BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048052
(71 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8L4D8|IQD31_ARATH Protein IQ-DOMAIN 31 OS=Arabidopsis thaliana GN=IQD31 PE=1 SV=1
Length = 587
Score = 94.0 bits (232), Expect = 2e-19, Method: Composition-based stats.
Identities = 43/62 (69%), Positives = 54/62 (87%)
Query: 1 ARRAFRALKGIIRLQALIRGHLVRRQATATLGAMLGLVKLQALVRGRKVRHSNIGLEVGK 60
ARRAF ALKGIIRLQALIRGHLVRRQA ATL +++G+V+LQA RGR++R S+IG++V +
Sbjct: 128 ARRAFWALKGIIRLQALIRGHLVRRQAVATLFSVMGIVRLQAFARGREIRKSDIGVQVYR 187
Query: 61 TC 62
C
Sbjct: 188 KC 189
>sp|Q8LPG9|IQD14_ARATH Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana GN=IQD14 PE=1 SV=1
Length = 668
Score = 53.5 bits (127), Expect = 4e-07, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 38/50 (76%)
Query: 1 ARRAFRALKGIIRLQALIRGHLVRRQATATLGAMLGLVKLQALVRGRKVR 50
AR++FRALKG++RLQ ++RG+ V+RQ + M +V++Q+ ++ R+++
Sbjct: 337 ARKSFRALKGLVRLQGVVRGYSVKRQTINAMKYMQQVVRVQSQIQSRRIK 386
Score = 32.7 bits (73), Expect = 0.72, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Query: 13 RLQALIRGHLVRRQATATLGAMLGLVKLQALVRGRKVRHSNI 54
++Q RG++ R+ + A+ GLV+LQ +VRG V+ I
Sbjct: 327 KIQGAFRGYMARK----SFRALKGLVRLQGVVRGYSVKRQTI 364
>sp|Q9FXI5|IQD32_ARATH Protein IQ-DOMAIN 32 OS=Arabidopsis thaliana GN=IQD32 PE=1 SV=3
Length = 794
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 32/47 (68%)
Query: 1 ARRAFRALKGIIRLQALIRGHLVRRQATATLGAMLGLVKLQALVRGR 47
ARR K +I+LQA +RGHLVR QA +L + +VK+QA+VR R
Sbjct: 230 ARRELLRSKKVIKLQAAVRGHLVRSQAMGSLRCVQAIVKMQAMVRAR 276
Score = 32.7 bits (73), Expect = 0.70, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 11 IIRLQALIRGHLVRRQATATLGAMLGLVKLQALVRGRKVRHSNIG 55
I+ +QA +RG L RR+ + ++KLQA VRG VR +G
Sbjct: 218 IVVIQAAVRGFLARRELLRSKK----VIKLQAAVRGHLVRSQAMG 258
>sp|Q9SF32|IQD1_ARATH Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana GN=IQD1 PE=1 SV=1
Length = 454
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 1 ARRAFRALKGIIRLQALIRGHLVRRQATATLGAMLGLVKLQALVRGRKVRHS 52
ARR + ++G RL+ L+ G +V+RQA TL M L ++Q+ +R R++R S
Sbjct: 123 ARRESQVMRGQERLKLLMEGSVVQRQAAITLKCMQTLSRVQSQIRSRRIRMS 174
>sp|Q17LW0|MYO7A_AEDAE Myosin-VIIa OS=Aedes aegypti GN=ck PE=3 SV=1
Length = 2163
Score = 37.7 bits (86), Expect = 0.024, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 29/42 (69%), Gaps = 4/42 (9%)
Query: 5 FRALKG-IIRLQALIRGHLVRRQATATLGAMLGLVKLQALVR 45
FR L+G I+RLQA IRG+LVRR+ M ++K+Q+ VR
Sbjct: 797 FRHLRGHIVRLQARIRGYLVRREYGLK---MWAVIKIQSHVR 835
>sp|Q99MZ6|MYO7B_MOUSE Unconventional myosin-VIIb OS=Mus musculus GN=Myo7b PE=1 SV=3
Length = 2113
Score = 35.4 bits (80), Expect = 0.090, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 3 RAFRALKG-IIRLQALIRGHLVRRQATATLGAMLGLVKLQALVRGRKVRHS 52
R F+A++ I++LQA RG+LVR+Q A A +V +QA RG VR S
Sbjct: 827 RQFQAMRQRIVQLQARCRGYLVRQQVQAKRRA---VVIIQAHARGMVVRKS 874
Score = 32.3 bits (72), Expect = 0.95, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 2 RRAFR-ALKGIIRLQALIRGHLVRRQATATLGAMLGLVKLQALVRGRKVRH 51
R+ F+ L G RLQA+ R HL+ RQ A +V+LQA RG VR
Sbjct: 803 RKNFKLILVGFERLQAIARSHLLMRQFQAMRQR---IVQLQARCRGYLVRQ 850
>sp|P62288|ASPM_FELCA Abnormal spindle-like microcephaly-associated protein homolog
(Fragment) OS=Felis catus GN=ASPM PE=2 SV=1
Length = 3461
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 9 KGIIRLQALIRGHLVRRQATATLGAMLGLVKLQALVRGRKVRHSNIGL 56
+ I+LQA +RGHLVR+Q + A V LQ+ R RK+R + +
Sbjct: 1731 ESCIKLQAFVRGHLVRKQMRSQRKAA---VSLQSYFRMRKMRQHYLEM 1775
>sp|P62286|ASPM_CANFA Abnormal spindle-like microcephaly-associated protein homolog
OS=Canis familiaris GN=ASPM PE=2 SV=2
Length = 3469
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 9 KGIIRLQALIRGHLVRRQATATLGAMLGLVKLQALVRGRKVRHSNIGLEVGK 60
+ I+LQA +RGHLVR+Q A + LQ+ R RK R LE+ K
Sbjct: 1722 ESCIKLQAFVRGHLVRKQIRLQRQAAIS---LQSYFRMRKKRQ--YYLEIYK 1768
>sp|Q6PIF6|MYO7B_HUMAN Unconventional myosin-VIIb OS=Homo sapiens GN=MYO7B PE=2 SV=2
Length = 2116
Score = 32.3 bits (72), Expect = 0.76, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 3 RAFRALKG-IIRLQALIRGHLVRRQATATLGAMLGLVKLQALVRGRKVRHS 52
R ++A++ ++LQAL RG+LVR+Q A A +V +QA RG R +
Sbjct: 827 RQYQAMRQRTVQLQALCRGYLVRQQVQAKRRA---VVVIQAHARGMAARRN 874
>sp|P62292|ASPM_MACMU Abnormal spindle-like microcephaly-associated protein homolog
OS=Macaca mulatta GN=ASPM PE=3 SV=1
Length = 3479
Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 8/57 (14%)
Query: 12 IRLQALIRGHLVRRQATATLGAMLGLVKLQALVRGRKVRHSNIGLEVGKTCTPLMLL 68
I+LQA +RG+LVR+Q A ++ LQ+ R RK R + K C +M++
Sbjct: 1733 IKLQAFVRGYLVRKQMRLQRKA---VISLQSYFRMRKARQYYL-----KMCKAIMVI 1781
>sp|P62284|ASPM_ATEGE Abnormal spindle-like microcephaly-associated protein homolog
(Fragment) OS=Ateles geoffroyi GN=ASPM PE=3 SV=1
Length = 1564
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 9 KGIIRLQALIRGHLVRRQATATLGAMLGLVKLQALVRGRKVRHSNIGL 56
+ I+LQA +RG+LVR+Q A++ LQ+ R RK R + +
Sbjct: 368 ESCIKLQAFVRGYLVRKQIRLQRKAVIS---LQSYFRMRKARQYYLKM 412
>sp|P62295|ASPM_SAGLB Abnormal spindle-like microcephaly-associated protein homolog
(Fragment) OS=Saguinus labiatus GN=ASPM PE=3 SV=1
Length = 1527
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 9 KGIIRLQALIRGHLVRRQATATLGAMLGLVKLQALVRGRKVRHSNIGL 56
+ I+LQA +RG+LVR+Q A++ LQ+ R RK R + +
Sbjct: 323 ESCIKLQAFVRGYLVRKQMRLQRKAVIS---LQSYYRMRKARQCYLKM 367
>sp|P62291|ASPM_MACFA Abnormal spindle-like microcephaly-associated protein homolog
OS=Macaca fascicularis GN=ASPM PE=2 SV=1
Length = 3476
Score = 30.4 bits (67), Expect = 3.5, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 12 IRLQALIRGHLVRRQATATLGAMLGLVKLQALVRGRKVRH 51
I+LQA +RG+LVR+Q A ++ LQ+ R RK R
Sbjct: 1733 IKLQAFVRGYLVRKQMRLQRKA---VISLQSYFRMRKARQ 1769
>sp|Q8IZT6|ASPM_HUMAN Abnormal spindle-like microcephaly-associated protein OS=Homo sapiens
GN=ASPM PE=1 SV=2
Length = 3477
Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 12 IRLQALIRGHLVRRQATATLGAMLGLVKLQALVRGRKVRH 51
I+LQA +RG+LVR+Q A ++ LQ+ R RK R
Sbjct: 1733 IKLQAFVRGYLVRKQMRLQRKA---VISLQSYFRMRKARQ 1769
>sp|Q12280|IQG1_YEAST Ras GTPase-activating-like protein IQG1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=IQG1 PE=1 SV=1
Length = 1495
Score = 30.4 bits (67), Expect = 3.8, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 9 KGIIRLQALIRGHLVRRQATATLGAMLG-----LVKLQALVRGRKVRH 51
+ I +LQ+LIRG + R A++ LG +++L A +RG VRH
Sbjct: 601 ENISKLQSLIRG-IFTRSCLASIIYSLGKENCNIIQLSACIRGNAVRH 647
>sp|P62290|ASPM_HYLLA Abnormal spindle-like microcephaly-associated protein homolog
OS=Hylobates lar GN=ASPM PE=3 SV=1
Length = 3477
Score = 30.0 bits (66), Expect = 3.8, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 12 IRLQALIRGHLVRRQATATLGAMLGLVKLQALVRGRKVRH 51
I+LQA +RG+LVR+Q A ++ LQ+ R RK R
Sbjct: 1733 IKLQAFVRGYLVRKQMRLQRKA---VISLQSYFRMRKARQ 1769
>sp|P62287|ASPM_COLGU Abnormal spindle-like microcephaly-associated protein homolog
OS=Colobus guereza GN=ASPM PE=3 SV=1
Length = 3477
Score = 30.0 bits (66), Expect = 3.8, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 12 IRLQALIRGHLVRRQATATLGAMLGLVKLQALVRGRKVRH 51
I+LQA +RG+LVR+Q A ++ LQ+ R RK R
Sbjct: 1733 IKLQAFVRGYLVRKQMRLQRKA---VISLQSYFRMRKARQ 1769
>sp|P62289|ASPM_GORGO Abnormal spindle-like microcephaly-associated protein homolog
OS=Gorilla gorilla gorilla GN=ASPM PE=2 SV=1
Length = 3476
Score = 30.0 bits (66), Expect = 3.9, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 12 IRLQALIRGHLVRRQATATLGAMLGLVKLQALVRGRKVRH 51
I+LQA +RG+LVR+Q A ++ LQ+ R RK R
Sbjct: 1732 IKLQAFVRGYLVRKQMRLQRKA---VISLQSYFRMRKARQ 1768
>sp|P62285|ASPM_BOVIN Abnormal spindle-like microcephaly-associated protein homolog
(Fragment) OS=Bos taurus GN=ASPM PE=2 SV=1
Length = 3371
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 8/53 (15%)
Query: 10 GIIRLQALIRGHLVRRQATATLGAMLGLVKLQALVRGRKVRHSNIGLEVGKTC 62
I+LQA +RG+LVR+Q A V LQ+ R RK+R L+ K C
Sbjct: 1647 SCIKLQAFLRGYLVRKQVRLQRKAA---VSLQSYFRMRKMR-----LDYLKVC 1691
>sp|P62283|ASPM_AOTVO Abnormal spindle-like microcephaly-associated protein homolog
OS=Aotus vociferans GN=ASPM PE=2 SV=1
Length = 3473
Score = 30.0 bits (66), Expect = 4.3, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 12 IRLQALIRGHLVRRQATATLGAMLGLVKLQALVRGRKVRH 51
I+LQA +RG+LVR+Q A ++ LQ+ R RK R
Sbjct: 1729 IKLQAFVRGYLVRKQMRLQRKA---VISLQSYFRMRKARQ 1765
>sp|P62297|ASPM_SHEEP Abnormal spindle-like microcephaly-associated protein homolog
(Fragment) OS=Ovis aries GN=ASPM PE=2 SV=1
Length = 3374
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 8/53 (15%)
Query: 10 GIIRLQALIRGHLVRRQATATLGAMLGLVKLQALVRGRKVRHSNIGLEVGKTC 62
I+LQA +RG+LVR+Q A V LQ+ R RK+R LE K C
Sbjct: 1650 SCIKLQAFLRGYLVRKQVRLQRKAA---VLLQSYFRMRKMR-----LEYLKVC 1694
>sp|P62296|ASPM_SAIBB Abnormal spindle-like microcephaly-associated protein homolog
OS=Saimiri boliviensis boliviensis GN=ASPM PE=2 SV=1
Length = 3469
Score = 29.6 bits (65), Expect = 5.8, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 12 IRLQALIRGHLVRRQATATLGAMLGLVKLQALVRGRKVRH 51
I+LQA +RG+LVR+Q A ++ LQ+ R RK R
Sbjct: 1724 IKLQAFVRGYLVRKQMRLQRKA---VISLQSYFRMRKSRQ 1760
>sp|P56418|ACON2_HELPY Aconitate hydratase 2 OS=Helicobacter pylori (strain ATCC 700392 /
26695) GN=acnB PE=3 SV=2
Length = 852
Score = 29.3 bits (64), Expect = 7.1, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 21 HLVRRQATATLGAMLGLVKLQALVRGRKVRHSNIGLEVGKTCTPLMLL 68
H+ +AT LG MLG ++ L+ G + + NI E K +L+
Sbjct: 82 HISALEATTLLGTMLGGYNVEPLIMGLESQDKNIAKESAKALKTTLLV 129
>sp|Q9ZL64|ACON2_HELPJ Aconitate hydratase 2 OS=Helicobacter pylori (strain J99) GN=acnB
PE=3 SV=1
Length = 852
Score = 28.9 bits (63), Expect = 9.8, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 21 HLVRRQATATLGAMLGLVKLQALVRGRKVRHSNIGLEVGKTCTPLMLL 68
H+ +AT LG MLG ++ L+ G + + NI E K +L+
Sbjct: 82 HISALEATTLLGTMLGGYNVEPLIVGLESQDKNIAKESAKALKTTLLV 129
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.331 0.143 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,819,115
Number of Sequences: 539616
Number of extensions: 517671
Number of successful extensions: 1618
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 1536
Number of HSP's gapped (non-prelim): 84
length of query: 71
length of database: 191,569,459
effective HSP length: 43
effective length of query: 28
effective length of database: 168,365,971
effective search space: 4714247188
effective search space used: 4714247188
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 55 (25.8 bits)