYVK-CDG-VGRCVGNYDNRGSF 219 (416)
T ss_dssp CEEEEECTTCEEECTTSC-CCEEEEEEECEEEEEEE-CSS-CEEEEEEEESCCEE
T ss_pred cEEEEeCCCCEEEeCCCC-CceEEEEEeeEEEEEEe-cCC-CEEEEEEecCCCEE
Confidence 455678888765333333 38899999999999873 332 23346778999977
No 235
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=52.81 E-value=28 Score=27.76 Aligned_cols=49 Identities=20% Similarity=0.171 Sum_probs=34.8
Q ss_pred EEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEE
Q 048039 81 MVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFV 136 (204)
Q Consensus 81 ~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~ 136 (204)
+....+.+|..+-..-.+ +..+++|++|.+.+... ++ ....+.+||++-
T Consensus 62 ~~~~~~~~g~~i~~~G~~-~~~~yiI~~G~v~v~~~-----g~-~~~~~~~G~~fG 110 (299)
T 3shr_A 62 MYPVEYGKDSCIIKEGDV-GSLVYVMEDGKVEVTKE-----GV-KLCTMGPGKVFG 110 (299)
T ss_dssp CEEEEECTTCEEECTTCB-CCCEEEEEESCEEEEET-----TE-EEEEECTTCEES
T ss_pred cCeEEECCCCEEEcCCCc-CceEEEEEEEEEEEEEC-----CE-EEEEeCCCCeee
Confidence 445778888765333333 37899999999998542 33 678899999873
No 236
>1s4c_A Protein HI0227; double-stranded beta-helix, structural genomics, unknown function, structural genomics, unknown function; 2.20A {Haemophilus influenzae} SCOP: b.82.2.7 PDB: 1jop_A
Probab=52.54 E-value=44 Score=24.68 Aligned_cols=56 Identities=20% Similarity=0.173 Sum_probs=40.3
Q ss_pred CCCccCCCCcEEEEEEeCcEEEEEEecCC------------------CC-ceeEEEeCCCcEEEECCCCeEEEEe
Q 048039 92 NPPHTHPRASEIMTLLEGTLEVGFIGTAP------------------DY-RHFSKILNKGDVFVFPMGLLHYQRN 147 (204)
Q Consensus 92 ~ppH~H~~a~E~~yVl~G~~~~~~~~~~~------------------~~-~~~~~~L~~Gd~~~~p~g~~H~~~N 147 (204)
..+-.|.+-..+-|+++|+=++++....+ ++ ......|++|+.++|-++.+|.-..
T Consensus 60 ~~~E~Hr~YiDIq~~l~G~E~i~~~~~~~~~~~~~~y~~e~D~~~~~~~~~~~~v~l~~G~FaiFfP~d~H~p~~ 134 (155)
T 1s4c_A 60 KKAELHHEYLDVQVLIRGTENIEVGATYPNLSKYEDYNEADDYQLCADIDDKFTVTMKPKMFAVFYPYEPHKPCC 134 (155)
T ss_dssp SCEEECSSEEEEEEEEESCEEEEECCSCCCGGGSCCCBTTTTBEEESCCTTCEEEEECTTEEEEECTTCCEEEEE
T ss_pred cccccccceEEEEecceeeEEEEEEecccCcccCCCCCcCCCEEecCCCCccEEEEeCCCEEEEECCCccccccc
Confidence 35556776789999999988887764210 01 1135788999999999999998644
No 237
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=50.33 E-value=32 Score=29.39 Aligned_cols=56 Identities=14% Similarity=0.014 Sum_probs=37.5
Q ss_pred EEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCC-ceeEEEeCCCcEEEE
Q 048039 81 MVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDY-RHFSKILNKGDVFVF 137 (204)
Q Consensus 81 ~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~-~~~~~~L~~Gd~~~~ 137 (204)
+....+++|..+-.- ......+++|++|.+.+...+.+|.. ......+.+||++-.
T Consensus 65 ~~~~~~~~g~~i~~~-Gd~~~~~y~i~~G~v~v~~~~~~g~~~~~~~~~~~~G~~fGe 121 (469)
T 1o7f_A 65 GYYENLEKGITLFRQ-GDIGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFGE 121 (469)
T ss_dssp CEEEEECTTCEEECT-TSBCCEEEEEEESCEEEEECSSSCGGGCEEEEEECTTCEECG
T ss_pred ceEEEECCCCEEEeC-CCCCCcEEEEEeeEEEEEEecCCCCCcceEEEEccCCCCcch
Confidence 345677888754222 22247899999999999886554210 146788999998843
No 238
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=49.80 E-value=17 Score=32.87 Aligned_cols=27 Identities=22% Similarity=0.455 Sum_probs=24.0
Q ss_pred eEEEeCCCcEEEECCCCeEEEEeCCCC
Q 048039 125 FSKILNKGDVFVFPMGLLHYQRNVGKV 151 (204)
Q Consensus 125 ~~~~L~~Gd~~~~p~g~~H~~~N~g~~ 151 (204)
...+=++||.+++++|..|+..|.|-.
T Consensus 338 yr~vQkpGd~Vi~~PgayH~v~n~G~~ 364 (531)
T 3avr_A 338 YRFIQRPGDLVWINAGTVHWVQAIGWC 364 (531)
T ss_dssp EEEEECTTCEEEECTTCEEEEEESSSE
T ss_pred EEEEECCCCEEEECCCceEEEEeccee
Confidence 467779999999999999999999863
No 239
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=49.62 E-value=37 Score=28.20 Aligned_cols=50 Identities=10% Similarity=-0.033 Sum_probs=34.9
Q ss_pred cEE-EEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEEEEe-C-CCCCEEEEE
Q 048039 101 SEI-MTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHYQRN-V-GKVNAVAIA 157 (204)
Q Consensus 101 ~E~-~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~~~N-~-g~~~a~~i~ 157 (204)
.|+ ++.+.|.+++.+. + +++.|..-|.+++|+|....... . ...++++..
T Consensus 79 rE~~iV~l~G~~~V~vd-----G--~~f~lg~~dalYVp~g~~~v~~as~da~~~a~fav 131 (282)
T 1xru_A 79 RELGVINIGGAGTITVD-----G--QCYEIGHRDALYVGKGAKEVVFASIDTGTPAKFYY 131 (282)
T ss_dssp EEEEEEECSSCEEEEET-----T--EEEEECTTCEEEECTTCCCEEEEESCTTSCCCEEE
T ss_pred cEEEEEEccCeEEEEEC-----C--EEEecCCCCEEEeCCCCeEEEEEecCCCCCeEEEE
Confidence 666 5567899999885 4 57799999999999998644333 2 234555543
No 240
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=49.21 E-value=30 Score=26.27 Aligned_cols=48 Identities=15% Similarity=0.134 Sum_probs=33.0
Q ss_pred EEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEE
Q 048039 82 VRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVF 135 (204)
Q Consensus 82 ~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~ 135 (204)
....+.+|...-..--+ +..+++|++|++.+...+ .. ....+.+||.+
T Consensus 149 ~~~~~~~g~~i~~~g~~-~~~~y~I~~G~v~v~~~~----~~-~~~~l~~g~~f 196 (246)
T 3of1_A 149 DTKIYQPGETIIREGDQ-GENFYLIEYGAVDVSKKG----QG-VINKLKDHDYF 196 (246)
T ss_dssp EEEEECTTCEEECTTSB-CCEEEEEEECEEEEEETT----TE-EEEEEETTCEE
T ss_pred heEEeCCCCEEEeCCCc-CCEEEEEEecEEEEEEcC----Cc-eEEEcCCCCcc
Confidence 45667777754322222 488999999999987642 11 56788999977
No 241
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=47.63 E-value=20 Score=32.24 Aligned_cols=80 Identities=19% Similarity=0.219 Sum_probs=49.5
Q ss_pred ccccCCCCCceEEEEEEEECCCCCCCCccCC-CCcEEEEEEeCcEEEEEEecCC--------------------------
Q 048039 68 VQQIPGLNTLGLSMVRVDFAPDGLNPPHTHP-RASEIMTLLEGTLEVGFIGTAP-------------------------- 120 (204)
Q Consensus 68 ~~~~P~l~~~g~s~~~~~i~pg~~~ppH~H~-~a~E~~yVl~G~~~~~~~~~~~-------------------------- 120 (204)
...+||+++--+.+ -.+|...++|.-. .-.-+-|-+-|.-.+++.-+..
T Consensus 228 ~~~I~GVNtpqLYi----gm~gS~t~wH~Ed~~l~SINynhggg~c~WY~VP~e~~~k~e~l~~k~~~d~l~~~~~pspe 303 (510)
T 4ask_A 228 GHTILGMNTVQLYM----KVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYWETISAFCDRHGVDYLTGSWWPILD 303 (510)
T ss_dssp SSCCTTTTSCEEEE----ECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHHHHTTCCTTTSCBCCCHH
T ss_pred CCcCCCcChhheEE----ccccccccceecCCcceeEEEeecCCceeEEEECHHHHHHHHHHHHHhCcchhhccccCCHH
Confidence 35677777543222 3577778888632 1244555555554444433220
Q ss_pred -----CCceeEEEeCCCcEEEECCCCeEEEEeCCCC
Q 048039 121 -----DYRHFSKILNKGDVFVFPMGLLHYQRNVGKV 151 (204)
Q Consensus 121 -----~~~~~~~~L~~Gd~~~~p~g~~H~~~N~g~~ 151 (204)
+=.+...+=++||.+++++|..|+..|.|-.
T Consensus 304 ~L~kagIPvyr~iQkPGdfVit~PgtyH~Vqs~Gf~ 339 (510)
T 4ask_A 304 DLYASNIPVYRFVQRPGDLVWINAGTVHWVQATGWC 339 (510)
T ss_dssp HHHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSE
T ss_pred HHHhCCCCeEEEEECCCCEEEECCCceEEEEecCee
Confidence 0022467779999999999999999999863
No 242
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=46.04 E-value=39 Score=28.43 Aligned_cols=51 Identities=20% Similarity=0.153 Sum_probs=33.3
Q ss_pred EEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEE
Q 048039 84 VDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVF 135 (204)
Q Consensus 84 ~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~ 135 (204)
..+.+|..+-.--.+ +..+++|++|++.+.....+++.......+.+||.|
T Consensus 274 ~~~~~ge~I~~eGd~-~~~~yiI~~G~v~v~~~~~~~~~~~~v~~l~~Gd~f 324 (381)
T 4din_B 274 VQFEDGEKIVVQGEP-GDDFYIITEGTASVLQRRSPNEEYVEVGRLGPSDYF 324 (381)
T ss_dssp CCBCSSCBSSCTTSB-CCEEEEEEESCEEEECCSSSSSCCCEEEEECTTCEE
T ss_pred ccCCCCCEEEeCCCc-CCEEEEEEeCEEEEEEecCCCCceEEEEEeCCCCEe
Confidence 455666654322223 488999999999998765432112346789999987
No 243
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=37.93 E-value=25 Score=29.63 Aligned_cols=48 Identities=13% Similarity=0.168 Sum_probs=35.5
Q ss_pred EEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEE
Q 048039 81 MVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVF 135 (204)
Q Consensus 81 ~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~ 135 (204)
+....+.+|..+-..-.+ +..+++|++|++.+... ++ ....+.+||+|
T Consensus 153 ~~~~~~~~ge~I~~~Gd~-~~~~yiI~~G~v~v~~~-----~~-~v~~l~~G~~f 200 (381)
T 4din_B 153 MFPVTHIAGETVIQQGNE-GDNFYVVDQGEVDVYVN-----GE-WVTNISEGGSF 200 (381)
T ss_dssp CEEEECCTTCBSSCTTSB-CCEEEECSSSEEEEEET-----TE-EEEEEESSCCB
T ss_pred ceEEEECCCCEEEeCCCC-CCeEEEEEeeEEEEEEC-----Ce-EeeeCCCCCEE
Confidence 456778888865444344 48899999999999863 33 56789999986
No 244
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=37.28 E-value=38 Score=27.24 Aligned_cols=75 Identities=21% Similarity=0.197 Sum_probs=44.5
Q ss_pred EEEEEEECCCCCCCCccCCC------------CcEEEEEEe------CcEEEEEEecCCCCceeEEEeCCCcEEEECCCC
Q 048039 80 SMVRVDFAPDGLNPPHTHPR------------ASEIMTLLE------GTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGL 141 (204)
Q Consensus 80 s~~~~~i~pg~~~ppH~H~~------------a~E~~yVl~------G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~ 141 (204)
.+....+.+|+...+|.-.. .+=++|.-+ |++.+.-. ........++|++++||.+.
T Consensus 100 ~~~~~rY~~G~~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~-----~~~~~V~P~~G~~v~F~s~~ 174 (243)
T 3dkq_A 100 PPLFNRYQGGETFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDT-----YGQQSIKLSAGSLVLYPSSS 174 (243)
T ss_dssp EEEEEEECTTCEEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEET-----TEEEEECCCTTCEEEEETTS
T ss_pred cceEEEECCCCeeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeC-----CCcEEEecCCCEEEEECCCC
Confidence 35567889999888886421 112233322 44444321 11246778999999999999
Q ss_pred eEEEEeC--CCCCEEEEEEE
Q 048039 142 LHYQRNV--GKVNAVAIAAL 159 (204)
Q Consensus 142 ~H~~~N~--g~~~a~~i~~~ 159 (204)
.|...-+ |..-+...++-
T Consensus 175 lH~v~pV~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 175 LHQVTPVLSGERTAAFMWLQ 194 (243)
T ss_dssp EEEECCEEEECEEEEEEEEE
T ss_pred eEcCccccccCEEEEEEehh
Confidence 9997543 44444444443
No 245
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=36.61 E-value=58 Score=27.74 Aligned_cols=46 Identities=15% Similarity=0.160 Sum_probs=32.8
Q ss_pred EEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEE
Q 048039 84 VDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVF 135 (204)
Q Consensus 84 ~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~ 135 (204)
..+++|..+-..-.+ +..+++|++|++.+... ++.....+.+||.|
T Consensus 364 ~~~~~g~~i~~~G~~-~~~~yiI~~G~v~v~~~-----~~~~~~~l~~G~~f 409 (469)
T 1o7f_A 364 SHAKGGTVLFNQGEE-GTSWYIILKGSVNVVIY-----GKGVVCTLHEGDDF 409 (469)
T ss_dssp EECSTTCEEECTTSC-CCEEEEEEESEEEEEET-----TTEEEEEEETTCEE
T ss_pred eEecCCCEEEeCCCc-CCeEEEEEEeEEEEEEc-----CCeeEEEecCCCEE
Confidence 467788764333233 48899999999999763 22267889999977
No 246
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=35.48 E-value=48 Score=28.34 Aligned_cols=53 Identities=8% Similarity=0.001 Sum_probs=33.2
Q ss_pred EEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecC------CCCceeEEEeCCCcEE
Q 048039 81 MVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTA------PDYRHFSKILNKGDVF 135 (204)
Q Consensus 81 ~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~------~~~~~~~~~L~~Gd~~ 135 (204)
+....+.+|..+-.--. .+..+++|++|++.+...+.+ + .......+.+||.|
T Consensus 290 l~~~~~~~Ge~I~~eGd-~~~~~yiI~sG~v~v~~~~~~~~~~~~g-~~~~l~~l~~G~~f 348 (416)
T 3tnp_B 290 IGTKVYNDGEQIIAQGD-LADSFFIVESGEVKITMKRKGKSEVEEN-GAVEIARCFRGQYF 348 (416)
T ss_dssp CEEEEECTTCEEECTTS-CCCEEEEEEEEEEEEECC-------------CEEEEECTTCEE
T ss_pred ceEEEECCCCEEEeCCC-cCCEEEEEEeCEEEEEEecCCcccccCC-ceeEEEEeCCCCEe
Confidence 34557777775422222 348899999999999765432 1 22356788999987
No 247
>1xe7_A YML079WP, hypothetical 22.5 kDa protein in TUB1-CPR3 intergenic region; jelly roll motif, cupin superfamily, structural genomics; HET: GUN; 1.75A {Saccharomyces cerevisiae} SCOP: b.82.1.16 PDB: 1xe8_A*
Probab=35.38 E-value=1.6e+02 Score=23.05 Aligned_cols=108 Identities=17% Similarity=0.148 Sum_probs=65.5
Q ss_pred EEEEEEECCCC-CCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCC----Cc--EEEECCCCeEEEEeC-CCC
Q 048039 80 SMVRVDFAPDG-LNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNK----GD--VFVFPMGLLHYQRNV-GKV 151 (204)
Q Consensus 80 s~~~~~i~pg~-~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~----Gd--~~~~p~g~~H~~~N~-g~~ 151 (204)
+..+.-+.++. ...+|.- ++.|+.+-..|.....+..++ +..++..|.+ |+ -+++|+|.....+.. +.+
T Consensus 80 TaIYfLL~~~~~~S~wHRv-~sdEiW~~h~G~p~~~li~~d--g~~~~~~LG~dl~~Ge~pQ~vVPaG~WqaA~~~~~~~ 156 (203)
T 1xe7_A 80 TLIYYLLTPDSPIGKFHKN-INRIIHILQRGKGQYVLVYPD--GQVKSFKVGFDYKNGEVSQWVVPGGVFKASFLLPNEE 156 (203)
T ss_dssp EEEEEEEBTTBCEEEEEEE-SSCEEEEEEEECEEEEEECTT--SCEEEEEESSCGGGTCBSEEEECTTCEEEEEECCCTT
T ss_pred eEEEEEEcCCCCcccceee-CCCEEEEEEcCCccEEEEcCC--CCEEEEEeCCCcccCcccEEEEcCCEEEEeEecCCCC
Confidence 44455567775 4666654 479999999996555555554 5556777754 44 478999999887654 322
Q ss_pred CE--EEEEEEcCCCCCceecccccccCCCCCCHH-HHHHhcCCCHHHHHHHH
Q 048039 152 NA--VAIAALNSQNPGTSSIAPALFTSKPVLNDE-IISKTFLFDKKNVAILR 200 (204)
Q Consensus 152 ~a--~~i~~~~s~~pg~~~~~~~~f~~~p~~~~~-vl~~~f~~~~~~v~~l~ 200 (204)
.. .+++..- -||+..-.-.+ .+.+ -|.+.|. .+.++.|+
T Consensus 157 ~~~~tLVgCtV--aPGFdF~dFel------~~~~~~L~~~~P--~~~~~~l~ 198 (203)
T 1xe7_A 157 FDNGFLISEVV--VPGFDFEDHTF------LKGEDELKHLVG--PEKAAELA 198 (203)
T ss_dssp TTTCEEEEEEE--SSCCCGGGEEE------CCHHHHHHHHHC--HHHHHHTG
T ss_pred cccceEEEEEe--cCCccchhcEe------cCCcHHHHHHCC--HHHHHHHH
Confidence 22 4555533 46664433222 3444 4555554 66666654
No 248
>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2
Probab=33.84 E-value=12 Score=25.92 Aligned_cols=33 Identities=27% Similarity=0.474 Sum_probs=22.2
Q ss_pred CcEEEEEEeCcEEEEEEecCCCCc-eeEE--EeCCCcEE
Q 048039 100 ASEIMTLLEGTLEVGFIGTAPDYR-HFSK--ILNKGDVF 135 (204)
Q Consensus 100 a~E~~yVl~G~~~~~~~~~~~~~~-~~~~--~L~~Gd~~ 135 (204)
...+++|++|++.+. .+.+ ++ .... .+.+||++
T Consensus 47 ~~~~y~i~~G~v~~~-~~~~--g~~~~~~~~~l~~G~~f 82 (137)
T 1wgp_A 47 VNEMLFIIRGRLESV-TTDG--GRSGFYNRSLLKEGDFC 82 (137)
T ss_dssp CSEEEEEEECCCEEE-CCSS--CSSSSSCEEECCTTCBS
T ss_pred CCeEEEEEeeEEEEE-EcCC--CcceeeeeeeecCCCEe
Confidence 478999999999965 3332 22 1123 88999976
No 249
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=32.59 E-value=73 Score=27.35 Aligned_cols=74 Identities=14% Similarity=0.104 Sum_probs=52.1
Q ss_pred eEEEeCC---------CcEEEECCCCeEEEEeCCCCCEEEEEEEcCCCCC--------cee---------------cc--
Q 048039 125 FSKILNK---------GDVFVFPMGLLHYQRNVGKVNAVAIAALNSQNPG--------TSS---------------IA-- 170 (204)
Q Consensus 125 ~~~~L~~---------Gd~~~~p~g~~H~~~N~g~~~a~~i~~~~s~~pg--------~~~---------------~~-- 170 (204)
....|++ ||+.+.|+-.+|.+.-.++.|+++++-....+-. ++. .+
T Consensus 155 twr~l~~~~~~~~w~~gdsyveps~cphty~l~~d~parivsyt~~s~l~~l~~e~n~w~~~a~e~~l~~l~~~~aagv~ 234 (443)
T 3g7d_A 155 TWRVLHANHGGDRWITGDSYVEPSYCPHSYSLAGDAPARIVSYTAQSNISPLMTEANNWSTGAFEEALKALSGKVSAGSV 234 (443)
T ss_dssp TEEEECBCCSSCTTSCBCEEEECTTCCCEEEESSSSCEEEEEEECCCTTHHHHHHHTTSCHHHHHHHHHHHSSCCCHHHH
T ss_pred hheeeccCCCCCccccCCcccccccCCcccccccCCchheEeeccccchHHHHHhhcccccHHHHHHHHhhcccchHHHH
Confidence 4677888 9999999999999999999999999765433211 100 00
Q ss_pred -cccccCCCCCCHHHHHHhcCCCHHHHHHH
Q 048039 171 -PALFTSKPVLNDEIISKTFLFDKKNVAIL 199 (204)
Q Consensus 171 -~~~f~~~p~~~~~vl~~~f~~~~~~v~~l 199 (204)
...+. .-+++.+-|++..|++.+.+..+
T Consensus 235 LR~ar~-ReglTQ~~LAe~TGIPq~hISeM 263 (443)
T 3g7d_A 235 LDLFLA-RRAHTRTSAAEAAGVPPADLEAA 263 (443)
T ss_dssp HHHHHH-HTTCCHHHHHHHHTCCHHHHHHH
T ss_pred HHHHHH-hcCCCHHHHHHHhCCCHHHHHHH
Confidence 11111 12588889999999998888665
No 250
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=30.43 E-value=89 Score=29.90 Aligned_cols=56 Identities=14% Similarity=0.030 Sum_probs=38.2
Q ss_pred EEEEEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCC-CceeEEEeCCCcEEE
Q 048039 80 SMVRVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPD-YRHFSKILNKGDVFV 136 (204)
Q Consensus 80 s~~~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~-~~~~~~~L~~Gd~~~ 136 (204)
.+....+++|..+=.-=.++ ..+++|++|++.+.+.++.++ .......+.+||.|-
T Consensus 64 ~m~ye~~~~Ge~IfrqGd~g-d~fYIIlsGsV~V~i~~~~~~~~~~~v~~l~~G~sFG 120 (999)
T 4f7z_A 64 CGYYENLEKGITLFRQGDIG-TNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFG 120 (999)
T ss_dssp HCEEEEECTTCEEECTTSCC-CEEEEEEESEEEEEECSSSCTTSCEEEEEEETTCEEC
T ss_pred heEEEEECCCCEEEcCCCcC-CEEEEEEeeEEEEEEecCCCCCCceeEEEecCCcchh
Confidence 35666788887643333444 899999999999988643321 223567899999873
No 251
>3nnf_A CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependent enzymes, catal cryptic chlorination, biosynthetic protein; HET: AKG; 2.20A {Lyngbya majuscula} PDB: 3nnj_A 3nnl_A* 3nnm_A
Probab=29.71 E-value=53 Score=27.84 Aligned_cols=22 Identities=32% Similarity=0.354 Sum_probs=20.5
Q ss_pred eEEEeCCCcEEEECCCCeEEEE
Q 048039 125 FSKILNKGDVFVFPMGLLHYQR 146 (204)
Q Consensus 125 ~~~~L~~Gd~~~~p~g~~H~~~ 146 (204)
....+++||+++|...+.|...
T Consensus 234 ~ewd~epGDav~F~~~tlHga~ 255 (344)
T 3nnf_A 234 EEDEYNLGDAFFFNKYVLHQSV 255 (344)
T ss_dssp EECCBCTTCEEEEETTCEEEEC
T ss_pred ccccCCCCcEEEEecceeecCC
Confidence 6788999999999999999987
No 252
>1wy3_A Villin; structural protein; HET: NLE; 0.95A {Synthetic} PDB: 1wy4_A 1yri_A* 1yrf_A* 2f4k_A* 1vii_A 3trv_A* 3trw_A 3tjw_B* 3trv_B* 3try_A* 2ppz_A 2jm0_A* 3tjw_A* 3iur_B*
Probab=28.91 E-value=36 Score=19.05 Aligned_cols=21 Identities=29% Similarity=0.313 Sum_probs=17.3
Q ss_pred CCHHHHHHhcCCCHHHHHHHH
Q 048039 180 LNDEIISKTFLFDKKNVAILR 200 (204)
Q Consensus 180 ~~~~vl~~~f~~~~~~v~~l~ 200 (204)
++++-.++.|++++++..+|.
T Consensus 1 Lsd~dF~~vFgmsr~eF~~LP 21 (35)
T 1wy3_A 1 LSDEDFKAVFGMTRSAFANLP 21 (35)
T ss_dssp CCHHHHHHHHSSCHHHHHHSC
T ss_pred CCHHHHHHHHCCCHHHHHHCc
Confidence 467788899999999988874
No 253
>1und_A Advillin, P92; actin binding, F-actin binding, cytoskeleton, headpiece subdomain; NMR {Homo sapiens} SCOP: a.14.1.1
Probab=26.70 E-value=41 Score=19.04 Aligned_cols=21 Identities=19% Similarity=0.260 Sum_probs=18.4
Q ss_pred CCHHHHHHhcCCCHHHHHHHH
Q 048039 180 LNDEIISKTFLFDKKNVAILR 200 (204)
Q Consensus 180 ~~~~vl~~~f~~~~~~v~~l~ 200 (204)
++++-.++.|+++.++..+|.
T Consensus 3 Lsd~dF~~vFgmsr~eF~~LP 23 (37)
T 1und_A 3 LSEQDFVSVFGITRGQFAALP 23 (37)
T ss_dssp CCHHHHHHHHSSCHHHHHHSC
T ss_pred CCHHHHHHHHCcCHHHHHHCh
Confidence 678889999999999988874
No 254
>1iyc_A Scarabaecin; antifungal peptide, antimicrobial peptide, beetle, chitin-binding, antifungal protein; NMR {Synthetic} SCOP: g.31.1.2
Probab=26.38 E-value=10 Score=20.72 Aligned_cols=10 Identities=50% Similarity=0.923 Sum_probs=8.1
Q ss_pred ccCCcccCCC
Q 048039 27 FVNGAPCKDP 36 (204)
Q Consensus 27 ~~~g~~ck~~ 36 (204)
.-|||-||.|
T Consensus 23 vwngfdcksp 32 (36)
T 1iyc_A 23 VWNGFDCKSP 32 (36)
T ss_dssp EEETTEEECG
T ss_pred eecCccccCc
Confidence 3589999986
No 255
>1tc3_C Protein (TC3 transposase); DNA binding, helix-turn-helix, TC1/mariner family, complex (transposase/DNA), DNA binding protein/DNA complex; HET: DNA; 2.45A {Caenorhabditis elegans} SCOP: a.4.1.2
Probab=24.70 E-value=80 Score=17.04 Aligned_cols=25 Identities=4% Similarity=-0.003 Sum_probs=21.4
Q ss_pred CCCHHHHHHhcCCCHHHHHHHHhcC
Q 048039 179 VLNDEIISKTFLFDKKNVAILRSKF 203 (204)
Q Consensus 179 ~~~~~vl~~~f~~~~~~v~~l~~~~ 203 (204)
+++..-+|+.++++...|.+..+.+
T Consensus 21 g~s~~~IA~~lgis~~Tv~~~~~~~ 45 (51)
T 1tc3_C 21 NVSLHEMSRKISRSRHCIRVYLKDP 45 (51)
T ss_dssp TCCHHHHHHHHTCCHHHHHHHHHCS
T ss_pred CCCHHHHHHHHCcCHHHHHHHHhhH
Confidence 4788889999999999999887655
No 256
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=24.61 E-value=79 Score=25.52 Aligned_cols=26 Identities=27% Similarity=0.372 Sum_probs=21.8
Q ss_pred eEEEeCCCcEEEECCCCeEEEE-eCCC
Q 048039 125 FSKILNKGDVFVFPMGLLHYQR-NVGK 150 (204)
Q Consensus 125 ~~~~L~~Gd~~~~p~g~~H~~~-N~g~ 150 (204)
....+++||++++...++|.-. |.++
T Consensus 216 v~~~~~aGd~vlf~~~~~H~s~~N~s~ 242 (308)
T 2a1x_A 216 VHLVMEKGDTVFFHPLLIHGSGQNKTQ 242 (308)
T ss_dssp EEECBCTTCEEEECTTCCEEECCBCSS
T ss_pred EEccCCCccEEEECCCccccCCCCCCC
Confidence 6788999999999999999864 5554
No 257
>3cf6_E RAP guanine nucleotide exchange factor (GEF) 4; EPAC, rapgef4, CAMP, SP-camps, GEF, gunanine nucleotide exchange factor, G-protein, GTP-binding, nucleotide-binding; HET: SP1; 2.20A {Mus musculus}
Probab=23.55 E-value=1.1e+02 Score=28.26 Aligned_cols=47 Identities=15% Similarity=0.157 Sum_probs=33.0
Q ss_pred EEEECCCCCCCCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEE
Q 048039 83 RVDFAPDGLNPPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVF 135 (204)
Q Consensus 83 ~~~i~pg~~~ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~ 135 (204)
...+++|..+-.. ...+..+++|++|.+.+... ++.....+.+||++
T Consensus 58 ~~~~~kGe~I~~e-Gd~~~~lyiIlsG~V~v~~~-----g~~il~~l~~Gd~f 104 (694)
T 3cf6_E 58 ESHAKGGTVLFNQ-GEEGTSWYIILKGSVNVVIY-----GKGVVCTLHEGDDF 104 (694)
T ss_dssp EEECSTTCEEECT-TSBCCEEEEEEESEEEEEET-----TTEEEEEEETTCEE
T ss_pred EEEECCCCEEECC-CCcCCeEEEEEEEEEEEEEe-----CCEEEEEeCCCCEe
Confidence 4567787764322 22347899999999999764 23357888999977
No 258
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=23.50 E-value=62 Score=25.84 Aligned_cols=27 Identities=11% Similarity=0.317 Sum_probs=22.5
Q ss_pred eeEEEeCCCcEEEECCCCeEEEE-eCCC
Q 048039 124 HFSKILNKGDVFVFPMGLLHYQR-NVGK 150 (204)
Q Consensus 124 ~~~~~L~~Gd~~~~p~g~~H~~~-N~g~ 150 (204)
.....+++||++++...++|.-. |.++
T Consensus 227 ~v~~~~~aGd~~~f~~~~~H~s~~N~s~ 254 (291)
T 2opw_A 227 FVPTPVQRGALVLIHGEVVHKSKQNLSD 254 (291)
T ss_dssp CEEECBCTTCEEEEETTCEEEECCBCSS
T ss_pred eeecccCCCcEEEEcCCceecCCCCCCC
Confidence 36788999999999999999864 6554
No 259
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=23.09 E-value=1.6e+02 Score=24.32 Aligned_cols=67 Identities=13% Similarity=0.075 Sum_probs=44.0
Q ss_pred eEEEEEEEECCCCCC-CCccCCCCcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEEEECCCCeEE-------EEeCC
Q 048039 78 GLSMVRVDFAPDGLN-PPHTHPRASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVFVFPMGLLHY-------QRNVG 149 (204)
Q Consensus 78 g~s~~~~~i~pg~~~-ppH~H~~a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~~~p~g~~H~-------~~N~g 149 (204)
|.....+.+.||... ..-.|+- .|=+|+|+|.+. .|+-++-|+|+.|. -. .+
T Consensus 216 G~~TrLlr~~Pg~dt~~v~iHdy-~EEvY~LeG~~d------------------~G~Y~~RPpg~~HGps~~~~ppf-~S 275 (303)
T 2qdr_A 216 GGGVWLLAILPHFDNKYQMIQPY-NEEGYCLTGYCD------------------VGDYRIVKDHYWYCPSFSTLPRH-IT 275 (303)
T ss_dssp SCEEEEEEECSSEECCSEEEECS-CEEEEEEEEEEE------------------ETTEEEETTEEEEECTTEEECCE-EE
T ss_pred CCeEEEEEECCCCCCCCceeecc-ceeEEEEeeecc------------------CceeeEcCCCCccCccccCCCCc-Cc
Confidence 445666788888643 3335766 777899999762 26688889999998 22 23
Q ss_pred CCCEEEEEEEcCCCC
Q 048039 150 KVNAVAIAALNSQNP 164 (204)
Q Consensus 150 ~~~a~~i~~~~s~~p 164 (204)
+..+.++.-...+.-
T Consensus 276 e~G~l~fvR~DgdLs 290 (303)
T 2qdr_A 276 DDGGLFFVRVDRDLS 290 (303)
T ss_dssp SSCEEEEEEESSCTT
T ss_pred CCceEEEEEeCcccc
Confidence 566777766555543
No 260
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=23.03 E-value=83 Score=30.11 Aligned_cols=31 Identities=23% Similarity=0.363 Sum_probs=24.5
Q ss_pred CcEEEEEEeCcEEEEEEecCCCCceeEEEeCCCcEE
Q 048039 100 ASEIMTLLEGTLEVGFIGTAPDYRHFSKILNKGDVF 135 (204)
Q Consensus 100 a~E~~yVl~G~~~~~~~~~~~~~~~~~~~L~~Gd~~ 135 (204)
+..+.+|++|++.+... ++....+|++||.|
T Consensus 379 gds~YIIlsG~V~V~~~-----~~~~v~~L~~Gd~F 409 (999)
T 4f7z_A 379 GTSWYIILKGSVNVVIY-----GKGVVCTLHEGDDF 409 (999)
T ss_dssp CCEEEEEEESEEEEEET-----TTEEEEEEETTCEE
T ss_pred CCeEEEEEeeEEEEEEc-----CCcceEEecCCCcc
Confidence 47889999999988653 23367889999998
No 261
>2dkz_A Hypothetical protein LOC64762; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.20 E-value=82 Score=21.22 Aligned_cols=28 Identities=29% Similarity=0.438 Sum_probs=23.1
Q ss_pred cccccCCCCCCHHHHHHhcCCCHHHHHHHHh
Q 048039 171 PALFTSKPVLNDEIISKTFLFDKKNVAILRS 201 (204)
Q Consensus 171 ~~~f~~~p~~~~~vl~~~f~~~~~~v~~l~~ 201 (204)
.++|-. +++|+|..-|++++-++.||++
T Consensus 47 G~lL~~---L~ee~L~edf~ls~Lq~kKi~~ 74 (84)
T 2dkz_A 47 GNLLVQ---LTEEILSEDFKLSKLQVKKIMQ 74 (84)
T ss_dssp HHHHHH---CCHHHHHHTSCCCHHHHHHHHH
T ss_pred hHHHHh---CCHHHHHhhcCCCHHHHHHHHH
Confidence 455553 9999999999999999998875
No 262
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=21.66 E-value=87 Score=25.30 Aligned_cols=25 Identities=16% Similarity=0.280 Sum_probs=21.4
Q ss_pred eeEEEeCCCcEEEECCCCeEEE-EeC
Q 048039 124 HFSKILNKGDVFVFPMGLLHYQ-RNV 148 (204)
Q Consensus 124 ~~~~~L~~Gd~~~~p~g~~H~~-~N~ 148 (204)
.....+++||++++...++|.- .|.
T Consensus 219 ~v~~~~~aGd~v~f~~~l~H~s~~N~ 244 (313)
T 2fct_A 219 AVPMQMKAGQFIIFWSTLMHASYPHS 244 (313)
T ss_dssp CEEECBCTTEEEEEETTSEEEECCBC
T ss_pred eeEeeeCCceEEEEeCCceeeCCCCC
Confidence 3678899999999999999985 465
No 263
>3dxt_A JMJC domain-containing histone demethylation PROT; JMJD2D, histone demethylase, H3K9, jumonji domain-CONT protein 2D, oxidoreductase; 1.80A {Homo sapiens} PDB: 3dxu_A* 4hon_A* 4hoo_A 2w2i_A*
Probab=20.19 E-value=1.2e+02 Score=25.94 Aligned_cols=32 Identities=25% Similarity=-0.017 Sum_probs=26.2
Q ss_pred eEEEeCCCcEEEECCCCeEEEEeCCCCCEEEE
Q 048039 125 FSKILNKGDVFVFPMGLLHYQRNVGKVNAVAI 156 (204)
Q Consensus 125 ~~~~L~~Gd~~~~p~g~~H~~~N~g~~~a~~i 156 (204)
....-++||.++.-+|..|+..|.|-.-+..+
T Consensus 262 ~~~vQ~pGEfViTfP~aYH~gfn~Gfn~aEAv 293 (354)
T 3dxt_A 262 NRITQEAGEFMVTFPYGYHAGFNHGFNCAEAI 293 (354)
T ss_dssp EEEEECTTCEEEECTTCEEEEEESSSEEEEEE
T ss_pred EEEEeCCCcEEEECCCceEEEeeccccHhHhh
Confidence 46677999999999999999999986544444
Done!