BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048067
(75 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|147784232|emb|CAN63891.1| hypothetical protein VITISV_012657 [Vitis vinifera]
Length = 480
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 61/87 (70%), Gaps = 12/87 (13%)
Query: 1 MGNMLIDF---PMKLLMPSSFENIKEIAFKTMHAASK---------LYGLEIEKVRTLNK 48
+G +I+F P+KLLMPSSF NIKEIA KT+ +ASK LYG E+EKVRTLN
Sbjct: 314 LGRRVINFTNLPIKLLMPSSFTNIKEIALKTVPSASKIEIKRVLESLYGFEVEKVRTLNM 373
Query: 49 QGMKKRREGCLVTGPNYKKAYRTLKKP 75
+G KK+R G L+ P+YKKAY TLK P
Sbjct: 374 EGKKKKRGGLLIAKPDYKKAYITLKNP 400
>gi|359497264|ref|XP_002270942.2| PREDICTED: uncharacterized protein LOC100245960 [Vitis vinifera]
gi|296084744|emb|CBI25888.3| unnamed protein product [Vitis vinifera]
Length = 170
Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 61/87 (70%), Gaps = 12/87 (13%)
Query: 1 MGNMLIDF---PMKLLMPSSFENIKEIAFKTMHAASK---------LYGLEIEKVRTLNK 48
+G +I+F P+KLLMPSSF NIKEIA KT+ +ASK LYG E+EKVRTLN
Sbjct: 5 LGRRVINFTNLPIKLLMPSSFTNIKEIALKTVPSASKIEIKRVLESLYGFEVEKVRTLNM 64
Query: 49 QGMKKRREGCLVTGPNYKKAYRTLKKP 75
+G KK+R G L+ P+YKKAY TLK P
Sbjct: 65 EGKKKKRGGLLIAKPDYKKAYITLKNP 91
>gi|294461841|gb|ADE76478.1| unknown [Picea sitchensis]
Length = 164
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 61/87 (70%), Gaps = 12/87 (13%)
Query: 1 MGNMLIDF---PMKLLMPSSFENIKEIAFKTMHAASK---------LYGLEIEKVRTLNK 48
+G ++ F P+KL+MPSS ENIKE+AFKT+ +ASK LYGLE+EKV+TLN
Sbjct: 5 LGRRVVHFANLPLKLVMPSSRENIKEVAFKTVPSASKIEIKRVLESLYGLEVEKVQTLNM 64
Query: 49 QGMKKRREGCLVTGPNYKKAYRTLKKP 75
QG KKRR G + P+YKKAY TLK P
Sbjct: 65 QGKKKRRGGIVYAKPDYKKAYVTLKHP 91
>gi|77999307|gb|ABB17000.1| ribosomal protein L23 family protein [Solanum tuberosum]
Length = 188
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 59/87 (67%), Gaps = 12/87 (13%)
Query: 1 MGNMLIDF---PMKLLMPSSFENIKEIAFKTMHAASK---------LYGLEIEKVRTLNK 48
+G +++F P+KLLMPSSF NI EI+ KT+ +ASK LYG E+EKV+TLN
Sbjct: 5 LGRRVVNFANLPIKLLMPSSFSNITEISLKTIPSASKIEIKRVLESLYGFEVEKVQTLNM 64
Query: 49 QGMKKRREGCLVTGPNYKKAYRTLKKP 75
G KK+R G L+ P+YKKAY TL+ P
Sbjct: 65 DGKKKKRGGLLIAKPDYKKAYVTLRNP 91
>gi|356567706|ref|XP_003552058.1| PREDICTED: uncharacterized protein LOC100800404 [Glycine max]
Length = 176
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 59/87 (67%), Gaps = 12/87 (13%)
Query: 1 MGNMLIDF---PMKLLMPSSFENIKEIAFKTMHAASK---------LYGLEIEKVRTLNK 48
+G ++ F P+KLLMP+SF NI EIA KT+ +A+K LYG +++KVRTLN
Sbjct: 5 LGRRVVQFANLPIKLLMPNSFTNIHEIALKTIPSATKIEIKRVLQSLYGFDVDKVRTLNM 64
Query: 49 QGMKKRREGCLVTGPNYKKAYRTLKKP 75
+G KK+R G L+ P+YKKAY TLK P
Sbjct: 65 EGKKKKRGGLLIAKPDYKKAYVTLKTP 91
>gi|449438835|ref|XP_004137193.1| PREDICTED: 50S ribosomal protein L23-like [Cucumis sativus]
gi|449483270|ref|XP_004156540.1| PREDICTED: 50S ribosomal protein L23-like isoform 1 [Cucumis
sativus]
gi|449483272|ref|XP_004156541.1| PREDICTED: 50S ribosomal protein L23-like isoform 2 [Cucumis
sativus]
Length = 174
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 59/87 (67%), Gaps = 12/87 (13%)
Query: 1 MGNMLIDF---PMKLLMPSSFENIKEIAFKTMHAASK---------LYGLEIEKVRTLNK 48
+G ++ F P+KLLMP+SF NI EIA KT+ +ASK LYG E++KV+TLN
Sbjct: 5 LGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVQTLNM 64
Query: 49 QGMKKRREGCLVTGPNYKKAYRTLKKP 75
+G KK+R G L+ P+YKKAY TL+ P
Sbjct: 65 EGKKKKRGGILIAKPDYKKAYVTLRNP 91
>gi|224083685|ref|XP_002307085.1| predicted protein [Populus trichocarpa]
gi|222856534|gb|EEE94081.1| predicted protein [Populus trichocarpa]
Length = 177
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 59/87 (67%), Gaps = 12/87 (13%)
Query: 1 MGNMLIDF---PMKLLMPSSFENIKEIAFKTMHAASK---------LYGLEIEKVRTLNK 48
+G +I+F P+KLLMP+++ NI EIA KT+ +ASK LYG ++EKV TLN
Sbjct: 5 LGRRVINFANLPIKLLMPTTYTNISEIALKTIPSASKIEIKRVLESLYGFDVEKVSTLNM 64
Query: 49 QGMKKRREGCLVTGPNYKKAYRTLKKP 75
+G KK+R G L+ P+YKKAY TLK P
Sbjct: 65 EGKKKKRGGFLIAKPDYKKAYVTLKTP 91
>gi|255580880|ref|XP_002531259.1| RNA binding protein, putative [Ricinus communis]
gi|223529144|gb|EEF31123.1| RNA binding protein, putative [Ricinus communis]
Length = 174
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 57/87 (65%), Gaps = 12/87 (13%)
Query: 1 MGNMLIDF---PMKLLMPSSFENIKEIAFKTMHAASK---------LYGLEIEKVRTLNK 48
+G ++ F P+KLLMP +F NI+E A KT+ +ASK LYG E++KVRTLN
Sbjct: 5 VGGRVVHFANLPIKLLMPKTFNNIEEFALKTIPSASKIEIKRVLESLYGFEVDKVRTLNM 64
Query: 49 QGMKKRREGCLVTGPNYKKAYRTLKKP 75
+G KK+R G L P+YKKAY TLK P
Sbjct: 65 EGKKKKRGGFLAAKPDYKKAYITLKNP 91
>gi|356511093|ref|XP_003524264.1| PREDICTED: 50S ribosomal protein L23-like [Glycine max]
Length = 111
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 54/81 (66%), Gaps = 10/81 (12%)
Query: 5 LIDFPMKLLMPSSFEN-IKEIAFKTMHAASKL---------YGLEIEKVRTLNKQGMKKR 54
+ + PM LMPS+ N IKEIAFKT +ASK+ YG E+EKVRTLN +G KKR
Sbjct: 4 ITNLPMTPLMPSTSSNDIKEIAFKTAPSASKVEIKRFLETFYGFEVEKVRTLNMKGKKKR 63
Query: 55 REGCLVTGPNYKKAYRTLKKP 75
G LV P+YKKAY TLKKP
Sbjct: 64 YAGSLVAKPDYKKAYVTLKKP 84
>gi|356528473|ref|XP_003532827.1| PREDICTED: 50S ribosomal protein L23-like [Glycine max]
Length = 113
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 54/82 (65%), Gaps = 11/82 (13%)
Query: 5 LIDFPMKLLMPSSFE--NIKEIAFKTMHAASKL---------YGLEIEKVRTLNKQGMKK 53
+ + PM LMP+S NIKEIAFKT +ASK+ YG E+EKVRTLN +G KK
Sbjct: 4 ITNLPMTPLMPASTSSNNIKEIAFKTAPSASKVEIKRFLETFYGFEVEKVRTLNMKGKKK 63
Query: 54 RREGCLVTGPNYKKAYRTLKKP 75
R G LV P+YKKAY TLKKP
Sbjct: 64 RYAGSLVAKPDYKKAYVTLKKP 85
>gi|357463337|ref|XP_003601950.1| 50S ribosomal protein L23 [Medicago truncatula]
gi|355490998|gb|AES72201.1| 50S ribosomal protein L23 [Medicago truncatula]
Length = 258
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 54/78 (69%), Gaps = 9/78 (11%)
Query: 7 DFPMKLLMPSSFENIKEIAFKTMHAASK---------LYGLEIEKVRTLNKQGMKKRREG 57
+ P+KLL+P++F +I EIA KT+ +ASK LYG ++EKVRTLN G KK+R G
Sbjct: 14 NLPIKLLLPTNFTDIHEIALKTIPSASKIEIKRVLESLYGFDVEKVRTLNMDGKKKKRGG 73
Query: 58 CLVTGPNYKKAYRTLKKP 75
++ P+YKKA+ TLK P
Sbjct: 74 IVIAKPDYKKAFVTLKTP 91
>gi|217075578|gb|ACJ86149.1| unknown [Medicago truncatula]
Length = 208
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 54/80 (67%), Gaps = 9/80 (11%)
Query: 5 LIDFPMKLLMPSSFENIKEIAFKTMHAASK---------LYGLEIEKVRTLNKQGMKKRR 55
+ P+KLL+P++F +I EIA KT+ +ASK LYG ++EKVRTLN G KK+R
Sbjct: 12 FANLPIKLLLPTNFTDIHEIALKTIPSASKIEIKRVLESLYGFDVEKVRTLNMDGKKKKR 71
Query: 56 EGCLVTGPNYKKAYRTLKKP 75
G ++ P+YKKA+ TLK P
Sbjct: 72 GGIVIAKPDYKKAFVTLKTP 91
>gi|15236061|ref|NP_195698.1| Ribosomal protein L23/L15e family protein [Arabidopsis thaliana]
gi|4490739|emb|CAB38901.1| putative protein [Arabidopsis thaliana]
gi|7271043|emb|CAB80651.1| putative protein [Arabidopsis thaliana]
gi|20260582|gb|AAM13189.1| putative protein [Arabidopsis thaliana]
gi|30102886|gb|AAP21361.1| At4g39880 [Arabidopsis thaliana]
gi|332661733|gb|AEE87133.1| Ribosomal protein L23/L15e family protein [Arabidopsis thaliana]
Length = 178
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 53/87 (60%), Gaps = 12/87 (13%)
Query: 1 MGNMLIDF---PMKLLMPSSFENIKEIAFKTMHAASK---------LYGLEIEKVRTLNK 48
+G ++ F P+KLLMP+ NI E A KT+ +ASK LYG ++EKV TLN
Sbjct: 5 LGGRVVHFANLPIKLLMPAKLTNIHEFALKTIPSASKIEIKRVLESLYGFDVEKVNTLNM 64
Query: 49 QGMKKRREGCLVTGPNYKKAYRTLKKP 75
G KK+R G L+ +YKKAY TL+ P
Sbjct: 65 DGKKKKRGGLLIAKADYKKAYVTLRSP 91
>gi|297798014|ref|XP_002866891.1| hypothetical protein ARALYDRAFT_490774 [Arabidopsis lyrata subsp.
lyrata]
gi|297312727|gb|EFH43150.1| hypothetical protein ARALYDRAFT_490774 [Arabidopsis lyrata subsp.
lyrata]
Length = 174
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 53/87 (60%), Gaps = 12/87 (13%)
Query: 1 MGNMLIDF---PMKLLMPSSFENIKEIAFKTMHAASK---------LYGLEIEKVRTLNK 48
+G ++ F P+KLLMP+ NI E A KT+ +ASK LYG ++EKV TLN
Sbjct: 5 LGGRVVHFANLPIKLLMPAKLTNIHEFALKTIPSASKIEIKRVLESLYGFDVEKVNTLNM 64
Query: 49 QGMKKRREGCLVTGPNYKKAYRTLKKP 75
G KK+R G L+ +YKKAY TL+ P
Sbjct: 65 DGKKKKRGGLLIAKADYKKAYVTLRTP 91
>gi|21554117|gb|AAM63197.1| unknown [Arabidopsis thaliana]
Length = 178
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 53/87 (60%), Gaps = 12/87 (13%)
Query: 1 MGNMLIDF---PMKLLMPSSFENIKEIAFKTMHAASK---------LYGLEIEKVRTLNK 48
+G ++ F P+KLLMP+ NI E A KT+ +ASK LYG ++EKV TLN
Sbjct: 5 LGGRVVHFANLPIKLLMPAKLTNIHEFALKTIPSASKIEIKRVLESLYGFDVEKVNTLNM 64
Query: 49 QGMKKRREGCLVTGPNYKKAYRTLKKP 75
G KK+R G L+ +YKKAY TL+ P
Sbjct: 65 DGKKKKRGGLLIAKADYKKAYVTLRSP 91
>gi|168028270|ref|XP_001766651.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682083|gb|EDQ68504.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 106
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 46/70 (65%), Gaps = 11/70 (15%)
Query: 17 SFENIKEIAFKTMHAASK---------LYGLEIEKVRTLNKQGMKKRREGCLV--TGPNY 65
S ENI E+AFKT+ +ASK LYGL++ KV TLN +G KKR +G L P+Y
Sbjct: 25 SRENITEVAFKTIPSASKIEIKRVLETLYGLQVAKVNTLNMEGKKKRAKGSLAFYRRPDY 84
Query: 66 KKAYRTLKKP 75
KKAY TLK+P
Sbjct: 85 KKAYVTLKEP 94
>gi|115471723|ref|NP_001059460.1| Os07g0415200 [Oryza sativa Japonica Group]
gi|34394046|dbj|BAC84107.1| unknown protein [Oryza sativa Japonica Group]
gi|113610996|dbj|BAF21374.1| Os07g0415200 [Oryza sativa Japonica Group]
gi|215692393|dbj|BAG87813.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222636895|gb|EEE67027.1| hypothetical protein OsJ_23959 [Oryza sativa Japonica Group]
Length = 229
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 13/88 (14%)
Query: 1 MGNMLIDF---PMKLLMPSS-FENIKEIAFKTMHAASK---------LYGLEIEKVRTLN 47
+G +I F P+KL++P + +++E A KT+ +ASK +YG + +VRTLN
Sbjct: 5 LGRRVIHFANLPLKLMLPPAPLSSVQEFAVKTVPSASKVDIRRCLESMYGFSVAEVRTLN 64
Query: 48 KQGMKKRREGCLVTGPNYKKAYRTLKKP 75
+G K RR L P+YKKAY TL+ P
Sbjct: 65 MEGKKLRRGPFLAAKPDYKKAYVTLRAP 92
>gi|125558071|gb|EAZ03607.1| hypothetical protein OsI_25744 [Oryza sativa Indica Group]
Length = 208
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 13/88 (14%)
Query: 1 MGNMLIDF---PMKLLMPSS-FENIKEIAFKTMHAASK---------LYGLEIEKVRTLN 47
+G +I F P+KL++P + +++E A KT+ +ASK +YG + +VRTLN
Sbjct: 5 LGRRVIHFANLPLKLMLPPAPLSSVQEFAVKTVPSASKVDIRRCLESMYGFSVAEVRTLN 64
Query: 48 KQGMKKRREGCLVTGPNYKKAYRTLKKP 75
+G K RR L P+YKKAY TL+ P
Sbjct: 65 MEGKKLRRGPFLAAKPDYKKAYVTLRAP 92
>gi|242056009|ref|XP_002457150.1| hypothetical protein SORBIDRAFT_03g002160 [Sorghum bicolor]
gi|241929125|gb|EES02270.1| hypothetical protein SORBIDRAFT_03g002160 [Sorghum bicolor]
Length = 226
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 13/88 (14%)
Query: 1 MGNMLIDF---PMKLLMPSS-FENIKEIAFKTMHAASK---------LYGLEIEKVRTLN 47
+G +I F P+KL++P + +++E A +T+ +ASK +YG + +VRTLN
Sbjct: 5 LGRRVIHFANLPLKLMLPPAPLSSVQEFAVRTVPSASKVDIRRCLESMYGFSVAEVRTLN 64
Query: 48 KQGMKKRREGCLVTGPNYKKAYRTLKKP 75
+G K RR L P+YKKAY TL+ P
Sbjct: 65 MEGKKLRRGPFLAAKPDYKKAYVTLRAP 92
>gi|326518742|dbj|BAJ92532.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 227
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 10/81 (12%)
Query: 5 LIDFPMKLLMPSS-FENIKEIAFKTMHAASK---------LYGLEIEKVRTLNKQGMKKR 54
+ P+KL++P S +++E A +T+ +ASK +YG + +VRTLN G K R
Sbjct: 12 FANLPIKLMLPPSPLSSVQEFAVRTVPSASKVDIRRCLESMYGFSVAEVRTLNMDGKKIR 71
Query: 55 REGCLVTGPNYKKAYRTLKKP 75
R L P+YKKAY TL+ P
Sbjct: 72 RGSFLAAKPDYKKAYVTLQAP 92
>gi|326520443|dbj|BAK07480.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 227
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 10/81 (12%)
Query: 5 LIDFPMKLLMPSS-FENIKEIAFKTMHAASK---------LYGLEIEKVRTLNKQGMKKR 54
+ P+KL++P S +++E A +T+ +ASK +YG + +VRTLN G K R
Sbjct: 12 FANLPIKLMLPPSPLSSVQEFAVRTVPSASKVDIRRCLESMYGFSVAEVRTLNMDGKKIR 71
Query: 55 REGCLVTGPNYKKAYRTLKKP 75
R L P+YKKAY TL+ P
Sbjct: 72 RGSFLAAKPDYKKAYVTLQAP 92
>gi|357111997|ref|XP_003557796.1| PREDICTED: uncharacterized protein LOC100826794 [Brachypodium
distachyon]
Length = 230
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 10/81 (12%)
Query: 5 LIDFPMKLLMPSS-FENIKEIAFKTMHAASK---------LYGLEIEKVRTLNKQGMKKR 54
+ P+KL++P + +++E A KT+ +ASK +YG I +VRTLN +G K R
Sbjct: 12 FANLPIKLMLPPAPLSSVQEFAVKTIPSASKVDIRRCLESMYGFSIAEVRTLNMEGKKLR 71
Query: 55 REGCLVTGPNYKKAYRTLKKP 75
R L P+YKKAY TL+ P
Sbjct: 72 RGPFLAAKPDYKKAYVTLRAP 92
>gi|219887541|gb|ACL54145.1| unknown [Zea mays]
gi|414875761|tpg|DAA52892.1| TPA: RNA binding protein [Zea mays]
Length = 226
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 52/88 (59%), Gaps = 13/88 (14%)
Query: 1 MGNMLIDF---PMKLLMPSS-FENIKEIAFKTMHAASK---------LYGLEIEKVRTLN 47
+G +I F P+K+++P + +++E A +T+ +ASK +YG + +VRTLN
Sbjct: 5 LGRRVIHFANLPLKVMLPPAPLSSVQEFAVRTVPSASKVDIRRCLESMYGFSVAEVRTLN 64
Query: 48 KQGMKKRREGCLVTGPNYKKAYRTLKKP 75
+G K RR L P+YKKAY TL+ P
Sbjct: 65 MEGKKLRRGPFLSAKPDYKKAYVTLRAP 92
>gi|226506760|ref|NP_001148914.1| LOC100282534 [Zea mays]
gi|195623246|gb|ACG33453.1| RNA binding protein [Zea mays]
Length = 226
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 52/88 (59%), Gaps = 13/88 (14%)
Query: 1 MGNMLIDF---PMKLLMPSS-FENIKEIAFKTMHAASK---------LYGLEIEKVRTLN 47
+G +I F P+K+++P + +++E A +T+ +ASK +YG + +VRTLN
Sbjct: 5 LGRRVIHFANLPLKVMLPPAPLSSVQEFAVRTVPSASKVDIRRCLESMYGFSVAEVRTLN 64
Query: 48 KQGMKKRREGCLVTGPNYKKAYRTLKKP 75
+G K RR L P+YKKAY TL+ P
Sbjct: 65 MEGKKLRRGPFLSAKPDYKKAYVTLRAP 92
>gi|302781440|ref|XP_002972494.1| hypothetical protein SELMODRAFT_27386 [Selaginella
moellendorffii]
gi|300159961|gb|EFJ26580.1| hypothetical protein SELMODRAFT_27386 [Selaginella
moellendorffii]
Length = 99
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 11/82 (13%)
Query: 5 LIDFPMKLLMPSSFENIKEIAFKTMHAASKL---------YGLEIEKVRTLNKQGMKK-- 53
L + P++L +P ++KE+ F+T A KL YGL++EKV T+N KK
Sbjct: 5 LANIPLRLQLPPRPNDLKELCFRTYPRAGKLEIKRVLQLVYGLDVEKVHTMNMDAKKKFN 64
Query: 54 RREGCLVTGPNYKKAYRTLKKP 75
R+ +YKK Y LK+P
Sbjct: 65 PRKKYFYRTASYKKCYVYLKRP 86
>gi|384248811|gb|EIE22294.1| hypothetical protein COCSUDRAFT_55988 [Coccomyxa subellipsoidea
C-169]
Length = 59
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 34 KLYGLEIEKVRTLNKQGMKKRREGCLVTGPNYKKAYRTLKKP 75
++YGL++ ++T+N +G KKRR+ P YKKAY TLK P
Sbjct: 11 RVYGLKVAAIQTVNYEGKKKRRKTGYFLRPGYKKAYVTLKPP 52
>gi|255073037|ref|XP_002500193.1| ribosomal protein L23 [Micromonas sp. RCC299]
gi|226515455|gb|ACO61451.1| ribosomal protein L23 [Micromonas sp. RCC299]
Length = 160
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 17/84 (20%)
Query: 8 FP---MKLLMPSSFENIKEIA-----FKTMHAASKL---------YGLEIEKVRTLNKQG 50
FP ++L+ P++ N E+ F T A +K+ YG+ +E+V T+N +G
Sbjct: 25 FPNIDLRLVPPNAEANAHEVGMDVVTFITRPAVTKVDVKECLEKVYGVGVERVHTVNYEG 84
Query: 51 MKKRREGCLVTGPNYKKAYRTLKK 74
KKRR P+YKK Y L++
Sbjct: 85 KKKRRGNYFYHRPDYKKVYVQLRE 108
>gi|357443941|ref|XP_003592248.1| hypothetical protein MTR_1g100720 [Medicago truncatula]
gi|357462127|ref|XP_003601345.1| hypothetical protein MTR_3g079680 [Medicago truncatula]
gi|355481296|gb|AES62499.1| hypothetical protein MTR_1g100720 [Medicago truncatula]
gi|355490393|gb|AES71596.1| hypothetical protein MTR_3g079680 [Medicago truncatula]
Length = 151
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Query: 9 PMKLLMP-SSFENIKEIAFKTMHAASKLYGLEIEKVRTLNKQGMKKRREGCLVTGPNYKK 67
P+ P S+F +I EIA KT+ +ASK IE R L ++R G ++ P+YKK
Sbjct: 27 PINQASPASTFTDIHEIALKTIPSASK-----IEIKRVLESLYGFEKRGGIVIAKPDYKK 81
Query: 68 AYRTLKKP 75
A+ T K P
Sbjct: 82 AFVTQKTP 89
>gi|256821664|ref|YP_003145627.1| 50S ribosomal protein L25 [Kangiella koreensis DSM 16069]
gi|256795203|gb|ACV25859.1| Ribosomal protein L25/L23 [Kangiella koreensis DSM 16069]
Length = 98
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 4/45 (8%)
Query: 31 AASKLYGLEIEKVRTLNKQGMKKRREGCLVTG--PNYKKAYRTLK 73
A L+ +E+E VRTLN +G KR+ LV G PN+KKAY +LK
Sbjct: 45 AVETLFEVEVESVRTLNMKG--KRKRFGLVEGRRPNWKKAYVSLK 87
>gi|384228491|ref|YP_005620226.1| 50S ribosomal protein L23 [Buchnera aphidicola str. Ua (Uroleucon
ambrosiae)]
gi|345539424|gb|AEO08291.1| 50S ribosomal protein L23 [Buchnera aphidicola str. Ua (Uroleucon
ambrosiae)]
Length = 100
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 31 AASKLYGLEIEKVRTLNKQGMKKRREGCLVTGPNYKKAYRTLKK 74
A K++ +E++ +RTL +G KKR+ ++ N+KKAY +KK
Sbjct: 46 AIKKIFNVEVDSIRTLKIKGKKKRQSNRIIQRSNWKKAYIKIKK 89
>gi|145300933|ref|YP_001143774.1| 50S ribosomal protein L23 [Aeromonas salmonicida subsp.
salmonicida A449]
gi|418362607|ref|ZP_12963234.1| 50S ribosomal protein L23 [Aeromonas salmonicida subsp.
salmonicida 01-B526]
gi|166986980|sp|A4ST04.1|RL23_AERS4 RecName: Full=50S ribosomal protein L23
gi|142853705|gb|ABO92026.1| ribosomal protein L23 [Aeromonas salmonicida subsp. salmonicida
A449]
gi|356686188|gb|EHI50798.1| 50S ribosomal protein L23 [Aeromonas salmonicida subsp.
salmonicida 01-B526]
Length = 100
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 31 AASKLYGLEIEKVRTLNKQGMKKRREGCLVTGPNYKKAYRTLK 73
A +KL+ +E+E VRTLN +G KR + ++KKAY TLK
Sbjct: 46 AVAKLFEVEVETVRTLNMKGKTKRSGARVGRRSDWKKAYVTLK 88
>gi|421498518|ref|ZP_15945620.1| 50S ribosomal protein L23 [Aeromonas media WS]
gi|407182492|gb|EKE56447.1| 50S ribosomal protein L23 [Aeromonas media WS]
Length = 100
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 31 AASKLYGLEIEKVRTLNKQGMKKRREGCLVTGPNYKKAYRTLK 73
A +KL+ +E+E VRTLN +G KR + ++KKAY TLK
Sbjct: 46 AVAKLFEVEVETVRTLNMKGKTKRSGARVGRRSDWKKAYVTLK 88
>gi|117618338|ref|YP_854841.1| 50S ribosomal protein L23 [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|330827885|ref|YP_004390837.1| 50S ribosomal protein L23 [Aeromonas veronii B565]
gi|334702726|ref|ZP_08518592.1| 50S ribosomal protein L23 [Aeromonas caviae Ae398]
gi|406674859|ref|ZP_11082051.1| 50S ribosomal protein L23 [Aeromonas veronii AMC35]
gi|411011176|ref|ZP_11387505.1| 50S ribosomal protein L23 [Aeromonas aquariorum AAK1]
gi|423199195|ref|ZP_17185778.1| 50S ribosomal protein L23 [Aeromonas hydrophila SSU]
gi|423203669|ref|ZP_17190237.1| 50S ribosomal protein L23 [Aeromonas veronii AER39]
gi|423204894|ref|ZP_17191450.1| 50S ribosomal protein L23 [Aeromonas veronii AMC34]
gi|423211443|ref|ZP_17197976.1| 50S ribosomal protein L23 [Aeromonas veronii AER397]
gi|166986978|sp|A0KF23.1|RL23_AERHH RecName: Full=50S ribosomal protein L23
gi|117559745|gb|ABK36693.1| ribosomal protein L23 [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|328803021|gb|AEB48220.1| 50S ribosomal protein L23 [Aeromonas veronii B565]
gi|404612447|gb|EKB09508.1| 50S ribosomal protein L23 [Aeromonas veronii AER39]
gi|404613523|gb|EKB10544.1| 50S ribosomal protein L23 [Aeromonas veronii AER397]
gi|404625770|gb|EKB22585.1| 50S ribosomal protein L23 [Aeromonas veronii AMC34]
gi|404628367|gb|EKB25149.1| 50S ribosomal protein L23 [Aeromonas veronii AMC35]
gi|404629549|gb|EKB26296.1| 50S ribosomal protein L23 [Aeromonas hydrophila SSU]
Length = 100
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 31 AASKLYGLEIEKVRTLNKQGMKKRREGCLVTGPNYKKAYRTLK 73
A +KL+ +E+E VRTLN +G KR + ++KKAY TLK
Sbjct: 46 AVAKLFEVEVETVRTLNMKGKTKRAGARVGRRSDWKKAYVTLK 88
>gi|400405297|ref|YP_006588156.1| 50S ribosomal protein L23 [secondary endosymbiont of Ctenarytaina
eucalypti]
gi|400363660|gb|AFP84728.1| ribosomal protein L23 [secondary endosymbiont of Ctenarytaina
eucalypti]
Length = 100
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 31 AASKLYGLEIEKVRTLNKQGMKKRREGCLVTGPNYKKAYRTLK 73
A KL+ +E+ VRTL +G KR + + + N+KKAY TLK
Sbjct: 46 AVYKLFSVEVNNVRTLVVKGKTKRHKQHIGSHSNWKKAYVTLK 88
>gi|113968546|ref|YP_732339.1| 50S ribosomal protein L23 [Shewanella sp. MR-4]
gi|114045709|ref|YP_736259.1| 50S ribosomal protein L23 [Shewanella sp. MR-7]
gi|113883230|gb|ABI37282.1| LSU ribosomal protein L23P [Shewanella sp. MR-4]
gi|113887151|gb|ABI41202.1| LSU ribosomal protein L23P [Shewanella sp. MR-7]
Length = 101
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 31 AASKLYGLEIEKVRTLNKQGMKKRREGCLVTGPNYKKAYRTL 72
A +KL+ +E+E VRTL +G KR G + ++KKAY TL
Sbjct: 47 AVAKLFEVEVESVRTLVSKGKTKRTGGRVGRRSDWKKAYVTL 88
>gi|124021019|sp|Q0HNT5.2|RL23_SHESM RecName: Full=50S ribosomal protein L23
gi|124021020|sp|Q0I0A3.2|RL23_SHESR RecName: Full=50S ribosomal protein L23
Length = 100
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 31 AASKLYGLEIEKVRTLNKQGMKKRREGCLVTGPNYKKAYRTL 72
A +KL+ +E+E VRTL +G KR G + ++KKAY TL
Sbjct: 46 AVAKLFEVEVESVRTLVSKGKTKRTGGRVGRRSDWKKAYVTL 87
>gi|339478065|ref|YP_004706885.1| putative 50S ribosomal protein L23 [Candidatus Moranella endobia
PCIT]
gi|338172616|gb|AEI75017.1| putative 50S ribosomal protein L23 [Candidatus Moranella endobia
PCIT]
Length = 112
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 31 AASKLYGLEIEKVRTLNKQGMKKRREGCLVTGPNYKKAYRTLK 73
A +KL+G+E+ VRTL +G KR+ + ++KKAY TLK
Sbjct: 46 AVNKLFGIEVNNVRTLVVKGKTKRQGKLIGCRSDWKKAYITLK 88
>gi|302388714|ref|YP_003824535.1| 50S ribosomal protein L23 [Thermosediminibacter oceani DSM 16646]
gi|302199342|gb|ADL06912.1| LSU ribosomal protein L23P [Thermosediminibacter oceani DSM
16646]
Length = 96
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 30 HAASKLYGLEIEKVRTLNKQGMKKRREGCLVTGPNYKKAYRTLKK 74
+A ++G+++EKV T+N +G KKR P++KKA TLKK
Sbjct: 41 NAVEAIFGVKVEKVNTMNMRGKKKRMGLSEGKRPDWKKAIVTLKK 85
>gi|410632990|ref|ZP_11343637.1| large subunit ribosomal protein L23 [Glaciecola arctica BSs20135]
gi|410147159|dbj|GAC20504.1| large subunit ribosomal protein L23 [Glaciecola arctica BSs20135]
Length = 100
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 31 AASKLYGLEIEKVRTLNKQGMKKRREGCLVTGPNYKKAYRTLKK 74
A KL+ +E++ VRTLN +G KR ++KKAY LK+
Sbjct: 46 AVEKLFEVEVDSVRTLNVKGKTKRHGASFGKRKDWKKAYVVLKE 89
>gi|24371831|ref|NP_715873.1| 50S ribosomal protein L23 RplW [Shewanella oneidensis MR-1]
gi|24345644|gb|AAN53318.1| 50S ribosomal protein L23 RplW [Shewanella oneidensis MR-1]
Length = 101
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 31 AASKLYGLEIEKVRTLNKQGMKKRREGCLVTGPNYKKAYRTL 72
A +KL+ +E+E VRTL +G KR G ++KKAY TL
Sbjct: 47 AVAKLFEVEVESVRTLVSKGKTKRTGGRTGRRSDWKKAYVTL 88
>gi|410612777|ref|ZP_11323850.1| large subunit ribosomal protein L23 [Glaciecola psychrophila 170]
gi|410167664|dbj|GAC37739.1| large subunit ribosomal protein L23 [Glaciecola psychrophila 170]
Length = 100
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 31 AASKLYGLEIEKVRTLNKQGMKKRREGCLVTGPNYKKAYRTLKK 74
A KL+ +E++ VRTLN +G KR ++KKAY LK+
Sbjct: 46 AVEKLFEVEVDSVRTLNVKGKTKRHGSSFGKRKDWKKAYVVLKE 89
>gi|117918659|ref|YP_867851.1| 50S ribosomal protein L23 [Shewanella sp. ANA-3]
gi|117610991|gb|ABK46445.1| LSU ribosomal protein L23P [Shewanella sp. ANA-3]
Length = 101
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 31 AASKLYGLEIEKVRTLNKQGMKKRREGCLVTGPNYKKAYRTL 72
A +KL+ +E+E VRTL +G KR G ++KKAY TL
Sbjct: 47 AVAKLFEVEVESVRTLVSKGKTKRTGGRAGRRSDWKKAYVTL 88
>gi|124021018|sp|Q8EK66.2|RL23_SHEON RecName: Full=50S ribosomal protein L23
Length = 100
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 31 AASKLYGLEIEKVRTLNKQGMKKRREGCLVTGPNYKKAYRTL 72
A +KL+ +E+E VRTL +G KR G ++KKAY TL
Sbjct: 46 AVAKLFEVEVESVRTLVSKGKTKRTGGRTGRRSDWKKAYVTL 87
>gi|412993764|emb|CCO14275.1| predicted protein [Bathycoccus prasinos]
Length = 149
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 20 NIKEIAFKTMHAASKLYGLEIEKVRTLNKQGMKKR--REGCLVTGPNYKKAYRTL 72
N+ + KT + ++G+E+ KV T N +G KKR G L P+YKK Y TL
Sbjct: 82 NVTKTEIKTF--LTDVHGIEVLKVDTANYEGKKKRNLERGNLFRKPDYKKVYVTL 134
>gi|407792410|ref|ZP_11139471.1| 50S ribosomal protein L23 [Gallaecimonas xiamenensis 3-C-1]
gi|407197275|gb|EKE67345.1| 50S ribosomal protein L23 [Gallaecimonas xiamenensis 3-C-1]
Length = 99
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 31 AASKLYGLEIEKVRTLNKQGMKKRREGCLVTGPNYKKAYRTLK 73
A KL+ +E++ VRT+N +G KR ++KKAY TLK
Sbjct: 46 AVEKLFEVEVDAVRTVNVKGKTKRHGARFGRRSDWKKAYVTLK 88
>gi|91791541|ref|YP_561192.1| 50S ribosomal protein L23 [Shewanella denitrificans OS217]
gi|123357237|sp|Q12SV7.1|RL23_SHEDO RecName: Full=50S ribosomal protein L23
gi|91713543|gb|ABE53469.1| LSU ribosomal protein L23P [Shewanella denitrificans OS217]
Length = 100
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 31 AASKLYGLEIEKVRTLNKQGMKKRREGCLVTGPNYKKAYRTL 72
A +KL+ +E++ VRTL +G KR G + ++KKAY TL
Sbjct: 46 AVAKLFEVEVDSVRTLVNKGKTKRTGGRVGRRSDWKKAYVTL 87
>gi|88860957|ref|ZP_01135593.1| 50S ribosomal protein L23 [Pseudoalteromonas tunicata D2]
gi|88817170|gb|EAR26989.1| 50S ribosomal protein L23 [Pseudoalteromonas tunicata D2]
Length = 100
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 31 AASKLYGLEIEKVRTLNKQGMKKRREGCLVTGPNYKKAYRTLKK 74
A +KL+ +E+ VRTLN +G KR ++KKAY TLK+
Sbjct: 46 AVAKLFEVEVTGVRTLNVKGKTKRTGARFGRRSDWKKAYVTLKE 89
>gi|333894738|ref|YP_004468613.1| 50S ribosomal protein L23 [Alteromonas sp. SN2]
gi|332994756|gb|AEF04811.1| 50S ribosomal protein L23 [Alteromonas sp. SN2]
Length = 99
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 31 AASKLYGLEIEKVRTLNKQGMKKRREGCLVTGPNYKKAYRTLKK 74
A KL+ +E+E VRT+N +G KR ++KKAY LK+
Sbjct: 45 AVEKLFEVEVEGVRTVNVKGKTKRHGQSFGKRSDWKKAYVVLKE 88
>gi|381393336|ref|ZP_09919059.1| large subunit ribosomal protein L23 [Glaciecola punicea DSM 14233
= ACAM 611]
gi|379330894|dbj|GAB54192.1| large subunit ribosomal protein L23 [Glaciecola punicea DSM 14233
= ACAM 611]
Length = 99
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 8 FPMKLLMPSSFENIKEIAFKTMHAASKLYGLEIEKVRTLNKQGMKKRREGCLVTGPNYKK 67
F K+L S+ IK A KL+ +E++ VRTLN +G KR ++KK
Sbjct: 29 FVFKVLPDSTKAEIKA-------AVEKLFEVEVQGVRTLNVKGKVKRHGQSFGKRSDWKK 81
Query: 68 AYRTLKK 74
AY LK+
Sbjct: 82 AYVVLKE 88
>gi|21672768|ref|NP_660835.1| 50S ribosomal protein L23 [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
gi|25009074|sp|Q8K952.1|RL23_BUCAP RecName: Full=50S ribosomal protein L23
gi|21623415|gb|AAM68046.1| 50S ribosomal protein L23 [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
Length = 100
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 23 EIAFKTMHAASKLYGLEIEKVRTLNKQGMKKRREGCLVTGPNYKKAYRTLKK 74
EI F A L+ +++E V+T+ +G KKR+ ++ ++KKAY +KK
Sbjct: 42 EIKF----AVQNLFNIQVESVKTVYVKGKKKRQSNRIIYRSDWKKAYIKVKK 89
>gi|410638206|ref|ZP_11348770.1| large subunit ribosomal protein L23 [Glaciecola lipolytica E3]
gi|410142126|dbj|GAC15975.1| large subunit ribosomal protein L23 [Glaciecola lipolytica E3]
Length = 100
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%)
Query: 31 AASKLYGLEIEKVRTLNKQGMKKRREGCLVTGPNYKKAYRTLKK 74
A KL+ +E+ VRTLN +G KR ++KKAY LK+
Sbjct: 46 AVEKLFEVEVSSVRTLNVKGKTKRHGQSFGKRSDWKKAYVVLKE 89
>gi|383767989|ref|YP_005446972.1| 50S ribosomal protein L23 [Phycisphaera mikurensis NBRC 102666]
gi|381388259|dbj|BAM05075.1| 50S ribosomal protein L23 [Phycisphaera mikurensis NBRC 102666]
Length = 93
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 17 SFENIKEIAFKTMHAAS--KLYGLEIEKVRTLNKQGMKKRREGCLVTGPNYKKA 68
+FE I + A K AAS KLYG+ +E V T+N++G KR T P K+A
Sbjct: 28 AFE-IHKDATKPQVAASIAKLYGVRVESVATMNRKGEAKRNRYGTTTTPTVKRA 80
>gi|120596991|ref|YP_961565.1| 50S ribosomal protein L23 [Shewanella sp. W3-18-1]
gi|126176353|ref|YP_001052502.1| 50S ribosomal protein L23 [Shewanella baltica OS155]
gi|146294839|ref|YP_001185263.1| 50S ribosomal protein L23 [Shewanella putrefaciens CN-32]
gi|152998751|ref|YP_001364432.1| 50S ribosomal protein L23 [Shewanella baltica OS185]
gi|160873328|ref|YP_001552644.1| 50S ribosomal protein L23 [Shewanella baltica OS195]
gi|217975199|ref|YP_002359950.1| 50S ribosomal protein L23 [Shewanella baltica OS223]
gi|336309715|ref|ZP_08564695.1| LSU ribosomal protein L23p (L23Ae) [Shewanella sp. HN-41]
gi|373951454|ref|ZP_09611415.1| Ribosomal protein L25/L23 [Shewanella baltica OS183]
gi|378706566|ref|YP_005271460.1| 50S ribosomal protein L25 [Shewanella baltica OS678]
gi|386311957|ref|YP_006008122.1| 50S ribosomal protein L25 [Shewanella putrefaciens 200]
gi|386322726|ref|YP_006018843.1| 50S ribosomal protein L25 [Shewanella baltica BA175]
gi|386343105|ref|YP_006039471.1| 50S ribosomal protein L25 [Shewanella baltica OS117]
gi|418025003|ref|ZP_12663983.1| Ribosomal protein L25/L23 [Shewanella baltica OS625]
gi|120557084|gb|ABM23011.1| LSU ribosomal protein L23P [Shewanella sp. W3-18-1]
gi|125999558|gb|ABN63633.1| LSU ribosomal protein L23P [Shewanella baltica OS155]
gi|145566529|gb|ABP77464.1| LSU ribosomal protein L23P [Shewanella putrefaciens CN-32]
gi|151363369|gb|ABS06369.1| Ribosomal protein L25/L23 [Shewanella baltica OS185]
gi|160858850|gb|ABX47384.1| Ribosomal protein L25/L23 [Shewanella baltica OS195]
gi|217500334|gb|ACK48527.1| Ribosomal protein L25/L23 [Shewanella baltica OS223]
gi|315265555|gb|ADT92408.1| Ribosomal protein L25/L23 [Shewanella baltica OS678]
gi|319424582|gb|ADV52656.1| Ribosomal protein L25/L23 [Shewanella putrefaciens 200]
gi|333816871|gb|AEG09537.1| Ribosomal protein L25/L23 [Shewanella baltica BA175]
gi|334865506|gb|AEH15977.1| Ribosomal protein L25/L23 [Shewanella baltica OS117]
gi|335866829|gb|EGM71782.1| LSU ribosomal protein L23p (L23Ae) [Shewanella sp. HN-41]
gi|353535416|gb|EHC04978.1| Ribosomal protein L25/L23 [Shewanella baltica OS625]
gi|373888054|gb|EHQ16946.1| Ribosomal protein L25/L23 [Shewanella baltica OS183]
Length = 101
Score = 35.0 bits (79), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 31 AASKLYGLEIEKVRTLNKQGMKKRREGCLVTGPNYKKAYRTL 72
A +KL+ +E++ VRTL +G KR G ++KKAY TL
Sbjct: 47 AVAKLFEVEVDSVRTLVSKGKTKRTGGRTGRRSDWKKAYVTL 88
>gi|222056703|ref|YP_002539065.1| 50S ribosomal protein L23 [Geobacter daltonii FRC-32]
gi|221565992|gb|ACM21964.1| Ribosomal protein L25/L23 [Geobacter daltonii FRC-32]
Length = 94
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 30 HAASKLYGLEIEKVRTLNKQGMKKRREGCLVTGPNYKKAYRTLKK 74
+A L+ +E+E V+T+N G KR + N+KKAY TLK+
Sbjct: 41 NAVKTLFNVEVESVKTVNVAGKIKRVGKNIGKRSNWKKAYVTLKE 85
>gi|397905103|ref|ZP_10505975.1| LSU ribosomal protein L23p (L23Ae) [Caloramator australicus RC3]
gi|397161898|emb|CCJ33309.1| LSU ribosomal protein L23p (L23Ae) [Caloramator australicus RC3]
Length = 99
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%)
Query: 31 AASKLYGLEIEKVRTLNKQGMKKRREGCLVTGPNYKKA 68
A +++G+++E V+T+N QG KKR P+YKKA
Sbjct: 43 AIEQIFGVKVESVKTINYQGKKKRVGFNFGKRPDYKKA 80
>gi|414069886|ref|ZP_11405876.1| 50S ribosomal protein L23 [Pseudoalteromonas sp. Bsw20308]
gi|410807609|gb|EKS13585.1| 50S ribosomal protein L23 [Pseudoalteromonas sp. Bsw20308]
Length = 89
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 31 AASKLYGLEIEKVRTLNKQGMKKRREGCLVTGPNYKKAYRTLKK 74
A KL+ +E+ VRTLN +G KR ++KKAY TLK+
Sbjct: 35 AVEKLFEVEVTGVRTLNVKGKTKRTGARFGRRSDWKKAYVTLKE 78
>gi|332531859|ref|ZP_08407744.1| 50S ribosomal protein L23 [Pseudoalteromonas haloplanktis
ANT/505]
gi|359443703|ref|ZP_09233536.1| large subunit ribosomal protein L23 [Pseudoalteromonas sp.
BSi20429]
gi|359453250|ref|ZP_09242571.1| large subunit ribosomal protein L23 [Pseudoalteromonas sp.
BSi20495]
gi|392534774|ref|ZP_10281911.1| 50S ribosomal protein L23 [Pseudoalteromonas arctica A 37-1-2]
gi|332038835|gb|EGI75277.1| 50S ribosomal protein L23 [Pseudoalteromonas haloplanktis
ANT/505]
gi|358034469|dbj|GAA69785.1| large subunit ribosomal protein L23 [Pseudoalteromonas sp.
BSi20429]
gi|358049706|dbj|GAA78820.1| large subunit ribosomal protein L23 [Pseudoalteromonas sp.
BSi20495]
Length = 100
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 31 AASKLYGLEIEKVRTLNKQGMKKRREGCLVTGPNYKKAYRTLKK 74
A KL+ +E+ VRTLN +G KR ++KKAY TLK+
Sbjct: 46 AVEKLFEVEVTGVRTLNVKGKTKRTGARFGRRSDWKKAYVTLKE 89
>gi|114561338|ref|YP_748851.1| 50S ribosomal protein L23 [Shewanella frigidimarina NCIMB 400]
gi|122301113|sp|Q089Q2.1|RL23_SHEFN RecName: Full=50S ribosomal protein L23
gi|114332631|gb|ABI70013.1| LSU ribosomal protein L23P [Shewanella frigidimarina NCIMB 400]
Length = 100
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 31 AASKLYGLEIEKVRTLNKQGMKKRREGCLVTGPNYKKAYRTL 72
A +KL+ +E++ VRTL +G KR G + ++KKAY TL
Sbjct: 46 AVAKLFEVEVDSVRTLVNKGKTKRTGGRVGRRIDWKKAYVTL 87
>gi|332139850|ref|YP_004425588.1| 50S ribosomal protein L23 [Alteromonas macleodii str. 'Deep
ecotype']
gi|332139863|ref|YP_004425601.1| 50S ribosomal protein L23 [Alteromonas macleodii str. 'Deep
ecotype']
gi|406595275|ref|YP_006746405.1| 50S ribosomal protein L23 [Alteromonas macleodii ATCC 27126]
gi|407682204|ref|YP_006797378.1| 50S ribosomal protein L23 [Alteromonas macleodii str. 'English
Channel 673']
gi|407686124|ref|YP_006801297.1| 50S ribosomal protein L23 [Alteromonas macleodii str. 'Balearic
Sea AD45']
gi|407698606|ref|YP_006823393.1| 50S ribosomal protein L23 [Alteromonas macleodii str. 'Black Sea
11']
gi|410860055|ref|YP_006975289.1| 50S ribosomal protein L23 [Alteromonas macleodii AltDE1]
gi|327549872|gb|AEA96590.1| 50S ribosomal protein L23 [Alteromonas macleodii str. 'Deep
ecotype']
gi|327549885|gb|AEA96603.1| 50S ribosomal protein L23 [Alteromonas macleodii str. 'Deep
ecotype']
gi|406372596|gb|AFS35851.1| 50S ribosomal protein L23 [Alteromonas macleodii ATCC 27126]
gi|407243815|gb|AFT73001.1| 50S ribosomal protein L23 [Alteromonas macleodii str. 'English
Channel 673']
gi|407247753|gb|AFT76938.1| 50S ribosomal protein L23 [Alteromonas macleodii str. 'Black Sea
11']
gi|407289504|gb|AFT93816.1| 50S ribosomal protein L23 [Alteromonas macleodii str. 'Balearic
Sea AD45']
gi|410817317|gb|AFV83934.1| 50S ribosomal protein L23 [Alteromonas macleodii AltDE1]
gi|452097198|gb|AGF95405.1| 50S ribosomal protein L23 [uncultured Alteromonas sp.]
Length = 99
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 31 AASKLYGLEIEKVRTLNKQGMKKRREGCLVTGPNYKKAYRTLKK 74
A KL+ +E+E VRT+N +G KR ++KKAY LK+
Sbjct: 45 AVEKLFEVEVEGVRTVNVKGKTKRHGMSFGKRSDWKKAYVVLKE 88
>gi|27904940|ref|NP_778066.1| 50S ribosomal protein L23 [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
gi|48474417|sp|Q89A70.1|RL23_BUCBP RecName: Full=50S ribosomal protein L23
gi|27904338|gb|AAO27171.1| 50S ribosomal protein L23 [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
Length = 100
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 31 AASKLYGLEIEKVRTLNKQGMKKRREGCLVTGPNYKKAYRTLKK 74
A ++ + ++ V TL QG KR++ + N+KKAY TLK+
Sbjct: 46 AVQNMFNVAVKNVNTLVVQGKCKRKKSRITCSSNWKKAYVTLKR 89
>gi|327399521|ref|YP_004340390.1| 50S ribosomal protein L25 [Hippea maritima DSM 10411]
gi|327182150|gb|AEA34331.1| Ribosomal protein L25/L23 [Hippea maritima DSM 10411]
Length = 91
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 31 AASKLYGLEIEKVRTLNKQGMKKRREGCLVTGPNYKKAYRTLK 73
A +L+G+E++KV LN +G K G P+YKKA TLK
Sbjct: 41 AVEELFGVEVDKVNILNVKGKTKVFRGIKGKRPSYKKAIVTLK 83
>gi|289209327|ref|YP_003461393.1| 50S ribosomal protein L25/L23 [Thioalkalivibrio sp. K90mix]
gi|288944958|gb|ADC72657.1| Ribosomal protein L25/L23 [Thioalkalivibrio sp. K90mix]
Length = 98
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 1 MGNMLIDFPMKLLMPSSFENIKEIAFKTMHAASKLYGLEIEKVRTLNKQGMKKRREGCLV 60
M + + ++L +S E IK A L+ + +E VRTLN+QG KKR
Sbjct: 20 MAGEVGQYVFRVLPDASKEEIKA-------AVEHLFQVRVENVRTLNQQGKKKRFGRLFG 72
Query: 61 TGPNYKKAYRTL 72
++KKAY L
Sbjct: 73 RRNHWKKAYVAL 84
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.135 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,058,508,712
Number of Sequences: 23463169
Number of extensions: 30381507
Number of successful extensions: 73246
Number of sequences better than 100.0: 103
Number of HSP's better than 100.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 73141
Number of HSP's gapped (non-prelim): 103
length of query: 75
length of database: 8,064,228,071
effective HSP length: 46
effective length of query: 29
effective length of database: 6,984,922,297
effective search space: 202562746613
effective search space used: 202562746613
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 69 (31.2 bits)