IQD30 protein (Arabidopsis thaliana)

STRING 9.05

IQD30 protein (Arabidopsis thaliana) - STRING network view

This is the evidence view. Different line colors represent the types of evidence for the association.




confidence	evidence	actions	interactive	advanced	more	less	save

Your Input:
	IQD30	IQD30; calmodulin binding; IQD30; FUNCTIONS IN- calmodulin binding; INVOLVED IN- biological_process unknown; LOCATED IN- vacuole; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- IQ calmodulin-binding region (InterPro-IPR000048); BEST Arabidopsis thaliana protein match is- IQD31 (IQ-domain 31); calmodulin binding (TAIR-AT1G74690.1); Has 2925 Blast hits to 2231 proteins in 269 species- Archae - 4; Bacteria - 220; Metazoa - 845; Fungi - 205; Plants - 455; Viruses - 13; Other Eukaryotes - 1183 (source- NCBI BLink). (572 aa)
		(Arabidopsis thaliana)
Predicted Functional Partners:
	IQD12	IQD12 (IQ-domain 12); calmodulin binding; IQ-domain 12 (IQD12); FUNCTIONS IN- calmodulin bindin [...] (403 aa)		•		0.871
	iqd9	iqd9 (IQ-domain 9); calmodulin binding; IQ-domain 9 (iqd9); FUNCTIONS IN- calmodulin binding; I [...] (263 aa)		•		0.871
	AT1G23060	unknown protein; unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biolog [...] (367 aa)		•		0.788
	AT1G65010	unknown protein; unknown protein; LOCATED IN- chloroplast; EXPRESSED IN- 22 plant structures; E [...] (1345 aa)	•			0.651
	IQD31	IQD31 (IQ-domain 31); calmodulin binding; IQ-domain 31 (IQD31); FUNCTIONS IN- calmodulin bindin [...] (587 aa)	•	•	•	0.603
	AtGH9B7	AtGH9B7 (Arabidopsis thaliana glycosyl hydrolase 9B7); catalytic/ hydrolase, hydrolyzing O-glyc [...] (525 aa)	•			0.467
	IRK	leucine-rich repeat transmembrane protein kinase, putative; leucine-rich repeat transmembrane p [...] (964 aa)	•			0.411
	AT5G64030	dehydration-responsive protein-related; dehydration-responsive protein-related; INVOLVED IN- bi [...] (829 aa)	•			0.409
	IQD18	IQD18 (IQ-domain 18); IQ-domain 18 (IQD18); FUNCTIONS IN- molecular_function unknown; EXPRESSED [...] (527 aa)		•	•	0.406
	Iqd4	Iqd4 (IQ-domain 4); calmodulin binding; IQ-domain 4 (Iqd4); FUNCTIONS IN- calmodulin binding; E [...] (527 aa)		•	•	0.404

Views:

Info & Parameters ...

Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:

Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining

required confidence (score):

interactors shown:

or custom value:

or custom limit:

additional (white) nodes

Server load: medium (65%)

Permalink