BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048078
(378 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q65JS5|FMT_BACLD Methionyl-tRNA formyltransferase OS=Bacillus licheniformis (strain
DSM 13 / ATCC 14580) GN=fmt PE=3 SV=1
Length = 316
Score = 193 bits (490), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 118/319 (36%), Positives = 175/319 (54%), Gaps = 22/319 (6%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
+VF+G+P SV VL L D +EV +VTQP + R + + P PV + AL RG
Sbjct: 4 IVFMGTPDFSVPVLGTLI------DDGYEVVGVVTQPDRPKGRKKVMTPPPVKEEALRRG 57
Query: 112 FPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPL 171
P + PE+ E+A + AL+P+L +TAA+G ILP K L+ P G +N+H SLLP
Sbjct: 58 IP---VLQPEKVREEAETDKILALEPDLIVTAAFGQILPKKLLDYPKYGCINVHASLLPE 114
Query: 172 YRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGS 231
RG AP+ A+ G ++TGV++ + V LDAG ++A+ ++++++ L L G+
Sbjct: 115 LRGGAPIHYAILEGKEKTGVTIMYMVEKLDAGDMLAKVEVDIEETDNVGTLHDKLSKAGA 174
Query: 232 ELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAGWP 291
LL +P I+DGS V + QD+ KAT AP I E+ + + + VL+N+VR WP
Sbjct: 175 ALLSETVPRIIDGS--VTPEKQDEQKATYAPNIKREQELIDWSKPGEVLYNQVRGLNPWP 232
Query: 292 GTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDGI-TFKKDALVVPCGECTALEV 350
+ NGQ LK+ + C ++ E I T +KD +VV G TAL++
Sbjct: 233 VAYTVL------NGQT----LKVWAAKKCQALKQAEPGEIVTVEKDGIVVATGNDTALKL 282
Query: 351 LEVQLPGKKAVSAAAFWNG 369
EVQ GKK + A F G
Sbjct: 283 TEVQPAGKKRMKAEDFVRG 301
>sp|C5CG19|FMT_KOSOT Methionyl-tRNA formyltransferase OS=Kosmotoga olearia (strain TBF
19.5.1) GN=fmt PE=3 SV=1
Length = 311
Score = 181 bits (459), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 112/325 (34%), Positives = 175/325 (53%), Gaps = 29/325 (8%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
+VF+G+P + L L + V + +QP + RG+K++P+PV Q A + G
Sbjct: 3 IVFMGTPDFAAEHLRKLVEKK------YNVVGVFSQPDKPKGRGKKLIPTPVKQVAREYG 56
Query: 112 FPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPL 171
P +F P+ + L+ L+P++ IT AYG +L + +PP+G N+H SLLP
Sbjct: 57 IP---VFQPKSVNKGEGFEALKELKPDIIITVAYGKLLKQQVFELPPLGCYNVHASLLPK 113
Query: 172 YRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGS 231
YRGAAP+QRAL+ G KETG+++ +D+GP+ +E++E+ L L + G
Sbjct: 114 YRGAAPIQRALENGEKETGITIFKIDEGMDSGPIALQERIEISSDDNFGTLKKKLCNLGK 173
Query: 232 ELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWL-SFDEEAVVLHNKVRAFAGW 290
+LLI L I G +K PQD S+AT APKIT E++ L FD V NK+RA+
Sbjct: 174 KLLIEFLKKISAGE--IKLTPQDHSQATYAPKITKEDTILIEFDNGERVF-NKIRAYDPE 230
Query: 291 PGTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDG--ITFKKDALVVPCGECTAL 348
PG V R G+ + +K+ +C N + G I+ KD++VV C + A+
Sbjct: 231 PG-------VTTRLGE---LRVKLFGAGICDNCCVDAEPGQIISISKDSMVVACKK-GAV 279
Query: 349 EVLEVQLPGKKAVSAAAFWNGLRGQ 373
++ ++Q PGKK ++ W G+
Sbjct: 280 KISKIQFPGKKVITV---WQAKSGR 301
>sp|B9DPM5|FMT_STACT Methionyl-tRNA formyltransferase OS=Staphylococcus carnosus (strain
TM300) GN=fmt PE=3 SV=1
Length = 310
Score = 181 bits (459), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 177/329 (53%), Gaps = 26/329 (7%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
++F+G+P S VL+ L +V A+VTQP R R + P PV + AL+ G
Sbjct: 4 VIFMGTPDFSTKVLEMLIAEE-------DVIAVVTQPDRPVGRKRVMTPPPVKEVALENG 56
Query: 112 FPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPL 171
++ PE+ + L L ++P+L +TAA+G ILP L+ P +G +N+H SLLP
Sbjct: 57 IE---VYQPEKISQSDDLQTLIDMEPDLIVTAAFGQILPKSLLDAPKLGAINVHASLLPK 113
Query: 172 YRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGS 231
YRG AP+ +A+ G KETGV++ + LDAG +I+++ +E++ + L G+
Sbjct: 114 YRGGAPIHQAIIDGEKETGVTIMYMAPKLDAGDIISQQAIEIEANDNVESMHDKLSFLGA 173
Query: 232 ELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAGWP 291
+LL + LP I++G+ A QDD KAT A I+ E+ + + + A ++N +R + WP
Sbjct: 174 DLLKKTLPEIINGTNDRIA--QDDDKATFASNISREDERIDWTQSAEQVYNHIRGLSPWP 231
Query: 292 GTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDGITFKKDALVVPCGECTALEVL 351
K+ DD N +K+ R+ + N + + K A++V G A+ +
Sbjct: 232 VAYTKL---DDTN-------MKLYAARIEEGKKGNPGEILETTKKAIIVGTGSDDAIALT 281
Query: 352 EVQLPGKKAVSAAAFWNG----LRGQKLK 376
E+QL GKK + A F +G L G++LK
Sbjct: 282 EIQLSGKKRMPTANFLSGYQEDLVGKELK 310
>sp|B5YF45|FMT_DICT6 Methionyl-tRNA formyltransferase OS=Dictyoglomus thermophilum
(strain ATCC 35947 / DSM 3960 / H-6-12) GN=fmt PE=3 SV=1
Length = 312
Score = 177 bits (450), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 110/325 (33%), Positives = 180/325 (55%), Gaps = 28/325 (8%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
+++ G+P+ S +L+ +++ + IVTQP + RG+K+LPSPV Q+A+++G
Sbjct: 3 VIYFGTPEFSRIILEKIYDH-------LNIIGIVTQPDKPKGRGKKILPSPVKQFAINKG 55
Query: 112 FPADLIFTPER-AGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLP 170
++ PE+ G F + ++ L+P+ I A+YG I+P LNIPP G +N+H S+LP
Sbjct: 56 I---TVYQPEKLKGNIEFFNIIKDLKPDALIVASYGKIIPEDILNIPPYGGINVHASILP 112
Query: 171 LYRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEG 230
YRGAAP++RAL KETGVS+ + LD GPV A +K+ + L + L + G
Sbjct: 113 KYRGAAPIERALMNCEKETGVSIMKMEKGLDTGPVYAIKKIPILPDDDKGTLSIKLANLG 172
Query: 231 SELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAGW 290
++LL+ LP I +G ++ PQD+S A+ APK+T EE ++++ + + ++RA +
Sbjct: 173 ADLLLEVLPLIKEG--KLIPVPQDESLASYAPKLTKEEEIINWNMDGEKICCQIRALSPE 230
Query: 291 PGT----RAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDGITFKKDALVVPCGECT 346
PG R K+ V N ++ + +I + I+ + GI K E
Sbjct: 231 PGAMTFFRGKILKVFKANFEKRFFDEDVINGTI---IEQDRKKGIGVKV--------ENG 279
Query: 347 ALEVLEVQLPGKKAVSAAAFWNGLR 371
L +LE+Q GKK ++ F NG R
Sbjct: 280 ILWLLELQPEGKKKMNFLEFMNGYR 304
>sp|B8E0X6|FMT_DICTD Methionyl-tRNA formyltransferase OS=Dictyoglomus turgidum (strain
Z-1310 / DSM 6724) GN=fmt PE=3 SV=1
Length = 314
Score = 177 bits (448), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/325 (34%), Positives = 177/325 (54%), Gaps = 28/325 (8%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
+++ G+P+ S +L+ + SP + A+VTQP + RG++++ SPV +A+ +G
Sbjct: 3 IIYFGTPEFSRIILERI-----SP--YLNIIAVVTQPDKPKGRGKRIMCSPVKDFAISKG 55
Query: 112 FPADLIFTPER-AGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLP 170
P ++ PE+ G F +R+L PE + A+YG I+P LNIPP G +N+H S+LP
Sbjct: 56 IP---VYQPEKLKGNKEFFEIIRSLNPEALVVASYGKIIPEDILNIPPYGGINVHASVLP 112
Query: 171 LYRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEG 230
YRGAAP++RA+ KETGVS+ R LD GPV A K+ + L + L G
Sbjct: 113 KYRGAAPIERAIMNCEKETGVSIMKMERGLDTGPVYAIRKIPILPDDNRGTLSIKLAHLG 172
Query: 231 SELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAGW 290
+ELL+ LP I DG ++ PQ++S AT APK++ EE + ++ + ++RA +
Sbjct: 173 AELLLEVLPLIKDG--KLSPVPQEESLATYAPKLSKEEEIIDWNMRGEKIWCQIRALSPE 230
Query: 291 PGT----RAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDGITFKKDALVVPCGECT 346
PG R K+ + + ++ I +II + I+ N+ GI K + +
Sbjct: 231 PGAMTFFRGKILKIFKADFEEKIFNEEIINGTI---IEQNKKRGIGVKVNNGI------- 280
Query: 347 ALEVLEVQLPGKKAVSAAAFWNGLR 371
L +LE+Q GKK +S F NG R
Sbjct: 281 -LWLLELQPEGKKRMSFLEFMNGYR 304
>sp|Q2RK24|FMT_MOOTA Methionyl-tRNA formyltransferase OS=Moorella thermoacetica (strain
ATCC 39073) GN=fmt PE=3 SV=1
Length = 311
Score = 176 bits (446), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 117/319 (36%), Positives = 169/319 (52%), Gaps = 23/319 (7%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
LVF+G+P +V L AL A E AA++TQP R RG+K+LP PV AL G
Sbjct: 3 LVFMGTPDFAVPSLQALVAAG------HEFAAVITQPDRPRGRGKKLLPPPVKSTALAAG 56
Query: 112 FPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPL 171
P + P + FL +LR LQPEL + A+G IL + L++P G VN+H SLLP
Sbjct: 57 LP---VRQPSDMKDREFLEDLRLLQPELIVVVAFGRILSREILDLPARGCVNLHASLLPR 113
Query: 172 YRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGS 231
YRGAAP+ RA+ G ETGV+ + LDAG +I +EK+ + + E+ L G+
Sbjct: 114 YRGAAPIHRAVMNGEVETGVTTMWMAPQLDAGDIILQEKLPIPPEATTGEIHDRLAEVGA 173
Query: 232 ELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAGWP 291
LL+ L I ++R PQD++ AT AP + EE + +++ A V++N++R WP
Sbjct: 174 GLLVHTLELI--AASRAPRLPQDEALATYAPPLKPEEEVIHWEQPAQVIYNQIRGLNPWP 231
Query: 292 GTRAKMAVVDDRNGQQSIVELKIITTRVC-PNIQTNEVDGITFKKDALVVPCGECTALEV 350
G R+G++ LKI R+ P+ + ++ VV G L V
Sbjct: 232 GAYTL------RSGER----LKIYGARLTDPSAIGRAGRVVEVGREGFVVQAGTGRLL-V 280
Query: 351 LEVQLPGKKAVSAAAFWNG 369
VQ PGKK + A+A+ G
Sbjct: 281 TSVQPPGKKIMPASAYLQG 299
>sp|Q0AXL4|FMT_SYNWW Methionyl-tRNA formyltransferase OS=Syntrophomonas wolfei subsp.
wolfei (strain Goettingen) GN=fmt PE=3 SV=1
Length = 314
Score = 176 bits (445), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/324 (34%), Positives = 175/324 (54%), Gaps = 30/324 (9%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVA----QYA 107
+VF+G+ ++ L AL + E+A +V+QP +R RGRKV P+PV QY
Sbjct: 3 IVFMGTSHFAIPSLKALIASE------HEIAGVVSQPDKQRGRGRKVTPTPVKEIAEQYK 56
Query: 108 LDRGFPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPS 167
L+ A+ I TPE + ++ +PEL I +YG I+P L P G +N+H S
Sbjct: 57 LELLQTAN-IKTPES------IKRIKQWKPELIIVVSYGQIIPLSILEYPRHGCINVHAS 109
Query: 168 LLPLYRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLF 227
LLP YRGAAPVQRAL G K +G+++ F LD G +I +E + VDD I EL +L
Sbjct: 110 LLPRYRGAAPVQRALMDGIKSSGITIMFMDEGLDTGDIIMQEAIAVDDNINHGELEKILA 169
Query: 228 SEGSELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAF 287
G++LL++ + ++ G ++ QDDS+A+ A +I+ E+ +++ E A +HN++RA
Sbjct: 170 DMGADLLLQVVDRLVQGE-KLPRVVQDDSQASYAARISKEDEIINWSEPAYAIHNRIRAL 228
Query: 288 AGWPGTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEV-DGITFKKDALVVPCGECT 346
PG + + NG ++KI ++V + + + I K+ V GE
Sbjct: 229 NPQPGAYSYI------NG----TKVKIFASKVRSEAGSGVIAEVIEVDKNTFQVQTGEGI 278
Query: 347 ALEVLEVQLPGKKAVSAAAFWNGL 370
LEVLE+Q GKK + + F G
Sbjct: 279 -LEVLEIQKAGKKRMPTSEFLKGF 301
>sp|B2V969|FMT_SULSY Methionyl-tRNA formyltransferase OS=Sulfurihydrogenibium sp.
(strain YO3AOP1) GN=fmt PE=3 SV=1
Length = 311
Score = 175 bits (444), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 111/330 (33%), Positives = 171/330 (51%), Gaps = 32/330 (9%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
++F G+P +V L AL ++ +V ++TQP R RG+K+ P+PV + AL
Sbjct: 3 VLFWGTPDFAVKSLKALIESN------HQVVGVITQPDKPRGRGQKIQPTPVKEEALKHN 56
Query: 112 FPADLIFTPER-AGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLP 170
P +F PE+ L ++ L P++ + AYG ILP + +NIP T+N+H SLLP
Sbjct: 57 IP---VFQPEKIKNNQEILETIKKLNPDISVVVAYGKILPEEIINIPKYKTINVHASLLP 113
Query: 171 LYRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEG 230
YRGAAP+QRA+ G +TGV + ++ LDAG V A ++E+ + L L EG
Sbjct: 114 EYRGAAPIQRAIMEGKDKTGVCIMEIIKELDAGDVYACREVEITEDDDIISLHDKLAEEG 173
Query: 231 SELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAGW 290
+ LLI+ L I G + +PQD KAT A I E + F A + N++RA W
Sbjct: 174 ARLLIKVLDKIEKGE--IDKKPQDHEKATYAKPIEKSEGKIDFSRSAKEIFNQIRALKVW 231
Query: 291 PGTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDGITFK---KDALVVPCGE-CT 346
P AK R+ + I++ KI+ + N + G K K+ +VV G+ C
Sbjct: 232 PKAYAKF-----RDEEVKILDAKIVECNL------NALPGEIIKADEKEGIVVKTGDGCL 280
Query: 347 ALEVLEVQLPGKKAVSAAAFWNGLRGQKLK 376
L++ +Q P K ++ + +RG K+K
Sbjct: 281 LLKI--IQFPNSKPITTQ---DAIRGYKIK 305
>sp|Q5FJH5|FMT_LACAC Methionyl-tRNA formyltransferase OS=Lactobacillus acidophilus
(strain ATCC 700396 / NCK56 / N2 / NCFM) GN=fmt PE=3
SV=1
Length = 314
Score = 175 bits (443), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 111/324 (34%), Positives = 168/324 (51%), Gaps = 22/324 (6%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
++F+G+P+ SV VL+ L A +E+ A+VTQP + R +K+ +P A
Sbjct: 4 VIFMGTPEFSVPVLEGLIEAG------YEIRAVVTQPDKKVGRKQKIAKTPAKIAAEKHD 57
Query: 112 FPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPL 171
P + P + ++ L + +L +TAAYG LP+KFL + VN+H SLLP
Sbjct: 58 LP---VLQPVKLSGSEEMNQLIDMHADLIVTAAYGQFLPTKFLKSVNIAAVNVHGSLLPK 114
Query: 172 YRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGS 231
YRG AP+Q +L G KETG+++ V+ +DAG + A+E ++++ + A L L G
Sbjct: 115 YRGGAPIQYSLINGDKETGITIMEMVKKMDAGDIYAQEAIKIEPEDNAGTLFSKLSILGR 174
Query: 232 ELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAGWP 291
+LL++ LPSI+DGS VK PQD K +P IT E+ LS D A +N +RA P
Sbjct: 175 DLLLKTLPSIIDGS--VKKTPQDPDKVVFSPNITKEQERLSIDMTAEQANNMIRALNPDP 232
Query: 292 GTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDGITFKKDALVVPCGECTALEVL 351
G + NGQ+ K+ V + + E + K + + T L +L
Sbjct: 233 GAYLMI------NGQR----FKVWEAEVASDSSSLEAGTVVANKGRFAISFADNTVLNLL 282
Query: 352 EVQLPGKKAVSAAAFWNGLRGQKL 375
EVQ GKK ++ F NG +G K
Sbjct: 283 EVQPSGKKRMNIKNFLNG-QGSKF 305
>sp|A1ALC4|FMT_PELPD Methionyl-tRNA formyltransferase OS=Pelobacter propionicus (strain
DSM 2379) GN=fmt PE=3 SV=1
Length = 319
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/326 (34%), Positives = 164/326 (50%), Gaps = 35/326 (10%)
Query: 50 KPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALD 109
+ +VF+G+P+ + L AL + + A+VTQP + RG K++P PV + AL
Sbjct: 4 RSIVFMGTPEFACPTLQALIDRGE------RLLAVVTQPDRPKGRGHKLMPPPVKELALA 57
Query: 110 RGFPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLL 169
P + P R AF+ ++R L PEL + A+G ILP L+IPP+G VN+H SLL
Sbjct: 58 HDIP---VLQPHRVRASAFVESIRQLAPELIVVVAFGQILPKALLDIPPLGCVNVHASLL 114
Query: 170 PLYRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSE 229
P YRGAAP+ + G ETGV+ LD GP++ + +D+ L + S
Sbjct: 115 PRYRGAAPLNWCIINGETETGVTTMLMDTGLDTGPMLLKRSTPIDENEDIVSLHDRMASL 174
Query: 230 GSELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAG 289
G+ELL L + +G R++ QPQ+DS + AP + E + + A +HN+VR A
Sbjct: 175 GAELLAETLDGLREG--RIEPQPQNDSLSCYAPLLKKEHGLIDWQRPARQIHNQVRGLAA 232
Query: 290 WPGTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDGITFKKDALVVPCGE----C 345
WPG + + NG LK+ TRV DG L G+ C
Sbjct: 233 WPGAQTLL------NGH----ALKLFRTRV--------ADGAGAPGTVLCSTGGQLEVAC 274
Query: 346 T--ALEVLEVQLPGKKAVSAAAFWNG 369
+L + E+QL GKK + +A+F G
Sbjct: 275 LDGSLLIQELQLAGKKRLDSASFLAG 300
>sp|Q603G2|FMT_METCA Methionyl-tRNA formyltransferase OS=Methylococcus capsulatus
(strain ATCC 33009 / NCIMB 11132 / Bath) GN=fmt PE=3
SV=1
Length = 308
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/329 (36%), Positives = 172/329 (52%), Gaps = 30/329 (9%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
+VF G+P+ +V L AL + P A+ TQP RGRK+ PSPV Q A++ G
Sbjct: 3 IVFAGTPEFAVPTLRALIASGHPP------CAVYTQPDRPAGRGRKIAPSPVKQLAIEHG 56
Query: 112 FPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPL 171
P +F P L AL+P+L + AYG ILP+ L +P G VNIH SLLP
Sbjct: 57 LP---VFQPASLKGPEERERLVALEPDLMVVVAYGLILPTPVLTVPRFGCVNIHASLLPR 113
Query: 172 YRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGS 231
+RGAAP+QRA+ G +ETGV+L LDAGP++ + + D L L G+
Sbjct: 114 WRGAAPIQRAILAGDRETGVTLMRIEPRLDAGPMLGKRSCSIGDDDTTASLHDRLAGLGA 173
Query: 232 ELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAGWP 291
E+LI LP + + R+ + QD+S+ T A KI E+ L + ++A L +VRAF WP
Sbjct: 174 EMLIELLPGL--AADRLTGEIQDESQVTYAEKIEKSEARLDWQKDATSLSRRVRAFNPWP 231
Query: 292 GTRAKMAVVDDRNGQQSIVELKIITTRV---CPNIQTNEVDGITFKKDALVVPCGECTAL 348
V + + ++ L+I + +V P+ + T D V CG AL
Sbjct: 232 --------VAETTLEGTV--LRIWSAQVLDPAPDAPPGSIIACTKNLD---VACGR-GAL 277
Query: 349 EVLEVQLPGKKAVSAAAFWN--GLRGQKL 375
+LEVQ PGK+ +SA F N L G++L
Sbjct: 278 RILEVQPPGKRRMSAKDFLNAHALAGKRL 306
>sp|Q5HPX5|FMT_STAEQ Methionyl-tRNA formyltransferase OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=fmt PE=3 SV=1
Length = 310
Score = 172 bits (436), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 99/320 (30%), Positives = 171/320 (53%), Gaps = 22/320 (6%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
++F+G+P S VL+ L + EV A+VTQP R + + P PV + A
Sbjct: 4 IIFMGTPDFSTKVLEMLI-------AEHEVIAVVTQPDRPVGRKKVMTPPPVKRVATKHQ 56
Query: 112 FPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPL 171
P ++ PE+ + L L +L+ +L +TAA+G +LP LN P +G +N+H SLLP
Sbjct: 57 IP---VYQPEKLKDSQELDVLLSLESDLIVTAAFGQLLPESLLNAPKLGAINVHASLLPK 113
Query: 172 YRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGS 231
YRG AP+ +A+ G +ETG+++ + V+ LDAG +I+++ + ++++ + L G+
Sbjct: 114 YRGGAPIHQAIIDGEEETGITIMYMVKKLDAGNIISQQSIRIEEEDNVGTMHDKLSFLGA 173
Query: 232 ELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAGWP 291
ELL + LPSI+D + + PQDD+ AT A I E+ + ++ A +HN +R + WP
Sbjct: 174 ELLKKTLPSIIDNTN--DSIPQDDALATFASNIRREDERIDWNMSAQAIHNHIRGLSPWP 231
Query: 292 GTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDGITFKKDALVVPCGECTALEVL 351
M +++N LK+ + + + N I K L++ G A+ +
Sbjct: 232 VAYTTM---NEKN-------LKLFSAFIVKGKKGNPGTIIEATKHELIIATGSDDAIALT 281
Query: 352 EVQLPGKKAVSAAAFWNGLR 371
E+Q GKK + + +G++
Sbjct: 282 EIQPAGKKRMKVTDYLSGVQ 301
>sp|Q2YXK0|FMT_STAAB Methionyl-tRNA formyltransferase OS=Staphylococcus aureus (strain
bovine RF122 / ET3-1) GN=fmt PE=3 SV=1
Length = 311
Score = 172 bits (435), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 182/332 (54%), Gaps = 33/332 (9%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
++F+G+P S VL+ L + +V A+VTQP R R + P PV + A+
Sbjct: 4 IIFMGTPDFSTTVLEMLI-------AEHDVIAVVTQPDRPVGRKRVMTPPPVKKVAMKYD 56
Query: 112 FPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPL 171
P ++ PE+ L L L +L +TAA+G +LP L +P +G +N+H SLLP
Sbjct: 57 LP---VYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALPKLGAINVHASLLPK 113
Query: 172 YRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGS 231
YRG AP+ +A+ G +ETG+++ + V+ LDAG +I+++ +++++ + L G+
Sbjct: 114 YRGGAPIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEENDNVGTMHDKLSVLGA 173
Query: 232 ELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAGWP 291
+LL LPSI++G+ ++ PQDD++AT A I E+ +S+++ + N++R + WP
Sbjct: 174 DLLKETLPSIIEGTN--ESVPQDDTQATFASNIRREDERISWNKPGRQVFNQIRGLSPWP 231
Query: 292 GTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDG----ITFKKDALVVPCGECTA 347
M DD N LKI + ++TN+++ I K A++V + A
Sbjct: 232 VAYTTM---DDTN-------LKIYDAEL---VETNKINEPGTIIETTKKAIIVATNDNEA 278
Query: 348 LEVLEVQLPGKKAVSAAAFWNG----LRGQKL 375
+ + ++QL GKK + AA + +G L G+KL
Sbjct: 279 VAIKDMQLAGKKRMLAANYLSGAQNILVGKKL 310
>sp|Q6GHL9|FMT_STAAR Methionyl-tRNA formyltransferase OS=Staphylococcus aureus (strain
MRSA252) GN=fmt PE=3 SV=1
Length = 311
Score = 172 bits (435), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 182/332 (54%), Gaps = 33/332 (9%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
++F+G+P S VL+ L + +V A+VTQP R R + P PV + A+
Sbjct: 4 IIFMGTPDFSTTVLEMLI-------AEHDVIAVVTQPDRPVGRKRVMTPPPVKKVAMKYD 56
Query: 112 FPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPL 171
P ++ PE+ L L L +L +TAA+G +LP L +P +G +N+H SLLP
Sbjct: 57 LP---VYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALPKLGAINVHASLLPK 113
Query: 172 YRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGS 231
YRG AP+ +A+ G +ETG+++ + V+ LDAG +I+++ +++++ + L G+
Sbjct: 114 YRGGAPIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEENDNVGTMHDKLSVLGA 173
Query: 232 ELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAGWP 291
+LL LPSI++G+ ++ PQDD++AT A I E+ +S+++ + N++R + WP
Sbjct: 174 DLLKETLPSIIEGTN--ESVPQDDTQATFASNIRREDERISWNKPGRQVFNQIRGLSPWP 231
Query: 292 GTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDG----ITFKKDALVVPCGECTA 347
M DD N LKI + ++TN+++ I K A++V + A
Sbjct: 232 VAYTTM---DDTN-------LKIYDAEL---VETNKINEPGTIIETTKKAIIVATNDNEA 278
Query: 348 LEVLEVQLPGKKAVSAAAFWNG----LRGQKL 375
+ + ++QL GKK + AA + +G L G+KL
Sbjct: 279 VAIKDMQLAGKKRMLAANYLSGAQNTLVGKKL 310
>sp|P99127|FMT_STAAN Methionyl-tRNA formyltransferase OS=Staphylococcus aureus (strain
N315) GN=fmt PE=1 SV=1
Length = 311
Score = 172 bits (435), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 182/332 (54%), Gaps = 33/332 (9%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
++F+G+P S VL+ L + +V A+VTQP R R + P PV + A+
Sbjct: 4 IIFMGTPDFSTTVLEMLI-------AEHDVIAVVTQPDRPVGRKRVMTPPPVKKVAMKYD 56
Query: 112 FPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPL 171
P ++ PE+ L L L +L +TAA+G +LP L +P +G +N+H SLLP
Sbjct: 57 LP---VYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALPKLGAINVHASLLPK 113
Query: 172 YRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGS 231
YRG AP+ +A+ G +ETG+++ + V+ LDAG +I+++ +++++ + L G+
Sbjct: 114 YRGGAPIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEENDNVGTMHDKLSVLGA 173
Query: 232 ELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAGWP 291
+LL LPSI++G+ ++ PQDD++AT A I E+ +S+++ + N++R + WP
Sbjct: 174 DLLKETLPSIIEGTN--ESVPQDDTQATFASNIRREDERISWNKPGRQVFNQIRGLSPWP 231
Query: 292 GTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDG----ITFKKDALVVPCGECTA 347
M DD N LKI + ++TN+++ I K A++V + A
Sbjct: 232 VAYTTM---DDTN-------LKIYDAEL---VETNKINEPGTIIETTKKAIIVATNDNEA 278
Query: 348 LEVLEVQLPGKKAVSAAAFWNG----LRGQKL 375
+ + ++QL GKK + AA + +G L G+KL
Sbjct: 279 VAIKDMQLAGKKRMLAANYLSGAQNTLVGKKL 310
>sp|P64136|FMT_STAAM Methionyl-tRNA formyltransferase OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=fmt PE=1 SV=1
Length = 311
Score = 172 bits (435), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 182/332 (54%), Gaps = 33/332 (9%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
++F+G+P S VL+ L + +V A+VTQP R R + P PV + A+
Sbjct: 4 IIFMGTPDFSTTVLEMLI-------AEHDVIAVVTQPDRPVGRKRVMTPPPVKKVAMKYD 56
Query: 112 FPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPL 171
P ++ PE+ L L L +L +TAA+G +LP L +P +G +N+H SLLP
Sbjct: 57 LP---VYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALPKLGAINVHASLLPK 113
Query: 172 YRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGS 231
YRG AP+ +A+ G +ETG+++ + V+ LDAG +I+++ +++++ + L G+
Sbjct: 114 YRGGAPIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEENDNVGTMHDKLSVLGA 173
Query: 232 ELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAGWP 291
+LL LPSI++G+ ++ PQDD++AT A I E+ +S+++ + N++R + WP
Sbjct: 174 DLLKETLPSIIEGTN--ESVPQDDTQATFASNIRREDERISWNKPGRQVFNQIRGLSPWP 231
Query: 292 GTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDG----ITFKKDALVVPCGECTA 347
M DD N LKI + ++TN+++ I K A++V + A
Sbjct: 232 VAYTTM---DDTN-------LKIYDAEL---VETNKINEPGTIIETTKKAIIVATNDNEA 278
Query: 348 LEVLEVQLPGKKAVSAAAFWNG----LRGQKL 375
+ + ++QL GKK + AA + +G L G+KL
Sbjct: 279 VAIKDMQLAGKKRMLAANYLSGAQNTLVGKKL 310
>sp|A5ISA1|FMT_STAA9 Methionyl-tRNA formyltransferase OS=Staphylococcus aureus (strain
JH9) GN=fmt PE=3 SV=1
Length = 311
Score = 172 bits (435), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 182/332 (54%), Gaps = 33/332 (9%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
++F+G+P S VL+ L + +V A+VTQP R R + P PV + A+
Sbjct: 4 IIFMGTPDFSTTVLEMLI-------AEHDVIAVVTQPDRPVGRKRVMTPPPVKKVAMKYD 56
Query: 112 FPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPL 171
P ++ PE+ L L L +L +TAA+G +LP L +P +G +N+H SLLP
Sbjct: 57 LP---VYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALPKLGAINVHASLLPK 113
Query: 172 YRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGS 231
YRG AP+ +A+ G +ETG+++ + V+ LDAG +I+++ +++++ + L G+
Sbjct: 114 YRGGAPIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEENDNVGTMHDKLSVLGA 173
Query: 232 ELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAGWP 291
+LL LPSI++G+ ++ PQDD++AT A I E+ +S+++ + N++R + WP
Sbjct: 174 DLLKETLPSIIEGTN--ESVPQDDTQATFASNIRREDERISWNKPGRQVFNQIRGLSPWP 231
Query: 292 GTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDG----ITFKKDALVVPCGECTA 347
M DD N LKI + ++TN+++ I K A++V + A
Sbjct: 232 VAYTTM---DDTN-------LKIYDAEL---VETNKINEPGTIIETTKKAIIVATNDNEA 278
Query: 348 LEVLEVQLPGKKAVSAAAFWNG----LRGQKL 375
+ + ++QL GKK + AA + +G L G+KL
Sbjct: 279 VAIKDMQLAGKKRMLAANYLSGAQNTLVGKKL 310
>sp|A6U135|FMT_STAA2 Methionyl-tRNA formyltransferase OS=Staphylococcus aureus (strain
JH1) GN=fmt PE=3 SV=1
Length = 311
Score = 172 bits (435), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 182/332 (54%), Gaps = 33/332 (9%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
++F+G+P S VL+ L + +V A+VTQP R R + P PV + A+
Sbjct: 4 IIFMGTPDFSTTVLEMLI-------AEHDVIAVVTQPDRPVGRKRVMTPPPVKKVAMKYD 56
Query: 112 FPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPL 171
P ++ PE+ L L L +L +TAA+G +LP L +P +G +N+H SLLP
Sbjct: 57 LP---VYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALPKLGAINVHASLLPK 113
Query: 172 YRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGS 231
YRG AP+ +A+ G +ETG+++ + V+ LDAG +I+++ +++++ + L G+
Sbjct: 114 YRGGAPIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEENDNVGTMHDKLSVLGA 173
Query: 232 ELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAGWP 291
+LL LPSI++G+ ++ PQDD++AT A I E+ +S+++ + N++R + WP
Sbjct: 174 DLLKETLPSIIEGTN--ESVPQDDTQATFASNIRREDERISWNKPGRQVFNQIRGLSPWP 231
Query: 292 GTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDG----ITFKKDALVVPCGECTA 347
M DD N LKI + ++TN+++ I K A++V + A
Sbjct: 232 VAYTTM---DDTN-------LKIYDAEL---VETNKINEPGTIIETTKKAIIVATNDNEA 278
Query: 348 LEVLEVQLPGKKAVSAAAFWNG----LRGQKL 375
+ + ++QL GKK + AA + +G L G+KL
Sbjct: 279 VAIKDMQLAGKKRMLAANYLSGAQNTLVGKKL 310
>sp|A7X1H4|FMT_STAA1 Methionyl-tRNA formyltransferase OS=Staphylococcus aureus (strain
Mu3 / ATCC 700698) GN=fmt PE=3 SV=1
Length = 311
Score = 172 bits (435), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 182/332 (54%), Gaps = 33/332 (9%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
++F+G+P S VL+ L + +V A+VTQP R R + P PV + A+
Sbjct: 4 IIFMGTPDFSTTVLEMLI-------AEHDVIAVVTQPDRPVGRKRVMTPPPVKKVAMKYD 56
Query: 112 FPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPL 171
P ++ PE+ L L L +L +TAA+G +LP L +P +G +N+H SLLP
Sbjct: 57 LP---VYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALPKLGAINVHASLLPK 113
Query: 172 YRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGS 231
YRG AP+ +A+ G +ETG+++ + V+ LDAG +I+++ +++++ + L G+
Sbjct: 114 YRGGAPIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEENDNVGTMHDKLSVLGA 173
Query: 232 ELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAGWP 291
+LL LPSI++G+ ++ PQDD++AT A I E+ +S+++ + N++R + WP
Sbjct: 174 DLLKETLPSIIEGTN--ESVPQDDTQATFASNIRREDERISWNKPGRQVFNQIRGLSPWP 231
Query: 292 GTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDG----ITFKKDALVVPCGECTA 347
M DD N LKI + ++TN+++ I K A++V + A
Sbjct: 232 VAYTTM---DDTN-------LKIYDAEL---VETNKINEPGTIIETTKKAIIVATNDNEA 278
Query: 348 LEVLEVQLPGKKAVSAAAFWNG----LRGQKL 375
+ + ++QL GKK + AA + +G L G+KL
Sbjct: 279 VAIKDMQLAGKKRMLAANYLSGAQNTLVGKKL 310
>sp|A8Z3Q2|FMT_STAAT Methionyl-tRNA formyltransferase OS=Staphylococcus aureus (strain
USA300 / TCH1516) GN=fmt PE=3 SV=1
Length = 311
Score = 171 bits (434), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 182/332 (54%), Gaps = 33/332 (9%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
++F+G+P S VL+ L + +V A+VTQP R R + P PV + A+
Sbjct: 4 IIFMGTPDFSTTVLEMLI-------AEHDVIAVVTQPDRPVGRKRVMTPPPVKKVAMKYD 56
Query: 112 FPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPL 171
P ++ PE+ L L L +L +TAA+G +LP L +P +G +N+H SLLP
Sbjct: 57 LP---VYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALPNLGAINVHASLLPK 113
Query: 172 YRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGS 231
YRG AP+ +A+ G +ETG+++ + V+ LDAG +I+++ +++++ + L G+
Sbjct: 114 YRGGAPIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEENDNVGTMHDKLSVLGA 173
Query: 232 ELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAGWP 291
+LL LPSI++G+ ++ PQDD++AT A I E+ +S+++ + N++R + WP
Sbjct: 174 DLLKETLPSIIEGTN--ESVPQDDTQATFASNIRREDERISWNKPGRQVFNQIRGLSPWP 231
Query: 292 GTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDG----ITFKKDALVVPCGECTA 347
M DD N LKI + ++TN+++ I K A++V + A
Sbjct: 232 VAYTTM---DDTN-------LKIYDAEL---VETNKINEPGTIIETTKKAIIVATNDNEA 278
Query: 348 LEVLEVQLPGKKAVSAAAFWNG----LRGQKL 375
+ + ++QL GKK + AA + +G L G+KL
Sbjct: 279 VAIKDMQLAGKKRMLAANYLSGAQNTLVGKKL 310
>sp|A6QGB6|FMT_STAAE Methionyl-tRNA formyltransferase OS=Staphylococcus aureus (strain
Newman) GN=fmt PE=3 SV=1
Length = 311
Score = 171 bits (434), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 182/332 (54%), Gaps = 33/332 (9%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
++F+G+P S VL+ L + +V A+VTQP R R + P PV + A+
Sbjct: 4 IIFMGTPDFSTTVLEMLI-------AEHDVIAVVTQPDRPVGRKRVMTPPPVKKVAMKYD 56
Query: 112 FPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPL 171
P ++ PE+ L L L +L +TAA+G +LP L +P +G +N+H SLLP
Sbjct: 57 LP---VYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALPNLGAINVHASLLPK 113
Query: 172 YRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGS 231
YRG AP+ +A+ G +ETG+++ + V+ LDAG +I+++ +++++ + L G+
Sbjct: 114 YRGGAPIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEENDNVGTMHDKLSVLGA 173
Query: 232 ELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAGWP 291
+LL LPSI++G+ ++ PQDD++AT A I E+ +S+++ + N++R + WP
Sbjct: 174 DLLKETLPSIIEGTN--ESVPQDDTQATFASNIRREDERISWNKPGRQVFNQIRGLSPWP 231
Query: 292 GTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDG----ITFKKDALVVPCGECTA 347
M DD N LKI + ++TN+++ I K A++V + A
Sbjct: 232 VAYTTM---DDTN-------LKIYDAEL---VETNKINEPGTIIETTKKAIIVATNDNEA 278
Query: 348 LEVLEVQLPGKKAVSAAAFWNG----LRGQKL 375
+ + ++QL GKK + AA + +G L G+KL
Sbjct: 279 VAIKDMQLAGKKRMLAANYLSGAQNTLVGKKL 310
>sp|Q5HGL6|FMT_STAAC Methionyl-tRNA formyltransferase OS=Staphylococcus aureus (strain
COL) GN=fmt PE=3 SV=1
Length = 311
Score = 171 bits (434), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 182/332 (54%), Gaps = 33/332 (9%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
++F+G+P S VL+ L + +V A+VTQP R R + P PV + A+
Sbjct: 4 IIFMGTPDFSTTVLEMLI-------AEHDVIAVVTQPDRPVGRKRVMTPPPVKKVAMKYD 56
Query: 112 FPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPL 171
P ++ PE+ L L L +L +TAA+G +LP L +P +G +N+H SLLP
Sbjct: 57 LP---VYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALPNLGAINVHASLLPK 113
Query: 172 YRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGS 231
YRG AP+ +A+ G +ETG+++ + V+ LDAG +I+++ +++++ + L G+
Sbjct: 114 YRGGAPIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEENDNVGTMHDKLSVLGA 173
Query: 232 ELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAGWP 291
+LL LPSI++G+ ++ PQDD++AT A I E+ +S+++ + N++R + WP
Sbjct: 174 DLLKETLPSIIEGTN--ESVPQDDTQATFASNIRREDERISWNKPGRQVFNQIRGLSPWP 231
Query: 292 GTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDG----ITFKKDALVVPCGECTA 347
M DD N LKI + ++TN+++ I K A++V + A
Sbjct: 232 VAYTTM---DDTN-------LKIYDAEL---VETNKINEPGTIIETTKKAIIVATNDNEA 278
Query: 348 LEVLEVQLPGKKAVSAAAFWNG----LRGQKL 375
+ + ++QL GKK + AA + +G L G+KL
Sbjct: 279 VAIKDMQLAGKKRMLAANYLSGAQNTLVGKKL 310
>sp|Q2FZ68|FMT_STAA8 Methionyl-tRNA formyltransferase OS=Staphylococcus aureus (strain
NCTC 8325) GN=fmt PE=3 SV=1
Length = 311
Score = 171 bits (434), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 182/332 (54%), Gaps = 33/332 (9%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
++F+G+P S VL+ L + +V A+VTQP R R + P PV + A+
Sbjct: 4 IIFMGTPDFSTTVLEMLI-------AEHDVIAVVTQPDRPVGRKRVMTPPPVKKVAMKYD 56
Query: 112 FPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPL 171
P ++ PE+ L L L +L +TAA+G +LP L +P +G +N+H SLLP
Sbjct: 57 LP---VYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALPNLGAINVHASLLPK 113
Query: 172 YRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGS 231
YRG AP+ +A+ G +ETG+++ + V+ LDAG +I+++ +++++ + L G+
Sbjct: 114 YRGGAPIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEENDNVGTMHDKLSVLGA 173
Query: 232 ELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAGWP 291
+LL LPSI++G+ ++ PQDD++AT A I E+ +S+++ + N++R + WP
Sbjct: 174 DLLKETLPSIIEGTN--ESVPQDDTQATFASNIRREDERISWNKPGRQVFNQIRGLSPWP 231
Query: 292 GTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDG----ITFKKDALVVPCGECTA 347
M DD N LKI + ++TN+++ I K A++V + A
Sbjct: 232 VAYTTM---DDTN-------LKIYDAEL---VETNKINEPGTIIETTKKAIIVATNDNEA 278
Query: 348 LEVLEVQLPGKKAVSAAAFWNG----LRGQKL 375
+ + ++QL GKK + AA + +G L G+KL
Sbjct: 279 VAIKDMQLAGKKRMLAANYLSGAQNTLVGKKL 310
>sp|Q2FHM2|FMT_STAA3 Methionyl-tRNA formyltransferase OS=Staphylococcus aureus (strain
USA300) GN=fmt PE=3 SV=1
Length = 311
Score = 171 bits (434), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 182/332 (54%), Gaps = 33/332 (9%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
++F+G+P S VL+ L + +V A+VTQP R R + P PV + A+
Sbjct: 4 IIFMGTPDFSTTVLEMLI-------AEHDVIAVVTQPDRPVGRKRVMTPPPVKKVAMKYD 56
Query: 112 FPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPL 171
P ++ PE+ L L L +L +TAA+G +LP L +P +G +N+H SLLP
Sbjct: 57 LP---VYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALPNLGAINVHASLLPK 113
Query: 172 YRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGS 231
YRG AP+ +A+ G +ETG+++ + V+ LDAG +I+++ +++++ + L G+
Sbjct: 114 YRGGAPIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEENDNVGTMHDKLSVLGA 173
Query: 232 ELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAGWP 291
+LL LPSI++G+ ++ PQDD++AT A I E+ +S+++ + N++R + WP
Sbjct: 174 DLLKETLPSIIEGTN--ESVPQDDTQATFASNIRREDERISWNKPGRQVFNQIRGLSPWP 231
Query: 292 GTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDG----ITFKKDALVVPCGECTA 347
M DD N LKI + ++TN+++ I K A++V + A
Sbjct: 232 VAYTTM---DDTN-------LKIYDAEL---VETNKINEPGTIIETTKKAIIVATNDNEA 278
Query: 348 LEVLEVQLPGKKAVSAAAFWNG----LRGQKL 375
+ + ++QL GKK + AA + +G L G+KL
Sbjct: 279 VAIKDMQLAGKKRMLAANYLSGAQNTLVGKKL 310
>sp|C0QUK8|FMT_PERMH Methionyl-tRNA formyltransferase OS=Persephonella marina (strain
DSM 14350 / EX-H1) GN=fmt PE=3 SV=1
Length = 311
Score = 171 bits (433), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 119/328 (36%), Positives = 169/328 (51%), Gaps = 24/328 (7%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
+VF G+P +V L AL +S +V A+VTQP + RG+KV P PV A
Sbjct: 3 VVFWGTPDFAVESLKALI------ESKHQVVAVVTQPDKPKGRGKKVQPPPVKVLAEKYS 56
Query: 112 FPADLIFTPERA-GEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLP 170
P +F PE+ G L+ L+P++ + AYG ILP + +N+P TVN+H SLLP
Sbjct: 57 IP---VFQPEKVKGNKELYQKLKELEPDIFVVVAYGKILPEEIINLPKYKTVNVHASLLP 113
Query: 171 LYRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEG 230
YRGAAP+ RA+ G ++TGV + V+ LDAG + ++ + DQ L L EG
Sbjct: 114 EYRGAAPIHRAIMEGKEKTGVCIMEIVKELDAGDIYQCVEIPITDQDDIVSLHDKLAKEG 173
Query: 231 SELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAGW 290
++LL+ L I G +K PQD +AT A I EE + + A + N+VRA W
Sbjct: 174 AKLLLDTLDKIEKGE--IKKVPQDHERATYAKPIEKEEGRIDWKRSAREIFNQVRALKVW 231
Query: 291 PGTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDGITFKKDALVVPCGECTALEV 350
P A + R+ Q I+E +II R + E+ I K + VV G+ L +
Sbjct: 232 P-----KAFSNFRDTQIKILECEIIDER--SEGEPGEIVKI-MKDEGFVVQTGKGKLL-I 282
Query: 351 LEVQLPGKKAVSAAAFWNGLR---GQKL 375
+VQ P K +SAA G R G+KL
Sbjct: 283 KKVQFPNSKPISAADAVRGYRIKEGEKL 310
>sp|Q8NX18|FMT_STAAW Methionyl-tRNA formyltransferase OS=Staphylococcus aureus (strain
MW2) GN=fmt PE=3 SV=1
Length = 311
Score = 171 bits (433), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 182/332 (54%), Gaps = 33/332 (9%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
++F+G+P S VL+ L + +V A+VTQP R R + P PV + A+
Sbjct: 4 IIFMGTPDFSTTVLEMLI-------AEHDVIAVVTQPDRPVGRKRVMTPPPVKKVAMKYD 56
Query: 112 FPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPL 171
P ++ PE+ L L L +L +TAA+G +LP L +P +G +N+H SLLP
Sbjct: 57 LP---VYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALPKLGAINVHASLLPK 113
Query: 172 YRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGS 231
YRG AP+ +A+ G +ETG+++ + V+ LDAG +I+++ +++++ + L G+
Sbjct: 114 YRGGAPIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEENDNVGTMHDKLSVLGA 173
Query: 232 ELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAGWP 291
+LL LPSI++G+ ++ PQDD++AT A I E+ +++++ + N++R + WP
Sbjct: 174 DLLKETLPSIIEGTN--ESVPQDDTQATFASNIRREDERINWNKPGRQVFNQIRGLSPWP 231
Query: 292 GTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDG----ITFKKDALVVPCGECTA 347
M DD N LKI + ++TN+++ I K A++V + A
Sbjct: 232 VAYTTM---DDTN-------LKIYDAEL---VETNKINEPGTIIETTKKAIIVATNDNEA 278
Query: 348 LEVLEVQLPGKKAVSAAAFWNG----LRGQKL 375
+ + ++QL GKK + AA + +G L G+KL
Sbjct: 279 VAIKDMQLAGKKRMLAANYLSGAQNTLVGKKL 310
>sp|Q6G9Z7|FMT_STAAS Methionyl-tRNA formyltransferase OS=Staphylococcus aureus (strain
MSSA476) GN=fmt PE=3 SV=1
Length = 311
Score = 171 bits (433), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 105/332 (31%), Positives = 182/332 (54%), Gaps = 33/332 (9%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
++F+G+P S VL+ L + +V A+VTQP R R + P PV + A+
Sbjct: 4 IIFMGTPDFSTTVLEMLI-------AEHDVIAVVTQPDRPVGRKRVMTPPPVKKVAMKYD 56
Query: 112 FPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPL 171
P ++ PE+ L L L +L +TAA+G +LP L +P +G +N+H SLLP
Sbjct: 57 LP---VYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALPKLGAINVHASLLPK 113
Query: 172 YRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGS 231
YRG AP+ +A+ G +ETG+++ + V+ LDAG +I+++ +++++ + L G+
Sbjct: 114 YRGGAPIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEENDNVGTMHDKLSVLGA 173
Query: 232 ELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAGWP 291
+LL LPSI++G+ ++ PQDD++AT A I E+ +++++ + N++R + WP
Sbjct: 174 DLLKETLPSIIEGTN--ESVPQDDTQATFASNIRREDERINWNKPGRQVFNQIRGLSPWP 231
Query: 292 GTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDG----ITFKKDALVVPCGECTA 347
M DD N LKI + ++TN+++ I K A++V + A
Sbjct: 232 VAYTTM---DDTN-------LKIYDAEL---VETNKINEPGTIIETTKKAIIVATNDNEA 278
Query: 348 LEVLEVQLPGKKAVSAAAFWNG----LRGQKL 375
+ + ++QL GKK + AA + +G L G+KL
Sbjct: 279 VAIKDMQLAGKKRMLAANYLSGAQNTLVGKKL 310
>sp|Q3J6T9|FMT_NITOC Methionyl-tRNA formyltransferase OS=Nitrosococcus oceani (strain
ATCC 19707 / NCIMB 11848) GN=fmt PE=3 SV=1
Length = 323
Score = 169 bits (427), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 111/319 (34%), Positives = 167/319 (52%), Gaps = 24/319 (7%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
++F G+P + +L L A + + A+ TQP RGR+ PSPV A+
Sbjct: 7 ILFAGTPVFAAIILRRLLEAK------YHIGAVYTQPDRPSGRGRRPTPSPVKDIAITHQ 60
Query: 112 FPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPL 171
P ++ P + + L AL P+L + AAYG ILP+ L IPP+G +N+H SLLP
Sbjct: 61 LP---LYQPATLKDKGSQAQLAALAPDLMVVAAYGLILPATVLQIPPLGCINVHASLLPR 117
Query: 172 YRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGS 231
+RGAAP+QRAL G K TG+S+ LD GPV+ + + + A + L G+
Sbjct: 118 WRGAAPIQRALLAGDKVTGISIMQMDAGLDTGPVVHTARYPIHPKDTAATVHDQLAELGA 177
Query: 232 ELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAGWP 291
E L++ LPS+L+ A + A QD+S+A APKI EE+WL + + AV+L +VRAF WP
Sbjct: 178 EALLQCLPSLLEKKANI-ATLQDESQACYAPKIRKEEAWLDWSQPAVLLERQVRAFNPWP 236
Query: 292 GTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDG--ITFKKDALVVPCGECTALE 349
V + G +++ + + N + G + K + V G T L
Sbjct: 237 -------VAQTQIGGKTLR----VWSAAALAQTANALPGTLLAVHKTGIDVATGNGT-LR 284
Query: 350 VLEVQLPGKKAVSAAAFWN 368
+LEVQL GK+ ++ + N
Sbjct: 285 LLEVQLAGKRVMTVQDYLN 303
>sp|Q3AC19|FMT_CARHZ Methionyl-tRNA formyltransferase OS=Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008) GN=fmt PE=3
SV=1
Length = 308
Score = 168 bits (426), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 111/323 (34%), Positives = 174/323 (53%), Gaps = 29/323 (8%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
+V++G+P+ +V L L S EVA +VT+P + RG+KV+ SPV +A +
Sbjct: 3 IVYMGTPEFAVKPLAKLI-------SHHEVALVVTKPDAAAGRGKKVISSPVKLFAQENH 55
Query: 112 FPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPL 171
+ TP + E+ + + A++PE+ + AAYG +LP + LNIPP G +NIH SLLP
Sbjct: 56 L---RVITPLKFNEEVY-QEILAVKPEVIVVAAYGKLLPREILNIPPYGCLNIHASLLPF 111
Query: 172 YRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGS 231
YRGAAP++R L G KETG+++ F LD G + +EK+ ++ +I EL +L G+
Sbjct: 112 YRGAAPIERCLMAGEKETGITIMFMDEGLDTGDIALQEKVAINQEITGGELRKILAEIGA 171
Query: 232 ELLIRELPSILDGSA-RVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAGW 290
+L+I L + +G RV PQD AT AP + E+ + + + A + N++RA
Sbjct: 172 DLIIEALKRLREGGLPRV---PQDHQLATYAPPLKKEDEIIHWADSAEKIRNQIRALNPV 228
Query: 291 PGTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDGITF--KKDALVVPCGECTAL 348
PG G++ +KI +V + I F +K+ +V GE L
Sbjct: 229 PGAYTVF------RGKK----IKIWKAKVG-EFSGKKPGEIIFADRKNGFLVATGE-RGL 276
Query: 349 EVLEVQLPGKKAVSAAAFWNGLR 371
++LE+Q G K +S +F NG R
Sbjct: 277 QILELQPEGGKKMSWESFLNGYR 299
>sp|A8FD38|FMT_BACP2 Methionyl-tRNA formyltransferase OS=Bacillus pumilus (strain
SAFR-032) GN=fmt PE=3 SV=1
Length = 317
Score = 168 bits (426), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 112/331 (33%), Positives = 167/331 (50%), Gaps = 25/331 (7%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
+VF+G+P SV VL L +EV +VTQP + R R + P PV AL G
Sbjct: 4 IVFMGTPDFSVPVLQTLITEG------YEVVGVVTQPDRPKGRKRVLTPPPVKVEALKHG 57
Query: 112 FPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPL 171
P + PE+ D + + AL+P+L +TAA+G ILP + L+ P G +N+H SLLP
Sbjct: 58 IP---VLQPEKVRLDEEIDKVLALKPDLIVTAAFGQILPKRLLDEPQFGCINVHASLLPE 114
Query: 172 YRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGS 231
RG AP+ A+ G K+TGV++ + V LDAG +I++ ++E+D+ L L G+
Sbjct: 115 LRGGAPIHYAILQGKKKTGVTIMYMVERLDAGDMISKVEVEIDELDNVGTLHDKLSVAGA 174
Query: 232 ELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAGWP 291
LL +P++L GS + PQ++ AT AP I E+ L + + L+N+VR WP
Sbjct: 175 ALLKDTVPNVLSGS--ISPIPQNEDAATYAPNIKREQERLDWTKTGEELYNQVRGLNPWP 232
Query: 292 GTRAKMAVVDDRNGQQSIVELKIITTRVCP-NIQTNEVDGITFKKDALVVPCGECTALEV 350
+ NG LK+ + P +Q I +K+ V+ G L +
Sbjct: 233 ------VAYTEWNG----AHLKVWEAKKVPLEVQEEAGKVIELQKEGPVIGTGNKQGLLL 282
Query: 351 LEVQLPGKKAVSAAAFWNGLR---GQKLKVL 378
VQ GKK +S F G GQKL ++
Sbjct: 283 TGVQPAGKKKMSGEDFLRGANIEIGQKLGLM 313
>sp|Q9WYZ8|FMT_THEMA Methionyl-tRNA formyltransferase OS=Thermotoga maritima (strain
ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=fmt PE=3
SV=1
Length = 313
Score = 167 bits (424), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 109/322 (33%), Positives = 170/322 (52%), Gaps = 25/322 (7%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
+VF+G+P+ + +L+ L F V +VTQP R RGRKV P+PV A
Sbjct: 3 IVFVGTPEFAAEILEHLIKNG------FNVVGVVTQPDKPRGRGRKVAPTPVKAVAEKHE 56
Query: 112 FPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPL 171
P PE + L LR+++P++ I A+YG IL K L++P +G NIHPSLLP
Sbjct: 57 VP---FIQPESINKKEALEFLRSVRPDVIIVASYGKILGEKVLSLPRLGCYNIHPSLLPK 113
Query: 172 YRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGS 231
YRGA+P+QR L+ G + TGV++ V+ LDAGP+ ++++ VD +L L
Sbjct: 114 YRGASPIQRVLENGEERTGVTIYKMVKELDAGPIALQKEISVDPFETFDQLEKRLIELSK 173
Query: 232 ELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAGWP 291
E+LI L + G+ +K QD S+AT AP I E+ + F ++A + NK+RA+ P
Sbjct: 174 EMLIEFLEKLKTGNIELKE--QDHSRATYAPMIKKEDLIVDFSKDAESVKNKIRAYDSRP 231
Query: 292 GTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDGITFKKDALVVPCGECTALEVL 351
G RA + V+ V+L +T + ++ I ++ + G+ ++V
Sbjct: 232 GARAFLGNVE--------VKLFGVTAIDSSGDEPGLINYID--REGAWIGTGDGK-VKVR 280
Query: 352 EVQLPGKKAVSAAAFWNGLRGQ 373
+Q PGKK ++ FW G+
Sbjct: 281 YIQFPGKKKMT---FWEAKNGR 299
>sp|Q8R9T1|FMT_THETN Methionyl-tRNA formyltransferase OS=Thermoanaerobacter
tengcongensis (strain DSM 15242 / JCM 11007 / NBRC
100824 / MB4) GN=fmt PE=3 SV=1
Length = 309
Score = 167 bits (423), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 163/320 (50%), Gaps = 25/320 (7%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
+VF+G+P+ +V L LF ++V A+VTQP +R RG KV SPV + AL +G
Sbjct: 3 IVFMGTPEFAVPSLKRLFEEG------YDVLAVVTQPDKQRGRGMKVSFSPVKELALQKG 56
Query: 112 FPADLIFTPERAGED-AFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLP 170
+ PE + FL L+ L PE+ + AAYG ILP + L +P G +N+H SLLP
Sbjct: 57 VK---VLQPESVKNNPEFLQELKELNPEVIVVAAYGKILPEEILTLPEYGCINVHASLLP 113
Query: 171 LYRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEG 230
YRGAAP+ A+ G KETG++ + LD G ++ + + +++ A L L + G
Sbjct: 114 KYRGAAPINWAIINGEKETGITTMLMDKGLDTGDMLLKRSIAIEEDDDAQTLHDKLANLG 173
Query: 231 SELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAGW 290
+E+L L + +G ++ + Q D +AT AP IT E + + A + N +R W
Sbjct: 174 AEVLSETLKKLKEG--KLIPEKQKDEEATYAPIITKEMGHIDWKSPACRIRNLIRGLKPW 231
Query: 291 PGTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDGITFK-KDALVVPCGECTALE 349
PG D + LKI V + NE G K KD L+V CGE AL
Sbjct: 232 PGC---YTFYDGKM-------LKIWKAEVVEHF-GNEPPGSVLKSKDELIVKCGE-NALR 279
Query: 350 VLEVQLPGKKAVSAAAFWNG 369
+LE+Q G + + + G
Sbjct: 280 ILEIQQEGSRKMGIREYLIG 299
>sp|A1WZH3|FMT_HALHL Methionyl-tRNA formyltransferase OS=Halorhodospira halophila
(strain DSM 244 / SL1) GN=fmt PE=3 SV=1
Length = 310
Score = 166 bits (420), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 113/321 (35%), Positives = 163/321 (50%), Gaps = 24/321 (7%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
+VF G+P +V LDAL A P ++F TQP RGR++ P PV + A G
Sbjct: 5 IVFAGTPDFAVPGLDALVEAGVRPVAVF------TQPDRPAGRGRRLTPPPVKRAAERHG 58
Query: 112 FPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPL 171
+ PER G + +RAL P+L + AYG IL L++P G VN+H SLLP
Sbjct: 59 LG---VHQPERLGAEEA-EQIRALAPDLMVVVAYGQILRRNVLDVPRFGCVNVHASLLPR 114
Query: 172 YRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGS 231
+RGAAP+QRAL G ++TGV+L LD GP++AR+ + A L L G+
Sbjct: 115 WRGAAPIQRALLAGDEQTGVTLMQMDEGLDTGPMLARKATPISADETAGSLHDRLARIGA 174
Query: 232 ELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAGWP 291
+LL+ LP IL G+ + +PQ D T A K+T +ESWL E A L +VRA A P
Sbjct: 175 DLLVAHLPEILAGA--ITPEPQPDDGVTYAAKLTNDESWLDPTEPAEQLERRVRALAPVP 232
Query: 292 GTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDGI-TFKKDALVVPCGECTALEV 350
G R ++ G+ + +++ R C + + + V GE LE+
Sbjct: 233 GARLQL-------GETPV---RVLAARACAGRPEDRAGTVAAVGSGGIEVATGEGR-LEI 281
Query: 351 LEVQLPGKKAVSAAAFWNGLR 371
++ G + +AA + NG R
Sbjct: 282 TRLKPAGGREQTAADYLNGRR 302
>sp|Q8CSW1|FMT_STAES Methionyl-tRNA formyltransferase OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=fmt PE=3 SV=1
Length = 310
Score = 165 bits (417), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 172/320 (53%), Gaps = 22/320 (6%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
++F+G+P S +L+ L + EV A+VTQP R + + P PV + A
Sbjct: 4 IIFMGTPDFSTKILEMLI-------AEHEVIAVVTQPDRPVGRKKVMTPPPVKRVATKHQ 56
Query: 112 FPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPL 171
P ++ PE+ + L +L +L+ +L +TAA+G +LP LN P +G +N+H SLLP
Sbjct: 57 IP---VYQPEKLKDSQELESLLSLESDLIVTAAFGQLLPESLLNAPKLGAINVHASLLPK 113
Query: 172 YRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGS 231
YRG AP+ +A+ G +ETG+++ + V+ LDAG +I+++ + ++++ + L G+
Sbjct: 114 YRGGAPIHQAIIDGEEETGITIMYMVKKLDAGNIISQQSIRIEEEDNVGTMHDKLSFLGA 173
Query: 232 ELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAGWP 291
ELL + LPSI+D + + PQDD+ AT A I E+ + ++ A +HN +R + WP
Sbjct: 174 ELLKKTLPSIIDNTN--DSIPQDDALATFASNIRREDERVDWNMSAQAIHNHIRGLSPWP 231
Query: 292 GTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDGITFKKDALVVPCGECTALEVL 351
M +++N LK+ + + + N I K L++ G A+ +
Sbjct: 232 VAYTTM---NEKN-------LKLFSAFIVKGKKGNPGTIIETTKHELIIATGSDDAIALT 281
Query: 352 EVQLPGKKAVSAAAFWNGLR 371
E+Q GKK + + +G++
Sbjct: 282 EIQPAGKKRMKVTDYLSGVQ 301
>sp|B9KBC2|FMT_THENN Methionyl-tRNA formyltransferase OS=Thermotoga neapolitana (strain
ATCC 49049 / DSM 4359 / NS-E) GN=fmt PE=3 SV=1
Length = 313
Score = 164 bits (416), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 108/325 (33%), Positives = 170/325 (52%), Gaps = 28/325 (8%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
+VF+G+P+ + +L + + +VTQP + RGRK LP+PV A ++G
Sbjct: 3 VVFVGTPEFAAEILRYMVKKG------INIVGVVTQPDKPKGRGRKTLPTPVKVVAEEKG 56
Query: 112 FPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPL 171
P PE L L ++ P++ I A+YG IL K L++P G NIHPSLLP
Sbjct: 57 LPC---IQPESINRKEALEFLHSVNPDVLIVASYGKILGEKVLSLPKHGCYNIHPSLLPK 113
Query: 172 YRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGS 231
YRGA+P+QRAL+ G K+TGV++ V+ LDAGP+ + ++ +D +L L
Sbjct: 114 YRGASPIQRALENGEKKTGVTIYRMVKELDAGPIALQREVNIDPFETFDQLEKRLIELSK 173
Query: 232 ELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAGWP 291
E++I L + +G ++ QD ++AT AP I E+ ++ F + A + NK+RA+ P
Sbjct: 174 EMVIEFLEKLENGEIHLRE--QDHTRATYAPLIKKEDLFVDFSKGAETVKNKIRAYDSRP 231
Query: 292 GTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDGITFKKDALVVPCGECTAL-EV 350
G RA + NG+ E+K+ + +N+ G+ D G + +V
Sbjct: 232 GARAFL------NGK----EVKLFGAMAVDS--SNDEPGLIHYIDREGAWIGTGKGMVKV 279
Query: 351 LEVQLPGKKAVSAAAFWNGLRGQKL 375
+QLPGKK ++ FW LR +L
Sbjct: 280 KYLQLPGKKKLT---FWE-LRNGRL 300
>sp|Q1DCG7|FMT_MYXXD Methionyl-tRNA formyltransferase OS=Myxococcus xanthus (strain DK
1622) GN=fmt PE=3 SV=1
Length = 312
Score = 164 bits (416), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 113/326 (34%), Positives = 160/326 (49%), Gaps = 31/326 (9%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
+VF+G+P+ +V+ L A F + +V A+VTQP + RG V PV + AL RG
Sbjct: 6 IVFMGTPEFAVSSLAACFE-------LGDVVAVVTQPDKPKGRGNTVTAPPVKELALSRG 58
Query: 112 FPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPL 171
P + P + F LR P++C+ AYG ILP L +P G VN+H SLLP
Sbjct: 59 VP---VLQPTKLRTPPFAEELRQYAPDVCVVTAYGRILPKDLLELPTHGCVNVHGSLLPR 115
Query: 172 YRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGS 231
+RGAAP+Q A+ G ETGVSL LD GPV+A ++M + + L L + G
Sbjct: 116 FRGAAPIQWAIAHGDTETGVSLMVMDEGLDTGPVLAMKRMAIAPDETSASLYPKLAALGG 175
Query: 232 ELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAGWP 291
E+L LP+ L G +K PQ LAP I ++ L F + AV L ++RAF WP
Sbjct: 176 EVLREFLPAYLSGE--LKPVPQPSEGMVLAPIIEKDQGRLDFTKPAVELERRLRAFTPWP 233
Query: 292 GTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDGITFKK--DALVVPCGECTALE 349
G + K++ + G D + V CGE + L
Sbjct: 234 GAFTTLGG-------------KLLKVHRAQARGGSGAPGTVLASGPDGIEVACGEGS-LV 279
Query: 350 VLEVQLPGKKAVSAAAFWNGLRGQKL 375
+L++Q GK+ + AA F L+G KL
Sbjct: 280 LLDLQPEGKRVMRAADF---LQGHKL 302
>sp|C1F542|FMT_ACIC5 Methionyl-tRNA formyltransferase OS=Acidobacterium capsulatum
(strain ATCC 51196 / DSM 11244 / JCM 7670) GN=fmt PE=3
SV=1
Length = 311
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/325 (34%), Positives = 163/325 (50%), Gaps = 25/325 (7%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
LVF G+P +V L+AL A +VA +VTQP RG +VL PV Q AL G
Sbjct: 3 LVFCGTPAFAVPTLEALLQAGH------DVALVVTQPDRPSGRGMQVLAPPVKQTALAAG 56
Query: 112 FPADLIFTPERAGED-AFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLP 170
P + PE+ + F + L A+ P+ I AYG I+P L++P G +N+H SLLP
Sbjct: 57 LP---VVQPEKIKNNLEFRAQLEAIAPDAIIVVAYGRIIPKWMLDLPRYGNLNLHASLLP 113
Query: 171 LYRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEG 230
YRGAAP+Q A+ G TG + LD G ++ +++ME+ + A EL LL G
Sbjct: 114 KYRGAAPIQWAVAMGETVTGATTMRIDEGLDTGDMLLQDEMEIPPAMTAEELFPLLAEMG 173
Query: 231 SELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAGW 290
+ L++ L + G+ V Q QD+++ATLAP +T E+ + F A ++N+ R F W
Sbjct: 174 APLMVETLAGLEQGT--VTPQKQDEAQATLAPILTREDGRVDFARSAAEIYNRWRGFQPW 231
Query: 291 PGTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDGITFKKDALVVPCGECTALEV 350
PG + G++ + ++ R E + L CG+ LE+
Sbjct: 232 PGAWTML------GGKKLTLHRMLLAERE----DRAEPGMVRVHAGRLFFACGDGGWLEI 281
Query: 351 LEVQLPGKKAVSAAAFWNGLRGQKL 375
E+QL GKK + F LRG L
Sbjct: 282 AELQLEGKKRMPVTDF---LRGNTL 303
>sp|P94463|FMT_BACSU Methionyl-tRNA formyltransferase OS=Bacillus subtilis (strain 168)
GN=fmt PE=3 SV=2
Length = 317
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 166/319 (52%), Gaps = 22/319 (6%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
+VF+G+P SV VL L +EV +VTQP + R + + P PV + AL G
Sbjct: 4 IVFMGTPDFSVPVLRTLIEDG------YEVVGVVTQPDRPKGRKKVLTPPPVKEEALRHG 57
Query: 112 FPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPL 171
P + PE+ + + AL+P+L +TAA+G ILP + L+ P G +N+H SLLP
Sbjct: 58 IP---VLQPEKVRLTEEIEKVLALKPDLIVTAAFGQILPKELLDSPKYGCINVHASLLPE 114
Query: 172 YRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGS 231
RG AP+ ++ G K+TG+++ + V LDAG +I++ ++++++ L L G+
Sbjct: 115 LRGGAPIHYSILQGKKKTGITIMYMVEKLDAGDMISKVEVDIEETDNVGTLHDKLSVAGA 174
Query: 232 ELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAGWP 291
+LL +P+++ GS + + QD+ KAT AP I E+ L + L+N++R WP
Sbjct: 175 KLLSETVPNVIAGS--ISPEKQDEEKATYAPNIKREQELLDWSRTGEELYNQIRGLNPWP 232
Query: 292 GTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDGIT-FKKDALVVPCGECTALEV 350
+ NGQ LKI ++ T E + +K+ ++V G TAL +
Sbjct: 233 VAYTTL------NGQN----LKIWASKKIAAPTTAEPGTVVAVEKEGIIVATGNETALLL 282
Query: 351 LEVQLPGKKAVSAAAFWNG 369
E+Q GKK + F G
Sbjct: 283 TELQPAGKKRMKGEDFVRG 301
>sp|A9B2Z9|FMT_HERA2 Methionyl-tRNA formyltransferase OS=Herpetosiphon aurantiacus
(strain ATCC 23779 / DSM 785) GN=fmt PE=3 SV=1
Length = 306
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/322 (34%), Positives = 176/322 (54%), Gaps = 25/322 (7%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRK-VLPSPVAQYALDR 110
+++LG+P+++V L+ L +AS E+ +VTQP R GRK VL +P + A +R
Sbjct: 3 ILYLGTPEIAVAPLE-LLHASG-----HEIVGVVTQP--DRPAGRKNVLTAPPVKLAAER 54
Query: 111 -GFPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLL 169
G P +F PE + A ++ LRA +PE+ + AAYG IL + L IP +G +NIHPS+L
Sbjct: 55 LGIP---VFQPETLKDPAAVARLRAFEPEVGVVAAYGEILRKQVLAIPALGYLNIHPSIL 111
Query: 170 PLYRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSE 229
PLYRG APV A+ G GVS+ +DAGP++ + M + + +A E L +
Sbjct: 112 PLYRGPAPVTGAILAGDDLVGVSIIKLTAKMDAGPILGQMVMPLANDARAGEWTAQLMRQ 171
Query: 230 GSELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAG 289
G ELL + LP+ G +++AQ QDDS+A+ I+ + ++++ A+V+ RA+
Sbjct: 172 GGELLAQVLPAYAAG--QIQAQIQDDSQASYTQMISKNDGLINWNLPALVIERMTRAYDP 229
Query: 290 WPGTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDGITFKKDALVVPCGECTALE 349
WPGT K+ N Q KI+ + + G F++ ++ ALE
Sbjct: 230 WPGTAVKL------NDQ----PFKILRAKAHTSWSGTIQPGTLFEQQGQILVATGSGALE 279
Query: 350 VLEVQLPGKKAVSAAAFWNGLR 371
+LEVQ GK+ ++A + G +
Sbjct: 280 LLEVQPAGKRPMAANDWRRGAK 301
>sp|A3DCX5|FMT_CLOTH Methionyl-tRNA formyltransferase OS=Clostridium thermocellum
(strain ATCC 27405 / DSM 1237) GN=fmt PE=3 SV=1
Length = 311
Score = 164 bits (414), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/329 (32%), Positives = 168/329 (51%), Gaps = 24/329 (7%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
+VF+G+P+ ++ L+ L +EVAA+VTQP + RG+K PV ++A+
Sbjct: 3 IVFMGTPEFAIPSLEMLVRER------YEVAAVVTQPDKPKGRGKKTAMPPVKEFAIKNN 56
Query: 112 FPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPL 171
+ P + F+S +R L+P+L +TAAYG ILP + L+IPP G VN+H SLLP
Sbjct: 57 IE---VLQPSKVKTPEFVSTIRELRPDLLVTAAYGKILPQEVLDIPPYGCVNVHGSLLPK 113
Query: 172 YRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGS 231
YRGAAP+ A+ G K TG++ +T +D G ++ + ++E+ D + A EL L G+
Sbjct: 114 YRGAAPINWAIINGEKVTGITTMYTDAGMDTGDMLLKAEIEISDDMTAGELHDKLACLGA 173
Query: 232 ELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAGWP 291
E+L L I D + + QP + +AT AP + +++ + A +HN VR WP
Sbjct: 174 EVLRETLKKIEDSTLQRIPQPHE--QATYAPMLDKTVGCINWSKSARDVHNLVRGTNPWP 231
Query: 292 GTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDGITFK--KDALVVPCGECTALE 349
GQ+ +K+ T V N G K KD LVV CG +
Sbjct: 232 ------VAFTYYKGQK----MKVWVTSVLDEENHNFTPGTILKVGKDGLVVACG-VGKVV 280
Query: 350 VLEVQLPGKKAVSAAAFWNGLRGQKLKVL 378
+ EVQ + ++ + G + + +VL
Sbjct: 281 IKEVQFDSSRRMTVEEYICGHKVGEGEVL 309
>sp|Q5WFK7|FMT_BACSK Methionyl-tRNA formyltransferase OS=Bacillus clausii (strain
KSM-K16) GN=fmt PE=3 SV=1
Length = 312
Score = 163 bits (413), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/325 (33%), Positives = 163/325 (50%), Gaps = 37/325 (11%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
+VF+G+P SV +L L + + V A+VTQP R R + PSPV + A G
Sbjct: 3 IVFMGTPAFSVPILKRLIDTHT-------VLAVVTQPDRPVGRKRLLTPSPVKEEAQKHG 55
Query: 112 FPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPL 171
P + PE+ E ++ A PEL +TAAYG I+P L+ PP G +N+H SLLP
Sbjct: 56 IP---VLQPEKIREQH--EDILAFAPELIVTAAYGQIVPKAVLDAPPYGCINVHASLLPK 110
Query: 172 YRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGS 231
YRG AP+ +A+ G K+TG+S+ + LDAG V++++ + + D+ + L + G+
Sbjct: 111 YRGGAPIHQAIIDGEKQTGISIMYMAEKLDAGAVLSQQAVAITDEDDVQTMHDKLSAVGA 170
Query: 232 ELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAGWP 291
+LL + + ++ G+ ++A QD+ KAT AP I E+ L + + A L N+VR WP
Sbjct: 171 DLLEKTIVALEQGT--IEAVAQDEDKATFAPNIKREQEVLDWQKPARALFNQVRGMRPWP 228
Query: 292 -------GTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDGITFKKDALVVPCGE 344
G R K+ + G+ +I+ T K + V CG
Sbjct: 229 VAYTLVNGNRLKVWEAKEIAGEHECEPGEILAT----------------TKQGIDVACGN 272
Query: 345 CTALEVLEVQLPGKKAVSAAAFWNG 369
T L + VQ GKKAV A G
Sbjct: 273 GTILRLTVVQPAGKKAVLANQLLQG 297
>sp|A5V070|FMT_ROSS1 Methionyl-tRNA formyltransferase OS=Roseiflexus sp. (strain RS-1)
GN=fmt PE=3 SV=1
Length = 325
Score = 163 bits (413), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/327 (33%), Positives = 172/327 (52%), Gaps = 23/327 (7%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
+VFLGSP +V L+ L D+ ++V +VTQP RGR + +PV Q AL G
Sbjct: 5 IVFLGSPAFAVAPLERLVA-----DARYQVVGVVTQPDRPAGRGRASVATPVKQAALRLG 59
Query: 112 FPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPL 171
P + TPE + A ++ L AL+P++ + AAYG IL L IPP+G VNIHPSLLPL
Sbjct: 60 VP---VLTPETLRDPAAVAELAALRPDVGVVAAYGEILRRDVLAIPPLGYVNIHPSLLPL 116
Query: 172 YRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGS 231
YRG +PV A+ G ETGV++ +D+GP++A+ + + + L LF+ G+
Sbjct: 117 YRGPSPVAGAILNGDAETGVTIMLIDAKMDSGPILAQRTVPLPPDARTGPLTQELFTIGA 176
Query: 232 ELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAGWP 291
++L+ L + G+ + QPQD ++AT +T ++ + + + AV + RA+ WP
Sbjct: 177 DVLVETLDAYARGA--ITPQPQDHARATFTKLLTRDDGIIDWTQPAVRIERMTRAYDPWP 234
Query: 292 GTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDGITFKKDALVVPCGECTALEVL 351
G A R I+ ++I R C ++ + D V G L ++
Sbjct: 235 G-----ATTMWRGAPLKIIAARVIADR-CADVPPGT---LIDTADGPAVATGNGL-LALI 284
Query: 352 EVQLPGKKAVSAAAFWNGLR---GQKL 375
VQ GK+ + AA + GLR G++L
Sbjct: 285 TVQPAGKRPLPAADWRRGLRLSGGERL 311
>sp|B9LFJ4|FMT_CHLSY Methionyl-tRNA formyltransferase OS=Chloroflexus aurantiacus
(strain ATCC 29364 / DSM 637 / Y-400-fl) GN=fmt PE=3
SV=1
Length = 310
Score = 163 bits (413), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/328 (32%), Positives = 170/328 (51%), Gaps = 24/328 (7%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
++FLGSP +V+ L+AL A E+ +VTQP R R++ P PV A+
Sbjct: 3 ILFLGSPSFAVHALEALVAAG------HEIVGVVTQPDRPAGRDRRLTPPPVKIAAMAHN 56
Query: 112 FPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPL 171
P + PE + + L ALQPE+ + AAYG IL L+IPP+G +NIHPSLLPL
Sbjct: 57 LP---VLQPETLRDPTVVETLSALQPEVGVVAAYGEILRRAVLSIPPLGYLNIHPSLLPL 113
Query: 172 YRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGS 231
YRG PV A+ G TGV++ ++D+GP++A+ +++ +A +L LF G+
Sbjct: 114 YRGPTPVAGAILAGETVTGVTIMLLDPSMDSGPILAQAVVDLPPTARAGQLTDELFRIGA 173
Query: 232 ELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAGWP 291
+LL++ LP G ++ +PQD S+AT+ + E+ + + A+V+ RA+ WP
Sbjct: 174 DLLVQVLPRYARGE--IEPRPQDHSRATVTKMLKKEDGRIDWSLPAIVIERMTRAYDPWP 231
Query: 292 GTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDGITFKKDALVVPCGEC--TALE 349
G GQ L+II V TN V G + P + ALE
Sbjct: 232 GAYTFW------RGQ----PLRIIKAAVASADGTN-VPGTVIGRSGSGHPLVQTGSDALE 280
Query: 350 VLEVQLPGKKAVSAAAFWNGLRGQKLKV 377
++EVQ ++ +S +A+ G+ +++
Sbjct: 281 LIEVQPASRRPMSGSAWLAGVHADNIRL 308
>sp|A9WAR0|FMT_CHLAA Methionyl-tRNA formyltransferase OS=Chloroflexus aurantiacus
(strain ATCC 29366 / DSM 635 / J-10-fl) GN=fmt PE=3 SV=1
Length = 310
Score = 163 bits (413), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/328 (32%), Positives = 170/328 (51%), Gaps = 24/328 (7%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
++FLGSP +V+ L+AL A E+ +VTQP R R++ P PV A+
Sbjct: 3 ILFLGSPSFAVHALEALVAAG------HEIVGVVTQPDRPAGRDRRLTPPPVKIAAMAHN 56
Query: 112 FPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPL 171
P + PE + + L ALQPE+ + AAYG IL L+IPP+G +NIHPSLLPL
Sbjct: 57 LP---VLQPETLRDPTVVETLSALQPEVGVVAAYGEILRRAVLSIPPLGYLNIHPSLLPL 113
Query: 172 YRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGS 231
YRG PV A+ G TGV++ ++D+GP++A+ +++ +A +L LF G+
Sbjct: 114 YRGPTPVAGAILAGETVTGVTIMLLDPSMDSGPILAQAVVDLPPTARAGQLTDELFRIGA 173
Query: 232 ELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAGWP 291
+LL++ LP G ++ +PQD S+AT+ + E+ + + A+V+ RA+ WP
Sbjct: 174 DLLVQVLPRYARGE--IEPRPQDHSRATVTKMLKKEDGRIDWSLPAIVIERMTRAYDPWP 231
Query: 292 GTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDGITFKKDALVVPCGEC--TALE 349
G GQ L+II V TN V G + P + ALE
Sbjct: 232 GAYTFW------RGQ----PLRIIKAAVASADGTN-VPGTVIGRSGSGHPLVQTGSDALE 280
Query: 350 VLEVQLPGKKAVSAAAFWNGLRGQKLKV 377
++EVQ ++ +S +A+ G+ +++
Sbjct: 281 LIEVQPASRRPMSGSAWLAGVHADNIRL 308
>sp|B9EB94|FMT_MACCJ Methionyl-tRNA formyltransferase OS=Macrococcus caseolyticus
(strain JCSC5402) GN=fmt PE=3 SV=1
Length = 310
Score = 163 bits (413), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/325 (32%), Positives = 171/325 (52%), Gaps = 30/325 (9%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
++F+G+P S +L AL A V+ ++TQP R R + P PV A G
Sbjct: 4 IIFMGTPDFSAPILKALHEAHG-------VSLVITQPDKPVGRKRVLTPPPVKVMAESLG 56
Query: 112 FPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPL 171
++ PE D + AL P+L +TAA+G ILP + L+IP +G +N+H SLLP
Sbjct: 57 IE---VYQPESMKSDEAFERVHALSPDLIVTAAFGQILPERVLDIPRLGCINVHASLLPK 113
Query: 172 YRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVI--AREKMEVDDQIKAPELLVLLFSE 229
YRG AP+ +A+ G K +GV++ + V+ LDAG +I + +E++D + L L
Sbjct: 114 YRGGAPIHKAIINGEKYSGVTIMYMVKRLDAGDMIDSVQVPIEINDTVGT--LHDKLSVA 171
Query: 230 GSELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAG 289
G++LL+ +PS+L G+ PQ+DS+AT A ++ EE +++FD A+ +HN +R +
Sbjct: 172 GTDLLLEVMPSVLSGTN--NRTPQNDSEATFASNVSREEEYVTFDRTALEVHNHIRGLSP 229
Query: 290 WPGTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQT-NEVDGITFKKDALVVPCGECTAL 348
WP A +G+ +K+ + + E+ I K LV+ + A+
Sbjct: 230 WPVAFANF------DGKA----MKLWASEIAEGSGAPGEI--IQADKAGLVIATNDG-AV 276
Query: 349 EVLEVQLPGKKAVSAAAFWNGLRGQ 373
+ +Q GKK + AA+F G + Q
Sbjct: 277 RITSLQPAGKKRMDAASFVAGAKSQ 301
>sp|B8G4D0|FMT_CHLAD Methionyl-tRNA formyltransferase OS=Chloroflexus aggregans (strain
MD-66 / DSM 9485) GN=fmt PE=3 SV=1
Length = 309
Score = 163 bits (412), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 167/328 (50%), Gaps = 24/328 (7%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
++FLGSP +V+ LDAL A + + +VTQP R R++ P PV AL G
Sbjct: 3 IIFLGSPSYAVHALDALVAAG------YTIVGVVTQPDRPAGRDRRLTPPPVKVAALAHG 56
Query: 112 FPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPL 171
P + PE + + LRALQP++ + AAYG IL L IPP+G +NIHPSLLPL
Sbjct: 57 LP---VLQPETLRDPEVVETLRALQPDVGVVAAYGEILRRAVLEIPPLGYLNIHPSLLPL 113
Query: 172 YRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGS 231
YRG PV A+ G TGV++ +D+GP++A+ +++ + L LF G+
Sbjct: 114 YRGPTPVAGAILAGETVTGVTIMRLDPGMDSGPILAQAMVDLPPNARTGPLTDELFRLGA 173
Query: 232 ELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAGWP 291
LL+ LP G ++ +PQD S+AT+ + E+ + + A+V+ RA+ WP
Sbjct: 174 TLLVEVLPRYARGE--IELRPQDHSQATVTKMLKKEDGRIDWTLPAIVIERMTRAYDPWP 231
Query: 292 GTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDGITFKKDALVVPCGEC--TALE 349
GQ L+I++ V P + G+ + A P + ALE
Sbjct: 232 SAYTFW------RGQM----LRIMSAAVAPT-DASATPGMVIGRSAHGHPLVQTGSDALE 280
Query: 350 VLEVQLPGKKAVSAAAFWNGLRGQKLKV 377
++EVQ ++ +S AA+ G+ ++ +
Sbjct: 281 LVEVQPASRRPMSGAAWLAGVHAPEITL 308
>sp|Q82ZD8|FMT_ENTFA Methionyl-tRNA formyltransferase OS=Enterococcus faecalis (strain
ATCC 700802 / V583) GN=fmt PE=3 SV=1
Length = 313
Score = 162 bits (410), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/331 (32%), Positives = 166/331 (50%), Gaps = 35/331 (10%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
+VF+G+P SV +L++L A ++V A+VTQP R + + P+PV + AL
Sbjct: 4 IVFMGTPAFSVPILESLIEAG------YDVQAVVTQPDRPVGRKKVITPTPVKEAALKHN 57
Query: 112 FPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPL 171
L+ PE+ + + L P+L +TAA+G LP K L P +G +N+H SLLP
Sbjct: 58 L---LVLQPEKISGSPEMEKVIDLAPDLIVTAAFGQFLPEKILKAPKLGAINVHASLLPK 114
Query: 172 YRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGS 231
YRG APV ++ G KETGV++ V+ +DAG ++++ + + Q + L G
Sbjct: 115 YRGGAPVHYSIIEGEKETGVTIMEMVKKMDAGAILSQRAIPITKQDDVGTMFEKLSILGK 174
Query: 232 ELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAGWP 291
ELL+ LP ++ G + PQ + +AT +P IT E+ + + + A + N+VR WP
Sbjct: 175 ELLLETLPKLIAG--EITPIPQVEEEATFSPNITREQERIDWQKTAEAIDNQVRGMRPWP 232
Query: 292 -------GTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDGITFKKDALVVPCGE 344
GT K+ ++ L TT I I K AL + CGE
Sbjct: 233 TAFTTYQGTNWKI---------WAVTPLTETTTSAPGTI-------IQRSKKALWIACGE 276
Query: 345 CTALEVLEVQLPGKKAVSAAAFWNGLRGQKL 375
T L++ +Q GK ++ F NG+ GQ +
Sbjct: 277 GTVLQIDRLQPAGKGQLTIQEFLNGV-GQNV 306
>sp|A4XL81|FMT_CALS8 Methionyl-tRNA formyltransferase OS=Caldicellulosiruptor
saccharolyticus (strain ATCC 43494 / DSM 8903) GN=fmt
PE=3 SV=1
Length = 311
Score = 161 bits (407), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 105/331 (31%), Positives = 165/331 (49%), Gaps = 27/331 (8%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
+VF+G+P + N+L L F + +VTQP R + + P PV ++AL
Sbjct: 3 IVFMGTPDFAANILQKLIEEPQ-----FNIKLVVTQPDKPVGRKQILTPPPVKEFALK-- 55
Query: 112 FPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPL 171
F +++ G + F L+ + PE+ + AYG ILP + L IP G +N+H SLLP
Sbjct: 56 FNLNVVQPDRLKGNEEFFEVLKKINPEVIVVVAYGKILPKEILQIPKYGCINVHASLLPE 115
Query: 172 YRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGS 231
YRGAAP+QR L G TG+++ LD G ++ +E +E++ L L G+
Sbjct: 116 YRGAAPIQRVLMDGKNYTGITIMKMDEGLDTGDILLQEGIEIEQNDDVITLSKKLSELGA 175
Query: 232 ELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAGWP 291
+LLI L +I + + QD +KAT AP I +E +S+D AV ++N+ RA WP
Sbjct: 176 KLLIETLKNI----SNIVPVKQDATKATYAPPIDKKEGQISWDMSAVQIYNRFRALKIWP 231
Query: 292 GT----RAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDGITFKKDALVVPCGECTA 347
G + K+ I E++I N+Q + GI + V G
Sbjct: 232 GIFTIYKGKLL---------KIHEMEIAKLDNLENVQNGTILGINETGILVKVKDG---V 279
Query: 348 LEVLEVQLPGKKAVSAAAFWNGLRGQKLKVL 378
+++ E+QL G + +SA F NG + +K +L
Sbjct: 280 IKLKELQLEGGRKMSARDFVNGYKIKKGDIL 310
>sp|A7Z4J3|FMT_BACA2 Methionyl-tRNA formyltransferase OS=Bacillus amyloliquefaciens
(strain FZB42) GN=fmt PE=3 SV=1
Length = 317
Score = 161 bits (407), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 104/327 (31%), Positives = 168/327 (51%), Gaps = 20/327 (6%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
+VF+G+P SV VL L +EV +VTQP + R + + P PV A G
Sbjct: 4 IVFMGTPDFSVPVLRTLIEDG------YEVVGVVTQPDRPKGRKKIMTPPPVKAEAERHG 57
Query: 112 FPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPL 171
P + PE+ + + + +L+P+L +TAA+G ILP + L+ P G +N+H SLLP
Sbjct: 58 IP---VLQPEKVRLEEEIEKVLSLKPDLIVTAAFGQILPKQLLDGPKYGCINVHASLLPE 114
Query: 172 YRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGS 231
RG AP+ ++ G K+TGV++ + V LDAG +I++ ++E+D+ L L G+
Sbjct: 115 LRGGAPIHYSILQGKKKTGVTIMYMVEKLDAGDMISKIEVEIDETDNVGTLHDKLSIAGA 174
Query: 232 ELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAGWP 291
+LL +P+++ G+ +K QD+SKAT AP I E+ + + + ++N++R WP
Sbjct: 175 KLLSETVPNVISGN--IKPIKQDESKATYAPNIKREQERIDWAKPGEEIYNQIRGLNPWP 232
Query: 292 GTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDGITFKKDALVVPCGECTALEVL 351
+ NGQ V + +V + I +++ +VV G TAL +
Sbjct: 233 VAYTTL------NGQNMKV---WASEKVAAKTEAAPGTVIRTEQNGIVVASGNSTALLIT 283
Query: 352 EVQLPGKKAVSAAAFWNGLRGQKLKVL 378
E+Q GKK + F G Q VL
Sbjct: 284 ELQPAGKKRMKGEDFVRGKNVQPGDVL 310
>sp|B1L8W7|FMT_THESQ Methionyl-tRNA formyltransferase OS=Thermotoga sp. (strain RQ2)
GN=fmt PE=3 SV=1
Length = 313
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/325 (33%), Positives = 165/325 (50%), Gaps = 28/325 (8%)
Query: 52 LVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG 111
+VF+G+P+ + +L+ L F V +VTQP R RGRKV P+PV A
Sbjct: 3 IVFVGTPEFAAEILEHLIKNG------FNVVGVVTQPDKPRGRGRKVEPTPVKVVAEKHR 56
Query: 112 FPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPL 171
P PE + L LR++ P++ I A+YG IL K L++P +G NIHPSLLP
Sbjct: 57 VP---FIQPESINKKEALEFLRSVGPDVIIVASYGKILGEKVLSLPSLGCYNIHPSLLPK 113
Query: 172 YRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGS 231
YRGA+P+QR L+ G + TGV++ VR LDAGP+ + ++ +D +L L
Sbjct: 114 YRGASPIQRVLENGEERTGVTIYKMVRELDAGPIALQREISIDPFETFDQLEKRLIELSK 173
Query: 232 ELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFAGWP 291
E+ I L + G +K QD S+AT AP I E+ + F ++A + NK+RA+ P
Sbjct: 174 EMSIEFLEKLKVGDIELKE--QDHSRATYAPMIKKEDLIVDFSKDAESVKNKIRAYDSRP 231
Query: 292 GTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDGITFKKDALVVPCGECTAL-EV 350
G RA + N + + + I + + + G+ D G + +V
Sbjct: 232 GARAFLG-----NDEVKLFGVTAIDS-------SGDEPGLIHYIDREGAWIGTGKGMVKV 279
Query: 351 LEVQLPGKKAVSAAAFWNGLRGQKL 375
+QLPGKK ++ FW LR +L
Sbjct: 280 KYLQLPGKKKLT---FWE-LRNGRL 300
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 135,603,364
Number of Sequences: 539616
Number of extensions: 5662645
Number of successful extensions: 16003
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 795
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 13291
Number of HSP's gapped (non-prelim): 830
length of query: 378
length of database: 191,569,459
effective HSP length: 119
effective length of query: 259
effective length of database: 127,355,155
effective search space: 32984985145
effective search space used: 32984985145
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)