Query 048063
Match_columns 484
No_of_seqs 343 out of 1963
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 09:59:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048063.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048063hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2nyi_A Unknown protein; protei 99.7 4.2E-17 1.4E-21 153.6 17.8 157 36-206 4-164 (195)
2 2nyi_A Unknown protein; protei 99.7 2.2E-17 7.5E-22 155.5 12.8 127 291-421 4-146 (195)
3 1u8s_A Glycine cleavage system 99.7 1.6E-15 5.6E-20 142.0 16.9 156 37-206 6-167 (192)
4 1u8s_A Glycine cleavage system 99.6 3.9E-15 1.3E-19 139.4 16.8 121 291-419 5-146 (192)
5 3p96_A Phosphoserine phosphata 98.8 8.2E-08 2.8E-12 99.6 18.3 154 36-206 11-167 (415)
6 3p96_A Phosphoserine phosphata 98.7 3.9E-07 1.3E-11 94.6 16.8 123 291-418 11-150 (415)
7 2f06_A Conserved hypothetical 98.4 1.1E-05 3.7E-10 71.3 17.6 110 38-178 7-117 (144)
8 2f06_A Conserved hypothetical 98.3 2.6E-05 8.7E-10 68.9 15.7 112 293-416 7-118 (144)
9 1zpv_A ACT domain protein; str 98.1 2E-05 6.8E-10 63.8 10.2 67 132-205 4-70 (91)
10 1zpv_A ACT domain protein; str 97.9 8.3E-05 2.8E-09 60.0 10.7 50 37-86 5-54 (91)
11 2ko1_A CTR148A, GTP pyrophosph 97.8 7.9E-05 2.7E-09 59.5 9.2 63 132-201 4-66 (88)
12 2ko1_A CTR148A, GTP pyrophosph 97.7 0.00013 4.4E-09 58.2 8.9 62 370-436 5-66 (88)
13 3l76_A Aspartokinase; alloster 97.7 0.025 8.4E-07 61.4 29.3 296 37-436 270-588 (600)
14 2re1_A Aspartokinase, alpha an 97.5 0.0012 4.1E-08 59.7 12.3 130 290-436 23-164 (167)
15 2re1_A Aspartokinase, alpha an 97.4 0.0017 5.9E-08 58.6 12.8 109 36-164 24-137 (167)
16 3o1l_A Formyltetrahydrofolate 97.3 0.0034 1.2E-07 62.4 14.7 49 36-84 21-71 (302)
17 3obi_A Formyltetrahydrofolate 97.3 0.0068 2.3E-07 59.8 16.8 118 37-169 6-125 (288)
18 3nrb_A Formyltetrahydrofolate 97.2 0.0084 2.9E-07 59.1 16.3 117 36-169 6-124 (287)
19 3n0v_A Formyltetrahydrofolate 97.2 0.0076 2.6E-07 59.4 15.8 48 37-84 8-57 (286)
20 3lou_A Formyltetrahydrofolate 97.2 0.008 2.7E-07 59.4 15.2 48 36-83 9-58 (292)
21 2dtj_A Aspartokinase; protein- 97.1 0.026 9E-07 51.4 17.0 139 35-207 13-158 (178)
22 3nrb_A Formyltetrahydrofolate 96.9 0.0027 9.3E-08 62.6 9.6 65 132-204 6-72 (287)
23 3o1l_A Formyltetrahydrofolate 96.9 0.016 5.4E-07 57.5 15.0 40 292-331 22-63 (302)
24 3obi_A Formyltetrahydrofolate 96.9 0.022 7.7E-07 56.0 15.6 103 292-399 6-118 (288)
25 2dt9_A Aspartokinase; protein- 96.9 0.0052 1.8E-07 55.4 10.0 133 290-436 14-156 (167)
26 3lou_A Formyltetrahydrofolate 96.8 0.018 6.3E-07 56.8 14.6 36 292-327 10-45 (292)
27 2f1f_A Acetolactate synthase i 96.8 0.0042 1.4E-07 56.2 9.1 65 133-205 3-69 (164)
28 3n0v_A Formyltetrahydrofolate 96.8 0.018 6E-07 56.8 14.2 36 292-327 8-43 (286)
29 2dtj_A Aspartokinase; protein- 96.8 0.011 3.6E-07 54.0 11.6 130 290-436 13-156 (178)
30 2pc6_A Probable acetolactate s 96.6 0.0068 2.3E-07 54.8 8.9 65 133-205 4-70 (165)
31 2dt9_A Aspartokinase; protein- 96.6 0.0093 3.2E-07 53.7 9.7 109 35-164 14-129 (167)
32 2f1f_A Acetolactate synthase i 96.5 0.0056 1.9E-07 55.4 7.5 70 371-447 4-77 (164)
33 3s1t_A Aspartokinase; ACT doma 96.2 0.066 2.3E-06 48.9 13.1 137 36-206 15-158 (181)
34 2pc6_A Probable acetolactate s 96.2 0.013 4.6E-07 52.9 7.9 70 371-447 5-78 (165)
35 2jhe_A Transcription regulator 96.1 0.02 6.9E-07 51.1 8.9 59 135-203 2-60 (190)
36 2jhe_A Transcription regulator 96.1 0.019 6.6E-07 51.3 8.6 36 372-407 2-37 (190)
37 2fgc_A Acetolactate synthase, 96.0 0.02 6.7E-07 52.9 8.5 65 133-205 29-95 (193)
38 3l76_A Aspartokinase; alloster 95.8 0.63 2.1E-05 50.3 20.4 139 291-444 354-523 (600)
39 3s1t_A Aspartokinase; ACT doma 95.7 0.072 2.5E-06 48.7 11.0 132 291-436 15-157 (181)
40 2fgc_A Acetolactate synthase, 95.6 0.22 7.5E-06 45.9 13.6 110 37-165 29-144 (193)
41 3ab4_A Aspartokinase; aspartat 95.5 0.45 1.5E-05 49.1 17.2 137 36-206 263-406 (421)
42 1y7p_A Hypothetical protein AF 95.3 0.023 7.8E-07 53.4 6.2 69 370-445 4-77 (223)
43 1y7p_A Hypothetical protein AF 95.3 0.029 1E-06 52.6 6.9 38 133-170 4-41 (223)
44 4go7_X Aspartokinase; transfer 95.0 0.092 3.2E-06 48.8 9.3 133 290-436 33-176 (200)
45 4go7_X Aspartokinase; transfer 94.9 0.09 3.1E-06 48.9 8.9 111 35-165 33-150 (200)
46 3ab4_A Aspartokinase; aspartat 94.7 0.17 5.8E-06 52.3 11.4 133 290-436 262-405 (421)
47 3c1m_A Probable aspartokinase; 93.2 1 3.5E-05 47.2 13.9 114 36-162 317-436 (473)
48 2qmx_A Prephenate dehydratase; 91.1 0.52 1.8E-05 46.1 7.9 56 371-427 201-257 (283)
49 1sc6_A PGDH, D-3-phosphoglycer 90.6 0.51 1.7E-05 48.5 7.7 62 370-434 331-393 (404)
50 3c1m_A Probable aspartokinase; 90.1 1.7 5.7E-05 45.5 11.3 129 290-436 316-467 (473)
51 1ygy_A PGDH, D-3-phosphoglycer 90.0 1.1 3.7E-05 47.7 9.9 64 129-198 450-515 (529)
52 1sc6_A PGDH, D-3-phosphoglycer 89.7 0.85 2.9E-05 46.8 8.5 50 132-181 330-379 (404)
53 3mwb_A Prephenate dehydratase; 88.9 0.86 2.9E-05 45.2 7.5 66 370-436 201-271 (313)
54 3tvi_A Aspartokinase; structur 88.8 5.4 0.00018 41.4 13.9 108 36-166 297-410 (446)
55 3luy_A Probable chorismate mut 88.5 1.9 6.4E-05 43.1 9.7 48 379-427 217-265 (329)
56 1ygy_A PGDH, D-3-phosphoglycer 88.0 1.6 5.6E-05 46.3 9.5 61 370-434 454-516 (529)
57 2qmw_A PDT, prephenate dehydra 87.0 1.7 5.7E-05 42.1 8.1 50 370-420 186-239 (267)
58 2qmx_A Prephenate dehydratase; 86.1 3.1 0.00011 40.5 9.6 51 132-182 199-250 (283)
59 3k5p_A D-3-phosphoglycerate de 85.0 1.6 5.5E-05 45.0 7.2 48 36-83 342-389 (416)
60 3tvi_A Aspartokinase; structur 83.4 3.9 0.00013 42.4 9.4 131 290-436 296-437 (446)
61 3k5p_A D-3-phosphoglycerate de 83.4 5.8 0.0002 40.7 10.6 50 131-180 341-390 (416)
62 3mtj_A Homoserine dehydrogenas 83.0 0.99 3.4E-05 47.0 4.7 34 370-403 359-392 (444)
63 3mtj_A Homoserine dehydrogenas 82.1 3.2 0.00011 43.1 8.1 52 131-182 357-410 (444)
64 3luy_A Probable chorismate mut 81.7 9 0.00031 38.1 10.9 50 133-182 206-258 (329)
65 2cdq_A Aspartokinase; aspartat 80.1 23 0.0008 37.2 14.1 137 36-206 340-483 (510)
66 3mwb_A Prephenate dehydratase; 79.3 7.4 0.00025 38.4 9.3 51 132-182 200-252 (313)
67 2cdq_A Aspartokinase; aspartat 77.7 4.9 0.00017 42.4 8.0 134 290-436 339-482 (510)
68 3mah_A Aspartokinase; aspartat 76.4 11 0.00039 32.7 8.9 128 36-206 17-150 (157)
69 2qmw_A PDT, prephenate dehydra 75.9 5.3 0.00018 38.6 7.0 51 131-181 184-238 (267)
70 1phz_A Protein (phenylalanine 61.8 8.5 0.00029 39.6 5.3 50 370-420 34-84 (429)
71 3mah_A Aspartokinase; aspartat 56.8 6.1 0.00021 34.5 2.8 124 291-436 17-149 (157)
72 1phz_A Protein (phenylalanine 55.9 14 0.00046 38.1 5.6 52 130-181 31-83 (429)
73 3g12_A Putative lactoylglutath 40.2 83 0.0028 25.4 7.3 49 291-346 66-115 (128)
74 1rwu_A Hypothetical UPF0250 pr 38.6 1.5E+02 0.0051 24.3 8.3 64 36-106 35-101 (109)
75 1tdj_A Biosynthetic threonine 34.4 1.6E+02 0.0056 30.7 10.0 135 38-179 339-481 (514)
76 3g12_A Putative lactoylglutath 29.8 1.6E+02 0.0054 23.6 7.4 49 36-91 66-115 (128)
77 1zhv_A Hypothetical protein AT 26.5 1.7E+02 0.006 24.8 7.1 44 133-181 62-108 (134)
78 1ib8_A Conserved protein SP14. 23.8 3.6E+02 0.012 23.4 9.5 92 305-405 14-111 (164)
79 2j0w_A Lysine-sensitive aspart 22.0 37 0.0013 35.0 2.3 119 290-418 306-433 (449)
No 1
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.74 E-value=4.2e-17 Score=153.55 Aligned_cols=157 Identities=15% Similarity=0.146 Sum_probs=114.9
Q ss_pred CeEEEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEeeCCCCCCCcHHHHHHHHHHHccCCCCCCccc
Q 048063 36 DCTVVKVDSVSKQGLLLEMVQVLTDMNLTISKSYISSDAGWFMDVFHVKDEHGNKLTDQKVINYIQQAIGTTGEIPSSAV 115 (484)
Q Consensus 36 ~~t~I~V~~~DrpGLfa~ia~vL~~~glnI~~A~Itt~~g~~~d~F~V~d~~g~~~~~~~~~~~L~~~L~~~~~~~~~~~ 115 (484)
..++|+|+|+||||||++++++|+++|+||++|++++..|.+.-.|.|..+.. ....+++.|++.|..... .+..
T Consensus 4 ~~~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~~~~f~m~~~v~~~~~---~~~~~~~~l~~~L~~~~~--~~~~ 78 (195)
T 2nyi_A 4 QSFVVSVAGSDRVGIVHDFSWALKNISANVESSRMACLGGDFAMIVLVSLNAK---DGKLIQSALESALPGFQI--STRR 78 (195)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEESSS---SSHHHHHHHHHHSTTCEE--EEEE
T ss_pred eEEEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEECCeEEEEEEEEecCc---cchhHHHHHHHHHHHHHH--hcCC
Confidence 35799999999999999999999999999999999665454444788865421 223467888888864321 1100
Q ss_pred cccccce--eeecCCCCCCeEEEEEEecCCCchHHHHHHHHHhCCCeEEEEEEEecC--CeeEEEEEEEeCCCCCCCCCh
Q 048063 116 AKTYTNK--AVFGSEYPSEHTAIEMTGTDRPGLFSEISAALADLHCNIVEAHAWSHN--DRLACVAYVSDQSTDTPIDDP 191 (484)
Q Consensus 116 ~~~~~~v--~v~~~~~~~~~t~i~V~~~DrpGLL~~Ia~vL~~~glnI~~A~i~T~~--~~~~dvF~V~~~~~g~~i~d~ 191 (484)
...+ . -. ......++|+|.|+|||||+++|+++|+++|+||.+++.+|.+ ++..+.|+++.. .+.+ +.
T Consensus 79 ---~~~~~~~-~~-~~~~~~~iltv~g~DrpGiva~Vt~~La~~g~nI~~~~~~t~~~~~~~~~~F~m~~~-~~~~--~~ 150 (195)
T 2nyi_A 79 ---ASSVAER-HV-SPDTREYELYVEGPDSEGIVEAVTAVLAKKGANIVELETETLPAPFAGFTLFRMGSR-VAFP--FP 150 (195)
T ss_dssp ---CCCC-----C-CTTEEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEEECSSTTCEEEEEEEE-EEEE--GG
T ss_pred ---eEEEEeC-Cc-CCCCcEEEEEEEeCCCcCHHHHHHHHHHHcCCCEEEceeeecccccCCCCeEEEEEE-EEcC--CC
Confidence 0000 0 01 2344678999999999999999999999999999999999977 666789998776 3433 23
Q ss_pred hHHHHHHHHHHHHhc
Q 048063 192 GRLATIEEYITTVLR 206 (484)
Q Consensus 192 ~~~~~l~~~L~~~L~ 206 (484)
.. +.|+++|.....
T Consensus 151 ~~-~~l~~~l~~~a~ 164 (195)
T 2nyi_A 151 LY-QEVVTALSRVEE 164 (195)
T ss_dssp GH-HHHHHHHHHHHH
T ss_pred cc-HHHHHHHHHHHH
Confidence 45 888888886553
No 2
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.72 E-value=2.2e-17 Score=155.48 Aligned_cols=127 Identities=17% Similarity=0.191 Sum_probs=101.0
Q ss_pred ceeEEEEEeCCCCchHHHHHHHHhhCCceEEEEEEEecC-CeEEEEEEEEccCCCCCCChhHHHHHHHHHHHHHhh----
Q 048063 291 GYSIVSVDCKDRPRLMFDTVCTLTDMQYVVFHASIGCHG-DYAFQEYFIRHIDGYALNTEGEKERVIKCLEAAIER---- 365 (484)
Q Consensus 291 ~~t~V~V~~~DrpgLl~~i~~~L~~~~l~I~~A~i~t~~-g~a~d~f~V~~~~g~~~~~~~~~e~l~~~L~~~l~r---- 365 (484)
..++|+|+|+||||||++++.+|+++||||.+|++.+.+ ++++ .|.+.... . ....+.+.|++.|......
T Consensus 4 ~~~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~~~~f~m-~~~v~~~~-~--~~~~~~~~l~~~L~~~~~~~~~~ 79 (195)
T 2nyi_A 4 QSFVVSVAGSDRVGIVHDFSWALKNISANVESSRMACLGGDFAM-IVLVSLNA-K--DGKLIQSALESALPGFQISTRRA 79 (195)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEE-EEEEEESS-S--SSHHHHHHHHHHSTTCEEEEEEC
T ss_pred eEEEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEECCeEEE-EEEEEecC-c--cchhHHHHHHHHHHHHHHhcCCe
Confidence 457899999999999999999999999999999996554 5776 66665432 1 2223567777777654311
Q ss_pred --------c-cCCceEEEEEecCCcchHHHHHHHHHhCCceEEEEEeeecC--CeeeeEEEEEcCCC
Q 048063 366 --------R-VCEGVRLELCAANRVGLLSDITRVLRENGLAVVRAHVATKG--EKSVNAFYLRDISG 421 (484)
Q Consensus 366 --------r-~~~~t~leV~a~DRpGLL~~It~~f~~~gi~I~~A~i~T~g--~~a~d~F~v~~~~g 421 (484)
. ....+.|+|.|.|||||++.||++|+++|+||..+++.|.+ +++++.|++...-+
T Consensus 80 ~~~~~~~~~~~~~~~iltv~g~DrpGiva~Vt~~La~~g~nI~~~~~~t~~~~~~~~~~F~m~~~~~ 146 (195)
T 2nyi_A 80 SSVAERHVSPDTREYELYVEGPDSEGIVEAVTAVLAKKGANIVELETETLPAPFAGFTLFRMGSRVA 146 (195)
T ss_dssp CCC----CCTTEEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEEECSSTTCEEEEEEEEEE
T ss_pred EEEEeCCcCCCCcEEEEEEEeCCCcCHHHHHHHHHHHcCCCEEEceeeecccccCCCCeEEEEEEEE
Confidence 0 11269999999999999999999999999999999999998 77899999876543
No 3
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.66 E-value=1.6e-15 Score=142.03 Aligned_cols=156 Identities=12% Similarity=0.122 Sum_probs=109.4
Q ss_pred eEEEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEeeCCCCCCCcHHHHHHHHHHHccCCC--CCCcc
Q 048063 37 CTVVKVDSVSKQGLLLEMVQVLTDMNLTISKSYISSDAGWFMDVFHVKDEHGNKLTDQKVINYIQQAIGTTGE--IPSSA 114 (484)
Q Consensus 37 ~t~I~V~~~DrpGLfa~ia~vL~~~glnI~~A~Itt~~g~~~d~F~V~d~~g~~~~~~~~~~~L~~~L~~~~~--~~~~~ 114 (484)
..+|+|+|+||||+|++++++|+++|+||+++++++..|.+.-.|.|..+ +..++.|++.|..... .-.+.
T Consensus 6 ~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~~~~f~~~~~v~~~-------~~~~~~l~~~L~~~~~~~~~~~~ 78 (192)
T 1u8s_A 6 HLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFTLLMLISGS-------PSNITRVETTLPLLGQQHDLITM 78 (192)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEEC-------HHHHHHHHHHHHHHHHHHTCEEE
T ss_pred EEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeecCCceEEEEEEecC-------CCCHHHHHHHHHHHHHhcCCEEE
Confidence 47899999999999999999999999999999997766766668888643 1245556655543110 00000
Q ss_pred ccccccceeeecCCCCCCeEEEEEEecCCCchHHHHHHHHHhCCCeEEEEEEEecCC----eeEEEEEEEeCCCCCCCCC
Q 048063 115 VAKTYTNKAVFGSEYPSEHTAIEMTGTDRPGLFSEISAALADLHCNIVEAHAWSHND----RLACVAYVSDQSTDTPIDD 190 (484)
Q Consensus 115 ~~~~~~~v~v~~~~~~~~~t~i~V~~~DrpGLL~~Ia~vL~~~glnI~~A~i~T~~~----~~~dvF~V~~~~~g~~i~d 190 (484)
....+. -.+......++|+|.++||||++++|+++|+++|+||.+++.+|.+. +..+.|+++.. .+.+ +
T Consensus 79 ~~~~~~----~~~~~~~~~~~l~v~~~D~~Gil~~v~~~l~~~~~nI~~~~~~t~~~~~~~~~~~~F~~~~~-~~~~--~ 151 (192)
T 1u8s_A 79 MKRTSP----HDHQTHAYTVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAIS-ARVD--S 151 (192)
T ss_dssp EEEECC----CCCCCCSEEEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEEC--------CEEEEEEE-EEEC--T
T ss_pred EEeCCC----CCCccCCceEEEEEEeCCCccHHHHHHHHHHHcCCcHHHhhhhcccCCccCCCCCEEEEEEE-EeCC--C
Confidence 000000 01133446789999999999999999999999999999999999874 56788988775 3332 2
Q ss_pred hhHHHHHHHHHHHHhc
Q 048063 191 PGRLATIEEYITTVLR 206 (484)
Q Consensus 191 ~~~~~~l~~~L~~~L~ 206 (484)
+...+.|+++|.....
T Consensus 152 ~~~~~~l~~~l~~~~~ 167 (192)
T 1u8s_A 152 GCNLMQLQEEFDALCT 167 (192)
T ss_dssp TSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH
Confidence 3356788888886543
No 4
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.64 E-value=3.9e-15 Score=139.42 Aligned_cols=121 Identities=16% Similarity=0.224 Sum_probs=95.3
Q ss_pred ceeEEEEEeCCCCchHHHHHHHHhhCCceEEEEEEEecCC-eEEEEEEEEccCCCCCCChhHHHHHHHHHHHHHh-----
Q 048063 291 GYSIVSVDCKDRPRLMFDTVCTLTDMQYVVFHASIGCHGD-YAFQEYFIRHIDGYALNTEGEKERVIKCLEAAIE----- 364 (484)
Q Consensus 291 ~~t~V~V~~~DrpgLl~~i~~~L~~~~l~I~~A~i~t~~g-~a~d~f~V~~~~g~~~~~~~~~e~l~~~L~~~l~----- 364 (484)
...+|+|+|+||||++++++.+|+++|+||.++++.+..| +++ .|.+... ....+.|++.|.+...
T Consensus 5 ~~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~~~~f~~-~~~v~~~-------~~~~~~l~~~L~~~~~~~~~~ 76 (192)
T 1u8s_A 5 QHLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFTL-LMLISGS-------PSNITRVETTLPLLGQQHDLI 76 (192)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEE-EEEEEEC-------HHHHHHHHHHHHHHHHHHTCE
T ss_pred cEEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeecCCceEE-EEEEecC-------CCCHHHHHHHHHHHHHhcCCE
Confidence 3578999999999999999999999999999999966665 444 6666432 1356777777766442
Q ss_pred ---hccC--------CceEEEEEecCCcchHHHHHHHHHhCCceEEEEEeeecCC----eeeeEEEEEcC
Q 048063 365 ---RRVC--------EGVRLELCAANRVGLLSDITRVLRENGLAVVRAHVATKGE----KSVNAFYLRDI 419 (484)
Q Consensus 365 ---rr~~--------~~t~leV~a~DRpGLL~~It~~f~~~gi~I~~A~i~T~g~----~a~d~F~v~~~ 419 (484)
++.+ ..++|+|.+.||||++++|+++|+++|+||.+++..|.++ ++++.|+++..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~l~v~~~D~~Gil~~v~~~l~~~~~nI~~~~~~t~~~~~~~~~~~~F~~~~~ 146 (192)
T 1u8s_A 77 TMMKRTSPHDHQTHAYTVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAIS 146 (192)
T ss_dssp EEEEEECCCCCCCCSEEEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEEC--------CEEEEEEE
T ss_pred EEEEeCCCCCCccCCceEEEEEEeCCCccHHHHHHHHHHHcCCcHHHhhhhcccCCccCCCCCEEEEEEE
Confidence 1111 2589999999999999999999999999999999999985 58999998664
No 5
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=98.84 E-value=8.2e-08 Score=99.65 Aligned_cols=154 Identities=12% Similarity=0.052 Sum_probs=100.7
Q ss_pred CeEEEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEeeCCCCCCCcHHHHHHHHHHHccCCC--CCCc
Q 048063 36 DCTVVKVDSVSKQGLLLEMVQVLTDMNLTISKSYISSDAGWFMDVFHVKDEHGNKLTDQKVINYIQQAIGTTGE--IPSS 113 (484)
Q Consensus 36 ~~t~I~V~~~DrpGLfa~ia~vL~~~glnI~~A~Itt~~g~~~d~F~V~d~~g~~~~~~~~~~~L~~~L~~~~~--~~~~ 113 (484)
...+|+|.|+|||||.+.++++|+++|+||++++.+..+|++.-...+.-+... . ..+.|++.|..... .-.+
T Consensus 11 ~~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~~~~~f~~~~~~~~~~~~-~----~~~~l~~~l~~~~~~~~~~~ 85 (415)
T 3p96_A 11 VSVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVVIRHRLTLGVLVCCPADV-A----DGPALRHDVEAAIRKVGLDV 85 (415)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEEETTEEEEEEEEEECHHH-H----TSHHHHHHHHHHHHHTTCEE
T ss_pred CeEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEEECCEeEEEEEEEecCCc-C----CHHHHHHHHHHHHHHcCeEE
Confidence 457899999999999999999999999999999998888887666555432110 0 12444444432100 0001
Q ss_pred cccccccceeeecCCCCCCeEEEEEEecC-CCchHHHHHHHHHhCCCeEEEEEEEecCCeeEEEEEEEeCCCCCCCCChh
Q 048063 114 AVAKTYTNKAVFGSEYPSEHTAIEMTGTD-RPGLFSEISAALADLHCNIVEAHAWSHNDRLACVAYVSDQSTDTPIDDPG 192 (484)
Q Consensus 114 ~~~~~~~~v~v~~~~~~~~~t~i~V~~~D-rpGLL~~Ia~vL~~~glnI~~A~i~T~~~~~~dvF~V~~~~~g~~i~d~~ 192 (484)
.......... .....+..+++.++| ++|++.+|+.+|+.+|+||.+.+..+....+.-.|++..+ + .
T Consensus 86 ~~~~~~~~~~----~~~~~~~~~~llg~~~~~~~~~~i~~~l~~~~~Ni~~l~~~~~~~~~~~~~~v~~~----~----~ 153 (415)
T 3p96_A 86 SIERSDDVPI----IREPSTHTIFVLGRPITAAAFGAVAREVAALGVNIDLIRGVSDYPVIGLELRVSVP----P----G 153 (415)
T ss_dssp EEEECSSSCS----SCCCCSEEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEEEESSSSEEEEEEEECC----T----T
T ss_pred EEEECCcccc----cCCCCcEEEEEEeCCCCHHHHHHHHHHHHHcCCCccceeeccCCCceEEEEEeeCC----C----C
Confidence 0000001011 133468899999999 9999999999999999999999887743333333666433 1 1
Q ss_pred HHHHHHHHHHHHhc
Q 048063 193 RLATIEEYITTVLR 206 (484)
Q Consensus 193 ~~~~l~~~L~~~L~ 206 (484)
..+.+++.|.+.+.
T Consensus 154 ~~~~l~~~l~~l~~ 167 (415)
T 3p96_A 154 ADEALRTALNRVSS 167 (415)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhh
Confidence 23566777666543
No 6
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=98.67 E-value=3.9e-07 Score=94.56 Aligned_cols=123 Identities=7% Similarity=-0.047 Sum_probs=86.5
Q ss_pred ceeEEEEEeCCCCchHHHHHHHHhhCCceEEEEEEEecCCeEEEEEEEEccCCCCCCChhHHHHHHHHHHH---HHh---
Q 048063 291 GYSIVSVDCKDRPRLMFDTVCTLTDMQYVVFHASIGCHGDYAFQEYFIRHIDGYALNTEGEKERVIKCLEA---AIE--- 364 (484)
Q Consensus 291 ~~t~V~V~~~DrpgLl~~i~~~L~~~~l~I~~A~i~t~~g~a~d~f~V~~~~g~~~~~~~~~e~l~~~L~~---~l~--- 364 (484)
...+|+|.|+||||+++.+++.|+++||||.+++..+.+|+. |+.+..+.... ...++.|++.|.. .+.
T Consensus 11 ~~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~~~~~f---~~~~~~~~~~~--~~~~~~l~~~l~~~~~~~~~~~ 85 (415)
T 3p96_A 11 VSVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVVIRHRL---TLGVLVCCPAD--VADGPALRHDVEAAIRKVGLDV 85 (415)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEEETTEE---EEEEEEEECHH--HHTSHHHHHHHHHHHHHTTCEE
T ss_pred CeEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEEECCEe---EEEEEEEecCC--cCCHHHHHHHHHHHHHHcCeEE
Confidence 456899999999999999999999999999999997777743 22222221100 0012455555543 231
Q ss_pred ------h--ccC--CceEEEEEecC-CcchHHHHHHHHHhCCceEEEEEeeecCCeeeeEEEEEc
Q 048063 365 ------R--RVC--EGVRLELCAAN-RVGLLSDITRVLRENGLAVVRAHVATKGEKSVNAFYLRD 418 (484)
Q Consensus 365 ------r--r~~--~~t~leV~a~D-RpGLL~~It~~f~~~gi~I~~A~i~T~g~~a~d~F~v~~ 418 (484)
. +.+ .++.+++.+.| +||++.+|+.+|.++|+||...+.-+......=.|++.-
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~llg~~~~~~~~~~i~~~l~~~~~Ni~~l~~~~~~~~~~~~~~v~~ 150 (415)
T 3p96_A 86 SIERSDDVPIIREPSTHTIFVLGRPITAAAFGAVAREVAALGVNIDLIRGVSDYPVIGLELRVSV 150 (415)
T ss_dssp EEEECSSSCSSCCCCSEEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEEEESSSSEEEEEEEEC
T ss_pred EEEECCcccccCCCCcEEEEEEeCCCCHHHHHHHHHHHHHcCCCccceeeccCCCceEEEEEeeC
Confidence 0 111 26899999999 999999999999999999999887773333333366643
No 7
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=98.45 E-value=1.1e-05 Score=71.29 Aligned_cols=110 Identities=17% Similarity=0.164 Sum_probs=74.6
Q ss_pred EEEEEEecCCCcHHHHHHHHHHhCCceEEEEEEE-ecCCeEEEEEEEeeCCCCCCCcHHHHHHHHHHHccCCCCCCcccc
Q 048063 38 TVVKVDSVSKQGLLLEMVQVLTDMNLTISKSYIS-SDAGWFMDVFHVKDEHGNKLTDQKVINYIQQAIGTTGEIPSSAVA 116 (484)
Q Consensus 38 t~I~V~~~DrpGLfa~ia~vL~~~glnI~~A~It-t~~g~~~d~F~V~d~~g~~~~~~~~~~~L~~~L~~~~~~~~~~~~ 116 (484)
..|+|..+|+||.+++++++|++.|+||..-.+. +.+ ..+-.|.+.+ . +..++.|... .+.
T Consensus 7 ~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~~~~-~~~~~~~~~d--------~---~~a~~~L~~~----G~~-- 68 (144)
T 2f06_A 7 KQLSIFLENKSGRLTEVTEVLAKENINLSALCIAENAD-FGILRGIVSD--------P---DKAYKALKDN----HFA-- 68 (144)
T ss_dssp EEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEECSS-CEEEEEEESC--------H---HHHHHHHHHT----TCC--
T ss_pred EEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEecCC-CCEEEEEeCC--------H---HHHHHHHHHc----CCe--
Confidence 5889999999999999999999999999977664 333 1122344321 2 2223334322 121
Q ss_pred ccccceeeecCCCCCCeEEEEEEecCCCchHHHHHHHHHhCCCeEEEEEEEecCCeeEEEEE
Q 048063 117 KTYTNKAVFGSEYPSEHTAIEMTGTDRPGLFSEISAALADLHCNIVEAHAWSHNDRLACVAY 178 (484)
Q Consensus 117 ~~~~~v~v~~~~~~~~~t~i~V~~~DrpGLL~~Ia~vL~~~glnI~~A~i~T~~~~~~dvF~ 178 (484)
+. ...++.+..+|+||.+++++++|+++|+||.....+..+....-+|.
T Consensus 69 -----v~--------~~svv~v~~~d~pGvla~i~~~L~~~~InI~~~~~~~~~~~~~~~i~ 117 (144)
T 2f06_A 69 -----VN--------ITDVVGISCPNVPGALAKVLGFLSAEGVFIEYMYSFANNNVANVVIR 117 (144)
T ss_dssp -----EE--------EEEEEEEEEESSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEE
T ss_pred -----Ee--------eeeEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEEccCCcEEEEEE
Confidence 11 12467778899999999999999999999988776633344444443
No 8
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=98.27 E-value=2.6e-05 Score=68.87 Aligned_cols=112 Identities=11% Similarity=0.099 Sum_probs=72.8
Q ss_pred eEEEEEeCCCCchHHHHHHHHhhCCceEEEEEEEecCCeEEEEEEEEccCCCCCCChhHHHHHHHHHHHHHhhccCCceE
Q 048063 293 SIVSVDCKDRPRLMFDTVCTLTDMQYVVFHASIGCHGDYAFQEYFIRHIDGYALNTEGEKERVIKCLEAAIERRVCEGVR 372 (484)
Q Consensus 293 t~V~V~~~DrpgLl~~i~~~L~~~~l~I~~A~i~t~~g~a~d~f~V~~~~g~~~~~~~~~e~l~~~L~~~l~rr~~~~t~ 372 (484)
..+.|..+|+||.+++++..|++.|+||..-.+....++..-.|.+ ++ .+..++.|++. .-......+
T Consensus 7 ~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~~~~~~~~~~~~--------~d---~~~a~~~L~~~-G~~v~~~sv 74 (144)
T 2f06_A 7 KQLSIFLENKSGRLTEVTEVLAKENINLSALCIAENADFGILRGIV--------SD---PDKAYKALKDN-HFAVNITDV 74 (144)
T ss_dssp EEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEE--------SC---HHHHHHHHHHT-TCCEEEEEE
T ss_pred EEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEecCCCCEEEEEe--------CC---HHHHHHHHHHc-CCeEeeeeE
Confidence 4678899999999999999999999999987774322222112321 12 22333333331 000111245
Q ss_pred EEEEecCCcchHHHHHHHHHhCCceEEEEEeeecCCeeeeEEEE
Q 048063 373 LELCAANRVGLLSDITRVLRENGLAVVRAHVATKGEKSVNAFYL 416 (484)
Q Consensus 373 leV~a~DRpGLL~~It~~f~~~gi~I~~A~i~T~g~~a~d~F~v 416 (484)
+-+.-.|+||.+++++++|+++||||.+......+.++.=.|-.
T Consensus 75 v~v~~~d~pGvla~i~~~L~~~~InI~~~~~~~~~~~~~~~i~~ 118 (144)
T 2f06_A 75 VGISCPNVPGALAKVLGFLSAEGVFIEYMYSFANNNVANVVIRP 118 (144)
T ss_dssp EEEEEESSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEE
T ss_pred EEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEEccCCcEEEEEEe
Confidence 66677899999999999999999999876654233444444444
No 9
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=98.09 E-value=2e-05 Score=63.76 Aligned_cols=67 Identities=18% Similarity=0.287 Sum_probs=52.6
Q ss_pred CeEEEEEEecCCCchHHHHHHHHHhCCCeEEEEEEEecCCeeEEEEEEEeCCCCCCCCChhHHHHHHHHHHHHh
Q 048063 132 EHTAIEMTGTDRPGLFSEISAALADLHCNIVEAHAWSHNDRLACVAYVSDQSTDTPIDDPGRLATIEEYITTVL 205 (484)
Q Consensus 132 ~~t~i~V~~~DrpGLL~~Ia~vL~~~glnI~~A~i~T~~~~~~dvF~V~~~~~g~~i~d~~~~~~l~~~L~~~L 205 (484)
..+.|+|.++||||++++|+++|+++|+||.+....+..+.+.-.+.+.-+ + ...++.|.+.|.+..
T Consensus 4 ~~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~~~~~~~~i~v~~~--~-----~~~l~~l~~~L~~~~ 70 (91)
T 1zpv_A 4 MKAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLDEYFTMMAVVSSD--E-----KQDFTYLRNEFEAFG 70 (91)
T ss_dssp EEEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEES--S-----CCCHHHHHHHHHHHH
T ss_pred ceEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEEcCEEEEEEEEEeC--C-----CCCHHHHHHHHHHHH
Confidence 357899999999999999999999999999999998876666666666443 2 124577888877643
No 10
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=97.92 E-value=8.3e-05 Score=60.01 Aligned_cols=50 Identities=14% Similarity=0.231 Sum_probs=43.4
Q ss_pred eEEEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEeeC
Q 048063 37 CTVVKVDSVSKQGLLLEMVQVLTDMNLTISKSYISSDAGWFMDVFHVKDE 86 (484)
Q Consensus 37 ~t~I~V~~~DrpGLfa~ia~vL~~~glnI~~A~Itt~~g~~~d~F~V~d~ 86 (484)
...|+|.++||||++++++++|+++|+||.+....+.+|.+.-.+.+.-+
T Consensus 5 ~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~~~~~~~~i~v~~~ 54 (91)
T 1zpv_A 5 KAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLDEYFTMMAVVSSD 54 (91)
T ss_dssp EEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEES
T ss_pred eEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEEcCEEEEEEEEEeC
Confidence 46899999999999999999999999999999987766887777777433
No 11
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=97.84 E-value=7.9e-05 Score=59.48 Aligned_cols=63 Identities=16% Similarity=0.334 Sum_probs=47.3
Q ss_pred CeEEEEEEecCCCchHHHHHHHHHhCCCeEEEEEEEecCCeeEEEEEEEeCCCCCCCCChhHHHHHHHHH
Q 048063 132 EHTAIEMTGTDRPGLFSEISAALADLHCNIVEAHAWSHNDRLACVAYVSDQSTDTPIDDPGRLATIEEYI 201 (484)
Q Consensus 132 ~~t~i~V~~~DrpGLL~~Ia~vL~~~glnI~~A~i~T~~~~~~dvF~V~~~~~g~~i~d~~~~~~l~~~L 201 (484)
-.+.|.|.+.||||+|++|+++|++.|+||.+..+.+.++.+...|.+... +...++++.+.|
T Consensus 4 ~~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~~~~~~~~i~v~~~-------~~~~l~~l~~~L 66 (88)
T 2ko1_A 4 FLAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAKDGIFTCNLMIFVK-------NTDKLTTLMDKL 66 (88)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEECSSEEEEEEEEEES-------SHHHHHHHHHHH
T ss_pred EEEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEcCCEEEEEEEEEEC-------CHHHHHHHHHHH
Confidence 357889999999999999999999999999999998866544455555443 234455554443
No 12
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=97.74 E-value=0.00013 Score=58.22 Aligned_cols=62 Identities=10% Similarity=0.142 Sum_probs=48.2
Q ss_pred ceEEEEEecCCcchHHHHHHHHHhCCceEEEEEeeecCCeeeeEEEEEcCCCCCCChHHHHHHHHHh
Q 048063 370 GVRLELCAANRVGLLSDITRVLRENGLAVVRAHVATKGEKSVNAFYLRDISGNEVDMDFVESMKKEI 436 (484)
Q Consensus 370 ~t~leV~a~DRpGLL~~It~~f~~~gi~I~~A~i~T~g~~a~d~F~v~~~~g~~l~~~~~~~l~~~L 436 (484)
.+.|.|.+.||||+|++|+.+|+++|+||.++++.+.++.+...|.+.-. +.+..+++.++|
T Consensus 5 ~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~~~~~~~~i~v~~~-----~~~~l~~l~~~L 66 (88)
T 2ko1_A 5 LAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAKDGIFTCNLMIFVK-----NTDKLTTLMDKL 66 (88)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEECSSEEEEEEEEEES-----SHHHHHHHHHHH
T ss_pred EEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEcCCEEEEEEEEEEC-----CHHHHHHHHHHH
Confidence 46789999999999999999999999999999998876655556655432 234556666666
No 13
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=97.72 E-value=0.025 Score=61.43 Aligned_cols=296 Identities=11% Similarity=0.117 Sum_probs=168.0
Q ss_pred eEEEEEE-ecCCCcHHHHHHHHHHhCCceEEEEEEE-ecCCeEEEEEEEeeCCCCCCCcHHHHHHHHHHHccCCCCCCcc
Q 048063 37 CTVVKVD-SVSKQGLLLEMVQVLTDMNLTISKSYIS-SDAGWFMDVFHVKDEHGNKLTDQKVINYIQQAIGTTGEIPSSA 114 (484)
Q Consensus 37 ~t~I~V~-~~DrpGLfa~ia~vL~~~glnI~~A~It-t~~g~~~d~F~V~d~~g~~~~~~~~~~~L~~~L~~~~~~~~~~ 114 (484)
.+.|++. .++.||..+++-..|+++|+||.--..+ +.+|..--.|.|...+- +...+.+++ +..... .+.
T Consensus 270 ~~~i~i~~~~~~~g~~~~if~~La~~~I~Vd~I~qs~~~~~~~~Isftv~~~~~-----~~a~~~l~~-~~~el~-~~~- 341 (600)
T 3l76_A 270 QAKVALLRVPDRPGVASKLFRDIAQQQVDIDLIIQSIHDGNSNDIAFTVVKDLL-----NTAEAVTSA-IAPALR-SYP- 341 (600)
T ss_dssp CEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEEBCCCBTTEEEEEEEECGGGH-----HHHHHHHHH-HGGGGS-SST-
T ss_pred EEEEEEeCCCCcccHHHHHHHHHHHcCCCEEEEEeeccCCCCceEEEEEeHHHH-----HHHHHHHHH-HHHHhh-ccc-
Confidence 3455554 5799999999999999999999532221 24565555677753211 111122222 222110 000
Q ss_pred ccccccceeeecCCCCCCeEEEEEEec---CCCchHHHHHHHHHhCCCeEEEEEEEecCCeeEEEEEEEeCCCCCCCCCh
Q 048063 115 VAKTYTNKAVFGSEYPSEHTAIEMTGT---DRPGLFSEISAALADLHCNIVEAHAWSHNDRLACVAYVSDQSTDTPIDDP 191 (484)
Q Consensus 115 ~~~~~~~v~v~~~~~~~~~t~i~V~~~---DrpGLL~~Ia~vL~~~glnI~~A~i~T~~~~~~dvF~V~~~~~g~~i~d~ 191 (484)
+......+. + ..+...|.|.+. .+||+.+++..+|+++|+||.... |.. .--.|.|...
T Consensus 342 ~~~~~~~v~-~----~~~~a~VsvVG~gm~~~~Gv~a~if~aL~~~~Ini~~is--tSe--~~Is~vI~~~--------- 403 (600)
T 3l76_A 342 EADQEAEII-V----EKGIAKIAIAGAGMIGRPGIAAKMFKTLADVGVNIEMIS--TSE--VKVSCVIDQR--------- 403 (600)
T ss_dssp TCSSSSEEE-E----ECSEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCCCEEE--ECS--SEEEEEEEGG---------
T ss_pred cccCcceeE-e----cCCeEEEEEECCCcccCccHHHHHHHHHHhCCCcEEEEe--cCC--CEEEEEEcHH---------
Confidence 000012333 2 236788999886 799999999999999999997765 322 2333444432
Q ss_pred hHHHHHHHHHHHHhcccccCCCCcccccccccccCCCCCCCCccchhhhhhhhhhhcccccCCCCCCCCCCCCCCCCCCC
Q 048063 192 GRLATIEEYITTVLRATAERSPSETHINPLQVKANGFPCGDCIKTNVERRLHQLMLSVRDFDGQCGPNMSRSTPSSAVGF 271 (484)
Q Consensus 192 ~~~~~l~~~L~~~L~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (484)
..++..++|++.+..... +++.++ .+ +
T Consensus 404 -d~~~Av~aLh~~f~~~~t----------------~~~~~~--------~~---~------------------------- 430 (600)
T 3l76_A 404 -DADRAIAALSNAFGVTLS----------------PPKNQT--------DT---S------------------------- 430 (600)
T ss_dssp -GHHHHHHHHHHHTTCCBC----------------CCCCCC--------C------------------------------
T ss_pred -HHHHHHHHHHHhhcccCC----------------Cccccc--------cc---c-------------------------
Confidence 335555666666643210 000000 00 0
Q ss_pred CCCCCCcceEEEEeccCCCceeEEEE-EeCCCCchHHHHHHHHhhCCceEEEEEEEe----cCC--eEEEEEEEEccCCC
Q 048063 272 GDEEGMRRTAVYIESCEEKGYSIVSV-DCKDRPRLMFDTVCTLTDMQYVVFHASIGC----HGD--YAFQEYFIRHIDGY 344 (484)
Q Consensus 272 ~~~~~~~~p~V~v~n~~~~~~t~V~V-~~~DrpgLl~~i~~~L~~~~l~I~~A~i~t----~~g--~a~d~f~V~~~~g~ 344 (484)
....-..|..+ .+...|.+ ..+|+||+.+++...|++.|+||---..+. +.| ..--+|.+..
T Consensus 431 ---~~~~v~Gia~~----~~~a~i~i~~~~~~~g~~~~if~~La~~~I~vDmI~q~~~~~~~~g~~~~~isftv~~---- 499 (600)
T 3l76_A 431 ---HLPAVRGVALD----QDQAQIAIRHVPDRPGMAAQLFTALAEANISVDMIIQSQRCRINQGTPCRDIAFMVAE---- 499 (600)
T ss_dssp ----CCSCCEEEEE----CSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCEEEEEEECCCSSSSCEEEEEEEEEH----
T ss_pred ---ccCceEEEEee----CCEEEEEEecCCCCccHHHHHHHHHHHcCCcEEEEEecccccccCCCccceEEEEEeH----
Confidence 00111233332 34455555 459999999999999999999994322221 124 2333465533
Q ss_pred CCCChhHHHHHHHHHHHHHhhcc--------CCceEEEEEec---CCcchHHHHHHHHHhCCceEEEEEeeecCCeeeeE
Q 048063 345 ALNTEGEKERVIKCLEAAIERRV--------CEGVRLELCAA---NRVGLLSDITRVLRENGLAVVRAHVATKGEKSVNA 413 (484)
Q Consensus 345 ~~~~~~~~e~l~~~L~~~l~rr~--------~~~t~leV~a~---DRpGLL~~It~~f~~~gi~I~~A~i~T~g~~a~d~ 413 (484)
..++...+.|++ ++... +....|.|.+. .+||+.+.+-++|.+.||||.... |. ...=.
T Consensus 500 -----~d~~~a~~~l~~-~~~~~~~~~v~~~~~~akVSiVG~GM~~~~Gvaa~~f~aL~~~~Ini~mis--tS--Ei~Is 569 (600)
T 3l76_A 500 -----GDSSQAEAILQP-LIKDWLDAAIVVNKAIAKVSIVGSGMIGHPGVAAHFFAALAQENINIEMIA--TS--EIKIS 569 (600)
T ss_dssp -----HHHHHHHHHHHH-HTTTSTTCEEEEECCEEEEEEECGGGTTCTTHHHHHHHHHHTTTCCCCEEE--EC--SSEEE
T ss_pred -----HHHHHHHHHHHH-HHHhcCCceEEEeCCeEEEEEECcccccCccHHHHHHHHHHHCCCceEEEE--cC--CceEE
Confidence 233344444443 22111 22578888874 899999999999999999998877 22 12334
Q ss_pred EEEEcCCCCCCChHHHHHHHHHh
Q 048063 414 FYLRDISGNEVDMDFVESMKKEI 436 (484)
Q Consensus 414 F~v~~~~g~~l~~~~~~~l~~~L 436 (484)
+.|...+. +..+..|.+++
T Consensus 570 ~vV~~~~~----~~Av~alh~~F 588 (600)
T 3l76_A 570 CVVPQDRG----VDALKAAHSAF 588 (600)
T ss_dssp EEEEGGGH----HHHHHHHHHHT
T ss_pred EEEeHHHH----HHHHHHHHHHh
Confidence 55643311 23567777777
No 14
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=97.46 E-value=0.0012 Score=59.73 Aligned_cols=130 Identities=13% Similarity=0.126 Sum_probs=83.0
Q ss_pred CceeEEEEE-eCCCCchHHHHHHHHhhCCceEEEEEE-EecCCeEEEEEEEEccCCCCCCChhHHHHHHHHHHHH---Hh
Q 048063 290 KGYSIVSVD-CKDRPRLMFDTVCTLTDMQYVVFHASI-GCHGDYAFQEYFIRHIDGYALNTEGEKERVIKCLEAA---IE 364 (484)
Q Consensus 290 ~~~t~V~V~-~~DrpgLl~~i~~~L~~~~l~I~~A~i-~t~~g~a~d~f~V~~~~g~~~~~~~~~e~l~~~L~~~---l~ 364 (484)
.+...|.|. .+|+||.++++...|++.|+||..-.. .+.+|...-+|+|... ..++..+.|++. +.
T Consensus 23 ~~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~i~~s~~~~g~~~isf~v~~~---------~~~~a~~~l~~~~~~l~ 93 (167)
T 2re1_A 23 KNQARINVRGVPDKPGVAYQILGAVADANIEVDMIIQNVGSEGTTDFSFTVPRG---------DYKQTLEILSERQDSIG 93 (167)
T ss_dssp CCCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCCEEEC----CEEEEEEEECGG---------GHHHHHHHHHHSSTTTT
T ss_pred CCEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEEEEcCCCCCCeeEEEEEEech---------HHHHHHHHHHHHHHHcC
Confidence 356778888 499999999999999999999987665 2334543445666431 122333333331 21
Q ss_pred h----ccCCceEEEEEecC---CcchHHHHHHHHHhCCceEEEEEeeecCCeeeeEEEEEcCCCCCCChHHHHHHHHHh
Q 048063 365 R----RVCEGVRLELCAAN---RVGLLSDITRVLRENGLAVVRAHVATKGEKSVNAFYLRDISGNEVDMDFVESMKKEI 436 (484)
Q Consensus 365 r----r~~~~t~leV~a~D---RpGLL~~It~~f~~~gi~I~~A~i~T~g~~a~d~F~v~~~~g~~l~~~~~~~l~~~L 436 (484)
- -....+.+.|.+.+ +||+++.+.++|.++||||.... |. ...-.|++...+. ...++.|.+++
T Consensus 94 ~~~i~~~~~~a~vsvvG~~m~~~~Gv~a~i~~aL~~~~InI~~is--ts--e~~is~vv~~~d~----~~av~~Lh~~f 164 (167)
T 2re1_A 94 AASIDGDDTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQMIS--TS--EIKVSVLIDEKYM----ELATRVLHKAF 164 (167)
T ss_dssp CSEEEEESSEEEEEEECSSCTTCCCHHHHHHHHHHHTTCCCCEEE--EC--SSEEEEEEEGGGH----HHHHHHHHHHT
T ss_pred CceEEecCCEEEEEEECCCcCCCcCHHHHHHHHHHHCCCcEEEEE--cc--cCEEEEEEeHHHH----HHHHHHHHHHh
Confidence 1 01125889999987 99999999999999999999953 42 2233455533211 23456666665
No 15
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=97.42 E-value=0.0017 Score=58.65 Aligned_cols=109 Identities=16% Similarity=0.156 Sum_probs=73.7
Q ss_pred CeEEEEEE-ecCCCcHHHHHHHHHHhCCceEEEEEEE-ecCCeEEEEEEEeeCCCCCCCcHHHHHHHHHHHccCCCCCCc
Q 048063 36 DCTVVKVD-SVSKQGLLLEMVQVLTDMNLTISKSYIS-SDAGWFMDVFHVKDEHGNKLTDQKVINYIQQAIGTTGEIPSS 113 (484)
Q Consensus 36 ~~t~I~V~-~~DrpGLfa~ia~vL~~~glnI~~A~It-t~~g~~~d~F~V~d~~g~~~~~~~~~~~L~~~L~~~~~~~~~ 113 (484)
+.+.|+|. .+|+||.++++..+|+++|+||.--..+ +.+|...-.|.|... +. +...+.|..... .+
T Consensus 24 ~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~i~~s~~~~g~~~isf~v~~~------~~---~~a~~~l~~~~~--~l 92 (167)
T 2re1_A 24 NQARINVRGVPDKPGVAYQILGAVADANIEVDMIIQNVGSEGTTDFSFTVPRG------DY---KQTLEILSERQD--SI 92 (167)
T ss_dssp CCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCCEEEC----CEEEEEEEECGG------GH---HHHHHHHHHSST--TT
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEEEEcCCCCCCeeEEEEEEech------HH---HHHHHHHHHHHH--Hc
Confidence 56788888 5999999999999999999999865442 234644455777531 11 222233332210 11
Q ss_pred cccccccceeeecCCCCCCeEEEEEEecC---CCchHHHHHHHHHhCCCeEEEE
Q 048063 114 AVAKTYTNKAVFGSEYPSEHTAIEMTGTD---RPGLFSEISAALADLHCNIVEA 164 (484)
Q Consensus 114 ~~~~~~~~v~v~~~~~~~~~t~i~V~~~D---rpGLL~~Ia~vL~~~glnI~~A 164 (484)
. ...+. + ..+...+.|.+.+ +||.++++..+|+++|+||...
T Consensus 93 ~----~~~i~-~----~~~~a~vsvvG~~m~~~~Gv~a~i~~aL~~~~InI~~i 137 (167)
T 2re1_A 93 G----AASID-G----DDTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQMI 137 (167)
T ss_dssp T----CSEEE-E----ESSEEEEEEECSSCTTCCCHHHHHHHHHHHTTCCCCEE
T ss_pred C----CceEE-e----cCCEEEEEEECCCcCCCcCHHHHHHHHHHHCCCcEEEE
Confidence 0 11233 2 2368899999987 9999999999999999999884
No 16
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=97.33 E-value=0.0034 Score=62.36 Aligned_cols=49 Identities=18% Similarity=0.356 Sum_probs=41.9
Q ss_pred CeEEEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEec--CCeEEEEEEEe
Q 048063 36 DCTVVKVDSVSKQGLLLEMVQVLTDMNLTISKSYISSD--AGWFMDVFHVK 84 (484)
Q Consensus 36 ~~t~I~V~~~DrpGLfa~ia~vL~~~glnI~~A~Itt~--~g~~~d~F~V~ 84 (484)
....++|.|+|||||.++++++|+++|+||.+++.+++ .|++.-...+.
T Consensus 21 ~~~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~~~g~FfMr~~~~ 71 (302)
T 3o1l_A 21 RTFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDNLSGWFFMRHEIR 71 (302)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTTEEEEEEEEE
T ss_pred ceEEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecCCCCeEEEEEEEe
Confidence 34789999999999999999999999999999998764 78776555553
No 17
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=97.32 E-value=0.0068 Score=59.77 Aligned_cols=118 Identities=8% Similarity=0.081 Sum_probs=72.1
Q ss_pred eEEEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEe--cCCeEEEEEEEeeCCCCCCCcHHHHHHHHHHHccCCCCCCcc
Q 048063 37 CTVVKVDSVSKQGLLLEMVQVLTDMNLTISKSYISS--DAGWFMDVFHVKDEHGNKLTDQKVINYIQQAIGTTGEIPSSA 114 (484)
Q Consensus 37 ~t~I~V~~~DrpGLfa~ia~vL~~~glnI~~A~Itt--~~g~~~d~F~V~d~~g~~~~~~~~~~~L~~~L~~~~~~~~~~ 114 (484)
...++|.|+|||||.++++++|+++|+||.+.+.++ ..|++.-...+.-+.+. .. .+.|++.|.... ..+
T Consensus 6 ~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~-~~----~~~L~~~f~~la--~~~- 77 (288)
T 3obi_A 6 QYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNAAAKV-IP----LASLRTGFGVIA--AKF- 77 (288)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEESSCC-CC----HHHHHHHHHHHH--HHT-
T ss_pred eEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCceEEEEEEEcCCCC-CC----HHHHHHHHHHHH--HHc-
Confidence 468999999999999999999999999999999754 57777655555433221 22 244444443211 011
Q ss_pred ccccccceeeecCCCCCCeEEEEEEecCCCchHHHHHHHHHhCCCeEEEEEEEec
Q 048063 115 VAKTYTNKAVFGSEYPSEHTAIEMTGTDRPGLFSEISAALADLHCNIVEAHAWSH 169 (484)
Q Consensus 115 ~~~~~~~v~v~~~~~~~~~t~i~V~~~DrpGLL~~Ia~vL~~~glnI~~A~i~T~ 169 (484)
..++. +..... ...|-|...-+---|.+|......-.+++.-+-+.+.
T Consensus 78 ----~m~~~-l~~~~~--~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~i~~Visn 125 (288)
T 3obi_A 78 ----TMGWH-MRDRET--RRKVMLLVSQSDHCLADILYRWRVGDLHMIPTAIVSN 125 (288)
T ss_dssp ----TCEEE-EEETTS--CEEEEEEECSCCHHHHHHHHHHHTTSSCEEEEEEEES
T ss_pred ----CCEEE-eeccCC--CcEEEEEEcCCCCCHHHHHHHHHCCCCCeEEEEEEcC
Confidence 11222 222222 3334444444455777777777776676665555553
No 18
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=97.23 E-value=0.0084 Score=59.09 Aligned_cols=117 Identities=12% Similarity=0.048 Sum_probs=69.9
Q ss_pred CeEEEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEe--cCCeEEEEEEEeeCCCCCCCcHHHHHHHHHHHccCCCCCCc
Q 048063 36 DCTVVKVDSVSKQGLLLEMVQVLTDMNLTISKSYISS--DAGWFMDVFHVKDEHGNKLTDQKVINYIQQAIGTTGEIPSS 113 (484)
Q Consensus 36 ~~t~I~V~~~DrpGLfa~ia~vL~~~glnI~~A~Itt--~~g~~~d~F~V~d~~g~~~~~~~~~~~L~~~L~~~~~~~~~ 113 (484)
....+++.|+|||||.++++++|+++|+||.+++.++ ..|++.-...+.. ++.. .+.|++.|.... ..+
T Consensus 6 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~-~~~~------~~~L~~~f~~la--~~~ 76 (287)
T 3nrb_A 6 NQYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDEDSSKFFMRVSVEI-PVAG------VNDFNSAFGKVV--EKY 76 (287)
T ss_dssp TEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEEC-CC---------CHHHHHHHHHH--GGG
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecCCCCeEEEEEEEEc-CCCC------HHHHHHHHHHHH--HHc
Confidence 4578999999999999999999999999999999864 5777765444432 2211 224444443211 012
Q ss_pred cccccccceeeecCCCCCCeEEEEEEecCCCchHHHHHHHHHhCCCeEEEEEEEec
Q 048063 114 AVAKTYTNKAVFGSEYPSEHTAIEMTGTDRPGLFSEISAALADLHCNIVEAHAWSH 169 (484)
Q Consensus 114 ~~~~~~~~v~v~~~~~~~~~t~i~V~~~DrpGLL~~Ia~vL~~~glnI~~A~i~T~ 169 (484)
..++. +.....+....|-+++ +---|.+|......-.+++.-+-+.+.
T Consensus 77 -----~m~~~-l~~~~~~~ri~vl~Sg--~g~nl~~ll~~~~~g~l~~~i~~Visn 124 (287)
T 3nrb_A 77 -----NAEWW-FRPRTDRKKVVIMVSK--FDHCLGDLLYRHRLGELDMEVVGIISN 124 (287)
T ss_dssp -----TCEEE-EEETTCCCEEEEEECS--CCHHHHHHHHHHHHTSSCCEEEEEEES
T ss_pred -----CCeeE-eeccCCCcEEEEEEeC--CCcCHHHHHHHHHCCCCCeEEEEEEeC
Confidence 12233 3322223333444444 345677777777766666655555553
No 19
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=97.22 E-value=0.0076 Score=59.36 Aligned_cols=48 Identities=13% Similarity=0.136 Sum_probs=40.9
Q ss_pred eEEEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEe--cCCeEEEEEEEe
Q 048063 37 CTVVKVDSVSKQGLLLEMVQVLTDMNLTISKSYISS--DAGWFMDVFHVK 84 (484)
Q Consensus 37 ~t~I~V~~~DrpGLfa~ia~vL~~~glnI~~A~Itt--~~g~~~d~F~V~ 84 (484)
...++|.|+|||||.++++++|+++|+||.+.+.++ ..|++.-...+.
T Consensus 8 ~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~ 57 (286)
T 3n0v_A 8 TWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDDRQSGRFFIRVEFR 57 (286)
T ss_dssp CEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEE
T ss_pred cEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeeccCCCCeeEEEEEEe
Confidence 478999999999999999999999999999999875 567776554443
No 20
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=97.16 E-value=0.008 Score=59.38 Aligned_cols=48 Identities=13% Similarity=0.090 Sum_probs=40.9
Q ss_pred CeEEEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEe--cCCeEEEEEEE
Q 048063 36 DCTVVKVDSVSKQGLLLEMVQVLTDMNLTISKSYISS--DAGWFMDVFHV 83 (484)
Q Consensus 36 ~~t~I~V~~~DrpGLfa~ia~vL~~~glnI~~A~Itt--~~g~~~d~F~V 83 (484)
....+++.|+|||||.++++++|+++|+||.+++.++ ..|++.-...+
T Consensus 9 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~ 58 (292)
T 3lou_A 9 HQFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDDDLSARFFVRCVF 58 (292)
T ss_dssp CEEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEE
T ss_pred CcEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEecCCCCceEEEEEE
Confidence 3578999999999999999999999999999999875 56777644444
No 21
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=97.08 E-value=0.026 Score=51.36 Aligned_cols=139 Identities=15% Similarity=0.203 Sum_probs=86.6
Q ss_pred CCeEEEEE-EecCCCcHHHHHHHHHHhCCceEEEEEEEec---CCeEEEEEEEeeCCCCCCCcHHHHHHHHHHHccCCCC
Q 048063 35 EDCTVVKV-DSVSKQGLLLEMVQVLTDMNLTISKSYISSD---AGWFMDVFHVKDEHGNKLTDQKVINYIQQAIGTTGEI 110 (484)
Q Consensus 35 ~~~t~I~V-~~~DrpGLfa~ia~vL~~~glnI~~A~Itt~---~g~~~d~F~V~d~~g~~~~~~~~~~~L~~~L~~~~~~ 110 (484)
.+.+.|+| ..+|+||.++++...|++.|+||.--..++. +|..--.|.|.. +..+...+.|.....
T Consensus 13 ~~~~~Itv~~~~~~~G~~a~if~~La~~~InId~i~~s~~~~~~~~~~isf~v~~---------~d~~~a~~~l~~~~~- 82 (178)
T 2dtj_A 13 KSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGTTDITFTCPR---------SDGRRAMEILKKLQV- 82 (178)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEEECCCCTTTCEEEEEEEEEH---------HHHHHHHHHHHTTTT-
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHcCCCEEEEEcCCCCCCCCceEEEEEEcc---------ccHHHHHHHHHHHHH-
Confidence 35678888 4799999999999999999999985544332 332222366642 122333444443211
Q ss_pred CCccccccccceeeecCCCCCCeEEEEEEec---CCCchHHHHHHHHHhCCCeEEEEEEEecCCeeEEEEEEEeCCCCCC
Q 048063 111 PSSAVAKTYTNKAVFGSEYPSEHTAIEMTGT---DRPGLFSEISAALADLHCNIVEAHAWSHNDRLACVAYVSDQSTDTP 187 (484)
Q Consensus 111 ~~~~~~~~~~~v~v~~~~~~~~~t~i~V~~~---DrpGLL~~Ia~vL~~~glnI~~A~i~T~~~~~~dvF~V~~~~~g~~ 187 (484)
... ...+. + ..+...|.|.+. ++||+++++..+|++.|+||.... |.. .--.|.|..
T Consensus 83 -~~~----~~~v~-~----~~~~a~VsvVG~gm~~~~Gv~arif~aLa~~~InI~~is--tSe--~~Is~vV~~------ 142 (178)
T 2dtj_A 83 -QGN----WTNVL-Y----DDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELIS--TSE--IRISVLIRE------ 142 (178)
T ss_dssp -TTT----CSEEE-E----ESCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE--EET--TEEEEEEEG------
T ss_pred -hcC----CCeEE-E----eCCeEEEEEEcCCcccCccHHHHHHHHHHHCCCCEEEEE--cCC--CeEEEEEeH------
Confidence 110 12233 2 235788888886 899999999999999999998843 432 122344422
Q ss_pred CCChhHHHHHHHHHHHHhcc
Q 048063 188 IDDPGRLATIEEYITTVLRA 207 (484)
Q Consensus 188 i~d~~~~~~l~~~L~~~L~g 207 (484)
+..++..+.|.+.+.-
T Consensus 143 ----~d~~~Av~~Lh~~F~l 158 (178)
T 2dtj_A 143 ----DDLDAAARALHEQFQL 158 (178)
T ss_dssp ----GGHHHHHHHHHHHHTC
T ss_pred ----HHHHHHHHHHHHHHcc
Confidence 2345555667776643
No 22
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=96.94 E-value=0.0027 Score=62.62 Aligned_cols=65 Identities=22% Similarity=0.291 Sum_probs=45.7
Q ss_pred CeEEEEEEecCCCchHHHHHHHHHhCCCeEEEEEEEe--cCCeeEEEEEEEeCCCCCCCCChhHHHHHHHHHHHH
Q 048063 132 EHTAIEMTGTDRPGLFSEISAALADLHCNIVEAHAWS--HNDRLACVAYVSDQSTDTPIDDPGRLATIEEYITTV 204 (484)
Q Consensus 132 ~~t~i~V~~~DrpGLL~~Ia~vL~~~glnI~~A~i~T--~~~~~~dvF~V~~~~~g~~i~d~~~~~~l~~~L~~~ 204 (484)
..++|+|.|+|||||.++|+++|+++|+||.+..-++ ..+.+.-...+..+ + . .++.|+++|...
T Consensus 6 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~--~--~----~~~~L~~~f~~l 72 (287)
T 3nrb_A 6 NQYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDEDSSKFFMRVSVEIP--V--A----GVNDFNSAFGKV 72 (287)
T ss_dssp TEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECC--C---------CHHHHHHHHH
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecCCCCeEEEEEEEEcC--C--C----CHHHHHHHHHHH
Confidence 4679999999999999999999999999999999875 33443332222211 1 1 234777777653
No 23
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=96.93 E-value=0.016 Score=57.53 Aligned_cols=40 Identities=15% Similarity=0.143 Sum_probs=35.6
Q ss_pred eeEEEEEeCCCCchHHHHHHHHhhCCceEEEEEEEec--CCe
Q 048063 292 YSIVSVDCKDRPRLMFDTVCTLTDMQYVVFHASIGCH--GDY 331 (484)
Q Consensus 292 ~t~V~V~~~DrpgLl~~i~~~L~~~~l~I~~A~i~t~--~g~ 331 (484)
..+++|.|+||||+++.++..|+++||||.+++.++. .|+
T Consensus 22 ~~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~~~g~ 63 (302)
T 3o1l_A 22 TFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDNLSGW 63 (302)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTTE
T ss_pred eEEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecCCCCe
Confidence 3579999999999999999999999999999999654 454
No 24
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=96.88 E-value=0.022 Score=56.04 Aligned_cols=103 Identities=14% Similarity=0.126 Sum_probs=63.9
Q ss_pred eeEEEEEeCCCCchHHHHHHHHhhCCceEEEEEEEe--cCCeEEEEEEEEccCCCCCCChhHHHHHHHHHH---HHHh--
Q 048063 292 YSIVSVDCKDRPRLMFDTVCTLTDMQYVVFHASIGC--HGDYAFQEYFIRHIDGYALNTEGEKERVIKCLE---AAIE-- 364 (484)
Q Consensus 292 ~t~V~V~~~DrpgLl~~i~~~L~~~~l~I~~A~i~t--~~g~a~d~f~V~~~~g~~~~~~~~~e~l~~~L~---~~l~-- 364 (484)
..+++|.|+||||+++.++..|+++||||.+.+..+ ..|+..-...+.-+++ .+ .+++|++.|+ +.+.
T Consensus 6 ~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~-~~----~~~~L~~~f~~la~~~~m~ 80 (288)
T 3obi_A 6 QYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNAAAK-VI----PLASLRTGFGVIAAKFTMG 80 (288)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEESSC-CC----CHHHHHHHHHHHHHHTTCE
T ss_pred eEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCceEEEEEEEcCCC-CC----CHHHHHHHHHHHHHHcCCE
Confidence 368999999999999999999999999999999953 3454321111211221 11 2455555544 3331
Q ss_pred ---hccCCceEEEEEecCCcchHHHHHHHHHhCCceEE
Q 048063 365 ---RRVCEGVRLELCAANRVGLLSDITRVLRENGLAVV 399 (484)
Q Consensus 365 ---rr~~~~t~leV~a~DRpGLL~~It~~f~~~gi~I~ 399 (484)
+...+...|=|-+-.+---|.+|-....+-.++.+
T Consensus 81 ~~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~ 118 (288)
T 3obi_A 81 WHMRDRETRRKVMLLVSQSDHCLADILYRWRVGDLHMI 118 (288)
T ss_dssp EEEEETTSCEEEEEEECSCCHHHHHHHHHHHTTSSCEE
T ss_pred EEeeccCCCcEEEEEEcCCCCCHHHHHHHHHCCCCCeE
Confidence 11222444555555555677788888777666543
No 25
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=96.85 E-value=0.0052 Score=55.42 Aligned_cols=133 Identities=8% Similarity=0.041 Sum_probs=84.2
Q ss_pred CceeEEEEEe-CCCCchHHHHHHHHhhCCceEEEEEEEec---CCeEEEEEEEEccCCCCCCChhHHHHHHHHHHHHHhh
Q 048063 290 KGYSIVSVDC-KDRPRLMFDTVCTLTDMQYVVFHASIGCH---GDYAFQEYFIRHIDGYALNTEGEKERVIKCLEAAIER 365 (484)
Q Consensus 290 ~~~t~V~V~~-~DrpgLl~~i~~~L~~~~l~I~~A~i~t~---~g~a~d~f~V~~~~g~~~~~~~~~e~l~~~L~~~l~r 365 (484)
++.+.|.|.+ +|+||.++++..+|++.|+||.--..... .|..--+|.|...+. .+..++.+.+...+.-
T Consensus 14 ~~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~I~q~~~~~~~g~~~isf~V~~~d~------~~a~~~L~~~~~~~~~ 87 (167)
T 2dt9_A 14 LDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMIIQGVPGHDPSRQQMAFTVKKDFA------QEALEALEPVLAEIGG 87 (167)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSCEEBCCCCSCTTEEEEEEEEEGGGH------HHHHHHHHHHHHHHCC
T ss_pred CCEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEEEEcCCCCCCCCceEEEEEEehHHH------HHHHHHHHHHHHHhCC
Confidence 3556777766 89999999999999999999987544222 234444566654222 1222222233333321
Q ss_pred c---cCCceEEEEEecC---CcchHHHHHHHHHhCCceEEEEEeeecCCeeeeEEEEEcCCCCCCChHHHHHHHHHh
Q 048063 366 R---VCEGVRLELCAAN---RVGLLSDITRVLRENGLAVVRAHVATKGEKSVNAFYLRDISGNEVDMDFVESMKKEI 436 (484)
Q Consensus 366 r---~~~~t~leV~a~D---RpGLL~~It~~f~~~gi~I~~A~i~T~g~~a~d~F~v~~~~g~~l~~~~~~~l~~~L 436 (484)
. .+....+.|.+.+ +||+++.+.++|.+.||||.... |. +. .-.|.|...+. ++.++.|.+++
T Consensus 88 ~v~~~~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~is--~S-e~-~is~vv~~~d~----~~Av~~Lh~~f 156 (167)
T 2dt9_A 88 EAILRPDIAKVSIVGVGLASTPEVPAKMFQAVASTGANIEMIA--TS-EV-RISVIIPAEYA----EAALRAVHQAF 156 (167)
T ss_dssp EEEEECSEEEEEEEESSGGGSTHHHHHHHHHHHHTTCCCCEEE--EC-SS-EEEEEEEGGGH----HHHHHHHHHHT
T ss_pred cEEEeCCEEEEEEECCCcccCcCHHHHHHHHHHHCCCCEEEEE--cc-CC-EEEEEEeHHHH----HHHHHHHHHHH
Confidence 1 1225778899986 99999999999999999996654 22 22 44566643211 23556676666
No 26
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=96.84 E-value=0.018 Score=56.76 Aligned_cols=36 Identities=11% Similarity=0.080 Sum_probs=33.8
Q ss_pred eeEEEEEeCCCCchHHHHHHHHhhCCceEEEEEEEe
Q 048063 292 YSIVSVDCKDRPRLMFDTVCTLTDMQYVVFHASIGC 327 (484)
Q Consensus 292 ~t~V~V~~~DrpgLl~~i~~~L~~~~l~I~~A~i~t 327 (484)
..+++|.|+||||+++++++.|+++|+||.+++.++
T Consensus 10 ~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~ 45 (292)
T 3lou_A 10 QFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFD 45 (292)
T ss_dssp EEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred cEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEe
Confidence 468999999999999999999999999999999974
No 27
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=96.83 E-value=0.0042 Score=56.18 Aligned_cols=65 Identities=12% Similarity=0.122 Sum_probs=50.2
Q ss_pred eEEEEEEecCCCchHHHHHHHHHhCCCeEEEEEEEecC--CeeEEEEEEEeCCCCCCCCChhHHHHHHHHHHHHh
Q 048063 133 HTAIEMTGTDRPGLFSEISAALADLHCNIVEAHAWSHN--DRLACVAYVSDQSTDTPIDDPGRLATIEEYITTVL 205 (484)
Q Consensus 133 ~t~i~V~~~DrpGLL~~Ia~vL~~~glnI~~A~i~T~~--~~~~dvF~V~~~~~g~~i~d~~~~~~l~~~L~~~L 205 (484)
...|.|...|+||+|++|+++|++.|+||.+..+.+.. +...-+|.+. . +...++.|.+.|.+..
T Consensus 3 ~~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~-~-------d~~~leqI~kqL~Kl~ 69 (164)
T 2f1f_A 3 RRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTV-G-------DEKVLEQIEKQLHKLV 69 (164)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEE-S-------CHHHHHHHHHHHHHST
T ss_pred EEEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEe-c-------cHHHHHHHHHHHcCCC
Confidence 36789999999999999999999999999999987533 3344555554 3 2567788888877643
No 28
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=96.82 E-value=0.018 Score=56.76 Aligned_cols=36 Identities=14% Similarity=-0.035 Sum_probs=33.8
Q ss_pred eeEEEEEeCCCCchHHHHHHHHhhCCceEEEEEEEe
Q 048063 292 YSIVSVDCKDRPRLMFDTVCTLTDMQYVVFHASIGC 327 (484)
Q Consensus 292 ~t~V~V~~~DrpgLl~~i~~~L~~~~l~I~~A~i~t 327 (484)
..+++|.|+||||+++++++.|+++|+||.+.+.++
T Consensus 8 ~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~ 43 (286)
T 3n0v_A 8 TWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFD 43 (286)
T ss_dssp CEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred cEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeec
Confidence 468999999999999999999999999999999974
No 29
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=96.78 E-value=0.011 Score=54.03 Aligned_cols=130 Identities=12% Similarity=0.097 Sum_probs=84.0
Q ss_pred CceeEEEE-EeCCCCchHHHHHHHHhhCCceEEEEEEEec---CCeEEEEEEEEccCCCCCCChhHHHHHHHHHHHH---
Q 048063 290 KGYSIVSV-DCKDRPRLMFDTVCTLTDMQYVVFHASIGCH---GDYAFQEYFIRHIDGYALNTEGEKERVIKCLEAA--- 362 (484)
Q Consensus 290 ~~~t~V~V-~~~DrpgLl~~i~~~L~~~~l~I~~A~i~t~---~g~a~d~f~V~~~~g~~~~~~~~~e~l~~~L~~~--- 362 (484)
++.+.|.| ..+|+||.++++...|++.|+||..-..++. ++...-+|.+... ..++..+.|++.
T Consensus 13 ~~~~~Itv~~~~~~~G~~a~if~~La~~~InId~i~~s~~~~~~~~~~isf~v~~~---------d~~~a~~~l~~~~~~ 83 (178)
T 2dtj_A 13 KSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGTTDITFTCPRS---------DGRRAMEILKKLQVQ 83 (178)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEEECCCCTTTCEEEEEEEEEHH---------HHHHHHHHHHTTTTT
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHcCCCEEEEEcCCCCCCCCceEEEEEEccc---------cHHHHHHHHHHHHHh
Confidence 35567777 4699999999999999999999987655433 3333234666431 223333334331
Q ss_pred Hhh----ccCCceEEEEEec---CCcchHHHHHHHHHhCCceEEEEEeeecCCeeeeEEEEEcCCCCCCChHHHHHHHHH
Q 048063 363 IER----RVCEGVRLELCAA---NRVGLLSDITRVLRENGLAVVRAHVATKGEKSVNAFYLRDISGNEVDMDFVESMKKE 435 (484)
Q Consensus 363 l~r----r~~~~t~leV~a~---DRpGLL~~It~~f~~~gi~I~~A~i~T~g~~a~d~F~v~~~~g~~l~~~~~~~l~~~ 435 (484)
+.- -.+....|.|.+. ++||+++.+.++|.+.||||.... |.. ..-.|.|...+. +..++.|.++
T Consensus 84 ~~~~~v~~~~~~a~VsvVG~gm~~~~Gv~arif~aLa~~~InI~~is--tSe--~~Is~vV~~~d~----~~Av~~Lh~~ 155 (178)
T 2dtj_A 84 GNWTNVLYDDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELIS--TSE--IRISVLIREDDL----DAAARALHEQ 155 (178)
T ss_dssp TTCSEEEEESCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE--EET--TEEEEEEEGGGH----HHHHHHHHHH
T ss_pred cCCCeEEEeCCeEEEEEEcCCcccCccHHHHHHHHHHHCCCCEEEEE--cCC--CeEEEEEeHHHH----HHHHHHHHHH
Confidence 110 0122577888887 899999999999999999999853 321 334566633211 2355677777
Q ss_pred h
Q 048063 436 I 436 (484)
Q Consensus 436 L 436 (484)
+
T Consensus 156 F 156 (178)
T 2dtj_A 156 F 156 (178)
T ss_dssp H
T ss_pred H
Confidence 7
No 30
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=96.64 E-value=0.0068 Score=54.84 Aligned_cols=65 Identities=9% Similarity=0.120 Sum_probs=50.0
Q ss_pred eEEEEEEecCCCchHHHHHHHHHhCCCeEEEEEEEe-cC-CeeEEEEEEEeCCCCCCCCChhHHHHHHHHHHHHh
Q 048063 133 HTAIEMTGTDRPGLFSEISAALADLHCNIVEAHAWS-HN-DRLACVAYVSDQSTDTPIDDPGRLATIEEYITTVL 205 (484)
Q Consensus 133 ~t~i~V~~~DrpGLL~~Ia~vL~~~glnI~~A~i~T-~~-~~~~dvF~V~~~~~g~~i~d~~~~~~l~~~L~~~L 205 (484)
...|.|...|+||+|++|+++|++.|+||.+..+.+ .+ +...-+|.|... ...++.|.++|.+..
T Consensus 4 ~~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~~d--------~~~leql~kQL~Kl~ 70 (165)
T 2pc6_A 4 RHIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTNGP--------DEIVEQITKQLNKLI 70 (165)
T ss_dssp EEEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEEEC--------HHHHHHHHHHHHHST
T ss_pred EEEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEecc--------HHHHHHHHHHhcCCC
Confidence 367899999999999999999999999999999875 43 334455555422 467788888877643
No 31
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=96.60 E-value=0.0093 Score=53.73 Aligned_cols=109 Identities=14% Similarity=0.233 Sum_probs=72.8
Q ss_pred CCeEEEEEEe-cCCCcHHHHHHHHHHhCCceEEEEEEEe---cCCeEEEEEEEeeCCCCCCCcHHHHHHHHHHHccCCCC
Q 048063 35 EDCTVVKVDS-VSKQGLLLEMVQVLTDMNLTISKSYISS---DAGWFMDVFHVKDEHGNKLTDQKVINYIQQAIGTTGEI 110 (484)
Q Consensus 35 ~~~t~I~V~~-~DrpGLfa~ia~vL~~~glnI~~A~Itt---~~g~~~d~F~V~d~~g~~~~~~~~~~~L~~~L~~~~~~ 110 (484)
.+.+.|+|.+ +|+||..+++..+|++.|+||.--..+. +.|..--.|.|...+. ++..+.|++...+.
T Consensus 14 ~~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~I~q~~~~~~~g~~~isf~V~~~d~-----~~a~~~L~~~~~~~--- 85 (167)
T 2dt9_A 14 LDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMIIQGVPGHDPSRQQMAFTVKKDFA-----QEALEALEPVLAEI--- 85 (167)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSCEEBCCCCSCTTEEEEEEEEEGGGH-----HHHHHHHHHHHHHH---
T ss_pred CCEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEEEEcCCCCCCCCceEEEEEEehHHH-----HHHHHHHHHHHHHh---
Confidence 3567788775 8999999999999999999998543321 1344445577753211 12223333321111
Q ss_pred CCccccccccceeeecCCCCCCeEEEEEEecC---CCchHHHHHHHHHhCCCeEEEE
Q 048063 111 PSSAVAKTYTNKAVFGSEYPSEHTAIEMTGTD---RPGLFSEISAALADLHCNIVEA 164 (484)
Q Consensus 111 ~~~~~~~~~~~v~v~~~~~~~~~t~i~V~~~D---rpGLL~~Ia~vL~~~glnI~~A 164 (484)
.+ .+. + ..+...+.|.+.+ +||.++++..+|++.|+||...
T Consensus 86 -~~-------~v~-~----~~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~i 129 (167)
T 2dt9_A 86 -GG-------EAI-L----RPDIAKVSIVGVGLASTPEVPAKMFQAVASTGANIEMI 129 (167)
T ss_dssp -CC-------EEE-E----ECSEEEEEEEESSGGGSTHHHHHHHHHHHHTTCCCCEE
T ss_pred -CC-------cEE-E----eCCEEEEEEECCCcccCcCHHHHHHHHHHHCCCCEEEE
Confidence 01 233 2 2367889999876 9999999999999999999544
No 32
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=96.51 E-value=0.0056 Score=55.37 Aligned_cols=70 Identities=20% Similarity=0.207 Sum_probs=48.7
Q ss_pred eEEEEEecCCcchHHHHHHHHHhCCceEEEEEeeecC--CeeeeEEEEEcCCCCCCChHHHHHHHHHhCC--CceEEeec
Q 048063 371 VRLELCAANRVGLLSDITRVLRENGLAVVRAHVATKG--EKSVNAFYLRDISGNEVDMDFVESMKKEILG--PIDLAVKN 446 (484)
Q Consensus 371 t~leV~a~DRpGLL~~It~~f~~~gi~I~~A~i~T~g--~~a~d~F~v~~~~g~~l~~~~~~~l~~~L~~--~~~~~~~~ 446 (484)
+.|+|.+.||||+|++|+.+|+++|+||.++.+.+.. +.+.-+|.+. |. ++..+++..+| - ..|..++.
T Consensus 4 ~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~---~d---~~~leqI~kqL-~Kl~dV~~V~r 76 (164)
T 2f1f_A 4 RILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTV---GD---EKVLEQIEKQL-HKLVDVLRVSE 76 (164)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEE---SC---HHHHHHHHHHH-HHSTTEEEEEE
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEe---cc---HHHHHHHHHHH-cCCCCEEEEEE
Confidence 5799999999999999999999999999999987543 2344455553 22 33444444444 1 14666644
Q ss_pred C
Q 048063 447 D 447 (484)
Q Consensus 447 ~ 447 (484)
-
T Consensus 77 ~ 77 (164)
T 2f1f_A 77 L 77 (164)
T ss_dssp G
T ss_pred c
Confidence 3
No 33
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=96.21 E-value=0.066 Score=48.93 Aligned_cols=137 Identities=13% Similarity=0.178 Sum_probs=84.3
Q ss_pred CeEEEEE-EecCCCcHHHHHHHHHHhCCceEEEEEEE-ec--CCeEEEEEEEeeCCCCCCCcHHHHHHHHHHHccCCCCC
Q 048063 36 DCTVVKV-DSVSKQGLLLEMVQVLTDMNLTISKSYIS-SD--AGWFMDVFHVKDEHGNKLTDQKVINYIQQAIGTTGEIP 111 (484)
Q Consensus 36 ~~t~I~V-~~~DrpGLfa~ia~vL~~~glnI~~A~It-t~--~g~~~d~F~V~d~~g~~~~~~~~~~~L~~~L~~~~~~~ 111 (484)
+.+.|+| ..+|+||.++++..+|++.|+||.--..+ +. +|..--.|.|...+. +...+.|++ +....
T Consensus 15 ~~~~Iti~~~~~~~G~~a~If~~La~~~I~vd~I~q~~s~~~~g~~~isftv~~~~~-----~~a~~~L~~-~~~el--- 85 (181)
T 3s1t_A 15 SEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRDVG-----PAAVEKLDS-LRNEI--- 85 (181)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCCEEECCCCTTTCEEEEEEEEETTTH-----HHHHHHHHH-THHHH---
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCcEEEEEecCCcccCCccEEEEEEehhHH-----HHHHHHHHH-HHHhc---
Confidence 4556665 47899999999999999999999743332 22 565555677753211 112122222 11100
Q ss_pred CccccccccceeeecCCCCCCeEEEEEEec---CCCchHHHHHHHHHhCCCeEEEEEEEecCCeeEEEEEEEeCCCCCCC
Q 048063 112 SSAVAKTYTNKAVFGSEYPSEHTAIEMTGT---DRPGLFSEISAALADLHCNIVEAHAWSHNDRLACVAYVSDQSTDTPI 188 (484)
Q Consensus 112 ~~~~~~~~~~v~v~~~~~~~~~t~i~V~~~---DrpGLL~~Ia~vL~~~glnI~~A~i~T~~~~~~dvF~V~~~~~g~~i 188 (484)
.+ ..+. ++ .+...|.|.+. ++||+.+++..+|++.|+||.... |..- --.|.|...
T Consensus 86 ~~------~~v~-~~----~~va~VsvVG~gm~~~~Gvaa~~f~aLa~~~InI~~Is--tSei--~Is~vV~~~------ 144 (181)
T 3s1t_A 86 GF------SQLL-YD----DHIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS--TSEI--RISVLCRDT------ 144 (181)
T ss_dssp CC------SEEE-EE----SCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE--EETT--EEEEEEEGG------
T ss_pred Cc------ceEE-Ee----CCEEEEEEEecccccCchHHHHHHHHHHHCCCcEEEEE--cCCC--EEEEEEeHH------
Confidence 01 1233 32 35778888875 899999999999999999998876 3321 223434332
Q ss_pred CChhHHHHHHHHHHHHhc
Q 048063 189 DDPGRLATIEEYITTVLR 206 (484)
Q Consensus 189 ~d~~~~~~l~~~L~~~L~ 206 (484)
..++..++|.+++.
T Consensus 145 ----d~~~Av~aLH~~f~ 158 (181)
T 3s1t_A 145 ----ELDKAVVALHEAFG 158 (181)
T ss_dssp ----GHHHHHHHHHHHHT
T ss_pred ----HHHHHHHHHHHHHc
Confidence 33555567777764
No 34
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=96.15 E-value=0.013 Score=52.87 Aligned_cols=70 Identities=19% Similarity=0.218 Sum_probs=48.6
Q ss_pred eEEEEEecCCcchHHHHHHHHHhCCceEEEEEeeecC--CeeeeEEEEEcCCCCCCChHHHHHHHHHhCC--CceEEeec
Q 048063 371 VRLELCAANRVGLLSDITRVLRENGLAVVRAHVATKG--EKSVNAFYLRDISGNEVDMDFVESMKKEILG--PIDLAVKN 446 (484)
Q Consensus 371 t~leV~a~DRpGLL~~It~~f~~~gi~I~~A~i~T~g--~~a~d~F~v~~~~g~~l~~~~~~~l~~~L~~--~~~~~~~~ 446 (484)
+.++|.+.|+||+|++|+.+|+++|+||.++.+.+.. +...-+|.+. |. +...+++..+| - ..|..++.
T Consensus 5 ~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~---~d---~~~leql~kQL-~Kl~dV~~V~~ 77 (165)
T 2pc6_A 5 HIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTN---GP---DEIVEQITKQL-NKLIEVVKLID 77 (165)
T ss_dssp EEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEE---EC---HHHHHHHHHHH-HHSTTEEEEEE
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEe---cc---HHHHHHHHHHh-cCCCCEEEEEE
Confidence 5799999999999999999999999999999987443 2344455553 22 33445555444 1 14666654
Q ss_pred C
Q 048063 447 D 447 (484)
Q Consensus 447 ~ 447 (484)
-
T Consensus 78 ~ 78 (165)
T 2pc6_A 78 L 78 (165)
T ss_dssp G
T ss_pred c
Confidence 3
No 35
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=96.09 E-value=0.02 Score=51.11 Aligned_cols=59 Identities=17% Similarity=0.105 Sum_probs=45.1
Q ss_pred EEEEEecCCCchHHHHHHHHHhCCCeEEEEEEEecCCeeEEEEEEEeCCCCCCCCChhHHHHHHHHHHH
Q 048063 135 AIEMTGTDRPGLFSEISAALADLHCNIVEAHAWSHNDRLACVAYVSDQSTDTPIDDPGRLATIEEYITT 203 (484)
Q Consensus 135 ~i~V~~~DrpGLL~~Ia~vL~~~glnI~~A~i~T~~~~~~dvF~V~~~~~g~~i~d~~~~~~l~~~L~~ 203 (484)
.|+|.+.||+|||++|+.+|+.+++||..+.+.+.+ . +++.-+ ..+...+..|...+..
T Consensus 2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~~g-~----i~~~~~-----~~~~~~~~~L~~~l~~ 60 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPIG-R----IYLNFA-----ELEFESFSSLMAEIRR 60 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEETTT-E----EEEEEC-----CCCHHHHHHHHHHHHH
T ss_pred EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEecCC-E----EEEEEE-----eCCHHHHHHHHHHHHc
Confidence 588999999999999999999999999999997663 1 444433 1234566777766655
No 36
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=96.06 E-value=0.019 Score=51.27 Aligned_cols=36 Identities=25% Similarity=0.480 Sum_probs=33.4
Q ss_pred EEEEEecCCcchHHHHHHHHHhCCceEEEEEeeecC
Q 048063 372 RLELCAANRVGLLSDITRVLRENGLAVVRAHVATKG 407 (484)
Q Consensus 372 ~leV~a~DRpGLL~~It~~f~~~gi~I~~A~i~T~g 407 (484)
.|+|.|.||+|||++|+++|.++++||..+.+.+.|
T Consensus 2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~~g 37 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPIG 37 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEETTT
T ss_pred EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEecCC
Confidence 489999999999999999999999999999997663
No 37
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=96.02 E-value=0.02 Score=52.94 Aligned_cols=65 Identities=18% Similarity=0.260 Sum_probs=48.9
Q ss_pred eEEEEEEecCCCchHHHHHHHHHhCCCeEEEEEEE-ecCCeeE-EEEEEEeCCCCCCCCChhHHHHHHHHHHHHh
Q 048063 133 HTAIEMTGTDRPGLFSEISAALADLHCNIVEAHAW-SHNDRLA-CVAYVSDQSTDTPIDDPGRLATIEEYITTVL 205 (484)
Q Consensus 133 ~t~i~V~~~DrpGLL~~Ia~vL~~~glnI~~A~i~-T~~~~~~-dvF~V~~~~~g~~i~d~~~~~~l~~~L~~~L 205 (484)
...|.|...|+||.|++|+++|+..|+||.+..+. |.+.... -++.|... +..++.|.++|.+..
T Consensus 29 ~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~--------e~~ieqL~kQL~KLi 95 (193)
T 2fgc_A 29 EHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGD--------DKTIEQIEKQAYKLV 95 (193)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEEC--------TTHHHHHHHHHTTST
T ss_pred EEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECC--------HHHHHHHHHHhcCcC
Confidence 47899999999999999999999999999998887 4553444 44555432 245677777776644
No 38
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=95.76 E-value=0.63 Score=50.34 Aligned_cols=139 Identities=15% Similarity=0.201 Sum_probs=84.7
Q ss_pred ceeEEEEEeC---CCCchHHHHHHHHhhCCceEEEEEEEecCCeEEEEEEEEccCCCCCCChhHHHHHHHHHHHHHhhc-
Q 048063 291 GYSIVSVDCK---DRPRLMFDTVCTLTDMQYVVFHASIGCHGDYAFQEYFIRHIDGYALNTEGEKERVIKCLEAAIERR- 366 (484)
Q Consensus 291 ~~t~V~V~~~---DrpgLl~~i~~~L~~~~l~I~~A~i~t~~g~a~d~f~V~~~~g~~~~~~~~~e~l~~~L~~~l~rr- 366 (484)
+...|.|.|. .+||+.+++..+|.+.++||.--. +. ... -+|.|.. ...+...+.|-+.+...
T Consensus 354 ~~a~VsvVG~gm~~~~Gv~a~if~aL~~~~Ini~~is--tS-e~~-Is~vI~~---------~d~~~Av~aLh~~f~~~~ 420 (600)
T 3l76_A 354 GIAKIAIAGAGMIGRPGIAAKMFKTLADVGVNIEMIS--TS-EVK-VSCVIDQ---------RDADRAIAALSNAFGVTL 420 (600)
T ss_dssp SEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCCCEEE--EC-SSE-EEEEEEG---------GGHHHHHHHHHHHTTCCB
T ss_pred CeEEEEEECCCcccCccHHHHHHHHHHhCCCcEEEEe--cC-CCE-EEEEEcH---------HHHHHHHHHHHHhhcccC
Confidence 5567888874 799999999999999999996543 22 221 1244433 24455556666665211
Q ss_pred cC--------------------CceEEEEE-ecCCcchHHHHHHHHHhCCceEEEEEeeecC----C--eeeeEEEEEcC
Q 048063 367 VC--------------------EGVRLELC-AANRVGLLSDITRVLRENGLAVVRAHVATKG----E--KSVNAFYLRDI 419 (484)
Q Consensus 367 ~~--------------------~~t~leV~-a~DRpGLL~~It~~f~~~gi~I~~A~i~T~g----~--~a~d~F~v~~~ 419 (484)
.| .-..|.|. ..|+||+.++|-..|+++||++....-+... + ...=.|.+...
T Consensus 421 t~~~~~~~~~~~~~v~Gia~~~~~a~i~i~~~~~~~g~~~~if~~La~~~I~vDmI~q~~~~~~~~g~~~~~isftv~~~ 500 (600)
T 3l76_A 421 SPPKNQTDTSHLPAVRGVALDQDQAQIAIRHVPDRPGMAAQLFTALAEANISVDMIIQSQRCRINQGTPCRDIAFMVAEG 500 (600)
T ss_dssp CCCCCCCC---CCSCCEEEEECSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCEEEEEEECCCSSSSCEEEEEEEEEHH
T ss_pred CCccccccccccCceEEEEeeCCEEEEEEecCCCCccHHHHHHHHHHHcCCcEEEEEecccccccCCCccceEEEEEeHH
Confidence 11 02456554 4799999999999999999999766554321 1 23446777543
Q ss_pred CCCCCChHHHHHHHHHhCCCceEEe
Q 048063 420 SGNEVDMDFVESMKKEILGPIDLAV 444 (484)
Q Consensus 420 ~g~~l~~~~~~~l~~~L~~~~~~~~ 444 (484)
+... ..+.++.++.++ |...+.+
T Consensus 501 d~~~-a~~~l~~~~~~~-~~~~v~~ 523 (600)
T 3l76_A 501 DSSQ-AEAILQPLIKDW-LDAAIVV 523 (600)
T ss_dssp HHHH-HHHHHHHHTTTS-TTCEEEE
T ss_pred HHHH-HHHHHHHHHHhc-CCceEEE
Confidence 2221 112344555556 5333333
No 39
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=95.73 E-value=0.072 Score=48.69 Aligned_cols=132 Identities=12% Similarity=0.049 Sum_probs=84.1
Q ss_pred ceeEEEE-EeCCCCchHHHHHHHHhhCCceEEEEEEE-ec--CCeEEEEEEEEccCCCCCCChhHHHHHHHHHHHHHh--
Q 048063 291 GYSIVSV-DCKDRPRLMFDTVCTLTDMQYVVFHASIG-CH--GDYAFQEYFIRHIDGYALNTEGEKERVIKCLEAAIE-- 364 (484)
Q Consensus 291 ~~t~V~V-~~~DrpgLl~~i~~~L~~~~l~I~~A~i~-t~--~g~a~d~f~V~~~~g~~~~~~~~~e~l~~~L~~~l~-- 364 (484)
+.+.|.| ..+|+||.++++...|++.|+||.--... .. .|..--+|+|...+.. +..++.+.+...+.
T Consensus 15 ~~~~Iti~~~~~~~G~~a~If~~La~~~I~vd~I~q~~s~~~~g~~~isftv~~~~~~------~a~~~L~~~~~el~~~ 88 (181)
T 3s1t_A 15 SEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRDVGP------AAVEKLDSLRNEIGFS 88 (181)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCCEEECCCCTTTCEEEEEEEEETTTHH------HHHHHHHHTHHHHCCS
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCcEEEEEecCCcccCCccEEEEEEehhHHH------HHHHHHHHHHHhcCcc
Confidence 3444544 36899999999999999999999754442 22 4555556777542221 22232233333331
Q ss_pred --hccCCceEEEEEec---CCcchHHHHHHHHHhCCceEEEEEeeecCCeeeeEEEEEcCCCCCCChHHHHHHHHHh
Q 048063 365 --RRVCEGVRLELCAA---NRVGLLSDITRVLRENGLAVVRAHVATKGEKSVNAFYLRDISGNEVDMDFVESMKKEI 436 (484)
Q Consensus 365 --rr~~~~t~leV~a~---DRpGLL~~It~~f~~~gi~I~~A~i~T~g~~a~d~F~v~~~~g~~l~~~~~~~l~~~L 436 (484)
.-.+....|.|.+. ++||+++.+.++|.+.||||.... |. ...=.|.|...+. +..++.|.+++
T Consensus 89 ~v~~~~~va~VsvVG~gm~~~~Gvaa~~f~aLa~~~InI~~Is--tS--ei~Is~vV~~~d~----~~Av~aLH~~f 157 (181)
T 3s1t_A 89 QLLYDDHIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS--TS--EIRISVLCRDTEL----DKAVVALHEAF 157 (181)
T ss_dssp EEEEESCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE--EE--TTEEEEEEEGGGH----HHHHHHHHHHH
T ss_pred eEEEeCCEEEEEEEecccccCchHHHHHHHHHHHCCCcEEEEE--cC--CCEEEEEEeHHHH----HHHHHHHHHHH
Confidence 01123578888886 899999999999999999999877 22 2333466644311 23567777777
No 40
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=95.60 E-value=0.22 Score=45.94 Aligned_cols=110 Identities=17% Similarity=0.180 Sum_probs=73.2
Q ss_pred eEEEEEEecCCCcHHHHHHHHHHhCCceEEEEEE-Eec-CCeEEEEEEEeeCCCCCCCcHHHHHHHHHHHccCCCCCCcc
Q 048063 37 CTVVKVDSVSKQGLLLEMVQVLTDMNLTISKSYI-SSD-AGWFMDVFHVKDEHGNKLTDQKVINYIQQAIGTTGEIPSSA 114 (484)
Q Consensus 37 ~t~I~V~~~DrpGLfa~ia~vL~~~glnI~~A~I-tt~-~g~~~d~F~V~d~~g~~~~~~~~~~~L~~~L~~~~~~~~~~ 114 (484)
...|+|...|+||.|++++++|+..|+||.+-.+ .|. .|..--++.|... +..++.|.+.|..... ..
T Consensus 29 ~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~-------e~~ieqL~kQL~KLid--Vi- 98 (193)
T 2fgc_A 29 EHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGD-------DKTIEQIEKQAYKLVE--VV- 98 (193)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEEC-------TTHHHHHHHHHTTSTT--EE-
T ss_pred EEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECC-------HHHHHHHHHHhcCcCc--eE-
Confidence 4689999999999999999999999999998776 454 4666555666532 3467788877765321 00
Q ss_pred ccccccceeeecC----CCCCCeEEEEEEecCCCchHHHHHHHHHhCCCeEEEEE
Q 048063 115 VAKTYTNKAVFGS----EYPSEHTAIEMTGTDRPGLFSEISAALADLHCNIVEAH 165 (484)
Q Consensus 115 ~~~~~~~v~v~~~----~~~~~~t~i~V~~~DrpGLL~~Ia~vL~~~glnI~~A~ 165 (484)
+|..+.+ .-...-..|.|.+... -.+|.++...++.+|.+..
T Consensus 99 ------kV~dl~~~~~~~v~REl~LiKV~~~~~---r~ei~~i~~~fra~ivDv~ 144 (193)
T 2fgc_A 99 ------KVTPIDPLPENRVEREMALIKVRFDED---KQEIFQLVEIFRGKIIDVS 144 (193)
T ss_dssp ------EEEECCSSGGGEEEEEEEEEEEECSSC---HHHHHHHHHHTTCEEEEEC
T ss_pred ------EEEEecCCCCccceeEEEEEEEeCCcC---HHHHHHHHHHcCCEEEEEc
Confidence 1110111 0112455677766443 7788888888888887763
No 41
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=95.46 E-value=0.45 Score=49.09 Aligned_cols=137 Identities=17% Similarity=0.243 Sum_probs=86.2
Q ss_pred CeEEEEEE-ecCCCcHHHHHHHHHHhCCceEEEEEEEec---CCeEEEEEEEeeCCCCCCCcHHHHHHHHHHHccCCCCC
Q 048063 36 DCTVVKVD-SVSKQGLLLEMVQVLTDMNLTISKSYISSD---AGWFMDVFHVKDEHGNKLTDQKVINYIQQAIGTTGEIP 111 (484)
Q Consensus 36 ~~t~I~V~-~~DrpGLfa~ia~vL~~~glnI~~A~Itt~---~g~~~d~F~V~d~~g~~~~~~~~~~~L~~~L~~~~~~~ 111 (484)
+.+.|+|. .+|+||.++++...|+++|+||.--..++. +|...-.|.|... . .++..+.|++ +..+.
T Consensus 263 ~~~~i~v~~~~~~~g~~~~If~~La~~~I~vd~I~q~~s~~~~g~~~isf~v~~~--~---~~~a~~~l~~-~~~~~--- 333 (421)
T 3ab4_A 263 SEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVFSVEDGTTDITFTCPRS--D---GRRAMEILKK-LQVQG--- 333 (421)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCEEEEECCCC--CCEEEEEEEEETT--T---HHHHHHHHHH-HHTTT---
T ss_pred CEEEEEEeccCCcccHHHHHHHHHHHcCCcEEEEEccCccccCCcceEEEEEech--h---HHHHHHHHHH-HHHHc---
Confidence 45677777 699999999999999999999986544332 4544555777531 1 1222333333 22221
Q ss_pred CccccccccceeeecCCCCCCeEEEEEEec---CCCchHHHHHHHHHhCCCeEEEEEEEecCCeeEEEEEEEeCCCCCCC
Q 048063 112 SSAVAKTYTNKAVFGSEYPSEHTAIEMTGT---DRPGLFSEISAALADLHCNIVEAHAWSHNDRLACVAYVSDQSTDTPI 188 (484)
Q Consensus 112 ~~~~~~~~~~v~v~~~~~~~~~t~i~V~~~---DrpGLL~~Ia~vL~~~glnI~~A~i~T~~~~~~dvF~V~~~~~g~~i 188 (484)
.+ ..+. + ..+...+.|.+. ++||.++++..+|++.|+||... .|..-. -.|.|..
T Consensus 334 ~~------~~v~-~----~~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~i--s~Se~~--is~vV~~------- 391 (421)
T 3ab4_A 334 NW------TNVL-Y----DDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELI--STSEIR--ISVLIRE------- 391 (421)
T ss_dssp TC------SEEE-E----ECCEEEEEEECGGGTSCTTHHHHHHHHHHHTTCCCCEE--EEETTE--EEEEEEG-------
T ss_pred CC------ceEE-E----eCCeEEEEEEccCcccCccHHHHHHHHHHHCCCCEEEE--EcCCCe--EEEEEeH-------
Confidence 11 1233 3 235788888885 89999999999999999999843 233222 2233332
Q ss_pred CChhHHHHHHHHHHHHhc
Q 048063 189 DDPGRLATIEEYITTVLR 206 (484)
Q Consensus 189 ~d~~~~~~l~~~L~~~L~ 206 (484)
+..++..+.|++.+-
T Consensus 392 ---~d~~~Av~~Lh~~f~ 406 (421)
T 3ab4_A 392 ---DDLDAAARALHEQFQ 406 (421)
T ss_dssp ---GGHHHHHHHHHHHTT
T ss_pred ---HHHHHHHHHHHHHHh
Confidence 234555667777664
No 42
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=95.35 E-value=0.023 Score=53.38 Aligned_cols=69 Identities=22% Similarity=0.263 Sum_probs=44.7
Q ss_pred ceEEEEEecCCcchHHHHHHHHHhCCceEEEEEeeecC--C---eeeeEEEEEcCCCCCCChHHHHHHHHHhCCCceEEe
Q 048063 370 GVRLELCAANRVGLLSDITRVLRENGLAVVRAHVATKG--E---KSVNAFYLRDISGNEVDMDFVESMKKEILGPIDLAV 444 (484)
Q Consensus 370 ~t~leV~a~DRpGLL~~It~~f~~~gi~I~~A~i~T~g--~---~a~d~F~v~~~~g~~l~~~~~~~l~~~L~~~~~~~~ 444 (484)
...|+|.+.||||+|++|+.+|+++++||...+..+.. + .|.-.+-+.+. .-++..++|++ + .-+..+
T Consensus 4 ~VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~kG~~ng~A~I~IEV~d~----~Le~LL~kLrk-I--~gV~~V 76 (223)
T 1y7p_A 4 LRGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIKHGEHEGKALIYFEIEGG----DFEKILERVKT-F--DYIIEI 76 (223)
T ss_dssp CEEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECCSSTTTTEEEEEEEECSS----CHHHHHHHHHT-C--TTEEEE
T ss_pred eEEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccccCCcCCEEEEEEEECCC----CHHHHHHHHhC-C--CCeeEE
Confidence 35799999999999999999999999999999998853 2 34444555332 11345566644 4 335555
Q ss_pred e
Q 048063 445 K 445 (484)
Q Consensus 445 ~ 445 (484)
+
T Consensus 77 ~ 77 (223)
T 1y7p_A 77 E 77 (223)
T ss_dssp E
T ss_pred E
Confidence 4
No 43
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=95.34 E-value=0.029 Score=52.62 Aligned_cols=38 Identities=13% Similarity=0.292 Sum_probs=31.4
Q ss_pred eEEEEEEecCCCchHHHHHHHHHhCCCeEEEEEEEecC
Q 048063 133 HTAIEMTGTDRPGLFSEISAALADLHCNIVEAHAWSHN 170 (484)
Q Consensus 133 ~t~i~V~~~DrpGLL~~Ia~vL~~~glnI~~A~i~T~~ 170 (484)
...|.|.+.||||+|++|+.+|+++++||...+..+..
T Consensus 4 ~VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~ 41 (223)
T 1y7p_A 4 LRGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIK 41 (223)
T ss_dssp CEEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECC
T ss_pred eEEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccc
Confidence 56899999999999999999999999999999999854
No 44
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=95.01 E-value=0.092 Score=48.84 Aligned_cols=133 Identities=12% Similarity=0.048 Sum_probs=84.4
Q ss_pred CceeEEEEE-eCCCCchHHHHHHHHhhCCceEEEEEEEe---cCCeEEEEEEEEccCCCCCCChhHHHHHHHHHHHHHhh
Q 048063 290 KGYSIVSVD-CKDRPRLMFDTVCTLTDMQYVVFHASIGC---HGDYAFQEYFIRHIDGYALNTEGEKERVIKCLEAAIER 365 (484)
Q Consensus 290 ~~~t~V~V~-~~DrpgLl~~i~~~L~~~~l~I~~A~i~t---~~g~a~d~f~V~~~~g~~~~~~~~~e~l~~~L~~~l~r 365 (484)
++.+.|.|. .+|+||+.+++..+|++.|+||----.+. ..+....+|.+...+. .+..++...+...+.-
T Consensus 33 ~~~a~Iti~g~~~~pG~aa~IF~~La~~~InVDmI~Qs~s~~~~~~~~~sftv~~~d~------~~~~~~l~~~~~~~~~ 106 (200)
T 4go7_X 33 RSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRDVG------PAAVEKLDSLRNEIGF 106 (200)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEECCCCC--CCEEEEEEEEEGGGH------HHHHHHHHTTHHHHCC
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHhCcceEEEeeccccccccceEEEEecchhhH------HHHHHHHHHHHhhhce
Confidence 355667665 59999999999999999999997643322 1345555676644222 1233333333333311
Q ss_pred ----ccCCceEEEEEec---CCcchHHHHHHHHHhCCceEEEEEeeecCCeeeeEEEEEcCCCCCCChHHHHHHHHHh
Q 048063 366 ----RVCEGVRLELCAA---NRVGLLSDITRVLRENGLAVVRAHVATKGEKSVNAFYLRDISGNEVDMDFVESMKKEI 436 (484)
Q Consensus 366 ----r~~~~t~leV~a~---DRpGLL~~It~~f~~~gi~I~~A~i~T~g~~a~d~F~v~~~~g~~l~~~~~~~l~~~L 436 (484)
-.+....|.|.+. .+||+.+.+-++|++.||||.... |- ...=.|.|...+. +..+..|.++.
T Consensus 107 ~~v~~~~~iakVSvVG~GM~~~~GVaak~F~aLa~~~INI~mIs--tS--Ei~IS~vV~~~d~----~~Av~aLH~~F 176 (200)
T 4go7_X 107 SQLLYDDHIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS--TS--EIRISVLCRDTEL----DKAVVALHEAF 176 (200)
T ss_dssp SEEEEECCEEEEEEEEESCTTCHHHHHHHHHHHHHTTCCCCEEE--EC--SSEEEEEEEGGGH----HHHHHHHHHHH
T ss_pred eeEEEecCeeeeeeeccccccCCCcHHHHHHHHHHCCCCEEEEE--cc--CCEEEEEEeHHHH----HHHHHHHHHHh
Confidence 1122567778775 699999999999999999999886 21 1233466643321 23566777776
No 45
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=94.92 E-value=0.09 Score=48.91 Aligned_cols=111 Identities=14% Similarity=0.187 Sum_probs=71.3
Q ss_pred CCeEEEEEE-ecCCCcHHHHHHHHHHhCCceEEEEEEEe---cCCeEEEEEEEeeCCCCCCCcHHHHHHHHHHHccCCCC
Q 048063 35 EDCTVVKVD-SVSKQGLLLEMVQVLTDMNLTISKSYISS---DAGWFMDVFHVKDEHGNKLTDQKVINYIQQAIGTTGEI 110 (484)
Q Consensus 35 ~~~t~I~V~-~~DrpGLfa~ia~vL~~~glnI~~A~Itt---~~g~~~d~F~V~d~~g~~~~~~~~~~~L~~~L~~~~~~ 110 (484)
.+.+.|+|. .+|+||..+++.+.|++.|+||----.+. .++.....|.+... ..+...+.|.....
T Consensus 33 ~~~a~Iti~g~~~~pG~aa~IF~~La~~~InVDmI~Qs~s~~~~~~~~~sftv~~~---------d~~~~~~~l~~~~~- 102 (200)
T 4go7_X 33 RSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRD---------VGPAAVEKLDSLRN- 102 (200)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEECCCCC--CCEEEEEEEEEGG---------GHHHHHHHHHTTHH-
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHhCcceEEEeeccccccccceEEEEecchh---------hHHHHHHHHHHHHh-
Confidence 356778876 69999999999999999999997543221 34555556777532 11222222222100
Q ss_pred CCccccccccceeeecCCCCCCeEEEEEEe---cCCCchHHHHHHHHHhCCCeEEEEE
Q 048063 111 PSSAVAKTYTNKAVFGSEYPSEHTAIEMTG---TDRPGLFSEISAALADLHCNIVEAH 165 (484)
Q Consensus 111 ~~~~~~~~~~~v~v~~~~~~~~~t~i~V~~---~DrpGLL~~Ia~vL~~~glnI~~A~ 165 (484)
.. ....+. ++ .+...|.|.+ +.+||+.+++..+|++.|+||..-.
T Consensus 103 -~~----~~~~v~-~~----~~iakVSvVG~GM~~~~GVaak~F~aLa~~~INI~mIs 150 (200)
T 4go7_X 103 -EI----GFSQLL-YD----DHIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS 150 (200)
T ss_dssp -HH----CCSEEE-EE----CCEEEEEEEEESCTTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred -hh----ceeeEE-Ee----cCeeeeeeeccccccCCCcHHHHHHHHHHCCCCEEEEE
Confidence 00 011233 22 2456666665 6899999999999999999998775
No 46
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=94.74 E-value=0.17 Score=52.34 Aligned_cols=133 Identities=13% Similarity=0.090 Sum_probs=84.8
Q ss_pred CceeEEEEE-eCCCCchHHHHHHHHhhCCceEEEEEEEec---CCeEEEEEEEEccCCCCCCChhHHHHHHHHHHHHHhh
Q 048063 290 KGYSIVSVD-CKDRPRLMFDTVCTLTDMQYVVFHASIGCH---GDYAFQEYFIRHIDGYALNTEGEKERVIKCLEAAIER 365 (484)
Q Consensus 290 ~~~t~V~V~-~~DrpgLl~~i~~~L~~~~l~I~~A~i~t~---~g~a~d~f~V~~~~g~~~~~~~~~e~l~~~L~~~l~r 365 (484)
.+.+.|.|. .+|+||.++++...|++.|+||..-...+. .|...-+|+|-..+ ..+..++.+.+...+.-
T Consensus 262 ~~~~~i~v~~~~~~~g~~~~If~~La~~~I~vd~I~q~~s~~~~g~~~isf~v~~~~------~~~a~~~l~~~~~~~~~ 335 (421)
T 3ab4_A 262 KSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVFSVEDGTTDITFTCPRSD------GRRAMEILKKLQVQGNW 335 (421)
T ss_dssp CSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCEEEEECCCC--CCEEEEEEEEETTT------HHHHHHHHHHHHTTTTC
T ss_pred CCEEEEEEeccCCcccHHHHHHHHHHHcCCcEEEEEccCccccCCcceEEEEEechh------HHHHHHHHHHHHHHcCC
Confidence 356677887 699999999999999999999987655343 34444456664311 11222222222222221
Q ss_pred ----ccCCceEEEEEec---CCcchHHHHHHHHHhCCceEEEEEeeecCCeeeeEEEEEcCCCCCCChHHHHHHHHHh
Q 048063 366 ----RVCEGVRLELCAA---NRVGLLSDITRVLRENGLAVVRAHVATKGEKSVNAFYLRDISGNEVDMDFVESMKKEI 436 (484)
Q Consensus 366 ----r~~~~t~leV~a~---DRpGLL~~It~~f~~~gi~I~~A~i~T~g~~a~d~F~v~~~~g~~l~~~~~~~l~~~L 436 (484)
-......+.|.+. ++||+++.+.++|.+.||||.... |. ...-.|.|...+. ++.++.|.+++
T Consensus 336 ~~v~~~~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~is--~S--e~~is~vV~~~d~----~~Av~~Lh~~f 405 (421)
T 3ab4_A 336 TNVLYDDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELIS--TS--EIRISVLIREDDL----DAAARALHEQF 405 (421)
T ss_dssp SEEEEECCEEEEEEECGGGTSCTTHHHHHHHHHHHTTCCCCEEE--EE--TTEEEEEEEGGGH----HHHHHHHHHHT
T ss_pred ceEEEeCCeEEEEEEccCcccCccHHHHHHHHHHHCCCCEEEEE--cC--CCeEEEEEeHHHH----HHHHHHHHHHH
Confidence 0112466888886 799999999999999999999654 22 2333466643311 23567788887
No 47
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=93.21 E-value=1 Score=47.18 Aligned_cols=114 Identities=15% Similarity=0.216 Sum_probs=72.0
Q ss_pred CeEEEEEEe---cCCCcHHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEeeCCCCCCCcHHHHHHHHHHHccCCCCCC
Q 048063 36 DCTVVKVDS---VSKQGLLLEMVQVLTDMNLTISKSYISSDAGWFMDVFHVKDEHGNKLTDQKVINYIQQAIGTTGEIPS 112 (484)
Q Consensus 36 ~~t~I~V~~---~DrpGLfa~ia~vL~~~glnI~~A~Itt~~g~~~d~F~V~d~~g~~~~~~~~~~~L~~~L~~~~~~~~ 112 (484)
+.+.|+|.+ +++||+.+++..+|+++|+||.--...+... --.|.|...+ .++..+.|++.+.+..+ +.
T Consensus 317 ~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~IsQ~tse~--~Is~~V~~~d-----~~~a~~~L~~~l~~~~~-~~ 388 (473)
T 3c1m_A 317 NVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQGSSET--NISLVVSEED-----VDKALKALKREFGDFGK-KS 388 (473)
T ss_dssp EEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEECCTTC--CEEEEEEGGG-----HHHHHHHHHHHHCC-----C
T ss_pred CeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEEEEecCCCC--EEEEEEechH-----HHHHHHHHHHHHhhhcc-cc
Confidence 457788885 7888999999999999999998655433221 2346765321 13455666665511000 01
Q ss_pred ccccccccceeeecCCCCCCeEEEEEEec---CCCchHHHHHHHHHhCCCeEE
Q 048063 113 SAVAKTYTNKAVFGSEYPSEHTAIEMTGT---DRPGLFSEISAALADLHCNIV 162 (484)
Q Consensus 113 ~~~~~~~~~v~v~~~~~~~~~t~i~V~~~---DrpGLL~~Ia~vL~~~glnI~ 162 (484)
|.....-..+. + ..+...+.|.+. ++||.++++..+|++.|+||.
T Consensus 389 ~~~~~~~~~v~-~----~~~~a~vsvVG~gm~~~~Gvaak~f~aL~~~~InI~ 436 (473)
T 3c1m_A 389 FLNNNLIRDVS-V----DKDVCVISVVGAGMRGAKGIAGKIFTAVSESGANIK 436 (473)
T ss_dssp TTSCCCEEEEE-E----EEEEEEEEEECTTTTTCTTHHHHHHHHHHHHTCCCC
T ss_pred cccccccceEE-E----eCCcEEEEEEecCCCCChhHHHHHHHHHHHCCCCEE
Confidence 11000001233 2 235678888885 699999999999999999993
No 48
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=91.08 E-value=0.52 Score=46.11 Aligned_cols=56 Identities=18% Similarity=0.265 Sum_probs=44.3
Q ss_pred eEEEEEecCCcchHHHHHHHHHhCCceEEEEEeeecCCe-eeeEEEEEcCCCCCCChH
Q 048063 371 VRLELCAANRVGLLSDITRVLRENGLAVVRAHVATKGEK-SVNAFYLRDISGNEVDMD 427 (484)
Q Consensus 371 t~leV~a~DRpGLL~~It~~f~~~gi~I~~A~i~T~g~~-a~d~F~v~~~~g~~l~~~ 427 (484)
|.|-+...|+||-|+++-..|+.+|||+.+.+-+-...+ .+=.||| |.+|..-++.
T Consensus 201 tsl~f~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~Ffv-D~eg~~~d~~ 257 (283)
T 2qmx_A 201 TSIVFALPNEQGSLFRALATFALRGIDLTKIESRPSRKKAFEYLFYA-DFIGHREDQN 257 (283)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTEEEEEE-EEESCTTSHH
T ss_pred EEEEEEcCCCCchHHHHHHHHHHcCCCeeEEEeeEcCCCCcceEEEE-EEecCCCcHH
Confidence 556666679999999999999999999999998866555 5567777 6678764443
No 49
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=90.59 E-value=0.51 Score=48.53 Aligned_cols=62 Identities=21% Similarity=0.382 Sum_probs=48.6
Q ss_pred ceEEEEEecCCcchHHHHHHHHHhCCceEEEEEeeecCCeeeeEEEEEcCCCC-CCChHHHHHHHH
Q 048063 370 GVRLELCAANRVGLLSDITRVLRENGLAVVRAHVATKGEKSVNAFYLRDISGN-EVDMDFVESMKK 434 (484)
Q Consensus 370 ~t~leV~a~DRpGLL~~It~~f~~~gi~I~~A~i~T~g~~a~d~F~v~~~~g~-~l~~~~~~~l~~ 434 (484)
...|-+.-.|+||.+..|+.+|.++||||......+.|+.+--++-+. +. +++++.+++|++
T Consensus 331 ~~rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r~g~~A~~vidvD---~~~~~~~~~l~~l~~ 393 (404)
T 1sc6_A 331 GRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDIE---ADEDVAEKALQAMKA 393 (404)
T ss_dssp SEEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEECSSEEEEEEEEE---CCHHHHHHHHHHHHT
T ss_pred cceEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccCCCCEEEEEEEcC---CCCCCCHHHHHHHhc
Confidence 356778889999999999999999999999999999777776666663 22 144556677754
No 50
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=90.09 E-value=1.7 Score=45.54 Aligned_cols=129 Identities=12% Similarity=0.186 Sum_probs=83.3
Q ss_pred CceeEEEEEe---CCCCchHHHHHHHHhhCCceEEEEEEEecCCeEEEEEEEEccCCCCCCChhHHHHHHHHHHHHH---
Q 048063 290 KGYSIVSVDC---KDRPRLMFDTVCTLTDMQYVVFHASIGCHGDYAFQEYFIRHIDGYALNTEGEKERVIKCLEAAI--- 363 (484)
Q Consensus 290 ~~~t~V~V~~---~DrpgLl~~i~~~L~~~~l~I~~A~i~t~~g~a~d~f~V~~~~g~~~~~~~~~e~l~~~L~~~l--- 363 (484)
.+...|.|.+ +++||+.+++..+|++.|+||.--...+... --+|+|... ..++..+.|.+.+
T Consensus 316 ~~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~IsQ~tse~--~Is~~V~~~---------d~~~a~~~L~~~l~~~ 384 (473)
T 3c1m_A 316 KNVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQGSSET--NISLVVSEE---------DVDKALKALKREFGDF 384 (473)
T ss_dssp EEEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEECCTTC--CEEEEEEGG---------GHHHHHHHHHHHHCC-
T ss_pred CCeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEEEEecCCCC--EEEEEEech---------HHHHHHHHHHHHHhhh
Confidence 4667888886 6788999999999999999998655533221 223555432 2344555555555
Q ss_pred -----hhc--c------CCceEEEEEec---CCcchHHHHHHHHHhCCceEEEEEeeecCCeee-eEEEEEcCCCCCCCh
Q 048063 364 -----ERR--V------CEGVRLELCAA---NRVGLLSDITRVLRENGLAVVRAHVATKGEKSV-NAFYLRDISGNEVDM 426 (484)
Q Consensus 364 -----~rr--~------~~~t~leV~a~---DRpGLL~~It~~f~~~gi~I~~A~i~T~g~~a~-d~F~v~~~~g~~l~~ 426 (484)
... . +....+.|.+. ++||+++.+.++|.+.||||.... +|.+.. -.|.|...+. +
T Consensus 385 ~~~~~~~~~~~~~v~~~~~~a~vsvVG~gm~~~~Gvaak~f~aL~~~~InI~mis---qgtSe~~Is~vV~~~d~----~ 457 (473)
T 3c1m_A 385 GKKSFLNNNLIRDVSVDKDVCVISVVGAGMRGAKGIAGKIFTAVSESGANIKMIA---QGSSEVNISFVIDEKDL----L 457 (473)
T ss_dssp ---CTTSCCCEEEEEEEEEEEEEEEECTTTTTCTTHHHHHHHHHHHHTCCCCEEE---ESSCSSEEEEEEEGGGH----H
T ss_pred cccccccccccceEEEeCCcEEEEEEecCCCCChhHHHHHHHHHHHCCCCEEEEe---cCCCCceEEEEEcHHHH----H
Confidence 211 1 11456788886 599999999999999999995543 444433 3455543311 2
Q ss_pred HHHHHHHHHh
Q 048063 427 DFVESMKKEI 436 (484)
Q Consensus 427 ~~~~~l~~~L 436 (484)
..++.|.+++
T Consensus 458 ~Av~aLh~~f 467 (473)
T 3c1m_A 458 NCVRKLHEKF 467 (473)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3556677766
No 51
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=89.97 E-value=1.1 Score=47.66 Aligned_cols=64 Identities=16% Similarity=0.201 Sum_probs=48.7
Q ss_pred CCCCeEEEEEEecCCCchHHHHHHHHHhCCCeEEEEEEEec--CCeeEEEEEEEeCCCCCCCCChhHHHHHH
Q 048063 129 YPSEHTAIEMTGTDRPGLFSEISAALADLHCNIVEAHAWSH--NDRLACVAYVSDQSTDTPIDDPGRLATIE 198 (484)
Q Consensus 129 ~~~~~t~i~V~~~DrpGLL~~Ia~vL~~~glnI~~A~i~T~--~~~~~dvF~V~~~~~g~~i~d~~~~~~l~ 198 (484)
..+.+..+.+.-.|+||.+.+|+..|.++|+||.+.++... ++.+.-++.+... +. ++.+++|+
T Consensus 450 ~~~~~~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~vd~~-----~~-~~~l~~l~ 515 (529)
T 1ygy_A 450 LRAQGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRLDQD-----VP-DDVRTAIA 515 (529)
T ss_dssp EESCSEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEESSC-----CC-HHHHHHHH
T ss_pred ecCCccEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEECCC-----CC-HHHHHHHh
Confidence 34567888999999999999999999999999999999863 4556666655433 32 45555554
No 52
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=89.70 E-value=0.85 Score=46.82 Aligned_cols=50 Identities=14% Similarity=0.171 Sum_probs=43.1
Q ss_pred CeEEEEEEecCCCchHHHHHHHHHhCCCeEEEEEEEecCCeeEEEEEEEe
Q 048063 132 EHTAIEMTGTDRPGLFSEISAALADLHCNIVEAHAWSHNDRLACVAYVSD 181 (484)
Q Consensus 132 ~~t~i~V~~~DrpGLL~~Ia~vL~~~glnI~~A~i~T~~~~~~dvF~V~~ 181 (484)
+...|.+.-.|+||.+..|+.+|.++|+||....+.+.++.+.-++.+..
T Consensus 330 ~~~rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r~g~~A~~vidvD~ 379 (404)
T 1sc6_A 330 GGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDIEA 379 (404)
T ss_dssp SSEEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEECSSEEEEEEEEEC
T ss_pred CcceEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccCCCCEEEEEEEcCC
Confidence 45668889999999999999999999999999999997777777666543
No 53
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=88.90 E-value=0.86 Score=45.18 Aligned_cols=66 Identities=15% Similarity=0.245 Sum_probs=48.5
Q ss_pred ceEEEEEec-CCcchHHHHHHHHHhCCceEEEEEeeecCCe-eeeEEEEEcCCCCCCChH---HHHHHHHHh
Q 048063 370 GVRLELCAA-NRVGLLSDITRVLRENGLAVVRAHVATKGEK-SVNAFYLRDISGNEVDMD---FVESMKKEI 436 (484)
Q Consensus 370 ~t~leV~a~-DRpGLL~~It~~f~~~gi~I~~A~i~T~g~~-a~d~F~v~~~~g~~l~~~---~~~~l~~~L 436 (484)
.|.|-+... |+||-|+++-..|+.+|||+.+.+-+-...+ .+=.||| |.+|..-++. .++.|+...
T Consensus 201 kTSl~f~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~Ffi-D~eg~~~d~~v~~aL~~L~~~~ 271 (313)
T 3mwb_A 201 KTTVVVPLPEDHPGALMEILDQFASRGVNLSRIESRPTGQYLGHYFFSI-DADGHATDSRVADALAGLHRIS 271 (313)
T ss_dssp EEEEEEECSSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTSEEEEE-EEESCTTSHHHHHHHHHHHHHC
T ss_pred eEEEEEEeCCCCCCHHHHHHHHHHHCCccEEEEEEeecCCCCccEEEEE-EEeCCCCcHHHHHHHHHHHHhc
Confidence 366767775 9999999999999999999999998865554 4557787 6677664443 334555543
No 54
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=88.77 E-value=5.4 Score=41.39 Aligned_cols=108 Identities=16% Similarity=0.216 Sum_probs=69.0
Q ss_pred CeEEEEEEe---cCCCcHHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEeeCCCCCCCcHHHHHHHHHHHccCCCCCC
Q 048063 36 DCTVVKVDS---VSKQGLLLEMVQVLTDMNLTISKSYISSDAGWFMDVFHVKDEHGNKLTDQKVINYIQQAIGTTGEIPS 112 (484)
Q Consensus 36 ~~t~I~V~~---~DrpGLfa~ia~vL~~~glnI~~A~Itt~~g~~~d~F~V~d~~g~~~~~~~~~~~L~~~L~~~~~~~~ 112 (484)
+.+.|+|.+ ++.||..+++..+|+++|+||.- |++... --.|.|...+-.. ....+.+.|...
T Consensus 297 ~~~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd~--i~~~~~--~is~~V~~~d~~~-----~~~~~~~el~~~----- 362 (446)
T 3tvi_A 297 NFTVIAIEKALLNSEVGFCRKILSILEMYGVSFEH--MPSGVD--SVSLVIEDCKLDG-----KCDKIIEEIKKQ----- 362 (446)
T ss_dssp EEEEEEEECTTGGGSTTHHHHHHHHHHTTTCCEEE--BCEETT--EEEEEEEHHHHTT-----THHHHHHHHHHH-----
T ss_pred CEEEEEEEecCCCccHHHHHHHHHHHHHcCCcEEE--EecCCC--EEEEEEecchHHH-----HHHHHHHHHHHh-----
Confidence 345677775 68999999999999999999973 222221 2236665321110 122222223221
Q ss_pred ccccccccceeeecCCCCCCeEEEEEEec---CCCchHHHHHHHHHhCCCeEEEEEE
Q 048063 113 SAVAKTYTNKAVFGSEYPSEHTAIEMTGT---DRPGLFSEISAALADLHCNIVEAHA 166 (484)
Q Consensus 113 ~~~~~~~~~v~v~~~~~~~~~t~i~V~~~---DrpGLL~~Ia~vL~~~glnI~~A~i 166 (484)
+. +..+. ++ .+...|.|.+. .+||+.+++..+|++.|+||....-
T Consensus 363 ~~----~~~v~-v~----~~vA~VSvVG~gM~~~~Gvaarif~aLa~~~InI~mIsq 410 (446)
T 3tvi_A 363 CN----PDSIE-IH----PNMALVATVGTGMAKTKGIANKIFTALSKENVNIRMIDQ 410 (446)
T ss_dssp SC----CSEEE-EE----EEEEEEEEECGGGSSCTTHHHHHHHHHHHTTCCEEEEEE
T ss_pred cC----CCcEE-Ee----CCeEEEEEECCCccCChhHHHHHHHHHHHCCCCEEEEEe
Confidence 10 11233 22 25788888875 5999999999999999999987653
No 55
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=88.54 E-value=1.9 Score=43.07 Aligned_cols=48 Identities=15% Similarity=0.290 Sum_probs=38.9
Q ss_pred CCcchHHHHHHHHHhCCceEEEEEeeecCCee-eeEEEEEcCCCCCCChH
Q 048063 379 NRVGLLSDITRVLRENGLAVVRAHVATKGEKS-VNAFYLRDISGNEVDMD 427 (484)
Q Consensus 379 DRpGLL~~It~~f~~~gi~I~~A~i~T~g~~a-~d~F~v~~~~g~~l~~~ 427 (484)
|+||-|+++-..|+.+|||+.+.+-+-...+- +=.||| |.+|..-++.
T Consensus 217 ~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~Ffi-D~eg~~~d~~ 265 (329)
T 3luy_A 217 TGPGVLANLLDVFRDAGLNMTSFISRPIKGRTGTYSFIV-TLDAAPWEER 265 (329)
T ss_dssp CSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEEE-EESSCTTSHH
T ss_pred CCCCHHHHHHHHHHHCCcceEEEEeeECCCCCccEEEEE-EEeCCcCCHH
Confidence 79999999999999999999999988666554 557776 7778764543
No 56
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=87.99 E-value=1.6 Score=46.28 Aligned_cols=61 Identities=21% Similarity=0.352 Sum_probs=49.1
Q ss_pred ceEEEEEecCCcchHHHHHHHHHhCCceEEEEEeeec--CCeeeeEEEEEcCCCCCCChHHHHHHHH
Q 048063 370 GVRLELCAANRVGLLSDITRVLRENGLAVVRAHVATK--GEKSVNAFYLRDISGNEVDMDFVESMKK 434 (484)
Q Consensus 370 ~t~leV~a~DRpGLL~~It~~f~~~gi~I~~A~i~T~--g~~a~d~F~v~~~~g~~l~~~~~~~l~~ 434 (484)
.+.+-+.-.|+||.+..|+..|.++||||.+.++... |+.+.-.+.+ ..+++++..++|++
T Consensus 454 ~~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~v----d~~~~~~~l~~l~~ 516 (529)
T 1ygy_A 454 GINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRL----DQDVPDDVRTAIAA 516 (529)
T ss_dssp SEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEE----SSCCCHHHHHHHHH
T ss_pred ccEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEE----CCCCCHHHHHHHhc
Confidence 6888899999999999999999999999999999765 3445545555 34567778788875
No 57
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=87.01 E-value=1.7 Score=42.10 Aligned_cols=50 Identities=10% Similarity=0.209 Sum_probs=41.0
Q ss_pred ceEEEEEe---cCCcchHHHHHHHHHhCCceEEEEEeeecCCe-eeeEEEEEcCC
Q 048063 370 GVRLELCA---ANRVGLLSDITRVLRENGLAVVRAHVATKGEK-SVNAFYLRDIS 420 (484)
Q Consensus 370 ~t~leV~a---~DRpGLL~~It~~f~~~gi~I~~A~i~T~g~~-a~d~F~v~~~~ 420 (484)
.|.|-+.. .|+||-|+++-..|+.+|||+.+.+-+-...+ .+=.||| |.+
T Consensus 186 ktsl~f~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~Ffi-D~e 239 (267)
T 2qmw_A 186 ATSLMFLITPMHDKPGLLASVLNTFALFNINLSWIESRPLKTQLGMYRFFV-QAD 239 (267)
T ss_dssp CSEEEEEEEESSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTCEEEEE-EES
T ss_pred eEEEEEEcCCCCCCcChHHHHHHHHHHcCCCeeEEEEeecCCCCccEEEEE-EEe
Confidence 35577777 89999999999999999999999998866554 5668888 555
No 58
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=86.07 E-value=3.1 Score=40.52 Aligned_cols=51 Identities=12% Similarity=0.116 Sum_probs=42.5
Q ss_pred CeEEEEEEecCCCchHHHHHHHHHhCCCeEEEEEEEec-CCeeEEEEEEEeC
Q 048063 132 EHTAIEMTGTDRPGLFSEISAALADLHCNIVEAHAWSH-NDRLACVAYVSDQ 182 (484)
Q Consensus 132 ~~t~i~V~~~DrpGLL~~Ia~vL~~~glnI~~A~i~T~-~~~~~dvF~V~~~ 182 (484)
..|.|.+..+|+||-|+++-+.|+.+|+|+........ +....-.|||.-.
T Consensus 199 ~ktsl~f~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfvD~e 250 (283)
T 2qmx_A 199 QKTSIVFALPNEQGSLFRALATFALRGIDLTKIESRPSRKKAFEYLFYADFI 250 (283)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTEEEEEEEEE
T ss_pred ceEEEEEEcCCCCchHHHHHHHHHHcCCCeeEEEeeEcCCCCcceEEEEEEe
Confidence 45777777889999999999999999999999887764 4446678998765
No 59
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=84.97 E-value=1.6 Score=44.96 Aligned_cols=48 Identities=15% Similarity=0.229 Sum_probs=40.9
Q ss_pred CeEEEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEE
Q 048063 36 DCTVVKVDSVSKQGLLLEMVQVLTDMNLTISKSYISSDAGWFMDVFHV 83 (484)
Q Consensus 36 ~~t~I~V~~~DrpGLfa~ia~vL~~~glnI~~A~Itt~~g~~~d~F~V 83 (484)
+...|++.=.|+||.+.+|..+|+++|+||.+-...|.++++.-+.-|
T Consensus 342 ~~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~~~~~~~y~~~d~ 389 (416)
T 3k5p_A 342 TGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQTDGEVGYLVMEA 389 (416)
T ss_dssp SSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEE
T ss_pred CceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhccCCCceEEEEEEe
Confidence 568999999999999999999999999999987778888877533333
No 60
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=83.38 E-value=3.9 Score=42.44 Aligned_cols=131 Identities=10% Similarity=0.103 Sum_probs=81.7
Q ss_pred CceeEEEEEe---CCCCchHHHHHHHHhhCCceEEEEEEEecCCeEEEEEEEEccCCCCCCChhHHHHHHHHHHHHHh-h
Q 048063 290 KGYSIVSVDC---KDRPRLMFDTVCTLTDMQYVVFHASIGCHGDYAFQEYFIRHIDGYALNTEGEKERVIKCLEAAIE-R 365 (484)
Q Consensus 290 ~~~t~V~V~~---~DrpgLl~~i~~~L~~~~l~I~~A~i~t~~g~a~d~f~V~~~~g~~~~~~~~~e~l~~~L~~~l~-r 365 (484)
.+.+.|.|.+ ++.||..+++...|++.+++|..- ++... --+|.|...+-. ...+.+.+.|...+. .
T Consensus 296 ~~~~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd~i--~~~~~--~is~~V~~~d~~-----~~~~~~~~el~~~~~~~ 366 (446)
T 3tvi_A 296 KNFTVIAIEKALLNSEVGFCRKILSILEMYGVSFEHM--PSGVD--SVSLVIEDCKLD-----GKCDKIIEEIKKQCNPD 366 (446)
T ss_dssp EEEEEEEEECTTGGGSTTHHHHHHHHHHTTTCCEEEB--CEETT--EEEEEEEHHHHT-----TTHHHHHHHHHHHSCCS
T ss_pred CCEEEEEEEecCCCccHHHHHHHHHHHHHcCCcEEEE--ecCCC--EEEEEEecchHH-----HHHHHHHHHHHHhcCCC
Confidence 3566788886 699999999999999999999742 22211 223555442211 023444444444331 0
Q ss_pred c---cCCceEEEEEec---CCcchHHHHHHHHHhCCceEEEEEeeecCCe-eeeEEEEEcCCCCCCChHHHHHHHHHh
Q 048063 366 R---VCEGVRLELCAA---NRVGLLSDITRVLRENGLAVVRAHVATKGEK-SVNAFYLRDISGNEVDMDFVESMKKEI 436 (484)
Q Consensus 366 r---~~~~t~leV~a~---DRpGLL~~It~~f~~~gi~I~~A~i~T~g~~-a~d~F~v~~~~g~~l~~~~~~~l~~~L 436 (484)
. ......|.|++. .+||+.+.+.++|.+.||||.... +|.. ..=.|.|...+. +..+..|.+++
T Consensus 367 ~v~v~~~vA~VSvVG~gM~~~~Gvaarif~aLa~~~InI~mIs---qgtSei~Is~vV~~~d~----~~Av~aLH~~f 437 (446)
T 3tvi_A 367 SIEIHPNMALVATVGTGMAKTKGIANKIFTALSKENVNIRMID---QGSSEINVIVGVETVDF----EKAVKSIYNAF 437 (446)
T ss_dssp EEEEEEEEEEEEEECGGGSSCTTHHHHHHHHHHHTTCCEEEEE---ECSCTTEEEEEEEGGGH----HHHHHHHHHHH
T ss_pred cEEEeCCeEEEEEECCCccCChhHHHHHHHHHHHCCCCEEEEE---ecCCCceEEEEEcHHHH----HHHHHHHHHHH
Confidence 0 112577888886 589999999999999999998876 3333 233466643311 22455666655
No 61
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=83.36 E-value=5.8 Score=40.75 Aligned_cols=50 Identities=16% Similarity=0.209 Sum_probs=43.0
Q ss_pred CCeEEEEEEecCCCchHHHHHHHHHhCCCeEEEEEEEecCCeeEEEEEEE
Q 048063 131 SEHTAIEMTGTDRPGLFSEISAALADLHCNIVEAHAWSHNDRLACVAYVS 180 (484)
Q Consensus 131 ~~~t~i~V~~~DrpGLL~~Ia~vL~~~glnI~~A~i~T~~~~~~dvF~V~ 180 (484)
.....|.+.-.|+||.|..|..+|+++|+||..-...|.++.+.-+.-|.
T Consensus 341 ~~~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~~~~~~~y~~~d~~ 390 (416)
T 3k5p_A 341 PTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQTDGEVGYLVMEAD 390 (416)
T ss_dssp SSSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEEC
T ss_pred CCceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhccCCCceEEEEEEec
Confidence 35689999999999999999999999999999999999887765554443
No 62
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=82.97 E-value=0.99 Score=46.96 Aligned_cols=34 Identities=32% Similarity=0.473 Sum_probs=30.4
Q ss_pred ceEEEEEecCCcchHHHHHHHHHhCCceEEEEEe
Q 048063 370 GVRLELCAANRVGLLSDITRVLRENGLAVVRAHV 403 (484)
Q Consensus 370 ~t~leV~a~DRpGLL~~It~~f~~~gi~I~~A~i 403 (484)
.|-+.+...|+||.|++|+.+|.++||+|.+..=
T Consensus 359 ~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~~~q 392 (444)
T 3mtj_A 359 AYYLRLRAFDRPGVLADITRILADSSISIDAMVQ 392 (444)
T ss_dssp EEEEEEEEC-CCHHHHHHHHHHHHTTCCEEEEEE
T ss_pred eeEEEEEecCcccHHHHHHHHHHhcCCceeEEee
Confidence 5889999999999999999999999999988753
No 63
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=82.08 E-value=3.2 Score=43.10 Aligned_cols=52 Identities=17% Similarity=0.257 Sum_probs=37.4
Q ss_pred CCeEEEEEEecCCCchHHHHHHHHHhCCCeEEEEEEEec--CCeeEEEEEEEeC
Q 048063 131 SEHTAIEMTGTDRPGLFSEISAALADLHCNIVEAHAWSH--NDRLACVAYVSDQ 182 (484)
Q Consensus 131 ~~~t~i~V~~~DrpGLL~~Ia~vL~~~glnI~~A~i~T~--~~~~~dvF~V~~~ 182 (484)
...+-+.+...|+||.|++|+++|.++|++|.+..-.-. ++....+..+|..
T Consensus 357 ~~~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~~~q~~~~~~~~~~~~v~~th~ 410 (444)
T 3mtj_A 357 RTAYYLRLRAFDRPGVLADITRILADSSISIDAMVQKEPAEGEEQVDIILLTHV 410 (444)
T ss_dssp EEEEEEEEEEC-CCHHHHHHHHHHHHTTCCEEEEEECC------CEEEEEEECS
T ss_pred ceeeEEEEEecCcccHHHHHHHHHHhcCCceeEEeecccccCCCCceEEEEecc
Confidence 356788888999999999999999999999988764322 1223456666664
No 64
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=81.67 E-value=9 Score=38.09 Aligned_cols=50 Identities=10% Similarity=0.054 Sum_probs=38.4
Q ss_pred eEEEEEEec--CCCchHHHHHHHHHhCCCeEEEEEEEecC-CeeEEEEEEEeC
Q 048063 133 HTAIEMTGT--DRPGLFSEISAALADLHCNIVEAHAWSHN-DRLACVAYVSDQ 182 (484)
Q Consensus 133 ~t~i~V~~~--DrpGLL~~Ia~vL~~~glnI~~A~i~T~~-~~~~dvF~V~~~ 182 (484)
.+.+.+... |+||-|+++-+.|+.+|+|+......... ....=.|||.-.
T Consensus 206 kts~i~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~e 258 (329)
T 3luy_A 206 YESVLTLIPLVTGPGVLANLLDVFRDAGLNMTSFISRPIKGRTGTYSFIVTLD 258 (329)
T ss_dssp EEEEEEEECSCCSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEEEEES
T ss_pred ceEEEEEecCCCCCCHHHHHHHHHHHCCcceEEEEeeECCCCCccEEEEEEEe
Confidence 344444444 79999999999999999999988877644 445678888765
No 65
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=80.13 E-value=23 Score=37.21 Aligned_cols=137 Identities=8% Similarity=0.119 Sum_probs=84.3
Q ss_pred CeEEEEEEe---cCCCcHHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEeeCCCCCCC-cHHHHHHHHHHHccCCCCC
Q 048063 36 DCTVVKVDS---VSKQGLLLEMVQVLTDMNLTISKSYISSDAGWFMDVFHVKDEHGNKLT-DQKVINYIQQAIGTTGEIP 111 (484)
Q Consensus 36 ~~t~I~V~~---~DrpGLfa~ia~vL~~~glnI~~A~Itt~~g~~~d~F~V~d~~g~~~~-~~~~~~~L~~~L~~~~~~~ 111 (484)
+.+.|+|.+ .+++|..+++-.+|+++|+||.-- .++... -+|.|...+..... ..+.++.+.+.|..
T Consensus 340 ~~~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd~I-~sse~s---is~~v~~~~~~~~~~~~~~l~~~~~el~~----- 410 (510)
T 2cdq_A 340 NVTMLDIASTRMLGQVGFLAKVFSIFEELGISVDVV-ATSEVS---ISLTLDPSKLWSRELIQQELDHVVEELEK----- 410 (510)
T ss_dssp EEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEEE-EEETTE---EEEEECCGGGSSSCCCHHHHHHHHHHHTT-----
T ss_pred CeEEEEEEcCCCCCcccHHHHHHHHHHHcCCcEEEE-EeCCCe---EEEEEechHhhhhhHHHHHHHHHHHHhCC-----
Confidence 456788875 789999999999999999999854 233322 23666432211100 12334444444432
Q ss_pred CccccccccceeeecCCCCCCeEEEEEEec--CCCchHHHHHHHHHhCCCeEEEEEEEecCCeeE-EEEEEEeCCCCCCC
Q 048063 112 SSAVAKTYTNKAVFGSEYPSEHTAIEMTGT--DRPGLFSEISAALADLHCNIVEAHAWSHNDRLA-CVAYVSDQSTDTPI 188 (484)
Q Consensus 112 ~~~~~~~~~~v~v~~~~~~~~~t~i~V~~~--DrpGLL~~Ia~vL~~~glnI~~A~i~T~~~~~~-dvF~V~~~~~g~~i 188 (484)
+ ..+. ++ .+...|.|.+. ..||+.+++..+|++.|+||.... .|..-. -.|.|..
T Consensus 411 -~------~~v~-~~----~~~a~VsiVG~m~~~~Gvaa~~f~aL~~~~InI~mIs---qGsSei~Is~vV~~------- 468 (510)
T 2cdq_A 411 -I------AVVN-LL----KGRAIISLIGNVQHSSLILERAFHVLYTKGVNVQMIS---QGASKVNISFIVNE------- 468 (510)
T ss_dssp -T------SEEE-EE----EEEEEEEEEECGGGHHHHHHHHHHHHHHHTCCCSEEE---ECTTCSEEEEEEEH-------
T ss_pred -C------CeEE-Ee----CCcEEEEEEEECCCChhHHHHHHHHHHHCCCCEEEEE---ecCCcceEEEEEeH-------
Confidence 1 1233 22 25677888876 788999999999999999998764 332222 2344433
Q ss_pred CChhHHHHHHHHHHHHhc
Q 048063 189 DDPGRLATIEEYITTVLR 206 (484)
Q Consensus 189 ~d~~~~~~l~~~L~~~L~ 206 (484)
+..++.-++|++++-
T Consensus 469 ---~d~~~Av~aLH~~f~ 483 (510)
T 2cdq_A 469 ---AEAEGCVQALHKSFF 483 (510)
T ss_dssp ---HHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHh
Confidence 334566667777664
No 66
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=79.32 E-value=7.4 Score=38.43 Aligned_cols=51 Identities=16% Similarity=0.169 Sum_probs=41.4
Q ss_pred CeEEEEEEec-CCCchHHHHHHHHHhCCCeEEEEEEEec-CCeeEEEEEEEeC
Q 048063 132 EHTAIEMTGT-DRPGLFSEISAALADLHCNIVEAHAWSH-NDRLACVAYVSDQ 182 (484)
Q Consensus 132 ~~t~i~V~~~-DrpGLL~~Ia~vL~~~glnI~~A~i~T~-~~~~~dvF~V~~~ 182 (484)
..|.|.+..+ |+||-|+++-+.|+.+|+|+........ +....=.|||.-.
T Consensus 200 ~kTSl~f~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~e 252 (313)
T 3mwb_A 200 DKTTVVVPLPEDHPGALMEILDQFASRGVNLSRIESRPTGQYLGHYFFSIDAD 252 (313)
T ss_dssp EEEEEEEECSSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTSEEEEEEEE
T ss_pred CeEEEEEEeCCCCCCHHHHHHHHHHHCCccEEEEEEeecCCCCccEEEEEEEe
Confidence 5678888885 9999999999999999999998887753 3344567888765
No 67
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=77.69 E-value=4.9 Score=42.44 Aligned_cols=134 Identities=12% Similarity=0.167 Sum_probs=82.3
Q ss_pred CceeEEEEEe---CCCCchHHHHHHHHhhCCceEEEEEEEecCCeEEEEEEEEccCCCCCC-ChhHHHHHHHHHHHHHhh
Q 048063 290 KGYSIVSVDC---KDRPRLMFDTVCTLTDMQYVVFHASIGCHGDYAFQEYFIRHIDGYALN-TEGEKERVIKCLEAAIER 365 (484)
Q Consensus 290 ~~~t~V~V~~---~DrpgLl~~i~~~L~~~~l~I~~A~i~t~~g~a~d~f~V~~~~g~~~~-~~~~~e~l~~~L~~~l~r 365 (484)
.+.+.|.|.+ .+++|+.+++..+|++.|++|..-. +..... +|.|...+..... ....++.+.+.|.. + .
T Consensus 339 ~~~~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd~I~-sse~si---s~~v~~~~~~~~~~~~~~l~~~~~el~~-~-~ 412 (510)
T 2cdq_A 339 RNVTMLDIASTRMLGQVGFLAKVFSIFEELGISVDVVA-TSEVSI---SLTLDPSKLWSRELIQQELDHVVEELEK-I-A 412 (510)
T ss_dssp EEEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEEEE-EETTEE---EEEECCGGGSSSCCCHHHHHHHHHHHTT-T-S
T ss_pred CCeEEEEEEcCCCCCcccHHHHHHHHHHHcCCcEEEEE-eCCCeE---EEEEechHhhhhhHHHHHHHHHHHHhCC-C-C
Confidence 3667888885 7899999999999999999998752 222222 3555433211110 11223333333222 0 0
Q ss_pred c---cCCceEEEEEec--CCcchHHHHHHHHHhCCceEEEEEeeecCCee-eeEEEEEcCCCCCCChHHHHHHHHHh
Q 048063 366 R---VCEGVRLELCAA--NRVGLLSDITRVLRENGLAVVRAHVATKGEKS-VNAFYLRDISGNEVDMDFVESMKKEI 436 (484)
Q Consensus 366 r---~~~~t~leV~a~--DRpGLL~~It~~f~~~gi~I~~A~i~T~g~~a-~d~F~v~~~~g~~l~~~~~~~l~~~L 436 (484)
. ......|.|.+. ..||+.+.+..+|.+.||||.... +|... .=.|.|...+. ...+..|.+++
T Consensus 413 ~v~~~~~~a~VsiVG~m~~~~Gvaa~~f~aL~~~~InI~mIs---qGsSei~Is~vV~~~d~----~~Av~aLH~~f 482 (510)
T 2cdq_A 413 VVNLLKGRAIISLIGNVQHSSLILERAFHVLYTKGVNVQMIS---QGASKVNISFIVNEAEA----EGCVQALHKSF 482 (510)
T ss_dssp EEEEEEEEEEEEEEECGGGHHHHHHHHHHHHHHHTCCCSEEE---ECTTCSEEEEEEEHHHH----HHHHHHHHHHH
T ss_pred eEEEeCCcEEEEEEEECCCChhHHHHHHHHHHHCCCCEEEEE---ecCCcceEEEEEeHHHH----HHHHHHHHHHH
Confidence 1 112467888887 788999999999999999998875 44443 33566644311 12556677776
No 68
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=76.40 E-value=11 Score=32.75 Aligned_cols=128 Identities=13% Similarity=0.135 Sum_probs=74.7
Q ss_pred CeEEEEEEe---cCCCcHHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEeeCCCCCCCcHHHHHHHHHHHccCCCCCC
Q 048063 36 DCTVVKVDS---VSKQGLLLEMVQVLTDMNLTISKSYISSDAGWFMDVFHVKDEHGNKLTDQKVINYIQQAIGTTGEIPS 112 (484)
Q Consensus 36 ~~t~I~V~~---~DrpGLfa~ia~vL~~~glnI~~A~Itt~~g~~~d~F~V~d~~g~~~~~~~~~~~L~~~L~~~~~~~~ 112 (484)
+.+.|+|.+ +++||..+++..+|+++|+||.- |++... --.|.|.+.+ ....+.+.|..
T Consensus 17 ~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~--I~~s~~--~Isf~v~~~~--------~~~~il~~l~~------ 78 (157)
T 3mah_A 17 GITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDM--VATSEV--GVSLTIDNDK--------NLPDIVRALSD------ 78 (157)
T ss_dssp EEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCSC--EECCSS--EEEEEESCCT--------THHHHHHHHTT------
T ss_pred CEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEEE--EEecCC--EEEEEECChH--------HHHHHHHHHhc------
Confidence 456788774 57899999999999999999853 223222 2346664321 12222223321
Q ss_pred ccccccccceeeecCCCCCCeEEEEEEec---CCCchHHHHHHHHHhCCCeEEEEEEEecCCeeEEEEEEEeCCCCCCCC
Q 048063 113 SAVAKTYTNKAVFGSEYPSEHTAIEMTGT---DRPGLFSEISAALADLHCNIVEAHAWSHNDRLACVAYVSDQSTDTPID 189 (484)
Q Consensus 113 ~~~~~~~~~v~v~~~~~~~~~t~i~V~~~---DrpGLL~~Ia~vL~~~glnI~~A~i~T~~~~~~dvF~V~~~~~g~~i~ 189 (484)
+ ..++ ++ .+...|.|.+. ++||+.+++..+|+ |+||....-.|.. .--.|.|...
T Consensus 79 ~------~~v~-~~----~~~a~vsvvG~gm~~~~gv~a~~f~aL~--~Ini~~isqg~Se--~~is~vv~~~------- 136 (157)
T 3mah_A 79 I------GDVT-VD----KDMVIICIVGDMEWDNVGFEARIINALK--GVPVRMISYGGSN--YNVSVLVKAE------- 136 (157)
T ss_dssp T------EEEE-EE----EEEEEEEEEC------CCHHHHHHHTTT--TSCCSEEEECSSS--SCEEEEEEGG-------
T ss_pred c------CeEE-Ee----CCeEEEEEECCCcccCccHHHHHHHHhC--CCCeEEEeeCCCC--CEEEEEEcHH-------
Confidence 1 1233 22 25678888864 78999999999999 9998775432322 2233444432
Q ss_pred ChhHHHHHHHHHHHHhc
Q 048063 190 DPGRLATIEEYITTVLR 206 (484)
Q Consensus 190 d~~~~~~l~~~L~~~L~ 206 (484)
..++..+.|++.+-
T Consensus 137 ---d~~~a~~~Lh~~f~ 150 (157)
T 3mah_A 137 ---DKKKALIALSNKLF 150 (157)
T ss_dssp ---GHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHh
Confidence 33455566666663
No 69
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=75.95 E-value=5.3 Score=38.58 Aligned_cols=51 Identities=16% Similarity=0.197 Sum_probs=41.2
Q ss_pred CCeEEEEEEe---cCCCchHHHHHHHHHhCCCeEEEEEEEecC-CeeEEEEEEEe
Q 048063 131 SEHTAIEMTG---TDRPGLFSEISAALADLHCNIVEAHAWSHN-DRLACVAYVSD 181 (484)
Q Consensus 131 ~~~t~i~V~~---~DrpGLL~~Ia~vL~~~glnI~~A~i~T~~-~~~~dvF~V~~ 181 (484)
...|.|.+.. .|+||-|+++-+.|+.+|+|+......... ....-.|||.-
T Consensus 184 ~~ktsl~f~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~ 238 (267)
T 2qmw_A 184 QNATSLMFLITPMHDKPGLLASVLNTFALFNINLSWIESRPLKTQLGMYRFFVQA 238 (267)
T ss_dssp SSCSEEEEEEEESSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTCEEEEEEE
T ss_pred CCeEEEEEEcCCCCCCcChHHHHHHHHHHcCCCeeEEEEeecCCCCccEEEEEEE
Confidence 3567777777 899999999999999999999998877643 34567788864
No 70
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=61.78 E-value=8.5 Score=39.55 Aligned_cols=50 Identities=18% Similarity=0.335 Sum_probs=40.5
Q ss_pred ceEEEEEecCCcchHHHHHHHHHhCCceEEEEEeeecCC-eeeeEEEEEcCC
Q 048063 370 GVRLELCAANRVGLLSDITRVLRENGLAVVRAHVATKGE-KSVNAFYLRDIS 420 (484)
Q Consensus 370 ~t~leV~a~DRpGLL~~It~~f~~~gi~I~~A~i~T~g~-~a~d~F~v~~~~ 420 (484)
.|.|-+...|+||-|+++-..|+.+|||+.+.+.+-... ..+=.||| |-+
T Consensus 34 KTSLiFsl~n~pGAL~~~L~~Fa~~gINLTkIESRPsk~~~~eY~FfV-D~e 84 (429)
T 1phz_A 34 AISLIFSLKEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFT-YLD 84 (429)
T ss_dssp CEEEEEEEECCTTHHHHHHHHHHTTTCCTTSEEEEECSSCTTEEEEEE-CBC
T ss_pred eEEEEEEeCCCccHHHHHHHHHHHcCCceEEEEeeecCCCCccEEEEE-EEe
Confidence 356777778999999999999999999999999876544 46668888 554
No 71
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=56.84 E-value=6.1 Score=34.55 Aligned_cols=124 Identities=13% Similarity=0.095 Sum_probs=72.8
Q ss_pred ceeEEEEEe---CCCCchHHHHHHHHhhCCceEEEEEEEecCCeEEEEEEEEccCCCCCCChhHHHHHHHHHHHHHhh-c
Q 048063 291 GYSIVSVDC---KDRPRLMFDTVCTLTDMQYVVFHASIGCHGDYAFQEYFIRHIDGYALNTEGEKERVIKCLEAAIER-R 366 (484)
Q Consensus 291 ~~t~V~V~~---~DrpgLl~~i~~~L~~~~l~I~~A~i~t~~g~a~d~f~V~~~~g~~~~~~~~~e~l~~~L~~~l~r-r 366 (484)
+.+.|.|.+ ++.||..+++..+|++.|++|..-. +... --+|+|.+.+ ..+++.+.|.+ ... .
T Consensus 17 ~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~I~--~s~~--~Isf~v~~~~--------~~~~il~~l~~-~~~v~ 83 (157)
T 3mah_A 17 GITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDMVA--TSEV--GVSLTIDNDK--------NLPDIVRALSD-IGDVT 83 (157)
T ss_dssp EEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCSCEE--CCSS--EEEEEESCCT--------THHHHHHHHTT-TEEEE
T ss_pred CEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEEEEE--ecCC--EEEEEECChH--------HHHHHHHHHhc-cCeEE
Confidence 456777774 6889999999999999999985432 2222 2235553221 23333333322 100 0
Q ss_pred -cCCceEEEEEec---CCcchHHHHHHHHHhCCceEEEEEeeecCCe-eeeEEEEEcCCCCCCChHHHHHHHHHh
Q 048063 367 -VCEGVRLELCAA---NRVGLLSDITRVLRENGLAVVRAHVATKGEK-SVNAFYLRDISGNEVDMDFVESMKKEI 436 (484)
Q Consensus 367 -~~~~t~leV~a~---DRpGLL~~It~~f~~~gi~I~~A~i~T~g~~-a~d~F~v~~~~g~~l~~~~~~~l~~~L 436 (484)
......|.|.+. ++||+.+.+..+|. ||+|.... +|.. ..=.|.|...+. +..++.|.+++
T Consensus 84 ~~~~~a~vsvvG~gm~~~~gv~a~~f~aL~--~Ini~~is---qg~Se~~is~vv~~~d~----~~a~~~Lh~~f 149 (157)
T 3mah_A 84 VDKDMVIICIVGDMEWDNVGFEARIINALK--GVPVRMIS---YGGSNYNVSVLVKAEDK----KKALIALSNKL 149 (157)
T ss_dssp EEEEEEEEEEEC------CCHHHHHHHTTT--TSCCSEEE---ECSSSSCEEEEEEGGGH----HHHHHHHHHHH
T ss_pred EeCCeEEEEEECCCcccCccHHHHHHHHhC--CCCeEEEe---eCCCCCEEEEEEcHHHH----HHHHHHHHHHH
Confidence 112466777775 68999999999999 99988765 3433 234566644311 23556677776
No 72
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=55.87 E-value=14 Score=38.06 Aligned_cols=52 Identities=4% Similarity=0.056 Sum_probs=41.2
Q ss_pred CCCeEEEEEEecCCCchHHHHHHHHHhCCCeEEEEEEEec-CCeeEEEEEEEe
Q 048063 130 PSEHTAIEMTGTDRPGLFSEISAALADLHCNIVEAHAWSH-NDRLACVAYVSD 181 (484)
Q Consensus 130 ~~~~t~i~V~~~DrpGLL~~Ia~vL~~~glnI~~A~i~T~-~~~~~dvF~V~~ 181 (484)
....|.|.+..+|+||-|+++-+.|+.+|+|+........ +....=.|||.-
T Consensus 31 g~dKTSLiFsl~n~pGAL~~~L~~Fa~~gINLTkIESRPsk~~~~eY~FfVD~ 83 (429)
T 1phz_A 31 QNGAISLIFSLKEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFTYL 83 (429)
T ss_dssp SSCCEEEEEEEECCTTHHHHHHHHHHTTTCCTTSEEEEECSSCTTEEEEEECB
T ss_pred CCCeEEEEEEeCCCccHHHHHHHHHHHcCCceEEEEeeecCCCCccEEEEEEE
Confidence 3457788888899999999999999999999988776653 344566788743
No 73
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=40.18 E-value=83 Score=25.40 Aligned_cols=49 Identities=12% Similarity=0.070 Sum_probs=36.7
Q ss_pred ceeEEEEEeCCCCchHHHHHHHHhhCCce-EEEEEEEecCCeEEEEEEEEccCCCCC
Q 048063 291 GYSIVSVDCKDRPRLMFDTVCTLTDMQYV-VFHASIGCHGDYAFQEYFIRHIDGYAL 346 (484)
Q Consensus 291 ~~t~V~V~~~DrpgLl~~i~~~L~~~~l~-I~~A~i~t~~g~a~d~f~V~~~~g~~~ 346 (484)
+++.+.+.+.| +..+...|.++|+. +...-.....|.. |++.|++|..|
T Consensus 66 ~~~~l~f~v~d----vd~~~~~l~~~G~~~~~~~p~~~~~G~~---~~~~DPdGn~i 115 (128)
T 3g12_A 66 PSLQLGFQITD----LEKTVQELVKIPGAMCILDPTDMPDGKK---AIVLDPDGHSI 115 (128)
T ss_dssp CSEEEEEEESC----HHHHHHHHTTSTTCEEEEEEEECC-CEE---EEEECTTCCEE
T ss_pred CceEEEEEeCC----HHHHHHHHHHCCCceeccCceeCCCccE---EEEECCCCCEE
Confidence 45667788888 88999999999999 7764444444543 89999999853
No 74
>1rwu_A Hypothetical UPF0250 protein YBED; mixed alpha-beta fold, structural genomics, protein structure initiative, PSI; NMR {Escherichia coli} SCOP: d.58.54.1
Probab=38.55 E-value=1.5e+02 Score=24.30 Aligned_cols=64 Identities=16% Similarity=0.145 Sum_probs=47.4
Q ss_pred CeEEEEEEecCCCcHHHHHHHHHHhC---CceEEEEEEEecCCeEEEEEEEeeCCCCCCCcHHHHHHHHHHHcc
Q 048063 36 DCTVVKVDSVSKQGLLLEMVQVLTDM---NLTISKSYISSDAGWFMDVFHVKDEHGNKLTDQKVINYIQQAIGT 106 (484)
Q Consensus 36 ~~t~I~V~~~DrpGLfa~ia~vL~~~---glnI~~A~Itt~~g~~~d~F~V~d~~g~~~~~~~~~~~L~~~L~~ 106 (484)
..+.+.|.+++.+++...|..++..+ +..+ ..+-++.+.|..-++.|. +.+.+.+..|-+.|..
T Consensus 35 c~y~~KvIG~a~~~~~~~V~~vv~~~~p~d~~~-~~r~Ss~GkY~Svtv~v~------v~S~eQv~aiY~~L~~ 101 (109)
T 1rwu_A 35 TPFTYKVMGQALPELVDQVVEVVQRHAPGDYTP-TVKPSSKGNYHSVSITIN------ATHIEQVETLYEELGK 101 (109)
T ss_dssp CCEEEEEEEECCTTHHHHHHHHHHHHSSSCCCE-EEEESSCSSEEEEEEEEC------CSSHHHHHHHHHHHSC
T ss_pred CCceEEEEEECcHHHHHHHHHHHHHhCCCCCCc-eecCCCCCeEEEEEEEEE------ECCHHHHHHHHHHHhc
Confidence 45799999999999999999999988 7777 345555677766455543 3345677778777765
No 75
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=34.36 E-value=1.6e+02 Score=30.74 Aligned_cols=135 Identities=15% Similarity=0.123 Sum_probs=76.1
Q ss_pred EEEEEEecCCCcHHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEeeCCCCCCCcHHHHHHHHHHHccCCC-CCCcccc
Q 048063 38 TVVKVDSVSKQGLLLEMVQVLTDMNLTISKSYISSDAGWFMDVFHVKDEHGNKLTDQKVINYIQQAIGTTGE-IPSSAVA 116 (484)
Q Consensus 38 t~I~V~~~DrpGLfa~ia~vL~~~glnI~~A~Itt~~g~~~d~F~V~d~~g~~~~~~~~~~~L~~~L~~~~~-~~~~~~~ 116 (484)
..+.|.-+||||-|.+++.+|. +-||.+-.-...+.....++....-.+. .+..+.|.+.|....- ...+...
T Consensus 339 ~~~~v~~p~~pg~l~~~~~~l~--~~~i~~~~~~~~~~~~~~~~~~~e~~~~----~~~~~~~~~~l~~~g~~~~~~~~~ 412 (514)
T 1tdj_A 339 ALLAVTIPEEKGSFLKFCQLLG--GRSVTEFNYRFADAKNACIFVGVRLSRG----LEERKEILQMLNDGGYSVVDLSDD 412 (514)
T ss_dssp EEEEEECCBSSSCSHHHHHTTS--SSEEEEEEEECCCSSBCEEEEEEECSST----HHHHHHHHHHHTSSSCEEETTSSC
T ss_pred ccccccCCCCCchHHHHHHHhC--CCceEEEEeeccCCCeEEEEEEEEeCCc----HHHHHHHHHHHHhCCCCeEECCCC
Confidence 4677889999999999999987 7999877653322222233333332221 3567778888876420 0000000
Q ss_pred -cccccee-eecCCC--CCCeEEEEEEecCCCchHHHHHHHHHhCCCeEEEEEEEecCC---eeEEEEEE
Q 048063 117 -KTYTNKA-VFGSEY--PSEHTAIEMTGTDRPGLFSEISAALADLHCNIVEAHAWSHND---RLACVAYV 179 (484)
Q Consensus 117 -~~~~~v~-v~~~~~--~~~~t~i~V~~~DrpGLL~~Ia~vL~~~glnI~~A~i~T~~~---~~~dvF~V 179 (484)
..+..+. .+.-.+ -.+-..+.+.-+.|||-|.+.-..|.. +.||.--+-..+|. ++.--|.|
T Consensus 413 ~~~~~h~~~~~g~~~~~~~~e~~~~~~fpe~~gal~~fl~~~~~-~~~i~~~~yr~~g~~~~~~~~~~~~ 481 (514)
T 1tdj_A 413 EMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGT-YWNISLFHYRSHGTDYGRVLAAFEL 481 (514)
T ss_dssp HHHHHTGGGTCCCCCSSCCCCEEEEEECCCCTTHHHHHHHHHCS-CCCCCEEECBCTTTCSSCEEEEEC-
T ss_pred HHHHHHHHHhhCCcCccCCCceEEEEeCCCCCCHHHHHHHhcCC-CceEEEEeecCCCCCcccEEEEEEc
Confidence 0000000 011001 124567788899999999999888874 57776666444543 34444444
No 76
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=29.82 E-value=1.6e+02 Score=23.63 Aligned_cols=49 Identities=16% Similarity=0.051 Sum_probs=36.1
Q ss_pred CeEEEEEEecCCCcHHHHHHHHHHhCCce-EEEEEEEecCCeEEEEEEEeeCCCCCC
Q 048063 36 DCTVVKVDSVSKQGLLLEMVQVLTDMNLT-ISKSYISSDAGWFMDVFHVKDEHGNKL 91 (484)
Q Consensus 36 ~~t~I~V~~~DrpGLfa~ia~vL~~~gln-I~~A~Itt~~g~~~d~F~V~d~~g~~~ 91 (484)
+...+.+.+.| +..+...|.+.|+. |...-.....|.. |++.|++|+.+
T Consensus 66 ~~~~l~f~v~d----vd~~~~~l~~~G~~~~~~~p~~~~~G~~---~~~~DPdGn~i 115 (128)
T 3g12_A 66 PSLQLGFQITD----LEKTVQELVKIPGAMCILDPTDMPDGKK---AIVLDPDGHSI 115 (128)
T ss_dssp CSEEEEEEESC----HHHHHHHHTTSTTCEEEEEEEECC-CEE---EEEECTTCCEE
T ss_pred CceEEEEEeCC----HHHHHHHHHHCCCceeccCceeCCCccE---EEEECCCCCEE
Confidence 45678888888 78888889999999 7754444445543 88999999853
No 77
>1zhv_A Hypothetical protein ATU0741; NESG, ATR8, structural genomics, PSI, protein struc initiative; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.18.8 d.58.18.8
Probab=26.55 E-value=1.7e+02 Score=24.76 Aligned_cols=44 Identities=14% Similarity=0.234 Sum_probs=32.3
Q ss_pred eEEEEEEec---CCCchHHHHHHHHHhCCCeEEEEEEEecCCeeEEEEEEEe
Q 048063 133 HTAIEMTGT---DRPGLFSEISAALADLHCNIVEAHAWSHNDRLACVAYVSD 181 (484)
Q Consensus 133 ~t~i~V~~~---DrpGLL~~Ia~vL~~~glnI~~A~i~T~~~~~~dvF~V~~ 181 (484)
...|+|.+. |-.|+++.+++.|++.|++|.-.. |+. .|-..|..
T Consensus 62 wr~i~v~~~l~~~~vGilA~is~pLA~agIsif~iS--ty~---tD~IlVp~ 108 (134)
T 1zhv_A 62 WSCFKFQGPFAFDETGIVLSVISPLSTNGIGIFVVS--TFD---GDHLLVRS 108 (134)
T ss_dssp EEEEEECSCCCCSSCCHHHHHHHHHHTTTCCCEEEE--CSS---CEEEEEEG
T ss_pred eEEEEEecCCCccHHHHHHHHHHHHHhCCCCeEEEE--ecc---ccEEEEeH
Confidence 445555544 888999999999999999997644 655 56555643
No 78
>1ib8_A Conserved protein SP14.3; nucleic acid binding protein, ribosomal protein, essential gene, structural genomics; NMR {Streptococcus pneumoniae} SCOP: b.38.2.1 d.52.4.1
Probab=23.78 E-value=3.6e+02 Score=23.43 Aligned_cols=92 Identities=15% Similarity=0.176 Sum_probs=57.7
Q ss_pred hHHHHHHHHhhCCceEEEEEEEecCCeEEEEEEEEccCCCCCCChhHHHHHHHHHHHHHhh----ccCCceEEEEEec--
Q 048063 305 LMFDTVCTLTDMQYVVFHASIGCHGDYAFQEYFIRHIDGYALNTEGEKERVIKCLEAAIER----RVCEGVRLELCAA-- 378 (484)
Q Consensus 305 Ll~~i~~~L~~~~l~I~~A~i~t~~g~a~d~f~V~~~~g~~~~~~~~~e~l~~~L~~~l~r----r~~~~t~leV~a~-- 378 (484)
+..-+..++.. |+.+.+..+...++..+-..+|-..+|- +.+..+.+.+.+.+.|.+ ..+..|.|||+++
T Consensus 14 v~~li~p~~~~-g~eLvdve~~~~g~~~~LrV~ID~~~gi---~lddC~~vSr~is~~LD~~~~d~i~~~Y~LEVSSPGl 89 (164)
T 1ib8_A 14 VREVVEPVIEA-PFELVDIEYGKIGSDMILSIFVDKPEGI---TLNDTADLTEMISPVLDTIKPDPFPEQYFLEITSPGL 89 (164)
T ss_dssp HHHHHHHHHCS-SSEEEEEEEEEETTEEEEEEEEECSSCC---CHHHHHHHHHHHGGGTTTCCSCCCCSCEEEEEECCSS
T ss_pred HHHHHHHHHcC-CcEEEEEEEEecCCCcEEEEEEECCCCC---CHHHHHHHHHHHHHHhccccccCCCCCeEEEEeCCCC
Confidence 44445566667 9999999998776533323344444442 345677888888777752 2345899999986
Q ss_pred CCcchHHHHHHHHHhCCceEEEEEeee
Q 048063 379 NRVGLLSDITRVLRENGLAVVRAHVAT 405 (484)
Q Consensus 379 DRpGLL~~It~~f~~~gi~I~~A~i~T 405 (484)
||| |...-++-+-.|-. ++|.+
T Consensus 90 dRp--L~~~~df~r~~G~~---V~V~l 111 (164)
T 1ib8_A 90 ERP--LKTKDAVAGAVGKY---IHVGL 111 (164)
T ss_dssp SSC--CSSHHHHHHHCSEE---EEEEC
T ss_pred CCC--CCCHHHHHHhCCcE---EEEEE
Confidence 565 44455555555643 34555
No 79
>2j0w_A Lysine-sensitive aspartokinase 3; feedback inhibition, allosteric regulation, ACT domain, transferase, amino acid biosynthesis; HET: ADP; 2.5A {Escherichia coli} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 PDB: 2j0x_A*
Probab=22.02 E-value=37 Score=34.98 Aligned_cols=119 Identities=10% Similarity=0.064 Sum_probs=73.0
Q ss_pred CceeEEEEEe---CCCCchHHHHHHHHhhCCceEEEEEEEecCCeEEEEEEEEccCCCCCCChhHHHHHHHHHHHHHhh-
Q 048063 290 KGYSIVSVDC---KDRPRLMFDTVCTLTDMQYVVFHASIGCHGDYAFQEYFIRHIDGYALNTEGEKERVIKCLEAAIER- 365 (484)
Q Consensus 290 ~~~t~V~V~~---~DrpgLl~~i~~~L~~~~l~I~~A~i~t~~g~a~d~f~V~~~~g~~~~~~~~~e~l~~~L~~~l~r- 365 (484)
.+.+.|.|.+ .+.+|..+++..+|.+.+++|..-. +.. .--+|.|...+...-.....++++.+.|.. +..
T Consensus 306 ~~~~~i~i~~~~m~~~~g~~~~if~~l~~~~i~vd~i~--ss~--~sis~~v~~~~~~~~~~~~~~~~~~~el~~-~~~v 380 (449)
T 2j0w_A 306 RNQTLLTLHSLNMLHSRGFLAEVFGILARHNISVDLIT--TSE--VSVALTLDTTGSTSTGDTLLTQSLLMELSA-LCRV 380 (449)
T ss_dssp EEEEEEEECCCSCSCHHHHHHHHTTTTTTTTCCCSEEE--EET--TEEEEEECCCCCSSTTCCSSCHHHHHHHHH-HSCE
T ss_pred CCEEEEEEEecCCCCccCHHHHHHHHHHHcCCCEEEEE--eCC--CeEEEEEeccccchhhHHHHHHHHHHHhcc-CCeE
Confidence 3567788876 4678999999999999999987644 222 112355544332111011244556555554 111
Q ss_pred -ccCCceEEEEEec---CCcchHHHHHHHHHhCCceEEEEEeeecCCee-eeEEEEEc
Q 048063 366 -RVCEGVRLELCAA---NRVGLLSDITRVLRENGLAVVRAHVATKGEKS-VNAFYLRD 418 (484)
Q Consensus 366 -r~~~~t~leV~a~---DRpGLL~~It~~f~~~gi~I~~A~i~T~g~~a-~d~F~v~~ 418 (484)
-.+....|.|.+. ..||+.+.+..+|.+ |||.... +|... .=.|.|..
T Consensus 381 ~~~~~~a~vsvVG~gm~~~~gv~~~~f~aL~~--ini~mIs---qg~Se~~Is~vV~~ 433 (449)
T 2j0w_A 381 EVEEGLALVALIGNDLSKACGVGKEVFGVLEP--FNIRMIC---YGASSHNLCFLVPG 433 (449)
T ss_dssp EEEEEEEEEEEEESSCTTSSSHHHHHHSSCTT--SCCCEEE---ESSCTTEEEEEEEG
T ss_pred EEeCCeEEEEEECCCccccccHHHHHHHHHhC--CCeEEEE---ecCCCcEEEEEEeH
Confidence 1122577888887 589999999999966 7776553 45443 33466643
Done!