BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048058
(157 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SF40|RL4A_ARATH 60S ribosomal protein L4-1 OS=Arabidopsis thaliana GN=RPL4A PE=2
SV=1
Length = 406
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 133/156 (85%), Positives = 146/156 (93%)
Query: 2 AAAARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRK 61
AAAARPL+T+Q+L+GDM+TD SSTV LPDVM A +RPDIV FVH+ IS NSRQPYAVS+K
Sbjct: 3 AAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSKK 62
Query: 62 AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121
AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++NV
Sbjct: 63 AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNV 122
Query: 122 NQKRYAIVSAIAASAVPSLVMARGHKIETVPEMPLV 157
N KR+AIVSAIAA+AVP+LVMARGHKIE VPEMPLV
Sbjct: 123 NMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLV 158
>sp|P49691|RL4B_ARATH 60S ribosomal protein L4-2 OS=Arabidopsis thaliana GN=RPL4D PE=1
SV=2
Length = 407
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 132/156 (84%), Positives = 145/156 (92%)
Query: 2 AAAARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRK 61
+AAARPL+TVQ L+GDM+TD S+TV LPDVM A +RPDIV FVH+ IS NSRQPYAVS+K
Sbjct: 4 SAAARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVSKK 63
Query: 62 AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINV 121
AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++NV
Sbjct: 64 AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRVNV 123
Query: 122 NQKRYAIVSAIAASAVPSLVMARGHKIETVPEMPLV 157
N KR+AIVSAIAA+AVP+LVMARGHKIE VPEMPLV
Sbjct: 124 NMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLV 159
>sp|Q9XF97|RL4_PRUAR 60S ribosomal protein L4 OS=Prunus armeniaca GN=RPL4 PE=2 SV=1
Length = 408
Score = 283 bits (724), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 142/152 (93%), Positives = 148/152 (97%)
Query: 6 RPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQ 65
RPL+TVQSLEGDMATD + TV LPDVMKASIRPDIV FVHSNISKNSRQPYAVS+KAGHQ
Sbjct: 9 RPLVTVQSLEGDMATDQTQTVALPDVMKASIRPDIVTFVHSNISKNSRQPYAVSKKAGHQ 68
Query: 66 TSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKR 125
TSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKR
Sbjct: 69 TSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKR 128
Query: 126 YAIVSAIAASAVPSLVMARGHKIETVPEMPLV 157
YA+VSAIAASAVPSLV+ARGHKIETVPE+PLV
Sbjct: 129 YAVVSAIAASAVPSLVLARGHKIETVPELPLV 160
>sp|Q28346|RL4_CANFA 60S ribosomal protein L4 OS=Canis familiaris GN=RPL4 PE=1 SV=2
Length = 421
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 110/155 (70%), Positives = 129/155 (83%), Gaps = 3/155 (1%)
Query: 3 AAARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKA 62
A ARPLI+V S +G+ + V LP V KA IRPDIV FVH+N+ KN+RQPYAVS A
Sbjct: 2 ACARPLISVYSEKGE---SSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 58
Query: 63 GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
GHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++N
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 123 QKRYAIVSAIAASAVPSLVMARGHKIETVPEMPLV 157
QKRYAI SA+A ++P+LVM++GH+IE VPE+PLV
Sbjct: 119 QKRYAICSALACLSLPALVMSKGHRIEEVPELPLV 153
>sp|P49165|RL4_URECA 60S ribosomal protein L4 OS=Urechis caupo GN=RPL4 PE=2 SV=1
Length = 386
Score = 229 bits (583), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 108/154 (70%), Positives = 127/154 (82%), Gaps = 3/154 (1%)
Query: 4 AARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAG 63
AARPLITV S D + S V LP V +A IRPDIV FVH + KN RQPYAVS+KAG
Sbjct: 2 AARPLITVHS---DKGAASESNVTLPAVFRAPIRPDIVNFVHFELKKNGRQPYAVSQKAG 58
Query: 64 HQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQ 123
HQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRG RMFAPTK WRRWHR++N Q
Sbjct: 59 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGRRMFAPTKTWRRWHRRVNTTQ 118
Query: 124 KRYAIVSAIAASAVPSLVMARGHKIETVPEMPLV 157
+R+A+VSAIAA+ +P++VM++GH IE +PE+PLV
Sbjct: 119 RRHALVSAIAATGIPAVVMSKGHCIEQIPEVPLV 152
>sp|P35679|RL4A_SCHPO 60S ribosomal protein L4-A OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rpl4a PE=1 SV=2
Length = 363
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 106/155 (68%), Positives = 129/155 (83%), Gaps = 3/155 (1%)
Query: 3 AAARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKA 62
AAARP +++ S +G ++ S T+ LP V KA IRPD+V VH+ ++KN RQPYAVS KA
Sbjct: 2 AAARPTVSIYSKDGSVS---SETIALPFVFKAPIRPDLVRSVHTAVAKNKRQPYAVSEKA 58
Query: 63 GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
GHQTSAESWGTGRA++RIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH K+N N
Sbjct: 59 GHQTSAESWGTGRALARIPRVGGGGTHRSGQAAFGNMCRSGRMFAPTKTWRKWHVKVNQN 118
Query: 123 QKRYAIVSAIAASAVPSLVMARGHKIETVPEMPLV 157
+KRYAI SA+AAS VPSL++ARGH+IE +PE+PLV
Sbjct: 119 EKRYAISSAVAASGVPSLLLARGHRIEEIPEVPLV 153
>sp|Q9P784|RL4B_SCHPO 60S ribosomal protein L4-B OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rpl4b PE=3 SV=1
Length = 363
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 105/155 (67%), Positives = 129/155 (83%), Gaps = 3/155 (1%)
Query: 3 AAARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKA 62
AAARP +++ + +G ++ S T+ LP V KA IRPD+V VH+ ++KN RQPYAVS KA
Sbjct: 2 AAARPTVSIYNKDGSVS---SETLALPFVFKAPIRPDLVRSVHTAVAKNKRQPYAVSEKA 58
Query: 63 GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
GHQTSAESWGTGRA++RIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH K+N N
Sbjct: 59 GHQTSAESWGTGRALARIPRVGGGGTHRSGQAAFGNMCRSGRMFAPTKTWRKWHVKVNQN 118
Query: 123 QKRYAIVSAIAASAVPSLVMARGHKIETVPEMPLV 157
+KRYAI SA+AAS VPSL++ARGH+IE +PE+PLV
Sbjct: 119 EKRYAIASAVAASGVPSLLLARGHRIEEIPEVPLV 153
>sp|Q58DW0|RL4_BOVIN 60S ribosomal protein L4 OS=Bos taurus GN=RPL4 PE=2 SV=3
Length = 422
Score = 224 bits (571), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 113/155 (72%), Positives = 131/155 (84%), Gaps = 3/155 (1%)
Query: 3 AAARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKA 62
A ARPLI+V S +G+ + V LP V KA IRPDIV FVH+N+ KN+RQPYAVS A
Sbjct: 2 ACARPLISVYSEKGE---SSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 58
Query: 63 GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
GHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++N
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 123 QKRYAIVSAIAASAVPSLVMARGHKIETVPEMPLV 157
QKRYAI SA+AASA+P+LVM++GH+IE VPE+PLV
Sbjct: 119 QKRYAICSALAASALPALVMSKGHRIEEVPELPLV 153
>sp|Q5RCR3|RL4_PONAB 60S ribosomal protein L4 OS=Pongo abelii GN=RPL4 PE=2 SV=1
Length = 427
Score = 224 bits (571), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 113/155 (72%), Positives = 131/155 (84%), Gaps = 3/155 (1%)
Query: 3 AAARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKA 62
A ARPLI+V S +G+ + V LP V KA IRPDIV FVH+N+ KN+RQPYAVS A
Sbjct: 2 ACARPLISVYSEKGE---SSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 58
Query: 63 GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
GHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++N
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 123 QKRYAIVSAIAASAVPSLVMARGHKIETVPEMPLV 157
QKRYAI SA+AASA+P+LVM++GH+IE VPE+PLV
Sbjct: 119 QKRYAICSALAASALPALVMSKGHRIEEVPELPLV 153
>sp|P36578|RL4_HUMAN 60S ribosomal protein L4 OS=Homo sapiens GN=RPL4 PE=1 SV=5
Length = 427
Score = 223 bits (569), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 113/155 (72%), Positives = 131/155 (84%), Gaps = 3/155 (1%)
Query: 3 AAARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKA 62
A ARPLI+V S +G+ + V LP V KA IRPDIV FVH+N+ KN+RQPYAVS A
Sbjct: 2 ACARPLISVYSEKGE---SSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 58
Query: 63 GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
GHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++N
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 123 QKRYAIVSAIAASAVPSLVMARGHKIETVPEMPLV 157
QKRYAI SA+AASA+P+LVM++GH+IE VPE+PLV
Sbjct: 119 QKRYAICSALAASALPALVMSKGHRIEEVPELPLV 153
>sp|Q9D8E6|RL4_MOUSE 60S ribosomal protein L4 OS=Mus musculus GN=Rpl4 PE=1 SV=3
Length = 419
Score = 223 bits (568), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 113/155 (72%), Positives = 131/155 (84%), Gaps = 3/155 (1%)
Query: 3 AAARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKA 62
A ARPLI+V S +G+ + V LP V KA IRPDIV FVH+N+ KN+RQPYAVS A
Sbjct: 2 ACARPLISVYSEKGE---SSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 58
Query: 63 GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
GHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++N
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 123 QKRYAIVSAIAASAVPSLVMARGHKIETVPEMPLV 157
QKRYAI SA+AASA+P+LVM++GH+IE VPE+PLV
Sbjct: 119 QKRYAICSALAASALPALVMSKGHRIEEVPELPLV 153
>sp|Q4R5P9|RL4_MACFA 60S ribosomal protein L4 OS=Macaca fascicularis GN=RPL4 PE=2 SV=1
Length = 427
Score = 222 bits (566), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 113/155 (72%), Positives = 130/155 (83%), Gaps = 3/155 (1%)
Query: 3 AAARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKA 62
A ARPLI+V S +G+ + V LP V KA IRPDIV FVH+N+ KN+RQPYAVS A
Sbjct: 2 ACARPLISVYSEKGE---SSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 58
Query: 63 GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
GHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++N
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 123 QKRYAIVSAIAASAVPSLVMARGHKIETVPEMPLV 157
QKRYAI SA+AASA+P+LVM++GH IE VPE+PLV
Sbjct: 119 QKRYAICSALAASALPALVMSKGHSIEEVPELPLV 153
>sp|P02385|RL4B_XENLA 60S ribosomal protein L4-B OS=Xenopus laevis GN=rpl4-b PE=2 SV=2
Length = 401
Score = 222 bits (565), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 109/155 (70%), Positives = 132/155 (85%), Gaps = 3/155 (1%)
Query: 3 AAARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKA 62
A ARPLI+V S +G+ + V +P V KA IRPDIV FVH+N+ KN+RQPYAVS+ A
Sbjct: 6 ACARPLISVYSEKGETS---GKNVTMPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSKLA 62
Query: 63 GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
GHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++N
Sbjct: 63 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 122
Query: 123 QKRYAIVSAIAASAVPSLVMARGHKIETVPEMPLV 157
QKRYA+ SA+AASA+P+L+M++GH+IE +PE+PLV
Sbjct: 123 QKRYAVCSALAASALPALIMSKGHRIEEIPEVPLV 157
>sp|P08429|RL4A_XENLA 60S ribosomal protein L4-A OS=Xenopus laevis GN=rpl4-a PE=2 SV=2
Length = 396
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 108/155 (69%), Positives = 132/155 (85%), Gaps = 3/155 (1%)
Query: 3 AAARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKA 62
A ARPLI+V S +G+ + V +P V +A IRPDIV FVH+N+ KN+RQPYAVS+ A
Sbjct: 6 ACARPLISVYSEKGE---SSGKNVTMPAVFRAPIRPDIVNFVHTNLRKNNRQPYAVSKLA 62
Query: 63 GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
GHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++N
Sbjct: 63 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 122
Query: 123 QKRYAIVSAIAASAVPSLVMARGHKIETVPEMPLV 157
QKRYA+ SA+AASA+P+L+M++GH+IE +PE+PLV
Sbjct: 123 QKRYAVCSALAASALPALIMSKGHRIEEIPEVPLV 157
>sp|P50878|RL4_RAT 60S ribosomal protein L4 OS=Rattus norvegicus GN=Rpl4 PE=1 SV=3
Length = 421
Score = 221 bits (562), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 112/155 (72%), Positives = 130/155 (83%), Gaps = 3/155 (1%)
Query: 3 AAARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKA 62
A ARPLI+V S +G+ + V LP V KA IRPDIV FVH+N+ KN+RQPYAVS A
Sbjct: 2 ACARPLISVYSEKGE---SSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 58
Query: 63 GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122
GHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++N
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 123 QKRYAIVSAIAASAVPSLVMARGHKIETVPEMPLV 157
QKRYAI SA+AASA+P+LVM++GH +E VPE+PLV
Sbjct: 119 QKRYAICSALAASALPALVMSKGHCVEEVPELPLV 153
>sp|P09180|RL4_DROME 60S ribosomal protein L4 OS=Drosophila melanogaster GN=RpL4 PE=2
SV=2
Length = 401
Score = 218 bits (555), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 104/153 (67%), Positives = 124/153 (81%), Gaps = 2/153 (1%)
Query: 5 ARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGH 64
ARPL++V + + + A D + LP V KA IRPD+V VH + +N+RQ YAVS AGH
Sbjct: 6 ARPLVSVYTEKNEPAKD--KNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGH 63
Query: 65 QTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQK 124
QTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK +RRWHRK+NVNQ+
Sbjct: 64 QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQR 123
Query: 125 RYAIVSAIAASAVPSLVMARGHKIETVPEMPLV 157
RYA+VSAIAAS VP+LV ++GH I+ V E PLV
Sbjct: 124 RYALVSAIAASGVPALVQSKGHVIDGVSEFPLV 156
>sp|P49669|RL4_TRYBB 60S ribosomal protein L4 OS=Trypanosoma brucei brucei GN=RPL4 PE=3
SV=1
Length = 374
Score = 208 bits (530), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 100/153 (65%), Positives = 123/153 (80%), Gaps = 3/153 (1%)
Query: 5 ARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGH 64
ARP ++V S D T LP V A IR D+V FVH+N++KNSRQPYAV+R +G
Sbjct: 3 ARPSVSVYSASEDKVV---GTCSLPAVFTAPIRHDVVQFVHTNMAKNSRQPYAVNRLSGM 59
Query: 65 QTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQK 124
+ S ESWGTGRAV+RIPR+ GGGT +G GAFGNMCRGGRMFAPTKI+RRWHRKIN++QK
Sbjct: 60 KHSTESWGTGRAVARIPRIHGGGTSMSGAGAFGNMCRGGRMFAPTKIFRRWHRKINLHQK 119
Query: 125 RYAIVSAIAASAVPSLVMARGHKIETVPEMPLV 157
R+A+VSA+AAS++P+LVM+RGHKIE V E+PLV
Sbjct: 120 RFAVVSALAASSLPALVMSRGHKIENVAEVPLV 152
>sp|O02056|RL4_CAEEL 60S ribosomal protein L4 OS=Caenorhabditis elegans GN=rpl-4 PE=1
SV=3
Length = 345
Score = 197 bits (502), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/154 (62%), Positives = 118/154 (76%), Gaps = 3/154 (1%)
Query: 4 AARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAG 63
AARPL+TV E AT S + LP V + IRPD+V F+ + +N RQ +AV+ KAG
Sbjct: 2 AARPLVTVYD-EKYEATQ--SQIRLPAVFRTPIRPDLVSFIADQVRRNRRQAHAVNTKAG 58
Query: 64 HQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQ 123
Q SAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGG MFAP K++RRWHR +N+ Q
Sbjct: 59 KQHSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGHMFAPLKVFRRWHRNVNIAQ 118
Query: 124 KRYAIVSAIAASAVPSLVMARGHKIETVPEMPLV 157
KRYA+ SAIAAS +P+L+ ARGH I+ V E+PLV
Sbjct: 119 KRYAVSSAIAASGIPALLQARGHVIDQVAEVPLV 152
>sp|Q54Z69|RL4_DICDI 60S ribosomal protein L4 OS=Dictyostelium discoideum GN=rpl4 PE=1
SV=1
Length = 369
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/152 (65%), Positives = 119/152 (78%), Gaps = 4/152 (2%)
Query: 6 RPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQ 65
RP + V D V LP+V+ IRPD+V FVH+N++KN+RQ Y + AG Q
Sbjct: 4 RPFVQV----FDAQNKVVGKVKLPNVLTTPIRPDLVNFVHTNLNKNARQAYGAAPYAGEQ 59
Query: 66 TSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKR 125
TSAESWGTGRAV+RIPRVPG GTHR+GQGAFGNMCRGGRM+ P K WRRW+RK+NVNQKR
Sbjct: 60 TSAESWGTGRAVARIPRVPGSGTHRSGQGAFGNMCRGGRMYGPNKTWRRWNRKVNVNQKR 119
Query: 126 YAIVSAIAASAVPSLVMARGHKIETVPEMPLV 157
YA+VSA+AASAVP+LVMARGH+I + E+PLV
Sbjct: 120 YAVVSALAASAVPALVMARGHRINGINEVPLV 151
>sp|P49626|RL4B_YEAST 60S ribosomal protein L4-B OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPL4B PE=1 SV=2
Length = 362
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 104/153 (67%), Positives = 125/153 (81%), Gaps = 3/153 (1%)
Query: 5 ARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGH 64
+RP +TV SL G+ +A +PLP V A IRPDIV V ++++KN RQ YAVS KAGH
Sbjct: 2 SRPQVTVHSLTGEATANA---LPLPAVFSAPIRPDIVHTVFTSVNKNKRQAYAVSEKAGH 58
Query: 65 QTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQK 124
QTSAESWGTGRAV+RIPRV GGGT R+GQGAFGNMCRGGRMFAPTK WR+W+ K+N N+K
Sbjct: 59 QTSAESWGTGRAVARIPRVGGGGTGRSGQGAFGNMCRGGRMFAPTKTWRKWNVKVNHNEK 118
Query: 125 RYAIVSAIAASAVPSLVMARGHKIETVPEMPLV 157
RYA SAIAA+AV SLV+ARGH++E +PE+PLV
Sbjct: 119 RYATASAIAATAVASLVLARGHRVEKIPEIPLV 151
>sp|P10664|RL4A_YEAST 60S ribosomal protein L4-A OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPL4A PE=1 SV=4
Length = 362
Score = 181 bits (459), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/153 (67%), Positives = 125/153 (81%), Gaps = 3/153 (1%)
Query: 5 ARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGH 64
+RP +TV SL G+ +A +PLP V A IRPDIV V ++++KN RQ YAVS KAGH
Sbjct: 2 SRPQVTVHSLTGEATANA---LPLPAVFSAPIRPDIVHTVFTSVNKNKRQAYAVSEKAGH 58
Query: 65 QTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQK 124
QTSAESWGTGRAV+RIPRV GGGT R+GQGAFGNMCRGGRMFAPTK WR+W+ K+N N+K
Sbjct: 59 QTSAESWGTGRAVARIPRVGGGGTGRSGQGAFGNMCRGGRMFAPTKTWRKWNVKVNHNEK 118
Query: 125 RYAIVSAIAASAVPSLVMARGHKIETVPEMPLV 157
RYA SAIAA+AV SLV+ARGH++E +PE+PLV
Sbjct: 119 RYATASAIAATAVASLVLARGHRVEKIPEIPLV 151
>sp|P0DJ55|RL4_TETTS 60S ribosomal protein L4 OS=Tetrahymena thermophila (strain SB210)
GN=RPL4 PE=1 SV=1
Length = 410
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 106/157 (67%), Gaps = 5/157 (3%)
Query: 5 ARPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVS----R 60
+RP I V + + ++ + LP V A IR DIV V ++++KN +Q V
Sbjct: 3 SRPQIHVHDAK-EANKQTATKLTLPAVFTAPIRTDIVHKVFTDLNKNRKQASGVKISTRG 61
Query: 61 KAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120
AG SAESWGTGRAV+RIPRV G GTHR+GQ AFGN CR GRMFAP K +RR HR++N
Sbjct: 62 TAGMGHSAESWGTGRAVARIPRVGGSGTHRSGQAAFGNQCRKGRMFAPLKTYRRVHRRVN 121
Query: 121 VNQKRYAIVSAIAASAVPSLVMARGHKIETVPEMPLV 157
VNQKR+A+ +A+AASA+ LV ARGH+I V E+P V
Sbjct: 122 VNQKRHAVAAALAASALVPLVFARGHRISNVQELPYV 158
>sp|O15594|RL4_ENTHI 60S ribosomal protein L4 (Fragments) OS=Entamoeba histolytica
GN=RPL4 PE=2 SV=2
Length = 245
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 60/97 (61%), Positives = 72/97 (74%)
Query: 61 KAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 120
KAG Q SA SWGTGRAV+RIPR+ G G+ R GQGAFGNM R G MF+P K +R+W RK
Sbjct: 3 KAGKQHSAISWGTGRAVARIPRISGSGSGRNGQGAFGNMTRKGHMFSPLKNFRKWQRKTP 62
Query: 121 VNQKRYAIVSAIAASAVPSLVMARGHKIETVPEMPLV 157
+R+A+ S IAASAVP+LV ARGH I VP++P V
Sbjct: 63 KQMRRFAVASCIAASAVPALVSARGHHIAGVPQLPSV 99
>sp|O26111|RL4_METTH 50S ribosomal protein L4P OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=rpl4p PE=3 SV=1
Length = 254
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 83/149 (55%), Gaps = 9/149 (6%)
Query: 9 ITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTSA 68
I V SLEG+ A + LP++ RPD++ + QP+ AG +TSA
Sbjct: 3 IKVYSLEGE----AIDEMELPEIFNEEFRPDVIKRAVLSAQTARVQPWGPDPMAGKRTSA 58
Query: 69 ESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYAI 128
+S+G GR V+ +PR+ G + AF GGR P + + +H +IN ++R AI
Sbjct: 59 QSYGAGRGVAMVPRIKNGS-----RAAFVPQAVGGRRAHPPRPQKNYHERINRKERRLAI 113
Query: 129 VSAIAASAVPSLVMARGHKIETVPEMPLV 157
SA+AA+A LV ARGH+IE VP++PLV
Sbjct: 114 RSAVAATARKDLVEARGHRIENVPQLPLV 142
>sp|A5UL88|RL4_METS3 50S ribosomal protein L4P OS=Methanobrevibacter smithii (strain PS
/ ATCC 35061 / DSM 861) GN=rpl4p PE=3 SV=1
Length = 254
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 83/148 (56%), Gaps = 9/148 (6%)
Query: 10 TVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTSAE 69
V S+EG++ + + LP + RPD++ + QP+ +AG +TSA+
Sbjct: 4 NVYSMEGEVKEE----IELPAIFNEEYRPDLIKRAVISAQTARVQPWGNDPEAGKRTSAK 59
Query: 70 SWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYAIV 129
WG+GR +R+PR+ G + AF M GGR PT+ + H KIN+ ++R+AI
Sbjct: 60 GWGSGRGTARVPRIKNGS-----KAAFVPMAVGGRRAHPTRAEKNHHEKINIKERRFAIR 114
Query: 130 SAIAASAVPSLVMARGHKIETVPEMPLV 157
SA+AA+A LV RGH++ + ++P++
Sbjct: 115 SAVAATANKELVENRGHRLGDLEQVPII 142
>sp|Q2NFV7|RL4_METST 50S ribosomal protein L4P OS=Methanosphaera stadtmanae (strain DSM
3091) GN=rpl4p PE=3 SV=1
Length = 259
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 82/149 (55%), Gaps = 9/149 (6%)
Query: 9 ITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTSA 68
I V SL+GD+ + + LP++ + RPD++ ++ QP+ AG +T+A
Sbjct: 4 INVYSLKGDI----TEEIELPEIFEEEYRPDVIKRAVISMQTARIQPWGTDPMAGKRTTA 59
Query: 69 ESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYAI 128
ES+G+GR + +PRV G + + AF GGR P ++ +H KIN ++ AI
Sbjct: 60 ESFGSGRGAAMVPRVKG-----SSKAAFVPQAIGGRKAHPPRVNTIYHEKINKKERTLAI 114
Query: 129 VSAIAASAVPSLVMARGHKIETVPEMPLV 157
SAIAA+A LV RGH++ + ++P V
Sbjct: 115 RSAIAATANKELVEQRGHQVSELEQIPFV 143
>sp|Q8ZW51|RL4_PYRAE 50S ribosomal protein L4P OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827)
GN=rpl4p PE=3 SV=1
Length = 283
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 77/149 (51%), Gaps = 7/149 (4%)
Query: 9 ITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTSA 68
+ V ++G D + P IRPD++ + + QP V AG + S
Sbjct: 29 LKVYGIDGAYVADIEA----PLHFLEPIRPDLIRRAYLSALSARFQPKGVYEGAGKEHSC 84
Query: 69 ESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYAI 128
ES+G G ++RIPR G R G F RGGR P K+ ++ H +IN +K+ AI
Sbjct: 85 ESFGVGLGIARIPRYKGSLWPR---GCFAPNTRGGRRAHPPKVEKKLHEEINKKEKKLAI 141
Query: 129 VSAIAASAVPSLVMARGHKIETVPEMPLV 157
SAIAA+A S V ARGH +E VP +P+V
Sbjct: 142 RSAIAATAYRSWVAARGHVVEKVPSLPVV 170
>sp|Q12ZV0|RL4_METBU 50S ribosomal protein L4P OS=Methanococcoides burtonii (strain DSM
6242) GN=rpl4p PE=3 SV=1
Length = 253
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 72/142 (50%), Gaps = 9/142 (6%)
Query: 17 DMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTSAESWGTGRA 76
D++ ++ + LP+V RPD++ + N QPY AG QTSA SWG+GR
Sbjct: 8 DLSGNSKGEIALPEVFSEIFRPDLIKKAVLSAQANRLQPYGTKLYAGMQTSAHSWGSGRG 67
Query: 77 VSRIPRVPGGG-THRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYAIVSAIAAS 135
V+++PR+ G R Q GGR P K KIN +KR A+ SAIAA+
Sbjct: 68 VAQVPRISNGSRVARIPQAV------GGRRAHPPKTETDRTEKINKKEKRLAVRSAIAAT 121
Query: 136 AVPSLVMARGHKIETVPEMPLV 157
LV ARGHK E+P V
Sbjct: 122 IDADLVKARGHKF--TAEVPFV 141
>sp|Q18GF0|RL4_HALWD 50S ribosomal protein L4P OS=Haloquadratum walsbyi (strain DSM
16790) GN=rpl4p PE=3 SV=1
Length = 248
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 75/148 (50%), Gaps = 11/148 (7%)
Query: 10 TVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTSAE 69
T+ +L GD A T+ LP V + RPD++ N +QPY AG +T AE
Sbjct: 4 TIHNLNGDKA----DTLELPAVFETPYRPDVIERAVVAAQANRKQPYGADPYAGMRTPAE 59
Query: 70 SWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYAIV 129
S+G+GR ++ +PR G R Q GR P K + + +N +++ A
Sbjct: 60 SFGSGRGMAHVPR-ENGQARRVPQAV------SGRKAHPPKAEKDQSKSVNTKERKLAFQ 112
Query: 130 SAIAASAVPSLVMARGHKIETVPEMPLV 157
SA+AA+A PS V RGH+ E E+PLV
Sbjct: 113 SAVAATADPSQVEERGHQFENDVELPLV 140
>sp|A3CSZ8|RL4_METMJ 50S ribosomal protein L4P OS=Methanoculleus marisnigri (strain ATCC
35101 / DSM 1498 / JR1) GN=rpl4p PE=3 SV=1
Length = 249
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 81/148 (54%), Gaps = 13/148 (8%)
Query: 11 VQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTSAES 70
V++L G++A + + LP++ + RPD++ + QP+ + AG +TSAES
Sbjct: 5 VRTLTGEIAHE----IDLPEIFREEYRPDLIKRAVLALQSTRFQPHGTNPYAGMRTSAES 60
Query: 71 WGTGRAVSRIPRVPGGG-THRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYAIV 129
WG+GR +++PR+ G R Q GGR P K+ + ++IN +KR A+
Sbjct: 61 WGSGRGAAQVPRLKNGSRVARVPQAT------GGRAAHPPKVEKILVKEINRKEKRKALR 114
Query: 130 SAIAASAVPSLVMARGHKIETVPEMPLV 157
SA+AAS P LV RGH E ++PLV
Sbjct: 115 SAVAASTYPDLVRERGHLFEG--DLPLV 140
>sp|Q8TRU6|RL4_METAC 50S ribosomal protein L4P OS=Methanosarcina acetivorans (strain
ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=rpl4p PE=3
SV=1
Length = 253
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 71/141 (50%), Gaps = 7/141 (4%)
Query: 17 DMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTSAESWGTGRA 76
D+ A V LP V A RPD++ N QPY +G +TSA WG+GR
Sbjct: 8 DLTGKAVGEVELPAVFDADYRPDLIKKAVLAAQANRLQPYGPRLYSGMETSARGWGSGRG 67
Query: 77 VSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYAIVSAIAASA 136
VS +PR+ + + A +GGR P K K+N ++RYAI SAIAA+
Sbjct: 68 VSHVPRLVN-----SSRAARVPHAKGGRRAHPPKPEADRSEKVNTKERRYAIRSAIAATT 122
Query: 137 VPSLVMARGHKIETVPEMPLV 157
P+LV RGH E E+P+V
Sbjct: 123 DPTLVSLRGHIFEA--ELPIV 141
>sp|Q8PV49|RL4_METMA 50S ribosomal protein L4P OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=rpl4p PE=3 SV=1
Length = 253
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 71/141 (50%), Gaps = 7/141 (4%)
Query: 17 DMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTSAESWGTGRA 76
D+ + LP V A RPD++ N QPY S AG +TSA WG+GR
Sbjct: 8 DLTGRTVGEIELPAVFDADYRPDLIKKAVLAAQANRLQPYGPSLYAGMKTSATGWGSGRG 67
Query: 77 VSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYAIVSAIAASA 136
VS +PR+ + + A +GGR P K K+N ++RYAI SAIAA+
Sbjct: 68 VSHVPRLKN-----SSRAARVPHAKGGRRAHPPKPEADRSEKVNTKERRYAIRSAIAATI 122
Query: 137 VPSLVMARGHKIETVPEMPLV 157
P+LV RGH E E+P+V
Sbjct: 123 DPTLVNLRGHIFEA--ELPIV 141
>sp|Q46G96|RL4_METBF 50S ribosomal protein L4P OS=Methanosarcina barkeri (strain Fusaro
/ DSM 804) GN=rpl4p PE=3 SV=1
Length = 253
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 69/141 (48%), Gaps = 7/141 (4%)
Query: 17 DMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTSAESWGTGRA 76
D+ + LPDV RPD++ N QPY AG +TSA WG+GR
Sbjct: 8 DLTGKVVREIELPDVFDVDYRPDLIKKAVLAAQANRLQPYGPRLYAGMETSARGWGSGRG 67
Query: 77 VSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYAIVSAIAASA 136
S +PR+ + + A RGGR P K K+N ++RYAI SAIAA+
Sbjct: 68 TSHVPRLVN-----SSRAARVPHARGGRRAHPPKPEADRSEKVNTKERRYAIRSAIAATR 122
Query: 137 VPSLVMARGHKIETVPEMPLV 157
P+LV RGH E E+P+V
Sbjct: 123 DPTLVSLRGHIFEA--ELPIV 141
>sp|B9LSS6|RL4_HALLT 50S ribosomal protein L4P OS=Halorubrum lacusprofundi (strain ATCC
49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=rpl4p PE=3
SV=1
Length = 248
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 75/154 (48%), Gaps = 23/154 (14%)
Query: 10 TVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTSAE 69
TV L+G DA S V LP + + + RPD++G S N +Q Y AG +T AE
Sbjct: 4 TVHDLDG---GDAGS-VELPAIFETAFRPDLIGRAVSAAQANRKQAYGADEFAGLRTPAE 59
Query: 70 SWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCR------GGRMFAPTKIWRRWHRKINVNQ 123
S+G+GR ++ IPR N+ R GR P K + + +N +
Sbjct: 60 SFGSGRGLAHIPRSE-------------NVARRVPNAVSGRAAHPPKAEKDQTKSLNDKE 106
Query: 124 KRYAIVSAIAASAVPSLVMARGHKIETVPEMPLV 157
++ AI SAIAA+A V RGH + ++PLV
Sbjct: 107 RQLAIRSAIAATADAETVAERGHAFDEDLDLPLV 140
>sp|Q8TY91|RL4_METKA 50S ribosomal protein L4P OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=rpl4p PE=3 SV=1
Length = 260
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 81/148 (54%), Gaps = 6/148 (4%)
Query: 11 VQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTSAES 70
V +LEG+ TV LP + +R D++ N RQPY +AG +TSAES
Sbjct: 5 VFNLEGEEV----DTVELPSFFEEPVRKDLIRRAVLAAQANRRQPYGTDPRAGFRTSAES 60
Query: 71 WGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGG-RMFAPTKIWRRWHRKINVNQKRYAIV 129
WG G V+ +PRV G AG+ A GG + APT + W +++N ++R A+
Sbjct: 61 WGAGHGVAMVPRVKGRRHPAAGRAARVAQAVGGQKAHAPTP-EKDWTQRVNRKERRAALR 119
Query: 130 SAIAASAVPSLVMARGHKIETVPEMPLV 157
SA+AA+A P V RGH I+ VP +P+V
Sbjct: 120 SALAATAKPEFVKERGHVIDDVPHLPVV 147
>sp|Q9YFM1|RL4_AERPE 50S ribosomal protein L4P OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=rpl4p PE=3
SV=3
Length = 272
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 7/131 (5%)
Query: 24 STVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTSAESWGTGRAVSRIPRV 83
+V LP + + +R D++ + QP AG +TSA S G GR V+R+PR+
Sbjct: 27 DSVVLPQIFRFPVRKDLIRRAFLSEFTARLQPKGRDPMAGKRTSAVSLGVGRGVARVPRI 86
Query: 84 PGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYAIVSAIAASAVPSLVMA 143
G + + A NM RGGR P ++ + IN +KR A +SAI+A++ LV
Sbjct: 87 KG-----SLRAALVNMARGGRAAHPPRVEKVLKEYINKKEKRLATISAISATSREDLVRQ 141
Query: 144 RGHKI--ETVP 152
RGH+ ET+P
Sbjct: 142 RGHRFSAETLP 152
>sp|Q4JB41|RL4_SULAC 50S ribosomal protein L4P OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=rpl4p PE=3 SV=1
Length = 266
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 6/141 (4%)
Query: 17 DMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTSAESWGTGRA 76
D+ + + LP +R D++ V + S QP AG +TSA S+G
Sbjct: 14 DLKGNQLEEIELPLFFSYPVRKDLIRRVFLSEFTKSLQPKGRDPLAGKRTSALSFGINLG 73
Query: 77 VSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYAIVSAIAASA 136
++R+PRV G +G+ A GGR+ P +R ++N+ +K+ I+SA+AA+A
Sbjct: 74 IARVPRVKG-----SGEAALAPNTVGGRLAFPPTTEKRLVEEVNLKEKKLGIISALAATA 128
Query: 137 VPSLVMARGHKIETVPEMPLV 157
P+ V ARGH+ T +P++
Sbjct: 129 DPNFVKARGHRF-TSNNVPII 148
>sp|A0B9W9|RL4_METTP 50S ribosomal protein L4P OS=Methanosaeta thermophila (strain DSM
6194 / PT) GN=rpl4p PE=3 SV=1
Length = 251
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 69/141 (48%), Gaps = 7/141 (4%)
Query: 17 DMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTSAESWGTGRA 76
D++ + + LP + RPD++ N QPY AG TSA SWG G
Sbjct: 7 DISGNPVGEIVLPAIFDEEYRPDLIKRAVLAAQANRLQPYGPHFYAGMNTSARSWGPGHG 66
Query: 77 VSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYAIVSAIAASA 136
VSR+PR+ G + A M RGGR P + KIN ++ AI SA+AA+A
Sbjct: 67 VSRVPRIVTG-----RRAAAVPMARGGRASHPPVPSKVLSEKINEKERIKAIRSAVAATA 121
Query: 137 VPSLVMARGHKIETVPEMPLV 157
P +V ARGH E+P+V
Sbjct: 122 KPDIVAARGHLFSG--ELPIV 140
>sp|Q9UXA6|RL4_SULSO 50S ribosomal protein L4P OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=rpl4p PE=3 SV=1
Length = 267
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 69/132 (52%), Gaps = 5/132 (3%)
Query: 26 VPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTSAESWGTGRAVSRIPRVPG 85
V LP + +R D++ V +S QP AG +TSAES+G ++R+PRV
Sbjct: 23 VELPIIFSFPVRKDLIRRVFIAEFTHSLQPKGRDPNAGKRTSAESFGINLGMARVPRVKN 82
Query: 86 GGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYAIVSAIAASAVPSLVMARG 145
+G+ A GGR+ P + ++ + NV +KR A++SA++A+A + V ARG
Sbjct: 83 -----SGEAALAPNTVGGRLAFPPSVNKKLAEEANVKEKRLAVISALSATADIAFVRARG 137
Query: 146 HKIETVPEMPLV 157
H + P+V
Sbjct: 138 HVFKDSVRFPIV 149
>sp|P60846|RL4_METMP 50S ribosomal protein L4P OS=Methanococcus maripaludis (strain S2 /
LL) GN=rpl4p PE=3 SV=1
Length = 252
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 77/149 (51%), Gaps = 10/149 (6%)
Query: 9 ITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTSA 68
+ V +L+G D + LP V +A RPD++ + QP AG++TSA
Sbjct: 3 VKVYNLDGSEKGD----IELPAVFEAEYRPDLIKRAVISSLTAKLQPKGCDAFAGYRTSA 58
Query: 69 ESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYAI 128
+S G G +R+ R G GAF GGR P K+ + +IN +K A+
Sbjct: 59 KSIGKGHGKARVRRTA------QGAGAFVPQAVGGRRAHPPKVEKILFERINRKEKLKAL 112
Query: 129 VSAIAASAVPSLVMARGHKIETVPEMPLV 157
SAIAASA P +V ARGHKIE VP +PLV
Sbjct: 113 ASAIAASANPEIVSARGHKIEGVPSLPLV 141
>sp|O28355|RL4_ARCFU 50S ribosomal protein L4P OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=rpl4p PE=3 SV=1
Length = 252
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 67/141 (47%), Gaps = 7/141 (4%)
Query: 17 DMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTSAESWGTGRA 76
++ + + + LP+V RPDI+ + + RQPY + +G S E+WG G
Sbjct: 7 NLKGEVTEEIELPEVFAEEFRPDIIKRAVLALQSHRRQPYGPNPLSGVDYSWENWGPGHG 66
Query: 77 VSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYAIVSAIAASA 136
+R+PR G + GGR P K R+W KIN + R A+ SAIAA+A
Sbjct: 67 YARVPRWKLG-----RRAVVVPQAVGGRRAHPPKPERKWAEKINKKEMRKALKSAIAATA 121
Query: 137 VPSLVMARGHKIETVPEMPLV 157
LV R H E E+P V
Sbjct: 122 NEELVRQRSHVFEG--ELPKV 140
>sp|C5A285|RL4_THEGJ 50S ribosomal protein L4P OS=Thermococcus gammatolerans (strain DSM
15229 / JCM 11827 / EJ3) GN=rpl4p PE=3 SV=1
Length = 255
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 72/149 (48%), Gaps = 8/149 (5%)
Query: 9 ITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTSA 68
+ V +LEG+ + + LP V RPD++ + QP AG +
Sbjct: 3 VKVFNLEGEPVEE----IELPKVFSTPFRPDLIRRAVIASWTHRIQPQGRDPLAGKRRVT 58
Query: 69 ESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYAI 128
E+ G G ++R+ R+ AF RGGR P K+ + IN ++R AI
Sbjct: 59 ENIGKGHGMARVERIKTPPRF----AAFVPFARGGRRTHPPKVEKIIWEDINKKERRLAI 114
Query: 129 VSAIAASAVPSLVMARGHKIETVPEMPLV 157
+SAIAA+A P LV ARGH ++ VP PLV
Sbjct: 115 MSAIAATANPDLVRARGHVVDNVPAFPLV 143
>sp|A4FVY1|RL4_METM5 50S ribosomal protein L4P OS=Methanococcus maripaludis (strain C5 /
ATCC BAA-1333) GN=rpl4p PE=3 SV=1
Length = 252
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 77/149 (51%), Gaps = 10/149 (6%)
Query: 9 ITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTSA 68
+ V +L+G D + LP V + RPD++ + QP AG++TSA
Sbjct: 3 VKVYNLDGSEKGD----IELPAVFETEYRPDLIKRAVISSLTAKLQPKGCDAFAGYRTSA 58
Query: 69 ESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYAI 128
+S G G +R+ R G GAF GGR P K+ + +IN +K A+
Sbjct: 59 KSIGKGHGKARVRRTA------QGAGAFVPQAVGGRRAHPPKVEKILFERINKKEKLKAL 112
Query: 129 VSAIAASAVPSLVMARGHKIETVPEMPLV 157
SAIAASA+P +V ARGHKIE VP +PLV
Sbjct: 113 ASAIAASAIPEIVSARGHKIEGVPSLPLV 141
>sp|Q2FU92|RL4_METHJ 50S ribosomal protein L4P OS=Methanospirillum hungatei (strain JF-1
/ DSM 864) GN=rpl4p PE=3 SV=1
Length = 249
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 13/138 (9%)
Query: 11 VQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSR--QPYAVSRKAGHQTSA 68
V +L G +A + + LP V + RPD++ + I++ SR QP+ AG SA
Sbjct: 5 VLTLTGSVAHE----IELPPVFSSEFRPDLIK--KAVIAQQSRRYQPHGAYVYAGITASA 58
Query: 69 ESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYAI 128
WG+GR VS +PR+ + + A +GGR P K+ + R IN +KR A+
Sbjct: 59 VGWGSGRGVSHVPRLKN-----SSRAAKVPQAKGGREAHPPKVEKVLIRNINQKEKRKAL 113
Query: 129 VSAIAASAVPSLVMARGH 146
SAIAA+ P LV +RGH
Sbjct: 114 NSAIAATISPELVRSRGH 131
>sp|Q9HPD3|RL4_HALSA 50S ribosomal protein L4P OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=rpl4p PE=1 SV=1
Length = 250
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 74/149 (49%), Gaps = 11/149 (7%)
Query: 9 ITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTSA 68
+TV+ L+GD A T+ LP V + +RPD+V N Q Y AG +T+A
Sbjct: 3 VTVRDLDGDDA----GTLDLPRVFEEPVRPDLVKRAVLAAQANRTQEYGADEYAGLRTTA 58
Query: 69 ESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYAI 128
ES G+GR ++ +P+ GQGA GGR P K + +N +++ A+
Sbjct: 59 ESQGSGRGMAHVPKA-------NGQGARVPQTVGGRKAHPPKAEKDHGLDVNDKERKAAV 111
Query: 129 VSAIAASAVPSLVMARGHKIETVPEMPLV 157
+A+AA+ LV RGH + E PLV
Sbjct: 112 RAAVAATTDSELVADRGHNFDDDVEFPLV 140
>sp|B0R657|RL4_HALS3 50S ribosomal protein L4P OS=Halobacterium salinarum (strain ATCC
29341 / DSM 671 / R1) GN=rpl4p PE=3 SV=1
Length = 250
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 74/149 (49%), Gaps = 11/149 (7%)
Query: 9 ITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTSA 68
+TV+ L+GD A T+ LP V + +RPD+V N Q Y AG +T+A
Sbjct: 3 VTVRDLDGDDA----GTLDLPRVFEEPVRPDLVKRAVLAAQANRTQEYGADEYAGLRTTA 58
Query: 69 ESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYAI 128
ES G+GR ++ +P+ GQGA GGR P K + +N +++ A+
Sbjct: 59 ESQGSGRGMAHVPKA-------NGQGARVPQTVGGRKAHPPKAEKDHGLDVNDKERKAAV 111
Query: 129 VSAIAASAVPSLVMARGHKIETVPEMPLV 157
+A+AA+ LV RGH + E PLV
Sbjct: 112 RAAVAATTDSELVADRGHNFDDDVEFPLV 140
>sp|A6VHD3|RL4_METM7 50S ribosomal protein L4P OS=Methanococcus maripaludis (strain C7 /
ATCC BAA-1331) GN=rpl4p PE=3 SV=1
Length = 252
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 77/149 (51%), Gaps = 10/149 (6%)
Query: 9 ITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTSA 68
+ V +L+G D + LP V + RPD++ + QP AG++TSA
Sbjct: 3 VKVYNLDGSEKGD----IELPAVFETEYRPDLIKRAVISSLTAKLQPKGCDAFAGYRTSA 58
Query: 69 ESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYAI 128
+S G G +R+ R G GAF GGR P K+ + +IN +K A+
Sbjct: 59 KSIGKGHGKARVRRTA------QGAGAFVPQAVGGRRAHPPKVEKILFERINRKEKLKAL 112
Query: 129 VSAIAASAVPSLVMARGHKIETVPEMPLV 157
SAIAASA+P +V ARGHKIE VP +PLV
Sbjct: 113 ASAIAASAIPEIVSARGHKIEGVPSLPLV 141
>sp|C3MVH9|RL4_SULIM 50S ribosomal protein L4P OS=Sulfolobus islandicus (strain M.14.25
/ Kamchatka #1) GN=rpl4p PE=3 SV=1
Length = 267
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 5/150 (3%)
Query: 8 LITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTS 67
L+ S+ D + V LP + +R DI+ V +S QP AG +TS
Sbjct: 5 LVKKNSVILDKDGNKVKEVELPFIFSFPVRKDIIRRVFLAEFTHSLQPKGRDPMAGKRTS 64
Query: 68 AESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYA 127
AES+G ++R+PRV +G+ A GGR+ P + ++ ++N +K+ A
Sbjct: 65 AESFGINLGMARVPRVKN-----SGEAALAPNTVGGRLTFPPSVDKKLVEEVNDKEKQLA 119
Query: 128 IVSAIAASAVPSLVMARGHKIETVPEMPLV 157
++SA++A+A V ARGH + P+V
Sbjct: 120 VISALSATADTVFVKARGHVFKDSVSFPIV 149
>sp|C4KHF7|RL4_SULIK 50S ribosomal protein L4P OS=Sulfolobus islandicus (strain M.16.4 /
Kamchatka #3) GN=rpl4p PE=3 SV=1
Length = 267
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 5/150 (3%)
Query: 8 LITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTS 67
L+ S+ D + V LP + +R DI+ V +S QP AG +TS
Sbjct: 5 LVKKNSVILDKDGNKVKEVELPFIFSFPVRKDIIRRVFLAEFTHSLQPKGRDPMAGKRTS 64
Query: 68 AESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYA 127
AES+G ++R+PRV +G+ A GGR+ P + ++ ++N +K+ A
Sbjct: 65 AESFGINLGMARVPRVKN-----SGEAALAPNTVGGRLTFPPSVDKKLVEEVNDKEKQLA 119
Query: 128 IVSAIAASAVPSLVMARGHKIETVPEMPLV 157
++SA++A+A V ARGH + P+V
Sbjct: 120 VISALSATADTVFVKARGHVFKDSVSFPIV 149
>sp|C3N5S8|RL4_SULIA 50S ribosomal protein L4P OS=Sulfolobus islandicus (strain M.16.27)
GN=rpl4p PE=3 SV=1
Length = 267
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 5/150 (3%)
Query: 8 LITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTS 67
L+ S+ D + V LP + +R DI+ V +S QP AG +TS
Sbjct: 5 LVKKNSVILDKDGNKVKEVELPFIFSFPVRKDIIRRVFLAEFTHSLQPKGRDPMAGKRTS 64
Query: 68 AESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYA 127
AES+G ++R+PRV +G+ A GGR+ P + ++ ++N +K+ A
Sbjct: 65 AESFGINLGMARVPRVKN-----SGEAALAPNTVGGRLTFPPSVDKKLVEEVNDKEKQLA 119
Query: 128 IVSAIAASAVPSLVMARGHKIETVPEMPLV 157
++SA++A+A V ARGH + P+V
Sbjct: 120 VISALSATADTVFVKARGHVFKDSVSFPIV 149
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.130 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,390,769
Number of Sequences: 539616
Number of extensions: 2234657
Number of successful extensions: 5499
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 5373
Number of HSP's gapped (non-prelim): 97
length of query: 157
length of database: 191,569,459
effective HSP length: 108
effective length of query: 49
effective length of database: 133,290,931
effective search space: 6531255619
effective search space used: 6531255619
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)