Query 048070
Match_columns 87
No_of_seqs 102 out of 1082
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 10:05:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048070.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048070hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3l5l_A Xenobiotic reductase A; 99.7 1.3E-18 4.4E-23 130.1 6.0 68 1-68 19-87 (363)
2 3hgj_A Chromate reductase; TIM 99.7 1.3E-18 4.5E-23 129.4 5.9 68 1-68 19-88 (349)
3 3kru_A NADH:flavin oxidoreduct 99.7 2.2E-18 7.6E-23 128.6 6.4 68 1-68 19-88 (343)
4 3l5a_A NADH/flavin oxidoreduct 99.7 2E-18 7E-23 131.7 6.0 68 1-68 43-111 (419)
5 3gr7_A NADPH dehydrogenase; fl 99.7 2.1E-18 7.3E-23 128.2 5.2 68 1-68 20-90 (340)
6 4ab4_A Xenobiotic reductase B; 99.7 1.8E-17 6.1E-22 124.6 6.7 67 1-68 19-86 (362)
7 3gka_A N-ethylmaleimide reduct 99.7 1.9E-17 6.4E-22 124.4 6.6 67 1-68 27-94 (361)
8 3tjl_A NADPH dehydrogenase; OL 99.7 1.7E-17 5.9E-22 126.6 6.4 68 1-68 29-99 (407)
9 3aty_A Tcoye, prostaglandin F2 99.7 3.1E-17 1.1E-21 123.6 7.4 67 1-68 22-91 (379)
10 4a3u_A NCR, NADH\:flavin oxido 99.7 6.1E-17 2.1E-21 120.9 7.1 67 1-68 19-86 (358)
11 4gbu_A NADPH dehydrogenase 1; 99.7 3.9E-17 1.3E-21 123.5 5.9 68 1-68 32-103 (400)
12 2hsa_B 12-oxophytodienoate red 99.7 7.3E-17 2.5E-21 122.4 7.0 67 1-67 33-99 (402)
13 1icp_A OPR1, 12-oxophytodienoa 99.7 6.4E-17 2.2E-21 121.7 6.1 67 1-67 31-97 (376)
14 1z41_A YQJM, probable NADH-dep 99.6 2.6E-16 8.7E-21 116.3 5.9 67 1-67 20-89 (338)
15 1vyr_A Pentaerythritol tetrani 99.6 7.3E-16 2.5E-20 115.4 7.6 66 1-67 20-87 (364)
16 2r14_A Morphinone reductase; H 99.6 7.9E-16 2.7E-20 115.8 6.2 66 1-67 26-91 (377)
17 2gou_A Oxidoreductase, FMN-bin 99.6 1.8E-15 6.1E-20 113.3 6.5 66 1-67 20-87 (365)
18 1ps9_A 2,4-dienoyl-COA reducta 99.5 3.3E-14 1.1E-18 111.8 5.3 67 1-67 20-87 (671)
19 1o94_A Tmadh, trimethylamine d 99.2 8.2E-12 2.8E-16 99.4 5.1 65 1-67 24-90 (729)
20 3k30_A Histamine dehydrogenase 99.1 7.6E-11 2.6E-15 93.0 5.1 65 1-68 29-96 (690)
21 1vhn_A Putative flavin oxidore 93.9 0.021 7.2E-07 41.2 1.7 34 1-43 7-41 (318)
22 3b0p_A TRNA-dihydrouridine syn 93.5 0.028 9.7E-07 41.3 1.7 35 1-42 6-40 (350)
23 2nuw_A 2-keto-3-deoxygluconate 83.9 2.4 8.2E-05 30.1 5.6 62 2-72 3-67 (288)
24 1w3i_A EDA, 2-keto-3-deoxy glu 82.8 3.1 0.00011 29.6 5.8 62 2-72 3-67 (293)
25 1f76_A Dihydroorotate dehydrog 78.4 0.42 1.4E-05 34.3 0.0 36 22-57 69-106 (336)
26 3cpr_A Dihydrodipicolinate syn 73.4 6.3 0.00021 28.1 5.1 59 2-69 20-81 (304)
27 1f6k_A N-acetylneuraminate lya 73.2 6.4 0.00022 27.8 5.1 59 2-69 7-69 (293)
28 2r91_A 2-keto-3-deoxy-(6-phosp 72.7 4.4 0.00015 28.6 4.1 61 2-72 3-66 (286)
29 3s5o_A 4-hydroxy-2-oxoglutarat 72.3 12 0.00041 26.6 6.4 59 2-69 18-79 (307)
30 2r8w_A AGR_C_1641P; APC7498, d 70.9 7.2 0.00025 28.3 5.0 59 2-69 38-99 (332)
31 2ojp_A DHDPS, dihydrodipicolin 70.4 5.3 0.00018 28.3 4.1 59 2-69 5-66 (292)
32 2wkj_A N-acetylneuraminate lya 69.2 7.5 0.00026 27.7 4.7 59 2-69 15-76 (303)
33 3b4u_A Dihydrodipicolinate syn 68.5 8.3 0.00028 27.3 4.8 60 2-70 7-69 (294)
34 1xky_A Dihydrodipicolinate syn 67.9 6.4 0.00022 28.0 4.1 59 2-69 16-77 (301)
35 3dz1_A Dihydrodipicolinate syn 67.9 10 0.00035 27.1 5.2 60 2-70 12-74 (313)
36 3fkr_A L-2-keto-3-deoxyarabona 67.6 6.8 0.00023 28.0 4.2 59 2-69 12-73 (309)
37 3a5f_A Dihydrodipicolinate syn 65.8 6.9 0.00024 27.6 3.9 57 2-68 6-65 (291)
38 3l21_A DHDPS, dihydrodipicolin 64.4 11 0.00036 27.0 4.7 59 2-69 19-80 (304)
39 2ehh_A DHDPS, dihydrodipicolin 64.3 7.9 0.00027 27.4 4.0 58 2-69 5-65 (294)
40 3qfe_A Putative dihydrodipicol 62.2 7.9 0.00027 27.9 3.7 59 2-69 14-76 (318)
41 3e96_A Dihydrodipicolinate syn 60.9 9.1 0.00031 27.4 3.8 59 2-69 15-77 (316)
42 4dpp_A DHDPS 2, dihydrodipicol 60.6 13 0.00045 27.6 4.7 59 2-69 63-124 (360)
43 2v9d_A YAGE; dihydrodipicolini 60.2 8.7 0.0003 28.0 3.6 59 2-69 35-96 (343)
44 3m5v_A DHDPS, dihydrodipicolin 59.6 6.4 0.00022 28.0 2.8 59 2-70 12-73 (301)
45 3qze_A DHDPS, dihydrodipicolin 59.5 11 0.00038 27.0 4.1 59 2-69 27-88 (314)
46 2yxg_A DHDPS, dihydrodipicolin 59.3 9.6 0.00033 26.9 3.7 58 2-69 5-65 (289)
47 3civ_A Endo-beta-1,4-mannanase 57.6 7.6 0.00026 28.3 3.0 25 12-36 90-114 (343)
48 3h5d_A DHDPS, dihydrodipicolin 56.6 13 0.00046 26.6 4.1 59 2-69 11-72 (311)
49 3tak_A DHDPS, dihydrodipicolin 56.4 22 0.00076 25.0 5.2 59 2-69 5-66 (291)
50 3na8_A Putative dihydrodipicol 54.9 9.5 0.00032 27.4 3.1 59 2-69 28-89 (315)
51 3d0c_A Dihydrodipicolinate syn 54.6 11 0.00036 27.1 3.3 59 2-69 15-77 (314)
52 3flu_A DHDPS, dihydrodipicolin 54.5 25 0.00085 24.8 5.2 58 2-68 11-71 (297)
53 3eb2_A Putative dihydrodipicol 53.5 6.7 0.00023 27.9 2.0 59 2-69 8-69 (300)
54 2pcq_A Putative dihydrodipicol 52.8 11 0.00036 26.6 3.0 68 1-78 1-70 (283)
55 2hmc_A AGR_L_411P, dihydrodipi 52.3 50 0.0017 24.0 6.6 68 2-78 30-100 (344)
56 2rfg_A Dihydrodipicolinate syn 49.4 7.1 0.00024 27.8 1.6 58 2-69 5-65 (297)
57 3si9_A DHDPS, dihydrodipicolin 48.0 28 0.00096 24.9 4.6 58 2-68 26-86 (315)
58 2vc6_A MOSA, dihydrodipicolina 47.2 6.4 0.00022 27.8 1.1 58 2-69 5-65 (292)
59 1o5k_A DHDPS, dihydrodipicolin 45.0 15 0.00052 26.1 2.8 58 2-69 17-77 (306)
60 2z6i_A Trans-2-enoyl-ACP reduc 34.8 33 0.0011 24.3 3.3 58 1-77 15-72 (332)
61 3daq_A DHDPS, dihydrodipicolin 28.8 41 0.0014 23.6 2.8 58 2-69 7-67 (292)
62 1jub_A Dihydroorotate dehydrog 22.0 65 0.0022 22.3 2.8 22 22-43 27-49 (311)
63 1ep3_A Dihydroorotate dehydrog 22.0 63 0.0022 22.1 2.7 15 30-44 41-55 (311)
64 3bw2_A 2-nitropropane dioxygen 21.9 1.1E+02 0.0039 21.8 4.2 20 58-77 52-71 (369)
No 1
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=99.74 E-value=1.3e-18 Score=130.06 Aligned_cols=68 Identities=15% Similarity=0.137 Sum_probs=64.5
Q ss_pred CEEccCCCCcCCCCCCCHHHHHHHHHhccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhh
Q 048070 1 IVLAPLTRVRSYNNIPRPHSILYYSQRTIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFA 68 (87)
Q Consensus 1 IVmAPM~~~~~~dG~~t~~~i~yY~~RAkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~ 68 (87)
||||||++++++||.+|+++++||++||+| +||||+|++.|++.++.+++++++|+|+++++||+|-.
T Consensus 19 iv~apm~~~~~~~g~~~~~~~~~y~~rA~gG~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~~~~~~~ 87 (363)
T 3l5l_A 19 IAIPPMCQYMAEDGMINDWHHVHLAGLARGGAGLLVVEATAVAPEGRITPGCAGIWSDAHAQAFVPVVQ 87 (363)
T ss_dssp EEECCCCCCCCBTTBCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTCCBCSSHHHHHHHHHHHH
T ss_pred eEECCCCCCcCCCCCCCHHHHHHHHHHHccCceEEEecceeeCccccCCCCcceecCHHHHHHHHHHHH
Confidence 689999998778999999999999999995 89999999999999999999999999999999999875
No 2
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=99.74 E-value=1.3e-18 Score=129.36 Aligned_cols=68 Identities=16% Similarity=0.196 Sum_probs=64.3
Q ss_pred CEEccCCCCcCC-CCCCCHHHHHHHHHhccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhh
Q 048070 1 IVLAPLTRVRSY-NNIPRPHSILYYSQRTIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFA 68 (87)
Q Consensus 1 IVmAPM~~~~~~-dG~~t~~~i~yY~~RAkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~ 68 (87)
||||||++++++ ||.+|+++++||++||+| +||||+|++.|++.++.+++++++|+|+|+++||+|-.
T Consensus 19 iv~apm~~~~~~~~g~~~~~~~~~y~~rA~gg~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~~~~~~~ 88 (349)
T 3hgj_A 19 LAMSPMCQYSATLEGEVTDWHLLHYPTRALGGVGLILVEATAVEPLGRISPYDLGIWSEDHLPGLKELAR 88 (349)
T ss_dssp EEECCCCCCCSCTTCCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSGGGHHHHHHHHH
T ss_pred eEECCcCcCCcCCCCCCCHHHHHHHHHHhcCCceEEEecceeecccccCCCCcCccCcHHHHHHHHHHHH
Confidence 689999998885 999999999999999995 89999999999999999999999999999999999865
No 3
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=99.74 E-value=2.2e-18 Score=128.59 Aligned_cols=68 Identities=19% Similarity=0.318 Sum_probs=64.5
Q ss_pred CEEccCCCCcCC-CCCCCHHHHHHHHHhccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhh
Q 048070 1 IVLAPLTRVRSY-NNIPRPHSILYYSQRTIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFA 68 (87)
Q Consensus 1 IVmAPM~~~~~~-dG~~t~~~i~yY~~RAkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~ 68 (87)
||||||++++++ ||.+|+++++||++||+| +||||+|++.|++.++.+++++++|+|+++++||+|-.
T Consensus 19 iv~apm~~~~~~~~g~~t~~~~~yy~~rA~gG~Gliite~~~V~~~g~~~~~~~gi~~d~~i~~~~~~~~ 88 (343)
T 3kru_A 19 IMMSPMCMYSASTDGMPNDWHIVHYATRAIGGVGLIMQEATAVESRGRITDHDLGIWNDEQVKELKKIVD 88 (343)
T ss_dssp EEECCCCCCCSCTTCCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSHHHHHHHHHHHH
T ss_pred ecccchhheecccCCCCCceeeeeeehhhccceeeeeehhhhhhhcCccccccccccCHHHHHHHHHHHH
Confidence 689999999885 999999999999999995 89999999999999999999999999999999999865
No 4
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=99.73 E-value=2e-18 Score=131.67 Aligned_cols=68 Identities=18% Similarity=0.119 Sum_probs=64.7
Q ss_pred CEEccCCCCcC-CCCCCCHHHHHHHHHhccCCcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhh
Q 048070 1 IVLAPLTRVRS-YNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFA 68 (87)
Q Consensus 1 IVmAPM~~~~~-~dG~~t~~~i~yY~~RAkGaGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~ 68 (87)
||||||+++++ +||.+|+++++||++||+|+||||+|++.|++.++.+++++++|+|+++++||+|-.
T Consensus 43 iv~aPm~~~~a~~dg~~t~~~~~yy~~rA~G~GLiIte~~~V~~~g~~~~~~~gi~~d~~i~~~k~l~~ 111 (419)
T 3l5a_A 43 FVLSPMTVNASTKEGYITKADLAYAARRSNSAGMQVTGAAYIEPYGKLFEYGFNIDHDACIPGLTNMAS 111 (419)
T ss_dssp EEECCCCCCCSCTTCCCCHHHHHHHHHTTTSCSEEEEEEEESSGGGCCSTTCEECSSGGGHHHHHHHHH
T ss_pred eEeCCCCCCccCCCCCCCHHHHHHHHHHhcCCcEEEecceEeCcccccCCCccccccHHHHHHHHHHHH
Confidence 68999999988 599999999999999999899999999999999999999999999999999999865
No 5
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=99.73 E-value=2.1e-18 Score=128.17 Aligned_cols=68 Identities=21% Similarity=0.272 Sum_probs=64.2
Q ss_pred CEEccCCCCcCC--CCCCCHHHHHHHHHhccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhh
Q 048070 1 IVLAPLTRVRSY--NNIPRPHSILYYSQRTIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFA 68 (87)
Q Consensus 1 IVmAPM~~~~~~--dG~~t~~~i~yY~~RAkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~ 68 (87)
||||||+++++. ||.+|+++++||++||+| +||||+|++.|++.++.+++++++|+|+++++||+|-.
T Consensus 20 iv~apm~~~~~~~~~g~~~~~~~~~y~~rA~gG~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~~~~~~~ 90 (340)
T 3gr7_A 20 IVMSPMCMYSCDTKDGAVRTWHKIHYPARAVGQVGLIIVEATGVTPQGRISERDLGIWSDDHIAGLRELVG 90 (340)
T ss_dssp EEECCCCCCCCTTSSSCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSEECSSTTHHHHHHHHHH
T ss_pred eEECCcCCCcccCCCCCCCHHHHHHHHHHhcCCceEEEEcceEecccccCCCCCcccCCHHHHHHHHHHHH
Confidence 689999998874 999999999999999996 89999999999999999999999999999999999865
No 6
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=99.70 E-value=1.8e-17 Score=124.57 Aligned_cols=67 Identities=31% Similarity=0.434 Sum_probs=63.8
Q ss_pred CEEccCCCCcC-CCCCCCHHHHHHHHHhccCCcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhh
Q 048070 1 IVLAPLTRVRS-YNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFA 68 (87)
Q Consensus 1 IVmAPM~~~~~-~dG~~t~~~i~yY~~RAkGaGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~ 68 (87)
||||||+++++ +||.+|+++++||++||+ +||||+|++.|++.++.+++++++|+|+++++||+|-.
T Consensus 19 iv~aPm~~~~a~~~g~pt~~~~~yY~~rA~-~GLIite~~~V~~~g~~~~~~~gi~~d~~i~~~k~l~~ 86 (362)
T 4ab4_A 19 IIMAPLTRCRADEGRVPNALMAEYYVQRAS-AGLILSEATSVSPMGVGYPDTPGIWNDEQVRGWNNVTK 86 (362)
T ss_dssp EEECCCCCCCCBTTTBCCHHHHHHHHHTTT-SSEEEEEEEESSGGGCCSTTCCBCSSHHHHHHHHHHHH
T ss_pred cEECCccCCccCCCCCCCHHHHHHHHHHHh-hCEEeeeeeEecccccCCCCCCCcCCHHHHHHHHHHHH
Confidence 68999999988 599999999999999999 89999999999999999999999999999999999865
No 7
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=99.70 E-value=1.9e-17 Score=124.44 Aligned_cols=67 Identities=30% Similarity=0.428 Sum_probs=63.8
Q ss_pred CEEccCCCCcC-CCCCCCHHHHHHHHHhccCCcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhh
Q 048070 1 IVLAPLTRVRS-YNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFA 68 (87)
Q Consensus 1 IVmAPM~~~~~-~dG~~t~~~i~yY~~RAkGaGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~ 68 (87)
||||||+++++ +||.+|+++++||++||+ +||||+|++.|++.++.+++++++|+|+++++||+|-.
T Consensus 27 iv~aPm~~~~a~~~g~pt~~~~~yY~~rA~-~GLIite~~~V~~~g~~~~~~~gi~~d~~i~~~k~l~~ 94 (361)
T 3gka_A 27 IIMAPLTRARAGDTRTPNALMARYYAERAS-AGLIISEATSVTPQGVGYASTPGIWSPEQVDGWRLVTD 94 (361)
T ss_dssp EEECCCCCCCSTTTTCCCHHHHHHHHTTTT-SSEEEEEEEESSGGGCCSTTCCBSSSHHHHHHHHHHHH
T ss_pred cEECCCCCCccCCCCCCCHHHHHHHHHHHh-CCEEEEcceeecccccCCCCCCccCCHHHHHHHHHHHH
Confidence 68999999988 599999999999999999 89999999999999999999999999999999999865
No 8
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=99.70 E-value=1.7e-17 Score=126.59 Aligned_cols=68 Identities=29% Similarity=0.361 Sum_probs=64.0
Q ss_pred CEEccCCCCcC-CCCCCCHHHHHHHHHhccC-CcEEEecccccCCCCCCCCC-CccCCCHHHHhhHHHhhh
Q 048070 1 IVLAPLTRVRS-YNNIPRPHSILYYSQRTIN-GGFLIAEATGVSDTAQGLSI-TRNSFLNARLWYLYWVFA 68 (87)
Q Consensus 1 IVmAPM~~~~~-~dG~~t~~~i~yY~~RAkG-aGLIIte~~~V~~~g~~~~~-~~~i~~d~~i~~Lk~~~~ 68 (87)
||||||+++++ +||.||+++++||++||+| +||||+|++.|++.++.+++ ++++|+|+++++||+|..
T Consensus 29 iv~aPm~~~~a~~~g~pt~~~~~yY~~rA~gG~GLIIte~~~V~~~g~~~~~~~~gi~~d~~i~~~k~l~~ 99 (407)
T 3tjl_A 29 IVYPPTTRFRALEDHTPSDLQLQYYGDRSTFPGTLLITEATFVSPQASGYEGAAPGIWTDKHAKAWKVITD 99 (407)
T ss_dssp EEBCCCCCCBSCTTSCCBHHHHHHHHHTCCSTTCEEEEEEEESSGGGCCCSSBCCBCSSHHHHHHHHHHHH
T ss_pred cEECCCCCCccCCCCCCCHHHHHHHHHHHcCCceEEEEcceEECCccCCCCCcCcccCCHHHHHHHHHHHH
Confidence 68999999887 5899999999999999995 89999999999999999999 999999999999999865
No 9
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=99.69 E-value=3.1e-17 Score=123.65 Aligned_cols=67 Identities=30% Similarity=0.508 Sum_probs=63.3
Q ss_pred CEEccCCCCcCC--CCCCC-HHHHHHHHHhccCCcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhh
Q 048070 1 IVLAPLTRVRSY--NNIPR-PHSILYYSQRTINGGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFA 68 (87)
Q Consensus 1 IVmAPM~~~~~~--dG~~t-~~~i~yY~~RAkGaGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~ 68 (87)
||||||+++++. ||.+| +++++||++|| |+||||+|++.|++.++.+++++++|+|+|+++||+|-.
T Consensus 22 iv~apm~~~~a~~~~g~pt~~~~~~yY~~rA-~~GLIite~~~v~~~g~~~~~~~gi~~d~~i~~~k~~~~ 91 (379)
T 3aty_A 22 IIMAPLTRCQATEDDHVPRTESMLKYYEDRA-SAGLIIAEATMVQPNYTGFLTEPGIYSDAQIEEWRKIVD 91 (379)
T ss_dssp EEECCCCCCCBCTTTCCBCHHHHHHHHHTTT-TSSEEEEEEEESSTTCCSSSSCCBSSSHHHHHHHHHHHH
T ss_pred cEECCcCCCcccCCCCccCHHHHHHHHHHHh-CCCeEEECceecccccccCCCCCCcCCHHHHHHHHHHHH
Confidence 689999999874 89999 99999999999 699999999999999999999999999999999999864
No 10
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=99.68 E-value=6.1e-17 Score=120.93 Aligned_cols=67 Identities=31% Similarity=0.469 Sum_probs=63.0
Q ss_pred CEEccCCCCcC-CCCCCCHHHHHHHHHhccCCcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhh
Q 048070 1 IVLAPLTRVRS-YNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFA 68 (87)
Q Consensus 1 IVmAPM~~~~~-~dG~~t~~~i~yY~~RAkGaGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~ 68 (87)
||||||+++++ +||.+|+++++||++||+ +||||+|++.|++.+..+++++++|+|+++++||+|-.
T Consensus 19 iv~apm~~~~a~~dg~~t~~~~~~y~~rA~-gGliite~~~V~~~g~~~~~~~gi~~d~~i~~~k~l~~ 86 (358)
T 4a3u_A 19 IWMAPLTRGRATRDHVPTEIMAEYYAQRAS-AGLIISEATGISQEGLGWPYAPGIWSDAQVEAWLPITQ 86 (358)
T ss_dssp EEECCCCCCCSCTTCCCCHHHHHHHHHTTT-SSSEEEEEEESSTTTCCSTTCCBCSSHHHHHHHHHHHH
T ss_pred eEEcccCCCccCCCCCCCHHHHHHHHHHcC-CCEEEEeeeEECccccCCCCCcccCchHhHHHHHHHHH
Confidence 68999999888 599999999999999998 48999999999999999999999999999999999864
No 11
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=99.67 E-value=3.9e-17 Score=123.47 Aligned_cols=68 Identities=25% Similarity=0.368 Sum_probs=61.9
Q ss_pred CEEccCCCCcC-CCCCCC--HHHHHHHHHhccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhh
Q 048070 1 IVLAPLTRVRS-YNNIPR--PHSILYYSQRTIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFA 68 (87)
Q Consensus 1 IVmAPM~~~~~-~dG~~t--~~~i~yY~~RAkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~ 68 (87)
||||||+++++ .||.++ |.+++||++||+| +||||+|++.|++.++.+++++++|+|+|+++||+|-.
T Consensus 32 iv~aPm~~~~a~~~g~v~~~d~~~~yy~~rA~GG~GLIite~~~V~~~g~~~~~~~gi~~d~~i~~~k~l~d 103 (400)
T 4gbu_A 32 AVIPPLTRMRALHPGNIPNRDWAVEYYTQRAQRPGTMIITEGAFISPQAGGYDNAPGVWSEEQMVEWTKIFN 103 (400)
T ss_dssp EEBCCCCCCCCBTTTTBCCTTTHHHHHHHHTCSTTCEEECSCEESSGGGCCCTTSCBSSSHHHHHHHHHHHH
T ss_pred CEeCCccCCcCCCCCCCCCHHHHHHHHHHHHcCCeEEEEEcCeEECccccCCCCCCccCCHHHHHHHHHHHH
Confidence 68999999988 577654 6799999999996 89999999999999999999999999999999999875
No 12
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=99.67 E-value=7.3e-17 Score=122.41 Aligned_cols=67 Identities=39% Similarity=0.582 Sum_probs=63.8
Q ss_pred CEEccCCCCcCCCCCCCHHHHHHHHHhccCCcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhh
Q 048070 1 IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVF 67 (87)
Q Consensus 1 IVmAPM~~~~~~dG~~t~~~i~yY~~RAkGaGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~ 67 (87)
||||||+++++++|.+|+++++||++||+|+||||+|.+.|++.+..+++++++|+|+++++||+|.
T Consensus 33 iv~aPm~~~~a~~g~pt~~~~~yy~~rA~G~GLIitE~~~v~~~g~~~~~~~gi~~d~~i~~~k~l~ 99 (402)
T 2hsa_B 33 VVLAPMTRCRALNNIPQAALGEYYEQRATAGGFLITEGTMISPTSAGFPHVPGIFTKEQVREWKKIV 99 (402)
T ss_dssp EEECCCCCCCSGGGCCCHHHHHHHHHHCCTTCEEECCCEESSTTCCCSTTCCBCSSHHHHHHHHHHH
T ss_pred eEECCCCCCcCCCCCCCHHHHHHHHHHhccCCEEEecceeeccccccCCCCcccCCHHHHHHHHHHH
Confidence 6899999998866799999999999999999999999999999999999999999999999999995
No 13
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=99.67 E-value=6.4e-17 Score=121.66 Aligned_cols=67 Identities=46% Similarity=0.665 Sum_probs=63.6
Q ss_pred CEEccCCCCcCCCCCCCHHHHHHHHHhccCCcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhh
Q 048070 1 IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVF 67 (87)
Q Consensus 1 IVmAPM~~~~~~dG~~t~~~i~yY~~RAkGaGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~ 67 (87)
||||||+++++.+|.+|+++++||++||+|+||||+|.+.|++.+..+++++++|+|+++++||+|.
T Consensus 31 iv~aPm~~~~a~~g~pt~~~~~yy~~rA~g~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~k~l~ 97 (376)
T 1icp_A 31 VVLAPLTRQRSYGYIPQPHAILHYSQRSTNGGLLIGEATVISETGIGYKDVPGIWTKEQVEAWKPIV 97 (376)
T ss_dssp EEECCCCCCCCGGGSCCHHHHHHHHHTCCTTCEEECCCEECSGGGCCSTTCCBCSSHHHHHHHHHHH
T ss_pred cEECCcCcCcCCCCCCCHHHHHHHHHhcCCeeEEEECceeeccccccCcccCccCCHHHHHHHHHHH
Confidence 6899999998866899999999999999999999999999999999999999999999999999995
No 14
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=99.63 E-value=2.6e-16 Score=116.35 Aligned_cols=67 Identities=19% Similarity=0.242 Sum_probs=63.1
Q ss_pred CEEccCCCCcC--CCCCCCHHHHHHHHHhccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhh
Q 048070 1 IVLAPLTRVRS--YNNIPRPHSILYYSQRTIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVF 67 (87)
Q Consensus 1 IVmAPM~~~~~--~dG~~t~~~i~yY~~RAkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~ 67 (87)
|+||||++.++ +||.+|+++++||++||+| +||||+|.+.|++.+..+++++++|+|+++++||+|.
T Consensus 20 iv~aPm~~~~~~~~~g~~~~~~~~~y~~rA~gG~gliite~~~v~~~g~~~~~~~~i~~d~~~~~~~~~~ 89 (338)
T 1z41_A 20 IVMSPMCMYSSHEKDGKLTPFHMAHYISRAIGQVGLIIVEASAVNPQGRITDQDLGIWSDEHIEGFAKLT 89 (338)
T ss_dssp EEECCCCCCCCTTSSSCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSTHHHHHHHHHH
T ss_pred cEECCcCCCcCCCCCCCCCHHHHHHHHHHHcCCCCEEEeCCeeccccccCCCCCcccCCHHHHHHHHHHH
Confidence 68999999887 4899999999999999995 8999999999999999999999999999999999986
No 15
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=99.62 E-value=7.3e-16 Score=115.40 Aligned_cols=66 Identities=33% Similarity=0.469 Sum_probs=62.5
Q ss_pred CEEccCCCCcC--CCCCCCHHHHHHHHHhccCCcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhh
Q 048070 1 IVLAPLTRVRS--YNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVF 67 (87)
Q Consensus 1 IVmAPM~~~~~--~dG~~t~~~i~yY~~RAkGaGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~ 67 (87)
||||||++.++ +||.+|+.+++||.+|| |+||||+|.+.|++.+..+++++++|+|+++++||+|.
T Consensus 20 iv~aPm~~~~a~~~~g~~t~~~~~~y~~rA-g~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~~~l~ 87 (364)
T 1vyr_A 20 VFMAPLTRLRSIEPGDIPTPLMGEYYRQRA-SAGLIISEATQISAQAKGYAGAPGLHSPEQIAAWKKIT 87 (364)
T ss_dssp EEECCCCCCCCBTTTTBCCHHHHHHHHHTT-TSSEEEEEEEESSSTTCCSTTCCBSSSHHHHHHHHHHH
T ss_pred cEECCCCCCcccCCCCCCCHHHHHHHHHHh-cCCEEEEccccccccccCCCCCcccCCHHHHHHHHHHH
Confidence 68999999886 58999999999999999 69999999999999999999999999999999999995
No 16
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=99.60 E-value=7.9e-16 Score=115.84 Aligned_cols=66 Identities=35% Similarity=0.517 Sum_probs=62.8
Q ss_pred CEEccCCCCcCCCCCCCHHHHHHHHHhccCCcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhh
Q 048070 1 IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVF 67 (87)
Q Consensus 1 IVmAPM~~~~~~dG~~t~~~i~yY~~RAkGaGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~ 67 (87)
||||||++++++||.+|+.+++||.+||+ +||||+|.+.|++.+..+++++++|+|+++++||+|.
T Consensus 26 iv~aPm~~~~a~~g~pt~~~~~~y~~rA~-~GLiitE~~~v~~~g~~~~~~~gi~~d~~i~~~k~l~ 91 (377)
T 2r14_A 26 VIMAPLTRSRTPDSVPGRLQQIYYGQRAS-AGLIISEATNISPTARGYVYTPGIWTDAQEAGWKGVV 91 (377)
T ss_dssp EEECCCCCCCCTTSCCCHHHHHHHHHTTT-SSCEEEEEEESSGGGCCBTTCCBSSSHHHHHHHHHHH
T ss_pred eEECCCcCCcCCCCCCCHHHHHHHHHHhc-CCEEEEcceeeccccccCCCCcccCCHHHHHHHHHHH
Confidence 68999999888899999999999999996 8999999999999999999999999999999999995
No 17
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=99.58 E-value=1.8e-15 Score=113.31 Aligned_cols=66 Identities=29% Similarity=0.468 Sum_probs=62.4
Q ss_pred CEEccCCCCcC--CCCCCCHHHHHHHHHhccCCcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhh
Q 048070 1 IVLAPLTRVRS--YNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVF 67 (87)
Q Consensus 1 IVmAPM~~~~~--~dG~~t~~~i~yY~~RAkGaGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~ 67 (87)
||||||++.++ +||.+|+++++||.+||+ +||||+|.+.|++.+..+++++++|+|+++++||+|.
T Consensus 20 iv~aPm~~~~a~~~~g~~t~~~~~~y~~rA~-~GLiite~~~v~~~g~~~~~~~gi~~d~~i~~~~~l~ 87 (365)
T 2gou_A 20 IVMPPMTRSRASQPGDVANHMMAIYYAQRAS-AGLIVSEGTQISPTAKGYAWTPGIYTPEQIAGWRIVT 87 (365)
T ss_dssp EEECCCCCCCCBTTTTBCCHHHHHHHHTTTT-SSEEEEEEEESSGGGCCSTTCCBSSSHHHHHHHHHHH
T ss_pred eEECCCCCCcccCCCCCCCHHHHHHHHHHhc-CCEEEECceeecccccCCCCCCccCCHHHHHHHHHHH
Confidence 68999999886 499999999999999996 8999999999999999999999999999999999995
No 18
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.47 E-value=3.3e-14 Score=111.78 Aligned_cols=67 Identities=6% Similarity=-0.017 Sum_probs=61.4
Q ss_pred CEEccCCCCcCCCCCCCHHHHHHHHHhccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhh
Q 048070 1 IVLAPLTRVRSYNNIPRPHSILYYSQRTIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVF 67 (87)
Q Consensus 1 IVmAPM~~~~~~dG~~t~~~i~yY~~RAkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~ 67 (87)
|+||||++++++++.+++++++||++||+| +||||+|.+.|++.+..+++++++|+|+++++||++.
T Consensus 20 i~~apm~~~~~~~~~~~~~~~~~y~~ra~gg~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (671)
T 1ps9_A 20 VLMGSMHTGLEEYPDGAERLAAFYAERARHGVALIVSGGIAPDLTGVGMEGGAMLNDASQIPHHRTIT 87 (671)
T ss_dssp EEECCCCCSCTTSTTHHHHHHHHHHHHHHTTCSEEEEEEEBSSSTTCSBTTCCBCCSGGGHHHHHHHH
T ss_pred eEECCccCCcCCCCCCcHHHHHHHHHHhcCCCCEEEecccccCccccCCCCCCccCCHHHHHHHHHHH
Confidence 589999987765567789999999999995 8999999999999999999999999999999999985
No 19
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.22 E-value=8.2e-12 Score=99.41 Aligned_cols=65 Identities=9% Similarity=-0.021 Sum_probs=55.9
Q ss_pred CEEccCCCCcCCCCCCCHHHHHHHHHhccC-CcEEEecccccCCCCCCCCC-CccCCCHHHHhhHHHhh
Q 048070 1 IVLAPLTRVRSYNNIPRPHSILYYSQRTIN-GGFLIAEATGVSDTAQGLSI-TRNSFLNARLWYLYWVF 67 (87)
Q Consensus 1 IVmAPM~~~~~~dG~~t~~~i~yY~~RAkG-aGLIIte~~~V~~~g~~~~~-~~~i~~d~~i~~Lk~~~ 67 (87)
|+||||++.++ ++.++ ++++||++||+| +||||+|.+.|++.+..+++ ++++|+|+++++||++.
T Consensus 24 iv~apm~~~~~-~~~~~-~~~~~y~~ra~gG~Gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (729)
T 1o94_A 24 FYQVPHCIGAG-SDKPG-FQSAHRSVKAEGGWAALNTEYCSINPESDDTHRLSARIWDEGDVRNLKAMT 90 (729)
T ss_dssp EEECCCCCSCT-TTCHH-HHHHHHHHHHHTTCSEEEEEEEESSTTSCCTTSCCEECSSHHHHHHHHHHH
T ss_pred cEECCCcCCcC-CCCcH-HHHHHHHHHhcCCCCEEEEcceEecCcccCCCCCCCccCChHHhHHHHHHH
Confidence 68999998654 34443 999999999995 89999999999998877665 58999999999999995
No 20
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.09 E-value=7.6e-11 Score=93.04 Aligned_cols=65 Identities=9% Similarity=-0.020 Sum_probs=53.6
Q ss_pred CEEccCCCCcCCCCCCCHHH-HHHHHHhccC-CcEEEecccccCCCCCCCCCC-ccCCCHHHHhhHHHhhh
Q 048070 1 IVLAPLTRVRSYNNIPRPHS-ILYYSQRTIN-GGFLIAEATGVSDTAQGLSIT-RNSFLNARLWYLYWVFA 68 (87)
Q Consensus 1 IVmAPM~~~~~~dG~~t~~~-i~yY~~RAkG-aGLIIte~~~V~~~g~~~~~~-~~i~~d~~i~~Lk~~~~ 68 (87)
|+||||++.. |.+++.. ..||++||+| +||||+|.+.|++.+..+++. +++|+|+++++||++..
T Consensus 29 iv~apm~~~~---~~~~~~~~~~~~~~~a~gG~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (690)
T 3k30_A 29 FYQVPHCNGM---GYRDPSAQASMRKIKAEGGWSAVCTEQVEIHATSDIAPFIELRIWDDQDLPALKRIAD 96 (690)
T ss_dssp EEECCCCCSC---SSSCHHHHHHHHHHHHHTTCSEEEEEEEECSGGGCCTTSCCEECSSGGGHHHHHHHHH
T ss_pred eEeCCCcCCC---CCCChHHHHHHHHHHhccCCEEEEecceEeccccccCCCcCCccCCHHHHHHHHHHHH
Confidence 6899998753 4455444 4577889996 899999999999998888875 69999999999999975
No 21
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=93.93 E-value=0.021 Score=41.22 Aligned_cols=34 Identities=15% Similarity=0.240 Sum_probs=26.5
Q ss_pred CEEccCCCCcCCCCCCCHHHHHHHHHhcc-CCcEEEecccccCC
Q 048070 1 IVLAPLTRVRSYNNIPRPHSILYYSQRTI-NGGFLIAEATGVSD 43 (87)
Q Consensus 1 IVmAPM~~~~~~dG~~t~~~i~yY~~RAk-GaGLIIte~~~V~~ 43 (87)
|++|||+... | ..|+..+++ |+||+++|.+.+++
T Consensus 7 i~~APM~~~t--~-------~~~r~~~~~~G~gli~te~~~~~~ 41 (318)
T 1vhn_A 7 VGLAPMAGYT--D-------SAFRTLAFEWGADFAFSEMVSAKG 41 (318)
T ss_dssp EEECCCTTTC--S-------HHHHHHHHTTTCCCEECSCEEHHH
T ss_pred EEECCCCCCC--c-------HHHHHHHHHHCcCEEEeCCEEEcc
Confidence 5899999542 1 478888887 58999999987754
No 22
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=93.49 E-value=0.028 Score=41.31 Aligned_cols=35 Identities=17% Similarity=0.185 Sum_probs=27.6
Q ss_pred CEEccCCCCcCCCCCCCHHHHHHHHHhccCCcEEEecccccC
Q 048070 1 IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVS 42 (87)
Q Consensus 1 IVmAPM~~~~~~dG~~t~~~i~yY~~RAkGaGLIIte~~~V~ 42 (87)
|++|||.. +|+....|+.+++.|.||+++|.+.++
T Consensus 6 iv~APM~g-------~td~~~r~~~r~~Gg~gli~te~~~~~ 40 (350)
T 3b0p_A 6 LSVAPMVD-------RTDRHFRFLVRQVSLGVRLYTEMTVDQ 40 (350)
T ss_dssp EEECCCTT-------TSSHHHHHHHHHHCSSSBEECCCEEHH
T ss_pred EEECCCCC-------CCHHHHHHHHHHcCCCCEEEeCCEEec
Confidence 58999982 789999997655545799999988654
No 23
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=83.90 E-value=2.4 Score=30.06 Aligned_cols=62 Identities=5% Similarity=0.054 Sum_probs=44.1
Q ss_pred EEccCCCCcCCCCCCCHHHHHHHHHh--ccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhhcCee
Q 048070 2 VLAPLTRVRSYNNIPRPHSILYYSQR--TIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFASPFG 72 (87)
Q Consensus 2 VmAPM~~~~~~dG~~t~~~i~yY~~R--AkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~~~~~ 72 (87)
+++||.|...+||.+..+.++-+.++ ..| -|+++.+.+ .....+..+|..+-++.+.+.--|
T Consensus 3 v~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtT---------GE~~~Ls~eEr~~v~~~~~~~~~g 67 (288)
T 2nuw_A 3 IISPIITPFDKQGKVNVDALKTHAKNLLEKGIDAIFVNGTT---------GLGPALSKDEKRQNLNALYDVTHK 67 (288)
T ss_dssp EEEECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEETSTT---------TTGGGSCHHHHHHHHHHHTTTCSC
T ss_pred eEEeeecCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccc---------cChhhCCHHHHHHHHHHHHHHhCC
Confidence 46788887777888886666555554 236 588887755 235668888999989888876666
No 24
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=82.81 E-value=3.1 Score=29.55 Aligned_cols=62 Identities=10% Similarity=0.090 Sum_probs=43.6
Q ss_pred EEccCCCCcCCCCCCCHHHHHHHHHh--ccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhhcCee
Q 048070 2 VLAPLTRVRSYNNIPRPHSILYYSQR--TIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFASPFG 72 (87)
Q Consensus 2 VmAPM~~~~~~dG~~t~~~i~yY~~R--AkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~~~~~ 72 (87)
+.+||.|...+||.+..+.++-+.++ ..| -|+++.+.+ .....+..+|..+-++.+.+.--|
T Consensus 3 v~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~Gtt---------GE~~~Ls~eEr~~v~~~~~~~~~g 67 (293)
T 1w3i_A 3 IITPIITPFTKDNRIDKEKLKIHAENLIRKGIDKLFVNGTT---------GLGPSLSPEEKLENLKAVYDVTNK 67 (293)
T ss_dssp EEEECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTT---------TTGGGSCHHHHHHHHHHHHTTCSC
T ss_pred eEEEeeCCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccc---------cChhhCCHHHHHHHHHHHHHHcCC
Confidence 46788887777888876655555554 236 588887765 235568888888888888876656
No 25
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=78.42 E-value=0.42 Score=34.31 Aligned_cols=36 Identities=3% Similarity=-0.245 Sum_probs=24.1
Q ss_pred HHHHHhcc-CCcEEEecccccCCC-CCCCCCCccCCCH
Q 048070 22 LYYSQRTI-NGGFLIAEATGVSDT-AQGLSITRNSFLN 57 (87)
Q Consensus 22 ~yY~~RAk-GaGLIIte~~~V~~~-g~~~~~~~~i~~d 57 (87)
+|++.+++ |+|+++++.+.+++. +...++...+++|
T Consensus 69 ~~~~~~a~~G~g~i~~~~~~~~~~~g~~~pr~~~~~~d 106 (336)
T 1f76_A 69 ECIDALGAMGFGSIEIGTVTPRPQPGNDKPRLFRLVDA 106 (336)
T ss_dssp CCHHHHHHTTCSEEEEEEECSSCBCCSCSCCEEEETTT
T ss_pred HHHHHHHHcCccEEEeCCCCCCCCCCCCCcceeecccc
Confidence 48899999 589999999988753 3333444444433
No 26
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=73.41 E-value=6.3 Score=28.13 Aligned_cols=59 Identities=12% Similarity=-0.050 Sum_probs=40.2
Q ss_pred EEccCCCCcCCCCCCCHHHHHHHHHh--ccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhhc
Q 048070 2 VLAPLTRVRSYNNIPRPHSILYYSQR--TIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFAS 69 (87)
Q Consensus 2 VmAPM~~~~~~dG~~t~~~i~yY~~R--AkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~~ 69 (87)
+.+|+.+...+||.+..+.++-+.++ ..| -|+++.+.+. ....+..+|..+-++.+.+.
T Consensus 20 v~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttG---------E~~~Ls~~Er~~v~~~~~~~ 81 (304)
T 3cpr_A 20 VGVAMVTPFTESGDIDIAAGREVAAYLVDKGLDSLVLAGTTG---------ESPTTTAAEKLELLKAVREE 81 (304)
T ss_dssp EEEECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTT---------TTTTSCHHHHHHHHHHHHHH
T ss_pred eEEeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECcccc---------ChhhCCHHHHHHHHHHHHHH
Confidence 46788887777888986666555555 236 5888877652 35557778888877777653
No 27
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=73.24 E-value=6.4 Score=27.84 Aligned_cols=59 Identities=7% Similarity=0.018 Sum_probs=38.9
Q ss_pred EEccCCCCcCCCCCCCHHHHHHHHHh--c-cC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhhc
Q 048070 2 VLAPLTRVRSYNNIPRPHSILYYSQR--T-IN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFAS 69 (87)
Q Consensus 2 VmAPM~~~~~~dG~~t~~~i~yY~~R--A-kG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~~ 69 (87)
+.+|+.|...+||.+..+.++-+.++ . .| -|+++.+.+. ....+..+|..+-++.+.+.
T Consensus 7 v~~a~vTPf~~dg~iD~~~l~~lv~~li~~~Gv~gl~~~GttG---------E~~~Ls~~Er~~v~~~~~~~ 69 (293)
T 1f6k_A 7 IFSALLVSFNEDGTINEKGLRQIIRHNIDKMKVDGLYVGGSTG---------ENFMLSTEEKKEIFRIAKDE 69 (293)
T ss_dssp EEEECCCCBCTTSCBCHHHHHHHHHHHHHTSCCSEEEESSGGG---------TGGGSCHHHHHHHHHHHHHH
T ss_pred eEEeeEcCCCCCCCcCHHHHHHHHHHHHhhCCCcEEEeCcccc---------chhhCCHHHHHHHHHHHHHH
Confidence 46778777777888876555444443 3 36 5888877652 35567778888777777643
No 28
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=72.71 E-value=4.4 Score=28.63 Aligned_cols=61 Identities=10% Similarity=0.047 Sum_probs=42.1
Q ss_pred EEccCCCCcCCCCCCCHHHHHHHHHh--ccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhhcCee
Q 048070 2 VLAPLTRVRSYNNIPRPHSILYYSQR--TIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFASPFG 72 (87)
Q Consensus 2 VmAPM~~~~~~dG~~t~~~i~yY~~R--AkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~~~~~ 72 (87)
+.+|+.|... ||.+..+.++-+.++ ..| -|+++.+.+ .....+..+|..+-++.+.+.--|
T Consensus 3 v~~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~v~Gtt---------GE~~~Ls~~Er~~v~~~~~~~~~g 66 (286)
T 2r91_A 3 IVAPVITTFR-GGRLDPELFANHVKNITSKGVDVVFVAGTT---------GLGPALSLQEKMELTDAATSAARR 66 (286)
T ss_dssp EEEECCCCEE-TTEECHHHHHHHHHHHHHTTCCEEEETSTT---------TTGGGSCHHHHHHHHHHHHHHCSS
T ss_pred eEEeEecCcC-CCccCHHHHHHHHHHHHHCCCCEEEECccc---------cChhhCCHHHHHHHHHHHHHHhCC
Confidence 4677877776 888876655555554 246 588887755 235668888888888888876555
No 29
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=72.28 E-value=12 Score=26.65 Aligned_cols=59 Identities=14% Similarity=0.058 Sum_probs=42.0
Q ss_pred EEccCCCCcCCCCCCCHHHHHHHHHhc--cC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhhc
Q 048070 2 VLAPLTRVRSYNNIPRPHSILYYSQRT--IN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFAS 69 (87)
Q Consensus 2 VmAPM~~~~~~dG~~t~~~i~yY~~RA--kG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~~ 69 (87)
+.+||.|...+||.+..+.+.-+.++- .| -|+++.+.+. ....+..+|..+-++.+.+.
T Consensus 18 i~~alvTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTG---------E~~~Ls~~Er~~v~~~~~~~ 79 (307)
T 3s5o_A 18 IYPPVTTPFTATAEVDYGKLEENLHKLGTFPFRGFVVQGSNG---------EFPFLTSSERLEVVSRVRQA 79 (307)
T ss_dssp EECBCCCCBCTTSCBCHHHHHHHHHHHTTSCCSEEEESSGGG---------TGGGSCHHHHHHHHHHHHHT
T ss_pred eEEeeEccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECcccc---------chhhCCHHHHHHHHHHHHHH
Confidence 567888888789999876666555552 36 5888887662 35557778888888877764
No 30
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=70.86 E-value=7.2 Score=28.28 Aligned_cols=59 Identities=10% Similarity=-0.162 Sum_probs=39.8
Q ss_pred EEccCCCCcCCCCCCCHHHHHHHHHhc--cC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhhc
Q 048070 2 VLAPLTRVRSYNNIPRPHSILYYSQRT--IN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFAS 69 (87)
Q Consensus 2 VmAPM~~~~~~dG~~t~~~i~yY~~RA--kG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~~ 69 (87)
+.+|+.+...+||.+..+.++-+.++- .| -|+++.+.+ .....+..+|..+-++.+.+.
T Consensus 38 v~~a~vTPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtT---------GE~~~Ls~eEr~~vi~~~ve~ 99 (332)
T 2r8w_A 38 LSAFPITPADEAGRVDIEAFSALIARLDAAEVDSVGILGST---------GIYMYLTREERRRAIEAAATI 99 (332)
T ss_dssp EEECCCCCBCTTCCBCHHHHHHHHHHHHHHTCSEEEESSTT---------TTGGGSCHHHHHHHHHHHHHH
T ss_pred eeEEeeCCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccc---------cChhhCCHHHHHHHHHHHHHH
Confidence 457777777778888866655555542 36 588887765 235567778888877777654
No 31
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=70.41 E-value=5.3 Score=28.28 Aligned_cols=59 Identities=3% Similarity=-0.110 Sum_probs=39.9
Q ss_pred EEccCCCCcCCCCCCCHHHHHHHHHhc--cC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhhc
Q 048070 2 VLAPLTRVRSYNNIPRPHSILYYSQRT--IN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFAS 69 (87)
Q Consensus 2 VmAPM~~~~~~dG~~t~~~i~yY~~RA--kG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~~ 69 (87)
+.+|+.|...+||.+..+.++-+.++- .| -|+++.+.+ .....+..+|..+-++.+.+.
T Consensus 5 v~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~Gtt---------GE~~~Ls~~Er~~v~~~~~~~ 66 (292)
T 2ojp_A 5 SIVAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGTT---------GESATLNHDEHADVVMMTLDL 66 (292)
T ss_dssp EEEECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTT---------TTGGGSCHHHHHHHHHHHHHH
T ss_pred eeeeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccc---------cchhhCCHHHHHHHHHHHHHH
Confidence 467888877778888866665555542 36 588887765 235567778888777777653
No 32
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=69.24 E-value=7.5 Score=27.70 Aligned_cols=59 Identities=19% Similarity=0.053 Sum_probs=39.6
Q ss_pred EEccCCCCcCCCCCCCHHHHHHHHHh--ccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhhc
Q 048070 2 VLAPLTRVRSYNNIPRPHSILYYSQR--TIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFAS 69 (87)
Q Consensus 2 VmAPM~~~~~~dG~~t~~~i~yY~~R--AkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~~ 69 (87)
+.+|+.|...+||.+..+.++-+.++ ..| -|+++.+.+ .....+..+|..+-++.+.+.
T Consensus 15 v~~a~vTPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtT---------GE~~~Ls~eEr~~v~~~~~~~ 76 (303)
T 2wkj_A 15 VMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGST---------GEAFVQSLSEREQVLEIVAEE 76 (303)
T ss_dssp EEEECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTT---------TTGGGSCHHHHHHHHHHHHHH
T ss_pred eEEeeEcCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECeec---------cChhhCCHHHHHHHHHHHHHH
Confidence 46788787777898886665555554 236 588887765 235557777877777776653
No 33
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=68.53 E-value=8.3 Score=27.31 Aligned_cols=60 Identities=13% Similarity=-0.009 Sum_probs=40.6
Q ss_pred EEccCCCCcCCCCCCCHHHHHHHHHh--ccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhhcC
Q 048070 2 VLAPLTRVRSYNNIPRPHSILYYSQR--TIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFASP 70 (87)
Q Consensus 2 VmAPM~~~~~~dG~~t~~~i~yY~~R--AkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~~~ 70 (87)
+.+|+.+...+||.+..+.++-+.++ +.| -|+++.+.+ .....+..+|..+-++.+.+.-
T Consensus 7 v~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~Gtt---------GE~~~Ls~~Er~~v~~~~~~~~ 69 (294)
T 3b4u_A 7 LSAALTTPFKTDGTVDIDAMIAHARRCLSNGCDSVTLFGTT---------GEGCSVGSRERQAILSSFIAAG 69 (294)
T ss_dssp EEEECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTT---------TTGGGSCHHHHHHHHHHHHHTT
T ss_pred EEEEEECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccc---------cChhhCCHHHHHHHHHHHHHHh
Confidence 46788887777888876655555554 236 488887755 2355677788888888777543
No 34
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=67.94 E-value=6.4 Score=28.04 Aligned_cols=59 Identities=5% Similarity=-0.059 Sum_probs=39.6
Q ss_pred EEccCCCCcCCCCCCCHHHHHHHHHh--ccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhhc
Q 048070 2 VLAPLTRVRSYNNIPRPHSILYYSQR--TIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFAS 69 (87)
Q Consensus 2 VmAPM~~~~~~dG~~t~~~i~yY~~R--AkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~~ 69 (87)
+.+||.|...+||.+..+.++-+.++ ..| -|+++.+.+ .....+..+|..+-++.+.+.
T Consensus 16 v~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtT---------GE~~~Ls~eEr~~v~~~~~~~ 77 (301)
T 1xky_A 16 IATAMVTPFDINGNIDFAKTTKLVNYLIDNGTTAIVVGGTT---------GESPTLTSEEKVALYRHVVSV 77 (301)
T ss_dssp EEEECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTT---------TTGGGSCHHHHHHHHHHHHHH
T ss_pred eEEeeECcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccc---------cChhhCCHHHHHHHHHHHHHH
Confidence 46778777777898986666555554 236 588887765 235557777877777776643
No 35
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=67.92 E-value=10 Score=27.09 Aligned_cols=60 Identities=8% Similarity=-0.128 Sum_probs=41.6
Q ss_pred EEccCCCCcCCCCCCCHHHHHHHHHhc--cC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhhcC
Q 048070 2 VLAPLTRVRSYNNIPRPHSILYYSQRT--IN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFASP 70 (87)
Q Consensus 2 VmAPM~~~~~~dG~~t~~~i~yY~~RA--kG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~~~ 70 (87)
+.+|+.|...+||.+..+.+.-+.++- .| -|+++.+.+. ....+..+|..+-++.+.+.-
T Consensus 12 v~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTG---------E~~~Lt~~Er~~v~~~~v~~~ 74 (313)
T 3dz1_A 12 TFAIAPTPFHDDGKIDDVSIDRLTDFYAEVGCEGVTVLGILG---------EAPKLDAAEAEAVATRFIKRA 74 (313)
T ss_dssp EEEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESTGGG---------TGGGSCHHHHHHHHHHHHHHC
T ss_pred EEEEeeCCCCCCCCcCHHHHHHHHHHHHHCCCCEEEeCccCc---------ChhhCCHHHHHHHHHHHHHHc
Confidence 467787877778888866555555552 36 5888887662 355677888888888777654
No 36
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=67.58 E-value=6.8 Score=28.03 Aligned_cols=59 Identities=7% Similarity=-0.140 Sum_probs=40.8
Q ss_pred EEccCCCCcCCCCCCCHHHHHHHHHh--ccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhhc
Q 048070 2 VLAPLTRVRSYNNIPRPHSILYYSQR--TIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFAS 69 (87)
Q Consensus 2 VmAPM~~~~~~dG~~t~~~i~yY~~R--AkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~~ 69 (87)
+++|+.+...+||.+..+.++-+.++ ..| -|+++.+.+. ....+..+|..+-++.+.+.
T Consensus 12 v~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTG---------E~~~Ls~~Er~~v~~~~~~~ 73 (309)
T 3fkr_A 12 IFPVVPTTFADTGDLDLASQKRAVDFMIDAGSDGLCILANFS---------EQFAITDDERDVLTRTILEH 73 (309)
T ss_dssp ECCBCCCCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSGGG---------TGGGSCHHHHHHHHHHHHHH
T ss_pred eEEeeeCCCCcCCCcCHHHHHHHHHHHHHcCCCEEEECcccc---------CcccCCHHHHHHHHHHHHHH
Confidence 45778777777899986666655555 236 5899888662 35557778887777777654
No 37
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=65.78 E-value=6.9 Score=27.64 Aligned_cols=57 Identities=7% Similarity=-0.015 Sum_probs=39.1
Q ss_pred EEccCCCCcCCCCCCCHHHHHHHHHh--ccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhh
Q 048070 2 VLAPLTRVRSYNNIPRPHSILYYSQR--TIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFA 68 (87)
Q Consensus 2 VmAPM~~~~~~dG~~t~~~i~yY~~R--AkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~ 68 (87)
+.+|+.+...+|| +..+.++-+.++ ..| -|+++.+.+. ....+..+|..+-++.+.+
T Consensus 6 v~~a~vTPf~~dg-iD~~~l~~lv~~li~~Gv~gl~~~GttG---------E~~~Ls~~Er~~v~~~~~~ 65 (291)
T 3a5f_A 6 SGVAIITPFTNTG-VDFDKLSELIEWHIKSKTDAIIVCGTTG---------EATTMTETERKETIKFVID 65 (291)
T ss_dssp EEEECCCCBCSSS-BCHHHHHHHHHHHHHTTCCEEEESSGGG---------TGGGSCHHHHHHHHHHHHH
T ss_pred eeeeeEcCcCCCC-cCHHHHHHHHHHHHHcCCCEEEECcccc---------ChhhCCHHHHHHHHHHHHH
Confidence 4678888777788 987666555555 236 5888877652 3455777787777777665
No 38
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=64.39 E-value=11 Score=26.96 Aligned_cols=59 Identities=12% Similarity=0.122 Sum_probs=40.3
Q ss_pred EEccCCCCcCCCCCCCHHHHHHHHHhc--cC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhhc
Q 048070 2 VLAPLTRVRSYNNIPRPHSILYYSQRT--IN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFAS 69 (87)
Q Consensus 2 VmAPM~~~~~~dG~~t~~~i~yY~~RA--kG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~~ 69 (87)
+.+|+.+...+||.+..+.++-+.++- .| -|+++.+.+. ....+..+|..+-++.+.+.
T Consensus 19 v~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttG---------E~~~Lt~~Er~~v~~~~~~~ 80 (304)
T 3l21_A 19 LLTAMVTPFSGDGSLDTATAARLANHLVDQGCDGLVVSGTTG---------ESPTTTDGEKIELLRAVLEA 80 (304)
T ss_dssp EEEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESSTTT---------TGGGSCHHHHHHHHHHHHHH
T ss_pred eEEEEECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCcccc---------chhhCCHHHHHHHHHHHHHH
Confidence 467777777778888866666555552 36 5888877652 35567778877777776653
No 39
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=64.28 E-value=7.9 Score=27.37 Aligned_cols=58 Identities=5% Similarity=-0.043 Sum_probs=39.0
Q ss_pred EEccCCCCcCCCCCCCHHHHHHHHHh--ccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhhc
Q 048070 2 VLAPLTRVRSYNNIPRPHSILYYSQR--TIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFAS 69 (87)
Q Consensus 2 VmAPM~~~~~~dG~~t~~~i~yY~~R--AkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~~ 69 (87)
+.+|+.|... ||.+..+.++-+.++ +.| -|+++.+.+ .....+..+|..+-++.+.+.
T Consensus 5 v~~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~~~Gtt---------GE~~~Ls~~Er~~v~~~~~~~ 65 (294)
T 2ehh_A 5 SIVALITPFK-EGEVDYEALGNLIEFHVDNGTDAILVCGTT---------GESPTLTFEEHEKVIEFAVKR 65 (294)
T ss_dssp EEEECCCCEE-TTEECHHHHHHHHHHHHTTTCCEEEESSTT---------TTGGGSCHHHHHHHHHHHHHH
T ss_pred eeeeeecCcC-CCCcCHHHHHHHHHHHHHCCCCEEEECccc---------cChhhCCHHHHHHHHHHHHHH
Confidence 4677777776 888886666555554 236 488887765 235567778888777777653
No 40
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=62.17 E-value=7.9 Score=27.86 Aligned_cols=59 Identities=10% Similarity=-0.041 Sum_probs=40.4
Q ss_pred EEccCCCCcC-CCCCCCHHHHHHHHHhc--cC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhhc
Q 048070 2 VLAPLTRVRS-YNNIPRPHSILYYSQRT--IN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFAS 69 (87)
Q Consensus 2 VmAPM~~~~~-~dG~~t~~~i~yY~~RA--kG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~~ 69 (87)
+++||.|... +||.+..+.++-+.++- .| -|+++.+.+. ....+..+|..+-++.+.+.
T Consensus 14 v~~a~vTPf~~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTG---------E~~~Ls~~Er~~v~~~~~~~ 76 (318)
T 3qfe_A 14 IWCPAVTFFDSKTDTLDLASQERYYAYLARSGLTGLVILGTNA---------EAFLLTREERAQLIATARKA 76 (318)
T ss_dssp EEEECCCCEETTTTEECHHHHHHHHHHHHTTTCSEEEESSGGG---------TGGGSCHHHHHHHHHHHHHH
T ss_pred eEEeeeCCccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCcccc---------ChhhCCHHHHHHHHHHHHHH
Confidence 4678888777 78988866655555552 36 5888888662 34557778887777777654
No 41
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=60.90 E-value=9.1 Score=27.42 Aligned_cols=59 Identities=7% Similarity=-0.219 Sum_probs=39.9
Q ss_pred EEccCCCCcCC-CCCCCHHHHHHHHHhc--cC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhhc
Q 048070 2 VLAPLTRVRSY-NNIPRPHSILYYSQRT--IN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFAS 69 (87)
Q Consensus 2 VmAPM~~~~~~-dG~~t~~~i~yY~~RA--kG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~~ 69 (87)
+.+|+.|...+ ||.+..+.++-+.++- .| -|+++.+.+. ....+..+|..+-++.+.+.
T Consensus 15 v~~a~vTPf~~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTG---------E~~~Ls~eEr~~v~~~~v~~ 77 (316)
T 3e96_A 15 ISGIPITPFRKSDGSIDWHHYKETVDRIVDNGIDVIVPCGNTS---------EFYALSLEEAKEEVRRTVEY 77 (316)
T ss_dssp EEECCCCCBCTTTCCBCHHHHHHHHHHHHTTTCCEECTTSGGG---------TGGGSCHHHHHHHHHHHHHH
T ss_pred eEEeeeCCccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCcccc---------CcccCCHHHHHHHHHHHHHH
Confidence 56788888777 8999876666555552 36 4777776552 35557777777777766654
No 42
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=60.59 E-value=13 Score=27.57 Aligned_cols=59 Identities=7% Similarity=-0.013 Sum_probs=39.9
Q ss_pred EEccCCCCcCCCCCCCHHHHHHHHHh--ccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhhc
Q 048070 2 VLAPLTRVRSYNNIPRPHSILYYSQR--TIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFAS 69 (87)
Q Consensus 2 VmAPM~~~~~~dG~~t~~~i~yY~~R--AkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~~ 69 (87)
+++||.+...+||.+..+.++-+.++ +.| -|+++.+.+. ....+..+|..+-++.+.+.
T Consensus 63 i~~alvTPF~~dg~ID~~al~~lv~~li~~Gv~Gl~v~GTTG---------E~~~Ls~eEr~~vi~~~ve~ 124 (360)
T 4dpp_A 63 VITAIKTPYLPDGRFDLEAYDDLVNIQIQNGAEGVIVGGTTG---------EGQLMSWDEHIMLIGHTVNC 124 (360)
T ss_dssp EEEECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTT---------TGGGSCHHHHHHHHHHHHHH
T ss_pred eEEEEeCcCCCCCCcCHHHHHHHHHHHHHcCCCEEEeccccc---------ChhhCCHHHHHHHHHHHHHH
Confidence 56788888777898986666555555 346 5888877652 34557777777777766543
No 43
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=60.18 E-value=8.7 Score=28.00 Aligned_cols=59 Identities=5% Similarity=0.031 Sum_probs=39.2
Q ss_pred EEccCCCCcCCCCCCCHHHHHHHHHh--ccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhhc
Q 048070 2 VLAPLTRVRSYNNIPRPHSILYYSQR--TIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFAS 69 (87)
Q Consensus 2 VmAPM~~~~~~dG~~t~~~i~yY~~R--AkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~~ 69 (87)
+.+|+.|...+||.+..+.++-+.++ ..| -|+++.+.+ .....+..+|..+-++.+.+.
T Consensus 35 v~~alvTPF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtT---------GE~~~Ls~eEr~~vi~~~ve~ 96 (343)
T 2v9d_A 35 IIPPVSTIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSG---------GEFSQLGAEERKAIARFAIDH 96 (343)
T ss_dssp ECCEECCCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSTT---------TTGGGSCHHHHHHHHHHHHHH
T ss_pred eEEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccc---------cChhhCCHHHHHHHHHHHHHH
Confidence 45677777767888876655555554 236 588887765 235567778887777777653
No 44
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=59.59 E-value=6.4 Score=27.98 Aligned_cols=59 Identities=8% Similarity=-0.063 Sum_probs=39.2
Q ss_pred EEccCCCCcCCCCCCCHHHHHHHHHh--ccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhhcC
Q 048070 2 VLAPLTRVRSYNNIPRPHSILYYSQR--TIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFASP 70 (87)
Q Consensus 2 VmAPM~~~~~~dG~~t~~~i~yY~~R--AkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~~~ 70 (87)
+.+|+.|.. +||.+..+.++-+.++ +.| -|+++.+.+ .....+..+|..+-++.+.+.-
T Consensus 12 v~~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gl~v~Gtt---------GE~~~Ls~~Er~~v~~~~~~~~ 73 (301)
T 3m5v_A 12 AMTALITPF-KNGKVDEQSYARLIKRQIENGIDAVVPVGTT---------GESATLTHEEHRTCIEIAVETC 73 (301)
T ss_dssp EEEECCCCE-ETTEECHHHHHHHHHHHHHTTCCEEECSSTT---------TTGGGSCHHHHHHHHHHHHHHH
T ss_pred eeEeeecCc-CCCCCCHHHHHHHHHHHHHcCCCEEEECccc---------cChhhCCHHHHHHHHHHHHHHh
Confidence 456777777 7888876665555555 236 488887754 2355677788888777776653
No 45
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=59.47 E-value=11 Score=27.03 Aligned_cols=59 Identities=8% Similarity=-0.022 Sum_probs=39.8
Q ss_pred EEccCCCCcCCCCCCCHHHHHHHHHhc--cC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhhc
Q 048070 2 VLAPLTRVRSYNNIPRPHSILYYSQRT--IN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFAS 69 (87)
Q Consensus 2 VmAPM~~~~~~dG~~t~~~i~yY~~RA--kG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~~ 69 (87)
+.+|+.|...+||.+..+.++-+.++- .| -|+++.+.+. ....+..+|..+-++.+.+.
T Consensus 27 v~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTG---------E~~~Ls~~Er~~v~~~~v~~ 88 (314)
T 3qze_A 27 SMVALVTPFDAQGRLDWDSLAKLVDFHLQEGTNAIVAVGTTG---------ESATLDVEEHIQVIRRVVDQ 88 (314)
T ss_dssp EEEECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSGGG---------TGGGCCHHHHHHHHHHHHHH
T ss_pred eEEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECcccc---------ChhhCCHHHHHHHHHHHHHH
Confidence 467787877778989876666666552 36 5888887652 34557677777766666543
No 46
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=59.27 E-value=9.6 Score=26.86 Aligned_cols=58 Identities=9% Similarity=-0.089 Sum_probs=39.2
Q ss_pred EEccCCCCcCCCCCCCHHHHHHHHHh--ccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhhc
Q 048070 2 VLAPLTRVRSYNNIPRPHSILYYSQR--TIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFAS 69 (87)
Q Consensus 2 VmAPM~~~~~~dG~~t~~~i~yY~~R--AkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~~ 69 (87)
+.+|+.|... ||.+..+.++-+.++ ..| -|+++.+.+ .....+..+|..+-++.+.+.
T Consensus 5 v~~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~~~Gtt---------GE~~~Ls~~Er~~v~~~~~~~ 65 (289)
T 2yxg_A 5 VYPAIITPFK-NKEVDFDGLEENINFLIENGVSGIVAVGTT---------GESPTLSHEEHKKVIEKVVDV 65 (289)
T ss_dssp EEEBCCCCEE-TTEECHHHHHHHHHHHHHTTCSEEEESSTT---------TTGGGSCHHHHHHHHHHHHHH
T ss_pred eeeeeecCcC-CCCcCHHHHHHHHHHHHHCCCCEEEECccc---------cChhhCCHHHHHHHHHHHHHH
Confidence 4677877776 888876665555554 236 588887765 235557778888877777653
No 47
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius}
Probab=57.60 E-value=7.6 Score=28.27 Aligned_cols=25 Identities=8% Similarity=-0.048 Sum_probs=19.8
Q ss_pred CCCCCCHHHHHHHHHhccCCcEEEe
Q 048070 12 YNNIPRPHSILYYSQRTINGGFLIA 36 (87)
Q Consensus 12 ~dG~~t~~~i~yY~~RAkGaGLIIt 36 (87)
.+++++++.+..+.+||+..||-|+
T Consensus 90 ~~~t~~~~~v~~~~~~Ak~~GL~V~ 114 (343)
T 3civ_A 90 PPVTVSDDEIASMAELAHALGLKVC 114 (343)
T ss_dssp TTTBCCHHHHHHHHHHHHHTTCEEE
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEE
Confidence 3678899999999999996565554
No 48
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=56.59 E-value=13 Score=26.55 Aligned_cols=59 Identities=12% Similarity=0.035 Sum_probs=37.2
Q ss_pred EEccCCCCcCCCCCCCHHHHHHHHHh--ccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhhc
Q 048070 2 VLAPLTRVRSYNNIPRPHSILYYSQR--TIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFAS 69 (87)
Q Consensus 2 VmAPM~~~~~~dG~~t~~~i~yY~~R--AkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~~ 69 (87)
+.+||.+...+||.+..+.++-+.++ ..| -|+++.+.+. ....+..+|..+-++.+.+.
T Consensus 11 v~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTG---------E~~~Ls~~Er~~v~~~~~~~ 72 (311)
T 3h5d_A 11 IITAFITPFHEDGSINFDAIPALIEHLLAHHTDGILLAGTTA---------ESPTLTHDEELELFAAVQKV 72 (311)
T ss_dssp EEEECCCCBCTTSSBCTTHHHHHHHHHHHTTCCCEEESSTTT---------TGGGSCHHHHHHHHHHHHHH
T ss_pred eEEeeecCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECcccc---------ChhhCCHHHHHHHHHHHHHH
Confidence 46777777766777764444444433 236 5888887652 35557777777777776654
No 49
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=56.41 E-value=22 Score=24.95 Aligned_cols=59 Identities=5% Similarity=-0.056 Sum_probs=40.0
Q ss_pred EEccCCCCcCCCCCCCHHHHHHHHHh--ccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhhc
Q 048070 2 VLAPLTRVRSYNNIPRPHSILYYSQR--TIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFAS 69 (87)
Q Consensus 2 VmAPM~~~~~~dG~~t~~~i~yY~~R--AkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~~ 69 (87)
+.+|+.|...+||.+..+.++-+.++ +.| -|+++.+.+. ....+..+|..+-++.+.+.
T Consensus 5 v~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttG---------E~~~Ls~~Er~~v~~~~~~~ 66 (291)
T 3tak_A 5 SIVAIVTPMLKDGGVDWKSLEKLVEWHIEQGTNSIVAVGTTG---------EASTLSMEEHTQVIKEIIRV 66 (291)
T ss_dssp EEEECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTTT---------TGGGSCHHHHHHHHHHHHHH
T ss_pred eEeeeECCCCCCCCcCHHHHHHHHHHHHHCCCCEEEECcccc---------ccccCCHHHHHHHHHHHHHH
Confidence 46788887777898886666555555 236 5888877652 34557777777777776653
No 50
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=54.94 E-value=9.5 Score=27.39 Aligned_cols=59 Identities=5% Similarity=-0.183 Sum_probs=39.6
Q ss_pred EEccCCCCcCCCCCCCHHHHHHHHHh--ccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhhc
Q 048070 2 VLAPLTRVRSYNNIPRPHSILYYSQR--TIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFAS 69 (87)
Q Consensus 2 VmAPM~~~~~~dG~~t~~~i~yY~~R--AkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~~ 69 (87)
+.+|+.|...+||.+..+.++-+.++ +.| -|+++.+.+. ....+..+|..+-++.+.+.
T Consensus 28 v~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gi~v~GtTG---------E~~~Ls~~Er~~v~~~~v~~ 89 (315)
T 3na8_A 28 IIGYTITPFAADGGLDLPALGRSIERLIDGGVHAIAPLGSTG---------EGAYLSDPEWDEVVDFTLKT 89 (315)
T ss_dssp EEEECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEECSSGGG---------TGGGSCHHHHHHHHHHHHHH
T ss_pred eEEEeeCcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECcccc---------ChhhCCHHHHHHHHHHHHHH
Confidence 46778777777888886666555555 246 4888877652 34557777777777776653
No 51
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=54.63 E-value=11 Score=27.08 Aligned_cols=59 Identities=5% Similarity=-0.282 Sum_probs=39.3
Q ss_pred EEccCCCCc-CCCCCCCHHHHHHHHHh--ccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhhc
Q 048070 2 VLAPLTRVR-SYNNIPRPHSILYYSQR--TIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFAS 69 (87)
Q Consensus 2 VmAPM~~~~-~~dG~~t~~~i~yY~~R--AkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~~ 69 (87)
+.+|+.+.. .+||.+..+.++-+.++ ..| -|+++.+.+. ....+..+|..+-++.+.+.
T Consensus 15 v~~a~vTPF~~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTG---------E~~~Ls~eEr~~vi~~~~~~ 77 (314)
T 3d0c_A 15 ISGINIVPFLEGTREIDWKGLDDNVEFLLQNGIEVIVPNGNTG---------EFYALTIEEAKQVATRVTEL 77 (314)
T ss_dssp EEECCCCCBCTTTCCBCHHHHHHHHHHHHHTTCSEECTTSGGG---------TGGGSCHHHHHHHHHHHHHH
T ss_pred eEEeeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEECcccC---------ChhhCCHHHHHHHHHHHHHH
Confidence 567888877 67899986665555554 236 4777766542 35567778887777777653
No 52
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=54.53 E-value=25 Score=24.83 Aligned_cols=58 Identities=10% Similarity=0.001 Sum_probs=38.9
Q ss_pred EEccCCCCcCCCCCCCHHHHHHHHHh--ccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhh
Q 048070 2 VLAPLTRVRSYNNIPRPHSILYYSQR--TIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFA 68 (87)
Q Consensus 2 VmAPM~~~~~~dG~~t~~~i~yY~~R--AkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~ 68 (87)
+.+|+.|...+||.+..+.++-+.++ ..| -|+++.+.+. ....+..+|..+-++.+.+
T Consensus 11 v~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttG---------E~~~Ls~~Er~~v~~~~~~ 71 (297)
T 3flu_A 11 SLVALITPMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGTTG---------ESATLSVEEHTAVIEAVVK 71 (297)
T ss_dssp EEEECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTT---------TGGGSCHHHHHHHHHHHHH
T ss_pred eEEeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCcccc---------CcccCCHHHHHHHHHHHHH
Confidence 45677777777898986666655555 236 5888877652 3455777777777776655
No 53
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=53.46 E-value=6.7 Score=27.92 Aligned_cols=59 Identities=12% Similarity=-0.053 Sum_probs=40.2
Q ss_pred EEccCCCCcCCCCCCCHHHHHHHHHh--ccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhhc
Q 048070 2 VLAPLTRVRSYNNIPRPHSILYYSQR--TIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFAS 69 (87)
Q Consensus 2 VmAPM~~~~~~dG~~t~~~i~yY~~R--AkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~~ 69 (87)
+.+|+.|...+||.+..+.+.-+.++ ..| -|+++.+.+. ....+..+|..+-++.+.+.
T Consensus 8 v~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttG---------E~~~Ls~~Er~~v~~~~~~~ 69 (300)
T 3eb2_A 8 VFPYLVSPVDAEGRVRADVMGRLCDDLIQAGVHGLTPLGSTG---------EFAYLGTAQREAVVRATIEA 69 (300)
T ss_dssp EEEBCCCCBCTTSCBCHHHHHHHHHHHHHTTCSCBBTTSGGG---------TGGGCCHHHHHHHHHHHHHH
T ss_pred eEEEEeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECcccc---------CccccCHHHHHHHHHHHHHH
Confidence 46788887777888886666655555 236 4887777552 35557778877777777654
No 54
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=52.81 E-value=11 Score=26.60 Aligned_cols=68 Identities=10% Similarity=-0.002 Sum_probs=42.0
Q ss_pred CEEccCCCCcCCCCCCCHHHHHHHHHhcc--CCcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhhcCeeEEEEeC
Q 048070 1 IVLAPLTRVRSYNNIPRPHSILYYSQRTI--NGGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFASPFGIMIIVG 78 (87)
Q Consensus 1 IVmAPM~~~~~~dG~~t~~~i~yY~~RAk--GaGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~~~~~~~~~~~ 78 (87)
++.+|+.|...+||.+..+.++-+.++-. --|+++.+.+ .....+..+|..+-++.+.+ ..-++.-+|
T Consensus 1 ~v~~a~vTPf~~dg~iD~~~l~~lv~~li~~v~gl~v~Gtt---------GE~~~Ls~~Er~~v~~~~~~-rvpviaGvg 70 (283)
T 2pcq_A 1 MILPPIPTPFDREGRLDEEAFRELAQALEPLVDGLLVYGSN---------GEGVHLTPEERARGLRALRP-RKPFLVGLM 70 (283)
T ss_dssp CEECEECCCBCTTCCBCHHHHHHHHHHHGGGSSCCEETCTT---------TTGGGSCHHHHHHHHHTCCC-SSCCEEEEC
T ss_pred CeeeeEeCCCCCCCCcCHHHHHHHHHHHHhhCCEEEECCcC---------cCchhcCHHHHHHHHHHHHh-CCcEEEeCC
Confidence 46788888877788887655444444311 2477776654 23556777888888887776 333333333
No 55
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=52.25 E-value=50 Score=23.96 Aligned_cols=68 Identities=9% Similarity=0.048 Sum_probs=41.6
Q ss_pred EEccCCCCcCCCCCCCHHHHHHHHHh--ccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhhcCeeEEEEeC
Q 048070 2 VLAPLTRVRSYNNIPRPHSILYYSQR--TIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFASPFGIMIIVG 78 (87)
Q Consensus 2 VmAPM~~~~~~dG~~t~~~i~yY~~R--AkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~~~~~~~~~~~ 78 (87)
+.+|+.+...+||.+..+.++-+.++ ..| -|+++.+.+. ....+..+|..+-++...+...-++.-+|
T Consensus 30 v~~alvTPF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTG---------E~~~Ls~eEr~~vi~~~~~grvpViaGvg 100 (344)
T 2hmc_A 30 VIPALMTPCRQDRTPDFDALVRKGKELIADGMSAVVYCGSMG---------DWPLLTDEQRMEGVERLVKAGIPVIVGTG 100 (344)
T ss_dssp EEEBCCCCBCTTSSBCHHHHHHHHHHHHHTTCCCEEESSGGG---------TGGGSCHHHHHHHHHHHHHTTCCEEEECC
T ss_pred eEEeeeCCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccCc---------ChhhCCHHHHHHHHHHHhCCCCcEEEecC
Confidence 45777777767888986665555554 236 5888877652 34557777777777763333333443333
No 56
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=49.42 E-value=7.1 Score=27.76 Aligned_cols=58 Identities=10% Similarity=-0.009 Sum_probs=38.6
Q ss_pred EEccCCCCcCCCCCCCHHHHHHHHHh--ccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhhc
Q 048070 2 VLAPLTRVRSYNNIPRPHSILYYSQR--TIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFAS 69 (87)
Q Consensus 2 VmAPM~~~~~~dG~~t~~~i~yY~~R--AkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~~ 69 (87)
+.+|+.|.. +||.+..+.++-+.++ +.| -|+++.+.+. ....+..+|..+-++.+.+.
T Consensus 5 v~~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttG---------E~~~Ls~~Er~~v~~~~~~~ 65 (297)
T 2rfg_A 5 SLIAMITPF-INGQVDEKALAGLVDWQIKHGAHGLVPVGTTG---------ESPTLTEEEHKRVVALVAEQ 65 (297)
T ss_dssp EEEECCCCE-ETTEECHHHHHHHHHHHHHTTCSEEECSSGGG---------TGGGSCHHHHHHHHHHHHHH
T ss_pred EEEeeecCc-CCCCcCHHHHHHHHHHHHHcCCCEEEECcccc---------chhhCCHHHHHHHHHHHHHH
Confidence 467777777 7888876655555554 236 5888877652 35557777877777776653
No 57
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=47.98 E-value=28 Score=24.91 Aligned_cols=58 Identities=9% Similarity=-0.011 Sum_probs=38.9
Q ss_pred EEccCCCCcCCCCCCCHHHHHHHHHh--ccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhh
Q 048070 2 VLAPLTRVRSYNNIPRPHSILYYSQR--TIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFA 68 (87)
Q Consensus 2 VmAPM~~~~~~dG~~t~~~i~yY~~R--AkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~ 68 (87)
+.+|+.|...+||.+..+.++-+.++ ..| -|+++.+.+ .....+..+|..+-++.+.+
T Consensus 26 v~~alvTPf~~dg~iD~~~l~~li~~li~~Gv~Gl~v~GtT---------GE~~~Ls~~Er~~v~~~~v~ 86 (315)
T 3si9_A 26 AVTALITPFDDNGAIDEKAFCNFVEWQITQGINGVSPVGTT---------GESPTLTHEEHKRIIELCVE 86 (315)
T ss_dssp EEEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEECSSTT---------TTGGGSCHHHHHHHHHHHHH
T ss_pred eeEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccc---------cCccccCHHHHHHHHHHHHH
Confidence 46777777777898986666655555 236 588887755 23555777777777776664
No 58
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=47.17 E-value=6.4 Score=27.83 Aligned_cols=58 Identities=7% Similarity=-0.058 Sum_probs=38.5
Q ss_pred EEccCCCCcCCCCCCCHHHHHHHHHh--ccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhhc
Q 048070 2 VLAPLTRVRSYNNIPRPHSILYYSQR--TIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFAS 69 (87)
Q Consensus 2 VmAPM~~~~~~dG~~t~~~i~yY~~R--AkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~~ 69 (87)
+.+|+.|.. +||.+..+.++-+.++ ..| -|+++.+.+. ....+..+|..+-++.+.+.
T Consensus 5 v~~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttG---------E~~~Ls~~Er~~v~~~~~~~ 65 (292)
T 2vc6_A 5 SITALVTPF-ADDRIDEVALHDLVEWQIEEGSFGLVPCGTTG---------ESPTLSKSEHEQVVEITIKT 65 (292)
T ss_dssp EEEECCCCE-ETTEECHHHHHHHHHHHHHTTCSEEETTSGGG---------TGGGSCHHHHHHHHHHHHHH
T ss_pred EEEeeecCc-CCCCcCHHHHHHHHHHHHHcCCCEEEECcccc---------ChhhCCHHHHHHHHHHHHHH
Confidence 467787777 8888886666555555 236 4777776552 35557777877777777653
No 59
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=45.01 E-value=15 Score=26.09 Aligned_cols=58 Identities=10% Similarity=-0.027 Sum_probs=38.0
Q ss_pred EEccCCCCcCCCCCCCHHHHHHHHHh--ccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhhc
Q 048070 2 VLAPLTRVRSYNNIPRPHSILYYSQR--TIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFAS 69 (87)
Q Consensus 2 VmAPM~~~~~~dG~~t~~~i~yY~~R--AkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~~ 69 (87)
+.+|+.|... ||.+..+.++-+.++ +.| -|+++.+.+. ....+..+|..+-++.+.+.
T Consensus 17 v~~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTG---------E~~~Ls~eEr~~vi~~~~~~ 77 (306)
T 1o5k_A 17 VGTAIVTPFK-NGELDLESYERLVRYQLENGVNALIVLGTTG---------ESPTVNEDEREKLVSRTLEI 77 (306)
T ss_dssp EEEECCCCEE-TTEECHHHHHHHHHHHHHTTCCEEEESSGGG---------TGGGCCHHHHHHHHHHHHHH
T ss_pred eeeeeecCcC-CCCcCHHHHHHHHHHHHHcCCCEEEeCcccc---------chhhCCHHHHHHHHHHHHHH
Confidence 4567777666 888876655555554 236 5888877652 34557777777777776643
No 60
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=34.77 E-value=33 Score=24.34 Aligned_cols=58 Identities=14% Similarity=0.144 Sum_probs=31.2
Q ss_pred CEEccCCCCcCCCCCCCHHHHHHHHHhccCCcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhhcCeeEEEEe
Q 048070 1 IVLAPLTRVRSYNNIPRPHSILYYSQRTINGGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFASPFGIMIIV 77 (87)
Q Consensus 1 IVmAPM~~~~~~dG~~t~~~i~yY~~RAkGaGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~~~~~~~~~~ 77 (87)
|+++||... .+.++... ..++.+.|++..+.. ++. .-.+.++.+|++...|||+-+++
T Consensus 15 ii~apM~g~------s~~~la~a-v~~aG~lG~i~~~~~--~~~----------~~~~~i~~i~~~~~~p~gvnl~~ 72 (332)
T 2z6i_A 15 IFQGGMAWV------ADGDLAGA-VSKAGGLGIIGGGNA--PKE----------VVKANIDKIKSLTDKPFGVNIML 72 (332)
T ss_dssp EEECCCTTT------CCHHHHHH-HHHHTSBEEEECTTC--CHH----------HHHHHHHHHHHHCCSCEEEEECT
T ss_pred EEeCCCCCC------CcHHHHHH-HHhCCCcEEeCCCCC--CHH----------HHHHHHHHHHHhcCCCEEEEecC
Confidence 467888731 24444443 555544577765421 110 01345666777666788875554
No 61
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=28.81 E-value=41 Score=23.63 Aligned_cols=58 Identities=14% Similarity=-0.016 Sum_probs=36.4
Q ss_pred EEccCCCCcCCCCCCCHHHHHHHHHh--ccC-CcEEEecccccCCCCCCCCCCccCCCHHHHhhHHHhhhc
Q 048070 2 VLAPLTRVRSYNNIPRPHSILYYSQR--TIN-GGFLIAEATGVSDTAQGLSITRNSFLNARLWYLYWVFAS 69 (87)
Q Consensus 2 VmAPM~~~~~~dG~~t~~~i~yY~~R--AkG-aGLIIte~~~V~~~g~~~~~~~~i~~d~~i~~Lk~~~~~ 69 (87)
+++|+.+...+| .+..+.++-+.++ +.| -|+++.+.+. ....+..+|..+-++.+.+.
T Consensus 7 i~~a~vTPf~~d-~iD~~~l~~lv~~li~~Gv~gl~v~GttG---------E~~~Lt~~Er~~v~~~~~~~ 67 (292)
T 3daq_A 7 VGVALTTPFTNN-KVNLEALKAHVNFLLENNAQAIIVNGTTA---------ESPTLTTDEKELILKTVIDL 67 (292)
T ss_dssp EEEECCCCEETT-EECHHHHHHHHHHHHHTTCCEEEESSGGG---------TGGGSCHHHHHHHHHHHHHH
T ss_pred EEEeeecCcCCC-CcCHHHHHHHHHHHHHcCCCEEEECcccc---------ccccCCHHHHHHHHHHHHHH
Confidence 456777766666 7765555444444 246 5888887652 34557777777777766553
No 62
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=22.03 E-value=65 Score=22.30 Aligned_cols=22 Identities=9% Similarity=0.134 Sum_probs=15.9
Q ss_pred HHHHHhcc-CCcEEEecccccCC
Q 048070 22 LYYSQRTI-NGGFLIAEATGVSD 43 (87)
Q Consensus 22 ~yY~~RAk-GaGLIIte~~~V~~ 43 (87)
+++...++ |+|+++++.+.+++
T Consensus 27 ~~~~~~~~~G~g~i~~~~v~~~~ 49 (311)
T 1jub_A 27 EDLEELKASQAGAYITKSSTLEK 49 (311)
T ss_dssp HHHHHHHHSSCSCCBCCCBCSSC
T ss_pred HHHHHHHHCCCCEEEeCccCCcc
Confidence 44544455 58999999988776
No 63
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=21.95 E-value=63 Score=22.13 Aligned_cols=15 Identities=20% Similarity=0.253 Sum_probs=11.5
Q ss_pred CCcEEEecccccCCC
Q 048070 30 NGGFLIAEATGVSDT 44 (87)
Q Consensus 30 GaGLIIte~~~V~~~ 44 (87)
|.|+++++++.+.|.
T Consensus 41 g~G~~~~~si~~~p~ 55 (311)
T 1ep3_A 41 KLGSIMVKATTLHPR 55 (311)
T ss_dssp GSSCEEEEEECSSCB
T ss_pred CCCEEEeCeeccCcc
Confidence 578999998876654
No 64
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=21.89 E-value=1.1e+02 Score=21.77 Aligned_cols=20 Identities=20% Similarity=0.394 Sum_probs=14.3
Q ss_pred HHHhhHHHhhhcCeeEEEEe
Q 048070 58 ARLWYLYWVFASPFGIMIIV 77 (87)
Q Consensus 58 ~~i~~Lk~~~~~~~~~~~~~ 77 (87)
+.+..++++...|||+-+++
T Consensus 52 ~~i~~~~~~~~~p~gVnl~~ 71 (369)
T 3bw2_A 52 QEIKRLRGLTGRPFGVNVFM 71 (369)
T ss_dssp HHHHHHHHHCCSCEEEEEEC
T ss_pred HHHHHHHHhCCCCeEEEEec
Confidence 45666677777899987665
Done!