Your job contains 1 sequence.
>048058
MAAAARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSR
KAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN
VNQKRYAIVSAIAASAVPSLVMARGHKIETVPEMPLV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 048058
(157 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2074904 - symbol:AT3G09630 species:3702 "Arabi... 670 7.4e-66 1
TAIR|locus:2151296 - symbol:AT5G02870 species:3702 "Arabi... 665 2.5e-65 1
ZFIN|ZDB-GENE-030131-9034 - symbol:rpl4 "ribosomal protei... 569 3.7e-55 1
UNIPROTKB|Q5ZII1 - symbol:RPL4 "Uncharacterized protein" ... 564 1.3e-54 1
UNIPROTKB|Q58DW0 - symbol:RPL4 "60S ribosomal protein L4"... 563 1.6e-54 1
UNIPROTKB|E2R546 - symbol:RPL4 "60S ribosomal protein L4"... 563 1.6e-54 1
UNIPROTKB|F1PVZ2 - symbol:RPL4 "60S ribosomal protein L4"... 563 1.6e-54 1
UNIPROTKB|J9JHV8 - symbol:RPL4 "60S ribosomal protein L4"... 563 1.6e-54 1
UNIPROTKB|P36578 - symbol:RPL4 "60S ribosomal protein L4"... 563 1.6e-54 1
UNIPROTKB|F1SJJ5 - symbol:RPL4 "60S ribosomal protein L4"... 563 1.6e-54 1
MGI|MGI:1915141 - symbol:Rpl4 "ribosomal protein L4" spec... 563 1.6e-54 1
UNIPROTKB|Q6P3V9 - symbol:Rpl4 "Ribosomal protein L4" spe... 562 2.1e-54 1
UNIPROTKB|Q28346 - symbol:RPL4 "60S ribosomal protein L4"... 560 3.4e-54 1
RGD|619824 - symbol:Rpl4 "ribosomal protein L4" species:1... 557 7.0e-54 1
UNIPROTKB|G3MXR5 - symbol:G3MXR5 "Uncharacterized protein... 541 3.5e-52 1
POMBASE|SPBP8B7.03c - symbol:rpl402 "60S ribosomal protei... 537 9.2e-52 1
UNIPROTKB|J9P0P0 - symbol:J9P0P0 "Uncharacterized protein... 536 1.2e-51 1
UNIPROTKB|Q6EE59 - symbol:RPL4 "Ribosomal protein L4" spe... 535 1.5e-51 1
POMBASE|SPBC1711.06 - symbol:rpl401 "60S ribosomal protei... 532 3.1e-51 1
ASPGD|ASPL0000011665 - symbol:AN8176 species:162425 "Emer... 513 3.2e-49 1
SGD|S000000235 - symbol:RPL4A "Ribosomal 60S subunit prot... 512 4.1e-49 1
SGD|S000002419 - symbol:RPL4B "Ribosomal 60S subunit prot... 512 4.1e-49 1
UNIPROTKB|G4MZ86 - symbol:MGG_08190 "60S ribosomal protei... 510 6.7e-49 1
UNIPROTKB|H3BTP7 - symbol:RPL4 "60S ribosomal protein L4"... 507 1.4e-48 1
FB|FBgn0003279 - symbol:RpL4 "Ribosomal protein L4" speci... 500 7.7e-48 1
CGD|CAL0003773 - symbol:RPL4B species:5476 "Candida albic... 493 4.2e-47 1
UNIPROTKB|Q59ZX4 - symbol:RPL4B "Likely cytosolic ribosom... 493 4.2e-47 1
DICTYBASE|DDB_G0277803 - symbol:rpl4 "60S ribosomal prote... 486 2.3e-46 1
WB|WBGene00004415 - symbol:rpl-4 species:6239 "Caenorhabd... 464 5.0e-44 1
GENEDB_PFALCIPARUM|PFE0350c - symbol:PFE0350c "60S riboso... 461 1.0e-43 1
UNIPROTKB|Q8I431 - symbol:PFE0350c "60S ribosomal protein... 461 1.0e-43 1
UNIPROTKB|H3BU31 - symbol:RPL4 "60S ribosomal protein L4"... 459 1.7e-43 1
UNIPROTKB|H3BM89 - symbol:RPL4 "Ribosomal protein L4, iso... 221 2.8e-18 1
>TAIR|locus:2074904 [details] [associations]
symbol:AT3G09630 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0005773 "vacuole"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0001510
"RNA methylation" evidence=RCA] [GO:0009220 "pyrimidine
ribonucleotide biosynthetic process" evidence=RCA] [GO:0009664
"plant-type cell wall organization" evidence=RCA] [GO:0042545 "cell
wall modification" evidence=RCA] InterPro:IPR002136
InterPro:IPR023574 Pfam:PF00573 GO:GO:0005886 GO:GO:0009506
GO:GO:0005618 GO:GO:0009507 GO:GO:0005773 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0006412 EMBL:AC016661
GO:GO:0003735 GO:GO:0022625 eggNOG:COG0088 Gene3D:3.40.1370.10
SUPFAM:SSF52166 EMBL:AY056781 EMBL:BT002438 EMBL:BT008495
IPI:IPI00542248 RefSeq:NP_187574.1 UniGene:At.24636
ProteinModelPortal:Q9SF40 SMR:Q9SF40 IntAct:Q9SF40 STRING:Q9SF40
PaxDb:Q9SF40 PRIDE:Q9SF40 EnsemblPlants:AT3G09630.1 GeneID:820120
KEGG:ath:AT3G09630 GeneFarm:380 TAIR:At3g09630 HOGENOM:HOG000107331
InParanoid:Q9SF40 KO:K02930 OMA:HTNMRKN PhylomeDB:Q9SF40
ProtClustDB:PLN00185 Genevestigator:Q9SF40 InterPro:IPR025755
InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939 Uniprot:Q9SF40
Length = 406
Score = 670 (240.9 bits), Expect = 7.4e-66, P = 7.4e-66
Identities = 123/156 (78%), Positives = 135/156 (86%)
Query: 2 AAAARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRK 61
AAAARPL+T+Q+L+GDM+TD SSTV LPDVM A +RPDIV FVH+ IS NSRQPYAVS+K
Sbjct: 3 AAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSKK 62
Query: 62 AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121
AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++NV
Sbjct: 63 AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNV 122
Query: 122 NQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLV 157
N KR+ P+LVMARGHKIE VPEMPLV
Sbjct: 123 NMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLV 158
>TAIR|locus:2151296 [details] [associations]
symbol:AT5G02870 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS] [GO:0009507
"chloroplast" evidence=IDA] [GO:0005773 "vacuole" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0005774 "vacuolar membrane"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0001510
"RNA methylation" evidence=RCA] [GO:0009220 "pyrimidine
ribonucleotide biosynthetic process" evidence=RCA] [GO:0009664
"plant-type cell wall organization" evidence=RCA] [GO:0042545 "cell
wall modification" evidence=RCA] InterPro:IPR002136
InterPro:IPR023574 Pfam:PF00573 GO:GO:0005886 GO:GO:0009506
GO:GO:0005774 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507
GO:GO:0005730 GO:GO:0006412 GO:GO:0003735 EMBL:AL162973
GO:GO:0022625 eggNOG:COG0088 Gene3D:3.40.1370.10 SUPFAM:SSF52166
HOGENOM:HOG000107331 KO:K02930 ProtClustDB:PLN00185
InterPro:IPR025755 InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
EMBL:AY054479 EMBL:AY059886 EMBL:AY062452 EMBL:AY093384
EMBL:AY114639 EMBL:AY136320 EMBL:BT002088 EMBL:Z18118 EMBL:Z18460
EMBL:Z17589 IPI:IPI00521292 PIR:T48308 RefSeq:NP_195907.1
UniGene:At.21294 ProteinModelPortal:P49691 SMR:P49691 IntAct:P49691
STRING:P49691 PaxDb:P49691 PRIDE:P49691 ProMEX:P49691
EnsemblPlants:AT5G02870.1 GeneID:831756 KEGG:ath:AT5G02870
GeneFarm:381 TAIR:At5g02870 InParanoid:P49691 OMA:HRRVNIT
PhylomeDB:P49691 Genevestigator:P49691 GermOnline:AT5G02870
Uniprot:P49691
Length = 407
Score = 665 (239.2 bits), Expect = 2.5e-65, P = 2.5e-65
Identities = 122/156 (78%), Positives = 134/156 (85%)
Query: 2 AAAARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRK 61
+AAARPL+TVQ L+GDM+TD S+TV LPDVM A +RPDIV FVH+ IS NSRQPYAVS+K
Sbjct: 4 SAAARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSKK 63
Query: 62 AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121
AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++NV
Sbjct: 64 AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNV 123
Query: 122 NQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLV 157
N KR+ P+LVMARGHKIE VPEMPLV
Sbjct: 124 NMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLV 159
>ZFIN|ZDB-GENE-030131-9034 [details] [associations]
symbol:rpl4 "ribosomal protein L4" species:7955
"Danio rerio" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002136 InterPro:IPR023574
Pfam:PF00573 ZFIN:ZDB-GENE-030131-9034 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.40.1370.10 SUPFAM:SSF52166
HOGENOM:HOG000107331 KO:K02930 OMA:HTNMRKN InterPro:IPR025755
Pfam:PF14374 GeneTree:ENSGT00390000018145 CTD:6124
HOVERGEN:HBG001453 EMBL:CT863714 EMBL:BX927065 EMBL:BC049520
EMBL:BC067580 IPI:IPI00505526 RefSeq:NP_998272.1 UniGene:Dr.35139
SMR:Q7ZW95 STRING:Q7ZW95 Ensembl:ENSDART00000060363 GeneID:337090
KEGG:dre:337090 InParanoid:Q7ZW95 NextBio:20812054 Uniprot:Q7ZW95
Length = 375
Score = 569 (205.4 bits), Expect = 3.7e-55, P = 3.7e-55
Identities = 107/155 (69%), Positives = 123/155 (79%)
Query: 3 AAARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKA 62
A ARPLI+V S +G+ T + V +P V +A IRPDIV FVH+N+ KN RQPYAVS A
Sbjct: 2 ACARPLISVYSEKGE--TSGKNVV-MPAVFRAPIRPDIVNFVHTNMRKNKRQPYAVSELA 58
Query: 63 GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
GHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++NVN
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNVN 118
Query: 123 QKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLV 157
QKRY PSLVMA+GH+IE +PE+PLV
Sbjct: 119 QKRYAMCSALAASALPSLVMAKGHRIEEIPEVPLV 153
>UNIPROTKB|Q5ZII1 [details] [associations]
symbol:RPL4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IEA] InterPro:IPR002136 InterPro:IPR023574
Pfam:PF00573 GO:GO:0005730 GO:GO:0006412 GO:GO:0003735
GO:GO:0022625 eggNOG:COG0088 Gene3D:3.40.1370.10 SUPFAM:SSF52166
HOGENOM:HOG000107331 KO:K02930 InterPro:IPR025755
InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
GeneTree:ENSGT00390000018145 CTD:6124 HOVERGEN:HBG001453
OrthoDB:EOG483D4X EMBL:AADN02038915 EMBL:AJ720803 IPI:IPI00575596
RefSeq:NP_001007480.1 UniGene:Gga.4523 SMR:Q5ZII1 STRING:Q5ZII1
Ensembl:ENSGALT00000012495 GeneID:415551 KEGG:gga:415551
InParanoid:Q5ZII1 OMA:PEDKKSA NextBio:20819134 Uniprot:Q5ZII1
Length = 421
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 104/155 (67%), Positives = 122/155 (78%)
Query: 3 AAARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKA 62
A ARPLI+V S +G+ + V LP V KA IRPD+V FVH+N+ KN+RQPYAVS A
Sbjct: 2 ACARPLISVYSEKGEAS---GKNVTLPAVFKAPIRPDVVNFVHTNLRKNNRQPYAVSELA 58
Query: 63 GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
GHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++NV
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNVT 118
Query: 123 QKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLV 157
QKRY P+LVM++GH+IE +PE+PLV
Sbjct: 119 QKRYAICSALAASALPALVMSKGHRIEEIPELPLV 153
>UNIPROTKB|Q58DW0 [details] [associations]
symbol:RPL4 "60S ribosomal protein L4" species:9913 "Bos
taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002136 InterPro:IPR023574
Pfam:PF00573 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
eggNOG:COG0088 Gene3D:3.40.1370.10 SUPFAM:SSF52166
HOGENOM:HOG000107331 KO:K02930 OMA:HTNMRKN InterPro:IPR025755
InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
GeneTree:ENSGT00390000018145 EMBL:BT021487 EMBL:BC102521
IPI:IPI00699827 RefSeq:NP_001014894.1 UniGene:Bt.48893
ProteinModelPortal:Q58DW0 SMR:Q58DW0 STRING:Q58DW0 PRIDE:Q58DW0
Ensembl:ENSBTAT00000006866 GeneID:510547 KEGG:bta:510547 CTD:6124
HOVERGEN:HBG001453 InParanoid:Q58DW0 OrthoDB:EOG483D4X
NextBio:20869503 Uniprot:Q58DW0
Length = 422
Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 105/155 (67%), Positives = 121/155 (78%)
Query: 3 AAARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKA 62
A ARPLI+V S +G+ + V LP V KA IRPDIV FVH+N+ KN+RQPYAVS A
Sbjct: 2 ACARPLISVYSEKGE---SSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 58
Query: 63 GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
GHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++N
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 123 QKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLV 157
QKRY P+LVM++GH+IE VPE+PLV
Sbjct: 119 QKRYAICSALAASALPALVMSKGHRIEEVPELPLV 153
>UNIPROTKB|E2R546 [details] [associations]
symbol:RPL4 "60S ribosomal protein L4" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR002136
InterPro:IPR023574 Pfam:PF00573 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.40.1370.10 SUPFAM:SSF52166
InterPro:IPR025755 InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
GeneTree:ENSGT00390000018145 EMBL:AAEX03016228
Ensembl:ENSCAFT00000008039 Uniprot:E2R546
Length = 412
Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 105/155 (67%), Positives = 121/155 (78%)
Query: 3 AAARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKA 62
A ARPLI+V S +G+ + V LP V KA IRPDIV FVH+N+ KN+RQPYAVS A
Sbjct: 2 ACARPLISVYSEKGE---SSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 58
Query: 63 GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
GHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++N
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 123 QKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLV 157
QKRY P+LVM++GH+IE VPE+PLV
Sbjct: 119 QKRYAICSALAASALPALVMSKGHRIEEVPELPLV 153
>UNIPROTKB|F1PVZ2 [details] [associations]
symbol:RPL4 "60S ribosomal protein L4" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR002136
InterPro:IPR023574 Pfam:PF00573 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.40.1370.10 SUPFAM:SSF52166 OMA:HTNMRKN
InterPro:IPR025755 InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
GeneTree:ENSGT00390000018145 EMBL:AAEX03016228
ProteinModelPortal:F1PVZ2 Ensembl:ENSCAFT00000027421 Uniprot:F1PVZ2
Length = 422
Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 105/155 (67%), Positives = 121/155 (78%)
Query: 3 AAARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKA 62
A ARPLI+V S +G+ + V LP V KA IRPDIV FVH+N+ KN+RQPYAVS A
Sbjct: 2 ACARPLISVYSEKGE---SSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 58
Query: 63 GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
GHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++N
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 123 QKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLV 157
QKRY P+LVM++GH+IE VPE+PLV
Sbjct: 119 QKRYAICSALAASALPALVMSKGHRIEEVPELPLV 153
>UNIPROTKB|J9JHV8 [details] [associations]
symbol:RPL4 "60S ribosomal protein L4" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR002136
InterPro:IPR023574 Pfam:PF00573 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.40.1370.10 SUPFAM:SSF52166
InterPro:IPR025755 InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
GeneTree:ENSGT00390000018145 OMA:HRRVNIT EMBL:AAEX03015186
RefSeq:XP_003640018.1 Ensembl:ENSCAFT00000018127 GeneID:100856765
KEGG:cfa:100856765 Uniprot:J9JHV8
Length = 422
Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 105/155 (67%), Positives = 121/155 (78%)
Query: 3 AAARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKA 62
A ARPLI+V S +G+ + V LP V KA IRPDIV FVH+N+ KN+RQPYAVS A
Sbjct: 2 ACARPLISVYSEKGE---SSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 58
Query: 63 GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
GHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++N
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 123 QKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLV 157
QKRY P+LVM++GH+IE VPE+PLV
Sbjct: 119 QKRYAICSALAASALPALVMSKGHRIEEVPELPLV 153
>UNIPROTKB|P36578 [details] [associations]
symbol:RPL4 "60S ribosomal protein L4" species:9606 "Homo
sapiens" [GO:0006412 "translation" evidence=NAS;TAS] [GO:0003735
"structural constituent of ribosome" evidence=NAS] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IDA] [GO:0003723 "RNA
binding" evidence=TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006413 "translational initiation"
evidence=TAS] [GO:0006414 "translational elongation" evidence=TAS]
[GO:0006415 "translational termination" evidence=TAS] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_17015 InterPro:IPR002136 InterPro:IPR023574
Pfam:PF00573 Reactome:REACT_116125 GO:GO:0005730 GO:GO:0000184
GO:GO:0006413 GO:GO:0003723 GO:GO:0003735 EMBL:CH471082
GO:GO:0006415 GO:GO:0006414 Reactome:REACT_1762 GO:GO:0006614
GO:GO:0022625 GO:GO:0019083 eggNOG:COG0088 Gene3D:3.40.1370.10
SUPFAM:SSF52166 KO:K02930 OMA:HTNMRKN InterPro:IPR025755
InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939 CTD:6124
HOVERGEN:HBG001453 OrthoDB:EOG483D4X ChiTaRS:RPL4 EMBL:L20868
EMBL:D23660 EMBL:AB061820 EMBL:AK291117 EMBL:AK291859 EMBL:BC001365
EMBL:BC005817 EMBL:BC007748 EMBL:BC007996 EMBL:BC009888
EMBL:BC010151 EMBL:BC014653 EMBL:BC066925 EMBL:BC095427
IPI:IPI00003918 PIR:T09551 RefSeq:NP_000959.2 UniGene:Hs.186350
UniGene:Hs.644628 ProteinModelPortal:P36578 SMR:P36578
DIP:DIP-27559N IntAct:P36578 MINT:MINT-1034893 STRING:P36578
PhosphoSite:P36578 DMDM:22002063 SWISS-2DPAGE:P36578 PaxDb:P36578
PRIDE:P36578 DNASU:6124 Ensembl:ENST00000307961 GeneID:6124
KEGG:hsa:6124 UCSC:uc002apv.3 GeneCards:GC15M066790 HGNC:HGNC:10353
HPA:HPA034600 MIM:180479 neXtProt:NX_P36578 PharmGKB:PA34749
InParanoid:P36578 PhylomeDB:P36578 GenomeRNAi:6124 NextBio:23787
PMAP-CutDB:P36578 ArrayExpress:P36578 Bgee:P36578 CleanEx:HS_RPL4
Genevestigator:P36578 GermOnline:ENSG00000174444 Uniprot:P36578
Length = 427
Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 105/155 (67%), Positives = 121/155 (78%)
Query: 3 AAARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKA 62
A ARPLI+V S +G+ + V LP V KA IRPDIV FVH+N+ KN+RQPYAVS A
Sbjct: 2 ACARPLISVYSEKGE---SSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 58
Query: 63 GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
GHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++N
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 123 QKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLV 157
QKRY P+LVM++GH+IE VPE+PLV
Sbjct: 119 QKRYAICSALAASALPALVMSKGHRIEEVPELPLV 153
>UNIPROTKB|F1SJJ5 [details] [associations]
symbol:RPL4 "60S ribosomal protein L4" species:9823 "Sus
scrofa" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002136 InterPro:IPR023574
Pfam:PF00573 GO:GO:0005730 GO:GO:0006412 GO:GO:0003735
GO:GO:0022625 Gene3D:3.40.1370.10 SUPFAM:SSF52166 OMA:HTNMRKN
InterPro:IPR025755 InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
GeneTree:ENSGT00390000018145 EMBL:CU407297
Ensembl:ENSSSCT00000005457 Uniprot:F1SJJ5
Length = 426
Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 105/155 (67%), Positives = 121/155 (78%)
Query: 3 AAARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKA 62
A ARPLI+V S +G+ + V LP V KA IRPDIV FVH+N+ KN+RQPYAVS A
Sbjct: 2 ACARPLISVYSEKGE---SSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 58
Query: 63 GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
GHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++N
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 123 QKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLV 157
QKRY P+LVM++GH+IE VPE+PLV
Sbjct: 119 QKRYAICSALAASALPALVMSKGHRIEEVPELPLV 153
>MGI|MGI:1915141 [details] [associations]
symbol:Rpl4 "ribosomal protein L4" species:10090 "Mus
musculus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0015934 "large ribosomal subunit" evidence=ISO]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=ISO]
[GO:0030529 "ribonucleoprotein complex" evidence=ISO]
InterPro:IPR002136 InterPro:IPR023574 Pfam:PF00573 MGI:MGI:1915141
GO:GO:0005730 GO:GO:0006412 GO:GO:0003735 GO:GO:0030529
GO:GO:0022625 eggNOG:COG0088 Gene3D:3.40.1370.10 SUPFAM:SSF52166
HOGENOM:HOG000107331 KO:K02930 OMA:HTNMRKN InterPro:IPR025755
InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
GeneTree:ENSGT00390000018145 CTD:6124 HOVERGEN:HBG001453
OrthoDB:EOG483D4X ChiTaRS:RPL4 EMBL:AK008098 EMBL:AK011068
EMBL:BC003459 IPI:IPI00111412 RefSeq:NP_077174.1 UniGene:Mm.280083
ProteinModelPortal:Q9D8E6 SMR:Q9D8E6 IntAct:Q9D8E6
MINT:MINT-1859608 STRING:Q9D8E6 PhosphoSite:Q9D8E6 PaxDb:Q9D8E6
PRIDE:Q9D8E6 Ensembl:ENSMUST00000034966 GeneID:67891 KEGG:mmu:67891
InParanoid:Q9D8E6 NextBio:325862 Bgee:Q9D8E6 CleanEx:MM_RPL4
Genevestigator:Q9D8E6 GermOnline:ENSMUSG00000032399 Uniprot:Q9D8E6
Length = 419
Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 105/155 (67%), Positives = 121/155 (78%)
Query: 3 AAARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKA 62
A ARPLI+V S +G+ + V LP V KA IRPDIV FVH+N+ KN+RQPYAVS A
Sbjct: 2 ACARPLISVYSEKGE---SSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 58
Query: 63 GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
GHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++N
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 123 QKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLV 157
QKRY P+LVM++GH+IE VPE+PLV
Sbjct: 119 QKRYAICSALAASALPALVMSKGHRIEEVPELPLV 153
>UNIPROTKB|Q6P3V9 [details] [associations]
symbol:Rpl4 "Ribosomal protein L4" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR002136 InterPro:IPR023574 Pfam:PF00573 RGD:619824
GO:GO:0005730 GO:GO:0006412 GO:GO:0003735 EMBL:CH473975
GO:GO:0022625 Gene3D:3.40.1370.10 SUPFAM:SSF52166
InterPro:IPR025755 InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
GeneTree:ENSGT00390000018145 HOVERGEN:HBG001453 IPI:IPI00202512
UniGene:Rn.1133 EMBL:BC063811 EMBL:BC081801 SMR:Q6P3V9
STRING:Q6P3V9 Ensembl:ENSRNOT00000013461 InParanoid:Q6P3V9
Genevestigator:Q6P3V9 Uniprot:Q6P3V9
Length = 421
Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
Identities = 104/155 (67%), Positives = 121/155 (78%)
Query: 3 AAARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKA 62
A ARPLI+V S +G+ + V LP V KA IRPDIV FVH+N+ KN+RQPYAVS A
Sbjct: 2 ACARPLISVYSEKGE---SSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 58
Query: 63 GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
GHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++N
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 123 QKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLV 157
QKRY P+LVM++GH++E VPE+PLV
Sbjct: 119 QKRYAICSALAASALPALVMSKGHRVEEVPELPLV 153
>UNIPROTKB|Q28346 [details] [associations]
symbol:RPL4 "60S ribosomal protein L4" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002136 InterPro:IPR023574
Pfam:PF00573 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
eggNOG:COG0088 Gene3D:3.40.1370.10 SUPFAM:SSF52166 PDB:2ZKR
PDBsum:2ZKR HOGENOM:HOG000107331 InterPro:IPR025755
InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939 HOVERGEN:HBG001453
EMBL:X99909 ProteinModelPortal:Q28346 SMR:Q28346 STRING:Q28346
PRIDE:Q28346 InParanoid:Q28346 EvolutionaryTrace:Q28346
Uniprot:Q28346
Length = 421
Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
Identities = 105/155 (67%), Positives = 121/155 (78%)
Query: 3 AAARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKA 62
A ARPLI+V S +G+ + V LP V KA IRPDIV FVH+N+ KN+RQPYAVS A
Sbjct: 2 ACARPLISVYSEKGE---SSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 58
Query: 63 GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
GHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++N
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 123 QKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLV 157
QKRY P+LVM++GH+IE VPE+PLV
Sbjct: 119 QKRYAICSALACLSLPALVMSKGHRIEEVPELPLV 153
>RGD|619824 [details] [associations]
symbol:Rpl4 "ribosomal protein L4" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0015934 "large ribosomal subunit" evidence=IDA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISO] [GO:0030529
"ribonucleoprotein complex" evidence=ISO] InterPro:IPR002136
InterPro:IPR023574 Pfam:PF00573 RGD:619824 GO:GO:0005730
GO:GO:0006412 GO:GO:0003735 GO:GO:0015934 GO:GO:0022625
eggNOG:COG0088 Gene3D:3.40.1370.10 SUPFAM:SSF52166
HOGENOM:HOG000107331 KO:K02930 InterPro:IPR025755
InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939 CTD:6124
HOVERGEN:HBG001453 OrthoDB:EOG483D4X EMBL:X82180 IPI:IPI00202512
PIR:JC4277 RefSeq:NP_071955.1 UniGene:Rn.1133
ProteinModelPortal:P50878 SMR:P50878 IntAct:P50878 STRING:P50878
PhosphoSite:P50878 PRIDE:P50878 GeneID:64302 KEGG:rno:64302
UCSC:RGD:619824 InParanoid:P50878 NextBio:612934
ArrayExpress:P50878 Genevestigator:P50878
GermOnline:ENSRNOG00000009378 Uniprot:P50878
Length = 421
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 104/155 (67%), Positives = 120/155 (77%)
Query: 3 AAARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKA 62
A ARPLI+V S +G+ + V LP V KA IRPDIV FVH+N+ KN+RQPYAVS A
Sbjct: 2 ACARPLISVYSEKGE---SSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 58
Query: 63 GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
GHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++N
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 123 QKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLV 157
QKRY P+LVM++GH +E VPE+PLV
Sbjct: 119 QKRYAICSALAASALPALVMSKGHCVEEVPELPLV 153
>UNIPROTKB|G3MXR5 [details] [associations]
symbol:G3MXR5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR002136 InterPro:IPR023574
Pfam:PF00573 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:3.40.1370.10 SUPFAM:SSF52166 InterPro:IPR025755 Pfam:PF14374
GeneTree:ENSGT00390000018145 EMBL:DAAA02048433
Ensembl:ENSBTAT00000000730 OMA:YAICSEL Uniprot:G3MXR5
Length = 436
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 101/155 (65%), Positives = 118/155 (76%)
Query: 3 AAARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKA 62
A ARPLI+V S +G+ + V LP V KA IRPDIV FVH+N+ KN+RQPYAVS A
Sbjct: 16 ACARPLISVYSKKGE---SSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 72
Query: 63 GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
GHQTSAESWGTGRAV+RIPRV GG TH +GQGAFGNMCRGGRMFAPTK W+RWH ++N
Sbjct: 73 GHQTSAESWGTGRAVARIPRVRGGRTHHSGQGAFGNMCRGGRMFAPTKTWQRWHHRVNTT 132
Query: 123 QKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLV 157
QKRY P+LVM++GH+IE VPE+PLV
Sbjct: 133 QKRYAICSELAASALPALVMSKGHRIEEVPELPLV 167
>POMBASE|SPBP8B7.03c [details] [associations]
symbol:rpl402 "60S ribosomal protein L4 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0006412 "translation" evidence=ISO]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=ISO]
InterPro:IPR002136 InterPro:IPR023574 Pfam:PF00573
PomBase:SPBP8B7.03c EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0003735 GO:GO:0002181 GO:GO:0022625 Gene3D:3.40.1370.10
SUPFAM:SSF52166 HOGENOM:HOG000107331 KO:K02930 OMA:HTNMRKN
InterPro:IPR025755 InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
EMBL:X73146 PIR:S41640 PIR:T40797 RefSeq:NP_596510.1
ProteinModelPortal:P35679 SMR:P35679 IntAct:P35679 STRING:P35679
PRIDE:P35679 EnsemblFungi:SPBP8B7.03c.1 GeneID:2541344
KEGG:spo:SPBP8B7.03c OrthoDB:EOG4GF6PS NextBio:20802453
Uniprot:P35679
Length = 363
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 98/155 (63%), Positives = 120/155 (77%)
Query: 3 AAARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKA 62
AAARP +++ S +G ++ S T+ LP V KA IRPD+V VH+ ++KN RQPYAVS KA
Sbjct: 2 AAARPTVSIYSKDGSVS---SETIALPFVFKAPIRPDLVRSVHTAVAKNKRQPYAVSEKA 58
Query: 63 GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
GHQTSAESWGTGRA++RIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH K+N N
Sbjct: 59 GHQTSAESWGTGRALARIPRVGGGGTHRSGQAAFGNMCRSGRMFAPTKTWRKWHVKVNQN 118
Query: 123 QKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLV 157
+KRY PSL++ARGH+IE +PE+PLV
Sbjct: 119 EKRYAISSAVAASGVPSLLLARGHRIEEIPEVPLV 153
>UNIPROTKB|J9P0P0 [details] [associations]
symbol:J9P0P0 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR002136
InterPro:IPR023574 Pfam:PF00573 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:3.40.1370.10 SUPFAM:SSF52166
InterPro:IPR025755 InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
GeneTree:ENSGT00390000018145 EMBL:AAEX03014418
Ensembl:ENSCAFT00000016777 OMA:IRENKRA Uniprot:J9P0P0
Length = 422
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 101/155 (65%), Positives = 118/155 (76%)
Query: 3 AAARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKA 62
A ARPLI+V +G+ + V LP V KA IRPDIV FVH+N+ K++RQPYAVS A
Sbjct: 2 ACARPLISVYYEKGE---SSGKNVTLPAVFKAPIRPDIVNFVHTNLRKSNRQPYAVSELA 58
Query: 63 GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
GHQTSAESWGTGRAV+RIPRV G GTHR+GQGAFGNMCRGGRMFAPTK W RWHR++N
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGRGTHRSGQGAFGNMCRGGRMFAPTKTWCRWHRRVNTT 118
Query: 123 QKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLV 157
QKRY P+LVM++GH+IE VPE+PLV
Sbjct: 119 QKRYAICSALAASALPALVMSKGHRIEEVPELPLV 153
>UNIPROTKB|Q6EE59 [details] [associations]
symbol:RPL4 "Ribosomal protein L4" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IEA] InterPro:IPR002136 InterPro:IPR023574
Pfam:PF00573 GO:GO:0005730 GO:GO:0006412 GO:GO:0003735
GO:GO:0022625 Gene3D:3.40.1370.10 SUPFAM:SSF52166
HOGENOM:HOG000107331 InterPro:IPR025755 InterPro:IPR013000
Pfam:PF14374 PROSITE:PS00939 GeneTree:ENSGT00390000018145
HOVERGEN:HBG001453 EMBL:AADN02038915 UniGene:Gga.4523 EMBL:AY389964
IPI:IPI00818526 STRING:Q6EE59 Ensembl:ENSGALT00000038315
InParanoid:Q6EE59 Uniprot:Q6EE59
Length = 280
Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 95/132 (71%), Positives = 109/132 (82%)
Query: 26 VPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTSAESWGTGRAVSRIPRVPG 85
V LP V KA IRPD+V FVH+N+ KN+RQPYAVS AGHQTSAESWGTGRAV+RIPRV G
Sbjct: 4 VTLPAVFKAPIRPDVVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRG 63
Query: 86 GGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARG 145
GGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++NV QKRY P+LVM++G
Sbjct: 64 GGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNVTQKRYAICSALAASALPALVMSKG 123
Query: 146 HKIETVPEMPLV 157
H+IE +PE+PLV
Sbjct: 124 HRIEEIPELPLV 135
>POMBASE|SPBC1711.06 [details] [associations]
symbol:rpl401 "60S ribosomal protein L4 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006412 "translation" evidence=ISO] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO] InterPro:IPR002136
InterPro:IPR023574 Pfam:PF00573 PomBase:SPBC1711.06 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0003735 GO:GO:0002181 GO:GO:0022625
eggNOG:COG0088 Gene3D:3.40.1370.10 SUPFAM:SSF52166
HOGENOM:HOG000107331 KO:K02930 InterPro:IPR025755
InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939 OrthoDB:EOG4GF6PS
RefSeq:NP_595879.1 ProteinModelPortal:Q9P784 SMR:Q9P784
STRING:Q9P784 PRIDE:Q9P784 EnsemblFungi:SPBC1711.06.1
GeneID:2539780 KEGG:spo:SPBC1711.06 OMA:QGARNHP NextBio:20800929
Uniprot:Q9P784
Length = 363
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 97/155 (62%), Positives = 120/155 (77%)
Query: 3 AAARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKA 62
AAARP +++ + +G ++ S T+ LP V KA IRPD+V VH+ ++KN RQPYAVS KA
Sbjct: 2 AAARPTVSIYNKDGSVS---SETLALPFVFKAPIRPDLVRSVHTAVAKNKRQPYAVSEKA 58
Query: 63 GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
GHQTSAESWGTGRA++RIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH K+N N
Sbjct: 59 GHQTSAESWGTGRALARIPRVGGGGTHRSGQAAFGNMCRSGRMFAPTKTWRKWHVKVNQN 118
Query: 123 QKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLV 157
+KRY PSL++ARGH+IE +PE+PLV
Sbjct: 119 EKRYAIASAVAASGVPSLLLARGHRIEEIPEVPLV 153
>ASPGD|ASPL0000011665 [details] [associations]
symbol:AN8176 species:162425 "Emericella nidulans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR002136 InterPro:IPR023574 Pfam:PF00573
GO:GO:0006412 GO:GO:0005840 EMBL:BN001302 GO:GO:0003735
EMBL:AACD01000141 eggNOG:COG0088 Gene3D:3.40.1370.10
SUPFAM:SSF52166 HOGENOM:HOG000107331 KO:K02930 OMA:HTNMRKN
InterPro:IPR025755 InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
OrthoDB:EOG4GF6PS RefSeq:XP_681445.1 ProteinModelPortal:Q5AU54
SMR:Q5AU54 STRING:Q5AU54 EnsemblFungi:CADANIAT00004216
GeneID:2869238 KEGG:ani:AN8176.2 Uniprot:Q5AU54
Length = 372
Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 94/154 (61%), Positives = 114/154 (74%)
Query: 4 AARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAG 63
A+RP +++ S EG +T PLP V + IRPDIV VH+ ++KN RQPYAVS KAG
Sbjct: 2 ASRPTVSIASGEGK---PTGATCPLPAVFNSPIRPDIVQQVHTGMAKNKRQPYAVSEKAG 58
Query: 64 HQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQ 123
QTSAESWGTGRAV+RIPRV GGGTHRAGQ AFGN CR GRMFAPTK+WR+WH+K+N+ Q
Sbjct: 59 EQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNQCRSGRMFAPTKVWRKWHQKVNLGQ 118
Query: 124 KRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLV 157
+R+ PSL+ ARGH+I VPE+PLV
Sbjct: 119 RRFATASALAASSVPSLLFARGHRIANVPEVPLV 152
>SGD|S000000235 [details] [associations]
symbol:RPL4A "Ribosomal 60S subunit protein L4A" species:4932
"Saccharomyces cerevisiae" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA;TAS]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=TAS] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0002181 "cytoplasmic
translation" evidence=TAS] InterPro:IPR002136 InterPro:IPR023574
Pfam:PF00573 SGD:S000000235 EMBL:BK006936 GO:GO:0003723
GO:GO:0003735 GO:GO:0002181 PDB:4B6A PDBsum:4B6A EMBL:X76078
GO:GO:0022625 Gene3D:3.40.1370.10 SUPFAM:SSF52166 PDB:1K5Y PDB:3IZS
PDB:3O58 PDB:3O5H PDB:3U5E PDB:3U5I PDBsum:1K5Y PDBsum:3IZS
PDBsum:3O58 PDBsum:3O5H PDBsum:3U5E PDBsum:3U5I
HOGENOM:HOG000107331 KO:K02930 OMA:HTNMRKN InterPro:IPR025755
InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939 OrthoDB:EOG4GF6PS
EMBL:J03195 EMBL:Z35900 PIR:S45887 RefSeq:NP_009587.1
ProteinModelPortal:P10664 SMR:P10664 IntAct:P10664
MINT:MINT-1325639 STRING:P10664 PeptideAtlas:P10664 PRIDE:P10664
EnsemblFungi:YBR031W GeneID:852319 KEGG:sce:YBR031W
GeneTree:ENSGT00390000018145 NextBio:971014 Genevestigator:P10664
GermOnline:YBR031W Uniprot:P10664
Length = 362
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 96/153 (62%), Positives = 116/153 (75%)
Query: 5 ARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGH 64
+RP +TV SL G+ +A +PLP V A IRPDIV V ++++KN RQ YAVS KAGH
Sbjct: 2 SRPQVTVHSLTGEATANA---LPLPAVFSAPIRPDIVHTVFTSVNKNKRQAYAVSEKAGH 58
Query: 65 QTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQK 124
QTSAESWGTGRAV+RIPRV GGGT R+GQGAFGNMCRGGRMFAPTK WR+W+ K+N N+K
Sbjct: 59 QTSAESWGTGRAVARIPRVGGGGTGRSGQGAFGNMCRGGRMFAPTKTWRKWNVKVNHNEK 118
Query: 125 RYXXXXXXXXXXXPSLVMARGHKIETVPEMPLV 157
RY SLV+ARGH++E +PE+PLV
Sbjct: 119 RYATASAIAATAVASLVLARGHRVEKIPEIPLV 151
>SGD|S000002419 [details] [associations]
symbol:RPL4B "Ribosomal 60S subunit protein L4B" species:4932
"Saccharomyces cerevisiae" [GO:0005840 "ribosome" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA;TAS] [GO:0002181
"cytoplasmic translation" evidence=TAS] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0006412 "translation" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR002136
InterPro:IPR023574 Pfam:PF00573 SGD:S000002419 EMBL:BK006938
GO:GO:0003723 GO:GO:0003735 GO:GO:0002181 EMBL:Z48008 EMBL:X95966
RefSeq:NP_010299.3 GeneID:851579 KEGG:sce:YDR016C KO:K11553
GO:GO:0022625 eggNOG:COG0088 Gene3D:3.40.1370.10 SUPFAM:SSF52166
PDB:1S1I PDBsum:1S1I PDB:2WW9 PDB:2WWA PDBsum:2WW9 PDBsum:2WWA
HOGENOM:HOG000107331 KO:K02930 InterPro:IPR025755
InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939 OrthoDB:EOG4GF6PS
GeneTree:ENSGT00390000018145 OMA:HRRVNIT EMBL:Z74308 EMBL:AY558570
EMBL:M22583 PIR:S50993 RefSeq:NP_010295.3 ProteinModelPortal:P49626
SMR:P49626 DIP:DIP-5367N IntAct:P49626 MINT:MINT-572151
STRING:P49626 PaxDb:P49626 PeptideAtlas:P49626 EnsemblFungi:YDR012W
GeneID:851575 KEGG:sce:YDR012W EvolutionaryTrace:P49626
NextBio:969031 Genevestigator:P49626 GermOnline:YDR012W
Uniprot:P49626
Length = 362
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 96/153 (62%), Positives = 116/153 (75%)
Query: 5 ARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGH 64
+RP +TV SL G+ +A +PLP V A IRPDIV V ++++KN RQ YAVS KAGH
Sbjct: 2 SRPQVTVHSLTGEATANA---LPLPAVFSAPIRPDIVHTVFTSVNKNKRQAYAVSEKAGH 58
Query: 65 QTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQK 124
QTSAESWGTGRAV+RIPRV GGGT R+GQGAFGNMCRGGRMFAPTK WR+W+ K+N N+K
Sbjct: 59 QTSAESWGTGRAVARIPRVGGGGTGRSGQGAFGNMCRGGRMFAPTKTWRKWNVKVNHNEK 118
Query: 125 RYXXXXXXXXXXXPSLVMARGHKIETVPEMPLV 157
RY SLV+ARGH++E +PE+PLV
Sbjct: 119 RYATASAIAATAVASLVLARGHRVEKIPEIPLV 151
>UNIPROTKB|G4MZ86 [details] [associations]
symbol:MGG_08190 "60S ribosomal protein L4-A"
species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR002136 InterPro:IPR023574
Pfam:PF00573 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0043581 EMBL:CM001232 Gene3D:3.40.1370.10 SUPFAM:SSF52166
InterPro:IPR025755 InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
RefSeq:XP_003715166.1 ProteinModelPortal:G4MZ86 SMR:G4MZ86
EnsemblFungi:MGG_08190T0 GeneID:2678306 KEGG:mgr:MGG_08190
Uniprot:G4MZ86
Length = 371
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 93/154 (60%), Positives = 113/154 (73%)
Query: 4 AARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAG 63
A+RP +T+ +G + +T P+P+V A IRPDIV VH ++KN RQPYAVS KAG
Sbjct: 2 ASRPTVTIIGADGKAS---GATHPIPNVFTAPIRPDIVQQVHKGMAKNKRQPYAVSEKAG 58
Query: 64 HQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQ 123
HQTSAESWGTGRAV+RIPRV GGGTHRAGQ AFGNMCR GRMFAPTK+WR+WH K+N Q
Sbjct: 59 HQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWHIKVNQGQ 118
Query: 124 KRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLV 157
KR+ L++ARGH+I +PE+PLV
Sbjct: 119 KRFATTSALAASAVAPLLLARGHRISNIPEVPLV 152
>UNIPROTKB|H3BTP7 [details] [associations]
symbol:RPL4 "60S ribosomal protein L4" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR002136 InterPro:IPR023574
Pfam:PF00573 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:3.40.1370.10 SUPFAM:SSF52166 ChiTaRS:RPL4 HGNC:HGNC:10353
EMBL:AC116913 Ensembl:ENST00000569438 Bgee:H3BTP7 Uniprot:H3BTP7
Length = 170
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 97/148 (65%), Positives = 112/148 (75%)
Query: 3 AAARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKA 62
A ARPLI+V S +G+ + V LP V KA IRPDIV FVH+N+ KN+RQPYAVS A
Sbjct: 2 ACARPLISVYSEKGE---SSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 58
Query: 63 GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
GHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++N
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 123 QKRYXXXXXXXXXXXPSLVMARGH-KIE 149
QKRY P+LVM++ K+E
Sbjct: 119 QKRYAICSALAASALPALVMSKVEDKVE 146
>FB|FBgn0003279 [details] [associations]
symbol:RpL4 "Ribosomal protein L4" species:7227 "Drosophila
melanogaster" [GO:0003735 "structural constituent of ribosome"
evidence=ISS;IDA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISS] [GO:0006412 "translation" evidence=ISS] [GO:0005811
"lipid particle" evidence=IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0051298 "centrosome duplication" evidence=IMP]
InterPro:IPR002136 InterPro:IPR023574 Pfam:PF00573 EMBL:AE014297
GO:GO:0051298 GO:GO:0005811 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 eggNOG:COG0088 Gene3D:3.40.1370.10 SUPFAM:SSF52166
KO:K02930 OMA:HTNMRKN InterPro:IPR025755 InterPro:IPR013000
Pfam:PF14374 PROSITE:PS00939 GeneTree:ENSGT00390000018145 CTD:6124
EMBL:X13382 EMBL:AY069485 EMBL:X06881 PIR:S02209 RefSeq:NP_524538.2
UniGene:Dm.2104 ProteinModelPortal:P09180 SMR:P09180 IntAct:P09180
MINT:MINT-844904 STRING:P09180 PaxDb:P09180 PRIDE:P09180
EnsemblMetazoa:FBtr0085248 GeneID:43349 KEGG:dme:Dmel_CG5502
FlyBase:FBgn0003279 InParanoid:P09180 OrthoDB:EOG4280H6
PhylomeDB:P09180 ChiTaRS:RPL4 GenomeRNAi:43349 NextBio:833481
Bgee:P09180 GermOnline:CG5502 Uniprot:P09180
Length = 401
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 95/153 (62%), Positives = 115/153 (75%)
Query: 5 ARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGH 64
ARPL++V + + + A D + + LP V KA IRPD+V VH + +N+RQ YAVS AGH
Sbjct: 6 ARPLVSVYTEKNEPAKDKN--ICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGH 63
Query: 65 QTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQK 124
QTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK +RRWHRK+NVNQ+
Sbjct: 64 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQR 123
Query: 125 RYXXXXXXXXXXXPSLVMARGHKIETVPEMPLV 157
RY P+LV ++GH I+ V E PLV
Sbjct: 124 RYALVSAIAASGVPALVQSKGHVIDGVSEFPLV 156
>CGD|CAL0003773 [details] [associations]
symbol:RPL4B species:5476 "Candida albicans" [GO:0009986
"cell surface" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IEA] InterPro:IPR002136
InterPro:IPR023574 Pfam:PF00573 CGD:CAL0003773 GO:GO:0009986
GO:GO:0016020 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:AACQ01000092 eggNOG:COG0088 Gene3D:3.40.1370.10
SUPFAM:SSF52166 HOGENOM:HOG000107331 KO:K02930 InterPro:IPR025755
InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939 RefSeq:XP_715018.1
ProteinModelPortal:Q59ZX4 SMR:Q59ZX4 STRING:Q59ZX4 GeneID:3643347
KEGG:cal:CaO19.7217 Uniprot:Q59ZX4
Length = 363
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 92/154 (59%), Positives = 114/154 (74%)
Query: 4 AARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAG 63
++RP ++V S++G+ SS +PLP V A +RPD+V V ++KN RQ YAV+ AG
Sbjct: 2 SSRPQVSVISVKGEQG---SSQLPLPAVFAAPVRPDLVHSVFVRVNKNKRQAYAVAENAG 58
Query: 64 HQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQ 123
HQTSAESWGTGRAV+RIPRV GGGTHR+GQ AFGNMCRGGRMFAPTK WRRW+ K+N N+
Sbjct: 59 HQTSAESWGTGRAVARIPRVGGGGTHRSGQAAFGNMCRGGRMFAPTKTWRRWNVKVNHNE 118
Query: 124 KRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLV 157
KRY SLV+ARGH++E V E+PLV
Sbjct: 119 KRYATASAIAASAVTSLVLARGHRVEQVKELPLV 152
>UNIPROTKB|Q59ZX4 [details] [associations]
symbol:RPL4B "Likely cytosolic ribosomal protein L4"
species:237561 "Candida albicans SC5314" [GO:0009986 "cell surface"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
InterPro:IPR002136 InterPro:IPR023574 Pfam:PF00573 CGD:CAL0003773
GO:GO:0009986 GO:GO:0016020 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:AACQ01000092 eggNOG:COG0088 Gene3D:3.40.1370.10
SUPFAM:SSF52166 HOGENOM:HOG000107331 KO:K02930 InterPro:IPR025755
InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939 RefSeq:XP_715018.1
ProteinModelPortal:Q59ZX4 SMR:Q59ZX4 STRING:Q59ZX4 GeneID:3643347
KEGG:cal:CaO19.7217 Uniprot:Q59ZX4
Length = 363
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 92/154 (59%), Positives = 114/154 (74%)
Query: 4 AARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAG 63
++RP ++V S++G+ SS +PLP V A +RPD+V V ++KN RQ YAV+ AG
Sbjct: 2 SSRPQVSVISVKGEQG---SSQLPLPAVFAAPVRPDLVHSVFVRVNKNKRQAYAVAENAG 58
Query: 64 HQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQ 123
HQTSAESWGTGRAV+RIPRV GGGTHR+GQ AFGNMCRGGRMFAPTK WRRW+ K+N N+
Sbjct: 59 HQTSAESWGTGRAVARIPRVGGGGTHRSGQAAFGNMCRGGRMFAPTKTWRRWNVKVNHNE 118
Query: 124 KRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLV 157
KRY SLV+ARGH++E V E+PLV
Sbjct: 119 KRYATASAIAASAVTSLVLARGHRVEQVKELPLV 152
>DICTYBASE|DDB_G0277803 [details] [associations]
symbol:rpl4 "60S ribosomal protein L4" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR002136 InterPro:IPR023574 Pfam:PF00573
dictyBase:DDB_G0277803 GO:GO:0005615 GO:GO:0006412
GenomeReviews:CM000151_GR GO:GO:0005840 GO:GO:0003735
EMBL:AAFI02000022 eggNOG:COG0088 Gene3D:3.40.1370.10
SUPFAM:SSF52166 HSSP:P49626 KO:K02930 OMA:HTNMRKN
InterPro:IPR025755 InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
RefSeq:XP_642484.1 ProteinModelPortal:Q54Z69 SMR:Q54Z69
STRING:Q54Z69 PRIDE:Q54Z69 EnsemblProtists:DDB0231241
GeneID:8621195 KEGG:ddi:DDB_G0277803 ProtClustDB:PTZ00428
Uniprot:Q54Z69
Length = 369
Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 86/132 (65%), Positives = 103/132 (78%)
Query: 26 VPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTSAESWGTGRAVSRIPRVPG 85
V LP+V+ IRPD+V FVH+N++KN+RQ Y + AG QTSAESWGTGRAV+RIPRVPG
Sbjct: 20 VKLPNVLTTPIRPDLVNFVHTNLNKNARQAYGAAPYAGEQTSAESWGTGRAVARIPRVPG 79
Query: 86 GGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARG 145
GTHR+GQGAFGNMCRGGRM+ P K WRRW+RK+NVNQKRY P+LVMARG
Sbjct: 80 SGTHRSGQGAFGNMCRGGRMYGPNKTWRRWNRKVNVNQKRYAVVSALAASAVPALVMARG 139
Query: 146 HKIETVPEMPLV 157
H+I + E+PLV
Sbjct: 140 HRINGINEVPLV 151
>WB|WBGene00004415 [details] [associations]
symbol:rpl-4 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0032502 "developmental process" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] InterPro:IPR002136
InterPro:IPR023574 Pfam:PF00573 GO:GO:0008340 GO:GO:0009792
GO:GO:0006915 GO:GO:0006412 GO:GO:0000003 GO:GO:0005840
GO:GO:0003735 EMBL:FO080106 eggNOG:COG0088 Gene3D:3.40.1370.10
SUPFAM:SSF52166 HOGENOM:HOG000107331 KO:K02930 OMA:HTNMRKN
InterPro:IPR025755 InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
GeneTree:ENSGT00390000018145 PIR:T34031 RefSeq:NP_491416.1
ProteinModelPortal:O02056 SMR:O02056 DIP:DIP-26846N IntAct:O02056
MINT:MINT-1087026 STRING:O02056 PaxDb:O02056 PRIDE:O02056
EnsemblMetazoa:B0041.4.1 EnsemblMetazoa:B0041.4.2 GeneID:172074
KEGG:cel:CELE_B0041.4 UCSC:B0041.4.1 CTD:172074 WormBase:B0041.4
InParanoid:O02056 NextBio:873907 Uniprot:O02056
Length = 345
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 90/154 (58%), Positives = 109/154 (70%)
Query: 4 AARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAG 63
AARPL+TV E AT S + LP V + IRPD+V F+ + +N RQ +AV+ KAG
Sbjct: 2 AARPLVTVYD-EKYEATQ--SQIRLPAVFRTPIRPDLVSFIADQVRRNRRQAHAVNTKAG 58
Query: 64 HQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQ 123
Q SAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGG MFAP K++RRWHR +N+ Q
Sbjct: 59 KQHSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGHMFAPLKVFRRWHRNVNIAQ 118
Query: 124 KRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLV 157
KRY P+L+ ARGH I+ V E+PLV
Sbjct: 119 KRYAVSSAIAASGIPALLQARGHVIDQVAEVPLV 152
>GENEDB_PFALCIPARUM|PFE0350c [details] [associations]
symbol:PFE0350c "60S ribosomal subunit protein
L4/L1, putative" species:5833 "Plasmodium falciparum" [GO:0015934
"large ribosomal subunit" evidence=ISS] [GO:0003723 "RNA binding"
evidence=ISS] InterPro:IPR002136 InterPro:IPR023574 Pfam:PF00573
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 EMBL:AL844504
GO:GO:0015934 Gene3D:3.40.1370.10 SUPFAM:SSF52166
HOGENOM:HOG000107331 KO:K02930 OMA:HTNMRKN InterPro:IPR025755
Pfam:PF14374 ProtClustDB:PTZ00428 RefSeq:XP_001351629.1
ProteinModelPortal:Q8I431 SMR:Q8I431 IntAct:Q8I431
MINT:MINT-1588049 PRIDE:Q8I431 EnsemblProtists:PFE0350c:mRNA
GeneID:812881 KEGG:pfa:PFE0350c EuPathDB:PlasmoDB:PF3D7_0507100
Uniprot:Q8I431
Length = 411
Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 89/155 (57%), Positives = 108/155 (69%)
Query: 3 AAARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKA 62
A RP+ V S G + V +P V + IR D++ V++N+SKN R PYAV A
Sbjct: 2 ATIRPVANVYSTNGK---NVVGEVEIPVVFQTPIRNDLIQSVYTNMSKNRRHPYAVKLGA 58
Query: 63 GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
G++TSAESWGTGRAV+RIPRVPGGGTHRAGQGAFGNMCRGG MF PTKIWRRW RK+N+
Sbjct: 59 GYETSAESWGTGRAVARIPRVPGGGTHRAGQGAFGNMCRGGGMFNPTKIWRRWGRKVNLK 118
Query: 123 QKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLV 157
+KRY SLV+ARGH+I + E+PLV
Sbjct: 119 EKRYAVCSSIAASGVTSLVLARGHRISHLKEVPLV 153
>UNIPROTKB|Q8I431 [details] [associations]
symbol:PFE0350c "60S ribosomal protein L4, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR002136 InterPro:IPR023574 Pfam:PF00573 GO:GO:0006412
GO:GO:0003723 GO:GO:0003735 EMBL:AL844504 GO:GO:0015934
Gene3D:3.40.1370.10 SUPFAM:SSF52166 HOGENOM:HOG000107331 KO:K02930
OMA:HTNMRKN InterPro:IPR025755 Pfam:PF14374 ProtClustDB:PTZ00428
RefSeq:XP_001351629.1 ProteinModelPortal:Q8I431 SMR:Q8I431
IntAct:Q8I431 MINT:MINT-1588049 PRIDE:Q8I431
EnsemblProtists:PFE0350c:mRNA GeneID:812881 KEGG:pfa:PFE0350c
EuPathDB:PlasmoDB:PF3D7_0507100 Uniprot:Q8I431
Length = 411
Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 89/155 (57%), Positives = 108/155 (69%)
Query: 3 AAARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKA 62
A RP+ V S G + V +P V + IR D++ V++N+SKN R PYAV A
Sbjct: 2 ATIRPVANVYSTNGK---NVVGEVEIPVVFQTPIRNDLIQSVYTNMSKNRRHPYAVKLGA 58
Query: 63 GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
G++TSAESWGTGRAV+RIPRVPGGGTHRAGQGAFGNMCRGG MF PTKIWRRW RK+N+
Sbjct: 59 GYETSAESWGTGRAVARIPRVPGGGTHRAGQGAFGNMCRGGGMFNPTKIWRRWGRKVNLK 118
Query: 123 QKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLV 157
+KRY SLV+ARGH+I + E+PLV
Sbjct: 119 EKRYAVCSSIAASGVTSLVLARGHRISHLKEVPLV 153
>UNIPROTKB|H3BU31 [details] [associations]
symbol:RPL4 "60S ribosomal protein L4" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR002136 InterPro:IPR023574
Pfam:PF00573 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:3.40.1370.10 SUPFAM:SSF52166 InterPro:IPR025755 Pfam:PF14374
ChiTaRS:RPL4 HGNC:HGNC:10353 EMBL:AC116913 Ensembl:ENST00000569696
Bgee:H3BU31 Uniprot:H3BU31
Length = 171
Score = 459 (166.6 bits), Expect = 1.7e-43, P = 1.7e-43
Identities = 87/118 (73%), Positives = 97/118 (82%)
Query: 3 AAARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKA 62
A ARPLI+V S +G+ + V LP V KA IRPDIV FVH+N+ KN+RQPYAVS A
Sbjct: 2 ACARPLISVYSEKGE---SSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 58
Query: 63 GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120
GHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR+ N
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRKN 116
>UNIPROTKB|H3BM89 [details] [associations]
symbol:RPL4 "Ribosomal protein L4, isoform CRA_a"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] InterPro:IPR002136
InterPro:IPR023574 Pfam:PF00573 GO:GO:0006412 GO:GO:0003735
EMBL:CH471082 GO:GO:0015934 Gene3D:3.40.1370.10 SUPFAM:SSF52166
InterPro:IPR025755 InterPro:IPR013000 Pfam:PF14374 PROSITE:PS00939
ChiTaRS:RPL4 UniGene:Hs.186350 UniGene:Hs.644628 HGNC:HGNC:10353
EMBL:AC116913 SMR:H3BM89 Ensembl:ENST00000568588 Uniprot:H3BM89
Length = 333
Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 37/59 (62%), Positives = 44/59 (74%)
Query: 99 MCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLV 157
MCRGGRMFAPTK WRRWHR++N QKRY P+LVM++GH+IE VPE+PLV
Sbjct: 1 MCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLV 59
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.132 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 157 146 0.00079 103 3 11 22 0.45 31
30 0.49 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 33
No. of states in DFA: 577 (61 KB)
Total size of DFA: 138 KB (2085 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.06u 0.17s 14.23t Elapsed: 00:00:00
Total cpu time: 14.07u 0.17s 14.24t Elapsed: 00:00:00
Start: Fri May 10 07:30:56 2013 End: Fri May 10 07:30:56 2013