BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048056
(143 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GWP3|COPT6_ARATH Copper transporter 6 OS=Arabidopsis thaliana GN=COPT6 PE=2 SV=1
Length = 145
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 65/104 (62%), Positives = 86/104 (82%), Gaps = 1/104 (0%)
Query: 22 HMTFFWGHNTQVLFSGWPGSSTGMYVLALVFVFSLAVIVEWLSHYNIVKP-GASRVAAGL 80
HMTFFWG NT++LFSGWPG+S GMYVL L+ VF LAVIVEWL+H +I++ G++ A GL
Sbjct: 26 HMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLAVIVEWLAHSSILRGRGSTSRAKGL 85
Query: 81 FKTGLHGVRVGLAYMVVLAVMSFNGGIFIAAVVGHAVGYLLFGS 124
+T ++ ++ GLAY+V+LAVMSFNGG+FI A+ G AVG++LFGS
Sbjct: 86 VQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAGFAVGFMLFGS 129
>sp|Q39065|COPT1_ARATH Copper transporter 1 OS=Arabidopsis thaliana GN=COPT1 PE=2 SV=2
Length = 170
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 63/107 (58%), Positives = 87/107 (81%), Gaps = 5/107 (4%)
Query: 24 TFFWGHNTQVLFSGWPGSSTGMYVLALVFVFSLAVIVEWLSHYNIVK----PGASRVAAG 79
TFFWG NT+VLFSGWPG+S+GMY L L+FVF LAV+ EWL+H ++++ A+R AAG
Sbjct: 45 TFFWGKNTEVLFSGWPGTSSGMYALCLIFVFFLAVLTEWLAHSSLLRGSTGDSANR-AAG 103
Query: 80 LFKTGLHGVRVGLAYMVVLAVMSFNGGIFIAAVVGHAVGYLLFGSRV 126
L +T ++ +R+GLAY+V+LAVMSFN G+F+ A+ GHAVG++LFGS+
Sbjct: 104 LIQTAVYTLRIGLAYLVMLAVMSFNAGVFLVALAGHAVGFMLFGSQT 150
>sp|Q8SAA5|COPT4_ARATH Copper transporter 4 OS=Arabidopsis thaliana GN=COPT4 PE=2 SV=2
Length = 145
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 67/130 (51%), Positives = 90/130 (69%), Gaps = 7/130 (5%)
Query: 3 VTTEAWNTTGLHV----HRKRIAHMTFFWGHNTQVLFSGWPGSSTGMYVLALVFVFSLAV 58
V EAWNTT HR + H TF+WG+N QVLFSGWPGS GMY LAL+FVF LA
Sbjct: 8 VVVEAWNTTTTTQTQTPHRPSLLHPTFYWGYNCQVLFSGWPGSDRGMYALALIFVFFLAF 67
Query: 59 IVEWL---SHYNIVKPGASRVAAGLFKTGLHGVRVGLAYMVVLAVMSFNGGIFIAAVVGH 115
+ EWL S + +K GA ++A F+T ++ V+ G +Y+V+LAV+SFNGG+F+AA+ GH
Sbjct: 68 LAEWLARCSDASSIKQGADKLAKVAFRTAMYTVKSGFSYLVILAVVSFNGGVFLAAIFGH 127
Query: 116 AVGYLLFGSR 125
A+G+ +F R
Sbjct: 128 ALGFAVFRGR 137
>sp|Q9STG2|COPT2_ARATH Copper transporter 2 OS=Arabidopsis thaliana GN=COPT2 PE=2 SV=1
Length = 158
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 80/101 (79%), Gaps = 1/101 (0%)
Query: 25 FFWGHNTQVLFSGWPGSSTGMYVLALVFVFSLAVIVEWLSHYNIVK-PGASRVAAGLFKT 83
FFWG NT+VLFSGWPG+S+GMY L L+ +F LAVI EWL+H I++ G++ AAGL +T
Sbjct: 34 FFWGKNTEVLFSGWPGTSSGMYALCLIVIFLLAVIAEWLAHSPILRVSGSTNRAAGLAQT 93
Query: 84 GLHGVRVGLAYMVVLAVMSFNGGIFIAAVVGHAVGYLLFGS 124
++ ++ GL+Y+V+LAVMSFN G+FI A+ G+ VG+ LFGS
Sbjct: 94 AVYTLKTGLSYLVMLAVMSFNAGVFIVAIAGYGVGFFLFGS 134
>sp|Q9FGU8|COPT3_ARATH Copper transporter 3 OS=Arabidopsis thaliana GN=COPT3 PE=2 SV=1
Length = 151
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 77/113 (68%), Gaps = 3/113 (2%)
Query: 16 HRKR---IAHMTFFWGHNTQVLFSGWPGSSTGMYVLALVFVFSLAVIVEWLSHYNIVKPG 72
HR R + HMTFFWG T+VLF GWPG+S MY + L +F ++ E LS +K G
Sbjct: 22 HRHRHGGMMHMTFFWGKTTEVLFDGWPGTSLKMYWVCLAVIFVISAFSECLSRCGFMKSG 81
Query: 73 ASRVAAGLFKTGLHGVRVGLAYMVVLAVMSFNGGIFIAAVVGHAVGYLLFGSR 125
+ + GL +T ++ VR L+Y+V+LAVMSFNGG+F+AA+ G +G+++FGSR
Sbjct: 82 PASLGGGLLQTAVYTVRAALSYLVMLAVMSFNGGVFVAAMAGFGLGFMIFGSR 134
>sp|Q94EE4|COPT1_ORYSJ Copper transporter 1 OS=Oryza sativa subsp. japonica GN=COPT1 PE=2
SV=1
Length = 161
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/130 (48%), Positives = 83/130 (63%), Gaps = 9/130 (6%)
Query: 19 RIAHMTFFWGHNTQVLFSGWPGSSTGMYVLALVFVFSLAVIVEWL-----SHYNIVKPGA 73
R HMTFFWG N++VLF+ WPG+ GMY LAL+FVF+LAVIVE+L
Sbjct: 31 RYTHMTFFWGKNSEVLFTMWPGTRGGMYALALIFVFALAVIVEFLGSRRADACLAALARR 90
Query: 74 SRVAAGLFKTGLHGVRVGLAYMVVLAVMSFNGGIFIAAVVGHAVGYLLFGSRVRMLVTKL 133
+ A GL + +H VRVG+AY+++LA+MSFNGG+F+ AV GHA G+L F R +
Sbjct: 91 APAAGGLARAAVHTVRVGVAYLLMLALMSFNGGVFLVAVAGHAAGFLAF----RAGLCGG 146
Query: 134 GMREEEKRKR 143
+ EE RK
Sbjct: 147 PAQVEEDRKN 156
>sp|Q60EN8|COPT2_ORYSJ Copper transporter 2 OS=Oryza sativa subsp. japonica GN=COPT2 PE=1
SV=1
Length = 151
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 87/133 (65%), Gaps = 7/133 (5%)
Query: 15 VHRKRIAHMTFFWGHNTQVLFSGWPGSSTGMYVLALVFVFSLAVIVEWLSHYNIVK---- 70
V + R HMTFFWG NT+VLF+ WPG+ GMY LA++F+F+LAV++E+ Y +++
Sbjct: 17 VKKARYMHMTFFWGKNTEVLFTLWPGARGGMYALAILFMFALAVLLEF-RGYRVLEARLA 75
Query: 71 PGASRVAAGLFKTGLHGVRVGLAYMVVLAVMSFNGGIFIAAVVGHAVGYLLFGSRVRMLV 130
+ AA +T +H VRVG+AY+++LA+MSFNGG+F+A V GHA G+L F R +
Sbjct: 76 RRRAPRAAAALRTAVHAVRVGVAYLIMLALMSFNGGVFLAIVAGHAAGFLAF--RAGLCG 133
Query: 131 TKLGMREEEKRKR 143
EE RK
Sbjct: 134 GGPAPPLEEDRKN 146
>sp|Q7XTF8|COPT6_ORYSJ Copper transporter 6 OS=Oryza sativa subsp. japonica GN=COPT6 PE=2
SV=1
Length = 184
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 70/121 (57%), Gaps = 15/121 (12%)
Query: 22 HMTFFWGHNTQVLFSGWPGS-STGMYVLALVFVFSLAVIVEWLS--------------HY 66
HMTFFW VL GWPG GMY L L+FV +LA + E LS
Sbjct: 39 HMTFFWSDRAVVLIRGWPGERGAGMYALCLLFVLALAALTEGLSVLSRRLARRGGGAASS 98
Query: 67 NIVKPGASRVAAGLFKTGLHGVRVGLAYMVVLAVMSFNGGIFIAAVVGHAVGYLLFGSRV 126
+ +P + ++ T +H R+G+AY+V+LAVMSFN G+ +AAV GHA+G+LL SRV
Sbjct: 99 DGGRPAPAPASSAALLTAVHAARMGMAYLVMLAVMSFNVGVLLAAVAGHALGFLLARSRV 158
Query: 127 R 127
R
Sbjct: 159 R 159
>sp|Q93VM8|COPT5_ARATH Copper transporter 5 OS=Arabidopsis thaliana GN=COPT5 PE=2 SV=1
Length = 146
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 61/128 (47%), Gaps = 25/128 (19%)
Query: 22 HMTFFWGHNTQVLFSGWPGSSTGMYVLALVFVFSLAVIVEWLSHYNIV---------KPG 72
HMTF+WG +LF W S Y+L L+ F + ++L + I P
Sbjct: 3 HMTFYWGIKATILFDFWKTDSWLSYILTLIACFVFSAFYQYLENRRIQFKSLSSSRRAPP 62
Query: 73 ASRVAAG-----LFKTG-----------LHGVRVGLAYMVVLAVMSFNGGIFIAAVVGHA 116
R ++G + K+G L GV + Y+++LA MSFNGG+FIA VVG
Sbjct: 63 PPRSSSGVSAPLIPKSGTRSAAKAASVLLFGVNAAIGYLLMLAAMSFNGGVFIAIVVGLT 122
Query: 117 VGYLLFGS 124
GY +F S
Sbjct: 123 AGYAVFRS 130
>sp|Q10KT6|COPT4_ORYSJ Copper transporter 4 OS=Oryza sativa subsp. japonica GN=COPT4 PE=2
SV=1
Length = 183
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 62/111 (55%), Gaps = 12/111 (10%)
Query: 23 MTFFWGHNTQVLFSGWPG--SSTGMYVLALVFVFSLAVI----------VEWLSHYNIVK 70
M+F WGH VLF WPG + GMY L L+ V +LA + ++ + +
Sbjct: 34 MSFTWGHRAVVLFPRWPGDRAGVGMYFLCLLLVLALAALAEALSAASRRLDLDLDLSRSR 93
Query: 71 PGASRVAAGLFKTGLHGVRVGLAYMVVLAVMSFNGGIFIAAVVGHAVGYLL 121
R L G+H R+GLAY+V+LAVMSFN G+ +AAV GHA G+LL
Sbjct: 94 GRRRRRRQQLLAAGVHAARMGLAYLVMLAVMSFNAGVLLAAVAGHAAGFLL 144
>sp|Q5ZD08|COPT3_ORYSJ Copper transporter 3 OS=Oryza sativa subsp. japonica GN=COPT3 PE=2
SV=1
Length = 150
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 74/107 (69%), Gaps = 1/107 (0%)
Query: 17 RKRIAHMTFFWGHNTQVLFSGWPGSSTGMYVLALVFVFSLAVIVEWLSHYNIVK-PGASR 75
RKR HMTF+WG N+++LF+GWPG+S GMY LAL VF+LAV++E+L + +
Sbjct: 24 RKRYMHMTFYWGKNSEILFTGWPGASGGMYALALAAVFALAVLLEFLGSPRVQESSSLGS 83
Query: 76 VAAGLFKTGLHGVRVGLAYMVVLAVMSFNGGIFIAAVVGHAVGYLLF 122
+H VRVGLAY+++LA+MSFN G+ +AAV GHA G+L F
Sbjct: 84 RRRRATAAAVHAVRVGLAYLLMLALMSFNVGVLLAAVAGHAAGFLAF 130
>sp|Q69P80|COP51_ORYSJ Copper transporter 5.1 OS=Oryza sativa subsp. japonica GN=COPT5.1
PE=2 SV=1
Length = 149
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 67/131 (51%), Gaps = 28/131 (21%)
Query: 22 HMTFFWGHNTQVLFSGWPGSSTGMYVLALVFVFSLAVIVEWLSHYNI------------V 69
HMTF+WG + +LF GW ++ Y+L+LV + + ++L + I +
Sbjct: 3 HMTFYWGKDVTILFDGWRTATWTGYLLSLVALLLASAFYQYLEAFRIRVKLLAGAKPASI 62
Query: 70 KPGAS----------------RVAAGLFKTGLHGVRVGLAYMVVLAVMSFNGGIFIAAVV 113
P AS R A L GL GV GL Y+++LAVMSFNGG+F+A VV
Sbjct: 63 PPPASSDAARAPLLLPSSAAGRWPARLATAGLFGVNSGLGYLLMLAVMSFNGGVFVAVVV 122
Query: 114 GHAVGYLLFGS 124
G A GYL F S
Sbjct: 123 GLAAGYLAFRS 133
>sp|P38865|CTR2_YEAST Copper transport protein CTR2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CTR2 PE=1 SV=1
Length = 189
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 55/106 (51%), Gaps = 13/106 (12%)
Query: 22 HMTFFWGH-NTQVLFSGWPGSSTGMYVLALVFVFSLAVIVEWLSHYNIVKPGASRV---- 76
+M F W + NT V+F W + +L+ + +F LA + E+L + + + RV
Sbjct: 60 NMLFSWSYKNTCVVFEWWHIKTLPGLILSCLAIFGLAYLYEYLKYCVHKRQLSQRVLLPN 119
Query: 77 --------AAGLFKTGLHGVRVGLAYMVVLAVMSFNGGIFIAAVVG 114
A + + L+G++VG ++M++L M++NG + +A V G
Sbjct: 120 RSLTKINQADKVSNSILYGLQVGFSFMLMLVFMTYNGWLMLAVVCG 165
>sp|Q5RAS6|COPT1_PONAB High affinity copper uptake protein 1 OS=Pongo abelii GN=SLC31A1
PE=2 SV=1
Length = 190
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 65/150 (43%), Gaps = 31/150 (20%)
Query: 4 TTEAWNTTGLHVHRKRIAHMTFFWG-HNTQVLFSGWPGSSTGMYVLALVFVFSLAVIVEW 62
TT A ++ G + MTF++G N ++LFSG ++ G A V VF LA+ E
Sbjct: 26 TTSASHSRGGGDSSMMMMPMTFYFGFKNVELLFSGLVINTAGEMAGAFVAVFLLAMFYEG 85
Query: 63 LS--------------HYNIVK-PGASRVA---------------AGLFKTGLHGVRVGL 92
L YN + PG + L +T LH ++V +
Sbjct: 86 LKIARESLLRKSQVSIRYNSMPVPGPNGTILMETHKTVGQQMLSFPHLLQTVLHIIQVVI 145
Query: 93 AYMVVLAVMSFNGGIFIAAVVGHAVGYLLF 122
+Y ++L M++NG + IA G GY LF
Sbjct: 146 SYFLMLIFMTYNGYLCIAVAAGAGTGYFLF 175
>sp|O15431|COPT1_HUMAN High affinity copper uptake protein 1 OS=Homo sapiens GN=SLC31A1
PE=1 SV=1
Length = 190
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 58/131 (44%), Gaps = 31/131 (23%)
Query: 23 MTFFWG-HNTQVLFSGWPGSSTGMYVLALVFVFSLAVIVEWLS--------------HYN 67
MTF++G N ++LFSG ++ G A V VF LA+ E L YN
Sbjct: 45 MTFYFGFKNVELLFSGLVINTAGEMAGAFVAVFLLAMFYEGLKIARESLLRKSQVSIRYN 104
Query: 68 IVK-PGASRVA---------------AGLFKTGLHGVRVGLAYMVVLAVMSFNGGIFIAA 111
+ PG + L +T LH ++V ++Y ++L M++NG + IA
Sbjct: 105 SMPVPGPNGTILMETHKTVGQQMLSFPHLLQTVLHIIQVVISYFLMLIFMTYNGYLCIAV 164
Query: 112 VVGHAVGYLLF 122
G GY LF
Sbjct: 165 AAGAGTGYFLF 175
>sp|Q9JK41|COPT1_RAT High affinity copper uptake protein 1 OS=Rattus norvegicus
GN=Slc31a1 PE=2 SV=1
Length = 187
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 61/145 (42%), Gaps = 32/145 (22%)
Query: 10 TTGLHVHRKRIAHMTFFWG-HNTQVLFSGWPGSSTGMYVLALVFVFSLAVIVEWLS---- 64
T+ H H + MTF++G N +LFS ++ G A V VF LA+ E L
Sbjct: 30 TSASHSHEMMMP-MTFYFGFKNVDLLFSSLVINTPGEMAGAFVAVFLLAMFYEGLKIARE 88
Query: 65 ----------HYNIVK-PGASRVA---------------AGLFKTGLHGVRVGLAYMVVL 98
YN + PG + L +T LH ++V ++Y ++L
Sbjct: 89 GLLRKSQVSIRYNSMPVPGPNGTILMETHKTVGQQMLSFPHLLQTVLHIIQVVISYFLML 148
Query: 99 AVMSFNGGIFIAAVVGHAVGYLLFG 123
M++NG + IA G GY LF
Sbjct: 149 IFMTYNGYLCIAVAAGAGTGYFLFS 173
>sp|Q8WNR0|COPT1_PIG High affinity copper uptake protein 1 OS=Sus scrofa GN=SLC31A1 PE=2
SV=1
Length = 189
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 59/138 (42%), Gaps = 31/138 (22%)
Query: 16 HRKRIAHMTFFWG-HNTQVLFSGWPGSSTGMYVLALVFVFSLAVIVEWLS---------- 64
H + MTF++G +VLF+G ++ G A V VF LA+ E L
Sbjct: 37 HESMMMPMTFYFGFKKVEVLFAGLVINTAGEMAGAFVAVFLLAMFYEGLKIAREGLLRKS 96
Query: 65 ----HYNIVK-PGASRVA---------------AGLFKTGLHGVRVGLAYMVVLAVMSFN 104
YN + PG + L +T LH ++V ++Y ++L M++N
Sbjct: 97 QVSIRYNSMPVPGPNGTILMETHKTVGQQMLSFPHLLQTVLHIIQVVISYFLMLIFMTYN 156
Query: 105 GGIFIAAVVGHAVGYLLF 122
G + IA G GY LF
Sbjct: 157 GYLCIAVAAGAGTGYFLF 174
>sp|Q6Z0Q9|COP52_ORYSJ Putative copper transporter 5.2 OS=Oryza sativa subsp. japonica
GN=COPT5.2 PE=3 SV=1
Length = 176
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 24/29 (82%)
Query: 94 YMVVLAVMSFNGGIFIAAVVGHAVGYLLF 122
Y+++LAVMSFNGG+F+A V G A G+L F
Sbjct: 125 YLLMLAVMSFNGGVFLAVVAGLAAGHLAF 153
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 5/24 (20%)
Query: 22 HMTFFWGHNTQVLF-----SGWPG 40
HM+F+WG + +LF SGWPG
Sbjct: 3 HMSFYWGTSVTILFDGWRTSGWPG 26
>sp|Q9CPU9|COPT2_MOUSE Probable low affinity copper uptake protein 2 OS=Mus musculus
GN=Slc31a2 PE=1 SV=1
Length = 143
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 29/40 (72%)
Query: 82 KTGLHGVRVGLAYMVVLAVMSFNGGIFIAAVVGHAVGYLL 121
++ +H ++V + Y V+LAVMS+N IF+ V+G AVGY L
Sbjct: 96 QSLVHVIQVVIGYFVMLAVMSYNTWIFLGVVLGSAVGYYL 135
>sp|Q8K211|COPT1_MOUSE High affinity copper uptake protein 1 OS=Mus musculus GN=Slc31a1
PE=2 SV=1
Length = 196
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 56/131 (42%), Gaps = 31/131 (23%)
Query: 23 MTFFWG-HNTQVLFSGWPGSSTGMYVLALVFVFSLAVIVEWLS--------------HYN 67
MTF++ N +LFSG ++ G A V VF LA+ E L YN
Sbjct: 51 MTFYFDFKNVNLLFSGLVINTPGEMAGAFVAVFLLAMFYEGLKIAREGLLRKSQVSIRYN 110
Query: 68 IVK-PGASRVA---------------AGLFKTGLHGVRVGLAYMVVLAVMSFNGGIFIAA 111
+ PG + L +T LH ++V ++Y ++L M++NG + IA
Sbjct: 111 SMPVPGPNGTILMETHKTVGQQMLSFPHLLQTVLHIIQVVISYFLMLIFMTYNGYLCIAV 170
Query: 112 VVGHAVGYLLF 122
G GY LF
Sbjct: 171 AAGAGTGYFLF 181
>sp|O15432|COPT2_HUMAN Probable low affinity copper uptake protein 2 OS=Homo sapiens
GN=SLC31A2 PE=1 SV=1
Length = 143
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 82 KTGLHGVRVGLAYMVVLAVMSFNGGIFIAAVVGHAVGYLL 121
++ +H ++V + Y ++LAVMS+N IF+ V+G AVGY L
Sbjct: 96 QSLIHVIQVVIGYFIMLAVMSYNTWIFLGVVLGSAVGYYL 135
>sp|Q7YXD4|P80_DICDI Protein P80 OS=Dictyostelium discoideum GN=p80 PE=2 SV=1
Length = 530
Score = 37.4 bits (85), Expect = 0.030, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 85 LHGVRVGLAYMVVLAVMSFNGGIFIAAVVGHAVGYLLFG 123
LH + + +Y ++L M+FN +F A + G VG +LFG
Sbjct: 479 LHAIELTCSYALMLVAMTFNVALFFAVIAGVLVGNILFG 517
>sp|Q06686|CTR3_YEAST Copper transport protein CTR3 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CTR3 PE=1 SV=1
Length = 241
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 14/68 (20%)
Query: 63 LSHYNIVKPGASRVAAGLFKTGL-HGVRV-------GLAYMVVLAVMSFNGGIFIAAVVG 114
LS ++ P L+ T L H +RV GL+Y+++L M +NG I I+ ++G
Sbjct: 149 LSCCTLITP------VDLYPTFLDHMIRVTIFVLQWGLSYIIMLLFMYYNGYIIISCLIG 202
Query: 115 HAVGYLLF 122
VG +F
Sbjct: 203 AIVGRFIF 210
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.328 0.139 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,434,038
Number of Sequences: 539616
Number of extensions: 1757513
Number of successful extensions: 5619
Number of sequences better than 100.0: 30
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 5574
Number of HSP's gapped (non-prelim): 35
length of query: 143
length of database: 191,569,459
effective HSP length: 106
effective length of query: 37
effective length of database: 134,370,163
effective search space: 4971696031
effective search space used: 4971696031
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)