Query 048067
Match_columns 75
No_of_seqs 149 out of 1054
Neff 5.1
Searched_HMMs 29240
Date Mon Mar 25 10:02:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048067.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048067hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tve_T 50S ribosomal protein L 99.9 8.6E-25 2.9E-29 138.8 7.2 69 6-74 3-83 (92)
2 3r8s_T 50S ribosomal protein L 99.9 2.7E-25 9.2E-30 141.4 4.3 71 5-75 7-90 (93)
3 2zjr_Q 50S ribosomal protein L 99.9 5.9E-25 2E-29 140.3 4.0 71 5-75 3-85 (95)
4 1vq8_S 50S ribosomal protein L 99.7 5.2E-18 1.8E-22 106.3 4.9 58 5-75 2-72 (85)
5 3j21_T 50S ribosomal protein L 99.7 2.3E-17 8E-22 103.6 5.3 58 5-75 3-73 (86)
6 2zkr_s 60S ribosomal protein L 99.6 1.2E-16 4.1E-21 109.6 3.9 57 6-75 74-143 (156)
7 3u5e_X 60S ribosomal protein L 99.6 4.5E-16 1.5E-20 105.4 3.1 56 6-74 60-128 (142)
8 3iz5_X 60S ribosomal protein L 99.6 1.1E-15 3.7E-20 104.5 4.3 57 5-74 69-138 (152)
9 4a17_R RPL23A, 60S ribosomal p 99.6 8.4E-16 2.9E-20 104.9 3.8 56 6-74 68-136 (150)
10 3bbo_V Ribosomal protein L23; 99.6 3.2E-16 1.1E-20 110.6 1.6 57 6-75 112-181 (198)
No 1
>3tve_T 50S ribosomal protein L23; RNA, ribosome, tRNA, translation, mRNA; 3.10A {Thermus thermophilus} PDB: 3pyr_T 3pyo_T 3pyv_T 3pyt_T 3tvh_T 1n88_A 1vsa_R 1vsp_R 2hgj_W 2hgq_W 2hgu_W 2j01_X 2j03_X 2jl6_X 2jl8_X 2v47_X 2v49_X 2wdi_X 2wdj_X 2wdl_X ...
Probab=99.91 E-value=8.6e-25 Score=138.84 Aligned_cols=69 Identities=25% Similarity=0.250 Sum_probs=62.2
Q ss_pred CCcceeeecCc---cccCCCeEEEEEcCCCCc---------eeccEEceEEEEeeCCceeeecceeeeCCCeeEEEEEec
Q 048067 6 IDFPMKLLMPS---SFENIKEIAFKTMHAASK---------LYGLEIEKVRTLNKQGMKKRREGCLVTGPNYKKAYRTLK 73 (75)
Q Consensus 6 ~n~~~klv~~~---~~~~~n~y~F~V~~~anK---------~f~VkV~~VnT~~~~gK~Kr~~~~~g~~~~~KKA~VtL~ 73 (75)
.|++..|+.+. .+.+.|+|+|.||++||| +|||+|.+|||+|++||.||.|+..|++++||||||||+
T Consensus 3 ~~iI~~P~iTEKa~~~~e~n~~~F~V~~~AnK~qIK~aVe~lf~VkV~~VnT~~~~gK~kR~g~~~G~~~~~KKA~VtL~ 82 (92)
T 3tve_T 3 YDVILAPVLSEKAYAGFAEGKYTFWVHPKATKTEIKNAVETAFKVKVVKVNTLHVRGKKKRLGRYLGKRPDRKKAIVQVA 82 (92)
T ss_dssp HHHEEEECCSHHHHTTTTTTEEEEEECTTCCHHHHHHHHHHHTTCCEEEEEEEEECCCEEESSSCEEECCCEEEEEEEEC
T ss_pred hheecccccCHHHHHHhhCCEEEEEECCCCCHHHHHHHHHHHhCCceeeeeeeeeCCceeeeccccccCCCceEEEEEcC
Confidence 36788899982 333349999999999999 999999999999999999999999999999999999998
Q ss_pred C
Q 048067 74 K 74 (75)
Q Consensus 74 ~ 74 (75)
+
T Consensus 83 ~ 83 (92)
T 3tve_T 83 P 83 (92)
T ss_dssp T
T ss_pred C
Confidence 6
No 2
>3r8s_T 50S ribosomal protein L23; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 3fik_T 3j19_T 2wwq_T 3oat_T* 3oas_T* 3ofd_T 3ofc_T 3ofr_T* 3ofz_T* 3og0_T 3ofq_T 3r8t_T 2j28_T 3e1b_M 3e1d_M 3iy9_T 3i1n_T 1p85_R 1p86_R 1vs8_T ...
Probab=99.91 E-value=2.7e-25 Score=141.41 Aligned_cols=71 Identities=31% Similarity=0.407 Sum_probs=64.1
Q ss_pred CCCcceeeecCc----cccCCCeEEEEEcCCCCc---------eeccEEceEEEEeeCCceeeecceeeeCCCeeEEEEE
Q 048067 5 LIDFPMKLLMPS----SFENIKEIAFKTMHAASK---------LYGLEIEKVRTLNKQGMKKRREGCLVTGPNYKKAYRT 71 (75)
Q Consensus 5 ~~n~~~klv~~~----~~~~~n~y~F~V~~~anK---------~f~VkV~~VnT~~~~gK~Kr~~~~~g~~~~~KKA~Vt 71 (75)
+.|++..|+.+. ..|++|+|+|.||++||| +|||+|.+|||++++||.||.|+..|++++|||||||
T Consensus 7 ~~~iIk~P~iTEKa~~~~e~~n~~~F~V~~~AnK~eIK~AVE~lf~VkV~~VnT~~~~gK~kR~g~~~G~~~~~KKAiVt 86 (93)
T 3r8s_T 7 LLKVLRAPHVSEKASTAMEKSNTIVLKVAKDATKAEIKAAVQKLFEVEVEVVNTLVVKGKVKRHGQRIGRRSDWKKAYVT 86 (93)
T ss_dssp HHHHEEEECCSHHHHHHHHTTSEEEEEECSSCCHHHHHHHHHHHSCCCCCEEEEEEECCCBCCSSSSCCBCCCEEEEEEE
T ss_pred HHhhhhccccCHHHHHHHHhCCEEEEEECCCCCHHHHHHHHHHHcCCceEEEEEEEeCCceeeeCCccccCCCcEEEEEE
Confidence 357888999983 245569999999999999 9999999999999999999999999999999999999
Q ss_pred ecCC
Q 048067 72 LKKP 75 (75)
Q Consensus 72 L~~p 75 (75)
|++.
T Consensus 87 L~~g 90 (93)
T 3r8s_T 87 LKEG 90 (93)
T ss_dssp CCSC
T ss_pred cCCc
Confidence 9873
No 3
>2zjr_Q 50S ribosomal protein L23; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: d.12.1.1 PDB: 1sm1_R* 2aar_R 2d3o_R 2zjp_Q* 2zjq_Q 1nkw_R 3cf5_Q* 3dll_Q* 3pio_Q* 3pip_Q* 1nwy_R* 1nwx_R* 1xbp_R* 1pnu_R 1pny_R 1vor_U 1vou_U 1vow_U 1voy_U 1vp0_U
Probab=99.90 E-value=5.9e-25 Score=140.28 Aligned_cols=71 Identities=21% Similarity=0.208 Sum_probs=63.7
Q ss_pred CCCcceeeecCc---cccCCCeEEEEEcCCCCc---------eeccEEceEEEEeeCCceeeecceeeeCCCeeEEEEEe
Q 048067 5 LIDFPMKLLMPS---SFENIKEIAFKTMHAASK---------LYGLEIEKVRTLNKQGMKKRREGCLVTGPNYKKAYRTL 72 (75)
Q Consensus 5 ~~n~~~klv~~~---~~~~~n~y~F~V~~~anK---------~f~VkV~~VnT~~~~gK~Kr~~~~~g~~~~~KKA~VtL 72 (75)
+.|++..|+++. .+.+.|+|+|.|+++||| +|||+|.+|||+|++||.||.|+..|++++||||||||
T Consensus 3 ~~~iI~~PviTEKs~~~~e~n~y~F~V~~~anK~eIK~aVE~lf~VkV~~VNT~~~~gK~kR~g~~~G~~~~~KKAiVtL 82 (95)
T 2zjr_Q 3 HYDILQAPVISEKAYSAMERGVYSFWVSPKATKTEIKDAIQQAFGVRVIGISTMNVPGKRKRVGRFIGQRNDRKKAIVRL 82 (95)
T ss_dssp CSSSCCEECCTHHHHHHHTTTCCEEEECSSCTHHHHHHHHHHHHCCCCSEEEECCBCCCCCSSSSCCCCCCCBEEEEEEC
T ss_pred hHhceeccccCHHHHHHHHCCEEEEEEcCCCCHHHHHHHHHHHhCCCceEEEeEEeCCccceeccccccCCCcEEEEEEe
Confidence 358999999982 334457899999999999 99999999999999999999999999999999999999
Q ss_pred cCC
Q 048067 73 KKP 75 (75)
Q Consensus 73 ~~p 75 (75)
++.
T Consensus 83 ~~g 85 (95)
T 2zjr_Q 83 AEG 85 (95)
T ss_dssp CSS
T ss_pred CCC
Confidence 873
No 4
>1vq8_S 50S ribosomal protein L23P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.12.1.1 PDB: 1vq4_S* 1vq5_S* 1vq6_S* 1vq7_S* 1s72_S* 1vq9_S* 1vqk_S* 1vql_S* 1vqm_S* 1vqn_S* 1vqo_S* 1vqp_S* 1yhq_S* 1yi2_S* 1yij_S* 1yit_S* 1yj9_S* 1yjn_S* 1yjw_S* 2otj_S* ...
Probab=99.72 E-value=5.2e-18 Score=106.29 Aligned_cols=58 Identities=24% Similarity=0.241 Sum_probs=50.4
Q ss_pred CCCcceeeecCc----cccCCCeEEEEEcCCCCc---------eeccEEceEEEEeeCCceeeecceeeeCCCeeEEEEE
Q 048067 5 LIDFPMKLLMPS----SFENIKEIAFKTMHAASK---------LYGLEIEKVRTLNKQGMKKRREGCLVTGPNYKKAYRT 71 (75)
Q Consensus 5 ~~n~~~klv~~~----~~~~~n~y~F~V~~~anK---------~f~VkV~~VnT~~~~gK~Kr~~~~~g~~~~~KKA~Vt 71 (75)
..|++..|+.+. ..|++|+|+|.||++||| +|||+|.+|||++.+ ++||||||+
T Consensus 2 ~~~iIk~P~iTEKa~~~~e~~n~~~F~V~~~AnK~qIK~ave~lf~VkV~~VNT~~~~-------------~~~KKA~Vt 68 (85)
T 1vq8_S 2 SWDVIKHPHVTEKAMNDMDFQNKLQFAVDDRASKGEVADAVEEQYDVTVEQVNTQNTM-------------DGEKKAVVR 68 (85)
T ss_dssp CCCSEEEECCSHHHHHHHHHSCEEEEEECTTCCHHHHHHHHHHHHCCCEEEEEEEECT-------------TSSEEEEEE
T ss_pred CcceeeccccCHHHHHHHHhCCEEEEEECCCCCHHHHHHHHHHHhCCCceEEEeeecC-------------CCceEEEEE
Confidence 458899999983 245579999999999999 999999999999987 369999999
Q ss_pred ecCC
Q 048067 72 LKKP 75 (75)
Q Consensus 72 L~~p 75 (75)
|++.
T Consensus 69 L~~g 72 (85)
T 1vq8_S 69 LSED 72 (85)
T ss_dssp ECTT
T ss_pred ECCC
Confidence 9874
No 5
>3j21_T 50S ribosomal protein L23P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=99.69 E-value=2.3e-17 Score=103.56 Aligned_cols=58 Identities=26% Similarity=0.362 Sum_probs=50.1
Q ss_pred CCCcceeeecCc----cccCCCeEEEEEcCCCCc---------eeccEEceEEEEeeCCceeeecceeeeCCCeeEEEEE
Q 048067 5 LIDFPMKLLMPS----SFENIKEIAFKTMHAASK---------LYGLEIEKVRTLNKQGMKKRREGCLVTGPNYKKAYRT 71 (75)
Q Consensus 5 ~~n~~~klv~~~----~~~~~n~y~F~V~~~anK---------~f~VkV~~VnT~~~~gK~Kr~~~~~g~~~~~KKA~Vt 71 (75)
+.+++..|+.+. ..|++|+|+|.|+++||| +|||+|.+|||++.+ ++||||||+
T Consensus 3 ~~~iIk~P~iTEKa~~~~e~~n~~~F~Vd~~AnK~qIK~AVe~lf~VkV~~VNTl~~~-------------~~~KKA~V~ 69 (86)
T 3j21_T 3 PYKVIIRPVVTEKAISLIEKENKLTFIVDRRATKQDIKRAVEEIFNVKVEKVNTLITP-------------RGEKKAYVK 69 (86)
T ss_dssp CCCCEEECCCSHHHHHHHHTSCEEEEEECTTCCHHHHHHHHHHHTTCCEEEEEEEECT-------------TSCEEEEEE
T ss_pred hHHhhhccccCHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEeEcC-------------CCceEEEEE
Confidence 357888999983 245579999999999999 999999999999986 469999999
Q ss_pred ecCC
Q 048067 72 LKKP 75 (75)
Q Consensus 72 L~~p 75 (75)
|++.
T Consensus 70 L~~~ 73 (86)
T 3j21_T 70 LKPE 73 (86)
T ss_dssp ECTT
T ss_pred cCCC
Confidence 9873
No 6
>2zkr_s 60S ribosomal protein L23A; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=99.63 E-value=1.2e-16 Score=109.58 Aligned_cols=57 Identities=28% Similarity=0.328 Sum_probs=48.8
Q ss_pred CCcceeeecCc----cccCCCeEEEEEcCCCCc---------eeccEEceEEEEeeCCceeeecceeeeCCCeeEEEEEe
Q 048067 6 IDFPMKLLMPS----SFENIKEIAFKTMHAASK---------LYGLEIEKVRTLNKQGMKKRREGCLVTGPNYKKAYRTL 72 (75)
Q Consensus 6 ~n~~~klv~~~----~~~~~n~y~F~V~~~anK---------~f~VkV~~VnT~~~~gK~Kr~~~~~g~~~~~KKA~VtL 72 (75)
.|++..|+.+. .+|++|+|+|.||++||| +|||+|.+|||+|++| +||||||+|
T Consensus 74 ~~iIk~PliTEKa~~~~E~~n~yvF~Vd~~AnK~qIK~AVEklf~VkV~kVNTl~~~~-------------~~KKAiVtL 140 (156)
T 2zkr_s 74 YAIIKFPLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPD-------------GEKKAYVRL 140 (156)
T ss_dssp --CEEEECCSHHHHHHHHHHCEEEEEECTTCCHHHHHHHHHHHHCCCEEEEEEEECSS-------------SCEEEEEEE
T ss_pred HHhHhcccccHHHHHHHHhCCcEEEEEECCCCHHHHHHHHHHHhCCcceEEEeeEcCC-------------CceEEEEEE
Confidence 47889999983 245569999999999999 9999999999999987 599999999
Q ss_pred cCC
Q 048067 73 KKP 75 (75)
Q Consensus 73 ~~p 75 (75)
++.
T Consensus 141 ~~g 143 (156)
T 2zkr_s 141 APD 143 (156)
T ss_dssp CTT
T ss_pred CCC
Confidence 863
No 7
>3u5e_X 60S ribosomal protein L25; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 2wwa_K 2ww9_K 3izc_X 3izs_X 2wwb_K 3o5h_W 3o58_W 3u5i_X 4b6a_X 1s1i_T 3jyw_T
Probab=99.59 E-value=4.5e-16 Score=105.40 Aligned_cols=56 Identities=27% Similarity=0.356 Sum_probs=48.5
Q ss_pred CCcceeeecCcc----ccCCCeEEEEEcCCCCc---------eeccEEceEEEEeeCCceeeecceeeeCCCeeEEEEEe
Q 048067 6 IDFPMKLLMPSS----FENIKEIAFKTMHAASK---------LYGLEIEKVRTLNKQGMKKRREGCLVTGPNYKKAYRTL 72 (75)
Q Consensus 6 ~n~~~klv~~~~----~~~~n~y~F~V~~~anK---------~f~VkV~~VnT~~~~gK~Kr~~~~~g~~~~~KKA~VtL 72 (75)
.|++..|+.+.+ .|++|+|+|.||++||| +|||+|.+|||+|++| +||||||+|
T Consensus 60 ~~IIk~PliTEKa~~~~E~~N~~vF~Vd~~AnK~qIK~AVEklf~VkV~kVNTl~~~~-------------g~KKAyV~L 126 (142)
T 3u5e_X 60 YKVIEQPITSETAMKKVEDGNILVFQVSMKANKYQIKKAVKELYEVDVLKVNTLVRPN-------------GTKKAYVRL 126 (142)
T ss_dssp HHHEEEECCCHHHHHHHHHHCEEEEEECTTCCHHHHHHHHHHHHSCCEEEEEEEECTT-------------SCEEEEEEE
T ss_pred HHhhhcCCcCHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHHHhCCceeEEEeeEcCC-------------CceEEEEEe
Confidence 367788888832 35569999999999999 9999999999999975 699999999
Q ss_pred cC
Q 048067 73 KK 74 (75)
Q Consensus 73 ~~ 74 (75)
++
T Consensus 127 ~~ 128 (142)
T 3u5e_X 127 TA 128 (142)
T ss_dssp CT
T ss_pred CC
Confidence 86
No 8
>3iz5_X 60S ribosomal protein L23A (L23P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_X 2go5_4 2j37_4
Probab=99.58 E-value=1.1e-15 Score=104.52 Aligned_cols=57 Identities=28% Similarity=0.324 Sum_probs=49.6
Q ss_pred CCCcceeeecCcc----ccCCCeEEEEEcCCCCc---------eeccEEceEEEEeeCCceeeecceeeeCCCeeEEEEE
Q 048067 5 LIDFPMKLLMPSS----FENIKEIAFKTMHAASK---------LYGLEIEKVRTLNKQGMKKRREGCLVTGPNYKKAYRT 71 (75)
Q Consensus 5 ~~n~~~klv~~~~----~~~~n~y~F~V~~~anK---------~f~VkV~~VnT~~~~gK~Kr~~~~~g~~~~~KKA~Vt 71 (75)
+.|++..|+.+.+ .|++|+|+|.||.+||| +|||+|.+|||+|.+ .+||||||+
T Consensus 69 ~~~IIk~PliTEKa~~~~E~~N~~vF~Vd~~AnK~qIK~AVEklf~VkV~kVNTl~~~-------------~g~KKAyV~ 135 (152)
T 3iz5_X 69 QYQILKYPLTTESAMKKIEDNNTLVFIVDLKADKKKIKAAVKKMYDIQAKKVNTLIRP-------------DGKKKAYVK 135 (152)
T ss_dssp CCCSEEEECCSHHHHHHHHHHSEEEEEECSSCCSHHHHHHHHHHHTCCEEEEEEEECT-------------TSSEEEEEE
T ss_pred HHHHHhhCCcCHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHHHhCCcceEEEeeEcC-------------CCceEEEEE
Confidence 4578889999832 45569999999999999 999999999999985 479999999
Q ss_pred ecC
Q 048067 72 LKK 74 (75)
Q Consensus 72 L~~ 74 (75)
|++
T Consensus 136 L~~ 138 (152)
T 3iz5_X 136 LTP 138 (152)
T ss_dssp ECT
T ss_pred cCC
Confidence 986
No 9
>4a17_R RPL23A, 60S ribosomal protein L21; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_R 4a1c_R 4a1e_R
Probab=99.58 E-value=8.4e-16 Score=104.87 Aligned_cols=56 Identities=27% Similarity=0.364 Sum_probs=48.9
Q ss_pred CCcceeeecCc----cccCCCeEEEEEcCCCCc---------eeccEEceEEEEeeCCceeeecceeeeCCCeeEEEEEe
Q 048067 6 IDFPMKLLMPS----SFENIKEIAFKTMHAASK---------LYGLEIEKVRTLNKQGMKKRREGCLVTGPNYKKAYRTL 72 (75)
Q Consensus 6 ~n~~~klv~~~----~~~~~n~y~F~V~~~anK---------~f~VkV~~VnT~~~~gK~Kr~~~~~g~~~~~KKA~VtL 72 (75)
.+++..|+.+. ..|++|+|+|.||++||| +|||+|.+|||+++++ +||||||+|
T Consensus 68 y~IIk~PliTEKa~~~~E~~N~~vF~Vd~kAnK~qIK~AVEklf~VkV~kVNTl~~p~-------------g~KKAyV~L 134 (150)
T 4a17_R 68 HSVVKTPLTTEKAMKKMEDENTMVFYVHNRSTKPQIKSAFEKLYNVKVRSVNTLNTIT-------------GNKKAYIRL 134 (150)
T ss_dssp HHHEEEECCSHHHHHHHHHSSEEEEEECTTCCHHHHHHHHHHHHCCCEEEEEEEECTT-------------SCEEEEEEE
T ss_pred HHhhhccccCHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHHHhCCceeEEEeeEcCC-------------CcEEEEEEc
Confidence 36788888883 245679999999999999 9999999999999975 699999999
Q ss_pred cC
Q 048067 73 KK 74 (75)
Q Consensus 73 ~~ 74 (75)
++
T Consensus 135 a~ 136 (150)
T 4a17_R 135 AA 136 (150)
T ss_dssp CS
T ss_pred CC
Confidence 86
No 10
>3bbo_V Ribosomal protein L23; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=99.57 E-value=3.2e-16 Score=110.61 Aligned_cols=57 Identities=25% Similarity=0.387 Sum_probs=50.2
Q ss_pred CCcceeeecCc----cccCCCeEEEEEcCCCCc---------eeccEEceEEEEeeCCceeeecceeeeCCCeeEEEEEe
Q 048067 6 IDFPMKLLMPS----SFENIKEIAFKTMHAASK---------LYGLEIEKVRTLNKQGMKKRREGCLVTGPNYKKAYRTL 72 (75)
Q Consensus 6 ~n~~~klv~~~----~~~~~n~y~F~V~~~anK---------~f~VkV~~VnT~~~~gK~Kr~~~~~g~~~~~KKA~VtL 72 (75)
.|++..|+.+. .+|+.|+|+|+||++||| +|||+|.+|||++++| +||||||+|
T Consensus 112 ydIIk~PvITEKAmkliE~nNkyvF~Vd~kANK~QIKqAVEkLFdVKV~kVNTln~~g-------------g~KKAyVtL 178 (198)
T 3bbo_V 112 YQILQSPIITEAAIKNIADENSLLFTVDVRADKKMIREAISNFFGVKVRKVNTLIRPD-------------GTKKAYIML 178 (198)
T ss_dssp CCCBCCCCCCHHHHHHHHTSCEECCEECTTCCHHHHHHTTTTTSCCCEEECCCEEETT-------------TEEECCEEE
T ss_pred hheeeccccCHHHHHHHHhCCEEEEEECCCCCHHHHHHHHHHHhCCceeEEEeeEcCC-------------CeEEEEEEe
Confidence 47888899883 256679999999999999 9999999999999997 599999999
Q ss_pred cCC
Q 048067 73 KKP 75 (75)
Q Consensus 73 ~~p 75 (75)
++.
T Consensus 179 aeG 181 (198)
T 3bbo_V 179 NKE 181 (198)
T ss_dssp CTT
T ss_pred CCC
Confidence 863
Done!