BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048050
(77 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FYB5|DNJ11_ARATH Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana
GN=ATJ11 PE=1 SV=2
Length = 161
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 7/43 (16%)
Query: 12 LYEVYHPDFSGNSR-------DFIEIHNSYETLSDPTARAIYD 47
L + HPD +G R +F++IH +Y TLSDP R++YD
Sbjct: 88 LARICHPDVAGTDRTSSSSADEFMKIHAAYCTLSDPEKRSVYD 130
>sp|P43644|DNJH_ATRNU DnaJ protein homolog ANJ1 OS=Atriplex nummularia PE=2 SV=1
Length = 417
Score = 40.0 bits (92), Expect = 0.005, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 17 HPDFSGNSRDFIEIHNSYETLSDPTARAIYD 47
HPD G+ F E+ ++YE LSDP R IYD
Sbjct: 41 HPDKGGDPEKFKELAHAYEVLSDPEKREIYD 71
>sp|Q04960|DNJH_CUCSA DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 PE=2 SV=1
Length = 413
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 19/31 (61%)
Query: 17 HPDFSGNSRDFIEIHNSYETLSDPTARAIYD 47
HPD G+ F E+ +YE LSDP R IYD
Sbjct: 40 HPDKGGDPEKFKELAQAYEVLSDPEKREIYD 70
>sp|Q94AW8|DNAJ3_ARATH Chaperone protein dnaJ 3 OS=Arabidopsis thaliana GN=ATJ3 PE=1
SV=2
Length = 420
Score = 39.3 bits (90), Expect = 0.007, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 19/31 (61%)
Query: 17 HPDFSGNSRDFIEIHNSYETLSDPTARAIYD 47
HPD G+ F E+ +YE LSDP R IYD
Sbjct: 42 HPDKGGDPEKFKELAQAYEVLSDPEKREIYD 72
>sp|P42825|DNAJ2_ARATH Chaperone protein dnaJ 2 OS=Arabidopsis thaliana GN=ATJ2 PE=1
SV=2
Length = 419
Score = 39.3 bits (90), Expect = 0.007, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 19/31 (61%)
Query: 17 HPDFSGNSRDFIEIHNSYETLSDPTARAIYD 47
HPD G+ F E+ +YE LSDP R IYD
Sbjct: 42 HPDKGGDPEKFKELAQAYEVLSDPEKREIYD 72
>sp|P42824|DNJH2_ALLPO DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE=2 SV=1
Length = 418
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 19/31 (61%)
Query: 17 HPDFSGNSRDFIEIHNSYETLSDPTARAIYD 47
HPD G+ F EI +YE L+DP R IYD
Sbjct: 41 HPDKGGDPEKFKEIGQAYEVLNDPEKREIYD 71
>sp|Q8DKR7|DNAJ_THEEB Chaperone protein DnaJ OS=Thermosynechococcus elongatus (strain
BP-1) GN=dnaJ PE=3 SV=2
Length = 373
Score = 38.9 bits (89), Expect = 0.010, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Query: 16 YHPDFS---GNSRDFIEIHNSYETLSDPTARAIYD 47
YHPD + G F EI+ +YE LSDP ARA YD
Sbjct: 31 YHPDVNKEPGAEEKFKEINRAYEVLSDPQARANYD 65
>sp|Q2NL21|DJC11_BOVIN DnaJ homolog subfamily C member 11 OS=Bos taurus GN=DNAJC11 PE=2
SV=1
Length = 559
Score = 38.9 bits (89), Expect = 0.011, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 23/41 (56%), Gaps = 7/41 (17%)
Query: 15 VYHPDF-------SGNSRDFIEIHNSYETLSDPTARAIYDI 48
+YHPD S R F +H +YE LSDP RAIYDI
Sbjct: 40 LYHPDKHRDPELKSQAERLFNLVHQAYEVLSDPQTRAIYDI 80
>sp|Q9SDN0|DNJ20_ARATH Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana
GN=ATJ20 PE=2 SV=2
Length = 197
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
Query: 8 AGGSLYEVYHPDFSGNSR------DFIEIHNSYETLSDPTARAIYDISL 50
A L YHPD S R FI + +YETLSDP R +YD L
Sbjct: 85 AYKQLARKYHPDVSPPDRVEEYTDRFIRVQEAYETLSDPRRRVLYDRDL 133
>sp|Q5U458|DJC11_MOUSE DnaJ homolog subfamily C member 11 OS=Mus musculus GN=Dnajc11
PE=2 SV=2
Length = 559
Score = 38.5 bits (88), Expect = 0.012, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 23/41 (56%), Gaps = 7/41 (17%)
Query: 15 VYHPDF-------SGNSRDFIEIHNSYETLSDPTARAIYDI 48
+YHPD S R F +H +YE LSDP RAIYDI
Sbjct: 40 LYHPDKHRDPELKSQAERLFNLVHQAYEVLSDPQTRAIYDI 80
>sp|Q5RC70|DJC11_PONAB DnaJ homolog subfamily C member 11 OS=Pongo abelii GN=DNAJC11
PE=2 SV=1
Length = 559
Score = 38.5 bits (88), Expect = 0.012, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 23/41 (56%), Gaps = 7/41 (17%)
Query: 15 VYHPDF-------SGNSRDFIEIHNSYETLSDPTARAIYDI 48
+YHPD S R F +H +YE LSDP RAIYDI
Sbjct: 40 LYHPDKHRDPELKSQAERLFNLVHQAYEVLSDPQTRAIYDI 80
>sp|Q9NVH1|DJC11_HUMAN DnaJ homolog subfamily C member 11 OS=Homo sapiens GN=DNAJC11
PE=1 SV=2
Length = 559
Score = 38.5 bits (88), Expect = 0.012, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 23/41 (56%), Gaps = 7/41 (17%)
Query: 15 VYHPDF-------SGNSRDFIEIHNSYETLSDPTARAIYDI 48
+YHPD S R F +H +YE LSDP RAIYDI
Sbjct: 40 LYHPDKHRDPELKSQAERLFNLVHQAYEVLSDPQTRAIYDI 80
>sp|A6WX07|DNAJ_OCHA4 Chaperone protein DnaJ OS=Ochrobactrum anthropi (strain ATCC
49188 / DSM 6882 / NCTC 12168) GN=dnaJ PE=3 SV=1
Length = 377
Score = 38.5 bits (88), Expect = 0.013, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 22/36 (61%), Gaps = 4/36 (11%)
Query: 16 YHPDFSGNS----RDFIEIHNSYETLSDPTARAIYD 47
YHPD + N+ R F EI +YETL DP RA YD
Sbjct: 31 YHPDRNPNNPEAERKFKEIGEAYETLKDPQKRAAYD 66
>sp|Q93S23|DNAJ_RHITR Chaperone protein DnaJ (Fragment) OS=Rhizobium tropici GN=dnaJ
PE=3 SV=1
Length = 331
Score = 38.1 bits (87), Expect = 0.015, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 20/31 (64%)
Query: 17 HPDFSGNSRDFIEIHNSYETLSDPTARAIYD 47
+PD S R F EI+ +YETL DP RA YD
Sbjct: 15 NPDDSNAERKFKEINEAYETLKDPQKRAAYD 45
>sp|Q03363|DNJH1_ALLPO DnaJ protein homolog 1 (Fragment) OS=Allium porrum GN=DNAJ1 PE=2
SV=1
Length = 397
Score = 38.1 bits (87), Expect = 0.017, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 17 HPDFSGNSRDFIEIHNSYETLSDPTARAIYD 47
HPD G+ F E+ +Y+ LSDP R IYD
Sbjct: 20 HPDKGGDPEKFKELAQAYDVLSDPEKREIYD 50
>sp|B4F2V6|DNAJ_PROMH Chaperone protein DnaJ OS=Proteus mirabilis (strain HI4320)
GN=dnaJ PE=3 SV=1
Length = 378
Score = 37.7 bits (86), Expect = 0.022, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Query: 16 YHPDFSGNSRD----FIEIHNSYETLSDPTARAIYD 47
YHPD + +D F EI +YE LSDP RA YD
Sbjct: 32 YHPDRNQGDKDSESKFKEIKEAYEVLSDPQKRAAYD 67
>sp|Q6RSN5|DNAJ_RHIRD Chaperone protein DnaJ OS=Rhizobium radiobacter GN=dnaJ PE=1 SV=1
Length = 379
Score = 37.7 bits (86), Expect = 0.023, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 17 HPDFSGNSRDFIEIHNSYETLSDPTARAIYD 47
+PD + + R F EI+ +YETL DP RA YD
Sbjct: 37 NPDDADSERKFKEINEAYETLKDPQKRAAYD 67
>sp|P50018|DNAJ_AGRT5 Chaperone protein DnaJ OS=Agrobacterium tumefaciens (strain C58 /
ATCC 33970) GN=dnaJ PE=2 SV=2
Length = 377
Score = 37.7 bits (86), Expect = 0.023, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 17 HPDFSGNSRDFIEIHNSYETLSDPTARAIYD 47
+PD + + R F EI+ +YETL DP RA YD
Sbjct: 37 NPDDADSERKFKEINEAYETLKDPQKRAAYD 67
>sp|P0DJM1|DNAJ_LISMO Chaperone protein DnaJ OS=Listeria monocytogenes serovar 1/2a
(strain ATCC BAA-679 / EGD-e) GN=dnaJ PE=3 SV=1
Length = 377
Score = 37.4 bits (85), Expect = 0.025, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 12 LYEVYHPDF---SGNSRDFIEIHNSYETLSDPTARAIYD 47
L + YHPD +G F EI +YE LSDP RA YD
Sbjct: 28 LSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYD 66
>sp|B8DE39|DNAJ_LISMH Chaperone protein DnaJ OS=Listeria monocytogenes serotype 4a
(strain HCC23) GN=dnaJ PE=3 SV=1
Length = 376
Score = 37.4 bits (85), Expect = 0.025, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 12 LYEVYHPDF---SGNSRDFIEIHNSYETLSDPTARAIYD 47
L + YHPD +G F EI +YE LSDP RA YD
Sbjct: 28 LSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYD 66
>sp|G2K045|DNAJ_LISM4 Chaperone protein DnaJ OS=Listeria monocytogenes serotype 1/2a
(strain 10403S) GN=dnaJ PE=3 SV=1
Length = 377
Score = 37.4 bits (85), Expect = 0.025, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 12 LYEVYHPDF---SGNSRDFIEIHNSYETLSDPTARAIYD 47
L + YHPD +G F EI +YE LSDP RA YD
Sbjct: 28 LSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYD 66
>sp|Q92BN9|DNAJ_LISIN Chaperone protein DnaJ OS=Listeria innocua serovar 6a (strain
CLIP 11262) GN=dnaJ PE=3 SV=1
Length = 376
Score = 37.4 bits (85), Expect = 0.025, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 12 LYEVYHPDF---SGNSRDFIEIHNSYETLSDPTARAIYD 47
L + YHPD +G F EI +YE LSDP RA YD
Sbjct: 28 LSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYD 66
>sp|Q71ZJ8|DNAJ_LISMF Chaperone protein DnaJ OS=Listeria monocytogenes serotype 4b
(strain F2365) GN=dnaJ PE=3 SV=1
Length = 376
Score = 37.4 bits (85), Expect = 0.025, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 12 LYEVYHPDF---SGNSRDFIEIHNSYETLSDPTARAIYD 47
L + YHPD +G F EI +YE LSDP RA YD
Sbjct: 28 LSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYD 66
>sp|C1KVB9|DNAJ_LISMC Chaperone protein DnaJ OS=Listeria monocytogenes serotype 4b
(strain CLIP80459) GN=dnaJ PE=3 SV=1
Length = 376
Score = 37.4 bits (85), Expect = 0.025, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 12 LYEVYHPDF---SGNSRDFIEIHNSYETLSDPTARAIYD 47
L + YHPD +G F EI +YE LSDP RA YD
Sbjct: 28 LSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYD 66
>sp|Q8G6C6|DNAJ_BIFLO Chaperone protein DnaJ OS=Bifidobacterium longum (strain NCC
2705) GN=dnaJ PE=3 SV=1
Length = 381
Score = 37.4 bits (85), Expect = 0.026, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 16 YHPDFSGNSRD--FIEIHNSYETLSDPTARAIYDISLEEDENN 56
YHPD +G + F E++N+Y+ LS+P R +YD ++ + N
Sbjct: 30 YHPDIAGPEFEDKFKEVNNAYDVLSNPDKRRMYDSGVDPNNPN 72
>sp|P47248|DNAJL_MYCGE DnaJ-like protein MG002 OS=Mycoplasma genitalium (strain ATCC
33530 / G-37 / NCTC 10195) GN=MG002 PE=4 SV=1
Length = 310
Score = 37.4 bits (85), Expect = 0.030, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 12 LYEVYHPDFSG-NSRDFIEIHNSYETLSDPTARAIYDISLEEDE 54
L + YHPD + S+ F+EI+N+Y LSDP + YD L+ ++
Sbjct: 25 LAKRYHPDVNKLGSQTFVEINNAYSILSDPNQKEKYDSMLKVND 68
>sp|Q50312|DNAJL_MYCPN DnaJ-like protein MG002 homolog OS=Mycoplasma pneumoniae (strain
ATCC 29342 / M129) GN=MPN_002 PE=4 SV=1
Length = 309
Score = 37.0 bits (84), Expect = 0.032, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 12 LYEVYHPDFSGNSRD-FIEIHNSYETLSDPTARAIYDISLEEDE 54
L + YHPD + D F++I+N+Y LSD T +A YD L E
Sbjct: 25 LAKRYHPDINKQGADTFVKINNAYAVLSDTTQKAEYDAMLRFSE 68
>sp|Q5QXL2|DNAJ_IDILO Chaperone protein DnaJ OS=Idiomarina loihiensis (strain ATCC
BAA-735 / DSM 15497 / L2-TR) GN=dnaJ PE=3 SV=1
Length = 384
Score = 37.0 bits (84), Expect = 0.034, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Query: 16 YHPDFSGNSRD----FIEIHNSYETLSDPTARAIYD 47
YHPD + +D F EI +YE LSDP R +YD
Sbjct: 32 YHPDRTEGDKDMEIKFKEIKQAYEVLSDPQKRQMYD 67
>sp|B8HLD2|DNAJ_CYAP4 Chaperone protein DnaJ OS=Cyanothece sp. (strain PCC 7425 / ATCC
29141) GN=dnaJ PE=3 SV=1
Length = 374
Score = 37.0 bits (84), Expect = 0.034, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Query: 16 YHPDF---SGNSRDFIEIHNSYETLSDPTARAIYD 47
YHPD +G F EI+ +YE LSDP RA YD
Sbjct: 31 YHPDVNKEAGAEERFKEINRAYEVLSDPETRARYD 65
>sp|B3WEQ6|DNAJ_LACCB Chaperone protein DnaJ OS=Lactobacillus casei (strain BL23)
GN=dnaJ PE=3 SV=1
Length = 387
Score = 37.0 bits (84), Expect = 0.035, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Query: 12 LYEVYHPDFS---GNSRDFIEIHNSYETLSDPTARAIYD 47
L + YHPD + G + F +I+ +Y+ LSDP RA YD
Sbjct: 29 LSKKYHPDLNHAPGAEQKFKDINEAYQVLSDPQKRAAYD 67
>sp|Q038N5|DNAJ_LACC3 Chaperone protein DnaJ OS=Lactobacillus casei (strain ATCC 334)
GN=dnaJ PE=3 SV=1
Length = 387
Score = 37.0 bits (84), Expect = 0.035, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Query: 12 LYEVYHPDFS---GNSRDFIEIHNSYETLSDPTARAIYD 47
L + YHPD + G + F +I+ +Y+ LSDP RA YD
Sbjct: 29 LSKKYHPDLNHAPGAEQKFKDINEAYQVLSDPQKRAAYD 67
>sp|Q8RB67|DNAJ_THETN Chaperone protein DnaJ OS=Thermoanaerobacter tengcongensis
(strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
GN=dnaJ PE=3 SV=1
Length = 384
Score = 37.0 bits (84), Expect = 0.039, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Query: 12 LYEVYHPDFSGNSRD----FIEIHNSYETLSDPTARAIYD 47
L + YHPD + ++ F EI+ +YE LSDP RA YD
Sbjct: 28 LAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYD 67
>sp|B9JGW2|DNAJ_AGRRK Chaperone protein DnaJ OS=Agrobacterium radiobacter (strain K84 /
ATCC BAA-868) GN=dnaJ PE=3 SV=1
Length = 382
Score = 37.0 bits (84), Expect = 0.040, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 17 HPDFSGNSRDFIEIHNSYETLSDPTARAIYD 47
+PD + R F EI+ +YETL DP RA YD
Sbjct: 37 NPDDNDAERKFKEINEAYETLKDPNKRAAYD 67
>sp|P25303|SCJ1_YEAST DnaJ-related protein SCJ1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SCJ1 PE=1 SV=2
Length = 377
Score = 36.6 bits (83), Expect = 0.044, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Query: 12 LYEVYHPDFSGNSRD----FIEIHNSYETLSDPTARAIYD 47
L + YHPD + S + FIE+ +Y+ LSDP + IYD
Sbjct: 46 LSKKYHPDKNAGSEEAHQKFIEVGEAYDVLSDPEKKKIYD 85
>sp|B0CAZ0|DNAJ_ACAM1 Chaperone protein DnaJ OS=Acaryochloris marina (strain MBIC
11017) GN=dnaJ PE=3 SV=1
Length = 374
Score = 36.6 bits (83), Expect = 0.046, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Query: 16 YHPDFS---GNSRDFIEIHNSYETLSDPTARAIYD 47
YHPD + G F EI+ +YETLSDP R YD
Sbjct: 31 YHPDVNKEPGAEDKFKEINKAYETLSDPQMRGRYD 65
>sp|Q1MN12|DNAJ_RHIL3 Chaperone protein DnaJ OS=Rhizobium leguminosarum bv. viciae
(strain 3841) GN=dnaJ PE=3 SV=1
Length = 375
Score = 36.6 bits (83), Expect = 0.046, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 4/36 (11%)
Query: 16 YHPDFSGNSRD----FIEIHNSYETLSDPTARAIYD 47
YHPD + + +D F EI+ +YE L DP RA YD
Sbjct: 32 YHPDKNPDDKDAERKFKEINEAYEMLKDPQKRAAYD 67
>sp|B3PXH2|DNAJ_RHIE6 Chaperone protein DnaJ OS=Rhizobium etli (strain CIAT 652)
GN=dnaJ PE=3 SV=1
Length = 375
Score = 36.6 bits (83), Expect = 0.048, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 4/36 (11%)
Query: 16 YHPDFSGNSRD----FIEIHNSYETLSDPTARAIYD 47
YHPD + + +D F EI+ +YE L DP RA YD
Sbjct: 32 YHPDKNPDDKDAERKFKEINEAYEMLKDPQKRAAYD 67
>sp|Q05980|DNAJ_BRUO2 Chaperone protein DnaJ OS=Brucella ovis (strain ATCC 25840 /
63/290 / NCTC 10512) GN=dnaJ PE=2 SV=2
Length = 377
Score = 36.6 bits (83), Expect = 0.048, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Query: 16 YHPDFSGN----SRDFIEIHNSYETLSDPTARAIYD 47
YHPD + + R F EI +YETL DP RA YD
Sbjct: 31 YHPDRNPDDPEAERKFKEIGEAYETLKDPQKRAAYD 66
>sp|O94625|SPJ1_SCHPO DnaJ-related protein spj1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=spj1 PE=2 SV=2
Length = 381
Score = 36.6 bits (83), Expect = 0.050, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Query: 12 LYEVYHPDFS-GN---SRDFIEIHNSYETLSDPTARAIYDISLEEDEN 55
L + +HPD + GN FIEI+ ++E LSDP R IYD EE N
Sbjct: 30 LTKQWHPDKNPGNEEAQEKFIEINKAHEVLSDPEQRKIYDAYGEEGLN 77
>sp|Q8FXX1|DNAJ_BRUSU Chaperone protein DnaJ OS=Brucella suis biovar 1 (strain 1330)
GN=dnaJ PE=3 SV=1
Length = 377
Score = 36.6 bits (83), Expect = 0.050, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Query: 16 YHPDFSGN----SRDFIEIHNSYETLSDPTARAIYD 47
YHPD + + R F EI +YETL DP RA YD
Sbjct: 31 YHPDRNPDDPEAERKFKEIGEAYETLKDPQKRAAYD 66
>sp|B0CJX5|DNAJ_BRUSI Chaperone protein DnaJ OS=Brucella suis (strain ATCC 23445 / NCTC
10510) GN=dnaJ PE=3 SV=1
Length = 377
Score = 36.6 bits (83), Expect = 0.050, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Query: 16 YHPDFSGN----SRDFIEIHNSYETLSDPTARAIYD 47
YHPD + + R F EI +YETL DP RA YD
Sbjct: 31 YHPDRNPDDPEAERKFKEIGEAYETLKDPQKRAAYD 66
>sp|Q8YE77|DNAJ_BRUME Chaperone protein DnaJ OS=Brucella melitensis biotype 1 (strain
16M / ATCC 23456 / NCTC 10094) GN=dnaJ PE=3 SV=1
Length = 377
Score = 36.6 bits (83), Expect = 0.050, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Query: 16 YHPDFSGN----SRDFIEIHNSYETLSDPTARAIYD 47
YHPD + + R F EI +YETL DP RA YD
Sbjct: 31 YHPDRNPDDPEAERKFKEIGEAYETLKDPQKRAAYD 66
>sp|C0RG11|DNAJ_BRUMB Chaperone protein DnaJ OS=Brucella melitensis biotype 2 (strain
ATCC 23457) GN=dnaJ PE=3 SV=1
Length = 377
Score = 36.6 bits (83), Expect = 0.050, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Query: 16 YHPDFSGN----SRDFIEIHNSYETLSDPTARAIYD 47
YHPD + + R F EI +YETL DP RA YD
Sbjct: 31 YHPDRNPDDPEAERKFKEIGEAYETLKDPQKRAAYD 66
>sp|A9M9V9|DNAJ_BRUC2 Chaperone protein DnaJ OS=Brucella canis (strain ATCC 23365 /
NCTC 10854) GN=dnaJ PE=3 SV=1
Length = 377
Score = 36.6 bits (83), Expect = 0.050, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Query: 16 YHPDFSGN----SRDFIEIHNSYETLSDPTARAIYD 47
YHPD + + R F EI +YETL DP RA YD
Sbjct: 31 YHPDRNPDDPEAERKFKEIGEAYETLKDPQKRAAYD 66
>sp|Q57AD6|DNAJ_BRUAB Chaperone protein DnaJ OS=Brucella abortus biovar 1 (strain
9-941) GN=dnaJ PE=3 SV=1
Length = 377
Score = 36.6 bits (83), Expect = 0.050, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Query: 16 YHPDFSGN----SRDFIEIHNSYETLSDPTARAIYD 47
YHPD + + R F EI +YETL DP RA YD
Sbjct: 31 YHPDRNPDDPEAERKFKEIGEAYETLKDPQKRAAYD 66
>sp|Q2YQV1|DNAJ_BRUA2 Chaperone protein DnaJ OS=Brucella abortus (strain 2308) GN=dnaJ
PE=3 SV=1
Length = 377
Score = 36.6 bits (83), Expect = 0.050, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Query: 16 YHPDFSGN----SRDFIEIHNSYETLSDPTARAIYD 47
YHPD + + R F EI +YETL DP RA YD
Sbjct: 31 YHPDRNPDDPEAERKFKEIGEAYETLKDPQKRAAYD 66
>sp|B2S9C2|DNAJ_BRUA1 Chaperone protein DnaJ OS=Brucella abortus (strain S19) GN=dnaJ
PE=3 SV=1
Length = 377
Score = 36.6 bits (83), Expect = 0.050, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Query: 16 YHPDFSGN----SRDFIEIHNSYETLSDPTARAIYD 47
YHPD + + R F EI +YETL DP RA YD
Sbjct: 31 YHPDRNPDDPEAERKFKEIGEAYETLKDPQKRAAYD 66
>sp|A1KR91|DNAJ_NEIMF Chaperone protein DnaJ OS=Neisseria meningitidis serogroup C /
serotype 2a (strain ATCC 700532 / FAM18) GN=dnaJ PE=3
SV=1
Length = 373
Score = 36.6 bits (83), Expect = 0.052, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 4/36 (11%)
Query: 16 YHPDFSGNSRD----FIEIHNSYETLSDPTARAIYD 47
YHPD + ++++ F E+ +YETLSD RA+YD
Sbjct: 32 YHPDRNPDNKEAEEKFKEVQKAYETLSDKEKRAMYD 67
>sp|P63969|DNAJ_NEIMB Chaperone protein DnaJ OS=Neisseria meningitidis serogroup B
(strain MC58) GN=dnaJ PE=3 SV=1
Length = 373
Score = 36.6 bits (83), Expect = 0.052, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 4/36 (11%)
Query: 16 YHPDFSGNSRD----FIEIHNSYETLSDPTARAIYD 47
YHPD + ++++ F E+ +YETLSD RA+YD
Sbjct: 32 YHPDRNPDNKEAEEKFKEVQKAYETLSDKEKRAMYD 67
>sp|P63968|DNAJ_NEIMA Chaperone protein DnaJ OS=Neisseria meningitidis serogroup A /
serotype 4A (strain Z2491) GN=dnaJ PE=3 SV=1
Length = 373
Score = 36.6 bits (83), Expect = 0.052, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 4/36 (11%)
Query: 16 YHPDFSGNSRD----FIEIHNSYETLSDPTARAIYD 47
YHPD + ++++ F E+ +YETLSD RA+YD
Sbjct: 32 YHPDRNPDNKEAEEKFKEVQKAYETLSDKEKRAMYD 67
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,228,066
Number of Sequences: 539616
Number of extensions: 1049719
Number of successful extensions: 2870
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 335
Number of HSP's that attempted gapping in prelim test: 2760
Number of HSP's gapped (non-prelim): 445
length of query: 77
length of database: 191,569,459
effective HSP length: 48
effective length of query: 29
effective length of database: 165,667,891
effective search space: 4804368839
effective search space used: 4804368839
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)