Query 048047
Match_columns 466
No_of_seqs 214 out of 1853
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 09:40:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048047.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048047hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vte_A Tetrahydrocannabinolic 100.0 3.6E-84 1.2E-88 676.6 45.6 456 1-461 1-515 (518)
2 3fw9_A Reticuline oxidase; BI- 100.0 3.4E-82 1.2E-86 660.2 44.2 450 6-459 1-494 (495)
3 3tsh_A Pollen allergen PHL P 4 100.0 7.2E-78 2.5E-82 632.9 40.7 448 3-461 7-498 (500)
4 3rja_A Carbohydrate oxidase; p 100.0 3.3E-72 1.1E-76 583.8 35.5 422 6-459 2-472 (473)
5 3pop_A GILR oxidase; FAD bindi 100.0 3.2E-71 1.1E-75 578.8 39.1 423 15-458 5-501 (501)
6 2wdx_A Putative hexose oxidase 100.0 9.8E-68 3.3E-72 556.6 36.5 427 9-458 25-523 (523)
7 2ipi_A Aclacinomycin oxidoredu 100.0 7.1E-67 2.4E-71 550.2 40.2 432 5-459 19-520 (521)
8 2y3s_A TAML; oxidoreductase; H 100.0 1.2E-66 4.1E-71 548.8 37.4 421 20-459 34-528 (530)
9 1zr6_A Glucooligosaccharide ox 100.0 4E-65 1.4E-69 535.1 35.0 424 3-460 5-480 (503)
10 2bvf_A 6-hydroxy-D-nicotine ox 100.0 1.8E-62 6.1E-67 510.6 33.2 406 18-458 12-456 (459)
11 1w1o_A Cytokinin dehydrogenase 100.0 7.8E-36 2.7E-40 315.6 27.4 189 4-207 31-257 (534)
12 2exr_A Cytokinin dehydrogenase 100.0 3.7E-28 1.3E-32 255.7 31.6 160 42-207 53-250 (524)
13 4feh_A Oxidoreductase DPRE1; a 100.0 7.7E-27 2.6E-31 242.5 29.2 170 42-220 35-237 (481)
14 3pm9_A Putative oxidoreductase 100.0 8.6E-28 2.9E-32 249.6 16.9 174 42-220 43-252 (476)
15 4bby_A Alkyldihydroxyacetoneph 99.9 1.9E-27 6.5E-32 256.7 18.6 163 43-207 198-396 (658)
16 2vfr_A Xylitol oxidase, aldito 99.9 7.6E-26 2.6E-30 232.6 24.9 148 42-199 12-187 (422)
17 1wvf_A 4-cresol dehydrogenase 99.9 3.7E-27 1.3E-31 248.4 14.4 207 6-223 16-268 (520)
18 2uuu_A Alkyldihydroxyacetoneph 99.9 3.1E-26 1.1E-30 243.1 16.5 156 48-207 135-326 (584)
19 2i0k_A Oxidoreductase; MIX alp 99.9 1.5E-24 5.2E-29 229.8 12.8 169 19-199 9-225 (561)
20 1e8g_A Vanillyl-alcohol oxidas 99.9 5.7E-23 2E-27 218.0 18.0 171 48-223 68-300 (560)
21 3js8_A Cholesterol oxidase; ch 99.9 3.7E-23 1.3E-27 215.1 14.1 152 42-199 21-221 (540)
22 1f0x_A DLDH, D-lactate dehydro 99.9 8.8E-23 3E-27 215.3 14.9 154 48-207 43-284 (571)
23 3tx1_A UDP-N-acetylenolpyruvoy 99.8 5E-22 1.7E-26 195.5 7.3 146 48-197 52-217 (322)
24 1hsk_A UDP-N-acetylenolpyruvoy 99.8 2.3E-20 7.8E-25 184.7 5.6 140 48-195 46-209 (326)
25 3i99_A UDP-N-acetylenolpyruvoy 99.8 1.7E-19 5.9E-24 179.2 6.5 146 48-197 28-199 (357)
26 1uxy_A MURB, uridine diphospho 99.7 3.1E-18 1.1E-22 169.7 10.0 145 49-197 13-183 (340)
27 2gqt_A UDP-N-acetylenolpyruvyl 99.6 1E-16 3.4E-21 153.4 4.3 134 50-196 22-173 (268)
28 2yvs_A Glycolate oxidase subun 99.4 1.2E-13 4.2E-18 128.3 6.9 92 108-204 1-123 (219)
29 1ffv_C CUTM, flavoprotein of c 96.3 0.002 6.8E-08 62.0 3.2 119 50-178 4-133 (287)
30 1n62_C Carbon monoxide dehydro 94.4 0.043 1.5E-06 52.5 5.6 118 50-178 4-133 (288)
31 3nvz_B Xanthine dehydrogenase/ 91.9 0.21 7.1E-06 48.2 6.0 79 50-134 9-91 (305)
32 3hrd_C Nicotinate dehydrogenas 91.6 0.22 7.7E-06 47.7 5.8 75 51-130 3-82 (296)
33 1t3q_C Quinoline 2-oxidoreduct 91.5 0.22 7.6E-06 47.5 5.7 117 50-178 4-132 (288)
34 2w3s_A Xanthine dehydrogenase; 91.1 0.19 6.4E-06 51.3 5.0 74 54-133 180-257 (462)
35 1wvf_A 4-cresol dehydrogenase 87.2 1 3.4E-05 46.7 7.2 30 425-454 481-511 (520)
36 1rm6_B 4-hydroxybenzoyl-COA re 83.6 1.7 5.7E-05 42.1 6.3 76 50-131 5-84 (324)
37 4bby_A Alkyldihydroxyacetoneph 80.6 3.1 0.0001 44.4 7.6 29 424-452 625-654 (658)
38 1e8g_A Vanillyl-alcohol oxidas 60.1 7.9 0.00027 40.3 4.9 25 432-456 523-547 (560)
39 3unc_A Xanthine dehydrogenase/ 58.5 8.4 0.00029 44.4 5.0 79 50-134 232-314 (1332)
40 2i0k_A Oxidoreductase; MIX alp 50.2 5.9 0.0002 41.3 1.9 22 432-453 533-554 (561)
41 3pm9_A Putative oxidoreductase 48.9 6.9 0.00024 39.9 2.1 29 423-451 442-471 (476)
42 1f0x_A DLDH, D-lactate dehydro 40.8 14 0.00048 38.5 2.9 28 431-459 536-563 (571)
43 3js8_A Cholesterol oxidase; ch 37.2 13 0.00044 38.4 2.0 23 431-453 511-533 (540)
44 3p04_A Uncharacterized BCR; SE 32.3 46 0.0016 25.2 3.9 35 51-107 6-40 (87)
45 3zyv_A AOH1; oxidoreductase, m 28.4 39 0.0013 39.0 4.2 76 53-134 242-321 (1335)
46 2uuu_A Alkyldihydroxyacetoneph 28.3 20 0.00068 37.5 1.6 28 425-452 552-580 (584)
47 1wn2_A Peptidyl-tRNA hydrolase 27.7 84 0.0029 25.3 5.0 42 42-85 49-91 (121)
48 2lju_A Putative oxidoreductase 27.6 60 0.0021 25.7 3.9 37 43-82 52-88 (108)
49 1xty_A PTH, peptidyl-tRNA hydr 26.0 87 0.003 25.1 4.8 42 42-85 48-90 (120)
50 1rlk_A Hypothetical protein TA 23.9 92 0.0031 24.8 4.5 42 42-85 45-87 (117)
51 2lnd_A De novo designed protei 23.5 74 0.0025 23.5 3.5 33 53-85 30-62 (112)
52 2zv3_A PTH, peptidyl-tRNA hydr 23.2 98 0.0033 24.6 4.5 42 42-85 43-85 (115)
53 2jya_A AGR_C_3324P, uncharacte 22.6 64 0.0022 25.4 3.2 36 43-81 44-79 (106)
54 1rzw_A Protein AF2095(GR4); be 22.0 1.2E+02 0.0039 24.6 4.7 42 42-85 42-84 (123)
55 1yht_A DSPB; beta barrel, hydr 21.7 57 0.0019 31.8 3.4 30 57-86 91-122 (367)
56 1q7s_A BIT1, protein CGI-147; 20.4 1.3E+02 0.0045 23.9 4.8 41 42-84 45-86 (117)
57 2g2c_A Putative molybdenum cof 20.2 1.4E+02 0.0047 25.2 5.2 37 52-88 47-83 (167)
No 1
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=100.00 E-value=3.6e-84 Score=676.62 Aligned_cols=456 Identities=52% Similarity=0.947 Sum_probs=391.7
Q ss_pred CcchhhHHHHHhhcCC---CCCceEEcCCCCCchHHhhhcccccccCCCCCCCCCEEEecCCHHHHHHHHHHHHhcCCcE
Q 048047 1 AENHENFLKCLSLQSD---TISKVIYTQNNSSYSSVLKSSIQNLVFSTPTNQKPPFIITPFHVSEIQAAIKCSKKSGLQI 77 (466)
Q Consensus 1 ~~~~~~~~~~~~~~~~---~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dV~~~v~~a~~~~~~~ 77 (466)
+.++++|.+||+.... .+++.|++|+|+.|++++.++.+|.||+.....+|.+||+|+|++||+++|++|+++++||
T Consensus 1 ~~~~~~f~~c~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v 80 (518)
T 3vte_A 1 ANPRENFLKCFSKHIPNNVANPKLVYTQHDQLYMSILNSTIQNLRFISDTTPKPLVIVTPSNNSHIQATILCSKKVGLQI 80 (518)
T ss_dssp CCHHHHHHHHHHHHCCC----CCCEECTTSTTHHHHHHHTCCBGGGCSSSSCCCSEEECCCSHHHHHHHHHHHHHHTCEE
T ss_pred CChhHHHHHHHHhcCCccCCCCceEECCCCcchHHHHhhhhcccccccccCCCCCEEEEeCCHHHHHHHHHHHHHcCCcE
Confidence 3568899999987543 6789999999999999988889999999888889999999999999999999999999999
Q ss_pred EEeccccCCCCCcccCCCCeEEEEcCCCcceEEcCCCCEEEEcCCCcHHHHHHHHHHhCCCceeecCCCCCCceEeeecc
Q 048047 78 RVRSGGHDLEGLSSISDVPFIIVDLINFSEISVNAEAKTAWVQSGATVGQLNYRIAEKSQNLLAFPVGTCPGVAVGGHFS 157 (466)
Q Consensus 78 ~vr~gGh~~~g~s~~~~~~~~~idl~~l~~v~~d~~~~~~~vg~G~~~~~v~~~l~~~g~~~l~~~~G~~~~vg~gG~~l 157 (466)
.||||||++.+.+...+.++++|||++||+|++|++.++|+||+|++|++|+++|.++|.+ |++++|.|++||+||+++
T Consensus 81 ~vrggGh~~~g~~~~~~~~gvvIdl~~l~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~g-l~~~~G~~~~vgvgG~~~ 159 (518)
T 3vte_A 81 RTRSGGHDAEGMSYISQVPFVVVDLRNMHSIKIDVHSQTAWVEAGATLGEVYYWINEKNEN-LSFPGGYCPTVGVGGHFS 159 (518)
T ss_dssp EEESSCCCTTCTTTCCSSSEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCTT-EECCCCSCTTCBHHHHHH
T ss_pred EEECCCcCCCCCccCCCCCeEEEECCCCceeEEeCCCCEEEEeCCccHHHHHHHHHHhCCC-ceecCCCCCCeeeeeeeC
Confidence 9999999998877433235999999999999999999999999999999999999999864 899999999999999999
Q ss_pred CCCcCCccchh---------------------------hHHHHHhhcCCCceEEEEEEEEEEEecCceeEEEEEecchh-
Q 048047 158 GGGYGALLRKY---------------------------DLFWAIRGGGGPSFGIIISWKIELVDVPSTVTVFAVPRTLE- 209 (466)
Q Consensus 158 gGG~g~~s~~~---------------------------dLfwalrG~g~~~fGvVt~~~~k~~p~~~~~~~~~~~~~~~- 209 (466)
|||+|+++++| |||||+||||+|+|||||+++||++|.|+.+..+.+.+.++
T Consensus 160 gGg~G~~s~~~G~~~D~V~~~evV~adG~iv~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~p~p~~~~~~~~~~~~~~ 239 (518)
T 3vte_A 160 GGGYGALMRNYGLAADNIIDAHLVNVDGKVLDRKSMGEDLFWAIRGGGGENFGIIAAWKIKLVAVPSKSTIFSVKKNMEI 239 (518)
T ss_dssp TCCCCTTHHHHCCGGGGEEEEEEECTTCCEECHHHHCHHHHHHHTTSCGGGTCEEEEEEEECEECCSCEEEEEEEECCCH
T ss_pred CCCCccccCCCCchhheEEEEEEEccCCeEEEeeccccchhhheecccCCCceEEEEEEEEEEeCCCeEEEEEEEecCCH
Confidence 99999999988 99999999855899999999999999998777777776654
Q ss_pred hhHHHHHHHHHHHHHhhcccceeEEEEeec---------CCceEEEEEEEEeCCcccchhhhhhcCCcCCCCcCcceecC
Q 048047 210 QNATMLLHKWQYIADRVHEDLFISPFLYRA---------NSSMVCLFTSLFLGGVDRLLPLMQESFPELGLTKEDCREMS 280 (466)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~G~~~~~~~~~~~~~~~l~~~~~~~~~~~ 280 (466)
+++.+++.+|+++.+++|+++++.+.+... ...+.+.+.++|+|+.+++.+.+++++++++....++.+++
T Consensus 240 ~~~~~~l~~~~~~~~~~p~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~ 319 (518)
T 3vte_A 240 HGLVKLFNKWQNIAYKYDKDLVLMTHFITKNITDNHGKNKTTVHGYFSSIFHGGVDSLVDLMNKSFPELGIKKTDCKEFS 319 (518)
T ss_dssp HHHHHHHHHHHHHGGGSCTTEEEEEEEEEESCC-------CEEEEEEEEEEESCHHHHHHHHHHHCGGGCCCGGGEEEEC
T ss_pred HHHHHHHHHHHHHHHcCCHhHeEEEEEcccCCCCCCCcCCCceEEEEEEEEeCCHHHHhhhhhhhhhhcCCCccceeecc
Confidence 557889999999999999999998876641 12346778899999999998888887888876667788999
Q ss_pred HHHHHHHhcCCC------------------cccccccccccccCCCCHHHHHHHHHHHhccCCCceeEEEEEecCcccCC
Q 048047 281 FIESVVYINGFE------------------IREFFKGKADYVMEPIPKEAFEGLYDLFYKEDPRTYGLLVFFPYGGKMSE 342 (466)
Q Consensus 281 ~~~~~~~~~~~~------------------~~~~~~~~s~~~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~~~~GG~v~~ 342 (466)
|.+.+.++..++ ...+|+.|+.|+.++++++.++.+++.+.+.+.. .+.+.+.++||++++
T Consensus 320 w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~ks~~~~~~l~~~~i~~l~~~~~~~~~~-~~~v~~~~~GGa~~~ 398 (518)
T 3vte_A 320 WIDTTIFYSGVVNFNTANFKKEILLDRSAGKKTAFSIKLDYVKKPIPETAMVKILEKLYEEDVG-AGMYVLYPYGGIMEE 398 (518)
T ss_dssp HHHHHHHTSSSCCC-----CGGGGGCTTCSCCBEEEEEEEEESSCCCHHHHHHHHHGGGGSCTT-TEEEEEEECCGGGGT
T ss_pred hhhhhhhhhcCCccCCccchhhhhccCCcCcccceeeechhcccCCCHHHHHHHHHHHHhCCCC-CeEEEEeecCccccC
Confidence 999877654321 1235678999998899999999999988764332 468899999999999
Q ss_pred CCCCCCCCcccCCceEEEEEEEEeCCCChHhHHHHHHHHHHHHHcccccccCCCCcccccccCCccC-CCCCCCCCchhc
Q 048047 343 TSESEIPFPHRAGNIYTLLYYADWQDATDEASQRHKNMLNKLFNYMTPYVAKNPRTAYINYRDLDIG-TNNKLGDTSVQE 421 (466)
Q Consensus 343 v~~~~tAf~~R~~~~~~v~~~~~W~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~g~Y~Ny~d~~~~-~~~~~~~~~~~~ 421 (466)
+++++|||+||++..|.+++.+.|.++. .++++.+|++++++.|.||.+..+.++|+||.|.+++ .+ ..++++++.
T Consensus 399 v~~~~TAf~hR~~~~~~~~~~~~w~~~~--~~~~~~~w~~~~~~~~~p~~~~~~~g~YvNy~D~dl~~~~-~~~~~~~~~ 475 (518)
T 3vte_A 399 ISESAIPFPHRAGIMYELWYTASWEKQE--DNEKHINWVRSVYNFTTPYVSQNPRLAYLNYRDLDLGKTN-HASPNNYTQ 475 (518)
T ss_dssp SCTTSSSCCCCTTCCEEEEEEEEECCTT--THHHHHHHHHHHHHHTGGGSCCTTCCCCTTSCCGGGCCCC-TTSCCCHHH
T ss_pred CCCCCCcccccCcceEEEEEEEecCCcc--hhHHHHHHHHHHHHHhccccCCCCccccccCCCccccccc-cccccchhh
Confidence 9999999999995489999999997653 5668899999999999998655567999999998875 21 124455666
Q ss_pred hhhhhhhhccccHHHHHHhhhccCCCCCcccCCCCCCcCC
Q 048047 422 AGVWGKKYFKNNFYRLVHVKTMVDPENFFRNEQSIPPFNL 461 (466)
Q Consensus 422 ~~~~~~~yyg~n~~RL~~IK~kYDP~nvF~~~~~I~~~~~ 461 (466)
+..|+++|||+||+||++||+||||+|||+++|||+|.+.
T Consensus 476 ~~~w~~~Yyg~N~~RL~~vK~~yDP~n~F~~~QsI~p~~~ 515 (518)
T 3vte_A 476 ARIWGEKYFGKNFNRLVKVKTKVDPNNFFRNEQSIPPLPP 515 (518)
T ss_dssp HHHHHHHHSSTHHHHHHHHHHHHCTTCCSCCTTCCCCCCT
T ss_pred hhhHHHHHhHhHHHHHHHHHhhcCchhcccCCCCCCCCCC
Confidence 6789999999999999999999999999999999998653
No 2
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=100.00 E-value=3.4e-82 Score=660.25 Aligned_cols=450 Identities=41% Similarity=0.752 Sum_probs=385.7
Q ss_pred hHHHHHhhcCCCCCceEEcCCCCCchHHhhhcccccccCCCCCCCCCEEEecCCHHHHHHHHHHHHhcCCcEEEeccccC
Q 048047 6 NFLKCLSLQSDTISKVIYTQNNSSYSSVLKSSIQNLVFSTPTNQKPPFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHD 85 (466)
Q Consensus 6 ~~~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dV~~~v~~a~~~~~~~~vr~gGh~ 85 (466)
+|.+||+.....-++.|++|+|++|++++.++.+|.||+......|.+||+|+|++||+++|++|+++++|+.||||||+
T Consensus 1 ~~~~cl~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrGgGh~ 80 (495)
T 3fw9_A 1 DLLSCLTFNGVRNHTVFSADSDSDFNRFLHLSIQNPLFQNSLISKPSAIILPGSKEELSNTIRCIRKGSWTIRLRSGGHS 80 (495)
T ss_dssp CHHHHHHHTTCCCEEECCCCTTCHHHHHHHHTCCCGGGCSTTSCCCSEEECCCSHHHHHHHHHHHHTSSCEEEEESSCCC
T ss_pred ChhHHHhhcCCCCCCeEECCCCCchHHHHhhhhhhcccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEECCCcC
Confidence 58999988654336889999999999998788999999998889999999999999999999999999999999999999
Q ss_pred CCCCcccCCCCeEEEEcCCCcceEEcCCCCEEEEcCCCcHHHHHHHHHHhCCCceeecCCCCCCceEeeeccCCCcCCcc
Q 048047 86 LEGLSSISDVPFIIVDLINFSEISVNAEAKTAWVQSGATVGQLNYRIAEKSQNLLAFPVGTCPGVAVGGHFSGGGYGALL 165 (466)
Q Consensus 86 ~~g~s~~~~~~~~~idl~~l~~v~~d~~~~~~~vg~G~~~~~v~~~l~~~g~~~l~~~~G~~~~vg~gG~~lgGG~g~~s 165 (466)
+.|.+...+.++++|||++||+|++|++.++|+||+|+++++|+++|.+++. ||++++|.|++||+||+++|||+|.++
T Consensus 81 ~~g~~~~~~~ggvvIdl~~m~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~-gl~~~~G~~~~vgigG~~~gGg~G~~~ 159 (495)
T 3fw9_A 81 YEGLSYTSDTPFILIDLMNLNRVSIDLESETAWVESGSTLGELYYAITESSS-KLGFTAGWCPTVGTGGHISGGGFGMMS 159 (495)
T ss_dssp TTCTTSCCSSCEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCS-SEECCCCSCTTCBHHHHHHTCCCCTTH
T ss_pred CCCccccCCCCeEEEECCCCCcEEEeCCCCEEEEcCCCCHHHHHHHHHHhcC-CceeccCCCCCCeEeeeccCCCCcccc
Confidence 9888776443589999999999999999999999999999999999999965 389999999999999999999999999
Q ss_pred chh---------------------------hHHHHHhhcCCCceEEEEEEEEEEEecCceeEEEEEecchh-hhHHHHHH
Q 048047 166 RKY---------------------------DLFWAIRGGGGPSFGIIISWKIELVDVPSTVTVFAVPRTLE-QNATMLLH 217 (466)
Q Consensus 166 ~~~---------------------------dLfwalrG~g~~~fGvVt~~~~k~~p~~~~~~~~~~~~~~~-~~~~~~~~ 217 (466)
++| |||||+||||+|+|||||+++||++|.|+.+..+.+.+.++ +++.+++.
T Consensus 160 ~~~G~~~D~v~~~~vV~adG~i~~~~~~~~DLf~a~rGg~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~a~~~l~ 239 (495)
T 3fw9_A 160 RKYGLAADNVVDAILIDANGAILDRQAMGEDVFWAIRGGGGGVWGAIYAWKIKLLPVPEKVTVFRVTKNVAIDEATSLLH 239 (495)
T ss_dssp HHHCCGGGGEEEEEEECTTCCEECHHHHCHHHHHHHTTSCTTSSCEEEEEEEECEECCSSEEEEEEEEEECHHHHHHHHH
T ss_pred cCCCchhheEEEEEEEcCCCCEEEcCCCChhhhhhhhcccCCCcEEEEEEEEEEEeCCCeEEEEEEeecCcHHHHHHHHH
Confidence 888 99999999665899999999999999998777777776653 55788999
Q ss_pred HHHHHHHhhcccceeEEEEeecCCceEEEEEEEEeCCcccchhhhhhcCCcCCCCcCcceecCHHHHHHHhcCCC-----
Q 048047 218 KWQYIADRVHEDLFISPFLYRANSSMVCLFTSLFLGGVDRLLPLMQESFPELGLTKEDCREMSFIESVVYINGFE----- 292 (466)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----- 292 (466)
+|+++++++|+++++.+......+.+.+.+.++|+|+.+++.+.+++.+++++.....+.++||.+.+.++...+
T Consensus 240 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~l 319 (495)
T 3fw9_A 240 KWQFVAEELEEDFTLSVLGGADEKQVWLTMLGFHFGLKTVAKSTFDLLFPELGLVEEDYLEMSWGESFAYLAGLETVSQL 319 (495)
T ss_dssp HHHHHHHHSCTTEEEEEEEEEETTEEEEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHHHHHHHTTCSCGGGG
T ss_pred HHHHHHhcCChhHeEEEEEcCCCCceEEEEEEEEeCCHHHHHHHHHHhhhhcCCCccceEEcCHHHHHHHHhcccchhhh
Confidence 999999999999998876543234556788899999999888888877788876667789999999876653221
Q ss_pred -------cccccccccccccCCCCHHHHHHHHHHHhccCCCceeEEEEEecCcccCCCCCCCCCCcccCCceEEEEEEEE
Q 048047 293 -------IREFFKGKADYVMEPIPKEAFEGLYDLFYKEDPRTYGLLVFFPYGGKMSETSESEIPFPHRAGNIYTLLYYAD 365 (466)
Q Consensus 293 -------~~~~~~~~s~~~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~~~~GG~v~~v~~~~tAf~~R~~~~~~v~~~~~ 365 (466)
...+|+.|+.++.+++++++++.+++.+.+.+. ..+.++++||+++++++++|||+||++..|.+++.+.
T Consensus 320 ~~~~~~~~~~~~~~ks~~~~~~l~~~~i~~l~~~~~~~~~---~~~~~~~~GGa~~~v~~~~TAf~hR~~~~~~~~~~~~ 396 (495)
T 3fw9_A 320 NNRFLKFDERAFKTKVDLTKEPLPSKAFYGLLERLSKEPN---GFIALNGFGGQMSKISSDFTPFPHRSGTRLMVEYIVA 396 (495)
T ss_dssp GCTTSCSCCCEEEEEEEECSSCCCHHHHHHHHHHHHHCTT---EEEEEEECCGGGGTSCTTTSSCCCCTTCCEEEEEEEE
T ss_pred cCCCCCccCcceeEeehhhcCCCCHHHHHHHHHHHhhCCC---cEEEecccCCccccCCCCCCCccccCccceEEEEEEe
Confidence 125678899999889999999999998876543 5788999999999999999999999855899999999
Q ss_pred eCCCChHhHHHHHHHHHHHHHcccccccCCCCcccccccCCccCCCCCC----CCCchhchhhhhhhhccccHHHHHHhh
Q 048047 366 WQDATDEASQRHKNMLNKLFNYMTPYVAKNPRTAYINYRDLDIGTNNKL----GDTSVQEAGVWGKKYFKNNFYRLVHVK 441 (466)
Q Consensus 366 W~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~g~Y~Ny~d~~~~~~~~~----~~~~~~~~~~~~~~yyg~n~~RL~~IK 441 (466)
|.++.++.++++.+|++++++.|.||..+.+.++|+||.|.+++.++.. ++++++++..|+++|||+||+||++||
T Consensus 397 w~~~~~~~~~~~~~w~~~~~~~~~p~~~~~~~~~Y~Ny~d~dl~~~~~~~~~~~~~~~~~~~~w~~~Yyg~n~~RL~~vK 476 (495)
T 3fw9_A 397 WNQSEQKKKTEFLDWLEKVYEFMKPFVSKNPRLGYVNHIDLDLGGIDWGNKTVVNNAIEISRSWGESYFLSNYERLIRAK 476 (495)
T ss_dssp ECGGGGGGHHHHHHHHHHHHHHHGGGSCCSSCCCCGGGCCGGGCCCCTTCHHHHHTHHHHHHHHHHHHHGGGHHHHHHHH
T ss_pred cCCCCcchhHHHHHHHHHHHHHHhhhccCCCcccccCccCccccccccccccccccccchhhhhHHHHhHhHHHHHHHHH
Confidence 9764334567889999999999999975556789999999887521000 013344456799999999999999999
Q ss_pred hccCCCCCcccCCCCCCc
Q 048047 442 TMVDPENFFRNEQSIPPF 459 (466)
Q Consensus 442 ~kYDP~nvF~~~~~I~~~ 459 (466)
+||||+|||+++|||+|.
T Consensus 477 ~~yDP~n~F~~~qsI~p~ 494 (495)
T 3fw9_A 477 TLIDPNNVFNHPQSIPPM 494 (495)
T ss_dssp HHHCTTCCSCCTTCCCCC
T ss_pred HhhCcHhhCCCCCCCCCC
Confidence 999999999999999984
No 3
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=100.00 E-value=7.2e-78 Score=632.86 Aligned_cols=448 Identities=44% Similarity=0.849 Sum_probs=371.9
Q ss_pred chhhHHHHHhhcCCCCCceEEcCCCCCchHHhhhcccccccCCCCCCCCCEEEecCCHHHHHHHHHHHHhcCCcEEEecc
Q 048047 3 NHENFLKCLSLQSDTISKVIYTQNNSSYSSVLKSSIQNLVFSTPTNQKPPFIITPFHVSEIQAAIKCSKKSGLQIRVRSG 82 (466)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dV~~~v~~a~~~~~~~~vr~g 82 (466)
.+++|.+||.+.+ -++.|++|+|+.|.+.+.++.+|.||+.....+|.+||+|+|++||+++|+||+++++||+||||
T Consensus 7 ~~~~f~~~L~~~~--~~~~v~~~~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~p~~~~~v~~~v~~a~~~~~~~~~r~g 84 (500)
T 3tsh_A 7 AKEDFLGCLVKEI--PPRLLYAKSSPAYPSVLGQTIRNSRWSSPDNVKPLYIITPTQVSHIQSAVVCGRRHSVRIRVRSG 84 (500)
T ss_dssp --CHHHHHHHHHS--CGGGEEETTSTTHHHHHHTTCCCTTTTSTTSCCCSEEECCSSHHHHHHHHHHHHHTTCEEEEESS
T ss_pred cHHHHHHHHHhhC--CCCEEECCCCCccHHHHHhhhccccccCCCCCCceEEEEcCCHHHHHHHHHHHHHCCCcEEEEcC
Confidence 5789999999876 24678899999999999999999999998889999999999999999999999999999999999
Q ss_pred ccCCCCCcccC--CCCeEEEEcCCCcceEEcCCCCEEEEcCCCcHHHHHHHHHHhCCCceeecCCCCCCceEeeeccCCC
Q 048047 83 GHDLEGLSSIS--DVPFIIVDLINFSEISVNAEAKTAWVQSGATVGQLNYRIAEKSQNLLAFPVGTCPGVAVGGHFSGGG 160 (466)
Q Consensus 83 Gh~~~g~s~~~--~~~~~~idl~~l~~v~~d~~~~~~~vg~G~~~~~v~~~l~~~g~~~l~~~~G~~~~vg~gG~~lgGG 160 (466)
||++.|.|.+. .+++++|||++||+|++|++.++|+||+|++|+||+++|.++|.. +++++|+|++||+||+++|||
T Consensus 85 Gh~~~g~s~~~~~~~~~~~idl~~~~~v~~d~~~~~~~v~~G~~~~~~~~~l~~~g~~-~~~~~g~~~~vgvgG~~~~gg 163 (500)
T 3tsh_A 85 GHDYEGLSYRSLQPETFAVVDLNKMRAVWVDGKARTAWVDSGAQLGELYYAIYKASPT-LAFPAGVCPTIGVGGNFAGGG 163 (500)
T ss_dssp CCCTTCTTTCCSSSCCEEEEECTTCCCEEEETTTTEEEEETTSBHHHHHHHHHHHCTT-EECCCCSSTTSBHHHHHHTCC
T ss_pred CcCCCCCcCCCCCcCCeEEEECcCCCCEEECCCCCEEEEccCcCHHHHHHHHHHhCCC-cccCCCCCCCceecCcccccc
Confidence 99998876532 135899999999999999999999999999999999999999976 889999999999999999999
Q ss_pred cCCccchh---------------------------hHHHHHhhcCCCceEEEEEEEEEEEecCceeEEEEEecchhhhHH
Q 048047 161 YGALLRKY---------------------------DLFWAIRGGGGPSFGIIISWKIELVDVPSTVTVFAVPRTLEQNAT 213 (466)
Q Consensus 161 ~g~~s~~~---------------------------dLfwalrG~g~~~fGvVt~~~~k~~p~~~~~~~~~~~~~~~~~~~ 213 (466)
+|+++++| |||||+||||+|||||||++|+|++|.|+.+..+...+...+.+.
T Consensus 164 ~g~~~~~~G~~~d~v~~~~vV~a~G~i~~~~~~~~dl~~a~~gg~gg~fGvvt~~~~~~~p~p~~~~~~~~~~~~~~~~~ 243 (500)
T 3tsh_A 164 FGMLLRKYGIAAENVIDVKLVDANGKLHDKKSMGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFKISKTVSEGAV 243 (500)
T ss_dssp CCTTHHHHCCGGGGEEEEEEECTTSCEECHHHHCHHHHHHHTTSCSSTTCEEEEEEEECEECCSCEEEEEEEEETTTTHH
T ss_pred CCccccccCChhhheeeEEEECCCceEEECCCCChHHHHHHHhhcccceEEEEEEEEEEEeCCCeEEEEEEecCcHHHHH
Confidence 99999999 999999988879999999999999999997777776666555677
Q ss_pred HHHHHHHHHHHhhcccceeEEEEeecCCceEEEEEEEEeCCcccchhhhhhcCCcCCCCcCcceecCHHHHHHHhcCC--
Q 048047 214 MLLHKWQYIADRVHEDLFISPFLYRANSSMVCLFTSLFLGGVDRLLPLMQESFPELGLTKEDCREMSFIESVVYINGF-- 291 (466)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-- 291 (466)
+++.+|+.+.+++|+++...+.... +...+..+|+|+.++..+.+.+.+++++.....+..++|.+...+....
T Consensus 244 ~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 319 (500)
T 3tsh_A 244 DIINKWQVVAPQLPADLMIRIIAQG----PKATFEAMYLGTCKTLTPLMSSKFPELGMNPSHCNEMSWIQSIPFVHLGHR 319 (500)
T ss_dssp HHHHHHHHHGGGSCTTEEEEEEESS----SEEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHHHHHHHHHCCS
T ss_pred HHHHHHHHhhhccChhhEEEEEecC----CCcEEEEEEecchhhhhhhhhhcchhccCCccccchhhhhccchhhhhccc
Confidence 8899999999999998877665432 3556678899998887777777777777666666777887754332100
Q ss_pred ------------CcccccccccccccCCCCHHHHHHHHHHHhccCCCceeEEEEEecCcccCCCCCCCCCCcccCCceEE
Q 048047 292 ------------EIREFFKGKADYVMEPIPKEAFEGLYDLFYKEDPRTYGLLVFFPYGGKMSETSESEIPFPHRAGNIYT 359 (466)
Q Consensus 292 ------------~~~~~~~~~s~~~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~~~~GG~v~~v~~~~tAf~~R~~~~~~ 359 (466)
....+.+.++.++.++++++.++.+++.+...+. ...+.++++||++.++++++|+|+||++.++.
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Gga~~~~~~~ata~~~R~~~l~~ 397 (500)
T 3tsh_A 320 DALEDDLLNRQNSFKPFAEYKSDYVYQPFPKTVWEQILNTWLVKPG--AGIMIFDPYGATISATPESATPFPHRKGVLFN 397 (500)
T ss_dssp SCHHHHHHCCCCCCCCEEEEEEEEECSCCCHHHHHHHHHTGGGSTT--CCEEEEEECCHHHHHSCTTSSSCCCCTTCCEE
T ss_pred cccccccccccccccchhhhhhhhhcccCcHHHHHHHHHHhhcCCC--ceEEEEcccCccccCCCCccCcCcccCCcEEE
Confidence 0012234456667778999988888887665443 24677889999999999999999999976789
Q ss_pred EEEEEEeCCCChHhHHHHHHHHHHHHHcccccccCCCCcccccccCCccCCCCCCC-CCchhchhhhhhhhccccHHHHH
Q 048047 360 LLYYADWQDATDEASQRHKNMLNKLFNYMTPYVAKNPRTAYINYRDLDIGTNNKLG-DTSVQEAGVWGKKYFKNNFYRLV 438 (466)
Q Consensus 360 v~~~~~W~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~g~Y~Ny~d~~~~~~~~~~-~~~~~~~~~~~~~yyg~n~~RL~ 438 (466)
+++...|.++. .+++..+|++++++.+.++....+.++|+||+|.+++.+...+ ...+.....|++.|||+||+||+
T Consensus 398 i~~~~~w~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~aY~Ny~D~dlg~~~~~~~~~~~~~~~~w~~~Y~g~Ny~RL~ 475 (500)
T 3tsh_A 398 IQYVNYWFAPG--AAAAPLSWSKDIYNYMEPYVSKNPRQAYANYRDIDLGRNEVVNDVSTYASGKVWGQKYFKGNFERLA 475 (500)
T ss_dssp EEEEEEECSTT--CCHHHHHHHHHHHHHHGGGSCCSSCCCCTTSCCGGGCCCCEETTEECHHHHHHHHHHHHGGGHHHHH
T ss_pred EEEEEecCCcc--hhHHHHHHHHHHHHHHHHHhcCCCCeEEeccccccccccccccccccccccchHHHHhhhHHHHHHH
Confidence 99999998875 4567789999999999998766677899999998875321100 12233446899999999999999
Q ss_pred HhhhccCCCCCcccCCCCCCcCC
Q 048047 439 HVKTMVDPENFFRNEQSIPPFNL 461 (466)
Q Consensus 439 ~IK~kYDP~nvF~~~~~I~~~~~ 461 (466)
+||+||||+|||+++|||+|..+
T Consensus 476 ~IK~kyDP~nvF~~~qsI~Pl~~ 498 (500)
T 3tsh_A 476 ITKGKVDPTDYFRNEQSIPPLIK 498 (500)
T ss_dssp HHHHHHCTTCCSCCTTSCCCCCC
T ss_pred HHHHHhCcccccCCCCCCCCCCC
Confidence 99999999999999999999764
No 4
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=100.00 E-value=3.3e-72 Score=583.81 Aligned_cols=422 Identities=25% Similarity=0.418 Sum_probs=343.5
Q ss_pred hHHHHHhhcCCCCCceEEcCCCCCchHHhhhcccccccCCCCCCCCCEEEecCCHHHHHHHHHHHHhcCCcEEEeccccC
Q 048047 6 NFLKCLSLQSDTISKVIYTQNNSSYSSVLKSSIQNLVFSTPTNQKPPFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHD 85 (466)
Q Consensus 6 ~~~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dV~~~v~~a~~~~~~~~vr~gGh~ 85 (466)
+|++||.+.. ..|++|+|+.|++... .||.|+ ...|.+||+|+|++||+++|++|+++++||.||||||+
T Consensus 2 ~l~~cl~~~~----~~v~~p~~~~y~~~~~--~~n~~~----~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~ 71 (473)
T 3rja_A 2 AIEACLSAAG----VPIDIPGTADYERDVE--PFNIRL----PYIPTAIAQTQTTAHIQSAVQCAKKLNLKVSAKSGGHS 71 (473)
T ss_dssp HHHHHHHHTT----CCBCCTTSHHHHHHTC--CSBTTS----CCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSCCC
T ss_pred hHHHHHHhCC----CcEECCCCCchHHHHH--Hhhccc----CCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEcCCCC
Confidence 6899999853 3599999999998853 445554 46899999999999999999999999999999999999
Q ss_pred CCCCcccCCCCeEEEEcCCCcceE-EcCCCCEEEEcCCCcHHHHHHHHHHhCCCceeecCCCCCCceEeeeccCCCcCCc
Q 048047 86 LEGLSSISDVPFIIVDLINFSEIS-VNAEAKTAWVQSGATVGQLNYRIAEKSQNLLAFPVGTCPGVAVGGHFSGGGYGAL 164 (466)
Q Consensus 86 ~~g~s~~~~~~~~~idl~~l~~v~-~d~~~~~~~vg~G~~~~~v~~~l~~~g~~~l~~~~G~~~~vg~gG~~lgGG~g~~ 164 (466)
+.+.+....+++++|||++||+|. +|++..+|+||+|++|++|+++|.++|. +++|+|.|++||+||+++|||+|++
T Consensus 72 ~~g~~~~~~~~~vvIdl~~~~~i~~vd~~~~~v~v~aG~~~~~l~~~l~~~G~--~~~p~G~~~~vgvgG~~~ggg~G~~ 149 (473)
T 3rja_A 72 YASFGFGGENGHLMVQLDRMIDVISYNDKTGIAHVEPGARLGHLATVLNDKYG--RAISHGTCPGVGISGHFAHGGFGFS 149 (473)
T ss_dssp TTCGGGTSSSSCEEEECTTCCCEEEEETTTTEEEECTTCBHHHHHHHHHHHHS--EECCCCSCTTCBHHHHHHTCCCCTT
T ss_pred CCCCcccCCCCeEEEECCCCCceEEEcCCCCEEEECCCCCHHHHHHHHHHcCC--EEeccCCCCCcEeeeeccCCCCCcc
Confidence 986554332358999999999998 9999999999999999999999999983 6899999999999999999999999
Q ss_pred cchh----------------------------hHHHHHhhcCCCceEEEEEEEEEEEecCceeEEEEEecchh-h-hHHH
Q 048047 165 LRKY----------------------------DLFWAIRGGGGPSFGIIISWKIELVDVPSTVTVFAVPRTLE-Q-NATM 214 (466)
Q Consensus 165 s~~~----------------------------dLfwalrG~g~~~fGvVt~~~~k~~p~~~~~~~~~~~~~~~-~-~~~~ 214 (466)
+++| |||||+|||| |+|||||+++||++|.|+....+.+.+.++ . ++.+
T Consensus 150 ~~~~G~~~D~v~~~~vV~a~G~v~~~~~~~~~dLf~a~rG~~-g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~ 228 (473)
T 3rja_A 150 SHMHGLAVDSVVGVTVVLADGRIVEASATENADLFWGIKGAG-SNFGIVAVWKLATFPAPKVLTRFGVTLNWKNKTSALK 228 (473)
T ss_dssp HHHHCCGGGGEEEEEEECTTSCEEEEETTBSHHHHHHHHHHG-GGTCEEEEEEEECEECCSCEEEEEEECCCCSHHHHHH
T ss_pred cccccchHhheeeEEEEecCCeEEEeCCCCCcchhhcccCCC-CceEEEEEEEEEEEeCCCceEEEEEEecCccHHHHHH
Confidence 9888 9999999998 899999999999999998777777777664 3 4688
Q ss_pred HHHHHHHHHH-hhcccceeEEEEeecCCceEEEEEEEEeCCcccchhhhhhcCCcCC-CCcCcce-ecCHHHHHHHhcCC
Q 048047 215 LLHKWQYIAD-RVHEDLFISPFLYRANSSMVCLFTSLFLGGVDRLLPLMQESFPELG-LTKEDCR-EMSFIESVVYINGF 291 (466)
Q Consensus 215 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~l~-~~~~~~~-~~~~~~~~~~~~~~ 291 (466)
++++|+++.. ++|+++++.+.+. ... .+.+.++|+|+.+++.+.+++++...+ +...++. +++|.+.+.++...
T Consensus 229 ~~~~~~~~~~~~~p~~l~~~~~~~-~~~--~~~~~~~~~G~~~~~~~~l~pl~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 305 (473)
T 3rja_A 229 GIEAVEDYARWVAPREVNFRIGDY-GAG--NPGIEGLYYGTPEQWRAAFQPLLDTLPAGYVVNPTTSLNWIESVLSYSNF 305 (473)
T ss_dssp HHHHHHHHHHHTCCTTEEEEEEES-SSS--CCEEEEEEESCHHHHHHHHHHHHTTSCTTCEECCCEEECHHHHHHHTSSS
T ss_pred HHHHHHHHhhhCCChhHEEEEEEc-CCC--cEEEEEEecCCHHHHHHHHHHHHHhCCCCcceeeecccCHHHHHHhhhcC
Confidence 9999999987 8999999888765 212 266778999999999888887543333 3445677 89999987655421
Q ss_pred ----Cc----ccccccccccccCCCCHHHHHHHHHHHhccCC-C--ceeEEEEEecCc---ccCCCCCCCCCCcccCCce
Q 048047 292 ----EI----REFFKGKADYVMEPIPKEAFEGLYDLFYKEDP-R--TYGLLVFFPYGG---KMSETSESEIPFPHRAGNI 357 (466)
Q Consensus 292 ----~~----~~~~~~~s~~~~~~l~~~~i~~i~~~~~~~~~-~--~~~~~~~~~~GG---~v~~v~~~~tAf~~R~~~~ 357 (466)
+. ...++.++.+. +++++++++.+++.+.+..+ . ..+.++++++|| +++++++++|||+||+ ..
T Consensus 306 ~~~~~~~~~~~~~~~~ks~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~ai~~v~~~~TAf~hR~-~~ 383 (473)
T 3rja_A 306 DHVDFITPQPVENFYAKSLTL-KSIKGDAVKNFVDYYFDVSNKVKDRFWFYQLDVHGGKNSQVTKVTNAETAYPHRD-KL 383 (473)
T ss_dssp SCCCCSSCCCCBEEEEEEEEE-SCCTTHHHHHHHHHHHHTGGGCCSSEEEEEEEECCSTTCGGGGSCTTTSSCCCTT-CS
T ss_pred CCcccccCCCCCcceEecccc-CCCCHHHHHHHHHHHHhcCCCCCCcceEEEEEecCCcchhhcCCCCCCCccccCC-cc
Confidence 10 23466777775 57999999999998865321 1 234678999998 6788899999999999 58
Q ss_pred EEEEEEEEeCC-CChHhHHHHHHHHHHHHHcccccccCCCCcccccccCCccCCCCCCCCCchhchhhhhhhhccccHHH
Q 048047 358 YTLLYYADWQD-ATDEASQRHKNMLNKLFNYMTPYVAKNPRTAYINYRDLDIGTNNKLGDTSVQEAGVWGKKYFKNNFYR 436 (466)
Q Consensus 358 ~~v~~~~~W~~-~~~~~~~~~~~w~~~~~~~l~~~~~~~~~g~Y~Ny~d~~~~~~~~~~~~~~~~~~~~~~~yyg~n~~R 436 (466)
|.+++...|.+ +. .++...+|+++.++.+.+.......++|+||+|.+++ .+.|++.|||+||+|
T Consensus 384 ~~~~~~~~w~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~YvNy~d~~~~------------~~~~~~~yyg~n~~R 449 (473)
T 3rja_A 384 WLIQFYDRYDNNQT--YPETSFKFLDGWVNSVTKALPKSDWGMYINYADPRMD------------RDYATKVYYGENLAR 449 (473)
T ss_dssp EEEEEEEEECTTSC--CCTTTHHHHHHHHHHHHTTSCGGGEECCGGGCCCSSC------------HHHHHHHHHGGGHHH
T ss_pred EEEEEEEEeCCCCc--cchHHHHHHHHHHHHHHhhCCCCCCceEecCCCcccc------------chhHHHHHHHHHHHH
Confidence 99999999963 32 2234457777766666444322345899999998764 146999999999999
Q ss_pred HHHhhhccCCCCCcccCCCCCCc
Q 048047 437 LVHVKTMVDPENFFRNEQSIPPF 459 (466)
Q Consensus 437 L~~IK~kYDP~nvF~~~~~I~~~ 459 (466)
|++||+||||+|+|+++|||+|.
T Consensus 450 L~~vK~kyDP~n~F~~~qsI~p~ 472 (473)
T 3rja_A 450 LQKLKAKFDPTDRFYYPQAVRPV 472 (473)
T ss_dssp HHHHHHHHCTTCTTCCTTSCCCC
T ss_pred HHHHhhccCchhhCCCCcCCCCC
Confidence 99999999999999999999985
No 5
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=100.00 E-value=3.2e-71 Score=578.85 Aligned_cols=423 Identities=23% Similarity=0.379 Sum_probs=333.0
Q ss_pred CCCCCceEEcCCCCCchHHhhhcccccccCCCCCCCCCEEEecCCHHHHHHHHHHHHhcCCcEEEeccccCCCCCcccCC
Q 048047 15 SDTISKVIYTQNNSSYSSVLKSSIQNLVFSTPTNQKPPFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGLSSISD 94 (466)
Q Consensus 15 ~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dV~~~v~~a~~~~~~~~vr~gGh~~~g~s~~~~ 94 (466)
.+++++.|++|+|++|++++. .||.||. ..|.+||+|+|++||+++|++|+++++||.||||||++.+.+...+
T Consensus 5 ~~s~~~~~~~p~~~~y~~~~~--~~n~~~~----~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrggGh~~~g~~~~~~ 78 (501)
T 3pop_A 5 TASVPPFTVGREDPRYIELSH--SDNHRFV----VEPEEFFLPATPDDVVASLQKAVTEGRGVACRSGGHCGQDFVGTPR 78 (501)
T ss_dssp ----CCEEEETTSTTHHHHTC--CSCTTSC----CCCSEEEECSSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTSSC
T ss_pred cccCCCceECCCCcchHHHHH--HHhhccC----CCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEeCCccCCCccccCC
Confidence 456789999999999999863 5677764 5899999999999999999999999999999999999988776532
Q ss_pred CCeEEEEcCCCcceEEcCCCCEEEEcCCCcHHHHHHHHHH-hCCCceeecCCCCCCceEeeeccCCCcCCccchh-----
Q 048047 95 VPFIIVDLINFSEISVNAEAKTAWVQSGATVGQLNYRIAE-KSQNLLAFPVGTCPGVAVGGHFSGGGYGALLRKY----- 168 (466)
Q Consensus 95 ~~~~~idl~~l~~v~~d~~~~~~~vg~G~~~~~v~~~l~~-~g~~~l~~~~G~~~~vg~gG~~lgGG~g~~s~~~----- 168 (466)
++++|||++||+|++|++.++|+||+|++|++|+++|.+ +| +++++|.|++||+||+++|||+|+++++|
T Consensus 79 -~gvvIdl~~l~~i~vd~~~~~v~v~aG~~~~~l~~~l~~~~G---l~~~~G~~~~vgvgG~~~gGg~G~~~~~~G~~~D 154 (501)
T 3pop_A 79 -RDLVLDLHNLHAIGPAADGAGVRVGSGATVDQVQKALFRRWN---AALPLGACSAVGMGGLVAGGGYGPLSRQLGLVVD 154 (501)
T ss_dssp -CSEEEECTTCCCEEECTTSSSEEEETTCBHHHHHHHHHHHHS---BCCCCCSBTTCBHHHHHHHCCCCTTHHHHCCGGG
T ss_pred -CEEEEEecccCCeEEcCCCCEEEEECCcCHHHHHHHHHhhcC---eEeCCCCCCCceEeeccccCCCcccccccccHHH
Confidence 489999999999999999999999999999999999974 66 57999999999999999999999887777
Q ss_pred ------------------------------hHHHHHhhcCCCceEEEEEEEEEE----------EecC-ceeEEEEEecc
Q 048047 169 ------------------------------DLFWAIRGGGGPSFGIIISWKIEL----------VDVP-STVTVFAVPRT 207 (466)
Q Consensus 169 ------------------------------dLfwalrG~g~~~fGvVt~~~~k~----------~p~~-~~~~~~~~~~~ 207 (466)
|||||+||||+|+|||||+++||+ +|.+ ..++.+.+.|+
T Consensus 155 ~v~~~evV~~da~G~~~~v~~~~~~~~~~~DLf~a~rG~G~g~fGIVt~~~lk~~~~~~~~~~~~p~~~~~v~~~~~~~~ 234 (501)
T 3pop_A 155 HLHAVEVAVVDESRTVRLVTARADDTGDLGELFWAHTGGGGGNFGVVTAYEFRSPEHLATEPVGLPRAAGRLHVQKVVFP 234 (501)
T ss_dssp GEEEEEEEEECTTSCEEEEEEETTCCHHHHHHHHHTTTSCTTSSCEEEEEEECCCTTTCBTTTTBCBCCSEEEEEEEEEE
T ss_pred hEEEEEEEEecCCCCEEEEEeccCCCCCCccHHHHhhccCCCCcEEEEEEEEEeccccCCChhhcCCCCceEEEEEEEEc
Confidence 899999999668999999999999 7654 35666667665
Q ss_pred hh----hhHHHHHHHHHHHHH--hhcccc----eeEEEEeecCCceEEEEEEEEeCCcccchhhhhhcCCc------CCC
Q 048047 208 LE----QNATMLLHKWQYIAD--RVHEDL----FISPFLYRANSSMVCLFTSLFLGGVDRLLPLMQESFPE------LGL 271 (466)
Q Consensus 208 ~~----~~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~------l~~ 271 (466)
.. +.+.++++.|+++.. ..|++. ...+.+.... .-.+.+..+|.|+.+++.+.+++++.. +.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~~g~~p 313 (501)
T 3pop_A 235 WAMIDETSFVTVMRRFFEWHERHSEPGSPESSLFATFFVNHVS-SGVLQLMVQQDADVDPEGEILARFVASLTEGTGVVG 313 (501)
T ss_dssp GGGCCHHHHHHHHHHHHHHHHHSCCTTCGGGGEEEEEEEECGG-GCEEEEEEEEETTTCTTCHHHHHHHHHHHTTSSCCC
T ss_pred hhhcCHHHHHHHHHHHHHHHhhccCCCccccceEEEEEecCCC-CCeEEEEEEEeCChHHHHHHHHHHHHhhhhccCCCc
Confidence 43 224677888888765 345442 2333332211 113455667889888887777765432 223
Q ss_pred CcCcceecCHHHHHHHhcCCCc-----ccccccccccccCCCCHHHHHHHHHHHhccCCCceeEEEEEecCcccCCCCCC
Q 048047 272 TKEDCREMSFIESVVYINGFEI-----REFFKGKADYVMEPIPKEAFEGLYDLFYKEDPRTYGLLVFFPYGGKMSETSES 346 (466)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~s~~~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~~~~GG~v~~v~~~ 346 (466)
... +.+++|.+...... .+. ..+++.++.++.++++++.++.+++.+....+...+.++++++||++.+++++
T Consensus 314 ~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ks~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~GGav~~v~~~ 391 (501)
T 3pop_A 314 IPR-GGVMSWLTGTRYMS-QADCGDVMGARSASKSAYHRAAPTDEQLSVLHRHLHADHPGQASYVMFNSYGGEINRRGPS 391 (501)
T ss_dssp EEE-EEEEEHHHHHHHTC-BCSCGGGTTCEEEEEEEEESSCCCHHHHHHHHHHHTSSSCCTTEEEEEEECCGGGGGSCTT
T ss_pred cce-eEEeCHHHHHhhhc-CCCCCcccccccceecccccCCCCHHHHHHHHHHHHhcCCCCceEEEEEecCcccccCCCC
Confidence 333 77899998765543 221 23667888898888999999999998876322234678899999999999999
Q ss_pred CCCCcccCCceEEEEEEEEeCCCChHhHHHHHHHHHHHHHcccccccC------CCCcccccccCCccCCCCCCCCCchh
Q 048047 347 EIPFPHRAGNIYTLLYYADWQDATDEASQRHKNMLNKLFNYMTPYVAK------NPRTAYINYRDLDIGTNNKLGDTSVQ 420 (466)
Q Consensus 347 ~tAf~~R~~~~~~v~~~~~W~~~~~~~~~~~~~w~~~~~~~l~~~~~~------~~~g~Y~Ny~d~~~~~~~~~~~~~~~ 420 (466)
+|||+||+ ..|++++...|.++ +.++++.+|++++++.|.++... ...++|+||+|.+++.+. ++++
T Consensus 392 ~TAf~hR~-~~~~~~~~~~w~~~--~~~~~~~~w~~~~~~~~~~~~~g~p~~~~~~~gaYvNy~d~dl~~~~--~~~~-- 464 (501)
T 3pop_A 392 DAAVPQRD-SVVKSSWFSAWQDA--ELDELHLGWLRGLYEEFFAGTGGVPVTGGRTDGCYINYPDADLLDPA--RNRS-- 464 (501)
T ss_dssp TSSCCCCS-CSEEEEEEEEESCG--GGHHHHHHHHHHHHHHHTGGGTTSCCTTSSBCCCCTTSCCGGGGCTT--TCCS--
T ss_pred CCCccCcC-ccEEEEEEEEeCCc--chHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCceeccCCCccccccc--cccc--
Confidence 99999999 58999999999866 35667899999999999766421 246899999998875211 1111
Q ss_pred chhhhhhhhccccHHHHHHhhhccCCCCCcccCCCCCC
Q 048047 421 EAGVWGKKYFKNNFYRLVHVKTMVDPENFFRNEQSIPP 458 (466)
Q Consensus 421 ~~~~~~~~yyg~n~~RL~~IK~kYDP~nvF~~~~~I~~ 458 (466)
+..|++.|||+||+||++||+||||+|+|+++|||+|
T Consensus 465 -~~~w~~~Yyg~N~~RL~~vK~kyDP~n~F~~~qsI~p 501 (501)
T 3pop_A 465 -GEPWHHLYYKDNYARLRSAKRAWDPLNTFHHSMSIGL 501 (501)
T ss_dssp -SCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred -cchHHHHHhHhHHHHHHHHHHHhCcccccCCCCCCCC
Confidence 2349999999999999999999999999999999987
No 6
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=100.00 E-value=9.8e-68 Score=556.64 Aligned_cols=427 Identities=25% Similarity=0.421 Sum_probs=329.7
Q ss_pred HHHhhcCCCCCceEEcCCCCCchHHhhhcccccccCCCCCCCCCEEEecCCHHHHHHHHHHHHhcCCcEEEeccccCCCC
Q 048047 9 KCLSLQSDTISKVIYTQNNSSYSSVLKSSIQNLVFSTPTNQKPPFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEG 88 (466)
Q Consensus 9 ~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dV~~~v~~a~~~~~~~~vr~gGh~~~g 88 (466)
+||.. ....|++|+|+.|++++ ...||.||.. .|.+||+|+|++||+++|++|+++++||.||||||++.+
T Consensus 25 ~~l~~----~~~~v~~p~d~~Y~~~~-~~~~n~~~~~----~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~g 95 (523)
T 2wdx_A 25 RCLPP----AGPVKVTPDDPRYLNLK-LRGANSRFNG----EPDYIHLVGSTQQVADAVEETVRTGKRVAVRSGGHCFED 95 (523)
T ss_dssp -CCCC----CCCEEECTTSTTHHHHH-TCSSCTTCCC----CCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSCCCSSS
T ss_pred hhccc----CCCeEECCCCcchHHHH-hhhhhhcccC----CCCEEEEeCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCC
Confidence 66555 35679999999999986 2467888854 899999999999999999999999999999999999988
Q ss_pred CcccCCCCeEEEEcCCCcceEEcCCCCEEEEcCCCcHHHHHHHHHH-hCCCceeecCCCCCCceEeeeccCCCcCCccch
Q 048047 89 LSSISDVPFIIVDLINFSEISVNAEAKTAWVQSGATVGQLNYRIAE-KSQNLLAFPVGTCPGVAVGGHFSGGGYGALLRK 167 (466)
Q Consensus 89 ~s~~~~~~~~~idl~~l~~v~~d~~~~~~~vg~G~~~~~v~~~l~~-~g~~~l~~~~G~~~~vg~gG~~lgGG~g~~s~~ 167 (466)
.+...+ ++++|||++||+|++|++.++|+||+|++|++|+++|.+ +| +.+++|+|++||+||+++|||+|+++++
T Consensus 96 ~~~~~~-~gvvIdl~~m~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G---l~~~~G~~~~vgvgG~~~gGg~g~~s~~ 171 (523)
T 2wdx_A 96 FVDNPD-VKVIIDMSLLTEIAYDPSMNAFLIEPGNTLSEVYEKLYLGWN---VTIPGGVCGGVGVGGHICGGGYGPLSRQ 171 (523)
T ss_dssp SSSSTT-CCEEEECTTCCCEEEETTTTEEEECTTCBHHHHHHHHHHHHS---CCCCCCCCTTCBHHHHHHHTCCCTTHHH
T ss_pred CccCCC-CeEEEEcccCCCEEEcCCCCEEEEcCCCCHHHHHHHHHHhcC---eEEccCCCCCCeeCccccCCCCCccccc
Confidence 765432 489999999999999999999999999999999999984 87 4699999999999999999999999987
Q ss_pred h-----------------------------------hHHHHHhhcCCCceEEEEEEEEEE-----------EecCc-eeE
Q 048047 168 Y-----------------------------------DLFWAIRGGGGPSFGIIISWKIEL-----------VDVPS-TVT 200 (466)
Q Consensus 168 ~-----------------------------------dLfwalrG~g~~~fGvVt~~~~k~-----------~p~~~-~~~ 200 (466)
| |||||+||||+|||||||+++||+ +|.|+ .++
T Consensus 172 ~G~~~D~v~~~evV~~d~~G~v~~~~~~~~~~~~~~DLf~a~rGgg~g~~GIVt~~~l~l~~~~~~~~~~~~p~~~~~~~ 251 (523)
T 2wdx_A 172 FGSVVDYLYAVEVVVVNKQGKARVIVATRERDDPHHDLWWAHTGGGGGNFGVVTKYWMRVPEDVGRNPERLLPKPPATLL 251 (523)
T ss_dssp HCCGGGGEEEEEEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCSSSSSEEEEEEECCSSCCCSCGGGSSCCCCSEEE
T ss_pred ccChhheEEEEEEEEecCCccEEEEecccccCCCChHHHHHhhccCCCCcEEEEEEEEEeecccCCCcccccCCCcccEE
Confidence 7 499999988768999999999999 99876 455
Q ss_pred EEEEecchh----hhHHHHHHHHHHHHHh--hccc----ceeEEEEeec-CC--ceEEEEEEEEeCCcccchhhhhhcCC
Q 048047 201 VFAVPRTLE----QNATMLLHKWQYIADR--VHED----LFISPFLYRA-NS--SMVCLFTSLFLGGVDRLLPLMQESFP 267 (466)
Q Consensus 201 ~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~-~~--~~~~~~~~~~~G~~~~~~~~~~~~~~ 267 (466)
.+.+.|+.+ +.+.+++++|+++... .|++ +...+.+... .+ .+.+.+..+|.|+.++..+.+++++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~l~~~~~ 331 (523)
T 2wdx_A 252 TSTVTFDWAGMTEAAFSRLLRNHGEWYERNSGPDSPYTGLWSQLMIGNEVPGMGESGFMMPIQVDATRPDARRLLDAHIE 331 (523)
T ss_dssp EEEEECCGGGCCHHHHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEECCCTTCTTCSEEEEEEEETTSTTHHHHHHHHHH
T ss_pred EEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCccccceEEEEEeccCCCCCcceeEEEEEEEeCCHHHHHHHHHHHHH
Confidence 666777642 2246788888888754 4554 2232222221 12 23566677888988777777765322
Q ss_pred ---c-CC-CCcCcceecCHHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHhccCCCceeEEEEEecCcccCC
Q 048047 268 ---E-LG-LTKEDCREMSFIESVVYINGFEIREFFKGKADYVMEPIPKEAFEGLYDLFYKEDPRTYGLLVFFPYGGKMSE 342 (466)
Q Consensus 268 ---~-l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~~~~GG~v~~ 342 (466)
+ ++ +....+..++|.+........ ..+++.++.++.+.++.+.++.+++.+........+.+.++.+||++.+
T Consensus 332 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~v~~ 409 (523)
T 2wdx_A 332 AVIDGVPPAEVPEPIEQRWLASTPGRGGR--GPASKTKAGYLRKRLTDRQIQAVYENMTHMDGIDYGAVWLIGYGGKVNT 409 (523)
T ss_dssp HHHTTCTTCBCCCCEEEETTSSCCCCCSS--CCEEEEEEEEESSCCCHHHHHHHHHHHTCCTTCSEEEEEEEECCGGGGG
T ss_pred HHHhhcCCCccccceeccHHHHHHhhcCC--CCceeeecccccCCCCHHHHHHHHHHHHhcCCCCceEEEEEecCCcccc
Confidence 1 22 333445567776542221111 1245556777766799999999999887543324567788999999999
Q ss_pred CCCCCCCCcccCCceEEEEEEEEeCCCChHhHHHHHHHHHHHHHcccccccC------CCCcccccccCCccCCCCCCCC
Q 048047 343 TSESEIPFPHRAGNIYTLLYYADWQDATDEASQRHKNMLNKLFNYMTPYVAK------NPRTAYINYRDLDIGTNNKLGD 416 (466)
Q Consensus 343 v~~~~tAf~~R~~~~~~v~~~~~W~~~~~~~~~~~~~w~~~~~~~l~~~~~~------~~~g~Y~Ny~d~~~~~~~~~~~ 416 (466)
++.++|+|+||+ ..|++++...|.++. .++...+|++++++.+...... ...++|+||+|.+++. +.++
T Consensus 410 ~~~~~ta~~~R~-~~~~~~~~~~w~~~~--~~~~~~~~~~~~~~~l~~~~~g~p~~~~~~~g~Y~Ny~d~~~~~--~~~~ 484 (523)
T 2wdx_A 410 VDPAATALPQRD-AILKVNYITGWANPG--NEAKHLTWVRKLYADVYAETGGVPVPNDVSDGAYINYPDSDLAD--PGLN 484 (523)
T ss_dssp SCTTTSSCCCCS-CSEEEEEEEEESSGG--GHHHHHHHHHHHHHHHTGGGTTSCCSCSSBCCCCTTSCCGGGGC--TTTC
T ss_pred CCCccccccccC-ceEEEEEEEEcCCCc--cHHHHHHHHHHHHHHHHhhhcCCCccCCCCCcceecCCcccccc--cccc
Confidence 999999999999 589999999998763 4668899999999888732211 1357999999998752 1011
Q ss_pred CchhchhhhhhhhccccHHHHHHhhhccCCCCCcccCCCCCC
Q 048047 417 TSVQEAGVWGKKYFKNNFYRLVHVKTMVDPENFFRNEQSIPP 458 (466)
Q Consensus 417 ~~~~~~~~~~~~yyg~n~~RL~~IK~kYDP~nvF~~~~~I~~ 458 (466)
+++ ..|++.|||+||+||++||+||||+|||+++|+|+|
T Consensus 485 ~s~---~~~~~~yyg~n~~RL~~iK~kyDP~~vF~~~qsI~p 523 (523)
T 2wdx_A 485 TSG---VPWHDLYYKGNHPRLRKVKAAYDPRNHFHHALSIRP 523 (523)
T ss_dssp CSS---CCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred cch---hHHHHHHHHHHHHHHHHHHHHhCcHhhcCCCCCCCC
Confidence 221 248999999999999999999999999999999987
No 7
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=100.00 E-value=7.1e-67 Score=550.24 Aligned_cols=432 Identities=22% Similarity=0.381 Sum_probs=327.3
Q ss_pred hhHHHHHhhcCCCCCceEEcCCCCCchHHhhhcccccccCCCCCCCCCEEEecCCHHHHHHHHHHHHhcCCcEEEecccc
Q 048047 5 ENFLKCLSLQSDTISKVIYTQNNSSYSSVLKSSIQNLVFSTPTNQKPPFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGH 84 (466)
Q Consensus 5 ~~~~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dV~~~v~~a~~~~~~~~vr~gGh 84 (466)
.|-..|+... ...|++|+|++|++++ +..||.||.. .|.+||+|+|++||+++|++|+++++||.||||||
T Consensus 19 ~~~~~~~~~~----~~~v~~p~d~~Y~~~~-~~~~n~~~~~----~p~~vv~p~s~~dv~~~v~~a~~~~~~~~vrggGh 89 (521)
T 2ipi_A 19 FDGGACGART----ALVKVDRVDRRYQDLV-TRGFNGRFRG----RPDVVYVVHTADQVVDAVNQAMAAGQRIAVRSGGH 89 (521)
T ss_dssp --------------CCCEEESSSTTHHHHH-TCCSCTTCCC----CCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSCC
T ss_pred ccccccccCC----CCeEECCCCcchHHHH-hccccccccC----CCCEEEEcCCHHHHHHHHHHHHHcCCeEEEECCCc
Confidence 4556677663 4569999999999986 2467888854 89999999999999999999999999999999999
Q ss_pred CCCCCcccCCCCeEEEEcCCCcceEEcCCCCEEEEcCCCcHHHHHHHHH-HhCCCceeecCCCCCCceEeeeccCCCcCC
Q 048047 85 DLEGLSSISDVPFIIVDLINFSEISVNAEAKTAWVQSGATVGQLNYRIA-EKSQNLLAFPVGTCPGVAVGGHFSGGGYGA 163 (466)
Q Consensus 85 ~~~g~s~~~~~~~~~idl~~l~~v~~d~~~~~~~vg~G~~~~~v~~~l~-~~g~~~l~~~~G~~~~vg~gG~~lgGG~g~ 163 (466)
++.+.+.... ++++|||++||+|++|++.++|+||+|++|++|+++|. ++| +++++|.|++|||||+++|||+|+
T Consensus 90 ~~~g~~~~~~-~gvvIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G---l~~~~G~~~~vgvgG~~~gGg~g~ 165 (521)
T 2ipi_A 90 CFEGFVDDPA-VRAVIDMSQMRQVFYDSGKRAFAVEPGATLGETYRALYLDWG---VTIPAGVCPQVGVGGHVLGGGYGP 165 (521)
T ss_dssp CTTCGGGCTT-CCEEEECTTCCCEEEETTTTEEEECTTSBHHHHHHHHHHHHS---BCCCCCSCTTCBHHHHTTTTCCCT
T ss_pred CCCCCcccCC-CeEEEecccCCCeEEeCCCCEEEEeCCcCHHHHHHHHHHhcC---ceeCCCCCCCcccCCcccCCCCCc
Confidence 9988765332 48999999999999999999999999999999999997 687 578999999999999999999999
Q ss_pred ccchh-----------------------------------hHHHHHhhcCCCceEEEEEEEEEE-----------EecCc
Q 048047 164 LLRKY-----------------------------------DLFWAIRGGGGPSFGIIISWKIEL-----------VDVPS 197 (466)
Q Consensus 164 ~s~~~-----------------------------------dLfwalrG~g~~~fGvVt~~~~k~-----------~p~~~ 197 (466)
++++| |||||+||||+|||||||+++||+ +|.|+
T Consensus 166 ~s~~~G~~~D~v~~~evV~~d~~G~i~~~~~~~~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~~~~~~~~~~~~p~~~ 245 (521)
T 2ipi_A 166 LSRRDGVVADHLYAVEVVVVDASGRARKVVATSAADDPNRELWWAHTGGGGGNFGIVTRYWFRTPGATGTDPSQLLPKAP 245 (521)
T ss_dssp THHHHCCGGGGEEEEEEEEECTTSCEEEEEEECCTTCTTHHHHHHTTTSCSSSSCEEEEEEECCSSCCSSCGGGSSCBCC
T ss_pred cccccccHhhcEEEEEEEEecCCccEEEEecccccCCCCHHHHHHHhcCCCCceEEEEEEEEEeecccCCCcccccCCCC
Confidence 98887 399999998668999999999999 99875
Q ss_pred -eeEEEEEecchh----hhHHHHHHHHHHHHHh--hccc----ceeEEEEeecCCceEEEEEEEEeCCcccchhhhhhcC
Q 048047 198 -TVTVFAVPRTLE----QNATMLLHKWQYIADR--VHED----LFISPFLYRANSSMVCLFTSLFLGGVDRLLPLMQESF 266 (466)
Q Consensus 198 -~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~ 266 (466)
.++.+.+.|+.+ +.+.+++++|+++... .|++ +...+.+.... .-.+.+...|.|+.++..+.+++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~l~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~l~~~~ 324 (521)
T 2ipi_A 246 TSTLRHIVTWDWSALTEEAFTRIIDNHGAWHQSNSAAGTPYASMHSVFYLNSRA-AGQILLDIQIDGGLDGAEALLNDFV 324 (521)
T ss_dssp SCEEEEEEEEESTTCCHHHHHHHHHHHHHHHHHSCSSSSGGGGCEEEEEEECTT-SCEEEEEEEEETTSTTHHHHHHHHH
T ss_pred ceEEEEEEEecccccCHHHHHHHHHHHHHHHHhccCCCccccceEEEEEeccCC-CCceEEEEEeccCHHHHHHHHHHHH
Confidence 355555655432 2246788888887654 4544 33333332211 1134455678888877776676532
Q ss_pred C---c-CC-CCcCcceecCHHHHHHHhcCCCcc-cccccccccccCCCCHHHHHHHHHHHhccCCCceeEEEEEecCccc
Q 048047 267 P---E-LG-LTKEDCREMSFIESVVYINGFEIR-EFFKGKADYVMEPIPKEAFEGLYDLFYKEDPRTYGLLVFFPYGGKM 340 (466)
Q Consensus 267 ~---~-l~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~~~~GG~v 340 (466)
. . ++ +....+..++|.+........+.. .+++.++.++.+.++.+.++.+++.+...+ ...+.+.++++||++
T Consensus 325 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~GG~v 403 (521)
T 2ipi_A 325 AAVNEGTGVEPAVQRSTEPWLRATLANKFDTGGFDRTKSKGAYLRKPWTAAQAATLYRHLSADS-QVWGEVSLYSYGGKV 403 (521)
T ss_dssp HHHTTTCSSCCEEEEEEECHHHHHTCCCCCCTTCCEEEEEEEEESSCCCHHHHHHHHHHHHSCC-SSEEEEEEEECCGGG
T ss_pred HHHHhhcCCCccceeeecCHHHHHHhhcCCCCCCccceeeccccccCCCHHHHHHHHHHHHhCC-CCceEEEEEecCCcc
Confidence 1 1 22 233456678998875443322222 345556777766799999999999887642 245678899999999
Q ss_pred CCCCCCCCCCcccCCceEEEEEEEEeCCCChHhHHHHHHHHHHHHHcccccccC------CCCcccccccCCccCCCCCC
Q 048047 341 SETSESEIPFPHRAGNIYTLLYYADWQDATDEASQRHKNMLNKLFNYMTPYVAK------NPRTAYINYRDLDIGTNNKL 414 (466)
Q Consensus 341 ~~v~~~~tAf~~R~~~~~~v~~~~~W~~~~~~~~~~~~~w~~~~~~~l~~~~~~------~~~g~Y~Ny~d~~~~~~~~~ 414 (466)
.+++.++|+|+||+ +.+.+++...|.++. .++...+|++++++.+...... ...++|+||+|.+++. +.
T Consensus 404 ~~~~~~~ta~~~R~-~~~~~~~~~~w~~~~--~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~g~Y~Ny~d~~~~~--~~ 478 (521)
T 2ipi_A 404 NSVPETATATAQRD-SIIKVWMSATWMDPA--HDDANLAWIREIYREIFATTGGVPVPDDRTEGTFINYPDVDLVD--ER 478 (521)
T ss_dssp GGSCTTTSSCCCCS-CSEEEEEEEEESCGG--GHHHHHHHHHHHHHHHTTTTTSSCCSSSSBCCCCTTSCCGGGGC--TT
T ss_pred cCCCCccccccccc-hhhhcceeEecCCCC--chHHHHHHHHHHHHHHHhhhcCCCcccCCCCceEeCCCCccccc--cc
Confidence 99998999999999 589999999998763 4667899999999988733211 1357999999998752 10
Q ss_pred CCCchhchhhhhhhhccccHHHHHHhhhccCCCCCcccCCCCCCc
Q 048047 415 GDTSVQEAGVWGKKYFKNNFYRLVHVKTMVDPENFFRNEQSIPPF 459 (466)
Q Consensus 415 ~~~~~~~~~~~~~~yyg~n~~RL~~IK~kYDP~nvF~~~~~I~~~ 459 (466)
++.++ ..|++.|||+||+||++||+||||+|||+++|+|+|+
T Consensus 479 ~~~~~---~~~~~~y~g~n~~RL~~iK~kyDP~~vF~~~qsI~p~ 520 (521)
T 2ipi_A 479 WNTSG---VPWYTLYYKGNYPRLQKVKARWDPRDVFRHALSVRPP 520 (521)
T ss_dssp TSCCS---CCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred cccch---hhHHHhhhhhHHHHHHHHHHHhCCcCEecCCCCCCCC
Confidence 11111 2499999999999999999999999999999999985
No 8
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=100.00 E-value=1.2e-66 Score=548.76 Aligned_cols=421 Identities=25% Similarity=0.411 Sum_probs=324.7
Q ss_pred ceEEcCCCCCchHHhhhcccccccCCCCCCCCCEEEecCCHHHHHHHHHHHHhcCCcEEEeccccCCCCCcccCCCCeEE
Q 048047 20 KVIYTQNNSSYSSVLKSSIQNLVFSTPTNQKPPFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGLSSISDVPFII 99 (466)
Q Consensus 20 ~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dV~~~v~~a~~~~~~~~vr~gGh~~~g~s~~~~~~~~~ 99 (466)
..|++|+|++|++++. .||.||. ..|.+||+|+|++||+++|++|+++++||.||||||++.+.+.... ++++
T Consensus 34 ~~v~~p~~~~Y~~~~~--~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~-~gvv 106 (530)
T 2y3s_A 34 IDSVAPGDIRYEDLRR--GENLRFV----GDPEEIHLVGSAAEIEQVLSRAVRSGKRVAVRSGGHCYEDFVANSD-VRVV 106 (530)
T ss_dssp CCEECTTSTTHHHHTC--CSCTTCC----CCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTCTT-CCEE
T ss_pred ceEECCCCccHHHHHh--Hhhhhcc----CCCCEEEecCCHHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccCC-CeEE
Confidence 4689999999999864 5677774 4899999999999999999999999999999999999988665432 4899
Q ss_pred EEcCCCcceEEcCCCCEEEEcCCCcHHHHHHHHHH-hCCCceeecCCCCCCceEeeeccCCCcCCccchh----------
Q 048047 100 VDLINFSEISVNAEAKTAWVQSGATVGQLNYRIAE-KSQNLLAFPVGTCPGVAVGGHFSGGGYGALLRKY---------- 168 (466)
Q Consensus 100 idl~~l~~v~~d~~~~~~~vg~G~~~~~v~~~l~~-~g~~~l~~~~G~~~~vg~gG~~lgGG~g~~s~~~---------- 168 (466)
|||++||+|++|++.++|+||+|++|++|+++|.+ +| +++++|.|++||+||+++|||+|+++++|
T Consensus 107 Idl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G---l~~~~G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~ 183 (530)
T 2y3s_A 107 MDMSRLSAVGFDEERGAFAVEAGATLGAVYKTLFRVWG---VTLPGGACPDVGAGGHILGGGYGPLSRMHGSIVDYLHAV 183 (530)
T ss_dssp EECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHHS---CCCCCCSCTTCBHHHHHHTTCCCTTHHHHCCGGGGEEEE
T ss_pred EEcccCCCEEEcCCCCEEEEeCCCCHHHHHHHHHhhcC---eEEeCCCCCCCCcCCCcCCCCCCcccccccchhhheeeE
Confidence 99999999999999999999999999999999985 77 57999999999999999999999998777
Q ss_pred -------------------------hHHHHHhhcCCCceEEEEEEEEEE------------EecCc-eeEEEEEecchh-
Q 048047 169 -------------------------DLFWAIRGGGGPSFGIIISWKIEL------------VDVPS-TVTVFAVPRTLE- 209 (466)
Q Consensus 169 -------------------------dLfwalrG~g~~~fGvVt~~~~k~------------~p~~~-~~~~~~~~~~~~- 209 (466)
|||||+||||+|+|||||+++||+ +|.|+ .++.+.+.|+.+
T Consensus 184 evV~~d~~G~i~~v~~~~~~~~~d~DLf~a~rG~g~g~fGIVt~~~l~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 263 (530)
T 2y3s_A 184 EVVVVDASGDARTVIATREPSDPNHDLWWAHTGGGGGNFGVVVRYWLRTAEADVPPEPGRLLPRPPAEVLLNTTVWPWEG 263 (530)
T ss_dssp EEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCTTSSCEEEEEEECCCCSSCCSCGGGSSCCCCSEEEEEEEEEESTT
T ss_pred EEEEecCCCcEEEEeccccccCCChHHHHHHhcCCCCCcEEEEEEEEEeecccCccccccccCCCCceEEEEEEEecccc
Confidence 399999998768999999999999 99875 455555555432
Q ss_pred ---hhHHHHHHHHHHHHHh--hccc----ceeEEEEeecCCceEEEEEEEEeCCcccchhhhhhcCC---c-CC-CCcCc
Q 048047 210 ---QNATMLLHKWQYIADR--VHED----LFISPFLYRANSSMVCLFTSLFLGGVDRLLPLMQESFP---E-LG-LTKED 275 (466)
Q Consensus 210 ---~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~---~-l~-~~~~~ 275 (466)
..+.++++.|+++... .|++ +...+.+... ....+.+...|.|+.++..+.+++++. . ++ +....
T Consensus 264 ~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~l~p~~~~l~~~~g~~~~~~ 342 (530)
T 2y3s_A 264 LDEAAFARLVRNHGRWFEQNSGPDSPWCDLYSVLALTRS-QSGALAMTTQLDATGPDAEKRLETYLAAVSEGVGVQPHSD 342 (530)
T ss_dssp CCHHHHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEECG-GGSEEEEEEEEECCSTTHHHHHHHHHHHHHTTCSSCCEEE
T ss_pred cCHHHHHHHHHHHHHHhhhcCCCCcccceeEEEEEeccC-CCCcEEEEEEEeCCHHHHHHHHHHHHHHHHhhcCCCccce
Confidence 2346788888887654 3544 2222222221 112344556788888777777765321 1 23 23345
Q ss_pred ceecCHHHHHHHhcCCCcc---cccccccccccCCCCHHHHHHHHHHHhccC-CCceeEEEEEecCcccCCCCCCCCCCc
Q 048047 276 CREMSFIESVVYINGFEIR---EFFKGKADYVMEPIPKEAFEGLYDLFYKED-PRTYGLLVFFPYGGKMSETSESEIPFP 351 (466)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~---~~~~~~s~~~~~~l~~~~i~~i~~~~~~~~-~~~~~~~~~~~~GG~v~~v~~~~tAf~ 351 (466)
+..++|.+........+.. .+++.++.++.+.++++.++.+++.+.... +...+.+.++++||++.+++.++|+|+
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~GGav~~~~~~~ta~~ 422 (530)
T 2y3s_A 343 TRRLPWLHSTRWPGIAGDGDMTGRAKIKAAYARRSFDDRQIGTLYTRLTSTDYDNPAGVVALIAYGGKVNAVPADRTAVA 422 (530)
T ss_dssp EEEEEHHHHTTCHHHHCCCCCCSEEEEEEEEESSCCCHHHHHHHHHHHHCSSSCCTTCEEEEEECCGGGGGSCTTSSSCC
T ss_pred eeeccHHHHHHhhcCCCCCcccccceeeccccccCCCHHHHHHHHHHHHhcCCCCCceEEEEEecCCccccCCCCcCccc
Confidence 6678888754332211111 255667777776799999999999887642 222467889999999999999999999
Q ss_pred ccCCceEEEEEEEEeCCCChHhHHHHHHHHHHHHHcccccccC------CCCcccccccCCccCCCCCCCCCchhchhhh
Q 048047 352 HRAGNIYTLLYYADWQDATDEASQRHKNMLNKLFNYMTPYVAK------NPRTAYINYRDLDIGTNNKLGDTSVQEAGVW 425 (466)
Q Consensus 352 ~R~~~~~~v~~~~~W~~~~~~~~~~~~~w~~~~~~~l~~~~~~------~~~g~Y~Ny~d~~~~~~~~~~~~~~~~~~~~ 425 (466)
||+ ..|++++...|.++. .++...+|++++++.+.+.... ...|+|+||+|.+++. +.+++++ ..|
T Consensus 423 ~R~-~~~~~~~~~~w~~~~--~~~~~~~w~~~~~~~l~~~~~g~p~~~~~~~g~Y~Ny~d~~~~~--~~~~~s~---~~~ 494 (530)
T 2y3s_A 423 QRD-SILKIVYVTTWEDPA--QDPVHVRWIRELYRDVYADTGGVPVPGGAADGAYVNYPDVDLAD--EEWNTSG---VPW 494 (530)
T ss_dssp CCS-CSEEEEEEEEECCTT--CHHHHHHHHHHHHHHHTGGGTTSCCTTTTBCCCCTTSCCGGGGC--TTTCCSS---CCH
T ss_pred ccc-cceeEEEEEecCCCc--chHHHHHHHHHHHHHHHhhhcCCCcccCCCCceEeCCcCccccc--cccccch---hHH
Confidence 999 589999999998764 4567899999999988733211 1357999999998752 1011221 249
Q ss_pred hhhhccccHHHHHHhhhccCCCCCcccCCCCCCc
Q 048047 426 GKKYFKNNFYRLVHVKTMVDPENFFRNEQSIPPF 459 (466)
Q Consensus 426 ~~~yyg~n~~RL~~IK~kYDP~nvF~~~~~I~~~ 459 (466)
++.|||+||+||++||+||||+|||+++|+|+|+
T Consensus 495 ~~~yyg~n~~RL~~iK~kyDP~nvF~~~q~I~p~ 528 (530)
T 2y3s_A 495 SELYYKDAYPRLQAVKARWDPRNVFRHALSVRVP 528 (530)
T ss_dssp HHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHhCchhhcCCCCCCCCC
Confidence 9999999999999999999999999999999986
No 9
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=100.00 E-value=4e-65 Score=535.12 Aligned_cols=424 Identities=22% Similarity=0.403 Sum_probs=329.0
Q ss_pred chhhHHHHHhhcCCCCCceEEcCCCCCchHHhhhcccccccCCCCCCCCCEEEecCCHHHHHHHHHHHHhcCCcEEEecc
Q 048047 3 NHENFLKCLSLQSDTISKVIYTQNNSSYSSVLKSSIQNLVFSTPTNQKPPFIITPFHVSEIQAAIKCSKKSGLQIRVRSG 82 (466)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dV~~~v~~a~~~~~~~~vr~g 82 (466)
..+.|++||... ...++.|+++.|+.... +|+......|.+||+|+|++||+++|++|+++++||.||||
T Consensus 5 ~~~~l~~~l~~~----~~~~~~~~~~~y~~~~~------~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~gg 74 (503)
T 1zr6_A 5 EFNSINACLAAA----DVEFHEEDSEGWDMDGT------AFNLRVDYDPAAIAIPRSTEDIAAAVQCGLDAGVQISAKGG 74 (503)
T ss_dssp TTCHHHHHHHHT----TCEECCTTSHHHHHHTS------CSBGGGCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESS
T ss_pred HHHHHHHhhCcC----CceecCCCccchHHHhh------hhhhcccCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEECC
Confidence 346788888762 23588999999998632 35443445899999999999999999999999999999999
Q ss_pred ccCCCCCcccCCCCeEEEEcCCCcceEEcCCCCEEEEcCCCcHHHHHHHHHHhCCCceeecCCCCCCceEeeeccCCCcC
Q 048047 83 GHDLEGLSSISDVPFIIVDLINFSEISVNAEAKTAWVQSGATVGQLNYRIAEKSQNLLAFPVGTCPGVAVGGHFSGGGYG 162 (466)
Q Consensus 83 Gh~~~g~s~~~~~~~~~idl~~l~~v~~d~~~~~~~vg~G~~~~~v~~~l~~~g~~~l~~~~G~~~~vg~gG~~lgGG~g 162 (466)
||++.+.+....+++++|||++||+|++| +.++|+||+|++|++|+++|.+++. +++|+|.|++||+||+++|||+|
T Consensus 75 Gh~~~~~~~~~~~~gvvIdl~~l~~i~~d-~~~~v~v~aG~~~~~l~~~l~~~~g--l~~~~G~~~~vgvgG~~~gGg~g 151 (503)
T 1zr6_A 75 GHSYGSYGFGGEDGHLMLELDRMYRVSVD-DNNVATIQGGARLGYTALELLDQGN--RALSHGTCPAVGVGGHVLGGGYG 151 (503)
T ss_dssp CCCTTCTTTTSSSSCEEEECTTCCCEEEC-TTSCEEEETTCBHHHHHHHHHHTTS--EECCCCSCTTSBHHHHHHHCCCS
T ss_pred CcCCCCCcccCCCCcEEEECccCCCEEEC-CCCeEEEecCCCHHHHHHHHHHcCC--EEeCCCCCCcCchhhhhcCCCCC
Confidence 99998766542224899999999999999 8889999999999999999977762 78999999999999999999999
Q ss_pred Cccchh----------------------------hHHHHHhhcCCCceEEEEEEEEEEEecCceeEEEEEecchh-hhHH
Q 048047 163 ALLRKY----------------------------DLFWAIRGGGGPSFGIIISWKIELVDVPSTVTVFAVPRTLE-QNAT 213 (466)
Q Consensus 163 ~~s~~~----------------------------dLfwalrG~g~~~fGvVt~~~~k~~p~~~~~~~~~~~~~~~-~~~~ 213 (466)
+++++| |||||+|||| |+|||||+++||++|.|+....+.+.+.++ +.+.
T Consensus 152 ~~s~~~G~~~D~v~~~~vV~a~G~i~~~~~~~~~dL~~a~rG~~-g~~GIVt~~~l~l~p~~~~~~~~~~~~~~~~~~~~ 230 (503)
T 1zr6_A 152 FATHTHGLTLDWLIGATVVLADASIVHVSETENADLFWALRGGG-GGFAIVSEFEFNTFEAPEIITTYQVTTTWNRKQHV 230 (503)
T ss_dssp TTHHHHCCGGGGEEEEEEECTTSCEEEEBTTBSHHHHHHHTTCC-SSSCEEEEEEECCEECCSCEEEEEEEECCCHHHHH
T ss_pred cccccccChhheEEEEEEEecCCCEEEeCCCCCccHHHHHhccC-CCcEEEEEEEEEEEecCceeEEEEEEEeCCHHHHH
Confidence 999998 9999999999 699999999999999998655556555442 3467
Q ss_pred HHHHHHHHHHHh-hcccceeEEEEeecCCceEEEEEEEEeCCcccchhhhhhcCCcCCC--CcCcceecCHHHHHHHhcC
Q 048047 214 MLLHKWQYIADR-VHEDLFISPFLYRANSSMVCLFTSLFLGGVDRLLPLMQESFPELGL--TKEDCREMSFIESVVYING 290 (466)
Q Consensus 214 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~ 290 (466)
+++++|+++... +|++++..+.+.. ..+.+..+|+|+.+++.+.+++++..++. ....+..++|.+.......
T Consensus 231 ~~~~~~~~~~~~~~p~~~~~~~~~~~----~~~~~~~~~~g~~~~~~~~l~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (503)
T 1zr6_A 231 AGLKALQDWAQNTMPRELSMRLEINA----NALNWEGNFFGNAKDLKKILQPIMKKAGGKSTISKLVETDWYGQINTYLY 306 (503)
T ss_dssp HHHHHHHHHHHHTCCTTBCCEEEEET----TEEEEEEEESSCHHHHHHHHHHHHHHTTSCEEEEEEEEECHHHHHTTSCT
T ss_pred HHHHHHHHHHhhcCChhHEEEEEEeC----CeEEEEEEEECCHHHHHHHHHHHHHhcCcCCCcCceeeCCHHHHHHHHcC
Confidence 889999998876 8888888776653 24566778999988888888775333333 2334567888865432210
Q ss_pred -------CCc--ccccccccccccCCCCHHHHHHHHHHHh-ccCCC--ceeEEEEEecCc---ccCCCCCCCCCCcccCC
Q 048047 291 -------FEI--REFFKGKADYVMEPIPKEAFEGLYDLFY-KEDPR--TYGLLVFFPYGG---KMSETSESEIPFPHRAG 355 (466)
Q Consensus 291 -------~~~--~~~~~~~s~~~~~~l~~~~i~~i~~~~~-~~~~~--~~~~~~~~~~GG---~v~~v~~~~tAf~~R~~ 355 (466)
.|. +..++.++.++.+ ++++.++.+++.+. ..... ..+.+.++++|| ++.+++.++++|+||+
T Consensus 307 ~~~~~~~~p~g~~~~~~~~s~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~av~~~~~~~ta~~~R~- 384 (503)
T 1zr6_A 307 GADLNITYNYDVHEYFYANSLTAPR-LSDEAIQAFVDYKFDNSSVRPGRGWWIQWDFHGGKNSALAAVSNDETAYAHRD- 384 (503)
T ss_dssp TCCSSCSSCCCCCBCEEEEEEEESS-CCHHHHHHHHHHHHHSCCCCTTEEEEEEEEECCSTTCSGGGSCTTTSSCCCTT-
T ss_pred CCcccccCCCCccccceecccchhh-CCHHHHHHHHHHHHhhCCCCCCcceEEEEEEcCCchhhhcCCCcccCCccccc-
Confidence 121 1235566777666 89999999999887 54321 234678899999 8888888999999999
Q ss_pred ceEEEEEEEEe-----CCCChHhHHHHHHHHHHHHHcccccccCCCCcccccccCCccCCCCCCCCCchhchhhhhhhhc
Q 048047 356 NIYTLLYYADW-----QDATDEASQRHKNMLNKLFNYMTPYVAKNPRTAYINYRDLDIGTNNKLGDTSVQEAGVWGKKYF 430 (466)
Q Consensus 356 ~~~~v~~~~~W-----~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~g~Y~Ny~d~~~~~~~~~~~~~~~~~~~~~~~yy 430 (466)
+.|++++...| .++. .++...+|++++++.+.........|+|+||+|.+++ ...|++.||
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~g~Y~Nyad~~~~------------~~~~~~~~y 450 (503)
T 1zr6_A 385 QLWLWQFYDSIYDYENNTSP--YPESGFEFMQGFVATIEDTLPEDRKGKYFNYADTTLT------------KEEAQKLYW 450 (503)
T ss_dssp CSEEEEEEEEETTTTTCCTT--TTTSCHHHHHHHHHHHHTTSCGGGCBCCGGGCCTTCC------------HHHHHHHHH
T ss_pred ceeEEEEEeeeccccCCCcc--chHHHHHHHHHHHHHHHhhCCCCCCceeccCCCcccc------------cchHHHHHH
Confidence 57888886776 3322 2234456777666655543221124799999998764 136999999
Q ss_pred cccHHHHHHhhhccCCCCCcccCCCCCCcC
Q 048047 431 KNNFYRLVHVKTMVDPENFFRNEQSIPPFN 460 (466)
Q Consensus 431 g~n~~RL~~IK~kYDP~nvF~~~~~I~~~~ 460 (466)
|+||+||++||+||||+|||+++|+|+|..
T Consensus 451 G~n~~RL~~iK~kyDP~~vF~~~~~i~~~~ 480 (503)
T 1zr6_A 451 RGNLEKLQAIKAKYDPEDVFGNVVSVEPIA 480 (503)
T ss_dssp GGGHHHHHHHHHHHCTTCTTCCTTSCCCCC
T ss_pred HhHHHHHHHHHHHhCchhhcCCCCCCCchh
Confidence 999999999999999999999999999853
No 10
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=100.00 E-value=1.8e-62 Score=510.65 Aligned_cols=406 Identities=23% Similarity=0.326 Sum_probs=313.2
Q ss_pred CCceEEcCCCCCchHHhhhcccccccCCCCCCCCCEEEecCCHHHHHHHHHHHHhcCCcEEEeccccCCCCCcccCCCCe
Q 048047 18 ISKVIYTQNNSSYSSVLKSSIQNLVFSTPTNQKPPFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGLSSISDVPF 97 (466)
Q Consensus 18 ~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dV~~~v~~a~~~~~~~~vr~gGh~~~g~s~~~~~~~ 97 (466)
+++.|++|+|+.|+.... +|+......|.+||+|+|++||+++|++|+++++||.||||||++.+.+... ++
T Consensus 12 ~~~~v~~p~~~~y~~~~~------~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~~~~~~~--~g 83 (459)
T 2bvf_A 12 IQGEVIYPDDSGFDAIAN------IWDGRHLQRPSLIARCLSAGDVAKSVRYACDNGLEISVRSGGHNPNGYATND--GG 83 (459)
T ss_dssp CSSEEECTTSTTHHHHHC------CSCTTCCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTCTTCCS--SS
T ss_pred CCceEECCCCccHHHHHH------HhhhhccCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEEcCCcCCCCccccC--Ce
Confidence 478999999999998643 3555555689999999999999999999999999999999999998876544 48
Q ss_pred EEEEcCCCcceEEcCCCCEEEEcCCCcHHHHHHHHHHhCCCceeecCCCCCCceEeeeccCCCcCCccchh---------
Q 048047 98 IIVDLINFSEISVNAEAKTAWVQSGATVGQLNYRIAEKSQNLLAFPVGTCPGVAVGGHFSGGGYGALLRKY--------- 168 (466)
Q Consensus 98 ~~idl~~l~~v~~d~~~~~~~vg~G~~~~~v~~~l~~~g~~~l~~~~G~~~~vg~gG~~lgGG~g~~s~~~--------- 168 (466)
++|||++||+|++|++..+|+||+|++|++|+++|.++| +++++|.|++||+||+++|||+|+++++|
T Consensus 84 vvi~l~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~G---l~~~~g~~~~~gi~G~~~gGg~g~~~~~~G~~~d~v~~ 160 (459)
T 2bvf_A 84 IVLDLRLMNSIHIDTAGSRARIGGGVISGDLVKEAAKFG---LAAVTGMHPKVGFCGLALNGGVGFLTPKYGLASDNILG 160 (459)
T ss_dssp EEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHTTT---EEECCCSCTTSBHHHHHTTCCCCTTHHHHCCGGGGEEE
T ss_pred EEEECCCCCCEEECCCCCEEEECCCCCHHHHHHHHHHcC---CEecCCCCCCcccceeecCCCCccccccccCHhHhEEE
Confidence 999999999999999999999999999999999999987 68999999999999999999999999988
Q ss_pred -------------------hHHHHHhhcCCCceEEEEEEEEEEEecCceeEEEEEecchhhhHH--HHHHHHHHHHHhhc
Q 048047 169 -------------------DLFWAIRGGGGPSFGIIISWKIELVDVPSTVTVFAVPRTLEQNAT--MLLHKWQYIADRVH 227 (466)
Q Consensus 169 -------------------dLfwalrG~g~~~fGvVt~~~~k~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 227 (466)
|||||+|||+ |+|||||+++||++|.|..+....+.|+.. .+. ++++.|+++....|
T Consensus 161 ~~vV~~~G~i~~~~~~~~~dLf~a~rg~~-g~~GiVt~~~l~l~p~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 238 (459)
T 2bvf_A 161 ATLVTATGDVIYCSDDERPELFWAVRGAG-PNFGVVTEVEVQLYELPRKMLAGFITWAPS-VSELAGLLTSLLDALNEMA 238 (459)
T ss_dssp EEEECTTSCEEEEESSSSHHHHHHHHHHG-GGTCEEEEEEEEEEECCCCEEEEEEEECCC-HHHHHHHHHHHHHHHHHTT
T ss_pred EEEEcCCCeEEEeCCCCChhhHhHhhccC-CccEEEEEEEEEEEECCCcEEEEEEEechH-HhhHHHHHHHHHHHHHhCc
Confidence 9999999999 899999999999999976555555556542 234 78888988887777
Q ss_pred ccceeEEEEee-cCCceEEEEEEEEeCCcccchhhhhhcCCcCC-CCcCcceecCHHHHHHHhc---CCCccccccc--c
Q 048047 228 EDLFISPFLYR-ANSSMVCLFTSLFLGGVDRLLPLMQESFPELG-LTKEDCREMSFIESVVYIN---GFEIREFFKG--K 300 (466)
Q Consensus 228 ~~~~~~~~~~~-~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--~ 300 (466)
+.+...+.... ..+...+.+...|.|+.++..+.++++ .++. .....+..++|.+...... .++.....+. +
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (459)
T 2bvf_A 239 DHIYPSVFVGVDENRAPSVTVCVGHLGGLDIAERDIARL-RGLGRTVSDSIAVRSYDEVVALNAEVGSFEDGMSNLWIDR 317 (459)
T ss_dssp TTCCCEEEEEECTTCCEEEEEEEECCSCHHHHHHHHHHH-HTTSCCSEECCEEECHHHHHHHHHHHSCCCCSCEEEEEEE
T ss_pred HhhccccccCcccCCCceEEEEEEEeCCHHHHHHHHHHH-HHhCcchhcceeecCHHHHHhcccccccCCCCCcceEecc
Confidence 77643332211 123445666678889887777777664 3343 3334567788877543321 2233222222 5
Q ss_pred cccccCCCCHHHHHHHHHHHhccCCCc-eeEEEEEecCcccCCCCCCCCCCcccCCceEEEEEEEEeCCCChHhHHHHHH
Q 048047 301 ADYVMEPIPKEAFEGLYDLFYKEDPRT-YGLLVFFPYGGKMSETSESEIPFPHRAGNIYTLLYYADWQDATDEASQRHKN 379 (466)
Q Consensus 301 s~~~~~~l~~~~i~~i~~~~~~~~~~~-~~~~~~~~~GG~v~~v~~~~tAf~~R~~~~~~v~~~~~W~~~~~~~~~~~~~ 379 (466)
+.++.+.++.+.++.+++.+.+.+... .+.++ .+||++.+ .+.+||+||+. .+ +.+...|.++.. .++...+
T Consensus 318 s~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~gg~~~~--~~~ta~~~R~~-~~-~~~~~~w~~~~~-~~~~~~~ 390 (459)
T 2bvf_A 318 EIAMPNARFAEAIAGNLDKFVSEPASGGSVKLE--IEGMPFGN--PKRTPARHRDA-MG-VLALAEWSGAAP-GSEKYPE 390 (459)
T ss_dssp EECSCHHHHHHHHHTTGGGCEEETTTTEEEEEE--EECCCCCC--TTCCSSCCCSS-CE-EEEEEEECTTST-TTTHHHH
T ss_pred ccccCCCCCHHHHHHHHHHHhhCCCCCceeEEE--EeCCccCC--CCCCCcccCCc-ce-EEEEEEeCCCcc-chHHHHH
Confidence 556553456667777766665433122 23333 33887766 56799999995 67 888999987641 3446789
Q ss_pred HHHHHHHcccccccCCCCcccccccCCccCCCCCCCCCchhchhhhhhhhcccc-HHHHHHhhhccCCCCCcccCCCCCC
Q 048047 380 MLNKLFNYMTPYVAKNPRTAYINYRDLDIGTNNKLGDTSVQEAGVWGKKYFKNN-FYRLVHVKTMVDPENFFRNEQSIPP 458 (466)
Q Consensus 380 w~~~~~~~l~~~~~~~~~g~Y~Ny~d~~~~~~~~~~~~~~~~~~~~~~~yyg~n-~~RL~~IK~kYDP~nvF~~~~~I~~ 458 (466)
|++++.+.+.++......|+|+||+|.+. ..|...|||+| |+||++||+||||+|+|+++|+|+|
T Consensus 391 ~~~~~~~~l~~~~~~p~~g~Y~N~~d~~~--------------~~~~~~~yG~~n~~rL~~iK~kyDP~~vF~~~~~I~p 456 (459)
T 2bvf_A 391 LARELDAALLRAGVTTSGFGLLNNNSEVT--------------AEMVAEVYKPEVYSRLAAVKREYDPENRFRHNYNIDP 456 (459)
T ss_dssp HHHHHHHHHHHTTCEEEEECCGGGCSSCC--------------HHHHHHHHCHHHHHHHHHHHHHHCTTCCCCSSSCCCC
T ss_pred HHHHHHHHhcccccCCCCCeeeCCCCCcc--------------hHHHHHHhCcchHHHHHHHHHHhCcccccCCCCCCCC
Confidence 99999999998842113479999999863 26899999986 9999999999999999999999998
No 11
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=100.00 E-value=7.8e-36 Score=315.58 Aligned_cols=189 Identities=18% Similarity=0.239 Sum_probs=146.6
Q ss_pred hhhHHHHHhhcCCCCCceEEcCCCCCchHHhhhcccccccCCCCCCCCCEEEecCCHHHHHHHHHHHHh--c-CCcEEEe
Q 048047 4 HENFLKCLSLQSDTISKVIYTQNNSSYSSVLKSSIQNLVFSTPTNQKPPFIITPFHVSEIQAAIKCSKK--S-GLQIRVR 80 (466)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dV~~~v~~a~~--~-~~~~~vr 80 (466)
.++|.+||.++. +.+.|.+ ++..+... ...|+......|.+||+|+|++||+++|++|++ + ++|+++|
T Consensus 31 ~~~~~~~l~~~~--~~~~v~~-~~~~~~~~------~~d~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~~~v~~~ 101 (534)
T 1w1o_A 31 GRPWPASLAALA--LDGKLRT-DSNATAAA------STDFGNITSALPAAVLYPSSTGDLVALLSAANSTPGWPYTIAFR 101 (534)
T ss_dssp ---------CTT--TTTCEEC-SHHHHHHT------SCCTTCSCCCCCSEEECCSSHHHHHHHHHHHHHCTTCCCCEEEE
T ss_pred hHHHHHHHHhcC--CCceEec-CHHHHHHH------hccccccccCCCCEEEecCCHHHHHHHHHHHHhcCCCCceEEEE
Confidence 346777777743 3556665 22233322 224655455689999999999999999999998 6 9999999
Q ss_pred ccccCCCCCcccCCCCeEEEEcCCCcce------EEcCCCCEEEEcCCCcHHHHHHHHHHhCCCceeecCC-CCCCceEe
Q 048047 81 SGGHDLEGLSSISDVPFIIVDLINFSEI------SVNAEAKTAWVQSGATVGQLNYRIAEKSQNLLAFPVG-TCPGVAVG 153 (466)
Q Consensus 81 ~gGh~~~g~s~~~~~~~~~idl~~l~~v------~~d~~~~~~~vg~G~~~~~v~~~l~~~g~~~l~~~~G-~~~~vg~g 153 (466)
|||||+.|.+...+ +++|||++||+| ++|+++.+++||+|++|.+|++++.++| +..+.+ .++++++|
T Consensus 102 G~G~~~~g~~~~~~--gvvi~l~~m~~i~~~~~~~~d~~~~~v~v~aGv~~~~l~~~~~~~G---l~~~~~~~~~~~tvG 176 (534)
T 1w1o_A 102 GRGHSLMGQAFAPG--GVVVNMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARG---VAPRSWTDYLYLTVG 176 (534)
T ss_dssp SSCCCSSSTTCCTT--SEEEEGGGGGCSSSSCSEEECTTSSEEEEETTCBHHHHHHHHHTTT---EEESCCCSSCCSBHH
T ss_pred CCCCCCCCCcCCCC--eEEEECccccccccCccEEEcCCCCEEEECCCcCHHHHHHHHHHCC---CcccCCCCCCCEEec
Confidence 99999988877654 899999999984 8998889999999999999999999988 445543 44678899
Q ss_pred eeccCCCcCCccchh----------------------------hHHHHHhhcCCCceEEEEEEEEEEEecCceeEEEEEe
Q 048047 154 GHFSGGGYGALLRKY----------------------------DLFWAIRGGGGPSFGIIISWKIELVDVPSTVTVFAVP 205 (466)
Q Consensus 154 G~~lgGG~g~~s~~~----------------------------dLfwalrG~g~~~fGvVt~~~~k~~p~~~~~~~~~~~ 205 (466)
|.+.+||.|..+++| ||||++|||+ |+|||||+++||++|.|+......+.
T Consensus 177 G~v~~~g~g~~~~~yG~~~d~v~~~evV~~dG~v~~~~~~~~~dL~~~~rGs~-G~~GIVt~~~l~l~p~~~~~~~~~~~ 255 (534)
T 1w1o_A 177 GTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTCSKQLNADLFDAVLGGL-GQFGVITRARIAVEPAPARARWVRFV 255 (534)
T ss_dssp HHHTTCCCSTTHHHHCCGGGSEEEEEEEETTSCEEEEESSSSHHHHHHHTTCT-TCSEEEEEEEEEEEECCSEEEEEEEE
T ss_pred eeccCCCccccccccccHhhhEEEEEEEeCCccEEEECCCCChhhHhhhcCCC-CCcEEEEEEEEEEEECCcceEEEEEE
Confidence 999999999888888 9999999999 79999999999999999865444444
Q ss_pred cc
Q 048047 206 RT 207 (466)
Q Consensus 206 ~~ 207 (466)
+.
T Consensus 256 ~~ 257 (534)
T 1w1o_A 256 YT 257 (534)
T ss_dssp ES
T ss_pred eC
Confidence 43
No 12
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=99.97 E-value=3.7e-28 Score=255.68 Aligned_cols=160 Identities=26% Similarity=0.369 Sum_probs=133.4
Q ss_pred ccCCCCCCCCCEEEecCCHHHHHHHHHHHHh-cCCcEEEeccccCCCCCcccCCCCeEEEEcCCCcceEEcC-----CC-
Q 048047 42 VFSTPTNQKPPFIITPFHVSEIQAAIKCSKK-SGLQIRVRSGGHDLEGLSSISDVPFIIVDLINFSEISVNA-----EA- 114 (466)
Q Consensus 42 r~~~~~~~~p~~vv~p~~~~dV~~~v~~a~~-~~~~~~vr~gGh~~~g~s~~~~~~~~~idl~~l~~v~~d~-----~~- 114 (466)
.|+......|.+||+|+|++||+++|++|++ +++||++||||||+.|.+...+ +++|||++||+|++|+ +.
T Consensus 53 d~~~~~~~~P~~vv~P~s~eeV~~iv~~a~~~~~~~v~~~GgGts~~g~~~~~~--gvvidl~~m~~i~i~~~~~~~~~~ 130 (524)
T 2exr_A 53 DFGGMNCVKPLAVVRPVGPEDIAGAVKAALRSDKLTVAARGNGHSINGQAMAEG--GLVVDMSTTAENHFEVGYLSGGDA 130 (524)
T ss_dssp CTTCCCCCCCSEEEECSSHHHHHHHHHHHHHSSSCCEEEESSSCCSSSTTCCTT--SEEEEGGGGTTSCEEEEECCSSSS
T ss_pred cccccccCCCCEEEecCCHHHHHHHHHHHHhhcCceEEEECCCcCCCCcccCCC--EEEEECcCCCCcEEeecccCCCCC
Confidence 3554445689999999999999999999996 9999999999999988776544 8999999999987776 55
Q ss_pred -CEEEEcCCCcHHHHHHH-HHHhCCCceeecC-CCCCCceEeeeccCCCcCCccchh-----------------------
Q 048047 115 -KTAWVQSGATVGQLNYR-IAEKSQNLLAFPV-GTCPGVAVGGHFSGGGYGALLRKY----------------------- 168 (466)
Q Consensus 115 -~~~~vg~G~~~~~v~~~-l~~~g~~~l~~~~-G~~~~vg~gG~~lgGG~g~~s~~~----------------------- 168 (466)
.+++||||++|.+++++ |+++|. ..+. +.++.++|||.+.++|.|..+.+|
T Consensus 131 ~~~v~v~aGv~~~~l~~~~l~~~Gl---~~~~~~s~~~~tiGG~va~ng~G~~~~~yG~~~d~V~~l~vV~~dG~v~~~~ 207 (524)
T 2exr_A 131 TAFVDVSGGALWEDVLKRCVSEYGL---APRSWTDYLGLTVGGTLSNAGVSGQAFRYGPQTSNVTELDVVTGNGDVVTCS 207 (524)
T ss_dssp SEEEEEETTCBHHHHHHHHHHHHSE---ECSCCCSCCSSBHHHHHTTCCCCTTHHHHCCGGGSEEEEEEEETTSCEEEEE
T ss_pred ceEEEEeCCcCHHHHHHHHHHHcCC---CCCCCCcCCceeecccCCCCCCcccccccCcHhhhEEEEEEEecCCeEEEEC
Confidence 79999999999998655 558884 4333 345668899999999988877777
Q ss_pred -----hHHHHHhhcCCCceEEEEEEEEEEEecCceeEEEEEecc
Q 048047 169 -----DLFWAIRGGGGPSFGIIISWKIELVDVPSTVTVFAVPRT 207 (466)
Q Consensus 169 -----dLfwalrG~g~~~fGvVt~~~~k~~p~~~~~~~~~~~~~ 207 (466)
||||++||++ |+|||||++|||++|.|+......+.|.
T Consensus 208 ~~~~~dL~~~~~Gs~-GtlGiIt~~tl~l~p~p~~~~~~~~~f~ 250 (524)
T 2exr_A 208 EIENSELFFSVLGGL-GQFGIITRARVLLQPAPDMVRWIRVVYT 250 (524)
T ss_dssp SSSSHHHHHHHTTCT-TSSEEEEEEEEEEEECCSEEEEEEEEES
T ss_pred CCCChhHHhHhhcCC-CccEEEEEEEEEEEEcCCeeEEEEEEeC
Confidence 9999999999 8999999999999999986544445453
No 13
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=99.96 E-value=7.7e-27 Score=242.54 Aligned_cols=170 Identities=19% Similarity=0.212 Sum_probs=138.3
Q ss_pred ccCCCCCCCCCEEEecCCHHHHHHHHHHHHhc--CCcEEEeccccCCCCCcccCCCCeEEEEcCCCcce-EEcCCCCEEE
Q 048047 42 VFSTPTNQKPPFIITPFHVSEIQAAIKCSKKS--GLQIRVRSGGHDLEGLSSISDVPFIIVDLINFSEI-SVNAEAKTAW 118 (466)
Q Consensus 42 r~~~~~~~~p~~vv~p~~~~dV~~~v~~a~~~--~~~~~vr~gGh~~~g~s~~~~~~~~~idl~~l~~v-~~d~~~~~~~ 118 (466)
.|.. ....|.+||+|+|++||+++|++|+++ ++++.++|+|||+.+.+... ++++|||++||+| ++|++.++|+
T Consensus 35 ~W~~-~~~~p~~vv~P~s~eev~~~v~~a~~~~~~~~v~~~G~G~s~~~~~~~~--~gvvIdl~~l~~i~~~d~~~~~v~ 111 (481)
T 4feh_A 35 GWGR-TAPSVANVLRTPDAEMIVKAVARVAESGGGRGAIARGLGRSYGDNAQNG--GGLVIDMTPLNTIHSIDADTKLVD 111 (481)
T ss_dssp CTTC-CSCEEEEEEECSCHHHHHHHHHHHHTTTCTTCEEEECSSCSSSSTTCCT--TSEEEECTTCCCEEEEETTTTEEE
T ss_pred cccC-CCCCCCEEEeCCCHHHHHHHHHHHHHcCCCceEEEEeCCcCCCCCCCCc--CeEEEECccCCCceEEcCCCCEEE
Confidence 4643 356899999999999999999999999 79999999999997765543 3899999999998 9999999999
Q ss_pred EcCCCcHHHHHHHHHHhCCCceeecC-CCCCCceEeeeccCCCcCCccchh-----------------------------
Q 048047 119 VQSGATVGQLNYRIAEKSQNLLAFPV-GTCPGVAVGGHFSGGGYGALLRKY----------------------------- 168 (466)
Q Consensus 119 vg~G~~~~~v~~~l~~~g~~~l~~~~-G~~~~vg~gG~~lgGG~g~~s~~~----------------------------- 168 (466)
||+|+++.+|+++|.++|. +++. +..+.+++||.+.+|++|..++.|
T Consensus 112 v~aGv~l~~L~~~l~~~Gl---~l~~~~g~~~~tvGGaia~~a~G~~~~~~G~~~d~V~~~evV~~dG~v~~~s~~~~~~ 188 (481)
T 4feh_A 112 IDAGVNLDQLMKAALPFGL---WVPVLPGTRQVTVGGAIACDIHGKNHHSAGSFGNHVRSMDLLTADGEIRHLTPTGEDA 188 (481)
T ss_dssp EETTCBHHHHHHHHGGGTE---ECSCCCSCSCCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEECTTSCEEEECSSSTTH
T ss_pred EcCCccHHHHHHHHHHcCC---EEEEeCCcCccccCCccccccCCCCcccCCCccceEeEEEEEeCCCCEEEeCCCCCCh
Confidence 9999999999999999984 4542 333567899999999888876666
Q ss_pred hHHHHHhhcCCCceEEEEEEEEEEEecCceeEEEEEecchhhhHHHHHHHHH
Q 048047 169 DLFWAIRGGGGPSFGIIISWKIELVDVPSTVTVFAVPRTLEQNATMLLHKWQ 220 (466)
Q Consensus 169 dLfwalrG~g~~~fGvVt~~~~k~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (466)
|||||+|||+ |+|||||+++||++|.|+..... ..+.. .+..++++.+.
T Consensus 189 dLf~a~rgs~-G~~GIIt~~tl~l~p~~~~~~~~-~~~~~-~~l~~~~~~~~ 237 (481)
T 4feh_A 189 ELFWATVGGN-GLTGIIMRATIEMTPTSTAYFIA-DGDVT-ASLDETIALHS 237 (481)
T ss_dssp HHHHHHTTCT-TTTCEEEEEEEECEECSCSEEEE-EEEEC-SSHHHHHHHHS
T ss_pred HHHHHhhccC-CCceEEEEEEEEEEeCCccEEEE-EEEeC-CCHHHHHHHHH
Confidence 8999999998 79999999999999998643222 12222 23455665554
No 14
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=99.95 E-value=8.6e-28 Score=249.58 Aligned_cols=174 Identities=22% Similarity=0.306 Sum_probs=143.0
Q ss_pred ccCCCCCCCCCEEEecCCHHHHHHHHHHHHhcCCcEEEeccccCCCCCcccCCCCeEEEEcCCCcce-EEcCCCCEEEEc
Q 048047 42 VFSTPTNQKPPFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGLSSISDVPFIIVDLINFSEI-SVNAEAKTAWVQ 120 (466)
Q Consensus 42 r~~~~~~~~p~~vv~p~~~~dV~~~v~~a~~~~~~~~vr~gGh~~~g~s~~~~~~~~~idl~~l~~v-~~d~~~~~~~vg 120 (466)
.|+......|.+||+|+|++||+++|++|+++++|+++|||||++.|.+.... ++++|||++||+| ++|++..+++||
T Consensus 43 d~~~~~~~~p~~vv~P~s~eeV~~~v~~a~~~~~pv~~~GgGt~~~g~~~~~~-ggvvIdl~~m~~i~~id~~~~~v~V~ 121 (476)
T 3pm9_A 43 EERNLYRGHSPLVLRPGSTEEVVAICKLANEARVALVPQGGNTGLVGGQTPHN-GEVVISLKRMDKIREIDTSSNTITVE 121 (476)
T ss_dssp CTTCCCBCCCSCEECCCSHHHHHHHHHHHHHHTCCEEEESSSCCSSSTTCCCS-SCEEEECTTCCCEEEEETTTTEEEEE
T ss_pred ccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCccCCC-CcEEEEeeCCCceEEEcCCCCeEEEC
Confidence 46554456899999999999999999999999999999999999988776643 5899999999998 799999999999
Q ss_pred CCCcHHHHHHHHHHhCCCceeec--CCCCCCceEeeeccCCCcCCccchh------------------------------
Q 048047 121 SGATVGQLNYRIAEKSQNLLAFP--VGTCPGVAVGGHFSGGGYGALLRKY------------------------------ 168 (466)
Q Consensus 121 ~G~~~~~v~~~l~~~g~~~l~~~--~G~~~~vg~gG~~lgGG~g~~s~~~------------------------------ 168 (466)
||++|.+|+++|.++|. .++ .+++..+++||.+..++.|..+.+|
T Consensus 122 aGv~~~~l~~~l~~~Gl---~~~~~~~s~~~~tvGG~ia~nagG~~~~~yG~~~d~V~~levV~~dG~v~~~~~~~~k~~ 198 (476)
T 3pm9_A 122 AGAILQRVQEKAAEVDR---LFPLSLGAQGSCTIGGNLSTNAGGTAALAYGLARDMALGVEVVLADGRVMNLLSKLKKDN 198 (476)
T ss_dssp TTCBHHHHHHHHHHTTE---ECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEECTTSCEEECCCCCSCCC
T ss_pred CCcCHHHHHHHHHHhCC---ccCCCCCCCCcEEEccccCCCCCCCcccccCcHHHheeEEEEEccCCeEEEcCCcccCCC
Confidence 99999999999999984 444 4667788899998776666665555
Q ss_pred ---hHHHHHhhcCCCceEEEEEEEEEEEecCceeEEEEEecchhhhHHHHHHHHH
Q 048047 169 ---DLFWAIRGGGGPSFGIIISWKIELVDVPSTVTVFAVPRTLEQNATMLLHKWQ 220 (466)
Q Consensus 169 ---dLfwalrG~g~~~fGvVt~~~~k~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (466)
||+|+++|++ |+|||||+++||++|.|+......+.++...++.+++..+.
T Consensus 199 ~g~dl~~l~~Gs~-GtlGIIt~~tl~l~p~p~~~~~~~~~~~~~~~a~~~~~~~~ 252 (476)
T 3pm9_A 199 TGYDLRDLFIGAE-GTLGIITAATLKLFPKPRAVETAFVGLQSPDDALKLLGIAQ 252 (476)
T ss_dssp SSCCCHHHHTTST-TSSCEEEEEEEECEECCSEEEEEEEEESCHHHHHHHHHHHH
T ss_pred CCcCHHHHhccCC-CCcEEEEEEEEEEeecCceeEEEEEEcCCHHHHHHHHHHHH
Confidence 9999999999 89999999999999999865444454542233344444443
No 15
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=99.95 E-value=1.9e-27 Score=256.71 Aligned_cols=163 Identities=20% Similarity=0.191 Sum_probs=140.5
Q ss_pred cCCCCCCCCCEEEecCCHHHHHHHHHHHHhcCCcEEEeccccCCCCCcccCC---CCeEEEEcCCCcce-EEcCCCCEEE
Q 048047 43 FSTPTNQKPPFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGLSSISD---VPFIIVDLINFSEI-SVNAEAKTAW 118 (466)
Q Consensus 43 ~~~~~~~~p~~vv~p~~~~dV~~~v~~a~~~~~~~~vr~gGh~~~g~s~~~~---~~~~~idl~~l~~v-~~d~~~~~~~ 118 (466)
|+......|.+||+|+|++||+++|++|+++++||++|||||+..|.+.... .++|+|||++||+| +||+++.+++
T Consensus 198 ~~g~~~~~P~aVV~P~s~eeV~~iv~~A~~~~ipVvprGgGTsl~GG~~~~~~~~~ggVvLDlsrMnrIleiD~~~~~at 277 (658)
T 4bby_A 198 REGMFERIPDIVLWPTCHDDVVKIVNLACKYNLCIIPIGGGTSVSYGLMCPADETRTIISLDTSQMNRILWVDENNLTAH 277 (658)
T ss_dssp HSSCCSCCCSEEEECCSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTCCCTTCCSCEEEEECTTCCCEEEEETTTTEEE
T ss_pred hCCcccCCcCEEEeeCCHHHHHHHHHHHHHCCCeEEEECCCcCCCCCCCCCCCCCCcEEEEECccCCCcEEEcCCCCEEE
Confidence 4444456899999999999999999999999999999999999876554321 25799999999996 8999999999
Q ss_pred EcCCCcHHHHHHHHHHhCCCceeecCCCCCCceEeeeccCCCcCCccchh------------------------------
Q 048047 119 VQSGATVGQLNYRIAEKSQNLLAFPVGTCPGVAVGGHFSGGGYGALLRKY------------------------------ 168 (466)
Q Consensus 119 vg~G~~~~~v~~~l~~~g~~~l~~~~G~~~~vg~gG~~lgGG~g~~s~~~------------------------------ 168 (466)
||||+++.+|.++|+++|+. +.+..++.....|||++.+++.|..+.+|
T Consensus 278 VeaGv~~~~L~~~L~~~Gl~-lp~dP~S~~~aTIGG~iAtna~G~~s~rYG~~~d~VlgleVVlpdG~i~~~~~~~k~~a 356 (658)
T 4bby_A 278 VEAGITGQELERQLKESGYC-TGHEPDSLEFSTVGGWISTRASGMKKNIYGNIEDLVVHMKVVTPRGVIEKSCQGPRMST 356 (658)
T ss_dssp EETTCBHHHHHHHHHHHTEE-CCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEEECSCCCSSCCS
T ss_pred EecCchHHHHHHHHHHcCCc-cCCCCCCccccEEeehhhcCCCCCCccCcCCHHHheeeEEEEeCCCcccccccccccCC
Confidence 99999999999999999954 33345677778899999999999998888
Q ss_pred --hHHHHHhhcCCCceEEEEEEEEEEEecCceeEEEEEecc
Q 048047 169 --DLFWAIRGGGGPSFGIIISWKIELVDVPSTVTVFAVPRT 207 (466)
Q Consensus 169 --dLfwalrG~g~~~fGvVt~~~~k~~p~~~~~~~~~~~~~ 207 (466)
||+|+++|+. |+|||||++|||++|.|+......+.|+
T Consensus 357 GyDL~~L~iGSE-GTLGIITeatLrL~P~P~~~~~~~~~f~ 396 (658)
T 4bby_A 357 GPDIHHFIMGSE-GTLGVITEATIKIRPTPEYQKYGSVAFP 396 (658)
T ss_dssp SSCTHHHHTTCT-TSSCEEEEEEEECEECCSEEEEEEEEES
T ss_pred CcCHHHHhccCC-CcCcceeeeeeeeccCCccccccccccC
Confidence 9999999999 8999999999999999986555555554
No 16
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=99.94 E-value=7.6e-26 Score=232.56 Aligned_cols=148 Identities=17% Similarity=0.291 Sum_probs=128.8
Q ss_pred ccCCCCCCCCCEEEecCCHHHHHHHHHHHHhcCCcEEEeccccCCCCCcccCCCCeEEEEcCCCcce-EEcCCCCEEEEc
Q 048047 42 VFSTPTNQKPPFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGLSSISDVPFIIVDLINFSEI-SVNAEAKTAWVQ 120 (466)
Q Consensus 42 r~~~~~~~~p~~vv~p~~~~dV~~~v~~a~~~~~~~~vr~gGh~~~g~s~~~~~~~~~idl~~l~~v-~~d~~~~~~~vg 120 (466)
.|+......|.+||+|+|++||+++|++| +++.+||||||+.+.+.. +.++++|||++||+| ++|++.++++||
T Consensus 12 ~w~~~~~~~p~~v~~P~s~~ev~~~v~~a----~~v~~~G~G~s~~~~~~~-~~~g~vi~l~~l~~i~~~d~~~~~v~v~ 86 (422)
T 2vfr_A 12 NWAGNITYTAKELLRPHSLDALRALVADS----ARVRVLGSGHSFNEIAEP-GDGGVLLSLAGLPSVVDVDTAARTVRVG 86 (422)
T ss_dssp CSSSSCBCSCSSCBCCSSHHHHHHHHHHC----SSEEECSSCCCCSSTTCC-CTTCEEECSTTSCCCEEEETTTTEEEEE
T ss_pred cCCCCccCCCCEEEeCCCHHHHHHHHHhC----CCEEEEECCCCCCCCccC-CCCcEEEEhhhCCCcEEEcCCCCEEEEc
Confidence 46655556899999999999999999998 899999999999887662 224899999999997 899999999999
Q ss_pred CCCcHHHHHHHHHHhCCCceeec-CCCCCCceEeeeccCCCcCCccchh--------------------------hHHHH
Q 048047 121 SGATVGQLNYRIAEKSQNLLAFP-VGTCPGVAVGGHFSGGGYGALLRKY--------------------------DLFWA 173 (466)
Q Consensus 121 ~G~~~~~v~~~l~~~g~~~l~~~-~G~~~~vg~gG~~lgGG~g~~s~~~--------------------------dLfwa 173 (466)
+|+++.+|+++|.++|. .++ .|.++.++|||.+.+|++|.. .+| .-||+
T Consensus 87 aG~~l~~l~~~l~~~Gl---~l~~~~~~~~~tvGG~i~~~~~G~~-~~~G~~~d~v~~~~vv~~~G~~~~~~~~~~~f~~ 162 (422)
T 2vfr_A 87 GGVRYAELARVVHARGL---ALPNMASLPHISVAGSVATGTHGSG-VGNGSLASVVREVELVTADGSTVVIARGDERFGG 162 (422)
T ss_dssp TTCBHHHHHHHHHHTTE---ECSCCCSSSCSBHHHHHHHTCCCCC-TTCCCGGGGEEEEEEECTTSCEEEEETTSTTGGG
T ss_pred CCCCHHHHHHHHHHcCC---cccCCCCCCCeeHHHHHhcCCCCCC-cccCcHHHheEEEEEEeCCCCEEEeCCCCCCcce
Confidence 99999999999999984 566 488888999999999999964 344 22999
Q ss_pred HhhcCCCceEEEEEEEEEEEecCcee
Q 048047 174 IRGGGGPSFGIIISWKIELVDVPSTV 199 (466)
Q Consensus 174 lrG~g~~~fGvVt~~~~k~~p~~~~~ 199 (466)
++|++ |+|||||++|||++|.|+..
T Consensus 163 ~~g~~-G~lGvit~~~l~l~p~~~~~ 187 (422)
T 2vfr_A 163 AVTSL-GALGVVTSLTLDLEPAYEME 187 (422)
T ss_dssp TSSCT-TTTCEEEEEEEECEECCEEE
T ss_pred EEecC-CCCEEEEEEEEEEEecCceE
Confidence 99998 79999999999999998743
No 17
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=99.94 E-value=3.7e-27 Score=248.41 Aligned_cols=207 Identities=18% Similarity=0.235 Sum_probs=150.3
Q ss_pred hHHHHHhhcCCCCCceEEcCCCCCchHHhhhcccccccCCC--CCCCCCEEEecCCHHHHHHHHHHHHhcCCcEEEeccc
Q 048047 6 NFLKCLSLQSDTISKVIYTQNNSSYSSVLKSSIQNLVFSTP--TNQKPPFIITPFHVSEIQAAIKCSKKSGLQIRVRSGG 83 (466)
Q Consensus 6 ~~~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~--~~~~p~~vv~p~~~~dV~~~v~~a~~~~~~~~vr~gG 83 (466)
++.+++..+.+.+.+..+.+++..+..... .|+.. ....|.+||+|+|++||+++|++|+++++|+.+||||
T Consensus 16 ~~~~~~~~L~~~l~~~~v~~~~~~~~~y~~------d~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~pv~~~g~G 89 (520)
T 1wvf_A 16 EFNKAVQKFRALLGDDNVLVESDQLVPYNK------IMMPVENAAHAPSAAVTATTVEQVQGVVKICNEHKIPIWTISTG 89 (520)
T ss_dssp HHHHHHHHHHHHHCGGGEECSHHHHHHHHC------CCSSSCGGGGCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSC
T ss_pred HHHHHHHHHHHhcCCCeEecCcHHHHHHhc------ccccccccCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEEcCC
Confidence 344444444333354444445555443322 13221 2347999999999999999999999999999999999
Q ss_pred cCCC-CCcccCCCCeEEEEcCCCcce-EEcCCCCEEEEcCCCcHHHHHHHHHHhCCCceeecCC---CCCCceEeeeccC
Q 048047 84 HDLE-GLSSISDVPFIIVDLINFSEI-SVNAEAKTAWVQSGATVGQLNYRIAEKSQNLLAFPVG---TCPGVAVGGHFSG 158 (466)
Q Consensus 84 h~~~-g~s~~~~~~~~~idl~~l~~v-~~d~~~~~~~vg~G~~~~~v~~~l~~~g~~~l~~~~G---~~~~vg~gG~~lg 158 (466)
|++. |.+.....++++|||++||+| ++|+++.+++||||++|.+|+++|.++|.. ++.+ ....+|+||.+++
T Consensus 90 ~~~~~g~~~~~~~~gvvidl~~m~~i~~id~~~~~v~v~aGv~~~~l~~~l~~~Gl~---~~~~~~p~~~~~~igG~~~~ 166 (520)
T 1wvf_A 90 RNFGYGSAAPVQRGQVILDLKKMNKIIKIDPEMCYALVEPGVTFGQMYDYIQENNLP---VMLSFSAPSAIAGPVGNTMD 166 (520)
T ss_dssp CCTTTTTTSCSSTTCEEEECTTCCCEEEEETTTTEEEECTTCCHHHHHHHHHHTTCS---EECCCCSSCTTCCHHHHHHT
T ss_pred CCCCCCCCCCCCCCeEEEECCCCCceEEECCCCCEEEECCCCCHHHHHHHHHHcCCc---ccCCCCCCCCeeeeeecccC
Confidence 9986 654431124899999999998 999999999999999999999999999853 5443 3336889999888
Q ss_pred CCcCCccchh------------------------------hHHHHHhhcCC---------CceEEEEEEEEEEEecCcee
Q 048047 159 GGYGALLRKY------------------------------DLFWAIRGGGG---------PSFGIIISWKIELVDVPSTV 199 (466)
Q Consensus 159 GG~g~~s~~~------------------------------dLfwalrG~g~---------~~fGvVt~~~~k~~p~~~~~ 199 (466)
||.|.. +| |||++.|||.| ++|||||+++||++|.|+..
T Consensus 167 ~g~g~~--~yG~~~d~v~~~evV~~dG~v~~~~~~~~~~~~l~~~~~~~~Gy~l~~l~~g~~lGiVt~~~l~l~p~p~~~ 244 (520)
T 1wvf_A 167 RGVGYT--PYGEHFMMQCGMEVVLANGDVYRTGMGGVPGSNTWQIFKWGYGPTLDGMFTQANYGICTKMGFWLMPKPPVF 244 (520)
T ss_dssp TCBCSS--TTCBGGGGEEEEEEECTTSCEEECGGGGSTTCSCTTTCSCCSSCCCHHHHTTSSSCEEEEEEEECEECCSEE
T ss_pred CCcCCc--cccchhhcEeeeEEEcCCCcEEEeCCCcCCCchhHhhhcCCCCcchhhhccCCceEEEEEEEEEEEecCCeE
Confidence 887765 33 77777676642 59999999999999999865
Q ss_pred EEEEEecchhhhHHHHHHHHHHHH
Q 048047 200 TVFAVPRTLEQNATMLLHKWQYIA 223 (466)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~ 223 (466)
..+.+.|+..+++.++++.++.+.
T Consensus 245 ~~~~~~f~~~~~~~~~~~~~~~~~ 268 (520)
T 1wvf_A 245 KPFEVIFEDEADIVEIVDALRPLR 268 (520)
T ss_dssp EEEEEEECCGGGHHHHHHHHHHHH
T ss_pred EEEEEEeCCHHHHHHHHHHHHHHH
Confidence 555666653334445555555543
No 18
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=99.94 E-value=3.1e-26 Score=243.14 Aligned_cols=156 Identities=19% Similarity=0.279 Sum_probs=134.7
Q ss_pred CCCCCEEEecCCHHHHHHHHHHHHhcCCcEEEeccccCCCCCcccCC--CCeEEEEcCCCcce-EEcCCCCEEEEcCCCc
Q 048047 48 NQKPPFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGLSSISD--VPFIIVDLINFSEI-SVNAEAKTAWVQSGAT 124 (466)
Q Consensus 48 ~~~p~~vv~p~~~~dV~~~v~~a~~~~~~~~vr~gGh~~~g~s~~~~--~~~~~idl~~l~~v-~~d~~~~~~~vg~G~~ 124 (466)
...|.+||+|+|++||+++|++|+++++||.+||||||+.|.+...+ +++|+|||++||+| ++|+++.+|+||||++
T Consensus 135 ~~~p~~vv~P~s~eeV~~iv~~a~~~~~pv~~~GgGts~~gg~~~~~~~~g~vvidl~~mn~I~~id~~~~~v~v~aGv~ 214 (584)
T 2uuu_A 135 KNAPDLIVLPHSHEEVERLVQLAHKYNVVIIPMGGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACIQVGIM 214 (584)
T ss_dssp CCCCSEEECCCSHHHHHHHHHHHHHHTCEEEEESSCCCSSCTTSCCCCSSCEEEEECTTCCCEEEEETTTTEEEEETTCB
T ss_pred CCCCCEEEeCCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCcccCCCCCEEEEECCCCCccEEEcCCCCEEEECCCCc
Confidence 34799999999999999999999999999999999999887665421 25899999999998 8999999999999999
Q ss_pred HHHHHHHHHHhCCCceeecCCC--CCCceEeeeccCCCcCCccchh-------------------------------hHH
Q 048047 125 VGQLNYRIAEKSQNLLAFPVGT--CPGVAVGGHFSGGGYGALLRKY-------------------------------DLF 171 (466)
Q Consensus 125 ~~~v~~~l~~~g~~~l~~~~G~--~~~vg~gG~~lgGG~g~~s~~~-------------------------------dLf 171 (466)
|.+|+++|.++|. .++... ...+++||++++++.|..+.+| ||+
T Consensus 215 ~~~l~~~l~~~Gl---~~~~~p~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~~levVl~dG~i~~~~~~~~~~g~dl~ 291 (584)
T 2uuu_A 215 GPELEKQLHKQGV---SLGHDPDSFEFSTLGGWLATCSSGHQSDKYGDIEDMAVSFRTVTPTGTLELRNGARSGAGINYK 291 (584)
T ss_dssp HHHHHHHHHHTTE---ECCCCCTTGGGCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEECCC-------CCCTH
T ss_pred HHHHHHHHHHcCC---eeCcCCCccCCeeEeeeccCCCCcccccCcCcHHHheeeEEEEeCCCCEEECCccccCCCcchh
Confidence 9999999999984 454433 2346899999999999888777 999
Q ss_pred HHHhhcCCCceEEEEEEEEEEEecCceeEEEEEecc
Q 048047 172 WAIRGGGGPSFGIIISWKIELVDVPSTVTVFAVPRT 207 (466)
Q Consensus 172 walrG~g~~~fGvVt~~~~k~~p~~~~~~~~~~~~~ 207 (466)
|+++|++ |+|||||+++||++|.|+....+.+.|+
T Consensus 292 ~~~~Gse-GtlGIIT~~tlrl~p~p~~~~~~~~~f~ 326 (584)
T 2uuu_A 292 HIILGSE-GTLGIITEAVMKVHAVPQAVEYYGFLFP 326 (584)
T ss_dssp HHHTTCT-TSSCEEEEEEEECEECCSEEEEEEEEES
T ss_pred hhhccCC-CCcEEEEEEEEEEEecccceEEEEEEcC
Confidence 9999999 8999999999999999986555555554
No 19
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=99.91 E-value=1.5e-24 Score=229.83 Aligned_cols=169 Identities=12% Similarity=0.140 Sum_probs=136.5
Q ss_pred CceEEcC-CCCCchHHhhhcccccccCCCCCCCCCEEEecCCHHHHHHHHHHHHhcCCcEEEeccccCCCCCcccCC---
Q 048047 19 SKVIYTQ-NNSSYSSVLKSSIQNLVFSTPTNQKPPFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGLSSISD--- 94 (466)
Q Consensus 19 ~~~v~~p-~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~p~~~~dV~~~v~~a~~~~~~~~vr~gGh~~~g~s~~~~--- 94 (466)
++.|++| +++.|++... .|+......|.+||+|+|++||+++|++|+++++++.+||||||+.+.+...+
T Consensus 9 ~~~~~~p~~~~~y~~~~~------~w~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~v~~~G~G~s~~~~~l~~~~~~ 82 (561)
T 2i0k_A 9 PTPPNFPNDIALFQQAYQ------NWSKEIMLDATWVCSPKTPQDVVRLANWAHEHDYKIRPRGAMAGWTPLTVEKGANV 82 (561)
T ss_dssp CCCTTCCTTSCCEEEEEE------CTTSSSEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECCCCCCCTTSSCTTCCC
T ss_pred CCceecCCCCHhHHHHHh------hhhhccCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEECCCCCcccccccCCCcC
Confidence 6678899 9999997532 46655556899999999999999999999999999999999999876443321
Q ss_pred CCeEEEEc-CCCcceEEcC--CCCEEEEcCCCcHHHHHHHHHHhCCCceeecC-CCCCCceEeeeccC---------CCc
Q 048047 95 VPFIIVDL-INFSEISVNA--EAKTAWVQSGATVGQLNYRIAEKSQNLLAFPV-GTCPGVAVGGHFSG---------GGY 161 (466)
Q Consensus 95 ~~~~~idl-~~l~~v~~d~--~~~~~~vg~G~~~~~v~~~l~~~g~~~l~~~~-G~~~~vg~gG~~lg---------GG~ 161 (466)
.++++||| ++||+|++|+ +.++|+||+|+++.+|+++|.++|. .++. +..+.+.|||.+.. ||+
T Consensus 83 ~~gvvIdl~~~l~~i~vd~~~~~~~v~v~aGv~l~~L~~~l~~~Gl---~l~~~~~~~~~TvGG~i~~~~~G~~l~~gG~ 159 (561)
T 2i0k_A 83 EKVILADTMTHLNGITVNTGGPVATVTAGAGASIEAIVTELQKHDL---GWANLPAPGVLSIGGALAVNAHGAALPAVGQ 159 (561)
T ss_dssp TTEEEEECTTTSCCEEEECCSSSCEEEEETTSBHHHHHHHHHHTTE---ECSSCCSCTTCBHHHHHHTTCCCSCCCCTTC
T ss_pred CCeEEEechhhCCceEecCcCCccEEEEcCCCCHHHHHHHHHHcCC---cccccCCCCCcccCCCcccCCcccccccCCc
Confidence 24899999 8999999998 7899999999999999999999984 4543 23344566666644 555
Q ss_pred CCccch-h------------------------------hHHHHHhhcCCCceEEEEEEEEEEEecCcee
Q 048047 162 GALLRK-Y------------------------------DLFWAIRGGGGPSFGIIISWKIELVDVPSTV 199 (466)
Q Consensus 162 g~~s~~-~------------------------------dLfwalrG~g~~~fGvVt~~~~k~~p~~~~~ 199 (466)
|++++. | ||+|+++|.| + ||||++|||++|.++..
T Consensus 160 ~~~s~~~~G~~~d~V~~~evV~~dG~~~~~~~~~~~~~dl~~a~~g~G-~--giIt~~tl~l~p~~~~~ 225 (561)
T 2i0k_A 160 TTLPGHTYGSLSNLVTELTAVVWNGTTYALETYQRNDPRITPLLTNLG-R--CFLTSVTMQAGPNFRQR 225 (561)
T ss_dssp CCCTTCCSSCGGGGEEEEEEEEECSSSEEEEEEETTSGGGHHHHSCTT-S--SCEEEEEEECEECCEEE
T ss_pred ccccccccccHhheEEEEEEEeCCCCEEEeeeccCCCccHHHHHhcCC-C--EEEEEEEEEEEECCceE
Confidence 556443 5 8999999776 4 89999999999998743
No 20
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=99.90 E-value=5.7e-23 Score=217.98 Aligned_cols=171 Identities=18% Similarity=0.207 Sum_probs=133.5
Q ss_pred CCCCCEEEecCCHHHHHHHHHHHHhcCCcEEEeccccCCC-CCcccCCCCeEEEEc-CCCcce-EEcCCCCEEEEcCCCc
Q 048047 48 NQKPPFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLE-GLSSISDVPFIIVDL-INFSEI-SVNAEAKTAWVQSGAT 124 (466)
Q Consensus 48 ~~~p~~vv~p~~~~dV~~~v~~a~~~~~~~~vr~gGh~~~-g~s~~~~~~~~~idl-~~l~~v-~~d~~~~~~~vg~G~~ 124 (466)
...|.+||+|+|++||+++|++|+++++|+++||+||+.. |.+.....++|+||| ++||+| ++|++..+|+||||++
T Consensus 68 ~~~p~~Vv~P~s~~eV~~iv~~a~~~~~pv~~~g~Gt~~~~gg~~p~~~~gvvidl~~~mn~il~id~~~~~v~v~aGv~ 147 (560)
T 1e8g_A 68 YFLASAIVAPRNVADVQSIVGLANKFSFPLWPISIGRNSGYGGAAPRVSGSVVLDMGKNMNRVLEVNVEGAYCVVEPGVT 147 (560)
T ss_dssp SSCCSEEECCSSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTCCSSTTCEEEECTTTCCCEEEEETTTTEEEECTTCB
T ss_pred ccCCcEEEeCCCHHHHHHHHHHHHHcCCcEEEecCCCcCCcCCCCCCcCCEEEEEchHhcCCeEEEcCCCCEEEEeCCCC
Confidence 4579999999999999999999999999999999999975 544421114899999 999998 9999999999999999
Q ss_pred HHHHHHHHHHhCCCcee--ec--CCCCCCceEeeeccCCCcCCccchh----------------------------h---
Q 048047 125 VGQLNYRIAEKSQNLLA--FP--VGTCPGVAVGGHFSGGGYGALLRKY----------------------------D--- 169 (466)
Q Consensus 125 ~~~v~~~l~~~g~~~l~--~~--~G~~~~vg~gG~~lgGG~g~~s~~~----------------------------d--- 169 (466)
+.+|+++|.++|. . ++ .+.....++||.++++|.|.. +| +
T Consensus 148 ~~~l~~~l~~~Gl---~~~~~~~p~~~~~~tigG~~~~~g~g~~--~yG~~~d~v~~l~vVl~dG~v~~~~~~~~~~~~~ 222 (560)
T 1e8g_A 148 YHDLHNYLEANNL---RDKLWLDVPDLGGGSVLGNAVERGVGYT--PYGDHWMMHSGMEVVLANGELLRTGMGALPDPKR 222 (560)
T ss_dssp HHHHHHHHHHTTC---TTTEECCCCSSTTSBHHHHHHTTCBCSS--TTCBTGGGEEEEEEEETTSCEEECGGGGSCCCCC
T ss_pred HHHHHHHHHHcCC---ccccCCCCCCCCccchhhhccCCCCCcc--cceeHHHheeeeEEEeCCCCEEEecCcccCcccc
Confidence 9999999999985 4 32 234345678998887777664 33 2
Q ss_pred --------------HHHHHhhcC----------CCceEEEEEEEEEEEecCceeEEEEEecchhhhHHHHHHHHHHHH
Q 048047 170 --------------LFWAIRGGG----------GPSFGIIISWKIELVDVPSTVTVFAVPRTLEQNATMLLHKWQYIA 223 (466)
Q Consensus 170 --------------LfwalrG~g----------~~~fGvVt~~~~k~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (466)
++|+++++| +|+|||||++|||++|.|+....+.+.|+...++.+++..+.++.
T Consensus 223 ~~~~~~~l~~~~~~~~~~~~~~g~Gy~l~~L~~~GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~a~~~~~~~~~~~ 300 (560)
T 1e8g_A 223 PETMGLKPEDQPWSKIAHLFPYGFGPYIDGLFSQSNMGIVTKIGIWLMPNPGGYQSYLITLPKDGDLKQAVDIIRPLR 300 (560)
T ss_dssp GGGTTCCGGGSCCCTTTTTCSCCSSCCCGGGGSSSSSEEEEEEEEECEECCSCEEEEEEEECSTTHHHHHHHHHHHHH
T ss_pred cccccchhhhhhhhcccccccccCCcchhcccccCcEEEEEEEEEEEEeCCCceEEEEEEcCCHHHHHHHHHHHHHHH
Confidence 577776542 379999999999999999865556666653334455555555554
No 21
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=99.89 E-value=3.7e-23 Score=215.08 Aligned_cols=152 Identities=14% Similarity=0.194 Sum_probs=122.4
Q ss_pred ccCCCCCCCCCEEEecCCHHHHHHHHHHHHhcCCcEEEeccccCCCCCcccC---CCCeEEEEcC-CCcceEEcCC--CC
Q 048047 42 VFSTPTNQKPPFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGLSSIS---DVPFIIVDLI-NFSEISVNAE--AK 115 (466)
Q Consensus 42 r~~~~~~~~p~~vv~p~~~~dV~~~v~~a~~~~~~~~vr~gGh~~~g~s~~~---~~~~~~idl~-~l~~v~~d~~--~~ 115 (466)
.|+......|.+||+|+|++||+++|++|++++++|.++|||||+.+.+... .+++++|||+ +||+|++|++ ..
T Consensus 21 nWs~~~~~~P~~vv~P~s~eEV~~~Vk~A~~~~~pv~v~GgGhs~~~l~~~gG~~~~~GVvIdls~~Ln~I~vD~~~~~~ 100 (540)
T 3js8_A 21 NWAGDIKVDDVWTCAPRSADEVVKVANWAKDNGYKVRARGMMHNWSPLTLAAGVSCPAVVLLDTTRYLTAMSIDASGPVA 100 (540)
T ss_dssp CTTSCCEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECSCCCSSCSSCCTTCSSCSEEEEETTTTCCCEEEECSSSSE
T ss_pred ccccccCCCccEEEEcCCHHHHHHHHHHHHHcCCeEEEEeCCCCcccccccCCCCCCCeEEEECcCcCCCEEECCCCCcc
Confidence 4776666789999999999999999999999999999999999985322111 1248999995 7999999985 58
Q ss_pred EEEEcCCCcHHHHHHHHHHhCCCceeecC-CCCCCceEeeeccCCCcCCc----------cchh----------------
Q 048047 116 TAWVQSGATVGQLNYRIAEKSQNLLAFPV-GTCPGVAVGGHFSGGGYGAL----------LRKY---------------- 168 (466)
Q Consensus 116 ~~~vg~G~~~~~v~~~l~~~g~~~l~~~~-G~~~~vg~gG~~lgGG~g~~----------s~~~---------------- 168 (466)
+|+||+|+++.+|+++|.++| |+++. +.++.++|||.+.+|++|.. +++|
T Consensus 101 tVtV~AGv~l~~L~~~L~~~G---L~l~~~~gi~~~TVGGaia~gagG~~~~~~G~~~~~g~~~G~~~D~V~~levV~ad 177 (540)
T 3js8_A 101 KVTAQAGITMEALLTGLEKAG---LGVTAAPAPGDLTLGGVLAINGHGTAIPAKGERRLAGASYGSISNLVLSLTAVVYD 177 (540)
T ss_dssp EEEEETTSBHHHHHHHHHHTT---EECSCCCSCSCSBHHHHHHTTCCCCBCCCTTCCCCTTCCSSCGGGGEEEEEEEEEE
T ss_pred EEEEccCCCHHHHHHHHHHcC---CEEEecCCCCCeEEcccccCCCCcccccccccccccccccccHHHhEEEEEEEcCC
Confidence 999999999999999999998 45652 44577899999998877763 3344
Q ss_pred ----------------hHHHHHhhcCCCceEEEEEEEEEEEecCcee
Q 048047 169 ----------------DLFWAIRGGGGPSFGIIISWKIELVDVPSTV 199 (466)
Q Consensus 169 ----------------dLfwalrG~g~~~fGvVt~~~~k~~p~~~~~ 199 (466)
||||+ |+|. |+ ||||++|||++|.++..
T Consensus 178 G~~~~~~i~~~s~~~~DL~a~-r~G~-G~-gIVTevtlrl~P~~~l~ 221 (540)
T 3js8_A 178 KASGAYALRKFARNDPQIAPL-LAHV-GR-SLIVEATLQAAPNQRLR 221 (540)
T ss_dssp TTTTEEEEEEEETTSGGGHHH-HTCT-TS-SCEEEEEEEEEECCEEE
T ss_pred CCCceeeEEEeCCCChhHHHH-HhcC-CC-eEEEEEEEEEEECCceE
Confidence 77555 5555 35 69999999999998743
No 22
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=99.89 E-value=8.8e-23 Score=215.30 Aligned_cols=154 Identities=14% Similarity=0.228 Sum_probs=123.6
Q ss_pred CCCCCEEEecCCHHHHHHHHHHHHhcCCcEEEeccccCCCCCcccCCC----CeEEEEcCCCcce-EEcCCCCEEEEcCC
Q 048047 48 NQKPPFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGLSSISDV----PFIIVDLINFSEI-SVNAEAKTAWVQSG 122 (466)
Q Consensus 48 ~~~p~~vv~p~~~~dV~~~v~~a~~~~~~~~vr~gGh~~~g~s~~~~~----~~~~idl~~l~~v-~~d~~~~~~~vg~G 122 (466)
...|.+||+|+|++||+++|++|++++++|.+|||||++.|.+...++ ++++|||++||+| ++|+ .++|+||||
T Consensus 43 ~~~p~~Vv~P~s~~eV~~iv~~a~~~~~~v~~~GgGt~~~G~~~~~~~~~~r~gvvIdl~rmn~I~~id~-~~~v~v~aG 121 (571)
T 1f0x_A 43 QGDALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLTEGSTPNGNDYDRDVVIISTLRLDKLHVLGK-GEQVLAYPG 121 (571)
T ss_dssp BBCCSEEECCSSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTSCCBSCCSSCEEEEECTTCCCEEEETT-TTEEEECTT
T ss_pred CCCccEEEeeCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCccCCCcCCcCceEEEECcccCCceeECC-CCeEEEcCC
Confidence 357999999999999999999999999999999999999887766431 3899999999998 6995 579999999
Q ss_pred CcHHHHHHHHHHhCCCceeec---CCCCCCceEeeeccCCCcCCccch--------------------------------
Q 048047 123 ATVGQLNYRIAEKSQNLLAFP---VGTCPGVAVGGHFSGGGYGALLRK-------------------------------- 167 (466)
Q Consensus 123 ~~~~~v~~~l~~~g~~~l~~~---~G~~~~vg~gG~~lgGG~g~~s~~-------------------------------- 167 (466)
+++.+|+++|.++|+ .++ +++|..+.+||.+..++.|..+.+
T Consensus 122 v~l~~L~~~l~~~Gl---~~p~~~g~s~~~~tvGG~ia~nagG~~~~~yG~~~d~~~~~~~~~~~~l~~~~vl~levVl~ 198 (571)
T 1f0x_A 122 TTLYSLEKALKPLGR---EPHSVIGSSCIGASVIGGICNNSGGSLVQRGPAYTEMSLFARINEDGKLTLVNHLGIDLGET 198 (571)
T ss_dssp CBHHHHHHHHGGGTE---ECSCCCGGGGGTCBHHHHHHTTCCCSCTTSCSSCCSCEEEEEECTTSCEEEEECSSBCCCSS
T ss_pred cCHHHHHHHHHhcCc---cCCcCCCccCCCceecccccCCCCcccccCCCchhhhhhhheeccCCceEEEEeeeEEEEcC
Confidence 999999999999984 342 245555567787766555442221
Q ss_pred -----------------------------h-----------------hHHHHH--hhcCCCceEEEEEEEEEEEecCcee
Q 048047 168 -----------------------------Y-----------------DLFWAI--RGGGGPSFGIIISWKIELVDVPSTV 199 (466)
Q Consensus 168 -----------------------------~-----------------dLfwal--rG~g~~~fGvVt~~~~k~~p~~~~~ 199 (466)
| ||+|++ +|++ |+||| |++|+|++|.|+..
T Consensus 199 dG~i~~~~~~~~~~~~~~~~~~~~k~~~Gy~~~~~~~d~~~p~~~~~Dl~~l~~a~Gse-GtlGV-t~~tl~l~p~p~~~ 276 (571)
T 1f0x_A 199 PEQILSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTPARYNADPDRLFESSGCA-GKLAV-FAVRLDTFEAEKNQ 276 (571)
T ss_dssp HHHHHHHHHTTCCCGGGBCCCSCCSSCTTHHHHHHCTTCSSCSCCTTCGGGCCSSTTCT-TSSEE-EEEEEECEECCSSC
T ss_pred CCcEEEecCccccccchhhhcccccccCCcccccccccccccccccccHHHHHHhcCCC-CceeE-EEEEEEEEecCCeE
Confidence 2 566666 8998 79999 99999999999865
Q ss_pred EEEEEecc
Q 048047 200 TVFAVPRT 207 (466)
Q Consensus 200 ~~~~~~~~ 207 (466)
..+.+.++
T Consensus 277 ~~~~~~~~ 284 (571)
T 1f0x_A 277 QVFYIGTN 284 (571)
T ss_dssp EEEEEEES
T ss_pred EEEEEEeC
Confidence 55555554
No 23
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=99.85 E-value=5e-22 Score=195.49 Aligned_cols=146 Identities=17% Similarity=0.143 Sum_probs=119.3
Q ss_pred CCCCCEEEecCCHHHHHHHHHHHHhcCCcEEEeccccCCCCCcccCCCCeEEEEcCCCcceEEcCCCCEEEEcCCCcHHH
Q 048047 48 NQKPPFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGLSSISDVPFIIVDLINFSEISVNAEAKTAWVQSGATVGQ 127 (466)
Q Consensus 48 ~~~p~~vv~p~~~~dV~~~v~~a~~~~~~~~vr~gGh~~~g~s~~~~~~~~~idl~~l~~v~~d~~~~~~~vg~G~~~~~ 127 (466)
...|.++|+|+|++||+++|++|+++++|+.++||||++.+..... ++++|||++|++|.+|. .+++||||++|.+
T Consensus 52 gg~p~~vv~P~s~eev~~~v~~a~~~~~pv~v~GgGsnl~~~~~~~--~gvvI~l~~~~~I~~d~--~~v~v~aG~~~~~ 127 (322)
T 3tx1_A 52 GGAADVFVMPKTIEEAQEVVAYCHQNKIPLTILGNGSNLIIKDGGI--RGVILHLDLLQTIERNN--TQIVAMSGAKLID 127 (322)
T ss_dssp CCEEEEEEECSSHHHHHHHHHHHHHTTCCEEEESCCTTEEECTTCE--EEEEEECTTCCCEEEET--TEEEEETTSBHHH
T ss_pred CceeeEEEEeCCHHHHHHHHHHHHHcCCcEEEECCccCCCcCCCCC--CeEEEECCCCCcEEECC--CEEEEecCcCHHH
Confidence 3479999999999999999999999999999999999976443222 38999999999999864 5999999999999
Q ss_pred HHHHHHHhCCCceeecCCCCCCceEeeeccCCCcCCccchh-------------------hHHHHHhhcCC-CceEEEEE
Q 048047 128 LNYRIAEKSQNLLAFPVGTCPGVAVGGHFSGGGYGALLRKY-------------------DLFWAIRGGGG-PSFGIIIS 187 (466)
Q Consensus 128 v~~~l~~~g~~~l~~~~G~~~~vg~gG~~lgGG~g~~s~~~-------------------dLfwalrG~g~-~~fGvVt~ 187 (466)
|++++.++|..|+.+..|.+.+||-+..+.+||||-....+ |++|++|++.- +++||||+
T Consensus 128 l~~~l~~~Gl~Gle~~~giPgTVGGav~~NaGgyGg~~~d~v~~vevV~~~G~i~~~~~~~~~~~yR~s~~g~~~~IIt~ 207 (322)
T 3tx1_A 128 TAKFALNESLSGLEFACGIPGSIGGALHMNAGAYGGEISDVLEAATVLTQTGELKKLKRSELKAAYRFSTIAEKNYIVLD 207 (322)
T ss_dssp HHHHHHHTTEESCGGGTTCCSBHHHHHHHTCEETTEEHHHHEEEEEEECTTSCEEEEEGGGCC--CC-CTTTGGGCEEEE
T ss_pred HHHHHHHcCCcccccCCCCcchhHHHHHhCccCcccchHhhEEEEEEEcCCCCEEEechHHcCcchhhcccCCCCEEEEE
Confidence 99999999965566888998888765556678887322222 99999999853 46899999
Q ss_pred EEEEEEecCc
Q 048047 188 WKIELVDVPS 197 (466)
Q Consensus 188 ~~~k~~p~~~ 197 (466)
++||++|.|+
T Consensus 208 ~tl~L~p~~~ 217 (322)
T 3tx1_A 208 ATFSLALEEK 217 (322)
T ss_dssp EEEECEECCH
T ss_pred EEEEEEeCCH
Confidence 9999999874
No 24
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=99.80 E-value=2.3e-20 Score=184.74 Aligned_cols=140 Identities=19% Similarity=0.272 Sum_probs=112.0
Q ss_pred CCCCCEEEecCCHHHHHHHHHHHHhcCCcEEEeccccCCCCCcccCCCCeEEEEcCCCcceEEcCCCCEEEEcCCCcHHH
Q 048047 48 NQKPPFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGLSSISDVPFIIVDLINFSEISVNAEAKTAWVQSGATVGQ 127 (466)
Q Consensus 48 ~~~p~~vv~p~~~~dV~~~v~~a~~~~~~~~vr~gGh~~~g~s~~~~~~~~~idl~~l~~v~~d~~~~~~~vg~G~~~~~ 127 (466)
...|.+||+|+|++||+++|++|+++++|+.++||||++.+.....+ +++|||++||+|++|. .+++||||++|.+
T Consensus 46 ~~~p~~vv~P~s~eev~~~l~~a~~~~~pv~~~GgGtnl~~~~~~~~--gvvI~l~~m~~i~id~--~~v~v~aGv~~~~ 121 (326)
T 1hsk_A 46 GGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIREGGIR--GIVISLLSLDHIEVSD--DAIIAGSGAAIID 121 (326)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHHHHTTCCEEEESSCSSEEECTTCEE--EEEEECTTCCCEEEET--TEEEEETTSBHHH
T ss_pred CCcceEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCccccCCCCCC--eEEEEeCCCCceEEcC--CEEEEeCCCcHHH
Confidence 34699999999999999999999999999999999999765443333 8999999999999973 6999999999999
Q ss_pred HHHHHHHhCCCceeecCCCCCCceEeeecc--CCCcCCccchh-------------------hHHHHHhhcC---CCceE
Q 048047 128 LNYRIAEKSQNLLAFPVGTCPGVAVGGHFS--GGGYGALLRKY-------------------DLFWAIRGGG---GPSFG 183 (466)
Q Consensus 128 v~~~l~~~g~~~l~~~~G~~~~vg~gG~~l--gGG~g~~s~~~-------------------dLfwalrG~g---~~~fG 183 (466)
|++++.++|..||....|...+ +||.+. .||||...+.+ |++|++|+.. .| |
T Consensus 122 l~~~l~~~Gl~gLe~~~~~Pgt--vGG~i~~naggyG~~~~d~v~~v~vv~~~G~i~~~~~~~~~~gyr~~~l~s~g--g 197 (326)
T 1hsk_A 122 VSRVARDYALTGLEFACGIPGS--IGGAVYMNAGAYGGEVKDCIDYALCVNEQGSLIKLTTKELELDYRNSIIQKEH--L 197 (326)
T ss_dssp HHHHHHHTTEESCGGGTTCCSB--HHHHHHHTCEETTEEHHHHEEEEEEECTTSCEEEEETTTTTCBTTBCHHHHTT--C
T ss_pred HHHHHHHCCCccccccCCCcch--hhHHHhcccccCchhhhhhEEEEEEEeCCCCEEEEChHHcCCCccccccCCCC--E
Confidence 9999999986444455555555 455543 56777222222 8999988732 13 9
Q ss_pred EEEEEEEEEEec
Q 048047 184 IIISWKIELVDV 195 (466)
Q Consensus 184 vVt~~~~k~~p~ 195 (466)
|||+++||++|.
T Consensus 198 IIt~~~l~l~p~ 209 (326)
T 1hsk_A 198 VVLEAAFTLAPG 209 (326)
T ss_dssp EEEEEEEECEEC
T ss_pred EEEEEEEEEEcC
Confidence 999999999998
No 25
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=99.77 E-value=1.7e-19 Score=179.22 Aligned_cols=146 Identities=11% Similarity=0.025 Sum_probs=117.4
Q ss_pred CCCCCEEEecCCHHHHHHHHHHHHhcCCcEEEeccccCCCCCcccCCCCeEEEEcCCCcceEEcC--CCCEEEEcCCCcH
Q 048047 48 NQKPPFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGLSSISDVPFIIVDLINFSEISVNA--EAKTAWVQSGATV 125 (466)
Q Consensus 48 ~~~p~~vv~p~~~~dV~~~v~~a~~~~~~~~vr~gGh~~~g~s~~~~~~~~~idl~~l~~v~~d~--~~~~~~vg~G~~~ 125 (466)
...|.++|+|+|++||+++|++|+++++|+.++||||+..+... . +|++|+|+ |++|+++. +..+++||+|++|
T Consensus 28 gg~a~~vv~p~s~eel~~~v~~a~~~~ipv~vlGgGSNll~~d~-~--~GvVI~l~-~~~i~v~~~~~~~~v~v~AG~~~ 103 (357)
T 3i99_A 28 EQLAAQLVVAESIDDLKALYCSAEWASLPKLIIGKGSNMLFTCH-Y--TGMIVVNR-LNGIEHQQDDDYHRLHVAGGEDW 103 (357)
T ss_dssp SCEEEEEEEECSHHHHHHHHSSSTTTTSCEEEESSCTTEEECSC-E--EEEEEEEC-CCCEEEEECSSEEEEEEETTSBH
T ss_pred CccceEEEEECCHHHHHHHHHHHHHcCCCEEEECCCcCcccCCC-C--CeEEEEcC-CCceEEeccCCceEEEEeCCCcH
Confidence 34678999999999999999999999999999999999754433 3 38999999 99998853 4569999999999
Q ss_pred HHHHHHHHHhCCCceeecCCCCCCceEeeeccCCCcCCccchh--------------------hHHHHHhhcCC----Cc
Q 048047 126 GQLNYRIAEKSQNLLAFPVGTCPGVAVGGHFSGGGYGALLRKY--------------------DLFWAIRGGGG----PS 181 (466)
Q Consensus 126 ~~v~~~l~~~g~~~l~~~~G~~~~vg~gG~~lgGG~g~~s~~~--------------------dLfwalrG~g~----~~ 181 (466)
.+|.+++.++|..|+....|..++||-+=.+..|.||.-...+ ||+|++|+++. ++
T Consensus 104 ~~l~~~a~~~Gl~GlE~l~gIPGtVGGav~~NaGaYG~e~~d~v~~vevv~~~~G~i~~~~~~dl~f~YR~s~~~~~~g~ 183 (357)
T 3i99_A 104 PSLVSWCVEQGIGGLENLALIPGCAGSAPIQNIGAYGVEFKDVCDYVEYLCLETGTVKRLTMEECQFGYRDSIFKHQLYQ 183 (357)
T ss_dssp HHHHHHHHHTTCTTCGGGTTCCSBGGGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEETGGGCCBTTBCGGGTTTTT
T ss_pred HHHHHHHHHcCCcCccccCCCCchhHHHHHhchhhhhhhHHhhEeEEEEEECCCCcEEEEeHHHcCcccccccCCCccCC
Confidence 9999999999976666777777665543333345566422211 99999999863 37
Q ss_pred eEEEEEEEEEEEecCc
Q 048047 182 FGIIISWKIELVDVPS 197 (466)
Q Consensus 182 fGvVt~~~~k~~p~~~ 197 (466)
+||||+++||++|.++
T Consensus 184 ~gIIt~v~f~L~p~~~ 199 (357)
T 3i99_A 184 KAVVTAVGLKFAKAWQ 199 (357)
T ss_dssp TEEEEEEEEEEESSCC
T ss_pred CEEEEEEEEEEEeCCc
Confidence 9999999999999764
No 26
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=99.74 E-value=3.1e-18 Score=169.72 Aligned_cols=145 Identities=12% Similarity=0.017 Sum_probs=118.0
Q ss_pred CCCCEEEecCCHHHHHHHHHHHHhcCCcEEEeccccCCCCCcccCCCCeEEEEcCCCcceE-EcCCC-CEEEEcCCCcHH
Q 048047 49 QKPPFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGLSSISDVPFIIVDLINFSEIS-VNAEA-KTAWVQSGATVG 126 (466)
Q Consensus 49 ~~p~~vv~p~~~~dV~~~v~~a~~~~~~~~vr~gGh~~~g~s~~~~~~~~~idl~~l~~v~-~d~~~-~~~~vg~G~~~~ 126 (466)
..|.++|+|+|++||+++|++|+++++|+.++||||+..+... . +|++|+|+ |+++. ++.+. .+++||+|++|.
T Consensus 13 g~a~~~v~p~s~eel~~~l~~a~~~~~pv~vlGgGSnll~~d~-~--~GvVI~l~-~~~i~~i~~~~~~~v~vgAG~~~~ 88 (340)
T 1uxy_A 13 HNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLFLED-Y--RGTVIINR-IKGIEIHDEPDAWYLHVGAGENWH 88 (340)
T ss_dssp CBEEEEEEESSHHHHHHHHHHHHHTTCCEEEESSCTTEEECSC-E--EEEEEEEC-CCCEEEEECSSEEEEEEETTSBHH
T ss_pred ccccEEEEeCCHHHHHHHHHHHHHcCCCEEEECCCcCCcccCC-C--CeEEEEcc-CCCcEEEecCCCeEEEEecCCCHH
Confidence 3688999999999999999999999999999999999765432 2 38999997 99986 56666 699999999999
Q ss_pred HHHHHHHHhCCCceeecCCCCCCceEeeeccCCCcCCccchh--------------------hHHHHHhhcCC----Cce
Q 048047 127 QLNYRIAEKSQNLLAFPVGTCPGVAVGGHFSGGGYGALLRKY--------------------DLFWAIRGGGG----PSF 182 (466)
Q Consensus 127 ~v~~~l~~~g~~~l~~~~G~~~~vg~gG~~lgGG~g~~s~~~--------------------dLfwalrG~g~----~~f 182 (466)
+|.+++.++|..|+....|...+||-+-.+..|+||.....+ |++|++|++.. +++
T Consensus 89 ~l~~~~~~~Gl~Gle~~~gIPGtVGGa~~~NaGayG~ei~d~v~~v~vv~~~~G~v~~~~~~d~~~gYR~s~~~~~~~~~ 168 (340)
T 1uxy_A 89 RLVKYTLQEGMPGLENLALIPGCVGSSPIQNIGAYGVELQRVCAYVDSVELATGKQVRLTAKECRFGYRDSIFKHEYQDR 168 (340)
T ss_dssp HHHHHHHHTTCCSCGGGTTCCSBGGGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEETGGGTCBTTBCGGGTTTTTT
T ss_pred HHHHHHHHCCCCccccccCCccchhHHHHhccccchhhHHhheeEEEEEECCCCcEEEEeHHHhccccCcCccCCcCCCC
Confidence 999999999976677777777776654444566777422222 99999998741 369
Q ss_pred EEEEEEEEEEEecCc
Q 048047 183 GIIISWKIELVDVPS 197 (466)
Q Consensus 183 GvVt~~~~k~~p~~~ 197 (466)
||||+++||++|.++
T Consensus 169 gIVt~v~~~L~~~~~ 183 (340)
T 1uxy_A 169 FAIVAVGLRLPKEWQ 183 (340)
T ss_dssp EEEEEEEEEEESSCC
T ss_pred EEEEEEEEEEEcCCC
Confidence 999999999999864
No 27
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=99.63 E-value=1e-16 Score=153.44 Aligned_cols=134 Identities=19% Similarity=0.169 Sum_probs=105.5
Q ss_pred CCCEEEecCCHHHHHHHHHHHHhcCCcEEEeccccCCCCCcccCCCCeEEEEcCCCcceEEcCCCCEEEEcCCCcHHHHH
Q 048047 50 KPPFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGLSSISDVPFIIVDLINFSEISVNAEAKTAWVQSGATVGQLN 129 (466)
Q Consensus 50 ~p~~vv~p~~~~dV~~~v~~a~~~~~~~~vr~gGh~~~g~s~~~~~~~~~idl~~l~~v~~d~~~~~~~vg~G~~~~~v~ 129 (466)
.|. +|+|+|++||+++| ++|+.++||||+..+...+.. ++++|+|++|++|++|. +||+|++|.+|.
T Consensus 22 ~a~-vv~p~s~edv~~~v------~ipv~v~GgGsnll~~d~~~~-~GvVI~l~~~~~I~vd~-----~v~aG~~~~~l~ 88 (268)
T 2gqt_A 22 PAE-LWTVETREELKRAT------EAPYRVLGNGSNLLVLDEGVP-ERVIRLAGEFQTYDLKG-----WVGAGTLLPLLV 88 (268)
T ss_dssp EEE-EEEECSHHHHHHHT------TSCEEECSSSSSEEECTTCCS-SEEEEECGGGGCBCTTS-----EEETTSBHHHHH
T ss_pred ceE-EEEeCCHHHHHHHh------CCCeEEcCCCcCceecCCCcC-CeEEEEcCCCCCcEEcC-----EEECCCCHHHHH
Confidence 355 99999999999999 999999999999765433221 38999999999998762 999999999999
Q ss_pred HHHHHhCCCceeecCCCCCCceEeeeccCCCcCCccchh------------------hHHHHHhhcCCCceEEEEEEEEE
Q 048047 130 YRIAEKSQNLLAFPVGTCPGVAVGGHFSGGGYGALLRKY------------------DLFWAIRGGGGPSFGIIISWKIE 191 (466)
Q Consensus 130 ~~l~~~g~~~l~~~~G~~~~vg~gG~~lgGG~g~~s~~~------------------dLfwalrG~g~~~fGvVt~~~~k 191 (466)
+++.++|..|+....|...+||-+-.+..|+||.....+ ||+|++|++.-..=||||+++||
T Consensus 89 ~~~~~~Gl~Gle~~~giPGtvGGav~~NaGayG~e~~d~v~~v~vv~~G~v~~~~~~~l~~~YR~s~~~~~gIVt~~~~~ 168 (268)
T 2gqt_A 89 QEAARAGLSGLEGLLGIPAQVGGAVKMNAGTRFGEMADALEAVEVFHDGAFHVYCPEELGFGYRKSHLPPGGIVTRVRLK 168 (268)
T ss_dssp HHHHHTTEESCGGGTTCCCBHHHHHHTTCEETTEEGGGGEEEEEEEETTEEEEECGGGSCCBTTBCCCSTTCEEEEEEEC
T ss_pred HHHHHcCCcCCccccCccchhHHHHHhccccCchhHHhheeEEEEECCCcEEEEchHHcccccCCCCcCCCceEEEEEEE
Confidence 999999965566667777776655555567777422222 99999999872111499999999
Q ss_pred EEecC
Q 048047 192 LVDVP 196 (466)
Q Consensus 192 ~~p~~ 196 (466)
++|.+
T Consensus 169 L~~~~ 173 (268)
T 2gqt_A 169 LKERP 173 (268)
T ss_dssp CEECC
T ss_pred EEeCC
Confidence 99974
No 28
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=99.43 E-value=1.2e-13 Score=128.26 Aligned_cols=92 Identities=22% Similarity=0.218 Sum_probs=73.9
Q ss_pred eEEcCCCCEEEEcCCCcHHHHHHHHHHhCCCceeecC--CCCCCceEeeeccCCCcC----Cc-----------------
Q 048047 108 ISVNAEAKTAWVQSGATVGQLNYRIAEKSQNLLAFPV--GTCPGVAVGGHFSGGGYG----AL----------------- 164 (466)
Q Consensus 108 v~~d~~~~~~~vg~G~~~~~v~~~l~~~g~~~l~~~~--G~~~~vg~gG~~lgGG~g----~~----------------- 164 (466)
+++|+++.+++||+|+++.+|+++|.++| +.+++ |+++. ++||++.+|++| ..
T Consensus 1 l~vd~~~~~v~V~aGv~l~~L~~~l~~~G---l~~~~~Pg~~~~-tVGG~v~~nagG~~yG~~D~V~~vevV~~dG~i~~ 76 (219)
T 2yvs_A 1 MEVHAADQYLVAPGEADLLEVHARLAGTG---LFPPFPPVELPG-GVGGLVARGGFAQTFFFPAEVLGLTFRTPKGRRVR 76 (219)
T ss_dssp CEEETTTTEEEEETTCCHHHHHHHHTTTT---EECSSCSEECTT-HHHHHHHTTCSSBSSCGGGGEEEEEEECTTSCEEE
T ss_pred CeEcCCCCEEEEcCCCcHHHHHHHHHHcC---CEEeccCCCCCC-chhheeccCcccccCCCccEEEEEEEEeCCCCEEE
Confidence 57899999999999999999999999988 45655 55565 899999987766 22
Q ss_pred -cc-------hhhHHHHHhhcCCCceEEEEEEEEEEEecCceeEEEEE
Q 048047 165 -LR-------KYDLFWAIRGGGGPSFGIIISWKIELVDVPSTVTVFAV 204 (466)
Q Consensus 165 -s~-------~~dLfwalrG~g~~~fGvVt~~~~k~~p~~~~~~~~~~ 204 (466)
++ .|||||+++|++ |+|||||+++||++|.|+....+..
T Consensus 77 ~~~~~~kn~~gydl~~~~~Gs~-G~lGIVt~~tlrl~p~~~~~~~~~~ 123 (219)
T 2yvs_A 77 AGGVVVKNVQGYDLVRLFVGSF-GLLGRAEEVVLRLRPGRAQAFLRRP 123 (219)
T ss_dssp EECSSCSSSSCSCHHHHHTTCT-TTTCEEEEEEEECEECSEEEEEEEE
T ss_pred ECCccccCCCCcchHHHhccCC-CceEEEEEEEEEEEECCcccEEEEE
Confidence 00 028999999998 7999999999999999885544333
No 29
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=96.25 E-value=0.002 Score=61.96 Aligned_cols=119 Identities=18% Similarity=0.120 Sum_probs=73.5
Q ss_pred CCCEEEecCCHHHHHHHHHHHHhcCCcEEEeccccCCCCC-cccCCCCeEEEEcCC---CcceEEcCCCCEEEEcCCCcH
Q 048047 50 KPPFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGL-SSISDVPFIIVDLIN---FSEISVNAEAKTAWVQSGATV 125 (466)
Q Consensus 50 ~p~~vv~p~~~~dV~~~v~~a~~~~~~~~vr~gGh~~~g~-s~~~~~~~~~idl~~---l~~v~~d~~~~~~~vg~G~~~ 125 (466)
.|--.++|+|.+|+.++++. ++.+..+.+||++.... .......+++||+++ |+.|+.+. ..++||+|+++
T Consensus 4 ~~~~~~~P~s~~ea~~ll~~---~~~~~~ilaGGT~ll~~~~~~~~~~~~lIdl~~i~eL~~i~~~~--~~l~iGA~~tl 78 (287)
T 1ffv_C 4 PRFEYHAPKSVGEAVALLGQ---LGSDAKLLAGGHSLLPMMKLRFAQPEHLIDINRIPELRGIREEG--STVVIGAMTVE 78 (287)
T ss_dssp CCCEEECCSSHHHHHHHHHH---HGGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEEET--TEEEEETTCBH
T ss_pred CcceEECCCCHHHHHHHHHh---cCCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcceEecC--CEEEEccCCcH
Confidence 45568999999999888764 34678999999994321 111011378999985 67787743 46999999999
Q ss_pred HHHHHH-HHHhCCCceee----cCCC-CC-CceEeeeccCCCcCCccchhhHHHHHhhcC
Q 048047 126 GQLNYR-IAEKSQNLLAF----PVGT-CP-GVAVGGHFSGGGYGALLRKYDLFWAIRGGG 178 (466)
Q Consensus 126 ~~v~~~-l~~~g~~~l~~----~~G~-~~-~vg~gG~~lgGG~g~~s~~~dLfwalrG~g 178 (466)
.++.+. +.+.+..+|.. ..|. .- ...+||.+..+- +.-|+.=++.--+
T Consensus 79 ~~l~~~~~~~~~~~~L~~a~~~~a~~qiRN~gTvGGni~~~~-----~~~D~~~~l~Al~ 133 (287)
T 1ffv_C 79 NDLISSPIVQARLPLLAEAAKLIADPQVRNRGTIGGDIAHGD-----PGNDHPALSIAVE 133 (287)
T ss_dssp HHHHHCHHHHHHCHHHHHHGGGSSCTTGGGTCBHHHHHHTCC-----TTCSHHHHHHHTT
T ss_pred HHHhhChHHHHHhHHHHHHHHHhCCHHHhcceechhhhccCC-----CcHHHHHHHHHcC
Confidence 999962 33333222221 1111 00 124677776652 1226666655555
No 30
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=94.42 E-value=0.043 Score=52.54 Aligned_cols=118 Identities=19% Similarity=0.163 Sum_probs=72.1
Q ss_pred CCCEEEecCCHHHHHHHHHHHHhcCCcEEEeccccCCCCC-cccCCCCeEEEEcCC---CcceEEcCCCCEEEEcCCCcH
Q 048047 50 KPPFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGL-SSISDVPFIIVDLIN---FSEISVNAEAKTAWVQSGATV 125 (466)
Q Consensus 50 ~p~~vv~p~~~~dV~~~v~~a~~~~~~~~vr~gGh~~~g~-s~~~~~~~~~idl~~---l~~v~~d~~~~~~~vg~G~~~ 125 (466)
.|--.++|+|.+|..++++ +++-+..+.+||++.... .........+||+++ |+.|+.+ .+.++||+++++
T Consensus 4 ~~~~~~~P~sl~ea~~ll~---~~~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~--~~~l~IGA~~t~ 78 (288)
T 1n62_C 4 GSFDYHRPKSIADAVALLT---KLGEDARPLAGGHSLIPIMKTRLATPEHLVDLRDIGDLVGIREE--GTDVVIGAMTTQ 78 (288)
T ss_dssp CCCEEECCSSHHHHHHHHH---HHGGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGSCEEEE--TTEEEEETTCBH
T ss_pred CceEEECcCCHHHHHHHHH---hcCCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcceEec--CCEEEEccCCcH
Confidence 3556889999999888775 334568889999994221 111111368999987 4667764 457999999999
Q ss_pred HHHHH--HHHHhCCCceeecCCCCCC------ceEeeeccCCCcCCccchhhHHHHHhhcC
Q 048047 126 GQLNY--RIAEKSQNLLAFPVGTCPG------VAVGGHFSGGGYGALLRKYDLFWAIRGGG 178 (466)
Q Consensus 126 ~~v~~--~l~~~g~~~l~~~~G~~~~------vg~gG~~lgGG~g~~s~~~dLfwalrG~g 178 (466)
.++.+ .+.++- .+|.-......+ ..+||.+..+. ..-|+.=++.--+
T Consensus 79 ~~l~~~~~~~~~~-p~L~~a~~~ia~~qiRN~gTiGGnl~~a~-----p~sD~~~~L~Al~ 133 (288)
T 1n62_C 79 HALIGSDFLAAKL-PIIRETSLLIADPQIRYMGTIGGNAANGD-----PGNDMPALMQCLG 133 (288)
T ss_dssp HHHHHCHHHHHHC-HHHHHHHTTSSCHHHHHHCBHHHHHHSCC-----TTCSHHHHHHHHT
T ss_pred HHHhcChHHHHHH-HHHHHHHHHhCCHHHHccccccchhccCC-----CchHHHHHHHHhC
Confidence 99984 444321 112211111112 14677776652 2227776666555
No 31
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=91.92 E-value=0.21 Score=48.17 Aligned_cols=79 Identities=6% Similarity=0.018 Sum_probs=54.4
Q ss_pred CCCEEEecCCHHHHHHHHHHHHhcCCcEEEeccccCCCCCc-ccCCCCeEEEEcCCC---cceEEcCCCCEEEEcCCCcH
Q 048047 50 KPPFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGLS-SISDVPFIIVDLINF---SEISVNAEAKTAWVQSGATV 125 (466)
Q Consensus 50 ~p~~vv~p~~~~dV~~~v~~a~~~~~~~~vr~gGh~~~g~s-~~~~~~~~~idl~~l---~~v~~d~~~~~~~vg~G~~~ 125 (466)
.+...++|+|.+|..++++ ++. ...+.+||++....- ........+||++++ +.|+.+ .+.++||++++.
T Consensus 9 ~~~~y~~P~sl~ea~~ll~---~~~-~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~--~~~l~IGA~vt~ 82 (305)
T 3nvz_B 9 ERVTWIQASTLKELLDLKA---QHP-EAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHG--PEGISFGAACAL 82 (305)
T ss_dssp SSCEEEECCSHHHHHHHHH---HCT-TCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEEC--SSEEEEETTCBH
T ss_pred CCeEEEccCCHHHHHHHHH---hCC-CCEEEECccHHHHHHhcCCCCCCEEEECCCChhhcceEEC--CCeEEEccCCcH
Confidence 4567899999999877653 332 357789999853210 001113678999975 556664 458999999999
Q ss_pred HHHHHHHHH
Q 048047 126 GQLNYRIAE 134 (466)
Q Consensus 126 ~~v~~~l~~ 134 (466)
.++.+.+.+
T Consensus 83 ~~l~~~~~~ 91 (305)
T 3nvz_B 83 SSVEKTLLE 91 (305)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999887653
No 32
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=91.57 E-value=0.22 Score=47.69 Aligned_cols=75 Identities=19% Similarity=0.231 Sum_probs=50.8
Q ss_pred CCEEEecCCHHHHHHHHHHHHhcCC-cEEEeccccCCCC-CcccCCCCeEEEEcCCCc---ceEEcCCCCEEEEcCCCcH
Q 048047 51 PPFIITPFHVSEIQAAIKCSKKSGL-QIRVRSGGHDLEG-LSSISDVPFIIVDLINFS---EISVNAEAKTAWVQSGATV 125 (466)
Q Consensus 51 p~~vv~p~~~~dV~~~v~~a~~~~~-~~~vr~gGh~~~g-~s~~~~~~~~~idl~~l~---~v~~d~~~~~~~vg~G~~~ 125 (466)
|--.++|+|.+|..+++ .+++- ...+.+||++... ..........+||++++. .|+. +.+.++||++++.
T Consensus 3 ~f~y~~P~sl~ea~~ll---~~~~~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~vt~ 77 (296)
T 3hrd_C 3 DFEFFAPKTLEEAKGLL---HQYKDVPPAIIAGGTDLVIEINDRWEKPDVVIDIKKLKELEYIRV--EENTIHIGALSTF 77 (296)
T ss_dssp CCEEECCSSHHHHHHHH---HHTTTSCCEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEE--CSSEEEEETTCBH
T ss_pred ceeEeCCCCHHHHHHHH---HhCCCCCeEEEECCcHHHHHhhcCCCCCCeEEEcccChhhcceEE--cCCeEEEccCCcH
Confidence 44678999999976654 44443 4667799999532 111111136889999865 4555 4568999999999
Q ss_pred HHHHH
Q 048047 126 GQLNY 130 (466)
Q Consensus 126 ~~v~~ 130 (466)
.++.+
T Consensus 78 ~~l~~ 82 (296)
T 3hrd_C 78 TQIEN 82 (296)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99974
No 33
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=91.53 E-value=0.22 Score=47.51 Aligned_cols=117 Identities=20% Similarity=0.149 Sum_probs=69.3
Q ss_pred CCCEEEecCCHHHHHHHHHHHHhcCCcEEEeccccCCCCC-cccCCCCeEEEEcCCC---cceEEcCCCCEEEEcCCCcH
Q 048047 50 KPPFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGL-SSISDVPFIIVDLINF---SEISVNAEAKTAWVQSGATV 125 (466)
Q Consensus 50 ~p~~vv~p~~~~dV~~~v~~a~~~~~~~~vr~gGh~~~g~-s~~~~~~~~~idl~~l---~~v~~d~~~~~~~vg~G~~~ 125 (466)
.|--.++|+|.+|..++++ + +-...+.+||++.... -........+||++++ +.|+.+ .+.++||+++++
T Consensus 4 ~~f~y~~P~sl~ea~~ll~---~-~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~--~~~l~IGA~vt~ 77 (288)
T 1t3q_C 4 PAFSYRAPASLQEVIQVLA---D-DPDARIIAGGQSLLPLLAFRLVYPSCLVDLRNVSELFEISQS--AGILSVGAMVTH 77 (288)
T ss_dssp CCCEEECCSSHHHHHHHHH---H-CTTCEEESSCTTHHHHHHTTCCCCSEEEECTTCGGGGCEEEE--TTEEEEETTCBH
T ss_pred CCceEECCCCHHHHHHHHh---h-CCCCEEEeCchhHHHHHhcCCCCCCEEEECCCChhhcCeEEc--CCEEEEcCCCcH
Confidence 4556889999999887765 2 2345677899994211 0000112588999985 567664 457999999999
Q ss_pred HHHHH--HHHHhCCCceeecCCCCCC------ceEeeeccCCCcCCccchhhHHHHHhhcC
Q 048047 126 GQLNY--RIAEKSQNLLAFPVGTCPG------VAVGGHFSGGGYGALLRKYDLFWAIRGGG 178 (466)
Q Consensus 126 ~~v~~--~l~~~g~~~l~~~~G~~~~------vg~gG~~lgGG~g~~s~~~dLfwalrG~g 178 (466)
.++.+ .+.++- ..|.-......+ ..+||.+..+ +..-|+.=+|---+
T Consensus 78 ~~l~~~~~~~~~~-p~L~~a~~~ias~qiRN~aTiGGNi~~a-----~p~sD~~~~L~Al~ 132 (288)
T 1t3q_C 78 FRNKTDPTVAKCV-PILPKVLAHVAHQAVRNRGTLGGSLAHA-----DAGAEMPFLMATLG 132 (288)
T ss_dssp HHHHHCHHHHHHC-THHHHHHTTSSCHHHHTTCBHHHHHHHT-----CTTCHHHHHHHHTT
T ss_pred HHHhcCHHHHHHH-HHHHHHHHHhCCHHHHcceechhhcccC-----CCcHHHHHHHHHcC
Confidence 99986 343322 111111112222 1356666543 12227777776666
No 34
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=91.12 E-value=0.19 Score=51.34 Aligned_cols=74 Identities=12% Similarity=0.072 Sum_probs=53.3
Q ss_pred EEecCCHHHHHHHHHHHHhcCCcEEEeccccCCCCC-cccCCCCeEEEEcCC---CcceEEcCCCCEEEEcCCCcHHHHH
Q 048047 54 IITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGL-SSISDVPFIIVDLIN---FSEISVNAEAKTAWVQSGATVGQLN 129 (466)
Q Consensus 54 vv~p~~~~dV~~~v~~a~~~~~~~~vr~gGh~~~g~-s~~~~~~~~~idl~~---l~~v~~d~~~~~~~vg~G~~~~~v~ 129 (466)
.++|+|.+|+..+++. +. +..+.+||++.... -.......++||+++ |+.|+.+. ..++||+|+++.++.
T Consensus 180 y~~P~sl~ea~~ll~~---~~-~a~ilaGGT~L~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~--~~l~IGA~vtl~~l~ 253 (462)
T 2w3s_A 180 AFLPETSDALADWYLA---HP-EATLIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQIRETP--DGYGIGAGVTIAALR 253 (462)
T ss_dssp CBCCSSHHHHHHHHHH---CT-TCEEESSCTTTTHHHHTSCCCCCSEEECTTCGGGSCEEEET--TEEEEETTCBHHHHH
T ss_pred EEecCCHHHHHHHHhh---CC-CCEEEeCCchhhhhhhccCCCCCEEEEcCCChhhCcEEEcC--CEEEEccCCcHHHHH
Confidence 5789999998887753 22 56778999996432 001111368899998 67788753 469999999999999
Q ss_pred HHHH
Q 048047 130 YRIA 133 (466)
Q Consensus 130 ~~l~ 133 (466)
+.+.
T Consensus 254 ~~l~ 257 (462)
T 2w3s_A 254 AFAE 257 (462)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 8743
No 35
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=87.22 E-value=1 Score=46.71 Aligned_cols=30 Identities=17% Similarity=0.113 Sum_probs=23.1
Q ss_pred hhhhhccccH-HHHHHhhhccCCCCCcccCC
Q 048047 425 WGKKYFKNNF-YRLVHVKTMVDPENFFRNEQ 454 (466)
Q Consensus 425 ~~~~yyg~n~-~RL~~IK~kYDP~nvF~~~~ 454 (466)
|...+||++. +-+++||+.+||+|+|+--.
T Consensus 481 ~~~~~~g~~~~~lmr~IK~a~DP~~IlNPGk 511 (520)
T 1wvf_A 481 RVAQSYGPVKRKLEHAIKRAVDPNNILAPGR 511 (520)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCTTCCBCTTG
T ss_pred hhhhhcCHHHHHHHHHHHHHcCCCCCCCCCc
Confidence 4467777664 55599999999999998543
No 36
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=83.60 E-value=1.7 Score=42.11 Aligned_cols=76 Identities=20% Similarity=0.154 Sum_probs=52.2
Q ss_pred CCCEEEecCCHHHHHHHHHHHHhcCCcEEEeccccCCCCC-cccCCCCeEEEEcCCC---cceEEcCCCCEEEEcCCCcH
Q 048047 50 KPPFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGL-SSISDVPFIIVDLINF---SEISVNAEAKTAWVQSGATV 125 (466)
Q Consensus 50 ~p~~vv~p~~~~dV~~~v~~a~~~~~~~~vr~gGh~~~g~-s~~~~~~~~~idl~~l---~~v~~d~~~~~~~vg~G~~~ 125 (466)
.|--.++|+|.+|..++++ + -.-.+.+||++.... -........+||++++ +.|+.+.+ +.++||+++++
T Consensus 5 ~~f~y~~P~sl~ea~~ll~---~--~~a~~lAGGT~l~~~~k~~~~~p~~lIdi~~i~eL~~I~~~~~-~~l~IGA~vt~ 78 (324)
T 1rm6_B 5 TDFRTHRPATLADAVNALA---A--EATLPLGAGTDLLPNLRRGLGHPAALVDLTGIDGLATISTLAD-GSLRIGAGATL 78 (324)
T ss_dssp CCCEEECCSSHHHHHHHTT---S--TTEEEESSCTTHHHHHHTTSCCCSEEEECTTSTTTTCEEECTT-SCEEEETTCBH
T ss_pred CceEEEccCCHHHHHHHHh---C--CCCEEEECchhHHHHHhccCCCCCEEEECCCChhhcceEECCC-CeEEEccCCcH
Confidence 3446889999999887765 2 246778899985211 0110113688999987 56776543 36999999999
Q ss_pred HHHHHH
Q 048047 126 GQLNYR 131 (466)
Q Consensus 126 ~~v~~~ 131 (466)
.++.+.
T Consensus 79 ~~l~~~ 84 (324)
T 1rm6_B 79 EAIAEH 84 (324)
T ss_dssp HHHHHC
T ss_pred HHHHhC
Confidence 999764
No 37
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=80.61 E-value=3.1 Score=44.38 Aligned_cols=29 Identities=41% Similarity=0.576 Sum_probs=23.5
Q ss_pred hhhhhhcc-ccHHHHHHhhhccCCCCCccc
Q 048047 424 VWGKKYFK-NNFYRLVHVKTMVDPENFFRN 452 (466)
Q Consensus 424 ~~~~~yyg-~n~~RL~~IK~kYDP~nvF~~ 452 (466)
.|-..+|+ +.++.|++||+.+||+|+|+-
T Consensus 625 ~~l~~~~g~~~l~lmr~IK~a~DP~gILNP 654 (658)
T 4bby_A 625 QWLKESISDVGFGMLKSVKDYVDPTNIFGN 654 (658)
T ss_dssp GGHHHHHCHHHHHHHHHHHHHHSTTCSSCS
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCcccCCCC
Confidence 35555665 479999999999999999973
No 38
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=60.14 E-value=7.9 Score=40.28 Aligned_cols=25 Identities=20% Similarity=0.117 Sum_probs=20.3
Q ss_pred ccHHHHHHhhhccCCCCCcccCCCC
Q 048047 432 NNFYRLVHVKTMVDPENFFRNEQSI 456 (466)
Q Consensus 432 ~n~~RL~~IK~kYDP~nvF~~~~~I 456 (466)
+.++-+++||+.+||+|+|+--.-+
T Consensus 523 ~~~~lm~~iK~~~DP~gILNPGk~~ 547 (560)
T 1e8g_A 523 SFLRFNEVLKNAVDPNGIIAPGKSG 547 (560)
T ss_dssp HHHHHHHHHHHHHCTTCCBCTTGGG
T ss_pred HHHHHHHHHHHHcCccCCCCCCccc
Confidence 4688899999999999999854333
No 39
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=58.51 E-value=8.4 Score=44.41 Aligned_cols=79 Identities=6% Similarity=0.015 Sum_probs=52.6
Q ss_pred CCCEEEecCCHHHHHHHHHHHHhcCCcEEEeccccCCCCCc-ccCCCCeEEEEcCCC---cceEEcCCCCEEEEcCCCcH
Q 048047 50 KPPFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGLS-SISDVPFIIVDLINF---SEISVNAEAKTAWVQSGATV 125 (466)
Q Consensus 50 ~p~~vv~p~~~~dV~~~v~~a~~~~~~~~vr~gGh~~~g~s-~~~~~~~~~idl~~l---~~v~~d~~~~~~~vg~G~~~ 125 (466)
.+.-.++|+|.+|+.++++ ++ -.-.+.+||++....- ........+||++++ +.|+.+ ...++||+++++
T Consensus 232 ~~~~~~~P~sl~ea~~ll~---~~-~~a~lvaGgT~l~~~~k~~~~~~~~lIdl~~i~EL~~I~~~--~~~l~IGA~vtl 305 (1332)
T 3unc_A 232 ERVTWIQASTLKELLDLKA---QH-PEAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHG--PEGISFGAACAL 305 (1332)
T ss_dssp SSCEEEECCSHHHHHHHHH---HC-TTCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEEC--SSEEEEETTCBH
T ss_pred CceEEEccCCHHHHHHHHh---hC-CCCEEEEeCcHHHHHhhcCCCCCCeEEEcCCCHHhCceEEe--CCEEEEEecChH
Confidence 3456899999999877653 32 1245668998842110 001112578999985 456664 457999999999
Q ss_pred HHHHHHHHH
Q 048047 126 GQLNYRIAE 134 (466)
Q Consensus 126 ~~v~~~l~~ 134 (466)
.++.+.+.+
T Consensus 306 ~~l~~~l~~ 314 (1332)
T 3unc_A 306 SSVEKTLLE 314 (1332)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999887643
No 40
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=50.15 E-value=5.9 Score=41.30 Aligned_cols=22 Identities=23% Similarity=0.345 Sum_probs=20.6
Q ss_pred ccHHHHHHhhhccCCCCCcccC
Q 048047 432 NNFYRLVHVKTMVDPENFFRNE 453 (466)
Q Consensus 432 ~n~~RL~~IK~kYDP~nvF~~~ 453 (466)
.++++.+++++++||+++|.+.
T Consensus 533 p~~~~f~~~r~~~DP~g~F~n~ 554 (561)
T 2i0k_A 533 ENWDTARARYNQIDPHRVFTNG 554 (561)
T ss_dssp SSHHHHHHHHHHHCTTCCSCCH
T ss_pred CCHHHHHHHHHhcCCCCccCCH
Confidence 7999999999999999999865
No 41
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=48.88 E-value=6.9 Score=39.88 Aligned_cols=29 Identities=10% Similarity=0.102 Sum_probs=24.1
Q ss_pred hhhhhhhcc-ccHHHHHHhhhccCCCCCcc
Q 048047 423 GVWGKKYFK-NNFYRLVHVKTMVDPENFFR 451 (466)
Q Consensus 423 ~~~~~~yyg-~n~~RL~~IK~kYDP~nvF~ 451 (466)
..|-...+| +.++-+++||+.+||+|+++
T Consensus 442 ~~~l~~~~~~~~~~~m~~iK~~~DP~~ilN 471 (476)
T 3pm9_A 442 RDELAEVKDKTAIELMRSIKALLDPHGIMN 471 (476)
T ss_dssp HHHHHHHSCHHHHHHHHHHHHHHCTTSCBS
T ss_pred HHHHHHhcCHHHHHHHHHHHHHhCcccCCC
Confidence 356566666 57999999999999999997
No 42
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=40.84 E-value=14 Score=38.53 Aligned_cols=28 Identities=18% Similarity=0.001 Sum_probs=21.3
Q ss_pred cccHHHHHHhhhccCCCCCcccCCCCCCc
Q 048047 431 KNNFYRLVHVKTMVDPENFFRNEQSIPPF 459 (466)
Q Consensus 431 g~n~~RL~~IK~kYDP~nvF~~~~~I~~~ 459 (466)
++... |++||+.+||.|+|+--.-+.|.
T Consensus 536 ~~~~~-m~~iK~~~DP~~ilNPGk~~t~~ 563 (571)
T 1f0x_A 536 KAPET-LQKFYRENDPTNSMNPGIGKTSK 563 (571)
T ss_dssp CCCHH-HHHHHHHHCTTCCBSTTTTTCCC
T ss_pred CCHHH-HHHHHHHhCCCCCCCCCcCcCCc
Confidence 44444 99999999999999876555543
No 43
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=37.17 E-value=13 Score=38.42 Aligned_cols=23 Identities=17% Similarity=0.226 Sum_probs=21.2
Q ss_pred cccHHHHHHhhhccCCCCCcccC
Q 048047 431 KNNFYRLVHVKTMVDPENFFRNE 453 (466)
Q Consensus 431 g~n~~RL~~IK~kYDP~nvF~~~ 453 (466)
|+|+..-+++++++||+++|.+.
T Consensus 511 ~~~~~~~~~~~~~~DP~~~F~n~ 533 (540)
T 3js8_A 511 AANWDAAKAALAAYDPYRLFSSP 533 (540)
T ss_dssp GGSHHHHHHHHHHHCTTCCSCCH
T ss_pred CCCHHHHHHHHHhcCCCcccCCH
Confidence 58999999999999999999864
No 44
>3p04_A Uncharacterized BCR; SEPF homolog, DUF552, PSI-biology, NESG, structural genomics structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=32.28 E-value=46 Score=25.23 Aligned_cols=35 Identities=9% Similarity=0.066 Sum_probs=28.2
Q ss_pred CCEEEecCCHHHHHHHHHHHHhcCCcEEEeccccCCCCCcccCCCCeEEEEcCCCcc
Q 048047 51 PPFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEGLSSISDVPFIIVDLINFSE 107 (466)
Q Consensus 51 p~~vv~p~~~~dV~~~v~~a~~~~~~~~vr~gGh~~~g~s~~~~~~~~~idl~~l~~ 107 (466)
-..++.|++-+|++.++...++.. .++|||+.|+.
T Consensus 6 ~Ivv~~P~sy~Da~~I~d~Lr~~~----------------------~VvvNL~~ld~ 40 (87)
T 3p04_A 6 TIVPVELHSFEDAQVIGGAFRDGD----------------------AVVFDMSLLSR 40 (87)
T ss_dssp SCEEEECSSGGGHHHHHHHHHTTC----------------------CEEEECTTSCH
T ss_pred EEEEEecCcHHHHHHHHHHHHCCC----------------------EEEEECCCCCH
Confidence 348999999999999998777633 58889888864
No 45
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=28.44 E-value=39 Score=39.03 Aligned_cols=76 Identities=16% Similarity=0.207 Sum_probs=48.9
Q ss_pred EEEecCCHHHHHHHHHHHHhcCCcEEEeccccCC--C-CCcccCCCCeEEEEcCCCcce-EEcCCCCEEEEcCCCcHHHH
Q 048047 53 FIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDL--E-GLSSISDVPFIIVDLINFSEI-SVNAEAKTAWVQSGATVGQL 128 (466)
Q Consensus 53 ~vv~p~~~~dV~~~v~~a~~~~~~~~vr~gGh~~--~-g~s~~~~~~~~~idl~~l~~v-~~d~~~~~~~vg~G~~~~~v 128 (466)
..++|.|.+|+.++.. +.-+.+++ .|+++. . -.-... -.++||+.+..++ .+..+...++||+++++.++
T Consensus 242 ~w~~P~tl~el~~l~~--~~p~a~lv--aGnT~~gl~~~~~~~~--~~~~I~~~~v~EL~~i~~~~~~l~IGA~vtls~~ 315 (1335)
T 3zyv_A 242 TWIAPGTLNDLLELKM--KHPSAPLV--IGNTYLGLHMKFTDVS--YPIIISPARILELFVVTNTKQGLTLGTGLSLTQV 315 (1335)
T ss_dssp EEEECSSHHHHHHHHH--HCTTSCBC--SSCTTHHHHHC--CCC--CSEEECCTTCGGGSCEECCTTEEEEETTCBHHHH
T ss_pred eEecCCCHHHHHHHHH--HCCCCeEE--EecccceeeEeecCCC--CCeEEEcCcchhHheEEecCCEEEEcccCcHHHH
Confidence 4679999999887632 22344544 455542 1 111111 2588999986654 24455568999999999999
Q ss_pred HHHHHH
Q 048047 129 NYRIAE 134 (466)
Q Consensus 129 ~~~l~~ 134 (466)
.+.|.+
T Consensus 316 ~~~l~~ 321 (1335)
T 3zyv_A 316 KNVLSD 321 (1335)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887765
No 46
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=28.26 E-value=20 Score=37.48 Aligned_cols=28 Identities=18% Similarity=0.406 Sum_probs=18.8
Q ss_pred hhhhhcc-ccHHHHHHhhhccCCCCCccc
Q 048047 425 WGKKYFK-NNFYRLVHVKTMVDPENFFRN 452 (466)
Q Consensus 425 ~~~~yyg-~n~~RL~~IK~kYDP~nvF~~ 452 (466)
|-...+| +.++=+++||+.+||+|+|+-
T Consensus 552 ~l~~~~g~~~~~lmr~iK~a~DP~gIlNP 580 (584)
T 2uuu_A 552 WMTRYATRGWINVYRSLKETIDPKDICNP 580 (584)
T ss_dssp -------CTHHHHHHHHHHHHCTTCCBSC
T ss_pred HHHHhcCHHHHHHHHHHHHHcCCCcCCCC
Confidence 3334444 468999999999999999973
No 47
>1wn2_A Peptidyl-tRNA hydrolase; riken structural genomics/proteomics initiative, structural genomics; 1.20A {Pyrococcus horikoshii} PDB: 2d3k_A
Probab=27.74 E-value=84 Score=25.26 Aligned_cols=42 Identities=14% Similarity=0.150 Sum_probs=34.6
Q ss_pred ccCCCCCCCCCEEEecCCHHHHHHHHHHHHhcCCcE-EEeccccC
Q 048047 42 VFSTPTNQKPPFIITPFHVSEIQAAIKCSKKSGLQI-RVRSGGHD 85 (466)
Q Consensus 42 r~~~~~~~~p~~vv~p~~~~dV~~~v~~a~~~~~~~-~vr~gGh~ 85 (466)
+|.. ...|..|+++.++++...+.+-|++.|++. .+|-.||.
T Consensus 49 ~W~~--~g~~Kvvlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~T 91 (121)
T 1wn2_A 49 AWFR--EGQKKVVVKVESEEELFKLKAEAEKLGLPNALIRDAGLT 91 (121)
T ss_dssp HHHH--TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECTTCT
T ss_pred HHHH--CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCcc
Confidence 4643 347889999999999999999999999997 56777774
No 48
>2lju_A Putative oxidoreductase; structural genomics, seattle structural GENO center for infectious disease, ssgcid; NMR {Ehrlichia chaffeensis}
Probab=27.64 E-value=60 Score=25.66 Aligned_cols=37 Identities=11% Similarity=0.083 Sum_probs=27.5
Q ss_pred cCCCCCCCCCEEEecCCHHHHHHHHHHHHhcCCcEEEecc
Q 048047 43 FSTPTNQKPPFIITPFHVSEIQAAIKCSKKSGLQIRVRSG 82 (466)
Q Consensus 43 ~~~~~~~~p~~vv~p~~~~dV~~~v~~a~~~~~~~~vr~g 82 (466)
|+.+.++.-...+.=.|.|| ||.||.++|++..|.--
T Consensus 52 WtsS~D~~~qv~L~F~skE~---AiayAek~G~~y~V~ep 88 (108)
T 2lju_A 52 WTGSHDTKQQVCLSFTTREL---AIAYAVAHKIDYTVLQD 88 (108)
T ss_dssp CSSSCCCCCCSCEEESSHHH---HHHHHHHTTCEEEEECS
T ss_pred ccCCCCccccceEecCCHHH---HHHHHHHcCCEEEEecC
Confidence 55555555555666667776 89999999999999754
No 49
>1xty_A PTH, peptidyl-tRNA hydrolase; mixed beta sheet; 1.80A {Pyrococcus abyssi}
Probab=26.02 E-value=87 Score=25.11 Aligned_cols=42 Identities=17% Similarity=0.273 Sum_probs=35.0
Q ss_pred ccCCCCCCCCCEEEecCCHHHHHHHHHHHHhcCCcE-EEeccccC
Q 048047 42 VFSTPTNQKPPFIITPFHVSEIQAAIKCSKKSGLQI-RVRSGGHD 85 (466)
Q Consensus 42 r~~~~~~~~p~~vv~p~~~~dV~~~v~~a~~~~~~~-~vr~gGh~ 85 (466)
+|.. ...|..|+++.++++...+.+-|++.|++. .++-.||.
T Consensus 48 ~W~~--~g~~KiVlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~T 90 (120)
T 1xty_A 48 EWLH--QGQPKIIVKVNSLDEIISRAKKAETMNLPFSIIEDAGKT 90 (120)
T ss_dssp HHHH--TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCSSS
T ss_pred HHHH--CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCcc
Confidence 5753 347999999999999999999999999997 56777774
No 50
>1rlk_A Hypothetical protein TA0108; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; HET: SO4; 1.95A {Thermoplasma acidophilum} SCOP: c.131.1.1
Probab=23.89 E-value=92 Score=24.85 Aligned_cols=42 Identities=12% Similarity=0.177 Sum_probs=34.5
Q ss_pred ccCCCCCCCCCEEEecCCHHHHHHHHHHHHhcCCcE-EEeccccC
Q 048047 42 VFSTPTNQKPPFIITPFHVSEIQAAIKCSKKSGLQI-RVRSGGHD 85 (466)
Q Consensus 42 r~~~~~~~~p~~vv~p~~~~dV~~~v~~a~~~~~~~-~vr~gGh~ 85 (466)
+|. ....|..|+++.++++...+.+-|++.|++. .++-.|+.
T Consensus 45 ~W~--~~g~~kiVlk~~~e~~l~~l~~~a~~~gl~~~~v~DAG~T 87 (117)
T 1rlk_A 45 EWY--DEGQRKIVVKVNDLDEIMEIKRMADSMGIVNEIVQDRGYT 87 (117)
T ss_dssp HHH--HTTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEECCCSS
T ss_pred HHH--HCCCeEEEEecCCHHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence 464 2457999999999999999999999999997 55667765
No 51
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=23.54 E-value=74 Score=23.51 Aligned_cols=33 Identities=27% Similarity=0.354 Sum_probs=28.7
Q ss_pred EEEecCCHHHHHHHHHHHHhcCCcEEEeccccC
Q 048047 53 FIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHD 85 (466)
Q Consensus 53 ~vv~p~~~~dV~~~v~~a~~~~~~~~vr~gGh~ 85 (466)
+|-.++|.+||..+|+-.+.+|-|+++--.|-+
T Consensus 30 yirtatssqdirdiiksmkdngkplvvfvngas 62 (112)
T 2lnd_A 30 YIRTATSSQDIRDIIKSMKDNGKPLVVFVNGAS 62 (112)
T ss_dssp TEEEECSHHHHHHHHHHHTTCCSCEEEEECSCC
T ss_pred eeeeccchhhHHHHHHHHHhcCCeEEEEecCcc
Confidence 677889999999999999999999998766544
No 52
>2zv3_A PTH, peptidyl-tRNA hydrolase; cytoplasm, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii}
Probab=23.23 E-value=98 Score=24.60 Aligned_cols=42 Identities=14% Similarity=0.257 Sum_probs=32.8
Q ss_pred ccCCCCCCCCCEEEecCCHHHHHHHHHHHHhcCCcE-EEeccccC
Q 048047 42 VFSTPTNQKPPFIITPFHVSEIQAAIKCSKKSGLQI-RVRSGGHD 85 (466)
Q Consensus 42 r~~~~~~~~p~~vv~p~~~~dV~~~v~~a~~~~~~~-~vr~gGh~ 85 (466)
+|.. ...|..|+++.++++...+.+-|++.|++. .++-.|+.
T Consensus 43 ~W~~--~g~~kivlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~T 85 (115)
T 2zv3_A 43 EWLR--EGQKKVVVKVNSEKELIDIYNKARSEGLPCSIIRDAGHT 85 (115)
T ss_dssp HHHH--TTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEEECC--
T ss_pred HHHH--CCCeEEEEecCCHHHHHHHHHHHHHcCCCEEEEEeCCce
Confidence 4642 457899999999999999999999999986 45666654
No 53
>2jya_A AGR_C_3324P, uncharacterized protein ATU1810; protein with unknown function ATU1810, ontario centre for ST proteomics, OCSP; NMR {Agrobacterium tumefaciens str}
Probab=22.64 E-value=64 Score=25.42 Aligned_cols=36 Identities=17% Similarity=0.260 Sum_probs=27.7
Q ss_pred cCCCCCCCCCEEEecCCHHHHHHHHHHHHhcCCcEEEec
Q 048047 43 FSTPTNQKPPFIITPFHVSEIQAAIKCSKKSGLQIRVRS 81 (466)
Q Consensus 43 ~~~~~~~~p~~vv~p~~~~dV~~~v~~a~~~~~~~~vr~ 81 (466)
|+.+.++.-...+.=.|.|| ||.||.++|++..|.-
T Consensus 44 WtsS~D~~~qv~L~F~skE~---AiayAek~G~~y~V~e 79 (106)
T 2jya_A 44 YTSSSDMKQQVKLTFETQEQ---AEAYAQRKGIEYRVIL 79 (106)
T ss_dssp SCSCCCSEEEEEEEESSHHH---HHHHHHHHTCEEEECC
T ss_pred cCCCCCccccceEecCCHHH---HHHHHHHcCCEEEEeC
Confidence 66655555556666677777 8999999999999875
No 54
>1rzw_A Protein AF2095(GR4); beta-sheet of 4 parallel, anti-parallel beta-strands and 3 alpha-helices, structural genomics, PSI; NMR {Archaeoglobus fulgidus} SCOP: c.131.1.1 PDB: 3erj_A
Probab=21.95 E-value=1.2e+02 Score=24.59 Aligned_cols=42 Identities=12% Similarity=0.162 Sum_probs=34.5
Q ss_pred ccCCCCCCCCCEEEecCCHHHHHHHHHHHHhcCCcE-EEeccccC
Q 048047 42 VFSTPTNQKPPFIITPFHVSEIQAAIKCSKKSGLQI-RVRSGGHD 85 (466)
Q Consensus 42 r~~~~~~~~p~~vv~p~~~~dV~~~v~~a~~~~~~~-~vr~gGh~ 85 (466)
+|.. ...+..|+++.++++...+.+-|++.|++. .||-.|+.
T Consensus 42 ~W~~--~G~~Kvvlk~~~e~el~~L~~~a~~~gl~~~~I~DAG~T 84 (123)
T 1rzw_A 42 KWLD--EGQKKVVLKVKSLEELLGIKHKAESLGLVTGLVQDAGLT 84 (123)
T ss_dssp HTGG--GCSSEEEEECSCHHHHHHHHHHHHHTTCCEEEECCTTCC
T ss_pred HHHH--CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEECCCCc
Confidence 4633 236889999999999999999999999996 66777775
No 55
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=21.67 E-value=57 Score=31.76 Aligned_cols=30 Identities=13% Similarity=0.159 Sum_probs=25.2
Q ss_pred cCCHHHHHHHHHHHHhcCCcEEE--eccccCC
Q 048047 57 PFHVSEIQAAIKCSKKSGLQIRV--RSGGHDL 86 (466)
Q Consensus 57 p~~~~dV~~~v~~a~~~~~~~~v--r~gGh~~ 86 (466)
.-|.+||..+|++|++++|.|.+ -.-||+-
T Consensus 91 ~YT~~di~eiv~YA~~rgI~VIPEID~PGH~~ 122 (367)
T 1yht_A 91 FLSYRQLDDIKAYAKAKGIELIPELDSPNHMT 122 (367)
T ss_dssp EBCHHHHHHHHHHHHHTTCEEEEEEEESSSCH
T ss_pred CcCHHHHHHHHHHHHHcCCEEEEeccchHHHH
Confidence 35899999999999999999986 4567763
No 56
>1q7s_A BIT1, protein CGI-147; apoptosis; 2.00A {Homo sapiens} SCOP: c.131.1.1
Probab=20.35 E-value=1.3e+02 Score=23.89 Aligned_cols=41 Identities=15% Similarity=0.293 Sum_probs=33.4
Q ss_pred ccCCCCCCCCCEEEecCCHHHHHHHHHHHHhcCCcE-EEecccc
Q 048047 42 VFSTPTNQKPPFIITPFHVSEIQAAIKCSKKSGLQI-RVRSGGH 84 (466)
Q Consensus 42 r~~~~~~~~p~~vv~p~~~~dV~~~v~~a~~~~~~~-~vr~gGh 84 (466)
+|.. ...|..|++..++++...+.+-|++.|++. .++=.||
T Consensus 45 ~W~~--~g~~KVvlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~ 86 (117)
T 1q7s_A 45 QWEY--CGQPKVVVKAPDEETLIALLAHAKMLGLTVSLIQDAGR 86 (117)
T ss_dssp HHHH--TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred HHHh--CCCeeEEEEcCCHHHHHHHHHHHHHCCCCEEEEEECCC
Confidence 4654 346889999999999999999999999985 5566666
No 57
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=20.25 E-value=1.4e+02 Score=25.22 Aligned_cols=37 Identities=19% Similarity=0.362 Sum_probs=31.5
Q ss_pred CEEEecCCHHHHHHHHHHHHhcCCcEEEeccccCCCC
Q 048047 52 PFIITPFHVSEIQAAIKCSKKSGLQIRVRSGGHDLEG 88 (466)
Q Consensus 52 ~~vv~p~~~~dV~~~v~~a~~~~~~~~vr~gGh~~~g 88 (466)
...+.|.+.+++.++|+-+.+.+..+.+-+||.+...
T Consensus 47 ~~~iv~Dd~~~I~~~l~~a~~~~~DlVittGG~g~~~ 83 (167)
T 2g2c_A 47 SEVVVPEGYDTVVEAIATALKQGARFIITAGGTGIRA 83 (167)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTTCSEEEEESCCSSST
T ss_pred EEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 3578899999999999988876688999999988654
Done!