Query 048043
Match_columns 742
No_of_seqs 474 out of 3190
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 09:38:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048043.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048043hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i6s_A Subtilisin-like proteas 100.0 1E-118 5E-123 1032.6 46.3 613 117-742 1-645 (649)
2 3vta_A Cucumisin; subtilisin-l 100.0 1E-108 5E-113 952.9 50.8 602 117-741 1-619 (621)
3 1xf1_A C5A peptidase, SCP; hyd 100.0 5.9E-80 2E-84 741.6 45.1 532 129-741 6-605 (926)
4 3afg_A Subtilisin-like serine 100.0 5.8E-62 2E-66 552.6 29.8 365 29-599 34-418 (539)
5 2z2z_A TK-subtilisin precursor 100.0 6.8E-59 2.3E-63 511.2 18.4 339 30-599 2-392 (395)
6 2p4e_P Proprotein convertase s 100.0 2.4E-58 8.1E-63 524.7 6.4 335 30-567 75-423 (692)
7 3t41_A Epidermin leader peptid 100.0 4.2E-56 1.4E-60 501.5 23.7 334 72-600 65-466 (471)
8 1y9z_A Alkaline serine proteas 100.0 4.6E-55 1.6E-59 487.6 21.5 382 124-620 6-437 (441)
9 1r6v_A Subtilisin-like serine 100.0 5E-55 1.7E-59 501.0 22.1 370 27-610 28-450 (671)
10 1gci_A Subtilisin; hydrolase, 100.0 6.9E-53 2.4E-57 438.6 19.1 261 124-598 6-269 (269)
11 1r0r_E Subtilisin carlsberg; h 100.0 5.7E-53 1.9E-57 441.0 17.7 262 124-598 6-274 (274)
12 1dbi_A AK.1 serine protease; h 100.0 2.1E-52 7.1E-57 437.9 21.8 265 123-598 12-279 (280)
13 1to2_E Subtilisin BPN'; serine 100.0 2E-52 7E-57 438.1 18.6 264 124-599 6-276 (281)
14 1thm_A Thermitase; hydrolase(s 100.0 1E-51 3.6E-56 432.5 20.4 258 129-598 20-278 (279)
15 4h6x_A Thiazoline oxidase/subt 100.0 6.4E-53 2.2E-57 457.1 9.1 292 130-598 21-337 (357)
16 2x8j_A Intracellular subtilisi 100.0 4.3E-52 1.5E-56 444.9 15.3 269 123-599 22-311 (327)
17 2ixt_A 36KDA protease; serine 100.0 1.4E-50 4.8E-55 431.5 24.4 285 123-593 7-309 (310)
18 3zxy_A Subtilisin-like protein 100.0 1E-51 3.6E-56 434.1 13.7 264 136-598 3-274 (282)
19 3lxu_X Tripeptidyl-peptidase 2 100.0 1E-49 3.5E-54 474.6 26.1 407 141-742 214-653 (1354)
20 2z30_A TK-subtilisin; thermoco 100.0 8.9E-51 3E-55 434.2 15.2 268 123-599 9-317 (320)
21 2iy9_A SUBA; toxin, shiga, pla 100.0 1.6E-50 5.6E-55 437.7 13.4 274 123-599 24-329 (347)
22 4h6w_A N-terminal cyanobactin 100.0 1.2E-50 4.2E-55 431.4 11.8 270 130-598 11-287 (306)
23 1sh7_A Extracellular subtilisi 100.0 1.3E-48 4.3E-53 409.5 22.5 235 130-567 19-257 (284)
24 1wmd_A Protease; alpha-beta hy 100.0 7.2E-49 2.5E-53 437.2 19.6 288 130-600 11-319 (434)
25 3lpc_A APRB2; protease, subtil 100.0 2E-49 6.9E-54 428.3 14.3 291 129-599 21-337 (340)
26 2b6n_A Proteinase K; S binding 100.0 4.7E-48 1.6E-52 404.6 20.4 237 130-567 21-261 (278)
27 4dzt_A Aqualysin-1, aqualysin- 100.0 9.3E-48 3.2E-52 402.6 19.5 237 129-568 20-260 (276)
28 2pwa_A Proteinase K; structure 100.0 6.6E-48 2.2E-52 403.0 16.7 239 132-593 24-271 (279)
29 1p8j_A Furin precursor; prohor 100.0 1.2E-46 4.1E-51 422.8 23.6 289 129-602 27-333 (471)
30 2oxa_A Extracellular serine pr 100.0 1.9E-46 6.6E-51 433.5 24.8 293 129-603 59-429 (600)
31 2qtw_B Proprotein convertase s 100.0 2.3E-46 7.8E-51 415.8 19.4 269 132-598 18-313 (546)
32 2id4_A Kexin; KEX2, kexin, fur 100.0 4.3E-46 1.5E-50 421.1 19.0 283 129-601 43-344 (503)
33 3f7m_A Alkaline serine proteas 100.0 8E-46 2.7E-50 388.5 17.1 228 132-567 25-261 (279)
34 3hjr_A Extracellular serine pr 100.0 2.8E-44 9.6E-49 417.0 24.4 312 129-600 59-426 (600)
35 1t1e_A Kumamolisin; proenzyme, 99.9 2E-25 6.9E-30 252.6 4.8 96 232-331 274-383 (552)
36 1ga6_A Serine-carboxyl protein 99.9 4.3E-22 1.5E-26 214.8 10.0 99 233-331 90-206 (372)
37 3edy_A Tripeptidyl-peptidase 1 99.0 1.1E-10 3.8E-15 131.1 4.2 97 234-331 263-374 (544)
38 2w2n_P Proprotein convertase s 99.0 4.2E-10 1.4E-14 99.8 5.4 81 26-115 33-113 (114)
39 3cnq_P Subtilisin BPN'; unclea 98.8 7.6E-09 2.6E-13 85.8 8.4 74 28-119 6-79 (80)
40 2qtw_A Proprotein convertase s 98.7 1.2E-08 4.2E-13 91.4 6.6 80 27-115 44-123 (124)
41 1v5i_B POIA1, IA-1=serine prot 98.5 2.5E-07 8.4E-12 75.6 7.4 71 30-115 2-75 (76)
42 3icu_A E3 ubiquitin-protein li 98.5 7.7E-07 2.6E-11 85.6 11.6 92 375-466 82-186 (194)
43 2z30_B TK-subtilisin; thermoco 97.4 0.00023 7.8E-09 55.8 6.1 44 70-114 20-63 (65)
44 2ys4_A Hydrocephalus-inducing 96.5 0.01 3.4E-07 52.8 9.1 73 656-736 40-113 (122)
45 2ek8_A Aminopeptidase; metallo 95.6 0.043 1.5E-06 59.8 10.7 69 386-454 111-182 (421)
46 3iib_A Peptidase M28; YP_92679 94.7 0.14 4.8E-06 56.2 11.3 82 386-467 125-227 (444)
47 3kas_A Transferrin receptor pr 94.2 0.085 2.9E-06 60.3 8.3 68 387-454 129-230 (640)
48 3fed_A Glutamate carboxypeptid 92.9 0.11 3.9E-06 59.9 6.5 70 386-455 151-268 (707)
49 3qbt_B Inositol polyphosphate 89.8 2 7E-05 38.7 10.2 84 657-741 43-137 (140)
50 3lxu_X Tripeptidyl-peptidase 2 88.1 0.21 7.3E-06 60.9 3.0 24 136-159 32-55 (1354)
51 2r39_A FIXG-related protein; s 87.4 2.2 7.7E-05 37.1 8.6 55 658-714 32-86 (118)
52 2e6j_A Hydin protein; PAPD, st 87.4 2.4 8.1E-05 36.3 8.7 68 656-727 25-93 (112)
53 1y9z_A Alkaline serine proteas 86.4 0.45 1.5E-05 52.0 4.2 31 473-511 181-211 (441)
54 2qsv_A Uncharacterized protein 76.8 18 0.00061 35.0 11.3 67 657-727 19-85 (220)
55 3qis_A Inositol polyphosphate 70.9 25 0.00086 37.0 11.4 84 657-741 46-140 (366)
56 1row_A SSP-19, MSP-domain prot 64.7 26 0.00088 29.8 8.1 50 660-712 18-67 (109)
57 3idu_A Uncharacterized protein 62.8 30 0.001 30.3 8.4 52 656-711 32-84 (127)
58 3zyz_A Beta-D-glucoside glucoh 62.3 29 0.00099 40.0 10.5 55 658-713 614-675 (713)
59 3isy_A Bsupi, intracellular pr 62.2 34 0.0012 29.7 8.4 79 655-734 16-112 (120)
60 1m1s_A WR4; structural genomic 60.6 34 0.0012 29.5 8.1 52 659-713 25-76 (116)
61 1msp_A MSP, major sperm protei 59.8 24 0.00082 30.8 7.3 52 658-712 26-77 (126)
62 1z9l_A Vesicle-associated memb 59.6 19 0.00064 31.6 6.6 52 658-712 28-79 (128)
63 3q48_A Chaperone CUPB2; IG fol 57.1 1.1E+02 0.0039 30.1 12.5 58 652-712 37-104 (257)
64 1w8o_A Bacterial sialidase; 3D 56.9 76 0.0026 35.4 12.9 80 646-729 363-443 (601)
65 1wic_A Hypothetical protein ri 54.6 24 0.00083 32.0 6.6 52 658-712 36-87 (152)
66 2cri_A Vesicle-associated memb 51.8 25 0.00085 31.7 6.2 52 658-712 32-83 (147)
67 2x41_A Beta-glucosidase; hydro 48.7 29 0.001 40.0 7.6 57 656-713 614-678 (721)
68 2qsv_A Uncharacterized protein 47.0 45 0.0016 32.0 7.7 69 656-727 133-203 (220)
69 4ep8_B Urease subunit beta; al 44.6 26 0.00088 29.0 4.4 21 653-673 14-34 (101)
70 3d33_A Domain of unknown funct 38.0 1.8E+02 0.0062 24.5 9.2 69 649-726 39-107 (108)
71 4ubp_B Protein (urease (chain 37.9 45 0.0015 28.8 5.0 22 652-673 19-40 (126)
72 4ac7_B Urease subunit beta; hy 37.9 45 0.0015 28.8 5.0 22 652-673 19-40 (126)
73 2xg5_A PAPD, chaperone protein 37.2 1.6E+02 0.0054 28.2 9.7 56 654-711 11-73 (218)
74 1wgl_A TOLL-interacting protei 37.2 20 0.00067 26.9 2.4 37 530-566 3-39 (59)
75 3abz_A Beta-glucosidase I; gly 36.4 1E+02 0.0036 36.1 9.7 43 523-565 619-662 (845)
76 4ay0_A Chaperone protein CAF1M 32.3 1.9E+02 0.0066 27.6 9.4 56 656-714 25-87 (218)
77 2kq1_A BH0266 protein; solutio 29.9 10 0.00035 32.9 -0.2 55 658-712 54-110 (119)
78 4djm_A DRAB; chaperone, PILI; 29.1 2.6E+02 0.0088 27.2 9.8 56 654-712 33-93 (239)
79 1klf_A FIMC chaperone, chapero 29.1 2.7E+02 0.0092 26.3 9.8 56 654-711 11-72 (205)
80 2co7_B SAFB chaperone, putativ 27.7 2.3E+02 0.0077 27.2 9.0 56 654-712 23-83 (221)
81 3sd2_A Putative member of DUF3 27.4 2.7E+02 0.0091 23.2 9.1 66 649-726 35-100 (101)
82 1ni7_A ER75, hypothetical prot 26.3 45 0.0015 30.3 3.4 33 525-558 78-110 (155)
83 3rfr_A PMOB; membrane, oxidore 26.2 3.5E+02 0.012 28.2 10.3 50 656-711 297-368 (419)
84 3g0m_A Cysteine desulfuration 22.3 43 0.0015 29.9 2.4 33 524-557 70-102 (141)
85 1l4i_A SFAE protein; periplasm 22.0 1.7E+02 0.0057 27.8 6.7 53 654-708 11-68 (206)
No 1
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=100.00 E-value=1.4e-118 Score=1032.59 Aligned_cols=613 Identities=40% Similarity=0.694 Sum_probs=558.2
Q ss_pred cCCCCCccCccCCCCCccCCCCCCccEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCccc----cCccccceeecC
Q 048043 117 TTHTPNFLGLHQNSGFWKDSNLGKGVIIGVMDTGITPGHPSFSDEGMPPPPAKWKGKCEFKGAA----CNNKLIGARNFL 192 (742)
Q Consensus 117 ~~~s~~~~g~~~~~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f----~n~ki~~~~~~~ 192 (742)
++++|+|+|+.+..++|..+.+|+||+|||||||||++||+|.+.++++++.+|+|.|+.+.+| ||+|++++++|.
T Consensus 1 Tt~s~~flgl~~~~~~w~~~~~G~gViVaViDTGId~~Hp~f~d~g~~p~p~~wkg~c~~g~~f~~~~cN~kiig~~~f~ 80 (649)
T 3i6s_A 1 TTHTSDFLKLNPSSGLWPASGLGQDVIVAVLDSGIWPESASFQDDGMPEIPKRWKGICKPGTQFNASMCNRKLIGANYFN 80 (649)
T ss_dssp CCSHHHHTTCCSSSSHHHHHGGGTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCBTTBCTTSCCSSEEEEEECC
T ss_pred CCCChHHcCCCCchhhHhccCCCCCCEEEEEccCCCCCChhhccCCCCCCccccccccccCccccccccccceeeeEecc
Confidence 4678999999877889999999999999999999999999999999999999999999999888 999999999997
Q ss_pred CCC---------CCCCCCCCCCCchhhhhhhcccccCCCcccccCCcceeeecCcceEEEEEEeccCCCCHHHHHHHHHH
Q 048043 193 QGS---------TGEPPLDDEGHGTHTATTAAGNFVNGANVFGQADGTAVGIAPLAHLAIYKVCDFDGCSESRVYAAMDT 263 (742)
Q Consensus 193 ~~~---------~~~~~~d~~gHGThVAGiiaG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~ 263 (742)
.+. +..+++|..||||||||||||+..++.+++|++.|.+.||||+|+|++||+++..|+..+++++||+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~D~~GHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~Ai~~ 160 (649)
T 3i6s_A 81 KGILANDPTVNITMNSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFNEGTFTSDLIAAMDQ 160 (649)
T ss_dssp HHHHHHCTTCCCTTCSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEETTEECHHHHHHHHHH
T ss_pred CcccccccccccCCCCCCCCCCcHHHHHHHHhCCCCcCccccccccCceeEECCCCEEEEEeccCCCCCCHHHHHHHHHH
Confidence 432 23567899999999999999998888888888888899999999999999999888999999999999
Q ss_pred hhhCCCcEEEEccCCCCCCCCCCHHHHHHHHhhcCCcEEEEecCCCCCCCCCCCCCCCceEEecccCCcceeEEEEEeCC
Q 048043 264 AIDDGVDVLSLSLGAASVPFFEDPLAIGSFSAIQKEIFVSCSAGNEGPNPSTSSNEAPWILSVGASTTDRSIVASVELGN 343 (742)
Q Consensus 264 a~~~g~~VIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~~ 343 (742)
|+++|+||||||||+...++..+++..++++|.++|++||+||||+|+...++++.+||+|+|||++.||.|...+.+++
T Consensus 161 A~~~gvdVIn~SlG~~~~~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~ap~vitVgAst~dr~f~~~~~lgn 240 (649)
T 3i6s_A 161 AVADGVDMISISYGYRFIPLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVASGHTDRTFAGTLTLGN 240 (649)
T ss_dssp HHHTTCSEEEECCCCCSCCGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCCCTTSEEEEEEECSCEEEEEEEETT
T ss_pred HHHcCCCEEEeCCccCCcccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCCCCceEEEeeeecccceeeEEEeCC
Confidence 99999999999999987777889999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeEeeeeccCCCCCCCCceeEEecCCCCCCCCCCcCCCCCC-CCc--cceEEEeecCCcchhhhhHHHhhcCCeEEEEe
Q 048043 344 QAVYDGEALFQPKDFPSKQFPLIYPGANGNVSSAQCSPGSLS-SNI--RGKLVLCERGGGERTKKGQVVKDAGGIGMILM 420 (742)
Q Consensus 344 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~-~~~--~g~iv~~~~g~~~~~~~~~~~~~~g~~~~i~~ 420 (742)
++++.+.+++..... ...+|++|.. ....|.+..++ .++ +|||++|.|+.|.+.+|..+++.+|+.|+|++
T Consensus 241 g~~~~g~sl~~~~~~-~~~~plv~~~-----~~~~C~~~~l~~~~vdl~GkIvlc~~g~~~~~~k~~~~~~~Ga~g~i~~ 314 (649)
T 3i6s_A 241 GLKIRGWSLFPARAF-VRDSPVIYNK-----TLSDCSSEELLSQVENPENTIVICDDNGDFSDQMRIITRARLKAAIFIS 314 (649)
T ss_dssp SCEEEEECCCSSCBC-EEEEEEECCT-----TTTTCCCHHHHTTSSSGGGCEEEECCCSCHHHHHHHHHHHTCSEEEEEC
T ss_pred CcEEeeeecccCccc-CcceeeEecc-----cccccccccccccccccCCcEEEEeCCCccHHHHHHHHHhcCceEEEEe
Confidence 999999999887643 6679999976 35679888777 666 99999999999999999999999999999999
Q ss_pred ccCCCCccccCCCccccEEEEehhhHHHHHHHHhcCCCCeEEEEeceeEecccCCCccccccCCCCCCCCCCCcccceEe
Q 048043 421 NDKLNGYSTLADPHLLPAVHVSYAAGESIKAYINSTSSPNATIVFKGTVIGKKSTPELASFSSRGPSIASPGILKPDIIG 500 (742)
Q Consensus 421 ~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~A 500 (742)
|+. .....+.+.+|.+.|+..+|..|++|++++.+++++|.+..+..+..+.+.+++||||||+...++++||||+|
T Consensus 315 n~~---~~~~~~~~~~P~~~v~~~~g~~i~~yi~s~~~~~a~i~~~~t~~~~~~~~~va~FSSrGP~~~~~~ilKPDI~A 391 (649)
T 3i6s_A 315 EDP---GVFRSATFPNPGVVVNKKEGKQVINYVKNSVTPTATITFQETYLDTKPAPVVAASSARGPSRSYLGISKPDILA 391 (649)
T ss_dssp CCG---GGGGCCCCCSCEEEECHHHHHHHHHHHHTCSSCEEEEEEEEEECCCSSCCEECTTSCCSSCTTCTTSCSCCEEE
T ss_pred cCc---cccccccCcCCEEEEcHHHHHHHHHHHhcCCCceEEEeecceeeccCCCCcccccCCCCCCCCCCCccCCeEEe
Confidence 986 44566788999999999999999999999999999999999999888999999999999999888999999999
Q ss_pred cCCcEEeccCCCccC----CCC-CcccceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHcccccccCCCCcccc
Q 048043 501 PGVNILAAWPFSVEN----KTN-TKSTFNMVAGTSMSCPHLSGVAALLKSAHPDWSPAAIKSAIMTTADIVSLDGKPIVD 575 (742)
Q Consensus 501 PG~~I~sa~~~~~~~----~~~-~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~g~~~~~ 575 (742)
||++|+++|+....+ .+. +...|..+||||||||||||+||||||+||+|+|++||++||+||++++..+.++.+
T Consensus 392 PG~~Ilsa~~~~~~~~~~~~d~~~~~~y~~~SGTSMAaPhVAGvaALlks~~P~~Spa~IksaLmtTA~~~~~~g~~i~~ 471 (649)
T 3i6s_A 392 PGVLILAAYPPNVFATSIGTNILLSTDYILESGTSMAAPHAAGIAAMLKAAHPEWSPSAIRSAMMTTADPLDNTRKPIKD 471 (649)
T ss_dssp ECSSEEEECCTTSCCEEETTTEEECCSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCBCTTSSBCEE
T ss_pred CCCCeEeecCCCCCccccccccccccceecccccccccHHHHHHHHHHHHhCCCCCHHHHHHHHhcccccccCCCCcccc
Confidence 999999999874311 111 336899999999999999999999999999999999999999999999999999887
Q ss_pred CC-CCCCCCCcccccccCcCCcCCCCccccCCCCCcccccccCCCCccceeEEEeeeee--ccCCCCCCcccCCCCceee
Q 048043 576 QR-LLPADMFAVGAGHVNPSSANDPGLIYDIQPDDYIPYLCGLNYSDQHVQDIVMINVQ--CSKVSGIAETELNYPSFSV 652 (742)
Q Consensus 576 ~~-~~~~~~~~~G~G~vd~~~Al~~~lv~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ln~ps~~~ 652 (742)
.. +.+++++.||+|+||+.+|++|+||||++.+||++|||++||+.++|+.|++.++. |+. ...+||||||++
T Consensus 472 ~~~~~~a~~~~~GaG~vn~~~A~~pGLvyd~~~~dy~~flc~~~y~~~~i~~~~~~~~~~~C~~----~~~~lNyPs~~~ 547 (649)
T 3i6s_A 472 SDNNKAATPLDMGAGHVDPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFKTIARSSASHNCSN----PSADLNYPSFIA 547 (649)
T ss_dssp TTTSSBCCHHHHTTCBCCHHHHTCCSEECCCCHHHHHHHHHTTCCCHHHHHHHHTTTSCC-CCC----CCCCCCCSSEEE
T ss_pred cccCCcCCcCCCCeeeeCHHHhcCccccccCCchhHHHhhhcCCCCcccceeeecCCCcCCCCC----chhhcCCCcEEe
Confidence 63 66888999999999999999999999999999999999999999999999988777 975 567999999999
Q ss_pred ee-CCcc-----EEEEEEEEeeCCCCceEEEEEECCCCcEEEEEcCeeEecCCCcEEEEEEEEEEccCCCCceEEEEEEE
Q 048043 653 IL-GSTS-----QTYNRTVTNVGQAESSYTHKIVAPEGVTVTVEPENISFTKKNQKAIYSITFTRSQKTSALFAQGYLSW 726 (742)
Q Consensus 653 ~~-~~~~-----~~~~~tv~n~~~~~~~y~~~~~~p~~~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~G~i~~ 726 (742)
.+ .... ++|+|||||||+...+|++.+..|.|++|+|+|++|+|.+.+|+++|+|+|+........|.||+|+|
T Consensus 548 ~~~~~~~~~~~~~~~~Rtvtnvg~~~~~y~~~v~~p~g~~v~v~P~~l~f~~~~~~~~f~v~~~~~~~~~~~~~fg~l~w 627 (649)
T 3i6s_A 548 LYSIEGNFTLLEQKFKRTVTNVGKGAATYKAKLKAPKNSTISVSPQILVFKNKNEKQSYTLTIRYIGDEGQSRNVGSITW 627 (649)
T ss_dssp EECCSSCCCCEEEEEEEEEEECC--CEEEEEEEECCTTEEEEEESSEEEECC-CCEEEEEEEEEECCC---CCCEEEEEE
T ss_pred ecccCCCCccceEEEEEEEEEeCCCCcEEEEEEecCCCCEEEEECCEEEEecCCCEEEEEEEEEecccCCCceEEEEEEE
Confidence 87 4545 89999999999988999999999999999999999999988999999999998755344789999999
Q ss_pred Ec--CceEEEEeEEEEeC
Q 048043 727 VS--TKHTVRSPIAVRFQ 742 (742)
Q Consensus 727 ~~--~~~~v~~p~~v~~~ 742 (742)
++ +.|.||+||+|++.
T Consensus 628 ~~~~~~h~vrsPi~v~~~ 645 (649)
T 3i6s_A 628 VEQNGNHSVRSPIVTSPI 645 (649)
T ss_dssp EETTSCCEEEEEEEEEEC
T ss_pred EcCCCCeEEEEeEEEEEc
Confidence 98 99999999999874
No 2
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=100.00 E-value=1.4e-108 Score=952.91 Aligned_cols=602 Identities=42% Similarity=0.699 Sum_probs=505.4
Q ss_pred cCCCCCccCccCCCCCccCCCCCCccEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCccc-cCccccceeecCCCC
Q 048043 117 TTHTPNFLGLHQNSGFWKDSNLGKGVIIGVMDTGITPGHPSFSDEGMPPPPAKWKGKCEFKGAA-CNNKLIGARNFLQGS 195 (742)
Q Consensus 117 ~~~s~~~~g~~~~~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f-~n~ki~~~~~~~~~~ 195 (742)
++++|+|+|+++ .+|.+..+|+||+|||||||||++||+|+++++++++.+|+|.|+.+.+| ||+|++++++|..+.
T Consensus 1 tt~s~~flGl~~--~~~~~~~~G~gViVgViDTGId~~Hp~f~d~g~~~~~~~w~g~~~~~~~~~~n~k~ig~~~~~~~~ 78 (621)
T 3vta_A 1 TTRSWDFLGFPL--TVPRRSQVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSNNFRCNRKIIGARSYHIGR 78 (621)
T ss_dssp CCSHHHHTTCCT--TCCCCHHHHTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCSSSCCCCSSEEEEEECCCSS
T ss_pred CCCChhHcCCCc--cccccCCCCCCCEEEEEecCCCCCChhhcCCCCCCcccccccccccCCCcccCcceeeeeecccCC
Confidence 478899999964 68889999999999999999999999999999999999999999999999 999999999998764
Q ss_pred C-----CCCCCCCCCCchhhhhhhcccccCCCcccccCCcceeeecCcceEEEEEEeccCCCCHHHHHHHHHHhhhCCCc
Q 048043 196 T-----GEPPLDDEGHGTHTATTAAGNFVNGANVFGQADGTAVGIAPLAHLAIYKVCDFDGCSESRVYAAMDTAIDDGVD 270 (742)
Q Consensus 196 ~-----~~~~~d~~gHGThVAGiiaG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~~g~~ 270 (742)
+ ..+++|++||||||||||||+...+.+..|.+.|.++||||+|+|++||+|++.|+..+++++||+||+++|+|
T Consensus 79 ~~~~~~~~~p~D~~GHGTHvAgi~AG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g~~~~di~~a~~~a~~~g~d 158 (621)
T 3vta_A 79 PISPGDVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWNDGCSDTDILAAYDDAIADGVD 158 (621)
T ss_dssp SCCTTCCSSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSCTTSEEEEEECEETTEECHHHHHHHHHHHHHHTCS
T ss_pred ccCCCCCCCCCCCCcCHHHHHHHHhCcCCCCccccccccccEEEECCCCEEEEEEeecCCCCCHHHHHHHHHHHHHhCCC
Confidence 2 45678999999999999999988888888888888999999999999999999889999999999999999999
Q ss_pred EEEEccCCCC-CCCCCCHHHHHHHHhhcCCcEEEEecCCCCCCCCCCCCCCCceEEecccCCcceeEEEEEeCCCeeEee
Q 048043 271 VLSLSLGAAS-VPFFEDPLAIGSFSAIQKEIFVSCSAGNEGPNPSTSSNEAPWILSVGASTTDRSIVASVELGNQAVYDG 349 (742)
Q Consensus 271 VIn~SlG~~~-~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~~g~~~~~ 349 (742)
|||||||+.. ..+..++++.++++|.++|+++|+||||+|+...++++.+||+++|++++.++.+...+.++++..+.+
T Consensus 159 Vin~SlG~~~~~~~~~~~~~~~~~~a~~~Gi~vv~aAGN~g~~~~t~~~~a~~~~~v~ast~d~~~~~~~~~~~~~~~~~ 238 (621)
T 3vta_A 159 IISLSVGGANPRHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTMDRKFVTQVQIGNGQSFQG 238 (621)
T ss_dssp EEEECCCCCCGGGGGGCTHHHHHHHHHTTTCEEEEECCSCCSSTTCCCCCCTTSEEEEEECCSEEEEEEEEETTSCEEEE
T ss_pred EEEecCCCCCCCCcCCcHHHHHHHHHHHCCCEEEEeCCCCCCCCcccCCCCCCceeEEEeeccccceeeEEeccCceeee
Confidence 9999999875 346678899999999999999999999999999999999999999999999999999999999999998
Q ss_pred eeccCCCCCCCCceeEEecCCCCCC-----CCCCcCCCCCC-CCccceEEEeecCCcchhhhhHHHhhcCCeEEEEeccC
Q 048043 350 EALFQPKDFPSKQFPLIYPGANGNV-----SSAQCSPGSLS-SNIRGKLVLCERGGGERTKKGQVVKDAGGIGMILMNDK 423 (742)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~c~~~~~~-~~~~g~iv~~~~g~~~~~~~~~~~~~~g~~~~i~~~~~ 423 (742)
.+++... ...+++++....... ....|.+..++ .+++|||++|.++ +..+..+....|+.+++++++.
T Consensus 239 ~s~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~gkivl~~~~---~~~~~~~~~~~Ga~gvi~~~~~ 312 (621)
T 3vta_A 239 VSINTFD---NQYYPLVSGRDIPNTGFDKSTSRFCTDKSVNPNLLKGKIVVCEAS---FGPHEFFKSLDGAAGVLMTSNT 312 (621)
T ss_dssp BCCCCSC---CEEECEEETTTSCCTTCCHHHHTTTCTTCSCGGGTTTSEEECSSC---CCHHHHHHHHTTCSEEEEECSC
T ss_pred eecccCC---CcccccccccccccccccccccccccccccccccccceEEEEecC---CChhHHhhhhcceeEEEEEecC
Confidence 8876543 345666665543321 34568888888 8999999999865 3456677788899999998875
Q ss_pred CCCccccCCCccccEEEEehhhHHHHHHHHhcCCCCeEEEEeceeEecccCCCccccccCCCCCCCCCCCcccceEecCC
Q 048043 424 LNGYSTLADPHLLPAVHVSYAAGESIKAYINSTSSPNATIVFKGTVIGKKSTPELASFSSRGPSIASPGILKPDIIGPGV 503 (742)
Q Consensus 424 ~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~ 503 (742)
.. ..+.+.+|...++..++..++.++.....+.+.+.... .......+.++.||||||+...++++||||+|||+
T Consensus 313 ~~----~~~~~~lP~~~v~~~~g~~i~~~~~~~~~~~a~~~~~~-~~~~~~~~~va~FSSrGP~~~~~~ilKPDI~APG~ 387 (621)
T 3vta_A 313 RD----YADSYPLPSSVLDPNDLLATLRYIYSIRSPGATIFKST-TILNASAPVVVSFSSRGPNRATKDVIKPDISGPGV 387 (621)
T ss_dssp CS----SCCCCSSSEEEECHHHHHHHHHHHHHHSSCCEEECCCE-EEECTTCCCBCTTSCCCSCTTCTTSCSCCEEEECS
T ss_pred CC----cccccccceEEECHHHHHHHHHHHhccCCcceEEecce-EeccCCCCceeeecCCCCCCCCCCeeccccccCCc
Confidence 43 34567899999999999999999999888888774443 34456788999999999998888999999999999
Q ss_pred cEEeccCCCc-cCCCCCcccceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHcccccccCCCCccccCCCCCCC
Q 048043 504 NILAAWPFSV-ENKTNTKSTFNMVAGTSMSCPHLSGVAALLKSAHPDWSPAAIKSAIMTTADIVSLDGKPIVDQRLLPAD 582 (742)
Q Consensus 504 ~I~sa~~~~~-~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~ 582 (742)
+|+|+++... .........|..+||||||||||||+||||||+||+|+|++||++||+||++++..+ .+..
T Consensus 388 ~Ilsa~~~~~~~~~~~~~~~y~~~SGTSMAaPhVAGvaALl~q~~P~~spa~IksaLmtTA~~~~~~~--------~~~~ 459 (621)
T 3vta_A 388 EILAAWPSVAPVGGIRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSALMTTASPMNARF--------NPQA 459 (621)
T ss_dssp SEEEECCSSSCBTTBCCCCSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTCBCCCTTT--------CTTT
T ss_pred ceEeecCccccccCcCCCCcceEecCccccchhhhhHHHHHHHHCCCCCHHHHHHHHHhcCCcccccC--------CCCC
Confidence 9999998654 222334578999999999999999999999999999999999999999999886554 3567
Q ss_pred CCcccccccCcCCcCCCCccccCCCCCcccccccCCCCccceeEEEeeeeeccCCCCCCcccCCCCceeeeeC---CccE
Q 048043 583 MFAVGAGHVNPSSANDPGLIYDIQPDDYIPYLCGLNYSDQHVQDIVMINVQCSKVSGIAETELNYPSFSVILG---STSQ 659 (742)
Q Consensus 583 ~~~~G~G~vd~~~Al~~~lv~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~ps~~~~~~---~~~~ 659 (742)
++.||+|+||+.+|++|+||||++.+||+.|+|+++|+.++++.+++....|+........+||||||++.+. ..++
T Consensus 460 ~~~~GaG~v~~~~A~~pGLvyd~~~~dy~~~lc~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lN~pS~~v~~~~~~~~~~ 539 (621)
T 3vta_A 460 EFAYGSGHVNPLKAVRPGLVYDANESDYVKFLCGQGYNTQAVRRITGDYSACTSGNTGRVWDLNYPSFGLSVSPSQTFNQ 539 (621)
T ss_dssp HHHHTTCBCCHHHHSCCSEECCCCGGGCC-----------------------------CGGGSCCSSEEEECCSSCCEEE
T ss_pred chhcCCCccCHHHhcCCCeEeecccchhhhhhcccCCCchhheeeeccccccCCCCcCcccccccccEEEEccCCCceEE
Confidence 8899999999999999999999999999999999999999999999999999876667788999999999643 3478
Q ss_pred EEEEEEEeeCCCCceEEEEEECCCCcEEEEEcCeeEecCCCcEEEEEEEEEEccCCCCceEEEEEEEEcCceEEEEeEEE
Q 048043 660 TYNRTVTNVGQAESSYTHKIVAPEGVTVTVEPENISFTKKNQKAIYSITFTRSQKTSALFAQGYLSWVSTKHTVRSPIAV 739 (742)
Q Consensus 660 ~~~~tv~n~~~~~~~y~~~~~~p~~~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~G~i~~~~~~~~v~~p~~v 739 (742)
+++|||||+|....+|++++..|.|++|+|+|++|+|++.||+++|+|+|+.... +.++||+|+|+|+.|.||+||+|
T Consensus 540 t~~rtvtnvg~~~~ty~~~v~~p~gv~v~V~P~~l~f~~~~~~~~~~vt~~~~~~--~~~~~g~l~w~d~~h~Vr~Pi~v 617 (621)
T 3vta_A 540 YFNRTLTSVAPQASTYRAMISAPQGLTISVNPNVLSFNGLGDRKSFTLTVRGSIK--GFVVSASLVWSDGVHYVRSPITI 617 (621)
T ss_dssp EEEEEEEECSSSCEEEEEEEECCSSEEEEEESSEEEECSTTCEEEEEEEEEECCC--SSEEEEEEEEECSSCCCEEEEEE
T ss_pred EEEEEEEccCCCCeEEEEEEECCCCcEEEEecCEEEEcCCCcEEEEEEEEEecCC--CceEEEEEEEEcCCEEEEeCEEE
Confidence 9999999999999999999999999999999999999999999999999986532 37999999999999999999999
Q ss_pred Ee
Q 048043 740 RF 741 (742)
Q Consensus 740 ~~ 741 (742)
+.
T Consensus 618 ~~ 619 (621)
T 3vta_A 618 TS 619 (621)
T ss_dssp EC
T ss_pred EE
Confidence 86
No 3
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=100.00 E-value=5.9e-80 Score=741.55 Aligned_cols=532 Identities=23% Similarity=0.348 Sum_probs=419.5
Q ss_pred CCCCccCCCCCCccEEEEEcccCCCCCCCCCCCCCCCCCCccccccccC--------------ccccCccccceeecCCC
Q 048043 129 NSGFWKDSNLGKGVIIGVMDTGITPGHPSFSDEGMPPPPAKWKGKCEFK--------------GAACNNKLIGARNFLQG 194 (742)
Q Consensus 129 ~~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g--------------~~f~n~ki~~~~~~~~~ 194 (742)
+..+|.++++|+||+|||||||||++||+|.+. ..|++.|..+ ..+||+|++++++|.++
T Consensus 6 ~~~~w~~~~~G~GV~VaVIDTGId~~Hp~f~~~------~~~~~~~~~~~~~~~~~~~~g~~~g~~~n~Kii~~~~~~~~ 79 (926)
T 1xf1_A 6 VKTLQEKAGKGAGTVVAVIDAGFDKNHEAWRLT------DKTKARYQSKEDLEKAKKEHGITYGEWVNDKVAYYHDYSKD 79 (926)
T ss_dssp CHHHHHHHCSCTTCEEEEEESCCTTCCCCCSCC------SCCCSSCCHHHHHHHHHHTTTCCCCBCCSSSCCEEEESCCC
T ss_pred cHHHHhccCCCCCcEEEEEecCCCCCCHhHcCC------CCCcccccchhhhcccccccCcccccccCcccceeeccccC
Confidence 345999999999999999999999999999853 3465555321 11499999999999876
Q ss_pred CCCCCCCCCCCCchhhhhhhcccccCCCcccccCCcceeeecCcceEEEEEEeccCC--CCHHHHHHHHHHhhhCCCcEE
Q 048043 195 STGEPPLDDEGHGTHTATTAAGNFVNGANVFGQADGTAVGIAPLAHLAIYKVCDFDG--CSESRVYAAMDTAIDDGVDVL 272 (742)
Q Consensus 195 ~~~~~~~d~~gHGThVAGiiaG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g--~~~~~i~~ai~~a~~~g~~VI 272 (742)
. ...|+.||||||||||||+...+.+. .+.+.||||+|+|+++|++++.+ +..+++++||+||+++|++||
T Consensus 80 ~---~~~D~~gHGThVAgiiAg~~~~~~~~----~~~~~GvAP~A~l~~~kv~~~~g~~~~~~~i~~Ai~~Ai~~gvdVI 152 (926)
T 1xf1_A 80 G---KTAVDQEHGTHVSGILSGNAPSETKE----PYRLEGAMPEAQLLLMRVEIVNGLADYARNYAQAIRDAINLGAKVI 152 (926)
T ss_dssp S---CCCCSSTTTTHHHHSSCCCCCCCCSC----SCCTTTTCTTSEEEEEECCCCSCHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred C---CCCCCCCcHHHHHHHHhCCCccCccc----CCceEEECCCCEEEEEEeecCCCCCCcHHHHHHHHHHHHHhCCcEE
Confidence 3 33389999999999999986543321 24468999999999999998776 456789999999999999999
Q ss_pred EEccCCCC--CCCCCCHHHHHHHHhhcCCcEEEEecCCCCCCC---------------CCCCCCCCceEEecccCCccee
Q 048043 273 SLSLGAAS--VPFFEDPLAIGSFSAIQKEIFVSCSAGNEGPNP---------------STSSNEAPWILSVGASTTDRSI 335 (742)
Q Consensus 273 n~SlG~~~--~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~---------------~~~~~~~p~vitVga~~~~~~~ 335 (742)
|||||+.. .....+.+..++..|.++|++||+||||+|... ...++.+||+|+|||++.++.+
T Consensus 153 n~SlG~~~~~~~~~~~~~~~ai~~A~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~~tv~~PA~~~~vitVgA~~~~~~~ 232 (926)
T 1xf1_A 153 NMSFGNAALAYANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDYGVVGTPAAADSTLTVASYSPDKQL 232 (926)
T ss_dssp EECCSSCCCTTCCCCHHHHHHHHHHHHTTCEEEEECCSCCBTTCTTSCCBTTCCCCBCCCSCTTTCCSEEEEEEBCSEEE
T ss_pred EECCCCCCCCccccccHHHHHHHHHHhCCcEEEEeCCCCCCcCCccccccccCCCcceecCcccCCceEEEecccccccc
Confidence 99999864 234566788889999999999999999999632 1233458999999999999999
Q ss_pred EEEEEe-CCCeeEeeeeccCCCCC-CCCceeEEecCCCCCCCCCCcCCCCCCCCccceEEEeecCCcchhhhhHHHhhcC
Q 048043 336 VASVEL-GNQAVYDGEALFQPKDF-PSKQFPLIYPGANGNVSSAQCSPGSLSSNIRGKLVLCERGGGERTKKGQVVKDAG 413 (742)
Q Consensus 336 ~~~~~~-~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~g 413 (742)
...+.+ +++....+.+++...++ ....+|+++... .|.+..+ .+++|||++|+|+.|.+.+|..+++.+|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~-------g~~~~~~-~~v~Gkivl~~rg~~~~~~k~~~~~~~G 304 (926)
T 1xf1_A 233 TETVRVKTADQQDKEMPVLSTNRFEPNKAYDYAYANR-------GTKEDDF-KDVKGKIALIERGDIDFKDKIAKAKKAG 304 (926)
T ss_dssp EEEEEEECTTSCEEEEEEEEESCCCTTCCEEEEECTT-------SCSTTTT-TTCTTSEEEEECCSSCHHHHHHHHHHTT
T ss_pred ccceEEEcCCCcceeeEEEecCCCCCCceEEEEECCC-------CCCccch-hhcCCeEEEEECCCCCHHHHHHHHHhCC
Confidence 888887 55544444444332222 356799998764 3765444 7899999999999999999999999999
Q ss_pred CeEEEEeccCCCCcc-ccCCCccccEEEEehhhHHHHHHHHhcCCCCeEEEEeceeE--ecccCCCccccccCCCCCCCC
Q 048043 414 GIGMILMNDKLNGYS-TLADPHLLPAVHVSYAAGESIKAYINSTSSPNATIVFKGTV--IGKKSTPELASFSSRGPSIAS 490 (742)
Q Consensus 414 ~~~~i~~~~~~~~~~-~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~a~fSs~Gp~~~~ 490 (742)
+.++|++++...... ......++|...++..++..|+. ++..++++..+. +.....+.++.||||||+.
T Consensus 305 a~gvi~~n~~~~~~~~~~~~~~~iP~~~i~~~~g~~l~~------~~~~ti~~~~~~~~~~~~~~~~~a~FSSrGp~~-- 376 (926)
T 1xf1_A 305 AVGVLIYDNQDKGFPIELPNVDQMPAAFISRKDGLLLKD------NPQKTITFNATPKVLPTASGTKLSRFSSWGLTA-- 376 (926)
T ss_dssp CSEEEEECSSTTCCCEECCCSTTCCEEEECHHHHHHHHH------CSSCEEEECSSCEEEECSSCSBCCTTSCCCBCT--
T ss_pred CcEEEEEecCCCCcccccCccccccEEEEeHHHHHHHHh------CCceEEEecccceecccCCcceeccccCCCCCC--
Confidence 999999988654332 23346789999999999998874 345667766543 4556678999999999996
Q ss_pred CCCcccceEecCCcEEeccCCCccCCCCCcccceeeccccchhHHHHHHHHHHH----hhCCCCCHHH----HHHHHHcc
Q 048043 491 PGILKPDIIGPGVNILAAWPFSVENKTNTKSTFNMVAGTSMSCPHLSGVAALLK----SAHPDWSPAA----IKSAIMTT 562 (742)
Q Consensus 491 ~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~----q~~p~~s~~~----ik~~L~~T 562 (742)
++++||||+|||++|+++++. +.|..+||||||||||||+||||+ +.||+|+|+| ||++||+|
T Consensus 377 ~~~lKPDI~APG~~I~sa~~~---------~~y~~~SGTSMAaPhVAG~aALl~q~~k~~~P~~sp~~~~~~Iks~L~~T 447 (926)
T 1xf1_A 377 DGNIKPDIAAPGQDILSSVAN---------NKYAKLSGTSMSAPLVAGIMGLLQKQYETQYPDMTPSERLDLAKKVLMSS 447 (926)
T ss_dssp TSCBSCCEEEECCCEEESSSC---------SSSCEEESCTTHHHHHHHHHHHHHHHHHHSSSSSHHHHHHHHHHHHHHHH
T ss_pred CCccCceEECCCCCEEeeccC---------CcceecCccchhHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHhc
Confidence 789999999999999999987 789999999999999999999996 4699999997 99999999
Q ss_pred cccccCCCCccccCCCCCCCCCcccccccCcCCcCCCCccccCCCCCcccccccCCCCccceeEEEeeeeeccCCCCCCc
Q 048043 563 ADIVSLDGKPIVDQRLLPADMFAVGAGHVNPSSANDPGLIYDIQPDDYIPYLCGLNYSDQHVQDIVMINVQCSKVSGIAE 642 (742)
Q Consensus 563 A~~~~~~g~~~~~~~~~~~~~~~~G~G~vd~~~Al~~~lv~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (742)
|+++...+. ..++++++||+|+||+.+|+++.+ |+|..+++...
T Consensus 448 A~~~~~~~~------~~~~~~~~~G~G~vn~~~A~~~~~-----------~l~~~~~~~~~------------------- 491 (926)
T 1xf1_A 448 ATALYDEDE------KAYFSPRQQGAGAVDAKKASAATM-----------YVTDKDNTSSK------------------- 491 (926)
T ss_dssp SBCCEEGGG------TEECCHHHHTTCBCCHHHHHHCSE-----------EEEESSSSCSC-------------------
T ss_pred CCCcccCCC------CccCChhccCCCccCHHHhcCCCe-----------EEEcCCCCcce-------------------
Confidence 998754321 224677899999999999999844 57876554322
Q ss_pred ccCCCCceeeeeCCccEEEEEEEEeeCCCC--ceEEEEEEC--CCCcEEEEEcCeeEecCC-------CcEEEEEEEEEE
Q 048043 643 TELNYPSFSVILGSTSQTYNRTVTNVGQAE--SSYTHKIVA--PEGVTVTVEPENISFTKK-------NQKAIYSITFTR 711 (742)
Q Consensus 643 ~~ln~ps~~~~~~~~~~~~~~tv~n~~~~~--~~y~~~~~~--p~~~~v~v~p~~~~~~~~-------g~~~~~~v~~~~ 711 (742)
+.+.......+++|||+|+|+.+ .+|++.+.. |.+..++|+|..|.|... ||+++|+|+|++
T Consensus 492 -------i~l~~~~~~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~~l~~~~~~~vtv~ag~~~~~~vt~~~ 564 (926)
T 1xf1_A 492 -------VHLNNVSDKFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPKVLYETSWQKITIPANSSKQVTVPIDA 564 (926)
T ss_dssp -------EEEEEECSEEEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEEEEEECCCEEEEECTTEEEEEEEEEEC
T ss_pred -------eeccccCccEEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEeccceeEeccCCeEEECCCCEEEEEEEEEc
Confidence 22222233688999999999854 567777764 678888888876655433 999999999998
Q ss_pred cc--------CCCCceEEEEEEEE--cCceE-EEEeEEEEe
Q 048043 712 SQ--------KTSALFAQGYLSWV--STKHT-VRSPIAVRF 741 (742)
Q Consensus 712 ~~--------~~~~~~~~G~i~~~--~~~~~-v~~p~~v~~ 741 (742)
+. .+.+.++||+|+|+ ++.|. ||+||++..
T Consensus 565 ~~~~~~~~~~~~~~~~~~G~i~~~~~~~~~~~v~~P~~~~~ 605 (926)
T 1xf1_A 565 SRFSKDLLAQMKNGYFLEGFVRFKQDPTKEELMSIPYIGFR 605 (926)
T ss_dssp HHHHHHHHHHSTTCEEEEEEEEEESSTTSCCCEEEEEEEEE
T ss_pred CccchhhcccccCCcEEEEEEEEEeCCCCCCEEEeeeEEEe
Confidence 62 13336899999999 56564 999999863
No 4
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=100.00 E-value=5.8e-62 Score=552.61 Aligned_cols=365 Identities=31% Similarity=0.485 Sum_probs=290.6
Q ss_pred CCceEEEEECCCCCCCCcchhccchHHHHHhhcccccccCCCCCCceEEEEcceeeEEEEEcCHHHHHHh----------
Q 048043 29 SLETYIVYVRKPDQDQATTSIKLDLDSWYHSFLPVSISSSINNQPRMLYCYKNVITGFAAKLTAEQAKAM---------- 98 (742)
Q Consensus 29 ~~~~yIV~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~i~~L---------- 98 (742)
..-+|||.|+++. . .+.+.+.+++. +.++.+.|. .|+||+++++++++++|
T Consensus 34 ~~~~~iV~~~~~~---~--------~~~~~~~~~~~-------g~~v~~~~~-~~~g~~~~l~~~~~~~l~~~~~~~~~~ 94 (539)
T 3afg_A 34 QEVSTIIMFDNQA---D--------KEKAVEILDFL-------GAKIKYNYH-IIPALAVKIKVKDLLIIAGLMDTGYFG 94 (539)
T ss_dssp CEEEEEEEESSHH---H--------HHHHHHHHHHH-------TCEEEEECS-SSSEEEEEEEHHHHHHHTTCSCCC---
T ss_pred CceEEEEEECCCC---C--------HHHHHHHHHhc-------CCeEEEEee-eeeEEEEEeCHHHHHHHHhhccccccc
Confidence 3457999999755 1 11122233322 457899997 69999999999999999
Q ss_pred -hcCCCeEEEEeceeeccccCCC--CCccCccCCCCCccCCCCCCccEEEEEcccCCCCCCCCCCCCCCCCCCccccccc
Q 048043 99 -ETKEGFISAHVEKTLQLHTTHT--PNFLGLHQNSGFWKDSNLGKGVIIGVMDTGITPGHPSFSDEGMPPPPAKWKGKCE 175 (742)
Q Consensus 99 -~~~p~V~~V~~~~~~~~~~~~s--~~~~g~~~~~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~ 175 (742)
+++|+|++|+++..+++..... ...+....+..+|..+++|+||+|||||||||++||+|.+
T Consensus 95 ~~~~~~V~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~gv~VaViDtGid~~Hpdl~~--------------- 159 (539)
T 3afg_A 95 NAQLSGVQFIQEDYVVKVAVETEGLDESAAQVMATNMWNLGYDGSGITIGIIDTGIDASHPDLQG--------------- 159 (539)
T ss_dssp CCCCTTEEEEEECCEEECC-----------CCBCSCCBCCSCCCTTCEEEEEESBCCTTSGGGTT---------------
T ss_pred cccCCCeeEEEecccccccCccccCCccccccCcHhHHhcCCCCCCcEEEEEecCCCCCChHHhC---------------
Confidence 8899999999999887743321 1112222356799999999999999999999999999974
Q ss_pred cCccccCccccceeecCCCCCCCCCCCCCCCchhhhhhhcccccCCCcccccCCcceeeecCcceEEEEEEeccCC-CCH
Q 048043 176 FKGAACNNKLIGARNFLQGSTGEPPLDDEGHGTHTATTAAGNFVNGANVFGQADGTAVGIAPLAHLAIYKVCDFDG-CSE 254 (742)
Q Consensus 176 ~g~~f~n~ki~~~~~~~~~~~~~~~~d~~gHGThVAGiiaG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g-~~~ 254 (742)
++++.++|.++. ..+.|+.||||||||||||+... ..|.+.||||+|+|+++|++++.| ++.
T Consensus 160 --------~i~~~~d~~~~~--~~~~D~~gHGThVAgiiag~~~~-------~~g~~~GvAp~A~l~~~kv~~~~g~~~~ 222 (539)
T 3afg_A 160 --------KVIGWVDFVNGK--TTPYDDNGHGTHVASIAAGTGAA-------SNGKYKGMAPGAKLVGIKVLNGQGSGSI 222 (539)
T ss_dssp --------TEEEEEETTTCC--SSCCBSSSHHHHHHHHHHCCCGG-------GTTTTCCSCTTCEEEEEECSCTTSEEEH
T ss_pred --------CEeeeEECCCCC--CCCCCCCCCHHHHHHHHhCcCcc-------CCCCEEEECCCCEEEEEEeecCCCCcCH
Confidence 355566776543 45778999999999999987421 133458999999999999999877 788
Q ss_pred HHHHHHHHHhhhC----CCcEEEEccCCCCCCCCCCHHHHHHHHhhcCCcEEEEecCCCCCCCC--CCCCCCCceEEecc
Q 048043 255 SRVYAAMDTAIDD----GVDVLSLSLGAASVPFFEDPLAIGSFSAIQKEIFVSCSAGNEGPNPS--TSSNEAPWILSVGA 328 (742)
Q Consensus 255 ~~i~~ai~~a~~~----g~~VIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~--~~~~~~p~vitVga 328 (742)
+++++||+||+++ |++|||||||........+.+..++.++.++|+++|+||||+|.... ..++..+++|+|||
T Consensus 223 ~~i~~ai~~a~~~~~~~g~~Vin~SlG~~~~~~~~~~l~~ai~~a~~~GvlvV~AAGN~g~~~~~~~~Pa~~~~vitVgA 302 (539)
T 3afg_A 223 SDIINGVDWAVQNKDKYGIKVINLSLGSSQSSDGTDSLSQAVNNAWDAGLVVVVAAGNSGPNKYTVGSPAAASKVITVGA 302 (539)
T ss_dssp HHHHHHHHHHHHTHHHHTEEEEEECCCCCSCCCSCSHHHHHHHHHHHTTCEEEEECCSCCSSSSCCCTTTTCSSSEEEEE
T ss_pred HHHHHHHHHHHhhhhhcCCcEEEeCCCCCCCCccchHHHHHHHHHHhcCCEEEEECCCCCCCCCcccCCccCCceEEEee
Confidence 9999999999986 89999999998765556688999999999999999999999998643 45678899999998
Q ss_pred cCCcceeEEEEEeCCCeeEeeeeccCCCCCCCCceeEEecCCCCCCCCCCcCCCCCCCCccceEEEeecCCcchhhhhHH
Q 048043 329 STTDRSIVASVELGNQAVYDGEALFQPKDFPSKQFPLIYPGANGNVSSAQCSPGSLSSNIRGKLVLCERGGGERTKKGQV 408 (742)
Q Consensus 329 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~g~iv~~~~g~~~~~~~~~~ 408 (742)
..
T Consensus 303 ~~------------------------------------------------------------------------------ 304 (539)
T 3afg_A 303 VD------------------------------------------------------------------------------ 304 (539)
T ss_dssp EC------------------------------------------------------------------------------
T ss_pred ec------------------------------------------------------------------------------
Confidence 42
Q ss_pred HhhcCCeEEEEeccCCCCccccCCCccccEEEEehhhHHHHHHHHhcCCCCeEEEEeceeEecccCCCccccccCCCCCC
Q 048043 409 VKDAGGIGMILMNDKLNGYSTLADPHLLPAVHVSYAAGESIKAYINSTSSPNATIVFKGTVIGKKSTPELASFSSRGPSI 488 (742)
Q Consensus 409 ~~~~g~~~~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~ 488 (742)
..+.+++||||||+.
T Consensus 305 -----------------------------------------------------------------~~~~~a~fSs~Gp~~ 319 (539)
T 3afg_A 305 -----------------------------------------------------------------KYDVITDFSSRGPTA 319 (539)
T ss_dssp -----------------------------------------------------------------TTSCBCSSSCCCCCT
T ss_pred -----------------------------------------------------------------CCcccccccCCCCCC
Confidence 113688999999998
Q ss_pred CCCCCcccceEecCCcEEeccCCCccCCCCCcccceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHcccccccC
Q 048043 489 ASPGILKPDIIGPGVNILAAWPFSVENKTNTKSTFNMVAGTSMSCPHLSGVAALLKSAHPDWSPAAIKSAIMTTADIVSL 568 (742)
Q Consensus 489 ~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~ 568 (742)
++++||||+|||++|+++++............|..++|||||||||||++|||+|++|+|++++||++|++||+++..
T Consensus 320 --~~~~kpdi~APG~~I~s~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~s~~~vk~~L~~tA~~~~~ 397 (539)
T 3afg_A 320 --DNRLKPEVVAPGNWIIAARASGTSMGQPINDYYTAAPGTAMATPHVAGIAALLLQAHPSWTPDKVKTALIETADIVKP 397 (539)
T ss_dssp --TCBCCCSEEEECSSEEEECCTTCCCSEECSSSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSBCSSG
T ss_pred --CCCCcccEecCcCCEEeeccCCCCCCCCCcccccccCchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCC
Confidence 689999999999999999865321111112369999999999999999999999999999999999999999998753
Q ss_pred CCCccccCCCCCCCCCcccccccCcCCcCCC
Q 048043 569 DGKPIVDQRLLPADMFAVGAGHVNPSSANDP 599 (742)
Q Consensus 569 ~g~~~~~~~~~~~~~~~~G~G~vd~~~Al~~ 599 (742)
.+ .++..||+|+||+.+|++.
T Consensus 398 ~~----------~~~~~~G~G~vn~~~Al~~ 418 (539)
T 3afg_A 398 DE----------IADIAYGAGRVNAYKAAYY 418 (539)
T ss_dssp GG----------CSBTTTBTCBCCHHHHHTG
T ss_pred CC----------CCccCccCCccCHHHHhhh
Confidence 21 2456899999999999985
No 5
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=100.00 E-value=6.8e-59 Score=511.16 Aligned_cols=339 Identities=27% Similarity=0.370 Sum_probs=275.9
Q ss_pred CceEEEEECCCCCCCCcchhccchHHHHHhhcccccccCCCCCCceEEEEcceeeEEEEEcCHHHHHHhhcCCCeEEEEe
Q 048043 30 LETYIVYVRKPDQDQATTSIKLDLDSWYHSFLPVSISSSINNQPRMLYCYKNVITGFAAKLTAEQAKAMETKEGFISAHV 109 (742)
Q Consensus 30 ~~~yIV~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~i~~L~~~p~V~~V~~ 109 (742)
+.+|||+|+++. . ..+ +++ ..+.++.+.|. .+++|+++++++++++|+++|+|++|++
T Consensus 2 ~~~~iV~~~~~~---~-------~~~----~~~-------~~g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~p~V~~v~~ 59 (395)
T 2z2z_A 2 TIRVIVSVDKAK---F-------NPH----EVL-------GIGGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEF 59 (395)
T ss_dssp EEEEEEEECTTT---C-------CHH----HHH-------HTTCEEEEECS-SSSEEEEEEEGGGHHHHHTSTTEEEEEE
T ss_pred cEEEEEEECCCc---c-------HHH----HHH-------HcCCEEEEEec-cCCEEEEEECHHHHHHHHcCCCceEEEE
Confidence 578999999876 1 111 222 23568999998 4999999999999999999999999999
Q ss_pred ceeeccccCCC-----------CCccCccC--CCCCccCCCCCCc--cEEEEEcccCCCCCCCCCCCCCCCCCCcccccc
Q 048043 110 EKTLQLHTTHT-----------PNFLGLHQ--NSGFWKDSNLGKG--VIIGVMDTGITPGHPSFSDEGMPPPPAKWKGKC 174 (742)
Q Consensus 110 ~~~~~~~~~~s-----------~~~~g~~~--~~~~~~~~~~G~g--V~VaVIDtGid~~Hp~f~~~g~~~~~~~~~g~~ 174 (742)
++.+++..... ...|++.. .+.+|..+ +|+| |+|||||||||++||+|.++
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~~~~~w~~~-~G~g~~v~VaViDtGid~~Hp~l~~~------------- 125 (395)
T 2z2z_A 60 DHQAVLLGKPSWLGGGSTQPAQTIPWGIERVKAPSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAAN------------- 125 (395)
T ss_dssp CCEEEECCEECC------CCSCCCCHHHHHTTCGGGGGTC-SSCCTTCEEEEEESCBCTTCTTTGGG-------------
T ss_pred eeeecccCCCCcccccccCccccCCcchhhcCHHHHHhhc-CCCCCcEEEEEEcCCCCCCChhHhhc-------------
Confidence 99887643211 12354433 45689998 9999 99999999999999999753
Q ss_pred ccCccccCccccceeecCCCCC---CCCCCCCCCCchhhhhhhcccccCCCcccccCCcceeeecCcceEEEEEEeccCC
Q 048043 175 EFKGAACNNKLIGARNFLQGST---GEPPLDDEGHGTHTATTAAGNFVNGANVFGQADGTAVGIAPLAHLAIYKVCDFDG 251 (742)
Q Consensus 175 ~~g~~f~n~ki~~~~~~~~~~~---~~~~~d~~gHGThVAGiiaG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g 251 (742)
+...++|..+.. ..+..|+.||||||||||+|.. + .. .+.||||+|+|+.+|++++.|
T Consensus 126 ----------~~~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiia~~~-n-------~~-g~~GvAp~a~l~~~kv~~~~g 186 (395)
T 2z2z_A 126 ----------IAWCVSTLRGKVSTKLRDCADQNGHGTHVIGTIAALN-N-------DI-GVVGVAPGVQIYSVRVLDARG 186 (395)
T ss_dssp ----------EEEEEECGGGCCBCCHHHHBCSSSHHHHHHHHHHCCC-S-------SS-SCCCSSTTCEEEEEECSCTTS
T ss_pred ----------cccCccccCCcccCCCCCCCCCCCCHHHHHHHHHeec-C-------CC-ceEEECCCCEEEEEEEecCCC
Confidence 222233332210 0124688999999999999872 1 11 247999999999999998877
Q ss_pred -CCHHHHHHHHHHhhhC--------------------CCcEEEEccCCCCCCCCCCHHHHHHHHhhcCCcEEEEecCCCC
Q 048043 252 -CSESRVYAAMDTAIDD--------------------GVDVLSLSLGAASVPFFEDPLAIGSFSAIQKEIFVSCSAGNEG 310 (742)
Q Consensus 252 -~~~~~i~~ai~~a~~~--------------------g~~VIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g 310 (742)
++.+++++||+||+++ +++|||||||+.. ....+..++.++.++|+++|+||||+|
T Consensus 187 ~~~~~~i~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~---~~~~~~~ai~~a~~~gv~vV~AAGN~g 263 (395)
T 2z2z_A 187 SGSYSDIAIGIEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPA---DDSYLYDMIIQAYNAGIVIVAASGNEG 263 (395)
T ss_dssp EEEHHHHHHHHHHHHHTTTTCSSTTCSSCCTTCTTSCCCSEEEECEEBSC---CCHHHHHHHHHHHHTTCEEEEECCSSC
T ss_pred CccHHHHHHHHHHHHhCccccccccccccccccccCCCCeEEEecCCCCC---CCHHHHHHHHHHHHCCCEEEEECCCCC
Confidence 7888999999999988 9999999999863 235677788889999999999999999
Q ss_pred CCCCCCCCCCCceEEecccCCcceeEEEEEeCCCeeEeeeeccCCCCCCCCceeEEecCCCCCCCCCCcCCCCCCCCccc
Q 048043 311 PNPSTSSNEAPWILSVGASTTDRSIVASVELGNQAVYDGEALFQPKDFPSKQFPLIYPGANGNVSSAQCSPGSLSSNIRG 390 (742)
Q Consensus 311 ~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~g 390 (742)
.....+++..+++|+|||..
T Consensus 264 ~~~~~~Pa~~~~vi~Vga~~------------------------------------------------------------ 283 (395)
T 2z2z_A 264 APSPSYPAAYPEVIAVGAID------------------------------------------------------------ 283 (395)
T ss_dssp CSSCCBTTTSTTEEEEEEEC------------------------------------------------------------
T ss_pred CCCCCCccCCCCEEEEEEec------------------------------------------------------------
Confidence 88788889999999999842
Q ss_pred eEEEeecCCcchhhhhHHHhhcCCeEEEEeccCCCCccccCCCccccEEEEehhhHHHHHHHHhcCCCCeEEEEeceeEe
Q 048043 391 KLVLCERGGGERTKKGQVVKDAGGIGMILMNDKLNGYSTLADPHLLPAVHVSYAAGESIKAYINSTSSPNATIVFKGTVI 470 (742)
Q Consensus 391 ~iv~~~~g~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~ 470 (742)
T Consensus 284 -------------------------------------------------------------------------------- 283 (395)
T 2z2z_A 284 -------------------------------------------------------------------------------- 283 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCccccccCCCCCCCCCCCcccceEecCCcEEeccCCCccCCCCCcccceeeccccchhHHHHHHHHHHHhhCC--
Q 048043 471 GKKSTPELASFSSRGPSIASPGILKPDIIGPGVNILAAWPFSVENKTNTKSTFNMVAGTSMSCPHLSGVAALLKSAHP-- 548 (742)
Q Consensus 471 ~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p-- 548 (742)
..+.+++||+||| +|+|||++|+++++. +.|..++|||||||||||++|||+|++|
T Consensus 284 ---~~~~~a~fS~~G~----------~v~APG~~i~s~~~~---------~~y~~~sGTS~AaP~VaG~aAll~~~~p~~ 341 (395)
T 2z2z_A 284 ---SNDNIASFSNRQP----------EVSAPGVDILSTYPD---------DSYETLMGTAMATPHVSGVVALIQAAYYQK 341 (395)
T ss_dssp ---TTSCBCTTSCSSC----------SEEEECSSEEEEETT---------TEEEEEESHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCCCCCcccCCCC----------CEEeCCCCeeeecCC---------CceEecCCHHHHHHHHHHHHHHHHHhCccc
Confidence 1236889999997 679999999999987 7899999999999999999999999999
Q ss_pred -----------CCCHHHHHHHHHcccccccCCCCccccCCCCCCCCCcccccccCcCCcCCC
Q 048043 549 -----------DWSPAAIKSAIMTTADIVSLDGKPIVDQRLLPADMFAVGAGHVNPSSANDP 599 (742)
Q Consensus 549 -----------~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vd~~~Al~~ 599 (742)
.|++.+||++|++||+++... ..+..||||+||+.+|++.
T Consensus 342 ~~~~~~~~~~~~ls~~~v~~~L~~tA~~~~~~-----------g~~~~~G~G~vd~~~A~~~ 392 (395)
T 2z2z_A 342 YGKILPVGTFDDISKNTVRGILHITADDLGPT-----------GWDADYGYGVVRAALAVQA 392 (395)
T ss_dssp HSSCCCCCCTTCCSSSSHHHHHHHHSBCCSSS-----------SSBTTTBTCBCCHHHHHHH
T ss_pred cccccccccccCCCHHHHHHHHHhhccccCCC-----------CCCCCccCceeCHHHHHHH
Confidence 999999999999999987432 2457899999999999864
No 6
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=100.00 E-value=2.4e-58 Score=524.72 Aligned_cols=335 Identities=18% Similarity=0.222 Sum_probs=59.5
Q ss_pred CceEEEEECCCCCCCCcchhccchHHHHHhhcccccccCCCCCCceEEEEcceeeEEEEEcCHHHHHHhhcCCCeEEEEe
Q 048043 30 LETYIVYVRKPDQDQATTSIKLDLDSWYHSFLPVSISSSINNQPRMLYCYKNVITGFAAKLTAEQAKAMETKEGFISAHV 109 (742)
Q Consensus 30 ~~~yIV~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~i~~L~~~p~V~~V~~ 109 (742)
+++|||+||++. .... ...+.+++...+++. ....++++.|.+.|+||+++++++++++|+++|+|++|++
T Consensus 75 pg~YIV~lk~~~---~~~~-~~~~~~~l~a~~~~~-----g~~~~v~~~y~~~~~Gfsv~l~~~~l~~L~~~P~V~~Vep 145 (692)
T 2p4e_P 75 PGTYVVVLKEET---HLSQ-SERTARRLQAQAARR-----GYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEE 145 (692)
T ss_dssp EEEEEEEECTTC---CHHH-HHHHHHHHHHHHHHT-----TCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEE
T ss_pred CCcEEEEECCCC---CHHH-HHHHHHHHHHHHhhc-----ccccceeeEeeccccEEEEEeCHHHHHHHHcCCCceEEEe
Confidence 469999999987 4333 233444444333221 3456899999999999999999999999999999999999
Q ss_pred ceeeccccCCCCCccCccCC------CCCccCCCCCCccEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCccccCc
Q 048043 110 EKTLQLHTTHTPNFLGLHQN------SGFWKDSNLGKGVIIGVMDTGITPGHPSFSDEGMPPPPAKWKGKCEFKGAACNN 183 (742)
Q Consensus 110 ~~~~~~~~~~s~~~~g~~~~------~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~n~ 183 (742)
+..++.. ...|++.++ ...|..+.+|+||+|||||||||++||+|.++.. |.+... +..
T Consensus 146 d~~v~~~----~~pWgL~~i~~~~~~~~~w~~~~~G~GV~VaVIDTGId~~HpdL~gr~~------~~~~~~----~~d- 210 (692)
T 2p4e_P 146 DSSVFAQ----SIPWNLERITPPRYRADEYQPPDGGSLVEVYLLDTSIQSDHREIEGRVM------VTDFEN----VPE- 210 (692)
T ss_dssp EEEEEEC-------------------------------------------------------------------------
T ss_pred ccccccC----CCCcchhhcccccccccccccCCCCCCcEEEEEcCCCCCCChhhcCceE------eccccc----ccC-
Confidence 9987652 122555442 2368888999999999999999999999986421 100000 000
Q ss_pred cccceeecCCCCCCCCCCCCCCCchhhhhhhcccccCCCcccccCCcceeeecCcceEEEEEEeccCC-CCHHHHHHHHH
Q 048043 184 KLIGARNFLQGSTGEPPLDDEGHGTHTATTAAGNFVNGANVFGQADGTAVGIAPLAHLAIYKVCDFDG-CSESRVYAAMD 262 (742)
Q Consensus 184 ki~~~~~~~~~~~~~~~~d~~gHGThVAGiiaG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~ 262 (742)
.....| ...+.|.+||||||||||+|+. .||||+|+|+++||+++.| ++.+++++||+
T Consensus 211 --~dg~~~-----~~~~~D~~GHGTHVAGiIAg~~--------------~GVAP~A~L~~vKVl~~~G~g~~s~ii~aI~ 269 (692)
T 2p4e_P 211 --EDGTRF-----HRQASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQGKGTVSGTLIGLE 269 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --CCCCcc-----cCCCCCCCCcHHHhhhHhhcCC--------------CccCCCCEEEEEEeecCCCCCCHHHHHHHHH
Confidence 000001 1345789999999999999873 6999999999999999877 78889999999
Q ss_pred HhhhC------CCcEEEEccCCCCCCCCCCHHHHHHHHhhcCCcEEEEecCCCCCCCCC-CCCCCCceEEecccCCccee
Q 048043 263 TAIDD------GVDVLSLSLGAASVPFFEDPLAIGSFSAIQKEIFVSCSAGNEGPNPST-SSNEAPWILSVGASTTDRSI 335 (742)
Q Consensus 263 ~a~~~------g~~VIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~-~~~~~p~vitVga~~~~~~~ 335 (742)
|++++ +++|||||||+... ..+..++.++.++|++||+||||+|.+... +++..|++|+|||++.+...
T Consensus 270 ~a~~~~~~~~~g~~VINmSlGg~~s----~~l~~Ai~~A~~~GVlvVaAAGN~G~~~~~~sPA~~~~vItVGA~d~~~~~ 345 (692)
T 2p4e_P 270 FIRKSQLVQPVGPLVVLLPLAGGYS----RVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQP 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHhhhhcccCCceEEEecCCCCCc----HHHHHHHHHHHHCCCEEEEECCCCCCCCCccCcccCCCEEEEEEEcCCCCc
Confidence 99986 89999999997643 445556668889999999999999987643 47888999999995322100
Q ss_pred EEEEEeCCCeeEeeeeccCCCCCCCCceeEEecCCCCCCCCCCcCCCCCCCCccceEEEeecCCcchhhhhHHHhhcCCe
Q 048043 336 VASVELGNQAVYDGEALFQPKDFPSKQFPLIYPGANGNVSSAQCSPGSLSSNIRGKLVLCERGGGERTKKGQVVKDAGGI 415 (742)
Q Consensus 336 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~g~~ 415 (742)
T Consensus 346 -------------------------------------------------------------------------------- 345 (692)
T 2p4e_P 346 -------------------------------------------------------------------------------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEeccCCCCccccCCCccccEEEEehhhHHHHHHHHhcCCCCeEEEEeceeEecccCCCccccccCCCCCCCCCCCcc
Q 048043 416 GMILMNDKLNGYSTLADPHLLPAVHVSYAAGESIKAYINSTSSPNATIVFKGTVIGKKSTPELASFSSRGPSIASPGILK 495 (742)
Q Consensus 416 ~~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~K 495 (742)
...-+.||+|||.
T Consensus 346 -----------------------------------------------------------a~~ss~fSn~G~~-------- 358 (692)
T 2p4e_P 346 -----------------------------------------------------------VTLGTLGTNFGRC-------- 358 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----------------------------------------------------------cccccccCCCCCc--------
Confidence 0001238999974
Q ss_pred cceEecCCcEEeccCCCccCCCCCcccceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHccccccc
Q 048043 496 PDIIGPGVNILAAWPFSVENKTNTKSTFNMVAGTSMSCPHLSGVAALLKSAHPDWSPAAIKSAIMTTADIVS 567 (742)
Q Consensus 496 PDI~APG~~I~sa~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~ 567 (742)
|||+|||++|+++++... ..|..++|||||||||||++|||+|++|+|+|++||++|++||.+..
T Consensus 359 vDI~APG~~I~St~~~~~-------~~y~~~SGTSmAAPhVAG~aALlls~~P~ltp~qVk~~L~~tA~~~~ 423 (692)
T 2p4e_P 359 VDLFAPGEDIIGASSDCS-------TCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKDV 423 (692)
T ss_dssp ------------------------------------------------------------------------
T ss_pred eeEEecCCcEEeeccCCC-------CceEeccchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhccccc
Confidence 599999999999988632 57899999999999999999999999999999999999999998653
No 7
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=100.00 E-value=4.2e-56 Score=501.49 Aligned_cols=334 Identities=20% Similarity=0.267 Sum_probs=263.3
Q ss_pred CCceEEEEcceeeEEEEEcCHHHHHHhhc-CCCeEEEEeceeeccccCCC----------CCccCccC---CCCCccCCC
Q 048043 72 QPRMLYCYKNVITGFAAKLTAEQAKAMET-KEGFISAHVEKTLQLHTTHT----------PNFLGLHQ---NSGFWKDSN 137 (742)
Q Consensus 72 ~~~~~~~y~~~~~g~s~~~~~~~i~~L~~-~p~V~~V~~~~~~~~~~~~s----------~~~~g~~~---~~~~~~~~~ 137 (742)
+.++.+.|.. |++|+++++++++++|++ +|+|++|+++..+++..... ...|++.. ...+|..++
T Consensus 65 g~~v~~~~~~-~~~~~~~~~~~~~~~L~~~~p~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~w~l~~i~~~~~~~~~~~ 143 (471)
T 3t41_A 65 SLNVVYNIPE-LHVAQIKMTKMHANALANYKNDIKYINATCSTCITSEKTIDRTSNESLFSRQWDMNKITNNGASYDDLP 143 (471)
T ss_dssp TCEEEEEEGG-GTEEEEEECHHHHHHHHTCTTTEEEEEECCSSCBCCCCCCCC---CCSCCCCHHHHTTTTTTGGGGGCC
T ss_pred CCEEEEecCC-ccEEEEEeCHHHHHHHHhcCCCCcEEEecceeccccccccccCCCCccccccccHhhccCcHHHHhccC
Confidence 5678888864 999999999999999999 99999999998877654322 12344443 236899999
Q ss_pred CCCccEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCccccCccccceeecCCCCCCCCCCCCCCCchhhhhhhccc
Q 048043 138 LGKGVIIGVMDTGITPGHPSFSDEGMPPPPAKWKGKCEFKGAACNNKLIGARNFLQGSTGEPPLDDEGHGTHTATTAAGN 217 (742)
Q Consensus 138 ~G~gV~VaVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~n~ki~~~~~~~~~~~~~~~~d~~gHGThVAGiiaG~ 217 (742)
+|+||+|||||||||++||+|.++... +....- ......+... ....+...+.|..||||||||||+|+
T Consensus 144 ~G~gv~VaViDtGid~~Hp~~~~~~~~-------~~~~~~---~~~~~~~~~~-~~~~~~~~~~d~~gHGT~vAgiiaa~ 212 (471)
T 3t41_A 144 KHANTKIAIIDTGVMKNHDDLKNNFST-------DSKNLV---PLNGFRGTEP-EETGDVHDVNDRKGHGTMVSGQTSAN 212 (471)
T ss_dssp SSCCCCEEEEESCCCTTCTTTTTTBCT-------TCEECC---CTTCGGGCCT-TCCCCTTCCCCSSSHHHHHHHHHHCB
T ss_pred CCCCcEEEEEeCCCCCCChhHhcCccc-------CCcccc---cCCCccCCCc-ccCCCCCCCcCCCCccchhhheeecC
Confidence 999999999999999999999864211 100000 0000000000 00011235678999999999999976
Q ss_pred ccCCCcccccCCcceeeecCcceEEEEEEeccCCCCHHHHHHHHHHhhhCCCcEEEEccCCCCC-C------------CC
Q 048043 218 FVNGANVFGQADGTAVGIAPLAHLAIYKVCDFDGCSESRVYAAMDTAIDDGVDVLSLSLGAASV-P------------FF 284 (742)
Q Consensus 218 ~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~~g~~VIn~SlG~~~~-~------------~~ 284 (742)
. .+.||||+|+|+.+|++++.++..+++++||+||++++++|||||||.... . ..
T Consensus 213 g------------~~~GvAp~a~l~~~kv~~~~~~~~~~i~~ai~~a~~~g~~Vin~S~G~~~~~~~~~~~~~~~~~~~~ 280 (471)
T 3t41_A 213 G------------KLIGVAPNNKFTMYRVFGSKKTELLWVSKAIVQAANDGNQVINISVGSYIILDKNDHQTFRKDEKVE 280 (471)
T ss_dssp S------------SSBCSSTTSCEEEEECCSSSCCCHHHHHHHHHHHHHTTCSEEEECCCEEEEECTTCCCSEESSCHHH
T ss_pred C------------ceeEECCCCeEEEEEeccCCCCcHHHHHHHHHHHHhCCCCEEEeCCCCCCCCccccccccccccchh
Confidence 2 147999999999999998866889999999999999999999999997321 0 12
Q ss_pred CCHHHHHHHHhhcCCcEEEEecCCCCCCCCC------------------CCCCCCceEEecccCCcceeEEEEEeCCCee
Q 048043 285 EDPLAIGSFSAIQKEIFVSCSAGNEGPNPST------------------SSNEAPWILSVGASTTDRSIVASVELGNQAV 346 (742)
Q Consensus 285 ~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~------------------~~~~~p~vitVga~~~~~~~~~~~~~~~g~~ 346 (742)
.+.+..++..+.++|++||+||||+|..... .++..+++|+|||++
T Consensus 281 ~~~~~~ai~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~~~~~~~~~~~~~Pa~~~~vitVgA~~---------------- 344 (471)
T 3t41_A 281 YDALQKAINYAKKKKSIVVAAAGNDGIDVNDKQKLKLQREYQGNGEVKDVPASMDNVVTVGSTD---------------- 344 (471)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCSSCCBTTCHHHHHHTTTCCSSSEEEEETTTSTTEEEEEEEC----------------
T ss_pred HHHHHHHHHHHHhCCCEEEEEcCCCCcCCCcccccccccccccCCceeeccccCCCeEEEEeeC----------------
Confidence 2457778888889999999999999987542 567788999999842
Q ss_pred EeeeeccCCCCCCCCceeEEecCCCCCCCCCCcCCCCCCCCccceEEEeecCCcchhhhhHHHhhcCCeEEEEeccCCCC
Q 048043 347 YDGEALFQPKDFPSKQFPLIYPGANGNVSSAQCSPGSLSSNIRGKLVLCERGGGERTKKGQVVKDAGGIGMILMNDKLNG 426 (742)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~g~~~~i~~~~~~~~ 426 (742)
T Consensus 345 -------------------------------------------------------------------------------- 344 (471)
T 3t41_A 345 -------------------------------------------------------------------------------- 344 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCCccccEEEEehhhHHHHHHHHhcCCCCeEEEEeceeEecccCCCccccccCCCCCCCCCCCcccceEecCCc--
Q 048043 427 YSTLADPHLLPAVHVSYAAGESIKAYINSTSSPNATIVFKGTVIGKKSTPELASFSSRGPSIASPGILKPDIIGPGVN-- 504 (742)
Q Consensus 427 ~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~-- 504 (742)
..+.+++||++||+. |||+|||++
T Consensus 345 -----------------------------------------------~~~~~a~fS~~G~~~-------~di~APG~~i~ 370 (471)
T 3t41_A 345 -----------------------------------------------QKSNLSEFSNFGMNY-------TDIAAPGGSFA 370 (471)
T ss_dssp -----------------------------------------------TTSSBCTTCCBCTTT-------CCEEEECCCCH
T ss_pred -----------------------------------------------CCCCCCCccCCCCCC-------CeEEecCCCcc
Confidence 123688999999974 599999987
Q ss_pred --------------------EEeccCCCccCCCCCcccceeeccccchhHHHHHHHHHHHhhCC-CCCHHHHHHHHHccc
Q 048043 505 --------------------ILAAWPFSVENKTNTKSTFNMVAGTSMSCPHLSGVAALLKSAHP-DWSPAAIKSAIMTTA 563 (742)
Q Consensus 505 --------------------I~sa~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p-~~s~~~ik~~L~~TA 563 (742)
|+++++. +.|..++|||||||||||++|||+|++| .++|++||++|++||
T Consensus 371 ~~~~~g~~~~~~~~~~~~~~i~s~~~~---------~~~~~~sGTS~AaP~VAG~aAll~~~~p~~~~~~~v~~~L~~tA 441 (471)
T 3t41_A 371 YLNQFGVDKWMNEGYMHKENILTTANN---------GRYIYQAGTALATPKVSGALALIIDKYHLEKHPDKAIELLYQHG 441 (471)
T ss_dssp HHHHHHHHHHHHTTTHHHHSEEEECTT---------SSEEEECSHHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHS
T ss_pred cccccccccccccccccCceeEecCCC---------CCEEeecchHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhC
Confidence 8999887 7899999999999999999999999999 899999999999999
Q ss_pred ccccCCCCccccCCCCCCCCCcccccccCcCCcCCCC
Q 048043 564 DIVSLDGKPIVDQRLLPADMFAVGAGHVNPSSANDPG 600 (742)
Q Consensus 564 ~~~~~~g~~~~~~~~~~~~~~~~G~G~vd~~~Al~~~ 600 (742)
++... .++..||||+||+.+|++..
T Consensus 442 ~~~~~------------~~~~~~G~G~vd~~~Al~~a 466 (471)
T 3t41_A 442 TSKNN------------KPFSRYGHGELDVYKALNVA 466 (471)
T ss_dssp BCCSC------------CCHHHHTTCBBCHHHHTTTT
T ss_pred CCCCC------------CCcCccccChhCHHHHHHHH
Confidence 97632 35678999999999999853
No 8
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=100.00 E-value=4.6e-55 Score=487.56 Aligned_cols=382 Identities=26% Similarity=0.369 Sum_probs=275.4
Q ss_pred cCccC--CCCCccCCCCCCccEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCccccCccccceeecCCCCCCCCCC
Q 048043 124 LGLHQ--NSGFWKDSNLGKGVIIGVMDTGITPGHPSFSDEGMPPPPAKWKGKCEFKGAACNNKLIGARNFLQGSTGEPPL 201 (742)
Q Consensus 124 ~g~~~--~~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~n~ki~~~~~~~~~~~~~~~~ 201 (742)
|+++. +..+|..+ |+||+|||||||||++||+|.++ .| ..+++....+...+.
T Consensus 6 W~l~~i~~~~~w~~~--g~gv~VaViDtGvd~~Hp~l~~~-------~~----------------~~~~~~~~~~~~~~~ 60 (441)
T 1y9z_A 6 WGQTFVGATVLSDSQ--AGNRTICIIDSGYDRSHNDLNAN-------NV----------------TGTNNSGTGNWYQPG 60 (441)
T ss_dssp HHHHHTTCSSSCCTT--GGGCEEEEEESCCCTTSTTTTTS-------EE----------------EECCCTTSCCTTCCC
T ss_pred CChhhcChhhhhhcC--CCCcEEEEEcCCCCCCChhHhcC-------cc----------------cCcccCCCCCCCCCC
Confidence 44443 46688865 77999999999999999999853 11 112222211123567
Q ss_pred CCCCCchhhhhhhcccccCCCcccccCCcceeeecCcc--eEEEEEEeccCC-CCHHHHHHHHHHhhhC-CCcEEEEccC
Q 048043 202 DDEGHGTHTATTAAGNFVNGANVFGQADGTAVGIAPLA--HLAIYKVCDFDG-CSESRVYAAMDTAIDD-GVDVLSLSLG 277 (742)
Q Consensus 202 d~~gHGThVAGiiaG~~~~~~~~~g~~~g~~~GvAP~A--~l~~~kv~~~~g-~~~~~i~~ai~~a~~~-g~~VIn~SlG 277 (742)
|..||||||||||+|... ..+ +.||||+| +|+.+|+++..| ++.+++++||+||+++ |++|||||||
T Consensus 61 d~~gHGT~vAgiia~~~~--------~~g-~~GvAP~a~~~l~~~kv~~~~g~~~~~~~~~ai~~a~~~~g~~Vin~S~G 131 (441)
T 1y9z_A 61 NNNAHGTHVAGTIAAIAN--------NEG-VVGVMPNQNANIHIVKVFNEAGWGYSSSLVAAIDTCVNSGGANVVTMSLG 131 (441)
T ss_dssp SSCCHHHHHHHHHHCCCS--------SSB-CCCSSCSSCSEEEEEECEETTEECCSSCHHHHHHHHHHTTCCSEEEECCC
T ss_pred CCCCcHHHHHHHHhcccC--------CCC-ceEecCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHHhcCCcEEEeCCC
Confidence 889999999999998741 122 47999995 999999998877 7888999999999999 9999999999
Q ss_pred CCCCCCCCCHHHHHHHHhhcCCcEEEEecCCCCCCCCCCCCCCCceEEecccCCcceeE-------------------EE
Q 048043 278 AASVPFFEDPLAIGSFSAIQKEIFVSCSAGNEGPNPSTSSNEAPWILSVGASTTDRSIV-------------------AS 338 (742)
Q Consensus 278 ~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVga~~~~~~~~-------------------~~ 338 (742)
.... ...+..++.++.++|++||+||||+|.....+++..+++|+|||.+.+.... ..
T Consensus 132 ~~~~---~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~VgA~~~~~~~~~~S~~g~~vdv~ApG~~i~s~ 208 (441)
T 1y9z_A 132 GSGS---TTTERNALNTHYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAVDSNLDHAAFSQYTDQVEISGPGEAILST 208 (441)
T ss_dssp BSCC---BHHHHHHHHHHHHTTCEEEEECCSSSSSBCCBTTTSTTEEEEEEECTTCCBCTTSCCCTTEEEEEECSSEEEE
T ss_pred CCCC---CHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCCCCCCCeEEEEEECCCCCCCccccCCCceEEEeccCCeecc
Confidence 8742 2456777888999999999999999998888899999999999987654321 11
Q ss_pred EEeCCCe----eEeeeeccCCCCCCCC-cee--EEecCC--CC--CCCCCCcCCC--CCC-CCccceEEEeecCCc----
Q 048043 339 VELGNQA----VYDGEALFQPKDFPSK-QFP--LIYPGA--NG--NVSSAQCSPG--SLS-SNIRGKLVLCERGGG---- 400 (742)
Q Consensus 339 ~~~~~g~----~~~~~~~~~~~~~~~~-~~~--~~~~~~--~~--~~~~~~c~~~--~~~-~~~~g~iv~~~~g~~---- 400 (742)
...+++. .+.+.+++.....+.. .++ ..|... .+ ......|... .++ .+++|||++|+|+.|
T Consensus 209 ~~~g~g~~~~~~~~G~s~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~C~~~~~~~~~~~~~gkivl~~rg~~~~~~ 288 (441)
T 1y9z_A 209 VTVGEGRLADITIGGQSYFSNGVVPHNRLTPSGTSYAPAPINASATGALAECTVNGTSFSCGNMANKICLVERVGNQGSS 288 (441)
T ss_dssp CSTTCEEEEEEEETTEECGGGCCEECEEEEEETTEEEECCCCCEEEEEEEEEEEETTEEECCCCTTEEEEEECCSCSSSS
T ss_pred ccCCCcccceeecccccccccccCcccccccCCccccccccccccccchhccccccccccCCCccccEEEEeccccCccc
Confidence 1111221 2222332211100000 000 011100 00 0122347644 334 789999999999876
Q ss_pred -chhhhhHHHhhcCCeEEEEeccCCCCc------cccCCCccccEEEEehhhHHHHHHHHhcCCCCeEEEEeceeEeccc
Q 048043 401 -ERTKKGQVVKDAGGIGMILMNDKLNGY------STLADPHLLPAVHVSYAAGESIKAYINSTSSPNATIVFKGTVIGKK 473 (742)
Q Consensus 401 -~~~~~~~~~~~~g~~~~i~~~~~~~~~------~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~ 473 (742)
.+.+|..+++++|+.++|++++..... ........+|.+.++..+|..|+.++.+. .+
T Consensus 289 ~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~----~t----------- 353 (441)
T 1y9z_A 289 YPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDRATGLALKAKLGQS----TT----------- 353 (441)
T ss_dssp CTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEECTTCCCCSCEEEECHHHHHHHHTTTTSE----EE-----------
T ss_pred ccHHHHHHHHHhcCCeEEEEEeCCCccccccccccccccCccccEEEEeHHHHHHHHHHhcCC----cc-----------
Confidence 678899999999999999998754311 11223567999999999999998876321 11
Q ss_pred CCCccccccCCCCCCCCCCCcccceEecCCcEEeccCCCccCCCCCcccceeeccccchhHHHHHHHHHHHhhCCCCCHH
Q 048043 474 STPELASFSSRGPSIASPGILKPDIIGPGVNILAAWPFSVENKTNTKSTFNMVAGTSMSCPHLSGVAALLKSAHPDWSPA 553 (742)
Q Consensus 474 ~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~ 553 (742)
+ ++... +.|..++|||||||||||++|||+|+||+|+|+
T Consensus 354 ------------------------~--------~~~~~---------~~y~~~sGTSmAaP~VAG~aALl~~~~p~~sp~ 392 (441)
T 1y9z_A 354 ------------------------V--------SNQGN---------QDYEYYNGTSMATPHVSGVATLVWSYHPECSAS 392 (441)
T ss_dssp ------------------------E--------EEEEE---------ESEEEECSHHHHHHHHHHHHHHHHHHCTTSCHH
T ss_pred ------------------------c--------ccccC---------CCceeecccccCCcccchHHHHHHHHCCCCCHH
Confidence 1 11112 689999999999999999999999999999999
Q ss_pred HHHHHHHcccccccCCCCccccCCCCCCCCCcccccccCcCCcCCCCccccCCCCCcccccccCCCC
Q 048043 554 AIKSAIMTTADIVSLDGKPIVDQRLLPADMFAVGAGHVNPSSANDPGLIYDIQPDDYIPYLCGLNYS 620 (742)
Q Consensus 554 ~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vd~~~Al~~~lv~~~~~~d~~~~~~~~~~~ 620 (742)
+||++||+||++++..+ .+..||+|+||+.+|++ |+.|+|+++++
T Consensus 393 ~ik~~L~~TA~~~~~~g-----------~~~~~G~G~vn~~~A~~-----------~~~~lc~~~~~ 437 (441)
T 1y9z_A 393 QVRAALNATADDLSVAG-----------RDNQTGYGMINAVAAKA-----------YLDESCTGPTD 437 (441)
T ss_dssp HHHHHHHHHSBCCSSSS-----------CBTTTBTCBCCHHHHHH-----------HHHHCTTCC--
T ss_pred HHHHHHHhhchhhccCC-----------CcccccccccCHHHHHH-----------HHHhhhcCCCC
Confidence 99999999999886543 35679999999999964 89999998753
No 9
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=100.00 E-value=5e-55 Score=500.97 Aligned_cols=370 Identities=22% Similarity=0.294 Sum_probs=273.2
Q ss_pred CCCCceEEEEECCCCCCCCcchhccchHHHHHhhcccccccCCCCCCceEEEEcceeeEEEEEcCH----HHHHHhh--c
Q 048043 27 TDSLETYIVYVRKPDQDQATTSIKLDLDSWYHSFLPVSISSSINNQPRMLYCYKNVITGFAAKLTA----EQAKAME--T 100 (742)
Q Consensus 27 ~~~~~~yIV~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~----~~i~~L~--~ 100 (742)
...+++|||.|++.. . ..+ +++.. +.++.+++. .+++++++++. +.+++|+ +
T Consensus 28 ~~~~~~~IV~~k~~~---~-------~~~----~~~~~-------g~~v~~~~~-~i~~~~~~~~~~~~~~~~~~l~~~~ 85 (671)
T 1r6v_A 28 EYTEGKILVGYNDRS---E-------VDK----IVKAV-------NGKVVLELP-QIKVVSIKLNGMTVKQAYDKIKALA 85 (671)
T ss_dssp SBCTTEEEEEESSHH---H-------HHH----HHHHH-------TCEEEEEEG-GGTEEEEECSSCCHHHHHHHHTTSC
T ss_pred ccCCccEEEEECCCc---C-------HHH----HHHhc-------CCeEEEEcC-CCcEEEEEeCCcCHHHHHHHHHhcc
Confidence 346899999999754 1 111 22221 346777877 58899999864 3456676 4
Q ss_pred CCCeEEEEeceeecccc----C---C--------------------CCCccCccC--CCCC-ccCCCCCCccEEEEEccc
Q 048043 101 KEGFISAHVEKTLQLHT----T---H--------------------TPNFLGLHQ--NSGF-WKDSNLGKGVIIGVMDTG 150 (742)
Q Consensus 101 ~p~V~~V~~~~~~~~~~----~---~--------------------s~~~~g~~~--~~~~-~~~~~~G~gV~VaVIDtG 150 (742)
+|+|++|||+..+++.. . . ....|++.. +..+ |+. ++|+||+|||||||
T Consensus 86 ~~~V~~vepd~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~l~~I~~~~a~w~~-~tG~gV~VAVIDTG 164 (671)
T 1r6v_A 86 LKGIRYVEPSYKRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEELSNELWGLEAIGVTQQLWEE-ASGTNIIVAVVDTG 164 (671)
T ss_dssp CSSEEEEECCBCCEECCCEECCCCTTTTCSSSSCCSSSTTCCSSTTGGGCHHHHHTTCCHHHHHH-CSCTTCEEEEEESC
T ss_pred CCCceEEecCeEEEeccccccCcccccccccccccccccccccccccccCCchhccCCchhhhhc-cCCCCCEEEEEeCC
Confidence 89999999997655421 0 0 011344333 3456 888 89999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCccccccccCccccCccccceeecCCCCCCCCCCCCCCCchhhhhhhcccccCCCcccccCCc
Q 048043 151 ITPGHPSFSDEGMPPPPAKWKGKCEFKGAACNNKLIGARNFLQGSTGEPPLDDEGHGTHTATTAAGNFVNGANVFGQADG 230 (742)
Q Consensus 151 id~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~n~ki~~~~~~~~~~~~~~~~d~~gHGThVAGiiaG~~~~~~~~~g~~~g 230 (742)
||++||+|.++- +.+.. + ..+ .....+ .+..|..||||||||||||.. ++.|
T Consensus 165 Vd~~HpdL~~~~-------~~g~~-----~----~~~-~~~p~~---~d~~d~~gHGThVAGiIAa~~--------ng~g 216 (671)
T 1r6v_A 165 VDGTHPDLEGQV-------IAGYR-----P----AFD-EELPAG---TDSSYGGSAGTHVAGTIAAKK--------DGKG 216 (671)
T ss_dssp CBTTSGGGTTTB-------CCEEE-----G----GGT-EEECTT---CBCCTTCSHHHHHHHHHHCCC--------SSSS
T ss_pred CCCCCccccccE-------Eeccc-----c----cCC-CcCCCC---CCCccCCCcchhhhhhhhccC--------CCCc
Confidence 999999998641 11100 0 000 001111 234567899999999999873 1122
Q ss_pred ceeeecCcceEEEEEEecc------CC-CCHHHHHHHHHHhhhCCCcEEEEccCCCCCCCCCCHHHHHHHHhhcCCcEEE
Q 048043 231 TAVGIAPLAHLAIYKVCDF------DG-CSESRVYAAMDTAIDDGVDVLSLSLGAASVPFFEDPLAIGSFSAIQKEIFVS 303 (742)
Q Consensus 231 ~~~GvAP~A~l~~~kv~~~------~g-~~~~~i~~ai~~a~~~g~~VIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV 303 (742)
+.||||+|+|+.+|+++. .+ ...+.+++||+||+++|++|||||||+.. +...+..++..+.++|+++|
T Consensus 217 -v~GVAP~A~I~~vkv~~~~~~~~g~g~~s~~~i~~ai~~A~~~gadVIN~SlG~~~---~s~~l~~Ai~~A~~~GvlvV 292 (671)
T 1r6v_A 217 -IVGVAPGAKIMPIVIFDDPALVGGNGYVGDDYVAAGIIWATDHGAKVMNHSWGGWG---YSYTMKEAFDYAMEHGVVMV 292 (671)
T ss_dssp -CCCSCTTSEEEEEESBCCHHHHCTTSBCCHHHHHHHHHHHHHTTCSEEEECEEBSC---CCHHHHHHHHHHHHTTCEEE
T ss_pred -eEEECCCCEEEEEEeccCccccCCCCccCHHHHHHHHHHHHHcCCCEEEeCCCCCC---CCHHHHHHHHHHHhCCCEEE
Confidence 479999999999999976 23 44567999999999999999999999863 34577888889999999999
Q ss_pred EecCCCCCCC-CCCCCCCCceEEecccCCcceeEEEEEeCCCeeEeeeeccCCCCCCCCceeEEecCCCCCCCCCCcCCC
Q 048043 304 CSAGNEGPNP-STSSNEAPWILSVGASTTDRSIVASVELGNQAVYDGEALFQPKDFPSKQFPLIYPGANGNVSSAQCSPG 382 (742)
Q Consensus 304 ~AAGN~g~~~-~~~~~~~p~vitVga~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~ 382 (742)
+||||+|.+. ..+++..|++|+|||...+.
T Consensus 293 aAAGN~g~~~~~~yPA~~~~VItVgA~d~~g------------------------------------------------- 323 (671)
T 1r6v_A 293 VSAGNNTSDSHHQYPAGYPGVIQVAALDYYG------------------------------------------------- 323 (671)
T ss_dssp EECCSCSSSCCCCBTTTSTTCEEEEEEEEET-------------------------------------------------
T ss_pred EeCCCCCCCCCccCcccCCCeEEEEEEcCCC-------------------------------------------------
Confidence 9999999875 56778899999999952110
Q ss_pred CCCCCccceEEEeecCCcchhhhhHHHhhcCCeEEEEeccCCCCccccCCCccccEEEEehhhHHHHHHHHhcCCCCeEE
Q 048043 383 SLSSNIRGKLVLCERGGGERTKKGQVVKDAGGIGMILMNDKLNGYSTLADPHLLPAVHVSYAAGESIKAYINSTSSPNAT 462 (742)
Q Consensus 383 ~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~ 462 (742)
T Consensus 324 -------------------------------------------------------------------------------- 323 (671)
T 1r6v_A 324 -------------------------------------------------------------------------------- 323 (671)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeceeEecccCCCccccccCCCCCCCCCCCcccceEecCCcEEeccCCCccC---------CCCCcccceeeccccchh
Q 048043 463 IVFKGTVIGKKSTPELASFSSRGPSIASPGILKPDIIGPGVNILAAWPFSVEN---------KTNTKSTFNMVAGTSMSC 533 (742)
Q Consensus 463 i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~---------~~~~~~~y~~~sGTSmAa 533 (742)
....+++|||+||.. ||+|||++|+++++..... .....+.|..++||||||
T Consensus 324 -----------~~~~~a~fSn~G~~v--------dv~APG~~I~St~p~~~~~g~~~~~~~~~~~~~~~y~~~sGTSmAA 384 (671)
T 1r6v_A 324 -----------GTFRVAGFSSRSDGV--------SVGAPGVTILSTVPGEDSIGYEGHNENVPATNGGTYDYYQGTSMAA 384 (671)
T ss_dssp -----------TEEEECSSSCCCTTE--------EEEEECSSEEEECCCTTSTTCCCCCTTCCCSSSCCEEEEESHHHHH
T ss_pred -----------CceeeccccCCCCCe--------eEEecCCCEEeecCCCCccccccccccccccCCCceEEecCccHHH
Confidence 001478999999976 9999999999998763210 011235799999999999
Q ss_pred HHHHHHHHHHHhhCCCCCHHHHHHHHHcccccccCCCCccccCCCCCCCCCcccccccCcCCcCCCCccccCCCCCc
Q 048043 534 PHLSGVAALLKSAHPDWSPAAIKSAIMTTADIVSLDGKPIVDQRLLPADMFAVGAGHVNPSSANDPGLIYDIQPDDY 610 (742)
Q Consensus 534 P~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vd~~~Al~~~lv~~~~~~d~ 610 (742)
|||||++|||+|++|++++.+||++|++||+++... ..+..||||+||+.+|++..+..+....+|
T Consensus 385 P~VAGvaALl~s~~P~lt~~~Vr~~L~~TA~~~~~~-----------g~d~~~G~G~vna~~Al~~~l~~~~~~~~~ 450 (671)
T 1r6v_A 385 PHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFNGN-----------GWDHDTGYGLVKLDAALQGPLPTQGGVEEF 450 (671)
T ss_dssp HHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCSSSS-----------SCBTTTBTCBCCHHHHHHCCCCSSSEEEEE
T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcCCCCC-----------CCCCCcccceeCHHHHhhhhcCCCCCccce
Confidence 999999999999999999999999999999987533 245689999999999999877766544333
No 10
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=100.00 E-value=6.9e-53 Score=438.60 Aligned_cols=261 Identities=33% Similarity=0.517 Sum_probs=222.4
Q ss_pred cCccC--CCCCccCCCCCCccEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCccccCccccceeecCCCCCCCCCC
Q 048043 124 LGLHQ--NSGFWKDSNLGKGVIIGVMDTGITPGHPSFSDEGMPPPPAKWKGKCEFKGAACNNKLIGARNFLQGSTGEPPL 201 (742)
Q Consensus 124 ~g~~~--~~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~n~ki~~~~~~~~~~~~~~~~ 201 (742)
|++.. ++.+|..+++|+||+|+|||||| .+||+|+ +...++|..+. ..+.
T Consensus 6 W~l~~i~~~~a~~~g~~G~gv~VaViDtGi-~~h~~l~-------------------------~~~~~~~~~~~--~~~~ 57 (269)
T 1gci_A 6 WGISRVQAPAAHNRGLTGSGVKVAVLDTGI-STHPDLN-------------------------IRGGASFVPGE--PSTQ 57 (269)
T ss_dssp HHHHHTTHHHHHHTTCSCTTCEEEEEESCC-CCCTTCC-------------------------EEEEEECSTTC--CSCS
T ss_pred cChhhcCcHHHHhcCCCCCCCEEEEECCCC-CCCHhhc-------------------------ccCCcccCCCC--CCCC
Confidence 45443 45689999999999999999999 8999994 12234555432 3467
Q ss_pred CCCCCchhhhhhhcccccCCCcccccCCcceeeecCcceEEEEEEeccCC-CCHHHHHHHHHHhhhCCCcEEEEccCCCC
Q 048043 202 DDEGHGTHTATTAAGNFVNGANVFGQADGTAVGIAPLAHLAIYKVCDFDG-CSESRVYAAMDTAIDDGVDVLSLSLGAAS 280 (742)
Q Consensus 202 d~~gHGThVAGiiaG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g~~VIn~SlG~~~ 280 (742)
|..||||||||||+|... .. .+.||||+|+|+.+|+++..+ +..+++++||+|+++++++|||||||...
T Consensus 58 d~~gHGT~vAgiia~~~~--------~~-~~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~Vin~S~G~~~ 128 (269)
T 1gci_A 58 DGNGHGTHVAGTIAALNN--------SI-GVLGVAPSAELYAVKVLGASGSGSVSSIAQGLEWAGNNGMHVANLSLGSPS 128 (269)
T ss_dssp CSSSHHHHHHHHHHCCCS--------SS-BCCCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHHTTCSEEEECCCBSS
T ss_pred CCCCChHHHHHHHhcCcC--------CC-CcEEeCCCCEEEEEEeECCCCCcCHHHHHHHHHHHHHCCCeEEEeCCCCCC
Confidence 899999999999998621 11 247999999999999998776 77889999999999999999999999873
Q ss_pred CCCCCCHHHHHHHHhhcCCcEEEEecCCCCCCCCCCCCCCCceEEecccCCcceeEEEEEeCCCeeEeeeeccCCCCCCC
Q 048043 281 VPFFEDPLAIGSFSAIQKEIFVSCSAGNEGPNPSTSSNEAPWILSVGASTTDRSIVASVELGNQAVYDGEALFQPKDFPS 360 (742)
Q Consensus 281 ~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 360 (742)
....+..++.++.++|+++|+||||+|.....+++..+++|+||+..
T Consensus 129 ---~~~~~~~ai~~a~~~gv~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~------------------------------ 175 (269)
T 1gci_A 129 ---PSATLEQAVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATD------------------------------ 175 (269)
T ss_dssp ---CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEEC------------------------------
T ss_pred ---CCHHHHHHHHHHHHCCCEEEEecCCCCCCCCcCCccCCCeEEEEeec------------------------------
Confidence 24577788888999999999999999998888888999999999842
Q ss_pred CceeEEecCCCCCCCCCCcCCCCCCCCccceEEEeecCCcchhhhhHHHhhcCCeEEEEeccCCCCccccCCCccccEEE
Q 048043 361 KQFPLIYPGANGNVSSAQCSPGSLSSNIRGKLVLCERGGGERTKKGQVVKDAGGIGMILMNDKLNGYSTLADPHLLPAVH 440 (742)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~p~~~ 440 (742)
T Consensus 176 -------------------------------------------------------------------------------- 175 (269)
T 1gci_A 176 -------------------------------------------------------------------------------- 175 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EehhhHHHHHHHHhcCCCCeEEEEeceeEecccCCCccccccCCCCCCCCCCCcccceEecCCcEEeccCCCccCCCCCc
Q 048043 441 VSYAAGESIKAYINSTSSPNATIVFKGTVIGKKSTPELASFSSRGPSIASPGILKPDIIGPGVNILAAWPFSVENKTNTK 520 (742)
Q Consensus 441 i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~ 520 (742)
..+.+++||++||.+ ||+|||++|+++++.
T Consensus 176 ---------------------------------~~~~~~~~S~~G~~~--------di~APG~~i~s~~~~--------- 205 (269)
T 1gci_A 176 ---------------------------------QNNNRASFSQYGAGL--------DIVAPGVNVQSTYPG--------- 205 (269)
T ss_dssp ---------------------------------TTSCBCTTCCCSTTE--------EEEEECSSEEEEETT---------
T ss_pred ---------------------------------CCCCCCCCCCCCCCc--------ceEecCCCeEeecCC---------
Confidence 123678999999865 999999999999887
Q ss_pred ccceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHcccccccCCCCccccCCCCCCCCCcccccccCcCCcCC
Q 048043 521 STFNMVAGTSMSCPHLSGVAALLKSAHPDWSPAAIKSAIMTTADIVSLDGKPIVDQRLLPADMFAVGAGHVNPSSAND 598 (742)
Q Consensus 521 ~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vd~~~Al~ 598 (742)
+.|..++|||||||||||++|||+|++|+|++.|||++|++||+++. ++..||+|+||+.+|++
T Consensus 206 ~~~~~~sGTS~AaP~vaG~aAll~~~~p~~t~~~v~~~L~~tA~~~g--------------~~~~~G~G~vn~~~A~~ 269 (269)
T 1gci_A 206 STYASLNGTSMATPHVAGAAALVKQKNPSWSNVQIRNHLKNTATSLG--------------STNLYGSGLVNAEAATR 269 (269)
T ss_dssp TEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTSBCCS--------------CHHHHTTCBCCHHHHTC
T ss_pred CCEEEcCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC--------------CCCCcccCccCHHHHcC
Confidence 78999999999999999999999999999999999999999999773 34679999999999985
No 11
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=100.00 E-value=5.7e-53 Score=440.97 Aligned_cols=262 Identities=31% Similarity=0.496 Sum_probs=220.6
Q ss_pred cCccC--CCCCccCCCCCCccEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCccccCccccceeecCCCCCCCCCC
Q 048043 124 LGLHQ--NSGFWKDSNLGKGVIIGVMDTGITPGHPSFSDEGMPPPPAKWKGKCEFKGAACNNKLIGARNFLQGSTGEPPL 201 (742)
Q Consensus 124 ~g~~~--~~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~n~ki~~~~~~~~~~~~~~~~ 201 (742)
|++.. ++.+|..+++|+||+|||||||||++||+|+ +...++|..+. ....
T Consensus 6 w~l~~i~~~~~~~~g~~G~gv~VaViDtGid~~h~~l~-------------------------~~~g~~~~~~~--~~~~ 58 (274)
T 1r0r_E 6 YGIPLIKADKVQAQGFKGANVKVAVLDTGIQASHPDLN-------------------------VVGGASFVAGE--AYNT 58 (274)
T ss_dssp THHHHTTHHHHHHHTCSCTTCEEEEEESCCCTTCTTCC-------------------------EEEEEECSTTC--CTTC
T ss_pred CchhhcCCHHHHhcCCCCCCCEEEEEcCCCCCCCHhHc-------------------------CCCCccccCCC--CCCC
Confidence 45443 4568999999999999999999999999994 12234454432 3456
Q ss_pred CCCCCchhhhhhhcccccCCCcccccCCcceeeecCcceEEEEEEeccCC-CCHHHHHHHHHHhhhCCCcEEEEccCCCC
Q 048043 202 DDEGHGTHTATTAAGNFVNGANVFGQADGTAVGIAPLAHLAIYKVCDFDG-CSESRVYAAMDTAIDDGVDVLSLSLGAAS 280 (742)
Q Consensus 202 d~~gHGThVAGiiaG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g~~VIn~SlG~~~ 280 (742)
|..||||||||||+|... .. .+.||||+|+|+.+|+++..+ ++.++++++|+|+++++++|||||||...
T Consensus 59 d~~gHGT~vAgiia~~~~--------~~-g~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai~~a~~~~~~Vin~S~G~~~ 129 (274)
T 1r0r_E 59 DGNGHGTHVAGTVAALDN--------TT-GVLGVAPSVSLYAVKVLNSSGSGSYSGIVSGIEWATTNGMDVINMSLGGAS 129 (274)
T ss_dssp CSSSHHHHHHHHHHCCSS--------SS-BCCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHHHTTCSEEEECEEBSS
T ss_pred CCCCCHHHHHHHHHccCC--------CC-ceEEECCCCEEEEEEEECCCCCccHHHHHHHHHHHHHcCCCEEEeCCCCCC
Confidence 889999999999998621 11 247999999999999998877 77889999999999999999999999874
Q ss_pred CCCCCCHHHHHHHHhhcCCcEEEEecCCCCCCC----CCCCCCCCceEEecccCCcceeEEEEEeCCCeeEeeeeccCCC
Q 048043 281 VPFFEDPLAIGSFSAIQKEIFVSCSAGNEGPNP----STSSNEAPWILSVGASTTDRSIVASVELGNQAVYDGEALFQPK 356 (742)
Q Consensus 281 ~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~----~~~~~~~p~vitVga~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 356 (742)
....+..++.++.++|+++|+||||+|... ..++...+++|+||+..
T Consensus 130 ---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~-------------------------- 180 (274)
T 1r0r_E 130 ---GSTAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVD-------------------------- 180 (274)
T ss_dssp ---CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTCCCCCBTTTSTTSEEEEEEC--------------------------
T ss_pred ---CcHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCccccCCCCCCcEEEEEEec--------------------------
Confidence 245778888899999999999999999763 45577788999999842
Q ss_pred CCCCCceeEEecCCCCCCCCCCcCCCCCCCCccceEEEeecCCcchhhhhHHHhhcCCeEEEEeccCCCCccccCCCccc
Q 048043 357 DFPSKQFPLIYPGANGNVSSAQCSPGSLSSNIRGKLVLCERGGGERTKKGQVVKDAGGIGMILMNDKLNGYSTLADPHLL 436 (742)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~ 436 (742)
T Consensus 181 -------------------------------------------------------------------------------- 180 (274)
T 1r0r_E 181 -------------------------------------------------------------------------------- 180 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cEEEEehhhHHHHHHHHhcCCCCeEEEEeceeEecccCCCccccccCCCCCCCCCCCcccceEecCCcEEeccCCCccCC
Q 048043 437 PAVHVSYAAGESIKAYINSTSSPNATIVFKGTVIGKKSTPELASFSSRGPSIASPGILKPDIIGPGVNILAAWPFSVENK 516 (742)
Q Consensus 437 p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~ 516 (742)
..+.++.||++||. |||+|||.+|+++++.
T Consensus 181 -------------------------------------~~~~~~~~S~~G~~--------~di~APG~~i~s~~~~----- 210 (274)
T 1r0r_E 181 -------------------------------------SNSNRASFSSVGAE--------LEVMAPGAGVYSTYPT----- 210 (274)
T ss_dssp -------------------------------------TTSCBCTTCCCSTT--------EEEEEECSSEEEEETT-----
T ss_pred -------------------------------------CCCCcCccCCCCCC--------ceEEeCCCCeEeecCC-----
Confidence 12367899999985 4999999999999887
Q ss_pred CCCcccceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHcccccccCCCCccccCCCCCCCCCcccccccCcCCc
Q 048043 517 TNTKSTFNMVAGTSMSCPHLSGVAALLKSAHPDWSPAAIKSAIMTTADIVSLDGKPIVDQRLLPADMFAVGAGHVNPSSA 596 (742)
Q Consensus 517 ~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vd~~~A 596 (742)
+.|..++|||||||||||++|||+|++|++++++||++|++||+++. ++..||+|+||+.+|
T Consensus 211 ----~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g--------------~~~~~G~G~~~~~~A 272 (274)
T 1r0r_E 211 ----NTYATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTATYLG--------------SSFYYGKGLINVEAA 272 (274)
T ss_dssp ----TEEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCCS--------------CHHHHTTCBCCHHHH
T ss_pred ----CCEEEeccHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcccC--------------CCCCcccCccCHHHH
Confidence 78999999999999999999999999999999999999999999772 346899999999999
Q ss_pred CC
Q 048043 597 ND 598 (742)
Q Consensus 597 l~ 598 (742)
++
T Consensus 273 ~~ 274 (274)
T 1r0r_E 273 AQ 274 (274)
T ss_dssp TC
T ss_pred hC
Confidence 85
No 12
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=100.00 E-value=2.1e-52 Score=437.87 Aligned_cols=265 Identities=31% Similarity=0.431 Sum_probs=216.6
Q ss_pred ccCccC--CCCCccCCCCCCccEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCccccCccccceeecCCCCCCCCC
Q 048043 123 FLGLHQ--NSGFWKDSNLGKGVIIGVMDTGITPGHPSFSDEGMPPPPAKWKGKCEFKGAACNNKLIGARNFLQGSTGEPP 200 (742)
Q Consensus 123 ~~g~~~--~~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~n~ki~~~~~~~~~~~~~~~ 200 (742)
+|++.. +..+|+.+..|+||+|||||||||++||+|.++ ++..++|.++. ..+
T Consensus 12 ~w~l~~i~~~~aw~~~~g~~gv~VaViDtGvd~~hp~l~~~-----------------------~~~~~~~~~~~--~~~ 66 (280)
T 1dbi_A 12 QYGPQNTYTDYAWDVTKGSSGQEIAVIDTGVDYTHPDLDGK-----------------------VIKGYDFVDND--YDP 66 (280)
T ss_dssp CCTTGGGTHHHHTTTCCCCTTCEEEEEESCCCTTSTTTTTT-----------------------EEEEEETTTTB--SCC
T ss_pred CCChhhcCcHHHHhhcCCCCCCEEEEEeCCcCCCChhhccC-----------------------cccceeccCCC--CCC
Confidence 355544 456899988888999999999999999999753 34456666543 456
Q ss_pred CCCCCCchhhhhhhcccccCCCcccccCCcceeeecCcceEEEEEEeccCC-CCHHHHHHHHHHhhhCCCcEEEEccCCC
Q 048043 201 LDDEGHGTHTATTAAGNFVNGANVFGQADGTAVGIAPLAHLAIYKVCDFDG-CSESRVYAAMDTAIDDGVDVLSLSLGAA 279 (742)
Q Consensus 201 ~d~~gHGThVAGiiaG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g~~VIn~SlG~~ 279 (742)
.|..+|||||||||+|...+. ..+.||||+|+|+.+|+++..+ ++.+++++||+||+++|++|||||||..
T Consensus 67 ~d~~gHGT~vAgiia~~~~~~--------~g~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~g~~Vin~S~G~~ 138 (280)
T 1dbi_A 67 MDLNNHGTHVAGIAAAETNNA--------TGIAGMAPNTRILAVRALDRNGSGTLSDIADAIIYAADSGAEVINLSLGCD 138 (280)
T ss_dssp CCSSSHHHHHHHHHHCCCSSS--------SSCCCSSSSCEEEEEECCCTTSCCCHHHHHHHHHHHHHTTCSEEEECCSSC
T ss_pred CCCCCcHHHHHHHHhCcCCCC--------CcceEeCCCCEEEEEEEECCCCCcCHHHHHHHHHHHHHCCCCEEEeCCCCC
Confidence 789999999999999874221 1247999999999999998877 7888999999999999999999999986
Q ss_pred CCCCCCCHHHHHHHHhhcCCcEEEEecCCCCCCCCCCCCCCCceEEecccCCcceeEEEEEeCCCeeEeeeeccCCCCCC
Q 048043 280 SVPFFEDPLAIGSFSAIQKEIFVSCSAGNEGPNPSTSSNEAPWILSVGASTTDRSIVASVELGNQAVYDGEALFQPKDFP 359 (742)
Q Consensus 280 ~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 359 (742)
. ....+..++.++.++|+++|+||||+|.....+++..+++|+||+..
T Consensus 139 ~---~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~----------------------------- 186 (280)
T 1dbi_A 139 C---HTTTLENAVNYAWNKGSVVVAAAGNNGSSTTFEPASYENVIAVGAVD----------------------------- 186 (280)
T ss_dssp C---CCHHHHHHHHHHHHTTCEEEEECCBC---------CCTTSEEEEEEC-----------------------------
T ss_pred C---CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCCeEEEEeeC-----------------------------
Confidence 3 34577888888999999999999999988777888899999999842
Q ss_pred CCceeEEecCCCCCCCCCCcCCCCCCCCccceEEEeecCCcchhhhhHHHhhcCCeEEEEeccCCCCccccCCCccccEE
Q 048043 360 SKQFPLIYPGANGNVSSAQCSPGSLSSNIRGKLVLCERGGGERTKKGQVVKDAGGIGMILMNDKLNGYSTLADPHLLPAV 439 (742)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~p~~ 439 (742)
T Consensus 187 -------------------------------------------------------------------------------- 186 (280)
T 1dbi_A 187 -------------------------------------------------------------------------------- 186 (280)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEehhhHHHHHHHHhcCCCCeEEEEeceeEecccCCCccccccCCCCCCCCCCCcccceEecCCcEEeccCCCccCCCCC
Q 048043 440 HVSYAAGESIKAYINSTSSPNATIVFKGTVIGKKSTPELASFSSRGPSIASPGILKPDIIGPGVNILAAWPFSVENKTNT 519 (742)
Q Consensus 440 ~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~ 519 (742)
..+.+++||++||.. ||+|||++|+++++.
T Consensus 187 ----------------------------------~~~~~~~~S~~G~~~--------dv~ApG~~i~s~~~~-------- 216 (280)
T 1dbi_A 187 ----------------------------------QYDRLASFSNYGTWV--------DVVAPGVDIVSTITG-------- 216 (280)
T ss_dssp ----------------------------------TTSCBCTTBCCSTTC--------CEEEECSSEEEEETT--------
T ss_pred ----------------------------------CCCCcCCCCCCCCCc--------eEEEecCCeEeecCC--------
Confidence 123678999999865 999999999999887
Q ss_pred cccceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHcccccccCCCCccccCCCCCCCCCcccccccCcCCcCC
Q 048043 520 KSTFNMVAGTSMSCPHLSGVAALLKSAHPDWSPAAIKSAIMTTADIVSLDGKPIVDQRLLPADMFAVGAGHVNPSSAND 598 (742)
Q Consensus 520 ~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vd~~~Al~ 598 (742)
+.|..++|||||||||||++|||++ |++++.+||++|++||+++.. ....||+|+||+.+|++
T Consensus 217 -~~~~~~sGTS~AaP~vaG~aAll~~--p~~t~~~v~~~L~~ta~~~~~-------------~~~~~G~G~vn~~~A~~ 279 (280)
T 1dbi_A 217 -NRYAYMSGTSMASPHVAGLAALLAS--QGRNNIEIRQAIEQTADKISG-------------TGTYFKYGRINSYNAVT 279 (280)
T ss_dssp -TEEEEECSHHHHHHHHHHHHHHHHH--TTCCHHHHHHHHHHTSBCCTT-------------BTTTBSSEECCHHHHHT
T ss_pred -CCEEEccCHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHhCccCCC-------------CCCcccCCEECHHHHhc
Confidence 7899999999999999999999987 899999999999999998742 22469999999999875
No 13
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=100.00 E-value=2e-52 Score=438.12 Aligned_cols=264 Identities=33% Similarity=0.524 Sum_probs=221.0
Q ss_pred cCccC--CCCCccCCCCCCccEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCccccCccccceeecCCCCCCCCCC
Q 048043 124 LGLHQ--NSGFWKDSNLGKGVIIGVMDTGITPGHPSFSDEGMPPPPAKWKGKCEFKGAACNNKLIGARNFLQGSTGEPPL 201 (742)
Q Consensus 124 ~g~~~--~~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~n~ki~~~~~~~~~~~~~~~~ 201 (742)
|++.. ...+|..+++|+||+|||||||||++||+|+. ...++|..+. .....
T Consensus 6 w~l~~i~~~~~~~~g~~G~gv~VaViDtGid~~h~~l~~-------------------------~~g~~~~~~~-~~~~~ 59 (281)
T 1to2_E 6 YGVSQIKAPALHSQGYTGSNVKVAVIDSGIDSSHPDLKV-------------------------AGGASMVPSE-TNPFQ 59 (281)
T ss_dssp HHHHHTTHHHHHHHTCSCTTCEEEEEESCCCTTCTTCCE-------------------------EEEEECCTTC-CCTTC
T ss_pred cchhhcChHHHHhcCCCCCCCEEEEEcCCCCCCCHHHcC-------------------------cCCccccCCC-CCCCC
Confidence 55543 35689999999999999999999999999952 1223444321 12236
Q ss_pred CCCCCchhhhhhhcccccCCCcccccCCcceeeecCcceEEEEEEeccCC-CCHHHHHHHHHHhhhCCCcEEEEccCCCC
Q 048043 202 DDEGHGTHTATTAAGNFVNGANVFGQADGTAVGIAPLAHLAIYKVCDFDG-CSESRVYAAMDTAIDDGVDVLSLSLGAAS 280 (742)
Q Consensus 202 d~~gHGThVAGiiaG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g~~VIn~SlG~~~ 280 (742)
|..||||||||||+|... .. .+.||||+|+|+.+|+++.++ +..++++++|+|+++++++|||||||...
T Consensus 60 d~~gHGT~vAgiia~~~~--------~~-g~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~Vin~S~G~~~ 130 (281)
T 1to2_E 60 DNNSHGTHVAGTVAALNN--------SI-GVLGVAPSASLYAVKVLGADGSGQYSWIINGIEWAIANNMDVINMSLGGPS 130 (281)
T ss_dssp CSSSHHHHHHHHHHCCSS--------SS-SBCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHHHTTCSEEEECEEBSC
T ss_pred CCCCcHHHHHHHHhccCC--------CC-cceeeCCCCEEEEEEEeCCCCCccHHHHHHHHHHHHHCCCcEEEECCcCCC
Confidence 889999999999998621 11 247999999999999998776 77889999999999999999999999873
Q ss_pred CCCCCCHHHHHHHHhhcCCcEEEEecCCCCCCC----CCCCCCCCceEEecccCCcceeEEEEEeCCCeeEeeeeccCCC
Q 048043 281 VPFFEDPLAIGSFSAIQKEIFVSCSAGNEGPNP----STSSNEAPWILSVGASTTDRSIVASVELGNQAVYDGEALFQPK 356 (742)
Q Consensus 281 ~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~----~~~~~~~p~vitVga~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 356 (742)
....+..++.++.++|+++|+||||+|... ..++...|++|+||+..
T Consensus 131 ---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~-------------------------- 181 (281)
T 1to2_E 131 ---GSAALKAAVDKAVASGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVD-------------------------- 181 (281)
T ss_dssp ---CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTSCCCCBTTTSTTSEEEEEEC--------------------------
T ss_pred ---CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCcCCCCEEEEEEec--------------------------
Confidence 245778888889999999999999999763 45677889999999842
Q ss_pred CCCCCceeEEecCCCCCCCCCCcCCCCCCCCccceEEEeecCCcchhhhhHHHhhcCCeEEEEeccCCCCccccCCCccc
Q 048043 357 DFPSKQFPLIYPGANGNVSSAQCSPGSLSSNIRGKLVLCERGGGERTKKGQVVKDAGGIGMILMNDKLNGYSTLADPHLL 436 (742)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~ 436 (742)
T Consensus 182 -------------------------------------------------------------------------------- 181 (281)
T 1to2_E 182 -------------------------------------------------------------------------------- 181 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cEEEEehhhHHHHHHHHhcCCCCeEEEEeceeEecccCCCccccccCCCCCCCCCCCcccceEecCCcEEeccCCCccCC
Q 048043 437 PAVHVSYAAGESIKAYINSTSSPNATIVFKGTVIGKKSTPELASFSSRGPSIASPGILKPDIIGPGVNILAAWPFSVENK 516 (742)
Q Consensus 437 p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~ 516 (742)
..+.+++||++||.. ||+|||.+|+++++.
T Consensus 182 -------------------------------------~~~~~~~fS~~G~~~--------di~APG~~i~s~~~~----- 211 (281)
T 1to2_E 182 -------------------------------------SSNQRASFSSVGPEL--------DVMAPGVSIQSTLPG----- 211 (281)
T ss_dssp -------------------------------------TTSCBCTTCCCSTTC--------CEEEECSSEEEEETT-----
T ss_pred -------------------------------------CCCCcCCcCCCCCCc--------eEEecCCCeEeecCC-----
Confidence 123678999999865 999999999999887
Q ss_pred CCCcccceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHcccccccCCCCccccCCCCCCCCCcccccccCcCCc
Q 048043 517 TNTKSTFNMVAGTSMSCPHLSGVAALLKSAHPDWSPAAIKSAIMTTADIVSLDGKPIVDQRLLPADMFAVGAGHVNPSSA 596 (742)
Q Consensus 517 ~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vd~~~A 596 (742)
+.|..++|||||||||||++|||+|++|+|++++||++|++||+++. ++..||||+||+.+|
T Consensus 212 ----~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g--------------~~~~~G~G~v~~~~a 273 (281)
T 1to2_E 212 ----NKYGAYNGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLG--------------DSFYYGKGLINVQAA 273 (281)
T ss_dssp ----TEEEEECBHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHTTCBCCS--------------CHHHHTTCBCCHHHH
T ss_pred ----CCEEecCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccC--------------CCCCcccceecHHHH
Confidence 78999999999999999999999999999999999999999999872 356899999999999
Q ss_pred CCC
Q 048043 597 NDP 599 (742)
Q Consensus 597 l~~ 599 (742)
+++
T Consensus 274 ~~~ 276 (281)
T 1to2_E 274 AQH 276 (281)
T ss_dssp TSS
T ss_pred hhh
Confidence 985
No 14
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=100.00 E-value=1e-51 Score=432.54 Aligned_cols=258 Identities=32% Similarity=0.474 Sum_probs=220.3
Q ss_pred CCCCccCCCCCCccEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCccccCccccceeecCCCCCCCCCCCCCCCch
Q 048043 129 NSGFWKDSNLGKGVIIGVMDTGITPGHPSFSDEGMPPPPAKWKGKCEFKGAACNNKLIGARNFLQGSTGEPPLDDEGHGT 208 (742)
Q Consensus 129 ~~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~n~ki~~~~~~~~~~~~~~~~d~~gHGT 208 (742)
++.+|+.. +|+||+|||||||||++||+|.++ ++..++|.++. ..+.|..+|||
T Consensus 20 ~~~aw~~~-~G~gv~VaViDtGvd~~h~~l~~~-----------------------~~~~~~~~~~~--~~~~d~~gHGT 73 (279)
T 1thm_A 20 APQAWDIA-EGSGAKIAIVDTGVQSNHPDLAGK-----------------------VVGGWDFVDND--STPQNGNGHGT 73 (279)
T ss_dssp HHHHHTTC-CCTTCEEEEEESCCCTTCTTTTTT-----------------------EEEEEETTTTB--SCCCCSSSHHH
T ss_pred hHHHHhcC-CCCCCEEEEEccCCCCCCcchhcC-----------------------ccccccccCCC--CCCCCCCCcHH
Confidence 45689887 799999999999999999999753 34455666543 45678999999
Q ss_pred hhhhhhcccccCCCcccccCCcceeeecCcceEEEEEEeccCC-CCHHHHHHHHHHhhhCCCcEEEEccCCCCCCCCCCH
Q 048043 209 HTATTAAGNFVNGANVFGQADGTAVGIAPLAHLAIYKVCDFDG-CSESRVYAAMDTAIDDGVDVLSLSLGAASVPFFEDP 287 (742)
Q Consensus 209 hVAGiiaG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g~~VIn~SlG~~~~~~~~~~ 287 (742)
||||||+|...++ . .+.||||+|+|+.+|+++..+ ++.+++++||+||++++++|||||||... ....
T Consensus 74 ~vAgiia~~~~n~-------~-g~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~g~~Vin~S~G~~~---~~~~ 142 (279)
T 1thm_A 74 HCAGIAAAVTNNS-------T-GIAGTAPKASILAVRVLDNSGSGTWTAVANGITYAADQGAKVISLSLGGTV---GNSG 142 (279)
T ss_dssp HHHHHHHCCCSSS-------S-SCCCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHTTCSEEEECCCBSS---CCHH
T ss_pred HHHHHHhCccCCC-------C-ccEEeCCCCEEEEEEeeCCCCCccHHHHHHHHHHHHHCCCCEEEEecCCCC---CCHH
Confidence 9999999874321 1 247999999999999998776 77889999999999999999999999873 3457
Q ss_pred HHHHHHHhhcCCcEEEEecCCCCCCCCCCCCCCCceEEecccCCcceeEEEEEeCCCeeEeeeeccCCCCCCCCceeEEe
Q 048043 288 LAIGSFSAIQKEIFVSCSAGNEGPNPSTSSNEAPWILSVGASTTDRSIVASVELGNQAVYDGEALFQPKDFPSKQFPLIY 367 (742)
Q Consensus 288 ~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 367 (742)
+..++.++.++|+++|+||||+|.....+++..+++|+||+..
T Consensus 143 l~~ai~~a~~~gvlvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~------------------------------------- 185 (279)
T 1thm_A 143 LQQAVNYAWNKGSVVVAAAGNAGNTAPNYPAYYSNAIAVASTD------------------------------------- 185 (279)
T ss_dssp HHHHHHHHHHTTCEEEEECCSSSSCCCCBTTTSTTEEEEEEEC-------------------------------------
T ss_pred HHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEEeC-------------------------------------
Confidence 7888889999999999999999988888888899999999842
Q ss_pred cCCCCCCCCCCcCCCCCCCCccceEEEeecCCcchhhhhHHHhhcCCeEEEEeccCCCCccccCCCccccEEEEehhhHH
Q 048043 368 PGANGNVSSAQCSPGSLSSNIRGKLVLCERGGGERTKKGQVVKDAGGIGMILMNDKLNGYSTLADPHLLPAVHVSYAAGE 447 (742)
Q Consensus 368 ~~~~~~~~~~~c~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~ 447 (742)
T Consensus 186 -------------------------------------------------------------------------------- 185 (279)
T 1thm_A 186 -------------------------------------------------------------------------------- 185 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhcCCCCeEEEEeceeEecccCCCccccccCCCCCCCCCCCcccceEecCCcEEeccCCCccCCCCCcccceeec
Q 048043 448 SIKAYINSTSSPNATIVFKGTVIGKKSTPELASFSSRGPSIASPGILKPDIIGPGVNILAAWPFSVENKTNTKSTFNMVA 527 (742)
Q Consensus 448 ~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~y~~~s 527 (742)
..+.++.||++||.. ||+|||++|+++++. +.|..++
T Consensus 186 --------------------------~~~~~~~fS~~G~~~--------dv~APG~~i~s~~~~---------~~~~~~s 222 (279)
T 1thm_A 186 --------------------------QNDNKSSFSTYGSWV--------DVAAPGSSIYSTYPT---------STYASLS 222 (279)
T ss_dssp --------------------------TTSCBCTTCCCCTTC--------CEEEECSSEEEEETT---------TEEEEEC
T ss_pred --------------------------CCCCcCCcCCCCCce--------EEEEcCCCeEEEeCC---------CCEEEcc
Confidence 123678999999865 999999999999987 7899999
Q ss_pred cccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHcccccccCCCCccccCCCCCCCCCcccccccCcCCcCC
Q 048043 528 GTSMSCPHLSGVAALLKSAHPDWSPAAIKSAIMTTADIVSLDGKPIVDQRLLPADMFAVGAGHVNPSSAND 598 (742)
Q Consensus 528 GTSmAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vd~~~Al~ 598 (742)
|||||||||||++||| ++|.+++++||++|++||+++...+ ..||+|+||+.+|++
T Consensus 223 GTS~AaP~VaG~aAll--~~p~~t~~~v~~~L~~ta~~~~~~~-------------~~~G~G~vn~~~A~~ 278 (279)
T 1thm_A 223 GTSMATPHVAGVAGLL--ASQGRSASNIRAAIENTADKISGTG-------------TYWAKGRVNAYKAVQ 278 (279)
T ss_dssp SHHHHHHHHHHHHHHH--HTTTCCHHHHHHHHHHTCBCCTTBT-------------TTBSSEECCHHHHHH
T ss_pred cHHHHHHHHHHHHHHH--HCCCcCHHHHHHHHHHhCccCCCCC-------------ccccCCeeCHHHHhc
Confidence 9999999999999999 5799999999999999999875321 469999999999875
No 15
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=100.00 E-value=6.4e-53 Score=457.10 Aligned_cols=292 Identities=19% Similarity=0.215 Sum_probs=199.1
Q ss_pred CCCccCCCCCCccEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCccc---cCccc-----------cceeecCCCC
Q 048043 130 SGFWKDSNLGKGVIIGVMDTGITPGHPSFSDEGMPPPPAKWKGKCEFKGAA---CNNKL-----------IGARNFLQGS 195 (742)
Q Consensus 130 ~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f---~n~ki-----------~~~~~~~~~~ 195 (742)
.++|.++..|++|+|||||||||++||+|++....+....|+..++..... .+..+ .....+..+
T Consensus 21 ~~~w~~~~g~~~V~VaViDtGiD~~Hpdf~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 99 (357)
T 4h6x_A 21 ADLHNQTLGDPQITIVIIDGDPDYTLSCFEGAEVSKVFPYWHEPAEPITPEDYAAFQSIRDQGLKGKEKEEALEAVIPD- 99 (357)
T ss_dssp HHHHHHCSCCTTSEEEEEESCCCTTSGGGTTCEEEECCCTTSCCCCCCCHHHHHHHHHHHHHTCCSHHHHHHHHHHCTT-
T ss_pred HHHHHhcCCCCCCEEEEEcCCCCCCChhHcCCCcccccccccccccccCcccccccccccCccccccccccccccccCC-
Confidence 358999999999999999999999999999877777777887765533211 00000 000011111
Q ss_pred CCCCCCCCCCCchhhhhhhcccccCCCcccccCCcceeeecCcceEEEEEEeccC-----C-CCHHHHHHHHHHhhhCCC
Q 048043 196 TGEPPLDDEGHGTHTATTAAGNFVNGANVFGQADGTAVGIAPLAHLAIYKVCDFD-----G-CSESRVYAAMDTAIDDGV 269 (742)
Q Consensus 196 ~~~~~~d~~gHGThVAGiiaG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~-----g-~~~~~i~~ai~~a~~~g~ 269 (742)
..++.|.+||||||||||+|+.. +.+.||||+|+|+.+|++... + ....+++++|+|++++|+
T Consensus 100 -~~~~~D~~gHGThVAGiiag~~~----------~g~~GvAp~a~l~~~k~~~~~~~~~~~~~~~~~~~~ai~~a~~~g~ 168 (357)
T 4h6x_A 100 -TKDRIVLNDHACHVTSTIVGQEH----------SPVFGIAPNCRVINMPQDAVIRGNYDDVMSPLNLARAIDLALELGA 168 (357)
T ss_dssp -THHHHHHHHHHHHHHHHHHCCTT----------SSCCCSCTTSEEEEEECTTC----------CHHHHHHHHHHHHTTC
T ss_pred -CCCCcCCCCcHHHHHHHHhccCC----------CCceEeeccceEEeeeecccCCCCccccccHHHHHHHHHHHHHcCC
Confidence 12345678999999999998732 124799999999999997532 1 345578999999999999
Q ss_pred cEEEEccCCCC-CCCCCCHHHHHHHHhhcCCcEEEEecCCCCCCCCCCCCCCCceEEecccCCcceeEEEEEeCCCeeEe
Q 048043 270 DVLSLSLGAAS-VPFFEDPLAIGSFSAIQKEIFVSCSAGNEGPNPSTSSNEAPWILSVGASTTDRSIVASVELGNQAVYD 348 (742)
Q Consensus 270 ~VIn~SlG~~~-~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~~g~~~~ 348 (742)
+|||||||... .....+.+..++.++.++|+++|+||||+|.....+++..+++|+|||+.
T Consensus 169 ~Vin~S~G~~~~~~~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~------------------ 230 (357)
T 4h6x_A 169 NIIHCAFCRPTQTSEGEEILVQAIKKCQDNNVLIVSPTGNNSNESWCLPAVLPGTLAVGAAK------------------ 230 (357)
T ss_dssp SEEEEC-----------CHHHHHHHHHHHTTCEEEEECC---------------CEEEEEEC------------------
T ss_pred CEEeeccccCCccccchhHHHHHHHHHhhCCeEEEecccCCCCCcCcCcccCCCCceEEEec------------------
Confidence 99999999864 33456778888889999999999999999988888888899999999842
Q ss_pred eeeccCCCCCCCCceeEEecCCCCCCCCCCcCCCCCCCCccceEEEeecCCcchhhhhHHHhhcCCeEEEEeccCCCCcc
Q 048043 349 GEALFQPKDFPSKQFPLIYPGANGNVSSAQCSPGSLSSNIRGKLVLCERGGGERTKKGQVVKDAGGIGMILMNDKLNGYS 428 (742)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~ 428 (742)
T Consensus 231 -------------------------------------------------------------------------------- 230 (357)
T 4h6x_A 231 -------------------------------------------------------------------------------- 230 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCccccEEEEehhhHHHHHHHHhcCCCCeEEEEeceeEecccCCCccccccCCCCCCCCCCCcccceEecCCcEEec
Q 048043 429 TLADPHLLPAVHVSYAAGESIKAYINSTSSPNATIVFKGTVIGKKSTPELASFSSRGPSIASPGILKPDIIGPGVNILAA 508 (742)
Q Consensus 429 ~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa 508 (742)
..+.+++|||||+.. .||||+|||++|+++
T Consensus 231 ---------------------------------------------~~~~~~~fSn~G~~~-----~~~di~APG~~i~s~ 260 (357)
T 4h6x_A 231 ---------------------------------------------VDGTPCHFSNWGGNN-----TKEGILAPGEEILGA 260 (357)
T ss_dssp ---------------------------------------------TTSSBCTTCC---CT-----TTTEEEEECSSEEEC
T ss_pred ---------------------------------------------cCCcccccccCCCCC-----CccceeecCCCeEec
Confidence 124788999999753 589999999999999
Q ss_pred cCCCccCCCCCcccceeeccccchhHHHHHHHHHHHh----hCCCCCHHHHHHHHHcccccccCCCCccccCCCCCCCCC
Q 048043 509 WPFSVENKTNTKSTFNMVAGTSMSCPHLSGVAALLKS----AHPDWSPAAIKSAIMTTADIVSLDGKPIVDQRLLPADMF 584 (742)
Q Consensus 509 ~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q----~~p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~ 584 (742)
++.. +.|..++|||||||||||++|||++ ++|.|+++|||++|++||++++... ...+.
T Consensus 261 ~~~~--------~~~~~~sGTS~AaP~vaG~~All~s~~~~~~~~lt~~~v~~~L~~tA~~~~~~~---------~~~~~ 323 (357)
T 4h6x_A 261 QPCT--------EEPVRLTGTSMAAPVMTGISALLMSLQVQQGKPVDAEAVRTALLKTAIPCDPEV---------VEEPE 323 (357)
T ss_dssp CTTC--------SCCEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC----------------------
T ss_pred cCCC--------CcccccCcHHHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHhhCccCCCCC---------CCCcc
Confidence 8763 4677899999999999999999995 4678999999999999999875322 23456
Q ss_pred cccccccCcCCcCC
Q 048043 585 AVGAGHVNPSSAND 598 (742)
Q Consensus 585 ~~G~G~vd~~~Al~ 598 (742)
+||+|+||+.+|++
T Consensus 324 ~~G~G~vn~~~A~~ 337 (357)
T 4h6x_A 324 RCLRGFVNIPGAMK 337 (357)
T ss_dssp -CTTCBCCHHHHHH
T ss_pred cceeEEecHHHHHH
Confidence 89999999999987
No 16
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=100.00 E-value=4.3e-52 Score=444.89 Aligned_cols=269 Identities=29% Similarity=0.441 Sum_probs=219.1
Q ss_pred ccCccC--CCCCccCCCCCCccEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCccccCccccceeecCCCC--CCC
Q 048043 123 FLGLHQ--NSGFWKDSNLGKGVIIGVMDTGITPGHPSFSDEGMPPPPAKWKGKCEFKGAACNNKLIGARNFLQGS--TGE 198 (742)
Q Consensus 123 ~~g~~~--~~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~n~ki~~~~~~~~~~--~~~ 198 (742)
.|+++. +..+|..+++|+||+|||||||||++||+|.++ +...++|..++ +..
T Consensus 22 ~w~l~~i~~~~aw~~~~~G~gv~VaViDtGid~~Hp~l~~~-----------------------~~~~~~~~~~~~~~~~ 78 (327)
T 2x8j_A 22 PMGVEIVEAPAVWRASAKGAGQIIGVIDTGCQVDHPDLAER-----------------------IIGGVNLTTDYGGDET 78 (327)
T ss_dssp CHHHHHTTHHHHHHHHGGGTTCEEEEEESCCCTTCTTTGGG-----------------------EEEEEECSSGGGGCTT
T ss_pred CcchhhcChHHHHhcCCCCCCCEEEEEcCCCCCCChhHhhc-----------------------ccCCccccCCCCCCCC
Confidence 455543 456999999999999999999999999999742 33344554432 112
Q ss_pred CCCCCCCCchhhhhhhcccccCCCcccccCCcceeeecCcceEEEEEEeccCC-CCHHHHHHHHHHhhh------CCCcE
Q 048043 199 PPLDDEGHGTHTATTAAGNFVNGANVFGQADGTAVGIAPLAHLAIYKVCDFDG-CSESRVYAAMDTAID------DGVDV 271 (742)
Q Consensus 199 ~~~d~~gHGThVAGiiaG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~------~g~~V 271 (742)
...|..||||||||||+|... +. .+.||||+|+|+.+|+++..+ ++.+++++||+||++ ++++|
T Consensus 79 ~~~d~~gHGT~VAgiia~~~~--------~~-g~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~~~~~~V 149 (327)
T 2x8j_A 79 NFSDNNGHGTHVAGTVAAAET--------GS-GVVGVAPKADLFIIKALSGDGSGEMGWIAKAIRYAVDWRGPKGEQMRI 149 (327)
T ss_dssp CCCCSSSHHHHHHHHHHCCCC--------SS-BCCCSSTTCEEEEEECSCTTSEECHHHHHHHHHHHHHCCCTTSCCCSE
T ss_pred CCCCCCCchHHHHHHHhccCC--------CC-CcEeeCCCCEEEEEEeECCCCCcCHHHHHHHHHHHHhhcccccCCceE
Confidence 357899999999999998731 11 247999999999999998877 778899999999999 89999
Q ss_pred EEEccCCCCCCCCCCHHHHHHHHhhcCCcEEEEecCCCCCCC-----CCCCCCCCceEEecccCCcceeEEEEEeCCCee
Q 048043 272 LSLSLGAASVPFFEDPLAIGSFSAIQKEIFVSCSAGNEGPNP-----STSSNEAPWILSVGASTTDRSIVASVELGNQAV 346 (742)
Q Consensus 272 In~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~-----~~~~~~~p~vitVga~~~~~~~~~~~~~~~g~~ 346 (742)
||||||... ....+..++.++.++|++||+||||+|... ..+|+..+++|+|||++
T Consensus 150 in~S~G~~~---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~~Pa~~~~vi~Vga~~---------------- 210 (327)
T 2x8j_A 150 ITMSLGGPT---DSEELHDAVKYAVSNNVSVVCAAGNEGDGREDTNEFAYPAAYNEVIAVGAVD---------------- 210 (327)
T ss_dssp EEECEEBSC---CCHHHHHHHHHHHHTTCEEEEECCCT---------TCBTTTSTTSEEEEEEC----------------
T ss_pred EEECCCcCC---CCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCceeccccCCCEEEEEEEC----------------
Confidence 999999863 245777888889999999999999999752 45677889999999842
Q ss_pred EeeeeccCCCCCCCCceeEEecCCCCCCCCCCcCCCCCCCCccceEEEeecCCcchhhhhHHHhhcCCeEEEEeccCCCC
Q 048043 347 YDGEALFQPKDFPSKQFPLIYPGANGNVSSAQCSPGSLSSNIRGKLVLCERGGGERTKKGQVVKDAGGIGMILMNDKLNG 426 (742)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~g~~~~i~~~~~~~~ 426 (742)
T Consensus 211 -------------------------------------------------------------------------------- 210 (327)
T 2x8j_A 211 -------------------------------------------------------------------------------- 210 (327)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCCccccEEEEehhhHHHHHHHHhcCCCCeEEEEeceeEecccCCCccccccCCCCCCCCCCCcccceEecCCcEE
Q 048043 427 YSTLADPHLLPAVHVSYAAGESIKAYINSTSSPNATIVFKGTVIGKKSTPELASFSSRGPSIASPGILKPDIIGPGVNIL 506 (742)
Q Consensus 427 ~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~ 506 (742)
..+.++.||++||. |||+|||++|+
T Consensus 211 -----------------------------------------------~~~~~~~fS~~G~~--------~di~APG~~i~ 235 (327)
T 2x8j_A 211 -----------------------------------------------FDLRLSDFTNTNEE--------IDIVAPGVGIK 235 (327)
T ss_dssp -----------------------------------------------TTCCBSCC---CCC--------CSEEEECSSEE
T ss_pred -----------------------------------------------CCCCCCCccCCCCC--------ceEecCcCceE
Confidence 12367899999985 49999999999
Q ss_pred eccCCCccCCCCCcccceeeccccchhHHHHHHHHHHHhh-----CCCCCHHHHHHHHHcccccccCCCCccccCCCCCC
Q 048043 507 AAWPFSVENKTNTKSTFNMVAGTSMSCPHLSGVAALLKSA-----HPDWSPAAIKSAIMTTADIVSLDGKPIVDQRLLPA 581 (742)
Q Consensus 507 sa~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~-----~p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~ 581 (742)
++++. +.|..++|||||||||||++|||+|+ +|.+++.+||++|++||+++. .
T Consensus 236 s~~~~---------~~~~~~sGTS~AaP~VaG~aAll~~~~~~~~~p~ls~~~v~~~L~~tA~~~g-------------~ 293 (327)
T 2x8j_A 236 STYLD---------SGYAELSGTAMAAPHVAGALALIINLAEDAFKRSLSETEIYAQLVRRATPIG-------------F 293 (327)
T ss_dssp EECST---------TCEEEEESGGGTHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHTTEECCS-------------S
T ss_pred eecCC---------CCEEeecCHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHHHHHHHhCccCC-------------C
Confidence 99887 78999999999999999999999999 999999999999999999763 2
Q ss_pred CCCcccccccCcCCcCCC
Q 048043 582 DMFAVGAGHVNPSSANDP 599 (742)
Q Consensus 582 ~~~~~G~G~vd~~~Al~~ 599 (742)
++..+|+|+||+.+|++.
T Consensus 294 ~~~~~G~G~vd~~~A~~~ 311 (327)
T 2x8j_A 294 TAQAEGNGFLTLDLVERI 311 (327)
T ss_dssp CHHHHTTCEECTTHHHHH
T ss_pred CCCceeeeEECHHHHHHh
Confidence 456899999999999873
No 17
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=100.00 E-value=1.4e-50 Score=431.54 Aligned_cols=285 Identities=27% Similarity=0.403 Sum_probs=228.1
Q ss_pred ccCccC--CCCCccCCCCCCccEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCccccCccccceeecCCCCC--CC
Q 048043 123 FLGLHQ--NSGFWKDSNLGKGVIIGVMDTGITPGHPSFSDEGMPPPPAKWKGKCEFKGAACNNKLIGARNFLQGST--GE 198 (742)
Q Consensus 123 ~~g~~~--~~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~n~ki~~~~~~~~~~~--~~ 198 (742)
.|+++. +..+|..+++|+||+|||||||||++||+|.++ +...++|..... ..
T Consensus 7 ~W~l~~i~~~~~w~~~~~G~gv~VaViDtGvd~~H~~l~~~-----------------------~~~~~~~~~~~~~~~~ 63 (310)
T 2ixt_A 7 PWGIKAIYNNDTLTSTTGGSGINIAVLDTGVNTSHPDLVNN-----------------------VEQCKDFTGATTPINN 63 (310)
T ss_dssp CHHHHHHHTCTTCCCCCCCTTCEEEEEESCCCTTCTTTTTT-----------------------EEEEEESSSSSSCEET
T ss_pred CCchhhcCchhhhhccCCCCCcEEEEEecCCCCCCHHHhhc-----------------------ccccccccCCCCCCCC
Confidence 355544 577999999999999999999999999999853 223344543311 12
Q ss_pred CCCCCCCCchhhhhhhcccccCCCcccccCCcceeeecCcceEEEEEEeccCC-CCHHHHHHHHHHhhhCCC-----cEE
Q 048043 199 PPLDDEGHGTHTATTAAGNFVNGANVFGQADGTAVGIAPLAHLAIYKVCDFDG-CSESRVYAAMDTAIDDGV-----DVL 272 (742)
Q Consensus 199 ~~~d~~gHGThVAGiiaG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g~-----~VI 272 (742)
...|..||||||||||+|.... ....+.||||+|+|+.+|++.+.+ ++.++++++|+|++++++ +||
T Consensus 64 ~~~d~~gHGT~vAgiia~~~~~-------n~~g~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~~~~~~Vi 136 (310)
T 2ixt_A 64 SCTDRNGHGTHVAGTALADGGS-------DQAGIYGVAPDADLWAYKVLLDSGSGYSDDIAAAIRHAADQATATGTKTII 136 (310)
T ss_dssp CCCCSSSHHHHHHHHHHCBCCT-------TSCSCBCSCTTSEEEEEECSCTTSCCCHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CCCCCCCCHHHHHHHHhccCCC-------CCCceEEECCCCEEEEEEEEcCCCCCcHHHHHHHHHHHHHhhhccCCCeEE
Confidence 3568899999999999987421 122347999999999999998776 688899999999999988 999
Q ss_pred EEccCCCCCCCCCCHHHHHHHHhhcCCcEEEEecCCCCCC--CCCCCCCCCceEEecccCCcceeEEEEEeCCCeeEeee
Q 048043 273 SLSLGAASVPFFEDPLAIGSFSAIQKEIFVSCSAGNEGPN--PSTSSNEAPWILSVGASTTDRSIVASVELGNQAVYDGE 350 (742)
Q Consensus 273 n~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~--~~~~~~~~p~vitVga~~~~~~~~~~~~~~~g~~~~~~ 350 (742)
|||||... ....+..++.++.++|+++|+||||+|.. ...+++..+++|+||+.....
T Consensus 137 n~S~G~~~---~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~~~Pa~~~~vi~Vga~~~~~----------------- 196 (310)
T 2ixt_A 137 SMSLGSSA---NNSLISSAVNYAYSKGVLIVAAAGNSGYSQGTIGYPGALPNAIAVAALENVQ----------------- 196 (310)
T ss_dssp EECCCBSS---CCHHHHHHHHHHHHTTCEEEEECCSCCSSTTCCCBTTTSTTSEEEEEEEEEE-----------------
T ss_pred EEcCCCCC---CCHHHHHHHHHHHhCCcEEEEcCCCCCCCCCCCCCcccCCCeeEEEeccccc-----------------
Confidence 99999874 24567778888999999999999999976 355678889999999842100
Q ss_pred eccCCCCCCCCceeEEecCCCCCCCCCCcCCCCCCCCccceEEEeecCCcchhhhhHHHhhcCCeEEEEeccCCCCcccc
Q 048043 351 ALFQPKDFPSKQFPLIYPGANGNVSSAQCSPGSLSSNIRGKLVLCERGGGERTKKGQVVKDAGGIGMILMNDKLNGYSTL 430 (742)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~ 430 (742)
T Consensus 197 -------------------------------------------------------------------------------- 196 (310)
T 2ixt_A 197 -------------------------------------------------------------------------------- 196 (310)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccccEEEEehhhHHHHHHHHhcCCCCeEEEEeceeEecccCCC--ccccccCCCCCCCC----CCCcccceEecCCc
Q 048043 431 ADPHLLPAVHVSYAAGESIKAYINSTSSPNATIVFKGTVIGKKSTP--ELASFSSRGPSIAS----PGILKPDIIGPGVN 504 (742)
Q Consensus 431 ~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~a~fSs~Gp~~~~----~~~~KPDI~APG~~ 504 (742)
..+ .++.||++||.... .++.||||+|||.+
T Consensus 197 -------------------------------------------~~g~~~~~~~S~~G~~~~~g~~~~~~~~~di~ApG~~ 233 (310)
T 2ixt_A 197 -------------------------------------------QNGTYRVADYSSRGYISTAGDYVIQEGDIEISAPGSS 233 (310)
T ss_dssp -------------------------------------------ETTEEEECTTSCCCCTTTTTSSSCCTTCCCEEEECSS
T ss_pred -------------------------------------------cCCCeeeccccCCCCccCCccccccCCCeeEECCCCC
Confidence 011 57889999995321 13459999999999
Q ss_pred EEeccCCCccCCCCCcccceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHcccccccCCCCccccCCCCCCCCC
Q 048043 505 ILAAWPFSVENKTNTKSTFNMVAGTSMSCPHLSGVAALLKSAHPDWSPAAIKSAIMTTADIVSLDGKPIVDQRLLPADMF 584 (742)
Q Consensus 505 I~sa~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~ 584 (742)
|+++++. +.|..++|||||||||||++|||+|++|+|++.+||++|++||++++..+. ....+.++.
T Consensus 234 i~s~~~~---------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~~~----~~a~~g~d~ 300 (310)
T 2ixt_A 234 VYSTWYN---------GGYNTISGTSMATPHVSGLAAKIWAENPSLSNTQLRSNLQERAKSVDIKGG----YGAAIGDDY 300 (310)
T ss_dssp EEEECTT---------SSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHTSCCCBS----TTCCSSSBT
T ss_pred EeeecCC---------CCEEeeccHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccCCCCC----cccccCCcc
Confidence 9999887 789999999999999999999999999999999999999999998764331 112456778
Q ss_pred cccccccCc
Q 048043 585 AVGAGHVNP 593 (742)
Q Consensus 585 ~~G~G~vd~ 593 (742)
.+|||++|+
T Consensus 301 ~~G~G~~~v 309 (310)
T 2ixt_A 301 ASGFGFARV 309 (310)
T ss_dssp TTBTCBCCC
T ss_pred ccccceeec
Confidence 999999986
No 18
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=100.00 E-value=1e-51 Score=434.09 Aligned_cols=264 Identities=24% Similarity=0.310 Sum_probs=212.0
Q ss_pred CCCC-CccEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCccccCccccceeecCCCCCCCCCCCCCCCchhhhhhh
Q 048043 136 SNLG-KGVIIGVMDTGITPGHPSFSDEGMPPPPAKWKGKCEFKGAACNNKLIGARNFLQGSTGEPPLDDEGHGTHTATTA 214 (742)
Q Consensus 136 ~~~G-~gV~VaVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~n~ki~~~~~~~~~~~~~~~~d~~gHGThVAGii 214 (742)
.++| +||+|||||||||++||+|.++. +..+++..........|.+||||||||||
T Consensus 3 ~l~G~~gV~VaViDtGid~~Hpdl~g~~-----------------------~~~~~~~~~~~~~~d~~~~gHGT~VAGii 59 (282)
T 3zxy_A 3 SLKGDHNIRVAILDGPVDIAHPCFQGAD-----------------------LTVLPTLAPTAARSDGFMSAHGTHVASII 59 (282)
T ss_dssp TCCCCTTSEEEEEESCCCTTSGGGTTCE-----------------------EEECCCSSCCCCCTTCHHHHHHHHHHHHH
T ss_pred CCcCCCCCEEEEEcCCCCCCChhHCCCe-----------------------eecCcCCCCCCCCCCCCCCCcccceeehh
Confidence 3678 69999999999999999998541 11122222211123334678999999999
Q ss_pred cccccCCCcccccCCcceeeecCcceEEEEEEeccCC--CCHHHHHHHHHHhhhCCCcEEEEccCCCCC-CCCCCHHHHH
Q 048043 215 AGNFVNGANVFGQADGTAVGIAPLAHLAIYKVCDFDG--CSESRVYAAMDTAIDDGVDVLSLSLGAASV-PFFEDPLAIG 291 (742)
Q Consensus 215 aG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g--~~~~~i~~ai~~a~~~g~~VIn~SlG~~~~-~~~~~~~~~a 291 (742)
+|+... .+.||||+|+|+.+|++.+++ .+..+++++|+||++++++|||||||.... ......+..+
T Consensus 60 ag~~~~----------~~~GvAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~~~~Vin~S~G~~~~~~~~~~~~~~a 129 (282)
T 3zxy_A 60 FGQPET----------SVPGIAPQCRGLIVPIFSDDRRRITQLDLARGIERAVNAGAHIINISGGELTDFGEADGWLENA 129 (282)
T ss_dssp HCCTTS----------SSCCSSTTSEEEEEECSCSSSSCCCHHHHHHHHHHHHHTTCSEEEECCCEEESSSCCCHHHHHH
T ss_pred hccCCc----------eeeeeccccceEeeEeeccccccchHHHHHHHHHHhhccCCeEEeccCccccccccccHHHHHH
Confidence 987421 247999999999999986543 677889999999999999999999997542 2334567778
Q ss_pred HHHhhcCCcEEEEecCCCCCCCCCCCCCCCceEEecccCCcceeEEEEEeCCCeeEeeeeccCCCCCCCCceeEEecCCC
Q 048043 292 SFSAIQKEIFVSCSAGNEGPNPSTSSNEAPWILSVGASTTDRSIVASVELGNQAVYDGEALFQPKDFPSKQFPLIYPGAN 371 (742)
Q Consensus 292 ~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (742)
+..+.++|+++|+||||+|.....++...+++|+|||..
T Consensus 130 i~~a~~~gi~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~----------------------------------------- 168 (282)
T 3zxy_A 130 VSLCRQNNVLLVAAAGNNGCDCLHVPAALPAVLAVGAMD----------------------------------------- 168 (282)
T ss_dssp HHHHHHTTCEEEEECCSSCSSCEEETTTSTTCEEEEEEC-----------------------------------------
T ss_pred HHHHhhcCceEEEecccCCCccccCccccceeEEEEEEc-----------------------------------------
Confidence 888999999999999999998888888899999999842
Q ss_pred CCCCCCCcCCCCCCCCccceEEEeecCCcchhhhhHHHhhcCCeEEEEeccCCCCccccCCCccccEEEEehhhHHHHHH
Q 048043 372 GNVSSAQCSPGSLSSNIRGKLVLCERGGGERTKKGQVVKDAGGIGMILMNDKLNGYSTLADPHLLPAVHVSYAAGESIKA 451 (742)
Q Consensus 372 ~~~~~~~c~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~ 451 (742)
T Consensus 169 -------------------------------------------------------------------------------- 168 (282)
T 3zxy_A 169 -------------------------------------------------------------------------------- 168 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhcCCCCeEEEEeceeEecccCCCccccccCCCCCCCCCCCcccceEecCCcEEeccCCCccCCCCCcccceeeccccc
Q 048043 452 YINSTSSPNATIVFKGTVIGKKSTPELASFSSRGPSIASPGILKPDIIGPGVNILAAWPFSVENKTNTKSTFNMVAGTSM 531 (742)
Q Consensus 452 ~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~y~~~sGTSm 531 (742)
..+.++.||+||+. ..||||+|||.+|+++++. +.|..++||||
T Consensus 169 ----------------------~~~~~~~~S~~~~~-----~~~~di~ApG~~i~s~~~~---------~~~~~~sGTS~ 212 (282)
T 3zxy_A 169 ----------------------DHGHPLDFSNWGST-----YEQQGILAPGEDILGAKPG---------GGTERLSGTAF 212 (282)
T ss_dssp ----------------------TTSCBCSSSCCCHH-----HHHHEEEEECSSEEEECTT---------SCEEEECSHHH
T ss_pred ----------------------CCCccccccCCCCC-----ccccceeccCcceeeecCC---------CceeecCCCcc
Confidence 12367889999875 4689999999999999988 78999999999
Q ss_pred hhHHHHHHHHHHHhhC----CCCCHHHHHHHHHcccccccCCCCccccCCCCCCCCCcccccccCcCCcCC
Q 048043 532 SCPHLSGVAALLKSAH----PDWSPAAIKSAIMTTADIVSLDGKPIVDQRLLPADMFAVGAGHVNPSSAND 598 (742)
Q Consensus 532 AaP~VAG~aALl~q~~----p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vd~~~Al~ 598 (742)
|||||||++|||++++ |.++|++||++|++||++++.. .+.....+|+|+||+.+|++
T Consensus 213 AaP~vaG~aAll~~~~~~~~~~~~~~~vk~~L~~tA~~~~~~---------~~~~~~~~G~G~ln~~~A~~ 274 (282)
T 3zxy_A 213 ATPIVSGVAALLLSEQVRRGETPDPQKVRQLLLQSALPCDDD---------APEQARRCLAGRLNVSGAFT 274 (282)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHCBCC----------------CGGGTTCBCCHHHHHH
T ss_pred cchHHHHHHHHHHHHhHhhCCCCCHHHHHHHHHhhCeeCCCC---------CCCccCceeeeEeCHHHHHH
Confidence 9999999999999874 7899999999999999977432 23455689999999999986
No 19
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=100.00 E-value=1e-49 Score=474.61 Aligned_cols=407 Identities=20% Similarity=0.230 Sum_probs=273.0
Q ss_pred ccEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCccccCccccceeecCCCCC-CCCCCCCCCCchhhhhhhccccc
Q 048043 141 GVIIGVMDTGITPGHPSFSDEGMPPPPAKWKGKCEFKGAACNNKLIGARNFLQGST-GEPPLDDEGHGTHTATTAAGNFV 219 (742)
Q Consensus 141 gV~VaVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~n~ki~~~~~~~~~~~-~~~~~d~~gHGThVAGiiaG~~~ 219 (742)
+|+|||||||+|.+|++...- ..|+...+.+ .| .+.+....++.++.+ .....|++||||||||||||..
T Consensus 214 ~V~VAVIDTG~d~DL~d~~~l------~~Y~~~~dyg-~F-~D~v~~~~n~~Ddgd~~~~v~D~~GHGThVAGIIAa~~- 284 (1354)
T 3lxu_X 214 DGWLTIVDTTEQGDLDQALRI------GEYSRTHETR-NV-DDFLSISVNVHDEGNVLEVVGMSSPHGTHVSSIASGNH- 284 (1354)
T ss_dssp SSCEEEECSSSSCCSSCSEEE------ECTTTTCCCC-EE-SSSCEEEEEEEGGGTEEEEEECCCHHHHHHHHHHCCCC-
T ss_pred CEEEEEEeCCCCCCccccccc------cccccccccc-cc-ccccCCCCccCCCCCccccCCCCCCcHHHHHHHHhcCC-
Confidence 699999999998776655310 0111111111 00 112222333332211 0122478999999999999984
Q ss_pred CCCcccccCCcceeeecCcceEEEEEEeccCC---CCHHHHHHHHHHhhh-----CCCcEEEEccCCCCCCCCCCHHHHH
Q 048043 220 NGANVFGQADGTAVGIAPLAHLAIYKVCDFDG---CSESRVYAAMDTAID-----DGVDVLSLSLGAASVPFFEDPLAIG 291 (742)
Q Consensus 220 ~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g---~~~~~i~~ai~~a~~-----~g~~VIn~SlG~~~~~~~~~~~~~a 291 (742)
+ ...+.||||+|+|+.+|+++..+ .+..+++.+|.+|++ +|++|||||||........+.+..+
T Consensus 285 N--------~~g~~GVAP~AkI~~vKVld~~~g~~~t~s~l~~AI~~Aid~a~~~~gadVINmS~G~~~~~~~~~~l~~a 356 (1354)
T 3lxu_X 285 S--------SRDVDGVAPNAKIVSMTIGDGRLGSMETGTALVRAMTKVMELCRDGRRIDVINMSYGEHANWSNSGRIGEL 356 (1354)
T ss_dssp S--------SSSSCCSCTTCEEEEEECBCTTTSSCBCHHHHHHHHHHHHHHHHTTCCCCEEEECCCCCCSCSSCCHHHHH
T ss_pred C--------CCCceeecCCCEEEEEEeccCCCCcccChHHHHHHHHHHHHHHhhcCCceEEEcCCccCCCCCccHHHHHH
Confidence 2 12247999999999999997653 255678888888777 7999999999998644445677778
Q ss_pred HHHhh-cCCcEEEEecCCCCCCCCC--CCC--CCCceEEecccCCcceeEEEEEeCCCeeEeeeeccCCCCCCCCceeEE
Q 048043 292 SFSAI-QKEIFVSCSAGNEGPNPST--SSN--EAPWILSVGASTTDRSIVASVELGNQAVYDGEALFQPKDFPSKQFPLI 366 (742)
Q Consensus 292 ~~~a~-~~Gi~vV~AAGN~g~~~~~--~~~--~~p~vitVga~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 366 (742)
+.++. ++|++||+||||+|.+... +++ ..+++|+|||+.........
T Consensus 357 I~~A~~~~GVlVVaAAGN~G~~~~ti~~PA~~ss~~VItVGAtd~~~~~~a~---------------------------- 408 (1354)
T 3lxu_X 357 MNEVVNKYGVVWVASAGNHGPALCTVGTPPDISQPSLIGVGAYVSPQMMEAE---------------------------- 408 (1354)
T ss_dssp HHHHHHTSCCEEEEECCSCCSSSSCCCTTTCSSSSCEEEEEEECCTTCCCC-----------------------------
T ss_pred HHHHHHhCCcEEEEeCCCCCCCCCccCCcccccCCceEEEEeecCCCCcccc----------------------------
Confidence 87876 8999999999999986543 455 48999999996432210000
Q ss_pred ecCCCCCCCCCCcCCCCCCCCccceEEEeecCCcchhhhhHHHhhcCCeEEEEeccCCCCccccCCCccccEEEEehhhH
Q 048043 367 YPGANGNVSSAQCSPGSLSSNIRGKLVLCERGGGERTKKGQVVKDAGGIGMILMNDKLNGYSTLADPHLLPAVHVSYAAG 446 (742)
Q Consensus 367 ~~~~~~~~~~~~c~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g 446 (742)
|.
T Consensus 409 ys------------------------------------------------------------------------------ 410 (1354)
T 3lxu_X 409 YA------------------------------------------------------------------------------ 410 (1354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cc------------------------------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHhcCCCCeEEEEeceeEecccCCCccccccCCCCCCCCCCCcccceEecCCcEEeccCCCccCCCCCcccceee
Q 048043 447 ESIKAYINSTSSPNATIVFKGTVIGKKSTPELASFSSRGPSIASPGILKPDIIGPGVNILAAWPFSVENKTNTKSTFNMV 526 (742)
Q Consensus 447 ~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~y~~~ 526 (742)
......+.+++|||+||+. ++++||||+|||++|.++..... +.|..+
T Consensus 411 -----------------------~~~~~~g~~asFSS~GPt~--dg~~KpDIaAPG~~I~St~~~~~-------~~y~~~ 458 (1354)
T 3lxu_X 411 -----------------------MREKLPGNVYTWTSRDPCI--DGGQGVTVCAPGGAIASVPQFTM-------SKSQLM 458 (1354)
T ss_dssp ------------------------------CCCCCCCCSCCS--SSSCCEEEEEEC----------------------CC
T ss_pred -----------------------cccCCCCccccccCCCCCc--cCCCcceEEecCceEEEeecCCC-------CceecC
Confidence 0001124789999999998 68999999999999999865422 689999
Q ss_pred ccccchhHHHHHHHHHHHh----hCCCCCHHHHHHHHHcccccccCCCCccccCCCCCCCCCcccccccCcCCcCCCCcc
Q 048043 527 AGTSMSCPHLSGVAALLKS----AHPDWSPAAIKSAIMTTADIVSLDGKPIVDQRLLPADMFAVGAGHVNPSSANDPGLI 602 (742)
Q Consensus 527 sGTSmAaP~VAG~aALl~q----~~p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vd~~~Al~~~lv 602 (742)
+|||||||||||++|||++ .+|+|++.+||++|++||+++.. .+++.||||+||+.+|++..+.
T Consensus 459 SGTSmAAP~VAGvAALLLSalkq~~P~LTp~qVk~lL~~TA~~~~~------------~~~~~~G~GlLDa~~AV~~a~~ 526 (1354)
T 3lxu_X 459 NGTSMAAPHVAGAVALLISGLKQQNIEYSPYSIKRAISVTATKLGY------------VDPFAQGHGLLNVEKAFEHLTE 526 (1354)
T ss_dssp CCGGGCHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSBCCTT------------SCTTTSSSSBCCHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHHhCccCCC------------CCcccccCCEeCHHHHHHHHHh
Confidence 9999999999999999986 89999999999999999998743 2456899999999999999999
Q ss_pred ccCCCCCcccccccCCCC-ccceeEEEeeeeeccCCCCCCcccCCCCceeeeeCCccEEEEEEEEeeC-------C-CCc
Q 048043 603 YDIQPDDYIPYLCGLNYS-DQHVQDIVMINVQCSKVSGIAETELNYPSFSVILGSTSQTYNRTVTNVG-------Q-AES 673 (742)
Q Consensus 603 ~~~~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ln~ps~~~~~~~~~~~~~~tv~n~~-------~-~~~ 673 (742)
++..+.+++.|.|..+.. ...|..- . . .. ....+++++|+.+- . ...
T Consensus 527 ~~~~p~~~v~f~~~v~~~~~rgIylR--~-----------~-~~----------~~~~~~tv~V~p~f~~~~~~~~~~~i 582 (1354)
T 3lxu_X 527 HRQSKDNMLRFSVRVGNNADKGIHLR--Q-----------G-VQ----------RNSIDYNVYIEPIFYNDKEADPKDKF 582 (1354)
T ss_dssp TTTCGGGGEEEEEEETTTTBSSEEEC--S-----------S-CC----------CSCEEEEEEEEEEESSCSCSSSTTCS
T ss_pred cCCCCccceEEEEEecCCCCCceEEe--c-----------c-cc----------CCceEEEEEEeeeecCcccCChhhcc
Confidence 999999999999988753 3333221 0 0 00 11234444443322 1 122
Q ss_pred eEEEEEEC-CCCcEEEEEcCeeEecCCCcEEEEEEEEEEccCCCCceEEEEEEEEc-----CceEEEEeEEEEeC
Q 048043 674 SYTHKIVA-PEGVTVTVEPENISFTKKNQKAIYSITFTRSQKTSALFAQGYLSWVS-----TKHTVRSPIAVRFQ 742 (742)
Q Consensus 674 ~y~~~~~~-p~~~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~G~i~~~~-----~~~~v~~p~~v~~~ 742 (742)
.|.+.+.. +...-|. .|..|.+ .++.++|.|++++...+. +.++++|...| .+..+|+||.|..+
T Consensus 583 ~f~~~l~L~~t~~wv~-~p~~l~l--~~~~r~~~v~vDp~~L~~-G~h~~~v~~~D~~~~~~gp~f~ipvTv~~P 653 (1354)
T 3lxu_X 583 NFNVRLNLIASQPWVQ-CGAFLDL--SYGTRSIAVRVDPTGLQP-GVHSAVIRAYDTDCVQKGSLFEIPVTVVQP 653 (1354)
T ss_dssp CCCCEEEEEESSTTEE-ECSCEEC--TTSCEEEEEEECGGGCCS-EEEEEEEEEEESSCTTSCCSEEEEEEEEEC
T ss_pred ceEEEEEEecCCCcee-cccceee--cCCCceEEEEECCCCCCC-cceeEEEEEEEcCCcccCceEEeeEEEEee
Confidence 23222221 1112333 4888877 478899999999998766 89999998764 57999999999754
No 20
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Probab=100.00 E-value=8.9e-51 Score=434.21 Aligned_cols=268 Identities=29% Similarity=0.429 Sum_probs=221.2
Q ss_pred ccCccC--CCCCccCCCCCC--ccEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCccccCccccceeecCCCCC--
Q 048043 123 FLGLHQ--NSGFWKDSNLGK--GVIIGVMDTGITPGHPSFSDEGMPPPPAKWKGKCEFKGAACNNKLIGARNFLQGST-- 196 (742)
Q Consensus 123 ~~g~~~--~~~~~~~~~~G~--gV~VaVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~n~ki~~~~~~~~~~~-- 196 (742)
.|++.. ++.+|+.+ +|+ ||+|||||||||++||+|.++ +...++|..+..
T Consensus 9 ~W~l~~i~~~~aw~~~-~G~~~gv~VaViDtGid~~Hp~l~~~-----------------------~~~~~~~~~~~~~~ 64 (320)
T 2z30_A 9 PWGIERVKAPSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAAN-----------------------IAWCVSTLRGKVST 64 (320)
T ss_dssp CHHHHHTTCGGGTTTC-CSCCTTCEEEEEESCBCTTCTTTGGG-----------------------EEEEEECGGGCCBC
T ss_pred CCChhhcChHHHHHhc-CCCcCCeEEEEECCCCCCCChhHhcc-----------------------cccCccccCCccCC
Confidence 355543 56799988 999 999999999999999999742 222233332210
Q ss_pred -CCCCCCCCCCchhhhhhhcccccCCCcccccCCcceeeecCcceEEEEEEeccCC-CCHHHHHHHHHHhhhC-------
Q 048043 197 -GEPPLDDEGHGTHTATTAAGNFVNGANVFGQADGTAVGIAPLAHLAIYKVCDFDG-CSESRVYAAMDTAIDD------- 267 (742)
Q Consensus 197 -~~~~~d~~gHGThVAGiiaG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~------- 267 (742)
.....|..||||||||||+|... .. .+.||||+|+|+.+|+++..| ++.++++++|+||+++
T Consensus 65 ~~~~~~d~~gHGT~vAgiia~~~n--------~~-g~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai~~a~~~~~~~~~~ 135 (320)
T 2z30_A 65 KLRDCADQNGHGTHVIGTIAALNN--------DI-GVVGVAPGVQIYSVRVLDARGSGSYSDIAIGIEQAILGPDGVADK 135 (320)
T ss_dssp CHHHHBCSSSHHHHHHHHHHCCSS--------SB-SCCCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHTTTTCSCT
T ss_pred CCCCCCCCCCCHHHHHHHHHcccC--------CC-ceEeeCCCCEEEEEEeeCCCCCccHHHHHHHHHHHHhCccccccc
Confidence 01236789999999999998621 11 247999999999999998877 7788999999999987
Q ss_pred -------------CCcEEEEccCCCCCCCCCCHHHHHHHHhhcCCcEEEEecCCCCCCCCCCCCCCCceEEecccCCcce
Q 048043 268 -------------GVDVLSLSLGAASVPFFEDPLAIGSFSAIQKEIFVSCSAGNEGPNPSTSSNEAPWILSVGASTTDRS 334 (742)
Q Consensus 268 -------------g~~VIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVga~~~~~~ 334 (742)
+++|||||||... ....+..++.++.++|+++|+||||+|.....+++..|++|+|||..
T Consensus 136 ~~~~~~~~~~~~~~~~Vin~S~G~~~---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~---- 208 (320)
T 2z30_A 136 DGDGIIAGDPDDDAAEVISMSLGGPA---DDSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPEVIAVGAID---- 208 (320)
T ss_dssp TSSSCCTTCTTSCCCSEEEECEEBSC---CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEEC----
T ss_pred ccccccccccccCCceEEEecCCCCC---CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEeeC----
Confidence 9999999999874 24567778888999999999999999988888889999999999842
Q ss_pred eEEEEEeCCCeeEeeeeccCCCCCCCCceeEEecCCCCCCCCCCcCCCCCCCCccceEEEeecCCcchhhhhHHHhhcCC
Q 048043 335 IVASVELGNQAVYDGEALFQPKDFPSKQFPLIYPGANGNVSSAQCSPGSLSSNIRGKLVLCERGGGERTKKGQVVKDAGG 414 (742)
Q Consensus 335 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~g~ 414 (742)
T Consensus 209 -------------------------------------------------------------------------------- 208 (320)
T 2z30_A 209 -------------------------------------------------------------------------------- 208 (320)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEEEeccCCCCccccCCCccccEEEEehhhHHHHHHHHhcCCCCeEEEEeceeEecccCCCccccccCCCCCCCCCCCc
Q 048043 415 IGMILMNDKLNGYSTLADPHLLPAVHVSYAAGESIKAYINSTSSPNATIVFKGTVIGKKSTPELASFSSRGPSIASPGIL 494 (742)
Q Consensus 415 ~~~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~ 494 (742)
..+.+++||++||
T Consensus 209 -----------------------------------------------------------~~~~~~~~S~~g~-------- 221 (320)
T 2z30_A 209 -----------------------------------------------------------SNDNIASFSNRQP-------- 221 (320)
T ss_dssp -----------------------------------------------------------TTSCBCTTSCSSC--------
T ss_pred -----------------------------------------------------------CCCCcCcccCCCC--------
Confidence 1236789999986
Q ss_pred ccceEecCCcEEeccCCCccCCCCCcccceeeccccchhHHHHHHHHHHHhhC-------------CCCCHHHHHHHHHc
Q 048043 495 KPDIIGPGVNILAAWPFSVENKTNTKSTFNMVAGTSMSCPHLSGVAALLKSAH-------------PDWSPAAIKSAIMT 561 (742)
Q Consensus 495 KPDI~APG~~I~sa~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~-------------p~~s~~~ik~~L~~ 561 (742)
+|+|||.+|+++++. +.|..++|||||||||||++|||+|++ |++++.+||++|++
T Consensus 222 --~v~APG~~i~s~~~~---------~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~~~p~lt~~~v~~~L~~ 290 (320)
T 2z30_A 222 --EVSAPGVDILSTYPD---------DSYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHI 290 (320)
T ss_dssp --SEEEECSSEEEEETT---------TEEEEECSHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCTTCCSTTSHHHHHHH
T ss_pred --CEEeCCCCeEEeccC---------CCeEeccCHHHHHHHHHHHHHHHHHhchhhcccccccccCCCCCHHHHHHHHHh
Confidence 789999999999987 789999999999999999999999999 99999999999999
Q ss_pred ccccccCCCCccccCCCCCCCCCcccccccCcCCcCCC
Q 048043 562 TADIVSLDGKPIVDQRLLPADMFAVGAGHVNPSSANDP 599 (742)
Q Consensus 562 TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vd~~~Al~~ 599 (742)
||+++... ..+..||||+||+.+|++.
T Consensus 291 ta~~~~~~-----------g~~~~~G~G~vd~~~A~~~ 317 (320)
T 2z30_A 291 TADDLGPT-----------GWDADYGYGVVRAALAVQA 317 (320)
T ss_dssp HSBCCSSS-----------SSBTTTBTCBCCHHHHHHH
T ss_pred hCccCCCC-----------CCCCCcCCceeCHHHHHHH
Confidence 99987432 3456799999999999863
No 21
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=100.00 E-value=1.6e-50 Score=437.69 Aligned_cols=274 Identities=19% Similarity=0.144 Sum_probs=220.6
Q ss_pred ccCccC--CCCCccCCCCCC--ccEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCccccCccccceeecCCCCC--
Q 048043 123 FLGLHQ--NSGFWKDSNLGK--GVIIGVMDTGITPGHPSFSDEGMPPPPAKWKGKCEFKGAACNNKLIGARNFLQGST-- 196 (742)
Q Consensus 123 ~~g~~~--~~~~~~~~~~G~--gV~VaVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~n~ki~~~~~~~~~~~-- 196 (742)
.|++.. +..+|+. ++|+ ||+||||||||| +||+|.++ +...++|..+.+
T Consensus 24 ~W~l~~i~~~~aw~~-~~G~~~gv~VaViDsGid-~Hp~l~~~-----------------------~~~~~~~~~~~~~~ 78 (347)
T 2iy9_A 24 PWYFDAIGLTETTMS-LTDKNTPVVVSVVDSGVA-FIGGLSDS-----------------------EFAKFSFTQDGSPF 78 (347)
T ss_dssp CHHHHHHTCCHHHHH-TSCTTSCCEEEEEESCCC-CCGGGTTC-----------------------EEEEEECBTTCCSS
T ss_pred CcchhhCChHHHHHH-hcCCCCCCEEEEEcCCCc-CChhhhcC-----------------------cccCCcccCCCCCC
Confidence 344433 5678988 8999 999999999999 99999753 233344543321
Q ss_pred -CCCCCCCCCCchhhhhhhcccccCCCcccccCCcceeeecCcceEEEEEEeccCCCCHHHHHHHHHHhhhC------CC
Q 048043 197 -GEPPLDDEGHGTHTATTAAGNFVNGANVFGQADGTAVGIAPLAHLAIYKVCDFDGCSESRVYAAMDTAIDD------GV 269 (742)
Q Consensus 197 -~~~~~d~~gHGThVAGiiaG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~~------g~ 269 (742)
.....|..||||||||||+|+. | +.||||+|+|+.+|++++.+.. ++++||+||+++ ++
T Consensus 79 ~~~~~~d~~gHGT~vAgiia~~~-------g-----~~GvAp~a~l~~~~v~~~~~~~--~~~~ai~~a~~~~~~~~~~~ 144 (347)
T 2iy9_A 79 PVKKSEALYIHGTAMASLIASRY-------G-----IYGVYPHALISSRRVIPDGVQD--SWIRAIESIMSNVFLAPGEE 144 (347)
T ss_dssp CCSSSHHHHHHHHHHHHHHHCSS-------S-----SCCSSTTCEEEEEECCSSBCTT--HHHHHHHHHHTCTTSCTTEE
T ss_pred CCCCCCCCCCcHHHHHHHHhccc-------C-----CcccCCCCEEEEEEEecCCCHH--HHHHHHHHHHhhhhcccCCc
Confidence 1245678899999999999861 1 3799999999999999775533 999999999999 99
Q ss_pred cEEEEccCCCCCCCCCCHHHHHHHHhhcCCcEEEEecCCCCCC-------CCCCCCCCC----------ceEEecccCC-
Q 048043 270 DVLSLSLGAASVPFFEDPLAIGSFSAIQKEIFVSCSAGNEGPN-------PSTSSNEAP----------WILSVGASTT- 331 (742)
Q Consensus 270 ~VIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~-------~~~~~~~~p----------~vitVga~~~- 331 (742)
+|||||||..........+..++..+.++|+++|+||||+|.. ...+++..+ ++|+|||...
T Consensus 145 ~Vin~S~G~~~~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~~~~~~Pa~~~~~~~~~~~~~~vi~Vga~~~~ 224 (347)
T 2iy9_A 145 KIINISGGQKGVASASVWTELLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPVSSVNKKQDPVIRVAALAQY 224 (347)
T ss_dssp EEEEESSCBCCC-CCHHHHHHHHHHHHHTSCEEEEECCBSCCBTTTSCTTTSCBTTTCCCCSHHHHHTCCEEEEEEECCC
T ss_pred eEEEeccccCCCCCcCHHHHHHHHHHHhCCeEEEEeCCCCCCCCCCcccccccCCCcCccccccccccCCEEEEEEcccC
Confidence 9999999986544455678888889999999999999999985 345677788 9999998532
Q ss_pred -cceeEEEEEeCCCeeEeeeeccCCCCCCCCceeEEecCCCCCCCCCCcCCCCCCCCccceEEEeecCCcchhhhhHHHh
Q 048043 332 -DRSIVASVELGNQAVYDGEALFQPKDFPSKQFPLIYPGANGNVSSAQCSPGSLSSNIRGKLVLCERGGGERTKKGQVVK 410 (742)
Q Consensus 332 -~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~ 410 (742)
+...
T Consensus 225 ~~g~~--------------------------------------------------------------------------- 229 (347)
T 2iy9_A 225 RKGET--------------------------------------------------------------------------- 229 (347)
T ss_dssp CTTSC---------------------------------------------------------------------------
T ss_pred CCCce---------------------------------------------------------------------------
Confidence 1000
Q ss_pred hcCCeEEEEeccCCCCccccCCCccccEEEEehhhHHHHHHHHhcCCCCeEEEEeceeEecccCCCccccccCCCCCCCC
Q 048043 411 DAGGIGMILMNDKLNGYSTLADPHLLPAVHVSYAAGESIKAYINSTSSPNATIVFKGTVIGKKSTPELASFSSRGPSIAS 490 (742)
Q Consensus 411 ~~g~~~~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~ 490 (742)
....+.+++||++||+
T Consensus 230 -------------------------------------------------------------~~~~~~~~~fS~~G~~--- 245 (347)
T 2iy9_A 230 -------------------------------------------------------------PVLHGGGITGSRFGNN--- 245 (347)
T ss_dssp -------------------------------------------------------------CCBCCCSSSCBCBCTT---
T ss_pred -------------------------------------------------------------ecccCCCCCCCCCCCC---
Confidence 0001245799999985
Q ss_pred CCCcccceEecCCcEEeccCCCccCCCCCcccceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHcccccccCCC
Q 048043 491 PGILKPDIIGPGVNILAAWPFSVENKTNTKSTFNMVAGTSMSCPHLSGVAALLKSAHPDWSPAAIKSAIMTTADIVSLDG 570 (742)
Q Consensus 491 ~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~g 570 (742)
||||+|||++|+++++. +.|..++|||||||||||++|||+|++|+|++.+||++|++||+++...+
T Consensus 246 ----~~di~APG~~i~s~~~~---------~~~~~~sGTS~AaP~VaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~~ 312 (347)
T 2iy9_A 246 ----WVDIAAPGQNITFLRPD---------AKTGTGSGTSEATAIVSGVLAAMTSCNPRATATELKRTLLESADKYPSLV 312 (347)
T ss_dssp ----TCSEEEECSSEEEECTT---------SCEEEECSHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSEECGGGT
T ss_pred ----CCEEEeCCCCeEeecCC---------CCeEeccchHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCCCC
Confidence 67999999999999987 78999999999999999999999999999999999999999999875432
Q ss_pred CccccCCCCCCCCCcccccccCcCCcCCC
Q 048043 571 KPIVDQRLLPADMFAVGAGHVNPSSANDP 599 (742)
Q Consensus 571 ~~~~~~~~~~~~~~~~G~G~vd~~~Al~~ 599 (742)
+..+|+|+||+.+|++.
T Consensus 313 ------------~~~~G~G~ld~~~A~~~ 329 (347)
T 2iy9_A 313 ------------DKVTEGRVLNAEKAISM 329 (347)
T ss_dssp ------------TTSGGGEECCHHHHHHH
T ss_pred ------------CccccCCEecHHHHHHH
Confidence 25899999999999984
No 22
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596}
Probab=100.00 E-value=1.2e-50 Score=431.43 Aligned_cols=270 Identities=24% Similarity=0.346 Sum_probs=218.1
Q ss_pred CCCccCCCCCCccEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCccccCccccceeecCCCCCCCCCCCCCCCchh
Q 048043 130 SGFWKDSNLGKGVIIGVMDTGITPGHPSFSDEGMPPPPAKWKGKCEFKGAACNNKLIGARNFLQGSTGEPPLDDEGHGTH 209 (742)
Q Consensus 130 ~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~n~ki~~~~~~~~~~~~~~~~d~~gHGTh 209 (742)
+++|+.+..++||+|||||||||++||+|.++. +....++..+. .....|..|||||
T Consensus 11 ~~aW~~~~G~~gV~VaViDtGid~~Hpdl~g~~----------------------~~~~~~~~~~~-~~~~~d~~gHGTh 67 (306)
T 4h6w_A 11 KKLWSETRGDPKICVAVLDGIVDQNHPCFIGAD----------------------LTRLPSLVSGE-ANANGSMSTHGTH 67 (306)
T ss_dssp HHHHHHCSCCTTCEEEEESSCCCTTSGGGTTCE----------------------EEECC-----------CCCCHHHHH
T ss_pred HHHHhhhCCCCCCEEEEEcCCCCCCChhHcCCc----------------------ccCCCcccCCC-CCCCCCCCCchHH
Confidence 359999877799999999999999999998541 11112222221 1234577899999
Q ss_pred hhhhhcccccCCCcccccCCcceeeecCcceEEEEEEeccCC--CCHHHHHHHHHHhhhCCCcEEEEccCCCC-CCCCCC
Q 048043 210 TATTAAGNFVNGANVFGQADGTAVGIAPLAHLAIYKVCDFDG--CSESRVYAAMDTAIDDGVDVLSLSLGAAS-VPFFED 286 (742)
Q Consensus 210 VAGiiaG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g--~~~~~i~~ai~~a~~~g~~VIn~SlG~~~-~~~~~~ 286 (742)
|||||+|+.. +.+.||||+|+|+.+|++.+.+ ....++++||+||++++++|||+|||... ......
T Consensus 68 VAGiiag~~~----------~~~~GVAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~g~~vi~~s~g~~~~~~~~~~ 137 (306)
T 4h6w_A 68 VASIIFGQHD----------SPVTGIAPQCRGLIVPVFADESLKLSQLDLSRAIEQAVNNGANIINVSAGQLTDAGEADT 137 (306)
T ss_dssp HHHHHHCCTT----------SSSCCSSTTSEEEECCCCCSSSCCCCHHHHHHHHHHHHHTTCSEEEECCCEEESSSCCCH
T ss_pred HHHHHHcccc----------CCcceeccccccceeeccccccccchHHHHHHHHHHhhcccceeeeccccccccCCCccH
Confidence 9999998731 1247999999999999987643 67788999999999999999999999753 234445
Q ss_pred HHHHHHHHhhcCCcEEEEecCCCCCCCCCCCCCCCceEEecccCCcceeEEEEEeCCCeeEeeeeccCCCCCCCCceeEE
Q 048043 287 PLAIGSFSAIQKEIFVSCSAGNEGPNPSTSSNEAPWILSVGASTTDRSIVASVELGNQAVYDGEALFQPKDFPSKQFPLI 366 (742)
Q Consensus 287 ~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 366 (742)
.+..++..+.++|+++|+||||+|.....+++..+++|+||+..
T Consensus 138 ~~~~ai~~a~~~gi~vvaaagn~g~~~~~~Pa~~~~vi~Vga~~------------------------------------ 181 (306)
T 4h6w_A 138 WLEKAIQLCQENNVLLIAATGNDGCECLHVPASLPTVLAVGAMD------------------------------------ 181 (306)
T ss_dssp HHHHHHHHHHHTTCEEEEECCSSSSBCEEETTTSTTCEEEEEEC------------------------------------
T ss_pred HHHHHHHHHHHcCCeEEEecCCCCcccccccccCCcceEEEEec------------------------------------
Confidence 67788889999999999999999988888888899999999842
Q ss_pred ecCCCCCCCCCCcCCCCCCCCccceEEEeecCCcchhhhhHHHhhcCCeEEEEeccCCCCccccCCCccccEEEEehhhH
Q 048043 367 YPGANGNVSSAQCSPGSLSSNIRGKLVLCERGGGERTKKGQVVKDAGGIGMILMNDKLNGYSTLADPHLLPAVHVSYAAG 446 (742)
Q Consensus 367 ~~~~~~~~~~~~c~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g 446 (742)
T Consensus 182 -------------------------------------------------------------------------------- 181 (306)
T 4h6w_A 182 -------------------------------------------------------------------------------- 181 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhcCCCCeEEEEeceeEecccCCCccccccCCCCCCCCCCCcccceEecCCcEEeccCCCccCCCCCcccceee
Q 048043 447 ESIKAYINSTSSPNATIVFKGTVIGKKSTPELASFSSRGPSIASPGILKPDIIGPGVNILAAWPFSVENKTNTKSTFNMV 526 (742)
Q Consensus 447 ~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~y~~~ 526 (742)
..+.+++||++|+. ..||||+|||++|+++++. +.|..+
T Consensus 182 ---------------------------~~~~~~~~s~~g~~-----~~~~di~APG~~i~s~~~~---------~~~~~~ 220 (306)
T 4h6w_A 182 ---------------------------DQGKPVDFSNWGDA-----YQKQGILAPGKDILGAKPN---------GGTIRL 220 (306)
T ss_dssp ---------------------------TTSCBCSSSCBCHH-----HHHHEEEEECSSEEEECTT---------SCEEEE
T ss_pred ---------------------------CCCCccccccccCC-----cCcceeecCCcCcccccCC---------Cceecc
Confidence 12367789999975 4689999999999999987 789999
Q ss_pred ccccchhHHHHHHHHHHHh----hCCCCCHHHHHHHHHcccccccCCCCccccCCCCCCCCCcccccccCcCCcCC
Q 048043 527 AGTSMSCPHLSGVAALLKS----AHPDWSPAAIKSAIMTTADIVSLDGKPIVDQRLLPADMFAVGAGHVNPSSAND 598 (742)
Q Consensus 527 sGTSmAaP~VAG~aALl~q----~~p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vd~~~Al~ 598 (742)
+|||||||||||++|||++ ++|.++|+|||++|++||+++...+ ......||+|+||+.+|++
T Consensus 221 sGTS~AaP~VaG~~All~s~~~~~~p~~t~~~v~~~L~~tA~~~~~~~---------~~~~~~~G~G~ln~~~Av~ 287 (306)
T 4h6w_A 221 SGTSFATPIVSGVAALLLSLQIKRGEKPDPQKVKNALLASATPCNPKD---------TDDQSRCLMGKLNILDAIE 287 (306)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCCTTT---------CSCGGGGTTCBCCHHHHHH
T ss_pred CCCcchhHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHhhCccCCCCC---------CCCCCCcceeecCHHHHHH
Confidence 9999999999999999986 4699999999999999999875433 2334579999999999987
No 23
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=100.00 E-value=1.3e-48 Score=409.49 Aligned_cols=235 Identities=29% Similarity=0.445 Sum_probs=203.9
Q ss_pred CCCccCCCCCCccEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCccccCccccceeecCCCCCCCCCCCCCCCchh
Q 048043 130 SGFWKDSNLGKGVIIGVMDTGITPGHPSFSDEGMPPPPAKWKGKCEFKGAACNNKLIGARNFLQGSTGEPPLDDEGHGTH 209 (742)
Q Consensus 130 ~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~n~ki~~~~~~~~~~~~~~~~d~~gHGTh 209 (742)
..+|..+++|+||+|||||||||++||+|.++ +...++|.+.. ..+.|..|||||
T Consensus 19 ~~aw~~~~~G~gv~VaViDtGvd~~h~~l~~~-----------------------~~~~~~~~~~~--~~~~d~~gHGT~ 73 (284)
T 1sh7_A 19 DRNYNANFDGFGVTAYVIDTGVNNNHEEFGGR-----------------------SVSGYDFVDND--ADSSDCNGHGTH 73 (284)
T ss_dssp CSBCCCSCCCTTCEEEEEESCCCTTCTTTTTC-----------------------EEEEEETTTTB--SCCCCSSSHHHH
T ss_pred hhhhhcCCCCCCCEEEEEcCCCCCCChhHcCC-----------------------ccccccccCCC--CCCCCCCCcHHH
Confidence 45899999999999999999999999999753 33345666542 356789999999
Q ss_pred hhhhhcccccCCCcccccCCcceeeecCcceEEEEEEeccCC-CCHHHHHHHHHHhhhC--CCcEEEEccCCCCCCCCCC
Q 048043 210 TATTAAGNFVNGANVFGQADGTAVGIAPLAHLAIYKVCDFDG-CSESRVYAAMDTAIDD--GVDVLSLSLGAASVPFFED 286 (742)
Q Consensus 210 VAGiiaG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~--g~~VIn~SlG~~~~~~~~~ 286 (742)
|||||+|.. .||||+|+|+.+|++++.+ ++.+++++||+|++++ +++|||||||... ..
T Consensus 74 vAgiia~~~--------------~GvAp~a~l~~~kv~~~~g~~~~~~~~~ai~~a~~~~~~~~Vin~S~G~~~----~~ 135 (284)
T 1sh7_A 74 VAGTIGGSQ--------------YGVAKNVNIVGVRVLSCSGSGTTSGVISGVDWVAQNASGPSVANMSLGGGQ----ST 135 (284)
T ss_dssp HHHHHHCTT--------------TCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHHHCCSSEEEEECCCBSC----CH
T ss_pred HHHHHhccc--------------CCcCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhCCCCCcEEEeCCCCCC----CH
Confidence 999999862 5999999999999998876 7888999999999984 7999999999872 45
Q ss_pred HHHHHHHHhhcCCcEEEEecCCCCCCCC-CCCCCCCceEEecccCCcceeEEEEEeCCCeeEeeeeccCCCCCCCCceeE
Q 048043 287 PLAIGSFSAIQKEIFVSCSAGNEGPNPS-TSSNEAPWILSVGASTTDRSIVASVELGNQAVYDGEALFQPKDFPSKQFPL 365 (742)
Q Consensus 287 ~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~p~vitVga~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 365 (742)
.+..++.++.++|+++|+||||+|.... .+++..+++|+||+..
T Consensus 136 ~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~----------------------------------- 180 (284)
T 1sh7_A 136 ALDSAVQGAIQSGVSFMLAAGNSNADACNTSPARVPSGVTVGSTT----------------------------------- 180 (284)
T ss_dssp HHHHHHHHHHHTTCEEEEECCSSSSBGGGSBTTTCTTSEEEEEEC-----------------------------------
T ss_pred HHHHHHHHHHHCCCEEEEECCcCCCCCCccccccCCCeEEEEEec-----------------------------------
Confidence 7778888899999999999999997653 4577889999999842
Q ss_pred EecCCCCCCCCCCcCCCCCCCCccceEEEeecCCcchhhhhHHHhhcCCeEEEEeccCCCCccccCCCccccEEEEehhh
Q 048043 366 IYPGANGNVSSAQCSPGSLSSNIRGKLVLCERGGGERTKKGQVVKDAGGIGMILMNDKLNGYSTLADPHLLPAVHVSYAA 445 (742)
Q Consensus 366 ~~~~~~~~~~~~~c~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~p~~~i~~~~ 445 (742)
T Consensus 181 -------------------------------------------------------------------------------- 180 (284)
T 1sh7_A 181 -------------------------------------------------------------------------------- 180 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHhcCCCCeEEEEeceeEecccCCCccccccCCCCCCCCCCCcccceEecCCcEEeccCCCccCCCCCccccee
Q 048043 446 GESIKAYINSTSSPNATIVFKGTVIGKKSTPELASFSSRGPSIASPGILKPDIIGPGVNILAAWPFSVENKTNTKSTFNM 525 (742)
Q Consensus 446 g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~y~~ 525 (742)
..+.+++||++||.. ||+|||++|+++++. +.|..
T Consensus 181 ----------------------------~~~~~~~~S~~G~~~--------di~ApG~~i~s~~~~---------~~~~~ 215 (284)
T 1sh7_A 181 ----------------------------SSDSRSSFSNWGSCV--------DLFAPGSQIKSAWYD---------GGYKT 215 (284)
T ss_dssp ----------------------------TTSBBCTTCCBSTTC--------CEEEECSSEEEECTT---------SSEEE
T ss_pred ----------------------------CCCCcCcccCCCCcc--------EEEeccCCeEEecCC---------CCEEE
Confidence 123678999999975 999999999999887 68999
Q ss_pred eccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHccccccc
Q 048043 526 VAGTSMSCPHLSGVAALLKSAHPDWSPAAIKSAIMTTADIVS 567 (742)
Q Consensus 526 ~sGTSmAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~ 567 (742)
++|||||||||||++|||+|++|+++++|||++|++||++..
T Consensus 216 ~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 257 (284)
T 1sh7_A 216 ISGTSMATPHVAGVAALYLQENNGLTPLQLTGLLNSRASENK 257 (284)
T ss_dssp ECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESC
T ss_pred ccChHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCC
Confidence 999999999999999999999999999999999999999764
No 24
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=100.00 E-value=7.2e-49 Score=437.22 Aligned_cols=288 Identities=28% Similarity=0.367 Sum_probs=225.7
Q ss_pred CCCcc-CCCCCCccEEEEEcccCCC------CCCCCCCCCCCCCCCccccccccCccccCccccceeecCCCCCCCCCCC
Q 048043 130 SGFWK-DSNLGKGVIIGVMDTGITP------GHPSFSDEGMPPPPAKWKGKCEFKGAACNNKLIGARNFLQGSTGEPPLD 202 (742)
Q Consensus 130 ~~~~~-~~~~G~gV~VaVIDtGid~------~Hp~f~~~g~~~~~~~~~g~~~~g~~f~n~ki~~~~~~~~~~~~~~~~d 202 (742)
+.+|+ .+++|+||+|||||||||+ .||+|.++ +...++|.+. ..+.|
T Consensus 11 ~~~~~~~g~~G~gv~VaViDtGvd~~~~~~~~hp~l~~~-----------------------i~~~~~~~~~---~~~~d 64 (434)
T 1wmd_A 11 DVAQSSYGLYGQGQIVAVADTGLDTGRNDSSMHEAFRGK-----------------------ITALYALGRT---NNAND 64 (434)
T ss_dssp HHHHHHHCCSCTTCEEEEEESCCTTSCSSTTSCTTTTTC-----------------------EEEEEETTTT---TCCCC
T ss_pred hhhhhccCCCCcccEEEEEecCcCCCCCCcccCcccCCC-----------------------EeeeccccCC---CCCCC
Confidence 34887 7999999999999999999 79999743 3344556543 35678
Q ss_pred CCCCchhhhhhhcccccCCCcccccCCcceeeecCcceEEEEEEeccCCC---CHHHHHHHHHHhhhCCCcEEEEccCCC
Q 048043 203 DEGHGTHTATTAAGNFVNGANVFGQADGTAVGIAPLAHLAIYKVCDFDGC---SESRVYAAMDTAIDDGVDVLSLSLGAA 279 (742)
Q Consensus 203 ~~gHGThVAGiiaG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g~---~~~~i~~ai~~a~~~g~~VIn~SlG~~ 279 (742)
..||||||||||+|+.. .+.||||+|+|+.+|+++..|. ..+++.++|+|++++|++|||||||..
T Consensus 65 ~~gHGT~VAgiiag~g~-----------~~~GvAp~a~l~~~~v~~~~g~~~~~~~~~~~ai~~a~~~g~~Vin~S~G~~ 133 (434)
T 1wmd_A 65 TNGHGTHVAGSVLGNGS-----------TNKGMAPQANLVFQSIMDSGGGLGGLPSNLQTLFSQAYSAGARIHTNSWGAA 133 (434)
T ss_dssp SSSHHHHHHHHHHCCSS-----------SSCCSSTTSEEEEEECCCTTSSCTTSCSSHHHHHHHHHHTTCSEEEECCCBC
T ss_pred CCCcHHHHHHHHHcCCC-----------CceeeCCCCEEEEEEeecCCCccccccHHHHHHHHHHHhcCCeEEEecCCCC
Confidence 99999999999998631 1479999999999999987663 456799999999999999999999987
Q ss_pred CCCCCCCHHHHHHHHh-hcCCcEEEEecCCCCCCC--CCCCCCCCceEEecccCCcceeEEEEEeCCCeeEeeeeccCCC
Q 048043 280 SVPFFEDPLAIGSFSA-IQKEIFVSCSAGNEGPNP--STSSNEAPWILSVGASTTDRSIVASVELGNQAVYDGEALFQPK 356 (742)
Q Consensus 280 ~~~~~~~~~~~a~~~a-~~~Gi~vV~AAGN~g~~~--~~~~~~~p~vitVga~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 356 (742)
....+ +....++.++ .++|+++|+||||+|... ...++..+++|+|||++..+...
T Consensus 134 ~~~~~-~~~~~~id~~~~~~gvlvV~AAGN~g~~~~~~~~Pa~~~~vitVga~~~~~~~~-------------------- 192 (434)
T 1wmd_A 134 VNGAY-TTDSRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVGATENLRPSF-------------------- 192 (434)
T ss_dssp CTTCC-CHHHHHHHHHHHHSSCEEEEECCSCTTSSSCCCBSTTCSSSEEEEEECCSCGGG--------------------
T ss_pred cCCcC-CHHHHHHHHHHhCCCeEEEEECCCCCCCCcccCCcccCCccEEEecccccCccc--------------------
Confidence 52222 3455555555 589999999999999764 45678899999999964321100
Q ss_pred CCCCCceeEEecCCCCCCCCCCcCCCCCCCCccceEEEeecCCcchhhhhHHHhhcCCeEEEEeccCCCCccccCCCccc
Q 048043 357 DFPSKQFPLIYPGANGNVSSAQCSPGSLSSNIRGKLVLCERGGGERTKKGQVVKDAGGIGMILMNDKLNGYSTLADPHLL 436 (742)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~ 436 (742)
+.
T Consensus 193 ---------------------------------------------------------------------~~--------- 194 (434)
T 1wmd_A 193 ---------------------------------------------------------------------GS--------- 194 (434)
T ss_dssp ---------------------------------------------------------------------CG---------
T ss_pred ---------------------------------------------------------------------Cc---------
Confidence 00
Q ss_pred cEEEEehhhHHHHHHHHhcCCCCeEEEEeceeEecccCCCccccccCCCCCCCCCCCcccceEecCCcEEeccCCCccC-
Q 048043 437 PAVHVSYAAGESIKAYINSTSSPNATIVFKGTVIGKKSTPELASFSSRGPSIASPGILKPDIIGPGVNILAAWPFSVEN- 515 (742)
Q Consensus 437 p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~- 515 (742)
.....+.+++|||+||+. ++++||||+|||++|+++++.....
T Consensus 195 ----------------------------------~~~~~~~~a~fS~~G~~~--~g~~kpdi~ApG~~i~s~~~~~~~~~ 238 (434)
T 1wmd_A 195 ----------------------------------YADNINHVAQFSSRGPTK--DGRIKPDVMAPGTFILSARSSLAPDS 238 (434)
T ss_dssp ----------------------------------GGSCTTSBCTTSCCCCCT--TSCCCCCEEEECSSEEEECCTTCCGG
T ss_pred ----------------------------------ccCCCCccccccCCCCCC--CCCCCceEEcCCCCeEecCCCCCCCc
Confidence 011235789999999998 7899999999999999998642100
Q ss_pred --CCCCcccceeeccccchhHHHHHHHHHHHhhCCCC-----CHHHHHHHHHcccccccCCCCccccCCCCCCCCCcccc
Q 048043 516 --KTNTKSTFNMVAGTSMSCPHLSGVAALLKSAHPDW-----SPAAIKSAIMTTADIVSLDGKPIVDQRLLPADMFAVGA 588 (742)
Q Consensus 516 --~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~-----s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~ 588 (742)
.....+.|..++|||||||||||++|||+|++|++ ++++||++|++||+++.. ..++..|||
T Consensus 239 ~~~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~s~~~vk~~L~~tA~~~~~-----------~~~~~~~G~ 307 (434)
T 1wmd_A 239 SFWANHDSKYAYMGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALIAGAADIGL-----------GYPNGNQGW 307 (434)
T ss_dssp GSSEEEETTEEEECSHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHCBCCSS-----------CSSCTTTTT
T ss_pred ccccCCCCceEeecchhHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHcCCcccCC-----------CCCCccCCc
Confidence 00013689999999999999999999999999875 899999999999987521 346778999
Q ss_pred cccCcCCcCCCC
Q 048043 589 GHVNPSSANDPG 600 (742)
Q Consensus 589 G~vd~~~Al~~~ 600 (742)
|+||+.+|++..
T Consensus 308 G~vd~~~a~~~~ 319 (434)
T 1wmd_A 308 GRVTLDKSLNVA 319 (434)
T ss_dssp CBCCHHHHHTCE
T ss_pred CeEeHHHhcccc
Confidence 999999999754
No 25
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Probab=100.00 E-value=2e-49 Score=428.29 Aligned_cols=291 Identities=27% Similarity=0.318 Sum_probs=219.2
Q ss_pred CCCCccCCCCCCccEEEEEcccCCCCCCCCCCCCCCCCCCcccccccc-----CccccCccccceeecCC-----CC-CC
Q 048043 129 NSGFWKDSNLGKGVIIGVMDTGITPGHPSFSDEGMPPPPAKWKGKCEF-----KGAACNNKLIGARNFLQ-----GS-TG 197 (742)
Q Consensus 129 ~~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~-----g~~f~n~ki~~~~~~~~-----~~-~~ 197 (742)
+..+|+.+++|+||+||||||||+ +||+|.++-.. .|+-.... +.+..........++.. .. ..
T Consensus 21 ~~~aw~~g~~G~gV~VaViDtGi~-~hp~l~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (340)
T 3lpc_A 21 ADKVWDMGFTGQNVVVAVVDTGIL-HHRDLNANVLP----GYDFISNSQISLDGDGRDADPFDEGDWFDNWACGGRPDPR 95 (340)
T ss_dssp HHHHHHHTCSCTTCEEEEEESCBC-CCTTTGGGBCC----CEECCCCHHHHCSSSSSBSCCBCCCCCBCTTTTSCTTCGG
T ss_pred HHHHHHhcCCCCCeEEEEEcCCCC-CChhhhccccc----CccccCCccccccCCCccCCccccccccccccccCCCCcc
Confidence 456999999999999999999998 99999854211 11100000 00000000000000000 00 01
Q ss_pred CCCCCCCCCchhhhhhhcccccCCCcccccCCcceeeecCcceEEEEEEeccCCCCHHHHHHHHHHhhh----------C
Q 048043 198 EPPLDDEGHGTHTATTAAGNFVNGANVFGQADGTAVGIAPLAHLAIYKVCDFDGCSESRVYAAMDTAID----------D 267 (742)
Q Consensus 198 ~~~~d~~gHGThVAGiiaG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~----------~ 267 (742)
....|..||||||||||+|...+. . .+.||||+|+|+.+|++...+...++++++|+|+++ +
T Consensus 96 ~~~~d~~gHGT~vAgiia~~~~~~-------~-g~~GvAp~a~l~~~~v~~~~~~~~~~~~~ai~~a~~~~~~~~~~~~~ 167 (340)
T 3lpc_A 96 KERSDSSWHGSHVAGTIAAVTNNR-------I-GVAGVAYGAKVVPVRALGRCGGYDSDISDGLYWAAGGRIAGIPENRN 167 (340)
T ss_dssp GSCBCCCCHHHHHHHHHHCCCSSS-------S-SCCCTTTTSEEEEEECCBTTBCCHHHHHHHHHHHHTCCCTTSCCCSS
T ss_pred cCCCCCCCCHHHHHHHHHccCCCC-------C-cceeecCCCEEEEEEEecCCCCcHHHHHHHHHHHhcccccccccccC
Confidence 235678999999999999974321 1 247999999999999998877888999999999998 8
Q ss_pred CCcEEEEccCCCCCCCCCCHHHHHHHHhhcCCcEEEEecCCCCCCCC-CCCCCCCceEEecccCCcceeEEEEEeCCCee
Q 048043 268 GVDVLSLSLGAASVPFFEDPLAIGSFSAIQKEIFVSCSAGNEGPNPS-TSSNEAPWILSVGASTTDRSIVASVELGNQAV 346 (742)
Q Consensus 268 g~~VIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~p~vitVga~~~~~~~~~~~~~~~g~~ 346 (742)
+++|||||||... .....+..++.++.++|++||+||||+|.... .+++..+++|+||+.+
T Consensus 168 ~~~Vin~S~G~~~--~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~---------------- 229 (340)
T 3lpc_A 168 PAKVINMSLGSDG--QCSYNAQTMIDRATRLGALVVVAAGNENQNASNTWPTSCNNVLSVGATT---------------- 229 (340)
T ss_dssp CCSEEEECCCEES--CCCHHHHHHHHHHHHHTCEEEEECCSSSSBGGGEETTTSSSCEEEEEEC----------------
T ss_pred CCeEEEeCcCCCC--CcchhHHHHHHHHHhCCcEEEEeCCCCCCCCCCcCCccCCceEEEecCC----------------
Confidence 9999999999753 23456777778889999999999999997754 4577889999999842
Q ss_pred EeeeeccCCCCCCCCceeEEecCCCCCCCCCCcCCCCCCCCccceEEEeecCCcchhhhhHHHhhcCCeEEEEeccCCCC
Q 048043 347 YDGEALFQPKDFPSKQFPLIYPGANGNVSSAQCSPGSLSSNIRGKLVLCERGGGERTKKGQVVKDAGGIGMILMNDKLNG 426 (742)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~g~~~~i~~~~~~~~ 426 (742)
T Consensus 230 -------------------------------------------------------------------------------- 229 (340)
T 3lpc_A 230 -------------------------------------------------------------------------------- 229 (340)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCCccccEEEEehhhHHHHHHHHhcCCCCeEEEEeceeEecccCCCccccccCCCCCCCCCCCcccceEecCCcEE
Q 048043 427 YSTLADPHLLPAVHVSYAAGESIKAYINSTSSPNATIVFKGTVIGKKSTPELASFSSRGPSIASPGILKPDIIGPGVNIL 506 (742)
Q Consensus 427 ~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~ 506 (742)
..+.++.||++||. |||+|||.+|+
T Consensus 230 -----------------------------------------------~~~~~~~~S~~g~~--------~di~ApG~~i~ 254 (340)
T 3lpc_A 230 -----------------------------------------------SRGIRASFSNYGVD--------VDLAAPGQDIL 254 (340)
T ss_dssp -----------------------------------------------TTSSBCTTCCBSTT--------CCEEEECSSEE
T ss_pred -----------------------------------------------CCCCcCCCCCCCCC--------ceEEecCCCee
Confidence 12367899999974 59999999999
Q ss_pred eccCCCccCCCCCcccceeeccccchhHHHHHHHHHHHhh-C---CCCCHHHHHHHHHcccccccCCCCccccCCCCCCC
Q 048043 507 AAWPFSVENKTNTKSTFNMVAGTSMSCPHLSGVAALLKSA-H---PDWSPAAIKSAIMTTADIVSLDGKPIVDQRLLPAD 582 (742)
Q Consensus 507 sa~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~-~---p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~ 582 (742)
++++.... ......|..++|||||||||||++|||+|+ + |.+++++||++|++||+++.. .+
T Consensus 255 s~~~~~~~--~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~p~lt~~~v~~~L~~tA~~~~~------------~~ 320 (340)
T 3lpc_A 255 STVDSGTR--RPVSDAYSFMAGTSMATPHVSGVAALVISAANSVNKNLTPAELKDVLVSTTSPFNG------------RL 320 (340)
T ss_dssp EEEESCSS--SCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCSS------------CC
T ss_pred cccCCCCc--CCCCCcceecccHhHHHHHHHHHHHHHHHhhhhhCCCCCHHHHHHHHHhcCCcCCC------------CC
Confidence 99876331 112246999999999999999999999998 5 999999999999999998742 24
Q ss_pred CCcccccccCcCCcCCC
Q 048043 583 MFAVGAGHVNPSSANDP 599 (742)
Q Consensus 583 ~~~~G~G~vd~~~Al~~ 599 (742)
+..||+|+||+.+||+.
T Consensus 321 ~~~~G~G~vd~~~Av~~ 337 (340)
T 3lpc_A 321 DRALGSGIVDAEAAVNS 337 (340)
T ss_dssp SSCCCSSBCCHHHHHHH
T ss_pred CCCcccceecHHHHHHH
Confidence 56899999999999874
No 26
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=100.00 E-value=4.7e-48 Score=404.62 Aligned_cols=237 Identities=31% Similarity=0.449 Sum_probs=202.8
Q ss_pred CCCccCCCCCCccEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCccccCccccceeecCCCCCCCCCCCCCCCchh
Q 048043 130 SGFWKDSNLGKGVIIGVMDTGITPGHPSFSDEGMPPPPAKWKGKCEFKGAACNNKLIGARNFLQGSTGEPPLDDEGHGTH 209 (742)
Q Consensus 130 ~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~n~ki~~~~~~~~~~~~~~~~d~~gHGTh 209 (742)
..+|..+++|+||+|||||||||++||+|.++ +...++|.++. .++.|..|||||
T Consensus 21 ~~~~~~~~~G~gv~VaViDtGid~~Hpdl~~~-----------------------~~~~~d~~~~~--~~~~d~~gHGT~ 75 (278)
T 2b6n_A 21 DNNYHTDYDGSGVTAFVIDTGVLNTHNEFGGR-----------------------ASSGYDFIDND--YDATDCNGHGTH 75 (278)
T ss_dssp CSEEECSCCCTTCEEEEEESCCCTTCGGGTTC-----------------------EEEEEETTTTB--SCCCCSSSHHHH
T ss_pred chhcccCCCCCCCEEEEEeCCCCCCChhHhcc-----------------------cccCeecCCCC--CCCCCCCCcHHH
Confidence 45799999999999999999999999999753 23345665542 356789999999
Q ss_pred hhhhhcccccCCCcccccCCcceeeecCcceEEEEEEeccCC-CCHHHHHHHHHHhhh--CCCcEEEEccCCCCCCCCCC
Q 048043 210 TATTAAGNFVNGANVFGQADGTAVGIAPLAHLAIYKVCDFDG-CSESRVYAAMDTAID--DGVDVLSLSLGAASVPFFED 286 (742)
Q Consensus 210 VAGiiaG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~--~g~~VIn~SlG~~~~~~~~~ 286 (742)
|||||+|.. .||||+|+|+.+|++++.+ ++.++++++|+|+++ .+++|||||||... ..
T Consensus 76 vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~~~g~~Vin~S~G~~~----~~ 137 (278)
T 2b6n_A 76 VAGTIGGST--------------YGVAKNVNVVGVRVLNCSGSGSNSGVIAGINWVKNNASGPAVANMSLGGGA----SQ 137 (278)
T ss_dssp HHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHCCSSEEEEECCCEEC----CH
T ss_pred HHHHHHCCC--------------cCCCCCCeEEEEEEECCCCCccHHHHHHHHHHHHhCCCCCeEEEECCCCCc----CH
Confidence 999999862 5999999999999998876 788899999999997 59999999999864 35
Q ss_pred HHHHHHHHhhcCCcEEEEecCCCCCCCC-CCCCCCCceEEecccCCcceeEEEEEeCCCeeEeeeeccCCCCCCCCceeE
Q 048043 287 PLAIGSFSAIQKEIFVSCSAGNEGPNPS-TSSNEAPWILSVGASTTDRSIVASVELGNQAVYDGEALFQPKDFPSKQFPL 365 (742)
Q Consensus 287 ~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~p~vitVga~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 365 (742)
.+..++.++.++|+++|+||||+|.... .++...+++|+||+..
T Consensus 138 ~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~----------------------------------- 182 (278)
T 2b6n_A 138 ATDDAVNAAVAAGITFVVAAGNDNSNACNYSPARAADAITVGSTT----------------------------------- 182 (278)
T ss_dssp HHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEEC-----------------------------------
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCCCCCCCcCcccCCCeEEEEeeC-----------------------------------
Confidence 6777888899999999999999997654 3477889999999842
Q ss_pred EecCCCCCCCCCCcCCCCCCCCccceEEEeecCCcchhhhhHHHhhcCCeEEEEeccCCCCccccCCCccccEEEEehhh
Q 048043 366 IYPGANGNVSSAQCSPGSLSSNIRGKLVLCERGGGERTKKGQVVKDAGGIGMILMNDKLNGYSTLADPHLLPAVHVSYAA 445 (742)
Q Consensus 366 ~~~~~~~~~~~~~c~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~p~~~i~~~~ 445 (742)
T Consensus 183 -------------------------------------------------------------------------------- 182 (278)
T 2b6n_A 183 -------------------------------------------------------------------------------- 182 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHhcCCCCeEEEEeceeEecccCCCccccccCCCCCCCCCCCcccceEecCCcEEeccCCCccCCCCCccccee
Q 048043 446 GESIKAYINSTSSPNATIVFKGTVIGKKSTPELASFSSRGPSIASPGILKPDIIGPGVNILAAWPFSVENKTNTKSTFNM 525 (742)
Q Consensus 446 g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~y~~ 525 (742)
..+.+++||++||.. ||+|||++|+++++... +.|..
T Consensus 183 ----------------------------~~~~~~~~S~~G~~~--------di~ApG~~i~s~~~~~~-------~~~~~ 219 (278)
T 2b6n_A 183 ----------------------------SNDSRSSFSNYGTCL--------DIYAPGSSITSSWYTSN-------SATNT 219 (278)
T ss_dssp ----------------------------TTSBBCTTCCBSTTC--------CEEEECSSEEEECTTST-------TCEEE
T ss_pred ----------------------------CCCCcCCcCCCCCCC--------eEEeCCCCeECcccCCC-------CCEEE
Confidence 123678999999865 99999999999987532 68899
Q ss_pred eccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHccccccc
Q 048043 526 VAGTSMSCPHLSGVAALLKSAHPDWSPAAIKSAIMTTADIVS 567 (742)
Q Consensus 526 ~sGTSmAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~ 567 (742)
++|||||||||||++|||+|++|++++.+||++|++||++..
T Consensus 220 ~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 261 (278)
T 2b6n_A 220 ISGTSMASPHVAGVAALYLDENPNLSPAQVTNLLKTRATADK 261 (278)
T ss_dssp ECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESC
T ss_pred eCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC
Confidence 999999999999999999999999999999999999998753
No 27
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}
Probab=100.00 E-value=9.3e-48 Score=402.57 Aligned_cols=237 Identities=33% Similarity=0.450 Sum_probs=204.4
Q ss_pred CCCCccCCCCCCccEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCccccCccccceeecCCCCCCCCCCCCCCCch
Q 048043 129 NSGFWKDSNLGKGVIIGVMDTGITPGHPSFSDEGMPPPPAKWKGKCEFKGAACNNKLIGARNFLQGSTGEPPLDDEGHGT 208 (742)
Q Consensus 129 ~~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~n~ki~~~~~~~~~~~~~~~~d~~gHGT 208 (742)
...+|..+++|+||+|||||||||++||+|.++ +...++|.. ....|..||||
T Consensus 20 ~~~a~~~~~~G~gv~VaViDtGvd~~h~~l~~~-----------------------~~~~~~~~~----~~~~d~~gHGT 72 (276)
T 4dzt_A 20 LSNSYTYTATGRGVNVYVIDTGIRTTHREFGGR-----------------------ARVGYDALG----GNGQDCNGHGT 72 (276)
T ss_dssp CCSCEECSCCCTTCEEEEEESCCCTTCGGGTTC-----------------------EEEEEETTS----SCSCCSSSHHH
T ss_pred cccceecCCCCCCcEEEEEccCCCCCChhHccC-----------------------eeccccCCC----CCCCCCCCCHH
Confidence 356899999999999999999999999999753 233345544 34668899999
Q ss_pred hhhhhhcccccCCCcccccCCcceeeecCcceEEEEEEeccCC-CCHHHHHHHHHHhhhC--CCcEEEEccCCCCCCCCC
Q 048043 209 HTATTAAGNFVNGANVFGQADGTAVGIAPLAHLAIYKVCDFDG-CSESRVYAAMDTAIDD--GVDVLSLSLGAASVPFFE 285 (742)
Q Consensus 209 hVAGiiaG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~--g~~VIn~SlG~~~~~~~~ 285 (742)
||||||+|.. .||||+|+|+.+|++++.+ .+.++++++++|++++ +++|||||||... .
T Consensus 73 ~vAgiiag~~--------------~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~~~vin~S~g~~~----~ 134 (276)
T 4dzt_A 73 HVAGTIGGVT--------------YGVAKAVNLYAVRVLDCNGSGSTSGVIAGVDWVTRNHRRPAVANMSLGGGV----S 134 (276)
T ss_dssp HHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHCCSSEEEEECCCEEC----C
T ss_pred HHHHHHHccc--------------cCCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHhcCCCCeEEEECCCCCC----C
Confidence 9999999872 6999999999999998877 7888999999999987 8999999999753 4
Q ss_pred CHHHHHHHHhhcCCcEEEEecCCCCCCCCCC-CCCCCceEEecccCCcceeEEEEEeCCCeeEeeeeccCCCCCCCCcee
Q 048043 286 DPLAIGSFSAIQKEIFVSCSAGNEGPNPSTS-SNEAPWILSVGASTTDRSIVASVELGNQAVYDGEALFQPKDFPSKQFP 364 (742)
Q Consensus 286 ~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~-~~~~p~vitVga~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 364 (742)
..+..++.++.++|+++|+||||+|...... ++..+++|+||+..
T Consensus 135 ~~~~~a~~~a~~~gvlvv~AAGN~g~~~~~~~Pa~~~~vi~Vga~~---------------------------------- 180 (276)
T 4dzt_A 135 TALDNAVKNSIAAGVVYAVAAGNDNANACNYSPARVAEALTVGATT---------------------------------- 180 (276)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEEC----------------------------------
T ss_pred HHHHHHHHHHHhCCCEEEEECCCCCCCCCCcCcccCCCEEEEEEEC----------------------------------
Confidence 5778888899999999999999999775443 77889999999842
Q ss_pred EEecCCCCCCCCCCcCCCCCCCCccceEEEeecCCcchhhhhHHHhhcCCeEEEEeccCCCCccccCCCccccEEEEehh
Q 048043 365 LIYPGANGNVSSAQCSPGSLSSNIRGKLVLCERGGGERTKKGQVVKDAGGIGMILMNDKLNGYSTLADPHLLPAVHVSYA 444 (742)
Q Consensus 365 ~~~~~~~~~~~~~~c~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~p~~~i~~~ 444 (742)
T Consensus 181 -------------------------------------------------------------------------------- 180 (276)
T 4dzt_A 181 -------------------------------------------------------------------------------- 180 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHhcCCCCeEEEEeceeEecccCCCccccccCCCCCCCCCCCcccceEecCCcEEeccCCCccCCCCCcccce
Q 048043 445 AGESIKAYINSTSSPNATIVFKGTVIGKKSTPELASFSSRGPSIASPGILKPDIIGPGVNILAAWPFSVENKTNTKSTFN 524 (742)
Q Consensus 445 ~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~y~ 524 (742)
..+.+++||++||.. ||+|||++|.++++... ..|.
T Consensus 181 -----------------------------~~~~~~~~S~~g~~~--------dv~ApG~~i~s~~~~~~-------~~~~ 216 (276)
T 4dzt_A 181 -----------------------------SSDARASFSNYGSCV--------DLFAPGASIPSAWYTSD-------TATQ 216 (276)
T ss_dssp -----------------------------TTSBBCTTCCBSTTC--------CEEEECSSEEEECTTSS-------SCEE
T ss_pred -----------------------------CCCCcCCcCCCCCCc--------eEEeCCCCeEccccCCC-------CceE
Confidence 123678999999976 99999999999987632 5899
Q ss_pred eeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHcccccccC
Q 048043 525 MVAGTSMSCPHLSGVAALLKSAHPDWSPAAIKSAIMTTADIVSL 568 (742)
Q Consensus 525 ~~sGTSmAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~ 568 (742)
.++|||||||+|||++|||+|++|++++++||++|++||++...
T Consensus 217 ~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~ 260 (276)
T 4dzt_A 217 TLNGTSMATPHVAGVAALYLEQNPSATPASVASAILNGATTGRL 260 (276)
T ss_dssp EECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESCC
T ss_pred EeeEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCcCCcc
Confidence 99999999999999999999999999999999999999998743
No 28
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...
Probab=100.00 E-value=6.6e-48 Score=402.99 Aligned_cols=239 Identities=32% Similarity=0.462 Sum_probs=203.7
Q ss_pred CccCCCCCCccEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCccccCccccceeecCCCCCCCCCCCCCCCchhhh
Q 048043 132 FWKDSNLGKGVIIGVMDTGITPGHPSFSDEGMPPPPAKWKGKCEFKGAACNNKLIGARNFLQGSTGEPPLDDEGHGTHTA 211 (742)
Q Consensus 132 ~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~n~ki~~~~~~~~~~~~~~~~d~~gHGThVA 211 (742)
.|. ..+|+||+|+|||||||++||+|.++ +...++|.+ .+.|..|||||||
T Consensus 24 ~~~-~~~G~gv~VaViDsGvd~~H~~l~~~-----------------------~~~~~~~~~-----~~~d~~gHGT~vA 74 (279)
T 2pwa_A 24 YYD-ESAGQGSCVYVIDTGIEASHPEFEGR-----------------------AQMVKTYYY-----SSRDGNGHGTHCA 74 (279)
T ss_dssp ECC-TTTTTTEEEEEEESCCCTTCGGGTTC-----------------------EEEEEESSS-----CSSCSSSHHHHHH
T ss_pred ccc-CCCCCCCEEEEEeCCCCCCChhHhCc-----------------------cccccCCCC-----CCCCCCCCHHHHH
Confidence 344 37899999999999999999999753 233455552 3567899999999
Q ss_pred hhhcccccCCCcccccCCcceeeecCcceEEEEEEeccCC-CCHHHHHHHHHHhhhCCC-------cEEEEccCCCCCCC
Q 048043 212 TTAAGNFVNGANVFGQADGTAVGIAPLAHLAIYKVCDFDG-CSESRVYAAMDTAIDDGV-------DVLSLSLGAASVPF 283 (742)
Q Consensus 212 GiiaG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g~-------~VIn~SlG~~~~~~ 283 (742)
|||+|+. .||||+|+|+.+|++++.+ ++.++++++|+|++++++ +|||||||..
T Consensus 75 giia~~~--------------~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~~~~~~~~Vin~S~G~~---- 136 (279)
T 2pwa_A 75 GTVGSRT--------------YGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNNRNCPKGVVASLSLGGG---- 136 (279)
T ss_dssp HHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSCCTTEEEEEECCCEE----
T ss_pred HHHHhcc--------------cccCCCCEEEEEEeEcCCCCcCHHHHHHHHHHHHhcCccccCCCccEEEecCCCC----
Confidence 9999862 6999999999999998877 788999999999999887 9999999975
Q ss_pred CCCHHHHHHHHhhcCCcEEEEecCCCCCCCC-CCCCCCCceEEecccCCcceeEEEEEeCCCeeEeeeeccCCCCCCCCc
Q 048043 284 FEDPLAIGSFSAIQKEIFVSCSAGNEGPNPS-TSSNEAPWILSVGASTTDRSIVASVELGNQAVYDGEALFQPKDFPSKQ 362 (742)
Q Consensus 284 ~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~p~vitVga~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 362 (742)
....+..++.++.++|+++|+||||+|.+.. .+++..+++|+||+..
T Consensus 137 ~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~-------------------------------- 184 (279)
T 2pwa_A 137 YSSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTVGASD-------------------------------- 184 (279)
T ss_dssp CCHHHHHHHHHHHHTTEEEEEECCSSSSBGGGEETTTCTTSEEEEEEC--------------------------------
T ss_pred CCHHHHHHHHHHHHCCCEEEEECCCCCCcCCCcCcccCCcEEEEEEec--------------------------------
Confidence 2457788888899999999999999998653 3577889999999842
Q ss_pred eeEEecCCCCCCCCCCcCCCCCCCCccceEEEeecCCcchhhhhHHHhhcCCeEEEEeccCCCCccccCCCccccEEEEe
Q 048043 363 FPLIYPGANGNVSSAQCSPGSLSSNIRGKLVLCERGGGERTKKGQVVKDAGGIGMILMNDKLNGYSTLADPHLLPAVHVS 442 (742)
Q Consensus 363 ~~~~~~~~~~~~~~~~c~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~p~~~i~ 442 (742)
T Consensus 185 -------------------------------------------------------------------------------- 184 (279)
T 2pwa_A 185 -------------------------------------------------------------------------------- 184 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhHHHHHHHHhcCCCCeEEEEeceeEecccCCCccccccCCCCCCCCCCCcccceEecCCcEEeccCCCccCCCCCccc
Q 048043 443 YAAGESIKAYINSTSSPNATIVFKGTVIGKKSTPELASFSSRGPSIASPGILKPDIIGPGVNILAAWPFSVENKTNTKST 522 (742)
Q Consensus 443 ~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~ 522 (742)
..+.+++||++||.+ ||+|||++|+++++. +.
T Consensus 185 -------------------------------~~~~~~~~S~~G~~~--------di~APG~~i~s~~~~---------~~ 216 (279)
T 2pwa_A 185 -------------------------------RYDRRSSFSNYGSVL--------DIFGPGTDILSTWIG---------GS 216 (279)
T ss_dssp -------------------------------TTSBBCTTCCBSTTC--------CEEEECSSEEEEETT---------TE
T ss_pred -------------------------------CCCCcCCcCCCCCcc--------eEEEecCCeEEeecC---------CC
Confidence 123678999999965 999999999999987 68
Q ss_pred ceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHcccccccCCCCccccCCCCCCCCCcccccccCc
Q 048043 523 FNMVAGTSMSCPHLSGVAALLKSAHPDWSPAAIKSAIMTTADIVSLDGKPIVDQRLLPADMFAVGAGHVNP 593 (742)
Q Consensus 523 y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~vd~ 593 (742)
|..++|||||||||||++|||+|+ |++++.+||++|++||++... ..+|+|..|+
T Consensus 217 ~~~~sGTS~AaP~VaG~aAll~~~-p~lt~~~v~~~L~~tA~~~~~---------------~~~~~g~~n~ 271 (279)
T 2pwa_A 217 TRSISGTSMATPHVAGLAAYLMTL-GKTTAASACRYIADTANKGDL---------------SNIPFGTVNL 271 (279)
T ss_dssp EEEECSHHHHHHHHHHHHHHHHHT-TSCCTTTHHHHHHHHSEESCC---------------BSCCTTSCCE
T ss_pred EEEcCChHHHHHHHHHHHHHHHhC-CCCCHHHHHHHHHHhCccccc---------------CCCCCCCccE
Confidence 999999999999999999999999 999999999999999997632 2367787776
No 29
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=100.00 E-value=1.2e-46 Score=422.83 Aligned_cols=289 Identities=17% Similarity=0.184 Sum_probs=216.2
Q ss_pred CCCCccCCCCCCccEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCccccCccccceeecCCCCCCC----CCCCCC
Q 048043 129 NSGFWKDSNLGKGVIIGVMDTGITPGHPSFSDEGMPPPPAKWKGKCEFKGAACNNKLIGARNFLQGSTGE----PPLDDE 204 (742)
Q Consensus 129 ~~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~n~ki~~~~~~~~~~~~~----~~~d~~ 204 (742)
+..+|..+++|+||+|||||||||++||+|.++-. ....++|.+...+. .+.|..
T Consensus 27 ~~~aw~~g~~G~gv~VaViDtGvd~~Hpdl~~~~~---------------------~~~~~d~~~~~~~p~~~~~~~d~~ 85 (471)
T 1p8j_A 27 VKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYD---------------------PGASFDVNDQDPDPQPRYTQMNDN 85 (471)
T ss_dssp CHHHHHTTCSCTTCEEEEEEBCCCTTCTTTGGGBC---------------------GGGCEETTTTBSCCCCCCCTTCTT
T ss_pred hHHHHhcCCCCCCCEEEEEeCCcCCCChhHhhccC---------------------ccCcccccCCCCCCCCccCCCCCC
Confidence 45699999999999999999999999999985310 01124444432111 346889
Q ss_pred CCchhhhhhhcccccCCCcccccCCcceeeecCcceEEEEEEeccCCCCHHHHHHHHHHhhh-CCCcEEEEccCCCCCC-
Q 048043 205 GHGTHTATTAAGNFVNGANVFGQADGTAVGIAPLAHLAIYKVCDFDGCSESRVYAAMDTAID-DGVDVLSLSLGAASVP- 282 (742)
Q Consensus 205 gHGThVAGiiaG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~-~g~~VIn~SlG~~~~~- 282 (742)
+|||||||||||...++ . .+.||||+|+|+.+|+++ +..+++++|++|+++ ++++|||||||.....
T Consensus 86 gHGT~vAGiiaa~~~n~-------~-g~~GvAp~a~i~~~rv~~---g~~~~~~~ai~~a~~~~~~~Vin~S~G~~~~~~ 154 (471)
T 1p8j_A 86 RHGTRCAGEVAAVANNG-------V-CGVGVAYNARIGGVRMLD---GEVTDAVEARSLGLNPNHIHIYSASWGPEDDGK 154 (471)
T ss_dssp CHHHHHHHHHHCCSSSS-------S-SCCCTTTTSEEEEEECSS---SCCCHHHHHHHHTSCTTTCCEEEECCBSCCSSS
T ss_pred CcHHHHHHHHHeeccCC-------C-CCEEECCCCeEEEEEccC---CchhHHHHHHHhhhccCCCeEEEeccCcCCCCC
Confidence 99999999999874221 1 237999999999999986 346789999999999 8999999999986421
Q ss_pred ---CCCCHHHHHHHHhhc-----CCcEEEEecCCCCCCCCC----CCCCCCceEEecccCCcceeEEEEEeCCCeeEeee
Q 048043 283 ---FFEDPLAIGSFSAIQ-----KEIFVSCSAGNEGPNPST----SSNEAPWILSVGASTTDRSIVASVELGNQAVYDGE 350 (742)
Q Consensus 283 ---~~~~~~~~a~~~a~~-----~Gi~vV~AAGN~g~~~~~----~~~~~p~vitVga~~~~~~~~~~~~~~~g~~~~~~ 350 (742)
.....+..++.++.+ +|+++|+||||+|..... ....++++|+|||.+
T Consensus 155 ~~~~~~~~~~~a~~~a~~~~~~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vItVgA~~-------------------- 214 (471)
T 1p8j_A 155 TVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSAT-------------------- 214 (471)
T ss_dssp CCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCBGGGBTTTTSTTEEEEEEEC--------------------
T ss_pred cccCcHHHHHHHHHHHHHhhccCCCeEEEEeCCCCCCCCCCcCcCcccCCCceEEEeccc--------------------
Confidence 112334455555543 699999999999976321 123458899999842
Q ss_pred eccCCCCCCCCceeEEecCCCCCCCCCCcCCCCCCCCccceEEEeecCCcchhhhhHHHhhcCCeEEEEeccCCCCcccc
Q 048043 351 ALFQPKDFPSKQFPLIYPGANGNVSSAQCSPGSLSSNIRGKLVLCERGGGERTKKGQVVKDAGGIGMILMNDKLNGYSTL 430 (742)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~ 430 (742)
T Consensus 215 -------------------------------------------------------------------------------- 214 (471)
T 1p8j_A 215 -------------------------------------------------------------------------------- 214 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccccEEEEehhhHHHHHHHHhcCCCCeEEEEeceeEecccCCCccccccCCCCCCCCCCCcccceEecCCcEEeccC
Q 048043 431 ADPHLLPAVHVSYAAGESIKAYINSTSSPNATIVFKGTVIGKKSTPELASFSSRGPSIASPGILKPDIIGPGVNILAAWP 510 (742)
Q Consensus 431 ~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~ 510 (742)
..+.+++||++||.. ....+|...+||..|+++.+
T Consensus 215 -------------------------------------------~~g~~a~~S~~g~~~--~~~~~~~~~~~g~~i~st~~ 249 (471)
T 1p8j_A 215 -------------------------------------------QFGNVPWYSEACSST--LATTYSSGNQNEKQIVTTDL 249 (471)
T ss_dssp -------------------------------------------TTSCCCTTCCBCTTC--CEEEECCCSTTSCCEEEEET
T ss_pred -------------------------------------------CCCCcccccCCCCcc--eEEeCCCCCCCCCCEEEeeC
Confidence 123678999999987 33455666666789999876
Q ss_pred CCccCCCCCcccceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHcccccccCCCCccccCCCCCCCCCcccccc
Q 048043 511 FSVENKTNTKSTFNMVAGTSMSCPHLSGVAALLKSAHPDWSPAAIKSAIMTTADIVSLDGKPIVDQRLLPADMFAVGAGH 590 (742)
Q Consensus 511 ~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~G~G~ 590 (742)
.. +.|..++|||||||||||++|||+|++|+|++++||++|++||++.+...............+..||||+
T Consensus 250 ~~--------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~~~n~~g~~~~~~~G~G~ 321 (471)
T 1p8j_A 250 RQ--------KCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNADDWATNGVGRKVSHSYGYGL 321 (471)
T ss_dssp TT--------EEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCTTCCCSCCEECTTSCEEBTTTBTCB
T ss_pred CC--------CccccCCCcccccchhhhHHHHHHhhCCCCCHHHHHHHHHhcCccCCCCCCCceecCCCcccCCCCCCEE
Confidence 42 5689999999999999999999999999999999999999999988654322222211123456899999
Q ss_pred cCcCCcCCCCcc
Q 048043 591 VNPSSANDPGLI 602 (742)
Q Consensus 591 vd~~~Al~~~lv 602 (742)
||+.+|++...-
T Consensus 322 vda~~Av~~a~~ 333 (471)
T 1p8j_A 322 LDAGAMVALAQN 333 (471)
T ss_dssp CCHHHHHHHHHT
T ss_pred EcHhHHHHHhhc
Confidence 999999985443
No 30
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=100.00 E-value=1.9e-46 Score=433.46 Aligned_cols=293 Identities=26% Similarity=0.267 Sum_probs=205.6
Q ss_pred CCCCccCCCCCCccEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCccccCccccceeecCCCCCCCCCCC-CCCCc
Q 048043 129 NSGFWKDSNLGKGVIIGVMDTGITPGHPSFSDEGMPPPPAKWKGKCEFKGAACNNKLIGARNFLQGSTGEPPLD-DEGHG 207 (742)
Q Consensus 129 ~~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~n~ki~~~~~~~~~~~~~~~~d-~~gHG 207 (742)
+..+|..+++|+||+|||||||||++||+|.++- ..+.++|..+.++..+.| ..|||
T Consensus 59 ~~~aw~~g~~G~gV~VaViDtGid~~Hpdl~~~~----------------------~~~~~~~~~~~~d~~p~d~~~gHG 116 (600)
T 2oxa_A 59 LWWAHRTGVLGHGVNVAVVDDGLAIAHPDLADNV----------------------RPGSKNVVTGSDDPTPTDPDTGHG 116 (600)
T ss_dssp CHHHHHTTCSCTTCEEEEESSCCCTTCTTTGGGB----------------------CSCCBCTTTCSSCCCCCSTTCCHH
T ss_pred hHHHHhcCCCCCCcEEEEecCCcCCCCcchhhcc----------------------ccCceeccCCCCCCCCCCCCCCCc
Confidence 3558999999999999999999999999998531 112344544432233455 79999
Q ss_pred hhhhhhhcccccCCCcccccCCcceeeecCcceEEEEEEeccCCCCH--HHHHHHHHHhhhCCCcEEEEccCCCCC-CCC
Q 048043 208 THTATTAAGNFVNGANVFGQADGTAVGIAPLAHLAIYKVCDFDGCSE--SRVYAAMDTAIDDGVDVLSLSLGAASV-PFF 284 (742)
Q Consensus 208 ThVAGiiaG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g~~~--~~i~~ai~~a~~~g~~VIn~SlG~~~~-~~~ 284 (742)
|||||||||. .++ . .+.||||+|+|+.+|+++..+... ..+++....+..++++|||||||.... ...
T Consensus 117 T~vAGiiaa~-~n~-------~-g~~GVAp~A~l~~vkv~~~~~~~~~~~~~~~~~~~a~~~~~~Vin~S~G~~~~~~~~ 187 (600)
T 2oxa_A 117 TSVSGIIAAV-DNA-------I-GTKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASRDNRVFNHSYRMSVVDPRS 187 (600)
T ss_dssp HHHHHHHHCC-SSS-------S-SCCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTTSHHHHTCSEEEECCCCCCSSCCC
T ss_pred cHHHHHhhcc-cCC-------C-cceEEccCCceEEEeeecCcccchHHHHHHHHhhhhcccCCeEEEEeccCCCCCccc
Confidence 9999999987 221 1 137999999999999998776332 344444444777899999999998742 222
Q ss_pred CC----HHHHHHHH---hhcCCcEEEEecCCCCCCCC----------------------CCCCCCCceEEecccCCccee
Q 048043 285 ED----PLAIGSFS---AIQKEIFVSCSAGNEGPNPS----------------------TSSNEAPWILSVGASTTDRSI 335 (742)
Q Consensus 285 ~~----~~~~a~~~---a~~~Gi~vV~AAGN~g~~~~----------------------~~~~~~p~vitVga~~~~~~~ 335 (742)
.+ .+..++.. +.++|++||+||||+|.... ..++.++|+|+|||.
T Consensus 188 ~~~~~~~~~~~~~~~~~a~~~GilvV~AAGN~g~~~~~~~~~~~Pa~~~~~~p~~~~n~~~~~~s~~vItVgA~------ 261 (600)
T 2oxa_A 188 ANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENSNLDPSNSNFWNLVVSAL------ 261 (600)
T ss_dssp SCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESCSSCCCSSBTTSSGGGGSSSEEEEEEE------
T ss_pred cCchhHHHHHHHHHHHHhccCCcEEEEecCCCCccCCCCcceecCccccccccccccccCCcccCceeEEEecc------
Confidence 22 22222222 45789999999999986421 011223344444442
Q ss_pred EEEEEeCCCeeEeeeeccCCCCCCCCceeEEecCCCCCCCCCCcCCCCCCCCccceEEEeecCCcchhhhhHHHhhcCCe
Q 048043 336 VASVELGNQAVYDGEALFQPKDFPSKQFPLIYPGANGNVSSAQCSPGSLSSNIRGKLVLCERGGGERTKKGQVVKDAGGI 415 (742)
Q Consensus 336 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~g~~ 415 (742)
T Consensus 262 -------------------------------------------------------------------------------- 261 (600)
T 2oxa_A 262 -------------------------------------------------------------------------------- 261 (600)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEeccCCCCccccCCCccccEEEEehhhHHHHHHHHhcCCCCeEEEEeceeEecccCCCccccccCCCCCCCCCCCcc
Q 048043 416 GMILMNDKLNGYSTLADPHLLPAVHVSYAAGESIKAYINSTSSPNATIVFKGTVIGKKSTPELASFSSRGPSIASPGILK 495 (742)
Q Consensus 416 ~~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~K 495 (742)
...+.+++||++||+.
T Consensus 262 ---------------------------------------------------------~~~g~~a~fS~~G~~v------- 277 (600)
T 2oxa_A 262 ---------------------------------------------------------NADGVRSSYSSVGSNI------- 277 (600)
T ss_dssp ---------------------------------------------------------CTTSSBCTTCCBCTTE-------
T ss_pred ---------------------------------------------------------cCCCCcCCcCCCCCCe-------
Confidence 2345789999999987
Q ss_pred cceEecCCcEEeccCCCc-------c------------------CCCCCcccceeeccccchhHHHHHHHHHHHhhCCCC
Q 048043 496 PDIIGPGVNILAAWPFSV-------E------------------NKTNTKSTFNMVAGTSMSCPHLSGVAALLKSAHPDW 550 (742)
Q Consensus 496 PDI~APG~~I~sa~~~~~-------~------------------~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~ 550 (742)
||+|||++|.+..+... . ..+...+.|..++|||||||||||+||||+|++|+|
T Consensus 278 -dv~APG~~i~~~~p~i~ttd~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~sGTS~AaP~VAGvaALl~s~~P~l 356 (600)
T 2oxa_A 278 -FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSATPSTSGAMALLMSAYPDL 356 (600)
T ss_dssp -EEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHHHHHHHHHHHHHHHHSTTS
T ss_pred -EEEeccCCCCcCCCceEeccccccccccccccccccccccccccccCCcccccccccchHHhHHHHHHHHHHHHhCCCC
Confidence 99999999655433210 0 001112348999999999999999999999999999
Q ss_pred CHHHHHHHHHcccccccCCCCccc--------------------cCCCCCCCCCcccccccCcCCcCCCCccc
Q 048043 551 SPAAIKSAIMTTADIVSLDGKPIV--------------------DQRLLPADMFAVGAGHVNPSSANDPGLIY 603 (742)
Q Consensus 551 s~~~ik~~L~~TA~~~~~~g~~~~--------------------~~~~~~~~~~~~G~G~vd~~~Al~~~lv~ 603 (742)
++++||++|++||++++..+.++. .+......+..||||+||+.+|++.+.-+
T Consensus 357 t~~~vk~~L~~tA~~~~~~~~~~~~~~~~~~G~~~~~~~~~~w~~n~~g~~~~~~~G~G~vda~~Av~~A~~~ 429 (600)
T 2oxa_A 357 SVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPTYGFGLIDVNKALELAANH 429 (600)
T ss_dssp CHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTTTBTCBCCHHHHHHHHTTC
T ss_pred CHHHHHHHHHHhCccCCcccccccccccccccccccccccccccccCCCccccccCCCchhhHHHHHHHHHhc
Confidence 999999999999999875542211 11122234578999999999999865444
No 31
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Probab=100.00 E-value=2.3e-46 Score=415.80 Aligned_cols=269 Identities=20% Similarity=0.271 Sum_probs=202.3
Q ss_pred CccCCCCCCccEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCccccCccccceeecCCC-CC---CCCCCCCCCCc
Q 048043 132 FWKDSNLGKGVIIGVMDTGITPGHPSFSDEGMPPPPAKWKGKCEFKGAACNNKLIGARNFLQG-ST---GEPPLDDEGHG 207 (742)
Q Consensus 132 ~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~n~ki~~~~~~~~~-~~---~~~~~d~~gHG 207 (742)
.|..+++|+||+|+|||||||++||+|.++- ....+++..+ +. .....|..|||
T Consensus 18 aw~~~~tG~GV~VaVIDTGId~~HpdL~gr~----------------------~~~~~~~v~~~dg~~f~~~~~D~~GHG 75 (546)
T 2qtw_B 18 EYQPPDGGSLVEVYLLDTSIQSDHREIEGRV----------------------MVTDFENVPEEDGTRFHRQASKCDSHG 75 (546)
T ss_dssp ------CCTTSEEEEEESCCCTTSTTTTTTE----------------------EEEEEECCCCCC-------CTTTTHHH
T ss_pred hcccCCCCCCcEEEEECCCCCCCChHHcccc----------------------cccCcccccCCCCccccCCCCCCCChH
Confidence 7888999999999999999999999998641 0001111111 00 02456889999
Q ss_pred hhhhhhhcccccCCCcccccCCcceeeecCcceEEEEEEeccCC-CCHHHHHHHHHHhhhC------CCcEEEEccCCCC
Q 048043 208 THTATTAAGNFVNGANVFGQADGTAVGIAPLAHLAIYKVCDFDG-CSESRVYAAMDTAIDD------GVDVLSLSLGAAS 280 (742)
Q Consensus 208 ThVAGiiaG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~------g~~VIn~SlG~~~ 280 (742)
|||||||+|+. .||||+|+|+.+|+++.+| ++.+++++||+|++++ +++|||||||+.
T Consensus 76 ThVAGIIag~~--------------~GVAP~A~L~~vkVl~~~G~g~~s~ii~ai~~a~~~~~~~~~g~~VINmSlGg~- 140 (546)
T 2qtw_B 76 THLAGVVSGRD--------------AGVAKGASMRSLRVLNCQGKGTVSGTLIGLEFIRKSQLVQPVGPLVVLLPLAGG- 140 (546)
T ss_dssp HHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHHHHHSCCSCEEEEECEEEE-
T ss_pred HHHHHHHhccC--------------CCcCCCCEEEEEEEECCCCCcCHHHHHHHHHHHHHhhhhccCCCeEEEecCCCC-
Confidence 99999999873 5999999999999998877 7788999999999974 899999999975
Q ss_pred CCCCCCHHHHHHHHhhcCCcEEEEecCCCCCCCC-CCCCCCCceEEecccCCcceeEEEEEeCCCeeEeeeeccCCCCCC
Q 048043 281 VPFFEDPLAIGSFSAIQKEIFVSCSAGNEGPNPS-TSSNEAPWILSVGASTTDRSIVASVELGNQAVYDGEALFQPKDFP 359 (742)
Q Consensus 281 ~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~p~vitVga~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 359 (742)
+...+..++.++.++|++||+||||+|.+.. .+++..+++|+|||++.+.
T Consensus 141 ---~s~~l~~Ai~~A~~~GvlvVaAAGN~g~d~~~~sPAs~~~VItVGA~d~~g-------------------------- 191 (546)
T 2qtw_B 141 ---YSRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQD-------------------------- 191 (546)
T ss_dssp ---CCHHHHHHHHHHHHTTCEEEEECCSBSSBGGGEETTTCTTSEEEEEECTTS--------------------------
T ss_pred ---CcHHHHHHHHHHHhCCCEEEEECCCCCCCCCccCcccCCCEEEEEEecCCC--------------------------
Confidence 2457788888999999999999999997653 3478889999999953211
Q ss_pred CCceeEEecCCCCCCCCCCcCCCCCCCCccceEEEeecCCcchhhhhHHHhhcCCeEEEEeccCCCCccccCCCccccEE
Q 048043 360 SKQFPLIYPGANGNVSSAQCSPGSLSSNIRGKLVLCERGGGERTKKGQVVKDAGGIGMILMNDKLNGYSTLADPHLLPAV 439 (742)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~p~~ 439 (742)
T Consensus 192 -------------------------------------------------------------------------------- 191 (546)
T 2qtw_B 192 -------------------------------------------------------------------------------- 191 (546)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEehhhHHHHHHHHhcCCCCeEEEEeceeEecccCCCccc----cccCCCCCCCCCCCcccceEecCCcEEeccCCCccC
Q 048043 440 HVSYAAGESIKAYINSTSSPNATIVFKGTVIGKKSTPELA----SFSSRGPSIASPGILKPDIIGPGVNILAAWPFSVEN 515 (742)
Q Consensus 440 ~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a----~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~ 515 (742)
.++ .||+||+. |||+|||++|+++++...
T Consensus 192 -------------------------------------~~a~~s~~fSn~G~~--------vDI~APG~~I~St~~~~~-- 224 (546)
T 2qtw_B 192 -------------------------------------QPVTLGTLGTNFGRC--------VDLFAPGEDIIGASSDCS-- 224 (546)
T ss_dssp -------------------------------------CBCEETTEECCBSTT--------CCEEEECSSEEEECTTST--
T ss_pred -------------------------------------CcccccCCcCCCCCc--------ceEEecCccEEeeccCCC--
Confidence 112 28999974 499999999999988632
Q ss_pred CCCCcccceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHcccccccCCCCccc------cCC---CCCCCCCcc
Q 048043 516 KTNTKSTFNMVAGTSMSCPHLSGVAALLKSAHPDWSPAAIKSAIMTTADIVSLDGKPIV------DQR---LLPADMFAV 586 (742)
Q Consensus 516 ~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~g~~~~------~~~---~~~~~~~~~ 586 (742)
..|..++|||||||||||++|||+|++|+|+++|||++|++||.+.......+. ... ..+.....+
T Consensus 225 -----~~y~~~SGTSmAAP~VAG~aALlls~~P~ltp~qVr~~L~~tAt~~~i~~~~~p~~~~~~tpN~l~~~~~~~~~~ 299 (546)
T 2qtw_B 225 -----TCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKDVINEAWFPEDQRVLTPNLVAALPPSTHGA 299 (546)
T ss_dssp -----TCEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTSEESCSCGGGSCHHHHTTSCCEECCCCCTTCC-
T ss_pred -----CcEeeeCcCcHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhccccccCCccCccccCCCCccchhccCCccccc
Confidence 579999999999999999999999999999999999999999986532221000 000 112245567
Q ss_pred cccc--cCcCCcCC
Q 048043 587 GAGH--VNPSSAND 598 (742)
Q Consensus 587 G~G~--vd~~~Al~ 598 (742)
|+|+ .++..+..
T Consensus 300 G~~l~~~~~w~a~s 313 (546)
T 2qtw_B 300 GWQLFCRTVWSAHS 313 (546)
T ss_dssp -CCCEEEEEECCCC
T ss_pred CCCcchhchhccCC
Confidence 8888 77777765
No 32
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=100.00 E-value=4.3e-46 Score=421.09 Aligned_cols=283 Identities=19% Similarity=0.210 Sum_probs=215.8
Q ss_pred CCCCccCCCCCCccEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCccccCccccceeecCCCCCC-CCCCCCCCCc
Q 048043 129 NSGFWKDSNLGKGVIIGVMDTGITPGHPSFSDEGMPPPPAKWKGKCEFKGAACNNKLIGARNFLQGSTG-EPPLDDEGHG 207 (742)
Q Consensus 129 ~~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~n~ki~~~~~~~~~~~~-~~~~d~~gHG 207 (742)
+..+|..+++|+||+|||||||||++||+|.++- ...+.++|.++.+. .+..|..|||
T Consensus 43 ~~~aw~~g~tG~gv~VaViDtGvd~~Hpdl~~~~---------------------~~~~~~d~~~~~~~~~p~~d~~gHG 101 (503)
T 2id4_A 43 VLDLWYNNITGAGVVAAIVDDGLDYENEDLKDNF---------------------CAEGSWDFNDNTNLPKPRLSDDYHG 101 (503)
T ss_dssp CHHHHHTTCSCTTCEEEEEESCCCTTSTTTTTTB---------------------CGGGCEETTTTBSCCCCCSTTTTHH
T ss_pred hHHHHhcCCCCCCeEEEEEeCCCCCCChhHhhcc---------------------cccCcccCCCCCCCCCCCCCCCChH
Confidence 4568999999999999999999999999998641 01123455544321 2235789999
Q ss_pred hhhhhhhcccccCCCcccccCCcceeeecCcceEEEEEEeccCCCCHHHHHHHHHHhhhCCCcEEEEccCCCCCC----C
Q 048043 208 THTATTAAGNFVNGANVFGQADGTAVGIAPLAHLAIYKVCDFDGCSESRVYAAMDTAIDDGVDVLSLSLGAASVP----F 283 (742)
Q Consensus 208 ThVAGiiaG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~~g~~VIn~SlG~~~~~----~ 283 (742)
|||||||||...++ .+ +.||||+|+|+.+|+++.. .+..++++||+|+++++ +|||||||..... .
T Consensus 102 T~vAGiiaa~~~n~-------~~-~~GvAp~a~i~~~rv~~~~-~~~~~~~~ai~~a~~~~-~Iin~S~G~~~~~~~~~~ 171 (503)
T 2id4_A 102 TRCAGEIAAKKGNN-------FC-GVGVGYNAKISGIRILSGD-ITTEDEAASLIYGLDVN-DIYSCSWGPADDGRHLQG 171 (503)
T ss_dssp HHHHHHHHCCSSSS-------SS-CCCTTTTSEEEEEECTTSC-CCHHHHHHHTTTTTTTC-SEEEECEESCCSSSCCBC
T ss_pred HHHHHHHHhccCCC-------CC-cEEECCCCEEEEEEeeCCC-CChHHHHHHHHhHhhcC-CEEEeCCCcCCCCccccC
Confidence 99999999874221 12 3799999999999999754 67788999999999998 9999999986421 1
Q ss_pred CCCHHHHHHHHhh-----cCCcEEEEecCCCCCCCC--CCC--CCCCceEEecccCCcceeEEEEEeCCCeeEeeeeccC
Q 048043 284 FEDPLAIGSFSAI-----QKEIFVSCSAGNEGPNPS--TSS--NEAPWILSVGASTTDRSIVASVELGNQAVYDGEALFQ 354 (742)
Q Consensus 284 ~~~~~~~a~~~a~-----~~Gi~vV~AAGN~g~~~~--~~~--~~~p~vitVga~~~~~~~~~~~~~~~g~~~~~~~~~~ 354 (742)
....+..++.++. .+|+++|+||||+|.... .++ ..++++|+|||.+
T Consensus 172 ~~~~~~~a~~~a~~~~r~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vI~VgA~~------------------------ 227 (503)
T 2id4_A 172 PSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAID------------------------ 227 (503)
T ss_dssp CCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCCGGGBTTTTCTTEEEEEEEC------------------------
T ss_pred chHHHHHHHHHHHHhcccCCCcEEEEecCCCCCcCCCCCCCcccCCCCEEEEEeeC------------------------
Confidence 2234566666665 479999999999997532 222 3567899999842
Q ss_pred CCCCCCCceeEEecCCCCCCCCCCcCCCCCCCCccceEEEeecCCcchhhhhHHHhhcCCeEEEEeccCCCCccccCCCc
Q 048043 355 PKDFPSKQFPLIYPGANGNVSSAQCSPGSLSSNIRGKLVLCERGGGERTKKGQVVKDAGGIGMILMNDKLNGYSTLADPH 434 (742)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~ 434 (742)
T Consensus 228 -------------------------------------------------------------------------------- 227 (503)
T 2id4_A 228 -------------------------------------------------------------------------------- 227 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccEEEEehhhHHHHHHHHhcCCCCeEEEEeceeEecccCCCccccccCCCCCCCCCCCcccceEe----cCCcEEeccC
Q 048043 435 LLPAVHVSYAAGESIKAYINSTSSPNATIVFKGTVIGKKSTPELASFSSRGPSIASPGILKPDIIG----PGVNILAAWP 510 (742)
Q Consensus 435 ~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~A----PG~~I~sa~~ 510 (742)
..+.+++||++||.. |++| ||..|+++..
T Consensus 228 ---------------------------------------~~~~~a~~S~~g~~~--------~~~a~~~gpG~~I~st~~ 260 (503)
T 2id4_A 228 ---------------------------------------HKDLHPPYSEGCSAV--------MAVTYSSGSGEYIHSSDI 260 (503)
T ss_dssp ---------------------------------------TTSCCCTTCCCCTTE--------EEEEECSBTTBCEEEECS
T ss_pred ---------------------------------------CCCCcCCcCCCCCcc--------eEeecCCCCCCceEeecC
Confidence 123678999999987 8887 8999999944
Q ss_pred CCccCCCCCcccceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHcccccccCC-CCccccCCCCCCCCCccccc
Q 048043 511 FSVENKTNTKSTFNMVAGTSMSCPHLSGVAALLKSAHPDWSPAAIKSAIMTTADIVSLD-GKPIVDQRLLPADMFAVGAG 589 (742)
Q Consensus 511 ~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~-g~~~~~~~~~~~~~~~~G~G 589 (742)
.. +.|..++|||||||||||++|||+|++|+|++++||++|++||+++... .............+..||||
T Consensus 261 ~~--------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~~~~~~~g~~~~~~~G~G 332 (503)
T 2id4_A 261 NG--------RCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSILSAVGLEKNADGDWRDSAMGKKYSHRYGFG 332 (503)
T ss_dssp TT--------CEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCCTTCGGGCCEECSSSSEEBTTTBTC
T ss_pred CC--------CceecCCCccccchhhhHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCcCCCceecCCCCccCcccCCc
Confidence 31 6899999999999999999999999999999999999999999987643 11111111112335679999
Q ss_pred ccCcCCcCCCCc
Q 048043 590 HVNPSSANDPGL 601 (742)
Q Consensus 590 ~vd~~~Al~~~l 601 (742)
+||+.+|++...
T Consensus 333 ~vda~~Av~~a~ 344 (503)
T 2id4_A 333 KIDAHKLIEMSK 344 (503)
T ss_dssp BCCHHHHHHHHT
T ss_pred EecHHHHHHHHh
Confidence 999999998543
No 33
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A
Probab=100.00 E-value=8e-46 Score=388.49 Aligned_cols=228 Identities=31% Similarity=0.454 Sum_probs=196.8
Q ss_pred CccCCCCCCccEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCccccCccccceeecCCCCCCCCCCCCCCCchhhh
Q 048043 132 FWKDSNLGKGVIIGVMDTGITPGHPSFSDEGMPPPPAKWKGKCEFKGAACNNKLIGARNFLQGSTGEPPLDDEGHGTHTA 211 (742)
Q Consensus 132 ~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~n~ki~~~~~~~~~~~~~~~~d~~gHGThVA 211 (742)
.|... +|+||+|||||||||++||+|.++ +...++|..+ ..|..|||||||
T Consensus 25 ~~~~~-~G~gv~VaViDtGvd~~h~~l~~~-----------------------~~~~~~~~~~-----~~d~~gHGT~vA 75 (279)
T 3f7m_A 25 AYDTS-AGAGACVYVIDTGVEDTHPDFEGR-----------------------AKQIKSYAST-----ARDGHGHGTHCA 75 (279)
T ss_dssp EECTT-TTTTEEEEEEESCCCTTCGGGTTC-----------------------EEEEEECSSS-----SSCSSSHHHHHH
T ss_pred eecCC-CCCCCEEEEEcCCCCCCChhhccc-----------------------cccccCCCCC-----CCCCCCcHHHHH
Confidence 56655 999999999999999999999753 3334555543 238899999999
Q ss_pred hhhcccccCCCcccccCCcceeeecCcceEEEEEEeccCC-CCHHHHHHHHHHhhhCC-------CcEEEEccCCCCCCC
Q 048043 212 TTAAGNFVNGANVFGQADGTAVGIAPLAHLAIYKVCDFDG-CSESRVYAAMDTAIDDG-------VDVLSLSLGAASVPF 283 (742)
Q Consensus 212 GiiaG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g-------~~VIn~SlG~~~~~~ 283 (742)
|||+|+. .||||+|+|+.+|+++..+ ++.++++++++|+++++ ++|||||||..
T Consensus 76 gii~~~~--------------~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~Vin~S~g~~---- 137 (279)
T 3f7m_A 76 GTIGSKT--------------WGVAKKVSIFGVKVLDDSGSGSLSNIIAGMDFVASDRQSRNCPRRTVASMSLGGG---- 137 (279)
T ss_dssp HHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSCCTTEEEEEECCCEE----
T ss_pred HHHhcCc--------------cccCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhccccccCCCCeEEEeCCCcC----
Confidence 9999862 6999999999999998876 78899999999999876 89999999975
Q ss_pred CCCHHHHHHHHhhcCCcEEEEecCCCCCCCCC-CCCCCCceEEecccCCcceeEEEEEeCCCeeEeeeeccCCCCCCCCc
Q 048043 284 FEDPLAIGSFSAIQKEIFVSCSAGNEGPNPST-SSNEAPWILSVGASTTDRSIVASVELGNQAVYDGEALFQPKDFPSKQ 362 (742)
Q Consensus 284 ~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~-~~~~~p~vitVga~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 362 (742)
....+..++.++.++|+++|+||||+|..... .++..+++|+||+..
T Consensus 138 ~~~~~~~a~~~a~~~gv~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~-------------------------------- 185 (279)
T 3f7m_A 138 YSAALNQAAARLQSSGVFVAVAAGNDNRDAANTSPASEPTVCTVGATD-------------------------------- 185 (279)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEEC--------------------------------
T ss_pred ccHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCcCCCCCCCEEEEeecC--------------------------------
Confidence 44678888889999999999999999987543 377889999999842
Q ss_pred eeEEecCCCCCCCCCCcCCCCCCCCccceEEEeecCCcchhhhhHHHhhcCCeEEEEeccCCCCccccCCCccccEEEEe
Q 048043 363 FPLIYPGANGNVSSAQCSPGSLSSNIRGKLVLCERGGGERTKKGQVVKDAGGIGMILMNDKLNGYSTLADPHLLPAVHVS 442 (742)
Q Consensus 363 ~~~~~~~~~~~~~~~~c~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~p~~~i~ 442 (742)
T Consensus 186 -------------------------------------------------------------------------------- 185 (279)
T 3f7m_A 186 -------------------------------------------------------------------------------- 185 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhHHHHHHHHhcCCCCeEEEEeceeEecccCCCccccccCCCCCCCCCCCcccceEecCCcEEeccCCCccCCCCCccc
Q 048043 443 YAAGESIKAYINSTSSPNATIVFKGTVIGKKSTPELASFSSRGPSIASPGILKPDIIGPGVNILAAWPFSVENKTNTKST 522 (742)
Q Consensus 443 ~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~ 522 (742)
..+.+++||++||.. ||+|||++|+++++. +.
T Consensus 186 -------------------------------~~~~~~~~S~~g~~~--------di~ApG~~i~s~~~~---------~~ 217 (279)
T 3f7m_A 186 -------------------------------SNDVRSTFSNYGRVV--------DIFAPGTSITSTWIG---------GR 217 (279)
T ss_dssp -------------------------------TTSBBCTTCCBSTTC--------CEEEECSSEEEECGG---------GC
T ss_pred -------------------------------CCCCCCCCCCCCCCC--------eEEECCCCeEeecCC---------CC
Confidence 123678999999965 999999999999987 78
Q ss_pred ceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHccccccc
Q 048043 523 FNMVAGTSMSCPHLSGVAALLKSAHPDWSPAAIKSAIMTTADIVS 567 (742)
Q Consensus 523 y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~ 567 (742)
|..++|||||||+|||++|||+|++|+ ++++||++|++||++..
T Consensus 218 ~~~~sGTS~AaP~vaG~aAll~~~~p~-t~~~v~~~L~~tA~~~~ 261 (279)
T 3f7m_A 218 TNTISGTSMATPHIAGLAAYLFGLEGG-SAGAMCGRIQTLSTKNV 261 (279)
T ss_dssp EEEECSHHHHHHHHHHHHHHHHHHTCC-CTTTHHHHHHHHSEESC
T ss_pred EEEeeEHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHhccccc
Confidence 999999999999999999999999999 99999999999998764
No 34
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=100.00 E-value=2.8e-44 Score=417.02 Aligned_cols=312 Identities=22% Similarity=0.214 Sum_probs=200.9
Q ss_pred CCCCccCCCCCCccEEEEEcccCCCCCCCCCCCCCCCCCCccccccccCccccCccccceeecCCCCCC-CCCCCCCCCc
Q 048043 129 NSGFWKDSNLGKGVIIGVMDTGITPGHPSFSDEGMPPPPAKWKGKCEFKGAACNNKLIGARNFLQGSTG-EPPLDDEGHG 207 (742)
Q Consensus 129 ~~~~~~~~~~G~gV~VaVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~n~ki~~~~~~~~~~~~-~~~~d~~gHG 207 (742)
+..+|.++++|+||+|||||||||++||||.++- ..+.++|..+.++ .+..|.++||
T Consensus 59 v~~aw~~g~tG~GV~VaViDtGid~~HpDL~~n~----------------------~~~~~~~~~~~~dp~p~~~~~gHG 116 (600)
T 3hjr_A 59 LWWAHRTGVLGQGVNVAVVDDGLAIAHPDLADNV----------------------RPGSKNVVTGSDDPTPTDPDTAHG 116 (600)
T ss_dssp CHHHHHHTCSCTTCEEEEESSCCCTTCTTTGGGB----------------------CSCCBCTTTSSSCCCCCSTTCCHH
T ss_pred HHHHHHcCCCCCCeEEEEEcCCCCCCChhHhhcc----------------------ccCcceeecCCCCCCCCCCCCChH
Confidence 3458999999999999999999999999998531 1122344443322 2334678999
Q ss_pred hhhhhhhcccccCCCcccccCCcceeeecCcceEEEEEEeccCC-CCHHHHHHHH-HHhhhCCCcEEEEccCCCC-CCCC
Q 048043 208 THTATTAAGNFVNGANVFGQADGTAVGIAPLAHLAIYKVCDFDG-CSESRVYAAM-DTAIDDGVDVLSLSLGAAS-VPFF 284 (742)
Q Consensus 208 ThVAGiiaG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai-~~a~~~g~~VIn~SlG~~~-~~~~ 284 (742)
|||||||||.. +..+ +.||||+|+|+.+|++++.+ ...++++.++ +++..++++|||+|||... .+..
T Consensus 117 ThVAGiIAa~~--------n~~g-~~GVAp~A~l~~~rvl~~~~~~~~~~~~~a~~~~~~~~~~~I~n~S~G~~~~~~~~ 187 (600)
T 3hjr_A 117 TSVSGIIAAVD--------NAIG-TKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASRDNRVFNQSYGMSVVDPRS 187 (600)
T ss_dssp HHHHHHHHCCS--------SSSS-CCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTSSHHHHTCSEEEECCCCCCSSCCC
T ss_pred HHHHHHHhEeC--------CCCC-cEEeCCCCEEEEEEeecCCCCccHHHHHHHhhhhhhhcCCCEEecccCccccCCcc
Confidence 99999999862 2222 37999999999999998776 6677777766 6677889999999999753 2222
Q ss_pred CCHHH-----HHHHH--hhcCCcEEEEecCCCCCCCCCCCCCCCceEEecccCCcceeEEEEEeCCCeeEeeeeccCCCC
Q 048043 285 EDPLA-----IGSFS--AIQKEIFVSCSAGNEGPNPSTSSNEAPWILSVGASTTDRSIVASVELGNQAVYDGEALFQPKD 357 (742)
Q Consensus 285 ~~~~~-----~a~~~--a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVga~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 357 (742)
.+... .++.. ...+|+++|+||||.+....... +.+.+ .+++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~g~~~v~AaGNg~~~~~~~~------~~~~~------------~g~~------------- 236 (600)
T 3hjr_A 188 ANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGG------YVLNR------------TGNG------------- 236 (600)
T ss_dssp SCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETT------EEEEE------------ESSC-------------
T ss_pred CCcchhhhHHHHHHHhhhccCCcEEEEeccCccccccccc------ccccc------------CCCC-------------
Confidence 22221 11111 23689999999999764311000 00000 0000
Q ss_pred CCCCceeEEecCCCCCCCCCCcCCCCCCCCccceEEEeecCCcchhhhhHHHhhcCCeEEEEeccCCCCccccCCCcccc
Q 048043 358 FPSKQFPLIYPGANGNVSSAQCSPGSLSSNIRGKLVLCERGGGERTKKGQVVKDAGGIGMILMNDKLNGYSTLADPHLLP 437 (742)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~g~iv~~~~g~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~p 437 (742)
.......|.-... .....
T Consensus 237 --------------~~~~~~~~~~d~~-~~~~~----------------------------------------------- 254 (600)
T 3hjr_A 237 --------------PKLPFENSNLDPS-NSNFW----------------------------------------------- 254 (600)
T ss_dssp --------------CCCCSSBTTSSGG-GGSSS-----------------------------------------------
T ss_pred --------------CCCCcccccccCc-cccCc-----------------------------------------------
Confidence 0000000100000 00000
Q ss_pred EEEEehhhHHHHHHHHhcCCCCeEEEEeceeEecccCCCccccccCCCCCCCCCCCcccceEecCCcE--------Eecc
Q 048043 438 AVHVSYAAGESIKAYINSTSSPNATIVFKGTVIGKKSTPELASFSSRGPSIASPGILKPDIIGPGVNI--------LAAW 509 (742)
Q Consensus 438 ~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I--------~sa~ 509 (742)
.|+ +......+.++.||++|+.. +++|||..+ .+..
T Consensus 255 ------------------------~Is----VgA~~~~g~~a~yS~~G~~v--------~~~apg~~~~~~~~~~vt~~~ 298 (600)
T 3hjr_A 255 ------------------------NLV----VSALNADGVRSSYSSVGSNI--------FLSATGGEYGTDTPAMVTTDL 298 (600)
T ss_dssp ------------------------EEE----EEEECTTSSBCTTCCBCTTC--------CEEEECCSCSSSSCCEEEECC
T ss_pred ------------------------ceE----EeeecCCCCEeecccCCcce--------eeccCCCCCCCCCcceeeecC
Confidence 000 00123456889999999987 899998763 2222
Q ss_pred CCCc-----------------cCCCCCcccceeeccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHcccccccCCCCc
Q 048043 510 PFSV-----------------ENKTNTKSTFNMVAGTSMSCPHLSGVAALLKSAHPDWSPAAIKSAIMTTADIVSLDGKP 572 (742)
Q Consensus 510 ~~~~-----------------~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~~~~g~~ 572 (742)
++.. .........|..++|||||||||||++|||+|+||+|+++|||++|++||++++....|
T Consensus 299 pG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sGTSmAaP~VAGvaALll~a~P~lt~~~v~~~L~~TA~~~d~~~~p 378 (600)
T 3hjr_A 299 PGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSATPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAKHQP 378 (600)
T ss_dssp SSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHCBCCSTTCCC
T ss_pred CCccccccccCCccccccccccccCCCCCceeccccccccchhHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCCCCCc
Confidence 2211 01112235688999999999999999999999999999999999999999999877655
Q ss_pred ccc--------------------CCCCCCCCCcccccccCcCCcCCCC
Q 048043 573 IVD--------------------QRLLPADMFAVGAGHVNPSSANDPG 600 (742)
Q Consensus 573 ~~~--------------------~~~~~~~~~~~G~G~vd~~~Al~~~ 600 (742)
... +.........||||+||+.+|++.+
T Consensus 379 ~~~~~~~~~~~~~~~~~~~~w~~N~aG~~~s~~yGfG~vDA~~aV~~A 426 (600)
T 3hjr_A 379 VMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPTYGFGLIDVNKALELA 426 (600)
T ss_dssp EEEEEECTTSCEEEEEEECCSEECTTSCEEBTTTBTCBCCHHHHHHHH
T ss_pred ccccccccccccccccccCCcccccCCceEccccCCceecHHHHHHHh
Confidence 221 1111122457999999999998743
No 35
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A
Probab=99.91 E-value=2e-25 Score=252.63 Aligned_cols=96 Identities=21% Similarity=0.329 Sum_probs=77.3
Q ss_pred eeeecCcceEEEEEEeccCCCCHHHHHHHHHHhhh---CCCcEEEEccCCCCCCC---CCCHHHHHHHHhhcCCcEEEEe
Q 048043 232 AVGIAPLAHLAIYKVCDFDGCSESRVYAAMDTAID---DGVDVLSLSLGAASVPF---FEDPLAIGSFSAIQKEIFVSCS 305 (742)
Q Consensus 232 ~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~---~g~~VIn~SlG~~~~~~---~~~~~~~a~~~a~~~Gi~vV~A 305 (742)
+.||||+|+|+.|++. ...++++++|+||++ ++++|||||||...... +...+..++.+|..+|++||+|
T Consensus 274 ~~gvAp~a~i~~~~~~----~~~~~~~~ai~~av~~~~~~~~VIS~S~G~~e~~~~~~~~~~~~~~~~~a~~~Gi~vv~A 349 (552)
T 1t1e_A 274 AGALAPGAKIAVYFAP----NTDAGFLNAITTAVHDPTHKPSIVSISWGGPEDSWAPASIAAMNRAFLDAAALGVTVLAA 349 (552)
T ss_dssp HHHHCTTSEEEEEECC----SSHHHHHHHHHHHHTCTTTCCSEEEECEEEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred hhccCCCCeEEEEEcC----CCCchHHHHHHHHHhcccCCCCEEEecccCCcccCCHHHHHHHHHHHHHHHhCCeEEEEe
Confidence 4799999999999974 245789999999998 79999999999864221 1235666677888999999999
Q ss_pred cCCCCCCC--------CCCCCCCCceEEecccCC
Q 048043 306 AGNEGPNP--------STSSNEAPWILSVGASTT 331 (742)
Q Consensus 306 AGN~g~~~--------~~~~~~~p~vitVga~~~ 331 (742)
|||+|... ..+++.+|+|++||+++.
T Consensus 350 sGd~G~~~~~~~~~~~~~~PAs~P~V~aVGat~~ 383 (552)
T 1t1e_A 350 AGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRL 383 (552)
T ss_dssp CCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEE
T ss_pred cCCCCCCCCCCCCcccccCcccCCCEEEEecccc
Confidence 99999653 345688999999999753
No 36
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A*
Probab=99.86 E-value=4.3e-22 Score=214.77 Aligned_cols=99 Identities=17% Similarity=0.188 Sum_probs=80.1
Q ss_pred eeecCcceEEEEEEeccCCCCHHHHHHHHHHhhh-CCCcEEEEccCCCCC----CCCCCHHHHHHHHhhcCCcEEEEecC
Q 048043 233 VGIAPLAHLAIYKVCDFDGCSESRVYAAMDTAID-DGVDVLSLSLGAASV----PFFEDPLAIGSFSAIQKEIFVSCSAG 307 (742)
Q Consensus 233 ~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~-~g~~VIn~SlG~~~~----~~~~~~~~~a~~~a~~~Gi~vV~AAG 307 (742)
..+||+++++.|++.+..+++.++++++|+||++ ++++|||||||.... ..+.+.+..++.+|..+|++||+|||
T Consensus 90 g~~aP~a~~~~~~~~~~~~~~~~~~~~ai~~av~~~~~~ViS~S~G~~e~~~~~~~~~~~~~~~~~~a~~~Gitvv~AsG 169 (372)
T 1ga6_A 90 GSAGGAVQQLLFYMADQSASGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAAQGQTFSVSSG 169 (372)
T ss_dssp HHTTSCEEEEEEEEECTTSSTTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred hhcCCCCcEEEEEeCCCCCcccHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCchHHHHHHHHHHHHHHHhCCcEEEEEEC
Confidence 3578999999999987655677899999999998 899999999998631 12234567777788899999999999
Q ss_pred CCCCCCC-------------CCCCCCCceEEecccCC
Q 048043 308 NEGPNPS-------------TSSNEAPWILSVGASTT 331 (742)
Q Consensus 308 N~g~~~~-------------~~~~~~p~vitVga~~~ 331 (742)
|+|...+ .+++..|+|++||+++.
T Consensus 170 d~G~~~~~~~g~~~~~~~~~~~PAs~P~V~aVGat~~ 206 (372)
T 1ga6_A 170 DEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTL 206 (372)
T ss_dssp SBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEE
T ss_pred CCCCccccccCccCCccCCcCCCCCCCCeEEEEeeec
Confidence 9997642 45678999999999754
No 37
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A*
Probab=99.01 E-value=1.1e-10 Score=131.07 Aligned_cols=97 Identities=11% Similarity=0.122 Sum_probs=62.4
Q ss_pred eecCcceEEEEEEeccCCCCHHHHHHHHHHhh--hCCCcEEEEccCCCCCC---CCCCHHHHHHHHhhcCCcEEEEecCC
Q 048043 234 GIAPLAHLAIYKVCDFDGCSESRVYAAMDTAI--DDGVDVLSLSLGAASVP---FFEDPLAIGSFSAIQKEIFVSCSAGN 308 (742)
Q Consensus 234 GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~--~~g~~VIn~SlG~~~~~---~~~~~~~~a~~~a~~~Gi~vV~AAGN 308 (742)
+++++..++.|-.... ....+.++..+++.. .+-++||++|||..... .+...+...+.++..+|+.|++|+||
T Consensus 263 a~~~~i~~~~~~~~g~-~~~~e~~l~~l~~l~~~~~~~~ViS~S~G~~e~~~~~~y~~~~~~~~~~~~~~Gitv~~ASGD 341 (544)
T 3edy_A 263 SAGANISTWVYSSPGR-HEGQEPFLQWLMLLSNESALPHVHTVSYGDDEDSLSSAYIQRVNTELMKAAARGLTLLFASGD 341 (544)
T ss_dssp HHSTTSEEEEECCCSC-CTTCCHHHHHHHHHTTCSSCCSEEEEECCEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEECCS
T ss_pred ccCCCceEEEEecCCc-ccccccHHHHHHHHhccCCCCcEEEecCCCcccccCHHHHHHHHHHHHHHHhCCeEEEEecCC
Confidence 4555555555433211 112234455444433 34688999999987422 22234555666788899999999999
Q ss_pred CCCCC----------CCCCCCCCceEEecccCC
Q 048043 309 EGPNP----------STSSNEAPWILSVGASTT 331 (742)
Q Consensus 309 ~g~~~----------~~~~~~~p~vitVga~~~ 331 (742)
+|... ..+++..|||++||+++.
T Consensus 342 ~G~~~~~~~~~~~~~~~~Pas~P~VtaVGgT~l 374 (544)
T 3edy_A 342 SGAGCWSVSGRHQFRPTFPASSPYVTTVGGTSF 374 (544)
T ss_dssp STTBCEEETTEEECCCEETTTCTTSEEEEEEEE
T ss_pred CCccccCCCCCccccCCCcCCCCcEEEEeeeec
Confidence 99642 245688999999999753
No 38
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P
Probab=98.97 E-value=4.2e-10 Score=99.76 Aligned_cols=81 Identities=9% Similarity=0.100 Sum_probs=68.1
Q ss_pred CCCCCceEEEEECCCCCCCCcchhccchHHHHHhhcccccccCCCCCCceEEEEcceeeEEEEEcCHHHHHHhhcCCCeE
Q 048043 26 DTDSLETYIVYVRKPDQDQATTSIKLDLDSWYHSFLPVSISSSINNQPRMLYCYKNVITGFAAKLTAEQAKAMETKEGFI 105 (742)
Q Consensus 26 ~~~~~~~yIV~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~i~~L~~~p~V~ 105 (742)
....+++|||+|++.. .+.. ...|.+|+.+++++. ..+.++.+.|.+.|+||+++++++++++|+++|+|.
T Consensus 33 ~~~ip~~YIV~lk~~~---~~~~-~~~h~~~l~s~~~~~-----~~~~~i~~sY~~~~~GFaa~Lt~~~~~~L~~~P~V~ 103 (114)
T 2w2n_P 33 PWRLPGTYVVVLKEET---HLSQ-SERTARRLQAQAARR-----GYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVD 103 (114)
T ss_dssp GGEEEEEEEEEECTTC---CHHH-HHHHHHHHHHHHHHT-----TCCCEEEEEECSSSSEEEEECCGGGHHHHHTSTTEE
T ss_pred ccCCCCcEEEEECCCC---CHHH-HHHHHHHHHHHhhhc-----ccCCceEEEecccceEEEEEcCHHHHHHHHcCCCcc
Confidence 3446899999999877 4444 557888988887652 456799999999999999999999999999999999
Q ss_pred EEEeceeecc
Q 048043 106 SAHVEKTLQL 115 (742)
Q Consensus 106 ~V~~~~~~~~ 115 (742)
+|++++.++.
T Consensus 104 ~VE~D~~v~~ 113 (114)
T 2w2n_P 104 YIEEDSSVFA 113 (114)
T ss_dssp EEEEEEEEEE
T ss_pred EEEeCceEec
Confidence 9999998764
No 39
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=98.84 E-value=7.6e-09 Score=85.75 Aligned_cols=74 Identities=11% Similarity=0.220 Sum_probs=57.3
Q ss_pred CCCceEEEEECCCCCCCCcchhccchHHHHHhhcccccccCCCCCCceEEEEcceeeEEEEEcCHHHHHHhhcCCCeEEE
Q 048043 28 DSLETYIVYVRKPDQDQATTSIKLDLDSWYHSFLPVSISSSINNQPRMLYCYKNVITGFAAKLTAEQAKAMETKEGFISA 107 (742)
Q Consensus 28 ~~~~~yIV~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~i~~L~~~p~V~~V 107 (742)
..+++|||+|+++. .... . .+++++ ..+.++.++|.+ |+||+++++++++++|+++|+|.+|
T Consensus 6 ~i~~~YIV~~k~~~---~~~~----~---~~~~~~-------~~g~~i~~~y~~-~~Gfaa~l~~~~~~~L~~~p~V~~V 67 (80)
T 3cnq_P 6 NGEKKYIVGFKQGF---KSCA----K---KEDVIS-------EKGGKLQKCFKY-VDAASATLNEKAVEELKKDPSVAYV 67 (80)
T ss_dssp --CCEEEEEECTTC---CSHH----H---HHHHHH-------TTTCEEEEECSS-SSEEEEECCHHHHHHHHTCTTEEEE
T ss_pred cCCCCEEEEECCCC---ChHH----H---HHHHHH-------HcCCcceEEEcc-cEEEEEEcCHHHHHHHHhCCCccEE
Confidence 45899999999977 3221 1 112222 235689999998 9999999999999999999999999
Q ss_pred EeceeeccccCC
Q 048043 108 HVEKTLQLHTTH 119 (742)
Q Consensus 108 ~~~~~~~~~~~~ 119 (742)
|++..++++++.
T Consensus 68 e~D~~v~~~tt~ 79 (80)
T 3cnq_P 68 EEDKLYRALSAT 79 (80)
T ss_dssp EECCEEEECCC-
T ss_pred EeCcEEEEeeec
Confidence 999999887654
No 40
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P
Probab=98.73 E-value=1.2e-08 Score=91.38 Aligned_cols=80 Identities=9% Similarity=0.104 Sum_probs=62.2
Q ss_pred CCCCceEEEEECCCCCCCCcchhccchHHHHHhhcccccccCCCCCCceEEEEcceeeEEEEEcCHHHHHHhhcCCCeEE
Q 048043 27 TDSLETYIVYVRKPDQDQATTSIKLDLDSWYHSFLPVSISSSINNQPRMLYCYKNVITGFAAKLTAEQAKAMETKEGFIS 106 (742)
Q Consensus 27 ~~~~~~yIV~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~i~~L~~~p~V~~ 106 (742)
...+++|||+||++. .+.. ...+.+++.+.+++. ..+.++.++|++.|+||+++++++++++|+++|+|.+
T Consensus 44 ~~Ip~~YIV~~K~~~---~~~~-~~~~~~~l~~~~~~r-----~~g~~i~~~Y~~~~~GFaa~l~~~~~~~L~~~p~V~~ 114 (124)
T 2qtw_A 44 WRLPGTYVVVLKEET---HLSQ-SERTARRLQAQAARR-----GYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDY 114 (124)
T ss_dssp GEEEEEEEEEECTTC---CHHH-HHHHHHHHHHHHHHT-----TCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEE
T ss_pred cCCCCCEEEEECCCC---CHHH-HHHHHHHHHHHHhhc-----ccCCceEEEecccceEEEEEcCHHHHHHHHcCCCCcE
Confidence 446899999999987 4333 334444544433321 2467899999999999999999999999999999999
Q ss_pred EEeceeecc
Q 048043 107 AHVEKTLQL 115 (742)
Q Consensus 107 V~~~~~~~~ 115 (742)
|+++..++.
T Consensus 115 VE~D~~v~a 123 (124)
T 2qtw_A 115 IEEDSSVFA 123 (124)
T ss_dssp EEEEEEEEE
T ss_pred EEeCceEec
Confidence 999998754
No 41
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A
Probab=98.49 E-value=2.5e-07 Score=75.56 Aligned_cols=71 Identities=13% Similarity=0.115 Sum_probs=54.1
Q ss_pred CceEEEEECCCCCCCCcchhccchHHHHHhhcccccccCCCCCCceEEEE-cceeeEEEEEcCHHHHHHhhcC--CCeEE
Q 048043 30 LETYIVYVRKPDQDQATTSIKLDLDSWYHSFLPVSISSSINNQPRMLYCY-KNVITGFAAKLTAEQAKAMETK--EGFIS 106 (742)
Q Consensus 30 ~~~yIV~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y-~~~~~g~s~~~~~~~i~~L~~~--p~V~~ 106 (742)
.+.|||.|+++. .... ...+.+++.. . +.++.+.| ...|+||+++++++.+++|+++ |.|.+
T Consensus 2 ~~sYIV~lk~~~---~~~~-~~~~~~~~~~----~-------gg~i~~~y~~~~~~Gfa~~~~~~~l~~l~~~~~p~V~~ 66 (76)
T 1v5i_B 2 AGKFIVIFKNDV---SEDK-IRETKDEVIA----E-------GGTITNEYNMPGMKGFAGELTPQSLTKFQGLQGDLIDS 66 (76)
T ss_dssp CEEEEEEECTTC---CHHH-HHHHHHHHHH----H-------TCCCCEEEEETTEEEEEEEECHHHHHHHHHTBTTTEEE
T ss_pred CceEEEEECCCC---CHHH-HHHHHHHHHh----h-------CCceEEEEEcCceeEEEEEcCHHHHHHHHhcCCCCCcE
Confidence 378999999977 3222 2233333332 1 34788999 4799999999999999999999 88999
Q ss_pred EEeceeecc
Q 048043 107 AHVEKTLQL 115 (742)
Q Consensus 107 V~~~~~~~~ 115 (742)
||++..++.
T Consensus 67 VE~D~~v~~ 75 (76)
T 1v5i_B 67 IEEDHVAHA 75 (76)
T ss_dssp EEECCEEEC
T ss_pred EcCCcEEeC
Confidence 999988753
No 42
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=98.48 E-value=7.7e-07 Score=85.56 Aligned_cols=92 Identities=17% Similarity=0.166 Sum_probs=72.6
Q ss_pred CCCCcCCCCCC-CC-------ccceEEEeecCC-cchhhhhHHHhhcCCeEEEEeccCCCCccc----cCCCccccEEEE
Q 048043 375 SSAQCSPGSLS-SN-------IRGKLVLCERGG-GERTKKGQVVKDAGGIGMILMNDKLNGYST----LADPHLLPAVHV 441 (742)
Q Consensus 375 ~~~~c~~~~~~-~~-------~~g~iv~~~~g~-~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~----~~~~~~~p~~~i 441 (742)
....|.+.... .. .+++|+|++||. |.|.+|..+++++||.++|+||+...+... ......||+++|
T Consensus 82 ~~~GC~~~~~~~~~~~~~~~~~~gkIaLV~RG~~CsF~~Kv~nAq~aGA~avIIyNn~~~g~~~~~m~~~~~~~IPsv~I 161 (194)
T 3icu_A 82 ALNACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAIMI 161 (194)
T ss_dssp CTTCCSTTCCBCCCBCTTSSCBCCEEEEEESCTTCCHHHHHHHHHHTTCSEEEEECCTTCTTCCCCCCCTTCCSSEEEEE
T ss_pred CcCCCCCCccccCCcccccccCCCeEEEEECCCCcCHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecCCCCCceeEEEE
Confidence 45789887654 22 478999999999 999999999999999999999985332211 112346999999
Q ss_pred ehhhHHHHHHHHhcCCCCeEEEEec
Q 048043 442 SYAAGESIKAYINSTSSPNATIVFK 466 (742)
Q Consensus 442 ~~~~g~~l~~~~~~~~~~~~~i~~~ 466 (742)
+..+|+.|++++.++...+++|.+.
T Consensus 162 s~~~G~~L~~~L~~G~~Vtvti~vg 186 (194)
T 3icu_A 162 GNLKGTKILQSIQRGIQVTMVIEVG 186 (194)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred CHHHHHHHHHHHHCCCeEEEEEECC
Confidence 9999999999999887766666553
No 43
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=97.43 E-value=0.00023 Score=55.84 Aligned_cols=44 Identities=11% Similarity=0.243 Sum_probs=40.2
Q ss_pred CCCCceEEEEcceeeEEEEEcCHHHHHHhhcCCCeEEEEeceeec
Q 048043 70 NNQPRMLYCYKNVITGFAAKLTAEQAKAMETKEGFISAHVEKTLQ 114 (742)
Q Consensus 70 ~~~~~~~~~y~~~~~g~s~~~~~~~i~~L~~~p~V~~V~~~~~~~ 114 (742)
..+.++.++|. .+++++++++++.++.|+++|+|++|+++...+
T Consensus 20 ~~gG~i~~~~~-~I~a~~~~lp~~~~~~L~~~p~V~yVE~D~~v~ 63 (65)
T 2z30_B 20 GIGGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAV 63 (65)
T ss_dssp GGTCEEEEECS-SSSEEEEEECGGGHHHHHTSTTEEEEEECCEEE
T ss_pred HCCCEEEEEec-CCcEEEEEeCHHHHHHHhcCCCceEEecCcEEE
Confidence 45789999998 699999999999999999999999999998764
No 44
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.49 E-value=0.01 Score=52.79 Aligned_cols=73 Identities=16% Similarity=0.139 Sum_probs=57.1
Q ss_pred CccEEEEEEEEeeCCCCceEEEEEECCCCcEEEEEcCeeEecCCCcEEEEEEEEEEccCCCCceEEEEEEEE-cCceEEE
Q 048043 656 STSQTYNRTVTNVGQAESSYTHKIVAPEGVTVTVEPENISFTKKNQKAIYSITFTRSQKTSALFAQGYLSWV-STKHTVR 734 (742)
Q Consensus 656 ~~~~~~~~tv~n~~~~~~~y~~~~~~p~~~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~G~i~~~-~~~~~v~ 734 (742)
+...+.++.|+|.|+.+..|+..... ..+++|+..++.+ |+++.++|+|.+... ..+.+.+.+. +++..+.
T Consensus 40 ~~~~~~~~~l~N~g~~~~~f~~~~~~----~F~i~P~~g~L~p-g~~~~i~V~F~P~~~---g~~~~~l~v~~~~g~~~~ 111 (122)
T 2ys4_A 40 KYSTQKILLVRNIGNKNAVFHIKTCR----PFSIEPAIGTLNV-GESMQLEVEFEPQSV---GDHSGRLIVCYDTGEKVF 111 (122)
T ss_dssp SSCEEEEEEEECCSSSCEEEEEECCT----TEEEESSEEEECT-TCEEEEEEEECCSSS---BCCCCBCEEEESSSCEEC
T ss_pred CCeEEEEEEEEECCCCCEEEEEecCC----CeEEECCcCEECC-CCEEEEEEEEEcCCC---ccEEEEEEEEECCCCEEE
Confidence 45788889999999988888776532 3678999999998 999999999998865 4567777665 5555555
Q ss_pred Ee
Q 048043 735 SP 736 (742)
Q Consensus 735 ~p 736 (742)
++
T Consensus 112 v~ 113 (122)
T 2ys4_A 112 VS 113 (122)
T ss_dssp CE
T ss_pred EE
Confidence 44
No 45
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=95.60 E-value=0.043 Score=59.83 Aligned_cols=69 Identities=22% Similarity=0.386 Sum_probs=57.4
Q ss_pred CCccceEEEeecCCcchhhhhHHHhhcCCeEEEEeccCCCCccc-c--CCCccccEEEEehhhHHHHHHHHh
Q 048043 386 SNIRGKLVLCERGGGERTKKGQVVKDAGGIGMILMNDKLNGYST-L--ADPHLLPAVHVSYAAGESIKAYIN 454 (742)
Q Consensus 386 ~~~~g~iv~~~~g~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~-~--~~~~~~p~~~i~~~~g~~l~~~~~ 454 (742)
.+++|||+++.++.|.+.+|..+++.+||.|+|++++....... . .....+|...++..+++.|+.++.
T Consensus 111 ~dv~GkIvlv~~g~~~~~~k~~~A~~~GA~gvIi~~~~~~~~~g~~~~~~~~~IP~~~Is~~~a~~L~~~l~ 182 (421)
T 2ek8_A 111 KDLNGKIALIQRGNISFADKVRNAAKQGAKAVIIYNNTDGKLNGTLGGSDASFVAAVGITKQEGDALAANLR 182 (421)
T ss_dssp SCCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSSSCCCCBCSSCCTTCCEEEEECHHHHHHHHHHHH
T ss_pred CCcCceEEEEeCCCCCHHHHHHHHHHCCCeEEEEEeCCCcccccccCCCCCCCccEEEeCHHHHHHHHHHhh
Confidence 47999999999999999999999999999999999986322111 1 134578999999999999999984
No 46
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=94.69 E-value=0.14 Score=56.16 Aligned_cols=82 Identities=11% Similarity=0.207 Sum_probs=60.3
Q ss_pred CCccceEEEeecCCcc---------hhhh----hHHHhhcCCeEEEEeccCCCCc-------cccC-CCccccEEEEehh
Q 048043 386 SNIRGKLVLCERGGGE---------RTKK----GQVVKDAGGIGMILMNDKLNGY-------STLA-DPHLLPAVHVSYA 444 (742)
Q Consensus 386 ~~~~g~iv~~~~g~~~---------~~~~----~~~~~~~g~~~~i~~~~~~~~~-------~~~~-~~~~~p~~~i~~~ 444 (742)
.+++|||||+.++.|. +..| ..++.++||+++|++++..... .... ....+|++.|+.+
T Consensus 125 ~dvkGKIVlv~~~~~~~~~~~~y~~~~~kr~~~a~~A~~aGA~avIi~~~~~~~~~~~~tg~~~~~~~~~~IP~~~Is~~ 204 (444)
T 3iib_A 125 GSLNDKIAFIDAKTERHRDGKGYGQTASGRSRGAVAAAEKGAVGIIIRSIGTDHDRMAHTGMMRYEEGVTAIPAAAISNP 204 (444)
T ss_dssp TTTTTCEEEECCCCCCCTTCHHHHHHHHHHHHHHHHHHHTTCSEEEEECSCSCCSSCCCCCBCCCCTTSCCCCEEEECHH
T ss_pred cccCccEEEEeCCCCCCcccccccchhhhhhhHHHHHHHCCCeEEEEEccCCcccccccCCccccCCCCCCCCeEEecHH
Confidence 6899999999998884 3334 3568899999999998744321 1111 2357999999999
Q ss_pred hHHHHHHHHhcCCCCeEEEEece
Q 048043 445 AGESIKAYINSTSSPNATIVFKG 467 (742)
Q Consensus 445 ~g~~l~~~~~~~~~~~~~i~~~~ 467 (742)
+++.|...+..+...++++....
T Consensus 205 da~~L~~~l~~g~~~~v~l~~~~ 227 (444)
T 3iib_A 205 DADLINAMLKRDKEVVISLELGS 227 (444)
T ss_dssp HHHHHHHHHTTTCCCEEEEEEEE
T ss_pred HHHHHHHHHhCCCCeEEEEEEee
Confidence 99999999987765556555433
No 47
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=94.19 E-value=0.085 Score=60.30 Aligned_cols=68 Identities=18% Similarity=0.210 Sum_probs=54.7
Q ss_pred CccceEEEeecCCcchhhhhHHHhhcCCeEEEEeccCCCCcc-------------ccC---------------------C
Q 048043 387 NIRGKLVLCERGGGERTKKGQVVKDAGGIGMILMNDKLNGYS-------------TLA---------------------D 432 (742)
Q Consensus 387 ~~~g~iv~~~~g~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~-------------~~~---------------------~ 432 (742)
+++|||+|+.+|.|.+.+|..++..+||+|+|++++...... ... .
T Consensus 129 dv~GkIvlv~~g~~~~~~K~~~A~~~GA~gvii~~~~~~~~~~~~~~~~~G~~~~~~Gdp~tpg~ps~~~~~~~~~~~~~ 208 (640)
T 3kas_A 129 PVNGSIVIVRAGKITFAEKVANAESLNAIGVLIYMDQTKFPIVNAELSFFGHAHLGTGDPYTPGFPSFNHTQFPPSRSSG 208 (640)
T ss_dssp CCTTSEEEEESCSSCHHHHHHHHHTTTCSEEEEECCTTTCCCSCTTCCCCEECCSSSSCSCCCSSCC---CCCCCCSSCC
T ss_pred ccCCcEEEEecCCCCHHHHHHHHHHCCCeEEEEEeccccccccccccccccccccCCCCCCCCCcccccccccccccccC
Confidence 799999999999999999999999999999999987532100 000 0
Q ss_pred CccccEEEEehhhHHHHHHHHh
Q 048043 433 PHLLPAVHVSYAAGESIKAYIN 454 (742)
Q Consensus 433 ~~~~p~~~i~~~~g~~l~~~~~ 454 (742)
...+|+..|+..+++.|+..+.
T Consensus 209 ~p~IP~~~Is~~~a~~Ll~~l~ 230 (640)
T 3kas_A 209 LPNIPVQTISRAAAEKLFGNME 230 (640)
T ss_dssp CCSSCEEECCHHHHHHHHTTEE
T ss_pred CCCCCEEecCHHHHHHHHHHcc
Confidence 2358999999999999988764
No 48
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=92.90 E-value=0.11 Score=59.92 Aligned_cols=70 Identities=27% Similarity=0.364 Sum_probs=55.6
Q ss_pred CCccceEEEeecCCcchhhhhHHHhhcCCeEEEEeccCCC----C------------------cc----ccCC-------
Q 048043 386 SNIRGKLVLCERGGGERTKKGQVVKDAGGIGMILMNDKLN----G------------------YS----TLAD------- 432 (742)
Q Consensus 386 ~~~~g~iv~~~~g~~~~~~~~~~~~~~g~~~~i~~~~~~~----~------------------~~----~~~~------- 432 (742)
.+++|||+|+++|.|.+.+|..+++.+||+|+|++++..+ + .. ...+
T Consensus 151 ~~v~GkIvlv~~G~~~~~~Kv~~A~~~GA~gviiy~dp~d~~~~g~~~yP~~~~~p~~~vqrGsv~~~~~~GDp~TPG~p 230 (707)
T 3fed_A 151 INCTGKIVIARYGKIFRGNKVKNAMLAGAIGIILYSDPADYFAPEVQPYPKGWNLPGTAAQRGNVLNLNGAGDPLTPGYP 230 (707)
T ss_dssp CCCTTCEEEEECCSSCHHHHHHHHHHTTCSEEEEECCHHHHCCTTCCBTTTSSBCCTTCCCCCCCCCCTTCCSTTCTTSC
T ss_pred CCCCCeEEEEECCCCCHhHHHHHHHHCCCEEEEEEcCchhccccccccCCCCccCCCccccccceecccCCCCCCCCCCc
Confidence 3689999999999999999999999999999999986320 0 00 0011
Q ss_pred ---------------CccccEEEEehhhHHHHHHHHhc
Q 048043 433 ---------------PHLLPAVHVSYAAGESIKAYINS 455 (742)
Q Consensus 433 ---------------~~~~p~~~i~~~~g~~l~~~~~~ 455 (742)
...||+..|+..+++.|+..+..
T Consensus 231 s~~~~~r~~~~~~~~~p~IP~~pIS~~da~~Ll~~l~g 268 (707)
T 3fed_A 231 AKEYTFRLDVEEGVGIPRIPVHPIGYNDAEILLRYLGG 268 (707)
T ss_dssp CCTTCCCCCGGGCTTCCSSCEEEECHHHHHHHHHTBCB
T ss_pred ccCCCcccChhhccCCCCCCeEecCHHHHHHHHHHhcC
Confidence 24689999999999999988753
No 49
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=89.76 E-value=2 Score=38.67 Aligned_cols=84 Identities=14% Similarity=0.031 Sum_probs=61.7
Q ss_pred ccEEEEEEEEeeCCCCceEEEEEECC----CCcEEEEEcCeeEecCCCcEEEEEEEEEEccC-----CC-CceEEEEEEE
Q 048043 657 TSQTYNRTVTNVGQAESSYTHKIVAP----EGVTVTVEPENISFTKKNQKAIYSITFTRSQK-----TS-ALFAQGYLSW 726 (742)
Q Consensus 657 ~~~~~~~tv~n~~~~~~~y~~~~~~p----~~~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~-----~~-~~~~~G~i~~ 726 (742)
..++-+++|+|.|.-+.+|+...... ..--.+++|..-++.| |++.+++|++..... .. ..-+.--+++
T Consensus 43 ~~~~~~l~I~Ntg~vpa~F~f~~~~~~~~~~~~wl~v~P~~G~L~P-ge~~~I~v~~~v~~~~~~~ln~g~~~l~diLvL 121 (140)
T 3qbt_B 43 QLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYLEP-NETVDISLDVYVSKDSVTILNSGEDKIEDILVL 121 (140)
T ss_dssp CCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEECT-TCEEEEEEEECBCHHHHHHHHHSSSCSCEEEEE
T ss_pred eeeeeEEEEEcCCccceEEEEecCCCchhhhhHhhhcCCcccccCC-CCeeEEEEEEEEccCcccccccchhhhheeEEE
Confidence 36777899999999999999874321 1123667899999999 999999999986431 11 1344566777
Q ss_pred E-cCceEEEEeEEEEe
Q 048043 727 V-STKHTVRSPIAVRF 741 (742)
Q Consensus 727 ~-~~~~~v~~p~~v~~ 741 (742)
. .++....+|+.-.|
T Consensus 122 ~Ve~G~d~fI~v~g~~ 137 (140)
T 3qbt_B 122 HLDRGKDYFLTISGNY 137 (140)
T ss_dssp EETTSCEEEEEEEEEE
T ss_pred EeecCCcEEEEEeccc
Confidence 6 78888899987654
No 50
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=88.13 E-value=0.21 Score=60.88 Aligned_cols=24 Identities=25% Similarity=0.565 Sum_probs=22.9
Q ss_pred CCCCCccEEEEEcccCCCCCCCCC
Q 048043 136 SNLGKGVIIGVMDTGITPGHPSFS 159 (742)
Q Consensus 136 ~~~G~gV~VaVIDtGid~~Hp~f~ 159 (742)
.+.|+||+|||+|||||+.+|.|+
T Consensus 32 ~ydGrgv~iai~DtGVDP~a~glq 55 (1354)
T 3lxu_X 32 EYDGRDVTIAIFDSGVDPRATGLE 55 (1354)
T ss_dssp TCSSTTCEEEEEESCCCTTSTTSS
T ss_pred CCCCCccEEEEEeCCCCCCCCcce
Confidence 589999999999999999999997
No 51
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=87.44 E-value=2.2 Score=37.09 Aligned_cols=55 Identities=15% Similarity=0.175 Sum_probs=46.0
Q ss_pred cEEEEEEEEeeCCCCceEEEEEECCCCcEEEEEcCeeEecCCCcEEEEEEEEEEccC
Q 048043 658 SQTYNRTVTNVGQAESSYTHKIVAPEGVTVTVEPENISFTKKNQKAIYSITFTRSQK 714 (742)
Q Consensus 658 ~~~~~~tv~n~~~~~~~y~~~~~~p~~~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~ 714 (742)
...+++.+.|..+.+.+|.+++...+++++. .+..+++.+ |+.+++.|.+..+..
T Consensus 32 ~N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~-g~~~i~v~~-g~~~~~~v~v~~~~~ 86 (118)
T 2r39_A 32 ENTYTLKVINKTQQVQEYNLDVKGLNDVSWY-GKQTIQVEP-GEVLNLPMSLGADPD 86 (118)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEESCSSCEEE-SCCEEEECT-TCEEEEEEEEEECGG
T ss_pred EEEEEEEEEECCCCCEEEEEEEeCCcccEEe-CCCcEEECC-CCEEEEEEEEEEChH
Confidence 6788999999999999999999987776543 355688888 999999999988743
No 52
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.43 E-value=2.4 Score=36.26 Aligned_cols=68 Identities=10% Similarity=0.088 Sum_probs=50.9
Q ss_pred CccEEEEEEEEeeCCCCceEEEEEEC-CCCcEEEEEcCeeEecCCCcEEEEEEEEEEccCCCCceEEEEEEEE
Q 048043 656 STSQTYNRTVTNVGQAESSYTHKIVA-PEGVTVTVEPENISFTKKNQKAIYSITFTRSQKTSALFAQGYLSWV 727 (742)
Q Consensus 656 ~~~~~~~~tv~n~~~~~~~y~~~~~~-p~~~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~G~i~~~ 727 (742)
+...+.+++++|.|+.+..|+..... +.+...+++|..-.+.+ |++++++|+|.+... ..+.=.|.+.
T Consensus 25 g~~~~~~~~l~N~g~~p~~~~~~~~~~~~~~~f~v~p~~g~i~p-g~~~~i~V~f~~~~~---g~f~~~i~v~ 93 (112)
T 2e6j_A 25 GSAHCYEAILYNKGSIDALFNMTPPTSALGACFVFSPKEGIIEP-SGVQAIQISFSSIIL---GNFEEEFLVN 93 (112)
T ss_dssp SCCEEEEEEEEECCSSCEEEEECCCSSHHHHHCEEESSEEEECT-TBCCEEEEEECCCCC---EEEEEEECEE
T ss_pred CCEEEEEEEEEECCcceEEEEEecCCccccCcEEEECCcCEECC-CCEEEEEEEEECCCc---ceEEEEEEEE
Confidence 44688889999999999999883211 11234678999999999 999999999998654 3444556665
No 53
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=86.44 E-value=0.45 Score=52.02 Aligned_cols=31 Identities=32% Similarity=0.486 Sum_probs=26.8
Q ss_pred cCCCccccccCCCCCCCCCCCcccceEecCCcEEeccCC
Q 048043 473 KSTPELASFSSRGPSIASPGILKPDIIGPGVNILAAWPF 511 (742)
Q Consensus 473 ~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~ 511 (742)
...+.++.||++||.. ||+|||++|+++++.
T Consensus 181 ~~~~~~~~~S~~g~~v--------dv~ApG~~i~s~~~~ 211 (441)
T 1y9z_A 181 DSNLDHAAFSQYTDQV--------EISGPGEAILSTVTV 211 (441)
T ss_dssp CTTCCBCTTSCCCTTE--------EEEEECSSEEEECST
T ss_pred CCCCCCCccccCCCce--------EEEeccCCeeccccC
Confidence 4456899999999865 999999999999874
No 54
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=76.75 E-value=18 Score=35.01 Aligned_cols=67 Identities=7% Similarity=0.077 Sum_probs=49.8
Q ss_pred ccEEEEEEEEeeCCCCceEEEEEECCCCcEEEEEcCeeEecCCCcEEEEEEEEEEccCCCCceEEEEEEEE
Q 048043 657 TSQTYNRTVTNVGQAESSYTHKIVAPEGVTVTVEPENISFTKKNQKAIYSITFTRSQKTSALFAQGYLSWV 727 (742)
Q Consensus 657 ~~~~~~~tv~n~~~~~~~y~~~~~~p~~~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~G~i~~~ 727 (742)
...+.+++++|.|+.+.+++... .|+..+. .+..-++.| |++.+++|+++......-+...++|.+.
T Consensus 19 ~~~~~~~~i~N~g~~pl~i~~~~-~p~~~~~--~~~~~~I~P-G~~g~I~vt~~~~~~~~~G~~~~~i~v~ 85 (220)
T 2qsv_A 19 DEGVVRLVVNNTDESDLQVAVVS-LPSFVSL--DDRAFRLQA-REPRELNLSLAVPRNMPPGMKDEPLVLE 85 (220)
T ss_dssp CCCEEEEEEEECSSSCEEEEEEE-CCTTEEC--SCCEEEECS-SSCEEEEEEECCCTTCCSEEEEEEEEEE
T ss_pred CcceEEEEEEeCCCCceEEEecc-CCCceEe--eeCcceeCC-CCceEEEEEEcchhcccCCceeeEEEEE
Confidence 35677899999999988888654 4666554 344456677 9999999999988764335677888876
No 55
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=70.87 E-value=25 Score=36.95 Aligned_cols=84 Identities=13% Similarity=0.064 Sum_probs=60.0
Q ss_pred ccEEEEEEEEeeCCCCceEEEEEECCCCcE----EEEEcCeeEecCCCcEEEEEEEEEEccCC------CCceEEEEEEE
Q 048043 657 TSQTYNRTVTNVGQAESSYTHKIVAPEGVT----VTVEPENISFTKKNQKAIYSITFTRSQKT------SALFAQGYLSW 726 (742)
Q Consensus 657 ~~~~~~~tv~n~~~~~~~y~~~~~~p~~~~----v~v~p~~~~~~~~g~~~~~~v~~~~~~~~------~~~~~~G~i~~ 726 (742)
...+-+++|+|.|.-+.+|+..-....... .+|+|..-++.| |++.+++|++...... ...-.+--+++
T Consensus 46 ~~~~~~l~i~N~g~~pa~f~f~~~~~~~~~~~~wl~v~p~~g~l~P-ge~~~i~l~~~v~~~~~~~ln~g~~~l~diLvL 124 (366)
T 3qis_A 46 QLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYLEP-NETVDISLDVYVSKDSVTILNSGEDKIEDILVL 124 (366)
T ss_dssp CCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEECT-TCEEEEEEEECBCTTTHHHHHHTSSCSCEEEEE
T ss_pred CeEEEEEEEEecCCceEEEEEEeCCCCCCCCCCcEEEeCCccEECC-CCEEEEEEEEEECHHHHHHHhcCccccceEEEE
Confidence 367788999999999999998654322222 678999999998 9999999999876521 11234445666
Q ss_pred E-cCceEEEEeEEEEe
Q 048043 727 V-STKHTVRSPIAVRF 741 (742)
Q Consensus 727 ~-~~~~~v~~p~~v~~ 741 (742)
. .+++...+|+-..|
T Consensus 125 ~ve~G~d~FI~v~~~~ 140 (366)
T 3qis_A 125 HLDRGKDYFLTISGNY 140 (366)
T ss_dssp EETTSCEEEEEEEEEE
T ss_pred EEeCCCcEEEEecccc
Confidence 5 67777777776554
No 56
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=64.70 E-value=26 Score=29.84 Aligned_cols=50 Identities=14% Similarity=0.043 Sum_probs=42.4
Q ss_pred EEEEEEEeeCCCCceEEEEEECCCCcEEEEEcCeeEecCCCcEEEEEEEEEEc
Q 048043 660 TYNRTVTNVGQAESSYTHKIVAPEGVTVTVEPENISFTKKNQKAIYSITFTRS 712 (742)
Q Consensus 660 ~~~~tv~n~~~~~~~y~~~~~~p~~~~v~v~p~~~~~~~~g~~~~~~v~~~~~ 712 (742)
+.+.+|+|.++...-|++....|.-. .|.|..=.+.| |++.++.|+..+.
T Consensus 18 ~~~l~L~N~t~~~vaFKVKtT~p~~y--~VrP~~G~I~P-~~~~~i~I~~q~~ 67 (109)
T 1row_A 18 SSTHKLVNGGAEKIVFKIKSSNNNEY--RIAPVFGFVDP-SGSKDVVITRTAG 67 (109)
T ss_dssp EEEEEEEECSSSCEEEEEEESCSSSE--EEECSEEEECT-TEEEEEEEEECSC
T ss_pred eEEEEEEcCCCCeEEEEEEeCCCCce--EEcCCceEECC-CCeEEEEEEeCCC
Confidence 56789999999999999998888765 46798888888 9999999998874
No 57
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=62.84 E-value=30 Score=30.30 Aligned_cols=52 Identities=15% Similarity=0.259 Sum_probs=37.4
Q ss_pred CccEEEEEEEEeeCCCC-ceEEEEEECCCCcEEEEEcCeeEecCCCcEEEEEEEEEE
Q 048043 656 STSQTYNRTVTNVGQAE-SSYTHKIVAPEGVTVTVEPENISFTKKNQKAIYSITFTR 711 (742)
Q Consensus 656 ~~~~~~~~tv~n~~~~~-~~y~~~~~~p~~~~v~v~p~~~~~~~~g~~~~~~v~~~~ 711 (742)
+...+++.+|+|.|... ..|++.... .|..+.-. ...+.+ |+++++++++.+
T Consensus 32 G~~~ti~vtV~N~G~~~a~~~~V~lyv-ng~~v~t~--~v~La~-G~s~tv~f~~~~ 84 (127)
T 3idu_A 32 NKLAEYEVHVKNLGGIGVPSTKVRVYI-NGTLYKNW--TVSLGP-KEEKVLTFNWTP 84 (127)
T ss_dssp TCCEEEEEEEEECSSSCEEEEEEEEEE-TTEEEEEE--EEEECT-TCEEEEEEEECC
T ss_pred CCEEEEEEEEEECCCCccCCcEEEEEE-CCEEEeeE--EeccCC-CCeEEEEEEEEc
Confidence 45799999999999864 567777654 45444332 346777 999998888763
No 58
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=62.30 E-value=29 Score=40.00 Aligned_cols=55 Identities=15% Similarity=0.185 Sum_probs=36.5
Q ss_pred cEEEEEEEEeeCCCCceEEEEE--ECCCC-----cEEEEEcCeeEecCCCcEEEEEEEEEEcc
Q 048043 658 SQTYNRTVTNVGQAESSYTHKI--VAPEG-----VTVTVEPENISFTKKNQKAIYSITFTRSQ 713 (742)
Q Consensus 658 ~~~~~~tv~n~~~~~~~y~~~~--~~p~~-----~~v~v~p~~~~~~~~g~~~~~~v~~~~~~ 713 (742)
..+++++|+|+|+....-.+.+ ..|.+ .+.-.--+++.+.| ||+++++++|+..+
T Consensus 614 ~~~vsv~VtNtG~~~G~EVvQlYv~~~~~~~~~P~k~L~gF~kv~L~p-Ges~~V~~~l~~~~ 675 (713)
T 3zyz_A 614 VATVTVDIANSGQVTGAEVAQLYITYPSSAPRTPPKQLRGFAKLNLTP-GQSGTATFNIRRRD 675 (713)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEEEECCTTSSSCCSCEEEEEEEEEECT-TCEEEEEEEEEGGG
T ss_pred eEEEEEEEEeCCCCccceeeeeeeecCCCCCCchhHHhhhcccceeCC-CCeEEEEEEEcHHH
Confidence 5789999999998765554443 33422 11122233456777 99999999998764
No 59
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=62.22 E-value=34 Score=29.65 Aligned_cols=79 Identities=8% Similarity=0.063 Sum_probs=46.2
Q ss_pred CCccEEEEEEEEeeCCCCce--------EEEEEECCCCcEEEE---------EcCeeEecCCCcEEEEEEEEEEccCCCC
Q 048043 655 GSTSQTYNRTVTNVGQAESS--------YTHKIVAPEGVTVTV---------EPENISFTKKNQKAIYSITFTRSQKTSA 717 (742)
Q Consensus 655 ~~~~~~~~~tv~n~~~~~~~--------y~~~~~~p~~~~v~v---------~p~~~~~~~~g~~~~~~v~~~~~~~~~~ 717 (742)
.++...++++|+|.++.+.+ |.+.+....|-.|.- -....+|.| |++++|+.++.....+..
T Consensus 16 ~g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~p-GE~~~f~~~w~~~~~pG~ 94 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLES-GETYDFSDVWKEVPEPGT 94 (120)
T ss_dssp CSSCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECT-TCEEEEEEEESSCCCSEE
T ss_pred CCCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECC-CCEEEEEEEeCCCCCCcc
Confidence 34578899999998886443 334444445544330 122456777 999999999994222322
Q ss_pred ceEEEEEEEE-cCceEEE
Q 048043 718 LFAQGYLSWV-STKHTVR 734 (742)
Q Consensus 718 ~~~~G~i~~~-~~~~~v~ 734 (742)
-.+.+++.-. ++..+++
T Consensus 95 Ytl~a~l~~~~~~~~~~~ 112 (120)
T 3isy_A 95 YEVKVTFKGRAENLKQVQ 112 (120)
T ss_dssp EEEEEEECCEETTCCCCE
T ss_pred EEEEEEEEeeeccceeee
Confidence 3455665544 3444443
No 60
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=60.55 E-value=34 Score=29.47 Aligned_cols=52 Identities=13% Similarity=0.074 Sum_probs=43.1
Q ss_pred EEEEEEEEeeCCCCceEEEEEECCCCcEEEEEcCeeEecCCCcEEEEEEEEEEcc
Q 048043 659 QTYNRTVTNVGQAESSYTHKIVAPEGVTVTVEPENISFTKKNQKAIYSITFTRSQ 713 (742)
Q Consensus 659 ~~~~~tv~n~~~~~~~y~~~~~~p~~~~v~v~p~~~~~~~~g~~~~~~v~~~~~~ 713 (742)
.+.+.+|+|.++...-|++....|.-. .|.|..=.+.| |++.++.|+..+..
T Consensus 25 g~~~l~L~N~t~~~vAFKVKtT~p~~Y--rVrP~~G~I~P-g~~~~I~I~~q~~~ 76 (116)
T 1m1s_A 25 GNSTHNITSESDSRLAFKVKSSNNEHY--RVRPVYGFVDA-KGKSKLDINRLPGP 76 (116)
T ss_dssp EEEEEEEEECSSSEEEEEEEESCTTTE--EEECSEEEECT-TCEEEEEEEECSCC
T ss_pred CEEEEEEECCCCCeEEEEEEecCCCce--EEcCCceEECC-CCeEEEEEEeCCCC
Confidence 366799999999999999998887765 56798887877 99999999998753
No 61
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=59.77 E-value=24 Score=30.84 Aligned_cols=52 Identities=17% Similarity=0.301 Sum_probs=44.6
Q ss_pred cEEEEEEEEeeCCCCceEEEEEECCCCcEEEEEcCeeEecCCCcEEEEEEEEEEc
Q 048043 658 SQTYNRTVTNVGQAESSYTHKIVAPEGVTVTVEPENISFTKKNQKAIYSITFTRS 712 (742)
Q Consensus 658 ~~~~~~tv~n~~~~~~~y~~~~~~p~~~~v~v~p~~~~~~~~g~~~~~~v~~~~~ 712 (742)
..+-.++|+|.++...-|++....|.-. .|.|..=.+.| |++..+.|++.+.
T Consensus 26 ~~~~~l~l~N~s~~~vaFKVKTT~p~~y--~VrP~~Gii~P-~~s~~v~V~~q~~ 77 (126)
T 1msp_A 26 KHTYHIKITNAGGRRIGWAIKTTNMRRL--SVDPPCGVLDP-KEKVLMAVSCDTF 77 (126)
T ss_dssp CCCEEEEEEECSSSCEEEEEEESCTTTE--EEESCEEEECT-TCEEEEEEEECCC
T ss_pred ceEEEEEEECCCCCeEEEEEEcCCCCcE--EEECCCeEECC-CCEEEEEEEecCC
Confidence 4666799999999999999999988875 56799888888 9999999998874
No 62
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=59.64 E-value=19 Score=31.59 Aligned_cols=52 Identities=17% Similarity=0.170 Sum_probs=44.6
Q ss_pred cEEEEEEEEeeCCCCceEEEEEECCCCcEEEEEcCeeEecCCCcEEEEEEEEEEc
Q 048043 658 SQTYNRTVTNVGQAESSYTHKIVAPEGVTVTVEPENISFTKKNQKAIYSITFTRS 712 (742)
Q Consensus 658 ~~~~~~tv~n~~~~~~~y~~~~~~p~~~~v~v~p~~~~~~~~g~~~~~~v~~~~~ 712 (742)
..+-+++|+|.++...-|++....|.-. .|.|..=.+.| |++..+.|++.+.
T Consensus 28 ~~~~~l~L~N~s~~~vaFKVKTT~p~~y--~VrP~~G~i~P-~~s~~v~V~~~~~ 79 (128)
T 1z9l_A 28 VVTTNLKLQNPSDRKVCFKVKTTAPRRY--CVRPNSGVIDP-GSIVTVSVMLQPF 79 (128)
T ss_dssp CEEEEEEEECCSSSCEEEEEEESCGGGE--EEESCEEEECT-TCEEEEEEEECCC
T ss_pred eEEEEEEEECCCCCeEEEEEECCCCCce--EEeCCCcEECC-CCeEEEEEEECcC
Confidence 5677899999999999999999888764 56799888888 9999999999875
No 63
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=57.06 E-value=1.1e+02 Score=30.12 Aligned_cols=58 Identities=21% Similarity=0.335 Sum_probs=41.4
Q ss_pred eeeCCccEEEEEEEEeeCCCCceEEEE--EEC------CC--CcEEEEEcCeeEecCCCcEEEEEEEEEEc
Q 048043 652 VILGSTSQTYNRTVTNVGQAESSYTHK--IVA------PE--GVTVTVEPENISFTKKNQKAIYSITFTRS 712 (742)
Q Consensus 652 ~~~~~~~~~~~~tv~n~~~~~~~y~~~--~~~------p~--~~~v~v~p~~~~~~~~g~~~~~~v~~~~~ 712 (742)
+-+.++.+..+++|+|.++. .|.+. ++. |+ ...+.|+|..+++.+ |+++.++|.....
T Consensus 37 vIy~~~~k~~sl~l~N~~~~--P~LvQsWid~~~~~~~p~~~~~pfivtPPl~rl~p-g~~q~lRI~~~~~ 104 (257)
T 3q48_A 37 VVFPASEREVTLRVSNTSGT--PVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRVEP-NGGAVLRIAYLKA 104 (257)
T ss_dssp EEEETTCSEEEEEEEECSSS--CEEEEEEEESSCCSSCGGGGCCSEEEESSEEEECT-TEEEEEEEEECCC
T ss_pred EEEeCCCcEEEEEEEeCCCC--eEEEEEEEEcCCCccCcccccCCEEEcCCEEEECC-CCceEEEEEECCC
Confidence 33445567888999998764 55554 332 11 234889999999999 9999999977654
No 64
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=56.93 E-value=76 Score=35.44 Aligned_cols=80 Identities=15% Similarity=0.032 Sum_probs=51.0
Q ss_pred CCCceeeeeCCccEEEEEEEEeeCCCCceE-EEEEECCCCcEEEEEcCeeEecCCCcEEEEEEEEEEccCCCCceEEEEE
Q 048043 646 NYPSFSVILGSTSQTYNRTVTNVGQAESSY-THKIVAPEGVTVTVEPENISFTKKNQKAIYSITFTRSQKTSALFAQGYL 724 (742)
Q Consensus 646 n~ps~~~~~~~~~~~~~~tv~n~~~~~~~y-~~~~~~p~~~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~G~i 724 (742)
..|.+++... .+.+++.+|+|.+..+..- ++.+..|.+.++.. ....+.+ |++.+++++|+.+.......|.=-+
T Consensus 363 ~~~~~~~~~g-~~~~~~~~vtn~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-g~~~t~~~~vt~~~~~~~g~y~l~~ 438 (601)
T 1w8o_A 363 TIPDVALEPG-QQVTVPVAVTNQSGIAVPKPSLQLDASPDWQVQG--SVEPLMP-GRQAKGQVTITVPAGTTPGRYRVGA 438 (601)
T ss_dssp ECCCEEECTT-CEEEEEEEEECCSSSCBSSCEEEEECCTTSEEEE--EECCBCT-TCEEEEEEEEECCTTCCCEEEEEEE
T ss_pred cCccceecCC-ceeEEEEEEECCCceeccCceEEEecCCCcEEec--cccccCC-CCceEEEEEEecCCCCCCCcEEeeE
Confidence 3466655544 4788999999976543322 44466688888776 3456666 9999999999887543323444445
Q ss_pred EEEcC
Q 048043 725 SWVST 729 (742)
Q Consensus 725 ~~~~~ 729 (742)
.+...
T Consensus 439 ~~~~~ 443 (601)
T 1w8o_A 439 TLRTS 443 (601)
T ss_dssp EEEET
T ss_pred EEEec
Confidence 55543
No 65
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=54.62 E-value=24 Score=31.96 Aligned_cols=52 Identities=19% Similarity=0.183 Sum_probs=44.4
Q ss_pred cEEEEEEEEeeCCCCceEEEEEECCCCcEEEEEcCeeEecCCCcEEEEEEEEEEc
Q 048043 658 SQTYNRTVTNVGQAESSYTHKIVAPEGVTVTVEPENISFTKKNQKAIYSITFTRS 712 (742)
Q Consensus 658 ~~~~~~tv~n~~~~~~~y~~~~~~p~~~~v~v~p~~~~~~~~g~~~~~~v~~~~~ 712 (742)
..+..++|+|.++...-|++....|.-. .|.|..=.+.| |++.++.|++.+.
T Consensus 36 ~~~~~l~L~N~s~~~VaFKVKTT~p~~y--~VrP~~GiI~P-~~s~~V~V~lq~~ 87 (152)
T 1wic_A 36 EKKTLIVLTNVTKNIVAFKVRTTAPEKY--RVKPSNSSCDP-GASIDIIVSPHGG 87 (152)
T ss_dssp CCCEEEEEEBCSSSCEEEEEEESCTTTE--EEESSEEEECT-TCEEEEEEEECSS
T ss_pred eEEEEEEEEcCCCCeEEEEEECCCCCce--eecCCCcEECC-CCeEEEEEEecCc
Confidence 3466799999999999999999988765 46799888888 9999999999875
No 66
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=51.84 E-value=25 Score=31.66 Aligned_cols=52 Identities=17% Similarity=0.165 Sum_probs=44.4
Q ss_pred cEEEEEEEEeeCCCCceEEEEEECCCCcEEEEEcCeeEecCCCcEEEEEEEEEEc
Q 048043 658 SQTYNRTVTNVGQAESSYTHKIVAPEGVTVTVEPENISFTKKNQKAIYSITFTRS 712 (742)
Q Consensus 658 ~~~~~~tv~n~~~~~~~y~~~~~~p~~~~v~v~p~~~~~~~~g~~~~~~v~~~~~ 712 (742)
..+-.++|+|.++...-|++....|.-. .|.|..=.+.| |++..+.|++.+.
T Consensus 32 ~~~~~l~L~N~s~~~VaFKVKTT~p~~y--~VrP~~GiI~P-~~s~~v~V~l~~~ 83 (147)
T 2cri_A 32 VVTTNLKLQNPSDRKVCFKVKTTAPRRY--CVRPNSGIIDP-GSIVTVSVMLQPF 83 (147)
T ss_dssp CCCEEEEEECCSSSCEEEEEEESCTTSE--EEESSEEECCT-TCEEEEEEEECCC
T ss_pred eEEEEEEEECCCCCcEEEEEECCCCccE--EEcCCCcEECC-CCeEEEEEEECCC
Confidence 4566799999999999999999988875 45799888888 9999999999874
No 67
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=48.67 E-value=29 Score=40.03 Aligned_cols=57 Identities=11% Similarity=0.121 Sum_probs=36.1
Q ss_pred CccEEEEEEEEeeCCCCceEEEE--EECCCC-----cEEEEEcCee-EecCCCcEEEEEEEEEEcc
Q 048043 656 STSQTYNRTVTNVGQAESSYTHK--IVAPEG-----VTVTVEPENI-SFTKKNQKAIYSITFTRSQ 713 (742)
Q Consensus 656 ~~~~~~~~tv~n~~~~~~~y~~~--~~~p~~-----~~v~v~p~~~-~~~~~g~~~~~~v~~~~~~ 713 (742)
+...+++++|||+|+....-.+. +..|.+ .+.-.--.++ .+.| ||+++++++|+...
T Consensus 614 ~~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~~L~p-Ges~~V~~~l~~~~ 678 (721)
T 2x41_A 614 GETLRVQYRIENTGGRAGKEVSQVYIKAPKGKIDKPFQELKAFHKTRLLNP-GESEEVVLEIPVRD 678 (721)
T ss_dssp SSEEEEEEEEEECSSSCBCCEEEEEEECCCSSSCCCSCEEEEEEECCCBCT-TCEEEEEEEEEGGG
T ss_pred CCeEEEEEEEEECCCCCCcEEeeEEEccCCCCCCCchHHhhcccccccCCC-CCeEEEEEEECHHH
Confidence 34688999999999975444333 334422 1111222334 5666 99999999998764
No 68
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=47.00 E-value=45 Score=32.05 Aligned_cols=69 Identities=10% Similarity=0.134 Sum_probs=45.2
Q ss_pred CccEEEEEEEEeeCCCCceEEEEEECCCCcEEEEEcCeeEecCCCcEEEEEEEEEEccCCCCce--EEEEEEEE
Q 048043 656 STSQTYNRTVTNVGQAESSYTHKIVAPEGVTVTVEPENISFTKKNQKAIYSITFTRSQKTSALF--AQGYLSWV 727 (742)
Q Consensus 656 ~~~~~~~~tv~n~~~~~~~y~~~~~~p~~~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~~~~~~--~~G~i~~~ 727 (742)
+...+.+++++|.|+.+...+--.....-..+ +...-.+.| |++.+++|++.+...+...| ....|.+.
T Consensus 133 g~~~~~~f~i~N~G~~pL~I~~v~~scgct~~--~~~~~~i~P-Ge~~~i~v~~~~~~~~g~~~~~~~~~i~v~ 203 (220)
T 2qsv_A 133 GETTKAAIEIRNVGAGPLRLHSVTTRNPALTA--VPDRTEIKP-GGSTLLRIAVDPQVMKAEGWQSIAADISII 203 (220)
T ss_dssp TSCEEEEEEEEECSSSCEEEEEEEECSTTEEE--EESCSEECT-TCEEEEEEEECHHHHHHTTCSEEEEEEEEE
T ss_pred CCeEEEEEEEEECCCCCEEEEEEEeCCCCEee--ecCCccCCC-CCEEEEEEEEecCCCCCcccceeccEEEEE
Confidence 34688899999999987776433333333333 344456777 99999999998765422012 56777665
No 69
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=44.58 E-value=26 Score=29.03 Aligned_cols=21 Identities=24% Similarity=0.218 Sum_probs=15.3
Q ss_pred eeCCccEEEEEEEEeeCCCCc
Q 048043 653 ILGSTSQTYNRTVTNVGQAES 673 (742)
Q Consensus 653 ~~~~~~~~~~~tv~n~~~~~~ 673 (742)
....+..+++++|+|.|+.+.
T Consensus 14 ~lN~gr~~~~l~V~NtGDRPI 34 (101)
T 4ep8_B 14 ALNTGRATCRVVVENHGDRPI 34 (101)
T ss_dssp ECSTTCCEEEEEEEECSSSCE
T ss_pred EEcCCCCEEEEEEEeCCCcce
Confidence 334446788899999998754
No 70
>3d33_A Domain of unknown function with AN immunoglobulin beta-sandwich fold; structural genomics, joint center for structural genomics; HET: MSE; 1.70A {Bacteroides vulgatus atcc 8482}
Probab=38.04 E-value=1.8e+02 Score=24.48 Aligned_cols=69 Identities=13% Similarity=0.233 Sum_probs=49.2
Q ss_pred ceeeeeCCccEEEEEEEEeeCCCCceEEEEEECCCCcEEEEEcCeeEecCCCcEEEEEEEEEEccCCCCceEEEEEEE
Q 048043 649 SFSVILGSTSQTYNRTVTNVGQAESSYTHKIVAPEGVTVTVEPENISFTKKNQKAIYSITFTRSQKTSALFAQGYLSW 726 (742)
Q Consensus 649 s~~~~~~~~~~~~~~tv~n~~~~~~~y~~~~~~p~~~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~G~i~~ 726 (742)
.+.+.|...-..++++|+|.......|.-.+..+.+..+++. +.. -.+-+++|.+..... .++.|...+
T Consensus 39 ~L~I~F~~~~~~vtItI~~~~tG~iVY~~~v~~~~~~~~~I~-----L~~-~~~G~Y~L~i~~~~~---~~l~G~F~i 107 (108)
T 3d33_A 39 LLTLKNASPDRDMTIRITDMAKGGVVYENDIPEVQSAYITIS-----IAN-FPAEEYKLEITGTPS---GHLTGYFTK 107 (108)
T ss_dssp EEEEEESSCCSEEEEEEEETTTCCEEEEEEECGGGTTEEEEE-----CTT-SCSEEEEEEEEEESS---CEEEEEEEE
T ss_pred EEEEEECCcCCCEEEEEEECCCCcEEEEEeecCCCCcEEEEE-----cCC-ccCceEEEEEEeCCC---CEEEEEEEe
Confidence 456677766788899999877777889988877766676664 322 335788888876633 588887764
No 71
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=37.88 E-value=45 Score=28.82 Aligned_cols=22 Identities=14% Similarity=0.222 Sum_probs=16.1
Q ss_pred eeeCCccEEEEEEEEeeCCCCc
Q 048043 652 VILGSTSQTYNRTVTNVGQAES 673 (742)
Q Consensus 652 ~~~~~~~~~~~~tv~n~~~~~~ 673 (742)
+....+..+++++|+|.|+.+.
T Consensus 19 I~lN~gr~~~~l~V~NtGDRPI 40 (126)
T 4ubp_B 19 IEINAGREKTTIRVSNTGDRPI 40 (126)
T ss_dssp EETTTTSCEEEEEEEECSSSCE
T ss_pred EEeCCCCcEEEEEEEeCCCCCE
Confidence 3444456788899999998754
No 72
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=37.88 E-value=45 Score=28.82 Aligned_cols=22 Identities=14% Similarity=0.222 Sum_probs=16.1
Q ss_pred eeeCCccEEEEEEEEeeCCCCc
Q 048043 652 VILGSTSQTYNRTVTNVGQAES 673 (742)
Q Consensus 652 ~~~~~~~~~~~~tv~n~~~~~~ 673 (742)
+....+..+++++|+|.|+.+.
T Consensus 19 I~lN~gr~~~~l~V~NtGDRPI 40 (126)
T 4ac7_B 19 IEINAGREKTTIRVSNTGDRPI 40 (126)
T ss_dssp EETTTTSCEEEEEEEECSSSCE
T ss_pred EEeCCCCcEEEEEEEeCCCCCE
Confidence 3444456788899999998754
No 73
>2xg5_A PAPD, chaperone protein PAPD; chaperone, chaperone-surface active protein complex; HET: EC2 EC5; 2.00A {Escherichia coli} PDB: 1pdk_A 2uy6_A 2uy7_A 2j2z_A 2xg4_A* 2w07_A* 3me0_A* 1n0l_A 2wmp_A 3dpa_A 2j7l_A 1qpp_A 1qpx_A
Probab=37.20 E-value=1.6e+02 Score=28.24 Aligned_cols=56 Identities=11% Similarity=0.165 Sum_probs=39.6
Q ss_pred eCCccEEEEEEEEeeCCCCceEEEEE--ECCC-----CcEEEEEcCeeEecCCCcEEEEEEEEEE
Q 048043 654 LGSTSQTYNRTVTNVGQAESSYTHKI--VAPE-----GVTVTVEPENISFTKKNQKAIYSITFTR 711 (742)
Q Consensus 654 ~~~~~~~~~~tv~n~~~~~~~y~~~~--~~p~-----~~~v~v~p~~~~~~~~g~~~~~~v~~~~ 711 (742)
+.++.+..+++|+|.++. ..|-+.. .... ...+.|+|..+++.+ |+++.++|....
T Consensus 11 y~~~~k~~sl~l~N~~~~-~p~LvQsWi~~~~~~~~~~~pfivtPPl~rl~p-~~~q~lRI~~~~ 73 (218)
T 2xg5_A 11 FDGSEKSMTLDISNDNKQ-LPYLAQAWIENENQEKIITGPVIATPPVQRLEP-GAKSMVRLSTTP 73 (218)
T ss_dssp EETTSSEEEEEEEECCSS-SCEEEEEEEECTTSCEECSSSEEEECSEEEECT-TCEEEEEEEECG
T ss_pred EeCCCCEEEEEEEcCCCC-CcEEEEEEEecCCCCccccCCEEEcCCeEEECC-CCceEEEEEecC
Confidence 344467888999998753 2555543 3221 223678999999999 999999998776
No 74
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=37.15 E-value=20 Score=26.88 Aligned_cols=37 Identities=14% Similarity=0.077 Sum_probs=27.8
Q ss_pred cchhHHHHHHHHHHHhhCCCCCHHHHHHHHHcccccc
Q 048043 530 SMSCPHLSGVAALLKSAHPDWSPAAIKSAIMTTADIV 566 (742)
Q Consensus 530 SmAaP~VAG~aALl~q~~p~~s~~~ik~~L~~TA~~~ 566 (742)
|-..|..--.+..|++.||+++...|+..|...-..+
T Consensus 3 ~~~~~~~ee~l~~L~emFP~ld~~~I~~vL~a~~gdv 39 (59)
T 1wgl_A 3 SGSSGCSEEDLKAIQDMFPNMDQEVIRSVLEAQRGNK 39 (59)
T ss_dssp SCSSSSCHHHHHHHHHHCSSSCHHHHHHHHTTTTTCH
T ss_pred CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHcCCCH
Confidence 3334444556778999999999999999998865544
No 75
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=36.39 E-value=1e+02 Score=36.07 Aligned_cols=43 Identities=19% Similarity=0.146 Sum_probs=29.1
Q ss_pred ceeeccccchhHHHHHHHHHHHhhCCCCC-HHHHHHHHHccccc
Q 048043 523 FNMVAGTSMSCPHLSGVAALLKSAHPDWS-PAAIKSAIMTTADI 565 (742)
Q Consensus 523 y~~~sGTSmAaP~VAG~aALl~q~~p~~s-~~~ik~~L~~TA~~ 565 (742)
...++|..++-|-+--+.|+|...+|.-- ...|-++|.--..|
T Consensus 619 VVl~sG~pv~m~w~~~v~AIL~aw~pGqegG~AiAdVLfG~vNP 662 (845)
T 3abz_A 619 IVNQSGTPVEFPWLEDANALVQAWYGGNELGNAIADVLYGDVVP 662 (845)
T ss_dssp EEEECSSCCCCTTGGGCSEEEECCCCCTTHHHHHHHHHTTSSCC
T ss_pred EEEeCCCcccCcchhccCeEEEcCCCcHHHHHHHHHHhcCCcCC
Confidence 35567777777777777777777777654 56677777665554
No 76
>4ay0_A Chaperone protein CAF1M; amino acid motifs, bacterial capsules, bacterial proteins, gene expression regulation, molecular chaperones, binding; 1.52A {Yersinia pestis} PDB: 1p5v_A 1p5u_A 1z9s_A 2os7_A 3dos_A 3dpb_A 3dsn_A 4b0m_M 4az8_A 4ayf_A
Probab=32.27 E-value=1.9e+02 Score=27.64 Aligned_cols=56 Identities=13% Similarity=0.030 Sum_probs=39.3
Q ss_pred CccEEEEEEEEeeCCCCceEEEE--EEC---C--CCcEEEEEcCeeEecCCCcEEEEEEEEEEccC
Q 048043 656 STSQTYNRTVTNVGQAESSYTHK--IVA---P--EGVTVTVEPENISFTKKNQKAIYSITFTRSQK 714 (742)
Q Consensus 656 ~~~~~~~~tv~n~~~~~~~y~~~--~~~---p--~~~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~ 714 (742)
++.+.++++|+|.++. .|-+. +.. . ...-+.++|..+++.+ |+++.++|.......
T Consensus 25 ~~~k~~sl~l~N~~~~--p~LvQswv~~~~~~~~~~~pFivtPPl~Rl~p-~~~q~lRI~~~~~~L 87 (218)
T 4ay0_A 25 LDAAGVMVSVKNTQDY--PVLIQSRIYDENKEKESEDPFVVTPPLFRLDA-KQQNSLRIAQAGGVF 87 (218)
T ss_dssp TTCSCEEEEEECCSSS--CEEEEEEEECTTSCCCSSCSEEEESSEEEECT-TCEEEEEEEECSCCC
T ss_pred CCCcEEEEEEEcCCCC--CEEEEEEEecCCCCccccCCEEECCCeEEeCC-CCceEEEEEecCCCC
Confidence 4467788999997754 45554 321 1 1233678999999999 999999997765443
No 77
>2kq1_A BH0266 protein; solution NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Bacillus halodurans}
Probab=29.93 E-value=10 Score=32.86 Aligned_cols=55 Identities=20% Similarity=0.186 Sum_probs=32.7
Q ss_pred cEEEEEEEEeeCCCCceEEEEEE-CCCCcEEEEEcCeeEecC-CCcEEEEEEEEEEc
Q 048043 658 SQTYNRTVTNVGQAESSYTHKIV-APEGVTVTVEPENISFTK-KNQKAIYSITFTRS 712 (742)
Q Consensus 658 ~~~~~~tv~n~~~~~~~y~~~~~-~p~~~~v~v~p~~~~~~~-~g~~~~~~v~~~~~ 712 (742)
...+..-|++.+....+..+.+. .|.|+++++.|..+++.- +-.+++|.|+++..
T Consensus 54 ~i~~~vDLs~l~~G~~~vpv~v~~lp~~v~v~v~P~~V~V~i~~~~~k~~pV~v~~~ 110 (119)
T 2kq1_A 54 SYEVFVDLTEAGEGSHTVDVEHRGFPGDLAVTVEPRMARVQLEERQTVSVPVTVEMI 110 (119)
T ss_dssp CCEEEEECTTCCBEEEEEECEEESSCTTSEEEESCCEEEEEEESCCCCCCCCCCCCC
T ss_pred CEEEEEECccCCCCeEEEEEEEecCCCCeEEEEcCCEEEEEEEEEEEEEEEEEEEEC
Confidence 34555556666544444445566 688988888888766552 14445665555443
No 78
>4djm_A DRAB; chaperone, PILI; 2.52A {Escherichia coli}
Probab=29.13 E-value=2.6e+02 Score=27.18 Aligned_cols=56 Identities=16% Similarity=0.085 Sum_probs=39.7
Q ss_pred eCCccEEEEEEEEeeCCCCceEEEEE--ECC---CCcEEEEEcCeeEecCCCcEEEEEEEEEEc
Q 048043 654 LGSTSQTYNRTVTNVGQAESSYTHKI--VAP---EGVTVTVEPENISFTKKNQKAIYSITFTRS 712 (742)
Q Consensus 654 ~~~~~~~~~~tv~n~~~~~~~y~~~~--~~p---~~~~v~v~p~~~~~~~~g~~~~~~v~~~~~ 712 (742)
+..+.+..+++|+|.++. .|-+.. ... ....+.++|..+++.+ |+.+.++|.....
T Consensus 33 y~~~~k~~sl~l~N~~~~--P~LvQsWv~~~~~~~~~pfivtPPlfRlep-~~~q~lRIi~~~~ 93 (239)
T 4djm_A 33 YNPASSGETLTVINDQDY--PMLVQSEVLSEDQKSPAPFVVTPPLFRLDG-QQSSRLRIVRTGG 93 (239)
T ss_dssp ECTTSSCEEEEEEECSSS--CEEEEEEEECTTSSSBCSEEEESSEEEECT-TEEEEEEEEECSC
T ss_pred EeCCCCEEEEEEEeCCCC--cEEEEEEEEcCCCCccCCEEEcCCeEEECC-CCceEEEEEECCC
Confidence 444567788999998754 465543 221 1234788999999999 9999999976654
No 79
>1klf_A FIMC chaperone, chaperone protein FIMC; adhesin-chaperone complex, mannose-bound, chaperone/adhesin complex complex; HET: MAN; 2.79A {Escherichia coli} SCOP: b.1.11.1 b.7.2.1 PDB: 1kiu_A* 3rfz_C 1qun_A 1bf8_A 1ze3_C 3bwu_C 3jwn_C
Probab=29.12 E-value=2.7e+02 Score=26.25 Aligned_cols=56 Identities=16% Similarity=0.143 Sum_probs=39.2
Q ss_pred eCCccEEEEEEEEeeCCCCceEEEEE--ECC---CCcEEEEEcCeeEecCCCcEEEEEEEE-EE
Q 048043 654 LGSTSQTYNRTVTNVGQAESSYTHKI--VAP---EGVTVTVEPENISFTKKNQKAIYSITF-TR 711 (742)
Q Consensus 654 ~~~~~~~~~~tv~n~~~~~~~y~~~~--~~p---~~~~v~v~p~~~~~~~~g~~~~~~v~~-~~ 711 (742)
+.++.+..+++|+|.++. ..|-+.. ... ....+.|+|..+++.+ |+++.++|.. ..
T Consensus 11 y~~~~k~~sl~l~N~~~~-~p~LvQsWi~~~~~~~~~pfivtPPl~rl~p-~~~q~lRI~~~~~ 72 (205)
T 1klf_A 11 YPAGQKQVQLAVTNNDEN-STYLIQSWVENADGVKDGRFIVTPPLFAMKG-KKENTLRILDATN 72 (205)
T ss_dssp EETTCSEEEEEEEECCSS-CCEEEEEEEEETTSCCCSSEEEESSEEEECS-SEEEEEEEEECSC
T ss_pred EeCCCcEEEEEEEcCCCC-CcEEEEEEEecCCCCccCCEEEcCCeEEECC-CCceEEEEEecCC
Confidence 334467888999998753 2455443 221 2245788999999999 9999999987 54
No 80
>2co7_B SAFB chaperone, putative fimbriae assembly chaperone; pilus subunit, adhesion, strand complementation, pathogenesis, fibril protein; 1.8A {Salmonella typhimurium} SCOP: b.1.11.1 b.7.2.1 PDB: 2co6_B
Probab=27.70 E-value=2.3e+02 Score=27.18 Aligned_cols=56 Identities=16% Similarity=0.080 Sum_probs=39.7
Q ss_pred eCCccEEEEEEEEeeCCCCceEEEEE--ECC---CCcEEEEEcCeeEecCCCcEEEEEEEEEEc
Q 048043 654 LGSTSQTYNRTVTNVGQAESSYTHKI--VAP---EGVTVTVEPENISFTKKNQKAIYSITFTRS 712 (742)
Q Consensus 654 ~~~~~~~~~~tv~n~~~~~~~y~~~~--~~p---~~~~v~v~p~~~~~~~~g~~~~~~v~~~~~ 712 (742)
+.++.+..+++|+|.++. .|-+.. ... ....+.++|..+++.+ |+++.++|.....
T Consensus 23 y~~~~k~~sl~l~N~~~~--p~LvQsWv~~~~~~~~~pfivtPPl~rl~p-~~~q~lRI~~~~~ 83 (221)
T 2co7_B 23 YHAGTAGATLSVSNPQNY--PILVQSSVKAADKSSPAPFLVMPPLFRLEA-NQQSQLRIVRTGG 83 (221)
T ss_dssp EETTSSCEEEEEECCSSS--CEEEEEEEEETTSSSBCSEEEESSEEEECT-TCEEEEEEEECCC
T ss_pred EcCCCCEEEEEEEcCCCC--cEEEEEEEecCCCCccCCEEEeCCEEEECC-CCceEEEEEECCC
Confidence 334467778999998754 555443 211 2245778999999999 9999999987653
No 81
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=27.40 E-value=2.7e+02 Score=23.15 Aligned_cols=66 Identities=18% Similarity=0.216 Sum_probs=46.1
Q ss_pred ceeeeeCCccEEEEEEEEeeCCCCceEEEEEECCCCcEEEEEcCeeEecCCCcEEEEEEEEEEccCCCCceEEEEEEE
Q 048043 649 SFSVILGSTSQTYNRTVTNVGQAESSYTHKIVAPEGVTVTVEPENISFTKKNQKAIYSITFTRSQKTSALFAQGYLSW 726 (742)
Q Consensus 649 s~~~~~~~~~~~~~~tv~n~~~~~~~y~~~~~~p~~~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~G~i~~ 726 (742)
.+++.|...-..++++|+|.......|.-.+..|. .+++ .+.. .++-++.|.+.... .++.|...+
T Consensus 35 vlsV~F~~~~~~vTItItNe~TG~~VYs~~~s~p~--~i~I-----dLng-e~sG~Y~IeI~~~~----~~LtG~F~i 100 (101)
T 3sd2_A 35 ILNVSFGRAKDYAIITVTNKATGEIVHSKTYHNTS--IVMI-----DMSS-CEKGEYTIHIILND----CLLEGTFTV 100 (101)
T ss_dssp EEEEEESSCCSCEEEEEEETTTCCEEEEEEESSCS--EEEE-----ECTT-SCSEEEEEEEEETT----EEEEEEEEE
T ss_pred EEEEEeccCCCcEEEEEEECCCCcEEEEEeccCCc--EEEE-----EcCC-CcCceEEEEEEeCC----cEEEEEEEe
Confidence 56777887778889999998777788888777654 3333 3433 45678888887543 477787654
No 82
>1ni7_A ER75, hypothetical protein YGDK; RD-structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Escherichia coli} SCOP: d.224.1.1
Probab=26.31 E-value=45 Score=30.30 Aligned_cols=33 Identities=21% Similarity=0.231 Sum_probs=27.4
Q ss_pred eeccccchhHHHHHHHHHHHhhCCCCCHHHHHHH
Q 048043 525 MVAGTSMSCPHLSGVAALLKSAHPDWSPAAIKSA 558 (742)
Q Consensus 525 ~~sGTSmAaP~VAG~aALl~q~~p~~s~~~ik~~ 558 (742)
.+.|-| =|+.|-|++|||++.+-..+|+||.+.
T Consensus 78 ~F~adS-DA~IvkGL~AlL~~~~~G~tp~eIl~~ 110 (155)
T 1ni7_A 78 HFFGDS-EGRIVRGLLAVLLTAVEGKTAAELQAQ 110 (155)
T ss_dssp CCEEEE-SSHHHHHHHHHHHHHTTTCCHHHHHHS
T ss_pred EEeeCC-ccHHHHHHHHHHHHHHcCCCHHHHHhC
Confidence 344555 489999999999999999999998753
No 83
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=26.16 E-value=3.5e+02 Score=28.22 Aligned_cols=50 Identities=14% Similarity=0.228 Sum_probs=33.3
Q ss_pred CccEEEEEEEEeeCCCCceE---E---EEEEC----------CC------CcEEEEEcCeeEecCCCcEEEEEEEEEE
Q 048043 656 STSQTYNRTVTNVGQAESSY---T---HKIVA----------PE------GVTVTVEPENISFTKKNQKAIYSITFTR 711 (742)
Q Consensus 656 ~~~~~~~~tv~n~~~~~~~y---~---~~~~~----------p~------~~~v~v~p~~~~~~~~g~~~~~~v~~~~ 711 (742)
+.+.+++.+|||.|+++... . +.... |. | ++ +|+ -+.| ||+++++|+.+-
T Consensus 297 gR~l~~~~~VtN~g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~G--L~-s~~--pI~P-GETrt~~V~a~d 368 (419)
T 3rfr_A 297 GRELTINVKVKNGTSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRG--LS-NDD--VIAP-GESKEIVVKIQD 368 (419)
T ss_dssp SSEEEEEEEEECCSSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCC--CC-CCC--CBCT-TCEEEEEEEEEC
T ss_pred CcEEEEEEEEecCCCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccC--CC-CCC--CcCC-CcceEEEEEeeh
Confidence 34788999999999976432 1 11111 11 3 34 565 5777 999999999875
No 84
>3g0m_A Cysteine desulfuration protein SUFE; YNHA, csgid, national I of allergy and infectious diseases, niaid, hydrolase, struc genomics; 1.76A {Salmonella typhimurium LT2} SCOP: d.224.1.1 PDB: 1mzg_A
Probab=22.35 E-value=43 Score=29.90 Aligned_cols=33 Identities=15% Similarity=0.144 Sum_probs=27.9
Q ss_pred eeeccccchhHHHHHHHHHHHhhCCCCCHHHHHH
Q 048043 524 NMVAGTSMSCPHLSGVAALLKSAHPDWSPAAIKS 557 (742)
Q Consensus 524 ~~~sGTSmAaP~VAG~aALl~q~~p~~s~~~ik~ 557 (742)
-.+.|-| =|+.|-|++||+++.+-..+|+||.+
T Consensus 70 l~f~adS-DA~IvkGl~alL~~~~~G~tp~eIl~ 102 (141)
T 3g0m_A 70 IELQGDS-DAAIVKGLMAVVFILYHQMTAQDIVH 102 (141)
T ss_dssp EEEEEEE-SSHHHHHHHHHHHHHHTTCBHHHHHH
T ss_pred EEEEecC-ccHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 4455666 48999999999999999999999865
No 85
>1l4i_A SFAE protein; periplasmic chaperone, immunoglobulin fold; 2.20A {Escherichia coli} SCOP: b.1.11.1 b.7.2.1
Probab=21.98 E-value=1.7e+02 Score=27.78 Aligned_cols=53 Identities=19% Similarity=0.211 Sum_probs=37.5
Q ss_pred eCCccEEEEEEEEeeCCCCceEEEEE--E-CC--CCcEEEEEcCeeEecCCCcEEEEEEE
Q 048043 654 LGSTSQTYNRTVTNVGQAESSYTHKI--V-AP--EGVTVTVEPENISFTKKNQKAIYSIT 708 (742)
Q Consensus 654 ~~~~~~~~~~tv~n~~~~~~~y~~~~--~-~p--~~~~v~v~p~~~~~~~~g~~~~~~v~ 708 (742)
+.++.+..+++|+|.++ ...|-+.. . .+ ....+.|+|..+++.+ |+++.++|.
T Consensus 11 y~~~~k~~sl~l~N~~~-~~p~LvQsWv~~~~~~~~~pfivtPPl~rl~p-~~~q~lRI~ 68 (206)
T 1l4i_A 11 YPEGQKQVQLAVTNNDD-KSSYLIQSWIENAEGKKDARFVITPPLFSMQG-KKENTLRII 68 (206)
T ss_dssp EETTCSEEEEEEEECCT-TCEEEEEEEEEETTSCBCSSEEEESSEEEEES-SEEEEEEEE
T ss_pred EeCCCcEEEEEEEeCCC-CccEEEEEEEecCCCCccCCEEEcCCeEEECC-CCceEEEEE
Confidence 33446788899999874 24555543 2 11 2245778999999999 999999998
Done!