BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048074
(233 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9NCL8|PITP1_DICDI Phosphatidylinositol transfer protein 1 OS=Dictyostelium discoideum
GN=pitA PE=1 SV=1
Length = 264
Score = 184 bits (466), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 96/237 (40%), Positives = 143/237 (60%), Gaps = 22/237 (9%)
Query: 3 QQNSNGDEGVDVLENRPF---EHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEE 59
Q+ SNG EGV+VL N P+ EH+ GQYT K+Y S+ P W++ P+ AL + E+
Sbjct: 31 QETSNG-EGVEVLVNEPYKEPEHE----GQYTHKIYHLGSRLPGWIRALIPSSALKLEEK 85
Query: 60 AWNSYPRCKTVSNTFIDLFLQCPYF-TKFSLTIETVHKADNGRSDNVHNLSEEQLAARQV 118
AWN+YP CKTV L+ P+ KF+ IE+ H DN +++N+HNLSE++L R V
Sbjct: 86 AWNAYPYCKTV--------LKSPFLGEKFTFIIESRHAQDNCKTENIHNLSEKELKERTV 137
Query: 119 EVLDIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSE-GWQDRCN-PVMTAYKLVTID 176
EV+DI +D +Y D +K +S++ RGPL E W++ P+MT YKLVT++
Sbjct: 138 EVIDITKPIKDPKNY---KETEDPTKIRSEKANRGPLEEEKWRESTEMPIMTCYKLVTVE 194
Query: 177 APYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSLNE 233
Y+GF ++E ++ E LF + HR + W+DEWFGM+M +R E ++ L +
Sbjct: 195 FKYFGFQTKVENFMMGIEFDLFTKFHRQVYCWLDEWFGMSMDDVRAFELKTKEDLKK 251
>sp|P48738|PIPNA_RABIT Phosphatidylinositol transfer protein alpha isoform OS=Oryctolagus
cuniculus GN=PITPNA PE=3 SV=2
Length = 270
Score = 168 bits (426), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/242 (40%), Positives = 133/242 (54%), Gaps = 27/242 (11%)
Query: 3 QQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWN 62
+ + G EGV+VL N P+E D RGQYT K+Y QSK P +++ AP AL +HE+AWN
Sbjct: 31 KNETGGGEGVEVLVNEPYEKD-GERGQYTHKIYHLQSKVPTFVRMLAPEGALNIHEKAWN 89
Query: 63 SYPRCKTV-SNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVL 121
+YP C+TV +N ++ F + IET HK D G +NVH L E +V +
Sbjct: 90 AYPYCRTVITNEYMK--------EDFLIKIETWHKPDLGTQENVHKLEPETWKHVEVIYI 141
Query: 122 DIAS----TARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGW------QDRCNPVMTAYK 171
DIA ++DY D +KFKS +TGRGPL W Q C P M AYK
Sbjct: 142 DIADRSQVLSKDY------KAEEDPAKFKSIKTGRGPLGPNWKQELVNQKDC-PYMCAYK 194
Query: 172 LVTIDAPYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSL 231
LVT+ +WG ++E + ER LF HR F W+D+W +TM IR +E+++ L
Sbjct: 195 LVTVKFKWWGLQNKVENFIHKQERRLFTNFHRQLFCWLDKWVDLTMDDIRRMEEETKRQL 254
Query: 232 NE 233
+E
Sbjct: 255 DE 256
>sp|P53810|PIPNA_MOUSE Phosphatidylinositol transfer protein alpha isoform OS=Mus musculus
GN=Pitpna PE=1 SV=2
Length = 271
Score = 167 bits (424), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 94/242 (38%), Positives = 132/242 (54%), Gaps = 26/242 (10%)
Query: 3 QQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWN 62
+ + G EGV+VL N P+E D +GQYT K+Y QSK P +++ AP AL +HE+AWN
Sbjct: 31 KNETGGGEGVEVLVNEPYEKDDGEKGQYTHKIYHLQSKVPTFVRMLAPEGALNIHEKAWN 90
Query: 63 SYPRCKTV-SNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVL 121
+YP C+TV +N ++ F + IET HK D G +NVH L E + +
Sbjct: 91 AYPYCRTVITNEYMK--------EDFLIKIETWHKPDLGTQENVHKLEPEAWKHVEAIYI 142
Query: 122 DIAS----TARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGW------QDRCNPVMTAYK 171
DIA ++DY D +KFKS +TGRGPL W Q C P M AYK
Sbjct: 143 DIADRSQVLSKDY------KAEEDPAKFKSVKTGRGPLGPNWKQELVNQKDC-PYMCAYK 195
Query: 172 LVTIDAPYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSL 231
LVT+ +WG ++E + E+ LF HR F W+D+W +TM IR +E+++ L
Sbjct: 196 LVTVKFKWWGLQNKVENFIHKQEKRLFTNFHRQLFCWLDKWVDLTMDDIRRMEEETKRQL 255
Query: 232 NE 233
+E
Sbjct: 256 DE 257
>sp|P16446|PIPNA_RAT Phosphatidylinositol transfer protein alpha isoform OS=Rattus
norvegicus GN=Pitpna PE=1 SV=2
Length = 271
Score = 167 bits (424), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 94/242 (38%), Positives = 132/242 (54%), Gaps = 26/242 (10%)
Query: 3 QQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWN 62
+ + G EGV+VL N P+E D +GQYT K+Y QSK P +++ AP AL +HE+AWN
Sbjct: 31 KNETGGGEGVEVLVNEPYEKDDGEKGQYTHKIYHLQSKVPTFVRMLAPEGALNIHEKAWN 90
Query: 63 SYPRCKTV-SNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVL 121
+YP C+TV +N ++ F + IET HK D G +NVH L E + +
Sbjct: 91 AYPYCRTVITNEYMK--------EDFLIKIETWHKPDLGTQENVHKLEPEAWKHVEAIYI 142
Query: 122 DIAS----TARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGW------QDRCNPVMTAYK 171
DIA ++DY D +KFKS +TGRGPL W Q C P M AYK
Sbjct: 143 DIADRSQVLSKDY------KAEEDPAKFKSIKTGRGPLGPNWKQELVNQKDC-PYMCAYK 195
Query: 172 LVTIDAPYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSL 231
LVT+ +WG ++E + E+ LF HR F W+D+W +TM IR +E+++ L
Sbjct: 196 LVTVKFKWWGLQNKVENFIHKQEKRLFTNFHRQLFCWLDKWVDLTMDDIRRMEEETKRQL 255
Query: 232 NE 233
+E
Sbjct: 256 DE 257
>sp|Q00169|PIPNA_HUMAN Phosphatidylinositol transfer protein alpha isoform OS=Homo sapiens
GN=PITPNA PE=1 SV=2
Length = 270
Score = 166 bits (419), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/242 (39%), Positives = 132/242 (54%), Gaps = 27/242 (11%)
Query: 3 QQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWN 62
+ + G EGV+VL N P+E D +GQYT K+Y QSK P +++ AP AL +HE+AWN
Sbjct: 31 KNETGGGEGVEVLVNEPYEKD-GEKGQYTHKIYHLQSKVPTFVRMLAPEGALNIHEKAWN 89
Query: 63 SYPRCKTV-SNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVL 121
+YP C+TV +N ++ F + IET HK D G +NVH L E + +
Sbjct: 90 AYPYCRTVITNEYMK--------EDFLIKIETWHKPDLGTQENVHKLEPEAWKHVEAVYI 141
Query: 122 DIAS----TARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGW------QDRCNPVMTAYK 171
DIA ++DY D +KFKS +TGRGPL W Q C P M AYK
Sbjct: 142 DIADRSQVLSKDY------KAEEDPAKFKSIKTGRGPLGPNWKQELVNQKDC-PYMCAYK 194
Query: 172 LVTIDAPYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSL 231
LVT+ +WG ++E + ER LF HR F W+D+W +TM IR +E+++ L
Sbjct: 195 LVTVKFKWWGLQNKVENFIHKQERRLFTNFHRQLFCWLDKWVDLTMDDIRRMEEETKRQL 254
Query: 232 NE 233
+E
Sbjct: 255 DE 256
>sp|Q2HJ54|PIPNA_BOVIN Phosphatidylinositol transfer protein alpha isoform OS=Bos taurus
GN=PITPNA PE=1 SV=3
Length = 270
Score = 164 bits (416), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 95/242 (39%), Positives = 132/242 (54%), Gaps = 27/242 (11%)
Query: 3 QQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWN 62
+ + G EGV+VL N P+E D +GQYT K+Y QSK P +++ AP AL +HE+AWN
Sbjct: 31 KNETGGGEGVEVLVNEPYEKD-GEKGQYTHKIYHLQSKVPTFVRMLAPEGALNIHEKAWN 89
Query: 63 SYPRCKTV-SNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVL 121
+YP C+TV +N ++ F + IET HK D G +NVH L E +V +
Sbjct: 90 AYPYCRTVITNEYMK--------EDFLIKIETWHKPDLGTLENVHKLEPEAWKHVEVIYI 141
Query: 122 DIAS----TARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGW------QDRCNPVMTAYK 171
DIA ++DY D +K+KS +TGRGPL W Q C P M AYK
Sbjct: 142 DIADRSQVLSKDY------KAEEDPAKYKSIKTGRGPLGPNWKQELVNQKDC-PYMCAYK 194
Query: 172 LVTIDAPYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSL 231
LVT+ +WG ++E + ER LF HR F W+D+W +TM IR +E ++ L
Sbjct: 195 LVTVKFKWWGLQNKVENFIHKQERRLFTNFHRQLFCWLDKWVDLTMDDIRRMEDETKRQL 254
Query: 232 NE 233
+E
Sbjct: 255 DE 256
>sp|Q9NCL7|PITP2_DICDI Phosphatidylinositol transfer protein 2 OS=Dictyostelium discoideum
GN=pitB PE=2 SV=1
Length = 259
Score = 162 bits (411), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 86/233 (36%), Positives = 136/233 (58%), Gaps = 19/233 (8%)
Query: 3 QQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWN 62
++++ G EG+++++N PF+++ G+GQYT K+ + P + P+ AL + E+AWN
Sbjct: 30 KESTKGGEGIEIIKNEPFDNEK-GKGQYTEKIIYLANSLPRFAAAILPSSALKIEEKAWN 88
Query: 63 SYPRCKTVSNTFIDLFLQCPYF-TKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVL 121
+YP CKT + CP+F K L+IE++H G +N E L R V+ +
Sbjct: 89 AYPYCKTEYS--------CPFFGEKLVLSIESMHLPGRGEVENALKCDAETLKQRHVDFI 140
Query: 122 DIAS-TARDYWSYAIASNNVDFSKFKSKRTGRGPLSE-GWQDRCNPVMTAYKLVTIDAPY 179
DIA+ ++Y D FKS +T RGPL + W+D+ PVMT YKLV + Y
Sbjct: 141 DIANDQPKEY------IKEEDPKIFKSVKTERGPLDDPKWRDKVEPVMTCYKLVHAEFKY 194
Query: 180 WGFGYRLEQALL-AGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSL 231
WGF ++E + G R + L++HR F WIDEWFG+T++ IR+IE+++ + L
Sbjct: 195 WGFQTKVENVIQDTGVRDVLLKAHRALFCWIDEWFGLTIEDIRKIEEETKAEL 247
>sp|Q6ZPQ6|PITM2_MOUSE Membrane-associated phosphatidylinositol transfer protein 2 OS=Mus
musculus GN=Pitpnm2 PE=1 SV=2
Length = 1335
Score = 158 bits (399), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 83/221 (37%), Positives = 125/221 (56%), Gaps = 16/221 (7%)
Query: 11 GVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWNSYPRCKTV 70
GV++LENRP+ G GQYT KVY P W ++ P AL + EE+WN+YP +T
Sbjct: 39 GVEILENRPYTDGPGGSGQYTHKVYHVGMHIPGWFRSILPKAALRVVEESWNAYPYTRT- 97
Query: 71 SNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVLDIASTARDY 130
CP+ KFS+ IET +K D G ++NV NLS + + +++DI +D
Sbjct: 98 -------RFTCPFVEKFSIDIETFYKTDTGENNNVFNLSPVEKSQLITDIIDI---VKDP 147
Query: 131 WSYAIASNNVDFSKFKSKRTGRGPLSEGW----QDRCNPVMTAYKLVTIDAPYWGFGYRL 186
+ D F+S +T RGPLSE W + R P+M AYKL ++ YWG ++
Sbjct: 148 VPPSEYKTEEDPKLFQSVKTCRGPLSENWIQEYKKRLLPIMCAYKLCKVEFRYWGMQSKI 207
Query: 187 EQALL-AGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQ 226
E+ + G R + + +HR + W DEW+G+TM++IRE+E++
Sbjct: 208 ERFIHDTGLRRVMVRAHRQAWCWQDEWYGLTMEKIRELERE 248
>sp|P53812|PIPNB_RAT Phosphatidylinositol transfer protein beta isoform OS=Rattus
norvegicus GN=Pitpnb PE=1 SV=2
Length = 271
Score = 157 bits (397), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 129/235 (54%), Gaps = 17/235 (7%)
Query: 3 QQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWN 62
+ + G EG++VL+N P+E+D +GQYT K+Y +SK PA+++ AP +LV HE+AWN
Sbjct: 31 KNETGGGEGIEVLKNEPYEND-GEKGQYTHKIYHLKSKVPAFVRMIAPEGSLVFHEKAWN 89
Query: 63 SYPRCKT-VSNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVL 121
+YP C+T V+N ++ F + IET HK D G +NVH L ++ +
Sbjct: 90 AYPYCRTIVTNEYMK--------DDFFIKIETWHKPDLGTLENVHGLDPNTWKTVEIVHI 141
Query: 122 DIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGWQDRCN-----PVMTAYKLVTID 176
DIA R A + D + F+S +T RGPL W+ P M AYKLVTI
Sbjct: 142 DIAD--RSQVEPADYKADEDPALFQSVKTKRGPLGPNWKKELANTPDCPKMCAYKLVTIK 199
Query: 177 APYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSL 231
+WG ++E + E+ +F HR F WID+W +TM+ IR +E ++ L
Sbjct: 200 FKWWGLQSKVENFIQKQEKRIFTNLHRQLFCWIDKWIDLTMEDIRRMEDETQKEL 254
>sp|P43125|RDGB_DROME Protein retinal degeneration B OS=Drosophila melanogaster GN=rdgB
PE=1 SV=2
Length = 1259
Score = 157 bits (396), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 90/245 (36%), Positives = 130/245 (53%), Gaps = 27/245 (11%)
Query: 3 QQNSNGD-EGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAW 61
++ S+G+ GV+++ N P++ G GQYT K+Y + P W+K+ P AL + EEAW
Sbjct: 30 REESHGEGSGVEIIINEPYKDGPGGNGQYTKKIYHVGNHLPGWIKSLLPKSALTVEEEAW 89
Query: 62 NSYPRCKTVSNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVL 121
N+YP +T CP+ KFSL IET + DNG DNV LS L R V+V+
Sbjct: 90 NAYPYTRT--------RYTCPFVEKFSLDIETYYYPDNGYQDNVFQLSGSDLRNRIVDVI 141
Query: 122 DIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGWQD--------------RCNPVM 167
DI W D F S +TGRGPL+E W + R +M
Sbjct: 142 DIVKD--QLWGGDYVKEE-DPKHFVSDKTGRGPLAEDWLEEYWREVKGKKQPTPRNMSLM 198
Query: 168 TAYKLVTIDAPYWGFGYRLEQALL-AGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQ 226
TAYK+ ++ YWG +LE+ + R + L +HR + W DEWFG+T++ IRE+E+Q
Sbjct: 199 TAYKICRVEFRYWGMQTKLEKFIHDVALRKMMLRAHRQAWAWQDEWFGLTIEDIRELERQ 258
Query: 227 SGSSL 231
+ +L
Sbjct: 259 TQLAL 263
>sp|Q9TR36|PIPNB_BOVIN Phosphatidylinositol transfer protein beta isoform OS=Bos taurus
GN=PITPNB PE=1 SV=3
Length = 271
Score = 156 bits (394), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 128/235 (54%), Gaps = 17/235 (7%)
Query: 3 QQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWN 62
+ + G EG++VL+N P+E D +GQYT K+Y +SK PA+++ AP +LV HE+AWN
Sbjct: 31 KNETGGGEGIEVLKNEPYEKD-GEKGQYTHKIYHLKSKVPAFVRMIAPEGSLVFHEKAWN 89
Query: 63 SYPRCKT-VSNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVL 121
+YP C+T V+N ++ F + IET HK D G +NVH L ++ +
Sbjct: 90 AYPYCRTIVTNEYMK--------DDFFIKIETWHKPDLGTLENVHGLDPNTWKTVEIVHI 141
Query: 122 DIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGWQDRCN-----PVMTAYKLVTID 176
DIA R A + D + F+S +T RGPL W+ P M AYKLVTI
Sbjct: 142 DIAD--RSQVEPADYKADEDPALFQSVKTKRGPLGPNWKKELANNPDCPQMCAYKLVTIK 199
Query: 177 APYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSL 231
+WG ++E + E+ +F HR F WID+W +TM+ IR +E ++ L
Sbjct: 200 FKWWGLQSKVENFIQKQEKRIFTNFHRQLFCWIDKWIDLTMEDIRRMEDETQKEL 254
>sp|P53811|PIPNB_MOUSE Phosphatidylinositol transfer protein beta isoform OS=Mus musculus
GN=Pitpnb PE=1 SV=2
Length = 271
Score = 156 bits (394), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 128/235 (54%), Gaps = 17/235 (7%)
Query: 3 QQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWN 62
+ + G EG++VL+N P+E+D +GQYT K+Y +SK PA+++ AP +LV HE+AWN
Sbjct: 31 KNETGGGEGIEVLKNEPYEND-GEKGQYTHKIYHLKSKVPAFVRMIAPEGSLVFHEKAWN 89
Query: 63 SYPRCKT-VSNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVL 121
+YP C+T V+N ++ F + IET HK D G +NVH L ++ +
Sbjct: 90 AYPYCRTIVTNEYMK--------DDFFIKIETWHKPDLGTLENVHGLDPNTWKTVEIVHI 141
Query: 122 DIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGWQDRCN-----PVMTAYKLVTID 176
DIA R A + D + F S +T RGPL W+ P M AYKLVTI
Sbjct: 142 DIAD--RSQVEPADYKADEDPALFHSVKTKRGPLGPNWKKELANTPDCPRMCAYKLVTIK 199
Query: 177 APYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSL 231
+WG ++E + E+ +F HR F WID+W +TM+ IR +E ++ L
Sbjct: 200 FKWWGLQSKVENFIQKQEKRIFTNLHRQLFCWIDKWIDLTMEDIRRMEDETQKEL 254
>sp|P48739|PIPNB_HUMAN Phosphatidylinositol transfer protein beta isoform OS=Homo sapiens
GN=PITPNB PE=1 SV=2
Length = 271
Score = 156 bits (394), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 128/235 (54%), Gaps = 17/235 (7%)
Query: 3 QQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWN 62
+ + G EG++VL+N P+E D +GQYT K+Y +SK PA+++ AP +LV HE+AWN
Sbjct: 31 KNETGGGEGIEVLKNEPYEKD-GEKGQYTHKIYHLKSKVPAFVRMIAPEGSLVFHEKAWN 89
Query: 63 SYPRCKT-VSNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVL 121
+YP C+T V+N ++ F + IET HK D G +NVH L ++ +
Sbjct: 90 AYPYCRTIVTNEYMK--------DDFFIKIETWHKPDLGTLENVHGLDPNTWKTVEIVHI 141
Query: 122 DIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGWQDRCN-----PVMTAYKLVTID 176
DIA R A + D + F+S +T RGPL W+ P M AYKLVTI
Sbjct: 142 DIAD--RSQVEPADYKADEDPALFQSVKTKRGPLGPNWKKELANSPDCPQMCAYKLVTIK 199
Query: 177 APYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSL 231
+WG ++E + E+ +F HR F WID+W +TM+ IR +E ++ L
Sbjct: 200 FKWWGLQSKVENFIQKQEKRIFTNFHRQLFCWIDKWIDLTMEDIRRMEDETQKEL 254
>sp|Q5R6F0|PIPNB_PONAB Phosphatidylinositol transfer protein beta isoform OS=Pongo abelii
GN=PITPNB PE=2 SV=3
Length = 272
Score = 154 bits (390), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/234 (36%), Positives = 126/234 (53%), Gaps = 15/234 (6%)
Query: 3 QQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWN 62
+ + G EG++VL+N P+E D +GQYT K+Y +SK PA+++ AP +LV HE+AWN
Sbjct: 31 KNETGGGEGIEVLKNEPYEKD-GEKGQYTHKIYHLKSKVPAFVRMIAPEGSLVFHEKAWN 89
Query: 63 SYPRCKTVSNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVLD 122
+YP C+T+ +C F + IET HK D G +NVH L ++ +D
Sbjct: 90 AYPYCRTIVTN------EC-MKDDFFIKIETWHKPDLGTLENVHGLDPNTWKTVEIVHID 142
Query: 123 IASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGWQDRCN-----PVMTAYKLVTIDA 177
IA R A + D + F+S +T RGPL W+ P M AYKLVTI
Sbjct: 143 IAD--RSQVEPADYKADEDPALFQSVKTKRGPLGPNWKKELANSPDCPQMCAYKLVTIKF 200
Query: 178 PYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSL 231
+WG ++E + E+ +F HR F WID+W +TM+ IR +E ++ L
Sbjct: 201 KWWGLQSKVENFIQKQEKRIFTNFHRQLFCWIDKWIDLTMEDIRRMEDETQKEL 254
>sp|Q54D93|PITP4_DICDI Phosphatidylinositol transfer protein 4 OS=Dictyostelium discoideum
GN=pitD PE=3 SV=2
Length = 331
Score = 152 bits (385), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/228 (37%), Positives = 123/228 (53%), Gaps = 14/228 (6%)
Query: 3 QQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWN 62
++SN + V +LE F +G +T KV+ + P + P AL + E++WN
Sbjct: 30 HESSNAGDNVQLLEKSSFTDKNGVKGTFTHKVFLLKKSLPRYASAILPKSALKIEEKSWN 89
Query: 63 SYPRCKTVSNTFIDLFLQCPYF-TKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVL 121
SYP KT+ CP+F KF L IE++HK +NV LS++ L R V+ +
Sbjct: 90 SYPNTKTI--------YSCPFFGEKFYLCIESIHKDGRDEEENVFGLSKDILKKRIVDHV 141
Query: 122 DIASTARDYWSYAIASNNVDFSKFKSKRTGRGPL-SEGWQDRCNPVMTAYKLVTIDAPYW 180
DI ARD + D FKSK TGRGPL S W+ NP M YKLVT++ YW
Sbjct: 142 DI---ARDEVEGKDVKTDEDPRMFKSKLTGRGPLTSPNWRKEVNPAMVVYKLVTVNFNYW 198
Query: 181 GFGYRLEQALLA-GERALFLESHRNCFGWIDEWFGMTMQQIREIEQQS 227
GF R+E + G R +FL++HR+ F W+DEW ++ +QI + EQ +
Sbjct: 199 GFQNRVENLVQTNGLREVFLKAHRSLFCWMDEWIDLSEEQIEQFEQST 246
>sp|O35954|PITM1_MOUSE Membrane-associated phosphatidylinositol transfer protein 1 OS=Mus
musculus GN=Pitpnm1 PE=1 SV=1
Length = 1243
Score = 152 bits (383), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 125/236 (52%), Gaps = 15/236 (6%)
Query: 2 QQQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAW 61
++++S GV++L NRP+ G GQYT KVY S P W + P AL + EE+W
Sbjct: 30 REESSGEGSGVEILANRPYTDGPGGNGQYTHKVYHVGSHIPGWFRALLPKAALQVEEESW 89
Query: 62 NSYPRCKTVSNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVL 121
N+YP +T CP+ KFS+ IET + D G+ NV NLS + R V+ +
Sbjct: 90 NAYPYTRT--------RYTCPFVEKFSIEIETYYLPDGGQQPNVFNLSGAERRQRIVDTI 141
Query: 122 DIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGW---QDRCNPVMTAYKLVTIDAP 178
DI RD + D ++S +TGRGPL++ W + P+M AYKL ++
Sbjct: 142 DI---VRDAVAPGEYKAEEDPRLYRSAKTGRGPLADDWARTAAQTGPLMCAYKLCKVEFR 198
Query: 179 YWGFGYRLEQALL-AGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSLNE 233
YWG ++EQ + G R + L +HR + W DEW ++M IR +E+++ L +
Sbjct: 199 YWGMQAKIEQFIHDVGLRRVMLRAHRQAWCWQDEWIELSMADIRALEEETARMLAQ 254
>sp|Q9BZ72|PITM2_HUMAN Membrane-associated phosphatidylinositol transfer protein 2 OS=Homo
sapiens GN=PITPNM2 PE=1 SV=1
Length = 1349
Score = 152 bits (383), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 123/222 (55%), Gaps = 16/222 (7%)
Query: 11 GVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWNSYPRCKTV 70
GV++LENRP+ G GQYT KVY P+W ++ P AL + EE+WN+YP +T
Sbjct: 39 GVEILENRPYTDGPGGSGQYTHKVYHVGMHIPSWFRSILPKAALRVVEESWNAYPYTRT- 97
Query: 71 SNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVLDIASTARDY 130
CP+ KFS+ IET +K D G + +V NLS + ++ +DI +
Sbjct: 98 -------RFTCPFVEKFSIDIETFYKTDAGENPDVFNLSPVEKNQLTIDFIDIVKDPVPH 150
Query: 131 WSYAIASNNVDFSKFKSKRTGRGPLSEGW----QDRCNPVMTAYKLVTIDAPYWGFGYRL 186
Y D F+S +T RGPLSE W + + P+M AYKL ++ YWG ++
Sbjct: 151 NEY---KTEEDPKLFQSTKTQRGPLSENWIEEYKKQVFPIMCAYKLCKVEFRYWGMQSKI 207
Query: 187 EQALL-AGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQS 227
E+ + G R + + +HR + W DEW+G++M+ IRE+E+++
Sbjct: 208 ERFIHDTGLRRVMVRAHRQAWCWQDEWYGLSMENIRELEKEA 249
>sp|Q5U2N3|PITM1_RAT Membrane-associated phosphatidylinositol transfer protein 1
OS=Rattus norvegicus GN=Pitpnm1 PE=2 SV=1
Length = 1242
Score = 151 bits (381), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 124/236 (52%), Gaps = 15/236 (6%)
Query: 2 QQQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAW 61
++++S GV++L NRP+ G GQYT KVY S P W + P AL + EE+W
Sbjct: 30 REESSGEGSGVEILANRPYTDGPGGNGQYTHKVYHVGSHIPGWFRALLPKAALQVEEESW 89
Query: 62 NSYPRCKTVSNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVL 121
N+YP +T CP+ KFS+ IET + D G+ NV NLS A R+ +L
Sbjct: 90 NAYPYTRT--------RYTCPFVEKFSIEIETYYLPDGGQQPNVFNLSG---AERRQRIL 138
Query: 122 DIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGW---QDRCNPVMTAYKLVTIDAP 178
D RD + D ++S +TGRGPL++ W + P+M AYKL ++
Sbjct: 139 DTIDIVRDAVAPGEYKAEEDPRLYRSVKTGRGPLADDWARTAAQTGPLMCAYKLCKVEFR 198
Query: 179 YWGFGYRLEQALL-AGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSLNE 233
YWG ++EQ + G R + L +HR + W DEW ++M IR +E+++ L +
Sbjct: 199 YWGMQAKIEQFIHDVGLRRVMLRAHRQAWCWQDEWIELSMADIRALEEETARMLAQ 254
>sp|O00562|PITM1_HUMAN Membrane-associated phosphatidylinositol transfer protein 1 OS=Homo
sapiens GN=PITPNM1 PE=1 SV=4
Length = 1244
Score = 150 bits (378), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 123/236 (52%), Gaps = 15/236 (6%)
Query: 2 QQQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAW 61
++++S GV++L NRP+ G GQYT KVY S P W + P AL + EE+W
Sbjct: 30 REESSGEGSGVEILANRPYTDGPGGSGQYTHKVYHVGSHIPGWFRALLPKAALQVEEESW 89
Query: 62 NSYPRCKTVSNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVL 121
N+YP +T CP+ KFS+ IET + D G+ NV NLS A R+ +L
Sbjct: 90 NAYPYTRT--------RYTCPFVEKFSIEIETYYLPDGGQQPNVFNLSG---AERRQRIL 138
Query: 122 DIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGW---QDRCNPVMTAYKLVTIDAP 178
D RD + D + S +TGRGPLS+ W + P+M AYKL ++
Sbjct: 139 DTIDIVRDAVAPGEYKAEEDPRLYHSVKTGRGPLSDDWARTAAQTGPLMCAYKLCKVEFR 198
Query: 179 YWGFGYRLEQALL-AGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSLNE 233
YWG ++EQ + G R + L +HR + W DEW ++M IR +E+++ L +
Sbjct: 199 YWGMQAKIEQFIHDVGLRRVMLRAHRQAWCWQDEWTELSMADIRALEEETARMLAQ 254
>sp|Q8K4R4|PITC1_MOUSE Cytoplasmic phosphatidylinositol transfer protein 1 OS=Mus musculus
GN=Pitpnc1 PE=1 SV=1
Length = 332
Score = 149 bits (376), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 124/231 (53%), Gaps = 13/231 (5%)
Query: 3 QQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWN 62
+ S+ EGV+V++N PFE G GQ+T K SK P+W + P + E+AWN
Sbjct: 30 HEQSDRGEGVEVVQNEPFEDPHHGNGQFTEKRVYLNSKLPSWARAVVPK-IFYVTEKAWN 88
Query: 63 SYPRCKTVSNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVLD 122
YP T C + KFS+ IET ++ + G +D++ + SE + R+V +D
Sbjct: 89 YYPYTITE--------YTCSFLPKFSIHIETKYEDNKGSNDSIFD-SEAKDLEREVCFID 139
Query: 123 IASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGWQDRCNPVMTAYKLVTIDAPYWGF 182
IA D + D FKS++TGRG L EGW+D P+M +YKLVT+ WG
Sbjct: 140 IAC---DEIPERYYKESEDPKHFKSEKTGRGQLREGWRDNHQPIMCSYKLVTVKFEVWGL 196
Query: 183 GYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSLNE 233
R+EQ + R + L HR F W+DEW+ MTM ++RE E+ + + N+
Sbjct: 197 QTRVEQFVHKVVRDILLIGHRQAFAWVDEWYDMTMDEVREFERATQEATNK 247
>sp|Q54VC7|PITP3_DICDI Phosphatidylinositol transfer protein 3 OS=Dictyostelium discoideum
GN=pitC PE=3 SV=1
Length = 287
Score = 149 bits (376), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 128/233 (54%), Gaps = 15/233 (6%)
Query: 1 MQQQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEA 60
+ ++N++ EG++V+EN+P+ D G +T K++ + P WL++FAP +L + E+A
Sbjct: 29 ISKKNTSLGEGIEVIENKPYA-DGATTGFFTRKIFHLGGRLPTWLRSFAPT-SLQIEEKA 86
Query: 61 WNSYPRCKTVSNTFIDLFLQCPYF-TKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVE 119
WN+YP CKT CP +FS++IET ++ D+G DN NL+ E+L+ R+VE
Sbjct: 87 WNAYPYCKTS--------YACPLLGDRFSVSIETRYEPDSGTQDNCLNLNSEELSIREVE 138
Query: 120 VLDIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGWQDRCNPVMTAYKLVTIDAPY 179
+DI + D Y D F+S +TGRG L W P+M YK+ ++
Sbjct: 139 HIDIVNDPIDEAHYKPEE---DPKIFQSVKTGRGKLQNDWMKSTKPIMCCYKVCKVEFRC 195
Query: 180 WGFGYRLEQAL-LAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSL 231
WG ++E + R F HR F WID+WF M M+ +RE E+++ +
Sbjct: 196 WGVQNKVENFIQRVALRDTFFMGHRQIFCWIDQWFDMDMESLREFEKKTNEEM 248
>sp|Q9UKF7|PITC1_HUMAN Cytoplasmic phosphatidylinositol transfer protein 1 OS=Homo sapiens
GN=PITPNC1 PE=1 SV=2
Length = 332
Score = 147 bits (371), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 122/231 (52%), Gaps = 13/231 (5%)
Query: 3 QQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWN 62
+ S+ EGV+V++N PFE G GQ+T K SK P+W + P + E+AWN
Sbjct: 30 HEQSDRGEGVEVVQNEPFEDPHHGNGQFTEKRVYLNSKLPSWARAVVPK-IFYVTEKAWN 88
Query: 63 SYPRCKTVSNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVLD 122
YP T C + KFS+ IET ++ + G +D + + +E + R+V +D
Sbjct: 89 YYPYTITE--------YTCSFLPKFSIHIETKYEDNKGSNDTIFD-NEAKDVEREVCFID 139
Query: 123 IASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGWQDRCNPVMTAYKLVTIDAPYWGF 182
IA D + D FKS++TGRG L EGW+D P+M +YKLVT+ WG
Sbjct: 140 IAC---DEIPERYYKESEDPKHFKSEKTGRGQLREGWRDSHQPIMCSYKLVTVKFEVWGL 196
Query: 183 GYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSLNE 233
R+EQ + R + L HR F W+DEW+ MTM +RE E+ + + N+
Sbjct: 197 QTRVEQFVHKVVRDILLIGHRQAFAWVDEWYDMTMDDVREFERATQEATNK 247
>sp|Q28CA0|PITC1_XENTR Cytoplasmic phosphatidylinositol transfer protein 1 OS=Xenopus
tropicalis GN=pitpnc1 PE=2 SV=1
Length = 329
Score = 144 bits (364), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/230 (35%), Positives = 121/230 (52%), Gaps = 13/230 (5%)
Query: 3 QQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWN 62
+ S EGV+V++N P+E V G+GQ T K SK P+W + P + E+AWN
Sbjct: 30 HEQSERGEGVEVVQNEPYEDPVHGQGQLTEKRVYLNSKLPSWARAVVPK-IFYVTEKAWN 88
Query: 63 SYPRCKTVSNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVLD 122
YP T C + KFS+ IET ++ + G +DN+ SE + A R++ +D
Sbjct: 89 YYPYTITEYT--------CSFLPKFSIHIETKYEDNKGSNDNIFE-SEAKDAEREICFVD 139
Query: 123 IASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGWQDRCNPVMTAYKLVTIDAPYWGF 182
IA D + D F S++TGRG L EGW++ P+M +YKLV + WG
Sbjct: 140 IAC---DEIPERYYKESEDPKNFVSEKTGRGQLKEGWREAQEPIMCSYKLVAVKFEVWGL 196
Query: 183 GYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSLN 232
R+EQ + R + L HR F W+DEW+ MTM ++RE E+ + + N
Sbjct: 197 QSRVEQFVHKVVRDILLIGHRQAFAWVDEWYDMTMDEVREYERTTQEATN 246
>sp|Q9U9P7|PITC1_DROME Cytoplasmic phosphatidylinositol transfer protein 1 OS=Drosophila
melanogaster GN=rdgBbeta PE=2 SV=1
Length = 273
Score = 142 bits (359), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 118/220 (53%), Gaps = 18/220 (8%)
Query: 17 NRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWNSYPRCKTVSNTFID 76
N+P E V G+GQYT K S+ P W++ P V+ E++WN YP T
Sbjct: 45 NKPCEDPVHGKGQYTEKHIHLSSRLPYWIQAICPRVFYVI-EKSWNYYPYTLTEYT---- 99
Query: 77 LFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVLDIA---STARDYWSY 133
C + K ++ I+T ++ +NG ++N +L+E++L R V+ LDIA +A+ Y
Sbjct: 100 ----CSFIPKLNVLIKTKYEDNNGSTENCLDLTEDELKVRTVDHLDIAFDEVSAKHY--- 152
Query: 134 AIASNNVDFSKFKSKRTGRGPLSEGWQDRCNPVMTAYKLVTIDAPYWGFGYRLEQALLAG 193
D FKS++T RGPL EGW++ P+M +YK+V WG ++E + G
Sbjct: 153 ---KKEEDPKFFKSEKTNRGPLIEGWRETDKPIMCSYKVVHASFEVWGLQTKVEDFIQRG 209
Query: 194 ERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSLNE 233
R + L HR F W+DEW GMT++ +R E+Q + NE
Sbjct: 210 IREILLLGHRQAFAWVDEWHGMTLEDVRAYERQKQAETNE 249
>sp|P45266|RADA_HAEIN DNA repair protein RadA homolog OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=radA PE=3 SV=1
Length = 458
Score = 33.1 bits (74), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 5/43 (11%)
Query: 190 LLAGE---RALFLESHRNCFGWIDEW--FGMTMQQIREIEQQS 227
LL GE R L SH+N FG ++E FGMT Q +RE++ S
Sbjct: 240 LLEGEADSRYRTLRSHKNRFGAVNELGVFGMTEQGLREVKNPS 282
>sp|P75910|YCDU_ECOLI Uncharacterized protein YcdU OS=Escherichia coli (strain K12)
GN=ycdU PE=4 SV=1
Length = 328
Score = 32.3 bits (72), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 11/75 (14%)
Query: 128 RDYWSYAIASNNVDFSKFKSKRTGRGPLSEGWQDRCNPVMTAY-KLVTIDAPYWGFGYRL 186
+ YW+Y + N+DFS FK K+ + L P++ + L+ + A WG L
Sbjct: 63 KAYWAYKCVTKNIDFSWFKKKQNHKIELFLT-----QPLVAGFLSLIMLSAMSWG----L 113
Query: 187 EQALLAGERALFLES 201
Q LL ALFL S
Sbjct: 114 YQ-LLPSLYALFLIS 127
>sp|A9KCQ4|SYL_COXBN Leucine--tRNA ligase OS=Coxiella burnetii (strain Dugway 5J108-111)
GN=leuS PE=3 SV=1
Length = 820
Score = 31.2 bits (69), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 180 WGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQS 227
WGF YR++ ALLA + + R+ + W T QQI E QQ+
Sbjct: 631 WGFSYRIKDALLAVNQ----QKERSNYQWEAPEHRQTRQQIHECLQQA 674
>sp|Q83DY1|SYL_COXBU Leucine--tRNA ligase OS=Coxiella burnetii (strain RSA 493 / Nine
Mile phase I) GN=leuS PE=3 SV=1
Length = 820
Score = 30.8 bits (68), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 180 WGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQS 227
WGF YR++ ALLA + + R+ + W T QQI E QQ+
Sbjct: 631 WGFSYRIKDALLAINQ----QKERSNYQWEAPEHRQTRQQIHECLQQA 674
>sp|A9NC49|SYL_COXBR Leucine--tRNA ligase OS=Coxiella burnetii (strain RSA 331 /
Henzerling II) GN=leuS PE=3 SV=1
Length = 820
Score = 30.8 bits (68), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 180 WGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSL 231
WGF YR++ ALLA + + R+ + W T QQI E QQ+ +
Sbjct: 631 WGFSYRIKDALLAINQ----QKERSNYQWEAPEHRQTRQQIHECLQQANIDM 678
>sp|B6J1B2|SYL_COXB2 Leucine--tRNA ligase OS=Coxiella burnetii (strain CbuG_Q212)
GN=leuS PE=3 SV=1
Length = 820
Score = 30.8 bits (68), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 180 WGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQS 227
WGF YR++ ALLA + + R+ + W T QQI E QQ+
Sbjct: 631 WGFSYRIKDALLAINQ----QKERSNYQWEAPEHRQTRQQIHECLQQA 674
>sp|B6J863|SYL_COXB1 Leucine--tRNA ligase OS=Coxiella burnetii (strain CbuK_Q154)
GN=leuS PE=3 SV=1
Length = 820
Score = 30.8 bits (68), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 180 WGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQS 227
WGF YR++ ALLA + + R+ + W T QQI E QQ+
Sbjct: 631 WGFSYRIKDALLAINQ----QKERSNYQWEAPEHRQTRQQIHECLQQA 674
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,427,723
Number of Sequences: 539616
Number of extensions: 3304029
Number of successful extensions: 6502
Number of sequences better than 100.0: 36
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 6391
Number of HSP's gapped (non-prelim): 36
length of query: 233
length of database: 191,569,459
effective HSP length: 114
effective length of query: 119
effective length of database: 130,053,235
effective search space: 15476334965
effective search space used: 15476334965
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)