Your job contains 1 sequence.
>048066
GWADVEIPCFYNPLTTALQPRDKTWQGMKTVAELRREHNFSIPVNKDSLYKPIERRPRKF
NPLVIPKSLHWL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 048066
(72 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2033050 - symbol:AT1G06720 species:3702 "Arabi... 277 7.6e-23 1
RGD|1308043 - symbol:Bms1 "BMS1 homolog, ribosome assembl... 185 7.8e-14 1
UNIPROTKB|F1RG23 - symbol:BMS1 "Uncharacterized protein" ... 185 8.1e-14 1
UNIPROTKB|E1BPP2 - symbol:BMS1 "Uncharacterized protein" ... 190 1.7e-13 1
UNIPROTKB|Q14692 - symbol:BMS1 "Ribosome biogenesis prote... 187 3.5e-13 1
UNIPROTKB|F1PKN2 - symbol:BMS1 "Uncharacterized protein" ... 187 3.5e-13 1
UNIPROTKB|F1NH69 - symbol:BMS1 "Uncharacterized protein" ... 182 1.2e-12 1
CGD|CAL0002359 - symbol:BMS1 species:5476 "Candida albica... 171 1.6e-11 1
UNIPROTKB|Q5A9Y0 - symbol:BMS1 "Putative uncharacterized ... 171 1.6e-11 1
ZFIN|ZDB-GENE-060720-2 - symbol:bms1l "BMS1-like, ribosom... 170 2.1e-11 1
DICTYBASE|DDB_G0287891 - symbol:bms1l "BMS1-like ribosome... 163 1.2e-10 1
FB|FBgn0036686 - symbol:CG7728 species:7227 "Drosophila m... 155 7.9e-10 1
ASPGD|ASPL0000005995 - symbol:AN6334 species:162425 "Emer... 151 2.1e-09 1
WB|WBGene00022021 - symbol:Y61A9LA.10 species:6239 "Caeno... 144 1.0e-08 1
SGD|S000006138 - symbol:BMS1 "GTPase required for ribosom... 139 4.1e-08 1
POMBASE|SPBC31E1.06 - symbol:bms1 "GTP binding protein Bm... 120 4.1e-06 1
>TAIR|locus:2033050 [details] [associations]
symbol:AT1G06720 species:3702 "Arabidopsis thaliana"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0006406 "mRNA
export from nucleus" evidence=RCA] [GO:0006606 "protein import into
nucleus" evidence=RCA] InterPro:IPR000795 InterPro:IPR012948
Pfam:PF00009 Pfam:PF08142 SMART:SM00785 GO:GO:0005525 EMBL:CP002684
GO:GO:0005634 GO:GO:0003924 GO:GO:0006184 GO:GO:0042254 KO:K14569
OMA:ASYGFEM InterPro:IPR007034 Pfam:PF04950 IPI:IPI00521552
RefSeq:NP_172157.1 UniGene:At.12092 ProteinModelPortal:F4IDR3
SMR:F4IDR3 PRIDE:F4IDR3 EnsemblPlants:AT1G06720.1 GeneID:837182
KEGG:ath:AT1G06720 Uniprot:F4IDR3
Length = 1147
Score = 277 (102.6 bits), Expect = 7.6e-23, P = 7.6e-23
Identities = 52/68 (76%), Positives = 55/68 (80%)
Query: 2 WADVEIPCFYNPLTTALQPRDKTWQGMKTVAELRREHNFSIPVNKDSLYKPIERRPRKFN 61
W VE+P FYNPLTTALQPRDKTW GMKT ELRRE N IPVNKDSLYK IER+ +KFN
Sbjct: 977 WTTVEVPQFYNPLTTALQPRDKTWNGMKTFGELRRELNIPIPVNKDSLYKAIERKQKKFN 1036
Query: 62 PLVIPKSL 69
PL IPK L
Sbjct: 1037 PLQIPKRL 1044
>RGD|1308043 [details] [associations]
symbol:Bms1 "BMS1 homolog, ribosome assembly protein (yeast)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] RGD:1308043
InterPro:IPR007034 Pfam:PF04950 IPI:IPI00358418 EMBL:BC092659
UniGene:Rn.41094 STRING:Q561Z9 UCSC:RGD:1308043
Genevestigator:Q561Z9 Uniprot:Q561Z9
Length = 392
Score = 185 (70.2 bits), Expect = 7.8e-14, P = 7.8e-14
Identities = 37/70 (52%), Positives = 47/70 (67%)
Query: 2 WADVEIPCFYNPLTTALQP-RDK-TWQGMKTVAELRREHNFSIPVNKDSLYKPIERRPRK 59
W V IP FYNP+T+ L+P +K TW GM+T +LR H + NKDSLYKPI R+ +
Sbjct: 213 WYPVSIPAFYNPVTSLLKPVGEKDTWSGMRTTHQLRLAHGIKLKPNKDSLYKPILRQKKH 272
Query: 60 FNPLVIPKSL 69
FN L IPK+L
Sbjct: 273 FNSLHIPKAL 282
>UNIPROTKB|F1RG23 [details] [associations]
symbol:BMS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] GO:GO:0005634
InterPro:IPR007034 Pfam:PF04950 GeneTree:ENSGT00550000074774
EMBL:CU407077 Ensembl:ENSSSCT00000011164 OMA:DIAFVRT Uniprot:F1RG23
Length = 399
Score = 185 (70.2 bits), Expect = 8.1e-14, P = 8.1e-14
Identities = 36/70 (51%), Positives = 47/70 (67%)
Query: 2 WADVEIPCFYNPLTTALQP-RDK-TWQGMKTVAELRREHNFSIPVNKDSLYKPIERRPRK 59
W V +P FYNP+T+ L+P +K TW GM+T +LR H + NKDSLYKPI R+ +
Sbjct: 218 WYPVSVPAFYNPVTSLLKPVGEKDTWSGMRTTGQLRLVHGIKLKPNKDSLYKPIIRQKKH 277
Query: 60 FNPLVIPKSL 69
FN L IPK+L
Sbjct: 278 FNSLHIPKAL 287
>UNIPROTKB|E1BPP2 [details] [associations]
symbol:BMS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 OMA:ASYGFEM
InterPro:IPR007034 Pfam:PF04950 GeneTree:ENSGT00550000074774
EMBL:DAAA02061559 EMBL:DAAA02061560 IPI:IPI00838890
Ensembl:ENSBTAT00000048816 Uniprot:E1BPP2
Length = 1290
Score = 190 (71.9 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 37/70 (52%), Positives = 47/70 (67%)
Query: 2 WADVEIPCFYNPLTTALQP-RDK-TWQGMKTVAELRREHNFSIPVNKDSLYKPIERRPRK 59
W V IP FYNP+T+ L+P +K TW GM+T +LR H + NKDSLYKPI R+ +
Sbjct: 1109 WYPVSIPAFYNPVTSLLKPVGEKDTWSGMRTTGQLRLAHGIKLKANKDSLYKPIVRQKKH 1168
Query: 60 FNPLVIPKSL 69
FN L IPK+L
Sbjct: 1169 FNSLHIPKAL 1178
>UNIPROTKB|Q14692 [details] [associations]
symbol:BMS1 "Ribosome biogenesis protein BMS1 homolog"
species:9606 "Homo sapiens" [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISS;IDA] [GO:0042255 "ribosome assembly" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR000795
InterPro:IPR012948 Pfam:PF00009 Pfam:PF08142 SMART:SM00785
GO:GO:0005525 GO:GO:0005524 GO:GO:0005730 GO:GO:0003924
GO:GO:0006184 eggNOG:COG5192 EMBL:D80009 EMBL:AL022344
EMBL:CH471160 EMBL:BC043345 EMBL:BC150252 IPI:IPI00006099
RefSeq:NP_055568.3 UniGene:Hs.10848 ProteinModelPortal:Q14692
SMR:Q14692 IntAct:Q14692 STRING:Q14692 PhosphoSite:Q14692
DMDM:27151474 PaxDb:Q14692 PeptideAtlas:Q14692 PRIDE:Q14692
Ensembl:ENST00000374518 GeneID:9790 KEGG:hsa:9790 UCSC:uc001jaj.3
CTD:9790 GeneCards:GC10P043277 H-InvDB:HIX0059462
H-InvDB:HIX0172328 H-InvDB:HIX0172329 HGNC:HGNC:23505 HPA:HPA036589
MIM:611448 neXtProt:NX_Q14692 PharmGKB:PA162377556
HOGENOM:HOG000166882 HOVERGEN:HBG023890 InParanoid:Q14692 KO:K14569
OMA:ASYGFEM OrthoDB:EOG4KWJS4 PhylomeDB:Q14692 ChiTaRS:BMS1
GenomeRNAi:9790 NextBio:36866 Bgee:Q14692 CleanEx:HS_BMS1
Genevestigator:Q14692 GermOnline:ENSG00000165733 GO:GO:0042255
InterPro:IPR007034 Pfam:PF04950 Uniprot:Q14692
Length = 1282
Score = 187 (70.9 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 37/70 (52%), Positives = 47/70 (67%)
Query: 2 WADVEIPCFYNPLTTALQP-RDK-TWQGMKTVAELRREHNFSIPVNKDSLYKPIERRPRK 59
W V IP FYNP+T+ L+P +K TW GM+T +LR H + NKDSLYKPI R+ +
Sbjct: 1101 WYPVSIPAFYNPVTSLLKPVGEKDTWSGMRTTGQLRLAHGVRLKANKDSLYKPILRQKKH 1160
Query: 60 FNPLVIPKSL 69
FN L IPK+L
Sbjct: 1161 FNSLHIPKAL 1170
>UNIPROTKB|F1PKN2 [details] [associations]
symbol:BMS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 CTD:9790 KO:K14569
OMA:ASYGFEM InterPro:IPR007034 Pfam:PF04950
GeneTree:ENSGT00550000074774 EMBL:AAEX03015389 EMBL:AAEX03015390
RefSeq:XP_534956.2 Ensembl:ENSCAFT00000011417 GeneID:477760
KEGG:cfa:477760 Uniprot:F1PKN2
Length = 1287
Score = 187 (70.9 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 37/70 (52%), Positives = 47/70 (67%)
Query: 2 WADVEIPCFYNPLTTALQP-RDK-TWQGMKTVAELRREHNFSIPVNKDSLYKPIERRPRK 59
W V IP FYNP+T+ L+P +K TW GM+T +LR H + NKDSLYKPI R+ +
Sbjct: 1106 WYPVSIPAFYNPVTSLLKPVGEKDTWSGMRTTGQLRLAHGVKLKPNKDSLYKPIVRQKKH 1165
Query: 60 FNPLVIPKSL 69
FN L IPK+L
Sbjct: 1166 FNSLHIPKAL 1175
>UNIPROTKB|F1NH69 [details] [associations]
symbol:BMS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 OMA:ASYGFEM
InterPro:IPR007034 Pfam:PF04950 GeneTree:ENSGT00550000074774
EMBL:AADN02035303 EMBL:AADN02035304 IPI:IPI00604102
Ensembl:ENSGALT00000004133 Uniprot:F1NH69
Length = 1304
Score = 182 (69.1 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 35/70 (50%), Positives = 46/70 (65%)
Query: 2 WADVEIPCFYNPLTTALQPRDK--TWQGMKTVAELRREHNFSIPVNKDSLYKPIERRPRK 59
W V IP FYNP+T+ L+P + +W+GM+T +LR + + NKDSLYKPI R R
Sbjct: 1121 WYPVSIPKFYNPVTSLLKPAGEKDSWKGMRTTGQLRHDQGIKLKQNKDSLYKPIVREKRH 1180
Query: 60 FNPLVIPKSL 69
FN L IPK+L
Sbjct: 1181 FNKLHIPKAL 1190
>CGD|CAL0002359 [details] [associations]
symbol:BMS1 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0030686 "90S
preribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005819 "spindle" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0034511 "U3 snoRNA binding" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042255 "ribosome assembly" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR012948 Pfam:PF00004 Pfam:PF08142
SMART:SM00382 SMART:SM00785 CGD:CAL0002359 GO:GO:0005524
GO:GO:0005634 GO:GO:0042254 GO:GO:0035690 GO:GO:0017111
eggNOG:COG5192 EMBL:AACQ01000041 EMBL:AACQ01000040 KO:K14569
InterPro:IPR007034 Pfam:PF04950 RefSeq:XP_718522.1
RefSeq:XP_718605.1 ProteinModelPortal:Q5A9Y0 STRING:Q5A9Y0
GeneID:3639801 GeneID:3639857 KEGG:cal:CaO19.10040
KEGG:cal:CaO19.2504 Uniprot:Q5A9Y0
Length = 1210
Score = 171 (65.3 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 29/68 (42%), Positives = 45/68 (66%)
Query: 2 WADVEIPCFYNPLTTALQPRDKTWQGMKTVAELRREHNFSIPVNKDSLYKPIERRPRKFN 61
W V++ FYNP+T+ L + W+GM+ ++R + N + P+N DS YK +ER R+FN
Sbjct: 1032 WYPVKVKKFYNPVTSLLLGQHSEWKGMRLTGQVRADENIATPLNVDSQYKKVERVERRFN 1091
Query: 62 PLVIPKSL 69
PL +PKS+
Sbjct: 1092 PLKVPKSI 1099
>UNIPROTKB|Q5A9Y0 [details] [associations]
symbol:BMS1 "Putative uncharacterized protein BMS1"
species:237561 "Candida albicans SC5314" [GO:0035690 "cellular
response to drug" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR012948 Pfam:PF00004 Pfam:PF08142
SMART:SM00382 SMART:SM00785 CGD:CAL0002359 GO:GO:0005524
GO:GO:0005634 GO:GO:0042254 GO:GO:0035690 GO:GO:0017111
eggNOG:COG5192 EMBL:AACQ01000041 EMBL:AACQ01000040 KO:K14569
InterPro:IPR007034 Pfam:PF04950 RefSeq:XP_718522.1
RefSeq:XP_718605.1 ProteinModelPortal:Q5A9Y0 STRING:Q5A9Y0
GeneID:3639801 GeneID:3639857 KEGG:cal:CaO19.10040
KEGG:cal:CaO19.2504 Uniprot:Q5A9Y0
Length = 1210
Score = 171 (65.3 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 29/68 (42%), Positives = 45/68 (66%)
Query: 2 WADVEIPCFYNPLTTALQPRDKTWQGMKTVAELRREHNFSIPVNKDSLYKPIERRPRKFN 61
W V++ FYNP+T+ L + W+GM+ ++R + N + P+N DS YK +ER R+FN
Sbjct: 1032 WYPVKVKKFYNPVTSLLLGQHSEWKGMRLTGQVRADENIATPLNVDSQYKKVERVERRFN 1091
Query: 62 PLVIPKSL 69
PL +PKS+
Sbjct: 1092 PLKVPKSI 1099
>ZFIN|ZDB-GENE-060720-2 [details] [associations]
symbol:bms1l "BMS1-like, ribosome assembly protein
(yeast)" species:7955 "Danio rerio" [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000795 InterPro:IPR012948 Pfam:PF00009
Pfam:PF08142 SMART:SM00785 ZFIN:ZDB-GENE-060720-2 GO:GO:0005525
GO:GO:0005634 GO:GO:0003924 GO:GO:0006184 GO:GO:0042254 KO:K14569
InterPro:IPR007034 Pfam:PF04950 GeneTree:ENSGT00550000074774
EMBL:BX248124 IPI:IPI00919984 RefSeq:NP_001104620.2
UniGene:Dr.76844 Ensembl:ENSDART00000053761
Ensembl:ENSDART00000130032 GeneID:553241 KEGG:dre:553241 CTD:553241
NextBio:20880021 Uniprot:E7F349
Length = 1221
Score = 170 (64.9 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 33/70 (47%), Positives = 44/70 (62%)
Query: 2 WADVEIPCFYNPLTTALQP--RDKTWQGMKTVAELRREHNFSIPVNKDSLYKPIERRPRK 59
W V +P YNP+T+ L P + TW GM+T+ +L+ + +DSLYKPIER+ R
Sbjct: 1041 WYPVSVPRLYNPVTSLLMPVGQKHTWSGMRTLGQLKHDLGIHNKPKQDSLYKPIERQVRH 1100
Query: 60 FNPLVIPKSL 69
FNPL IPK L
Sbjct: 1101 FNPLRIPKEL 1110
>DICTYBASE|DDB_G0287891 [details] [associations]
symbol:bms1l "BMS1-like ribosome biogenesis protein"
species:44689 "Dictyostelium discoideum" [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0042255 "ribosome assembly" evidence=ISS] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000795 InterPro:IPR012948 Pfam:PF00009 Pfam:PF08142
SMART:SM00785 dictyBase:DDB_G0287891 GO:GO:0005525 GO:GO:0005739
GO:GO:0005730 GO:GO:0003924 GO:GO:0006184 GenomeReviews:CM000154_GR
EMBL:AAFI02000104 eggNOG:COG5192 GO:GO:0006364 KO:K14569
OMA:ASYGFEM GO:GO:0042255 InterPro:IPR007034 Pfam:PF04950
RefSeq:XP_637074.1 ProteinModelPortal:Q54JS8 STRING:Q54JS8
EnsemblProtists:DDB0234115 GeneID:8626329 KEGG:ddi:DDB_G0287891
InParanoid:Q54JS8 ProtClustDB:CLSZ2846661 Uniprot:Q54JS8
Length = 1205
Score = 163 (62.4 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 34/69 (49%), Positives = 43/69 (62%)
Query: 2 WADVEIPCFYNPLTTALQPRDKTWQGMKTVAELRREHNFSIPVNKDSLYK-PIERRPRKF 60
W + FYNP+T+ LQ + W+GMKTV +LR E+N S PV KDS Y+ IER +KF
Sbjct: 1032 WYTITPTRFYNPVTSLLQEKKTHWEGMKTVGQLRFENNLSAPVKKDSSYQGKIERDEKKF 1091
Query: 61 NPLVIPKSL 69
L IP L
Sbjct: 1092 KELRIPNKL 1100
>FB|FBgn0036686 [details] [associations]
symbol:CG7728 species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR012948 Pfam:PF08142 SMART:SM00785 GO:GO:0005634
EMBL:AE014296 GO:GO:0022008 GO:GO:0042254 eggNOG:COG5192 KO:K14569
OMA:ASYGFEM InterPro:IPR007034 Pfam:PF04950
GeneTree:ENSGT00550000074774 EMBL:AY061447 RefSeq:NP_648945.1
UniGene:Dm.3597 SMR:Q9VVC9 STRING:Q9VVC9 EnsemblMetazoa:FBtr0075274
GeneID:39904 KEGG:dme:Dmel_CG7728 UCSC:CG7728-RA
FlyBase:FBgn0036686 InParanoid:Q9VVC9 OrthoDB:EOG4ZGMT9
GenomeRNAi:39904 NextBio:816019 Uniprot:Q9VVC9
Length = 1159
Score = 155 (59.6 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 31/70 (44%), Positives = 43/70 (61%)
Query: 2 WADVEIPCFYNPLTTALQPRDKT--WQGMKTVAELRREHNFSIPVNKDSLYKPIERRPRK 59
W VE+P FY P+++ L P D+ WQGMKT+ +L+RE DS+Y I R+ +
Sbjct: 991 WFRVEVPRFYAPVSSLLLPLDQKSQWQGMKTLGQLKRERAVQNAAQPDSMYTTIVRKEKI 1050
Query: 60 FNPLVIPKSL 69
F PL IPK+L
Sbjct: 1051 FRPLTIPKAL 1060
>ASPGD|ASPL0000005995 [details] [associations]
symbol:AN6334 species:162425 "Emericella nidulans"
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005819 "spindle" evidence=IEA] InterPro:IPR000795
InterPro:IPR012948 Pfam:PF00009 Pfam:PF08142 SMART:SM00785
GO:GO:0005525 GO:GO:0005739 GO:GO:0005634 GO:GO:0003924
GO:GO:0006184 GO:GO:0042254 EMBL:AACD01000107 EMBL:BN001301
eggNOG:COG5192 GO:GO:0030686 HOGENOM:HOG000166882 KO:K14569
OMA:ASYGFEM InterPro:IPR007034 Pfam:PF04950 OrthoDB:EOG4GTPN1
GO:GO:0034511 RefSeq:XP_663938.1 ProteinModelPortal:Q5AZE6
STRING:Q5AZE6 EnsemblFungi:CADANIAT00006652 GeneID:2871229
KEGG:ani:AN6334.2 Uniprot:Q5AZE6
Length = 1179
Score = 151 (58.2 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 31/73 (42%), Positives = 41/73 (56%)
Query: 2 WADVEIPCFYNPLTTALQPR-----DKTWQGMKTVAELRREHNFSIPVNKDSLYKPIERR 56
W ++ FYNP+T L D W+GM+ E+RRE P+NKDS Y+ IER
Sbjct: 998 WYPIKPHRFYNPVTNLLDIEEGLSGDGGWKGMRLTGEVRREQGIPTPLNKDSAYRKIERP 1057
Query: 57 PRKFNPLVIPKSL 69
R FNPL +P+ L
Sbjct: 1058 ERHFNPLRVPRQL 1070
>WB|WBGene00022021 [details] [associations]
symbol:Y61A9LA.10 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] InterPro:IPR000795 InterPro:IPR012948 Pfam:PF00009
Pfam:PF08142 SMART:SM00785 GO:GO:0005525 GO:GO:0005634
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0016246 GO:GO:0003924 GO:GO:0006184 GO:GO:0042254
eggNOG:COG5192 HOGENOM:HOG000166882 KO:K14569 OMA:ASYGFEM
InterPro:IPR007034 Pfam:PF04950 GeneTree:ENSGT00550000074774
EMBL:FO081464 RefSeq:NP_504245.3 ProteinModelPortal:Q9N306
SMR:Q9N306 STRING:Q9N306 PaxDb:Q9N306 EnsemblMetazoa:Y61A9LA.10
GeneID:178851 KEGG:cel:CELE_Y61A9LA.10 UCSC:Y61A9LA.10 CTD:178851
WormBase:Y61A9LA.10 InParanoid:Q9N306 NextBio:902832 Uniprot:Q9N306
Length = 1055
Score = 144 (55.7 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 29/68 (42%), Positives = 38/68 (55%)
Query: 2 WADVEIPCFYNPLTTALQPRDKTWQGMKTVAELRREHNFSIPVNKDSLYKPIERRPRKFN 61
W V IP FY P++ LQ W GM+TV ++R E P NKDS YKPI R+ +
Sbjct: 875 WVTVPIPRFYTPISDHLQASAAAWIGMRTVGKMRSELGMGTPQNKDSDYKPIVRKEFESA 934
Query: 62 PLVIPKSL 69
P+ +P L
Sbjct: 935 PIHLPPKL 942
>SGD|S000006138 [details] [associations]
symbol:BMS1 "GTPase required for ribosomal subunit synthesis
and rRNA processing" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0034511 "U3 snoRNA binding" evidence=IDA] [GO:0042255 "ribosome
assembly" evidence=IDA] [GO:0005525 "GTP binding"
evidence=IEA;IDA;IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IEA;IDA;IMP] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0030686 "90S preribosome" evidence=IDA]
InterPro:IPR000795 InterPro:IPR012948 Pfam:PF00009 Pfam:PF08142
SMART:SM00785 SGD:S000006138 GO:GO:0005525 GO:GO:0005739
GO:GO:0005524 GO:GO:0005730 GO:GO:0003924 EMBL:BK006949
eggNOG:COG5192 GO:GO:0030686 GO:GO:0006364 HOGENOM:HOG000166882
KO:K14569 OMA:ASYGFEM GO:GO:0042255 InterPro:IPR007034 Pfam:PF04950
OrthoDB:EOG4GTPN1 EMBL:Z73573 PIR:S65236 RefSeq:NP_015107.1
ProteinModelPortal:Q08965 SMR:Q08965 DIP:DIP-6562N IntAct:Q08965
MINT:MINT-647500 STRING:Q08965 PaxDb:Q08965 PeptideAtlas:Q08965
PRIDE:Q08965 EnsemblFungi:YPL217C GeneID:855884 KEGG:sce:YPL217C
CYGD:YPL217c GeneTree:ENSGT00550000074774 NextBio:980544
Genevestigator:Q08965 GermOnline:YPL217C GO:GO:0034511
Uniprot:Q08965
Length = 1183
Score = 139 (54.0 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 26/68 (38%), Positives = 37/68 (54%)
Query: 2 WADVEIPCFYNPLTTALQPRDKTWQGMKTVAELRREHNFSIPVNKDSLYKPIERRPRKFN 61
W V + FYNP+T+ L W+G++ ++R N P N DS Y IER R FN
Sbjct: 1006 WYPVRVKKFYNPVTSLLLKEKTEWKGLRLTGQIRAAMNLETPSNPDSAYHKIERVERHFN 1065
Query: 62 PLVIPKSL 69
L +PK++
Sbjct: 1066 GLKVPKAV 1073
>POMBASE|SPBC31E1.06 [details] [associations]
symbol:bms1 "GTP binding protein Bms1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS;IDA] [GO:0005730 "nucleolus" evidence=ISS;IDA]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0005819 "spindle" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0042255 "ribosome assembly"
evidence=ISS] InterPro:IPR000795 InterPro:IPR012948 Pfam:PF00009
Pfam:PF08142 SMART:SM00785 PomBase:SPBC31E1.06 GO:GO:0005525
GO:GO:0005739 GO:GO:0005524 GO:GO:0005730 GO:GO:0005819
EMBL:CU329671 GO:GO:0003924 GO:GO:0006184 eggNOG:COG5192
GO:GO:0006364 HOGENOM:HOG000166882 KO:K14569 OMA:ASYGFEM
GO:GO:0042255 InterPro:IPR007034 Pfam:PF04950 RefSeq:NP_595102.2
ProteinModelPortal:O94653 STRING:O94653 EnsemblFungi:SPBC31E1.06.1
GeneID:2540390 KEGG:spo:SPBC31E1.06 OrthoDB:EOG4GTPN1
NextBio:20801517 Uniprot:O94653
Length = 1121
Score = 120 (47.3 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 27/69 (39%), Positives = 37/69 (53%)
Query: 2 WADVEIPCFYNPLTTALQPRDKT-WQGMKTVAELRREHNFSIPVNKDSLYKPIERRPRKF 60
W V++ F +T L+ DKT W GM+ E+R E P+ +S Y+ I R R F
Sbjct: 944 WYPVQVRKFCTMVTNLLET-DKTEWNGMRLTGEVRHELGLKTPLRPNSQYQEIVRPSRHF 1002
Query: 61 NPLVIPKSL 69
NPL +P SL
Sbjct: 1003 NPLKVPASL 1011
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.138 0.462 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 72 72 0.00091 102 3 11 22 0.36 29
29 0.43 29
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 563 (60 KB)
Total size of DFA: 115 KB (2076 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 8.57u 0.09s 8.66t Elapsed: 00:00:01
Total cpu time: 8.57u 0.09s 8.66t Elapsed: 00:00:01
Start: Fri May 10 07:50:44 2013 End: Fri May 10 07:50:45 2013