Query 048042
Match_columns 209
No_of_seqs 258 out of 2022
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 09:36:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048042.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048042hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 100.0 4.3E-40 1.5E-44 294.7 14.5 171 27-201 3-350 (356)
2 1w9y_A 1-aminocyclopropane-1-c 100.0 8.4E-36 2.9E-40 263.4 8.2 140 64-208 2-305 (319)
3 3oox_A Putative 2OG-Fe(II) oxy 100.0 2.6E-33 9E-38 246.3 10.0 128 63-195 4-308 (312)
4 1dcs_A Deacetoxycephalosporin 100.0 2.3E-29 7.9E-34 221.3 4.1 68 125-197 232-306 (311)
5 1odm_A Isopenicillin N synthas 99.9 1.9E-27 6.3E-32 210.7 11.5 67 125-197 259-325 (331)
6 3on7_A Oxidoreductase, iron/as 99.9 3.4E-26 1.2E-30 198.5 10.7 53 64-122 2-54 (280)
7 2dbn_A Hypothetical protein YB 49.8 6.5 0.00022 35.9 1.8 53 62-118 97-149 (461)
8 4ay7_A Methylcobalamin\: coenz 46.5 30 0.001 29.4 5.6 42 79-120 303-348 (348)
9 1m5a_B Insulin B chain; alpha 44.7 23 0.00077 20.0 2.9 19 80-98 9-27 (30)
10 1otj_A Alpha-ketoglutarate-dep 39.6 35 0.0012 28.0 4.7 51 62-118 14-64 (283)
11 2opi_A L-fuculose-1-phosphate 38.1 16 0.00053 29.2 2.2 36 65-103 125-160 (212)
12 3o2g_A Gamma-butyrobetaine dio 35.8 18 0.00061 31.7 2.4 50 65-119 122-171 (388)
13 2j01_J 50S ribosomal protein L 34.4 84 0.0029 24.2 5.9 38 79-116 6-45 (173)
14 1zav_A 50S ribosomal protein L 33.3 81 0.0028 24.5 5.7 40 78-117 7-47 (180)
15 3pvj_A Alpha-ketoglutarate-dep 33.2 52 0.0018 27.2 4.8 53 62-120 12-64 (277)
16 1oih_A Putative alkylsulfatase 32.6 53 0.0018 27.1 4.8 52 62-119 24-76 (301)
17 2rg4_A Uncharacterized protein 32.3 18 0.00063 29.0 1.8 25 134-158 185-209 (216)
18 1e4c_P L-fuculose 1-phosphate 32.0 22 0.00075 28.4 2.2 37 64-103 121-157 (215)
19 2fk5_A Fuculose-1-phosphate al 31.2 28 0.00096 27.5 2.7 36 65-103 117-153 (200)
20 2irp_A Putative aldolase class 30.0 31 0.0011 27.2 2.7 35 65-103 139-176 (208)
21 1pvt_A Sugar-phosphate aldolas 27.7 31 0.0011 27.9 2.4 37 64-103 160-196 (238)
22 2v9l_A Rhamnulose-1-phosphate 26.5 29 0.001 28.9 2.0 36 65-103 179-214 (274)
23 3r1j_A Alpha-ketoglutarate-dep 25.6 86 0.0029 26.3 4.9 51 62-118 18-69 (301)
24 3jsy_A Acidic ribosomal protei 23.5 1.6E+02 0.0055 23.5 6.0 38 79-116 5-43 (213)
25 4f21_A Carboxylesterase/phosph 23.2 1.3E+02 0.0043 24.0 5.3 41 80-120 199-245 (246)
26 3ocr_A Class II aldolase/adduc 22.1 55 0.0019 27.3 2.9 37 65-103 156-192 (273)
27 2rdq_A 1-deoxypentalenic acid 22.0 97 0.0033 25.0 4.5 36 84-120 22-57 (288)
28 1vm6_A DHPR, dihydrodipicolina 21.4 1E+02 0.0036 25.2 4.4 39 81-119 90-128 (228)
29 2vf9_A Coat protein; virion, R 21.0 19 0.00064 26.0 -0.2 15 125-139 51-65 (131)
30 3m0z_A Putative aldolase; MCSG 20.8 2.1E+02 0.0071 23.7 6.0 37 78-115 171-208 (249)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=4.3e-40 Score=294.70 Aligned_cols=171 Identities=26% Similarity=0.431 Sum_probs=152.4
Q ss_pred cCcchHHHHHCCCCCCCCccccCCCcchhhhc---cc--CCCCCCceeeCCCCCC--C-cHHHHHHHHHHHHhHcCeeEE
Q 048042 27 TKAGVKGLVDAGVVNIPRIFIRQPEELAQELT---TH--RTKLQLPVVDLDGIKD--N-KLEDIVDQVRAASETWGFFKV 98 (209)
Q Consensus 27 ~~~~v~~l~~~~~~~vP~~yv~p~~~~~~~~~---~~--~~~~~IPvIDls~l~~--~-~~~~~~~~l~~A~~~~GFF~l 98 (209)
++++||+|+++|+.+||++|++|+++++.... .. .....||+|||+.+.+ + .+.+++++|.+||++||||||
T Consensus 3 ~~~~v~~l~~~~~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v 82 (356)
T 1gp6_A 3 AVERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHL 82 (356)
T ss_dssp CCCCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred CcccHHHHHhcCCCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEE
Confidence 45789999999999999999999888765311 00 0124699999999843 2 467799999999999999999
Q ss_pred eecCCCHHHHHHHHHHHHhhcccchh------------------------------------------------------
Q 048042 99 INYGVSLNLIQEMIEGVHKFNEQDVE------------------------------------------------------ 124 (209)
Q Consensus 99 ~nHgI~~eli~~~~~~~~~FF~lP~e------------------------------------------------------ 124 (209)
+||||+.++++++++.+++||+||.|
T Consensus 83 ~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~~ 162 (356)
T 1gp6_A 83 INHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTP 162 (356)
T ss_dssp ESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSS
T ss_pred eCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCCcc
Confidence 99999999999999999999999987
Q ss_pred --------------------------------------------------------------------------------
Q 048042 125 -------------------------------------------------------------------------------- 124 (209)
Q Consensus 125 -------------------------------------------------------------------------------- 124 (209)
T Consensus 163 ~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~ 242 (356)
T 1gp6_A 163 SDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFIL 242 (356)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEE
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEEEE
Confidence
Q ss_pred ----------------------------------hhcCCcccccccccccCCCCCccceeEeccccCCCCCCC-ceecCC
Q 048042 125 ----------------------------------VISNDKLKSVDYRVVPNVHATARIVVACFFTGHATKAQK-PFGPIK 169 (209)
Q Consensus 125 ----------------------------------~~sNg~~kS~~HRv~~~~~~~~R~Sia~F~~P~~~~~d~-~i~Pl~ 169 (209)
+||||+|||+.|||+++ ..++|+|++||++|+. |+ +|+|++
T Consensus 243 qd~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~-~~~~R~Sia~F~~P~~---d~~~i~pl~ 318 (356)
T 1gp6_A 243 HNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVN-KEKVRISWAVFCEPPK---DKIVLKPLP 318 (356)
T ss_dssp ECSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCC-SSCCEEEEEEEEECCT---TTCEECCCG
T ss_pred EcCCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCC-CCCCEEEEEEeecCCC---CCcEEeCCh
Confidence 89999999999999999 8899999999999997 99 999999
Q ss_pred cccCCCCCCCCCccCHHHHHHHHHhcccCCcc
Q 048042 170 ELISEENPPVYRQFLVEEYMSKCFSRELQSKS 201 (209)
Q Consensus 170 elv~~~~p~~yr~~~~~ey~~~~~~~~~~gk~ 201 (209)
+|+++++|++|++++++||+..++..+++||.
T Consensus 319 ~~~~~~~p~~y~~~t~~eyl~~~~~~~~d~~~ 350 (356)
T 1gp6_A 319 EMVSVESPAKFPPRTFAQHIEHKLFGKEQEEL 350 (356)
T ss_dssp GGCCSSSCCSSCCEEHHHHHHHHHHHHHHHHC
T ss_pred hhcCCCCCccCCCccHHHHHHHHHHhccCcch
Confidence 99999999999999999999999998888874
No 2
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=8.4e-36 Score=263.41 Aligned_cols=140 Identities=27% Similarity=0.513 Sum_probs=124.3
Q ss_pred CCCceeeCCCCCCCcHHHHHHHHHHHHhHcCeeEEeecCCCHHHHHHHHHHHHhhcccchh-------------------
Q 048042 64 LQLPVVDLDGIKDNKLEDIVDQVRAASETWGFFKVINYGVSLNLIQEMIEGVHKFNEQDVE------------------- 124 (209)
Q Consensus 64 ~~IPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~l~nHgI~~eli~~~~~~~~~FF~lP~e------------------- 124 (209)
..||+|||+.+...++.+++++|.+||++||||||+||||+.++++++++.+++||+||.|
T Consensus 2 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~~~Gy~~~~~e~ 81 (319)
T 1w9y_A 2 ENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEGVQAEV 81 (319)
T ss_dssp CCCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCG
T ss_pred CCCCEEECcccCcccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccCCCCCCcccccC
Confidence 3699999998743357889999999999999999999999999999999999999999987
Q ss_pred --------------------------------------------------------------------------------
Q 048042 125 -------------------------------------------------------------------------------- 124 (209)
Q Consensus 125 -------------------------------------------------------------------------------- 124 (209)
T Consensus 82 ~~~d~ke~~~~~~~p~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~ 161 (319)
T 1w9y_A 82 TDMDWESTFFLKHLPISNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSN 161 (319)
T ss_dssp GGCCCCEEEEEEEESCCGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTCCEEEEEEEE
T ss_pred CCCChhhheeeecCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcCCccceeEEEe
Confidence
Q ss_pred -------------------------------------------------------------hhcCCcccccccccccCCC
Q 048042 125 -------------------------------------------------------------VISNDKLKSVDYRVVPNVH 143 (209)
Q Consensus 125 -------------------------------------------------------------~~sNg~~kS~~HRv~~~~~ 143 (209)
+||||+|||+.|||+++ .
T Consensus 162 YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~SnG~~kS~~HRVv~~-~ 240 (319)
T 1w9y_A 162 YPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQ-K 240 (319)
T ss_dssp CCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCC-S
T ss_pred cCCCcccccccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHHhCCeeecccceecCC-C
Confidence 89999999999999999 8
Q ss_pred CCccceeEeccccCCCCCCCceecCCcccCCC---CCCCCCccCHHHHHHHHHhcccCCcccc-ccccC
Q 048042 144 ATARIVVACFFTGHATKAQKPFGPIKELISEE---NPPVYRQFLVEEYMSKCFSRELQSKSIG-LEQFK 208 (209)
Q Consensus 144 ~~~R~Sia~F~~P~~~~~d~~i~Pl~elv~~~---~p~~yr~~~~~ey~~~~~~~~~~gk~~~-ld~~~ 208 (209)
.++|+|++||++|+. |++|+|+++|++++ +|++|++++++||+..+++..+.||. . ++.+|
T Consensus 241 ~~~R~Sia~F~~p~~---d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~~~~~~~~-~~~~~~~ 305 (319)
T 1w9y_A 241 DGARMSLASFYNPGS---DAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKE-PRFEAMK 305 (319)
T ss_dssp SSCCEEEEEEEECCT---TCEECCCGGGC--------CCCCCEEHHHHHHTTTTTTCSSHH-HHHHHHH
T ss_pred CCCceEEEEEecCCC---CCeEeCchhhcCcccccCccccCcEeHHHHHHHHHhhhcCcch-hHHHHHH
Confidence 999999999999997 99999999999988 69999999999999999999988885 4 55554
No 3
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=2.6e-33 Score=246.34 Aligned_cols=128 Identities=18% Similarity=0.304 Sum_probs=117.4
Q ss_pred CCCCceeeCCCCCCCcHHHHHHHHHHHHhHcCeeEEeecCCCHHHHHHHHHHHHhhcccchh------------------
Q 048042 63 KLQLPVVDLDGIKDNKLEDIVDQVRAASETWGFFKVINYGVSLNLIQEMIEGVHKFNEQDVE------------------ 124 (209)
Q Consensus 63 ~~~IPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~l~nHgI~~eli~~~~~~~~~FF~lP~e------------------ 124 (209)
..+||||||+.+.+ ++.+++++|.+||++||||||+||||+.++++++++.+++||+||.|
T Consensus 4 ~~~iPvIDls~~~~-~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~~~ 82 (312)
T 3oox_A 4 TSAIDPVSFSLYAK-DFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARGYIPF 82 (312)
T ss_dssp CCSSCCEETHHHHH-CHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGTSEEECC
T ss_pred CCCCCeEEChHhcc-cHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCccccccc
Confidence 45799999987632 46789999999999999999999999999999999999999999988
Q ss_pred --------------------------------------------------------------------------------
Q 048042 125 -------------------------------------------------------------------------------- 124 (209)
Q Consensus 125 -------------------------------------------------------------------------------- 124 (209)
T Consensus 83 g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~ 162 (312)
T 3oox_A 83 GVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFFKP 162 (312)
T ss_dssp CCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTHH
T ss_pred cceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHH
Confidence
Q ss_pred --------------------------------------------------------------------------hhcCCc
Q 048042 125 --------------------------------------------------------------------------VISNDK 130 (209)
Q Consensus 125 --------------------------------------------------------------------------~~sNg~ 130 (209)
+||||+
T Consensus 163 ~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~TnG~ 242 (312)
T 3oox_A 163 TVQDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAEEGGLEVLDRDGQWLPINPPPGCLVINIGDMLERLTNNV 242 (312)
T ss_dssp HHTTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECCTTSCEEEECTTSCEEECCCCSSCEEEEECHHHHHHTTTS
T ss_pred HhcCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeEcCcCceEEECCCCcEEECCCCCCeEEEEhHHHHHHHhCCe
Confidence 899999
Q ss_pred ccccccccccCCC----CCccceeEeccccCCCCCCCceecCCcccCCCCCCCCC-ccCHHHHHHHHHhc
Q 048042 131 LKSVDYRVVPNVH----ATARIVVACFFTGHATKAQKPFGPIKELISEENPPVYR-QFLVEEYMSKCFSR 195 (209)
Q Consensus 131 ~kS~~HRv~~~~~----~~~R~Sia~F~~P~~~~~d~~i~Pl~elv~~~~p~~yr-~~~~~ey~~~~~~~ 195 (209)
|+|+.|||+.+ . ..+|+|++||++|+. |++|+|+++|+++++|++|+ +++++||+..+++.
T Consensus 243 ~kS~~HRVv~~-~~~~~~~~R~Sia~F~~P~~---d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~ 308 (312)
T 3oox_A 243 LPSTVHRVVNP-PPERRGVPRYSTPFFLHFAS---DYEIKTLQNCVTAENPDRYPESITADEFLQQRLRE 308 (312)
T ss_dssp SCCCCEEECCC-CGGGTTSCEEECCEEECCCT---TCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHH
T ss_pred ecCCCceEeCC-CccCCCCCEEEEEEEecCCC---CcEEecCccccCCCCcccCCCCeeHHHHHHHHHHH
Confidence 99999999764 3 467999999999997 99999999999999999999 99999999998864
No 4
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=99.95 E-value=2.3e-29 Score=221.31 Aligned_cols=68 Identities=9% Similarity=0.127 Sum_probs=62.2
Q ss_pred hhcCCcccccccccccCCC-----CCccceeEeccccCCCCCCCceecCCcccCCCCCCCC--CccCHHHHHHHHHhccc
Q 048042 125 VISNDKLKSVDYRVVPNVH-----ATARIVVACFFTGHATKAQKPFGPIKELISEENPPVY--RQFLVEEYMSKCFSREL 197 (209)
Q Consensus 125 ~~sNg~~kS~~HRv~~~~~-----~~~R~Sia~F~~P~~~~~d~~i~Pl~elv~~~~p~~y--r~~~~~ey~~~~~~~~~ 197 (209)
+||||+|||+.|||+++ . .++|+|++||+.|+. |++|+ +++|+++++|++| ++++++||+..+++...
T Consensus 232 ~~TnG~~kS~~HRVv~~-~~~~~~~~~R~Si~~F~~p~~---d~~i~-l~~~~~~~~p~~y~~~~~t~~ey~~~~~~~~~ 306 (311)
T 1dcs_A 232 LVTGGQVKAPRHHVAAP-RRDQIAGSSRTSSVFFLRPNA---DFTFS-VPLARECGFDVSLDGETATFQDWIGGNYVNIR 306 (311)
T ss_dssp HHTTSCSCCCCEEECCC-----CTTCCEEEEEEEECCCT---TCEEE-HHHHHHTTCCCCCCSSEEEHHHHHCSSCCCEE
T ss_pred HHhCCcccCCCceEeCC-CcccCCCCCeEEEEEEEcCCC---CcEEe-CCcccCCCCccccCCCCccHHHHHHHHHHHHh
Confidence 89999999999999998 7 789999999999997 99999 9999999999999 99999999988776544
No 5
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=99.94 E-value=1.9e-27 Score=210.71 Aligned_cols=67 Identities=12% Similarity=0.096 Sum_probs=61.6
Q ss_pred hhcCCcccccccccccCCCCCccceeEeccccCCCCCCCceecCCcccCCCCCCCCCccCHHHHHHHHHhccc
Q 048042 125 VISNDKLKSVDYRVVPNVHATARIVVACFFTGHATKAQKPFGPIKELISEENPPVYRQFLVEEYMSKCFSREL 197 (209)
Q Consensus 125 ~~sNg~~kS~~HRv~~~~~~~~R~Sia~F~~P~~~~~d~~i~Pl~elv~~~~p~~yr~~~~~ey~~~~~~~~~ 197 (209)
+||||+|||+.|||+ + ..++|+|++||+.|+. |++|+|+++++++++ ++|++++++||+..+++..+
T Consensus 259 ~~TnG~~kS~~HRVv-~-~~~~R~Sia~F~~P~~---d~~i~pl~~~~~~~~-~~y~~~t~~e~l~~~~~~~~ 325 (331)
T 1odm_A 259 HLTNNYYKAPIHRVK-W-VNAERQSLPFFVNLGY---DSVIDPFDPREPNGK-SDREPLSYGDYLQNGLVSLI 325 (331)
T ss_dssp HHTTTSSCCCCEEEE-C-CCSCEEEEEEEECCCT---TCBCCCCCTTSTTCC-CSSCCCBHHHHHHHHHHHHH
T ss_pred HHhCCEeeCCCceeC-C-CCCCEEEEEEEEcCCC---CCEEeCCCccccccc-cCCCCccHHHHHHHHHHHHH
Confidence 899999999999997 5 6789999999999997 999999999999888 99999999999999887543
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=99.93 E-value=3.4e-26 Score=198.55 Aligned_cols=53 Identities=15% Similarity=0.247 Sum_probs=47.5
Q ss_pred CCCceeeCCCCCCCcHHHHHHHHHHHHhHcCeeEEeecCCCHHHHHHHHHHHHhhcccc
Q 048042 64 LQLPVVDLDGIKDNKLEDIVDQVRAASETWGFFKVINYGVSLNLIQEMIEGVHKFNEQD 122 (209)
Q Consensus 64 ~~IPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~l~nHgI~~eli~~~~~~~~~FF~lP 122 (209)
++||||||+.. +.+++|.+||++||||||+||||+.++++++++.+++||+|+
T Consensus 2 ~~IPvIDls~~------~~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~le 54 (280)
T 3on7_A 2 MKLETIDYRAA------DSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNSE 54 (280)
T ss_dssp --CCEEETTST------THHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTSG
T ss_pred CCCCEEECCCh------hHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhhH
Confidence 57999999863 357999999999999999999999999999999999999984
No 7
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=49.81 E-value=6.5 Score=35.86 Aligned_cols=53 Identities=11% Similarity=0.127 Sum_probs=35.7
Q ss_pred CCCCCceeeCCCCCCCcHHHHHHHHHHHHhHcCeeEEeecCCCHHHHHHHHHHHHhh
Q 048042 62 TKLQLPVVDLDGIKDNKLEDIVDQVRAASETWGFFKVINYGVSLNLIQEMIEGVHKF 118 (209)
Q Consensus 62 ~~~~IPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~l~nHgI~~eli~~~~~~~~~F 118 (209)
...-||.||++.+.++ .+-++..+..++.|++.|.|. ||.+...+..+...+|
T Consensus 97 G~~~iP~i~f~di~~~---~~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~y 149 (461)
T 2dbn_A 97 GDAVWPVLSYADIKAG---HVTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDY 149 (461)
T ss_dssp TCCSSCEEEHHHHHHT---CCCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHH
T ss_pred CCCCcceecHHHhcCC---CCCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHH
Confidence 4568999999876211 122455678899999988886 8887655554444444
No 8
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=46.54 E-value=30 Score=29.44 Aligned_cols=42 Identities=14% Similarity=0.205 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHhHcCeeEEeecCCC----HHHHHHHHHHHHhhcc
Q 048042 79 LEDIVDQVRAASETWGFFKVINYGVS----LNLIQEMIEGVHKFNE 120 (209)
Q Consensus 79 ~~~~~~~l~~A~~~~GFF~l~nHgI~----~eli~~~~~~~~~FF~ 120 (209)
.+++.+++.+.++.-||..=.+|||+ .|-+..+.+++++||+
T Consensus 303 ~e~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 303 VDKIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp HHHHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 45666777778888888766789976 4678999999999985
No 9
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=44.67 E-value=23 Score=20.02 Aligned_cols=19 Identities=21% Similarity=0.427 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHhHcCeeEE
Q 048042 80 EDIVDQVRAASETWGFFKV 98 (209)
Q Consensus 80 ~~~~~~l~~A~~~~GFF~l 98 (209)
..+++.|.-.|.+-|||+-
T Consensus 9 s~LVdaL~~vCgdRGF~~~ 27 (30)
T 1m5a_B 9 SHLVEALYLVCGERGFFYT 27 (30)
T ss_dssp HHHHHHHHHHHGGGCEEEC
T ss_pred HHHHHHHHHHhccCccccC
Confidence 4678899999999999973
No 10
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=39.58 E-value=35 Score=27.96 Aligned_cols=51 Identities=12% Similarity=0.059 Sum_probs=37.2
Q ss_pred CCCCCceeeCCCCCCCcHHHHHHHHHHHHhHcCeeEEeecCCCHHHHHHHHHHHHhh
Q 048042 62 TKLQLPVVDLDGIKDNKLEDIVDQVRAASETWGFFKVINYGVSLNLIQEMIEGVHKF 118 (209)
Q Consensus 62 ~~~~IPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~l~nHgI~~eli~~~~~~~~~F 118 (209)
....|+-|||+...+ .+..++|..++.++|+..+.+-.++.+.. .+.++.|
T Consensus 14 ~Gaei~gvdl~~~l~---~~~~~~l~~~l~~~Gvv~frg~~~~~~~~---~~~~~~~ 64 (283)
T 1otj_A 14 IGAQISGADLTRPLS---DNQFEQLYHAVLRHQVVFLRDQAITPQQQ---RALAQRF 64 (283)
T ss_dssp SCEEEESCCSSSCCC---HHHHHHHHHHHHHHSEEEECSCCCCHHHH---HHHHHTT
T ss_pred ceEEEECCCcCccCC---HHHHHHHHHHHHHCCEEEECCCCCCHHHH---HHHHHHh
Confidence 445678889987422 35678999999999999999988876543 3445555
No 11
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=38.09 E-value=16 Score=29.21 Aligned_cols=36 Identities=17% Similarity=0.151 Sum_probs=28.2
Q ss_pred CCceeeCCCCCCCcHHHHHHHHHHHHhHcCeeEEeecCC
Q 048042 65 QLPVVDLDGIKDNKLEDIVDQVRAASETWGFFKVINYGV 103 (209)
Q Consensus 65 ~IPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~l~nHgI 103 (209)
.||++++.... ..++.+.+.+++.+.-.+.|-|||+
T Consensus 125 ~v~~~~y~~~g---~~~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYRPG---SPELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCCTT---CHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CeEEEcCCCCC---cHHHHHHHHHHhccCCEEEEcCCCc
Confidence 69999886543 2467788888888878888889995
No 12
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=35.85 E-value=18 Score=31.70 Aligned_cols=50 Identities=10% Similarity=0.179 Sum_probs=36.7
Q ss_pred CCceeeCCCCCCCcHHHHHHHHHHHHhHcCeeEEeecCCCHHHHHHHHHHHHhhc
Q 048042 65 QLPVVDLDGIKDNKLEDIVDQVRAASETWGFFKVINYGVSLNLIQEMIEGVHKFN 119 (209)
Q Consensus 65 ~IPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~l~nHgI~~eli~~~~~~~~~FF 119 (209)
.+|-||++.+.. ..+.+.++..|+.++|+..+.|-.++.+... +.++.|=
T Consensus 122 ~~~~~~~~~~l~--~d~~~~~~~~~l~~~Gvv~frg~~~~~~~~~---~~a~~~G 171 (388)
T 3o2g_A 122 QLPTLDFEDVLR--YDEHAYKWLSTLKKVGIVRLTGASDKPGEVS---KLGKRMG 171 (388)
T ss_dssp CCCEEEHHHHHH--CHHHHHHHHHHHHHHSEEEEECCCSSTTHHH---HHHHHHS
T ss_pred CCCccCHHHHhc--CHHHHHHHHHHHHhcCEEEEeCCCCCHHHHH---HHHHHhC
Confidence 689999876521 2467889999999999999999988865433 3455553
No 13
>2j01_J 50S ribosomal protein L10; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} PDB: 2j03_J 3d5b_J 3d5d_J 3i8i_Y 3kir_J 3kit_J 3kiw_J 3kiy_J 3mrz_I 3ms1_I 3pyt_I 3pyr_I 3pyo_I 3pyv_I
Probab=34.36 E-value=84 Score=24.20 Aligned_cols=38 Identities=11% Similarity=0.196 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHhHcC-eeEEee-cCCCHHHHHHHHHHHH
Q 048042 79 LEDIVDQVRAASETWG-FFKVIN-YGVSLNLIQEMIEGVH 116 (209)
Q Consensus 79 ~~~~~~~l~~A~~~~G-FF~l~n-HgI~~eli~~~~~~~~ 116 (209)
..+.+++|.+.++++. .+++++ +|++.+.+.++....+
T Consensus 6 K~~~v~el~~~l~~~~~~v~v~~~~gltv~~~~~LR~~lr 45 (173)
T 2j01_J 6 NVELLATLKENLERAQGSFFLVNYQGLPAKETHALRQALK 45 (173)
T ss_pred HHHHHHHHHHHHHHCCCEEEEEEcCCCCHHHHHHHHHHHH
Confidence 5678899999999999 777765 5899988888887664
No 14
>1zav_A 50S ribosomal protein L10; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: d.58.62.1 PDB: 1zaw_A 1zax_A
Probab=33.28 E-value=81 Score=24.47 Aligned_cols=40 Identities=13% Similarity=0.230 Sum_probs=33.3
Q ss_pred cHHHHHHHHHHHHhHcCeeEEeec-CCCHHHHHHHHHHHHh
Q 048042 78 KLEDIVDQVRAASETWGFFKVINY-GVSLNLIQEMIEGVHK 117 (209)
Q Consensus 78 ~~~~~~~~l~~A~~~~GFF~l~nH-gI~~eli~~~~~~~~~ 117 (209)
...+.+++|.+.+++...++++++ |++.+.+.++....++
T Consensus 7 ~K~~~v~el~~~l~~~~~v~v~~~~gltv~q~~~LR~~lr~ 47 (180)
T 1zav_A 7 QKELIVKEMSEIFKKTSLILFADFLGFTVADLTELRSRLRE 47 (180)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCEEEEEEeCCCCHHHHHHHHHHHHh
Confidence 356788999999999999888865 8999888888877654
No 15
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=33.25 E-value=52 Score=27.21 Aligned_cols=53 Identities=11% Similarity=0.060 Sum_probs=39.0
Q ss_pred CCCCCceeeCCCCCCCcHHHHHHHHHHHHhHcCeeEEeecCCCHHHHHHHHHHHHhhcc
Q 048042 62 TKLQLPVVDLDGIKDNKLEDIVDQVRAASETWGFFKVINYGVSLNLIQEMIEGVHKFNE 120 (209)
Q Consensus 62 ~~~~IPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~l~nHgI~~eli~~~~~~~~~FF~ 120 (209)
.+..|.=|||+...+ .+..++|..|+.++|...+.|-.++.+. ..+.++.|=.
T Consensus 12 ~Gaei~gvdl~~~l~---~~~~~~l~~~l~~~gvv~fR~q~l~~~~---~~~fa~~fG~ 64 (277)
T 3pvj_A 12 LGAQISGVDISRDIS---AEERDAIEQALLQHQVLFLRDQPINPEQ---QARFAARFGD 64 (277)
T ss_dssp SCEEEESCCTTSCCC---HHHHHHHHHHHHHHSEEEESSCCCCHHH---HHHHHGGGSC
T ss_pred eeEEEeCCCccccCC---HHHHHHHHHHHHHCCEEEECCCCCCHHH---HHHHHHHhCC
Confidence 456677789987322 3677899999999999999999887653 3455666643
No 16
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=32.58 E-value=53 Score=27.15 Aligned_cols=52 Identities=12% Similarity=-0.030 Sum_probs=37.4
Q ss_pred CCCCCceeeCCCCCCCcHHHHHHHHHHHHhHcCeeEEeecC-CCHHHHHHHHHHHHhhc
Q 048042 62 TKLQLPVVDLDGIKDNKLEDIVDQVRAASETWGFFKVINYG-VSLNLIQEMIEGVHKFN 119 (209)
Q Consensus 62 ~~~~IPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~l~nHg-I~~eli~~~~~~~~~FF 119 (209)
....|+-|||+...+ .+..++|..++.++|+..+.+-. ++.+ +..+.++.|=
T Consensus 24 ~Gaei~gvdl~~~l~---~~~~~~l~~~l~~~Gvv~fRg~~~l~~~---~~~~~~~~fG 76 (301)
T 1oih_A 24 IGAEIRGVKLSPDLD---AATVEAIQAALVRHKVIFFRGQTHLDDQ---SQEGFAKLLG 76 (301)
T ss_dssp SCEEEESCCCCTTCC---HHHHHHHHHHHHHHSEEEECCCTTCCHH---HHHHHHHTTS
T ss_pred cceEEeCCCccccCC---HHHHHHHHHHHHHCCEEEECCCCCCCHH---HHHHHHHHhC
Confidence 345677788877322 35678999999999999999987 8754 4445566654
No 17
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=32.32 E-value=18 Score=29.04 Aligned_cols=25 Identities=20% Similarity=0.158 Sum_probs=18.6
Q ss_pred cccccccCCCCCccceeEeccccCC
Q 048042 134 VDYRVVPNVHATARIVVACFFTGHA 158 (209)
Q Consensus 134 ~~HRv~~~~~~~~R~Sia~F~~P~~ 158 (209)
..|.|..+.+..+|+||+|.+.+..
T Consensus 185 l~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 185 LRHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp SCEEECCCCSSSCEEEEEEEEEC--
T ss_pred CEEeccCCCCCCCEEEEEEEeecCC
Confidence 5799988724579999999887763
No 18
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=32.04 E-value=22 Score=28.38 Aligned_cols=37 Identities=11% Similarity=0.145 Sum_probs=28.1
Q ss_pred CCCceeeCCCCCCCcHHHHHHHHHHHHhHcCeeEEeecCC
Q 048042 64 LQLPVVDLDGIKDNKLEDIVDQVRAASETWGFFKVINYGV 103 (209)
Q Consensus 64 ~~IPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~l~nHgI 103 (209)
..||++++....+ .++.+.+.+++.+.-.+.+-|||+
T Consensus 121 ~~ip~~~y~~~g~---~~la~~i~~~l~~~~avll~nHG~ 157 (215)
T 1e4c_P 121 NSIPCAPYATFGT---RELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_dssp SCBCEECCCCTTC---HHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CCcceeeCCCCCc---HHHHHHHHHHhccCCEEEEcCCCc
Confidence 3689998865432 367788888888877888889995
No 19
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=31.21 E-value=28 Score=27.55 Aligned_cols=36 Identities=17% Similarity=0.087 Sum_probs=27.8
Q ss_pred CCcee-eCCCCCCCcHHHHHHHHHHHHhHcCeeEEeecCC
Q 048042 65 QLPVV-DLDGIKDNKLEDIVDQVRAASETWGFFKVINYGV 103 (209)
Q Consensus 65 ~IPvI-Dls~l~~~~~~~~~~~l~~A~~~~GFF~l~nHgI 103 (209)
.||++ ++.... ..++.+.+.+++.+.-.+.+-|||+
T Consensus 117 ~ip~~~~y~~~g---~~ela~~i~~~l~~~~avll~nHG~ 153 (200)
T 2fk5_A 117 EVPVLAPKTVSA---TEEAALSVAEALREHRACLLRGHGA 153 (200)
T ss_dssp CEEEECCSCCSS---SHHHHHHHHHHHHHCSEEEETTTEE
T ss_pred CceEecCCCCCC---cHHHHHHHHHHhCcCCEEEECCCCc
Confidence 69999 775543 2467788888888888888899994
No 20
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=29.97 E-value=31 Score=27.21 Aligned_cols=35 Identities=14% Similarity=0.207 Sum_probs=26.2
Q ss_pred CCceeeCCCCCCCcHHHHHHHHHHHHhHcC---eeEEeecCC
Q 048042 65 QLPVVDLDGIKDNKLEDIVDQVRAASETWG---FFKVINYGV 103 (209)
Q Consensus 65 ~IPvIDls~l~~~~~~~~~~~l~~A~~~~G---FF~l~nHgI 103 (209)
.||+++.. . ...++++.+.+++.+.+ .+.+-|||+
T Consensus 139 ~vp~~~~~-~---g~~~La~~i~~~l~~~~~~~avll~nHG~ 176 (208)
T 2irp_A 139 KIPIFPNE-Q---NIPLLAKEVENYFKTSEDKYGFLIRGHGL 176 (208)
T ss_dssp EEEEECCC-S---CHHHHHHHHHHHHHHCSCCSCEEETTTEE
T ss_pred ceeeecCC-C---CHHHHHHHHHHHHhcCCCceEEEEcCCCC
Confidence 68887763 1 34577888888888765 688889995
No 21
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=27.71 E-value=31 Score=27.95 Aligned_cols=37 Identities=16% Similarity=0.025 Sum_probs=28.4
Q ss_pred CCCceeeCCCCCCCcHHHHHHHHHHHHhHcCeeEEeecCC
Q 048042 64 LQLPVVDLDGIKDNKLEDIVDQVRAASETWGFFKVINYGV 103 (209)
Q Consensus 64 ~~IPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~l~nHgI 103 (209)
..||++++.... ..++.+.+.+++++.-.+.+-|||+
T Consensus 160 ~~v~~~~y~~~g---~~ela~~i~~~l~~~~avll~nHG~ 196 (238)
T 1pvt_A 160 QGISVVEFEKPG---SVELGLKTVEKSEGKDAVLWDKHGV 196 (238)
T ss_dssp SCCEEECCCSTT---CHHHHHHHHHHTSSCSEEEETTSCE
T ss_pred CCceEecCCCCC---cHHHHHHHHHHhccCCEEEEcCCCc
Confidence 368999886543 2467788888888888888889995
No 22
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=26.50 E-value=29 Score=28.87 Aligned_cols=36 Identities=8% Similarity=-0.054 Sum_probs=28.2
Q ss_pred CCceeeCCCCCCCcHHHHHHHHHHHHhHcCeeEEeecCC
Q 048042 65 QLPVVDLDGIKDNKLEDIVDQVRAASETWGFFKVINYGV 103 (209)
Q Consensus 65 ~IPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~l~nHgI 103 (209)
.||++++.... ..++.+.+.+++.+.-.+.+-|||+
T Consensus 179 ~v~v~~y~~~g---~~ela~~i~~~l~~~~avll~nHG~ 214 (274)
T 2v9l_A 179 GVGILPWMVPG---TDAIGQATAQEMQKHSLVLWPFHGV 214 (274)
T ss_dssp CEEECCCCCSS---SHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred ceeEecCCCCC---CHHHHHHHHHHHccCCEEEEcCCCc
Confidence 68888876543 2467788899998888888999995
No 23
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=25.58 E-value=86 Score=26.31 Aligned_cols=51 Identities=20% Similarity=0.103 Sum_probs=36.9
Q ss_pred CCCCCceeeCCCCCCCcHHHHHHHHHHHHhHcCeeEEeec-CCCHHHHHHHHHHHHhh
Q 048042 62 TKLQLPVVDLDGIKDNKLEDIVDQVRAASETWGFFKVINY-GVSLNLIQEMIEGVHKF 118 (209)
Q Consensus 62 ~~~~IPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~l~nH-gI~~eli~~~~~~~~~F 118 (209)
.+..|+=|||+...+ .+..++|..|+.++|...+.|- .++.+.. .+.++.|
T Consensus 18 iGaei~gvdl~~~L~---d~~~~~l~~al~~~gvv~fR~q~~l~~~~~---~~fa~~f 69 (301)
T 3r1j_A 18 IGARVDGVRLGGDLD---DATVEQIRRALLTHKVIFFRHQHHLDDSRQ---LEFARLL 69 (301)
T ss_dssp SCEEEESCCCSTTCC---HHHHHHHHHHHHHHSEEEECCCTTCCHHHH---HHHHHHH
T ss_pred ccceEeCCCccccCC---HHHHHHHHHHHHHCCEEEECCCCCCCHHHH---HHHHHhc
Confidence 455677789984222 4677999999999999999998 7877543 3445555
No 24
>3jsy_A Acidic ribosomal protein P0 homolog; ribonucleoprotein; 1.60A {Methanocaldococcus jannaschii}
Probab=23.47 E-value=1.6e+02 Score=23.50 Aligned_cols=38 Identities=11% Similarity=0.190 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHhHcCeeEEee-cCCCHHHHHHHHHHHH
Q 048042 79 LEDIVDQVRAASETWGFFKVIN-YGVSLNLIQEMIEGVH 116 (209)
Q Consensus 79 ~~~~~~~l~~A~~~~GFF~l~n-HgI~~eli~~~~~~~~ 116 (209)
+.+.+++|.+.+.++..++|++ +|++...++++....+
T Consensus 5 K~~~v~el~e~l~~~~~v~v~~~~gl~~~ql~~lR~~lr 43 (213)
T 3jsy_A 5 KIEEVKTLKGLIKSKPVVAIVDMMDVPAPQLQEIRDKIR 43 (213)
T ss_dssp HHHHHHHHHHHHHHSSEEEEEECCSCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHHHh
Confidence 3456666777777776666654 4676666666665554
No 25
>4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp}
Probab=23.18 E-value=1.3e+02 Score=23.97 Aligned_cols=41 Identities=17% Similarity=0.245 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHhHcCe---eEE---eecCCCHHHHHHHHHHHHhhcc
Q 048042 80 EDIVDQVRAASETWGF---FKV---INYGVSLNLIQEMIEGVHKFNE 120 (209)
Q Consensus 80 ~~~~~~l~~A~~~~GF---F~l---~nHgI~~eli~~~~~~~~~FF~ 120 (209)
.+..+++.+.+++.|+ |.. .+|+|+.+.++.+.+..++-|+
T Consensus 199 ~~~~~~~~~~L~~~g~~v~~~~y~g~gH~i~~~~l~~~~~fL~k~l~ 245 (246)
T 4f21_A 199 EVLGHDLSDKLKVSGFANEYKHYVGMQHSVCMEEIKDISNFIAKTFK 245 (246)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEEESSCCSSCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHCCCCeEEEEECCCCCccCHHHHHHHHHHHHHHhC
Confidence 4566778888888886 333 2699999988888877766554
No 26
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=22.11 E-value=55 Score=27.27 Aligned_cols=37 Identities=14% Similarity=0.071 Sum_probs=28.2
Q ss_pred CCceeeCCCCCCCcHHHHHHHHHHHHhHcCeeEEeecCC
Q 048042 65 QLPVVDLDGIKDNKLEDIVDQVRAASETWGFFKVINYGV 103 (209)
Q Consensus 65 ~IPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~l~nHgI 103 (209)
.||++|+..+.. ..++.+.+.+++.+.-.+.|-|||+
T Consensus 156 ~v~~~~y~~~~~--~~el~~~i~~~l~~~~avlL~nHG~ 192 (273)
T 3ocr_A 156 RVAYHGYEGIAL--DLSERERLVADLGDKSVMILRNHGL 192 (273)
T ss_dssp TEEEECCCCSSC--CHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred CEEEECCCCCCC--CHHHHHHHHHHhCcCCEEEEcCCce
Confidence 588888765421 2466788888998888999999995
No 27
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=22.02 E-value=97 Score=25.00 Aligned_cols=36 Identities=14% Similarity=0.193 Sum_probs=28.9
Q ss_pred HHHHHHHhHcCeeEEeecCCCHHHHHHHHHHHHhhcc
Q 048042 84 DQVRAASETWGFFKVINYGVSLNLIQEMIEGVHKFNE 120 (209)
Q Consensus 84 ~~l~~A~~~~GFF~l~nHgI~~eli~~~~~~~~~FF~ 120 (209)
+++.+.+.+.||+.|.|- ++.+.++++.+...++++
T Consensus 22 ~~~~~~f~~dGyvvl~~~-l~~e~v~~l~~~~~~~~~ 57 (288)
T 2rdq_A 22 AALDSFYEEHGYLFLRNV-LDRDLVKTVAEQMREGLV 57 (288)
T ss_dssp HHHHHHHHHHSEEEECSC-SCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEEeCC-CCHHHHHHHHHHHHHHHH
Confidence 457788999999999874 888888888887776653
No 28
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=21.40 E-value=1e+02 Score=25.18 Aligned_cols=39 Identities=13% Similarity=0.322 Sum_probs=29.2
Q ss_pred HHHHHHHHHHhHcCeeEEeecCCCHHHHHHHHHHHHhhc
Q 048042 81 DIVDQVRAASETWGFFKVINYGVSLNLIQEMIEGVHKFN 119 (209)
Q Consensus 81 ~~~~~l~~A~~~~GFF~l~nHgI~~eli~~~~~~~~~FF 119 (209)
+..++|..++++.++++--|-.+-..++.++.+.+.++|
T Consensus 90 ~~~~~l~~~a~~~~vv~apNfSlGvnll~~l~~~aA~~l 128 (228)
T 1vm6_A 90 EHLQMLRELSKEVPVVQAYNFSIGINVLKRFLSELVKVL 128 (228)
T ss_dssp HHHHHHHHHTTTSEEEECSCCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhCCEEEeccccHHHHHHHHHHHHHHHhc
Confidence 344677777788888888888877777777777777777
No 29
>2vf9_A Coat protein; virion, RNA-binding, capsid protein, structural protein, virus; 3.50A {Bacteriophage PRR1}
Probab=21.04 E-value=19 Score=25.97 Aligned_cols=15 Identities=40% Similarity=0.233 Sum_probs=12.0
Q ss_pred hhcCCcccccccccc
Q 048042 125 VISNDKLKSVDYRVV 139 (209)
Q Consensus 125 ~~sNg~~kS~~HRv~ 139 (209)
--|||+|||++.-|+
T Consensus 51 ktsngrykstlklvv 65 (131)
T 2vf9_A 51 KTSNGRYKSTLKLVV 65 (131)
T ss_dssp ECTTSEEEEEEEEEE
T ss_pred ecCCCceeeeEEEEE
Confidence 458999999987664
No 30
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=20.79 E-value=2.1e+02 Score=23.73 Aligned_cols=37 Identities=19% Similarity=0.211 Sum_probs=28.5
Q ss_pred cHHHHHHHHHHHHhHcCeeEEeec-CCCHHHHHHHHHHH
Q 048042 78 KLEDIVDQVRAASETWGFFKVINY-GVSLNLIQEMIEGV 115 (209)
Q Consensus 78 ~~~~~~~~l~~A~~~~GFF~l~nH-gI~~eli~~~~~~~ 115 (209)
.+.++...+.+||.+.|| .+--. ||+.+=+.++.+.+
T Consensus 171 ~~l~E~~avAka~a~~g~-~lEPTGGIdl~N~~~I~~i~ 208 (249)
T 3m0z_A 171 KHRAEFEAVAKACAAHDF-WLEPTGGIDLENYSEILKIA 208 (249)
T ss_dssp TTHHHHHHHHHHHHHTTC-EEEEBSSCCTTTHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCc-eECCCCCccHhhHHHHHHHH
Confidence 567889999999999999 66655 68876666666554
Done!