Query 048069
Match_columns 213
No_of_seqs 150 out of 1686
Neff 8.2
Searched_HMMs 46136
Date Fri Mar 29 05:58:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048069.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/048069hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0034 Ca2+/calmodulin-depend 99.9 1.8E-24 4E-29 171.8 17.0 161 7-194 26-187 (187)
2 COG5126 FRQ1 Ca2+-binding prot 99.9 1.1E-23 2.3E-28 162.5 16.2 150 3-185 9-159 (160)
3 KOG0044 Ca2+ sensor (EF-Hand s 99.9 6.4E-23 1.4E-27 163.2 13.3 166 3-192 18-185 (193)
4 PTZ00183 centrin; Provisional 99.9 8.8E-20 1.9E-24 140.7 17.4 151 3-185 6-157 (158)
5 KOG0027 Calmodulin and related 99.8 7.3E-20 1.6E-24 141.5 16.1 143 8-182 2-149 (151)
6 PTZ00184 calmodulin; Provision 99.8 1.7E-18 3.8E-23 131.8 17.2 145 6-182 3-148 (149)
7 KOG0028 Ca2+-binding protein ( 99.8 1E-17 2.2E-22 127.4 15.4 147 5-183 24-171 (172)
8 KOG0037 Ca2+-binding protein, 99.7 9.9E-17 2.1E-21 127.9 12.8 158 13-209 56-218 (221)
9 KOG0038 Ca2+-binding kinase in 99.7 1.4E-15 2.9E-20 114.2 13.8 161 4-192 18-187 (189)
10 KOG0031 Myosin regulatory ligh 99.7 5.8E-15 1.3E-19 111.7 15.7 140 6-181 24-164 (171)
11 KOG0030 Myosin essential light 99.5 7.5E-13 1.6E-17 98.7 13.1 143 6-181 3-150 (152)
12 KOG0036 Predicted mitochondria 99.5 9.8E-13 2.1E-17 113.6 14.8 140 7-184 7-148 (463)
13 PF13499 EF-hand_7: EF-hand do 99.3 5.3E-12 1.1E-16 83.7 7.8 66 89-180 1-66 (66)
14 PLN02964 phosphatidylserine de 99.2 1.9E-10 4.2E-15 106.4 12.9 104 6-116 135-243 (644)
15 KOG0027 Calmodulin and related 99.1 7.5E-10 1.6E-14 85.5 11.2 105 51-182 8-113 (151)
16 PTZ00184 calmodulin; Provision 99.1 7.8E-10 1.7E-14 83.8 10.2 100 53-182 13-112 (149)
17 KOG0377 Protein serine/threoni 99.1 9.7E-10 2.1E-14 96.0 11.6 141 15-183 465-616 (631)
18 PTZ00183 centrin; Provisional 99.1 7.6E-10 1.6E-14 85.0 9.9 101 52-182 18-118 (158)
19 KOG4223 Reticulocalbin, calume 99.1 1.1E-09 2.4E-14 92.3 11.0 142 13-185 76-231 (325)
20 KOG0044 Ca2+ sensor (EF-Hand s 99.1 7.4E-10 1.6E-14 88.4 9.4 104 14-119 64-178 (193)
21 KOG4223 Reticulocalbin, calume 99.1 1.7E-09 3.8E-14 91.2 11.3 133 13-178 162-301 (325)
22 cd05022 S-100A13 S-100A13: S-1 99.0 9.3E-10 2E-14 77.6 7.2 67 88-184 8-77 (89)
23 KOG0037 Ca2+-binding protein, 99.0 1.1E-08 2.4E-13 82.1 13.6 130 4-180 87-218 (221)
24 KOG0038 Ca2+-binding kinase in 99.0 1.2E-09 2.6E-14 82.4 7.0 104 22-127 79-188 (189)
25 KOG2562 Protein phosphatase 2 99.0 8E-09 1.7E-13 90.8 12.4 147 6-178 270-420 (493)
26 COG5126 FRQ1 Ca2+-binding prot 98.9 9.8E-09 2.1E-13 79.5 10.0 100 52-182 21-120 (160)
27 cd05027 S-100B S-100B: S-100B 98.9 8.1E-09 1.7E-13 72.7 7.8 69 88-182 8-79 (88)
28 KOG0034 Ca2+/calmodulin-depend 98.9 2E-08 4.3E-13 80.1 10.7 100 18-119 70-178 (187)
29 smart00027 EH Eps15 homology d 98.9 1.9E-08 4.1E-13 71.8 8.8 73 6-81 2-74 (96)
30 PF13499 EF-hand_7: EF-hand do 98.9 8.4E-09 1.8E-13 68.1 6.3 61 15-77 1-66 (66)
31 cd05026 S-100Z S-100Z: S-100Z 98.8 3.6E-08 7.7E-13 70.1 7.8 69 89-183 11-82 (93)
32 PLN02964 phosphatidylserine de 98.8 8.4E-08 1.8E-12 89.1 12.0 99 51-183 143-244 (644)
33 cd05025 S-100A1 S-100A1: S-100 98.8 5.4E-08 1.2E-12 68.9 8.2 74 87-186 8-84 (92)
34 cd05022 S-100A13 S-100A13: S-1 98.8 5.4E-08 1.2E-12 68.6 8.0 69 11-81 5-77 (89)
35 cd05031 S-100A10_like S-100A10 98.7 4.9E-08 1.1E-12 69.3 7.5 71 88-184 8-81 (94)
36 KOG4666 Predicted phosphate ac 98.7 2.4E-08 5.1E-13 84.4 6.0 128 29-190 240-367 (412)
37 KOG4251 Calcium binding protei 98.7 8.8E-08 1.9E-12 78.3 9.0 145 13-180 100-307 (362)
38 smart00027 EH Eps15 homology d 98.7 1E-07 2.3E-12 67.9 8.2 86 86-209 8-93 (96)
39 cd00052 EH Eps15 homology doma 98.7 8.7E-08 1.9E-12 63.0 6.6 62 91-184 2-63 (67)
40 cd05029 S-100A6 S-100A6: S-100 98.7 1.2E-07 2.5E-12 66.8 7.3 69 89-184 11-81 (88)
41 cd05026 S-100Z S-100Z: S-100Z 98.7 1.9E-07 4.1E-12 66.3 8.5 68 12-81 8-83 (93)
42 KOG2643 Ca2+ binding protein, 98.7 1.5E-07 3.3E-12 82.3 9.4 158 18-182 237-453 (489)
43 KOG0751 Mitochondrial aspartat 98.6 2.2E-07 4.8E-12 82.4 10.4 168 6-182 28-207 (694)
44 cd05027 S-100B S-100B: S-100B 98.6 2.2E-07 4.7E-12 65.4 8.2 69 11-81 5-81 (88)
45 cd00213 S-100 S-100: S-100 dom 98.6 2E-07 4.4E-12 65.2 7.8 70 88-183 8-80 (88)
46 KOG0028 Ca2+-binding protein ( 98.6 6.1E-07 1.3E-11 68.8 10.8 102 51-182 33-134 (172)
47 cd05023 S-100A11 S-100A11: S-1 98.6 2.9E-07 6.3E-12 64.9 8.3 71 88-183 9-81 (89)
48 cd00252 SPARC_EC SPARC_EC; ext 98.6 1.6E-07 3.5E-12 69.4 7.2 63 86-182 46-108 (116)
49 cd00213 S-100 S-100: S-100 dom 98.6 3.9E-07 8.4E-12 63.7 7.8 69 10-80 4-80 (88)
50 cd00052 EH Eps15 homology doma 98.5 4.1E-07 8.9E-12 59.8 7.1 61 17-80 2-62 (67)
51 cd00051 EFh EF-hand, calcium b 98.5 4E-07 8.7E-12 57.8 6.9 61 90-180 2-62 (63)
52 PF13833 EF-hand_8: EF-hand do 98.5 3E-07 6.6E-12 58.3 6.2 52 101-182 1-53 (54)
53 KOG0040 Ca2+-binding actin-bun 98.5 2.5E-06 5.4E-11 83.8 14.7 142 4-181 2243-2397(2399)
54 cd05029 S-100A6 S-100A6: S-100 98.5 7.6E-07 1.7E-11 62.6 8.3 70 11-81 7-81 (88)
55 cd05025 S-100A1 S-100A1: S-100 98.5 6.7E-07 1.5E-11 63.2 7.6 68 12-81 7-82 (92)
56 cd05023 S-100A11 S-100A11: S-1 98.5 1.2E-06 2.5E-11 61.8 8.0 69 11-81 6-82 (89)
57 cd05031 S-100A10_like S-100A10 98.4 1.8E-06 3.8E-11 61.3 8.1 66 13-80 7-80 (94)
58 cd00051 EFh EF-hand, calcium b 98.4 1.9E-06 4.1E-11 54.6 7.0 58 54-112 3-60 (63)
59 KOG0036 Predicted mitochondria 98.3 4.9E-06 1.1E-10 72.6 10.8 90 15-111 52-141 (463)
60 KOG0041 Predicted Ca2+-binding 98.3 2.1E-06 4.7E-11 68.2 7.8 104 4-109 89-196 (244)
61 PF13833 EF-hand_8: EF-hand do 98.3 3E-06 6.4E-11 53.6 6.0 49 30-78 2-52 (54)
62 PF14658 EF-hand_9: EF-hand do 98.2 4.6E-06 9.9E-11 55.0 6.4 61 92-182 2-64 (66)
63 cd00252 SPARC_EC SPARC_EC; ext 98.2 6.3E-06 1.4E-10 60.9 7.7 62 50-116 47-108 (116)
64 cd05030 calgranulins Calgranul 98.2 5.8E-06 1.3E-10 58.0 7.0 67 88-183 8-80 (88)
65 cd05030 calgranulins Calgranul 98.2 8.4E-06 1.8E-10 57.2 7.7 71 11-81 5-81 (88)
66 KOG2643 Ca2+ binding protein, 98.1 7.4E-06 1.6E-10 72.0 7.6 119 29-182 212-346 (489)
67 KOG0031 Myosin regulatory ligh 98.1 4.1E-05 8.9E-10 58.5 9.9 122 52-207 33-161 (171)
68 cd05024 S-100A10 S-100A10: A s 98.1 3E-05 6.6E-10 54.6 8.4 68 11-81 5-78 (91)
69 PF00036 EF-hand_1: EF hand; 98.1 5.1E-06 1.1E-10 46.0 3.3 25 89-113 1-25 (29)
70 KOG0030 Myosin essential light 98.0 7.1E-05 1.5E-09 56.3 9.9 105 50-182 10-116 (152)
71 KOG0751 Mitochondrial aspartat 98.0 6.8E-05 1.5E-09 67.0 11.1 102 6-113 69-204 (694)
72 PF00036 EF-hand_1: EF hand; 97.9 1.5E-05 3.2E-10 44.1 3.5 27 53-79 2-28 (29)
73 PF12763 EF-hand_4: Cytoskelet 97.9 3.5E-05 7.5E-10 55.8 6.2 70 7-80 3-72 (104)
74 KOG0041 Predicted Ca2+-binding 97.9 4.9E-05 1.1E-09 60.6 7.4 66 88-183 99-164 (244)
75 cd05024 S-100A10 S-100A10: A s 97.9 9.7E-05 2.1E-09 52.0 7.8 69 89-183 9-77 (91)
76 PRK12309 transaldolase/EF-hand 97.8 0.00014 3.1E-09 64.4 9.9 60 80-182 326-385 (391)
77 PF14658 EF-hand_9: EF-hand do 97.8 7.6E-05 1.6E-09 49.3 5.3 59 55-113 2-61 (66)
78 KOG1029 Endocytic adaptor prot 97.6 0.0009 2E-08 62.8 12.0 144 3-182 5-257 (1118)
79 PF13405 EF-hand_6: EF-hand do 97.6 7.3E-05 1.6E-09 41.8 3.2 23 89-111 1-23 (31)
80 PF13202 EF-hand_5: EF hand; P 97.5 0.00011 2.4E-09 39.1 2.7 21 91-111 2-22 (25)
81 KOG0169 Phosphoinositide-speci 97.5 0.0027 5.8E-08 59.6 13.4 144 8-182 130-274 (746)
82 KOG0046 Ca2+-binding actin-bun 97.5 0.00045 9.8E-09 62.2 7.7 74 5-81 10-87 (627)
83 PF13202 EF-hand_5: EF hand; P 97.4 0.00019 4.2E-09 38.2 3.1 24 157-180 2-25 (25)
84 KOG4251 Calcium binding protei 97.4 0.0013 2.9E-08 54.2 8.8 136 13-179 197-342 (362)
85 PF12763 EF-hand_4: Cytoskelet 97.3 0.0015 3.2E-08 47.3 7.4 69 84-185 6-74 (104)
86 PRK12309 transaldolase/EF-hand 97.3 0.00074 1.6E-08 59.9 6.9 51 49-113 332-382 (391)
87 KOG4065 Uncharacterized conser 97.2 0.0018 4E-08 47.3 7.1 72 86-179 65-142 (144)
88 PF10591 SPARC_Ca_bdg: Secrete 97.0 0.00055 1.2E-08 50.3 2.7 64 84-179 50-113 (113)
89 PF14788 EF-hand_10: EF hand; 96.9 0.0035 7.6E-08 39.2 5.3 43 132-182 7-49 (51)
90 PF13405 EF-hand_6: EF-hand do 96.9 0.0016 3.4E-08 36.3 3.4 26 16-43 2-27 (31)
91 PF09069 EF-hand_3: EF-hand; 96.9 0.008 1.7E-07 42.2 7.5 82 87-190 2-83 (90)
92 PF14788 EF-hand_10: EF hand; 96.8 0.0058 1.2E-07 38.2 5.7 44 68-112 2-45 (51)
93 KOG0377 Protein serine/threoni 96.7 0.0061 1.3E-07 54.2 7.5 58 53-110 549-609 (631)
94 KOG4347 GTPase-activating prot 96.7 0.0093 2E-07 55.2 8.5 106 2-109 492-611 (671)
95 PF10591 SPARC_Ca_bdg: Secrete 96.6 0.0019 4.2E-08 47.4 2.9 65 45-112 48-112 (113)
96 KOG0040 Ca2+-binding actin-bun 96.6 0.0048 1E-07 61.7 6.3 70 89-184 2254-2326(2399)
97 KOG2562 Protein phosphatase 2 96.4 0.028 6E-07 50.3 9.3 93 17-111 177-301 (493)
98 smart00054 EFh EF-hand, calciu 96.0 0.011 2.4E-07 30.6 3.3 26 157-182 3-28 (29)
99 PF09279 EF-hand_like: Phospho 96.0 0.027 5.9E-07 38.6 6.0 69 90-183 2-70 (83)
100 KOG0046 Ca2+-binding actin-bun 95.9 0.026 5.5E-07 51.3 7.0 66 88-181 19-84 (627)
101 smart00054 EFh EF-hand, calciu 95.5 0.015 3.3E-07 30.1 2.6 24 90-113 2-25 (29)
102 KOG4578 Uncharacterized conser 95.5 0.0085 1.8E-07 51.3 2.2 70 87-185 332-401 (421)
103 PLN02952 phosphoinositide phos 95.3 0.18 3.9E-06 47.2 10.2 95 64-183 13-111 (599)
104 PF09279 EF-hand_like: Phospho 94.3 0.12 2.6E-06 35.3 5.0 57 53-110 2-63 (83)
105 KOG4065 Uncharacterized conser 94.2 0.23 5E-06 36.5 6.5 66 6-75 61-141 (144)
106 KOG4666 Predicted phosphate ac 93.4 0.24 5.2E-06 42.7 6.2 96 14-113 259-356 (412)
107 KOG0039 Ferric reductase, NADH 93.0 0.28 6.1E-06 46.6 6.7 96 65-190 2-97 (646)
108 KOG1955 Ral-GTPase effector RA 93.0 0.32 7E-06 44.1 6.6 76 2-80 219-294 (737)
109 KOG1707 Predicted Ras related/ 92.9 1.2 2.7E-05 41.3 10.4 155 4-187 185-348 (625)
110 KOG0169 Phosphoinositide-speci 92.6 1.5 3.3E-05 41.8 10.7 121 49-186 134-254 (746)
111 KOG3866 DNA-binding protein of 92.1 0.38 8.3E-06 41.2 5.6 72 90-182 246-324 (442)
112 KOG3555 Ca2+-binding proteogly 91.8 0.5 1.1E-05 41.0 6.1 104 6-116 199-310 (434)
113 KOG0035 Ca2+-binding actin-bun 91.6 1 2.3E-05 43.8 8.6 102 6-110 739-846 (890)
114 KOG1029 Endocytic adaptor prot 91.4 0.33 7.2E-06 46.3 4.9 72 5-79 186-257 (1118)
115 PF05042 Caleosin: Caleosin re 91.0 0.84 1.8E-05 35.9 6.1 41 155-195 97-137 (174)
116 KOG3555 Ca2+-binding proteogly 90.3 0.46 1E-05 41.3 4.5 65 85-183 247-311 (434)
117 KOG1265 Phospholipase C [Lipid 89.5 4.4 9.5E-05 39.6 10.6 125 29-182 161-299 (1189)
118 PF05042 Caleosin: Caleosin re 89.3 6.1 0.00013 31.1 9.7 63 53-116 98-166 (174)
119 PF05517 p25-alpha: p25-alpha 89.2 2.3 4.9E-05 32.9 7.2 67 13-81 1-71 (154)
120 KOG4578 Uncharacterized conser 88.3 0.43 9.4E-06 41.2 2.9 57 53-109 335-391 (421)
121 KOG0042 Glycerol-3-phosphate d 88.0 1.9 4E-05 40.1 6.8 81 5-87 584-665 (680)
122 KOG4286 Dystrophin-like protei 86.3 7.8 0.00017 37.2 10.0 150 15-189 421-587 (966)
123 KOG1955 Ral-GTPase effector RA 85.0 2.5 5.4E-05 38.7 5.9 64 86-181 229-292 (737)
124 KOG4347 GTPase-activating prot 84.9 2.1 4.7E-05 40.1 5.7 78 68-176 535-612 (671)
125 KOG0998 Synaptic vesicle prote 84.6 1.5 3.2E-05 43.0 4.8 71 5-79 120-190 (847)
126 PF08726 EFhand_Ca_insen: Ca2+ 81.4 0.96 2.1E-05 30.1 1.5 23 86-109 4-26 (69)
127 PF08414 NADPH_Ox: Respiratory 80.3 3.7 8.1E-05 29.3 4.2 64 12-81 28-94 (100)
128 KOG4301 Beta-dystrobrevin [Cyt 79.8 13 0.00029 32.4 8.2 112 54-194 113-227 (434)
129 KOG2243 Ca2+ release channel ( 79.2 3.7 8.1E-05 42.1 5.2 59 93-182 4062-4120(5019)
130 KOG0042 Glycerol-3-phosphate d 79.1 3.5 7.7E-05 38.3 4.8 64 89-182 594-657 (680)
131 PF04876 Tenui_NCP: Tenuivirus 79.1 12 0.00026 28.7 6.9 78 100-194 95-172 (175)
132 PF09068 EF-hand_2: EF hand; 78.9 7.6 0.00016 29.0 5.8 23 89-111 98-120 (127)
133 PF14513 DAG_kinase_N: Diacylg 77.0 5.4 0.00012 30.3 4.6 70 31-101 6-82 (138)
134 cd07313 terB_like_2 tellurium 71.9 12 0.00025 26.3 5.1 79 29-109 12-93 (104)
135 KOG1707 Predicted Ras related/ 71.4 11 0.00023 35.4 5.8 94 5-102 306-400 (625)
136 PLN02952 phosphoinositide phos 70.0 37 0.00081 32.1 9.2 87 29-116 13-110 (599)
137 PLN02230 phosphoinositide phos 68.2 26 0.00057 33.1 7.8 75 85-183 26-103 (598)
138 PF08726 EFhand_Ca_insen: Ca2+ 68.0 9.4 0.0002 25.4 3.6 57 14-75 6-65 (69)
139 PF12174 RST: RCD1-SRO-TAF4 (R 67.7 11 0.00024 25.1 3.9 45 65-113 6-50 (70)
140 PF05517 p25-alpha: p25-alpha 67.5 28 0.0006 26.8 6.7 63 93-182 7-69 (154)
141 KOG2243 Ca2+ release channel ( 65.4 9.6 0.00021 39.4 4.4 58 19-78 4062-4119(5019)
142 PF01023 S_100: S-100/ICaBP ty 65.2 21 0.00045 21.4 4.4 33 11-43 3-35 (44)
143 PLN02223 phosphoinositide phos 65.2 33 0.00071 32.0 7.7 75 85-182 13-92 (537)
144 KOG4004 Matricellular protein 63.4 4 8.7E-05 33.0 1.3 54 56-112 192-246 (259)
145 KOG0035 Ca2+-binding actin-bun 61.8 23 0.0005 34.9 6.2 73 87-185 746-819 (890)
146 PF09068 EF-hand_2: EF hand; 60.9 52 0.0011 24.5 6.9 75 88-180 41-123 (127)
147 KOG3866 DNA-binding protein of 58.2 33 0.00071 29.8 5.9 92 9-109 225-347 (442)
148 KOG2557 Uncharacterized conser 56.8 95 0.0021 27.6 8.6 59 54-113 60-119 (427)
149 PF00404 Dockerin_1: Dockerin 53.7 22 0.00047 17.9 2.6 13 98-110 1-13 (21)
150 PLN02228 Phosphoinositide phos 53.4 51 0.0011 31.0 6.9 70 84-183 20-93 (567)
151 KOG3442 Uncharacterized conser 52.4 24 0.00052 26.2 3.7 46 100-172 51-96 (132)
152 PF12174 RST: RCD1-SRO-TAF4 (R 51.1 12 0.00027 24.9 1.9 34 145-182 20-53 (70)
153 KOG4004 Matricellular protein 51.0 7.3 0.00016 31.5 0.9 57 20-78 193-249 (259)
154 cd07313 terB_like_2 tellurium 49.9 57 0.0012 22.7 5.4 45 65-109 13-58 (104)
155 PF00427 PBS_linker_poly: Phyc 49.3 84 0.0018 23.6 6.3 39 168-206 42-82 (131)
156 PLN02222 phosphoinositide phos 48.8 61 0.0013 30.6 6.7 70 85-183 22-91 (581)
157 PRK09430 djlA Dna-J like membr 47.2 1.7E+02 0.0037 24.6 11.2 77 29-109 68-150 (267)
158 PF13720 Acetyltransf_11: Udp 40.9 94 0.002 21.2 5.1 52 6-63 26-77 (83)
159 PF14513 DAG_kinase_N: Diacylg 40.7 14 0.00029 28.1 0.9 58 3-64 17-82 (138)
160 KOG0998 Synaptic vesicle prote 40.2 22 0.00048 35.1 2.5 72 7-81 276-347 (847)
161 PLN02228 Phosphoinositide phos 39.3 1.2E+02 0.0026 28.6 7.0 66 49-116 22-92 (567)
162 TIGR01848 PHA_reg_PhaR polyhyd 36.6 88 0.0019 22.6 4.5 18 95-112 10-27 (107)
163 COG3793 TerB Tellurite resista 35.0 1.3E+02 0.0028 23.0 5.4 67 101-189 37-105 (144)
164 KOG0506 Glutaminase (contains 34.9 1.2E+02 0.0027 28.0 6.1 93 89-210 87-184 (622)
165 COG4103 Uncharacterized protei 34.7 2.1E+02 0.0045 21.9 7.2 86 18-109 34-122 (148)
166 cd02977 ArsC_family Arsenate R 34.5 72 0.0016 22.3 3.9 30 159-188 62-91 (105)
167 KOG2419 Phosphatidylserine dec 34.4 41 0.00089 32.1 3.1 67 50-116 436-533 (975)
168 PLN02222 phosphoinositide phos 34.4 1.3E+02 0.0027 28.6 6.4 66 7-79 21-90 (581)
169 PF08414 NADPH_Ox: Respiratory 33.0 1.8E+02 0.004 20.7 6.6 60 90-181 32-91 (100)
170 cd03035 ArsC_Yffb Arsenate Red 32.7 53 0.0011 23.4 2.9 31 159-189 60-90 (105)
171 cd07176 terB tellurite resista 30.8 96 0.0021 21.5 4.1 79 29-109 15-98 (111)
172 KOG4403 Cell surface glycoprot 29.8 83 0.0018 28.6 4.1 47 63-109 40-89 (575)
173 PF03960 ArsC: ArsC family; I 29.7 56 0.0012 23.2 2.7 29 161-189 61-89 (110)
174 TIGR02675 tape_meas_nterm tape 28.9 1E+02 0.0022 20.5 3.7 16 101-116 27-42 (75)
175 PF08976 DUF1880: Domain of un 28.5 57 0.0012 24.0 2.5 34 146-183 3-36 (118)
176 PF09851 SHOCT: Short C-termin 28.5 1.1E+02 0.0023 16.7 3.1 23 11-41 3-25 (31)
177 TIGR01848 PHA_reg_PhaR polyhyd 28.3 2.2E+02 0.0047 20.7 5.3 41 58-109 10-50 (107)
178 KOG3449 60S acidic ribosomal p 28.0 1.8E+02 0.0039 21.2 4.9 54 90-178 3-56 (112)
179 cd03032 ArsC_Spx Arsenate Redu 26.6 1.8E+02 0.004 20.7 5.0 30 159-189 63-92 (115)
180 KOG1264 Phospholipase C [Lipid 26.6 6.3E+02 0.014 25.4 9.5 73 6-81 135-210 (1267)
181 PF07879 PHB_acc_N: PHB/PHA ac 25.9 57 0.0012 21.3 1.9 17 95-111 10-26 (64)
182 PRK13344 spxA transcriptional 24.8 2E+02 0.0043 21.4 4.9 29 160-189 64-92 (132)
183 PF07105 DUF1367: Protein of u 24.4 2.8E+02 0.006 22.4 5.9 80 88-190 52-135 (196)
184 PTZ00373 60S Acidic ribosomal 24.2 2.2E+02 0.0048 20.8 4.9 40 91-156 6-45 (112)
185 PRK03095 prsA peptidylprolyl i 24.2 4.4E+02 0.0095 22.2 8.4 73 101-183 31-109 (287)
186 PF05872 DUF853: Bacterial pro 24.1 5E+02 0.011 24.1 8.1 120 50-204 127-248 (502)
187 PRK10026 arsenate reductase; P 23.8 1.3E+02 0.0028 22.8 3.8 31 158-189 64-94 (141)
188 cd03034 ArsC_ArsC Arsenate Red 23.8 1.6E+02 0.0035 21.0 4.2 29 160-189 63-91 (112)
189 PLN02230 phosphoinositide phos 23.7 3.2E+02 0.0069 26.1 7.0 67 49-116 27-102 (598)
190 PF14003 YlbE: YlbE-like prote 23.3 66 0.0014 21.1 1.8 35 174-208 12-46 (65)
191 KOG4070 Putative signal transd 23.1 3.1E+02 0.0068 21.3 5.7 87 11-98 12-108 (180)
192 cd07177 terB_like tellurium re 22.8 1.5E+02 0.0033 19.9 3.8 79 29-109 12-93 (104)
193 PF09373 PMBR: Pseudomurein-bi 22.7 1.2E+02 0.0027 16.6 2.7 16 101-116 1-16 (33)
194 TIGR00014 arsC arsenate reduct 22.7 1.3E+02 0.0028 21.6 3.5 30 159-189 63-92 (114)
195 PF04282 DUF438: Family of unk 22.2 2.3E+02 0.005 18.9 4.3 20 168-188 44-63 (71)
196 KOG1265 Phospholipase C [Lipid 21.9 5.6E+02 0.012 25.9 8.3 71 49-119 219-302 (1189)
197 PRK12461 UDP-N-acetylglucosami 21.9 3E+02 0.0065 22.9 6.0 57 4-66 196-252 (255)
198 cd05833 Ribosomal_P2 Ribosomal 21.3 2.7E+02 0.0058 20.2 4.9 40 91-156 4-43 (109)
199 PRK03002 prsA peptidylprolyl i 21.1 5E+02 0.011 21.8 8.3 73 101-182 34-112 (285)
200 PF03979 Sigma70_r1_1: Sigma-7 20.3 1.2E+02 0.0027 20.3 2.8 28 101-156 18-45 (82)
201 PF04157 EAP30: EAP30/Vps36 fa 20.1 3.7E+02 0.0079 21.7 6.1 20 90-109 176-195 (223)
No 1
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=99.93 E-value=1.8e-24 Score=171.75 Aligned_cols=161 Identities=47% Similarity=0.777 Sum_probs=144.3
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccccchHHHHHHHhhhcCCCCcc-ccHHHHHHHHHhhCCCCc
Q 048069 7 AVTVNEVEALYDLFKKLSSSIIDDGLIHKEEFQLALLRNSSKQNLFADRIFDLFDVKRNGV-IEFGEFVRSLSIFHPSAP 85 (213)
Q Consensus 7 ~~s~~~i~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~-I~f~ef~~~~~~~~~~~~ 85 (213)
.||..||..|+.+|.+++.+. ++|+|+.+||..+. ....+++..++++.++.+++|. |+|++|+.+++.+.+...
T Consensus 26 ~fs~~EI~~L~~rF~kl~~~~-~~g~lt~eef~~i~---~~~~Np~~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~~ 101 (187)
T KOG0034|consen 26 QFSANEIERLYERFKKLDRNN-GDGYLTKEEFLSIP---ELALNPLADRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKAS 101 (187)
T ss_pred ccCHHHHHHHHHHHHHhcccc-ccCccCHHHHHHHH---HHhcCcHHHHHHHHHhccCCCCccCHHHHHHHHhhhcCCcc
Confidence 399999999999999999875 78999999999776 4567888999999999998888 999999999999998888
Q ss_pred hHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHhCC
Q 048069 86 EAEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEADI 165 (213)
Q Consensus 86 ~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D~ 165 (213)
.+++++++|++||.+++|+|+.+| +.+++..+....... +++.++.+++.+|.++|.
T Consensus 102 ~~~Kl~faF~vYD~~~~G~I~ree----------------------l~~iv~~~~~~~~~~-~~e~~~~i~d~t~~e~D~ 158 (187)
T KOG0034|consen 102 KREKLRFAFRVYDLDGDGFISREE----------------------LKQILRMMVGENDDM-SDEQLEDIVDKTFEEADT 158 (187)
T ss_pred HHHHHHHHHHHhcCCCCCcCcHHH----------------------HHHHHHHHHccCCcc-hHHHHHHHHHHHHHHhCC
Confidence 888999999999999999999999 777777665433222 589999999999999999
Q ss_pred CCCCcccHHHHHHHHhhChhHHhhcccch
Q 048069 166 KGDGKIDLEEWTEFAGRNPTILKSMTLPY 194 (213)
Q Consensus 166 ~~dg~It~~ef~~~l~~~~~~~~~~~~~~ 194 (213)
++||+|+++||.+++.+.|.+.+.|++++
T Consensus 159 d~DG~IsfeEf~~~v~~~P~~~~~m~~~~ 187 (187)
T KOG0034|consen 159 DGDGKISFEEFCKVVEKQPDLLEKMTIRF 187 (187)
T ss_pred CCCCcCcHHHHHHHHHcCccHHHHcCCCC
Confidence 99999999999999999999999998764
No 2
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.92 E-value=1.1e-23 Score=162.48 Aligned_cols=150 Identities=30% Similarity=0.494 Sum_probs=136.9
Q ss_pred CccCCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhcccc-chHHHHHHHhhhcCCCCccccHHHHHHHHHhhC
Q 048069 3 SDFWAVTVNEVEALYDLFKKLSSSIIDDGLIHKEEFQLALLRNSSK-QNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFH 81 (213)
Q Consensus 3 ~~~~~~s~~~i~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~ 81 (213)
...+.|+.++++++++.|..+|++ ++|.|+..+|..++..++.. ++.++.+|+..+|. +.+.|+|.+|+.++....
T Consensus 9 ~~~~~~t~~qi~~lkeaF~l~D~d--~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~ 85 (160)
T COG5126 9 LTFTQLTEEQIQELKEAFQLFDRD--SDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKL 85 (160)
T ss_pred hhcccCCHHHHHHHHHHHHHhCcC--CCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHh
Confidence 456889999999999999999999 99999999999998776644 77889999999999 899999999999999988
Q ss_pred CCCchHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHH
Q 048069 82 PSAPEAEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMM 161 (213)
Q Consensus 82 ~~~~~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~ 161 (213)
.....+++++.+|+.||+|++|+|+..+ +..++..+ |..+++++++.++ .
T Consensus 86 ~~~~~~Eel~~aF~~fD~d~dG~Is~~e----------------------L~~vl~~l----ge~~~deev~~ll----~ 135 (160)
T COG5126 86 KRGDKEEELREAFKLFDKDHDGYISIGE----------------------LRRVLKSL----GERLSDEEVEKLL----K 135 (160)
T ss_pred ccCCcHHHHHHHHHHhCCCCCceecHHH----------------------HHHHHHhh----cccCCHHHHHHHH----H
Confidence 7788899999999999999999999999 77777766 8999999997776 9
Q ss_pred HhCCCCCCcccHHHHHHHHhhChh
Q 048069 162 EADIKGDGKIDLEEWTEFAGRNPT 185 (213)
Q Consensus 162 ~~D~~~dg~It~~ef~~~l~~~~~ 185 (213)
.+|.+++|.|+|++|.+.+...|.
T Consensus 136 ~~d~d~dG~i~~~eF~~~~~~~~~ 159 (160)
T COG5126 136 EYDEDGDGEIDYEEFKKLIKDSPT 159 (160)
T ss_pred hcCCCCCceEeHHHHHHHHhccCC
Confidence 999999999999999999887764
No 3
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.90 E-value=6.4e-23 Score=163.16 Aligned_cols=166 Identities=31% Similarity=0.504 Sum_probs=141.4
Q ss_pred CccCCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhcc--ccchHHHHHHHhhhcCCCCccccHHHHHHHHHhh
Q 048069 3 SDFWAVTVNEVEALYDLFKKLSSSIIDDGLIHKEEFQLALLRNS--SKQNLFADRIFDLFDVKRNGVIEFGEFVRSLSIF 80 (213)
Q Consensus 3 ~~~~~~s~~~i~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~~~--~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~ 80 (213)
.+.+.+++++++.++.-|..-. .+|.++.++|+.++.... ..+...++.+|+.+|.+++|.|+|.||+.+++..
T Consensus 18 ~~~t~f~~~ei~~~Yr~Fk~~c----P~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~ 93 (193)
T KOG0044|consen 18 VQQTKFSKKEIQQWYRGFKNEC----PSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFLEFICALSLT 93 (193)
T ss_pred HHhcCCCHHHHHHHHHHhcccC----CCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHH
Confidence 4578899999999999999876 789999999998875533 4577788999999999999999999999999999
Q ss_pred CCCCchHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHH
Q 048069 81 HPSAPEAEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTM 160 (213)
Q Consensus 81 ~~~~~~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f 160 (213)
. .+..+++++++|++||.||+|+|+.+|+..+++. +..+... ...+ ......++.++.+|
T Consensus 94 ~-rGt~eekl~w~F~lyD~dgdG~It~~Eml~iv~~---------------i~~m~~~---~~~~-~~~~~~~~~v~~if 153 (193)
T KOG0044|consen 94 S-RGTLEEKLKWAFRLYDLDGDGYITKEEMLKIVQA---------------IYQMTGS---KALP-EDEETPEERVDKIF 153 (193)
T ss_pred c-CCcHHHHhhhhheeecCCCCceEcHHHHHHHHHH---------------HHHHccc---ccCC-cccccHHHHHHHHH
Confidence 9 4899999999999999999999999998777555 4443321 1112 44566777789999
Q ss_pred HHhCCCCCCcccHHHHHHHHhhChhHHhhccc
Q 048069 161 MEADIKGDGKIDLEEWTEFAGRNPTILKSMTL 192 (213)
Q Consensus 161 ~~~D~~~dg~It~~ef~~~l~~~~~~~~~~~~ 192 (213)
+.+|.|+||.||++||...+..+|.+++.++.
T Consensus 154 ~k~D~n~Dg~lT~eef~~~~~~d~~i~~~l~~ 185 (193)
T KOG0044|consen 154 SKMDKNKDGKLTLEEFIEGCKADPSILRALEQ 185 (193)
T ss_pred HHcCCCCCCcccHHHHHHHhhhCHHHHHHhhh
Confidence 99999999999999999999999999998854
No 4
>PTZ00183 centrin; Provisional
Probab=99.85 E-value=8.8e-20 Score=140.74 Aligned_cols=151 Identities=24% Similarity=0.339 Sum_probs=130.0
Q ss_pred CccCCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccc-cchHHHHHHHhhhcCCCCccccHHHHHHHHHhhC
Q 048069 3 SDFWAVTVNEVEALYDLFKKLSSSIIDDGLIHKEEFQLALLRNSS-KQNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFH 81 (213)
Q Consensus 3 ~~~~~~s~~~i~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~~~~-~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~ 81 (213)
.....+++.+++.+...|..+|.+ ++|.|+..+|..++...+. .....+..++..+|.+++|.|+|.||+.++....
T Consensus 6 ~~~~~~~~~~~~~~~~~F~~~D~~--~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~ 83 (158)
T PTZ00183 6 SERPGLTEDQKKEIREAFDLFDTD--GSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKL 83 (158)
T ss_pred cccCCCCHHHHHHHHHHHHHhCCC--CCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHh
Confidence 456679999999999999999999 9999999999988876553 3455689999999999999999999999887765
Q ss_pred CCCchHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHH
Q 048069 82 PSAPEAEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMM 161 (213)
Q Consensus 82 ~~~~~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~ 161 (213)
......+.++.+|+.+|.+++|+|+.+| +..++..+ +..+++.++. .+|.
T Consensus 84 ~~~~~~~~l~~~F~~~D~~~~G~i~~~e----------------------~~~~l~~~----~~~l~~~~~~----~~~~ 133 (158)
T PTZ00183 84 GERDPREEILKAFRLFDDDKTGKISLKN----------------------LKRVAKEL----GETITDEELQ----EMID 133 (158)
T ss_pred cCCCcHHHHHHHHHHhCCCCCCcCcHHH----------------------HHHHHHHh----CCCCCHHHHH----HHHH
Confidence 4556678899999999999999999999 66666655 6778887774 4559
Q ss_pred HhCCCCCCcccHHHHHHHHhhChh
Q 048069 162 EADIKGDGKIDLEEWTEFAGRNPT 185 (213)
Q Consensus 162 ~~D~~~dg~It~~ef~~~l~~~~~ 185 (213)
.+|.+++|.|++++|..++...|.
T Consensus 134 ~~d~~~~g~i~~~ef~~~~~~~~~ 157 (158)
T PTZ00183 134 EADRNGDGEISEEEFYRIMKKTNL 157 (158)
T ss_pred HhCCCCCCcCcHHHHHHHHhcccC
Confidence 999999999999999999999884
No 5
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.85 E-value=7.3e-20 Score=141.52 Aligned_cols=143 Identities=26% Similarity=0.490 Sum_probs=125.5
Q ss_pred CCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhcccc-chHHHHHHHhhhcCCCCccccHHHHHHHHHhhCCCCch
Q 048069 8 VTVNEVEALYDLFKKLSSSIIDDGLIHKEEFQLALLRNSSK-QNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFHPSAPE 86 (213)
Q Consensus 8 ~s~~~i~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~ 86 (213)
++..++..+..+|..+|.+ ++|+|+..++..++..++.. ....+..++..+|.+++|.|+|++|+.++.........
T Consensus 2 ~~~~~~~el~~~F~~fD~d--~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~ 79 (151)
T KOG0027|consen 2 LSEEQILELKEAFQLFDKD--GDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTD 79 (151)
T ss_pred CCHHHHHHHHHHHHHHCCC--CCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhccccc
Confidence 5778899999999999999 99999999999999887765 56677999999999999999999999999876543333
Q ss_pred ----HHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHH
Q 048069 87 ----AEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMME 162 (213)
Q Consensus 87 ----~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~ 162 (213)
.+.++.+|+.||++++|+||.+| |++++..+ |.+.+.+.++.++ +.
T Consensus 80 ~~~~~~el~eaF~~fD~d~~G~Is~~e----------------------l~~~l~~l----g~~~~~~e~~~mi----~~ 129 (151)
T KOG0027|consen 80 EEASSEELKEAFRVFDKDGDGFISASE----------------------LKKVLTSL----GEKLTDEECKEMI----RE 129 (151)
T ss_pred ccccHHHHHHHHHHHccCCCCcCcHHH----------------------HHHHHHHh----CCcCCHHHHHHHH----Hh
Confidence 45999999999999999999999 88888877 8888877775555 99
Q ss_pred hCCCCCCcccHHHHHHHHhh
Q 048069 163 ADIKGDGKIDLEEWTEFAGR 182 (213)
Q Consensus 163 ~D~~~dg~It~~ef~~~l~~ 182 (213)
.|.|+||.|+|++|++++..
T Consensus 130 ~d~d~dg~i~f~ef~~~m~~ 149 (151)
T KOG0027|consen 130 VDVDGDGKVNFEEFVKMMSG 149 (151)
T ss_pred cCCCCCCeEeHHHHHHHHhc
Confidence 99999999999999999865
No 6
>PTZ00184 calmodulin; Provisional
Probab=99.82 E-value=1.7e-18 Score=131.82 Aligned_cols=145 Identities=25% Similarity=0.440 Sum_probs=123.3
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccc-cchHHHHHHHhhhcCCCCccccHHHHHHHHHhhCCCC
Q 048069 6 WAVTVNEVEALYDLFKKLSSSIIDDGLIHKEEFQLALLRNSS-KQNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFHPSA 84 (213)
Q Consensus 6 ~~~s~~~i~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~~~~-~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~ 84 (213)
..+++.+++.+...|..+|.+ ++|.|+.++|..++...+. .....+..++..+|.+++|.|+|++|+.++.......
T Consensus 3 ~~~~~~~~~~~~~~F~~~D~~--~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~ 80 (149)
T PTZ00184 3 DQLTEEQIAEFKEAFSLFDKD--GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKDT 80 (149)
T ss_pred CccCHHHHHHHHHHHHHHcCC--CCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCC
Confidence 457899999999999999999 9999999999988755443 3455789999999999999999999999988765555
Q ss_pred chHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHhC
Q 048069 85 PEAEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEAD 164 (213)
Q Consensus 85 ~~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D 164 (213)
...+.+..+|+.+|.+++|+|+.+| +.+++..+ +..++.+.++. +|..+|
T Consensus 81 ~~~~~~~~~F~~~D~~~~g~i~~~e----------------------~~~~l~~~----~~~~~~~~~~~----~~~~~d 130 (149)
T PTZ00184 81 DSEEEIKEAFKVFDRDGNGFISAAE----------------------LRHVMTNL----GEKLTDEEVDE----MIREAD 130 (149)
T ss_pred cHHHHHHHHHHhhCCCCCCeEeHHH----------------------HHHHHHHH----CCCCCHHHHHH----HHHhcC
Confidence 6778899999999999999999999 77766554 66777776644 458999
Q ss_pred CCCCCcccHHHHHHHHhh
Q 048069 165 IKGDGKIDLEEWTEFAGR 182 (213)
Q Consensus 165 ~~~dg~It~~ef~~~l~~ 182 (213)
.+++|.|+++||+.++..
T Consensus 131 ~~~~g~i~~~ef~~~~~~ 148 (149)
T PTZ00184 131 VDGDGQINYEEFVKMMMS 148 (149)
T ss_pred CCCCCcCcHHHHHHHHhc
Confidence 999999999999998764
No 7
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=99.78 E-value=1e-17 Score=127.43 Aligned_cols=147 Identities=24% Similarity=0.358 Sum_probs=131.4
Q ss_pred cCCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhcccc-chHHHHHHHhhhcCCCCccccHHHHHHHHHhhCCC
Q 048069 5 FWAVTVNEVEALYDLFKKLSSSIIDDGLIHKEEFQLALLRNSSK-QNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFHPS 83 (213)
Q Consensus 5 ~~~~s~~~i~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~ 83 (213)
...+++.+-+.++..|..+|++ ++|+|+..+|+.++..++.. ....+.++..-+|.++.|.|+|++|+..+......
T Consensus 24 ~~~l~~~q~q~i~e~f~lfd~~--~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e 101 (172)
T KOG0028|consen 24 KSELTEEQKQEIKEAFELFDPD--MAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLGE 101 (172)
T ss_pred CccccHHHHhhHHHHHHhhccC--CCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHhc
Confidence 4567888889999999999999 99999999998899888876 45567889999999999999999999998776555
Q ss_pred CchHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHh
Q 048069 84 APEAEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEA 163 (213)
Q Consensus 84 ~~~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~ 163 (213)
..+.+.++.+|+.+|.|++|.|+..+ |+.+...+ |+.++++++.++| .++
T Consensus 102 ~dt~eEi~~afrl~D~D~~Gkis~~~----------------------lkrvakeL----genltD~El~eMI----eEA 151 (172)
T KOG0028|consen 102 RDTKEEIKKAFRLFDDDKTGKISQRN----------------------LKRVAKEL----GENLTDEELMEMI----EEA 151 (172)
T ss_pred cCcHHHHHHHHHcccccCCCCcCHHH----------------------HHHHHHHh----CccccHHHHHHHH----HHh
Confidence 67899999999999999999999999 77777666 8999999998888 999
Q ss_pred CCCCCCcccHHHHHHHHhhC
Q 048069 164 DIKGDGKIDLEEWTEFAGRN 183 (213)
Q Consensus 164 D~~~dg~It~~ef~~~l~~~ 183 (213)
|.++||.|+.+||..+|++.
T Consensus 152 d~d~dgevneeEF~~imk~t 171 (172)
T KOG0028|consen 152 DRDGDGEVNEEEFIRIMKKT 171 (172)
T ss_pred cccccccccHHHHHHHHhcC
Confidence 99999999999999998764
No 8
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.72 E-value=9.9e-17 Score=127.91 Aligned_cols=158 Identities=22% Similarity=0.339 Sum_probs=135.3
Q ss_pred HHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhcccc--chHHHHHHHhhhcCCCCccccHHHHHHHHHhhCCCCchHHHH
Q 048069 13 VEALYDLFKKLSSSIIDDGLIHKEEFQLALLRNSSK--QNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFHPSAPEAEKI 90 (213)
Q Consensus 13 i~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~~~~~--~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~ 90 (213)
-..+...|...|.+ ++|.|+.+|++.+|...... ....|..|+.++|.+.+|+|+|+||..++..+. .|
T Consensus 56 ~~~~~~~f~~vD~d--~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~i~-------~W 126 (221)
T KOG0037|consen 56 FPQLAGWFQSVDRD--RSGRILAKELQQALSNGTWSPFSIETCRLMISMFDRDNSGTIGFKEFKALWKYIN-------QW 126 (221)
T ss_pred cHHHHHHHHhhCcc--ccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHH-------HH
Confidence 44788999999999 99999999999888422222 566789999999999999999999999999886 49
Q ss_pred HHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHhCCCCCCc
Q 048069 91 TFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEADIKGDGK 170 (213)
Q Consensus 91 ~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dg~ 170 (213)
+.+|+.||.|+.|.|+..| |++++..+ |..+++...+-++ +.+|..++|.
T Consensus 127 r~vF~~~D~D~SG~I~~sE----------------------L~~Al~~~----Gy~Lspq~~~~lv----~kyd~~~~g~ 176 (221)
T KOG0037|consen 127 RNVFRTYDRDRSGTIDSSE----------------------LRQALTQL----GYRLSPQFYNLLV----RKYDRFGGGR 176 (221)
T ss_pred HHHHHhcccCCCCcccHHH----------------------HHHHHHHc----CcCCCHHHHHHHH----HHhccccCCc
Confidence 9999999999999999999 99999888 9999998886666 9999887999
Q ss_pred ccHHHHHHHHhhChhHHhhc---ccchhHHHHhhhhhhHhhh
Q 048069 171 IDLEEWTEFAGRNPTILKSM---TLPYLKEITLAFPSFVLHS 209 (213)
Q Consensus 171 It~~ef~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 209 (213)
|.+++|++++...+.+.+.+ .....+.|+..|-.|+++.
T Consensus 177 i~FD~FI~ccv~L~~lt~~Fr~~D~~q~G~i~~~y~dfl~~t 218 (221)
T KOG0037|consen 177 IDFDDFIQCCVVLQRLTEAFRRRDTAQQGSITISYDDFLQMT 218 (221)
T ss_pred eeHHHHHHHHHHHHHHHHHHHHhccccceeEEEeHHHHHHHh
Confidence 99999999998877665544 6666777888888888764
No 9
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=99.68 E-value=1.4e-15 Score=114.25 Aligned_cols=161 Identities=29% Similarity=0.496 Sum_probs=133.9
Q ss_pred ccCCCCHHHHHHHHHHHHhhcCCC------CCCC---cccHHHHHHHHhhccccchHHHHHHHhhhcCCCCccccHHHHH
Q 048069 4 DFWAVTVNEVEALYDLFKKLSSSI------IDDG---LIHKEEFQLALLRNSSKQNLFADRIFDLFDVKRNGVIEFGEFV 74 (213)
Q Consensus 4 ~~~~~s~~~i~~l~~~F~~~d~~~------~~~g---~is~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~I~f~ef~ 74 (213)
+-+-||.++|.+++..|..+.++- .+.. .+..+.+. .-+..+.+++-+++-+.|..|+.|.++|++|+
T Consensus 18 DCTFFtrKdIlrl~~Rf~~L~P~lVP~~~~~~~~~~v~vp~e~i~---kMPELkenpfk~ri~e~FSeDG~GnlsfddFl 94 (189)
T KOG0038|consen 18 DCTFFTRKDILRLHKRFYELAPHLVPTDMTGNRPPIVKVPFELIE---KMPELKENPFKRRICEVFSEDGRGNLSFDDFL 94 (189)
T ss_pred ccccccHHHHHHHHHHHHHhCcccccccccCCCCCceeecHHHHh---hChhhhcChHHHHHHHHhccCCCCcccHHHHH
Confidence 446689999999999999987762 1111 23333322 22345567888999999999999999999999
Q ss_pred HHHHhhCCCCchHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHH
Q 048069 75 RSLSIFHPSAPEAEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVES 154 (213)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 154 (213)
++++.++...+..-++..+|++||-|+++.|..++ |...++++. ..++++++++.
T Consensus 95 DmfSV~sE~APrdlK~~YAFkIYDfd~D~~i~~~D----------------------L~~~l~~lT---r~eLs~eEv~~ 149 (189)
T KOG0038|consen 95 DMFSVFSEMAPRDLKAKYAFKIYDFDGDEFIGHDD----------------------LEKTLTSLT---RDELSDEEVEL 149 (189)
T ss_pred HHHHHHHhhChHHhhhhheeEEeecCCCCcccHHH----------------------HHHHHHHHh---hccCCHHHHHH
Confidence 99999987777788999999999999999999999 777777664 46899999999
Q ss_pred HHHHHHHHhCCCCCCcccHHHHHHHHhhChhHHhhccc
Q 048069 155 IVDKTMMEADIKGDGKIDLEEWTEFAGRNPTILKSMTL 192 (213)
Q Consensus 155 ~~~~~f~~~D~~~dg~It~~ef~~~l~~~~~~~~~~~~ 192 (213)
+++.+..+.|.++||++++.||..++.+.|+++..+..
T Consensus 150 i~ekvieEAD~DgDgkl~~~eFe~~i~raPDFlsTFHI 187 (189)
T KOG0038|consen 150 ICEKVIEEADLDGDGKLSFAEFEHVILRAPDFLSTFHI 187 (189)
T ss_pred HHHHHHHHhcCCCCCcccHHHHHHHHHhCcchHhhhee
Confidence 99999999999999999999999999999999876643
No 10
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=99.67 E-value=5.8e-15 Score=111.72 Aligned_cols=140 Identities=21% Similarity=0.330 Sum_probs=122.5
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhcccc-chHHHHHHHhhhcCCCCccccHHHHHHHHHhhCCCC
Q 048069 6 WAVTVNEVEALYDLFKKLSSSIIDDGLIHKEEFQLALLRNSSK-QNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFHPSA 84 (213)
Q Consensus 6 ~~~s~~~i~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~ 84 (213)
.-|++.||+++++.|..+|.+ +||.|++++++..+.+++.. .+..+..|+.. ..|.|+|--|+.++.....+.
T Consensus 24 amf~q~QIqEfKEAF~~mDqn--rDG~IdkeDL~d~~aSlGk~~~d~elDaM~~E----a~gPINft~FLTmfGekL~gt 97 (171)
T KOG0031|consen 24 AMFDQSQIQEFKEAFNLMDQN--RDGFIDKEDLRDMLASLGKIASDEELDAMMKE----APGPINFTVFLTMFGEKLNGT 97 (171)
T ss_pred HHhhHHHHHHHHHHHHHHhcc--CCCcccHHHHHHHHHHcCCCCCHHHHHHHHHh----CCCCeeHHHHHHHHHHHhcCC
Confidence 458999999999999999999 99999999999999887755 44555666554 478999999999998877778
Q ss_pred chHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHhC
Q 048069 85 PEAEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEAD 164 (213)
Q Consensus 85 ~~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D 164 (213)
.+++.+.-+|+.||.++.|.|..+. ++++|... |.+.++++|++ +++.+-
T Consensus 98 dpe~~I~~AF~~FD~~~~G~I~~d~----------------------lre~Ltt~----gDr~~~eEV~~----m~r~~p 147 (171)
T KOG0031|consen 98 DPEEVILNAFKTFDDEGSGKIDEDY----------------------LRELLTTM----GDRFTDEEVDE----MYREAP 147 (171)
T ss_pred CHHHHHHHHHHhcCccCCCccCHHH----------------------HHHHHHHh----cccCCHHHHHH----HHHhCC
Confidence 8999999999999999999999999 88888776 88999999854 459998
Q ss_pred CCCCCcccHHHHHHHHh
Q 048069 165 IKGDGKIDLEEWTEFAG 181 (213)
Q Consensus 165 ~~~dg~It~~ef~~~l~ 181 (213)
++..|.++|..|..++.
T Consensus 148 ~d~~G~~dy~~~~~~it 164 (171)
T KOG0031|consen 148 IDKKGNFDYKAFTYIIT 164 (171)
T ss_pred cccCCceeHHHHHHHHH
Confidence 88999999999999886
No 11
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=99.50 E-value=7.5e-13 Score=98.71 Aligned_cols=143 Identities=19% Similarity=0.276 Sum_probs=118.7
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhcccc-chHHHHHHHhhhcCC--CCccccHHHHHHHHHhhCC
Q 048069 6 WAVTVNEVEALYDLFKKLSSSIIDDGLIHKEEFQLALLRNSSK-QNLFADRIFDLFDVK--RNGVIEFGEFVRSLSIFHP 82 (213)
Q Consensus 6 ~~~s~~~i~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~--~~g~I~f~ef~~~~~~~~~ 82 (213)
..++++++..++++|..+|.. ++|.|+..+.-..+..++.+ .+..+.+.....+.+ +-..|+|++|+.++..+.+
T Consensus 3 ~~~~~d~~~e~ke~F~lfD~~--gD~ki~~~q~gdvlRalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vak 80 (152)
T KOG0030|consen 3 IAFTPDQMEEFKEAFLLFDRT--GDGKISGSQVGDVLRALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAK 80 (152)
T ss_pred cccCcchHHHHHHHHHHHhcc--CcccccHHHHHHHHHHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHh
Confidence 457788889999999999999 99999999999998887755 455667777777666 4578999999999988765
Q ss_pred C--CchHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHH
Q 048069 83 S--APEAEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTM 160 (213)
Q Consensus 83 ~--~~~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f 160 (213)
+ +..-+..-.-.+.||++++|.|...| |++++.++ |..+++++++.++
T Consensus 81 nk~q~t~edfvegLrvFDkeg~G~i~~ae----------------------LRhvLttl----Gekl~eeEVe~Ll---- 130 (152)
T KOG0030|consen 81 NKDQGTYEDFVEGLRVFDKEGNGTIMGAE----------------------LRHVLTTL----GEKLTEEEVEELL---- 130 (152)
T ss_pred ccccCcHHHHHHHHHhhcccCCcceeHHH----------------------HHHHHHHH----HhhccHHHHHHHH----
Confidence 3 33456667789999999999999999 99999888 9999999998877
Q ss_pred HHhCCCCCCcccHHHHHHHHh
Q 048069 161 MEADIKGDGKIDLEEWTEFAG 181 (213)
Q Consensus 161 ~~~D~~~dg~It~~ef~~~l~ 181 (213)
+-. .|++|.|.|+.|++-+.
T Consensus 131 ag~-eD~nG~i~YE~fVk~i~ 150 (152)
T KOG0030|consen 131 AGQ-EDSNGCINYEAFVKHIM 150 (152)
T ss_pred ccc-cccCCcCcHHHHHHHHh
Confidence 433 47889999999998764
No 12
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=99.49 E-value=9.8e-13 Score=113.59 Aligned_cols=140 Identities=26% Similarity=0.389 Sum_probs=121.4
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhcccc--chHHHHHHHhhhcCCCCccccHHHHHHHHHhhCCCC
Q 048069 7 AVTVNEVEALYDLFKKLSSSIIDDGLIHKEEFQLALLRNSSK--QNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFHPSA 84 (213)
Q Consensus 7 ~~s~~~i~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~~~~~--~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~ 84 (213)
..+++.-.++..+|+.+|.+ ++|.++..++.+++..+..+ ....++.+|..+|.+.+|.++|.||..++...
T Consensus 7 ~~~~er~~r~~~lf~~lD~~--~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~~---- 80 (463)
T KOG0036|consen 7 ETDEERDIRIRCLFKELDSK--NDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLDNK---- 80 (463)
T ss_pred CCcHHHHHHHHHHHHHhccC--CCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHHHh----
Confidence 34555567889999999999 99999999999988766544 44566899999999999999999999999553
Q ss_pred chHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHhC
Q 048069 85 PEAEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEAD 164 (213)
Q Consensus 85 ~~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D 164 (213)
+.++..+|+..|.++||.|...| +.+.+..+ +..+++++++.+ |..+|
T Consensus 81 --E~~l~~~F~~iD~~hdG~i~~~E----------------------i~~~l~~~----gi~l~de~~~k~----~e~~d 128 (463)
T KOG0036|consen 81 --ELELYRIFQSIDLEHDGKIDPNE----------------------IWRYLKDL----GIQLSDEKAAKF----FEHMD 128 (463)
T ss_pred --HHHHHHHHhhhccccCCccCHHH----------------------HHHHHHHh----CCccCHHHHHHH----HHHhc
Confidence 45788899999999999999999 88888777 889999988654 48899
Q ss_pred CCCCCcccHHHHHHHHhhCh
Q 048069 165 IKGDGKIDLEEWTEFAGRNP 184 (213)
Q Consensus 165 ~~~dg~It~~ef~~~l~~~~ 184 (213)
+++++.|+++||...+..+|
T Consensus 129 ~~g~~~I~~~e~rd~~ll~p 148 (463)
T KOG0036|consen 129 KDGKATIDLEEWRDHLLLYP 148 (463)
T ss_pred cCCCeeeccHHHHhhhhcCC
Confidence 99999999999999999988
No 13
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=99.34 E-value=5.3e-12 Score=83.70 Aligned_cols=66 Identities=33% Similarity=0.679 Sum_probs=58.6
Q ss_pred HHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHhCCCCC
Q 048069 89 KITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEADIKGD 168 (213)
Q Consensus 89 ~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D~~~d 168 (213)
+++.+|+.+|.+++|+|+.+| ++.++..+ +...++..+++.++.+|+.+|.++|
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~e----------------------l~~~~~~~----~~~~~~~~~~~~~~~~~~~~D~d~d 54 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEE----------------------LRRALKHL----GRDMSDEESDEMIDQIFREFDTDGD 54 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHH----------------------HHHHHHHT----TSHSTHHHHHHHHHHHHHHHTTTSS
T ss_pred CHHHHHHHHcCCccCCCCHHH----------------------HHHHHHHh----cccccHHHHHHHHHHHHHHhCCCCc
Confidence 478899999999999999999 77777666 5666688888889999999999999
Q ss_pred CcccHHHHHHHH
Q 048069 169 GKIDLEEWTEFA 180 (213)
Q Consensus 169 g~It~~ef~~~l 180 (213)
|.|+++||.+++
T Consensus 55 G~i~~~Ef~~~~ 66 (66)
T PF13499_consen 55 GRISFDEFLNFM 66 (66)
T ss_dssp SSEEHHHHHHHH
T ss_pred CCCcHHHHhccC
Confidence 999999999875
No 14
>PLN02964 phosphatidylserine decarboxylase
Probab=99.21 E-value=1.9e-10 Score=106.45 Aligned_cols=104 Identities=24% Similarity=0.379 Sum_probs=86.4
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhcc-ccc----hHHHHHHHhhhcCCCCccccHHHHHHHHHhh
Q 048069 6 WAVTVNEVEALYDLFKKLSSSIIDDGLIHKEEFQLALLRNS-SKQ----NLFADRIFDLFDVKRNGVIEFGEFVRSLSIF 80 (213)
Q Consensus 6 ~~~s~~~i~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~~~-~~~----~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~ 80 (213)
+.|+.+|++.+++.|+.+|++ ++|.+ +..++..++ ..+ ..+++.+|..+|.+++|.|+|+||+.++..+
T Consensus 135 t~f~~kqi~elkeaF~lfD~d--gdG~i----Lg~ilrslG~~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~l 208 (644)
T PLN02964 135 FDFVTQEPESACESFDLLDPS--SSNKV----VGSIFVSCSIEDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAF 208 (644)
T ss_pred hhccHHHHHHHHHHHHHHCCC--CCCcC----HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHh
Confidence 678999999999999999999 99987 444444444 122 2347999999999999999999999999987
Q ss_pred CCCCchHHHHHHHhhhhcCCCCCcccHHHHHHHhhc
Q 048069 81 HPSAPEAEKITFAFRLYDLRGTGYIAREELCNICKS 116 (213)
Q Consensus 81 ~~~~~~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~ 116 (213)
. ....+++++.+|+.||.|++|+|+.+||.+++..
T Consensus 209 g-~~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~ 243 (644)
T PLN02964 209 G-NLVAANKKEELFKAADLNGDGVVTIDELAALLAL 243 (644)
T ss_pred c-cCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 5 4567888999999999999999999996666444
No 15
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.13 E-value=7.5e-10 Score=85.47 Aligned_cols=105 Identities=25% Similarity=0.327 Sum_probs=83.9
Q ss_pred HHHHHHHhhhcCCCCccccHHHHHHHHHhhCCCCchHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHH
Q 048069 51 LFADRIFDLFDVKRNGVIEFGEFVRSLSIFHPSAPEAEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLW 130 (213)
Q Consensus 51 ~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~ 130 (213)
.....+|..+|.+++|.|+-.|+..+++.+.. .+....+..+++.+|.+++|.|+.+||.
T Consensus 8 ~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~-~~t~~el~~~~~~~D~dg~g~I~~~eF~------------------- 67 (151)
T KOG0027|consen 8 LELKEAFQLFDKDGDGKISVEELGAVLRSLGQ-NPTEEELRDLIKEIDLDGDGTIDFEEFL------------------- 67 (151)
T ss_pred HHHHHHHHHHCCCCCCcccHHHHHHHHHHcCC-CCCHHHHHHHHHHhCCCCCCeEcHHHHH-------------------
Confidence 34588999999999999999999999999884 6788899999999999999999999944
Q ss_pred HHHHHHHHHhhhccccCChH-HHHHHHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 048069 131 KLKEMVVSLLSESELALSDD-VVESIVDKTMMEADIKGDGKIDLEEWTEFAGR 182 (213)
Q Consensus 131 ~l~~~l~~~~~~~~~~~~~~-~~~~~~~~~f~~~D~~~dg~It~~ef~~~l~~ 182 (213)
.++..... ..... .-.+.+..+|+.+|.+++|.||..|+.+++..
T Consensus 68 ---~l~~~~~~----~~~~~~~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~ 113 (151)
T KOG0027|consen 68 ---DLMEKLGE----EKTDEEASSEELKEAFRVFDKDGDGFISASELKKVLTS 113 (151)
T ss_pred ---HHHHhhhc----ccccccccHHHHHHHHHHHccCCCCcCcHHHHHHHHHH
Confidence 44433311 11111 11223478889999999999999999999976
No 16
>PTZ00184 calmodulin; Provisional
Probab=99.11 E-value=7.8e-10 Score=83.85 Aligned_cols=100 Identities=19% Similarity=0.245 Sum_probs=78.6
Q ss_pred HHHHHhhhcCCCCccccHHHHHHHHHhhCCCCchHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHH
Q 048069 53 ADRIFDLFDVKRNGVIEFGEFVRSLSIFHPSAPEAEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKL 132 (213)
Q Consensus 53 ~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l 132 (213)
....|..+|.+++|.|+++||..++..+.. ....+.+..+|+.+|.+++|.|+.++|.
T Consensus 13 ~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~-~~~~~~~~~~~~~~d~~~~g~i~~~ef~--------------------- 70 (149)
T PTZ00184 13 FKEAFSLFDKDGDGTITTKELGTVMRSLGQ-NPTEAELQDMINEVDADGNGTIDFPEFL--------------------- 70 (149)
T ss_pred HHHHHHHHcCCCCCcCCHHHHHHHHHHhCC-CCCHHHHHHHHHhcCcCCCCcCcHHHHH---------------------
Confidence 468899999999999999999999877653 4556789999999999999999999954
Q ss_pred HHHHHHHhhhccccCChHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 048069 133 KEMVVSLLSESELALSDDVVESIVDKTMMEADIKGDGKIDLEEWTEFAGR 182 (213)
Q Consensus 133 ~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dg~It~~ef~~~l~~ 182 (213)
.++.... .... .+..+..+|..+|.+++|.|+.+||..++..
T Consensus 71 -~~l~~~~---~~~~----~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~ 112 (149)
T PTZ00184 71 -TLMARKM---KDTD----SEEEIKEAFKVFDRDGNGFISAAELRHVMTN 112 (149)
T ss_pred -HHHHHhc---cCCc----HHHHHHHHHHhhCCCCCCeEeHHHHHHHHHH
Confidence 4433221 1111 1223577889999999999999999998854
No 17
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=99.10 E-value=9.7e-10 Score=95.99 Aligned_cols=141 Identities=21% Similarity=0.230 Sum_probs=103.5
Q ss_pred HHHHHHHhhcCCCCCCCcccHHHHHHHHhhccccchHHHHHHHhhhcCCCCccccHHHHHHHHHhhCCCCc---------
Q 048069 15 ALYDLFKKLSSSIIDDGLIHKEEFQLALLRNSSKQNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFHPSAP--------- 85 (213)
Q Consensus 15 ~l~~~F~~~d~~~~~~g~is~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~--------- 85 (213)
+|.+.|+++|+. ++|+|+...|..++.....-.-++.----.+...+.+|.|.|.+-...+..-.....
T Consensus 465 dL~~eF~~~D~~--ksG~lsis~Wa~~mE~i~~L~LPWr~L~~kla~~s~d~~v~Y~~~~~~l~~e~~~~ea~~slvetL 542 (631)
T KOG0377|consen 465 DLEDEFRKYDPK--KSGKLSISHWAKCMENITGLNLPWRLLRPKLANGSDDGKVEYKSTLDNLDTEVILEEAGSSLVETL 542 (631)
T ss_pred HHHHHHHhcChh--hcCeeeHHHHHHHHHHHhcCCCcHHHhhhhccCCCcCcceehHhHHHHhhhhhHHHHHHhHHHHHH
Confidence 466889999999 999999999998884432222222111223444566788988887776544221100
Q ss_pred --hHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHh
Q 048069 86 --EAEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEA 163 (213)
Q Consensus 86 --~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~ 163 (213)
....+..+|+.+|.|+.|.||.+| ++.++..+.+..+.+++++.+.+++ ..+
T Consensus 543 Yr~ks~LetiF~~iD~D~SG~isldE----------------------F~~a~~l~~sh~~~~i~~~~i~~la----~~m 596 (631)
T KOG0377|consen 543 YRNKSSLETIFNIIDADNSGEISLDE----------------------FRTAWKLLSSHMNGAISDDEILELA----RSM 596 (631)
T ss_pred HhchhhHHHHHHHhccCCCCceeHHH----------------------HHHHHHHHHhhcCCCcCHHHHHHHH----Hhh
Confidence 123578899999999999999999 6667766666667888898887777 899
Q ss_pred CCCCCCcccHHHHHHHHhhC
Q 048069 164 DIKGDGKIDLEEWTEFAGRN 183 (213)
Q Consensus 164 D~~~dg~It~~ef~~~l~~~ 183 (213)
|.|+||+|++.||+++++.-
T Consensus 597 D~NkDG~IDlNEfLeAFrlv 616 (631)
T KOG0377|consen 597 DLNKDGKIDLNEFLEAFRLV 616 (631)
T ss_pred ccCCCCcccHHHHHHHHhhh
Confidence 99999999999999988653
No 18
>PTZ00183 centrin; Provisional
Probab=99.10 E-value=7.6e-10 Score=85.03 Aligned_cols=101 Identities=25% Similarity=0.279 Sum_probs=79.3
Q ss_pred HHHHHHhhhcCCCCccccHHHHHHHHHhhCCCCchHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHH
Q 048069 52 FADRIFDLFDVKRNGVIEFGEFVRSLSIFHPSAPEAEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWK 131 (213)
Q Consensus 52 ~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~ 131 (213)
.+..+|..+|.+++|.|++.||..++..... ......+..+|+.+|.+++|.|+.+||..
T Consensus 18 ~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~-~~~~~~~~~l~~~~d~~~~g~i~~~eF~~------------------- 77 (158)
T PTZ00183 18 EIREAFDLFDTDGSGTIDPKELKVAMRSLGF-EPKKEEIKQMIADVDKDGSGKIDFEEFLD------------------- 77 (158)
T ss_pred HHHHHHHHhCCCCCCcccHHHHHHHHHHhCC-CCCHHHHHHHHHHhCCCCCCcEeHHHHHH-------------------
Confidence 3578899999999999999999999987642 35567899999999999999999999543
Q ss_pred HHHHHHHHhhhccccCChHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 048069 132 LKEMVVSLLSESELALSDDVVESIVDKTMMEADIKGDGKIDLEEWTEFAGR 182 (213)
Q Consensus 132 l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dg~It~~ef~~~l~~ 182 (213)
++.... ....... .++.+|+.+|.+++|.|+.+||..++..
T Consensus 78 ---~~~~~~---~~~~~~~----~l~~~F~~~D~~~~G~i~~~e~~~~l~~ 118 (158)
T PTZ00183 78 ---IMTKKL---GERDPRE----EILKAFRLFDDDKTGKISLKNLKRVAKE 118 (158)
T ss_pred ---HHHHHh---cCCCcHH----HHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 332211 1122222 2477789999999999999999999874
No 19
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.08 E-value=1.1e-09 Score=92.31 Aligned_cols=142 Identities=23% Similarity=0.319 Sum_probs=107.8
Q ss_pred HHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhcccc-chHHHHHHHhhhcCCCCccccHHHHHHHHHhhCC------CC-
Q 048069 13 VEALYDLFKKLSSSIIDDGLIHKEEFQLALLRNSSK-QNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFHP------SA- 84 (213)
Q Consensus 13 i~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~------~~- 84 (213)
-+++..++.++|.+ ++|.|+..+++..+...... ....+.+-+...|.+++|.|+|+|+......... ..
T Consensus 76 ~~rl~~l~~~iD~~--~Dgfv~~~El~~wi~~s~k~~v~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~~~~~~~~~d~e 153 (325)
T KOG4223|consen 76 QERLGKLVPKIDSD--SDGFVTESELKAWIMQSQKKYVVEEAARRWDEYDKNKDGFITWEEYLPQTYGRVDLPDEFPDEE 153 (325)
T ss_pred HHHHHHHHhhhcCC--CCCceeHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccceeeHHHhhhhhhhcccCccccccch
Confidence 45788889999988 99999999999887544322 3445577888899999999999999998775321 00
Q ss_pred ------chHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHH
Q 048069 85 ------PEAEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDK 158 (213)
Q Consensus 85 ------~~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 158 (213)
..-.+.+.-|+.-|.|++|.+|.+| +..++ ++.-.+....-++.+
T Consensus 154 ~~~~~~km~~rDe~rFk~AD~d~dg~lt~EE----------------------F~aFL-------HPEe~p~M~~iVi~E 204 (325)
T KOG4223|consen 154 DNEEYKKMIARDEERFKAADQDGDGSLTLEE----------------------FTAFL-------HPEEHPHMKDIVIAE 204 (325)
T ss_pred hcHHHHHHHHHHHHHHhhcccCCCCcccHHH----------------------HHhcc-------ChhhcchHHHHHHHH
Confidence 0112456679999999999999999 55554 344444455555677
Q ss_pred HHHHhCCCCCCcccHHHHHHHHhhChh
Q 048069 159 TMMEADIKGDGKIDLEEWTEFAGRNPT 185 (213)
Q Consensus 159 ~f~~~D~~~dg~It~~ef~~~l~~~~~ 185 (213)
.+..+|+|+||+|+++||+.-|-+++.
T Consensus 205 tl~d~Dkn~DG~I~~eEfigd~~~~~~ 231 (325)
T KOG4223|consen 205 TLEDIDKNGDGKISLEEFIGDLYSHEG 231 (325)
T ss_pred HHhhcccCCCCceeHHHHHhHHhhccC
Confidence 779999999999999999998877664
No 20
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.08 E-value=7.4e-10 Score=88.44 Aligned_cols=104 Identities=22% Similarity=0.307 Sum_probs=83.5
Q ss_pred HHHHHHHHhhcCCCCCCCcccHHHHHHHHhh-ccccchHHHHHHHhhhcCCCCccccHHHHHHHHHhhCC----------
Q 048069 14 EALYDLFKKLSSSIIDDGLIHKEEFQLALLR-NSSKQNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFHP---------- 82 (213)
Q Consensus 14 ~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~-~~~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~---------- 82 (213)
.....+|..+|.+ ++|.|++.||..++.. .........+-.|+++|.|++|.|+++|++.++..+..
T Consensus 64 ~y~~~vF~~fD~~--~dg~i~F~Efi~als~~~rGt~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~ 141 (193)
T KOG0044|consen 64 KYAELVFRTFDKN--KDGTIDFLEFICALSLTSRGTLEEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPED 141 (193)
T ss_pred HHHHHHHHHhccc--CCCCcCHHHHHHHHHHHcCCcHHHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcc
Confidence 3445678889999 9999999999877733 33345555677899999999999999999998776431
Q ss_pred CCchHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCc
Q 048069 83 SAPEAEKITFAFRLYDLRGTGYIAREELCNICKSDTD 119 (213)
Q Consensus 83 ~~~~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~ 119 (213)
...+++.+..+|+.+|.|++|.||.+||...+..++.
T Consensus 142 ~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~d~~ 178 (193)
T KOG0044|consen 142 EETPEERVDKIFSKMDKNKDGKLTLEEFIEGCKADPS 178 (193)
T ss_pred cccHHHHHHHHHHHcCCCCCCcccHHHHHHHhhhCHH
Confidence 2347889999999999999999999998877776433
No 21
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.07 E-value=1.7e-09 Score=91.18 Aligned_cols=133 Identities=23% Similarity=0.317 Sum_probs=97.2
Q ss_pred HHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccc---cchHHHHHHHhhhcCCCCccccHHHHHHHHHhhCCCCch---
Q 048069 13 VEALYDLFKKLSSSIIDDGLIHKEEFQLALLRNSS---KQNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFHPSAPE--- 86 (213)
Q Consensus 13 i~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~~~~---~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~--- 86 (213)
+.+=...|+..|.+ ++|.++.+||...+ .+.- ...-.+...+.-.|.|++|.|+++||+.-+.....++..
T Consensus 162 ~~rDe~rFk~AD~d--~dg~lt~EEF~aFL-HPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~~~~~epeW 238 (325)
T KOG4223|consen 162 IARDEERFKAADQD--GDGSLTLEEFTAFL-HPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSHEGNEEEPEW 238 (325)
T ss_pred HHHHHHHHhhcccC--CCCcccHHHHHhcc-ChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhccCCCCCccc
Confidence 44456789999999 99999999999544 3321 234456888899999999999999999977665532221
Q ss_pred -HHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHhCC
Q 048069 87 -AEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEADI 165 (213)
Q Consensus 87 -~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D~ 165 (213)
..+-.+.+...|+|++|+++.+| +.+-+ .+-.....+.-+..++...|.
T Consensus 239 v~~Ere~F~~~~DknkDG~L~~dE----------------------l~~WI--------~P~~~d~A~~EA~hL~~eaD~ 288 (325)
T KOG4223|consen 239 VLTEREQFFEFRDKNKDGKLDGDE----------------------LLDWI--------LPSEQDHAKAEARHLLHEADE 288 (325)
T ss_pred ccccHHHHHHHhhcCCCCccCHHH----------------------Hhccc--------CCCCccHHHHHHHHHhhhhcc
Confidence 12345788889999999999999 55432 112222333335777799999
Q ss_pred CCCCcccHHHHHH
Q 048069 166 KGDGKIDLEEWTE 178 (213)
Q Consensus 166 ~~dg~It~~ef~~ 178 (213)
|+||++|++|.+.
T Consensus 289 dkD~kLs~eEIl~ 301 (325)
T KOG4223|consen 289 DKDGKLSKEEILE 301 (325)
T ss_pred CccccccHHHHhh
Confidence 9999999999764
No 22
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=99.04 E-value=9.3e-10 Score=77.55 Aligned_cols=67 Identities=24% Similarity=0.425 Sum_probs=54.7
Q ss_pred HHHHHHhhhhcC-CCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHH-HhhhccccCCh-HHHHHHHHHHHHHhC
Q 048069 88 EKITFAFRLYDL-RGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVS-LLSESELALSD-DVVESIVDKTMMEAD 164 (213)
Q Consensus 88 ~~~~~~F~~fD~-d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~-~~~~~~~~~~f~~~D 164 (213)
..+..+|+.||+ +++|+|+..| |+.++.. + +..++. +.+ +.+++..|
T Consensus 8 ~~l~~~F~~fd~~~~~g~i~~~E----------------------Lk~ll~~el----g~~ls~~~~v----~~mi~~~D 57 (89)
T cd05022 8 ETLVSNFHKASVKGGKESLTASE----------------------FQELLTQQL----PHLLKDVEGL----EEKMKNLD 57 (89)
T ss_pred HHHHHHHHHHhCCCCCCeECHHH----------------------HHHHHHHHh----hhhccCHHHH----HHHHHHhC
Confidence 457889999999 9999999999 7777766 4 445665 555 55559999
Q ss_pred CCCCCcccHHHHHHHHhhCh
Q 048069 165 IKGDGKIDLEEWTEFAGRNP 184 (213)
Q Consensus 165 ~~~dg~It~~ef~~~l~~~~ 184 (213)
.|+||.|+|+||+.++.+.-
T Consensus 58 ~d~DG~I~F~EF~~l~~~l~ 77 (89)
T cd05022 58 VNQDSKLSFEEFWELIGELA 77 (89)
T ss_pred CCCCCCCcHHHHHHHHHHHH
Confidence 99999999999999887643
No 23
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.02 E-value=1.1e-08 Score=82.09 Aligned_cols=130 Identities=18% Similarity=0.329 Sum_probs=103.3
Q ss_pred ccCCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccccchHHHHHHHhhhcCCCCccccHHHHHHHHHhhCCC
Q 048069 4 DFWAVTVNEVEALYDLFKKLSSSIIDDGLIHKEEFQLALLRNSSKQNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFHPS 83 (213)
Q Consensus 4 ~~~~~s~~~i~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~ 83 (213)
....|+.+.++-+..+|++- .+|.|+.+||....+.+ ...+.+|+.+|.|++|.|+..|+..++..+- -
T Consensus 87 ~~~~Fs~~TcrlmI~mfd~~-----~~G~i~f~EF~~Lw~~i-----~~Wr~vF~~~D~D~SG~I~~sEL~~Al~~~G-y 155 (221)
T KOG0037|consen 87 TWSPFSIETCRLMISMFDRD-----NSGTIGFKEFKALWKYI-----NQWRNVFRTYDRDRSGTIDSSELRQALTQLG-Y 155 (221)
T ss_pred CCCCCCHHHHHHHHHHhcCC-----CCCccCHHHHHHHHHHH-----HHHHHHHHhcccCCCCcccHHHHHHHHHHcC-c
Confidence 45668888888887777654 99999999999544222 2348899999999999999999999999987 4
Q ss_pred CchHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHh
Q 048069 84 APEAEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEA 163 (213)
Q Consensus 84 ~~~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~ 163 (213)
....+....+++.||..++|.|.+++|.+.+.. |.. +-..|+..
T Consensus 156 ~Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv~---------------L~~---------------------lt~~Fr~~ 199 (221)
T KOG0037|consen 156 RLSPQFYNLLVRKYDRFGGGRIDFDDFIQCCVV---------------LQR---------------------LTEAFRRR 199 (221)
T ss_pred CCCHHHHHHHHHHhccccCCceeHHHHHHHHHH---------------HHH---------------------HHHHHHHh
Confidence 678889999999999888999999996654443 322 24556899
Q ss_pred CCCCCCc--ccHHHHHHHH
Q 048069 164 DIKGDGK--IDLEEWTEFA 180 (213)
Q Consensus 164 D~~~dg~--It~~ef~~~l 180 (213)
|.+.+|. |+|++|+.+.
T Consensus 200 D~~q~G~i~~~y~dfl~~t 218 (221)
T KOG0037|consen 200 DTAQQGSITISYDDFLQMT 218 (221)
T ss_pred ccccceeEEEeHHHHHHHh
Confidence 9988885 7899998764
No 24
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=99.00 E-value=1.2e-09 Score=82.41 Aligned_cols=104 Identities=16% Similarity=0.255 Sum_probs=87.2
Q ss_pred hhcCCCCCCCcccHHHHHHHHh--hccccchHHHHHHHhhhcCCCCccccHHHHHHHHHhhCCCCchHHHHHHHhhh---
Q 048069 22 KLSSSIIDDGLIHKEEFQLALL--RNSSKQNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFHPSAPEAEKITFAFRL--- 96 (213)
Q Consensus 22 ~~d~~~~~~g~is~~ef~~~l~--~~~~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~--- 96 (213)
.++.+ |.|.++..+|..++. +...+.+..+.-.|+++|-|+++.|.-+++...+..+.++....+++.++...
T Consensus 79 ~FSeD--G~GnlsfddFlDmfSV~sE~APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr~eLs~eEv~~i~ekvie 156 (189)
T KOG0038|consen 79 VFSED--GRGNLSFDDFLDMFSVFSEMAPRDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSLTRDELSDEEVELICEKVIE 156 (189)
T ss_pred HhccC--CCCcccHHHHHHHHHHHHhhChHHhhhhheeEEeecCCCCcccHHHHHHHHHHHhhccCCHHHHHHHHHHHHH
Confidence 34455 999999999998873 23344566678889999999999999999999999999888777776666554
Q ss_pred -hcCCCCCcccHHHHHHHhhccCchhHHHHHH
Q 048069 97 -YDLRGTGYIAREELCNICKSDTDSLCCKYVL 127 (213)
Q Consensus 97 -fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~ 127 (213)
-|.||+|.|+..||.+++.+.||+++++|.+
T Consensus 157 EAD~DgDgkl~~~eFe~~i~raPDFlsTFHIR 188 (189)
T KOG0038|consen 157 EADLDGDGKLSFAEFEHVILRAPDFLSTFHIR 188 (189)
T ss_pred HhcCCCCCcccHHHHHHHHHhCcchHhhheec
Confidence 4899999999999999999999999999974
No 25
>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]
Probab=98.98 E-value=8e-09 Score=90.80 Aligned_cols=147 Identities=22% Similarity=0.325 Sum_probs=113.6
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccccchHHHHHHHhhhc----CCCCccccHHHHHHHHHhhC
Q 048069 6 WAVTVNEVEALYDLFKKLSSSIIDDGLIHKEEFQLALLRNSSKQNLFADRIFDLFD----VKRNGVIEFGEFVRSLSIFH 81 (213)
Q Consensus 6 ~~~s~~~i~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~~~~~~~~~~~~lf~~~d----~~~~g~I~f~ef~~~~~~~~ 81 (213)
..||...-..++..|..+|.+ ++|.|+++++...- ..+...-.++++|..+- ...+|+++|++|+.++-+..
T Consensus 270 ~~FS~e~f~viy~kFweLD~D--hd~lidk~~L~ry~--d~tlt~~ivdRIFs~v~r~~~~~~eGrmdykdFv~FilA~e 345 (493)
T KOG2562|consen 270 RYFSYEHFYVIYCKFWELDTD--HDGLIDKEDLKRYG--DHTLTERIVDRIFSQVPRGFTVKVEGRMDYKDFVDFILAEE 345 (493)
T ss_pred hheeHHHHHHHHHHHhhhccc--cccccCHHHHHHHh--ccchhhHHHHHHHhhccccceeeecCcccHHHHHHHHHHhc
Confidence 457777888899999999999 99999999999543 33334678899999443 34689999999999998887
Q ss_pred CCCchHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHH
Q 048069 82 PSAPEAEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMM 161 (213)
Q Consensus 82 ~~~~~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~ 161 (213)
......-++.-|+.+|.+++|.|+..|+..+... ..+.|... ....++ ++.++.+++.
T Consensus 346 -~k~t~~SleYwFrclDld~~G~Lt~~el~~fyee---------------q~~rm~~~---~~e~l~---fed~l~qi~D 403 (493)
T KOG2562|consen 346 -DKDTPASLEYWFRCLDLDGDGILTLNELRYFYEE---------------QLQRMECM---GQEALP---FEDALCQIRD 403 (493)
T ss_pred -cCCCccchhhheeeeeccCCCcccHHHHHHHHHH---------------HHHHHHhc---CCCccc---HHHHHHHHHH
Confidence 4666778999999999999999999997766444 33333322 123333 3555778888
Q ss_pred HhCCCCCCcccHHHHHH
Q 048069 162 EADIKGDGKIDLEEWTE 178 (213)
Q Consensus 162 ~~D~~~dg~It~~ef~~ 178 (213)
.+.+...|+||+.+|..
T Consensus 404 MvkP~~~~kItLqDlk~ 420 (493)
T KOG2562|consen 404 MVKPEDENKITLQDLKG 420 (493)
T ss_pred HhCccCCCceeHHHHhh
Confidence 88878889999999998
No 26
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=98.93 E-value=9.8e-09 Score=79.55 Aligned_cols=100 Identities=20% Similarity=0.255 Sum_probs=81.4
Q ss_pred HHHHHHhhhcCCCCccccHHHHHHHHHhhCCCCchHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHH
Q 048069 52 FADRIFDLFDVKRNGVIEFGEFVRSLSIFHPSAPEAEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWK 131 (213)
Q Consensus 52 ~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~ 131 (213)
..++.|..+|.+++|.|+..++..+++.+. ..++...+..+|..+|. ++|.|+..+|
T Consensus 21 ~lkeaF~l~D~d~~G~I~~~el~~ilr~lg-~~~s~~ei~~l~~~~d~-~~~~idf~~F--------------------- 77 (160)
T COG5126 21 ELKEAFQLFDRDSDGLIDRNELGKILRSLG-FNPSEAEINKLFEEIDA-GNETVDFPEF--------------------- 77 (160)
T ss_pred HHHHHHHHhCcCCCCCCcHHHHHHHHHHcC-CCCcHHHHHHHHHhccC-CCCccCHHHH---------------------
Confidence 357899999999999999999999999655 68889999999999999 9999999994
Q ss_pred HHHHHHHHhhhccccCChHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 048069 132 LKEMVVSLLSESELALSDDVVESIVDKTMMEADIKGDGKIDLEEWTEFAGR 182 (213)
Q Consensus 132 l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dg~It~~ef~~~l~~ 182 (213)
-.++.... ...-+.++ +...|+.+|+++||+|+..+++.++..
T Consensus 78 -l~~ms~~~---~~~~~~Ee----l~~aF~~fD~d~dG~Is~~eL~~vl~~ 120 (160)
T COG5126 78 -LTVMSVKL---KRGDKEEE----LREAFKLFDKDHDGYISIGELRRVLKS 120 (160)
T ss_pred -HHHHHHHh---ccCCcHHH----HHHHHHHhCCCCCceecHHHHHHHHHh
Confidence 44443221 12222333 478889999999999999999999974
No 27
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.90 E-value=8.1e-09 Score=72.66 Aligned_cols=69 Identities=26% Similarity=0.415 Sum_probs=53.3
Q ss_pred HHHHHHhhhhc-CCCCC-cccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHh-hhccccCChHHHHHHHHHHHHHhC
Q 048069 88 EKITFAFRLYD-LRGTG-YIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLL-SESELALSDDVVESIVDKTMMEAD 164 (213)
Q Consensus 88 ~~~~~~F~~fD-~d~~g-~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~f~~~D 164 (213)
..++.+|+.|| .+++| +|+.+| |+.++.+-+ ...+...+++.+++++ +..|
T Consensus 8 ~~l~~aF~~fD~~dgdG~~I~~~e----------------------L~~ll~~~~~~~lg~~~~~~~v~~~i----~~~D 61 (88)
T cd05027 8 VALIDVFHQYSGREGDKHKLKKSE----------------------LKELINNELSHFLEEIKEQEVVDKVM----ETLD 61 (88)
T ss_pred HHHHHHHHHhcccCCCcCEECHHH----------------------HHHHHHHHhHHHhcCCCCHHHHHHHH----HHhC
Confidence 35788999998 79999 599999 666666500 0015666777776665 8999
Q ss_pred CCCCCcccHHHHHHHHhh
Q 048069 165 IKGDGKIDLEEWTEFAGR 182 (213)
Q Consensus 165 ~~~dg~It~~ef~~~l~~ 182 (213)
.|++|.|+|+||+.++..
T Consensus 62 ~n~dG~v~f~eF~~li~~ 79 (88)
T cd05027 62 SDGDGECDFQEFMAFVAM 79 (88)
T ss_pred CCCCCcCcHHHHHHHHHH
Confidence 999999999999988754
No 28
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=98.89 E-value=2e-08 Score=80.09 Aligned_cols=100 Identities=21% Similarity=0.353 Sum_probs=79.4
Q ss_pred HHHHhhcCCCCCCCc-ccHHHHHHHHhhcc--ccchHHHHHHHhhhcCCCCccccHHHHHHHHHhhCCCCch------HH
Q 048069 18 DLFKKLSSSIIDDGL-IHKEEFQLALLRNS--SKQNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFHPSAPE------AE 88 (213)
Q Consensus 18 ~~F~~~d~~~~~~g~-is~~ef~~~l~~~~--~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~------~~ 88 (213)
.+++.++.+ ++|. |++++|...+.... .......+-.|+.+|.+++|.|+.+|+..++..+...... .+
T Consensus 70 rI~~~f~~~--~~~~~v~F~~Fv~~ls~f~~~~~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~ 147 (187)
T KOG0034|consen 70 RIIDRFDTD--GNGDPVDFEEFVRLLSVFSPKASKREKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLED 147 (187)
T ss_pred HHHHHHhcc--CCCCccCHHHHHHHHhhhcCCccHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHH
Confidence 456667776 7777 99999998884332 2333356779999999999999999999999988753333 45
Q ss_pred HHHHHhhhhcCCCCCcccHHHHHHHhhccCc
Q 048069 89 KITFAFRLYDLRGTGYIAREELCNICKSDTD 119 (213)
Q Consensus 89 ~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~ 119 (213)
.+...|..+|.|++|.|+.+||+.++.+.|+
T Consensus 148 i~d~t~~e~D~d~DG~IsfeEf~~~v~~~P~ 178 (187)
T KOG0034|consen 148 IVDKTFEEADTDGDGKISFEEFCKVVEKQPD 178 (187)
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHcCcc
Confidence 6788899999999999999998888777655
No 29
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.86 E-value=1.9e-08 Score=71.78 Aligned_cols=73 Identities=19% Similarity=0.471 Sum_probs=65.2
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccccchHHHHHHHhhhcCCCCccccHHHHHHHHHhhC
Q 048069 6 WAVTVNEVEALYDLFKKLSSSIIDDGLIHKEEFQLALLRNSSKQNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFH 81 (213)
Q Consensus 6 ~~~s~~~i~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~ 81 (213)
+.+|.+++..+...|..+|.+ ++|.|+..++..++...+ .....++.++..+|.+++|.|+|+||+.++..+.
T Consensus 2 ~~ls~~~~~~l~~~F~~~D~d--~~G~Is~~el~~~l~~~~-~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~~ 74 (96)
T smart00027 2 WAISPEDKAKYEQIFRSLDKN--QDGTVTGAQAKPILLKSG-LPQTLLAKIWNLADIDNDGELDKDEFALAMHLIY 74 (96)
T ss_pred CCCCHHHHHHHHHHHHHhCCC--CCCeEeHHHHHHHHHHcC-CCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHH
Confidence 678999999999999999999 999999999999987754 4556789999999999999999999999887654
No 30
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=98.86 E-value=8.4e-09 Score=68.14 Aligned_cols=61 Identities=36% Similarity=0.576 Sum_probs=44.1
Q ss_pred HHHHHHHhhcCCCCCCCcccHHHHHHHHhhcccc-----chHHHHHHHhhhcCCCCccccHHHHHHHH
Q 048069 15 ALYDLFKKLSSSIIDDGLIHKEEFQLALLRNSSK-----QNLFADRIFDLFDVKRNGVIEFGEFVRSL 77 (213)
Q Consensus 15 ~l~~~F~~~d~~~~~~g~is~~ef~~~l~~~~~~-----~~~~~~~lf~~~d~~~~g~I~f~ef~~~~ 77 (213)
+|..+|+.+|.+ ++|+|+.+||..++...... ....+..+|+.+|.+++|.|+|+||+.++
T Consensus 1 ~l~~~F~~~D~d--~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 1 RLKEAFKKFDKD--GDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHHSTT--SSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred CHHHHHHHHcCC--ccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 466778888888 88888888888777655432 23345666888888888888888887653
No 31
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.78 E-value=3.6e-08 Score=70.06 Aligned_cols=69 Identities=23% Similarity=0.349 Sum_probs=50.4
Q ss_pred HHHHHhhhhc-CCCCC-cccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhh-ccccCChHHHHHHHHHHHHHhCC
Q 048069 89 KITFAFRLYD-LRGTG-YIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSE-SELALSDDVVESIVDKTMMEADI 165 (213)
Q Consensus 89 ~~~~~F~~fD-~d~~g-~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~~~~~~~~f~~~D~ 165 (213)
.+..+|..|| +|++| +|+.+| |+.++...... .....++..+ +.+++.+|.
T Consensus 11 ~~~~~F~~~dd~dgdg~~Is~~E----------------------L~~ll~~~~~~~~~~~~~~~~v----~~i~~elD~ 64 (93)
T cd05026 11 TLIRIFHNYSGKEGDRYKLSKGE----------------------LKELLQRELTDFLSSQKDPMLV----DKIMNDLDS 64 (93)
T ss_pred HHHHHHHHHHccCCCCCEECHHH----------------------HHHHHHHHhHHhcccccCHHHH----HHHHHHhCC
Confidence 4677899999 78998 599999 66666542111 1122345555 455599999
Q ss_pred CCCCcccHHHHHHHHhhC
Q 048069 166 KGDGKIDLEEWTEFAGRN 183 (213)
Q Consensus 166 ~~dg~It~~ef~~~l~~~ 183 (213)
|+||.|+|+||+.++...
T Consensus 65 n~dG~Idf~EF~~l~~~l 82 (93)
T cd05026 65 NKDNEVDFNEFVVLVAAL 82 (93)
T ss_pred CCCCCCCHHHHHHHHHHH
Confidence 999999999999988664
No 32
>PLN02964 phosphatidylserine decarboxylase
Probab=98.77 E-value=8.4e-08 Score=89.13 Aligned_cols=99 Identities=15% Similarity=0.235 Sum_probs=73.2
Q ss_pred HHHHHHHhhhcCCCCccccHHHHHHHHHhhCCCCchHH---HHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHH
Q 048069 51 LFADRIFDLFDVKRNGVIEFGEFVRSLSIFHPSAPEAE---KITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVL 127 (213)
Q Consensus 51 ~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~---~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~ 127 (213)
..+.+.|..+|.+++|.+ +..++..+....+.++ .+..+|+.+|.+++|.|+.+|
T Consensus 143 ~elkeaF~lfD~dgdG~i----Lg~ilrslG~~~pte~e~~fi~~mf~~~D~DgdG~IdfdE------------------ 200 (644)
T PLN02964 143 ESACESFDLLDPSSSNKV----VGSIFVSCSIEDPVETERSFARRILAIVDYDEDGQLSFSE------------------ 200 (644)
T ss_pred HHHHHHHHHHCCCCCCcC----HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHH------------------
Confidence 445788999999999987 3334443321122333 389999999999999999999
Q ss_pred HHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHhhC
Q 048069 128 LLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEADIKGDGKIDLEEWTEFAGRN 183 (213)
Q Consensus 128 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dg~It~~ef~~~l~~~ 183 (213)
+..++..+ +...+++++ ..+|+.+|.|++|.|+++||..++...
T Consensus 201 ----Fl~lL~~l----g~~~seEEL----~eaFk~fDkDgdG~Is~dEL~~vL~~~ 244 (644)
T PLN02964 201 ----FSDLIKAF----GNLVAANKK----EELFKAADLNGDGVVTIDELAALLALQ 244 (644)
T ss_pred ----HHHHHHHh----ccCCCHHHH----HHHHHHhCCCCCCcCCHHHHHHHHHhc
Confidence 55555543 344455544 677799999999999999999998873
No 33
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.76 E-value=5.4e-08 Score=68.86 Aligned_cols=74 Identities=27% Similarity=0.432 Sum_probs=54.6
Q ss_pred HHHHHHHhhhhc-CCCCC-cccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhh-ccccCChHHHHHHHHHHHHHh
Q 048069 87 AEKITFAFRLYD-LRGTG-YIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSE-SELALSDDVVESIVDKTMMEA 163 (213)
Q Consensus 87 ~~~~~~~F~~fD-~d~~g-~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~~~~~~~~f~~~ 163 (213)
.+.++.+|+.|| .+++| .|+.+| ++.++...++. .+...+++.+ +.+++.+
T Consensus 8 ~~~l~~~F~~fDd~dg~G~~Is~~E----------------------l~~~l~~~lg~~~~~~~s~~~v----~~i~~~~ 61 (92)
T cd05025 8 METLINVFHAHSGKEGDKYKLSKKE----------------------LKDLLQTELSDFLDAQKDADAV----DKIMKEL 61 (92)
T ss_pred HHHHHHHHHHHhcccCCCCeECHHH----------------------HHHHHHHHHHHHccCCCCHHHH----HHHHHHH
Confidence 357889999997 99999 499999 77777542111 1223455665 4555899
Q ss_pred CCCCCCcccHHHHHHHHhhChhH
Q 048069 164 DIKGDGKIDLEEWTEFAGRNPTI 186 (213)
Q Consensus 164 D~~~dg~It~~ef~~~l~~~~~~ 186 (213)
|.+++|.|+|++|+.++...-..
T Consensus 62 D~d~~G~I~f~eF~~l~~~~~~~ 84 (92)
T cd05025 62 DENGDGEVDFQEFVVLVAALTVA 84 (92)
T ss_pred CCCCCCcCcHHHHHHHHHHHHHH
Confidence 99999999999999988764433
No 34
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=98.75 E-value=5.4e-08 Score=68.57 Aligned_cols=69 Identities=20% Similarity=0.260 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHhhcC-CCCCCCcccHHHHHHHHhh-cccc-ch-HHHHHHHhhhcCCCCccccHHHHHHHHHhhC
Q 048069 11 NEVEALYDLFKKLSS-SIIDDGLIHKEEFQLALLR-NSSK-QN-LFADRIFDLFDVKRNGVIEFGEFVRSLSIFH 81 (213)
Q Consensus 11 ~~i~~l~~~F~~~d~-~~~~~g~is~~ef~~~l~~-~~~~-~~-~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~ 81 (213)
..+..|...|..+|. + ++|+|+..+|+..+.. ++.. .. ..++.+++.+|.|++|.|+|+||+.++..+.
T Consensus 5 ~ai~~l~~~F~~fd~~~--~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l~ 77 (89)
T cd05022 5 KAIETLVSNFHKASVKG--GKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGELA 77 (89)
T ss_pred HHHHHHHHHHHHHhCCC--CCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHH
Confidence 457789999999999 8 9999999999998876 5432 33 6789999999999999999999999887654
No 35
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.74 E-value=4.9e-08 Score=69.34 Aligned_cols=71 Identities=27% Similarity=0.416 Sum_probs=53.6
Q ss_pred HHHHHHhhhhcC-CC-CCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhh-ccccCChHHHHHHHHHHHHHhC
Q 048069 88 EKITFAFRLYDL-RG-TGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSE-SELALSDDVVESIVDKTMMEAD 164 (213)
Q Consensus 88 ~~~~~~F~~fD~-d~-~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~~~~~~~~f~~~D 164 (213)
..+..+|+.||. ++ +|+|+.+| ++.++....+. .+...+++.++. ++..+|
T Consensus 8 ~~l~~~F~~~D~~dg~dG~Is~~E----------------------l~~~l~~~~g~~lg~~~s~~ei~~----~~~~~D 61 (94)
T cd05031 8 ESLILTFHRYAGKDGDKNTLSRKE----------------------LKKLMEKELSEFLKNQKDPMAVDK----IMKDLD 61 (94)
T ss_pred HHHHHHHHHHhccCCCCCeECHHH----------------------HHHHHHHHhHHHhhccccHHHHHH----HHHHhC
Confidence 568889999997 87 69999999 66666542111 244556666644 458999
Q ss_pred CCCCCcccHHHHHHHHhhCh
Q 048069 165 IKGDGKIDLEEWTEFAGRNP 184 (213)
Q Consensus 165 ~~~dg~It~~ef~~~l~~~~ 184 (213)
.+++|.|+|+||+.++...-
T Consensus 62 ~~~dg~I~f~eF~~l~~~~~ 81 (94)
T cd05031 62 QNRDGKVNFEEFVSLVAGLS 81 (94)
T ss_pred CCCCCcCcHHHHHHHHHHHH
Confidence 99999999999999886543
No 36
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=98.71 E-value=2.4e-08 Score=84.40 Aligned_cols=128 Identities=22% Similarity=0.266 Sum_probs=97.9
Q ss_pred CCCcccHHHHHHHHhhccccchHHHHHHHhhhcCCCCccccHHHHHHHHHhhCCCCchHHHHHHHhhhhcCCCCCcccHH
Q 048069 29 DDGLIHKEEFQLALLRNSSKQNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFHPSAPEAEKITFAFRLYDLRGTGYIARE 108 (213)
Q Consensus 29 ~~g~is~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~fD~d~~g~Is~~ 108 (213)
+.+.|.-.+|...+ ..........+|.+||.+++|.++|.|.+..++.++......+.++.+|++|+.+.||++...
T Consensus 240 kg~~igi~efa~~l---~vpvsd~l~~~f~LFde~~tg~~D~re~v~~lavlc~p~~t~~iiq~afk~f~v~eDg~~ge~ 316 (412)
T KOG4666|consen 240 KGPDIGIVEFAVNL---RVPVSDKLAPTFMLFDEGTTGNGDYRETVKTLAVLCGPPVTPVIIQYAFKRFSVAEDGISGEH 316 (412)
T ss_pred cCCCcceeEeeeee---ecchhhhhhhhhheecCCCCCcccHHHHhhhheeeeCCCCcHHHHHHHHHhcccccccccchH
Confidence 44555555555332 122234457899999999999999999999999999777788999999999999999999998
Q ss_pred HHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHhhChhHHh
Q 048069 109 ELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEADIKGDGKIDLEEWTEFAGRNPTILK 188 (213)
Q Consensus 109 e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dg~It~~ef~~~l~~~~~~~~ 188 (213)
+ +.-++...++.+... +..+|...+...+|+|++.+|.+++...|++..
T Consensus 317 ~----------------------ls~ilq~~lgv~~l~---------v~~lf~~i~q~d~~ki~~~~f~~fa~~~p~~a~ 365 (412)
T KOG4666|consen 317 I----------------------LSLILQVVLGVEVLR---------VPVLFPSIEQKDDPKIYASNFRKFAATEPNLAL 365 (412)
T ss_pred H----------------------HHHHHHHhcCcceee---------ccccchhhhcccCcceeHHHHHHHHHhCchhhh
Confidence 8 555555443222221 244568888888999999999999999999875
Q ss_pred hc
Q 048069 189 SM 190 (213)
Q Consensus 189 ~~ 190 (213)
+.
T Consensus 366 ~~ 367 (412)
T KOG4666|consen 366 SE 367 (412)
T ss_pred hh
Confidence 43
No 37
>KOG4251 consensus Calcium binding protein [General function prediction only]
Probab=98.71 E-value=8.8e-08 Score=78.30 Aligned_cols=145 Identities=15% Similarity=0.173 Sum_probs=105.7
Q ss_pred HHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccc----cchHHHHHHHhhhcCCCCccccHHHHHHHHHhhCCC-----
Q 048069 13 VEALYDLFKKLSSSIIDDGLIHKEEFQLALLRNSS----KQNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFHPS----- 83 (213)
Q Consensus 13 i~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~~~~----~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~----- 83 (213)
-+.|..+|.+.|.+ .+|.|+..+++..+..... ......+.-|+++|++++|.|+|+||..-+.....+
T Consensus 100 rrklmviFsKvDVN--tDrkisAkEmqrwImektaEHfqeameeSkthFraVDpdgDGhvsWdEykvkFlaskghsekev 177 (362)
T KOG4251|consen 100 RRKLMVIFSKVDVN--TDRKISAKEMQRWIMEKTAEHFQEAMEESKTHFRAVDPDGDGHVSWDEYKVKFLASKGHSEKEV 177 (362)
T ss_pred HHHHHHHHhhcccC--ccccccHHHHHHHHHHHHHHHHHHHHhhhhhheeeeCCCCCCceehhhhhhHHHhhcCcchHHH
Confidence 56788999999999 9999999999988743211 122234667999999999999999998755443210
Q ss_pred ------------------------------------------------------CchHHHHHHHhhhhcCCCCCcccHHH
Q 048069 84 ------------------------------------------------------APEAEKITFAFRLYDLRGTGYIAREE 109 (213)
Q Consensus 84 ------------------------------------------------------~~~~~~~~~~F~~fD~d~~g~Is~~e 109 (213)
+....-++.+.+.+|+||+..++..|
T Consensus 178 adairlneelkVDeEtqevlenlkdRwyqaDsppadlllteeEflsFLHPEhSrgmLrfmVkeivrdlDqdgDkqlSvpe 257 (362)
T KOG4251|consen 178 ADAIRLNEELKVDEETQEVLENLKDRWYQADSPPADLLLTEEEFLSFLHPEHSRGMLRFMVKEIVRDLDQDGDKQLSVPE 257 (362)
T ss_pred HHHhhccCcccccHHHHHHHHhhhhhhccccCchhhhhhhHHHHHHHcChHhhhhhHHHHHHHHHHHhccCCCeeecchh
Confidence 00112455667778888888888888
Q ss_pred HHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHhCCCCCCcccHHHHHHHH
Q 048069 110 LCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEADIKGDGKIDLEEWTEFA 180 (213)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dg~It~~ef~~~l 180 (213)
|..+..+- +.+. .+..+.+.+++...+++-..+|.|.||.+|.+|...++
T Consensus 258 FislpvGT--------------Venq-------qgqdiddnwvkdRkkEFeElIDsNhDGivTaeELe~y~ 307 (362)
T KOG4251|consen 258 FISLPVGT--------------VENQ-------QGQDIDDNWVKDRKKEFEELIDSNHDGIVTAEELEDYV 307 (362)
T ss_pred hhcCCCcc--------------hhhh-------hccchHHHHHHHHHHHHHHHhhcCCccceeHHHHHhhc
Confidence 76665551 1111 25677778888887777788899999999999998875
No 38
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.70 E-value=1e-07 Score=67.90 Aligned_cols=86 Identities=21% Similarity=0.269 Sum_probs=63.8
Q ss_pred hHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHhCC
Q 048069 86 EAEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEADI 165 (213)
Q Consensus 86 ~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D~ 165 (213)
....++.+|+.||.+++|.|+.+| ++.+++.. .++++++ +.++..+|.
T Consensus 8 ~~~~l~~~F~~~D~d~~G~Is~~e----------------------l~~~l~~~------~~~~~ev----~~i~~~~d~ 55 (96)
T smart00027 8 DKAKYEQIFRSLDKNQDGTVTGAQ----------------------AKPILLKS------GLPQTLL----AKIWNLADI 55 (96)
T ss_pred HHHHHHHHHHHhCCCCCCeEeHHH----------------------HHHHHHHc------CCCHHHH----HHHHHHhcC
Confidence 346789999999999999999999 88877653 3566665 455589999
Q ss_pred CCCCcccHHHHHHHHhhChhHHhhcccchhHHHHhhhhhhHhhh
Q 048069 166 KGDGKIDLEEWTEFAGRNPTILKSMTLPYLKEITLAFPSFVLHS 209 (213)
Q Consensus 166 ~~dg~It~~ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (213)
+++|.|+++||+.++..-..... -..|...+|..+-++
T Consensus 56 ~~~g~I~~~eF~~~~~~~~~~~~------g~~~~~~~~~~~~~~ 93 (96)
T smart00027 56 DNDGELDKDEFALAMHLIYRKLN------GYPIPASLPPSLIPP 93 (96)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHc------CCCCCccCCHhhcCC
Confidence 99999999999998865443332 223445577766543
No 39
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.67 E-value=8.7e-08 Score=63.05 Aligned_cols=62 Identities=27% Similarity=0.320 Sum_probs=50.5
Q ss_pred HHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHhCCCCCCc
Q 048069 91 TFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEADIKGDGK 170 (213)
Q Consensus 91 ~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dg~ 170 (213)
+.+|+.+|.+++|.|+.+| +..++... + .+++.+ +.++..+|.+++|.
T Consensus 2 ~~~F~~~D~~~~G~i~~~e----------------------l~~~l~~~----g--~~~~~~----~~i~~~~d~~~~g~ 49 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDE----------------------ARPFLGKS----G--LPRSVL----AQIWDLADTDKDGK 49 (67)
T ss_pred hHHHHHhCCCCCCcCcHHH----------------------HHHHHHHc----C--CCHHHH----HHHHHHhcCCCCCc
Confidence 4689999999999999999 77777654 3 355555 55569999999999
Q ss_pred ccHHHHHHHHhhCh
Q 048069 171 IDLEEWTEFAGRNP 184 (213)
Q Consensus 171 It~~ef~~~l~~~~ 184 (213)
|+++||+.++..-+
T Consensus 50 i~~~ef~~~~~~~~ 63 (67)
T cd00052 50 LDKEEFAIAMHLIA 63 (67)
T ss_pred CCHHHHHHHHHHHH
Confidence 99999999887654
No 40
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.66 E-value=1.2e-07 Score=66.76 Aligned_cols=69 Identities=22% Similarity=0.396 Sum_probs=53.7
Q ss_pred HHHHHhhhhcC-CC-CCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHhCCC
Q 048069 89 KITFAFRLYDL-RG-TGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEADIK 166 (213)
Q Consensus 89 ~~~~~F~~fD~-d~-~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D~~ 166 (213)
.+..+|..||. ++ +|+|+.+| |++++.... ..|...+++++++++ +..|.|
T Consensus 11 ~~i~~F~~y~~~~~~~g~Is~~E----------------------L~~~l~~~~-~lg~k~t~~ev~~m~----~~~D~d 63 (88)
T cd05029 11 LLVAIFHKYSGREGDKNTLSKKE----------------------LKELIQKEL-TIGSKLQDAEIAKLM----EDLDRN 63 (88)
T ss_pred HHHHHHHHHHccCCCCCEECHHH----------------------HHHHHHHHH-hcCCCCCHHHHHHHH----HHhcCC
Confidence 46678999998 67 89999999 777775310 126777888876555 899999
Q ss_pred CCCcccHHHHHHHHhhCh
Q 048069 167 GDGKIDLEEWTEFAGRNP 184 (213)
Q Consensus 167 ~dg~It~~ef~~~l~~~~ 184 (213)
++|.|+|+||+.++....
T Consensus 64 ~dG~Idf~EFv~lm~~l~ 81 (88)
T cd05029 64 KDQEVNFQEYVTFLGALA 81 (88)
T ss_pred CCCCCcHHHHHHHHHHHH
Confidence 999999999999887643
No 41
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.66 E-value=1.9e-07 Score=66.33 Aligned_cols=68 Identities=25% Similarity=0.481 Sum_probs=55.4
Q ss_pred HHHHHHHHHHhhc-CCCCCCC-cccHHHHHHHHhhc------cccchHHHHHHHhhhcCCCCccccHHHHHHHHHhhC
Q 048069 12 EVEALYDLFKKLS-SSIIDDG-LIHKEEFQLALLRN------SSKQNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFH 81 (213)
Q Consensus 12 ~i~~l~~~F~~~d-~~~~~~g-~is~~ef~~~l~~~------~~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~ 81 (213)
-+..+..+|..+| .+ ++| .|+..||+.++... .......++.+++.+|.+++|.|+|+||+.++..+.
T Consensus 8 a~~~~~~~F~~~dd~d--gdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l~ 83 (93)
T cd05026 8 AMDTLIRIFHNYSGKE--GDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAALT 83 (93)
T ss_pred HHHHHHHHHHHHHccC--CCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH
Confidence 3777888899999 56 888 59999999888542 122456789999999999999999999999887664
No 42
>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]
Probab=98.65 E-value=1.5e-07 Score=82.35 Aligned_cols=158 Identities=17% Similarity=0.242 Sum_probs=101.8
Q ss_pred HHHHhhcCCCCCCCcccHHHHHHHHhh------ccc--------cc--h-HHHH-HHHhhhcCCCCccccHHHHHHHHHh
Q 048069 18 DLFKKLSSSIIDDGLIHKEEFQLALLR------NSS--------KQ--N-LFAD-RIFDLFDVKRNGVIEFGEFVRSLSI 79 (213)
Q Consensus 18 ~~F~~~d~~~~~~g~is~~ef~~~l~~------~~~--------~~--~-~~~~-~lf~~~d~~~~g~I~f~ef~~~~~~ 79 (213)
-.|..+|.+ +||.|+.+||...... .+. .. . .... -+-..|..+++++++++||..+...
T Consensus 237 IAFKMFD~d--gnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~s~~~~~nsaL~~yFFG~rg~~kLs~deF~~F~e~ 314 (489)
T KOG2643|consen 237 IAFKMFDLD--GNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGNSFKVEVNSALLTYFFGKRGNGKLSIDEFLKFQEN 314 (489)
T ss_pred eeeeeeecC--CCCcccHHHHHHHHHHHHhccccceecccCccccceehhhhhhhHHHHhhccCCCccccHHHHHHHHHH
Confidence 468889999 9999999999865411 111 00 1 1111 2344577889999999999999977
Q ss_pred hCCCCchHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHH----------------HHHHHHHHHHHHHH------
Q 048069 80 FHPSAPEAEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCC----------------KYVLLLWKLKEMVV------ 137 (213)
Q Consensus 80 ~~~~~~~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~----------------~~~~~~~~l~~~l~------ 137 (213)
++ ++.++..|..+|+..+|.|+..+|..++..-++.-+- .+++++.-+++++.
T Consensus 315 Lq-----~Eil~lEF~~~~~~~~g~Ise~DFA~~lL~~a~~n~~~k~~~lkrvk~kf~~~~~gISl~Ef~~Ff~Fl~~l~ 389 (489)
T KOG2643|consen 315 LQ-----EEILELEFERFDKGDSGAISEVDFAELLLAYAGVNSKKKHKYLKRVKEKFKDDGKGISLQEFKAFFRFLNNLN 389 (489)
T ss_pred HH-----HHHHHHHHHHhCcccccccCHHHHHHHHHHHcccchHhHHHHHHHHHHhccCCCCCcCHHHHHHHHHHHhhhh
Confidence 65 4888889999999999999999998887762211000 11111111111111
Q ss_pred ------HHhhhccccCChHHHHHH-------------HHHHHHHhCCCCCCcccHHHHHHHHhh
Q 048069 138 ------SLLSESELALSDDVVESI-------------VDKTMMEADIKGDGKIDLEEWTEFAGR 182 (213)
Q Consensus 138 ------~~~~~~~~~~~~~~~~~~-------------~~~~f~~~D~~~dg~It~~ef~~~l~~ 182 (213)
.+...+|-.++..+++.. ++.+|..+|.|+||.++.+||+.+|++
T Consensus 390 dfd~Al~fy~~Ag~~i~~~~f~raa~~vtGveLSdhVvdvvF~IFD~N~Dg~LS~~EFl~Vmk~ 453 (489)
T KOG2643|consen 390 DFDIALRFYHMAGASIDEKTFQRAAKVVTGVELSDHVVDVVFTIFDENNDGTLSHKEFLAVMKR 453 (489)
T ss_pred HHHHHHHHHHHcCCCCCHHHHHHHHHHhcCcccccceeeeEEEEEccCCCCcccHHHHHHHHHH
Confidence 011223444444444332 344578999999999999999999865
No 43
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]
Probab=98.65 E-value=2.2e-07 Score=82.42 Aligned_cols=168 Identities=15% Similarity=0.223 Sum_probs=117.8
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccc--c-chHHHHHHHhhhcCCCCccccHHHHHHHHHhhCC
Q 048069 6 WAVTVNEVEALYDLFKKLSSSIIDDGLIHKEEFQLALLRNSS--K-QNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFHP 82 (213)
Q Consensus 6 ~~~s~~~i~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~~~~--~-~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~ 82 (213)
.+-.+++++.+.-.|...+.+ +..+++.++|......+.. . .+..+.-+-...|..+||-|+|+||..+-..+|.
T Consensus 28 kra~~~eLr~if~~~as~e~~--ge~~mt~edFv~~ylgL~~e~~~n~~~v~Lla~iaD~tKDglisf~eF~afe~~lC~ 105 (694)
T KOG0751|consen 28 KRADPKELRSIFLKYASIEKN--GESYMTPEDFVRRYLGLYNESNFNDKIVRLLASIADQTKDGLISFQEFRAFESVLCA 105 (694)
T ss_pred ccCChHHHHHHHHHHhHHhhc--cccccCHHHHHHHHHhhcccccCChHHHHHHHhhhhhcccccccHHHHHHHHhhccC
Confidence 445677888888888888888 8899999999876544332 2 3344455556667789999999999998887763
Q ss_pred CCchHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhcc-ccCChHHH--------H
Q 048069 83 SAPEAEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESE-LALSDDVV--------E 153 (213)
Q Consensus 83 ~~~~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~--------~ 153 (213)
++.....+|+.||+.++|.+|.+++.+++.. ...-|..+++.-.++++...+... ..++..++ +
T Consensus 106 ---pDal~~~aFqlFDr~~~~~vs~~~~~~if~~----t~l~~~~~f~~d~efI~~~Fg~~~~r~~ny~~f~Q~lh~~~~ 178 (694)
T KOG0751|consen 106 ---PDALFEVAFQLFDRLGNGEVSFEDVADIFGQ----TNLHHHIPFNWDSEFIKLHFGDIRKRHLNYAEFTQFLHEFQL 178 (694)
T ss_pred ---chHHHHHHHHHhcccCCCceehHHHHHHHhc----cccccCCCccCCcchHHHHhhhHHHHhccHHHHHHHHHHHHH
Confidence 5778889999999999999999999998877 122222233223333333322211 22333332 2
Q ss_pred HHHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 048069 154 SIVDKTMMEADIKGDGKIDLEEWTEFAGR 182 (213)
Q Consensus 154 ~~~~~~f~~~D~~~dg~It~~ef~~~l~~ 182 (213)
+-..+.|+..|+.++|.||--+|..++..
T Consensus 179 E~~~qafr~~d~~~ng~is~Ldfq~imvt 207 (694)
T KOG0751|consen 179 EHAEQAFREKDKAKNGFISVLDFQDIMVT 207 (694)
T ss_pred HHHHHHHHHhcccCCCeeeeechHhhhhh
Confidence 22456688999999999999999988865
No 44
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.64 E-value=2.2e-07 Score=65.36 Aligned_cols=69 Identities=20% Similarity=0.378 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHhhc-CCCCCCC-cccHHHHHHHHhh-----cccc-chHHHHHHHhhhcCCCCccccHHHHHHHHHhhC
Q 048069 11 NEVEALYDLFKKLS-SSIIDDG-LIHKEEFQLALLR-----NSSK-QNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFH 81 (213)
Q Consensus 11 ~~i~~l~~~F~~~d-~~~~~~g-~is~~ef~~~l~~-----~~~~-~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~ 81 (213)
.-+..+..+|+.+| .+ ++| .|+..+|+.+|.. .+.. ....++.+++.+|.+++|.|+|+||+.++..+.
T Consensus 5 ~~~~~l~~aF~~fD~~d--gdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~~~ 81 (88)
T cd05027 5 KAMVALIDVFHQYSGRE--GDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMVT 81 (88)
T ss_pred HHHHHHHHHHHHhcccC--CCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence 34778999999998 68 999 5999999998876 5543 445689999999999999999999999887654
No 45
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.62 E-value=2e-07 Score=65.18 Aligned_cols=70 Identities=29% Similarity=0.453 Sum_probs=52.7
Q ss_pred HHHHHHhhhhcC--CCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhh-ccccCChHHHHHHHHHHHHHhC
Q 048069 88 EKITFAFRLYDL--RGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSE-SELALSDDVVESIVDKTMMEAD 164 (213)
Q Consensus 88 ~~~~~~F~~fD~--d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~~~~~~~~~f~~~D 164 (213)
+.++.+|+.||. +++|.|+.+| +..++...++. .+...+...+ +.++..+|
T Consensus 8 ~~l~~~F~~~D~~~~~~G~Is~~e----------------------l~~~l~~~~g~~~~~~~~~~ei----~~i~~~~d 61 (88)
T cd00213 8 ETIIDVFHKYSGKEGDKDTLSKKE----------------------LKELLETELPNFLKNQKDPEAV----DKIMKDLD 61 (88)
T ss_pred HHHHHHHHHHhhccCCCCcCcHHH----------------------HHHHHHHHhhhhccCCCCHHHH----HHHHHHhc
Confidence 568889999999 8999999999 66666542111 1122345555 55569999
Q ss_pred CCCCCcccHHHHHHHHhhC
Q 048069 165 IKGDGKIDLEEWTEFAGRN 183 (213)
Q Consensus 165 ~~~dg~It~~ef~~~l~~~ 183 (213)
.+++|.|+|++|+.++...
T Consensus 62 ~~~~g~I~f~eF~~~~~~~ 80 (88)
T cd00213 62 VNKDGKVDFQEFLVLIGKL 80 (88)
T ss_pred cCCCCcCcHHHHHHHHHHH
Confidence 9999999999999988765
No 46
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=98.62 E-value=6.1e-07 Score=68.83 Aligned_cols=102 Identities=22% Similarity=0.271 Sum_probs=81.1
Q ss_pred HHHHHHHhhhcCCCCccccHHHHHHHHHhhCCCCchHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHH
Q 048069 51 LFADRIFDLFDVKRNGVIEFGEFVRSLSIFHPSAPEAEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLW 130 (213)
Q Consensus 51 ~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~ 130 (213)
..++..|..|+.+++|+|+++|+..++..+- -....+.+..+..-+|+++.|.|+.++
T Consensus 33 q~i~e~f~lfd~~~~g~iD~~EL~vAmralG-FE~~k~ei~kll~d~dk~~~g~i~fe~--------------------- 90 (172)
T KOG0028|consen 33 QEIKEAFELFDPDMAGKIDVEELKVAMRALG-FEPKKEEILKLLADVDKEGSGKITFED--------------------- 90 (172)
T ss_pred hhHHHHHHhhccCCCCcccHHHHHHHHHHcC-CCcchHHHHHHHHhhhhccCceechHH---------------------
Confidence 4567899999999999999999977776654 245667888899999999999999999
Q ss_pred HHHHHHHHHhhhccccCChHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 048069 131 KLKEMVVSLLSESELALSDDVVESIVDKTMMEADIKGDGKIDLEEWTEFAGR 182 (213)
Q Consensus 131 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dg~It~~ef~~~l~~ 182 (213)
+.+.+...+ +..-+.+++ ..+|+.+|.+++|+|+..+|..++..
T Consensus 91 -f~~~mt~k~---~e~dt~eEi----~~afrl~D~D~~Gkis~~~lkrvake 134 (172)
T KOG0028|consen 91 -FRRVMTVKL---GERDTKEEI----KKAFRLFDDDKTGKISQRNLKRVAKE 134 (172)
T ss_pred -HHHHHHHHH---hccCcHHHH----HHHHHcccccCCCCcCHHHHHHHHHH
Confidence 555544433 333355554 67779999999999999999998865
No 47
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.61 E-value=2.9e-07 Score=64.86 Aligned_cols=71 Identities=18% Similarity=0.371 Sum_probs=49.4
Q ss_pred HHHHHHhhh-hcCCCCC-cccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHhCC
Q 048069 88 EKITFAFRL-YDLRGTG-YIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEADI 165 (213)
Q Consensus 88 ~~~~~~F~~-fD~d~~g-~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D~ 165 (213)
..+..+|+. +|++|+| +|+.+||+.+ +...+..++ +...++.+++. +++..|.
T Consensus 9 ~~l~~~F~~y~~~dg~~~~Ls~~Elk~l------------------l~~e~~~~~---~~~~~~~~~~~----ll~~~D~ 63 (89)
T cd05023 9 ESLIAVFQKYAGKDGDSYQLSKTEFLSF------------------MNTELASFT---KNQKDPGVLDR----MMKKLDL 63 (89)
T ss_pred HHHHHHHHHHhccCCCcCeECHHHHHHH------------------HHHhhhHhh---cCCCCHHHHHH----HHHHcCC
Confidence 457789999 7788876 9999994444 222221111 22345566644 5599999
Q ss_pred CCCCcccHHHHHHHHhhC
Q 048069 166 KGDGKIDLEEWTEFAGRN 183 (213)
Q Consensus 166 ~~dg~It~~ef~~~l~~~ 183 (213)
|+||.|+|+||+.++...
T Consensus 64 d~DG~I~f~EF~~l~~~l 81 (89)
T cd05023 64 NSDGQLDFQEFLNLIGGL 81 (89)
T ss_pred CCCCcCcHHHHHHHHHHH
Confidence 999999999999988654
No 48
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=98.61 E-value=1.6e-07 Score=69.35 Aligned_cols=63 Identities=22% Similarity=0.374 Sum_probs=50.5
Q ss_pred hHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHhCC
Q 048069 86 EAEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEADI 165 (213)
Q Consensus 86 ~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D~ 165 (213)
....+.++|..+|.|++|+|+.+| |..+. + . .. +..++.+|..+|.
T Consensus 46 ~~~~l~w~F~~lD~d~DG~Ls~~E----------------------L~~~~--l----~--~~----e~~~~~f~~~~D~ 91 (116)
T cd00252 46 CKDPVGWMFNQLDGNYDGKLSHHE----------------------LAPIR--L----D--PN----EHCIKPFFESCDL 91 (116)
T ss_pred HHHHHHHHHHHHCCCCCCcCCHHH----------------------HHHHH--c----c--ch----HHHHHHHHHHHCC
Confidence 457899999999999999999999 66543 1 1 11 3335677799999
Q ss_pred CCCCcccHHHHHHHHhh
Q 048069 166 KGDGKIDLEEWTEFAGR 182 (213)
Q Consensus 166 ~~dg~It~~ef~~~l~~ 182 (213)
|+||.||++||..++.+
T Consensus 92 n~Dg~IS~~Ef~~cl~~ 108 (116)
T cd00252 92 DKDGSISLDEWCYCFIK 108 (116)
T ss_pred CCCCCCCHHHHHHHHhC
Confidence 99999999999999944
No 49
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.56 E-value=3.9e-07 Score=63.75 Aligned_cols=69 Identities=25% Similarity=0.422 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHhhcC--CCCCCCcccHHHHHHHHhh-cccc-----chHHHHHHHhhhcCCCCccccHHHHHHHHHhh
Q 048069 10 VNEVEALYDLFKKLSS--SIIDDGLIHKEEFQLALLR-NSSK-----QNLFADRIFDLFDVKRNGVIEFGEFVRSLSIF 80 (213)
Q Consensus 10 ~~~i~~l~~~F~~~d~--~~~~~g~is~~ef~~~l~~-~~~~-----~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~ 80 (213)
+++++.+...|..+|. + ++|.|+..+|..++.. .+.. ....+..++..+|.+++|.|+|++|+.++...
T Consensus 4 ~~~~~~l~~~F~~~D~~~~--~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~ 80 (88)
T cd00213 4 EKAIETIIDVFHKYSGKEG--DKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGKL 80 (88)
T ss_pred HHHHHHHHHHHHHHhhccC--CCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHH
Confidence 4678889999999999 8 9999999999988754 2211 35678999999999999999999999988665
No 50
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.54 E-value=4.1e-07 Score=59.77 Aligned_cols=61 Identities=25% Similarity=0.443 Sum_probs=50.5
Q ss_pred HHHHHhhcCCCCCCCcccHHHHHHHHhhccccchHHHHHHHhhhcCCCCccccHHHHHHHHHhh
Q 048069 17 YDLFKKLSSSIIDDGLIHKEEFQLALLRNSSKQNLFADRIFDLFDVKRNGVIEFGEFVRSLSIF 80 (213)
Q Consensus 17 ~~~F~~~d~~~~~~g~is~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~ 80 (213)
...|..+|.+ ++|.|+..++..++...+. +...++.++..+|.+++|.|+|+||+.++..+
T Consensus 2 ~~~F~~~D~~--~~G~i~~~el~~~l~~~g~-~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~~ 62 (67)
T cd00052 2 DQIFRSLDPD--GDGLISGDEARPFLGKSGL-PRSVLAQIWDLADTDKDGKLDKEEFAIAMHLI 62 (67)
T ss_pred hHHHHHhCCC--CCCcCcHHHHHHHHHHcCC-CHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 4578888888 9999999999988866653 56667889999999999999999999887654
No 51
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.54 E-value=4e-07 Score=57.78 Aligned_cols=61 Identities=44% Similarity=0.699 Sum_probs=50.3
Q ss_pred HHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHhCCCCCC
Q 048069 90 ITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEADIKGDG 169 (213)
Q Consensus 90 ~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dg 169 (213)
+..+|+.+|.+++|.|+.+| +..++..+ +...+.+.+ ..+|..+|.+++|
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e----------------------~~~~l~~~----~~~~~~~~~----~~~~~~~~~~~~~ 51 (63)
T cd00051 2 LREAFRLFDKDGDGTISADE----------------------LKAALKSL----GEGLSEEEI----DEMIREVDKDGDG 51 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHH----------------------HHHHHHHh----CCCCCHHHH----HHHHHHhCCCCCC
Confidence 56789999999999999999 77777665 566666665 4456999999999
Q ss_pred cccHHHHHHHH
Q 048069 170 KIDLEEWTEFA 180 (213)
Q Consensus 170 ~It~~ef~~~l 180 (213)
.|++++|..++
T Consensus 52 ~l~~~ef~~~~ 62 (63)
T cd00051 52 KIDFEEFLELM 62 (63)
T ss_pred eEeHHHHHHHh
Confidence 99999998875
No 52
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.54 E-value=3e-07 Score=58.26 Aligned_cols=52 Identities=35% Similarity=0.592 Sum_probs=43.0
Q ss_pred CCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhcccc-CChHHHHHHHHHHHHHhCCCCCCcccHHHHHHH
Q 048069 101 GTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELA-LSDDVVESIVDKTMMEADIKGDGKIDLEEWTEF 179 (213)
Q Consensus 101 ~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~~~~~~~~~~f~~~D~~~dg~It~~ef~~~ 179 (213)
++|.|+.++ ++.++..+ |.. ++++++ +.+|..+|.+++|.|+++||+.+
T Consensus 1 ~~G~i~~~~----------------------~~~~l~~~----g~~~~s~~e~----~~l~~~~D~~~~G~I~~~EF~~~ 50 (54)
T PF13833_consen 1 KDGKITREE----------------------FRRALSKL----GIKDLSEEEV----DRLFREFDTDGDGYISFDEFISM 50 (54)
T ss_dssp SSSEEEHHH----------------------HHHHHHHT----TSSSSCHHHH----HHHHHHHTTSSSSSEEHHHHHHH
T ss_pred CcCEECHHH----------------------HHHHHHHh----CCCCCCHHHH----HHHHHhcccCCCCCCCHHHHHHH
Confidence 479999999 77777554 666 888887 45559999999999999999998
Q ss_pred Hhh
Q 048069 180 AGR 182 (213)
Q Consensus 180 l~~ 182 (213)
+.+
T Consensus 51 ~~~ 53 (54)
T PF13833_consen 51 MQR 53 (54)
T ss_dssp HHH
T ss_pred HHh
Confidence 853
No 53
>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=98.53 E-value=2.5e-06 Score=83.76 Aligned_cols=142 Identities=20% Similarity=0.324 Sum_probs=114.5
Q ss_pred ccCCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhcc--------ccchHHHHHHHhhhcCCCCccccHHHHHH
Q 048069 4 DFWAVTVNEVEALYDLFKKLSSSIIDDGLIHKEEFQLALLRNS--------SKQNLFADRIFDLFDVKRNGVIEFGEFVR 75 (213)
Q Consensus 4 ~~~~~s~~~i~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~~~--------~~~~~~~~~lf~~~d~~~~g~I~f~ef~~ 75 (213)
.-+++|+++++...-+|+.+|.+ .+|.++.++|..+|.+.+ ..++|..+.++..+|++.+|+|+..+|..
T Consensus 2243 n~~GVtEe~L~EFs~~fkhFDke--k~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~a 2320 (2399)
T KOG0040|consen 2243 NHNGVTEEQLKEFSMMFKHFDKE--KNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPNRDGYVSLQDYMA 2320 (2399)
T ss_pred ccCCCCHHHHHHHHHHHHHhchh--hccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCCCcCcccHHHHHH
Confidence 34679999999999999999999 999999999999996643 23677889999999999999999999999
Q ss_pred HHHhhC-CCCchHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHH
Q 048069 76 SLSIFH-PSAPEAEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVES 154 (213)
Q Consensus 76 ~~~~~~-~~~~~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 154 (213)
++.... .+-...+.+..+|+.+|. +..||+.++ +.+ .+++++++-
T Consensus 2321 fmi~~ETeNI~s~~eIE~AfraL~a-~~~yvtke~----------------------~~~-----------~ltreqaef 2366 (2399)
T KOG0040|consen 2321 FMISKETENILSSEEIEDAFRALDA-GKPYVTKEE----------------------LYQ-----------NLTREQAEF 2366 (2399)
T ss_pred HHHhcccccccchHHHHHHHHHhhc-CCccccHHH----------------------HHh-----------cCCHHHHHH
Confidence 876533 233455699999999998 899999999 433 556777777
Q ss_pred HHHHHHHHhCCC----CCCcccHHHHHHHHh
Q 048069 155 IVDKTMMEADIK----GDGKIDLEEWTEFAG 181 (213)
Q Consensus 155 ~~~~~f~~~D~~----~dg~It~~ef~~~l~ 181 (213)
.+..|-...+.. --+.++|.+|.+.+-
T Consensus 2367 c~s~m~~~~e~~~~~s~q~~l~y~dfv~sl~ 2397 (2399)
T KOG0040|consen 2367 CMSKMKPYAETSSGRSDQVALDYKDFVNSLF 2397 (2399)
T ss_pred HHHHhhhhcccccCCCccccccHHHHHHHHh
Confidence 777776666653 224689999988663
No 54
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.52 E-value=7.6e-07 Score=62.58 Aligned_cols=70 Identities=19% Similarity=0.311 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHhhcCCCCC-CCcccHHHHHHHHhh---ccc-cchHHHHHHHhhhcCCCCccccHHHHHHHHHhhC
Q 048069 11 NEVEALYDLFKKLSSSIID-DGLIHKEEFQLALLR---NSS-KQNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFH 81 (213)
Q Consensus 11 ~~i~~l~~~F~~~d~~~~~-~g~is~~ef~~~l~~---~~~-~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~ 81 (213)
+.+..|...|.++|.++ + +|+|+.+||+.++.. .+. .....+..+++.+|.+++|.|+|+||+.++..+.
T Consensus 7 ~~~~~~i~~F~~y~~~~-~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l~ 81 (88)
T cd05029 7 QAIGLLVAIFHKYSGRE-GDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGALA 81 (88)
T ss_pred HHHHHHHHHHHHHHccC-CCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHH
Confidence 45778899999999832 5 889999999998852 333 3667789999999999999999999999886653
No 55
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.49 E-value=6.7e-07 Score=63.19 Aligned_cols=68 Identities=26% Similarity=0.397 Sum_probs=55.6
Q ss_pred HHHHHHHHHHhhc-CCCCCCCc-ccHHHHHHHHhh-ccc-----cchHHHHHHHhhhcCCCCccccHHHHHHHHHhhC
Q 048069 12 EVEALYDLFKKLS-SSIIDDGL-IHKEEFQLALLR-NSS-----KQNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFH 81 (213)
Q Consensus 12 ~i~~l~~~F~~~d-~~~~~~g~-is~~ef~~~l~~-~~~-----~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~ 81 (213)
-+..+.+.|+.+| .+ ++|+ |+..+++.++.. .+. .....++.+++.+|.+++|.|+|++|+.++..+.
T Consensus 7 ~~~~l~~~F~~fDd~d--g~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~~ 82 (92)
T cd05025 7 AMETLINVFHAHSGKE--GDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAALT 82 (92)
T ss_pred HHHHHHHHHHHHhccc--CCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHH
Confidence 3577889999996 88 9995 999999988854 321 2456789999999999999999999999887654
No 56
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.46 E-value=1.2e-06 Score=61.76 Aligned_cols=69 Identities=23% Similarity=0.397 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHh-hcCCCCCCC-cccHHHHHHHHhhcc------ccchHHHHHHHhhhcCCCCccccHHHHHHHHHhhC
Q 048069 11 NEVEALYDLFKK-LSSSIIDDG-LIHKEEFQLALLRNS------SKQNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFH 81 (213)
Q Consensus 11 ~~i~~l~~~F~~-~d~~~~~~g-~is~~ef~~~l~~~~------~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~ 81 (213)
+.+..|...|.. .|.+ ++| .|+.+||+..+.... ...+..++.++..+|.|++|.|+|+||+.++..+.
T Consensus 6 ~~i~~l~~~F~~y~~~d--g~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l~ 82 (89)
T cd05023 6 RCIESLIAVFQKYAGKD--GDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGLA 82 (89)
T ss_pred HHHHHHHHHHHHHhccC--CCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHH
Confidence 458889999999 6666 765 999999998885542 12346789999999999999999999999886653
No 57
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.41 E-value=1.8e-06 Score=61.30 Aligned_cols=66 Identities=21% Similarity=0.409 Sum_probs=52.6
Q ss_pred HHHHHHHHHhhcC-CCCC-CCcccHHHHHHHHhh-----ccc-cchHHHHHHHhhhcCCCCccccHHHHHHHHHhh
Q 048069 13 VEALYDLFKKLSS-SIID-DGLIHKEEFQLALLR-----NSS-KQNLFADRIFDLFDVKRNGVIEFGEFVRSLSIF 80 (213)
Q Consensus 13 i~~l~~~F~~~d~-~~~~-~g~is~~ef~~~l~~-----~~~-~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~ 80 (213)
+..+..+|..+|. + + +|.|+..+++.++.. ++. .....++.++..+|.+++|.|+|+||+.++...
T Consensus 7 ~~~l~~~F~~~D~~d--g~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~ 80 (94)
T cd05031 7 MESLILTFHRYAGKD--GDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAGL 80 (94)
T ss_pred HHHHHHHHHHHhccC--CCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 5678888999986 7 7 699999999988754 122 255678899999999999999999999877654
No 58
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.38 E-value=1.9e-06 Score=54.56 Aligned_cols=58 Identities=29% Similarity=0.373 Sum_probs=39.9
Q ss_pred HHHHhhhcCCCCccccHHHHHHHHHhhCCCCchHHHHHHHhhhhcCCCCCcccHHHHHH
Q 048069 54 DRIFDLFDVKRNGVIEFGEFVRSLSIFHPSAPEAEKITFAFRLYDLRGTGYIAREELCN 112 (213)
Q Consensus 54 ~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~fD~d~~g~Is~~e~~~ 112 (213)
..+|..+|.+++|.|++++|..++.... .....+.+..+|+.+|.+++|.|+.++|..
T Consensus 3 ~~~f~~~d~~~~g~l~~~e~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~ 60 (63)
T cd00051 3 REAFRLFDKDGDGTISADELKAALKSLG-EGLSEEEIDEMIREVDKDGDGKIDFEEFLE 60 (63)
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHHhC-CCCCHHHHHHHHHHhCCCCCCeEeHHHHHH
Confidence 4567777777777777777777776665 245556666777777777777777777443
No 59
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=98.35 E-value=4.9e-06 Score=72.62 Aligned_cols=90 Identities=29% Similarity=0.315 Sum_probs=78.3
Q ss_pred HHHHHHHhhcCCCCCCCcccHHHHHHHHhhccccchHHHHHHHhhhcCCCCccccHHHHHHHHHhhCCCCchHHHHHHHh
Q 048069 15 ALYDLFKKLSSSIIDDGLIHKEEFQLALLRNSSKQNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFHPSAPEAEKITFAF 94 (213)
Q Consensus 15 ~l~~~F~~~d~~~~~~g~is~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F 94 (213)
.....|..+|.+ .+|.++.++|++.+. ..+....++|..+|.+.||.|+.+|....+..+- .....+++..+|
T Consensus 52 ~~~~l~~~~d~~--~dg~vDy~eF~~Y~~----~~E~~l~~~F~~iD~~hdG~i~~~Ei~~~l~~~g-i~l~de~~~k~~ 124 (463)
T KOG0036|consen 52 AAKMLFSAMDAN--RDGRVDYSEFKRYLD----NKELELYRIFQSIDLEHDGKIDPNEIWRYLKDLG-IQLSDEKAAKFF 124 (463)
T ss_pred HHHHHHHhcccC--cCCcccHHHHHHHHH----HhHHHHHHHHhhhccccCCccCHHHHHHHHHHhC-CccCHHHHHHHH
Confidence 456788899999 999999999999872 3444567899999999999999999999999887 367788888999
Q ss_pred hhhcCCCCCcccHHHHH
Q 048069 95 RLYDLRGTGYIAREELC 111 (213)
Q Consensus 95 ~~fD~d~~g~Is~~e~~ 111 (213)
+..|+++++.|+.+||.
T Consensus 125 e~~d~~g~~~I~~~e~r 141 (463)
T KOG0036|consen 125 EHMDKDGKATIDLEEWR 141 (463)
T ss_pred HHhccCCCeeeccHHHH
Confidence 99999999999999943
No 60
>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]
Probab=98.35 E-value=2.1e-06 Score=68.19 Aligned_cols=104 Identities=15% Similarity=0.227 Sum_probs=79.6
Q ss_pred ccCCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccccchH-HHHHHHhhhcCCCCccccHHHHHHHHHhhCC
Q 048069 4 DFWAVTVNEVEALYDLFKKLSSSIIDDGLIHKEEFQLALLRNSSKQNL-FADRIFDLFDVKRNGVIEFGEFVRSLSIFHP 82 (213)
Q Consensus 4 ~~~~~s~~~i~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~~~~~~~~-~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~ 82 (213)
+...||..+|+....+|..+|.+ .||+|+..|++.++.+++.+... -.+.|+..+|.|.+|+|+|.||+-++.....
T Consensus 89 eF~eFsrkqIk~~~~~Fk~yDe~--rDgfIdl~ELK~mmEKLgapQTHL~lK~mikeVded~dgklSfreflLIfrkaaa 166 (244)
T KOG0041|consen 89 EFSEFSRKQIKDAESMFKQYDED--RDGFIDLMELKRMMEKLGAPQTHLGLKNMIKEVDEDFDGKLSFREFLLIFRKAAA 166 (244)
T ss_pred hhhHHHHHHHHHHHHHHHHhccc--ccccccHHHHHHHHHHhCCchhhHHHHHHHHHhhcccccchhHHHHHHHHHHHhc
Confidence 45578999999999999999999 99999999999999888876444 3589999999999999999999999887664
Q ss_pred CCchHHH-HHHHhh--hhcCCCCCcccHHH
Q 048069 83 SAPEAEK-ITFAFR--LYDLRGTGYIAREE 109 (213)
Q Consensus 83 ~~~~~~~-~~~~F~--~fD~d~~g~Is~~e 109 (213)
+....+. +...=+ ..|...-|..-...
T Consensus 167 gEL~~ds~~~~LAr~~eVDVskeGV~GAkn 196 (244)
T KOG0041|consen 167 GELQEDSGLLRLARLSEVDVSKEGVSGAKN 196 (244)
T ss_pred cccccchHHHHHHHhcccchhhhhhhhHHH
Confidence 3333222 222222 25666666555554
No 61
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.28 E-value=3e-06 Score=53.62 Aligned_cols=49 Identities=37% Similarity=0.582 Sum_probs=33.1
Q ss_pred CCcccHHHHHHHHhhccc--cchHHHHHHHhhhcCCCCccccHHHHHHHHH
Q 048069 30 DGLIHKEEFQLALLRNSS--KQNLFADRIFDLFDVKRNGVIEFGEFVRSLS 78 (213)
Q Consensus 30 ~g~is~~ef~~~l~~~~~--~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~ 78 (213)
+|.|+.++|+.++...+. .....+..+|..+|.+++|.|+|+||+.++.
T Consensus 2 ~G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~ 52 (54)
T PF13833_consen 2 DGKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQ 52 (54)
T ss_dssp SSEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHH
T ss_pred cCEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Confidence 577777777777744332 2344567777777777777777777777664
No 62
>PF14658 EF-hand_9: EF-hand domain
Probab=98.25 E-value=4.6e-06 Score=55.02 Aligned_cols=61 Identities=16% Similarity=0.351 Sum_probs=51.4
Q ss_pred HHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccc-cCChHHHHHHHHHHHHHhCCCCC-C
Q 048069 92 FAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESEL-ALSDDVVESIVDKTMMEADIKGD-G 169 (213)
Q Consensus 92 ~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~~~~~~~~~~f~~~D~~~d-g 169 (213)
.+|..||.++.|.|...+ +..+|+++ +. ..++..++.+. ++.|+++. |
T Consensus 2 ~~F~~fD~~~tG~V~v~~----------------------l~~~Lra~----~~~~p~e~~Lq~l~----~elDP~g~~~ 51 (66)
T PF14658_consen 2 TAFDAFDTQKTGRVPVSD----------------------LITYLRAV----TGRSPEESELQDLI----NELDPEGRDG 51 (66)
T ss_pred cchhhcCCcCCceEeHHH----------------------HHHHHHHH----cCCCCcHHHHHHHH----HHhCCCCCCc
Confidence 379999999999999999 88888777 43 56677776666 99999987 9
Q ss_pred cccHHHHHHHHhh
Q 048069 170 KIDLEEWTEFAGR 182 (213)
Q Consensus 170 ~It~~ef~~~l~~ 182 (213)
.|+++.|..+|+.
T Consensus 52 ~v~~d~F~~iM~~ 64 (66)
T PF14658_consen 52 SVNFDTFLAIMRD 64 (66)
T ss_pred eEeHHHHHHHHHH
Confidence 9999999999874
No 63
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=98.23 E-value=6.3e-06 Score=60.87 Aligned_cols=62 Identities=21% Similarity=0.253 Sum_probs=47.7
Q ss_pred hHHHHHHHhhhcCCCCccccHHHHHHHHHhhCCCCchHHHHHHHhhhhcCCCCCcccHHHHHHHhhc
Q 048069 50 NLFADRIFDLFDVKRNGVIEFGEFVRSLSIFHPSAPEAEKITFAFRLYDLRGTGYIAREELCNICKS 116 (213)
Q Consensus 50 ~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~ 116 (213)
...+..+|..+|.|++|.|+..|+..+. ....+..+...|+.+|.|++|.||.+||+..+..
T Consensus 47 ~~~l~w~F~~lD~d~DG~Ls~~EL~~~~-----l~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl~~ 108 (116)
T cd00252 47 KDPVGWMFNQLDGNYDGKLSHHELAPIR-----LDPNEHCIKPFFESCDLDKDGSISLDEWCYCFIK 108 (116)
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHH-----ccchHHHHHHHHHHHCCCCCCCCCHHHHHHHHhC
Confidence 3445778888888888888888888765 1344566778888888888888888888888754
No 64
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=98.22 E-value=5.8e-06 Score=58.01 Aligned_cols=67 Identities=25% Similarity=0.406 Sum_probs=49.1
Q ss_pred HHHHHHhhhhcCC--CCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCC----hHHHHHHHHHHHH
Q 048069 88 EKITFAFRLYDLR--GTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALS----DDVVESIVDKTMM 161 (213)
Q Consensus 88 ~~~~~~F~~fD~d--~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~----~~~~~~~~~~~f~ 161 (213)
..+...|+.|+.. ++|.|+.+| ++.++...+ +..++ +..+ +.+|.
T Consensus 8 ~~~~~~f~~y~~~~~~~~~Is~~E----------------------l~~ll~~~~---g~~~t~~~~~~~v----~~i~~ 58 (88)
T cd05030 8 ETIINVFHQYSVRKGHPDTLYKKE----------------------FKQLVEKEL---PNFLKKEKNQKAI----DKIFE 58 (88)
T ss_pred HHHHHHHHHHhccCCCcccCCHHH----------------------HHHHHHHHh---hHhhccCCCHHHH----HHHHH
Confidence 3466789999865 489999999 666664221 22233 4555 56669
Q ss_pred HhCCCCCCcccHHHHHHHHhhC
Q 048069 162 EADIKGDGKIDLEEWTEFAGRN 183 (213)
Q Consensus 162 ~~D~~~dg~It~~ef~~~l~~~ 183 (213)
.+|.+++|.|+|+||+.++...
T Consensus 59 ~~D~d~dG~I~f~eF~~~~~~~ 80 (88)
T cd05030 59 DLDTNQDGQLSFEEFLVLVIKV 80 (88)
T ss_pred HcCCCCCCcCcHHHHHHHHHHH
Confidence 9999999999999999988754
No 65
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=98.21 E-value=8.4e-06 Score=57.21 Aligned_cols=71 Identities=20% Similarity=0.338 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhh-cccc-c----hHHHHHHHhhhcCCCCccccHHHHHHHHHhhC
Q 048069 11 NEVEALYDLFKKLSSSIIDDGLIHKEEFQLALLR-NSSK-Q----NLFADRIFDLFDVKRNGVIEFGEFVRSLSIFH 81 (213)
Q Consensus 11 ~~i~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~-~~~~-~----~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~ 81 (213)
.-|..+...|..++...+.+|.|+..+|+.++.. .+.. . ...++.+|..+|.+++|.|+|+||+.++..+.
T Consensus 5 ~~i~~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~~~ 81 (88)
T cd05030 5 KAIETIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIKVG 81 (88)
T ss_pred HHHHHHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHH
Confidence 3477888999999876324789999999988853 2222 2 57789999999999999999999999887653
No 66
>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]
Probab=98.15 E-value=7.4e-06 Score=71.98 Aligned_cols=119 Identities=21% Similarity=0.286 Sum_probs=79.9
Q ss_pred CCCcccHHHHHHHHhhccccchHHHHHHHhhhcCCCCccccHHHHHHHHHhhCCCC--------------ch--HHHHHH
Q 048069 29 DDGLIHKEEFQLALLRNSSKQNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFHPSA--------------PE--AEKITF 92 (213)
Q Consensus 29 ~~g~is~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~--------------~~--~~~~~~ 92 (213)
.+|.|++.|.. .|..+.+.+..-....|.+||.|++|.|+-+||..+...+.... .. .-.-..
T Consensus 212 ~~GLIsfSdYi-FLlTlLS~p~~~F~IAFKMFD~dgnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~s~~~~~nsaL 290 (489)
T KOG2643|consen 212 ESGLISFSDYI-FLLTLLSIPERNFRIAFKMFDLDGNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGNSFKVEVNSAL 290 (489)
T ss_pred CCCeeeHHHHH-HHHHHHccCcccceeeeeeeecCCCCcccHHHHHHHHHHHHhccccceecccCccccceehhhhhhhH
Confidence 77888888877 44444444444457778888888888888888888775432200 00 111123
Q ss_pred HhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHhCCCCCCccc
Q 048069 93 AFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEADIKGDGKID 172 (213)
Q Consensus 93 ~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dg~It 172 (213)
.-..|-++++|.++.++ +.+++..+ -+++++--|..+|+...|.|+
T Consensus 291 ~~yFFG~rg~~kLs~de----------------------F~~F~e~L------------q~Eil~lEF~~~~~~~~g~Is 336 (489)
T KOG2643|consen 291 LTYFFGKRGNGKLSIDE----------------------FLKFQENL------------QEEILELEFERFDKGDSGAIS 336 (489)
T ss_pred HHHhhccCCCccccHHH----------------------HHHHHHHH------------HHHHHHHHHHHhCcccccccC
Confidence 44567888888888888 55555433 223345568899988889999
Q ss_pred HHHHHHHHhh
Q 048069 173 LEEWTEFAGR 182 (213)
Q Consensus 173 ~~ef~~~l~~ 182 (213)
-.+|..++..
T Consensus 337 e~DFA~~lL~ 346 (489)
T KOG2643|consen 337 EVDFAELLLA 346 (489)
T ss_pred HHHHHHHHHH
Confidence 9999988855
No 67
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=98.10 E-value=4.1e-05 Score=58.55 Aligned_cols=122 Identities=20% Similarity=0.268 Sum_probs=85.2
Q ss_pred HHHHHHhhhcCCCCccccHHHHHHHHHhhCCCCchHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHH
Q 048069 52 FADRIFDLFDVKRNGVIEFGEFVRSLSIFHPSAPEAEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWK 131 (213)
Q Consensus 52 ~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~ 131 (213)
+.++.|.++|.|+||.|+-+++...+..+-+ ...++.+..+++ ...|.|++--
T Consensus 33 EfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk-~~~d~elDaM~~----Ea~gPINft~---------------------- 85 (171)
T KOG0031|consen 33 EFKEAFNLMDQNRDGFIDKEDLRDMLASLGK-IASDEELDAMMK----EAPGPINFTV---------------------- 85 (171)
T ss_pred HHHHHHHHHhccCCCcccHHHHHHHHHHcCC-CCCHHHHHHHHH----hCCCCeeHHH----------------------
Confidence 4578899999999999999999999988875 366677776666 5678888877
Q ss_pred HHHHHHHHhhhccccCChHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHhh-----ChhHHhhc--ccchhHHHHhhhhh
Q 048069 132 LKEMVVSLLSESELALSDDVVESIVDKTMMEADIKGDGKIDLEEWTEFAGR-----NPTILKSM--TLPYLKEITLAFPS 204 (213)
Q Consensus 132 l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dg~It~~ef~~~l~~-----~~~~~~~~--~~~~~~~~~~~~~~ 204 (213)
+-.++ |+.++-...++.|-..|+.+|.++.|.|.-+.+..+|.. .++-+..| ..|--.....+|-+
T Consensus 86 FLTmf-------GekL~gtdpe~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~gDr~~~eEV~~m~r~~p~d~~G~~dy~~ 158 (171)
T KOG0031|consen 86 FLTMF-------GEKLNGTDPEEVILNAFKTFDDEGSGKIDEDYLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFDYKA 158 (171)
T ss_pred HHHHH-------HHHhcCCCHHHHHHHHHHhcCccCCCccCHHHHHHHHHHhcccCCHHHHHHHHHhCCcccCCceeHHH
Confidence 44444 333322222444788899999999999999999999976 34444444 33333334555666
Q ss_pred hHh
Q 048069 205 FVL 207 (213)
Q Consensus 205 ~~~ 207 (213)
|++
T Consensus 159 ~~~ 161 (171)
T KOG0031|consen 159 FTY 161 (171)
T ss_pred HHH
Confidence 654
No 68
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.09 E-value=3e-05 Score=54.56 Aligned_cols=68 Identities=16% Similarity=0.370 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhc-----c-ccchHHHHHHHhhhcCCCCccccHHHHHHHHHhhC
Q 048069 11 NEVEALYDLFKKLSSSIIDDGLIHKEEFQLALLRN-----S-SKQNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFH 81 (213)
Q Consensus 11 ~~i~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~~-----~-~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~ 81 (213)
..+..|...|.+++. +++.++..||+..+..- . ...+..++.+++..|.|+||.|+|.||+.++..+.
T Consensus 5 ~ai~~lI~~FhkYaG---~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~l~ 78 (91)
T cd05024 5 HSMEKMMLTFHKFAG---EKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDDCRDGKVGFQSFFSLIAGLL 78 (91)
T ss_pred HHHHHHHHHHHHHcC---CCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence 447788899999985 56799999999887431 1 12455679999999999999999999999987764
No 69
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=98.07 E-value=5.1e-06 Score=46.01 Aligned_cols=25 Identities=36% Similarity=0.538 Sum_probs=21.5
Q ss_pred HHHHHhhhhcCCCCCcccHHHHHHH
Q 048069 89 KITFAFRLYDLRGTGYIAREELCNI 113 (213)
Q Consensus 89 ~~~~~F~~fD~d~~g~Is~~e~~~~ 113 (213)
+++.+|+.||+|++|+|+.+||+++
T Consensus 1 E~~~~F~~~D~d~dG~I~~~Ef~~~ 25 (29)
T PF00036_consen 1 ELKEAFREFDKDGDGKIDFEEFKEM 25 (29)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCCHHHHHHH
Confidence 3688999999999999999995444
No 70
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=98.03 E-value=7.1e-05 Score=56.32 Aligned_cols=105 Identities=18% Similarity=0.128 Sum_probs=78.5
Q ss_pred hHHHHHHHhhhcCCCCccccHHHHHHHHHhhCCCCchHHHHHHHhhhhcCC--CCCcccHHHHHHHhhccCchhHHHHHH
Q 048069 50 NLFADRIFDLFDVKRNGVIEFGEFVRSLSIFHPSAPEAEKITFAFRLYDLR--GTGYIAREELCNICKSDTDSLCCKYVL 127 (213)
Q Consensus 50 ~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~fD~d--~~g~Is~~e~~~~~~~~~~~~~~~~~~ 127 (213)
...++.+|.+||..+||+|++.+.-+.++.+-. .+....+.++...++.+ +--.|++++|
T Consensus 10 ~~e~ke~F~lfD~~gD~ki~~~q~gdvlRalG~-nPT~aeV~k~l~~~~~~~~~~~rl~FE~f----------------- 71 (152)
T KOG0030|consen 10 MEEFKEAFLLFDRTGDGKISGSQVGDVLRALGQ-NPTNAEVLKVLGQPKRREMNVKRLDFEEF----------------- 71 (152)
T ss_pred HHHHHHHHHHHhccCcccccHHHHHHHHHHhcC-CCcHHHHHHHHcCcccchhhhhhhhHHHH-----------------
Confidence 356789999999999999999999999999885 56667788888888777 5578999994
Q ss_pred HHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 048069 128 LLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEADIKGDGKIDLEEWTEFAGR 182 (213)
Q Consensus 128 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dg~It~~ef~~~l~~ 182 (213)
--++..+.+. ....+. +++++ -++.+|+.++|.|...|++.++..
T Consensus 72 -----Lpm~q~vakn-k~q~t~---edfve-gLrvFDkeg~G~i~~aeLRhvLtt 116 (152)
T KOG0030|consen 72 -----LPMYQQVAKN-KDQGTY---EDFVE-GLRVFDKEGNGTIMGAELRHVLTT 116 (152)
T ss_pred -----HHHHHHHHhc-cccCcH---HHHHH-HHHhhcccCCcceeHHHHHHHHHH
Confidence 3333333222 222333 33332 238999999999999999999865
No 71
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]
Probab=98.02 E-value=6.8e-05 Score=67.00 Aligned_cols=102 Identities=24% Similarity=0.299 Sum_probs=78.5
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccccchHHHHHHHhhhcCCCCccccHHHHHHHHHhhCCC--
Q 048069 6 WAVTVNEVEALYDLFKKLSSSIIDDGLIHKEEFQLALLRNSSKQNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFHPS-- 83 (213)
Q Consensus 6 ~~~s~~~i~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~-- 83 (213)
.+++++.++-+..+ .|.. +||.|+++||+ ++......++......|..||..++|.++++++.+++.....+
T Consensus 69 ~~~n~~~v~Lla~i---aD~t--KDglisf~eF~-afe~~lC~pDal~~~aFqlFDr~~~~~vs~~~~~~if~~t~l~~~ 142 (694)
T KOG0751|consen 69 SNFNDKIVRLLASI---ADQT--KDGLISFQEFR-AFESVLCAPDALFEVAFQLFDRLGNGEVSFEDVADIFGQTNLHHH 142 (694)
T ss_pred ccCChHHHHHHHhh---hhhc--ccccccHHHHH-HHHhhccCchHHHHHHHHHhcccCCCceehHHHHHHHhccccccC
Confidence 34455544444332 3445 99999999999 8877777788888999999999999999999999988764321
Q ss_pred --------------------------------CchHHHHHHHhhhhcCCCCCcccHHHHHHH
Q 048069 84 --------------------------------APEAEKITFAFRLYDLRGTGYIAREELCNI 113 (213)
Q Consensus 84 --------------------------------~~~~~~~~~~F~~fD~d~~g~Is~~e~~~~ 113 (213)
.-..|..+++|+..|+.++|.||.-+|..+
T Consensus 143 ~~f~~d~efI~~~Fg~~~~r~~ny~~f~Q~lh~~~~E~~~qafr~~d~~~ng~is~Ldfq~i 204 (694)
T KOG0751|consen 143 IPFNWDSEFIKLHFGDIRKRHLNYAEFTQFLHEFQLEHAEQAFREKDKAKNGFISVLDFQDI 204 (694)
T ss_pred CCccCCcchHHHHhhhHHHHhccHHHHHHHHHHHHHHHHHHHHHHhcccCCCeeeeechHhh
Confidence 113467889999999999999999996554
No 72
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=97.93 E-value=1.5e-05 Score=44.14 Aligned_cols=27 Identities=30% Similarity=0.507 Sum_probs=21.2
Q ss_pred HHHHHhhhcCCCCccccHHHHHHHHHh
Q 048069 53 ADRIFDLFDVKRNGVIEFGEFVRSLSI 79 (213)
Q Consensus 53 ~~~lf~~~d~~~~g~I~f~ef~~~~~~ 79 (213)
++.+|+.+|.|++|.|+++||+.++..
T Consensus 2 ~~~~F~~~D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 2 LKEAFREFDKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 467888888888888888888887754
No 73
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=97.91 E-value=3.5e-05 Score=55.82 Aligned_cols=70 Identities=19% Similarity=0.426 Sum_probs=57.7
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccccchHHHHHHHhhhcCCCCccccHHHHHHHHHhh
Q 048069 7 AVTVNEVEALYDLFKKLSSSIIDDGLIHKEEFQLALLRNSSKQNLFADRIFDLFDVKRNGVIEFGEFVRSLSIF 80 (213)
Q Consensus 7 ~~s~~~i~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~ 80 (213)
++|++|.......|+.+++ ++|.|+-.+....|...+... .....++.+.|.+++|.++++||+.++..+
T Consensus 3 ~ls~~e~~~y~~~F~~l~~---~~g~isg~~a~~~f~~S~L~~-~~L~~IW~LaD~~~dG~L~~~EF~iAm~Li 72 (104)
T PF12763_consen 3 KLSPEEKQKYDQIFQSLDP---QDGKISGDQAREFFMKSGLPR-DVLAQIWNLADIDNDGKLDFEEFAIAMHLI 72 (104)
T ss_dssp --SCCHHHHHHHHHHCTSS---STTEEEHHHHHHHHHHTTSSH-HHHHHHHHHH-SSSSSEEEHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCC---CCCeEeHHHHHHHHHHcCCCH-HHHHHHHhhhcCCCCCcCCHHHHHHHHHHH
Confidence 4678899999999999985 789999999998887665444 556899999999999999999999988765
No 74
>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]
Probab=97.90 E-value=4.9e-05 Score=60.57 Aligned_cols=66 Identities=24% Similarity=0.339 Sum_probs=52.9
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHhCCCC
Q 048069 88 EKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEADIKG 167 (213)
Q Consensus 88 ~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D~~~ 167 (213)
..+..+|+.||.+.||+|+.-| |+.++..+ |.+ +-.+ -++.+++..|.|.
T Consensus 99 k~~~~~Fk~yDe~rDgfIdl~E----------------------LK~mmEKL----gap--QTHL--~lK~mikeVded~ 148 (244)
T KOG0041|consen 99 KDAESMFKQYDEDRDGFIDLME----------------------LKRMMEKL----GAP--QTHL--GLKNMIKEVDEDF 148 (244)
T ss_pred HHHHHHHHHhcccccccccHHH----------------------HHHHHHHh----CCc--hhhH--HHHHHHHHhhccc
Confidence 3577899999999999999999 99999876 322 2222 2466669999999
Q ss_pred CCcccHHHHHHHHhhC
Q 048069 168 DGKIDLEEWTEFAGRN 183 (213)
Q Consensus 168 dg~It~~ef~~~l~~~ 183 (213)
||+|++-||+=++++-
T Consensus 149 dgklSfreflLIfrka 164 (244)
T KOG0041|consen 149 DGKLSFREFLLIFRKA 164 (244)
T ss_pred ccchhHHHHHHHHHHH
Confidence 9999999999888763
No 75
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=97.88 E-value=9.7e-05 Score=52.02 Aligned_cols=69 Identities=20% Similarity=0.385 Sum_probs=48.1
Q ss_pred HHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHhCCCCC
Q 048069 89 KITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEADIKGD 168 (213)
Q Consensus 89 ~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D~~~d 168 (213)
.+..+|..|. .+.+.++..||+.++... +..++ ...-+++.+ +.+++..|.|+|
T Consensus 9 ~lI~~FhkYa-G~~~tLsk~Elk~Ll~~E--------------lp~~l-------~~~~d~~~v----d~im~~LD~n~D 62 (91)
T cd05024 9 KMMLTFHKFA-GEKNYLNRDDLQKLMEKE--------------FSEFL-------KNQNDPMAV----DKIMKDLDDCRD 62 (91)
T ss_pred HHHHHHHHHc-CCCCcCCHHHHHHHHHHH--------------hHHHH-------cCCCCHHHH----HHHHHHhCCCCC
Confidence 4556788887 556799999966664332 22222 223345555 556699999999
Q ss_pred CcccHHHHHHHHhhC
Q 048069 169 GKIDLEEWTEFAGRN 183 (213)
Q Consensus 169 g~It~~ef~~~l~~~ 183 (213)
|.|+|.||+..+...
T Consensus 63 g~vdF~EF~~Lv~~l 77 (91)
T cd05024 63 GKVGFQSFFSLIAGL 77 (91)
T ss_pred CcCcHHHHHHHHHHH
Confidence 999999999987653
No 76
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=97.83 E-value=0.00014 Score=64.41 Aligned_cols=60 Identities=35% Similarity=0.474 Sum_probs=50.0
Q ss_pred hCCCCchHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHH
Q 048069 80 FHPSAPEAEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKT 159 (213)
Q Consensus 80 ~~~~~~~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 159 (213)
+.........++.+|+.+|.+++|+|+.+| +.. ++.+
T Consensus 326 ~~~~~~~~~~l~~aF~~~D~dgdG~Is~~E----------------------~~~---------------------~~~~ 362 (391)
T PRK12309 326 LEGGEAFTHAAQEIFRLYDLDGDGFITREE----------------------WLG---------------------SDAV 362 (391)
T ss_pred hhccChhhHHHHHHHHHhCCCCCCcCcHHH----------------------HHH---------------------HHHH
Confidence 343456678899999999999999999999 521 2566
Q ss_pred HHHhCCCCCCcccHHHHHHHHhh
Q 048069 160 MMEADIKGDGKIDLEEWTEFAGR 182 (213)
Q Consensus 160 f~~~D~~~dg~It~~ef~~~l~~ 182 (213)
|..+|.|+||.|+++||...+..
T Consensus 363 F~~~D~d~DG~Is~eEf~~~~~~ 385 (391)
T PRK12309 363 FDALDLNHDGKITPEEMRAGLGA 385 (391)
T ss_pred HHHhCCCCCCCCcHHHHHHHHHH
Confidence 89999999999999999998864
No 77
>PF14658 EF-hand_9: EF-hand domain
Probab=97.76 E-value=7.6e-05 Score=49.27 Aligned_cols=59 Identities=20% Similarity=0.396 Sum_probs=46.6
Q ss_pred HHHhhhcCCCCccccHHHHHHHHHhhCCCCchHHHHHHHhhhhcCCCC-CcccHHHHHHH
Q 048069 55 RIFDLFDVKRNGVIEFGEFVRSLSIFHPSAPEAEKITFAFRLYDLRGT-GYIAREELCNI 113 (213)
Q Consensus 55 ~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~fD~d~~-g~Is~~e~~~~ 113 (213)
..|.+||.++.|.|....++.++..+....+.+..++...+.+|+++. |.|++++|+++
T Consensus 2 ~~F~~fD~~~tG~V~v~~l~~~Lra~~~~~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~i 61 (66)
T PF14658_consen 2 TAFDAFDTQKTGRVPVSDLITYLRAVTGRSPEESELQDLINELDPEGRDGSVNFDTFLAI 61 (66)
T ss_pred cchhhcCCcCCceEeHHHHHHHHHHHcCCCCcHHHHHHHHHHhCCCCCCceEeHHHHHHH
Confidence 367888888888888888888888877546777788888888888887 88888885543
No 78
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=97.62 E-value=0.0009 Score=62.77 Aligned_cols=144 Identities=19% Similarity=0.344 Sum_probs=114.3
Q ss_pred CccCCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccccchHHHHHHHhhhcCCCCccccHHHHHHHHHhhCC
Q 048069 3 SDFWAVTVNEVEALYDLFKKLSSSIIDDGLIHKEEFQLALLRNSSKQNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFHP 82 (213)
Q Consensus 3 ~~~~~~s~~~i~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~ 82 (213)
...|.+|..+...-...|..+-+ +.|+|+-.+-+.+|...+.. .+....|..+.|.|+||+++..||..++..+..
T Consensus 5 ~n~WavT~~Er~K~~~qF~~Lkp---~~gfitg~qArnfflqS~LP-~~VLaqIWALsDldkDGrmdi~EfSIAmkLi~l 80 (1118)
T KOG1029|consen 5 TNPWAVTDEERQKHDAQFGQLKP---GQGFITGDQARNFFLQSGLP-TPVLAQIWALSDLDKDGRMDIREFSIAMKLIKL 80 (1118)
T ss_pred CCccccchHHHHHHHHHHhccCC---CCCccchHhhhhhHHhcCCC-hHHHHHHHHhhhcCccccchHHHHHHHHHHHHH
Confidence 46788999999999999999976 89999999999888776644 445578999999999999999999998774311
Q ss_pred -------------------------------------------------------------------------CC-----
Q 048069 83 -------------------------------------------------------------------------SA----- 84 (213)
Q Consensus 83 -------------------------------------------------------------------------~~----- 84 (213)
++
T Consensus 81 kLqG~~lP~~LPPsll~~~~~~~p~~~p~fg~Gsls~~qpL~~a~p~~m~~s~v~~~Pv~vatvpS~~~~sl~nGplp~~ 160 (1118)
T KOG1029|consen 81 KLQGIQLPPVLPPSLLKQPPRNAPSTWPGFGMGSLSYSQPLPPAAPRRMSSSPVVGPPVSVATVPSSRHNSLPNGPLPPT 160 (1118)
T ss_pred HhcCCcCCCCCChHHhccCCcCCCCCCCccCCCCcCcCCCCCcccccccCCCccCCCCcccccCCCCCCCCCCCCCCCCC
Confidence 00
Q ss_pred -------------------------------chHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHH
Q 048069 85 -------------------------------PEAEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLK 133 (213)
Q Consensus 85 -------------------------------~~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~ 133 (213)
...-++++.|+..|+...|++|-.. -+
T Consensus 161 ~~spl~~~ss~se~~~~~~s~~q~~eWAVp~~~klKY~QlFNa~DktrsG~Lsg~q----------------------aR 218 (1118)
T KOG1029|consen 161 SNSPLPHDSSVSEGRPSIESVNQLEEWAVPQHNKLKYRQLFNALDKTRSGYLSGQQ----------------------AR 218 (1118)
T ss_pred CCCCCCCCcchhhcCccchhhhhhhhccccchhhhHHHHHhhhcccccccccccHH----------------------HH
Confidence 0123688999999999999999998 66
Q ss_pred HHHHHHhhhccccCChHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 048069 134 EMVVSLLSESELALSDDVVESIVDKTMMEADIKGDGKIDLEEWTEFAGR 182 (213)
Q Consensus 134 ~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dg~It~~ef~~~l~~ 182 (213)
.+|. ...++..++.. +....|.|+||+++-+||+-.|..
T Consensus 219 ~aL~------qS~Lpq~~LA~----IW~LsDvd~DGkL~~dEfilam~l 257 (1118)
T KOG1029|consen 219 SALG------QSGLPQNQLAH----IWTLSDVDGDGKLSADEFILAMHL 257 (1118)
T ss_pred HHHH------hcCCchhhHhh----heeeeccCCCCcccHHHHHHHHHH
Confidence 6663 35777777644 448889999999999999987743
No 79
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=97.62 E-value=7.3e-05 Score=41.79 Aligned_cols=23 Identities=39% Similarity=0.746 Sum_probs=19.5
Q ss_pred HHHHHhhhhcCCCCCcccHHHHH
Q 048069 89 KITFAFRLYDLRGTGYIAREELC 111 (213)
Q Consensus 89 ~~~~~F~~fD~d~~g~Is~~e~~ 111 (213)
+++.+|+.||.|++|+|+.+||.
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~ 23 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELR 23 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHH
T ss_pred CHHHHHHHHCCCCCCcCcHHHHH
Confidence 47889999999999999999933
No 80
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=97.50 E-value=0.00011 Score=39.10 Aligned_cols=21 Identities=38% Similarity=0.523 Sum_probs=15.3
Q ss_pred HHHhhhhcCCCCCcccHHHHH
Q 048069 91 TFAFRLYDLRGTGYIAREELC 111 (213)
Q Consensus 91 ~~~F~~fD~d~~g~Is~~e~~ 111 (213)
+.+|+.+|.|++|.|+.+||.
T Consensus 2 ~~~F~~~D~d~DG~is~~E~~ 22 (25)
T PF13202_consen 2 KDAFQQFDTDGDGKISFEEFQ 22 (25)
T ss_dssp HHHHHHHTTTSSSEEEHHHHH
T ss_pred HHHHHHHcCCCCCcCCHHHHH
Confidence 456777777788888877743
No 81
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=97.49 E-value=0.0027 Score=59.64 Aligned_cols=144 Identities=18% Similarity=0.272 Sum_probs=107.7
Q ss_pred CCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhcccc-chHHHHHHHhhhcCCCCccccHHHHHHHHHhhCCCCch
Q 048069 8 VTVNEVEALYDLFKKLSSSIIDDGLIHKEEFQLALLRNSSK-QNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFHPSAPE 86 (213)
Q Consensus 8 ~s~~~i~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~ 86 (213)
........+...|+..|.+ ++|.+++.+...++...... ....+..+|+..+..+++++.+.++..+...... .+
T Consensus 130 ~~~~~~~wi~~~~~~ad~~--~~~~~~~~~~~~~~~~~n~~l~~~~~~~~f~e~~~~~~~k~~~~~~~~~~~~~~~-rp- 205 (746)
T KOG0169|consen 130 QRSRREHWIHSIFQEADKN--KNGHMSFDEVLDLLKQLNVQLSESKARRLFKESDNSQTGKLEEEEFVKFRKELTK-RP- 205 (746)
T ss_pred hcchHHHHHHHHHHHHccc--cccccchhhHHHHHHHHHHhhhHHHHHHHHHHHHhhccceehHHHHHHHHHhhcc-Cc-
Confidence 3344456788999999999 99999999999887554322 3445678888888888999999999999988764 22
Q ss_pred HHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHhCCC
Q 048069 87 AEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEADIK 166 (213)
Q Consensus 87 ~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D~~ 166 (213)
.+...|..+-.+ .++++.++ |.+++....+ ..+.+.+.++++++.+-..-...
T Consensus 206 --ev~~~f~~~s~~-~~~ls~~~----------------------L~~Fl~~~q~--e~~~~~~~ae~ii~~~e~~k~~~ 258 (746)
T KOG0169|consen 206 --EVYFLFVQYSHG-KEYLSTDD----------------------LLRFLEEEQG--EDGATLDEAEEIIERYEPSKEFR 258 (746)
T ss_pred --hHHHHHHHHhCC-CCccCHHH----------------------HHHHHHHhcc--cccccHHHHHHHHHHhhhhhhcc
Confidence 577778777644 99999999 7777765521 24667778888875553333344
Q ss_pred CCCcccHHHHHHHHhh
Q 048069 167 GDGKIDLEEWTEFAGR 182 (213)
Q Consensus 167 ~dg~It~~ef~~~l~~ 182 (213)
+.+.++++.|.++|.+
T Consensus 259 ~~~~l~ldgF~~yL~S 274 (746)
T KOG0169|consen 259 RHGLLSLDGFTRYLFS 274 (746)
T ss_pred ccceecHHHHHHHhcC
Confidence 5677999999999976
No 82
>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]
Probab=97.47 E-value=0.00045 Score=62.23 Aligned_cols=74 Identities=23% Similarity=0.278 Sum_probs=63.6
Q ss_pred cCCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhcccc----chHHHHHHHhhhcCCCCccccHHHHHHHHHhh
Q 048069 5 FWAVTVNEVEALYDLFKKLSSSIIDDGLIHKEEFQLALLRNSSK----QNLFADRIFDLFDVKRNGVIEFGEFVRSLSIF 80 (213)
Q Consensus 5 ~~~~s~~~i~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~~~~~----~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~ 80 (213)
...+|+.|+..+.+.|.+.| + ++|+++..++..++...... ....++.+....+.+.+|.|+|++|+..+..+
T Consensus 10 ~~~~tq~El~~l~~kF~~~d-~--~~G~v~~~~l~~~f~k~~~~~g~~~~eei~~~l~~~~~~~~g~v~fe~f~~~~~~l 86 (627)
T KOG0046|consen 10 QSQLTQEELRELKEKFNKLD-D--QKGYVTVYELPDAFKKAKLPLGYFVREEIKEILGEVGVDADGRVEFEEFVGIFLNL 86 (627)
T ss_pred cccccHHHHHHHHHHHHhhc-C--CCCeeehHHhHHHHHHhcccccchhHHHHHHHHhccCCCcCCccCHHHHHHHHHhh
Confidence 46799999999999999999 7 99999999999999665433 36677889999999999999999999976554
Q ss_pred C
Q 048069 81 H 81 (213)
Q Consensus 81 ~ 81 (213)
.
T Consensus 87 ~ 87 (627)
T KOG0046|consen 87 K 87 (627)
T ss_pred h
Confidence 4
No 83
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=97.43 E-value=0.00019 Score=38.17 Aligned_cols=24 Identities=33% Similarity=0.655 Sum_probs=21.3
Q ss_pred HHHHHHhCCCCCCcccHHHHHHHH
Q 048069 157 DKTMMEADIKGDGKIDLEEWTEFA 180 (213)
Q Consensus 157 ~~~f~~~D~~~dg~It~~ef~~~l 180 (213)
+.+|+.+|.|+||.|+.+||.+++
T Consensus 2 ~~~F~~~D~d~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 2 KDAFQQFDTDGDGKISFEEFQRLV 25 (25)
T ss_dssp HHHHHHHTTTSSSEEEHHHHHHHH
T ss_pred HHHHHHHcCCCCCcCCHHHHHHHC
Confidence 567899999999999999998864
No 84
>KOG4251 consensus Calcium binding protein [General function prediction only]
Probab=97.37 E-value=0.0013 Score=54.17 Aligned_cols=136 Identities=23% Similarity=0.226 Sum_probs=90.1
Q ss_pred HHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhc--cccchHHHHHHHhhhcCCCCccccHHHHHHHHHhhC---CCCc--
Q 048069 13 VEALYDLFKKLSSSIIDDGLIHKEEFQLALLRN--SSKQNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFH---PSAP-- 85 (213)
Q Consensus 13 i~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~~--~~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~---~~~~-- 85 (213)
++.++..+-..|.. +.+-.++..+|...|... .......++.+.+.+|.+++..++-.+|+.+.-.-. ....
T Consensus 197 lenlkdRwyqaDsp-padlllteeEflsFLHPEhSrgmLrfmVkeivrdlDqdgDkqlSvpeFislpvGTVenqqgqdid 275 (362)
T KOG4251|consen 197 LENLKDRWYQADSP-PADLLLTEEEFLSFLHPEHSRGMLRFMVKEIVRDLDQDGDKQLSVPEFISLPVGTVENQQGQDID 275 (362)
T ss_pred HHhhhhhhccccCc-hhhhhhhHHHHHHHcChHhhhhhHHHHHHHHHHHhccCCCeeecchhhhcCCCcchhhhhccchH
Confidence 45566666666654 256788889999655221 122456679999999999999999999998643311 1111
Q ss_pred ---hHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHH
Q 048069 86 ---EAEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMME 162 (213)
Q Consensus 86 ---~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~ 162 (213)
.+.+.+..=..+|.|++|.+|.+| +..++.-. +..+.-.++ +.++..
T Consensus 276 dnwvkdRkkEFeElIDsNhDGivTaeE----------------------Le~y~dP~----n~~~alne~----~~~ma~ 325 (362)
T KOG4251|consen 276 DNWVKDRKKEFEELIDSNHDGIVTAEE----------------------LEDYVDPQ----NFRLALNEV----NDIMAL 325 (362)
T ss_pred HHHHHHHHHHHHHHhhcCCccceeHHH----------------------HHhhcCch----hhhhhHHHH----HHHHhh
Confidence 234455555678999999999999 55543111 122222222 455578
Q ss_pred hCCCCCCcccHHHHHHH
Q 048069 163 ADIKGDGKIDLEEWTEF 179 (213)
Q Consensus 163 ~D~~~dg~It~~ef~~~ 179 (213)
-|.+++.+++.++.++.
T Consensus 326 ~d~n~~~~Ls~eell~r 342 (362)
T KOG4251|consen 326 TDANNDEKLSLEELLER 342 (362)
T ss_pred hccCCCcccCHHHHHHH
Confidence 89999999999998764
No 85
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=97.29 E-value=0.0015 Score=47.32 Aligned_cols=69 Identities=28% Similarity=0.366 Sum_probs=54.0
Q ss_pred CchHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHh
Q 048069 84 APEAEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEA 163 (213)
Q Consensus 84 ~~~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~ 163 (213)
.........+|+..|. ++|.|+.++ .+.++. ...++.+.+ .++....
T Consensus 6 ~~e~~~y~~~F~~l~~-~~g~isg~~----------------------a~~~f~------~S~L~~~~L----~~IW~La 52 (104)
T PF12763_consen 6 PEEKQKYDQIFQSLDP-QDGKISGDQ----------------------AREFFM------KSGLPRDVL----AQIWNLA 52 (104)
T ss_dssp CCHHHHHHHHHHCTSS-STTEEEHHH----------------------HHHHHH------HTTSSHHHH----HHHHHHH
T ss_pred HHHHHHHHHHHHhcCC-CCCeEeHHH----------------------HHHHHH------HcCCCHHHH----HHHHhhh
Confidence 3456788899999985 689999999 777765 357888777 4455999
Q ss_pred CCCCCCcccHHHHHHHHhhChh
Q 048069 164 DIKGDGKIDLEEWTEFAGRNPT 185 (213)
Q Consensus 164 D~~~dg~It~~ef~~~l~~~~~ 185 (213)
|.+++|+++++||.-+|.--..
T Consensus 53 D~~~dG~L~~~EF~iAm~Li~~ 74 (104)
T PF12763_consen 53 DIDNDGKLDFEEFAIAMHLINR 74 (104)
T ss_dssp -SSSSSEEEHHHHHHHHHHHHH
T ss_pred cCCCCCcCCHHHHHHHHHHHHH
Confidence 9999999999999998865433
No 86
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=97.28 E-value=0.00074 Score=59.88 Aligned_cols=51 Identities=29% Similarity=0.395 Sum_probs=43.5
Q ss_pred chHHHHHHHhhhcCCCCccccHHHHHHHHHhhCCCCchHHHHHHHhhhhcCCCCCcccHHHHHHH
Q 048069 49 QNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFHPSAPEAEKITFAFRLYDLRGTGYIAREELCNI 113 (213)
Q Consensus 49 ~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~fD~d~~g~Is~~e~~~~ 113 (213)
....+..+|+.+|.+++|.|+.+||.. +..+|+.+|.|++|.|+.+||.++
T Consensus 332 ~~~~l~~aF~~~D~dgdG~Is~~E~~~--------------~~~~F~~~D~d~DG~Is~eEf~~~ 382 (391)
T PRK12309 332 FTHAAQEIFRLYDLDGDGFITREEWLG--------------SDAVFDALDLNHDGKITPEEMRAG 382 (391)
T ss_pred hhHHHHHHHHHhCCCCCCcCcHHHHHH--------------HHHHHHHhCCCCCCCCcHHHHHHH
Confidence 344568899999999999999999952 467899999999999999996554
No 87
>KOG4065 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.22 E-value=0.0018 Score=47.28 Aligned_cols=72 Identities=22% Similarity=0.333 Sum_probs=54.6
Q ss_pred hHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhh--hcc----ccCChHHHHHHHHHH
Q 048069 86 EAEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLS--ESE----LALSDDVVESIVDKT 159 (213)
Q Consensus 86 ~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~----~~~~~~~~~~~~~~~ 159 (213)
+++.----|++.|.|++|.|+--| +..+++-.-. +.| +-.++.+++.+++.+
T Consensus 65 peqlqfHYF~MHDldknn~lDGiE----------------------l~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~v 122 (144)
T KOG4065|consen 65 PEQLQFHYFSMHDLDKNNFLDGIE----------------------LLKAITHTHDAHDSGHEPVPLSSEAELERLIDAV 122 (144)
T ss_pred HHHHhhhhhhhhccCcCCcchHHH----------------------HHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHH
Confidence 444444568999999999999999 5444443322 222 334678999999999
Q ss_pred HHHhCCCCCCcccHHHHHHH
Q 048069 160 MMEADIKGDGKIDLEEWTEF 179 (213)
Q Consensus 160 f~~~D~~~dg~It~~ef~~~ 179 (213)
.+.-|.|+||.|+|.||.+.
T Consensus 123 L~DdDfN~DG~IDYgEflK~ 142 (144)
T KOG4065|consen 123 LDDDDFNGDGVIDYGEFLKR 142 (144)
T ss_pred hcccccCCCceeeHHHHHhh
Confidence 99999999999999999875
No 88
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=97.00 E-value=0.00055 Score=50.30 Aligned_cols=64 Identities=23% Similarity=0.397 Sum_probs=40.9
Q ss_pred CchHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHh
Q 048069 84 APEAEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEA 163 (213)
Q Consensus 84 ~~~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~ 163 (213)
......+...|..+|.|+||.|+..|+. .+...+ ...+.- ++.++...
T Consensus 50 ~~~~~~~~W~F~~LD~n~d~~L~~~El~----------------------~l~~~l------~~~e~C----~~~F~~~C 97 (113)
T PF10591_consen 50 SECKRVVHWKFCQLDRNKDGVLDRSELK----------------------PLRRPL------MPPEHC----ARPFFRSC 97 (113)
T ss_dssp GGGHHHHHHHHHHH--T-SSEE-TTTTG----------------------GGGSTT------STTGGG----HHHHHHHH
T ss_pred hhhhhhhhhhHhhhcCCCCCccCHHHHH----------------------HHHHHH------hhhHHH----HHHHHHHc
Confidence 4456788999999999999999999943 332111 111122 45667999
Q ss_pred CCCCCCcccHHHHHHH
Q 048069 164 DIKGDGKIDLEEWTEF 179 (213)
Q Consensus 164 D~~~dg~It~~ef~~~ 179 (213)
|.|+||.||..||..+
T Consensus 98 D~n~d~~Is~~EW~~C 113 (113)
T PF10591_consen 98 DVNKDGKISLDEWCNC 113 (113)
T ss_dssp -TT-SSSEEHHHHHHH
T ss_pred CCCCCCCCCHHHHccC
Confidence 9999999999999764
No 89
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=96.91 E-value=0.0035 Score=39.15 Aligned_cols=43 Identities=23% Similarity=0.495 Sum_probs=30.9
Q ss_pred HHHHHHHHhhhccccCChHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 048069 132 LKEMVVSLLSESELALSDDVVESIVDKTMMEADIKGDGKIDLEEWTEFAGR 182 (213)
Q Consensus 132 l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dg~It~~ef~~~l~~ 182 (213)
++++++.+ +..+++.-+ ..+|+..|.+++|.+..+||..++..
T Consensus 7 vk~lLk~~----NI~~~~~yA----~~LFq~~D~s~~g~Le~~Ef~~Fy~~ 49 (51)
T PF14788_consen 7 VKKLLKMM----NIEMDDEYA----RQLFQECDKSQSGRLEGEEFEEFYKR 49 (51)
T ss_dssp HHHHHHHT----T----HHHH----HHHHHHH-SSSSSEBEHHHHHHHHHH
T ss_pred HHHHHHHH----ccCcCHHHH----HHHHHHhcccCCCCccHHHHHHHHHH
Confidence 78877766 666666555 66779999999999999999998754
No 90
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=96.88 E-value=0.0016 Score=36.27 Aligned_cols=26 Identities=35% Similarity=0.521 Sum_probs=13.5
Q ss_pred HHHHHHhhcCCCCCCCcccHHHHHHHHh
Q 048069 16 LYDLFKKLSSSIIDDGLIHKEEFQLALL 43 (213)
Q Consensus 16 l~~~F~~~d~~~~~~g~is~~ef~~~l~ 43 (213)
+...|+.+|.+ ++|+|+.+||..++.
T Consensus 2 l~~~F~~~D~d--~dG~I~~~el~~~l~ 27 (31)
T PF13405_consen 2 LREAFKMFDKD--GDGFIDFEELRAILR 27 (31)
T ss_dssp HHHHHHHH-TT--SSSEEEHHHHHHHHH
T ss_pred HHHHHHHHCCC--CCCcCcHHHHHHHHH
Confidence 34455555555 555555555555543
No 91
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=96.86 E-value=0.008 Score=42.24 Aligned_cols=82 Identities=13% Similarity=0.199 Sum_probs=52.7
Q ss_pred HHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHhCCC
Q 048069 87 AEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEADIK 166 (213)
Q Consensus 87 ~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D~~ 166 (213)
.++++.+|+.+ .|++|.++...|..++.. +.++.+.+ |+..+-.-++..++..|....
T Consensus 2 ~dKyRylFsli-sd~~g~~~~~~l~~lL~d---------------~lqip~~v----gE~~aFg~~e~sv~sCF~~~~-- 59 (90)
T PF09069_consen 2 EDKYRYLFSLI-SDSNGCMDQRKLGLLLHD---------------VLQIPRAV----GEGPAFGYIEPSVRSCFQQVQ-- 59 (90)
T ss_dssp HHHHHHHHHHH-S-TTS-B-HHHHHHHHHH---------------HHHHHHHT----T-GGGGT--HHHHHHHHHHTT--
T ss_pred hHHHHHHHHHH-cCCCCCCcHHHHHHHHHH---------------HHHHHHHh----CccccccCcHHHHHHHhcccC--
Confidence 47899999999 599999999997777555 55555555 333333236677788888863
Q ss_pred CCCcccHHHHHHHHhhChhHHhhc
Q 048069 167 GDGKIDLEEWTEFAGRNPTILKSM 190 (213)
Q Consensus 167 ~dg~It~~ef~~~l~~~~~~~~~~ 190 (213)
....|+.++|+.|+...|-.+-++
T Consensus 60 ~~~~I~~~~Fl~wl~~ePq~lVWL 83 (90)
T PF09069_consen 60 LSPKITENQFLDWLMSEPQSLVWL 83 (90)
T ss_dssp T-S-B-HHHHHHHHHT--TTTTHH
T ss_pred CCCccCHHHHHHHHHhCCCeeeHH
Confidence 445799999999999999776655
No 92
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=96.79 E-value=0.0058 Score=38.18 Aligned_cols=44 Identities=20% Similarity=0.284 Sum_probs=26.0
Q ss_pred ccHHHHHHHHHhhCCCCchHHHHHHHhhhhcCCCCCcccHHHHHH
Q 048069 68 IEFGEFVRSLSIFHPSAPEAEKITFAFRLYDLRGTGYIAREELCN 112 (213)
Q Consensus 68 I~f~ef~~~~~~~~~~~~~~~~~~~~F~~fD~d~~g~Is~~e~~~ 112 (213)
++|.|...++..+- -...++-+..+|+.+|+.++|.+..+||..
T Consensus 2 msf~Evk~lLk~~N-I~~~~~yA~~LFq~~D~s~~g~Le~~Ef~~ 45 (51)
T PF14788_consen 2 MSFKEVKKLLKMMN-IEMDDEYARQLFQECDKSQSGRLEGEEFEE 45 (51)
T ss_dssp BEHHHHHHHHHHTT-----HHHHHHHHHHH-SSSSSEBEHHHHHH
T ss_pred CCHHHHHHHHHHHc-cCcCHHHHHHHHHHhcccCCCCccHHHHHH
Confidence 56677777666654 244555666677777777777777777443
No 93
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=96.74 E-value=0.0061 Score=54.20 Aligned_cols=58 Identities=26% Similarity=0.406 Sum_probs=49.9
Q ss_pred HHHHHhhhcCCCCccccHHHHHHHHHhhC---CCCchHHHHHHHhhhhcCCCCCcccHHHH
Q 048069 53 ADRIFDLFDVKRNGVIEFGEFVRSLSIFH---PSAPEAEKITFAFRLYDLRGTGYIAREEL 110 (213)
Q Consensus 53 ~~~lf~~~d~~~~g~I~f~ef~~~~~~~~---~~~~~~~~~~~~F~~fD~d~~g~Is~~e~ 110 (213)
.+.+|+.+|.|++|.|+.+||..++..+. +.....+.+...-+.+|.|+||.|+..||
T Consensus 549 LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~IDlNEf 609 (631)
T KOG0377|consen 549 LETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKIDLNEF 609 (631)
T ss_pred HHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcccHHHH
Confidence 47899999999999999999999877653 34456778888899999999999999994
No 94
>KOG4347 consensus GTPase-activating protein VRP [General function prediction only]
Probab=96.67 E-value=0.0093 Score=55.21 Aligned_cols=106 Identities=28% Similarity=0.441 Sum_probs=80.3
Q ss_pred CCccCCCCHHHHHHHHHHHHhhcCC-CCC--C---------CcccHHHHHHHHhhccc--cchHHHHHHHhhhcCCCCcc
Q 048069 2 VSDFWAVTVNEVEALYDLFKKLSSS-IID--D---------GLIHKEEFQLALLRNSS--KQNLFADRIFDLFDVKRNGV 67 (213)
Q Consensus 2 ~~~~~~~s~~~i~~l~~~F~~~d~~-~~~--~---------g~is~~ef~~~l~~~~~--~~~~~~~~lf~~~d~~~~g~ 67 (213)
+.....+|..++..|+++|...=.. +.+ . .+++...|...+..+.- ....+..++|+..|.+.+|.
T Consensus 492 ~~~~~~lt~~dL~~lYd~f~~e~~~~~~~~~~~~p~~~~~eqyi~~~~f~~~f~~l~pw~~s~~~~~rlF~l~D~s~~g~ 571 (671)
T KOG4347|consen 492 VVQTTSLTNTDLENLYDLFKEEHLTNSIGLGRSDPDFEAFEQYIDYAQFLEVFRELLPWAVSLIFLERLFRLLDDSMTGL 571 (671)
T ss_pred hcccCccCHHHHHHHHHHHHHHHhccCcccCCCCCCchHHHHHHHHhhHHHHhhccCchhHHHHHHHHHHHhcccCCcce
Confidence 5677889999999999999863211 001 1 12444445544432221 24556799999999999999
Q ss_pred ccHHHHHHHHHhhCCCCchHHHHHHHhhhhcCCCCCcccHHH
Q 048069 68 IEFGEFVRSLSIFHPSAPEAEKITFAFRLYDLRGTGYIAREE 109 (213)
Q Consensus 68 I~f~ef~~~~~~~~~~~~~~~~~~~~F~~fD~d~~g~Is~~e 109 (213)
|+|.+++..+..++ .+..-++++.+|+++|.+++ ....++
T Consensus 572 Ltf~~lv~gL~~l~-~~~~~ek~~l~y~lh~~p~~-~~d~e~ 611 (671)
T KOG4347|consen 572 LTFKDLVSGLSILK-AGDALEKLKLLYKLHDPPAD-ELDREE 611 (671)
T ss_pred eEHHHHHHHHHHHH-hhhHHHHHHHHHhhccCCcc-cccccc
Confidence 99999999999998 47888999999999999999 888888
No 95
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=96.58 E-value=0.0019 Score=47.41 Aligned_cols=65 Identities=23% Similarity=0.299 Sum_probs=44.5
Q ss_pred ccccchHHHHHHHhhhcCCCCccccHHHHHHHHHhhCCCCchHHHHHHHhhhhcCCCCCcccHHHHHH
Q 048069 45 NSSKQNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFHPSAPEAEKITFAFRLYDLRGTGYIAREELCN 112 (213)
Q Consensus 45 ~~~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~fD~d~~g~Is~~e~~~ 112 (213)
........+.-.|...|.|++|.|+-.|+..+...+.+ .+.=++..|+.+|.|+||.||..||..
T Consensus 48 ~~~~~~~~~~W~F~~LD~n~d~~L~~~El~~l~~~l~~---~e~C~~~F~~~CD~n~d~~Is~~EW~~ 112 (113)
T PF10591_consen 48 SYSECKRVVHWKFCQLDRNKDGVLDRSELKPLRRPLMP---PEHCARPFFRSCDVNKDGKISLDEWCN 112 (113)
T ss_dssp TGGGGHHHHHHHHHHH--T-SSEE-TTTTGGGGSTTST---TGGGHHHHHHHH-TT-SSSEEHHHHHH
T ss_pred chhhhhhhhhhhHhhhcCCCCCccCHHHHHHHHHHHhh---hHHHHHHHHHHcCCCCCCCCCHHHHcc
Confidence 33445566788899999999999999998887765532 333467788999999999999999753
No 96
>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=96.58 E-value=0.0048 Score=61.73 Aligned_cols=70 Identities=20% Similarity=0.322 Sum_probs=52.3
Q ss_pred HHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhh---ccccCChHHHHHHHHHHHHHhCC
Q 048069 89 KITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSE---SELALSDDVVESIVDKTMMEADI 165 (213)
Q Consensus 89 ~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~---~~~~~~~~~~~~~~~~~f~~~D~ 165 (213)
+...+|+.||++.+|.++..+ ++..++++... ...+-++.++++++ ...|+
T Consensus 2254 EFs~~fkhFDkek~G~Ldhq~----------------------F~sCLrslgY~lpmvEe~~~~p~fe~~l----d~vDP 2307 (2399)
T KOG0040|consen 2254 EFSMMFKHFDKEKNGRLDHQH----------------------FKSCLRSLGYDLPMVEEGEPEPEFEEIL----DLVDP 2307 (2399)
T ss_pred HHHHHHHHhchhhccCCcHHH----------------------HHHHHHhcCCCCcccccCCCChhHHHHH----HhcCC
Confidence 456789999999999999999 66666665211 01122334565554 99999
Q ss_pred CCCCcccHHHHHHHHhhCh
Q 048069 166 KGDGKIDLEEWTEFAGRNP 184 (213)
Q Consensus 166 ~~dg~It~~ef~~~l~~~~ 184 (213)
+.+|+|+..+|+.+|.++.
T Consensus 2308 ~r~G~Vsl~dY~afmi~~E 2326 (2399)
T KOG0040|consen 2308 NRDGYVSLQDYMAFMISKE 2326 (2399)
T ss_pred CCcCcccHHHHHHHHHhcc
Confidence 9999999999999997743
No 97
>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]
Probab=96.38 E-value=0.028 Score=50.29 Aligned_cols=93 Identities=22% Similarity=0.298 Sum_probs=55.0
Q ss_pred HHHHHhhcCCCCCCCcccHHHHHHHHhhccc-cc---------------hHHHHHHHhhhcCCCCccccHHHHHHH----
Q 048069 17 YDLFKKLSSSIIDDGLIHKEEFQLALLRNSS-KQ---------------NLFADRIFDLFDVKRNGVIEFGEFVRS---- 76 (213)
Q Consensus 17 ~~~F~~~d~~~~~~g~is~~ef~~~l~~~~~-~~---------------~~~~~~lf~~~d~~~~g~I~f~ef~~~---- 76 (213)
-+.+..++.. +.|++...+|...|..+-. .+ ...+.++|-.++....|+|+..+....
T Consensus 177 ~~~v~~l~~~--~~~yl~q~df~~~Lqeli~Thpl~~l~~~pEf~~~Y~~tvi~rIFy~~nrs~tG~iti~el~~snll~ 254 (493)
T KOG2562|consen 177 EQFVNLLIQA--GCSYLRQDDFKPYLQELIATHPLEFLDEEPEFQERYAETVIQRIFYYLNRSRTGRITIQELLRSNLLD 254 (493)
T ss_pred HHHHHHHhcc--CccceeccccHHHHHHHHhcCCchhhccChhHHHHHHHHHhhhhheeeCCccCCceeHHHHHHhHHHH
Confidence 3455566666 7888888877776633211 11 111467888888888999998887653
Q ss_pred -HHhhCCCCc--------hHHHHHHH---hhhhcCCCCCcccHHHHH
Q 048069 77 -LSIFHPSAP--------EAEKITFA---FRLYDLRGTGYIAREELC 111 (213)
Q Consensus 77 -~~~~~~~~~--------~~~~~~~~---F~~fD~d~~g~Is~~e~~ 111 (213)
+........ .-+....+ |-.+|+|++|.|+.+++.
T Consensus 255 ~l~~l~eEed~nq~~~~FS~e~f~viy~kFweLD~Dhd~lidk~~L~ 301 (493)
T KOG2562|consen 255 ALLELDEEEDINQVTRYFSYEHFYVIYCKFWELDTDHDGLIDKEDLK 301 (493)
T ss_pred HHHHHHHHhhhhhhhhheeHHHHHHHHHHHhhhccccccccCHHHHH
Confidence 222211000 01122222 566699999999999933
No 98
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=96.01 E-value=0.011 Score=30.64 Aligned_cols=26 Identities=35% Similarity=0.574 Sum_probs=22.9
Q ss_pred HHHHHHhCCCCCCcccHHHHHHHHhh
Q 048069 157 DKTMMEADIKGDGKIDLEEWTEFAGR 182 (213)
Q Consensus 157 ~~~f~~~D~~~dg~It~~ef~~~l~~ 182 (213)
+.+|+.+|.+++|.|++.+|..+++.
T Consensus 3 ~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 3 KEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred HHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 56779999999999999999998864
No 99
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=95.98 E-value=0.027 Score=38.55 Aligned_cols=69 Identities=23% Similarity=0.397 Sum_probs=49.1
Q ss_pred HHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHhCCCCCC
Q 048069 90 ITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEADIKGDG 169 (213)
Q Consensus 90 ~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dg 169 (213)
+..+|+.+.. +.+.||.++ +.++|...-+ ...++.+.+..++...-........+
T Consensus 2 i~~if~~ys~-~~~~mt~~~----------------------f~~FL~~eQ~--~~~~~~~~~~~li~~~~~~~~~~~~~ 56 (83)
T PF09279_consen 2 IEEIFRKYSS-DKEYMTAEE----------------------FRRFLREEQG--EPRLTDEQAKELIEKFEPDERNRQKG 56 (83)
T ss_dssp HHHHHHHHCT-TSSSEEHHH----------------------HHHHHHHTSS---TTSSHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHhC-CCCcCCHHH----------------------HHHHHHHHhc--cccCcHHHHHHHHHHHccchhhcccC
Confidence 6778999965 899999999 7777764421 12567888877775543322223568
Q ss_pred cccHHHHHHHHhhC
Q 048069 170 KIDLEEWTEFAGRN 183 (213)
Q Consensus 170 ~It~~ef~~~l~~~ 183 (213)
.+|+++|..+|.+.
T Consensus 57 ~lt~~gF~~fL~S~ 70 (83)
T PF09279_consen 57 QLTLEGFTRFLFSD 70 (83)
T ss_dssp EEEHHHHHHHHHST
T ss_pred CcCHHHHHHHHCCC
Confidence 99999999999764
No 100
>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]
Probab=95.94 E-value=0.026 Score=51.28 Aligned_cols=66 Identities=21% Similarity=0.377 Sum_probs=50.1
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHhCCCC
Q 048069 88 EKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEADIKG 167 (213)
Q Consensus 88 ~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D~~~ 167 (213)
..++..|...| +++|+|+..| +..++... +... -..+++.++.+....+.|.
T Consensus 19 ~~l~~kF~~~d-~~~G~v~~~~----------------------l~~~f~k~----~~~~-g~~~~eei~~~l~~~~~~~ 70 (627)
T KOG0046|consen 19 RELKEKFNKLD-DQKGYVTVYE----------------------LPDAFKKA----KLPL-GYFVREEIKEILGEVGVDA 70 (627)
T ss_pred HHHHHHHHhhc-CCCCeeehHH----------------------hHHHHHHh----cccc-cchhHHHHHHHHhccCCCc
Confidence 35677899999 9999999999 77777655 3222 2233444566669999999
Q ss_pred CCcccHHHHHHHHh
Q 048069 168 DGKIDLEEWTEFAG 181 (213)
Q Consensus 168 dg~It~~ef~~~l~ 181 (213)
+|.|++++|+.++.
T Consensus 71 ~g~v~fe~f~~~~~ 84 (627)
T KOG0046|consen 71 DGRVEFEEFVGIFL 84 (627)
T ss_pred CCccCHHHHHHHHH
Confidence 99999999999653
No 101
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=95.53 E-value=0.015 Score=30.07 Aligned_cols=24 Identities=42% Similarity=0.660 Sum_probs=20.3
Q ss_pred HHHHhhhhcCCCCCcccHHHHHHH
Q 048069 90 ITFAFRLYDLRGTGYIAREELCNI 113 (213)
Q Consensus 90 ~~~~F~~fD~d~~g~Is~~e~~~~ 113 (213)
++.+|+.+|.+++|.|+..+|..+
T Consensus 2 ~~~~f~~~d~~~~g~i~~~e~~~~ 25 (29)
T smart00054 2 LKEAFRLFDKDGDGKIDFEEFKDL 25 (29)
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHH
Confidence 567899999999999999994443
No 102
>KOG4578 consensus Uncharacterized conserved protein, contains KAZAL and TY domains [General function prediction only]
Probab=95.51 E-value=0.0085 Score=51.35 Aligned_cols=70 Identities=21% Similarity=0.316 Sum_probs=55.6
Q ss_pred HHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHhCCC
Q 048069 87 AEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEADIK 166 (213)
Q Consensus 87 ~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D~~ 166 (213)
+..+.+-|..+|+|.++.|...||+- ++.++... ..+..-.+.+|+.-|.|
T Consensus 332 eRvv~w~F~qLdkN~nn~i~rrEwKp-------------------FK~~l~k~----------s~~rkC~rk~~~yCDlN 382 (421)
T KOG4578|consen 332 ERVVHWYFNQLDKNSNNDIERREWKP-------------------FKRVLLKK----------SKPRKCSRKFFKYCDLN 382 (421)
T ss_pred hheeeeeeeeecccccCccchhhcch-------------------HHHHHHhh----------ccHHHHhhhcchhcccC
Confidence 33688899999999999999999665 66665432 22333457788999999
Q ss_pred CCCcccHHHHHHHHhhChh
Q 048069 167 GDGKIDLEEWTEFAGRNPT 185 (213)
Q Consensus 167 ~dg~It~~ef~~~l~~~~~ 185 (213)
+|.+|+++||+.++...++
T Consensus 383 kDKkISl~Ew~~CL~~~~~ 401 (421)
T KOG4578|consen 383 KDKKISLDEWRGCLGVEKE 401 (421)
T ss_pred CCceecHHHHhhhhccccc
Confidence 9999999999999987665
No 103
>PLN02952 phosphoinositide phospholipase C
Probab=95.26 E-value=0.18 Score=47.21 Aligned_cols=95 Identities=16% Similarity=0.253 Sum_probs=66.9
Q ss_pred CCccccHHHHHHHHHhhCC-CCchHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhh
Q 048069 64 RNGVIEFGEFVRSLSIFHP-SAPEAEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSE 142 (213)
Q Consensus 64 ~~g~I~f~ef~~~~~~~~~-~~~~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 142 (213)
+.|.++|++|..+.+.+.. ...+...+..+|..+-. +++.|+.++ |.+++...-++
T Consensus 13 ~~g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~-~~~~mt~~~----------------------l~~FL~~~Q~e 69 (599)
T PLN02952 13 DSGSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSV-GGGHMGADQ----------------------LRRFLVLHQDE 69 (599)
T ss_pred cCCCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhC-CCCccCHHH----------------------HHHHHHHhCCC
Confidence 3589999999998887752 34467889999999964 447899999 77777654221
Q ss_pred ccccCChHHHHHHHHHHHHHhC---CCCCCcccHHHHHHHHhhC
Q 048069 143 SELALSDDVVESIVDKTMMEAD---IKGDGKIDLEEWTEFAGRN 183 (213)
Q Consensus 143 ~~~~~~~~~~~~~~~~~f~~~D---~~~dg~It~~ef~~~l~~~ 183 (213)
...+.+.++.+++.++.... ..+.+.++++.|..++...
T Consensus 70 --~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~F~~~l~s~ 111 (599)
T PLN02952 70 --LDCTLAEAQRIVEEVINRRHHVTRYTRHGLNLDDFFHFLLYD 111 (599)
T ss_pred --cCCCHHHHHHHHHHHHhhccccccccccCcCHHHHHHHHcCc
Confidence 23566667777666554432 1233469999999999753
No 104
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=94.25 E-value=0.12 Score=35.30 Aligned_cols=57 Identities=16% Similarity=0.185 Sum_probs=30.8
Q ss_pred HHHHHhhhcCCCCccccHHHHHHHHHhhCCC-CchHHHHHHHhhhhcCC----CCCcccHHHH
Q 048069 53 ADRIFDLFDVKRNGVIEFGEFVRSLSIFHPS-APEAEKITFAFRLYDLR----GTGYIAREEL 110 (213)
Q Consensus 53 ~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~-~~~~~~~~~~F~~fD~d----~~g~Is~~e~ 110 (213)
++.+|..+.. +.+.|+.++|..++...++. ....+.+..+++.|.++ ..+.+|.+.|
T Consensus 2 i~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF 63 (83)
T PF09279_consen 2 IEEIFRKYSS-DKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDERNRQKGQLTLEGF 63 (83)
T ss_dssp HHHHHHHHCT-TSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHH
T ss_pred HHHHHHHHhC-CCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccchhhcccCCcCHHHH
Confidence 3455555544 45566666666666555532 12355555666666433 3566666663
No 105
>KOG4065 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.23 E-value=0.23 Score=36.48 Aligned_cols=66 Identities=20% Similarity=0.371 Sum_probs=40.1
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhh-----------ccccchHHHHHH----HhhhcCCCCccccH
Q 048069 6 WAVTVNEVEALYDLFKKLSSSIIDDGLIHKEEFQLALLR-----------NSSKQNLFADRI----FDLFDVKRNGVIEF 70 (213)
Q Consensus 6 ~~~s~~~i~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~-----------~~~~~~~~~~~l----f~~~d~~~~g~I~f 70 (213)
-.+|+++++ ...|...|-+ +++.++--|+.+++.. .+.....+.+++ .+--|.|++|.|+|
T Consensus 61 a~mtpeqlq--fHYF~MHDld--knn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDY 136 (144)
T KOG4065|consen 61 AKMTPEQLQ--FHYFSMHDLD--KNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDY 136 (144)
T ss_pred hhCCHHHHh--hhhhhhhccC--cCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeH
Confidence 346666654 3347777777 8888888888888732 111222233333 33345667888888
Q ss_pred HHHHH
Q 048069 71 GEFVR 75 (213)
Q Consensus 71 ~ef~~ 75 (213)
.||+.
T Consensus 137 gEflK 141 (144)
T KOG4065|consen 137 GEFLK 141 (144)
T ss_pred HHHHh
Confidence 88865
No 106
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=93.41 E-value=0.24 Score=42.70 Aligned_cols=96 Identities=14% Similarity=0.116 Sum_probs=73.9
Q ss_pred HHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccc--cchHHHHHHHhhhcCCCCccccHHHHHHHHHhhCCCCchHHHHH
Q 048069 14 EALYDLFKKLSSSIIDDGLIHKEEFQLALLRNSS--KQNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFHPSAPEAEKIT 91 (213)
Q Consensus 14 ~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~~~~--~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~ 91 (213)
..+...|..+|.+ ++|.++..+-..++.-+.. .....++--|..|+...||.++-.++..++.... +...-.+-
T Consensus 259 d~l~~~f~LFde~--~tg~~D~re~v~~lavlc~p~~t~~iiq~afk~f~v~eDg~~ge~~ls~ilq~~l--gv~~l~v~ 334 (412)
T KOG4666|consen 259 DKLAPTFMLFDEG--TTGNGDYRETVKTLAVLCGPPVTPVIIQYAFKRFSVAEDGISGEHILSLILQVVL--GVEVLRVP 334 (412)
T ss_pred hhhhhhhheecCC--CCCcccHHHHhhhheeeeCCCCcHHHHHHHHHhcccccccccchHHHHHHHHHhc--Ccceeecc
Confidence 3466778888888 9999999887777633322 2445568889999999999999988888777654 44555567
Q ss_pred HHhhhhcCCCCCcccHHHHHHH
Q 048069 92 FAFRLYDLRGTGYIAREELCNI 113 (213)
Q Consensus 92 ~~F~~fD~d~~g~Is~~e~~~~ 113 (213)
-.|+..+...+|.|+.++|+.+
T Consensus 335 ~lf~~i~q~d~~ki~~~~f~~f 356 (412)
T KOG4666|consen 335 VLFPSIEQKDDPKIYASNFRKF 356 (412)
T ss_pred ccchhhhcccCcceeHHHHHHH
Confidence 7899999999999999995544
No 107
>KOG0039 consensus Ferric reductase, NADH/NADPH oxidase and related proteins [Inorganic ion transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=93.02 E-value=0.28 Score=46.56 Aligned_cols=96 Identities=28% Similarity=0.402 Sum_probs=74.0
Q ss_pred CccccHHHHHHHHHhhCCCCchHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhcc
Q 048069 65 NGVIEFGEFVRSLSIFHPSAPEAEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESE 144 (213)
Q Consensus 65 ~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 144 (213)
++ ++++|+. ...+..+.+++..|.++|. ++|.++.++ +..++........
T Consensus 2 ~~-~~~~~~~------~~~~~~d~~l~~~f~~~~~-~~~~~~~~~----------------------~~~~~~~~~~~~~ 51 (646)
T KOG0039|consen 2 EG-ISFQELK------ITDCSYDDKLQTFFDMYDK-GDGKLTEEE----------------------VRELIMSSISANW 51 (646)
T ss_pred CC-cchhhhc------ccCCChhHHHHHHHHHHhh-hcCCccHHH----------------------HHHHHHHHHHhhh
Confidence 56 8999998 3357889999999999997 999999999 4444444433333
Q ss_pred ccCChHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHhhChhHHhhc
Q 048069 145 LALSDDVVESIVDKTMMEADIKGDGKIDLEEWTEFAGRNPTILKSM 190 (213)
Q Consensus 145 ~~~~~~~~~~~~~~~f~~~D~~~dg~It~~ef~~~l~~~~~~~~~~ 190 (213)
.....+...++...++...|.+..|.++++++...+...|......
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~ll~~~~~~~~~~ 97 (646)
T KOG0039|consen 52 LSLIKKQTEEYAALIMEELDPDHKGYITNEDLEILLLQIPTLLFAI 97 (646)
T ss_pred hhhhhhhhhHHHHHhhhhccccccceeeecchhHHHHhchHHHHHH
Confidence 4444566677777888999999999999999999999888666543
No 108
>KOG1955 consensus Ral-GTPase effector RALBP1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=93.02 E-value=0.32 Score=44.15 Aligned_cols=76 Identities=18% Similarity=0.364 Sum_probs=63.4
Q ss_pred CCccCCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccccchHHHHHHHhhhcCCCCccccHHHHHHHHHhh
Q 048069 2 VSDFWAVTVNEVEALYDLFKKLSSSIIDDGLIHKEEFQLALLRNSSKQNLFADRIFDLFDVKRNGVIEFGEFVRSLSIF 80 (213)
Q Consensus 2 ~~~~~~~s~~~i~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~ 80 (213)
+..-|.+|+++.++.-..|+.+.++ .+|.|+-.--+..+.+... +-.+..-|+++.|.++||.+++.||+.++..+
T Consensus 219 ~d~pw~IT~EQReYYvnQFrtvQpD--p~gfisGsaAknFFtKSkl-pi~ELshIWeLsD~d~DGALtL~EFcAAfHLV 294 (737)
T KOG1955|consen 219 LDTPWQITPEQREYYVNQFRTVQPD--PHGFISGSAAKNFFTKSKL-PIEELSHIWELSDVDRDGALTLSEFCAAFHLV 294 (737)
T ss_pred cCCccccCHHHHHHHHhhhhcccCC--cccccccHHHHhhhhhccC-chHHHHHHHhhcccCccccccHHHHHhhHhhe
Confidence 3456889999999999999999999 9999998888877755432 34455789999999999999999999988764
No 109
>KOG1707 consensus Predicted Ras related/Rac-GTP binding protein [Defense mechanisms]
Probab=92.93 E-value=1.2 Score=41.31 Aligned_cols=155 Identities=15% Similarity=0.151 Sum_probs=94.9
Q ss_pred ccCCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhh-ccccch-H---HHHHHHhhhcCC--CCccccHHHHHHH
Q 048069 4 DFWAVTVNEVEALYDLFKKLSSSIIDDGLIHKEEFQLALLR-NSSKQN-L---FADRIFDLFDVK--RNGVIEFGEFVRS 76 (213)
Q Consensus 4 ~~~~~s~~~i~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~-~~~~~~-~---~~~~lf~~~d~~--~~g~I~f~ef~~~ 76 (213)
....+.+.-++.+..+|...|.+ .+|.++-.|+...=.. ...+.. . .++...+..-.+ .+..++...|+-+
T Consensus 185 ~~qelkp~~v~al~RIFki~D~d--~D~~Lsd~Eln~fQ~~CF~~pl~p~~l~~vk~vv~e~~p~gv~~~~ltl~GFLfL 262 (625)
T KOG1707|consen 185 EEQELKPRCVKALKRIFKISDSD--NDGALSDAELNDFQKKCFNTPLDPQELEDVKNVVQEICPDGVYERGLTLPGFLFL 262 (625)
T ss_pred ccccccHHHHHHHHHHHhhhccc--cccccchhhhhHHHHHhcCCCCCHHHHHHHHHHHHhhcCchhhhccccccchHHH
Confidence 45668888899999999999999 9999999998843222 222211 1 223333332223 2566888888888
Q ss_pred HHhhCCCCchHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhcc--ccCChHHHHH
Q 048069 77 LSIFHPSAPEAEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESE--LALSDDVVES 154 (213)
Q Consensus 77 ~~~~~~~~~~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~--~~~~~~~~~~ 154 (213)
...+...+-.+..|. +.+.|--+.+-.++.+= +.- .+-..++ .++++.-+ .
T Consensus 263 ~~lfiergr~EttW~-iLR~fgY~DsleL~~~~----------------------l~p---~~~~~p~~s~ELs~~~~-~ 315 (625)
T KOG1707|consen 263 NTLFIERGRHETTWT-ILRKFGYTDSLELTDEY----------------------LPP---RLKVPPDQSVELSPKGY-R 315 (625)
T ss_pred HHHHHHhccccchhh-hhhhcCCcchhhhhhhh----------------------cCc---cccCCCCcceeccHHHH-H
Confidence 777765555554443 55666333222222221 110 0001111 24444433 4
Q ss_pred HHHHHHHHhCCCCCCcccHHHHHHHHhhChhHH
Q 048069 155 IVDKTMMEADIKGDGKIDLEEWTEFAGRNPTIL 187 (213)
Q Consensus 155 ~~~~~f~~~D~~~dg~It~~ef~~~l~~~~~~~ 187 (213)
++..+|..+|.++||.++-+|+...+...|...
T Consensus 316 Fl~~~f~~~D~d~Dg~L~p~El~~LF~~~P~~p 348 (625)
T KOG1707|consen 316 FLVDVFEKFDRDNDGALSPEELKDLFSTAPGSP 348 (625)
T ss_pred HHHHHHHhccCCCCCCcCHHHHHHHhhhCCCCC
Confidence 557888999999999999999998888877654
No 110
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=92.63 E-value=1.5 Score=41.77 Aligned_cols=121 Identities=22% Similarity=0.258 Sum_probs=86.5
Q ss_pred chHHHHHHHhhhcCCCCccccHHHHHHHHHhhCCCCchHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHH
Q 048069 49 QNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFHPSAPEAEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLL 128 (213)
Q Consensus 49 ~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~ 128 (213)
...++..+|...|.+++|.+++.+-..++..+. .......++..|+..+..+++.+..+++..+...+.. .+ .
T Consensus 134 ~~~wi~~~~~~ad~~~~~~~~~~~~~~~~~~~n-~~l~~~~~~~~f~e~~~~~~~k~~~~~~~~~~~~~~~----rp-e- 206 (746)
T KOG0169|consen 134 REHWIHSIFQEADKNKNGHMSFDEVLDLLKQLN-VQLSESKARRLFKESDNSQTGKLEEEEFVKFRKELTK----RP-E- 206 (746)
T ss_pred HHHHHHHHHHHHccccccccchhhHHHHHHHHH-HhhhHHHHHHHHHHHHhhccceehHHHHHHHHHhhcc----Cc-h-
Confidence 566778999999999999999999999988876 3667788899999999899999999997776555211 11 1
Q ss_pred HHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHhhChhH
Q 048069 129 LWKLKEMVVSLLSESELALSDDVVESIVDKTMMEADIKGDGKIDLEEWTEFAGRNPTI 186 (213)
Q Consensus 129 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dg~It~~ef~~~l~~~~~~ 186 (213)
+..++...... +..++..++..+++ .. .+.+.++.+++.+++......
T Consensus 207 ---v~~~f~~~s~~-~~~ls~~~L~~Fl~----~~--q~e~~~~~~~ae~ii~~~e~~ 254 (746)
T KOG0169|consen 207 ---VYFLFVQYSHG-KEYLSTDDLLRFLE----EE--QGEDGATLDEAEEIIERYEPS 254 (746)
T ss_pred ---HHHHHHHHhCC-CCccCHHHHHHHHH----Hh--cccccccHHHHHHHHHHhhhh
Confidence 44444444332 45666777766653 22 455668888888887655433
No 111
>KOG3866 consensus DNA-binding protein of the nucleobindin family [General function prediction only]
Probab=92.06 E-value=0.38 Score=41.23 Aligned_cols=72 Identities=19% Similarity=0.325 Sum_probs=48.3
Q ss_pred HHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHH-------HHHHHHHH
Q 048069 90 ITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVES-------IVDKTMME 162 (213)
Q Consensus 90 ~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~-------~~~~~f~~ 162 (213)
-+..|.+.|.|++|.++-.|+.++ +..-+..+. ++.-.++.+.+ +-+.++..
T Consensus 246 PKTFF~LHD~NsDGfldeqELEaL------------------FtkELEKvY---dpkNeeDDM~EmeEErlRMREHVMk~ 304 (442)
T KOG3866|consen 246 PKTFFALHDLNSDGFLDEQELEAL------------------FTKELEKVY---DPKNEEDDMKEMEEERLRMREHVMKQ 304 (442)
T ss_pred cchheeeeccCCcccccHHHHHHH------------------HHHHHHHhc---CCCCcchHHHHHHHHHHHHHHHHHHh
Confidence 355788899999999999996666 333333332 22222222222 33456788
Q ss_pred hCCCCCCcccHHHHHHHHhh
Q 048069 163 ADIKGDGKIDLEEWTEFAGR 182 (213)
Q Consensus 163 ~D~~~dg~It~~ef~~~l~~ 182 (213)
.|.|.|..||++||++.-.+
T Consensus 305 vDtNqDRlvtleEFL~~t~~ 324 (442)
T KOG3866|consen 305 VDTNQDRLVTLEEFLNDTDN 324 (442)
T ss_pred cccchhhhhhHHHHHhhhhh
Confidence 99999999999999987644
No 112
>KOG3555 consensus Ca2+-binding proteoglycan Testican [General function prediction only]
Probab=91.79 E-value=0.5 Score=41.04 Aligned_cols=104 Identities=18% Similarity=0.162 Sum_probs=73.1
Q ss_pred CCCCHHHHHH----HHHHHHhhcCCCCCCCcccHHHHHHHHhhccc----cchHHHHHHHhhhcCCCCccccHHHHHHHH
Q 048069 6 WAVTVNEVEA----LYDLFKKLSSSIIDDGLIHKEEFQLALLRNSS----KQNLFADRIFDLFDVKRNGVIEFGEFVRSL 77 (213)
Q Consensus 6 ~~~s~~~i~~----l~~~F~~~d~~~~~~g~is~~ef~~~l~~~~~----~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~ 77 (213)
...|..++.+ |.+.|..+-.+ .++......+..+-....+ .....+.-||+..|.|.++.++-.|...+-
T Consensus 199 ~~Ct~qeL~~lg~RL~dWF~~lhe~--s~~~~~~ss~~~~~~~~d~s~~p~CKds~gWMFnklD~N~Dl~Ld~sEl~~I~ 276 (434)
T KOG3555|consen 199 YACTDQELRRLGNRLRDWFKALHED--SSQNDKTSSLHSAASGFDTSILPICKDSLGWMFNKLDTNYDLLLDQSELRAIE 276 (434)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHhh--hhccCcchhhcccccccccccCcchhhhhhhhhhccccccccccCHHHhhhhh
Confidence 4578888775 56788887666 5555555544433211111 234456889999999999999999977654
Q ss_pred HhhCCCCchHHHHHHHhhhhcCCCCCcccHHHHHHHhhc
Q 048069 78 SIFHPSAPEAEKITFAFRLYDLRGTGYIAREELCNICKS 116 (213)
Q Consensus 78 ~~~~~~~~~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~ 116 (213)
....+.=++-.|..+|...+|.|+-.||+.-+.+
T Consensus 277 -----ldknE~CikpFfnsCD~~kDg~iS~~EWC~CF~k 310 (434)
T KOG3555|consen 277 -----LDKNEACIKPFFNSCDTYKDGSISTNEWCYCFQK 310 (434)
T ss_pred -----ccCchhHHHHHHhhhcccccCccccchhhhhhcc
Confidence 2334556788999999999999999997765443
No 113
>KOG0035 consensus Ca2+-binding actin-bundling protein (actinin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=91.60 E-value=1 Score=43.78 Aligned_cols=102 Identities=19% Similarity=0.167 Sum_probs=78.3
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccccchH---HHHHHHhhh---cCCCCccccHHHHHHHHHh
Q 048069 6 WAVTVNEVEALYDLFKKLSSSIIDDGLIHKEEFQLALLRNSSKQNL---FADRIFDLF---DVKRNGVIEFGEFVRSLSI 79 (213)
Q Consensus 6 ~~~s~~~i~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~~~~~~~~---~~~~lf~~~---d~~~~g~I~f~ef~~~~~~ 79 (213)
...++.++..+...|...+.. ..|.++.++|+.++..++-.... .....|+++ |.+.-|.++|.+|...+..
T Consensus 739 k~~sQ~v~~ElrAle~~~~~~--d~~aa~~e~~~~~Lmslg~~~e~ee~~~~e~~~lvn~~n~l~~~qv~~~e~~ddl~R 816 (890)
T KOG0035|consen 739 KGTSQYVLDELRALENEQDKI--DGGAASPEELLRCLMSLGYNTEEEEQGIAEWFRLVNKKNPLIQGQVQLLEFEDDLER 816 (890)
T ss_pred cchhHHHHHHHHHHHhHHHHh--hcccCCHHHHHHHHHhcCcccchhHHHHHHHHHHHhccCcccccceeHHHHHhHhhh
Confidence 345667777888888888877 88899999999999877655332 234555554 4445589999999999988
Q ss_pred hCCCCchHHHHHHHhhhhcCCCCCcccHHHH
Q 048069 80 FHPSAPEAEKITFAFRLYDLRGTGYIAREEL 110 (213)
Q Consensus 80 ~~~~~~~~~~~~~~F~~fD~d~~g~Is~~e~ 110 (213)
-......+.++..+|+.+-++.. +|..+|+
T Consensus 817 ~~e~l~~~~r~i~s~~d~~ktk~-~lL~eEL 846 (890)
T KOG0035|consen 817 EYEDLDTELRAILAFEDWAKTKA-YLLLEEL 846 (890)
T ss_pred hhhhhcHHHHHHHHHHHHHcchh-HHHHHHH
Confidence 77667788899999999977666 8999993
No 114
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=91.43 E-value=0.33 Score=46.28 Aligned_cols=72 Identities=25% Similarity=0.413 Sum_probs=58.4
Q ss_pred cCCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccccchHHHHHHHhhhcCCCCccccHHHHHHHHHh
Q 048069 5 FWAVTVNEVEALYDLFKKLSSSIIDDGLIHKEEFQLALLRNSSKQNLFADRIFDLFDVKRNGVIEFGEFVRSLSI 79 (213)
Q Consensus 5 ~~~~s~~~i~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~ 79 (213)
.|.+....-....++|+.+|.. .+|++|-.+=+.+|...+.....+ -.|..+-|.|+||+++-+||+-++..
T Consensus 186 eWAVp~~~klKY~QlFNa~Dkt--rsG~Lsg~qaR~aL~qS~Lpq~~L-A~IW~LsDvd~DGkL~~dEfilam~l 257 (1118)
T KOG1029|consen 186 EWAVPQHNKLKYRQLFNALDKT--RSGYLSGQQARSALGQSGLPQNQL-AHIWTLSDVDGDGKLSADEFILAMHL 257 (1118)
T ss_pred hccccchhhhHHHHHhhhcccc--cccccccHHHHHHHHhcCCchhhH-hhheeeeccCCCCcccHHHHHHHHHH
Confidence 3455555666788999999999 999999999999987776555444 56788899999999999999987653
No 115
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=91.01 E-value=0.84 Score=35.89 Aligned_cols=41 Identities=10% Similarity=0.021 Sum_probs=34.4
Q ss_pred HHHHHHHHhCCCCCCcccHHHHHHHHhhChhHHhhcccchh
Q 048069 155 IVDKTMMEADIKGDGKIDLEEWTEFAGRNPTILKSMTLPYL 195 (213)
Q Consensus 155 ~~~~~f~~~D~~~dg~It~~ef~~~l~~~~~~~~~~~~~~~ 195 (213)
.++.+|+.++..+.+.+|+.|..+++..+.+....+|+...
T Consensus 97 kFe~iF~kya~~~~d~LT~~E~~~m~~~nr~~~D~~GW~a~ 137 (174)
T PF05042_consen 97 KFEEIFSKYAKTGPDALTLRELWRMLKGNRNANDPFGWFAA 137 (174)
T ss_pred HHHHHHHHhCCCCCCCcCHHHHHHHHHhccccCCcchhhhh
Confidence 45777899998888899999999999999988888776543
No 116
>KOG3555 consensus Ca2+-binding proteoglycan Testican [General function prediction only]
Probab=90.31 E-value=0.46 Score=41.26 Aligned_cols=65 Identities=18% Similarity=0.303 Sum_probs=50.9
Q ss_pred chHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHhC
Q 048069 85 PEAEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEAD 164 (213)
Q Consensus 85 ~~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D 164 (213)
.-.+.+-++|..+|.|.+|.++..| +..+ ...-++.- |+-+|..-|
T Consensus 247 ~CKds~gWMFnklD~N~Dl~Ld~sE----------------------l~~I--------~ldknE~C----ikpFfnsCD 292 (434)
T KOG3555|consen 247 ICKDSLGWMFNKLDTNYDLLLDQSE----------------------LRAI--------ELDKNEAC----IKPFFNSCD 292 (434)
T ss_pred chhhhhhhhhhccccccccccCHHH----------------------hhhh--------hccCchhH----HHHHHhhhc
Confidence 3467899999999999999999999 5443 12222333 466679999
Q ss_pred CCCCCcccHHHHHHHHhhC
Q 048069 165 IKGDGKIDLEEWTEFAGRN 183 (213)
Q Consensus 165 ~~~dg~It~~ef~~~l~~~ 183 (213)
..+||.|+-.||..++.+.
T Consensus 293 ~~kDg~iS~~EWC~CF~k~ 311 (434)
T KOG3555|consen 293 TYKDGSISTNEWCYCFQKS 311 (434)
T ss_pred ccccCccccchhhhhhccC
Confidence 9999999999999998763
No 117
>KOG1265 consensus Phospholipase C [Lipid transport and metabolism]
Probab=89.54 E-value=4.4 Score=39.63 Aligned_cols=125 Identities=14% Similarity=0.262 Sum_probs=79.8
Q ss_pred CCCcccHHHHHHHHhhccccchHHHHHHHhhhc--CCCC-----ccccHHHHHHHHHhhCCCCchHHHHHHHhhhhcCCC
Q 048069 29 DDGLIHKEEFQLALLRNSSKQNLFADRIFDLFD--VKRN-----GVIEFGEFVRSLSIFHPSAPEAEKITFAFRLYDLRG 101 (213)
Q Consensus 29 ~~g~is~~ef~~~l~~~~~~~~~~~~~lf~~~d--~~~~-----g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~fD~d~ 101 (213)
..|.|-...+.+.+.... .+..++....... .+++ ...+++.|..++..+++ +.++..+|+.+..++
T Consensus 161 ~~grip~knI~k~F~~~k--~~KrVe~al~~~gLp~~k~dsI~~d~f~~e~f~~~l~klcp----R~eie~iF~ki~~~~ 234 (1189)
T KOG1265|consen 161 FEGRIPVKNIIKTFSADK--KEKRVEKALEACGLPSGKNDSIEPDDFTLEKFYRLLNKLCP----RPEIEEIFRKISGKK 234 (1189)
T ss_pred ccccccHHHHHHHhhcCC--chhHHHHHHHhcCCCCCCcCccChhhccHHHHHHHHHhcCC----chhHHHHHHHhccCC
Confidence 567777766666552221 1233333333322 1121 23567788888888874 356888999999888
Q ss_pred CCcccHHHHHHHhhc---cCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHhCCC----CCCcccHH
Q 048069 102 TGYIAREELCNICKS---DTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEADIK----GDGKIDLE 174 (213)
Q Consensus 102 ~g~Is~~e~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D~~----~dg~It~~ 174 (213)
.-++|.++|..++.. ||- |..++ -+...+..+..+| ..+..| .+|.|+-+
T Consensus 235 kpylT~~ql~dfln~~QrDpR------------LNeil-------fp~~~~~r~~~li----ekyEp~~~~a~~gqms~d 291 (1189)
T KOG1265|consen 235 KPYLTKEQLVDFLNKKQRDPR------------LNEIL-------FPPADPRRIQSLI----EKYEPNSDNAEKGQMSTD 291 (1189)
T ss_pred CccccHHHHHHHHhhhccCcc------------hhhhh-------cCCCCHHHHHHHH----HHcCCchhhhhccccchh
Confidence 899999995555432 222 33333 3566777877777 666554 46899999
Q ss_pred HHHHHHhh
Q 048069 175 EWTEFAGR 182 (213)
Q Consensus 175 ef~~~l~~ 182 (213)
-|+.+++.
T Consensus 292 gf~ryl~g 299 (1189)
T KOG1265|consen 292 GFVRYLMG 299 (1189)
T ss_pred hhHHHhhC
Confidence 99999988
No 118
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=89.32 E-value=6.1 Score=31.11 Aligned_cols=63 Identities=13% Similarity=0.196 Sum_probs=43.5
Q ss_pred HHHHHhhhcCCCCccccHHHHHHHHHhhCCCCc------hHHHHHHHhhhhcCCCCCcccHHHHHHHhhc
Q 048069 53 ADRIFDLFDVKRNGVIEFGEFVRSLSIFHPSAP------EAEKITFAFRLYDLRGTGYIAREELCNICKS 116 (213)
Q Consensus 53 ~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~------~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~ 116 (213)
.+++|..++..+.+.+++.|...++.....-.+ ..-++...|.+. .+.+|.+.+|++..+..+
T Consensus 98 Fe~iF~kya~~~~d~LT~~E~~~m~~~nr~~~D~~GW~a~~~EW~~~y~L~-~d~dG~l~Ke~iR~vYDG 166 (174)
T PF05042_consen 98 FEEIFSKYAKTGPDALTLRELWRMLKGNRNANDPFGWFAAFFEWGALYILA-KDKDGFLSKEDIRGVYDG 166 (174)
T ss_pred HHHHHHHhCCCCCCCcCHHHHHHHHHhccccCCcchhhhhhhHHHHHHHHH-cCcCCcEeHHHHhhhcch
Confidence 578888888877788999999988877442111 133556666665 577899999995544443
No 119
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=89.16 E-value=2.3 Score=32.85 Aligned_cols=67 Identities=18% Similarity=0.268 Sum_probs=47.4
Q ss_pred HHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhcccc----chHHHHHHHhhhcCCCCccccHHHHHHHHHhhC
Q 048069 13 VEALYDLFKKLSSSIIDDGLIHKEEFQLALLRNSSK----QNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFH 81 (213)
Q Consensus 13 i~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~~~~~----~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~ 81 (213)
++.++..|..+... +...|+-..|.+++...... ....+..+|..+-..+...|+|++|..++..+.
T Consensus 1 L~~~F~~f~~fG~~--~~~~m~~~~F~Kl~kD~~i~d~k~t~tdvDiiF~Kvk~k~~~~I~f~~F~~aL~~lA 71 (154)
T PF05517_consen 1 LEAVFKAFASFGKK--NGTEMDSKNFAKLCKDCGIIDKKLTSTDVDIIFSKVKAKGARKITFEQFLEALAELA 71 (154)
T ss_dssp HHHHHHHHHCSSTS--TSSEEEHHHHHHHHHHTSS--SSS-HHHHHHHHHHHT-SS-SEEEHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCC--ccccccHHHHHHHHHHcCCCCCCCchHHHHHHHHHhhcCCCcccCHHHHHHHHHHHH
Confidence 35566667666644 66789999999988654432 344568899998777777899999999987654
No 120
>KOG4578 consensus Uncharacterized conserved protein, contains KAZAL and TY domains [General function prediction only]
Probab=88.28 E-value=0.43 Score=41.18 Aligned_cols=57 Identities=19% Similarity=0.187 Sum_probs=47.3
Q ss_pred HHHHHhhhcCCCCccccHHHHHHHHHhhCCCCchHHHHHHHhhhhcCCCCCcccHHH
Q 048069 53 ADRIFDLFDVKRNGVIEFGEFVRSLSIFHPSAPEAEKITFAFRLYDLRGTGYIAREE 109 (213)
Q Consensus 53 ~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~fD~d~~g~Is~~e 109 (213)
+.-.|...|.|+++.|+-.|+..+-..+.....+..=.+.+|+.+|.|+|..||..|
T Consensus 335 v~w~F~qLdkN~nn~i~rrEwKpFK~~l~k~s~~rkC~rk~~~yCDlNkDKkISl~E 391 (421)
T KOG4578|consen 335 VHWYFNQLDKNSNNDIERREWKPFKRVLLKKSKPRKCSRKFFKYCDLNKDKKISLDE 391 (421)
T ss_pred eeeeeeeecccccCccchhhcchHHHHHHhhccHHHHhhhcchhcccCCCceecHHH
Confidence 345688999999999998888777666665555667788899999999999999999
No 121
>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=87.95 E-value=1.9 Score=40.08 Aligned_cols=81 Identities=15% Similarity=0.112 Sum_probs=67.9
Q ss_pred cCCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhcc-ccchHHHHHHHhhhcCCCCccccHHHHHHHHHhhCCC
Q 048069 5 FWAVTVNEVEALYDLFKKLSSSIIDDGLIHKEEFQLALLRNS-SKQNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFHPS 83 (213)
Q Consensus 5 ~~~~s~~~i~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~~~-~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~ 83 (213)
.-.+++.+++..+..|..+|.+ +.|+++..+..+.|.... ..+.....++.+..+.+.+|.+...||..+++....+
T Consensus 584 ~i~~~~~~~~~~~~rf~~lD~~--k~~~~~i~~v~~vlk~~~~~~d~~~~~~~l~ea~~~~~g~v~l~e~~q~~s~~~~g 661 (680)
T KOG0042|consen 584 PIKLTPEDFLRRKTRFAFLDAD--KKAYQAIADVLKVLKSENVGWDEDRLHEELQEADENLNGFVELREFLQLMSAIKNG 661 (680)
T ss_pred ccccCHHHHHHHHHHHHhhcch--HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhcceeeHHHHHHHHHHHhcC
Confidence 3458999999999999999999 999999999999987665 3456667888888888889999999999999998864
Q ss_pred CchH
Q 048069 84 APEA 87 (213)
Q Consensus 84 ~~~~ 87 (213)
.+..
T Consensus 662 ~~~~ 665 (680)
T KOG0042|consen 662 CTEG 665 (680)
T ss_pred ChHH
Confidence 4443
No 122
>KOG4286 consensus Dystrophin-like protein [Cell motility; Signal transduction mechanisms; Cytoskeleton]
Probab=86.33 E-value=7.8 Score=37.24 Aligned_cols=150 Identities=12% Similarity=0.137 Sum_probs=97.8
Q ss_pred HHHHHHHhhcCCCCCCCcccHHHHHHHHhh----------ccccc----hHHHHHHHhhhcCCCCccccHHHHHHHHHhh
Q 048069 15 ALYDLFKKLSSSIIDDGLIHKEEFQLALLR----------NSSKQ----NLFADRIFDLFDVKRNGVIEFGEFVRSLSIF 80 (213)
Q Consensus 15 ~l~~~F~~~d~~~~~~g~is~~ef~~~l~~----------~~~~~----~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~ 80 (213)
-+.++|+.++... +...++..+...+|.. ..... +--..-+.+.||...+|.|..-+|...+..+
T Consensus 421 l~l~if~~h~l~~-~~e~m~~~~~i~~L~~~y~~l~e~~g~~v~v~l~vD~~lN~llNvyD~~R~g~irvls~ki~~i~l 499 (966)
T KOG4286|consen 421 LALDALDQHNLKQ-NDQPMDILQIINCLTTIYDRLEQEHGNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKIGIISL 499 (966)
T ss_pred HHHHHHHHhcccc-cCcCCCHHHHHHHHHHHHHHHHHHcccccccchHHHHHHHHHHHhcccCCCcceEEeeehhhHHHH
Confidence 3445666665541 4456666665555422 11111 1112567889999999999999999999999
Q ss_pred CCCCchHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhh---ccccCChHHHHHHHH
Q 048069 81 HPSAPEAEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSE---SELALSDDVVESIVD 157 (213)
Q Consensus 81 ~~~~~~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~---~~~~~~~~~~~~~~~ 157 (213)
+ +...+++++.+|+.....+.-.+ ...|..++.- +.++.+.+... +|..+.+. ++
T Consensus 500 c-k~~leek~~ylF~~vA~~~sq~~-q~~l~lLL~d---------------liqipr~lGE~aAfGgsNveps-----vr 557 (966)
T KOG4286|consen 500 C-KAHLEDKYRYLFKQVASSTSQCD-QRRLGLLLHD---------------LIQIPRQLGEVAAFGGSNIEPS-----VR 557 (966)
T ss_pred h-cchhHHHHHHHHHHHcCchhhHH-HHHHHHHHHH---------------HHHHHHHHhHHHhhcCCCCChH-----HH
Confidence 9 48889999999999976655554 5554444333 55665555322 23444444 46
Q ss_pred HHHHHhCCCCCCcccHHHHHHHHhhChhHHhh
Q 048069 158 KTMMEADIKGDGKIDLEEWTEFAGRNPTILKS 189 (213)
Q Consensus 158 ~~f~~~D~~~dg~It~~ef~~~l~~~~~~~~~ 189 (213)
..|+.. ++-..|+...|+.|+..-|-..-+
T Consensus 558 sCF~~v--~~~pei~~~~f~dw~~~epqsmVw 587 (966)
T KOG4286|consen 558 SCFQFV--NNKPEIEAALFLDWMRLEPQSMVW 587 (966)
T ss_pred HHHHhc--CCCCcchHHHHHHHhccCcchhhH
Confidence 667743 444579999999999998876655
No 123
>KOG1955 consensus Ral-GTPase effector RALBP1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=85.03 E-value=2.5 Score=38.66 Aligned_cols=64 Identities=19% Similarity=0.249 Sum_probs=51.4
Q ss_pred hHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHhCC
Q 048069 86 EAEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEADI 165 (213)
Q Consensus 86 ~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D~ 165 (213)
.++-+-.-|+..-.|-+|.|+-.- -++++.+ .+++-.++ .+|....|.
T Consensus 229 QReYYvnQFrtvQpDp~gfisGsa----------------------AknFFtK------Sklpi~EL----shIWeLsD~ 276 (737)
T KOG1955|consen 229 QREYYVNQFRTVQPDPHGFISGSA----------------------AKNFFTK------SKLPIEEL----SHIWELSDV 276 (737)
T ss_pred HHHHHHhhhhcccCCcccccccHH----------------------HHhhhhh------ccCchHHH----HHHHhhccc
Confidence 345566678888999999999998 7888763 46666655 666689999
Q ss_pred CCCCcccHHHHHHHHh
Q 048069 166 KGDGKIDLEEWTEFAG 181 (213)
Q Consensus 166 ~~dg~It~~ef~~~l~ 181 (213)
++||.+|+.||...+.
T Consensus 277 d~DGALtL~EFcAAfH 292 (737)
T KOG1955|consen 277 DRDGALTLSEFCAAFH 292 (737)
T ss_pred CccccccHHHHHhhHh
Confidence 9999999999999874
No 124
>KOG4347 consensus GTPase-activating protein VRP [General function prediction only]
Probab=84.89 E-value=2.1 Score=40.12 Aligned_cols=78 Identities=23% Similarity=0.261 Sum_probs=49.9
Q ss_pred ccHHHHHHHHHhhCCCCchHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccC
Q 048069 68 IEFGEFVRSLSIFHPSAPEAEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELAL 147 (213)
Q Consensus 68 I~f~ef~~~~~~~~~~~~~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 147 (213)
|+|..|...+....+-......+..+|+.+|.+++|.|+..++ ...+..+.
T Consensus 535 i~~~~f~~~f~~l~pw~~s~~~~~rlF~l~D~s~~g~Ltf~~l----------------------v~gL~~l~------- 585 (671)
T KOG4347|consen 535 IDYAQFLEVFRELLPWAVSLIFLERLFRLLDDSMTGLLTFKDL----------------------VSGLSILK------- 585 (671)
T ss_pred HHHhhHHHHhhccCchhHHHHHHHHHHHhcccCCcceeEHHHH----------------------HHHHHHHH-------
Confidence 4455555555554433344556788999999999999999994 33332221
Q ss_pred ChHHHHHHHHHHHHHhCCCCCCcccHHHH
Q 048069 148 SDDVVESIVDKTMMEADIKGDGKIDLEEW 176 (213)
Q Consensus 148 ~~~~~~~~~~~~f~~~D~~~dg~It~~ef 176 (213)
..+.. +.++-+|+.+|.+++ ....++-
T Consensus 586 ~~~~~-ek~~l~y~lh~~p~~-~~d~e~~ 612 (671)
T KOG4347|consen 586 AGDAL-EKLKLLYKLHDPPAD-ELDREEV 612 (671)
T ss_pred hhhHH-HHHHHHHhhccCCcc-ccccccc
Confidence 11222 234778899998888 7777665
No 125
>KOG0998 consensus Synaptic vesicle protein EHS-1 and related EH domain proteins [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=84.63 E-value=1.5 Score=43.02 Aligned_cols=71 Identities=24% Similarity=0.422 Sum_probs=56.2
Q ss_pred cCCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccccchHHHHHHHhhhcCCCCccccHHHHHHHHHh
Q 048069 5 FWAVTVNEVEALYDLFKKLSSSIIDDGLIHKEEFQLALLRNSSKQNLFADRIFDLFDVKRNGVIEFGEFVRSLSI 79 (213)
Q Consensus 5 ~~~~s~~~i~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~ 79 (213)
...++.++.......|..+.+ ++|.++-..-+.++...... .....++....|.+.+|.+++.||...+..
T Consensus 120 ~p~~~~qe~aky~q~f~s~~p---~~g~~sg~~~~pil~~s~Lp-~~~l~~iw~l~d~d~~g~Ld~~ef~~am~l 190 (847)
T KOG0998|consen 120 VPAITPQEQAKYDQIFRSLSP---SNGLLSGDKAKPILLNSKLP-SDVLGRIWELSDIDKDGNLDRDEFAVAMHL 190 (847)
T ss_pred CCCCCHHHHHHHHHHHhccCC---CCCccccchhhhhhhcCCCC-hhhhccccccccccccCCCChhhhhhhhhH
Confidence 456888888888899999987 78889888888777555433 333467888999999999999999987654
No 126
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=81.42 E-value=0.96 Score=30.12 Aligned_cols=23 Identities=35% Similarity=0.592 Sum_probs=20.4
Q ss_pred hHHHHHHHhhhhcCCCCCcccHHH
Q 048069 86 EAEKITFAFRLYDLRGTGYIAREE 109 (213)
Q Consensus 86 ~~~~~~~~F~~fD~d~~g~Is~~e 109 (213)
..+.+..+||.+ .++.++||.+|
T Consensus 4 s~eqv~~aFr~l-A~~KpyVT~~d 26 (69)
T PF08726_consen 4 SAEQVEEAFRAL-AGGKPYVTEED 26 (69)
T ss_dssp TCHHHHHHHHHH-CTSSSCEEHHH
T ss_pred CHHHHHHHHHHH-HcCCCcccHHH
Confidence 457889999999 78999999999
No 127
>PF08414 NADPH_Ox: Respiratory burst NADPH oxidase; InterPro: IPR013623 This domain is found in plant proteins such as respiratory burst NADPH oxidase proteins which produce reactive oxygen species as a defence mechanism. It tends to occur to the N terminus of an EF-hand (IPR002048 from INTERPRO), which suggests a direct regulatory effect of Ca2+ on the activity of the NADPH oxidase in plants []. ; GO: 0004601 peroxidase activity, 0050664 oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor, 0055114 oxidation-reduction process; PDB: 3A8R_A.
Probab=80.29 E-value=3.7 Score=29.26 Aligned_cols=64 Identities=20% Similarity=0.326 Sum_probs=47.2
Q ss_pred HHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccccchHHHHHHHhhhcCC---CCccccHHHHHHHHHhhC
Q 048069 12 EVEALYDLFKKLSSSIIDDGLIHKEEFQLALLRNSSKQNLFADRIFDLFDVK---RNGVIEFGEFVRSLSIFH 81 (213)
Q Consensus 12 ~i~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~~~~~~~~~~~~lf~~~d~~---~~g~I~f~ef~~~~~~~~ 81 (213)
....+...|+.+. .+|++....|..++.-. ....++.+||...... ....|+-+|+..++..+.
T Consensus 28 ~W~~VE~RFd~La----~dG~L~rs~Fg~CIGM~--dSkeFA~eLFdALaRrr~i~~~~I~k~eL~efW~qis 94 (100)
T PF08414_consen 28 GWKEVEKRFDKLA----KDGLLPRSDFGECIGMK--DSKEFAGELFDALARRRGIKGDSITKDELKEFWEQIS 94 (100)
T ss_dssp -HHHHHHHHHHH-----BTTBEEGGGHHHHHT----S-HHHHHHHHHHHHHHTT--SSEE-HHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhC----cCCcccHHHHHHhcCCc--ccHHHHHHHHHHHHHhcCCccCCcCHHHHHHHHHHhh
Confidence 3567888999997 78999999999988422 4677888888887643 257899999999998876
No 128
>KOG4301 consensus Beta-dystrobrevin [Cytoskeleton]
Probab=79.83 E-value=13 Score=32.42 Aligned_cols=112 Identities=13% Similarity=0.202 Sum_probs=71.3
Q ss_pred HHHHhhhcCCCCccccHHHHHHHHHhhCCCCchHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHH
Q 048069 54 DRIFDLFDVKRNGVIEFGEFVRSLSIFHPSAPEAEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLK 133 (213)
Q Consensus 54 ~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~ 133 (213)
.-+...+|..+.|+++.-.....+...+ ++...++++.+|.... |.+|.+..-.+-++ ++
T Consensus 113 aflLaA~ds~~~g~~~vfavkialatlc-~gk~~dklryIfs~is-ds~gim~~i~~~~f------------------l~ 172 (434)
T KOG4301|consen 113 AFLLAAEDSEGQGKQQVFAVKIALATLC-GGKIKDKLRYIFSLIS-DSRGIMQEIQRDQF------------------LH 172 (434)
T ss_pred HHHHhhcCccCCCCceeecchhhhhhhc-cchHHHHHHHHHHHHc-cchHHHHHHHHHHH------------------HH
Confidence 4566778888899999888888899998 5788899999999986 66776555543222 33
Q ss_pred HHHHH---HhhhccccCChHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHhhChhHHhhcccch
Q 048069 134 EMVVS---LLSESELALSDDVVESIVDKTMMEADIKGDGKIDLEEWTEFAGRNPTILKSMTLPY 194 (213)
Q Consensus 134 ~~l~~---~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dg~It~~ef~~~l~~~~~~~~~~~~~~ 194 (213)
+.+.. ....+..+.++. .++..|.. +.+++++.|+..+..+|.-...+-+|.
T Consensus 173 evlslpT~v~e~psfg~te~----~a~~cf~q-----qrKv~Ln~fldtl~sdp~p~cl~wlpL 227 (434)
T KOG4301|consen 173 EVLSLPTAVFEGPSFGYTEL----SARLCFLQ-----QRKVELNQFLDTLMSDPPPQCLVWLPL 227 (434)
T ss_pred HHHcCCchhhcCCCcchHHH----HHHHHHHH-----HHHHHHHHHHHHHhcCCCchhHHHHHH
Confidence 33321 111111222222 23333332 457999999999998876655443333
No 129
>KOG2243 consensus Ca2+ release channel (ryanodine receptor) [Signal transduction mechanisms]
Probab=79.19 E-value=3.7 Score=42.14 Aligned_cols=59 Identities=15% Similarity=0.359 Sum_probs=45.2
Q ss_pred HhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHhCCCCCCccc
Q 048069 93 AFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEADIKGDGKID 172 (213)
Q Consensus 93 ~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dg~It 172 (213)
.|+.||+||.|.|+..| +.+++.. ..+.++.+++-++ +-...+.+...+
T Consensus 4062 tfkeydpdgkgiiskkd----------------------f~kame~-----~k~ytqse~dfll----scae~dend~~~ 4110 (5019)
T KOG2243|consen 4062 TFKEYDPDGKGIISKKD----------------------FHKAMEG-----HKHYTQSEIDFLL----SCAEADENDMFD 4110 (5019)
T ss_pred cchhcCCCCCccccHHH----------------------HHHHHhc-----cccchhHHHHHHH----HhhccCcccccc
Confidence 47788999999999999 7776643 3566777776555 666667777899
Q ss_pred HHHHHHHHhh
Q 048069 173 LEEWTEFAGR 182 (213)
Q Consensus 173 ~~ef~~~l~~ 182 (213)
|++|+.-+..
T Consensus 4111 y~dfv~rfhe 4120 (5019)
T KOG2243|consen 4111 YEDFVDRFHE 4120 (5019)
T ss_pred HHHHHHHhcC
Confidence 9999987643
No 130
>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=79.15 E-value=3.5 Score=38.33 Aligned_cols=64 Identities=19% Similarity=0.298 Sum_probs=51.8
Q ss_pred HHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHhCCCCC
Q 048069 89 KITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEADIKGD 168 (213)
Q Consensus 89 ~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D~~~d 168 (213)
..+.-|..+|.|+.|+++..+ +.+.+... +..++++.+.+++ ++.|.+.+
T Consensus 594 ~~~~rf~~lD~~k~~~~~i~~----------------------v~~vlk~~----~~~~d~~~~~~~l----~ea~~~~~ 643 (680)
T KOG0042|consen 594 RRKTRFAFLDADKKAYQAIAD----------------------VLKVLKSE----NVGWDEDRLHEEL----QEADENLN 643 (680)
T ss_pred HHHHHHHhhcchHHHHHHHHH----------------------HHHHHHHh----cCCCCHHHHHHHH----HHHHHhhc
Confidence 455678899999999999999 77777654 5577888876666 78888889
Q ss_pred CcccHHHHHHHHhh
Q 048069 169 GKIDLEEWTEFAGR 182 (213)
Q Consensus 169 g~It~~ef~~~l~~ 182 (213)
|.+...||.+.++.
T Consensus 644 g~v~l~e~~q~~s~ 657 (680)
T KOG0042|consen 644 GFVELREFLQLMSA 657 (680)
T ss_pred ceeeHHHHHHHHHH
Confidence 99999999998864
No 131
>PF04876 Tenui_NCP: Tenuivirus major non-capsid protein; InterPro: IPR006960 This entry contains the tenuivirus major non-capsid protein. Proteins accumulate in large amounts in tenuivirus infected cells. They are found in the inclusion bodies that are formed after infection [].
Probab=79.12 E-value=12 Score=28.71 Aligned_cols=78 Identities=18% Similarity=0.307 Sum_probs=59.2
Q ss_pred CCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHhCCCCCCcccHHHHHHH
Q 048069 100 RGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEADIKGDGKIDLEEWTEF 179 (213)
Q Consensus 100 d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dg~It~~ef~~~ 179 (213)
+.+|.|+...|-.+++ .+++.|..+++++.. .+++..++..+++.+...+-.++ ++-++|...
T Consensus 95 ~~n~~i~~~~ff~~lQ---------~~lGdWIT~~~Lkh~-----n~MSk~Qik~L~~~Ii~~akae~---~dtE~Ye~v 157 (175)
T PF04876_consen 95 STNGLIDIGKFFDILQ---------PKLGDWITKNFLKHP-----NRMSKDQIKTLCEQIIEMAKAES---SDTEHYEKV 157 (175)
T ss_pred CcccceeHHHHHHHHH---------HHhhhHHHHHHHhcc-----chhhHHHHHHHHHHHHHHHhccC---CchHHHHHH
Confidence 4578899999877655 488888888888643 67888999999988877764432 445888888
Q ss_pred HhhChhHHhhcccch
Q 048069 180 AGRNPTILKSMTLPY 194 (213)
Q Consensus 180 l~~~~~~~~~~~~~~ 194 (213)
..+.|.....+..++
T Consensus 158 wkKmPaY~~nil~~~ 172 (175)
T PF04876_consen 158 WKKMPAYFSNILQPY 172 (175)
T ss_pred HHHhhHHHHHHHHHH
Confidence 889898887665544
No 132
>PF09068 EF-hand_2: EF hand; InterPro: IPR015153 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=78.85 E-value=7.6 Score=28.98 Aligned_cols=23 Identities=22% Similarity=0.343 Sum_probs=16.1
Q ss_pred HHHHHhhhhcCCCCCcccHHHHH
Q 048069 89 KITFAFRLYDLRGTGYIAREELC 111 (213)
Q Consensus 89 ~~~~~F~~fD~d~~g~Is~~e~~ 111 (213)
-+.++...||.+++|.|+.-+|+
T Consensus 98 ~ln~Ll~vyD~~rtG~I~vls~K 120 (127)
T PF09068_consen 98 LLNWLLNVYDSQRTGKIRVLSFK 120 (127)
T ss_dssp HHHHHHHHH-TT--SEEEHHHHH
T ss_pred HHHHHHHHhCCCCCCeeehhHHH
Confidence 36778899999999999999833
No 133
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=76.96 E-value=5.4 Score=30.29 Aligned_cols=70 Identities=11% Similarity=0.117 Sum_probs=37.7
Q ss_pred CcccHHHHHHHHhhccccchHHHHHHHhhhcCC-------CCccccHHHHHHHHHhhCCCCchHHHHHHHhhhhcCCC
Q 048069 31 GLIHKEEFQLALLRNSSKQNLFADRIFDLFDVK-------RNGVIEFGEFVRSLSIFHPSAPEAEKITFAFRLYDLRG 101 (213)
Q Consensus 31 g~is~~ef~~~l~~~~~~~~~~~~~lf~~~d~~-------~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~fD~d~ 101 (213)
+.|+..||...- ....-....++.+...|..+ ..+.|+|+.|..++........+++.++..|..|-...
T Consensus 6 ~~lsp~eF~qLq-~y~eys~kklkdvl~eF~~~g~~~~~~~~~~Id~egF~~Fm~~yLe~d~P~~lc~hLF~sF~~~~ 82 (138)
T PF14513_consen 6 VSLSPEEFAQLQ-KYSEYSTKKLKDVLKEFHGDGSLAKYNPEEPIDYEGFKLFMKTYLEVDLPEDLCQHLFLSFQKKP 82 (138)
T ss_dssp S-S-HHHHHHHH-HHHHH----HHHHHHHH-HTSGGGGGEETTEE-HHHHHHHHHHHTT-S--HHHHHHHHHHS----
T ss_pred eccCHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHcCCCCHHHHHHHHHHHhCcc
Confidence 456666666322 11111222345555555322 34689999999999998876788999999999996544
No 134
>cd07313 terB_like_2 tellurium resistance terB-like protein, subgroup 2. This family includes several uncharacterized bacterial proteins. Protein sequence homology analysis shows they are similar to tellurium resistance protein terB, but the function of this family is unknown.
Probab=71.92 E-value=12 Score=26.30 Aligned_cols=79 Identities=13% Similarity=0.055 Sum_probs=51.5
Q ss_pred CCCcccHHHHHHHH---hhccccchHHHHHHHhhhcCCCCccccHHHHHHHHHhhCCCCchHHHHHHHhhhhcCCCCCcc
Q 048069 29 DDGLIHKEEFQLAL---LRNSSKQNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFHPSAPEAEKITFAFRLYDLRGTGYI 105 (213)
Q Consensus 29 ~~g~is~~ef~~~l---~~~~~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~fD~d~~g~I 105 (213)
.||.++..|...+- .............+...+........++.+|...+............+..+++.- --||.+
T Consensus 12 aDG~v~~~E~~~i~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~~L~~vA--~ADG~~ 89 (104)
T cd07313 12 ADGEYDEEERAAIDRLLAERFGLDAEEAAELLAEAEALEEEAPDLYEFTSLIKEHFDYEERLELVEALWEVA--YADGEL 89 (104)
T ss_pred HcCCCCHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHH--HhcCCC
Confidence 57888888877432 2222224445577777777666667889999988876553233445566666665 356999
Q ss_pred cHHH
Q 048069 106 AREE 109 (213)
Q Consensus 106 s~~e 109 (213)
+..|
T Consensus 90 ~~~E 93 (104)
T cd07313 90 DEYE 93 (104)
T ss_pred CHHH
Confidence 9998
No 135
>KOG1707 consensus Predicted Ras related/Rac-GTP binding protein [Defense mechanisms]
Probab=71.37 E-value=11 Score=35.42 Aligned_cols=94 Identities=14% Similarity=0.207 Sum_probs=64.0
Q ss_pred cCCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccccchHHHHHHHhhh-cCCCCccccHHHHHHHHHhhCCC
Q 048069 5 FWAVTVNEVEALYDLFKKLSSSIIDDGLIHKEEFQLALLRNSSKQNLFADRIFDLF-DVKRNGVIEFGEFVRSLSIFHPS 83 (213)
Q Consensus 5 ~~~~s~~~i~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~~~~~~~~~~~~lf~~~-d~~~~g~I~f~ef~~~~~~~~~~ 83 (213)
...+|..-++-+...|.++|.+ +||.++.+|+..++...+..+ +.+..+... -.+..|.+++.-|+..++.+.--
T Consensus 306 s~ELs~~~~~Fl~~~f~~~D~d--~Dg~L~p~El~~LF~~~P~~p--W~~~~~~~~t~~~~~G~ltl~g~l~~WsL~Tll 381 (625)
T KOG1707|consen 306 SVELSPKGYRFLVDVFEKFDRD--NDGALSPEELKDLFSTAPGSP--WTSSPYKDSTVKNERGWLTLNGFLSQWSLMTLL 381 (625)
T ss_pred ceeccHHHHHHHHHHHHhccCC--CCCCcCHHHHHHHhhhCCCCC--CCCCcccccceecccceeehhhHHHHHHHHhhc
Confidence 4567888899999999999999 999999999997774433222 110001111 11257899999999988876643
Q ss_pred CchHHHHHHHhhhhcCCCC
Q 048069 84 APEAEKITFAFRLYDLRGT 102 (213)
Q Consensus 84 ~~~~~~~~~~F~~fD~d~~ 102 (213)
......-..+|--|..++.
T Consensus 382 d~~~t~~~L~Ylgf~~~~~ 400 (625)
T KOG1707|consen 382 DPRRTLEYLAYLGFPTDAG 400 (625)
T ss_pred cHHHHHHHHHhcCCccccc
Confidence 4444555666777766644
No 136
>PLN02952 phosphoinositide phospholipase C
Probab=70.00 E-value=37 Score=32.13 Aligned_cols=87 Identities=11% Similarity=0.035 Sum_probs=58.2
Q ss_pred CCCcccHHHHHHHHhhcc---ccchHHHHHHHhhhcCCCCccccHHHHHHHHHhhCCCC-chHHHHHHHhhhhc------
Q 048069 29 DDGLIHKEEFQLALLRNS---SKQNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFHPSA-PEAEKITFAFRLYD------ 98 (213)
Q Consensus 29 ~~g~is~~ef~~~l~~~~---~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~-~~~~~~~~~F~~fD------ 98 (213)
+.|.+++++|+.....+. ..+.+.+..+|..+..++ +.++.++|..++...+... ...+.+..++..+-
T Consensus 13 ~~g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~~~-~~mt~~~l~~FL~~~Q~e~~~~~~~~~~i~~~~~~~~~~~ 91 (599)
T PLN02952 13 DSGSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSVGG-GHMGADQLRRFLVLHQDELDCTLAEAQRIVEEVINRRHHV 91 (599)
T ss_pred cCCCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhCCC-CccCHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHhhcccc
Confidence 568999999985443322 225677899999986544 6899999999999988532 23444555544331
Q ss_pred -CCCCCcccHHHHHHHhhc
Q 048069 99 -LRGTGYIAREELCNICKS 116 (213)
Q Consensus 99 -~d~~g~Is~~e~~~~~~~ 116 (213)
..+.+.++.+.|...+.+
T Consensus 92 ~~~~~~~l~~~~F~~~l~s 110 (599)
T PLN02952 92 TRYTRHGLNLDDFFHFLLY 110 (599)
T ss_pred ccccccCcCHHHHHHHHcC
Confidence 123356899997777665
No 137
>PLN02230 phosphoinositide phospholipase C 4
Probab=68.18 E-value=26 Score=33.08 Aligned_cols=75 Identities=13% Similarity=0.140 Sum_probs=50.6
Q ss_pred chHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHhC
Q 048069 85 PEAEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEAD 164 (213)
Q Consensus 85 ~~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D 164 (213)
.+...+..+|..|-.++ +.++.++ |.++|...-++. ...+.+.++.+++.+.....
T Consensus 26 ~p~~ei~~lf~~~s~~~-~~mt~~~----------------------l~~FL~~~Q~~~-~~~~~~~~~~i~~~~~~~~~ 81 (598)
T PLN02230 26 GPVADVRDLFEKYADGD-AHMSPEQ----------------------LQKLMAEEGGGE-GETSLEEAERIVDEVLRRKH 81 (598)
T ss_pred CCcHHHHHHHHHHhCCC-CccCHHH----------------------HHHHHHHhCCCc-ccCCHHHHHHHHHHHHhhcc
Confidence 45678999999996444 8999999 777776542111 13356667777766544332
Q ss_pred ---CCCCCcccHHHHHHHHhhC
Q 048069 165 ---IKGDGKIDLEEWTEFAGRN 183 (213)
Q Consensus 165 ---~~~dg~It~~ef~~~l~~~ 183 (213)
.-+.+.++.+.|..+|...
T Consensus 82 ~~~~~~~~~~~~~~F~~yL~s~ 103 (598)
T PLN02230 82 HIAKFTRRNLTLDDFNYYLFST 103 (598)
T ss_pred ccccccccccCHHHHHHHHcCc
Confidence 2234579999999999773
No 138
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=68.04 E-value=9.4 Score=25.38 Aligned_cols=57 Identities=14% Similarity=0.289 Sum_probs=32.8
Q ss_pred HHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccccchHHHHHHHhhhcCC---CCccccHHHHHH
Q 048069 14 EALYDLFKKLSSSIIDDGLIHKEEFQLALLRNSSKQNLFADRIFDLFDVK---RNGVIEFGEFVR 75 (213)
Q Consensus 14 ~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~~~~~~~~~~~~lf~~~d~~---~~g~I~f~ef~~ 75 (213)
+.+.+.|+.+ .. +.++||..+|+..|... ..+..+..|-...+.+ ..|.++|..|+.
T Consensus 6 eqv~~aFr~l-A~--~KpyVT~~dLr~~l~pe--~aey~~~~Mp~~~~~~~~~~~~~~DY~~f~~ 65 (69)
T PF08726_consen 6 EQVEEAFRAL-AG--GKPYVTEEDLRRSLTPE--QAEYCISRMPPYEGPDGDAIPGAYDYESFTN 65 (69)
T ss_dssp HHHHHHHHHH-CT--SSSCEEHHHHHHHS-CC--CHHHHHCCSEC--SSS----TTEEECHHHHC
T ss_pred HHHHHHHHHH-Hc--CCCcccHHHHHHHcCcH--HHHHHHHHCcccCCCCcCCCCCCcCHHHHHH
Confidence 4567888888 44 88999999999876221 1222112222222222 236788888865
No 139
>PF12174 RST: RCD1-SRO-TAF4 (RST) plant domain; InterPro: IPR022003 This domain is found in many plant proteins including SROs and RCD1s; it is required for interaction with multiple plant transcription factors.
Probab=67.75 E-value=11 Score=25.09 Aligned_cols=45 Identities=20% Similarity=0.220 Sum_probs=29.8
Q ss_pred CccccHHHHHHHHHhhCCCCchHHHHHHHhhhhcCCCCCcccHHHHHHH
Q 048069 65 NGVIEFGEFVRSLSIFHPSAPEAEKITFAFRLYDLRGTGYIAREELCNI 113 (213)
Q Consensus 65 ~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~fD~d~~g~Is~~e~~~~ 113 (213)
+-.++|......+.... +...+..+...|+.=..+.|+.+||...
T Consensus 6 sp~~~F~~L~~~l~~~l----~~~~~~~l~~~Y~~~k~~kIsR~~fvr~ 50 (70)
T PF12174_consen 6 SPWMPFPMLFSALSKHL----PPSKMDLLQKHYEEFKKKKISREEFVRK 50 (70)
T ss_pred CCcccHHHHHHHHHHHC----CHHHHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 44566666666665544 3455666777776667899999996554
No 140
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=67.55 E-value=28 Score=26.76 Aligned_cols=63 Identities=17% Similarity=0.251 Sum_probs=37.3
Q ss_pred HhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHhCCCCCCccc
Q 048069 93 AFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEADIKGDGKID 172 (213)
Q Consensus 93 ~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dg~It 172 (213)
.|..|-..+...++-.- +..+|+.+ +-.+..++...+ +.+|..+-..+...|+
T Consensus 7 ~f~~fG~~~~~~m~~~~----------------------F~Kl~kD~-~i~d~k~t~tdv----DiiF~Kvk~k~~~~I~ 59 (154)
T PF05517_consen 7 AFASFGKKNGTEMDSKN----------------------FAKLCKDC-GIIDKKLTSTDV----DIIFSKVKAKGARKIT 59 (154)
T ss_dssp HHHCSSTSTSSEEEHHH----------------------HHHHHHHT-SS--SSS-HHHH----HHHHHHHT-SS-SEEE
T ss_pred HHHHhcCCccccccHHH----------------------HHHHHHHc-CCCCCCCchHHH----HHHHHHhhcCCCcccC
Confidence 34444455666788888 55555443 222344666655 5566876555556799
Q ss_pred HHHHHHHHhh
Q 048069 173 LEEWTEFAGR 182 (213)
Q Consensus 173 ~~ef~~~l~~ 182 (213)
|++|..+|..
T Consensus 60 f~~F~~aL~~ 69 (154)
T PF05517_consen 60 FEQFLEALAE 69 (154)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999854
No 141
>KOG2243 consensus Ca2+ release channel (ryanodine receptor) [Signal transduction mechanisms]
Probab=65.38 E-value=9.6 Score=39.43 Aligned_cols=58 Identities=19% Similarity=0.389 Sum_probs=43.1
Q ss_pred HHHhhcCCCCCCCcccHHHHHHHHhhccccchHHHHHHHhhhcCCCCccccHHHHHHHHH
Q 048069 19 LFKKLSSSIIDDGLIHKEEFQLALLRNSSKQNLFADRIFDLFDVKRNGVIEFGEFVRSLS 78 (213)
Q Consensus 19 ~F~~~d~~~~~~g~is~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~ 78 (213)
.|+.+|++ +.|.|++.+|.+++.....-....++-+......|.+...+|++|+.-+.
T Consensus 4062 tfkeydpd--gkgiiskkdf~kame~~k~ytqse~dfllscae~dend~~~y~dfv~rfh 4119 (5019)
T KOG2243|consen 4062 TFKEYDPD--GKGIISKKDFHKAMEGHKHYTQSEIDFLLSCAEADENDMFDYEDFVDRFH 4119 (5019)
T ss_pred cchhcCCC--CCccccHHHHHHHHhccccchhHHHHHHHHhhccCccccccHHHHHHHhc
Confidence 45668888 99999999999998443322334456677777778888899999987543
No 142
>PF01023 S_100: S-100/ICaBP type calcium binding domain; InterPro: IPR013787 The calcium-binding domain found in S100 and CaBP-9k proteins is a subfamily of the EF-hand calcium-binding domain []. S100s are small dimeric acidic calcium and zinc-binding proteins abundant in the brain, with S100B playing an important role in modulating the proliferation and differentiation of neurons and glia cells []. S100 proteins have two different types of calcium-binding sites: a low affinity one with a special structure, and a 'normal' EF-hand type high-affinity site. Calbindin-D9k (CaBP-9k) also belong to this family of proteins, but it does not form dimers. CaBP-9k is a cytosolic protein expressed in a variety of tissues. Although its precise function is unknown, it appears to be under the control of the steroid hormones oestrogen and progesterone in the female reproductive system []. In the intestine, CaBP-9k may be involved in calcium absorption by mediating intracellular diffusion []. This entry represents a subdomain of the calcium-binding domain found in S100, CaBP-9k, and related proteins.; PDB: 2RGI_A 4DUQ_B 2KAY_B 2KAX_A 2CNP_A 1CNP_A 1A03_A 1JWD_B 2JTT_A 1XK4_B ....
Probab=65.23 E-value=21 Score=21.39 Aligned_cols=33 Identities=24% Similarity=0.377 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHh
Q 048069 11 NEVEALYDLFKKLSSSIIDDGLIHKEEFQLALL 43 (213)
Q Consensus 11 ~~i~~l~~~F~~~d~~~~~~g~is~~ef~~~l~ 43 (213)
..+..|..+|.+++...+....++..||+..+.
T Consensus 3 ~ai~~iI~vFhkYa~~~Gd~~~Lsk~Elk~Ll~ 35 (44)
T PF01023_consen 3 KAIETIIDVFHKYAGKEGDKDTLSKKELKELLE 35 (44)
T ss_dssp HHHHHHHHHHHHHHTSSSSTTSEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCCCeEcHHHHHHHHH
Confidence 346677888888875433566899999997763
No 143
>PLN02223 phosphoinositide phospholipase C
Probab=65.20 E-value=33 Score=31.98 Aligned_cols=75 Identities=16% Similarity=0.061 Sum_probs=53.9
Q ss_pred chHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhcc-ccCChHHHHHHHHHHHHHh
Q 048069 85 PEAEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESE-LALSDDVVESIVDKTMMEA 163 (213)
Q Consensus 85 ~~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~f~~~ 163 (213)
.+.+.++.+|..+- +++|.++.+. +.+++.-+....+ ...+.+.++.+++.++...
T Consensus 13 ~~p~~v~~~f~~~~-~~~~~m~~~~----------------------l~~fl~~l~~~q~e~~~~~~~a~~i~~~~~~~~ 69 (537)
T PLN02223 13 NQPDLILNFFGNEF-HGYDDDMPEL----------------------LPRFIELLDTEKDEDGAGLNAAEKIAAELKRRK 69 (537)
T ss_pred CCcHHHHHHHHHhh-cCCCCCCHHH----------------------HHHHHHHHHHhcccccCCHHHHHHHHHHHHhhc
Confidence 45678889999995 7889999999 6666633323333 4566778888888877654
Q ss_pred C----CCCCCcccHHHHHHHHhh
Q 048069 164 D----IKGDGKIDLEEWTEFAGR 182 (213)
Q Consensus 164 D----~~~dg~It~~ef~~~l~~ 182 (213)
. ..+.+.++.+.|..++.+
T Consensus 70 ~~~~~~~~~~~l~~~~f~~~L~s 92 (537)
T PLN02223 70 CDILAFRNLRCLELDHLNEFLFS 92 (537)
T ss_pred ccchhhhhccccCHHHHHHHhcC
Confidence 2 123356999999999987
No 144
>KOG4004 consensus Matricellular protein Osteonectin/SPARC/BM-40 [Extracellular structures]
Probab=63.38 E-value=4 Score=32.96 Aligned_cols=54 Identities=24% Similarity=0.290 Sum_probs=37.3
Q ss_pred HHhhhcCC-CCccccHHHHHHHHHhhCCCCchHHHHHHHhhhhcCCCCCcccHHHHHH
Q 048069 56 IFDLFDVK-RNGVIEFGEFVRSLSIFHPSAPEAEKITFAFRLYDLRGTGYIAREELCN 112 (213)
Q Consensus 56 lf~~~d~~-~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~fD~d~~g~Is~~e~~~ 112 (213)
-|...|.. -+|+++--|+..+-+.+.+ .+-=+...|.-+|.|++|+|+.+||..
T Consensus 192 qf~qld~~p~d~~~sh~el~pl~ap~ip---me~c~~~f~e~cd~~nd~~ial~ew~~ 246 (259)
T KOG4004|consen 192 QFGQLDQHPIDGYLSHTELAPLRAPLIP---MEHCTTRFFETCDLDNDKYIALDEWAG 246 (259)
T ss_pred eeccccCCCccccccccccccccCCccc---HHhhchhhhhcccCCCCCceeHHHhhc
Confidence 34555654 4788888887776555442 444566678888888888888888764
No 145
>KOG0035 consensus Ca2+-binding actin-bundling protein (actinin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=61.76 E-value=23 Score=34.90 Aligned_cols=73 Identities=15% Similarity=0.077 Sum_probs=51.2
Q ss_pred HHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCCh-HHHHHHHHHHHHHhCC
Q 048069 87 AEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSD-DVVESIVDKTMMEADI 165 (213)
Q Consensus 87 ~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~~~~~~~~f~~~D~ 165 (213)
..+++..|+.+|+...|.++.++ +.+.+..+ |....+ .+..+-+..+....|.
T Consensus 746 ~~ElrAle~~~~~~d~~aa~~e~----------------------~~~~Lmsl----g~~~e~ee~~~~e~~~lvn~~n~ 799 (890)
T KOG0035|consen 746 LDELRALENEQDKIDGGAASPEE----------------------LLRCLMSL----GYNTEEEEQGIAEWFRLVNKKNP 799 (890)
T ss_pred HHHHHHHHhHHHHhhcccCCHHH----------------------HHHHHHhc----CcccchhHHHHHHHHHHHhccCc
Confidence 45788999999999999999999 66666555 444433 3333333334455555
Q ss_pred CCCCcccHHHHHHHHhhChh
Q 048069 166 KGDGKIDLEEWTEFAGRNPT 185 (213)
Q Consensus 166 ~~dg~It~~ef~~~l~~~~~ 185 (213)
+.-|.+++.+|...|.+--+
T Consensus 800 l~~~qv~~~e~~ddl~R~~e 819 (890)
T KOG0035|consen 800 LIQGQVQLLEFEDDLEREYE 819 (890)
T ss_pred ccccceeHHHHHhHhhhhhh
Confidence 66689999999999977443
No 146
>PF09068 EF-hand_2: EF hand; InterPro: IPR015153 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=60.88 E-value=52 Score=24.46 Aligned_cols=75 Identities=17% Similarity=0.154 Sum_probs=41.8
Q ss_pred HHHHHHhhhhcCCC--CCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccc-c-CC----hHHHHHHHHHH
Q 048069 88 EKITFAFRLYDLRG--TGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESEL-A-LS----DDVVESIVDKT 159 (213)
Q Consensus 88 ~~~~~~F~~fD~d~--~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~-~~----~~~~~~~~~~~ 159 (213)
..+..+|+....+. +..|+..++..++.. + ...+.+..+. . ++ +..++-.++.+
T Consensus 41 ~~v~~~f~~~~l~~~~d~~l~v~~l~~~L~~---------------i---y~~l~~~~p~~~~i~~~~v~~a~~L~ln~L 102 (127)
T PF09068_consen 41 SNVIEAFREHGLNQSNDSSLSVSQLETLLSS---------------I---YEFLNKRLPTLHQIPSRPVDLAVDLLLNWL 102 (127)
T ss_dssp HHHHHHHHHTT---T-TSEEEHHHHHHHHHH---------------H---HHHHHHHSTTS--HH-----HHHHHHHHHH
T ss_pred HHHHHHHHHcCCCcccCCCCCHHHHHHHHHH---------------H---HHHHHHHCCCCCCCCchhHHHHHHHHHHHH
Confidence 44555666665443 467999996655333 2 2111111111 1 11 25567778889
Q ss_pred HHHhCCCCCCcccHHHHHHHH
Q 048069 160 MMEADIKGDGKIDLEEWTEFA 180 (213)
Q Consensus 160 f~~~D~~~dg~It~~ef~~~l 180 (213)
...+|.+++|.|+--.|...+
T Consensus 103 l~vyD~~rtG~I~vls~KvaL 123 (127)
T PF09068_consen 103 LNVYDSQRTGKIRVLSFKVAL 123 (127)
T ss_dssp HHHH-TT--SEEEHHHHHHHH
T ss_pred HHHhCCCCCCeeehhHHHHHH
Confidence 999999999999988887665
No 147
>KOG3866 consensus DNA-binding protein of the nucleobindin family [General function prediction only]
Probab=58.21 E-value=33 Score=29.78 Aligned_cols=92 Identities=13% Similarity=0.299 Sum_probs=58.9
Q ss_pred CHHHHHHHHHH--------------HHhhcCCCCCCCcccHHHHHHHHhh----c--cccc-hHH----------HHHHH
Q 048069 9 TVNEVEALYDL--------------FKKLSSSIIDDGLIHKEEFQLALLR----N--SSKQ-NLF----------ADRIF 57 (213)
Q Consensus 9 s~~~i~~l~~~--------------F~~~d~~~~~~g~is~~ef~~~l~~----~--~~~~-~~~----------~~~lf 57 (213)
|.++++.++.. |...|.+ ++|.++..++...+.. . ..+. +.. .+-++
T Consensus 225 SkdQLkEVWEE~DgLdpn~fdPKTFF~LHD~N--sDGfldeqELEaLFtkELEKvYdpkNeeDDM~EmeEErlRMREHVM 302 (442)
T KOG3866|consen 225 SKDQLKEVWEESDGLDPNQFDPKTFFALHDLN--SDGFLDEQELEALFTKELEKVYDPKNEEDDMKEMEEERLRMREHVM 302 (442)
T ss_pred cHHHHHHHHHHhcCCCcccCCcchheeeeccC--CcccccHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHH
Confidence 55666666643 4456666 8999999999865532 1 1111 111 13467
Q ss_pred hhhcCCCCccccHHHHHHHHHhhCCCCchHHHHHHHhhhhcCCCCCcccHHH
Q 048069 58 DLFDVKRNGVIEFGEFVRSLSIFHPSAPEAEKITFAFRLYDLRGTGYIAREE 109 (213)
Q Consensus 58 ~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~fD~d~~g~Is~~e 109 (213)
..+|+|.+.-|+.+||+....... ..++.+.|.. .+.....|-+|
T Consensus 303 k~vDtNqDRlvtleEFL~~t~~ke-f~~p~e~WEt------l~q~~~yTeEE 347 (442)
T KOG3866|consen 303 KQVDTNQDRLVTLEEFLNDTDNKE-FNPPKEEWET------LGQKKVYTEEE 347 (442)
T ss_pred HhcccchhhhhhHHHHHhhhhhcc-cCCcchhhhh------hcccccccHHH
Confidence 778999999999999998775543 2344455542 34556677888
No 148
>KOG2557 consensus Uncharacterized conserved protein, contains TLDc domain [Function unknown]
Probab=56.83 E-value=95 Score=27.64 Aligned_cols=59 Identities=15% Similarity=0.450 Sum_probs=45.4
Q ss_pred HHHHhhhcCC-CCccccHHHHHHHHHhhCCCCchHHHHHHHhhhhcCCCCCcccHHHHHHH
Q 048069 54 DRIFDLFDVK-RNGVIEFGEFVRSLSIFHPSAPEAEKITFAFRLYDLRGTGYIAREELCNI 113 (213)
Q Consensus 54 ~~lf~~~d~~-~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~fD~d~~g~Is~~e~~~~ 113 (213)
+.+|...... ++..++++.+.-...... .+...+..+.++...|.+++|..+..+..+.
T Consensus 60 q~~f~~vk~~~q~~~~~l~k~~~~~~~~~-~gt~dq~a~mL~~~~~~sgn~~~~~~q~eQ~ 119 (427)
T KOG2557|consen 60 QRMFDMVKQRRQDDKMTLEKLVIAKATYE-KGTDDQIAEMLYQTLDVNGNGVLSRSQLEQF 119 (427)
T ss_pred ceEeeeccCccCCccchHHHHhhHHhhhc-cCcccHHHHHHHHHHhhccccccchhHHHHH
Confidence 4555555443 355788998888777766 4778889999999999999999999995554
No 149
>PF00404 Dockerin_1: Dockerin type I repeat; InterPro: IPR018242 Gram-positive, thermophilic anaerobes such as Clostridium thermocellum or Clostridium cellulolyticum secretes a highly active and thermostable cellulase complex (cellulosome) responsible for the degradation of crystalline cellulose [, ]. The cellulosome contains at least 30 polypeptides, the majority of the enzymes are endoglucanases (3.2.1.4 from EC), but there are also some xylanases (3.2.1.8 from EC), beta-glucosidases (3.2.1.21 from EC) and endo-beta-1,3-1,4-glucanases (3.2.1.73 from EC). Complete sequence data for many of these enzymes has been obtained. A majority of these proteins contain a highly conserved type I dockerin domain of about 65 to 70 residues, which is generally (but not always) located in the C terminus. The dockerin domain is the binding partner of the cohesin domain (see IPR002102 from INTERPRO). The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome []. The dockerin domain contains a tandem repeat of two calcium-binding loop-helix motifs (distinct from EF-hand Ca-binding motifs). These motifs are about 24 amino acids in length. This entry represents these repeated Ca-binding motifs.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3P0D_J 1OHZ_B 2CCL_B 1DAV_A 1DAQ_A 2VN5_B 2VN6_B.
Probab=53.69 E-value=22 Score=17.88 Aligned_cols=13 Identities=31% Similarity=0.618 Sum_probs=10.4
Q ss_pred cCCCCCcccHHHH
Q 048069 98 DLRGTGYIAREEL 110 (213)
Q Consensus 98 D~d~~g~Is~~e~ 110 (213)
|.|++|.|+.-++
T Consensus 1 DvN~DG~vna~D~ 13 (21)
T PF00404_consen 1 DVNGDGKVNAIDL 13 (21)
T ss_dssp -TTSSSSSSHHHH
T ss_pred CCCCCCcCCHHHH
Confidence 6789999999883
No 150
>PLN02228 Phosphoinositide phospholipase C
Probab=53.37 E-value=51 Score=30.99 Aligned_cols=70 Identities=19% Similarity=0.237 Sum_probs=45.8
Q ss_pred CchHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHh
Q 048069 84 APEAEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEA 163 (213)
Q Consensus 84 ~~~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~ 163 (213)
..+.+++..+|..+-. ++.++.++ +.+++...-++ ...+.+.+++++ ..+
T Consensus 20 ~~~~~ei~~if~~~s~--~~~~t~~~----------------------~~~FL~~~Q~~--~~~~~~~~~~i~----~~~ 69 (567)
T PLN02228 20 REPPVSIKRLFEAYSR--NGKMSFDE----------------------LLRFVSEVQGE--RHAGLDYVQDIF----HSV 69 (567)
T ss_pred CCCcHHHHHHHHHhcC--CCccCHHH----------------------HHHHHHHhcCC--ccCCHHHHHHHH----HHh
Confidence 4467889999999864 36899999 66666554221 123344454444 444
Q ss_pred CCC----CCCcccHHHHHHHHhhC
Q 048069 164 DIK----GDGKIDLEEWTEFAGRN 183 (213)
Q Consensus 164 D~~----~dg~It~~ef~~~l~~~ 183 (213)
... ..|.++.+.|..++...
T Consensus 70 ~~~~~~~~~~~~~~~gF~~yl~s~ 93 (567)
T PLN02228 70 KHHNVFHHHGLVHLNAFYRYLFSD 93 (567)
T ss_pred ccchhhcccCccCHHHHHHHhcCc
Confidence 321 34679999999999764
No 151
>KOG3442 consensus Uncharacterized conserved protein [Function unknown]
Probab=52.45 E-value=24 Score=26.24 Aligned_cols=46 Identities=15% Similarity=0.219 Sum_probs=36.1
Q ss_pred CCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHhCCCCCCccc
Q 048069 100 RGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEADIKGDGKID 172 (213)
Q Consensus 100 d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dg~It 172 (213)
+..|.||.+| -+++|+. ...++.++++...+++|..-|+.+.|..-
T Consensus 51 ~~~~~iTlqE----------------------a~qILnV-----~~~ln~eei~k~yehLFevNdkskGGSFY 96 (132)
T KOG3442|consen 51 NSNGKITLQE----------------------AQQILNV-----KEPLNREEIEKRYEHLFEVNDKSKGGSFY 96 (132)
T ss_pred cccccccHHH----------------------HhhHhCC-----CCCCCHHHHHHHHHHHHhccCcccCccee
Confidence 4457799999 6676642 35788999999999999999998878643
No 152
>PF12174 RST: RCD1-SRO-TAF4 (RST) plant domain; InterPro: IPR022003 This domain is found in many plant proteins including SROs and RCD1s; it is required for interaction with multiple plant transcription factors.
Probab=51.11 E-value=12 Score=24.86 Aligned_cols=34 Identities=15% Similarity=0.077 Sum_probs=23.3
Q ss_pred ccCChHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHhh
Q 048069 145 LALSDDVVESIVDKTMMEADIKGDGKIDLEEWTEFAGR 182 (213)
Q Consensus 145 ~~~~~~~~~~~~~~~f~~~D~~~dg~It~~ef~~~l~~ 182 (213)
..++.+.++.+. ..++.=+.++|+.+||++-++.
T Consensus 20 ~~l~~~~~~~l~----~~Y~~~k~~kIsR~~fvr~lR~ 53 (70)
T PF12174_consen 20 KHLPPSKMDLLQ----KHYEEFKKKKISREEFVRKLRQ 53 (70)
T ss_pred HHCCHHHHHHHH----HHHHHHHHCCCCHHHHHHHHHH
Confidence 456666665443 4444445789999999998875
No 153
>KOG4004 consensus Matricellular protein Osteonectin/SPARC/BM-40 [Extracellular structures]
Probab=50.99 E-value=7.3 Score=31.48 Aligned_cols=57 Identities=19% Similarity=0.321 Sum_probs=42.1
Q ss_pred HHhhcCCCCCCCcccHHHHHHHHhhccccchHHHHHHHhhhcCCCCccccHHHHHHHHH
Q 048069 20 FKKLSSSIIDDGLIHKEEFQLALLRNSSKQNLFADRIFDLFDVKRNGVIEFGEFVRSLS 78 (213)
Q Consensus 20 F~~~d~~~~~~g~is~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~ 78 (213)
|-.+|.. +.||++|..|+. -+..+..+-..=..+.|+-.|.|++|+|+..|+.--+.
T Consensus 193 f~qld~~-p~d~~~sh~el~-pl~ap~ipme~c~~~f~e~cd~~nd~~ial~ew~~c~g 249 (259)
T KOG4004|consen 193 FGQLDQH-PIDGYLSHTELA-PLRAPLIPMEHCTTRFFETCDLDNDKYIALDEWAGCFG 249 (259)
T ss_pred eccccCC-Cccccccccccc-cccCCcccHHhhchhhhhcccCCCCCceeHHHhhcccC
Confidence 4456665 479999999887 45444444444458899999999999999999876543
No 154
>cd07313 terB_like_2 tellurium resistance terB-like protein, subgroup 2. This family includes several uncharacterized bacterial proteins. Protein sequence homology analysis shows they are similar to tellurium resistance protein terB, but the function of this family is unknown.
Probab=49.88 E-value=57 Score=22.65 Aligned_cols=45 Identities=11% Similarity=-0.058 Sum_probs=25.5
Q ss_pred CccccHHHHHHHHHhhCCC-CchHHHHHHHhhhhcCCCCCcccHHH
Q 048069 65 NGVIEFGEFVRSLSIFHPS-APEAEKITFAFRLYDLRGTGYIAREE 109 (213)
Q Consensus 65 ~g~I~f~ef~~~~~~~~~~-~~~~~~~~~~F~~fD~d~~g~Is~~e 109 (213)
||.++-.|-..+-..+... +...+....+...+........+..+
T Consensus 13 DG~v~~~E~~~i~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~ 58 (104)
T cd07313 13 DGEYDEEERAAIDRLLAERFGLDAEEAAELLAEAEALEEEAPDLYE 58 (104)
T ss_pred cCCCCHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhCCCHHH
Confidence 6778887766655443321 33444555565666555555566666
No 155
>PF00427 PBS_linker_poly: Phycobilisome Linker polypeptide; InterPro: IPR001297 Phycobilisomes (PBSs) are the major light-harvesting systems in cyanobacteria and red algae. PBS is a supercomplex that is composed of a core complex and multiple peripheral rod complexes. Typically, the core consists of two or five cylinders lying on the membrane with, in most cases, multiple rods radiating from the core to form a hemidiscoidal structure. The building units of the core cylinders and the peripheral rods are trimeric and hexameric discs, in which a monomer consists of a pair of related phycobiliproteins (PBPs), such as phycorerythrins, phycoerythrocyanins, phycocyanins, and allophycocyanins. The discs are connected to each other via specific linker polypeptides to form peripheral rods or core cylinders. Linker polypeptides share a conserved domain of ~180 residues, which can be present in one or multiple copies [, , , , ].; GO: 0015979 photosynthesis, 0030089 phycobilisome; PDB: 2L8V_A 2KY4_A 3OSJ_D 2L06_A 3NPH_B 2L3W_A 3PRU_C 3OHW_A.
Probab=49.28 E-value=84 Score=23.61 Aligned_cols=39 Identities=21% Similarity=0.346 Sum_probs=31.0
Q ss_pred CCcccHHHHHHHHhhChhHHhhc--ccchhHHHHhhhhhhH
Q 048069 168 DGKIDLEEWTEFAGRNPTILKSM--TLPYLKEITLAFPSFV 206 (213)
Q Consensus 168 dg~It~~ef~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~ 206 (213)
+|.||-.||++.+.+.+...+.+ ..+..+-+.+.|-+++
T Consensus 42 ng~IsVreFVr~La~S~~yr~~f~~~~~~~R~iEl~~khlL 82 (131)
T PF00427_consen 42 NGQISVREFVRALAKSELYRKRFFEPNSNYRFIELAFKHLL 82 (131)
T ss_dssp TTSS-HHHHHHHHHTSHHHHHHHTTTS-HHHHHHHHHHHHC
T ss_pred cCCCcHHHHHHHHHcCHHHHHHHcccccchHHHHHHHHHHh
Confidence 68999999999999999888877 4777787888777765
No 156
>PLN02222 phosphoinositide phospholipase C 2
Probab=48.83 E-value=61 Score=30.59 Aligned_cols=70 Identities=11% Similarity=0.272 Sum_probs=47.1
Q ss_pred chHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHhC
Q 048069 85 PEAEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEAD 164 (213)
Q Consensus 85 ~~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D 164 (213)
.+...+..+|..+-. ++.++.++ |.++|...-++ ...+.+.++.+++.. . .
T Consensus 22 ~~~~ei~~if~~~~~--~~~mt~~~----------------------l~~FL~~~Q~~--~~~~~~~~~~ii~~~-~--~ 72 (581)
T PLN02222 22 EAPREIKTIFEKYSE--NGVMTVDH----------------------LHRFLIDVQKQ--DKATREDAQSIINSA-S--S 72 (581)
T ss_pred CCcHHHHHHHHHhcC--CCCcCHHH----------------------HHHHHHHhcCC--ccCCHHHHHHHHHhh-h--h
Confidence 344588999999864 57999999 77777654221 234566666666432 1 1
Q ss_pred CCCCCcccHHHHHHHHhhC
Q 048069 165 IKGDGKIDLEEWTEFAGRN 183 (213)
Q Consensus 165 ~~~dg~It~~ef~~~l~~~ 183 (213)
..+.+.++.+.|..+|...
T Consensus 73 ~~~~~~~~~~gF~~yL~s~ 91 (581)
T PLN02222 73 LLHRNGLHLDAFFKYLFGD 91 (581)
T ss_pred hhhccCcCHHHHHHHhcCC
Confidence 1235679999999999873
No 157
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=47.20 E-value=1.7e+02 Score=24.56 Aligned_cols=77 Identities=8% Similarity=0.043 Sum_probs=45.3
Q ss_pred CCCcccHHHHHHHHhh----ccccchHHHHHHHhhhcCCCCccccHHHHHHHHHhhCCCCch--HHHHHHHhhhhcCCCC
Q 048069 29 DDGLIHKEEFQLALLR----NSSKQNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFHPSAPE--AEKITFAFRLYDLRGT 102 (213)
Q Consensus 29 ~~g~is~~ef~~~l~~----~~~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~--~~~~~~~F~~fD~d~~ 102 (213)
.||.++..|.. .... ... .....+...++|...+....++.+|+..+...+..... +..+...|++-= -|
T Consensus 68 ADG~Vse~Ei~-~~~~l~~~~~l-~~~~r~~a~~lf~~~k~~~~~l~~~~~~~~~~~~~r~~l~~~lL~~l~~vA~--AD 143 (267)
T PRK09430 68 AKGRVTEADIR-IASQLMDRMNL-HGEARRAAQQAFREGKEPDFPLREKLRQFRSVCGGRFDLLRMFLEIQIQAAF--AD 143 (267)
T ss_pred cCCCcCHHHHH-HHHHHHHHcCC-CHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH--hc
Confidence 78999999987 4322 222 22222334555555555568899999988776632111 111244455442 45
Q ss_pred CcccHHH
Q 048069 103 GYIAREE 109 (213)
Q Consensus 103 g~Is~~e 109 (213)
|.++..|
T Consensus 144 G~l~~~E 150 (267)
T PRK09430 144 GSLHPNE 150 (267)
T ss_pred CCCCHHH
Confidence 8899998
No 158
>PF13720 Acetyltransf_11: Udp N-acetylglucosamine O-acyltransferase; Domain 2; PDB: 3I3A_A 3I3X_A 3HSQ_B 2JF2_A 1LXA_A 2AQ9_A 2QIV_X 2QIA_A 2JF3_A 4EQY_F ....
Probab=40.89 E-value=94 Score=21.17 Aligned_cols=52 Identities=17% Similarity=0.120 Sum_probs=31.7
Q ss_pred CCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccccchHHHHHHHhhhcCC
Q 048069 6 WAVTVNEVEALYDLFKKLSSSIIDDGLIHKEEFQLALLRNSSKQNLFADRIFDLFDVK 63 (213)
Q Consensus 6 ~~~s~~~i~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~~~~~~~~~~~~lf~~~d~~ 63 (213)
..+|.+++..+...|..+= .+..+.++-.+.+.... ..++.+..+.+.+...
T Consensus 26 ~Gfs~~~i~~l~~ayr~l~-----~~~~~~~~a~~~l~~~~-~~~~~v~~~~~Fi~~S 77 (83)
T PF13720_consen 26 RGFSKEEISALRRAYRILF-----RSGLTLEEALEELEEEY-PDSPEVREIVDFIRNS 77 (83)
T ss_dssp TTS-HHHHHHHHHHHHHHH-----TSSS-HHHHHHHHHHHT-TSCHHHHHHHHHHHHT
T ss_pred cCCCHHHHHHHHHHHHHHH-----hCCCCHHHHHHHHHHhc-cCCHHHHHHHHHHHhC
Confidence 5689999999999999984 23356666555553322 2355666666665533
No 159
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=40.71 E-value=14 Score=28.11 Aligned_cols=58 Identities=16% Similarity=0.234 Sum_probs=31.2
Q ss_pred CccCCCCHHHHHHHHHHHH------hhcCCCCCCCcccHHHHHHHHhh-ccc-cchHHHHHHHhhhcCCC
Q 048069 3 SDFWAVTVNEVEALYDLFK------KLSSSIIDDGLIHKEEFQLALLR-NSS-KQNLFADRIFDLFDVKR 64 (213)
Q Consensus 3 ~~~~~~s~~~i~~l~~~F~------~~d~~~~~~g~is~~ef~~~l~~-~~~-~~~~~~~~lf~~~d~~~ 64 (213)
+++..+|...++++...|. ++. ..+.|+.+.|+..|.. +.. -+..+++.||..|-...
T Consensus 17 q~y~eys~kklkdvl~eF~~~g~~~~~~----~~~~Id~egF~~Fm~~yLe~d~P~~lc~hLF~sF~~~~ 82 (138)
T PF14513_consen 17 QKYSEYSTKKLKDVLKEFHGDGSLAKYN----PEEPIDYEGFKLFMKTYLEVDLPEDLCQHLFLSFQKKP 82 (138)
T ss_dssp HHHHHH----HHHHHHHH-HTSGGGGGE----ETTEE-HHHHHHHHHHHTT-S--HHHHHHHHHHS----
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcccccC----CCCCcCHHHHHHHHHHHHcCCCCHHHHHHHHHHHhCcc
Confidence 3444556666777777775 232 4558999999966633 222 37888999999997654
No 160
>KOG0998 consensus Synaptic vesicle protein EHS-1 and related EH domain proteins [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=40.18 E-value=22 Score=35.08 Aligned_cols=72 Identities=17% Similarity=0.298 Sum_probs=58.9
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccccchHHHHHHHhhhcCCCCccccHHHHHHHHHhhC
Q 048069 7 AVTVNEVEALYDLFKKLSSSIIDDGLIHKEEFQLALLRNSSKQNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFH 81 (213)
Q Consensus 7 ~~s~~~i~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~ 81 (213)
..+..+...+.++|...|.+ .+|.|+-.+....+...+.. ...+..+....|..+.|.+++.+|.-.+..+.
T Consensus 276 ~vsp~d~~~~~~if~q~d~~--~dG~I~s~~~~~~f~~~gl~-~~~l~~~w~l~d~~n~~~ls~~ef~~~~~~~~ 347 (847)
T KOG0998|consen 276 KVSPSDKQKYSKIFSQVDKD--NDGSISSNEARNIFLPFGLS-KPRLAHVWLLADTQNTGTLSKDEFALAMHLLE 347 (847)
T ss_pred ccChHHHHHHHHHHHhcccc--CCCcccccccccccccCCCC-hhhhhhhhhhcchhccCcccccccchhhhhhh
Confidence 56788888999999999999 99999999999877664433 33457788899999999999999888776554
No 161
>PLN02228 Phosphoinositide phospholipase C
Probab=39.28 E-value=1.2e+02 Score=28.60 Aligned_cols=66 Identities=15% Similarity=0.241 Sum_probs=37.9
Q ss_pred chHHHHHHHhhhcCCCCccccHHHHHHHHHhhCCCC-chHHHHHHHhhhhcCC----CCCcccHHHHHHHhhc
Q 048069 49 QNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFHPSA-PEAEKITFAFRLYDLR----GTGYIAREELCNICKS 116 (213)
Q Consensus 49 ~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~-~~~~~~~~~F~~fD~d----~~g~Is~~e~~~~~~~ 116 (213)
+.+.+..+|..+..+ +.++.++|..++...+... ...+.+..++..|... ..|.++.+.|...+.+
T Consensus 22 ~~~ei~~if~~~s~~--~~~t~~~~~~FL~~~Q~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~gF~~yl~s 92 (567)
T PLN02228 22 PPVSIKRLFEAYSRN--GKMSFDELLRFVSEVQGERHAGLDYVQDIFHSVKHHNVFHHHGLVHLNAFYRYLFS 92 (567)
T ss_pred CcHHHHHHHHHhcCC--CccCHHHHHHHHHHhcCCccCCHHHHHHHHHHhccchhhcccCccCHHHHHHHhcC
Confidence 455566666666432 4577777777776665322 2344556666666432 2356777776666555
No 162
>TIGR01848 PHA_reg_PhaR polyhydroxyalkanoate synthesis repressor PhaR. Poly-B-hydroxyalkanoates are lipidlike carbon/energy storage polymers found in granular inclusions. PhaR is a regulatory protein found in general near other proteins associated with polyhydroxyalkanoate (PHA) granule biosynthesis and utilization. It is found to be a DNA-binding homotetramer that is also capable of binding short chain hydroxyalkanoic acids and PHA granules. PhaR may regulate the expression of itself, of the phasins that coat granules, and of enzymes that direct carbon flux into polymers stored in granules.
Probab=36.57 E-value=88 Score=22.65 Aligned_cols=18 Identities=33% Similarity=0.732 Sum_probs=12.6
Q ss_pred hhhcCCCCCcccHHHHHH
Q 048069 95 RLYDLRGTGYIAREELCN 112 (213)
Q Consensus 95 ~~fD~d~~g~Is~~e~~~ 112 (213)
++||.....+||.+++.+
T Consensus 10 RLYDT~tS~YITLedi~~ 27 (107)
T TIGR01848 10 RLYDTETSSYVTLEDIRD 27 (107)
T ss_pred cccCCCccceeeHHHHHH
Confidence 567777778888888333
No 163
>COG3793 TerB Tellurite resistance protein [Inorganic ion transport and metabolism]
Probab=34.98 E-value=1.3e+02 Score=23.00 Aligned_cols=67 Identities=19% Similarity=0.211 Sum_probs=44.7
Q ss_pred CCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccC-ChHHHHHHHHHHHHHhCCCCC-CcccHHHHHH
Q 048069 101 GTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELAL-SDDVVESIVDKTMMEADIKGD-GKIDLEEWTE 178 (213)
Q Consensus 101 ~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~f~~~D~~~d-g~It~~ef~~ 178 (213)
-+|.++.+| ...++..+-..+.... ..+.+..+.+.+...++.+.+ |+++-.+.+.
T Consensus 37 adg~~~~~e----------------------~~~~~~~~~s~~~L~~f~~~~i~~~~~~~~~~~~~d~~~gk~ea~~~I~ 94 (144)
T COG3793 37 ADGEVDSEE----------------------KQKMVQFLRSSAALSVFDSNEINEIFETLVGSFDTDFEIGKREAMKEIE 94 (144)
T ss_pred cccccChHH----------------------HHHHHHHHHcChhhhhccHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHH
Confidence 468899999 6666555433333322 233555555666667777766 8899999999
Q ss_pred HHhhChhHHhh
Q 048069 179 FAGRNPTILKS 189 (213)
Q Consensus 179 ~l~~~~~~~~~ 189 (213)
.++.+++.-+.
T Consensus 95 ~lk~d~e~Ae~ 105 (144)
T COG3793 95 DLKHDTEAAED 105 (144)
T ss_pred HhcCChHHHHH
Confidence 99999875543
No 164
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=34.92 E-value=1.2e+02 Score=27.97 Aligned_cols=93 Identities=13% Similarity=0.119 Sum_probs=61.1
Q ss_pred HHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHhCC---
Q 048069 89 KITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEADI--- 165 (213)
Q Consensus 89 ~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D~--- 165 (213)
.-..+|..|-....+.|..-- +-.+|++. |..-++..+..+++.| +.+|.
T Consensus 87 leDLLFyLiaegq~ekipihK----------------------FiTALkst----GLrtsDPRLk~mMd~m-Kd~dq~~~ 139 (622)
T KOG0506|consen 87 LEDLLFYLIAEGQSEKIPIHK----------------------FITALKST----GLRTSDPRLKDMMDEM-KDVDQEEN 139 (622)
T ss_pred hhhhhhHHhhcCCcCcccHHH----------------------HHHHHHHc----CCCcCCchHHHHHHHH-HHHHhhhc
Confidence 345678888666668888877 66666555 7777777777776655 33332
Q ss_pred --CCCCcccHHHHHHHHhhChhHHhhcccchhHHHHhhhhhhHhhhh
Q 048069 166 --KGDGKIDLEEWTEFAGRNPTILKSMTLPYLKEITLAFPSFVLHSE 210 (213)
Q Consensus 166 --~~dg~It~~ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (213)
.+.+.++.+-|.+++..+-.++..- -..+-+.|+|-.|+.|-.
T Consensus 140 e~S~gw~LdKDlFKkcI~sSI~lvSqA--LrkqmVIPdw~~Fts~I~ 184 (622)
T KOG0506|consen 140 ESSSGWLLDKDLFKKCIFSSIVLVSQA--LRKQMVIPDWEEFTSHID 184 (622)
T ss_pred ccccceeecHHHHHHhhccchhHHHHH--HhcCccCCcHHHHHHHHH
Confidence 3446899999999998876665322 112225677888886643
No 165
>COG4103 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=34.69 E-value=2.1e+02 Score=21.91 Aligned_cols=86 Identities=17% Similarity=0.182 Sum_probs=53.7
Q ss_pred HHHHhhcCCCCCCCcccHHHHHHH---HhhccccchHHHHHHHhhhcCCCCccccHHHHHHHHHhhCCCCchHHHHHHHh
Q 048069 18 DLFKKLSSSIIDDGLIHKEEFQLA---LLRNSSKQNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFHPSAPEAEKITFAF 94 (213)
Q Consensus 18 ~~F~~~d~~~~~~g~is~~ef~~~---l~~~~~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F 94 (213)
-+|..+. .||.++..|.... +.....-+......+......-+...+++..|-..+..-.......+.+..++
T Consensus 34 Llf~Vm~----ADG~v~~~E~~a~r~il~~~f~i~~~~l~ali~~~e~~~~Ea~d~y~fts~l~r~Ld~e~R~eli~~mw 109 (148)
T COG4103 34 LLFHVME----ADGTVSESEREAFRAILKENFGIDGEELDALIEAGEEAGYEAIDLYSFTSVLKRHLDEEQRLELIGLMW 109 (148)
T ss_pred HHHHHHh----cccCcCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 5677776 7788888886632 22222234445577777776666778888888887765432222334444455
Q ss_pred hhhcCCCCCcccHHH
Q 048069 95 RLYDLRGTGYIAREE 109 (213)
Q Consensus 95 ~~fD~d~~g~Is~~e 109 (213)
++- ..||.++..|
T Consensus 110 eIa--~ADg~l~e~E 122 (148)
T COG4103 110 EIA--YADGELDESE 122 (148)
T ss_pred HHH--HccccccHHH
Confidence 554 4678888888
No 166
>cd02977 ArsC_family Arsenate Reductase (ArsC) family; composed of TRX-fold arsenic reductases and similar proteins including the transcriptional regulator, Spx. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX), through a single catalytic cysteine. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases. Spx is a general regulator that exerts negative and positive control over transcription initiation by binding to the C-terminal domain of the alpha subunit of RNA polymerase.
Probab=34.53 E-value=72 Score=22.28 Aligned_cols=30 Identities=17% Similarity=0.309 Sum_probs=22.7
Q ss_pred HHHHhCCCCCCcccHHHHHHHHhhChhHHh
Q 048069 159 TMMEADIKGDGKIDLEEWTEFAGRNPTILK 188 (213)
Q Consensus 159 ~f~~~D~~~dg~It~~ef~~~l~~~~~~~~ 188 (213)
.++..+.+....++-+|+++++..+|.+++
T Consensus 62 ~~~~l~~~~~~~ls~~e~~~~l~~~p~Lik 91 (105)
T cd02977 62 PYRKLGLADKDELSDEEALELMAEHPKLIK 91 (105)
T ss_pred hHHHcCCccccCCCHHHHHHHHHhCcCeee
Confidence 345555443457899999999999999875
No 167
>KOG2419 consensus Phosphatidylserine decarboxylase [Lipid transport and metabolism]
Probab=34.42 E-value=41 Score=32.12 Aligned_cols=67 Identities=24% Similarity=0.350 Sum_probs=48.1
Q ss_pred hHHHHHHHhhhcCCCCccccHHHHHHHHHhhCC----C----CchHHHHHHHhhhhcCCCC-------------------
Q 048069 50 NLFADRIFDLFDVKRNGVIEFGEFVRSLSIFHP----S----APEAEKITFAFRLYDLRGT------------------- 102 (213)
Q Consensus 50 ~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~----~----~~~~~~~~~~F~~fD~d~~------------------- 102 (213)
.....+++..+|.+.++.++|.+|......+-. . .+..-.+.-.|...|.+++
T Consensus 436 ~c~~~~~~s~~d~~~~fk~sf~~~~~l~~~F~~vvaa~~~~~~D~~~~k~~~~~~lDl~g~~~~~~~~~~lYs~vS~~~~ 515 (975)
T KOG2419|consen 436 ECFAKRILSIVDYEEDFKLSFSEFSDLSFAFGNVVAANKLAWFDMLNEKEELFKALDLNGDPAHAPKQPVLYSYVSYPFL 515 (975)
T ss_pred hhhhhhcccccccccCceEeeehHHHHHHHHHHHHHhhhcchhhhcccchhheehhhccCCcccCccccchhhhcccccc
Confidence 334578899999999999999999886554321 0 0111235567888899888
Q ss_pred ----CcccHHHHHHHhhc
Q 048069 103 ----GYIAREELCNICKS 116 (213)
Q Consensus 103 ----g~Is~~e~~~~~~~ 116 (213)
|.++.+|..+++..
T Consensus 516 ~~s~~~vtVDe~v~ll~~ 533 (975)
T KOG2419|consen 516 KKSFGVVTVDELVALLAL 533 (975)
T ss_pred ccccCeeEHHHHHHHHHH
Confidence 99999997776555
No 168
>PLN02222 phosphoinositide phospholipase C 2
Probab=34.40 E-value=1.3e+02 Score=28.56 Aligned_cols=66 Identities=12% Similarity=0.221 Sum_probs=42.8
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhcccc---chHHHHHHHhhhcC-CCCccccHHHHHHHHHh
Q 048069 7 AVTVNEVEALYDLFKKLSSSIIDDGLIHKEEFQLALLRNSSK---QNLFADRIFDLFDV-KRNGVIEFGEFVRSLSI 79 (213)
Q Consensus 7 ~~s~~~i~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~~~~~---~~~~~~~lf~~~d~-~~~g~I~f~ef~~~~~~ 79 (213)
...+.+|..|+.. +. +++.|+.++|...|...... ....+..+++.+.. ...+.++++.|..++..
T Consensus 21 ~~~~~ei~~if~~---~~----~~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~gF~~yL~s 90 (581)
T PLN02222 21 SEAPREIKTIFEK---YS----ENGVMTVDHLHRFLIDVQKQDKATREDAQSIINSASSLLHRNGLHLDAFFKYLFG 90 (581)
T ss_pred CCCcHHHHHHHHH---hc----CCCCcCHHHHHHHHHHhcCCccCCHHHHHHHHHhhhhhhhccCcCHHHHHHHhcC
Confidence 3445555555554 43 34689999999888554432 33456677776542 23567999999998864
No 169
>PF08414 NADPH_Ox: Respiratory burst NADPH oxidase; InterPro: IPR013623 This domain is found in plant proteins such as respiratory burst NADPH oxidase proteins which produce reactive oxygen species as a defence mechanism. It tends to occur to the N terminus of an EF-hand (IPR002048 from INTERPRO), which suggests a direct regulatory effect of Ca2+ on the activity of the NADPH oxidase in plants []. ; GO: 0004601 peroxidase activity, 0050664 oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor, 0055114 oxidation-reduction process; PDB: 3A8R_A.
Probab=33.01 E-value=1.8e+02 Score=20.75 Aligned_cols=60 Identities=20% Similarity=0.294 Sum_probs=33.7
Q ss_pred HHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHhCCCCCC
Q 048069 90 ITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEADIKGDG 169 (213)
Q Consensus 90 ~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dg 169 (213)
++.-|..+-+ +|++..++ +.+.+ |-.-+.+-..++.+.+-+.-... .+
T Consensus 32 VE~RFd~La~--dG~L~rs~----------------------Fg~CI-------GM~dSkeFA~eLFdALaRrr~i~-~~ 79 (100)
T PF08414_consen 32 VEKRFDKLAK--DGLLPRSD----------------------FGECI-------GMKDSKEFAGELFDALARRRGIK-GD 79 (100)
T ss_dssp HHHHHHHH-B--TTBEEGGG----------------------HHHHH-------T--S-HHHHHHHHHHHHHHTT---SS
T ss_pred HHHHHHHhCc--CCcccHHH----------------------HHHhc-------CCcccHHHHHHHHHHHHHhcCCc-cC
Confidence 4444555554 89999999 66655 44444555555555554555555 35
Q ss_pred cccHHHHHHHHh
Q 048069 170 KIDLEEWTEFAG 181 (213)
Q Consensus 170 ~It~~ef~~~l~ 181 (213)
.|+.+|+..+-.
T Consensus 80 ~I~k~eL~efW~ 91 (100)
T PF08414_consen 80 SITKDELKEFWE 91 (100)
T ss_dssp EE-HHHHHHHHH
T ss_pred CcCHHHHHHHHH
Confidence 799999877654
No 170
>cd03035 ArsC_Yffb Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC. The structure of Yffb and the conservation of the catalytic cysteine suggest that it is likely to function as a glutathione (GSH)-dependent thiol reductase. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from GSH via glutaredoxin, through a single catalytic cysteine.
Probab=32.72 E-value=53 Score=23.37 Aligned_cols=31 Identities=16% Similarity=0.210 Sum_probs=22.3
Q ss_pred HHHHhCCCCCCcccHHHHHHHHhhChhHHhh
Q 048069 159 TMMEADIKGDGKIDLEEWTEFAGRNPTILKS 189 (213)
Q Consensus 159 ~f~~~D~~~dg~It~~ef~~~l~~~~~~~~~ 189 (213)
.++..+.+....++-++++.+|..+|.+++.
T Consensus 60 ~yk~l~l~~~~~~s~~e~~~~l~~~p~LikR 90 (105)
T cd03035 60 TWRKLDDAQKAALDAAKAIALMLEHPSLIKR 90 (105)
T ss_pred HHHhCChhhhccCCHHHHHHHHHhCcCeeec
Confidence 3455544422358899999999999998864
No 171
>cd07176 terB tellurite resistance protein terB. This family contains uncharacterized bacterial proteins involved in tellurium resistance. The prototype of this CD is the Kp-terB protein from Klebsiella pneumoniae, whose 3D structure was recently determined. The biological function of terB and the mechanism responsible for tellurium resistance are unknown.
Probab=30.79 E-value=96 Score=21.46 Aligned_cols=79 Identities=18% Similarity=0.183 Sum_probs=40.7
Q ss_pred CCCcccHHHHHHHHhhccc---cchHHHHHHHhhhcCCCCc--cccHHHHHHHHHhhCCCCchHHHHHHHhhhhcCCCCC
Q 048069 29 DDGLIHKEEFQLALLRNSS---KQNLFADRIFDLFDVKRNG--VIEFGEFVRSLSIFHPSAPEAEKITFAFRLYDLRGTG 103 (213)
Q Consensus 29 ~~g~is~~ef~~~l~~~~~---~~~~~~~~lf~~~d~~~~g--~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~fD~d~~g 103 (213)
.||.++..|.......... ........+...++.-... ..+..++...+....+.......+..++..- .-||
T Consensus 15 aDG~v~~~E~~~i~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ia--~aDG 92 (111)
T cd07176 15 ADGDIDDAELQAIEALLRSLPVLSGFDRERLIALLDKLLALLRPEGLAALLKAAAKLLPPELRETAFAVAVDIA--AADG 92 (111)
T ss_pred hccCCCHHHHHHHHHHHHcCccccCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhCCHHHHHHHHHHHHHHH--HccC
Confidence 5777888887744322210 0111122333333322222 4456777777777663223334455555555 3568
Q ss_pred cccHHH
Q 048069 104 YIAREE 109 (213)
Q Consensus 104 ~Is~~e 109 (213)
.++..|
T Consensus 93 ~~~~~E 98 (111)
T cd07176 93 EVDPEE 98 (111)
T ss_pred CCCHHH
Confidence 899988
No 172
>KOG4403 consensus Cell surface glycoprotein STIM, contains SAM domain [General function prediction only]
Probab=29.79 E-value=83 Score=28.57 Aligned_cols=47 Identities=23% Similarity=0.064 Sum_probs=32.2
Q ss_pred CCCccccHHHHHHHHHhhCCCC---chHHHHHHHhhhhcCCCCCcccHHH
Q 048069 63 KRNGVIEFGEFVRSLSIFHPSA---PEAEKITFAFRLYDLRGTGYIAREE 109 (213)
Q Consensus 63 ~~~g~I~f~ef~~~~~~~~~~~---~~~~~~~~~F~~fD~d~~g~Is~~e 109 (213)
.++...+-.||+.+....+..+ ..-+.++.+-+.+|.|.+|.|+.+|
T Consensus 40 agds~at~nefc~~~~~~c~s~~dklg~EAir~iHrqmDDD~nG~Id~~E 89 (575)
T KOG4403|consen 40 AGDSRATRNEFCEVDAPECKSEQDKLGYEAIRDIHRQMDDDHNGSIDVEE 89 (575)
T ss_pred cCCchhhhccchhcCCchhhcccchhhHHHHHHHHHhcccccCCCccccc
Confidence 4455666677766655444322 2346778888888889999999988
No 173
>PF03960 ArsC: ArsC family; InterPro: IPR006660 Several bacterial taxon have a chromosomal resistance system, encoded by the ars operon, for the detoxification of arsenate, arsenite, and antimonite []. This system transports arsenite and antimonite out of the cell. The pump is composed of two polypeptides, the products of the arsA and arsB genes. This two-subunit enzyme produces resistance to arsenite and antimonite. Arsenate, however, must first be reduced to arsenite before it is extruded. A third gene, arsC, expands the substrate specificity to allow for arsenate pumping and resistance. ArsC is an approximately 150-residue arsenate reductase that uses reduced glutathione (GSH) to convert arsenate to arsenite with a redox active cysteine residue in the active site. ArsC forms an active quaternary complex with GSH, arsenate, and glutaredoxin 1 (Grx1). The three ligands must be present simultaneously for reduction to occur []. The arsC family also comprises the Spx proteins which are GRAM-positive bacterial transcription factors that regulate the transcription of multiple genes in response to disulphide stress []. The arsC protein structure has been solved []. It belongs to the thioredoxin superfamily fold which is defined by a beta-sheet core surrounded by alpha-helices. The active cysteine residue of ArsC is located in the loop between the first beta-strand and the first helix, which is also conserved in the Spx protein and its homologues.; PDB: 2KOK_A 1SK1_A 1SK2_A 1JZW_A 1J9B_A 1S3C_A 1SD8_A 1SD9_A 1I9D_A 1SK0_A ....
Probab=29.70 E-value=56 Score=23.18 Aligned_cols=29 Identities=24% Similarity=0.261 Sum_probs=20.8
Q ss_pred HHhCCCCCCcccHHHHHHHHhhChhHHhh
Q 048069 161 MEADIKGDGKIDLEEWTEFAGRNPTILKS 189 (213)
Q Consensus 161 ~~~D~~~dg~It~~ef~~~l~~~~~~~~~ 189 (213)
+..+......++-+|++++|..+|.+++.
T Consensus 61 k~l~~~~~~~~s~~e~i~~l~~~p~LikR 89 (110)
T PF03960_consen 61 KELGKLKKDDLSDEELIELLLENPKLIKR 89 (110)
T ss_dssp HHTTHHHCTTSBHHHHHHHHHHSGGGB-S
T ss_pred hhhhhhhhhhhhhHHHHHHHHhChhheeC
Confidence 45441223468999999999999998874
No 174
>TIGR02675 tape_meas_nterm tape measure domain. Proteins containing this domain are strictly bacterial, including bacteriophage and prophage regions of bacterial genomes. Most members are 800 to 1800 amino acids long, making them among the longest predicted proteins of their respective phage genomes, where they are encoded in tail protein regions. This roughly 80-residue domain described here usually begins between residue 100 and 250. Many members are known or predicted to act as phage tail tape measure proteins, a minor tail component that regulates tail length.
Probab=28.90 E-value=1e+02 Score=20.52 Aligned_cols=16 Identities=19% Similarity=0.426 Sum_probs=11.9
Q ss_pred CCCcccHHHHHHHhhc
Q 048069 101 GTGYIAREELCNICKS 116 (213)
Q Consensus 101 ~~g~Is~~e~~~~~~~ 116 (213)
..|.++.+||..++..
T Consensus 27 ~~Gkv~~ee~n~~~e~ 42 (75)
T TIGR02675 27 ASGKLRGEEINSLLEA 42 (75)
T ss_pred HcCcccHHHHHHHHHH
Confidence 5789999997766544
No 175
>PF08976 DUF1880: Domain of unknown function (DUF1880); InterPro: IPR015070 This entry represents EF-hand calcium-binding domain-containing protein 6 that negatively regulates the androgen receptor by recruiting histone deacetylase complex, and protein DJ-1 antagonises this inhibition by abrogation of this complex [].; PDB: 1WLZ_C.
Probab=28.53 E-value=57 Score=24.02 Aligned_cols=34 Identities=15% Similarity=0.337 Sum_probs=21.0
Q ss_pred cCChHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHhhC
Q 048069 146 ALSDDVVESIVDKTMMEADIKGDGKIDLEEWTEFAGRN 183 (213)
Q Consensus 146 ~~~~~~~~~~~~~~f~~~D~~~dg~It~~ef~~~l~~~ 183 (213)
.+++++++.+- .++-.|..|.|.|.||+.-+...
T Consensus 3 iLtDeQFdrLW----~e~Pvn~~GrLkY~eFL~kfs~e 36 (118)
T PF08976_consen 3 ILTDEQFDRLW----NEMPVNAKGRLKYQEFLSKFSSE 36 (118)
T ss_dssp ---HHHHHHHH----TTS-B-TTS-EEHHHHHHHT---
T ss_pred cccHHHhhhhh----hhCcCCccCCEeHHHHHHHcccc
Confidence 35677775555 88888999999999999988754
No 176
>PF09851 SHOCT: Short C-terminal domain; InterPro: IPR018649 This family of hypothetical prokaryotic proteins has no known function.
Probab=28.49 E-value=1.1e+02 Score=16.68 Aligned_cols=23 Identities=35% Similarity=0.686 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHhhcCCCCCCCcccHHHHHHH
Q 048069 11 NEVEALYDLFKKLSSSIIDDGLIHKEEFQLA 41 (213)
Q Consensus 11 ~~i~~l~~~F~~~d~~~~~~g~is~~ef~~~ 41 (213)
++++.+...+ .+|.||.+||...
T Consensus 3 ~~L~~L~~l~--------~~G~IseeEy~~~ 25 (31)
T PF09851_consen 3 DRLEKLKELY--------DKGEISEEEYEQK 25 (31)
T ss_pred HHHHHHHHHH--------HcCCCCHHHHHHH
Confidence 3455555544 6788999988854
No 177
>TIGR01848 PHA_reg_PhaR polyhydroxyalkanoate synthesis repressor PhaR. Poly-B-hydroxyalkanoates are lipidlike carbon/energy storage polymers found in granular inclusions. PhaR is a regulatory protein found in general near other proteins associated with polyhydroxyalkanoate (PHA) granule biosynthesis and utilization. It is found to be a DNA-binding homotetramer that is also capable of binding short chain hydroxyalkanoic acids and PHA granules. PhaR may regulate the expression of itself, of the phasins that coat granules, and of enzymes that direct carbon flux into polymers stored in granules.
Probab=28.26 E-value=2.2e+02 Score=20.66 Aligned_cols=41 Identities=12% Similarity=0.239 Sum_probs=28.9
Q ss_pred hhhcCCCCccccHHHHHHHHHhhCCCCchHHHHHHHhhhhcCCCCCcccHHH
Q 048069 58 DLFDVKRNGVIEFGEFVRSLSIFHPSAPEAEKITFAFRLYDLRGTGYIAREE 109 (213)
Q Consensus 58 ~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~fD~d~~g~Is~~e 109 (213)
+++|+..+.+|+.++...++..-. -|+..|..-..-||..=
T Consensus 10 RLYDT~tS~YITLedi~~lV~~g~-----------~f~V~DakTgeDiT~~i 50 (107)
T TIGR01848 10 RLYDTETSSYVTLEDIRDLVREGR-----------EFQVVDSKSGDDLTRSI 50 (107)
T ss_pred cccCCCccceeeHHHHHHHHHCCC-----------eEEEEECCCCchhHHHH
Confidence 367888888999999888886544 36666655555566665
No 178
>KOG3449 consensus 60S acidic ribosomal protein P2 [Translation, ribosomal structure and biogenesis]
Probab=28.01 E-value=1.8e+02 Score=21.17 Aligned_cols=54 Identities=24% Similarity=0.387 Sum_probs=38.6
Q ss_pred HHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHhCCCCCC
Q 048069 90 ITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEADIKGDG 169 (213)
Q Consensus 90 ~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D~~~dg 169 (213)
+-.+|-++...++...+..+ ++.++.++ |....++.++.++ +... |
T Consensus 3 yvaAYLL~~lgGn~~psa~D----------------------ikkIl~sV----G~E~d~e~i~~vi----sel~----G 48 (112)
T KOG3449|consen 3 YVAAYLLAVLGGNASPSASD----------------------IKKILESV----GAEIDDERINLVL----SELK----G 48 (112)
T ss_pred HHHHHHHHHhcCCCCCCHHH----------------------HHHHHHHh----CcccCHHHHHHHH----HHhc----C
Confidence 34567777888888899999 88888777 7888888886665 6553 3
Q ss_pred cccHHHHHH
Q 048069 170 KIDLEEWTE 178 (213)
Q Consensus 170 ~It~~ef~~ 178 (213)
+ +.+|.+.
T Consensus 49 K-~i~ElIA 56 (112)
T KOG3449|consen 49 K-DIEELIA 56 (112)
T ss_pred C-CHHHHHH
Confidence 3 5566554
No 179
>cd03032 ArsC_Spx Arsenate Reductase (ArsC) family, Spx subfamily; Spx is a unique RNA polymerase (RNAP)-binding protein present in bacilli and some mollicutes. It inhibits transcription by binding to the C-terminal domain of the alpha subunit of RNAP, disrupting complex formation between RNAP and certain transcriptional activator proteins like ResD and ComA. In response to oxidative stress, Spx can also activate transcription, making it a general regulator that exerts both positive and negative control over transcription initiation. Spx has been shown to exert redox-sensitive transcriptional control over genes like trxA (TRX) and trxB (TRX reductase), genes that function in thiol homeostasis. This redox-sensitive activity is dependent on the presence of a CXXC motif, present in some members of the Spx subfamily, that acts as a thiol/disulfide switch. Spx has also been shown to repress genes in a sulfate-dependent manner independent of the presence of the CXXC motif.
Probab=26.62 E-value=1.8e+02 Score=20.70 Aligned_cols=30 Identities=17% Similarity=0.399 Sum_probs=22.4
Q ss_pred HHHHhCCCCCCcccHHHHHHHHhhChhHHhh
Q 048069 159 TMMEADIKGDGKIDLEEWTEFAGRNPTILKS 189 (213)
Q Consensus 159 ~f~~~D~~~dg~It~~ef~~~l~~~~~~~~~ 189 (213)
.++....+. ..++-+|+++++..+|.+++.
T Consensus 63 ~~k~l~~~~-~~ls~~e~i~~l~~~p~LikR 92 (115)
T cd03032 63 AFKNLNIDI-DELSLSELIRLISEHPSLLRR 92 (115)
T ss_pred HHHHcCCCc-ccCCHHHHHHHHHhChhheeC
Confidence 345554443 458999999999999999874
No 180
>KOG1264 consensus Phospholipase C [Lipid transport and metabolism]
Probab=26.58 E-value=6.3e+02 Score=25.40 Aligned_cols=73 Identities=16% Similarity=0.149 Sum_probs=45.8
Q ss_pred CCCCHHHHHH-HHHHHHhhcCCCCCCCcccHHHHHHHHhhccccchHHHHHHHhhhcC--CCCccccHHHHHHHHHhhC
Q 048069 6 WAVTVNEVEA-LYDLFKKLSSSIIDDGLIHKEEFQLALLRNSSKQNLFADRIFDLFDV--KRNGVIEFGEFVRSLSIFH 81 (213)
Q Consensus 6 ~~~s~~~i~~-l~~~F~~~d~~~~~~g~is~~ef~~~l~~~~~~~~~~~~~lf~~~d~--~~~g~I~f~ef~~~~~~~~ 81 (213)
.++++.+|.. ++..+-..|.+ .-..|+..+++..|......-.. .+-+-+.+.. -+++.++|++|..+...+.
T Consensus 135 ~a~~p~qI~~wlrk~~ysvd~~--~~~~isard~k~~l~qvn~k~~~-~kfl~e~~ted~~~k~dlsf~~f~~ly~~lm 210 (1267)
T KOG1264|consen 135 NAPTPLQIERWLRKQIYSVDQT--RENSISARDLKTILPQVNFKVSS-AKFLKEKFTEDGARKDDLSFEQFHLLYKKLM 210 (1267)
T ss_pred cCCChHHHHHHHHhhheeccch--hhhheeHHhhhcccccceEEech-HHHHHHHHhHhhhccccccHHHHHHHHHHHh
Confidence 4566777665 46777788876 66679999999877443322111 1222233322 2467899999999877654
No 181
>PF07879 PHB_acc_N: PHB/PHA accumulation regulator DNA-binding domain; InterPro: IPR012909 This domain is found at the N terminus of the polyhydroxyalkanoate (PHA) synthesis regulators. These regulators have been shown to directly bind DNA and PHA []. The invariant nature of this domain compared to the C-terminal IPR007897 from INTERPRO domain(s) suggests that it contains the DNA-binding function.
Probab=25.92 E-value=57 Score=21.32 Aligned_cols=17 Identities=41% Similarity=0.802 Sum_probs=14.8
Q ss_pred hhhcCCCCCcccHHHHH
Q 048069 95 RLYDLRGTGYIAREELC 111 (213)
Q Consensus 95 ~~fD~d~~g~Is~~e~~ 111 (213)
++||.....+||.+++.
T Consensus 10 RLYDT~~s~YiTL~di~ 26 (64)
T PF07879_consen 10 RLYDTETSSYITLEDIA 26 (64)
T ss_pred ccccCCCceeEeHHHHH
Confidence 67899999999999933
No 182
>PRK13344 spxA transcriptional regulator Spx; Reviewed
Probab=24.78 E-value=2e+02 Score=21.36 Aligned_cols=29 Identities=28% Similarity=0.358 Sum_probs=21.6
Q ss_pred HHHhCCCCCCcccHHHHHHHHhhChhHHhh
Q 048069 160 MMEADIKGDGKIDLEEWTEFAGRNPTILKS 189 (213)
Q Consensus 160 f~~~D~~~dg~It~~ef~~~l~~~~~~~~~ 189 (213)
++..+.+. ..++-++++.++..+|.+++.
T Consensus 64 ~k~L~~~~-~~ls~~e~i~ll~~~P~LikR 92 (132)
T PRK13344 64 AKALDCDI-EELSVNEVIDLIQENPRILKS 92 (132)
T ss_pred HHhCCcch-hcCCHHHHHHHHHhCccceeC
Confidence 45554333 468899999999999998873
No 183
>PF07105 DUF1367: Protein of unknown function (DUF1367); InterPro: IPR009797 This entry is represented by Bacteriophage VT2phi_272, P37. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several highly conserved, hypothetical bacterial and phage proteins of around 200 resides in length. The function of this family is unknown.
Probab=24.36 E-value=2.8e+02 Score=22.39 Aligned_cols=80 Identities=11% Similarity=0.265 Sum_probs=42.5
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHhCCC-
Q 048069 88 EKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEADIK- 166 (213)
Q Consensus 88 ~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D~~- 166 (213)
..+...|..+-+. .|.||..| ..++.+ +.+.+... .|.+ ..+.++.+......-.+
T Consensus 52 aLL~lgFeyW~P~-gg~is~~E-~~lv~g---------------~v~~la~~---~g~~---~~l~~~A~~yL~~va~~R 108 (196)
T PF07105_consen 52 ALLNLGFEYWEPT-GGTISPAE-RKLVRG---------------FVKFLASY---AGSE---DALQEAADQYLAKVAKKR 108 (196)
T ss_pred HHHHHHHHHccCC-CCccCHHH-HHHHHH---------------HHHHHHHH---hCCH---HHHHHHHHHHHHHHHHHh
Confidence 3566778887654 48899998 333333 33333332 2221 34444444444433332
Q ss_pred ---CCCcccHHHHHHHHhhChhHHhhc
Q 048069 167 ---GDGKIDLEEWTEFAGRNPTILKSM 190 (213)
Q Consensus 167 ---~dg~It~~ef~~~l~~~~~~~~~~ 190 (213)
....=+++.|++++.--.......
T Consensus 109 ~~~~~~~k~feafR~wvti~AG~yd~~ 135 (196)
T PF07105_consen 109 ARDIEAEKSFEAFRKWVTIEAGFYDIV 135 (196)
T ss_pred hccchhhhCHHHHHHHHHHhcccceee
Confidence 233456788888886655544444
No 184
>PTZ00373 60S Acidic ribosomal protein P2; Provisional
Probab=24.18 E-value=2.2e+02 Score=20.77 Aligned_cols=40 Identities=20% Similarity=0.399 Sum_probs=28.6
Q ss_pred HHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHH
Q 048069 91 TFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIV 156 (213)
Q Consensus 91 ~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 156 (213)
-.+|-+.-..++..+|.++ ++.++... |....+.++..++
T Consensus 6 vaAYlL~~lgG~~~pTadd----------------------I~kIL~Aa----GveVd~~~~~l~~ 45 (112)
T PTZ00373 6 VAAYLMCVLGGNENPTKKE----------------------VKNVLSAV----NADVEDDVLDNFF 45 (112)
T ss_pred HHHHHHHHHcCCCCCCHHH----------------------HHHHHHHc----CCCccHHHHHHHH
Confidence 3456666667788899999 77777666 7777777776555
No 185
>PRK03095 prsA peptidylprolyl isomerase; Reviewed
Probab=24.16 E-value=4.4e+02 Score=22.21 Aligned_cols=73 Identities=18% Similarity=0.118 Sum_probs=42.7
Q ss_pred CCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHhCC------CCCCcccHH
Q 048069 101 GTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEADI------KGDGKIDLE 174 (213)
Q Consensus 101 ~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D~------~~dg~It~~ 174 (213)
.+|.||.+|+...+.. ...-.+|.+++.......+...++.++++.++.+-+.+.. ... .+|++
T Consensus 31 ~~~~IT~~e~~~~~k~---------~~~~~~L~~~I~~~l~~~~i~vs~~evd~~i~~i~~~~~~~f~~~L~~~-g~s~~ 100 (287)
T PRK03095 31 KAGDITKDEFYEQMKT---------QAGKQVLNNMVMEKVLIKNYKVEDKEVDKKYDEMKKQYGDQFDTLLKQQ-GIKEE 100 (287)
T ss_pred cCCcccHHHHHHHHHH---------HHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHc-CCCHH
Confidence 4578999998776554 1122234444433322336678888888887776555421 112 36777
Q ss_pred HHHHHHhhC
Q 048069 175 EWTEFAGRN 183 (213)
Q Consensus 175 ef~~~l~~~ 183 (213)
+|...++..
T Consensus 101 ~~r~~lr~~ 109 (287)
T PRK03095 101 TLKTGVRAQ 109 (287)
T ss_pred HHHHHHHHH
Confidence 777666554
No 186
>PF05872 DUF853: Bacterial protein of unknown function (DUF853); InterPro: IPR008571 Members of this family have a P-loop containing nucleotide triphosphate hydrolases fold. This family is restricted to bacterial proteins, none of which have currently been characterised.
Probab=24.09 E-value=5e+02 Score=24.06 Aligned_cols=120 Identities=15% Similarity=0.228 Sum_probs=70.3
Q ss_pred hHHHHHHHhhhcCCCCccccHHHHHHHHHhhCCCCchHHHHHHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHH
Q 048069 50 NLFADRIFDLFDVKRNGVIEFGEFVRSLSIFHPSAPEAEKITFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLL 129 (213)
Q Consensus 50 ~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~ 129 (213)
......+|+..|.++=--|+.+++..++..+.. ..+..-..| |.|+....-++.
T Consensus 127 ~gvL~i~F~~ADd~gLlLlDLkDLra~l~~v~e------~~~e~~~~y-----G~is~aS~gaI~--------------- 180 (502)
T PF05872_consen 127 EGVLNIVFRIADDEGLLLLDLKDLRAMLQYVSE------NAKELSAEY-----GNISSASIGAIQ--------------- 180 (502)
T ss_pred HHHHHHHHHHhccCCCccccHHHHHHHHHHHHh------hHHHHHHHc-----CCccHHHHHHHH---------------
Confidence 334577888888877777888888888777642 122222222 778888744432
Q ss_pred HHHHHHHHHHhhhcc--ccCChHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHhhChhHHhhcccchhHHHHhhhhh
Q 048069 130 WKLKEMVVSLLSESE--LALSDDVVESIVDKTMMEADIKGDGKIDLEEWTEFAGRNPTILKSMTLPYLKEITLAFPS 204 (213)
Q Consensus 130 ~~l~~~l~~~~~~~~--~~~~~~~~~~~~~~~f~~~D~~~dg~It~~ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 204 (213)
+.++..-.+.+. ..-+.=.+++++ ..|.++.|.|+.-+.-+.+. .|.++..|.+-.++++-...|.
T Consensus 181 ---R~ll~LE~qG~d~FFGEPaldi~Dl~-----r~~~~GrG~IniL~a~~l~~-~P~LysTFLLwLLsELfe~LPE 248 (502)
T PF05872_consen 181 ---RALLVLEQQGGDQFFGEPALDIEDLM-----RTDADGRGVINILAADKLMN-SPKLYSTFLLWLLSELFEQLPE 248 (502)
T ss_pred ---HHHHHHHHcchHhhCCCccCCHHHHh-----ccCCCCCEEEEEEEhHhhhh-CcHHHHHHHHHHHHHHHHhCcc
Confidence 222211101000 111112233333 55678889999888877766 8888888877777776655554
No 187
>PRK10026 arsenate reductase; Provisional
Probab=23.84 E-value=1.3e+02 Score=22.84 Aligned_cols=31 Identities=16% Similarity=0.342 Sum_probs=23.4
Q ss_pred HHHHHhCCCCCCcccHHHHHHHHhhChhHHhh
Q 048069 158 KTMMEADIKGDGKIDLEEWTEFAGRNPTILKS 189 (213)
Q Consensus 158 ~~f~~~D~~~dg~It~~ef~~~l~~~~~~~~~ 189 (213)
..++....+.+ .++.++++.+|..+|.+++.
T Consensus 64 ~~yr~L~~~~~-~ls~~e~l~ll~~~P~LIKR 94 (141)
T PRK10026 64 EPYEELGLAED-KFTDDQLIDFMLQHPILINR 94 (141)
T ss_pred chHHHcCCCcc-CCCHHHHHHHHHhCccceeC
Confidence 34566655544 48999999999999998874
No 188
>cd03034 ArsC_ArsC Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli. E. coli ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], the first step in the detoxification of arsenic, using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX). ArsC contains a single catalytic cysteine, within a thioredoxin fold, that forms a covalent thiolate-As(V) intermediate, which is reduced by GRX through a mixed GSH-arsenate intermediate. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases.
Probab=23.79 E-value=1.6e+02 Score=20.96 Aligned_cols=29 Identities=14% Similarity=0.261 Sum_probs=22.0
Q ss_pred HHHhCCCCCCcccHHHHHHHHhhChhHHhh
Q 048069 160 MMEADIKGDGKIDLEEWTEFAGRNPTILKS 189 (213)
Q Consensus 160 f~~~D~~~dg~It~~ef~~~l~~~~~~~~~ 189 (213)
++....+. ..++-++++..+..+|.+++.
T Consensus 63 y~~l~~~~-~~ls~~e~i~ll~~~P~LikR 91 (112)
T cd03034 63 YKELGLAD-PELSDEELIDAMAAHPILIER 91 (112)
T ss_pred HHHcCCCc-cCCCHHHHHHHHHhCcCcccC
Confidence 44444443 468999999999999999874
No 189
>PLN02230 phosphoinositide phospholipase C 4
Probab=23.74 E-value=3.2e+02 Score=26.06 Aligned_cols=67 Identities=4% Similarity=-0.076 Sum_probs=38.7
Q ss_pred chHHHHHHHhhhcCCCCccccHHHHHHHHHhhCCCC--chHHHHHHHhhhh-------cCCCCCcccHHHHHHHhhc
Q 048069 49 QNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFHPSA--PEAEKITFAFRLY-------DLRGTGYIAREELCNICKS 116 (213)
Q Consensus 49 ~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~--~~~~~~~~~F~~f-------D~d~~g~Is~~e~~~~~~~ 116 (213)
+...+..+|..+..++ +.++.++|..++...+... ...+.+..++..+ ..-+.+.++.+.|...+.+
T Consensus 27 p~~ei~~lf~~~s~~~-~~mt~~~l~~FL~~~Q~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~F~~yL~s 102 (598)
T PLN02230 27 PVADVRDLFEKYADGD-AHMSPEQLQKLMAEEGGGEGETSLEEAERIVDEVLRRKHHIAKFTRRNLTLDDFNYYLFS 102 (598)
T ss_pred CcHHHHHHHHHHhCCC-CccCHHHHHHHHHHhCCCcccCCHHHHHHHHHHHHhhccccccccccccCHHHHHHHHcC
Confidence 4556677777775443 5777777777777766321 1334444444433 1123445777877666555
No 190
>PF14003 YlbE: YlbE-like protein
Probab=23.28 E-value=66 Score=21.10 Aligned_cols=35 Identities=20% Similarity=0.239 Sum_probs=28.5
Q ss_pred HHHHHHHhhChhHHhhcccchhHHHHhhhhhhHhh
Q 048069 174 EEWTEFAGRNPTILKSMTLPYLKEITLAFPSFVLH 208 (213)
Q Consensus 174 ~ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (213)
..|...|+++|.-+..|.....-.-..+||+-|-.
T Consensus 12 P~WYR~LsR~P~~l~~fe~~a~~~y~kT~p~rVek 46 (65)
T PF14003_consen 12 PIWYRILSRNPEELEAFEKEAKHFYKKTIPHRVEK 46 (65)
T ss_pred cHHHHHHccCHHHHHHHHHHHHHHHhccccHHHHH
Confidence 46888899999999999888887788888887743
No 191
>KOG4070 consensus Putative signal transduction protein p25 [General function prediction only; Signal transduction mechanisms]
Probab=23.12 E-value=3.1e+02 Score=21.28 Aligned_cols=87 Identities=17% Similarity=0.237 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCC-cccHHHHHHHHhhcccc-----chHHHHHHHhhhcCCCCccccHHHHHHHHHhhC---
Q 048069 11 NEVEALYDLFKKLSSSIIDDG-LIHKEEFQLALLRNSSK-----QNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFH--- 81 (213)
Q Consensus 11 ~~i~~l~~~F~~~d~~~~~~g-~is~~ef~~~l~~~~~~-----~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~--- 81 (213)
..+++-+..|..+.... .+| .|+-.+|.+.+...... ....+...|.-+--.+-+.++|++|..++..+.
T Consensus 12 a~~~~~f~~Fa~fGd~~-asg~em~gkn~~KlcKdc~V~DgK~vT~tdt~i~fsKvkg~~~~~~tf~~fkkal~ela~~R 90 (180)
T KOG4070|consen 12 AGLEESFRAFAKFGDSK-ASGTEMNGKNWDKLCKDCKVIDGKSVTGTDTDIVFSKVKGKKARTITFEEFKKALEELATKR 90 (180)
T ss_pred hhHHHHHHHHHHcCCcc-ccccccccccHHHHHhhcCcccCCcccccccceeeeeccccccccccHHHHHHHHHHHHHhh
Confidence 34566666676664221 233 57777777766443322 222345566666656667899999987776654
Q ss_pred -CCCchHHHHHHHhhhhc
Q 048069 82 -PSAPEAEKITFAFRLYD 98 (213)
Q Consensus 82 -~~~~~~~~~~~~F~~fD 98 (213)
+..+.++.+..+.+++.
T Consensus 91 ~k~Ks~ee~l~~I~~lla 108 (180)
T KOG4070|consen 91 FKGKSKEEALDAICQLLA 108 (180)
T ss_pred hcCCCHHHHHHHHHHHHh
Confidence 23566777777777764
No 192
>cd07177 terB_like tellurium resistance terB-like protein. This family consists of tellurium resistance terB proteins, N-terminal domain of heat shock DnaJ-like proteins, N-terminal domain of Mo-dependent nitrogenase-like proteins, C-terminal domain of ABC transporter ATP-binding proteins, C-terminal domain of serine/threonine protein kinase, and many hypothetical bacterial proteins. The function of this family is unknown.
Probab=22.81 E-value=1.5e+02 Score=19.90 Aligned_cols=79 Identities=11% Similarity=0.085 Sum_probs=38.8
Q ss_pred CCCcccHHHHHHHHhh---ccccchHHHHHHHhhhcCCCCccccHHHHHHHHHhhCCCCchHHHHHHHhhhhcCCCCCcc
Q 048069 29 DDGLIHKEEFQLALLR---NSSKQNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFHPSAPEAEKITFAFRLYDLRGTGYI 105 (213)
Q Consensus 29 ~~g~is~~ef~~~l~~---~~~~~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~~~~~~~~~~~F~~fD~d~~g~I 105 (213)
.||.++..|...+... ...-.......+...+........+...+................+..++... ..||.+
T Consensus 12 aDG~i~~~E~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~~~~~ia--~aDG~~ 89 (104)
T cd07177 12 ADGRVDEEEIAAIEALLRRLPLLDAEERAELIALLEEPLAEAGDLAALAALLKELPDAELREALLAALWEVA--LADGEL 89 (104)
T ss_pred hcCCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHhCCHHHHHHHHHHHHHHH--HhccCC
Confidence 4788888887744322 11101222233333333211102244555555544442223444555556665 456889
Q ss_pred cHHH
Q 048069 106 AREE 109 (213)
Q Consensus 106 s~~e 109 (213)
+..|
T Consensus 90 ~~~E 93 (104)
T cd07177 90 DPEE 93 (104)
T ss_pred CHHH
Confidence 9888
No 193
>PF09373 PMBR: Pseudomurein-binding repeat; InterPro: IPR018975 Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) is a methanogenic Gram-positive microorganism with a cell wall consisting of pseudomurein. This repeat specifically binds to pseudomurein. This repeat is found at the N terminus of PeiW and PeiP which are pseudomurein binding phage proteins.
Probab=22.74 E-value=1.2e+02 Score=16.65 Aligned_cols=16 Identities=25% Similarity=0.526 Sum_probs=11.5
Q ss_pred CCCcccHHHHHHHhhc
Q 048069 101 GTGYIAREELCNICKS 116 (213)
Q Consensus 101 ~~g~Is~~e~~~~~~~ 116 (213)
+.|.|+.+++..++.+
T Consensus 1 ~~~~i~~~~~~d~a~r 16 (33)
T PF09373_consen 1 SSGTISKEEYLDMASR 16 (33)
T ss_pred CCceecHHHHHHHHHH
Confidence 3688999996666555
No 194
>TIGR00014 arsC arsenate reductase (glutaredoxin). composed of two polypeptides, the products of the arsA and arsB genes. The pump alone produces resistance to arsenite and antimonite. This protein, ArsC, catalyzes the reduction of arsenate to arsenite, and thus extends resistance to include arsenate.
Probab=22.68 E-value=1.3e+02 Score=21.63 Aligned_cols=30 Identities=13% Similarity=0.182 Sum_probs=22.2
Q ss_pred HHHHhCCCCCCcccHHHHHHHHhhChhHHhh
Q 048069 159 TMMEADIKGDGKIDLEEWTEFAGRNPTILKS 189 (213)
Q Consensus 159 ~f~~~D~~~dg~It~~ef~~~l~~~~~~~~~ 189 (213)
.++..+.+. ..++-++++..|..+|.+++.
T Consensus 63 ~~~~l~~~~-~~ls~~e~i~~l~~~P~LikR 92 (114)
T TIGR00014 63 LYKELGLSD-PNLSDQELLDAMVAHPILLER 92 (114)
T ss_pred HHHHcCCCc-cCCCHHHHHHHHHHCcCcccC
Confidence 345544433 358889999999999999874
No 195
>PF04282 DUF438: Family of unknown function (DUF438); InterPro: IPR007380 This is a a group of uncharacterised proteins.
Probab=22.23 E-value=2.3e+02 Score=18.88 Aligned_cols=20 Identities=20% Similarity=0.504 Sum_probs=14.7
Q ss_pred CCcccHHHHHHHHhhChhHHh
Q 048069 168 DGKIDLEEWTEFAGRNPTILK 188 (213)
Q Consensus 168 dg~It~~ef~~~l~~~~~~~~ 188 (213)
+| ++.+|-.+.|--+-.+++
T Consensus 44 eG-~~~eeiq~LCdvH~~lf~ 63 (71)
T PF04282_consen 44 EG-MPVEEIQKLCDVHAALFK 63 (71)
T ss_pred cC-CCHHHHHHHhHHHHHHHH
Confidence 45 888888888877766654
No 196
>KOG1265 consensus Phospholipase C [Lipid transport and metabolism]
Probab=21.94 E-value=5.6e+02 Score=25.92 Aligned_cols=71 Identities=13% Similarity=0.194 Sum_probs=54.7
Q ss_pred chHHHHHHHhhhcCCCCccccHHHHHHHHHhhCCC---------CchHHHHHHHhhhhcCCC----CCcccHHHHHHHhh
Q 048069 49 QNLFADRIFDLFDVKRNGVIEFGEFVRSLSIFHPS---------APEAEKITFAFRLYDLRG----TGYIAREELCNICK 115 (213)
Q Consensus 49 ~~~~~~~lf~~~d~~~~g~I~f~ef~~~~~~~~~~---------~~~~~~~~~~F~~fD~d~----~g~Is~~e~~~~~~ 115 (213)
+.+.++++|..+..++..+++.+++..++...++. .....++..+.+.|..++ .|.|+.+-|+..+.
T Consensus 219 pR~eie~iF~ki~~~~kpylT~~ql~dfln~~QrDpRLNeilfp~~~~~r~~~liekyEp~~~~a~~gqms~dgf~ryl~ 298 (1189)
T KOG1265|consen 219 PRPEIEEIFRKISGKKKPYLTKEQLVDFLNKKQRDPRLNEILFPPADPRRIQSLIEKYEPNSDNAEKGQMSTDGFVRYLM 298 (1189)
T ss_pred CchhHHHHHHHhccCCCccccHHHHHHHHhhhccCcchhhhhcCCCCHHHHHHHHHHcCCchhhhhccccchhhhHHHhh
Confidence 34567999999998888899999999999877642 123567888888887654 68899999777776
Q ss_pred ccCc
Q 048069 116 SDTD 119 (213)
Q Consensus 116 ~~~~ 119 (213)
++.+
T Consensus 299 gdEn 302 (1189)
T KOG1265|consen 299 GDEN 302 (1189)
T ss_pred CCcc
Confidence 6444
No 197
>PRK12461 UDP-N-acetylglucosamine acyltransferase; Provisional
Probab=21.86 E-value=3e+02 Score=22.88 Aligned_cols=57 Identities=11% Similarity=0.135 Sum_probs=33.6
Q ss_pred ccCCCCHHHHHHHHHHHHhhcCCCCCCCcccHHHHHHHHhhccccchHHHHHHHhhhcCCCCc
Q 048069 4 DFWAVTVNEVEALYDLFKKLSSSIIDDGLIHKEEFQLALLRNSSKQNLFADRIFDLFDVKRNG 66 (213)
Q Consensus 4 ~~~~~s~~~i~~l~~~F~~~d~~~~~~g~is~~ef~~~l~~~~~~~~~~~~~lf~~~d~~~~g 66 (213)
+...|++++++.+++.|+.+= ...++.++-.+.+... ....+.++.+.+.+...+.|
T Consensus 196 ~r~g~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~f~~~s~rg 252 (255)
T PRK12461 196 RRRGFSSRAIRALKRAYKIIY-----RSGLSVQQAVAELELQ-QFESPEVEELIDFIKASKRG 252 (255)
T ss_pred hhcCCCHHHHHHHHHHHHHHH-----hcCCCHHHHHHHHHHh-ccCCHHHHHHHHHHHccCCC
Confidence 345789999999999998873 2334555544444322 23445556666666443333
No 198
>cd05833 Ribosomal_P2 Ribosomal protein P2. This subfamily represents the eukaryotic large ribosomal protein P2. Eukaryotic P1 and P2 are functionally equivalent to the bacterial protein L7/L12, but are not homologous to L7/L12. P2 is located in the L12 stalk, with proteins P1, P0, L11, and 28S rRNA. P1 and P2 are the only proteins in the ribosome to occur as multimers, always appearing as sets of heterodimers. Recent data indicate that eukaryotes have four copies (two heterodimers), while most archaeal species contain six copies of L12p (three homodimers). Bacteria may have four or six copies of L7/L12 (two or three homodimers) depending on the species. Experiments using S. cerevisiae P1 and P2 indicate that P1 proteins are positioned more internally with limited reactivity in the C-terminal domains, while P2 proteins seem to be more externally located and are more likely to interact with other cellular components. In lower eukaryotes, P1 and P2 are further subdivided into P1A, P1B, P2
Probab=21.32 E-value=2.7e+02 Score=20.15 Aligned_cols=40 Identities=18% Similarity=0.338 Sum_probs=28.3
Q ss_pred HHHhhhhcCCCCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHH
Q 048069 91 TFAFRLYDLRGTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIV 156 (213)
Q Consensus 91 ~~~F~~fD~d~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 156 (213)
-.+|-+.-..++..+|.++ ++.++... |....+..+..++
T Consensus 4 vaAylL~~l~g~~~pTa~d----------------------I~~IL~Aa----GveVe~~~~~lf~ 43 (109)
T cd05833 4 VAAYLLAVLGGNASPSAAD----------------------VKKILGSV----GVEVDDEKLNKVI 43 (109)
T ss_pred HHHHHHHHHcCCCCCCHHH----------------------HHHHHHHc----CCCccHHHHHHHH
Confidence 3456666667888999999 77777666 6777777765555
No 199
>PRK03002 prsA peptidylprolyl isomerase; Reviewed
Probab=21.05 E-value=5e+02 Score=21.80 Aligned_cols=73 Identities=19% Similarity=0.120 Sum_probs=39.9
Q ss_pred CCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHHHHHHHHhCC------CCCCcccHH
Q 048069 101 GTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIVDKTMMEADI------KGDGKIDLE 174 (213)
Q Consensus 101 ~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~D~------~~dg~It~~ 174 (213)
+++.||..||..-+.. ...-.+|.+++..-....+..++++++++.+..+-..+.. ...|.-+++
T Consensus 34 ng~~It~~~~~~~l~~---------~~g~~~l~~li~~~~~~~~i~vsd~evd~~i~~i~~~~g~~f~~~L~~~G~~~~~ 104 (285)
T PRK03002 34 TDSTITKSDFEKQLKD---------RYGKDMLYEMMAQDVITKKYKVSDDDVDKEVQKAKSQYGDQFKNVLKNNGLKDEA 104 (285)
T ss_pred CCcccCHHHHHHHHHH---------HHHHHHHHHHHHHHHHHcCCCcCHHHHHHHHHHHHHHhhHHHHHHHHHcCCCCHH
Confidence 4567777776654432 1222334454443333446778888888777766554320 123433567
Q ss_pred HHHHHHhh
Q 048069 175 EWTEFAGR 182 (213)
Q Consensus 175 ef~~~l~~ 182 (213)
+|..-++.
T Consensus 105 ~~r~~ir~ 112 (285)
T PRK03002 105 DFKNQIKF 112 (285)
T ss_pred HHHHHHHH
Confidence 77666554
No 200
>PF03979 Sigma70_r1_1: Sigma-70 factor, region 1.1; InterPro: IPR007127 The bacterial core RNA polymerase complex, which consists of five subunits, is sufficient for transcription elongation and termination but is unable to initiate transcription. Transcription initiation from promoter elements requires a sixth, dissociable subunit called a sigma factor, which reversibly associates with the core RNA polymerase complex to form a holoenzyme []. RNA polymerase recruits alternative sigma factors as a means of switching on specific regulons. Most bacteria express a multiplicity of sigma factors. Two of these factors, sigma-70 (gene rpoD), generally known as the major or primary sigma factor, and sigma-54 (gene rpoN or ntrA) direct the transcription of a wide variety of genes. The other sigma factors, known as alternative sigma factors, are required for the transcription of specific subsets of genes. With regard to sequence similarity, sigma factors can be grouped into two classes, the sigma-54 and sigma-70 families. Sequence alignments of the sigma70 family members reveal four conserved regions that can be further divided into subregions eg. sub-region 2.2, which may be involved in the binding of the sigma factor to the core RNA polymerase; and sub-region 4.2, which seems to harbor a DNA-binding 'helix-turn-helix' motif involved in binding the conserved -35 region of promoters recognised by the major sigma factors [, ]. This entry represents Region 1.1 which modulates DNA binding by region 2 and 4 when sigma is unbound by the core RNA polymerase [, ]. Region 1.1 is also involved in promoter binding.; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2K6X_A.
Probab=20.33 E-value=1.2e+02 Score=20.35 Aligned_cols=28 Identities=21% Similarity=0.478 Sum_probs=16.1
Q ss_pred CCCcccHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHHhhhccccCChHHHHHHH
Q 048069 101 GTGYIAREELCNICKSDTDSLCCKYVLLLWKLKEMVVSLLSESELALSDDVVESIV 156 (213)
Q Consensus 101 ~~g~Is~~e~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 156 (213)
..|+||.++ +..++. ...++...++.++
T Consensus 18 ~~G~lT~~e----------------------I~~~L~------~~~~~~e~id~i~ 45 (82)
T PF03979_consen 18 KKGYLTYDE----------------------INDALP------EDDLDPEQIDEIY 45 (82)
T ss_dssp HHSS-BHHH----------------------HHHH-S-------S---HHHHHHHH
T ss_pred hcCcCCHHH----------------------HHHHcC------ccCCCHHHHHHHH
Confidence 469999999 777774 2346677776665
No 201
>PF04157 EAP30: EAP30/Vps36 family; InterPro: IPR007286 EAP30 is a subunit of the ELL complex. The ELL is an 80kDa RNA polymerase II transcription factor. ELL interacts with three other proteins to form the complex known as ELL complex. The ELL complex is capable of increasing that catalytic rate of transcription elongation, but is unable to repress initiation of transcription by RNA polymerase II as is the case of ELL. EAP30 is thought to lead to the derepression of ELL's transcriptional inhibitory activity. ; PDB: 2ZME_A 3CUQ_A 1W7P_D 1U5T_B.
Probab=20.12 E-value=3.7e+02 Score=21.72 Aligned_cols=20 Identities=15% Similarity=0.150 Sum_probs=10.4
Q ss_pred HHHHhhhhcCCCCCcccHHH
Q 048069 90 ITFAFRLYDLRGTGYIAREE 109 (213)
Q Consensus 90 ~~~~F~~fD~d~~g~Is~~e 109 (213)
...+.........|++|..+
T Consensus 176 ~~~il~~~~~~~~g~vt~~~ 195 (223)
T PF04157_consen 176 QSRILELAEEENGGGVTASE 195 (223)
T ss_dssp HHHHHHHH--TTTSEEEHHH
T ss_pred HHHHHHHHHhhcCCCCCHHH
Confidence 34444444235567777777
Done!