Query 048078
Match_columns 378
No_of_seqs 249 out of 1784
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 10:11:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048078.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048078hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tqq_A Methionyl-tRNA formyltr 100.0 7.6E-78 2.6E-82 584.7 38.8 302 48-371 1-303 (314)
2 3rfo_A Methionyl-tRNA formyltr 100.0 1.3E-77 4.5E-82 583.5 36.3 306 47-373 2-308 (317)
3 3q0i_A Methionyl-tRNA formyltr 100.0 2.1E-77 7.2E-82 582.3 36.5 302 48-371 6-308 (318)
4 1fmt_A Methionyl-tRNA FMet for 100.0 3.7E-77 1.3E-81 580.2 37.1 303 47-371 1-304 (314)
5 2bln_A Protein YFBG; transfera 100.0 1.1E-73 3.8E-78 553.9 35.4 298 50-373 1-299 (305)
6 2bw0_A 10-FTHFDH, 10-formyltet 100.0 3E-70 1E-74 534.7 34.4 293 47-368 20-329 (329)
7 1z7e_A Protein aRNA; rossmann 100.0 1.7E-65 5.8E-70 543.5 35.2 297 50-372 1-298 (660)
8 1zgh_A Methionyl-tRNA formyltr 100.0 6.2E-48 2.1E-52 363.5 19.8 176 124-320 65-243 (260)
9 2ywr_A Phosphoribosylglycinami 100.0 6.6E-45 2.3E-49 336.0 22.6 204 50-270 2-214 (216)
10 3av3_A Phosphoribosylglycinami 100.0 5.4E-45 1.8E-49 335.6 21.1 202 49-271 5-211 (212)
11 3p9x_A Phosphoribosylglycinami 100.0 1.7E-44 5.6E-49 330.9 21.7 185 49-246 2-191 (211)
12 3kcq_A Phosphoribosylglycinami 100.0 3.4E-44 1.2E-48 330.1 23.2 186 48-246 7-192 (215)
13 3n0v_A Formyltetrahydrofolate 100.0 6.9E-45 2.4E-49 348.4 18.2 228 1-246 26-276 (286)
14 3auf_A Glycinamide ribonucleot 100.0 5.8E-44 2E-48 332.0 23.2 191 41-246 14-211 (229)
15 3o1l_A Formyltetrahydrofolate 100.0 9.1E-45 3.1E-49 349.4 18.1 228 1-246 40-291 (302)
16 1meo_A Phosophoribosylglycinam 100.0 3.8E-44 1.3E-48 329.0 20.8 184 50-246 1-189 (209)
17 3da8_A Probable 5'-phosphoribo 100.0 6E-44 2.1E-48 328.4 22.0 183 47-246 10-199 (215)
18 1jkx_A GART;, phosphoribosylgl 100.0 6.3E-44 2.1E-48 328.4 21.5 184 50-246 1-189 (212)
19 4ds3_A Phosphoribosylglycinami 100.0 1.1E-43 3.7E-48 325.4 22.1 187 47-246 5-196 (209)
20 3lou_A Formyltetrahydrofolate 100.0 2.1E-44 7.1E-49 345.9 17.6 230 1-246 28-281 (292)
21 3tqr_A Phosphoribosylglycinami 100.0 1.3E-43 4.3E-48 326.3 22.1 186 47-246 3-193 (215)
22 3obi_A Formyltetrahydrofolate 100.0 5.1E-44 1.7E-48 342.8 15.3 228 1-246 24-276 (288)
23 3nrb_A Formyltetrahydrofolate 100.0 2.7E-44 9.4E-49 344.4 13.1 231 1-246 25-275 (287)
24 3rc1_A Sugar 3-ketoreductase; 95.5 0.011 3.8E-07 57.0 4.9 74 45-144 23-97 (350)
25 3ec7_A Putative dehydrogenase; 95.3 0.032 1.1E-06 53.9 7.6 87 36-145 10-96 (357)
26 4had_A Probable oxidoreductase 93.4 0.084 2.9E-06 50.5 5.6 74 46-144 20-94 (350)
27 3db2_A Putative NADPH-dependen 93.1 0.11 3.7E-06 49.9 5.9 72 48-145 4-75 (354)
28 3q2i_A Dehydrogenase; rossmann 93.1 0.16 5.4E-06 48.7 7.0 74 47-145 11-84 (354)
29 1h6d_A Precursor form of gluco 93.0 0.14 4.8E-06 50.9 6.6 79 46-145 80-159 (433)
30 3e9m_A Oxidoreductase, GFO/IDH 93.0 0.19 6.6E-06 47.7 7.3 73 48-145 4-76 (330)
31 4gmf_A Yersiniabactin biosynth 93.0 0.054 1.8E-06 53.0 3.4 70 47-144 5-74 (372)
32 4fb5_A Probable oxidoreductase 92.9 0.17 5.7E-06 48.6 6.8 79 46-144 22-102 (393)
33 3moi_A Probable dehydrogenase; 92.7 0.14 4.8E-06 49.9 6.0 72 48-145 1-73 (387)
34 3v5n_A Oxidoreductase; structu 92.6 0.25 8.7E-06 48.7 7.9 77 46-144 34-118 (417)
35 3dty_A Oxidoreductase, GFO/IDH 92.5 0.47 1.6E-05 46.3 9.6 76 47-144 10-93 (398)
36 3euw_A MYO-inositol dehydrogen 92.5 0.16 5.4E-06 48.5 5.9 72 48-145 3-74 (344)
37 3evn_A Oxidoreductase, GFO/IDH 91.7 0.17 5.7E-06 48.1 5.1 72 48-144 4-75 (329)
38 4hkt_A Inositol 2-dehydrogenas 91.7 0.24 8E-06 47.0 6.1 71 48-145 2-72 (331)
39 3mz0_A Inositol 2-dehydrogenas 91.5 0.3 1E-05 46.5 6.7 74 49-145 2-75 (344)
40 3btv_A Galactose/lactose metab 91.5 0.32 1.1E-05 48.3 7.0 75 48-144 19-97 (438)
41 4gqa_A NAD binding oxidoreduct 91.5 0.14 4.8E-06 50.2 4.4 78 47-144 24-104 (412)
42 3e18_A Oxidoreductase; dehydro 91.4 0.26 8.8E-06 47.5 6.1 70 48-144 4-73 (359)
43 1ydw_A AX110P-like protein; st 91.4 0.33 1.1E-05 46.6 6.8 77 48-147 5-82 (362)
44 3u3x_A Oxidoreductase; structu 91.3 0.42 1.4E-05 46.1 7.5 70 49-144 26-96 (361)
45 3a06_A 1-deoxy-D-xylulose 5-ph 91.1 0.87 3E-05 44.4 9.4 97 50-186 4-110 (376)
46 3cea_A MYO-inositol 2-dehydrog 91.0 0.41 1.4E-05 45.4 7.0 75 47-146 6-81 (346)
47 3fwz_A Inner membrane protein 90.9 0.49 1.7E-05 38.9 6.6 75 47-144 5-79 (140)
48 3ohs_X Trans-1,2-dihydrobenzen 90.9 0.29 9.9E-06 46.5 5.8 73 49-144 2-74 (334)
49 3ezy_A Dehydrogenase; structur 90.7 0.23 8E-06 47.3 5.0 72 49-145 2-73 (344)
50 2nvw_A Galactose/lactose metab 90.7 0.39 1.3E-05 48.4 6.8 76 47-144 37-116 (479)
51 3nkl_A UDP-D-quinovosamine 4-d 90.6 0.37 1.3E-05 39.4 5.6 93 47-145 2-101 (141)
52 3uuw_A Putative oxidoreductase 90.4 0.28 9.6E-06 45.9 5.2 70 48-145 5-75 (308)
53 1zh8_A Oxidoreductase; TM0312, 89.9 0.37 1.3E-05 46.0 5.6 74 47-144 16-90 (340)
54 1tlt_A Putative oxidoreductase 89.6 0.75 2.6E-05 43.2 7.5 70 48-145 4-74 (319)
55 2p2s_A Putative oxidoreductase 89.2 0.99 3.4E-05 42.7 8.1 71 48-144 3-74 (336)
56 4egs_A Ribose 5-phosphate isom 88.9 1.4 5E-05 38.3 8.2 102 33-145 18-121 (180)
57 3l4b_C TRKA K+ channel protien 88.7 0.52 1.8E-05 41.7 5.4 73 50-144 1-73 (218)
58 1lss_A TRK system potassium up 88.6 0.86 2.9E-05 36.5 6.2 74 49-144 4-77 (140)
59 4h3v_A Oxidoreductase domain p 88.5 0.2 6.7E-06 48.1 2.6 78 47-144 4-83 (390)
60 3ip3_A Oxidoreductase, putativ 88.1 0.71 2.4E-05 43.8 6.2 75 48-144 1-75 (337)
61 1nvm_B Acetaldehyde dehydrogen 87.4 1.8 6.1E-05 41.1 8.5 74 48-144 3-79 (312)
62 2ixa_A Alpha-N-acetylgalactosa 87.3 1.1 3.8E-05 44.3 7.3 80 46-144 17-99 (444)
63 3m2t_A Probable dehydrogenase; 86.7 0.66 2.3E-05 44.6 5.1 72 48-144 4-76 (359)
64 4ew6_A D-galactose-1-dehydroge 86.5 1.3 4.4E-05 42.1 7.0 39 45-88 21-60 (330)
65 2ho3_A Oxidoreductase, GFO/IDH 86.5 0.8 2.7E-05 43.1 5.5 73 49-147 1-73 (325)
66 3ic5_A Putative saccharopine d 85.0 1.9 6.4E-05 33.3 6.2 73 48-144 4-77 (118)
67 3llv_A Exopolyphosphatase-rela 84.4 1.4 4.8E-05 35.8 5.4 72 49-143 6-77 (141)
68 3i6i_A Putative leucoanthocyan 83.4 2.9 0.0001 39.2 7.9 81 48-145 9-92 (346)
69 2glx_A 1,5-anhydro-D-fructose 83.2 1.6 5.5E-05 40.9 6.0 70 50-145 1-71 (332)
70 3i23_A Oxidoreductase, GFO/IDH 83.1 1.3 4.4E-05 42.3 5.3 72 48-144 1-73 (349)
71 3l9w_A Glutathione-regulated p 82.8 1.6 5.6E-05 43.0 6.0 73 48-143 3-75 (413)
72 1xea_A Oxidoreductase, GFO/IDH 81.9 1.9 6.6E-05 40.4 5.9 69 49-144 2-71 (323)
73 4g65_A TRK system potassium up 81.6 1.4 4.7E-05 44.1 5.0 75 47-143 1-75 (461)
74 3c1a_A Putative oxidoreductase 81.2 0.65 2.2E-05 43.6 2.3 36 47-87 8-43 (315)
75 3pdi_A Nitrogenase MOFE cofact 81.0 1.8 6.1E-05 43.7 5.6 114 49-184 332-448 (483)
76 1r0k_A 1-deoxy-D-xylulose 5-ph 80.4 4.2 0.00014 39.8 7.9 53 49-115 4-57 (388)
77 3bio_A Oxidoreductase, GFO/IDH 80.2 2.4 8.2E-05 39.8 5.9 36 47-87 7-42 (304)
78 2i6u_A Otcase, ornithine carba 79.9 9.3 0.00032 36.1 9.9 101 48-174 147-270 (307)
79 4huj_A Uncharacterized protein 79.0 2.8 9.6E-05 37.1 5.7 68 49-145 23-90 (220)
80 3o9z_A Lipopolysaccaride biosy 78.7 4 0.00014 38.3 6.9 35 48-88 2-37 (312)
81 1pvv_A Otcase, ornithine carba 78.3 10 0.00035 36.0 9.6 102 48-175 154-277 (315)
82 3fhl_A Putative oxidoreductase 78.1 1.3 4.6E-05 42.3 3.5 36 48-88 4-40 (362)
83 3kux_A Putative oxidoreductase 78.0 2.6 8.7E-05 40.1 5.4 35 48-87 6-41 (352)
84 3gdo_A Uncharacterized oxidore 77.8 2.4 8.2E-05 40.5 5.2 68 48-144 4-73 (358)
85 3e82_A Putative oxidoreductase 77.4 3.7 0.00013 39.3 6.4 36 47-87 5-41 (364)
86 4ep1_A Otcase, ornithine carba 76.6 16 0.00054 35.1 10.5 102 47-174 177-299 (340)
87 3rjz_A N-type ATP pyrophosphat 76.0 8.5 0.00029 35.0 8.1 89 49-142 4-96 (237)
88 3upl_A Oxidoreductase; rossman 75.5 3.2 0.00011 41.4 5.5 38 46-88 20-57 (446)
89 1id1_A Putative potassium chan 75.4 7.2 0.00025 32.0 6.9 75 49-144 3-79 (153)
90 3oqb_A Oxidoreductase; structu 75.2 2.7 9.4E-05 40.3 4.8 74 47-144 4-91 (383)
91 1vlv_A Otcase, ornithine carba 74.2 12 0.0004 35.7 8.9 102 48-175 166-291 (325)
92 3otg_A CALG1; calicheamicin, T 74.2 9.8 0.00033 36.0 8.5 51 45-115 16-71 (412)
93 2ahr_A Putative pyrroline carb 73.3 3.3 0.00011 37.3 4.6 72 48-149 2-73 (259)
94 1f0y_A HCDH, L-3-hydroxyacyl-C 73.1 3.1 0.00011 38.6 4.5 41 37-83 3-43 (302)
95 3hzh_A Chemotaxis response reg 72.2 6.2 0.00021 32.0 5.7 82 46-145 33-120 (157)
96 2g1u_A Hypothetical protein TM 71.4 3.5 0.00012 34.1 4.0 33 47-85 17-49 (155)
97 3f4l_A Putative oxidoreductase 71.4 1.7 6E-05 41.2 2.3 38 48-89 1-39 (345)
98 3oti_A CALG3; calicheamicin, T 71.2 13 0.00045 35.2 8.6 17 127-143 121-137 (398)
99 3oa2_A WBPB; oxidoreductase, s 71.1 7.2 0.00025 36.6 6.6 35 48-88 2-37 (318)
100 3gd5_A Otcase, ornithine carba 70.7 29 0.00098 33.0 10.6 102 47-174 155-278 (323)
101 3mm4_A Histidine kinase homolo 70.5 16 0.00055 31.4 8.3 68 2-71 14-83 (206)
102 3rsc_A CALG2; TDP, enediyne, s 70.3 12 0.00043 35.4 8.2 53 43-115 14-71 (415)
103 3c85_A Putative glutathione-re 70.3 5.8 0.0002 33.5 5.3 75 48-144 38-113 (183)
104 4egb_A DTDP-glucose 4,6-dehydr 69.6 4.4 0.00015 37.7 4.7 86 46-145 21-107 (346)
105 2czc_A Glyceraldehyde-3-phosph 68.9 15 0.00051 34.8 8.3 49 49-113 2-50 (334)
106 3enk_A UDP-glucose 4-epimerase 68.7 24 0.00083 32.3 9.7 82 48-145 4-87 (341)
107 1rpn_A GDP-mannose 4,6-dehydra 68.3 8.7 0.0003 35.4 6.4 84 45-145 10-95 (335)
108 4fzr_A SSFS6; structural genom 67.6 15 0.00051 34.7 8.1 51 46-116 12-67 (398)
109 1xyg_A Putative N-acetyl-gamma 67.4 4.4 0.00015 39.1 4.2 37 46-87 13-50 (359)
110 2x4g_A Nucleoside-diphosphate- 67.2 8.1 0.00028 35.6 6.0 34 48-87 12-46 (342)
111 3u7q_B Nitrogenase molybdenum- 66.5 2.6 9E-05 42.9 2.5 121 49-184 364-499 (523)
112 2r6j_A Eugenol synthase 1; phe 66.2 26 0.00089 31.9 9.3 76 49-145 11-88 (318)
113 2pln_A HP1043, response regula 66.0 21 0.00073 27.6 7.6 90 36-146 5-96 (137)
114 3tpf_A Otcase, ornithine carba 65.9 23 0.0008 33.3 8.9 100 49-174 146-267 (307)
115 4etm_A LMPTP, low molecular we 65.5 47 0.0016 28.3 10.1 93 41-145 10-107 (173)
116 1qgu_B Protein (nitrogenase mo 65.2 2.6 8.8E-05 42.9 2.2 90 49-153 360-451 (519)
117 1b7g_O Protein (glyceraldehyde 65.2 16 0.00054 34.8 7.7 49 49-113 1-49 (340)
118 4id9_A Short-chain dehydrogena 65.0 15 0.00051 34.0 7.4 40 41-86 11-51 (347)
119 3u7q_A Nitrogenase molybdenum- 64.7 3.6 0.00012 41.5 3.1 114 49-184 348-465 (492)
120 3ing_A Homoserine dehydrogenas 64.6 3.9 0.00013 39.0 3.2 89 47-146 2-92 (325)
121 2vsy_A XCC0866; transferase, g 64.5 38 0.0013 33.5 10.8 86 44-144 200-290 (568)
122 2q1w_A Putative nucleotide sug 64.1 18 0.0006 33.5 7.7 83 42-145 14-98 (333)
123 3ruf_A WBGU; rossmann fold, UD 63.8 21 0.00073 33.0 8.2 78 49-145 25-109 (351)
124 1duv_G Octase-1, ornithine tra 63.3 28 0.00097 33.2 9.0 97 49-172 155-277 (333)
125 2y1e_A 1-deoxy-D-xylulose 5-ph 63.2 13 0.00044 36.3 6.5 99 49-186 21-130 (398)
126 1lc0_A Biliverdin reductase A; 63.1 6.1 0.00021 36.6 4.2 39 47-87 5-43 (294)
127 3aek_A Light-independent proto 62.1 5.5 0.00019 39.4 3.9 114 49-184 307-424 (437)
128 3keo_A Redox-sensing transcrip 61.7 8.4 0.00029 34.4 4.7 99 47-170 82-185 (212)
129 4dim_A Phosphoribosylglycinami 61.6 20 0.00067 34.2 7.7 74 48-144 6-79 (403)
130 3gt0_A Pyrroline-5-carboxylate 61.6 7.8 0.00027 34.7 4.5 70 49-148 2-75 (247)
131 3beo_A UDP-N-acetylglucosamine 61.5 34 0.0012 31.5 9.3 17 128-144 87-103 (375)
132 1mio_A Nitrogenase molybdenum 61.4 18 0.0006 36.8 7.6 126 49-184 335-504 (533)
133 2ef0_A Ornithine carbamoyltran 61.3 45 0.0015 31.2 9.9 38 135-174 212-266 (301)
134 2w37_A Ornithine carbamoyltran 61.2 34 0.0012 33.0 9.2 98 48-172 175-298 (359)
135 3abi_A Putative uncharacterize 60.8 12 0.00041 35.7 6.0 27 44-70 11-37 (365)
136 1mio_B Nitrogenase molybdenum 60.5 15 0.0005 36.5 6.7 86 49-149 312-398 (458)
137 3s2u_A UDP-N-acetylglucosamine 60.5 21 0.00072 33.8 7.6 81 48-146 1-102 (365)
138 3grf_A Ornithine carbamoyltran 60.2 39 0.0013 32.1 9.3 104 47-174 159-288 (328)
139 1dxh_A Ornithine carbamoyltran 60.0 26 0.00089 33.5 8.1 97 49-172 155-277 (335)
140 1ml4_A Aspartate transcarbamoy 59.9 38 0.0013 31.9 9.1 100 48-168 154-269 (308)
141 3csu_A Protein (aspartate carb 59.8 43 0.0015 31.5 9.5 97 48-168 153-268 (310)
142 2pzm_A Putative nucleotide sug 59.7 26 0.00087 32.3 7.9 83 41-145 12-97 (330)
143 3c1o_A Eugenol synthase; pheny 59.2 20 0.00067 32.8 7.0 80 48-145 3-86 (321)
144 1yb4_A Tartronic semialdehyde 59.1 16 0.00055 33.2 6.3 29 48-82 2-30 (295)
145 4e7p_A Response regulator; DNA 59.0 13 0.00043 29.7 5.0 93 36-145 7-103 (150)
146 1leh_A Leucine dehydrogenase; 58.9 24 0.00084 34.0 7.8 81 48-158 172-252 (364)
147 3tsa_A SPNG, NDP-rhamnosyltran 58.7 46 0.0016 31.0 9.7 18 127-144 105-122 (391)
148 1gy8_A UDP-galactose 4-epimera 58.3 51 0.0017 30.9 10.0 31 49-85 2-34 (397)
149 2gas_A Isoflavone reductase; N 57.7 23 0.00078 32.0 7.1 79 49-145 2-85 (307)
150 1t2a_A GDP-mannose 4,6 dehydra 57.5 15 0.0005 34.6 5.9 82 50-145 25-111 (375)
151 4ina_A Saccharopine dehydrogen 57.2 15 0.00053 35.6 6.1 76 50-144 2-84 (405)
152 3gpi_A NAD-dependent epimerase 56.6 12 0.00041 33.7 4.9 33 49-87 3-35 (286)
153 3oj0_A Glutr, glutamyl-tRNA re 56.6 8 0.00027 31.4 3.4 69 49-145 21-89 (144)
154 3tri_A Pyrroline-5-carboxylate 56.1 16 0.00054 33.6 5.7 23 49-71 3-25 (280)
155 3qvo_A NMRA family protein; st 56.0 6.6 0.00023 34.6 3.0 38 44-87 18-57 (236)
156 2dwc_A PH0318, 433AA long hypo 55.8 33 0.0011 33.2 8.2 36 48-89 18-53 (433)
157 3ijr_A Oxidoreductase, short c 54.9 57 0.0019 29.6 9.4 80 49-144 47-133 (291)
158 3r6d_A NAD-dependent epimerase 54.5 13 0.00043 32.2 4.5 30 50-85 5-37 (221)
159 1rkx_A CDP-glucose-4,6-dehydra 54.5 31 0.0011 31.9 7.6 78 49-145 9-89 (357)
160 1kjq_A GART 2, phosphoribosylg 54.3 36 0.0012 32.1 8.2 37 48-90 10-46 (391)
161 2f9f_A First mannosyl transfer 54.2 13 0.00044 30.9 4.4 92 38-144 12-105 (177)
162 3dhn_A NAD-dependent epimerase 53.7 17 0.00059 31.2 5.3 32 49-86 4-36 (227)
163 3slg_A PBGP3 protein; structur 52.9 16 0.00055 34.2 5.3 74 49-145 24-100 (372)
164 3e8x_A Putative NAD-dependent 52.9 12 0.0004 32.7 4.1 36 45-86 17-53 (236)
165 1qyc_A Phenylcoumaran benzylic 52.7 44 0.0015 30.0 8.2 79 49-145 4-86 (308)
166 2gek_A Phosphatidylinositol ma 52.6 18 0.00061 33.8 5.6 43 126-168 97-141 (406)
167 3llu_A RAS-related GTP-binding 52.5 7 0.00024 33.2 2.5 36 32-67 3-38 (196)
168 3doj_A AT3G25530, dehydrogenas 52.2 26 0.00087 32.5 6.5 31 46-82 18-48 (310)
169 3f6c_A Positive transcription 52.2 43 0.0015 25.5 7.1 79 49-145 1-83 (134)
170 1qyd_A Pinoresinol-lariciresin 52.2 23 0.0008 32.0 6.2 78 49-145 4-85 (313)
171 3dqp_A Oxidoreductase YLBE; al 51.8 14 0.00047 31.8 4.4 32 50-87 1-33 (219)
172 2cwd_A Low molecular weight ph 51.1 75 0.0026 26.5 8.8 86 48-146 3-93 (161)
173 1f06_A MESO-diaminopimelate D- 51.0 13 0.00044 34.9 4.2 36 48-88 2-37 (320)
174 3m2p_A UDP-N-acetylglucosamine 50.5 32 0.0011 31.2 6.9 69 49-145 2-71 (311)
175 2iuy_A Avigt4, glycosyltransfe 50.3 87 0.003 28.4 9.9 42 126-169 74-115 (342)
176 2iya_A OLEI, oleandomycin glyc 49.8 43 0.0015 31.8 8.0 40 129-169 102-141 (424)
177 1n7h_A GDP-D-mannose-4,6-dehyd 49.4 19 0.00066 33.8 5.3 81 50-145 29-115 (381)
178 1orr_A CDP-tyvelose-2-epimeras 49.2 39 0.0013 30.9 7.3 79 50-145 2-82 (347)
179 3qha_A Putative oxidoreductase 49.0 26 0.00089 32.2 6.0 30 49-84 15-44 (296)
180 3ew7_A LMO0794 protein; Q8Y8U8 48.9 23 0.0008 30.0 5.4 31 50-86 1-32 (221)
181 2axq_A Saccharopine dehydrogen 48.9 27 0.00093 34.7 6.5 74 49-144 23-96 (467)
182 2j6i_A Formate dehydrogenase; 48.1 1E+02 0.0035 29.3 10.3 109 48-193 163-281 (364)
183 2wm3_A NMRA-like family domain 47.7 70 0.0024 28.6 8.7 74 49-144 5-80 (299)
184 3gvc_A Oxidoreductase, probabl 47.5 41 0.0014 30.5 7.0 95 25-144 10-111 (277)
185 1ek6_A UDP-galactose 4-epimera 47.3 64 0.0022 29.5 8.5 87 49-145 2-90 (348)
186 3qhp_A Type 1 capsular polysac 47.3 28 0.00097 28.0 5.4 81 49-144 2-82 (166)
187 1vpd_A Tartronate semialdehyde 47.2 27 0.00092 31.7 5.7 27 49-81 5-31 (299)
188 4amu_A Ornithine carbamoyltran 47.2 41 0.0014 32.5 7.1 102 47-173 178-304 (365)
189 2dc1_A L-aspartate dehydrogena 46.8 27 0.00091 30.9 5.5 32 50-87 1-32 (236)
190 1zq6_A Otcase, ornithine carba 46.4 79 0.0027 30.4 9.0 58 104-174 243-320 (359)
191 1jf8_A Arsenate reductase; ptp 45.8 1.1E+02 0.0038 24.5 8.7 79 49-144 3-82 (131)
192 1np3_A Ketol-acid reductoisome 45.8 50 0.0017 31.0 7.6 23 49-71 16-38 (338)
193 2dt5_A AT-rich DNA-binding pro 45.5 12 0.0004 33.3 2.8 42 47-93 78-119 (211)
194 2vns_A Metalloreductase steap3 45.2 15 0.00051 32.2 3.5 33 45-83 24-56 (215)
195 2yjn_A ERYCIII, glycosyltransf 45.2 47 0.0016 31.8 7.5 36 45-86 16-56 (441)
196 3t38_A Arsenate reductase; low 44.3 1.3E+02 0.0046 26.5 9.6 85 47-147 79-164 (213)
197 4ekn_B Aspartate carbamoyltran 44.3 77 0.0026 29.7 8.4 96 47-168 149-264 (306)
198 3ius_A Uncharacterized conserv 44.0 29 0.00099 30.9 5.4 33 48-86 4-36 (286)
199 2nu8_A Succinyl-COA ligase [AD 44.0 55 0.0019 30.2 7.4 35 47-87 5-40 (288)
200 1yqg_A Pyrroline-5-carboxylate 43.7 30 0.001 30.7 5.4 46 50-113 1-47 (263)
201 2ph5_A Homospermidine synthase 43.6 9.4 0.00032 38.4 2.1 133 49-205 13-163 (480)
202 2o23_A HADH2 protein; HSD17B10 43.5 1.1E+02 0.0038 26.6 9.2 76 49-144 12-94 (265)
203 1p8a_A Protein tyrosine phosph 42.9 96 0.0033 25.3 8.0 81 48-145 3-88 (146)
204 2aef_A Calcium-gated potassium 42.8 17 0.00057 32.0 3.5 72 48-144 8-79 (234)
205 3eul_A Possible nitrate/nitrit 42.8 56 0.0019 25.6 6.5 86 43-144 9-97 (152)
206 2bgk_A Rhizome secoisolaricire 42.7 60 0.0021 28.7 7.3 31 48-84 15-46 (278)
207 2xdq_A Light-independent proto 42.6 19 0.00064 35.6 4.1 120 49-183 317-440 (460)
208 4dad_A Putative pilus assembly 42.6 17 0.00059 28.6 3.2 105 40-164 11-121 (146)
209 1udb_A Epimerase, UDP-galactos 42.5 1.1E+02 0.0039 27.6 9.4 80 50-145 1-82 (338)
210 3e48_A Putative nucleoside-dip 42.4 19 0.00063 32.4 3.8 34 50-88 1-35 (289)
211 4dio_A NAD(P) transhydrogenase 42.2 1E+02 0.0035 30.1 9.3 100 48-168 189-313 (405)
212 4etn_A LMPTP, low molecular we 42.2 1.2E+02 0.0041 26.0 8.8 84 46-145 31-119 (184)
213 3do5_A HOM, homoserine dehydro 42.1 66 0.0023 30.3 7.7 40 49-88 2-44 (327)
214 3rh0_A Arsenate reductase; oxi 41.9 1E+02 0.0035 25.5 8.0 81 49-145 20-101 (148)
215 3d1l_A Putative NADP oxidoredu 41.9 21 0.00073 31.9 4.1 48 49-113 10-57 (266)
216 3ouz_A Biotin carboxylase; str 41.6 16 0.00053 35.7 3.3 35 49-89 6-40 (446)
217 2hmt_A YUAA protein; RCK, KTN, 41.4 16 0.00053 28.8 2.8 29 50-84 7-35 (144)
218 1p9l_A Dihydrodipicolinate red 41.0 1.3E+02 0.0043 27.1 9.2 34 50-88 1-35 (245)
219 4e21_A 6-phosphogluconate dehy 41.0 29 0.001 33.1 5.1 28 49-82 22-49 (358)
220 1z45_A GAL10 bifunctional prot 40.5 96 0.0033 31.9 9.4 80 48-145 10-93 (699)
221 3pef_A 6-phosphogluconate dehy 40.4 44 0.0015 30.3 6.1 27 50-82 2-28 (287)
222 2dzd_A Pyruvate carboxylase; b 40.4 29 0.001 33.9 5.1 35 49-89 6-40 (461)
223 3ia7_A CALG4; glycosysltransfe 40.3 75 0.0026 29.4 7.9 17 127-143 93-109 (402)
224 1jl3_A Arsenate reductase; alp 40.3 69 0.0024 25.9 6.7 79 49-144 3-82 (139)
225 3sc6_A DTDP-4-dehydrorhamnose 40.1 35 0.0012 30.4 5.3 31 48-84 4-35 (287)
226 3va7_A KLLA0E08119P; carboxyla 40.0 26 0.00089 39.4 5.1 35 49-89 31-65 (1236)
227 2h78_A Hibadh, 3-hydroxyisobut 39.8 41 0.0014 30.6 5.8 28 49-82 3-30 (302)
228 2z1m_A GDP-D-mannose dehydrata 39.7 58 0.002 29.6 6.8 80 49-145 3-84 (345)
229 4a8t_A Putrescine carbamoyltra 39.6 70 0.0024 30.5 7.4 26 147-174 272-297 (339)
230 3dfz_A SIRC, precorrin-2 dehyd 39.3 35 0.0012 30.5 5.0 81 48-155 30-110 (223)
231 2w70_A Biotin carboxylase; lig 39.2 18 0.00063 35.2 3.4 34 50-89 3-36 (449)
232 3o38_A Short chain dehydrogena 39.2 94 0.0032 27.3 8.0 30 49-84 22-53 (266)
233 3mjf_A Phosphoribosylamine--gl 39.2 37 0.0012 33.1 5.6 22 49-70 3-24 (431)
234 2gf2_A Hibadh, 3-hydroxyisobut 39.1 41 0.0014 30.4 5.7 27 50-82 1-27 (296)
235 1x7d_A Ornithine cyclodeaminas 39.0 1.3E+02 0.0045 28.4 9.4 102 48-177 128-237 (350)
236 2i99_A MU-crystallin homolog; 38.6 54 0.0018 30.4 6.4 71 47-145 133-205 (312)
237 3aog_A Glutamate dehydrogenase 38.6 1.1E+02 0.0038 30.2 9.0 111 48-171 234-344 (440)
238 3ijp_A DHPR, dihydrodipicolina 38.5 19 0.00064 33.7 3.1 37 48-89 20-57 (288)
239 4f3y_A DHPR, dihydrodipicolina 38.4 23 0.00078 32.7 3.7 35 49-88 7-42 (272)
240 1u2p_A Ptpase, low molecular w 38.3 1.7E+02 0.0058 24.2 10.3 86 48-147 3-93 (163)
241 4gx0_A TRKA domain protein; me 38.1 31 0.0011 34.8 5.0 74 46-142 124-198 (565)
242 3hbm_A UDP-sugar hydrolase; PS 38.1 58 0.002 30.0 6.5 42 109-155 45-86 (282)
243 2c20_A UDP-glucose 4-epimerase 37.3 43 0.0015 30.4 5.5 73 50-145 2-76 (330)
244 3ctm_A Carbonyl reductase; alc 37.2 1.3E+02 0.0043 26.6 8.6 79 49-144 34-119 (279)
245 3ktd_A Prephenate dehydrogenas 37.1 39 0.0013 32.1 5.2 28 49-82 8-35 (341)
246 1v4v_A UDP-N-acetylglucosamine 37.0 1.5E+02 0.005 27.2 9.3 105 49-168 5-125 (376)
247 4a8p_A Putrescine carbamoyltra 36.8 98 0.0033 29.7 8.0 26 147-174 250-275 (355)
248 1ulz_A Pyruvate carboxylase N- 36.5 16 0.00056 35.5 2.5 35 49-89 2-36 (451)
249 2qk4_A Trifunctional purine bi 36.3 88 0.003 30.3 7.9 39 43-86 18-56 (452)
250 4amg_A Snogd; transferase, pol 36.1 1.3E+02 0.0043 27.9 8.7 48 128-176 120-167 (400)
251 2yy7_A L-threonine dehydrogena 35.7 1.2E+02 0.0041 27.0 8.3 74 49-145 2-77 (312)
252 3tjr_A Short chain dehydrogena 35.6 78 0.0027 28.8 7.0 30 49-84 31-61 (301)
253 3loq_A Universal stress protei 35.4 56 0.0019 29.3 5.9 65 102-167 218-291 (294)
254 2ozp_A N-acetyl-gamma-glutamyl 34.6 29 0.001 33.0 3.9 34 49-87 4-38 (345)
255 2c07_A 3-oxoacyl-(acyl-carrier 34.5 89 0.003 28.0 7.1 31 48-84 43-74 (285)
256 1lnq_A MTHK channels, potassiu 34.4 19 0.00066 33.6 2.6 71 49-144 115-185 (336)
257 1xq6_A Unknown protein; struct 34.1 1E+02 0.0034 26.4 7.2 34 48-85 3-37 (253)
258 3phh_A Shikimate dehydrogenase 33.9 96 0.0033 28.4 7.2 63 49-144 118-180 (269)
259 2vt3_A REX, redox-sensing tran 33.3 26 0.0009 31.1 3.1 42 48-93 84-125 (215)
260 3o3m_B Beta subunit 2-hydroxya 33.2 1.9E+02 0.0064 27.6 9.5 91 48-145 228-322 (385)
261 1iy8_A Levodione reductase; ox 33.2 1.2E+02 0.0041 26.7 7.7 31 48-84 12-43 (267)
262 3au8_A 1-deoxy-D-xylulose 5-ph 33.0 83 0.0028 31.4 6.8 59 48-117 76-135 (488)
263 1l7b_A DNA ligase; BRCT, autos 33.0 62 0.0021 24.6 4.8 71 47-135 8-81 (92)
264 4f2g_A Otcase 1, ornithine car 33.0 45 0.0016 31.4 4.9 26 147-174 244-269 (309)
265 3dzc_A UDP-N-acetylglucosamine 32.9 2E+02 0.007 27.1 9.8 109 45-168 21-145 (396)
266 1hdo_A Biliverdin IX beta redu 32.7 40 0.0014 28.1 4.1 31 50-86 4-35 (206)
267 3ggo_A Prephenate dehydrogenas 32.7 65 0.0022 29.9 6.0 23 49-71 33-55 (314)
268 1xgk_A Nitrogen metabolite rep 32.7 80 0.0027 29.5 6.7 32 49-86 5-37 (352)
269 3hdj_A Probable ornithine cycl 32.6 3E+02 0.01 25.4 11.9 104 47-178 119-225 (313)
270 1sb8_A WBPP; epimerase, 4-epim 32.5 1.3E+02 0.0045 27.5 8.1 77 49-145 27-111 (352)
271 3d4o_A Dipicolinate synthase s 32.5 1.8E+02 0.0062 26.3 9.0 94 48-170 154-247 (293)
272 1kew_A RMLB;, DTDP-D-glucose 4 32.4 48 0.0016 30.5 5.0 80 50-145 1-82 (361)
273 4dll_A 2-hydroxy-3-oxopropiona 32.2 46 0.0016 30.9 4.8 29 48-82 30-58 (320)
274 3sds_A Ornithine carbamoyltran 32.1 2.4E+02 0.0084 26.8 10.0 102 47-173 186-312 (353)
275 1l7d_A Nicotinamide nucleotide 31.9 2E+02 0.0069 27.3 9.5 24 48-71 171-194 (384)
276 3p2y_A Alanine dehydrogenase/p 31.6 1.1E+02 0.0038 29.6 7.5 100 48-168 183-303 (381)
277 1db3_A GDP-mannose 4,6-dehydra 31.6 84 0.0029 29.0 6.6 79 50-145 2-87 (372)
278 3uog_A Alcohol dehydrogenase; 31.4 39 0.0013 31.9 4.2 80 49-149 190-270 (363)
279 3uhf_A Glutamate racemase; str 31.3 2.7E+02 0.0094 25.3 9.9 92 47-163 22-115 (274)
280 3hv2_A Response regulator/HD d 31.2 1.2E+02 0.004 23.8 6.6 76 46-139 11-87 (153)
281 2gn4_A FLAA1 protein, UDP-GLCN 31.2 95 0.0033 28.8 6.9 76 47-145 19-100 (344)
282 1sny_A Sniffer CG10964-PA; alp 31.2 1.4E+02 0.0047 26.1 7.7 35 49-86 21-56 (267)
283 2tmg_A Protein (glutamate dehy 30.9 1.6E+02 0.0054 28.8 8.5 108 48-171 208-319 (415)
284 2pn1_A Carbamoylphosphate synt 30.8 1.5E+02 0.0052 26.8 8.2 37 47-89 2-39 (331)
285 2c5a_A GDP-mannose-3', 5'-epim 30.7 79 0.0027 29.6 6.3 34 48-87 28-62 (379)
286 2qv7_A Diacylglycerol kinase D 30.4 32 0.0011 32.3 3.3 61 82-144 27-88 (337)
287 1pl8_A Human sorbitol dehydrog 30.3 92 0.0032 29.0 6.7 77 49-146 172-252 (356)
288 3rof_A Low molecular weight pr 30.2 2.4E+02 0.0081 23.4 9.0 84 48-146 5-93 (158)
289 3ajr_A NDP-sugar epimerase; L- 30.1 1.6E+02 0.0055 26.2 8.1 69 51-145 1-71 (317)
290 1ff9_A Saccharopine reductase; 30.0 48 0.0017 32.6 4.7 23 49-71 3-25 (450)
291 1evy_A Glycerol-3-phosphate de 30.0 32 0.0011 32.4 3.3 34 44-83 9-43 (366)
292 1f0k_A MURG, UDP-N-acetylgluco 29.9 1.2E+02 0.0041 27.5 7.3 18 128-145 88-105 (364)
293 1pgj_A 6PGDH, 6-PGDH, 6-phosph 29.9 46 0.0016 33.0 4.6 27 50-82 2-28 (478)
294 2d0i_A Dehydrogenase; structur 29.8 1.7E+02 0.0058 27.3 8.4 154 47-245 144-311 (333)
295 2p5y_A UDP-glucose 4-epimerase 29.7 91 0.0031 28.0 6.4 73 50-145 1-75 (311)
296 3dfu_A Uncharacterized protein 29.7 29 0.001 31.3 2.8 31 48-84 5-35 (232)
297 2l17_A Synarsc, arsenate reduc 29.7 54 0.0019 26.5 4.3 81 49-146 4-86 (134)
298 1q0q_A 1-deoxy-D-xylulose 5-ph 29.6 1.5E+02 0.005 29.0 7.8 135 46-207 6-144 (406)
299 4ea9_A Perosamine N-acetyltran 29.6 1.6E+02 0.0055 25.2 7.7 35 48-88 11-45 (220)
300 3mtj_A Homoserine dehydrogenas 29.5 64 0.0022 31.9 5.5 40 48-87 9-52 (444)
301 1d1q_A Tyrosine phosphatase (E 29.5 2.4E+02 0.0081 23.3 9.5 87 47-146 5-97 (161)
302 3grp_A 3-oxoacyl-(acyl carrier 29.5 1.1E+02 0.0038 27.2 6.9 76 49-144 27-109 (266)
303 3okp_A GDP-mannose-dependent a 29.4 1E+02 0.0035 28.2 6.8 84 48-145 3-95 (394)
304 1js1_X Transcarbamylase; alpha 29.3 1.8E+02 0.0063 27.4 8.4 37 135-174 228-280 (324)
305 2v6g_A Progesterone 5-beta-red 29.3 56 0.0019 30.0 4.9 77 50-145 2-81 (364)
306 2rir_A Dipicolinate synthase, 29.2 1.6E+02 0.0054 26.8 7.9 92 47-167 155-246 (300)
307 2k6g_A Replication factor C su 29.2 75 0.0026 24.9 4.9 92 26-134 9-107 (109)
308 3qy9_A DHPR, dihydrodipicolina 29.1 60 0.0021 29.2 4.9 34 49-88 3-36 (243)
309 2ew2_A 2-dehydropantoate 2-red 29.0 42 0.0014 30.3 3.9 31 48-84 2-32 (316)
310 2q7x_A UPF0052 protein SP_1565 28.9 70 0.0024 30.3 5.4 38 48-91 3-40 (326)
311 3cnb_A DNA-binding response re 28.9 1.6E+02 0.0054 22.3 6.9 71 47-134 6-78 (143)
312 1rrv_A Glycosyltransferase GTF 28.8 1.8E+02 0.0061 27.3 8.5 31 50-86 1-36 (416)
313 1s8n_A Putative antiterminator 28.7 1.4E+02 0.0048 24.7 7.1 81 47-145 11-94 (205)
314 3cg0_A Response regulator rece 28.6 66 0.0023 24.6 4.5 81 47-145 7-91 (140)
315 1vl6_A Malate oxidoreductase; 28.5 2.2E+02 0.0077 27.5 9.1 104 47-171 190-297 (388)
316 3dlo_A Universal stress protei 28.5 49 0.0017 26.8 3.8 43 103-146 83-127 (155)
317 2r00_A Aspartate-semialdehyde 28.1 47 0.0016 31.4 4.1 37 48-87 2-39 (336)
318 3cz5_A Two-component response 28.1 1.3E+02 0.0044 23.4 6.3 81 48-145 4-88 (153)
319 1jw9_B Molybdopterin biosynthe 28.1 1.3E+02 0.0046 26.7 7.1 23 49-71 31-53 (249)
320 2ixd_A LMBE-related protein; h 28.0 1.4E+02 0.0047 26.7 7.1 89 49-144 3-105 (242)
321 4bas_A ADP-ribosylation factor 28.0 25 0.00084 29.2 1.9 33 35-67 3-35 (199)
322 3jvi_A Protein tyrosine phosph 28.0 2.5E+02 0.0085 23.2 8.3 86 48-146 3-93 (161)
323 3pdi_B Nitrogenase MOFE cofact 27.9 39 0.0013 33.5 3.6 107 49-184 313-429 (458)
324 2yv1_A Succinyl-COA ligase [AD 27.9 69 0.0023 29.6 5.1 32 49-86 13-45 (294)
325 3s40_A Diacylglycerol kinase; 27.8 38 0.0013 31.3 3.3 61 82-145 11-72 (304)
326 2ep5_A 350AA long hypothetical 27.8 40 0.0014 32.0 3.6 33 48-85 3-36 (350)
327 3f9i_A 3-oxoacyl-[acyl-carrier 27.6 1.2E+02 0.0042 26.1 6.7 80 45-144 10-92 (249)
328 3ot5_A UDP-N-acetylglucosamine 27.6 2.9E+02 0.0098 26.2 9.8 109 49-168 27-148 (403)
329 3rd5_A Mypaa.01249.C; ssgcid, 27.6 1.2E+02 0.0042 27.1 6.8 79 46-144 13-94 (291)
330 1omo_A Alanine dehydrogenase; 27.5 91 0.0031 29.0 6.0 100 48-177 124-228 (322)
331 3r0j_A Possible two component 27.4 83 0.0029 27.3 5.5 96 47-163 21-120 (250)
332 1cyd_A Carbonyl reductase; sho 27.4 1.8E+02 0.0062 24.8 7.7 75 49-145 7-85 (244)
333 3afn_B Carbonyl reductase; alp 27.3 1.7E+02 0.0058 25.1 7.5 32 49-86 7-39 (258)
334 2ehd_A Oxidoreductase, oxidore 27.1 1.5E+02 0.0051 25.2 7.1 75 49-144 5-86 (234)
335 4fgw_A Glycerol-3-phosphate de 27.1 30 0.001 33.7 2.5 35 37-71 22-56 (391)
336 2vpq_A Acetyl-COA carboxylase; 26.9 41 0.0014 32.7 3.5 34 50-89 2-35 (451)
337 3cky_A 2-hydroxymethyl glutara 26.8 61 0.0021 29.3 4.6 29 48-82 3-31 (301)
338 3awd_A GOX2181, putative polyo 26.6 1.5E+02 0.0051 25.7 7.0 31 49-85 13-44 (260)
339 1z82_A Glycerol-3-phosphate de 26.6 50 0.0017 30.7 4.0 30 47-82 12-41 (335)
340 4a2c_A Galactitol-1-phosphate 26.6 2.4E+02 0.0083 25.7 8.9 122 47-190 159-285 (346)
341 2hma_A Probable tRNA (5-methyl 26.6 63 0.0022 31.1 4.8 66 47-117 7-76 (376)
342 3d7l_A LIN1944 protein; APC893 26.5 1.2E+02 0.0041 25.2 6.2 31 48-85 2-33 (202)
343 2nwq_A Probable short-chain de 26.5 95 0.0032 27.8 5.8 29 50-84 22-51 (272)
344 2b4q_A Rhamnolipids biosynthes 26.4 1.6E+02 0.0056 26.1 7.4 30 49-84 29-59 (276)
345 3ezl_A Acetoacetyl-COA reducta 26.2 1.9E+02 0.0065 25.0 7.7 82 47-144 11-99 (256)
346 4b4o_A Epimerase family protei 26.1 62 0.0021 29.0 4.5 31 50-86 1-32 (298)
347 2wmy_A WZB, putative acid phos 26.0 2.7E+02 0.0091 22.7 9.9 83 49-146 8-91 (150)
348 2rh8_A Anthocyanidin reductase 25.9 1E+02 0.0035 27.9 6.0 34 49-88 9-43 (338)
349 1dih_A Dihydrodipicolinate red 25.9 30 0.001 31.8 2.2 38 47-89 3-41 (273)
350 3kyj_B CHEY6 protein, putative 25.8 1.8E+02 0.0063 22.2 6.9 77 44-137 8-87 (145)
351 3tlk_A Ferrienterobactin-bindi 25.8 1.5E+02 0.0052 27.0 7.2 81 46-145 43-124 (326)
352 2h17_A ADP-ribosylation factor 25.7 34 0.0012 28.1 2.4 37 34-70 6-43 (181)
353 3ihw_A Centg3; RAS, centaurin, 25.5 34 0.0012 28.5 2.4 36 36-71 7-43 (184)
354 2pk3_A GDP-6-deoxy-D-LYXO-4-he 25.5 1.7E+02 0.0057 26.2 7.4 71 48-145 11-83 (321)
355 1ys4_A Aspartate-semialdehyde 25.5 43 0.0015 31.8 3.3 33 48-85 7-40 (354)
356 3ip1_A Alcohol dehydrogenase, 25.4 69 0.0024 30.6 4.9 77 49-146 214-292 (404)
357 1yb1_A 17-beta-hydroxysteroid 25.4 2E+02 0.0068 25.3 7.8 31 49-85 31-62 (272)
358 1u8f_O GAPDH, glyceraldehyde-3 25.3 53 0.0018 31.1 3.9 33 49-86 3-35 (335)
359 1rrm_A Lactaldehyde reductase; 25.3 70 0.0024 30.6 4.8 87 50-149 10-101 (386)
360 2fek_A Low molecular weight pr 25.2 3E+02 0.01 23.0 9.0 83 49-146 22-105 (167)
361 1vj0_A Alcohol dehydrogenase, 25.1 1E+02 0.0036 29.0 6.1 75 50-145 197-276 (380)
362 3grc_A Sensor protein, kinase; 25.1 2.2E+02 0.0076 21.4 7.4 98 48-164 5-107 (140)
363 3bfj_A 1,3-propanediol oxidore 25.1 2.3E+02 0.0078 26.8 8.5 87 51-149 13-105 (387)
364 2h7i_A Enoyl-[acyl-carrier-pro 25.0 1.5E+02 0.0052 26.1 6.9 30 49-84 7-39 (269)
365 1vl0_A DTDP-4-dehydrorhamnose 24.9 1.2E+02 0.0043 26.7 6.3 34 45-84 8-42 (292)
366 1e3i_A Alcohol dehydrogenase, 24.9 1.4E+02 0.0049 27.9 7.0 74 50-145 197-274 (376)
367 3ek2_A Enoyl-(acyl-carrier-pro 24.8 2.4E+02 0.0083 24.4 8.2 82 45-144 10-100 (271)
368 3m1a_A Putative dehydrogenase; 24.8 1.6E+02 0.0055 26.0 7.0 77 49-145 5-88 (281)
369 3iup_A Putative NADPH:quinone 24.7 78 0.0027 30.0 5.0 76 49-145 171-249 (379)
370 3lp8_A Phosphoribosylamine-gly 24.7 1.6E+02 0.0056 28.5 7.5 25 46-70 18-42 (442)
371 2a9k_A RAS-related protein RAL 24.6 32 0.0011 28.0 1.9 32 39-70 8-40 (187)
372 3cps_A Glyceraldehyde 3-phosph 24.5 53 0.0018 31.5 3.8 33 49-86 17-49 (354)
373 3rp8_A Flavoprotein monooxygen 24.4 57 0.002 30.8 4.0 38 41-85 15-52 (407)
374 2zay_A Response regulator rece 24.3 2.2E+02 0.0076 21.6 7.1 25 47-71 6-30 (147)
375 3gqv_A Enoyl reductase; medium 24.1 1.8E+02 0.0062 27.2 7.5 74 48-146 164-241 (371)
376 2yrx_A Phosphoribosylglycinami 24.0 1.3E+02 0.0044 29.1 6.6 13 47-59 19-31 (451)
377 3pi7_A NADH oxidoreductase; gr 24.0 1.9E+02 0.0066 26.6 7.6 78 51-149 166-246 (349)
378 1p0f_A NADP-dependent alcohol 23.9 1.3E+02 0.0044 28.2 6.4 75 49-145 192-270 (373)
379 1oi7_A Succinyl-COA synthetase 23.9 1.7E+02 0.0057 26.9 7.0 35 47-87 5-40 (288)
380 2iyf_A OLED, oleandomycin glyc 23.9 2.4E+02 0.0082 26.3 8.4 18 128-145 96-113 (430)
381 1gad_O D-glyceraldehyde-3-phos 23.7 55 0.0019 31.0 3.7 33 49-86 1-33 (330)
382 2jl1_A Triphenylmethane reduct 23.7 1.1E+02 0.0036 27.0 5.5 73 50-145 1-75 (287)
383 3uko_A Alcohol dehydrogenase c 23.6 1.2E+02 0.0042 28.4 6.2 77 48-146 193-273 (378)
384 2wja_A Putative acid phosphata 23.6 3.2E+02 0.011 22.8 8.5 82 50-146 27-109 (168)
385 2xdq_B Light-independent proto 23.6 1E+02 0.0035 30.8 5.9 83 49-150 303-386 (511)
386 2o2z_A Hypothetical protein; s 23.4 79 0.0027 29.9 4.6 38 47-90 2-39 (323)
387 2gcg_A Glyoxylate reductase/hy 23.3 2.4E+02 0.0081 26.2 8.1 114 48-199 154-276 (330)
388 1zud_1 Adenylyltransferase THI 23.3 2.8E+02 0.0094 24.6 8.3 23 49-71 28-50 (251)
389 2rcy_A Pyrroline carboxylate r 23.2 1.7E+02 0.0057 25.6 6.8 24 48-71 3-26 (262)
390 1uls_A Putative 3-oxoacyl-acyl 23.2 2.2E+02 0.0075 24.6 7.5 74 49-144 5-85 (245)
391 2zyd_A 6-phosphogluconate dehy 23.2 69 0.0024 31.8 4.4 30 47-82 13-42 (480)
392 3cg4_A Response regulator rece 23.2 2.4E+02 0.0083 21.2 7.3 99 47-166 5-109 (142)
393 1wma_A Carbonyl reductase [NAD 23.2 1.3E+02 0.0046 26.0 6.0 31 49-85 4-36 (276)
394 3jv7_A ADH-A; dehydrogenase, n 23.0 99 0.0034 28.6 5.3 77 49-145 172-248 (345)
395 3k92_A NAD-GDH, NAD-specific g 23.0 2.2E+02 0.0074 27.9 7.9 165 48-240 220-394 (424)
396 3aek_B Light-independent proto 23.0 46 0.0016 33.6 3.1 118 49-185 280-405 (525)
397 2pv7_A T-protein [includes: ch 22.9 83 0.0028 28.7 4.7 103 49-171 21-127 (298)
398 3k31_A Enoyl-(acyl-carrier-pro 22.8 3.5E+02 0.012 24.1 9.0 78 49-144 30-116 (296)
399 3d3w_A L-xylulose reductase; u 22.7 2.5E+02 0.0085 23.9 7.7 74 49-144 7-84 (244)
400 3u9t_A MCC alpha, methylcroton 22.7 58 0.002 34.0 3.9 36 49-90 28-63 (675)
401 2nac_A NAD-dependent formate d 22.6 2.5E+02 0.0087 27.0 8.3 110 48-194 190-308 (393)
402 2zat_A Dehydrogenase/reductase 22.5 1.8E+02 0.0061 25.4 6.8 30 49-84 14-44 (260)
403 3qwb_A Probable quinone oxidor 22.5 74 0.0025 29.3 4.3 77 48-145 148-226 (334)
404 3v2g_A 3-oxoacyl-[acyl-carrier 22.5 1.4E+02 0.0047 26.6 6.1 80 49-144 31-117 (271)
405 1ks9_A KPA reductase;, 2-dehyd 22.5 75 0.0026 28.2 4.2 29 50-84 1-29 (291)
406 3h9u_A Adenosylhomocysteinase; 22.5 1.9E+02 0.0064 28.5 7.3 95 49-180 211-306 (436)
407 2dph_A Formaldehyde dismutase; 22.5 1E+02 0.0034 29.3 5.4 76 49-146 186-264 (398)
408 2hrz_A AGR_C_4963P, nucleoside 22.2 3.6E+02 0.012 24.1 9.1 24 48-71 13-37 (342)
409 1v8b_A Adenosylhomocysteinase; 22.2 1.9E+02 0.0066 28.7 7.5 89 47-167 255-344 (479)
410 2g76_A 3-PGDH, D-3-phosphoglyc 22.1 2.1E+02 0.0072 26.8 7.5 111 48-197 164-283 (335)
411 4gnr_A ABC transporter substra 22.1 1.2E+02 0.0042 27.5 5.8 45 103-147 161-207 (353)
412 2hq1_A Glucose/ribitol dehydro 22.0 2.3E+02 0.0078 24.2 7.3 30 49-84 5-35 (247)
413 3olq_A Universal stress protei 21.9 1.6E+02 0.0054 26.4 6.4 65 102-167 232-306 (319)
414 3g0o_A 3-hydroxyisobutyrate de 21.9 72 0.0024 29.1 4.0 29 48-82 6-34 (303)
415 2iz1_A 6-phosphogluconate dehy 21.7 82 0.0028 31.1 4.6 23 49-71 5-27 (474)
416 2f1k_A Prephenate dehydrogenas 21.7 71 0.0024 28.5 3.9 28 50-83 1-28 (279)
417 3s2e_A Zinc-containing alcohol 21.7 1.7E+02 0.0059 26.8 6.8 72 49-144 167-240 (340)
418 3gms_A Putative NADPH:quinone 21.6 1.3E+02 0.0043 27.8 5.7 76 49-145 145-222 (340)
419 1jay_A Coenzyme F420H2:NADP+ o 21.6 64 0.0022 27.4 3.4 29 50-84 1-30 (212)
420 1smk_A Malate dehydrogenase, g 21.6 73 0.0025 29.8 4.1 34 47-84 6-40 (326)
421 3hdg_A Uncharacterized protein 21.6 1E+02 0.0034 23.4 4.4 76 48-142 6-83 (137)
422 2rjn_A Response regulator rece 21.6 2.3E+02 0.0078 21.9 6.7 31 47-82 5-35 (154)
423 3oh8_A Nucleoside-diphosphate 21.6 88 0.003 31.0 4.9 34 49-88 147-181 (516)
424 3dtt_A NADP oxidoreductase; st 21.6 76 0.0026 28.0 4.0 32 46-83 16-47 (245)
425 2qv0_A Protein MRKE; structura 21.5 2.5E+02 0.0085 21.2 6.8 74 48-138 8-83 (143)
426 3e5r_O PP38, glyceraldehyde-3- 21.5 68 0.0023 30.4 3.8 33 49-86 3-35 (337)
427 1lld_A L-lactate dehydrogenase 21.5 73 0.0025 29.1 4.0 24 48-71 6-29 (319)
428 3k32_A Uncharacterized protein 21.4 1.4E+02 0.005 25.5 5.7 57 49-116 6-62 (203)
429 1ja9_A 4HNR, 1,3,6,8-tetrahydr 21.4 1.2E+02 0.004 26.6 5.3 31 49-85 21-52 (274)
430 1cdo_A Alcohol dehydrogenase; 21.4 1.9E+02 0.0064 27.0 7.0 75 49-145 193-271 (374)
431 3lyl_A 3-oxoacyl-(acyl-carrier 21.4 1.7E+02 0.0058 25.2 6.3 79 49-144 5-90 (247)
432 2qyt_A 2-dehydropantoate 2-red 21.3 59 0.002 29.5 3.3 24 48-71 7-30 (317)
433 3sxp_A ADP-L-glycero-D-mannohe 21.3 1.2E+02 0.0041 27.9 5.6 90 48-145 9-99 (362)
434 1w6u_A 2,4-dienoyl-COA reducta 21.3 3.4E+02 0.012 23.9 8.6 31 48-84 25-56 (302)
435 2lpm_A Two-component response 21.2 50 0.0017 26.3 2.4 83 47-146 6-89 (123)
436 3gg2_A Sugar dehydrogenase, UD 21.2 70 0.0024 31.5 4.0 30 49-84 2-31 (450)
437 3r5t_A Ferric vibriobactin ABC 21.2 1.7E+02 0.0058 26.4 6.5 75 47-145 21-95 (305)
438 3c24_A Putative oxidoreductase 21.0 90 0.0031 28.1 4.5 28 49-82 11-39 (286)
439 4e4t_A Phosphoribosylaminoimid 21.0 1.6E+02 0.0054 28.4 6.5 31 48-84 34-64 (419)
440 2i76_A Hypothetical protein; N 21.0 47 0.0016 30.0 2.5 22 49-70 2-23 (276)
441 1e3j_A NADP(H)-dependent ketos 20.8 2.1E+02 0.0072 26.4 7.2 77 49-146 169-250 (352)
442 3tpc_A Short chain alcohol deh 20.8 3.4E+02 0.012 23.4 8.3 31 49-85 7-38 (257)
443 1cf2_P Protein (glyceraldehyde 20.7 87 0.003 29.5 4.4 34 49-87 1-34 (337)
444 1n2s_A DTDP-4-, DTDP-glucose o 20.7 1.6E+02 0.0055 26.0 6.2 28 50-84 1-29 (299)
445 2jhf_A Alcohol dehydrogenase E 20.7 1.8E+02 0.006 27.2 6.6 75 49-145 192-270 (374)
446 2qxy_A Response regulator; reg 20.6 1.5E+02 0.0051 22.6 5.2 24 48-71 3-26 (142)
447 3m6i_A L-arabinitol 4-dehydrog 20.6 1.8E+02 0.0062 26.9 6.7 79 49-147 180-263 (363)
448 4g6h_A Rotenone-insensitive NA 20.6 48 0.0017 33.0 2.7 33 46-84 39-71 (502)
449 2p91_A Enoyl-[acyl-carrier-pro 20.5 3.8E+02 0.013 23.6 8.7 78 49-144 21-107 (285)
450 4hy3_A Phosphoglycerate oxidor 20.5 5.5E+02 0.019 24.3 10.2 157 48-246 175-342 (365)
451 2p0y_A Hypothetical protein LP 20.5 81 0.0028 30.1 4.1 37 48-90 9-45 (341)
452 1kol_A Formaldehyde dehydrogen 20.5 1.1E+02 0.0039 28.8 5.3 73 49-145 186-263 (398)
453 3nzo_A UDP-N-acetylglucosamine 20.4 1.6E+02 0.0055 27.9 6.4 77 49-145 35-121 (399)
454 1x13_A NAD(P) transhydrogenase 20.4 3E+02 0.01 26.3 8.4 95 48-164 171-289 (401)
455 3jyn_A Quinone oxidoreductase; 20.4 50 0.0017 30.5 2.6 78 48-146 140-219 (325)
456 3i1j_A Oxidoreductase, short c 20.4 3.7E+02 0.013 22.9 8.4 31 48-84 13-44 (247)
457 3is3_A 17BETA-hydroxysteroid d 20.4 2.3E+02 0.0079 24.9 7.1 80 49-144 18-104 (270)
458 2ebu_A Replication factor C su 20.3 3.1E+02 0.011 21.4 7.3 70 49-135 25-98 (112)
459 1vl8_A Gluconate 5-dehydrogena 20.3 2.4E+02 0.0082 24.8 7.2 30 49-84 21-51 (267)
460 3n74_A 3-ketoacyl-(acyl-carrie 20.3 2.9E+02 0.0099 23.8 7.7 77 49-145 9-92 (261)
461 2ekl_A D-3-phosphoglycerate de 20.2 3.8E+02 0.013 24.6 8.8 113 47-198 140-261 (313)
462 3me7_A Putative uncharacterize 20.2 2.8E+02 0.0094 22.5 7.1 58 49-114 29-92 (170)
463 1mx3_A CTBP1, C-terminal bindi 20.1 5.4E+02 0.018 24.1 12.9 156 48-245 167-336 (347)
464 2hun_A 336AA long hypothetical 20.1 1E+02 0.0035 27.9 4.7 33 49-85 3-36 (336)
465 1gdh_A D-glycerate dehydrogena 20.1 3.1E+02 0.011 25.3 8.1 156 47-245 144-312 (320)
466 1xg5_A ARPG836; short chain de 20.1 2.7E+02 0.0091 24.5 7.5 30 50-85 33-63 (279)
467 3uw1_A Ribose-5-phosphate isom 20.0 69 0.0023 29.0 3.3 45 51-113 34-78 (239)
468 4ibo_A Gluconate dehydrogenase 20.0 1.4E+02 0.0047 26.7 5.5 22 50-71 27-49 (271)
No 1
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=100.00 E-value=7.6e-78 Score=584.71 Aligned_cols=302 Identities=34% Similarity=0.512 Sum_probs=278.4
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
++|||+||||++|++++|++|+++ +++|++|||+||++.|||+++.+++|+++|+++||| ++++.+.++++
T Consensus 1 ~~mrivf~Gtp~fa~~~L~~L~~~------~~~v~~Vvt~pd~~~grg~~l~~~~v~~~A~~~gIp---v~~~~~~~~~~ 71 (314)
T 3tqq_A 1 MSLKIVFAGTPQFAVPTLRALIDS------SHRVLAVYTQPDRPSGRGQKIMESPVKEIARQNEIP---IIQPFSLRDEV 71 (314)
T ss_dssp CCCEEEEEECSGGGHHHHHHHHHS------SSEEEEEECCCC----------CCHHHHHHHHTTCC---EECCSCSSSHH
T ss_pred CCcEEEEECCCHHHHHHHHHHHHC------CCeEEEEEeCCCCccccCCccCCCHHHHHHHHcCCC---EECcccCCCHH
Confidence 479999999999999999999985 589999999999999999999999999999999999 88899998899
Q ss_pred HHHHHHhcCCcEEEEecCCCcCChhhhcCCCCceEEEccCCCCCCCCchHHHHHHHcCCcEEEEEEEEecCCCCCCCeeE
Q 048078 128 FLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIA 207 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~~~~ilp~~il~~~~~g~iNiHpSlLP~yRG~~pi~wai~~g~~~tGvTih~~~~~~D~G~Ii~ 207 (378)
+++.|+++++|++|+++|++|||+++|+.+++|+||+||||||+|||++|++|||++|+++||||+|+|++++|+||||+
T Consensus 72 ~~~~l~~~~~Dliv~~~~~~ilp~~il~~~~~g~iNiHpSlLP~yRG~~pi~~Ai~~G~~~tGvTih~~~~~~D~G~Ii~ 151 (314)
T 3tqq_A 72 EQEKLIAMNADVMVVVAYGLILPKKALNAFRLGCVNVHASLLPRWRGAAPIQRAILAGDRETGISIMQMNEGLDTGDVLA 151 (314)
T ss_dssp HHHHHHTTCCSEEEEESCCSCCCHHHHTSSTTCEEEEESSCTTTTBSSCHHHHHHHHTCSEEEEEEEECCSSSSCSCEEE
T ss_pred HHHHHHhcCCCEEEEcCcccccCHHHHhhCcCCEEEecCccccCCCCccHHHHHHHcCCCeeEEEEEeeecCCCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHHHHHHHHHhHcCCCCcccccCCCCCccccCCCCcccccCCCchhHHHHHHHHhcC
Q 048078 208 REKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAF 287 (378)
Q Consensus 208 Q~~~~I~~~dt~~~L~~kl~~~~~~ll~~~l~~l~~g~~~~~~~~Q~~~~~ty~~k~~~~d~~Idw~~~a~~I~~~iRA~ 287 (378)
|+.++|.++||..+|++|+.+++++++.++|+.+.+|.. .+.||+++.+||+||++++|++|||+++|++|+|+|||+
T Consensus 152 q~~~~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~~--~~~~Q~~~~~tya~ki~~~d~~Idw~~~a~~I~~~iRa~ 229 (314)
T 3tqq_A 152 KSACVISSEDTAADLHDRLSLIGADLLLESLAKLEKGDI--KLEKQDEASATYASKIQKQEALIDWRKSAVEIARQVRAF 229 (314)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHTCC--CCBCCCGGGCCBCCCCCGGGGBCCTTSBHHHHHHHHHHT
T ss_pred EEEEeeCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCC--CcCcCCCccccCCCCCCHHHheecccCCHHHHHHHHhcc
Confidence 999999999999999999999999999999999999986 789999999999999999999999999999999999999
Q ss_pred CCCCCcEEEEeeeecCCCCcceeEEEEEEeeecCCCCCCCCcEE-EEeCCeEEEEeCCCCeEEEEEEecCCCCccCHHHH
Q 048078 288 AGWPGTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDGI-TFKKDALVVPCGECTALEVLEVQLPGKKAVSAAAF 366 (378)
Q Consensus 288 ~p~pga~~~~~~~~~~~g~~~~~~v~i~~~~~~~~~~~~~pG~i-~~~~~~l~V~c~dg~~l~I~~lq~~gkk~~~a~~f 366 (378)
+||||||++++ |+ ++++++++..+......||+| ..++++++|+|+|| +|+|.++|++|||.|+|++|
T Consensus 230 ~P~Pga~~~~~------g~----~~ki~~a~~~~~~~~~~pG~v~~~~~~~l~V~~~dg-~l~i~~lq~~gkk~m~~~~f 298 (314)
T 3tqq_A 230 NPTPIAFTYFE------GQ----PMRIWRATVVDEKTDFEPGVLVDADKKGISIAAGSG-ILRLHQLQLPGKRVCSAGDF 298 (314)
T ss_dssp TTTTCCEEEET------TE----EEEEEEEEEECCCCSSCTTCEEEEETTEEEEECSBS-EEEEEEEECTTSCCEEHHHH
T ss_pred CCCCceEEEEC------CE----EEEEEEEEEecCCCCCCCcEEEEecCCEEEEEECCC-EEEEeEEEcCCCCccCHHHH
Confidence 99999999985 54 899999987765445689999 56788999999999 79999999999999999999
Q ss_pred HcccC
Q 048078 367 WNGLR 371 (378)
Q Consensus 367 ~~g~~ 371 (378)
+||++
T Consensus 299 ~~g~~ 303 (314)
T 3tqq_A 299 INAHG 303 (314)
T ss_dssp HHHHG
T ss_pred hccCc
Confidence 99987
No 2
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=100.00 E-value=1.3e-77 Score=583.50 Aligned_cols=306 Identities=30% Similarity=0.556 Sum_probs=288.8
Q ss_pred CCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcH
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGED 126 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~ 126 (378)
+++|||+||||++|++++|++|+++ +++|++|||+||++.|||+++.++||+++|+++||| ++++++.+++
T Consensus 2 ~~mmrIvf~Gtp~fa~~~L~~L~~~------~~~v~~Vvt~pd~~~gRg~~l~~~pv~~~A~~~gIp---v~~~~~~~~~ 72 (317)
T 3rfo_A 2 NAMIKVVFMGTPDFSVPVLRRLIED------GYDVIGVVTQPDRPVGRKKVLTPTPVKVEAEKHGIP---VLQPLRIREK 72 (317)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHT------TCEEEEEECCCCCEETTTTEECCCHHHHHHHHTTCC---EECCSCTTSH
T ss_pred CCceEEEEEeCCHHHHHHHHHHHHC------CCcEEEEEeCCCcccCCCcccCCCHHHHHHHHcCCC---EEccccCCCH
Confidence 4679999999999999999999985 599999999999999999999999999999999999 8888888888
Q ss_pred HHHHHHHhcCCcEEEEecCCCcCChhhhcCCCCceEEEccCCCCCCCCchHHHHHHHcCCcEEEEEEEEecCCCCCCCee
Q 048078 127 AFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVI 206 (378)
Q Consensus 127 ~~~~~l~~~~~Dliv~~~~~~ilp~~il~~~~~g~iNiHpSlLP~yRG~~pi~wai~~g~~~tGvTih~~~~~~D~G~Ii 206 (378)
++++.|+++++|++|+++|++|||+++|+.+++|+||+||||||+|||++|++|||++|+++||||+|+|++++|+||||
T Consensus 73 ~~~~~l~~~~~Dliv~~~y~~ilp~~~l~~~~~g~iNiHpSlLP~yRG~~pi~~Ai~~G~~~tGvTih~~~~~~DtG~Ii 152 (317)
T 3rfo_A 73 DEYEKVLALEPDLIVTAAFGQIVPNEILEAPKYGCINVHASLLPELRGGAPIHYAIMEGKEKTGITIMYMVEKLDAGDIL 152 (317)
T ss_dssp HHHHHHHHHCCSEEEESSCCSCCCHHHHHSSTTCEEEEESSCTTSSBSSCHHHHHHHTTCSEEEEEEEECCSSTTCSCEE
T ss_pred HHHHHHHhcCCCEEEEcCchhhCCHHHHhhCcCCEEEECCccCcCCCCcCHHHHHHHcCCCceEEEEEEEcccCCCCCEE
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHHHHhHcCCCCcccccCCCCCccccCCCCcccccCCCchhHHHHHHHHhc
Q 048078 207 AREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRA 286 (378)
Q Consensus 207 ~Q~~~~I~~~dt~~~L~~kl~~~~~~ll~~~l~~l~~g~~~~~~~~Q~~~~~ty~~k~~~~d~~Idw~~~a~~I~~~iRA 286 (378)
+|+.++|.++||..+|++|+..++++++.++|+.+.+|.. .++||+++.+||+||++++|++|||+++|++|+|+|||
T Consensus 153 ~q~~~~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~~--~~~~Q~~~~~tya~ki~~~d~~Idw~~~a~~i~~~iRa 230 (317)
T 3rfo_A 153 TQVEVEIEERETTGSLFDKLSEAGAHLLSKTVPLLIQGKL--EPIKQNEEEVTFAYNIKREQEKIDWTKTGEEVYNHIRG 230 (317)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCC--CCBCCCGGGCCBCCCCCHHHHBCCTTSCHHHHHHHHHH
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCC--ccccCCCCcceECCCCCHHHcccCHHHhHHHHHHHHhc
Confidence 9999999999999999999999999999999999999986 68999999999999999999999999999999999999
Q ss_pred CCCCCCcEEEEeeeecCCCCcceeEEEEEEeeecCCCCCCCCcEE-EEeCCeEEEEeCCCCeEEEEEEecCCCCccCHHH
Q 048078 287 FAGWPGTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDGI-TFKKDALVVPCGECTALEVLEVQLPGKKAVSAAA 365 (378)
Q Consensus 287 ~~p~pga~~~~~~~~~~~g~~~~~~v~i~~~~~~~~~~~~~pG~i-~~~~~~l~V~c~dg~~l~I~~lq~~gkk~~~a~~ 365 (378)
++||||||++++ |+ +++|++++..+......||+| ..++++++|+|+||.+|+|.++|++|||.|+|++
T Consensus 231 ~~p~Pga~~~~~------g~----~~ki~~a~~~~~~~~~~pG~i~~~~~~~l~V~~~dg~~l~i~~lq~~gkk~m~a~~ 300 (317)
T 3rfo_A 231 LNPWPVAYTTLA------GQ----VVKVWWGEKVPVTKSAEAGTIVAIEEDGFVVATGNETGVKITELQPSGKKRMSCSQ 300 (317)
T ss_dssp TTTTTCCEEEET------TE----EEEEEEEEEEECSSCCCTTBEEEECSSCEEECCSSSEEEEEEEEEETTSCCEEHHH
T ss_pred cCCCCceEEEEC------Ce----EEEEEEEEEecCCCCCCCcEEEEecCCeEEEEeCCCCEEEEEEEEcCCCCccCHHH
Confidence 999999999985 54 899999987665444679998 5677899999999933999999999999999999
Q ss_pred HHcccCCC
Q 048078 366 FWNGLRGQ 373 (378)
Q Consensus 366 f~~g~~~~ 373 (378)
|+||++.+
T Consensus 301 f~~g~~~~ 308 (317)
T 3rfo_A 301 FLRGTKPE 308 (317)
T ss_dssp HHHHCCCC
T ss_pred HhccCCCC
Confidence 99998754
No 3
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=100.00 E-value=2.1e-77 Score=582.28 Aligned_cols=302 Identities=31% Similarity=0.521 Sum_probs=278.6
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
++|||+||||++|++++|++|+++ +++|++|||+||++.|||+++.+++|+++|+++||| ++++.+.++++
T Consensus 6 ~~mrivf~Gt~~fa~~~L~~L~~~------~~~v~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIp---v~~~~~~~~~~ 76 (318)
T 3q0i_A 6 QSLRIVFAGTPDFAARHLAALLSS------EHEIIAVYTQPERPAGRGKKLTASPVKTLALEHNVP---VYQPENFKSDE 76 (318)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTS------SSEEEEEECCCC---------CCCHHHHHHHHTTCC---EECCSCSCSHH
T ss_pred cCCEEEEEecCHHHHHHHHHHHHC------CCcEEEEEcCCCCcccccccCCCCHHHHHHHHcCCC---EEccCcCCCHH
Confidence 379999999999999999999985 599999999999999999999999999999999999 88888888899
Q ss_pred HHHHHHhcCCcEEEEecCCCcCChhhhcCCCCceEEEccCCCCCCCCchHHHHHHHcCCcEEEEEEEEecCCCCCCCeeE
Q 048078 128 FLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIA 207 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~~~~ilp~~il~~~~~g~iNiHpSlLP~yRG~~pi~wai~~g~~~tGvTih~~~~~~D~G~Ii~ 207 (378)
+++.|+++++|++|+++|++|||+++|+.+++|+||+||||||+|||++|++|||++|+++||||+|+|++++|+||||+
T Consensus 77 ~~~~l~~~~~Dliv~~~y~~ilp~~~l~~~~~g~iNiHpSlLP~yRG~~pi~~Ai~~G~~~tGvTih~~~~~~D~G~Ii~ 156 (318)
T 3q0i_A 77 SKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILPRWRGAAPIQRSIWAGDSETGVTIMQMDVGLDTGDMLK 156 (318)
T ss_dssp HHHHHHTTCCSEEEESSCCSCCCHHHHTSSTTCEEEEESSSTTTTBSSCHHHHHHHHTCSEEEEEEEECCSSSSCSCEEE
T ss_pred HHHHHHhcCCCEEEEeCccccCCHHHHhhCcCCEEEeCCccCcCCCCcCHHHHHHHcCCCeEEEEEEEEcCCCCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHHHHHHHHHhHcCCCCcccccCCCCCccccCCCCcccccCCCchhHHHHHHHHhcC
Q 048078 208 REKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAF 287 (378)
Q Consensus 208 Q~~~~I~~~dt~~~L~~kl~~~~~~ll~~~l~~l~~g~~~~~~~~Q~~~~~ty~~k~~~~d~~Idw~~~a~~I~~~iRA~ 287 (378)
|+.++|.++||..+|++|+.+++++++.++|+.+.+|.. .+.||+++.+||++|++++|++|||+++|++|+|+|||+
T Consensus 157 q~~~~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~~--~~~~Q~~~~~tya~ki~~~d~~Idw~~~a~~I~~~iRa~ 234 (318)
T 3q0i_A 157 IATLPIEASDTSASMYDKLAELGPQALLECLQDIAQGTA--VAVKQDDGLANYAHKLSKEEARINWSDAATHIERCIRAF 234 (318)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHTCC--CCBCCCGGGCCBCCCCCHHHHBCCTTSBHHHHHHHHHHT
T ss_pred EEEEeeCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCC--ccccCCCCCCEECCCCCHHHceeccCCCHHHHHHHHhcc
Confidence 999999999999999999999999999999999999986 789999999999999999999999999999999999999
Q ss_pred CCCCCcEEEEeeeecCCCCcceeEEEEEEeeecCCCCCCCCcEE-EEeCCeEEEEeCCCCeEEEEEEecCCCCccCHHHH
Q 048078 288 AGWPGTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDGI-TFKKDALVVPCGECTALEVLEVQLPGKKAVSAAAF 366 (378)
Q Consensus 288 ~p~pga~~~~~~~~~~~g~~~~~~v~i~~~~~~~~~~~~~pG~i-~~~~~~l~V~c~dg~~l~I~~lq~~gkk~~~a~~f 366 (378)
+||||||++++ |+ +++|++++..+......||+| ..++++++|+|+|| +|+|.++|++|||.|+|++|
T Consensus 235 ~P~Pga~~~~~------g~----~~ki~~a~~~~~~~~~~pG~i~~~~~~~~~V~~~dg-~l~i~~lq~~gkk~m~a~~f 303 (318)
T 3q0i_A 235 NPWPMSHFEVA------EN----SIKVWQARVETRAVTQTPGTIIQADKSGIYVATGQD-VLVLESLQIPGKKALPVQDI 303 (318)
T ss_dssp TTTTCCEEEET------TE----EEEEEEEEEECCCCCSCTTBEEEEETTEEEEECSBS-EEEEEEEECTTSCCEEHHHH
T ss_pred CCCCceEEEEC------CE----EEEEEEEEEecCCCCCCCcEEEEEcCCEEEEEECCc-EEEEEEEEcCCCCcccHHHH
Confidence 99999999985 54 899999987765445689999 56788999999999 79999999999999999999
Q ss_pred HcccC
Q 048078 367 WNGLR 371 (378)
Q Consensus 367 ~~g~~ 371 (378)
+||++
T Consensus 304 ~~g~~ 308 (318)
T 3q0i_A 304 LNARA 308 (318)
T ss_dssp HHHHT
T ss_pred hccCc
Confidence 99987
No 4
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=100.00 E-value=3.7e-77 Score=580.16 Aligned_cols=303 Identities=33% Similarity=0.531 Sum_probs=281.1
Q ss_pred CCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcH
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGED 126 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~ 126 (378)
+++|||+||||++|++++|++|+++ +++|++|||+||++.|||+++.+++++++|+++||| ++++++.+++
T Consensus 1 s~~mrIvf~Gt~~fa~~~L~~L~~~------~~~i~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIp---v~~~~~~~~~ 71 (314)
T 1fmt_A 1 SESLRIIFAGTPDFAARHLDALLSS------GHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLP---VFQPVSLRPQ 71 (314)
T ss_dssp CCCCEEEEEECSHHHHHHHHHHHHT------TCEEEEEECCCCBC------CBCCHHHHHHHHTTCC---EECCSCSCSH
T ss_pred CCCCEEEEEecCHHHHHHHHHHHHC------CCcEEEEEeCCCCccccccccCcCHHHHHHHHcCCc---EEecCCCCCH
Confidence 3579999999999999999999985 589999999999999999999999999999999999 8888888889
Q ss_pred HHHHHHHhcCCcEEEEecCCCcCChhhhcCCCCceEEEccCCCCCCCCchHHHHHHHcCCcEEEEEEEEecCCCCCCCee
Q 048078 127 AFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVI 206 (378)
Q Consensus 127 ~~~~~l~~~~~Dliv~~~~~~ilp~~il~~~~~g~iNiHpSlLP~yRG~~pi~wai~~g~~~tGvTih~~~~~~D~G~Ii 206 (378)
++++.|+++++|++|+++|++|||+++|+.+++|+||+||||||+|||++|++|||++|+++||||+|+|++++|+||||
T Consensus 72 ~~~~~l~~~~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpSLLP~yRG~~pi~~Ai~~G~~~tGvTih~~~~~~D~G~Ii 151 (314)
T 1fmt_A 72 ENQQLVAELQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAAPIQRSLWAGDAETGVTIMQMDVGLDTGDML 151 (314)
T ss_dssp HHHHHHHHTTCSEEEEESCCSCCCHHHHHSSTTCEEEEESSSTTTTBSSCHHHHHHHHTCSEEEEEEEECCSSSSCSCEE
T ss_pred HHHHHHHhcCCCEEEEeeccccCCHHHHhhccCCEEEEcCCcCcCCCCcCHHHHHHHcCCCceEEEEEEEcccCcCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHHHHhHcCCCCcccccCCCCCccccCCCCcccccCCCchhHHHHHHHHhc
Q 048078 207 AREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRA 286 (378)
Q Consensus 207 ~Q~~~~I~~~dt~~~L~~kl~~~~~~ll~~~l~~l~~g~~~~~~~~Q~~~~~ty~~k~~~~d~~Idw~~~a~~I~~~iRA 286 (378)
.|+.++|.++||..+|++|+.+++++++.++|+.+.+|+. .+.||+++.+||+||++++|++|||+++|++|+|+|||
T Consensus 152 ~q~~~~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~~--~~~~Q~~~~~tya~ki~~~d~~Idw~~~a~~i~~~iRa 229 (314)
T 1fmt_A 152 YKLSCPITAEDTSGTLYDKLAELGPQGLITTLKQLADGTA--KPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRA 229 (314)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHTCC--CCBCCCGGGCCBCCCCCHHHHBCCTTSBHHHHHHHHHH
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCC--ceecCCccccccCCCCCHHHhhhcccccHHHHHHHHhc
Confidence 9999999999999999999999999999999999999986 68999999999999999999999999999999999999
Q ss_pred CCCCCCcEEEEeeeecCCCCcceeEEEEEEeeecCCCCCCCCcEE-EEeCCeEEEEeCCCCeEEEEEEecCCCCccCHHH
Q 048078 287 FAGWPGTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDGI-TFKKDALVVPCGECTALEVLEVQLPGKKAVSAAA 365 (378)
Q Consensus 287 ~~p~pga~~~~~~~~~~~g~~~~~~v~i~~~~~~~~~~~~~pG~i-~~~~~~l~V~c~dg~~l~I~~lq~~gkk~~~a~~ 365 (378)
++||||||++++ |+ ++++++++..+......||+| ..++++++|+|+|| +|+|.++|++|||.|+|.+
T Consensus 230 ~~p~Pga~~~~~------g~----~~ki~~a~~~~~~~~~~pG~i~~~~~~~~~V~~~dg-~l~i~~~q~~gkk~m~a~~ 298 (314)
T 1fmt_A 230 FNPWPMSWLEIE------GQ----PVKVWKASVIDTATNAAPGTILEANKQGIQVATGDG-ILNLLSLQPAGKKAMSAQD 298 (314)
T ss_dssp TTTTTCEEEEET------TE----EEEEEEEEEECCCCCSCTTBEEEEETTEEEEECSBS-EEEEEEEEETTSCCEEHHH
T ss_pred cCCCCceEEEEC------CE----EEEEEEEEEccCCCCCCCceEEEecCCEEEEEeCCC-EEEEEEEEcCCCCCCCHHH
Confidence 999999999985 54 899999987654334479998 56788999999999 7999999999999999999
Q ss_pred HHcccC
Q 048078 366 FWNGLR 371 (378)
Q Consensus 366 f~~g~~ 371 (378)
|+||++
T Consensus 299 ~~~g~~ 304 (314)
T 1fmt_A 299 LLNSRR 304 (314)
T ss_dssp HHHHSG
T ss_pred HhccCC
Confidence 999987
No 5
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=100.00 E-value=1.1e-73 Score=553.87 Aligned_cols=298 Identities=28% Similarity=0.474 Sum_probs=273.7
Q ss_pred ceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHHHH
Q 048078 50 KPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAFL 129 (378)
Q Consensus 50 ~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~~~ 129 (378)
|||+||||++|++++|++|+++ +++|++|||+++++.| ++.+++++++|+++||| ++++++.++++++
T Consensus 1 mrivf~gt~~fa~~~L~~L~~~------~~~i~~Vvt~~d~~~g---~~~~~~v~~~A~~~gIp---v~~~~~~~~~~~~ 68 (305)
T 2bln_A 1 MKTVVFAYHDMGCLGIEALLAA------GYEISAIFTHTDNPGE---KAFYGSVARLAAERGIP---VYAPDNVNHPLWV 68 (305)
T ss_dssp CEEEEEECHHHHHHHHHHHHHT------TCEEEEEECCCC---------CCCCHHHHHHHHTCC---EECCSCCCSHHHH
T ss_pred CEEEEEEcCHHHHHHHHHHHHC------CCcEEEEEcCCCCCCC---CcCccHHHHHHHHcCCC---EECCCcCCcHHHH
Confidence 7999999999999999999986 6899999999998776 67889999999999999 8888888888999
Q ss_pred HHHHhcCCcEEEEecCCCcCChhhhcCCCCceEEEccCCCCCCCCchHHHHHHHcCCcEEEEEEEEecCCCCCCCeeEEE
Q 048078 130 SNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIARE 209 (378)
Q Consensus 130 ~~l~~~~~Dliv~~~~~~ilp~~il~~~~~g~iNiHpSlLP~yRG~~pi~wai~~g~~~tGvTih~~~~~~D~G~Ii~Q~ 209 (378)
+.|+++++|++|+++|++|||+++|+.+++|+||+||||||+|||++|++|||++|+++||+|+|+|++++|+||||.|+
T Consensus 69 ~~l~~~~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpSLLP~yRG~~pi~~ai~~G~~~tGvTih~~~~~~D~G~Ii~q~ 148 (305)
T 2bln_A 69 ERIAQLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSLLPKYRGRAPLNWVLVNGETETGVTLHRMVKRADAGAIVAQL 148 (305)
T ss_dssp HHHHHTCCSEEEEESCCSCCCHHHHTTCTTCEEEEESSCTTTTEESCHHHHHHHTTCSEEEEEEEECCSSTTCSCEEEEE
T ss_pred HHHHhcCCCEEEEeccccccCHHHHhcCcCCEEEecCCcCcCCCCccHHHHHHHcCCCcEEEEEEEECCCccCCCeEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCHHHHHHHHHHHHHHHHHHHHHHhHcCCCCcccccCCCCCccccCCCCcccccCCCchhHHHHHHHHhcCC-
Q 048078 210 KMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFA- 288 (378)
Q Consensus 210 ~~~I~~~dt~~~L~~kl~~~~~~ll~~~l~~l~~g~~~~~~~~Q~~~~~ty~~k~~~~d~~Idw~~~a~~I~~~iRA~~- 288 (378)
.++|.++||..+|++|+..++++++.++|+.+.+|+. .+.||++..+||++|++++|++|||+++|++|+|+|||++
T Consensus 149 ~~~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~~--~~~~Q~~~~~tya~k~~~~d~~Idw~~~a~~i~~~iRa~~~ 226 (305)
T 2bln_A 149 RIAIAPDDIAITLHHKLCHAARQLLEQTLPAIKHGNI--LEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVAD 226 (305)
T ss_dssp EEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCC--CCBCCCGGGCCEECCCCGGGGBCCTTSBHHHHHHHHHHTCT
T ss_pred EEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCC--ceecCCccccccCCCCCHHHcEECCcCCHHHHHHHHhccCC
Confidence 9999999999999999999999999999999999986 6899999999999999999999999999999999999996
Q ss_pred CCCCcEEEEeeeecCCCCcceeEEEEEEeeecCCCCCCCCcEEEEeCCeEEEEeCCCCeEEEEEEecCCCCccCHHHHHc
Q 048078 289 GWPGTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDGITFKKDALVVPCGECTALEVLEVQLPGKKAVSAAAFWN 368 (378)
Q Consensus 289 p~pga~~~~~~~~~~~g~~~~~~v~i~~~~~~~~~~~~~pG~i~~~~~~l~V~c~dg~~l~I~~lq~~gkk~~~a~~f~~ 368 (378)
||||||++++ |+ ++++++++..+......||+|...+ +++|+|+|| +|+|.++|++|||.|+|.+|+|
T Consensus 227 p~Pga~~~~~------g~----~~ki~~a~~~~~~~~~~pG~i~~~~-~~~V~~~dg-~l~i~~~q~~gkk~m~~~~~~~ 294 (305)
T 2bln_A 227 PWPGAFSYVG------NQ----KFTVWSSRVHPHASKAQPGSVISVA-PLLIACGDG-ALEIVTGQAGDGITMQGSQLAQ 294 (305)
T ss_dssp TSCCEEEEET------TE----EEEEEEEEEECSCCCSCTTBEEEET-TEEEECSBS-EEEEEEEEETTSCCEEHHHHHH
T ss_pred CCCceEEEEC------CE----EEEEEEEEEccCCCCCCCCEEEEEC-CEEEEeCCc-eEEEEEEecCCCceecHHHHHh
Confidence 9999999885 54 8999999876543345799985434 499999999 7999999999999999999999
Q ss_pred ccCCC
Q 048078 369 GLRGQ 373 (378)
Q Consensus 369 g~~~~ 373 (378)
|++.+
T Consensus 295 g~~~~ 299 (305)
T 2bln_A 295 TLGLV 299 (305)
T ss_dssp HHTCC
T ss_pred cCCCC
Confidence 98653
No 6
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=100.00 E-value=3e-70 Score=534.70 Aligned_cols=293 Identities=24% Similarity=0.354 Sum_probs=267.7
Q ss_pred CCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCC--
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAG-- 124 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~-- 124 (378)
.++|||+|||+++|+..+|++|++. +++|++|||+||++ ++ +++++++|+++||| ++++++.+
T Consensus 20 ~~~mrIvf~G~~~fa~~~L~~L~~~------~~~i~~Vvt~pd~~-~~-----~~~v~~~A~~~gIp---v~~~~~~~~~ 84 (329)
T 2bw0_A 20 FQSMKIAVIGQSLFGQEVYCHLRKE------GHEVVGVFTVPDKD-GK-----ADPLGLEAEKDGVP---VFKYSRWRAK 84 (329)
T ss_dssp -CCCEEEEECCHHHHHHHHHHHHHT------TCEEEEEEECCCCS-SC-----CCHHHHHHHHHTCC---EEECSCCEET
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHC------CCeEEEEEeCCCcC-CC-----CCHHHHHHHHcCCC---EEecCccccc
Confidence 4579999999999999999999985 58999999999875 32 57899999999999 66666544
Q ss_pred ---cHHHHHHHHhcCCcEEEEecCCCcCChhhhcCCCCceEEEccCCCCCCCCchHHHHHHHcCCcEEEEEEEEecCCCC
Q 048078 125 ---EDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQGGAKETGVSLAFTVRALD 201 (378)
Q Consensus 125 ---~~~~~~~l~~~~~Dliv~~~~~~ilp~~il~~~~~g~iNiHpSlLP~yRG~~pi~wai~~g~~~tGvTih~~~~~~D 201 (378)
++++++.|++.++|++|+++|++|||+++|+.|++|+||+||||||+|||++|++|||++|+++||||+|+|++++|
T Consensus 85 ~~~~~~~~~~l~~~~~Dliv~a~y~~ilp~~il~~~~~g~iNiHpSLLP~yRG~~pi~~Ai~~G~~~tGvTvh~~~~~lD 164 (329)
T 2bw0_A 85 GQALPDVVAKYQALGAELNVLPFCSQFIPMEIISAPRHGSIIYHPSLLPRHRGASAINWTLIHGDKKGGFSIFWADDGLD 164 (329)
T ss_dssp TEECHHHHHHHHTTCCSEEEESSCSSCCCHHHHTCSTTCEEEEESSCTTTTBSSCHHHHHHHTTCSEEEEEEEECCSSSS
T ss_pred ccccHHHHHHHHhcCCCEEEEeehhhhCCHHHHhhCcCCEEEEcCCcCcCCCCcCHHHHHHHcCCCcEEEEEEEECCcCc
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeeEEEEEEeCCCCCHHHHHHH-HHHHHHHHHHHHHHHhHcCCCCcccccCCCCCccccCCCCcccccCCCchhHHHH
Q 048078 202 AGPVIAREKMEVDDQIKAPELLVL-LFSEGSELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVL 280 (378)
Q Consensus 202 ~G~Ii~Q~~~~I~~~dt~~~L~~k-l~~~~~~ll~~~l~~l~~g~~~~~~~~Q~~~~~ty~~k~~~~d~~Idw~~~a~~I 280 (378)
+||||.|+.++|.++||..+|++| ++.++++++.++|+.+.+|.. .+.||++..+||+||++++|++|||+++|++|
T Consensus 165 tG~Ii~Q~~v~I~~~dt~~~L~~r~l~~~~~~ll~~~l~~l~~g~~--~~~~Q~~~~~tya~ki~~~d~~Idw~~~a~~I 242 (329)
T 2bw0_A 165 TGDLLLQKECEVLPDDTVSTLYNRFLFPEGIKGMVQAVRLIAEGKA--PRLPQPEEGATYEGIQKKETAKINWDQPAEAI 242 (329)
T ss_dssp CSCEEEEEEEECCTTCCHHHHHHHTTTHHHHHHHHHHHHHHHHTCC--CCBCCCSTTCCBCCCCCGGGGBCCCSSCHHHH
T ss_pred CCCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCC--CcccCCccccccccCCCHHHcEEcccCCHHHH
Confidence 999999999999999999999999 589999999999999999986 68899999999999999999999999999999
Q ss_pred HHHHhcCCCCCCcEEEEeeeecCCCCcceeEEEEEEeeecCCCC-----------CCCCcEEEEeCCeEEEEeCCCCeEE
Q 048078 281 HNKVRAFAGWPGTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQ-----------TNEVDGITFKKDALVVPCGECTALE 349 (378)
Q Consensus 281 ~~~iRA~~p~pga~~~~~~~~~~~g~~~~~~v~i~~~~~~~~~~-----------~~~pG~i~~~~~~l~V~c~dg~~l~ 349 (378)
+|+|||++||||||++++ |+ ++++++++..+... ...||+| .+++++|+|+||.+|+
T Consensus 243 ~~~iRa~~p~Pga~t~~~------g~----~~ki~~a~~~~~~~~~~g~~~~~~~~~~pG~i--~~~~~~V~~~dg~~l~ 310 (329)
T 2bw0_A 243 HNWIRGNDKVPGAWTEAC------EQ----KLTFFNSTLNTSGLVPEGDALPIPGAHRPGVV--TKAGLILFGNDDKMLL 310 (329)
T ss_dssp HHHHHTTTTTTCCEEEET------TE----EEEEEEEESCCTTCCCCSEEECCTTCSSCEEE--ETTEEEEECTTSCEEE
T ss_pred HHHHhccCCCCceEEEEC------CE----EEEEEEEEEecccccccccccccccCCCCeEE--ECCeEEEEeCCCCEEE
Confidence 999999999999999985 54 89999997654321 2468987 5789999999996699
Q ss_pred EEEEecCCCCccCHHHHHc
Q 048078 350 VLEVQLPGKKAVSAAAFWN 368 (378)
Q Consensus 350 I~~lq~~gkk~~~a~~f~~ 368 (378)
|.+||++|||.|+|++|++
T Consensus 311 i~~lq~~gkk~m~a~~~~~ 329 (329)
T 2bw0_A 311 VKNIQLEDGKMILASNFFK 329 (329)
T ss_dssp EEEEECTTSCEEEGGGTTC
T ss_pred EeEEECCCCCcCCHHHHhC
Confidence 9999999999999999975
No 7
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=100.00 E-value=1.7e-65 Score=543.47 Aligned_cols=297 Identities=28% Similarity=0.476 Sum_probs=270.9
Q ss_pred ceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHHHH
Q 048078 50 KPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAFL 129 (378)
Q Consensus 50 ~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~~~ 129 (378)
|||+||||++|++++|++|+++ +++|++|||+++++.| ++.+++++++|+++||| ++++++.++++++
T Consensus 1 ~ri~~~~s~~~~~~~l~~l~~~------~~~i~~v~t~~~~~~~---~~~~~~~~~~a~~~~ip---~~~~~~~~~~~~~ 68 (660)
T 1z7e_A 1 MKTVVFAYHDMGCLGIEALLAA------GYEISAIFTHTDNPGE---KAFYGSVARLAAERGIP---VYAPDNVNHPLWV 68 (660)
T ss_dssp CEEEEEECHHHHHHHHHHHHHT------TCEEEEEECCCC-----------CCHHHHHHHHTCC---EECCSCTTSHHHH
T ss_pred CEEEEEEeCHHHHHHHHHHHhC------CCCEEEEEeCCCCCcc---CcCccHHHHHHHHcCCC---EeccCCCCcHHHH
Confidence 7999999999999999999986 6899999999988765 67789999999999999 8888888888999
Q ss_pred HHHHhcCCcEEEEecCCCcCChhhhcCCCCceEEEccCCCCCCCCchHHHHHHHcCCcEEEEEEEEecCCCCCCCeeEEE
Q 048078 130 SNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIARE 209 (378)
Q Consensus 130 ~~l~~~~~Dliv~~~~~~ilp~~il~~~~~g~iNiHpSlLP~yRG~~pi~wai~~g~~~tGvTih~~~~~~D~G~Ii~Q~ 209 (378)
+.|+++++|++|+++|++|||+++|+.+++|+||+||||||+|||++|++|||++|++++|+|+|+|++++|+||||.|+
T Consensus 69 ~~l~~~~~d~iv~~~~~~il~~~~l~~~~~~~iNiH~slLP~~rG~~p~~~ai~~g~~~~G~t~~~~~~~~D~G~ii~q~ 148 (660)
T 1z7e_A 69 ERIAQLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSLLPKYRGRAPLNWVLVNGETETGVTLHRMVKRADAGAIVAQL 148 (660)
T ss_dssp HHHHHHCCSEEEEESCCSCCCHHHHTTCTTCEEEEESSSTTTTCSSCHHHHHHHTTCSEEEEEEEECCSSTTTSCEEEEE
T ss_pred HHHHhcCCCEEEEcCcccccCHHHHhcCCCCeEEecCCcCCCCCCccHHHHHHHcCCCcEEEEEEEECCCccCCCeeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCHHHHHHHHHHHHHHHHHHHHHHhHcCCCCcccccCCCCCccccCCCCcccccCCCchhHHHHHHHHhcCC-
Q 048078 210 KMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHNKVRAFA- 288 (378)
Q Consensus 210 ~~~I~~~dt~~~L~~kl~~~~~~ll~~~l~~l~~g~~~~~~~~Q~~~~~ty~~k~~~~d~~Idw~~~a~~I~~~iRA~~- 288 (378)
.++|.++||.++|++|+.+++++++.++|+.+.+|+. .+.||++..+||+||++++|++|||+++|++|+|+|||++
T Consensus 149 ~~~i~~~dt~~~l~~~~~~~~~~~~~~~l~~~~~~~~--~~~~q~~~~~~~~~~~~~~~~~idw~~~a~~i~~~ira~~~ 226 (660)
T 1z7e_A 149 RIAIAPDDIAITLHHKLCHAARQLLEQTLPAIKHGNI--LEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVAD 226 (660)
T ss_dssp EEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTTCC--CCBCCCGGGCCCCCCCCGGGGBCCTTSBHHHHHHHHHHTCT
T ss_pred EEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCC--ceeeCCCccCccCCCCCHHHcEeCCCCCHHHHHHHHhccCC
Confidence 9999999999999999999999999999999999986 6899999999999999999999999999999999999995
Q ss_pred CCCCcEEEEeeeecCCCCcceeEEEEEEeeecCCCCCCCCcEEEEeCCeEEEEeCCCCeEEEEEEecCCCCccCHHHHHc
Q 048078 289 GWPGTRAKMAVVDDRNGQQSIVELKIITTRVCPNIQTNEVDGITFKKDALVVPCGECTALEVLEVQLPGKKAVSAAAFWN 368 (378)
Q Consensus 289 p~pga~~~~~~~~~~~g~~~~~~v~i~~~~~~~~~~~~~pG~i~~~~~~l~V~c~dg~~l~I~~lq~~gkk~~~a~~f~~ 368 (378)
||||||++++ |+ ++++++++..+......||+|...++ ++|+|+|| +|+|.++|++|||.|++.+|++
T Consensus 227 p~p~a~~~~~------~~----~~~i~~~~~~~~~~~~~pG~i~~~~~-~~v~~~~g-~~~i~~~q~~g~~~m~a~d~l~ 294 (660)
T 1z7e_A 227 PWPGAFSYVG------NQ----KFTVWSSRVHPHASKAQPGSVISVAP-LLIACGDG-ALEIVTGQAGDGITMQGSQLAQ 294 (660)
T ss_dssp TSCCEEEEET------TE----EEEEEECCEECCCCSSCTTSEEEETT-EEEECSBS-EEEECEEEETTSCCEEHHHHHH
T ss_pred CCCceEEEEC------CE----EEEEEEEEEccccCCCCCcEEEecCc-EEEEeCCC-eEEEEEeccCCCCcccHHHHHh
Confidence 9999999885 54 79999998765433357999854443 99999999 7999999999999999999999
Q ss_pred ccCC
Q 048078 369 GLRG 372 (378)
Q Consensus 369 g~~~ 372 (378)
|.+.
T Consensus 295 g~~l 298 (660)
T 1z7e_A 295 TLGL 298 (660)
T ss_dssp TTTC
T ss_pred hcCC
Confidence 9753
No 8
>1zgh_A Methionyl-tRNA formyltransferase; southeast collaboratory FO structural genomics, PSI, protein structure initiative, secsg; 2.05A {Clostridium thermocellum} SCOP: b.46.1.1 c.65.1.1
Probab=100.00 E-value=6.2e-48 Score=363.48 Aligned_cols=176 Identities=19% Similarity=0.290 Sum_probs=161.3
Q ss_pred CcHHHHHHHHhcCCcEEEEecCCCcCChhhhcCCCCceEEEccCCCCCCCCchHHHHHHHcCCcEEEEEEEEecCCCCCC
Q 048078 124 GEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQGGAKETGVSLAFTVRALDAG 203 (378)
Q Consensus 124 ~~~~~~~~l~~~~~Dliv~~~~~~ilp~~il~~~~~g~iNiHpSlLP~yRG~~pi~wai~~g~~~tGvTih~~~~~~D~G 203 (378)
+++++++.|++++||++|+++|++|||+++|+. +|+||+||||||+|||++|++|||++|++++|||+|+|++++|+|
T Consensus 65 ~~~~~~~~L~~~~pDliv~~~y~~ilp~~il~~--~g~iNiHpSLLP~yRG~~pi~~Ai~~G~~~tGvTih~~~~~lDtG 142 (260)
T 1zgh_A 65 KDELTFEKVKLINPEYILFPHWSWIIPKEIFEN--FTCVVFHMTDLPFGRGGSPLQNLIERGIKKTKISAIKVDGGIDTG 142 (260)
T ss_dssp GGGCCHHHHHHHCCSEEEESSCCSCCCHHHHTT--SCEEEEESSCTTTTEESCHHHHHHHTTCCEEEEEEEECCSSSSCS
T ss_pred CCHHHHHHHHhcCCCEEEEeccccccCHHHHcc--CCEEEEeCCcCCCCCCcCHHHHHHHcCCCcEEEEEEEEccCccCC
Confidence 345567889999999999999999999999996 689999999999999999999999999999999999999999999
Q ss_pred CeeEEEEEEeCCCCCHHHHHHHHHHHHH-HHHHHHHHHhHcCCCCcccccCCCCCccccCCCCcccccCCCchhHHHHHH
Q 048078 204 PVIAREKMEVDDQIKAPELLVLLFSEGS-ELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWLSFDEEAVVLHN 282 (378)
Q Consensus 204 ~Ii~Q~~~~I~~~dt~~~L~~kl~~~~~-~ll~~~l~~l~~g~~~~~~~~Q~~~~~ty~~k~~~~d~~Idw~~~a~~I~~ 282 (378)
|||+|+.++|. ||..+|++|+.++++ +++.+++ +|+. .+.||+ ..++|++|++++|+.|||+++|++|+|
T Consensus 143 ~Ii~Q~~v~I~--dt~~~L~~rl~~~~~~~ll~~~~----~g~~--~~~pQ~-~~~ty~~k~~k~d~~Idw~~~a~~I~~ 213 (260)
T 1zgh_A 143 DIFFKRDLDLY--GTAEEIFMRASKIIFNDMIPELL----TKRP--VPQKQE-GEATVFQRRKPEQSEISPDFDLEKIYD 213 (260)
T ss_dssp CEEEEEEEECC--SCHHHHHHHHHHHHHHTHHHHHH----HHCC--CCBCCC-SCCCEECCCCGGGGBCCTTSCHHHHHH
T ss_pred CeEEEEEEecc--CCHHHHHHHHHHHHHHHHHHHHH----cCCC--cceeCC-CCceeeecCCHHHcEECcccCHHHHHH
Confidence 99999999999 899999999999999 8876654 4555 678998 678999999999999999999999999
Q ss_pred HHhcCC--CCCCcEEEEeeeecCCCCcceeEEEEEEeeec
Q 048078 283 KVRAFA--GWPGTRAKMAVVDDRNGQQSIVELKIITTRVC 320 (378)
Q Consensus 283 ~iRA~~--p~pga~~~~~~~~~~~g~~~~~~v~i~~~~~~ 320 (378)
+|||++ ||||||++++ |+ +++|++++..
T Consensus 214 ~IRa~~~~p~PgA~t~~~------g~----~~ki~~a~~~ 243 (260)
T 1zgh_A 214 YIRMLDGEGYPRAFIKYG------KY----RLEFSRASMK 243 (260)
T ss_dssp HHHHTCSTTCCCCEEEET------TE----EEEEEEEEEE
T ss_pred HHHhhCCCCCCcEEEEEC------CE----EEEEEEEEEc
Confidence 999997 9999999885 54 8999999764
No 9
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=100.00 E-value=6.6e-45 Score=336.04 Aligned_cols=204 Identities=19% Similarity=0.251 Sum_probs=176.2
Q ss_pred ceEEEE--ecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCC---
Q 048078 50 KPLVFL--GSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAG--- 124 (378)
Q Consensus 50 ~rIvf~--Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~--- 124 (378)
+||+|| |+++++..+|++|.+.. .+++|++|||+++++ .++++|+++|||+. ++++.+.+
T Consensus 2 ~rI~vl~SG~g~~~~~~l~~l~~~~----~~~~i~~Vvs~~~~~----------~~~~~A~~~gIp~~-~~~~~~~~~r~ 66 (216)
T 2ywr_A 2 LKIGVLVSGRGSNLQAIIDAIESGK----VNASIELVISDNPKA----------YAIERCKKHNVECK-VIQRKEFPSKK 66 (216)
T ss_dssp EEEEEEECSCCHHHHHHHHHHHTTS----SCEEEEEEEESCTTC----------HHHHHHHHHTCCEE-ECCGGGSSSHH
T ss_pred CEEEEEEeCCcHHHHHHHHHHHhCC----CCCeEEEEEeCCCCh----------HHHHHHHHcCCCEE-EeCcccccchh
Confidence 699999 77778888888887631 135999999998754 57899999999943 22444443
Q ss_pred --cHHHHHHHHhcCCcEEEEecCCCcCChhhhcCCCCceEEEccCCCCCCCCchHHHHHHHcCCcEEEEEEEEecCCCCC
Q 048078 125 --EDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQGGAKETGVSLAFTVRALDA 202 (378)
Q Consensus 125 --~~~~~~~l~~~~~Dliv~~~~~~ilp~~il~~~~~g~iNiHpSlLP~yRG~~pi~wai~~g~~~tGvTih~~~~~~D~ 202 (378)
++++++.|++.++|++|+++|++|||+++|+.+++++||+||||||+|||++|++|||++|++++|+|+|+|++++|+
T Consensus 67 ~~~~~~~~~l~~~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~ai~~G~~~tGvTvh~v~~~~D~ 146 (216)
T 2ywr_A 67 EFEERMALELKKKGVELVVLAGFMRILSHNFLKYFPNKVINIHPSLIPAFQGLHAQKQAVEFGVKFSGCTVHIVDESVDA 146 (216)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSCCSCCCHHHHTTSTTCEEEEESSCTTTTCSTTHHHHHHHHTCSEEEEEEEECCSSSSC
T ss_pred hhhHHHHHHHHhcCCCEEEEeCchhhCCHHHHhhccCCeEEEcCCcCcCCCCccHHHHHHHcCCCeEEEEEEEEcccCCC
Confidence 477889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHHHHhHcCCCCcccccCCC--CCccccCCCCccccc
Q 048078 203 GPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPQDD--SKATLAPKITTEESW 270 (378)
Q Consensus 203 G~Ii~Q~~~~I~~~dt~~~L~~kl~~~~~~ll~~~l~~l~~g~~~~~~~~Q~~--~~~ty~~k~~~~d~~ 270 (378)
||||.|+.++|.++||.++|++|+.+++.+++.++|+.+.+|+. ....+.. ...+|++.++.+|..
T Consensus 147 G~Ii~q~~~~i~~~dt~~~L~~rl~~~~~~ll~~~l~~~~~g~~--~~~~~~~~~~~~~y~~~P~~~~l~ 214 (216)
T 2ywr_A 147 GPVIVQAVVPVLPEDDENTLADRILKWEHKILPQTVQWFAQDRI--IIDGRKVIVKDATYGTLPVNPALE 214 (216)
T ss_dssp SCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEETTEEEETTCCCSCSSEESCCS
T ss_pred CCEEEEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCC--eecCCeeEEeCCCCCCCCChHHhh
Confidence 99999999999999999999999999999999999999999875 2222211 357898888877643
No 10
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=100.00 E-value=5.4e-45 Score=335.65 Aligned_cols=202 Identities=25% Similarity=0.332 Sum_probs=159.8
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCC----
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAG---- 124 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~---- 124 (378)
++.|+|+|+++++..+|++|.+. ..+++|++|||+++++ +++++|+++|||+. ++.+.+.+
T Consensus 5 ki~vl~sG~g~~~~~~l~~l~~~----~l~~~I~~Vit~~~~~----------~v~~~A~~~gIp~~-~~~~~~~~~~~~ 69 (212)
T 3av3_A 5 RLAVFASGSGTNFQAIVDAAKRG----DLPARVALLVCDRPGA----------KVIERAARENVPAF-VFSPKDYPSKAA 69 (212)
T ss_dssp EEEEECCSSCHHHHHHHHHHHTT----CCCEEEEEEEESSTTC----------HHHHHHHHTTCCEE-ECCGGGSSSHHH
T ss_pred EEEEEEECCcHHHHHHHHHHHhC----CCCCeEEEEEeCCCCc----------HHHHHHHHcCCCEE-EeCcccccchhh
Confidence 44456668888888888887653 1358999999987653 78999999999944 23444333
Q ss_pred -cHHHHHHHHhcCCcEEEEecCCCcCChhhhcCCCCceEEEccCCCCCCCCchHHHHHHHcCCcEEEEEEEEecCCCCCC
Q 048078 125 -EDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQGGAKETGVSLAFTVRALDAG 203 (378)
Q Consensus 125 -~~~~~~~l~~~~~Dliv~~~~~~ilp~~il~~~~~g~iNiHpSlLP~yRG~~pi~wai~~g~~~tGvTih~~~~~~D~G 203 (378)
++++++.|++++||++|+++|++|||+++|+.+++++||+||||||+|||++|++|||++|++++|+|+|+|++++|+|
T Consensus 70 ~~~~~~~~l~~~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~~~D~G 149 (212)
T 3av3_A 70 FESEILRELKGRQIDWIALAGYMRLIGPTLLSAYEGKIVNIHPSLLPAFPGKDAIGQAYRAGVSETGVTVHYVDEGMDTG 149 (212)
T ss_dssp HHHHHHHHHHHTTCCEEEESSCCSCCCHHHHHHTTTCEEEEESSCTTSSCSTTHHHHHHHHTCSEEEEEEEECCSSSSCS
T ss_pred hHHHHHHHHHhcCCCEEEEchhhhhCCHHHHhhhcCCEEEEecCcCCCCCCcCHHHHHHHcCCCeEEEEEEEECCCCCCC
Confidence 4578899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeEEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHHHHhHcCCCCcccccCCCCCccccCCCCcccccC
Q 048078 204 PVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSARVKAQPQDDSKATLAPKITTEESWL 271 (378)
Q Consensus 204 ~Ii~Q~~~~I~~~dt~~~L~~kl~~~~~~ll~~~l~~l~~g~~~~~~~~Q~~~~~ty~~k~~~~d~~I 271 (378)
|||.|+.++|.++||.++|++|+.+.+.+++.++++.+.+|+. |.++..+++.+.+.+|.++
T Consensus 150 ~Ii~Q~~v~I~~~dt~~~L~~r~~~~~~~ll~~~l~~~~~g~~------~~~~~~~~~~~~t~~~~~~ 211 (212)
T 3av3_A 150 PVIAQRVVPIVPGEPIEALEERIHQVEHELYPTVLRMLLGEKE------QQEERIENDGSETSIDQRV 211 (212)
T ss_dssp CEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHC----------------------------
T ss_pred CEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCC------ccccceeecCCcccccccc
Confidence 9999999999999999999999999999999999999998864 5567788999888888764
No 11
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=100.00 E-value=1.7e-44 Score=330.88 Aligned_cols=185 Identities=23% Similarity=0.369 Sum_probs=168.8
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCC----
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAG---- 124 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~---- 124 (378)
++||++|.|+ ++.+|++|+++...+..+.+|++|||+++. ++++++|+++|||+. ++++.+.+
T Consensus 2 m~riavl~Sg--~Gsnl~ali~~~~~~~l~~eI~~Visn~~~----------a~v~~~A~~~gIp~~-~~~~~~~~~r~~ 68 (211)
T 3p9x_A 2 MKRVAIFASG--SGTNAEAIIQSQKAGQLPCEVALLITDKPG----------AKVVERVKVHEIPVC-ALDPKTYPSKEA 68 (211)
T ss_dssp -CEEEEECCT--TCHHHHHHHHHHHTTCCSSEEEEEEESCSS----------SHHHHHHHTTTCCEE-ECCGGGSSSHHH
T ss_pred CCEEEEEEeC--CchHHHHHHHHHHcCCCCcEEEEEEECCCC----------cHHHHHHHHcCCCEE-EeChhhcCchhh
Confidence 4799999999 589999999987666667899999998654 378999999999954 23444433
Q ss_pred -cHHHHHHHHhcCCcEEEEecCCCcCChhhhcCCCCceEEEccCCCCCCCCchHHHHHHHcCCcEEEEEEEEecCCCCCC
Q 048078 125 -EDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQGGAKETGVSLAFTVRALDAG 203 (378)
Q Consensus 125 -~~~~~~~l~~~~~Dliv~~~~~~ilp~~il~~~~~g~iNiHpSlLP~yRG~~pi~wai~~g~~~tGvTih~~~~~~D~G 203 (378)
++++++.|++.++|++|+++|++|||+++|+.+++|+||+||||||+|||++|++|||++|++++|+|+|+|++++|+|
T Consensus 69 ~d~~~~~~l~~~~~Dliv~agy~~Il~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~~~D~G 148 (211)
T 3p9x_A 69 YEIEVVQQLKEKQIDFVVLAGYMRLVGPTLLGAYEGRIVNIHPSLLPAFPGLHAIEQAIRANVKVTGVTIHYVDEGMDTG 148 (211)
T ss_dssp HHHHHHHHHHHTTCCEEEESSCCSCCCHHHHHHHTTSEEEEESSCTTSSCSSCHHHHHHHTTCSEEEEEEEECCSSSSCS
T ss_pred hHHHHHHHHHhcCCCEEEEeCchhhcCHHHHhhccCCeEEECCccCCCCCCccHHHHHHHcCCCeEEEEEEEEcCCCCCC
Confidence 4678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeEEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHHHHhHcCCC
Q 048078 204 PVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSA 246 (378)
Q Consensus 204 ~Ii~Q~~~~I~~~dt~~~L~~kl~~~~~~ll~~~l~~l~~g~~ 246 (378)
|||.|+.++|.++||.++|++|+.+++.+++.++|+.+.+|..
T Consensus 149 ~Ii~Q~~v~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~~ 191 (211)
T 3p9x_A 149 PIIAQEAVSIEEEDTLETLTTKIQAVEHRLYPATLHKLLSKAE 191 (211)
T ss_dssp CEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTCTTT
T ss_pred CEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 9999999999999999999999999999999999999999875
No 12
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=100.00 E-value=3.4e-44 Score=330.09 Aligned_cols=186 Identities=24% Similarity=0.326 Sum_probs=169.7
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
+++||++|.|+ ++.+|++|+++...+..+++|++|||+++... ..++|+++|||+. ++.+.+.++++
T Consensus 7 ~~~ri~vl~SG--~gsnl~all~~~~~~~~~~~I~~Vis~~~~a~----------~l~~A~~~gIp~~-~~~~~~~~~~~ 73 (215)
T 3kcq_A 7 KELRVGVLISG--RGSNLEALAKAFSTEESSVVISCVISNNAEAR----------GLLIAQSYGIPTF-VVKRKPLDIEH 73 (215)
T ss_dssp CCEEEEEEESS--CCHHHHHHHHHTCCC-CSEEEEEEEESCTTCT----------HHHHHHHTTCCEE-ECCBTTBCHHH
T ss_pred CCCEEEEEEEC--CcHHHHHHHHHHHcCCCCcEEEEEEeCCcchH----------HHHHHHHcCCCEE-EeCcccCChHH
Confidence 37899999999 59999999998776655789999999876542 4689999999944 23445566789
Q ss_pred HHHHHHhcCCcEEEEecCCCcCChhhhcCCCCceEEEccCCCCCCCCchHHHHHHHcCCcEEEEEEEEecCCCCCCCeeE
Q 048078 128 FLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIA 207 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~~~~ilp~~il~~~~~g~iNiHpSlLP~yRG~~pi~wai~~g~~~tGvTih~~~~~~D~G~Ii~ 207 (378)
+++.|++.++|++|+++|++|||+++++.+++++||+||||||+|||++|++|||++|++++|+|+|+|++++|+||||.
T Consensus 74 ~~~~L~~~~~Dlivlagy~~IL~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~~lD~G~Ii~ 153 (215)
T 3kcq_A 74 ISTVLREHDVDLVCLAGFMSILPEKFVTDWHHKIINIHPSLLPSFKGLNAQEQAYKAGVKIAGCTLHYVYQELDAGPIIM 153 (215)
T ss_dssp HHHHHHHTTCSEEEESSCCSCCCHHHHHHTTTSEEEEESSCTTTTCSSCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEE
T ss_pred HHHHHHHhCCCEEEEeCCceEeCHHHHhhccCCeEEECcccccCCCCccHHHHHHHcCCCeEEEEEEEEcCCCCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHHHHHHHHHhHcCCC
Q 048078 208 REKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSA 246 (378)
Q Consensus 208 Q~~~~I~~~dt~~~L~~kl~~~~~~ll~~~l~~l~~g~~ 246 (378)
|+.++|.++||.++|++|+.+++.+++.++|+.+.+|+.
T Consensus 154 Q~~v~I~~~dt~~~L~~rl~~~e~~ll~~~l~~~~~g~~ 192 (215)
T 3kcq_A 154 QAAVPVLREDTAESLASRILAAEHVCYPKGVKLIAQDKI 192 (215)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred EEEeecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCe
Confidence 999999999999999999999999999999999999875
No 13
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=100.00 E-value=6.9e-45 Score=348.44 Aligned_cols=228 Identities=21% Similarity=0.261 Sum_probs=196.8
Q ss_pred CCccccCCcceee--ccccccccccceeeEeeecCCCCCCCCCCCCC------------------CCCCceEEEEecCcc
Q 048078 1 SNFFSLHSGLVED--EKTKEMNSSLMIRRFFCFKGPATSSTTPSAFS------------------VSRKKPLVFLGSPQV 60 (378)
Q Consensus 1 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~rIvf~Gs~~~ 60 (378)
++||.-|++||+| |+++.+.-.||||-.|..++ ..+-...+ ..+++||++|+|+.
T Consensus 26 s~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~----~~~~~~L~~~f~~la~~l~m~~~l~~~~~~~ri~vl~Sg~- 100 (286)
T 3n0v_A 26 TRYLFEQRCYVTEHHSFDDRQSGRFFIRVEFRQPD----DFDEAGFRAGLAERSEAFGMAFELTAPNHRPKVVIMVSKA- 100 (286)
T ss_dssp HHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECCS----SCCHHHHHHHHHHHHGGGTCEEEEECTTCCCEEEEEESSC-
T ss_pred HHHHHHCCCCeeeeeeeccCCCCeeEEEEEEecCC----CCCHHHHHHHHHHHHHHcCCEEEeecCCCCcEEEEEEeCC-
Confidence 4789999999999 88889999999999887642 11111110 35688999999995
Q ss_pred hHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCC---CCcHHHHHHHHhcCC
Q 048078 61 SVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPER---AGEDAFLSNLRALQP 137 (378)
Q Consensus 61 a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~---~~~~~~~~~l~~~~~ 137 (378)
+.||++|+++...+..+++|++||++++. +.++|+++|||+.++..... ..++++++.|++.++
T Consensus 101 -g~~l~~ll~~~~~g~l~~~i~~Visn~~~------------~~~~A~~~gIp~~~~~~~~~~r~~~~~~~~~~l~~~~~ 167 (286)
T 3n0v_A 101 -DHCLNDLLYRQRIGQLGMDVVAVVSNHPD------------LEPLAHWHKIPYYHFALDPKDKPGQERKVLQVIEETGA 167 (286)
T ss_dssp -CHHHHHHHHHHHTTSSCCEEEEEEESSST------------THHHHHHTTCCEEECCCBTTBHHHHHHHHHHHHHHHTC
T ss_pred -CCCHHHHHHHHHCCCCCcEEEEEEeCcHH------------HHHHHHHcCCCEEEeCCCcCCHHHHHHHHHHHHHhcCC
Confidence 79999999976666667999999998865 35789999999543211111 124578899999999
Q ss_pred cEEEEecCCCcCChhhhcCCCCceEEEccCCCCCCCCchHHHHHHHcCCcEEEEEEEEecCCCCCCCeeEEEEEEeCCCC
Q 048078 138 ELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQI 217 (378)
Q Consensus 138 Dliv~~~~~~ilp~~il~~~~~g~iNiHpSlLP~yRG~~pi~wai~~g~~~tGvTih~~~~~~D~G~Ii~Q~~~~I~~~d 217 (378)
|++|+++|++|||+++++.+++++||+||||||+|||++|++||+.+|++++|+|+|+|++++|+||||.|+.++|.++|
T Consensus 168 Dlivla~y~~il~~~~l~~~~~~~iNiHpSlLP~~rG~~p~~~Ai~~G~~~~G~Tvh~v~~~lD~GpIi~Q~~~~i~~~d 247 (286)
T 3n0v_A 168 ELVILARYMQVLSPELCRRLDGWAINIHHSLLPGFKGAKPYHQAYNKGVKMVGATAHYINNDLDEGPIIAQGVEVVDHSH 247 (286)
T ss_dssp SEEEESSCCSCCCHHHHHHTTTSEEEEEECSSTTCCCSCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEEEEEEECCTTC
T ss_pred CEEEecccccccCHHHHhhhcCCeEEeccccccCCCCccHHHHHHHcCCCeEEEEEEEEcCCCCCCceeEEEEEEcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHhHcCCC
Q 048078 218 KAPELLVLLFSEGSELLIRELPSILDGSA 246 (378)
Q Consensus 218 t~~~L~~kl~~~~~~ll~~~l~~l~~g~~ 246 (378)
|.++|.+|+.+++.+++.++++.+.+|+.
T Consensus 248 t~~~L~~r~~~~e~~~l~~av~~~~~~~~ 276 (286)
T 3n0v_A 248 YPEDLIAKGRDIECLTLARAVGYHIERRV 276 (286)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCE
Confidence 99999999999999999999999998875
No 14
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=100.00 E-value=5.8e-44 Score=331.96 Aligned_cols=191 Identities=22% Similarity=0.299 Sum_probs=167.7
Q ss_pred CCCCCCCCCceEEEE--ecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceec
Q 048078 41 PSAFSVSRKKPLVFL--GSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIF 118 (378)
Q Consensus 41 ~~~~~~~~~~rIvf~--Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~ 118 (378)
++-.....+|||+|| |+++++..+|++|.+.. .+++|++|||+++++ +++++|+++|||+. ++
T Consensus 14 ~~~~~~~~~~rI~~l~SG~g~~~~~~l~~l~~~~----~~~~I~~Vvt~~~~~----------~~~~~A~~~gIp~~-~~ 78 (229)
T 3auf_A 14 ENLYFQGHMIRIGVLISGSGTNLQAILDGCREGR----IPGRVAVVISDRADA----------YGLERARRAGVDAL-HM 78 (229)
T ss_dssp BSSSCBTTCEEEEEEESSCCHHHHHHHHHHHTTS----SSEEEEEEEESSTTC----------HHHHHHHHTTCEEE-EC
T ss_pred ccccccCCCcEEEEEEeCCcHHHHHHHHHHHhCC----CCCeEEEEEcCCCch----------HHHHHHHHcCCCEE-EE
Confidence 333334556899999 77777777888776531 258999999987653 57899999999943 23
Q ss_pred CCCCCC-----cHHHHHHHHhcCCcEEEEecCCCcCChhhhcCCCCceEEEccCCCCCCCCchHHHHHHHcCCcEEEEEE
Q 048078 119 TPERAG-----EDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQGGAKETGVSL 193 (378)
Q Consensus 119 ~~~~~~-----~~~~~~~l~~~~~Dliv~~~~~~ilp~~il~~~~~g~iNiHpSlLP~yRG~~pi~wai~~g~~~tGvTi 193 (378)
++.+.+ ++++++.|++.++|++|+++|++|||+++|+.+++++||+||||||+|||++|++|||++|++++|+|+
T Consensus 79 ~~~~~~~r~~~~~~~~~~l~~~~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~Ai~~G~~~tGvTv 158 (229)
T 3auf_A 79 DPAAYPSRTAFDAALAERLQAYGVDLVCLAGYMRLVRGPMLTAFPNRILNIHPSLLPAFPGLEAQRQALEHGVKVAGCTV 158 (229)
T ss_dssp CGGGSSSHHHHHHHHHHHHHHTTCSEEEESSCCSCCCHHHHHHSTTCEEEEESSCTTSSCSSCHHHHHHHHTCSEEEEEE
T ss_pred CcccccchhhccHHHHHHHHhcCCCEEEEcChhHhCCHHHHhhccCCEEEEccCcCcCCCCcCHHHHHHHcCCCeEEEEE
Confidence 454443 477889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCCCeeEEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHHHHhHcCCC
Q 048078 194 AFTVRALDAGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSA 246 (378)
Q Consensus 194 h~~~~~~D~G~Ii~Q~~~~I~~~dt~~~L~~kl~~~~~~ll~~~l~~l~~g~~ 246 (378)
|+|++++|+||||.|+.++|.++||.++|++|+.+++.+++.++|+.+.+|++
T Consensus 159 h~v~~~~D~G~Ii~Q~~v~I~~~dt~~~L~~rl~~~~~~ll~~~l~~l~~g~~ 211 (229)
T 3auf_A 159 HFVTAGVDEGPIILQAAVPVLEGDTVEDLRRRILAEEHRIYPEAIRLFAEGRL 211 (229)
T ss_dssp EECCSSTTCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred EEECCCCcCCCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 99999999999999999999999999999999999999999999999998875
No 15
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=100.00 E-value=9.1e-45 Score=349.44 Aligned_cols=228 Identities=20% Similarity=0.312 Sum_probs=196.8
Q ss_pred CCccccCCcceee--ccccccccccceeeEeeecCCCCCCCCCCCCC------------------CCCCceEEEEecCcc
Q 048078 1 SNFFSLHSGLVED--EKTKEMNSSLMIRRFFCFKGPATSSTTPSAFS------------------VSRKKPLVFLGSPQV 60 (378)
Q Consensus 1 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~rIvf~Gs~~~ 60 (378)
|+|+..|++||+| |+.++..-.||||--|..++ ...+-.... ...++||++|+|+.
T Consensus 40 S~~La~~g~NI~d~~q~~d~~~g~FfMr~~~~~~~---~~~~~~~L~~~l~~la~~l~m~~~l~~~~~~~ri~vl~Sg~- 115 (302)
T 3o1l_A 40 SNFLASHNGWITEASHHSDNLSGWFFMRHEIRADT---LPFDLDGFREAFTPIAEEFSMDWRITDSAQKKRVVLMASRE- 115 (302)
T ss_dssp HHHHHHTTCCEEEEEEEEETTTTEEEEEEEEEGGG---SSSCHHHHHHHHHHHHHHHTCEEEEEETTSCCEEEEEECSC-
T ss_pred HHHHHHCCCCEEEeeEEecCCCCeEEEEEEEecCC---CCCCHHHHHHHHHHHHHHhCCeeeecccCCCcEEEEEEeCC-
Confidence 4689999999999 88888889999999888642 111111111 35688999999995
Q ss_pred hHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCC----CcHHHHHHHHhcC
Q 048078 61 SVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERA----GEDAFLSNLRALQ 136 (378)
Q Consensus 61 a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~----~~~~~~~~l~~~~ 136 (378)
+.||++|+++...+..+++|++|||+.+. +.++|+++|||+.++ ..... .++++++.|++.+
T Consensus 116 -g~nl~~ll~~~~~g~l~~~I~~Visn~~~------------~~~~A~~~gIp~~~~-~~~~~~r~~~~~~~~~~l~~~~ 181 (302)
T 3o1l_A 116 -SHCLADLLHRWHSDELDCDIACVISNHQD------------LRSMVEWHDIPYYHV-PVDPKDKEPAFAEVSRLVGHHQ 181 (302)
T ss_dssp -CHHHHHHHHHHHTTCSCSEEEEEEESSST------------THHHHHTTTCCEEEC-CCCSSCCHHHHHHHHHHHHHTT
T ss_pred -chhHHHHHHHHHCCCCCcEEEEEEECcHH------------HHHHHHHcCCCEEEc-CCCcCCHHHHHHHHHHHHHHhC
Confidence 78999999987666667999999998764 467899999995422 11222 2467889999999
Q ss_pred CcEEEEecCCCcCChhhhcCCCCceEEEccCCCCCCCCchHHHHHHHcCCcEEEEEEEEecCCCCCCCeeEEEEEEeCCC
Q 048078 137 PELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQ 216 (378)
Q Consensus 137 ~Dliv~~~~~~ilp~~il~~~~~g~iNiHpSlLP~yRG~~pi~wai~~g~~~tGvTih~~~~~~D~G~Ii~Q~~~~I~~~ 216 (378)
+|++|+++||+|||+++++.++.++||+||||||+|||++|++||+.+|++.+|+|+|+|++++|+||||.|+.++|.++
T Consensus 182 ~DliVlagym~IL~~~~l~~~~~~~INiHpSlLP~frG~~p~~~Ai~~G~k~tG~TvH~v~~~lD~GpII~Q~~v~I~~~ 261 (302)
T 3o1l_A 182 ADVVVLARYMQILPPQLCREYAHQVINIHHSFLPSFVGAKPYHQASLRGVKLIGATCHYVTEELDAGPIIEQDVVRVSHR 261 (302)
T ss_dssp CSEEEESSCCSCCCTTHHHHTTTCEEEEESSCTTSSCSSCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEEEEEEECCTT
T ss_pred CCEEEHhHhhhhcCHHHHhhhhCCeEEeCcccccCCCCccHHHHHHHcCCCeEEEEEEEECCCCcCCCeEEEEEEecCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhHcCCC
Q 048078 217 IKAPELLVLLFSEGSELLIRELPSILDGSA 246 (378)
Q Consensus 217 dt~~~L~~kl~~~~~~ll~~~l~~l~~g~~ 246 (378)
||.++|.+|+.+++.+++.++++.+.+|+.
T Consensus 262 dt~~~L~~r~~~~e~~~l~~av~~~~~~~v 291 (302)
T 3o1l_A 262 DSIENMVRFGRDVEKMVLARGLRAHLEDRV 291 (302)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhCCE
Confidence 999999999999999999999999998875
No 16
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=100.00 E-value=3.8e-44 Score=329.01 Aligned_cols=184 Identities=22% Similarity=0.321 Sum_probs=163.9
Q ss_pred ceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCC-----
Q 048078 50 KPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAG----- 124 (378)
Q Consensus 50 ~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~----- 124 (378)
+||++|.|+ ++++|++|+++...+..+++|++|||+++++. ..++|+++|||+. ++++.+..
T Consensus 1 ~riaVl~SG--~Gs~L~aLi~~~~~~~~~~~I~~Vvs~~~~~~----------~~~~A~~~gIp~~-~~~~~~~~~r~~~ 67 (209)
T 1meo_A 1 ARVAVLISG--TGSNLQALIDSTREPNSSAQIDIVISNKAAVA----------GLDKAERAGIPTR-VINHKLYKNRVEF 67 (209)
T ss_dssp CEEEEEESS--SCTTHHHHHHHHHSTTCSCEEEEEEESSTTCH----------HHHHHHHTTCCEE-ECCGGGSSSHHHH
T ss_pred CeEEEEEEC--CchHHHHHHHHHhcCCCCcEEEEEEeCCCChH----------HHHHHHHcCCCEE-EECccccCchhhh
Confidence 589999999 58899999987555555799999999998753 4689999999943 23554443
Q ss_pred cHHHHHHHHhcCCcEEEEecCCCcCChhhhcCCCCceEEEccCCCCCCCCchHHHHHHHcCCcEEEEEEEEecCCCCCCC
Q 048078 125 EDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQGGAKETGVSLAFTVRALDAGP 204 (378)
Q Consensus 125 ~~~~~~~l~~~~~Dliv~~~~~~ilp~~il~~~~~g~iNiHpSlLP~yRG~~pi~wai~~g~~~tGvTih~~~~~~D~G~ 204 (378)
++++.+.|+++++|++|+++|++|||+++|+.+++++||+||||||+|||++|++|||++|++++|+|+|+|++++|+||
T Consensus 68 ~~~~~~~l~~~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~~~D~G~ 147 (209)
T 1meo_A 68 DSAIDLVLEEFSIDIVCLAGFMRILSGPFVQKWNGKMLNIHPSLLPSFKGSNAHEQALETGVTVTGCTVHFVAEDVDAGQ 147 (209)
T ss_dssp HHHHHHHHHHTTCCEEEEESCCSCCCHHHHHHTTTSEEEEESSSTTSSCSSCHHHHHHHHTCSEEEEEEEECCC---CCC
T ss_pred hHHHHHHHHhcCCCEEEEcchhhhCCHHHHhhhcCCEEEEccCcCcCCCCccHHHHHHHcCCCcEEEEEEEECCCCcCCC
Confidence 36788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHHHHhHcCCC
Q 048078 205 VIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSA 246 (378)
Q Consensus 205 Ii~Q~~~~I~~~dt~~~L~~kl~~~~~~ll~~~l~~l~~g~~ 246 (378)
||.|+.++|.++||..+|++|+.+++.+++.++|+.+.+|+.
T Consensus 148 Ii~Q~~v~I~~~dt~~~L~~rl~~~~~~ll~~~l~~~~~g~~ 189 (209)
T 1meo_A 148 IILQEAVPVKRGDTVATLSERVKLAEHKIFPAALQLVASGTV 189 (209)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHTSE
T ss_pred EEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 999999999999999999999999999999999999999875
No 17
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=100.00 E-value=6e-44 Score=328.43 Aligned_cols=183 Identities=27% Similarity=0.359 Sum_probs=166.3
Q ss_pred CCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCC----
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPER---- 122 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~---- 122 (378)
..++||+||.|+ ++.+|++|+++... ..+++|++|+|+++. ++.++|+++||| ++.++.
T Consensus 10 ~~~~ri~vl~SG--~gsnl~all~~~~~-~~~~eI~~Vis~~~a-----------~~~~~A~~~gIp---~~~~~~~~~~ 72 (215)
T 3da8_A 10 SAPARLVVLASG--TGSLLRSLLDAAVG-DYPARVVAVGVDREC-----------RAAEIAAEASVP---VFTVRLADHP 72 (215)
T ss_dssp CSSEEEEEEESS--CCHHHHHHHHHSST-TCSEEEEEEEESSCC-----------HHHHHHHHTTCC---EEECCGGGSS
T ss_pred CCCcEEEEEEeC--ChHHHHHHHHHHhc-cCCCeEEEEEeCCch-----------HHHHHHHHcCCC---EEEeCccccc
Confidence 457899999998 48999999988643 346799999999873 578999999999 444421
Q ss_pred ---CCcHHHHHHHHhcCCcEEEEecCCCcCChhhhcCCCCceEEEccCCCCCCCCchHHHHHHHcCCcEEEEEEEEecCC
Q 048078 123 ---AGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQGGAKETGVSLAFTVRA 199 (378)
Q Consensus 123 ---~~~~~~~~~l~~~~~Dliv~~~~~~ilp~~il~~~~~g~iNiHpSlLP~yRG~~pi~wai~~g~~~tGvTih~~~~~ 199 (378)
..++++++.|+++++|++|+++|++|||+++|+.+++|+||+||||||+|||++|++|||++|++++|+|+|+|+++
T Consensus 73 ~r~~~d~~~~~~l~~~~~Dlivlagy~~iL~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~~ 152 (215)
T 3da8_A 73 SRDAWDVAITAATAAHEPDLVVSAGFMRILGPQFLSRFYGRTLNTHPALLPAFPGTHGVADALAYGVKVTGATVHLVDAG 152 (215)
T ss_dssp SHHHHHHHHHHHHHTTCCSEEEEEECCSCCCHHHHHHHTTTEEEEESSCTTSSCSTTHHHHHHHHTCSEEEEEEEECCSS
T ss_pred chhhhhHHHHHHHHhhCCCEEEEcCchhhCCHHHHhhccCCeEEeCcccccCCCCchHHHHHHHcCCCeEEEEEEEEcCC
Confidence 11567889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeeEEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHHHHhHcCCC
Q 048078 200 LDAGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSA 246 (378)
Q Consensus 200 ~D~G~Ii~Q~~~~I~~~dt~~~L~~kl~~~~~~ll~~~l~~l~~g~~ 246 (378)
+|+||||.|+.++|.++||.++|++|+.+++.+++.++|+.+.+|+.
T Consensus 153 lD~G~Ii~Q~~v~I~~~dt~~~L~~rl~~~~~~ll~~~l~~~~~g~~ 199 (215)
T 3da8_A 153 TDTGPILAQQPVPVLDGDDEETLHERIKVTERRLLVAAVAALATHGV 199 (215)
T ss_dssp SSCSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHCE
T ss_pred CCCCCEEEEEEeecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 99999999999999999999999999999999999999999998875
No 18
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=100.00 E-value=6.3e-44 Score=328.37 Aligned_cols=184 Identities=23% Similarity=0.324 Sum_probs=166.3
Q ss_pred ceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCC-----
Q 048078 50 KPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAG----- 124 (378)
Q Consensus 50 ~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~----- 124 (378)
+||++|+|+. +++|++|+++...+..+++|++|||+++++ .++++|+++|||+. .+.+.+.+
T Consensus 1 ~ri~vl~Sg~--gsnl~ali~~~~~~~~~~~i~~Vis~~~~~----------~~~~~A~~~gIp~~-~~~~~~~~~r~~~ 67 (212)
T 1jkx_A 1 MNIVVLISGN--GSNLQAIIDACKTNKIKGTVRAVFSNKADA----------FGLERARQAGIATH-TLIASAFDSREAY 67 (212)
T ss_dssp CEEEEEESSC--CHHHHHHHHHHHTTSSSSEEEEEEESCTTC----------HHHHHHHHTTCEEE-ECCGGGCSSHHHH
T ss_pred CEEEEEEECC--cHHHHHHHHHHHcCCCCceEEEEEeCCCch----------HHHHHHHHcCCcEE-EeCcccccchhhc
Confidence 5999999995 679999998765555578999999998764 46899999999943 12233333
Q ss_pred cHHHHHHHHhcCCcEEEEecCCCcCChhhhcCCCCceEEEccCCCCCCCCchHHHHHHHcCCcEEEEEEEEecCCCCCCC
Q 048078 125 EDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQGGAKETGVSLAFTVRALDAGP 204 (378)
Q Consensus 125 ~~~~~~~l~~~~~Dliv~~~~~~ilp~~il~~~~~g~iNiHpSlLP~yRG~~pi~wai~~g~~~tGvTih~~~~~~D~G~ 204 (378)
++++++.|+++++|++|+++|++|||+++|+.+++++||+||||||+|||++|++|||++|++++|+|+|+|++++|+||
T Consensus 68 ~~~~~~~l~~~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpSlLP~yrG~~pi~~ai~~G~~~tGvTvh~v~~~~D~G~ 147 (212)
T 1jkx_A 68 DRELIHEIDMYAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPSLLPKYPGLHTHRQALENGDEEHGTSVHFVTDELDGGP 147 (212)
T ss_dssp HHHHHHHHGGGCCSEEEESSCCSCCCHHHHHHTTTSEEEEESSCTTSCCSSCHHHHHHHTTCSEEEEEEEECCSSTTCSC
T ss_pred cHHHHHHHHhcCCCEEEEeChhhhCCHHHHhhccCCEEEEccCcccCCCCccHHHHHHHcCCCceEEEEEEEcccccCCC
Confidence 47888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHHHHhHcCCC
Q 048078 205 VIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSA 246 (378)
Q Consensus 205 Ii~Q~~~~I~~~dt~~~L~~kl~~~~~~ll~~~l~~l~~g~~ 246 (378)
||.|+.++|.++||.++|++|+.+++.+++.++|+.+.+|+.
T Consensus 148 Ii~Q~~v~I~~~dt~~~L~~rl~~~~~~ll~~~l~~~~~g~~ 189 (212)
T 1jkx_A 148 VILQAKVPVFAGDSEDDITARVQTQEHAIYPLVISWFADGRL 189 (212)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred EEEEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 999999999999999999999999999999999999998875
No 19
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=100.00 E-value=1.1e-43 Score=325.37 Aligned_cols=187 Identities=27% Similarity=0.406 Sum_probs=164.2
Q ss_pred CCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCC--
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAG-- 124 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~-- 124 (378)
..++||++|.|+ ++.+|++|+++...+..+++|++|||+++... ..++|+++|||+.+ +.+.+..
T Consensus 5 m~~~ri~vl~SG--~gsnl~all~~~~~~~l~~~I~~Visn~~~a~----------~l~~A~~~gIp~~~-~~~~~~~~r 71 (209)
T 4ds3_A 5 MKRNRVVIFISG--GGSNMEALIRAAQAPGFPAEIVAVFSDKAEAG----------GLAKAEAAGIATQV-FKRKDFASK 71 (209)
T ss_dssp -CCEEEEEEESS--CCHHHHHHHHHHTSTTCSEEEEEEEESCTTCT----------HHHHHHHTTCCEEE-CCGGGSSSH
T ss_pred CCCccEEEEEEC--CcHHHHHHHHHHHcCCCCcEEEEEEECCcccH----------HHHHHHHcCCCEEE-eCccccCCH
Confidence 347899999999 59999999998776656789999999876543 36899999999432 2222222
Q ss_pred ---cHHHHHHHHhcCCcEEEEecCCCcCChhhhcCCCCceEEEccCCCCCCCCchHHHHHHHcCCcEEEEEEEEecCCCC
Q 048078 125 ---EDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQGGAKETGVSLAFTVRALD 201 (378)
Q Consensus 125 ---~~~~~~~l~~~~~Dliv~~~~~~ilp~~il~~~~~g~iNiHpSlLP~yRG~~pi~wai~~g~~~tGvTih~~~~~~D 201 (378)
++++++.|+++++|++|+++|++|||+++|+.+++++||+||||||+|||++|++|||++|++++|+|+|+|++++|
T Consensus 72 ~~~d~~~~~~l~~~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~~~D 151 (209)
T 4ds3_A 72 EAHEDAILAALDVLKPDIICLAGYMRLLSGRFIAPYEGRILNIHPSLLPLFPGLHTHQRALDAGMKLAGCTVHLVTEGMD 151 (209)
T ss_dssp HHHHHHHHHHHHHHCCSEEEESSCCSCCCHHHHGGGTTCEEEEESSCTTSSCSSCHHHHHHHTTCSEEEEEEEECCC--C
T ss_pred HHHHHHHHHHHHhcCCCEEEEeccccCcCHHHHhhccCCeEEECCccccCCCChhHHHHHHHcCCCeEEEEEEEEcCCCC
Confidence 46888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeeEEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHHHHhHcCCC
Q 048078 202 AGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSA 246 (378)
Q Consensus 202 ~G~Ii~Q~~~~I~~~dt~~~L~~kl~~~~~~ll~~~l~~l~~g~~ 246 (378)
+||||.|+.++|.++||.++|++|+.+++.+++.++|+.+.+|+.
T Consensus 152 ~G~Ii~Q~~v~I~~~dt~~~L~~r~~~~~~~ll~~~l~~~~~g~~ 196 (209)
T 4ds3_A 152 EGPILAQAAVPVLDGDTAETLAARVLKAEHRLYPLALQKFAAGEK 196 (209)
T ss_dssp CCCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHCC--
T ss_pred CCCeEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999999874
No 20
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=100.00 E-value=2.1e-44 Score=345.88 Aligned_cols=230 Identities=22% Similarity=0.326 Sum_probs=196.4
Q ss_pred CCccccCCcceee--ccccccccccceeeEeeecCCCCCCCCCCCCC------------------CCCCceEEEEecCcc
Q 048078 1 SNFFSLHSGLVED--EKTKEMNSSLMIRRFFCFKGPATSSTTPSAFS------------------VSRKKPLVFLGSPQV 60 (378)
Q Consensus 1 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~rIvf~Gs~~~ 60 (378)
|+|++.|++||+| |+++.+.-.||||..|..+-|+.. .+-.... ..+++||++|+|+.
T Consensus 28 s~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~~~-~~~~~L~~~f~~la~~~~m~~~l~~~~~~~ri~vl~Sg~- 105 (292)
T 3lou_A 28 VGLLDRHRCYVDELTVFDDDLSARFFVRCVFHATDDADA-LRVDALRREFEPIAERFRMQWAIHDVAARPKVLIMVSKL- 105 (292)
T ss_dssp HHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEECC-----CCHHHHHHHHHHHHHHHTCEEEEEETTSCCEEEEEECSC-
T ss_pred HHHHHHCCCCEEeeEEEecCCCCceEEEEEEEccCcccC-CCHHHHHHHHHHHHHhcCcEEEeeccCCCCEEEEEEcCC-
Confidence 4789999999999 888899999999999977522211 1011111 35688999999995
Q ss_pred hHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCC----CcHHHHHHHHhcC
Q 048078 61 SVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERA----GEDAFLSNLRALQ 136 (378)
Q Consensus 61 a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~----~~~~~~~~l~~~~ 136 (378)
+.||++|+++...+..+.+|++||++++. +.++|+++|||+.++ ..... .++++++.|++.+
T Consensus 106 -g~~l~~ll~~~~~g~l~~~i~~Visn~~~------------~~~~A~~~gIp~~~~-~~~~~~r~~~~~~~~~~l~~~~ 171 (292)
T 3lou_A 106 -EHCLADLLFRWKMGELKMDIVGIVSNHPD------------FAPLAAQHGLPFRHF-PITADTKAQQEAQWLDVFETSG 171 (292)
T ss_dssp -CHHHHHHHHHHHHTSSCCEEEEEEESSST------------THHHHHHTTCCEEEC-CCCSSCHHHHHHHHHHHHHHHT
T ss_pred -CcCHHHHHHHHHcCCCCcEEEEEEeCcHH------------HHHHHHHcCCCEEEe-CCCcCCHHHHHHHHHHHHHHhC
Confidence 78999999876656667999999998865 357899999995422 11111 2457889999999
Q ss_pred CcEEEEecCCCcCChhhhcCCCCceEEEccCCCCCCCCchHHHHHHHcCCcEEEEEEEEecCCCCCCCeeEEEEEEeCCC
Q 048078 137 PELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQ 216 (378)
Q Consensus 137 ~Dliv~~~~~~ilp~~il~~~~~g~iNiHpSlLP~yRG~~pi~wai~~g~~~tGvTih~~~~~~D~G~Ii~Q~~~~I~~~ 216 (378)
+|++|+++|++|||+++++.+++++||+||||||+|||++|++||+.+|++++|+|+|+|++++|+||||.|+.++|.++
T Consensus 172 ~Dlivla~y~~il~~~~l~~~~~~~iNiHpSlLP~~rG~~p~~~Ai~~G~~~~G~Tvh~v~~~lD~G~Ii~Q~~v~i~~~ 251 (292)
T 3lou_A 172 AELVILARYMQVLSPEASARLANRAINIHHSFLPGFKGAKPYHQAHARGVKLIGATAHFVTDDLDEGPIIEQVVERVDHS 251 (292)
T ss_dssp CSEEEESSCCSCCCHHHHHHTTTSEEEEEEECSSCCCSSCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEEEEEEECCTT
T ss_pred CCEEEecCchhhCCHHHHhhhcCCeEEeCCCcCcCCCCccHHHHHHHcCCCeEEEEEEEEcCCCcCCCEEEEEEEEcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhHcCCC
Q 048078 217 IKAPELLVLLFSEGSELLIRELPSILDGSA 246 (378)
Q Consensus 217 dt~~~L~~kl~~~~~~ll~~~l~~l~~g~~ 246 (378)
||.++|.+|+.+++.+++.++++.+.+|+.
T Consensus 252 dt~~~L~~r~~~~e~~~l~~av~~~~~~~~ 281 (292)
T 3lou_A 252 YRPEQLLAVGRDVECITLARAVKAFIERRV 281 (292)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhCCE
Confidence 999999999999999999999999998875
No 21
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=100.00 E-value=1.3e-43 Score=326.27 Aligned_cols=186 Identities=25% Similarity=0.349 Sum_probs=166.3
Q ss_pred CCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCC---
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERA--- 123 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~--- 123 (378)
.+++||++|.|+ ++++|++|+++...+ .+++|++|||++++. ...++|+++|||+.+ +.+.+.
T Consensus 3 ~~~~riavl~SG--~Gsnl~all~~~~~~-~~~eI~~Vis~~~~a----------~~~~~A~~~gIp~~~-~~~~~~~~r 68 (215)
T 3tqr_A 3 REPLPIVVLISG--NGTNLQAIIGAIQKG-LAIEIRAVISNRADA----------YGLKRAQQADIPTHI-IPHEEFPSR 68 (215)
T ss_dssp -CCEEEEEEESS--CCHHHHHHHHHHHTT-CSEEEEEEEESCTTC----------HHHHHHHHTTCCEEE-CCGGGSSSH
T ss_pred CCCcEEEEEEeC--CcHHHHHHHHHHHcC-CCCEEEEEEeCCcch----------HHHHHHHHcCCCEEE-eCccccCch
Confidence 357899999998 599999999886655 579999999987754 347899999999542 222221
Q ss_pred --CcHHHHHHHHhcCCcEEEEecCCCcCChhhhcCCCCceEEEccCCCCCCCCchHHHHHHHcCCcEEEEEEEEecCCCC
Q 048078 124 --GEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQGGAKETGVSLAFTVRALD 201 (378)
Q Consensus 124 --~~~~~~~~l~~~~~Dliv~~~~~~ilp~~il~~~~~g~iNiHpSlLP~yRG~~pi~wai~~g~~~tGvTih~~~~~~D 201 (378)
.++++++.|+++++|++|+++|++|||+++|+.+++++||+||||||+|||++|++|||++|++++|+|+|+|++++|
T Consensus 69 ~~~d~~~~~~l~~~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~Ai~~G~~~tGvTvh~v~~~~D 148 (215)
T 3tqr_A 69 TDFESTLQKTIDHYDPKLIVLAGFMRKLGKAFVSHYSGRMINIHPSLLPKYTGLNTHERALAAGETEHGVSVHYVTEDLD 148 (215)
T ss_dssp HHHHHHHHHHHHTTCCSEEEESSCCSCCCHHHHHHTTTSEEEEESSSTTTTCSSCHHHHHHHTTCSEEEEEEEECC-CTT
T ss_pred hHhHHHHHHHHHhcCCCEEEEccchhhCCHHHHhhccCCeEEeCcccCCCCCChhHHHHHHHcCCCeEEEEEEEEcCCCC
Confidence 256788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeeEEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHHHHhHcCCC
Q 048078 202 AGPVIAREKMEVDDQIKAPELLVLLFSEGSELLIRELPSILDGSA 246 (378)
Q Consensus 202 ~G~Ii~Q~~~~I~~~dt~~~L~~kl~~~~~~ll~~~l~~l~~g~~ 246 (378)
+||||.|+.++|.++||.++|++|+.+++.+++.++|+.+.+|++
T Consensus 149 ~G~Ii~Q~~v~I~~~dt~~~L~~rl~~~~~~ll~~~l~~~~~g~~ 193 (215)
T 3tqr_A 149 AGPLICQARLSITPQDTPETLKTRVHALEHIIYPEVLSWFAAGRL 193 (215)
T ss_dssp CSCEEEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred CCCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCe
Confidence 999999999999999999999999999999999999999999875
No 22
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=100.00 E-value=5.1e-44 Score=342.76 Aligned_cols=228 Identities=20% Similarity=0.241 Sum_probs=196.2
Q ss_pred CCccccCCcceee--ccccccccccceeeEeeecCCCCCCCCCCCCC------------------CCCCceEEEEecCcc
Q 048078 1 SNFFSLHSGLVED--EKTKEMNSSLMIRRFFCFKGPATSSTTPSAFS------------------VSRKKPLVFLGSPQV 60 (378)
Q Consensus 1 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~rIvf~Gs~~~ 60 (378)
|+|+.-|++||+| |+++.+.-.||||-.|..+.. ..+-.... ..+++||++|.|+.
T Consensus 24 s~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~---~~~~~~L~~~f~~la~~~~m~~~l~~~~~~~ri~vl~Sg~- 99 (288)
T 3obi_A 24 STFLFENGQNILDAQQYNDTESGHFFMRVVFNAAAK---VIPLASLRTGFGVIAAKFTMGWHMRDRETRRKVMLLVSQS- 99 (288)
T ss_dssp HHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEESSC---CCCHHHHHHHHHHHHHHTTCEEEEEETTSCEEEEEEECSC-
T ss_pred HHHHHHCCCcEEeeeeeecCCCCceEEEEEEEcCCC---CCCHHHHHHHHHHHHHHcCCEEEeeccCCCcEEEEEEcCC-
Confidence 4689999999999 777889999999999987521 11111111 35688999999994
Q ss_pred hHHHHHHHHHccCCCCCCceEEEEEcCC-CCCCCCCCccCChHHHHHHHHCCCCCceecCCCCC----CcHHHHHHHHhc
Q 048078 61 SVNVLDALFNASSSPDSIFEVAAIVTQP-PSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERA----GEDAFLSNLRAL 135 (378)
Q Consensus 61 a~~~L~~L~~~~~~~~~~~ei~~Vvt~~-~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~----~~~~~~~~l~~~ 135 (378)
+.||++|+++...+..+.+|++||++. +. +.++|+++|||+.++ ..... .++++++.|++.
T Consensus 100 -g~nl~~ll~~~~~g~l~~~i~~Visn~p~~------------~~~~A~~~gIp~~~~-~~~~~~r~~~~~~~~~~l~~~ 165 (288)
T 3obi_A 100 -DHCLADILYRWRVGDLHMIPTAIVSNHPRE------------TFSGFDFGDIPFYHF-PVNKDTRRQQEAAITALIAQT 165 (288)
T ss_dssp -CHHHHHHHHHHHTTSSCEEEEEEEESSCGG------------GSCCTTTTTCCEEEC-CCCTTTHHHHHHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHCCCCCeEEEEEEcCCChh------------HHHHHHHcCCCEEEe-CCCcccHHHHHHHHHHHHHhc
Confidence 899999999876666778999999987 33 346799999995432 11111 245688999999
Q ss_pred CCcEEEEecCCCcCChhhhcCCCCceEEEccCCCCCCCCchHHHHHHHcCCcEEEEEEEEecCCCCCCCeeEEEEEEeCC
Q 048078 136 QPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDD 215 (378)
Q Consensus 136 ~~Dliv~~~~~~ilp~~il~~~~~g~iNiHpSlLP~yRG~~pi~wai~~g~~~tGvTih~~~~~~D~G~Ii~Q~~~~I~~ 215 (378)
++|++|+++|++|||+++++.+++++||+||||||+|||++|++||+.+|++.+|+|+|+|++++|+||||.|+.++|.+
T Consensus 166 ~~Dlivlagy~~il~~~~l~~~~~~~iNiHpSlLP~~rG~~p~~~A~~~G~~~~G~Tvh~v~~~~D~GpIi~Q~~v~i~~ 245 (288)
T 3obi_A 166 HTDLVVLARYMQILSDEMSARLAGRCINIHHSFLPGFKGAKPYHQAFDRGVKLIGATAHYVTSALDEGPIIDQDVERISH 245 (288)
T ss_dssp TCCEEEESSCCSCCCHHHHHHTTTSEEEEEEECSSCCCSSCHHHHHHHHTCSEEEEEEEECCSSTTCSCEEEEEEEECCT
T ss_pred CCCEEEhhhhhhhCCHHHHhhhcCCeEEeCcccccCCCCchHHHHHHHcCCCEEEEEEEEECCCCcCCCeEEEEEEecCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHhHcCCC
Q 048078 216 QIKAPELLVLLFSEGSELLIRELPSILDGSA 246 (378)
Q Consensus 216 ~dt~~~L~~kl~~~~~~ll~~~l~~l~~g~~ 246 (378)
+||.++|.+|+.+++.+++.++++.+.+|+.
T Consensus 246 ~dt~~~L~~r~~~~e~~~l~~av~~~~~~~~ 276 (288)
T 3obi_A 246 RDTPADLVRKGRDIERRVLSRALHYHLDDRV 276 (288)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhCCE
Confidence 9999999999999999999999999999875
No 23
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=100.00 E-value=2.7e-44 Score=344.44 Aligned_cols=231 Identities=23% Similarity=0.288 Sum_probs=196.2
Q ss_pred CCccccCCcceee--ccccccccccceeeEeeecCCCCCCCCCCCC-------C-------CCCCceEEEEecCcchHHH
Q 048078 1 SNFFSLHSGLVED--EKTKEMNSSLMIRRFFCFKGPATSSTTPSAF-------S-------VSRKKPLVFLGSPQVSVNV 64 (378)
Q Consensus 1 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-------~~~~~rIvf~Gs~~~a~~~ 64 (378)
|+|+.-|++||+| |+++.+.-.||||.-|..++.+ ...-.+.+ . ..+++||++|+|+. +.|
T Consensus 25 s~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~-~~~L~~~f~~la~~~~m~~~l~~~~~~~ri~vl~Sg~--g~n 101 (287)
T 3nrb_A 25 STFLFNNGANIVEAEQFNDEDSSKFFMRVSVEIPVAG-VNDFNSAFGKVVEKYNAEWWFRPRTDRKKVVIMVSKF--DHC 101 (287)
T ss_dssp HHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECCC----CHHHHHHHHHHGGGTCEEEEEETTCCCEEEEEECSC--CHH
T ss_pred HHHHHHCCCCEEeeeeeecCCCCeEEEEEEEEcCCCC-HHHHHHHHHHHHHHcCCeeEeeccCCCcEEEEEEeCC--CcC
Confidence 4789999999999 8888999999999988774211 11111111 0 35688999999995 899
Q ss_pred HHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCC----CCcHHHHHHHHhcCCcEE
Q 048078 65 LDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPER----AGEDAFLSNLRALQPELC 140 (378)
Q Consensus 65 L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~----~~~~~~~~~l~~~~~Dli 140 (378)
|++|+++...+..+.+|++|||+++.+ +.++|+++|||+.++ .... ..++++++.|++.++|++
T Consensus 102 l~~ll~~~~~g~l~~~i~~Visn~~~a-----------~~~~A~~~gIp~~~~-~~~~~~r~~~~~~~~~~l~~~~~Dli 169 (287)
T 3nrb_A 102 LGDLLYRHRLGELDMEVVGIISNHPRE-----------ALSVSLVGDIPFHYL-PVTPATKAAQESQIKNIVTQSQADLI 169 (287)
T ss_dssp HHHHHHHHHHTSSCCEEEEEEESSCGG-----------GCCCCCCTTSCEEEC-CCCGGGHHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHCCCCCeEEEEEEeCChHH-----------HHHHHHHcCCCEEEE-eccCcchhhHHHHHHHHHHHhCCCEE
Confidence 999998766666678999999987641 456799999995432 1111 124578899999999999
Q ss_pred EEecCCCcCChhhhcCCCCceEEEccCCCCCCCCchHHHHHHHcCCcEEEEEEEEecCCCCCCCeeEEEEEEeCCCCCHH
Q 048078 141 ITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQGGAKETGVSLAFTVRALDAGPVIAREKMEVDDQIKAP 220 (378)
Q Consensus 141 v~~~~~~ilp~~il~~~~~g~iNiHpSlLP~yRG~~pi~wai~~g~~~tGvTih~~~~~~D~G~Ii~Q~~~~I~~~dt~~ 220 (378)
|+++|++|||+++++.+++++||+||||||+|||++|++||+.+|++++|+|+|+|++++|+||||.|+.++|.++||.+
T Consensus 170 vlagym~il~~~~l~~~~~~~iNiHpSlLP~~rG~~p~~~Ai~~G~k~tG~Tvh~v~~~lD~GpIi~Q~~v~i~~~dt~~ 249 (287)
T 3nrb_A 170 VLARYMQILSDDLSAFLSGRCINIHHSFLPGFKGAKPYHQAHTRGVKLIGATAHFVTADLDEGPIIAQDVEHVSHRDSAE 249 (287)
T ss_dssp EESSCCSCCCHHHHHHHTTSEEEEESSCTTTTCSSCHHHHHHHHTCSEEEEEEEECCSSSSCCCEEEEEEEECCTTCCHH
T ss_pred EhhhhhhhcCHHHHhhccCCeEEECcccccCCCCchHHHHHHHcCCCeEEEEEEEECCCCcCCCEEEEEEEecCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHcCCC
Q 048078 221 ELLVLLFSEGSELLIRELPSILDGSA 246 (378)
Q Consensus 221 ~L~~kl~~~~~~ll~~~l~~l~~g~~ 246 (378)
+|.+|+.+++.+++.++++.+.+|+.
T Consensus 250 ~L~~r~~~~e~~~l~~av~~~~~~~~ 275 (287)
T 3nrb_A 250 DLVRKGRDIERRVLSRAVLLFLEDRL 275 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCE
Confidence 99999999999999999999998875
No 24
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=95.51 E-value=0.011 Score=57.04 Aligned_cols=74 Identities=14% Similarity=0.112 Sum_probs=51.9
Q ss_pred CCCCCceEEEEecCcchH-HHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCC
Q 048078 45 SVSRKKPLVFLGSPQVSV-NVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERA 123 (378)
Q Consensus 45 ~~~~~~rIvf~Gs~~~a~-~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~ 123 (378)
...+++||+++|.+.++. ..+..|.+. .++++++|+...+ ....++|+++|++ .+.
T Consensus 23 ~~m~~~rigiIG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~~-----------~~~~~~a~~~g~~---~~~---- 79 (350)
T 3rc1_A 23 ANANPIRVGVIGCADIAWRRALPALEAE-----PLTEVTAIASRRW-----------DRAKRFTERFGGE---PVE---- 79 (350)
T ss_dssp ---CCEEEEEESCCHHHHHTHHHHHHHC-----TTEEEEEEEESSH-----------HHHHHHHHHHCSE---EEE----
T ss_pred CCCCceEEEEEcCcHHHHHHHHHHHHhC-----CCeEEEEEEcCCH-----------HHHHHHHHHcCCC---CcC----
Confidence 345689999999999887 577888764 3689988876432 2467889999998 431
Q ss_pred CcHHHHHHHHhcCCcEEEEec
Q 048078 124 GEDAFLSNLRALQPELCITAA 144 (378)
Q Consensus 124 ~~~~~~~~l~~~~~Dliv~~~ 144 (378)
++.+.+++.++|+++++.
T Consensus 80 ---~~~~ll~~~~~D~V~i~t 97 (350)
T 3rc1_A 80 ---GYPALLERDDVDAVYVPL 97 (350)
T ss_dssp ---SHHHHHTCTTCSEEEECC
T ss_pred ---CHHHHhcCCCCCEEEECC
Confidence 133456667899998764
No 25
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=95.34 E-value=0.032 Score=53.92 Aligned_cols=87 Identities=16% Similarity=0.093 Sum_probs=52.9
Q ss_pred CCCCCCCCCCCCCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCc
Q 048078 36 TSSTTPSAFSVSRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPAD 115 (378)
Q Consensus 36 ~~~~~~~~~~~~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~ 115 (378)
|+|-.+.+....+++||+++|.+.++...++.|.+.. .++++++|+...+. ...++|+++|++..
T Consensus 10 ~~~~~~~~~~~m~~~rvgiIG~G~~g~~~~~~l~~~~----~~~~lvav~d~~~~-----------~~~~~a~~~g~~~~ 74 (357)
T 3ec7_A 10 HSSGRENLYFQGMTLKAGIVGIGMIGSDHLRRLANTV----SGVEVVAVCDIVAG-----------RAQAALDKYAIEAK 74 (357)
T ss_dssp ------------CCEEEEEECCSHHHHHHHHHHHHTC----TTEEEEEEECSSTT-----------HHHHHHHHHTCCCE
T ss_pred ccCCccccccCCCeeeEEEECCcHHHHHHHHHHHhhC----CCcEEEEEEeCCHH-----------HHHHHHHHhCCCCe
Confidence 3444445555667899999999999988888887332 36899888764332 46788999996422
Q ss_pred eecCCCCCCcHHHHHHHHhcCCcEEEEecC
Q 048078 116 LIFTPERAGEDAFLSNLRALQPELCITAAY 145 (378)
Q Consensus 116 ~v~~~~~~~~~~~~~~l~~~~~Dliv~~~~ 145 (378)
++. ++.+.+.+.++|+++++.-
T Consensus 75 -~~~-------~~~~ll~~~~~D~V~i~tp 96 (357)
T 3ec7_A 75 -DYN-------DYHDLINDKDVEVVIITAS 96 (357)
T ss_dssp -EES-------SHHHHHHCTTCCEEEECSC
T ss_pred -eeC-------CHHHHhcCCCCCEEEEcCC
Confidence 221 1334566668999987663
No 26
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=93.44 E-value=0.084 Score=50.46 Aligned_cols=74 Identities=12% Similarity=0.105 Sum_probs=51.3
Q ss_pred CCCCceEEEEecCcchHHH-HHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCC
Q 048078 46 VSRKKPLVFLGSPQVSVNV-LDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAG 124 (378)
Q Consensus 46 ~~~~~rIvf~Gs~~~a~~~-L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~ 124 (378)
.+.++||+++|.+.++... +.+|.+. .+++|++|+...+ ....++|+++|+|. ++.
T Consensus 20 ~~~mirigiIG~G~ig~~~~~~~~~~~-----~~~~lvav~d~~~-----------~~a~~~a~~~g~~~--~y~----- 76 (350)
T 4had_A 20 FQSMLRFGIISTAKIGRDNVVPAIQDA-----ENCVVTAIASRDL-----------TRAREMADRFSVPH--AFG----- 76 (350)
T ss_dssp --CCEEEEEESCCHHHHHTHHHHHHHC-----SSEEEEEEECSSH-----------HHHHHHHHHHTCSE--EES-----
T ss_pred ccCccEEEEEcChHHHHHHHHHHHHhC-----CCeEEEEEECCCH-----------HHHHHHHHHcCCCe--eeC-----
Confidence 3557899999999888654 5666553 3689998875432 24688999999982 221
Q ss_pred cHHHHHHHHhcCCcEEEEec
Q 048078 125 EDAFLSNLRALQPELCITAA 144 (378)
Q Consensus 125 ~~~~~~~l~~~~~Dliv~~~ 144 (378)
++.+.|++.++|+++++.
T Consensus 77 --d~~ell~~~~iDaV~I~t 94 (350)
T 4had_A 77 --SYEEMLASDVIDAVYIPL 94 (350)
T ss_dssp --SHHHHHHCSSCSEEEECS
T ss_pred --CHHHHhcCCCCCEEEEeC
Confidence 234556777899998865
No 27
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=93.14 E-value=0.11 Score=49.90 Aligned_cols=72 Identities=8% Similarity=0.031 Sum_probs=51.7
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
+++||+++|.+.++...++.|.+. .++++++|+...+ ....++|+++|++ .+. +
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~-----~~~~lvav~d~~~-----------~~~~~~~~~~g~~---~~~-------~ 57 (354)
T 3db2_A 4 NPVGVAAIGLGRWAYVMADAYTKS-----EKLKLVTCYSRTE-----------DKREKFGKRYNCA---GDA-------T 57 (354)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTC-----SSEEEEEEECSSH-----------HHHHHHHHHHTCC---CCS-------S
T ss_pred CcceEEEEccCHHHHHHHHHHHhC-----CCcEEEEEECCCH-----------HHHHHHHHHcCCC---CcC-------C
Confidence 478999999999888888877653 2688888875332 2467888999998 421 1
Q ss_pred HHHHHHhcCCcEEEEecC
Q 048078 128 FLSNLRALQPELCITAAY 145 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~~ 145 (378)
+.+.+.+.++|+++++.-
T Consensus 58 ~~~~l~~~~~D~V~i~tp 75 (354)
T 3db2_A 58 MEALLAREDVEMVIITVP 75 (354)
T ss_dssp HHHHHHCSSCCEEEECSC
T ss_pred HHHHhcCCCCCEEEEeCC
Confidence 334566678999987653
No 28
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=93.14 E-value=0.16 Score=48.73 Aligned_cols=74 Identities=15% Similarity=0.190 Sum_probs=53.7
Q ss_pred CCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcH
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGED 126 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~ 126 (378)
.+++||+++|.+.++...++.|.+.. .++++++|+...+ ....++++++|++ ++.
T Consensus 11 ~~~~rvgiiG~G~~g~~~~~~l~~~~----~~~~lvav~d~~~-----------~~~~~~~~~~~~~---~~~------- 65 (354)
T 3q2i_A 11 DRKIRFALVGCGRIANNHFGALEKHA----DRAELIDVCDIDP-----------AALKAAVERTGAR---GHA------- 65 (354)
T ss_dssp SSCEEEEEECCSTTHHHHHHHHHHTT----TTEEEEEEECSSH-----------HHHHHHHHHHCCE---EES-------
T ss_pred CCcceEEEEcCcHHHHHHHHHHHhCC----CCeEEEEEEcCCH-----------HHHHHHHHHcCCc---eeC-------
Confidence 35799999999999999998888752 2688888875432 2467888899986 442
Q ss_pred HHHHHHHhcCCcEEEEecC
Q 048078 127 AFLSNLRALQPELCITAAY 145 (378)
Q Consensus 127 ~~~~~l~~~~~Dliv~~~~ 145 (378)
++.+.+++.++|+++++.-
T Consensus 66 ~~~~ll~~~~~D~V~i~tp 84 (354)
T 3q2i_A 66 SLTDMLAQTDADIVILTTP 84 (354)
T ss_dssp CHHHHHHHCCCSEEEECSC
T ss_pred CHHHHhcCCCCCEEEECCC
Confidence 1234566678999987653
No 29
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=93.05 E-value=0.14 Score=50.90 Aligned_cols=79 Identities=11% Similarity=0.119 Sum_probs=50.6
Q ss_pred CCCCceEEEEecCcchH-HHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCC
Q 048078 46 VSRKKPLVFLGSPQVSV-NVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAG 124 (378)
Q Consensus 46 ~~~~~rIvf~Gs~~~a~-~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~ 124 (378)
..+++||+++|.+.++. ..++.|.+. .++++++|+.... ....++++++|++...+....+
T Consensus 80 ~~~~irigiIG~G~~g~~~~~~~l~~~-----~~~~lvav~d~~~-----------~~~~~~a~~~g~~~~~~~~~~~-- 141 (433)
T 1h6d_A 80 EDRRFGYAIVGLGKYALNQILPGFAGC-----QHSRIEALVSGNA-----------EKAKIVAAEYGVDPRKIYDYSN-- 141 (433)
T ss_dssp CCCCEEEEEECCSHHHHHTHHHHTTTC-----SSEEEEEEECSCH-----------HHHHHHHHHTTCCGGGEECSSS--
T ss_pred CCCceEEEEECCcHHHHHHHHHHHhhC-----CCcEEEEEEcCCH-----------HHHHHHHHHhCCCcccccccCC--
Confidence 45679999999998885 677777543 2588888875432 2357789999987210111111
Q ss_pred cHHHHHHHHhcCCcEEEEecC
Q 048078 125 EDAFLSNLRALQPELCITAAY 145 (378)
Q Consensus 125 ~~~~~~~l~~~~~Dliv~~~~ 145 (378)
+.+.+++.++|+++++.-
T Consensus 142 ---~~~ll~~~~vD~V~iatp 159 (433)
T 1h6d_A 142 ---FDKIAKDPKIDAVYIILP 159 (433)
T ss_dssp ---GGGGGGCTTCCEEEECSC
T ss_pred ---HHHHhcCCCCCEEEEcCC
Confidence 123355567999988753
No 30
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=93.00 E-value=0.19 Score=47.74 Aligned_cols=73 Identities=12% Similarity=0.185 Sum_probs=52.7
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
+++||+++|.+.++...++.|.+. .++++++|+.... ....++|+++|++. ++. +
T Consensus 4 ~~~~igiiG~G~~g~~~~~~l~~~-----~~~~l~av~d~~~-----------~~~~~~~~~~~~~~--~~~-------~ 58 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRFVAGLRES-----AQAEVRGIASRRL-----------ENAQKMAKELAIPV--AYG-------S 58 (330)
T ss_dssp CCEEEEECSCCTTHHHHHHHHHHS-----SSEEEEEEBCSSS-----------HHHHHHHHHTTCCC--CBS-------S
T ss_pred CeEEEEEECchHHHHHHHHHHHhC-----CCcEEEEEEeCCH-----------HHHHHHHHHcCCCc--eeC-------C
Confidence 478999999999999999988774 2688888765322 34678899999962 221 1
Q ss_pred HHHHHHhcCCcEEEEecC
Q 048078 128 FLSNLRALQPELCITAAY 145 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~~ 145 (378)
+.+.+.+.++|+++++.-
T Consensus 59 ~~~ll~~~~~D~V~i~tp 76 (330)
T 3e9m_A 59 YEELCKDETIDIIYIPTY 76 (330)
T ss_dssp HHHHHHCTTCSEEEECCC
T ss_pred HHHHhcCCCCCEEEEcCC
Confidence 334566678999987653
No 31
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=92.97 E-value=0.054 Score=53.04 Aligned_cols=70 Identities=17% Similarity=0.334 Sum_probs=47.1
Q ss_pred CCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcH
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGED 126 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~ 126 (378)
++|+||+++|++ |+...++++.+.. .++++++|+..... ..+++|+++|+| ++. +. +
T Consensus 5 ~~~~rv~VvG~G-~g~~h~~a~~~~~----~~~elvav~~~~~~-----------~a~~~a~~~gv~---~~~--~~--~ 61 (372)
T 4gmf_A 5 SPKQRVLIVGAK-FGEMYLNAFMQPP----EGLELVGLLAQGSA-----------RSRELAHAFGIP---LYT--SP--E 61 (372)
T ss_dssp --CEEEEEECST-TTHHHHHTTSSCC----TTEEEEEEECCSSH-----------HHHHHHHHTTCC---EES--SG--G
T ss_pred CCCCEEEEEehH-HHHHHHHHHHhCC----CCeEEEEEECCCHH-----------HHHHHHHHhCCC---EEC--CH--H
Confidence 348999999998 7776777765431 25899999865432 468999999999 553 21 1
Q ss_pred HHHHHHHhcCCcEEEEec
Q 048078 127 AFLSNLRALQPELCITAA 144 (378)
Q Consensus 127 ~~~~~l~~~~~Dliv~~~ 144 (378)
++ + .++|+++++.
T Consensus 62 ~l---~--~~~D~v~i~~ 74 (372)
T 4gmf_A 62 QI---T--GMPDIACIVV 74 (372)
T ss_dssp GC---C--SCCSEEEECC
T ss_pred HH---h--cCCCEEEEEC
Confidence 22 2 2588877653
No 32
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=92.86 E-value=0.17 Score=48.65 Aligned_cols=79 Identities=6% Similarity=-0.027 Sum_probs=50.2
Q ss_pred CCCCceEEEEecCcchHHHHHHHHHcc--CCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCC
Q 048078 46 VSRKKPLVFLGSPQVSVNVLDALFNAS--SSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERA 123 (378)
Q Consensus 46 ~~~~~rIvf~Gs~~~a~~~L~~L~~~~--~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~ 123 (378)
..+|+||+++|.+.++...++++.... -....+.+|++|+...+. ...++|+++|++. ++.
T Consensus 22 ~MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~-----------~a~~~a~~~g~~~--~y~---- 84 (393)
T 4fb5_A 22 SMKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAG-----------LAEARAGEFGFEK--ATA---- 84 (393)
T ss_dssp --CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--T-----------THHHHHHHHTCSE--EES----
T ss_pred CCCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHH-----------HHHHHHHHhCCCe--ecC----
Confidence 356899999999988766555543210 001135799998864332 2578999999982 221
Q ss_pred CcHHHHHHHHhcCCcEEEEec
Q 048078 124 GEDAFLSNLRALQPELCITAA 144 (378)
Q Consensus 124 ~~~~~~~~l~~~~~Dliv~~~ 144 (378)
++.+.|++.++|+++++.
T Consensus 85 ---d~~ell~~~~iDaV~Iat 102 (393)
T 4fb5_A 85 ---DWRALIADPEVDVVSVTT 102 (393)
T ss_dssp ---CHHHHHHCTTCCEEEECS
T ss_pred ---CHHHHhcCCCCcEEEECC
Confidence 234567778899998765
No 33
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=92.72 E-value=0.14 Score=49.88 Aligned_cols=72 Identities=15% Similarity=0.160 Sum_probs=51.3
Q ss_pred CCceEEEEecC-cchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcH
Q 048078 48 RKKPLVFLGSP-QVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGED 126 (378)
Q Consensus 48 ~~~rIvf~Gs~-~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~ 126 (378)
+++||+++|.+ ..+...+..|.+. .++++++|+...+ ....++|+++|++ ++.
T Consensus 1 ~~~rigiiG~G~~~~~~~~~~l~~~-----~~~~l~av~d~~~-----------~~~~~~a~~~g~~---~~~------- 54 (387)
T 3moi_A 1 MKIRFGICGLGFAGSVLMAPAMRHH-----PDAQIVAACDPNE-----------DVRERFGKEYGIP---VFA------- 54 (387)
T ss_dssp CCEEEEEECCSHHHHTTHHHHHHHC-----TTEEEEEEECSCH-----------HHHHHHHHHHTCC---EES-------
T ss_pred CceEEEEEeCCHHHHHHHHHHHHhC-----CCeEEEEEEeCCH-----------HHHHHHHHHcCCC---eEC-------
Confidence 47999999999 6666677777664 3689998875432 2357788999998 542
Q ss_pred HHHHHHHhcCCcEEEEecC
Q 048078 127 AFLSNLRALQPELCITAAY 145 (378)
Q Consensus 127 ~~~~~l~~~~~Dliv~~~~ 145 (378)
++.+.|++.++|+++++.-
T Consensus 55 ~~~ell~~~~vD~V~i~tp 73 (387)
T 3moi_A 55 TLAEMMQHVQMDAVYIASP 73 (387)
T ss_dssp SHHHHHHHSCCSEEEECSC
T ss_pred CHHHHHcCCCCCEEEEcCC
Confidence 1334566678999998653
No 34
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=92.64 E-value=0.25 Score=48.66 Aligned_cols=77 Identities=10% Similarity=0.053 Sum_probs=49.6
Q ss_pred CCCCceEEEEecCc---chHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCC
Q 048078 46 VSRKKPLVFLGSPQ---VSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPER 122 (378)
Q Consensus 46 ~~~~~rIvf~Gs~~---~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~ 122 (378)
..+++||+++|.+. ++...+.++... ..+++++.|+.++. ...+++|+++|+|...++.
T Consensus 34 ~m~~~rvgiiG~G~~~~ig~~h~~~~~~~-----~~~~lva~v~d~~~----------~~a~~~a~~~g~~~~~~~~--- 95 (417)
T 3v5n_A 34 RQKRIRLGMVGGGSGAFIGAVHRIAARLD-----DHYELVAGALSSTP----------EKAEASGRELGLDPSRVYS--- 95 (417)
T ss_dssp -CCCEEEEEESCC--CHHHHHHHHHHHHT-----SCEEEEEEECCSSH----------HHHHHHHHHHTCCGGGBCS---
T ss_pred cCCcceEEEEcCCCchHHHHHHHHHHhhC-----CCcEEEEEEeCCCH----------HHHHHHHHHcCCCcccccC---
Confidence 46789999999998 666777776654 25888875555542 2467889999997211221
Q ss_pred CCcHHHHHHHHh-----cCCcEEEEec
Q 048078 123 AGEDAFLSNLRA-----LQPELCITAA 144 (378)
Q Consensus 123 ~~~~~~~~~l~~-----~~~Dliv~~~ 144 (378)
+ +.+.|+. .++|+++++.
T Consensus 96 -~---~~~ll~~~~~~~~~vD~V~I~t 118 (417)
T 3v5n_A 96 -D---FKEMAIREAKLKNGIEAVAIVT 118 (417)
T ss_dssp -C---HHHHHHHHHHCTTCCSEEEECS
T ss_pred -C---HHHHHhcccccCCCCcEEEECC
Confidence 1 2234444 5799998766
No 35
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=92.53 E-value=0.47 Score=46.28 Aligned_cols=76 Identities=11% Similarity=0.074 Sum_probs=51.2
Q ss_pred CCCceEEEEecCc---chHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCC
Q 048078 47 SRKKPLVFLGSPQ---VSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERA 123 (378)
Q Consensus 47 ~~~~rIvf~Gs~~---~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~ 123 (378)
.+++||+++|.+. ++...+.++... ..++++++|++++. ....++|+++|+|...++.
T Consensus 10 m~~~rvgiiG~G~~~~ig~~h~~~~~~~-----~~~~lva~v~d~~~----------~~a~~~a~~~g~~~~~~~~---- 70 (398)
T 3dty_A 10 PQPIRWAMVGGGSQSQIGYIHRCAALRD-----NTFVLVAGAFDIDP----------IRGSAFGEQLGVDSERCYA---- 70 (398)
T ss_dssp CSCEEEEEEECCTTCSSHHHHHHHHHGG-----GSEEEEEEECCSSH----------HHHHHHHHHTTCCGGGBCS----
T ss_pred cCcceEEEEcCCccchhHHHHHHHHhhC-----CCeEEEEEEeCCCH----------HHHHHHHHHhCCCcceeeC----
Confidence 5689999999998 777787877654 25888886665543 2467889999997211221
Q ss_pred CcHHHHHHHHh-----cCCcEEEEec
Q 048078 124 GEDAFLSNLRA-----LQPELCITAA 144 (378)
Q Consensus 124 ~~~~~~~~l~~-----~~~Dliv~~~ 144 (378)
++.+.|+. .++|+++++.
T Consensus 71 ---~~~~ll~~~~~~~~~vD~V~i~t 93 (398)
T 3dty_A 71 ---DYLSMFEQEARRADGIQAVSIAT 93 (398)
T ss_dssp ---SHHHHHHHHTTCTTCCSEEEEES
T ss_pred ---CHHHHHhcccccCCCCCEEEECC
Confidence 12233443 4699998766
No 36
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=92.47 E-value=0.16 Score=48.51 Aligned_cols=72 Identities=7% Similarity=-0.023 Sum_probs=51.4
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
+++||+++|.+.++...++.|.+. .++++++|+...+ ....++|+++|++ ++. +
T Consensus 3 ~~~rvgiiG~G~~g~~~~~~l~~~-----~~~~l~av~d~~~-----------~~~~~~a~~~g~~---~~~-------~ 56 (344)
T 3euw_A 3 LTLRIALFGAGRIGHVHAANIAAN-----PDLELVVIADPFI-----------EGAQRLAEANGAE---AVA-------S 56 (344)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHC-----TTEEEEEEECSSH-----------HHHHHHHHTTTCE---EES-------S
T ss_pred CceEEEEECCcHHHHHHHHHHHhC-----CCcEEEEEECCCH-----------HHHHHHHHHcCCc---eeC-------C
Confidence 368999999999999888888774 3688888875432 2467788888865 432 1
Q ss_pred HHHHHHhcCCcEEEEecC
Q 048078 128 FLSNLRALQPELCITAAY 145 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~~ 145 (378)
+.+.+++.++|+++++.-
T Consensus 57 ~~~~l~~~~~D~V~i~tp 74 (344)
T 3euw_A 57 PDEVFARDDIDGIVIGSP 74 (344)
T ss_dssp HHHHTTCSCCCEEEECSC
T ss_pred HHHHhcCCCCCEEEEeCC
Confidence 234555668899887764
No 37
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=91.74 E-value=0.17 Score=48.09 Aligned_cols=72 Identities=14% Similarity=0.142 Sum_probs=46.7
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
+++||+++|.+.++...++.|.+. .++++++|+...+.. ..++|+++|++. ++. +
T Consensus 4 ~~~rigiiG~G~ig~~~~~~l~~~-----~~~~~~av~d~~~~~-----------~~~~a~~~~~~~--~~~-------~ 58 (329)
T 3evn_A 4 SKVRYGVVSTAKVAPRFIEGVRLA-----GNGEVVAVSSRTLES-----------AQAFANKYHLPK--AYD-------K 58 (329)
T ss_dssp -CEEEEEEBCCTTHHHHHHHHHHH-----CSEEEEEEECSCSST-----------TCC---CCCCSC--EES-------C
T ss_pred CceEEEEEechHHHHHHHHHHHhC-----CCcEEEEEEcCCHHH-----------HHHHHHHcCCCc--ccC-------C
Confidence 478999999999998888888765 258899887643321 245777888872 221 1
Q ss_pred HHHHHHhcCCcEEEEec
Q 048078 128 FLSNLRALQPELCITAA 144 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~ 144 (378)
+.+.+.+.++|+++++.
T Consensus 59 ~~~ll~~~~~D~V~i~t 75 (329)
T 3evn_A 59 LEDMLADESIDVIYVAT 75 (329)
T ss_dssp HHHHHTCTTCCEEEECS
T ss_pred HHHHhcCCCCCEEEECC
Confidence 23445556789888765
No 38
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=91.69 E-value=0.24 Score=46.99 Aligned_cols=71 Identities=11% Similarity=0.060 Sum_probs=50.6
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
+++||+++|.+.++...++.|.+. .++++++|+...+ ....++|+++|++ + . +
T Consensus 2 m~~~vgiiG~G~~g~~~~~~l~~~-----~~~~l~av~d~~~-----------~~~~~~~~~~~~~---~---~-----~ 54 (331)
T 4hkt_A 2 MTVRFGLLGAGRIGKVHAKAVSGN-----ADARLVAVADAFP-----------AAAEAIAGAYGCE---V---R-----T 54 (331)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHC-----TTEEEEEEECSSH-----------HHHHHHHHHTTCE---E---C-----C
T ss_pred CceEEEEECCCHHHHHHHHHHhhC-----CCcEEEEEECCCH-----------HHHHHHHHHhCCC---c---C-----C
Confidence 478999999999988888888764 3688888865332 2467888899887 2 1 1
Q ss_pred HHHHHHhcCCcEEEEecC
Q 048078 128 FLSNLRALQPELCITAAY 145 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~~ 145 (378)
+.+.+++.++|+++++.-
T Consensus 55 ~~~~l~~~~~D~V~i~tp 72 (331)
T 4hkt_A 55 IDAIEAAADIDAVVICTP 72 (331)
T ss_dssp HHHHHHCTTCCEEEECSC
T ss_pred HHHHhcCCCCCEEEEeCC
Confidence 234455668999887663
No 39
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=91.51 E-value=0.3 Score=46.55 Aligned_cols=74 Identities=11% Similarity=0.117 Sum_probs=51.7
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHHH
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAF 128 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~~ 128 (378)
++||+++|.+.++...++.|.+.. .++++++|+...+ ....++++++|++.. ++. ++
T Consensus 2 ~~rigiIG~G~~g~~~~~~l~~~~----~~~~l~av~d~~~-----------~~~~~~~~~~g~~~~-~~~-------~~ 58 (344)
T 3mz0_A 2 SLRIGVIGTGAIGKEHINRITNKL----SGAEIVAVTDVNQ-----------EAAQKVVEQYQLNAT-VYP-------ND 58 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTC----SSEEEEEEECSSH-----------HHHHHHHHHTTCCCE-EES-------SH
T ss_pred eEEEEEECccHHHHHHHHHHHhhC----CCcEEEEEEcCCH-----------HHHHHHHHHhCCCCe-eeC-------CH
Confidence 689999999999988888887332 3688888875322 246788999997422 221 13
Q ss_pred HHHHHhcCCcEEEEecC
Q 048078 129 LSNLRALQPELCITAAY 145 (378)
Q Consensus 129 ~~~l~~~~~Dliv~~~~ 145 (378)
.+.+++.++|+++++.-
T Consensus 59 ~~ll~~~~~D~V~i~tp 75 (344)
T 3mz0_A 59 DSLLADENVDAVLVTSW 75 (344)
T ss_dssp HHHHHCTTCCEEEECSC
T ss_pred HHHhcCCCCCEEEECCC
Confidence 34566678999988663
No 40
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=91.48 E-value=0.32 Score=48.33 Aligned_cols=75 Identities=13% Similarity=0.096 Sum_probs=51.0
Q ss_pred CCceEEEEec----CcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCC
Q 048078 48 RKKPLVFLGS----PQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERA 123 (378)
Q Consensus 48 ~~~rIvf~Gs----~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~ 123 (378)
+++||+++|. +..+...++.|.+.. .+++|++|+.... ....++|+++|++...++.
T Consensus 19 ~~irvgiIG~g~~gG~~g~~~~~~l~~~~----~~~~lvav~d~~~-----------~~~~~~a~~~g~~~~~~~~---- 79 (438)
T 3btv_A 19 APIRVGFVGLNAAKGWAIKTHYPAILQLS----SQFQITALYSPKI-----------ETSIATIQRLKLSNATAFP---- 79 (438)
T ss_dssp CCEEEEEESCCTTSSSTTTTHHHHHHHTT----TTEEEEEEECSSH-----------HHHHHHHHHTTCTTCEEES----
T ss_pred CCCEEEEEcccCCCChHHHHHHHHHHhcC----CCeEEEEEEeCCH-----------HHHHHHHHHcCCCcceeeC----
Confidence 5799999999 777777888887641 2588988875332 2367889999987211221
Q ss_pred CcHHHHHHHHhcCCcEEEEec
Q 048078 124 GEDAFLSNLRALQPELCITAA 144 (378)
Q Consensus 124 ~~~~~~~~l~~~~~Dliv~~~ 144 (378)
++.+.|.+.++|+++++.
T Consensus 80 ---~~~~ll~~~~vD~V~i~t 97 (438)
T 3btv_A 80 ---TLESFASSSTIDMIVIAI 97 (438)
T ss_dssp ---SHHHHHHCSSCSEEEECS
T ss_pred ---CHHHHhcCCCCCEEEEeC
Confidence 133456667899999865
No 41
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=91.46 E-value=0.14 Score=50.16 Aligned_cols=78 Identities=14% Similarity=0.081 Sum_probs=52.2
Q ss_pred CCCceEEEEecCcchHHHHHHHHHcc---CCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCC
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNAS---SSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERA 123 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~~---~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~ 123 (378)
++|+||+++|.+.++...+++|.+.. .....+++|++|+...+ ....++|+++|++. ++.
T Consensus 24 s~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~-----------~~a~~~a~~~~~~~--~y~---- 86 (412)
T 4gqa_A 24 SARLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQ-----------AMAERHAAKLGAEK--AYG---- 86 (412)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSH-----------HHHHHHHHHHTCSE--EES----
T ss_pred cccceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCH-----------HHHHHHHHHcCCCe--EEC----
Confidence 34799999999998887777776531 01112478888875332 24678999999982 221
Q ss_pred CcHHHHHHHHhcCCcEEEEec
Q 048078 124 GEDAFLSNLRALQPELCITAA 144 (378)
Q Consensus 124 ~~~~~~~~l~~~~~Dliv~~~ 144 (378)
++.+.|++.++|+++++.
T Consensus 87 ---d~~~ll~~~~vD~V~I~t 104 (412)
T 4gqa_A 87 ---DWRELVNDPQVDVVDITS 104 (412)
T ss_dssp ---SHHHHHHCTTCCEEEECS
T ss_pred ---CHHHHhcCCCCCEEEECC
Confidence 234566778899988755
No 42
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=91.38 E-value=0.26 Score=47.52 Aligned_cols=70 Identities=17% Similarity=0.221 Sum_probs=49.3
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
+++||+++|.+.++...++.|.+. .++++++|+...+. -.+.|+++|++ ++. +
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~-----~~~~l~av~d~~~~------------~~~~a~~~g~~---~~~-------~ 56 (359)
T 3e18_A 4 KKYQLVIVGYGGMGSYHVTLASAA-----DNLEVHGVFDILAE------------KREAAAQKGLK---IYE-------S 56 (359)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTS-----TTEEEEEEECSSHH------------HHHHHHTTTCC---BCS-------C
T ss_pred CcCcEEEECcCHHHHHHHHHHHhC-----CCcEEEEEEcCCHH------------HHHHHHhcCCc---eeC-------C
Confidence 479999999999888888877653 26899888754321 23467788987 432 1
Q ss_pred HHHHHHhcCCcEEEEec
Q 048078 128 FLSNLRALQPELCITAA 144 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~ 144 (378)
+.+.|.+.++|+++++.
T Consensus 57 ~~~ll~~~~~D~V~i~t 73 (359)
T 3e18_A 57 YEAVLADEKVDAVLIAT 73 (359)
T ss_dssp HHHHHHCTTCCEEEECS
T ss_pred HHHHhcCCCCCEEEEcC
Confidence 23456667899998765
No 43
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=91.37 E-value=0.33 Score=46.63 Aligned_cols=77 Identities=12% Similarity=0.173 Sum_probs=52.3
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCc-eecCCCCCCcH
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPAD-LIFTPERAGED 126 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~-~v~~~~~~~~~ 126 (378)
+++||+++|.+.++...++.|.+. .++++++|+.... ....++|+++|++.. .++.
T Consensus 5 ~~~~vgiiG~G~ig~~~~~~l~~~-----~~~~lv~v~d~~~-----------~~~~~~a~~~~~~~~~~~~~------- 61 (362)
T 1ydw_A 5 TQIRIGVMGCADIARKVSRAIHLA-----PNATISGVASRSL-----------EKAKAFATANNYPESTKIHG------- 61 (362)
T ss_dssp -CEEEEEESCCTTHHHHHHHHHHC-----TTEEEEEEECSSH-----------HHHHHHHHHTTCCTTCEEES-------
T ss_pred CceEEEEECchHHHHHHHHHHhhC-----CCcEEEEEEcCCH-----------HHHHHHHHHhCCCCCCeeeC-------
Confidence 479999999999998888888764 2588888875432 235788999997411 0221
Q ss_pred HHHHHHHhcCCcEEEEecCCC
Q 048078 127 AFLSNLRALQPELCITAAYGN 147 (378)
Q Consensus 127 ~~~~~l~~~~~Dliv~~~~~~ 147 (378)
++.+.+++.++|+++++.=..
T Consensus 62 ~~~~ll~~~~~D~V~i~tp~~ 82 (362)
T 1ydw_A 62 SYESLLEDPEIDALYVPLPTS 82 (362)
T ss_dssp SHHHHHHCTTCCEEEECCCGG
T ss_pred CHHHHhcCCCCCEEEEcCChH
Confidence 133455666899999876433
No 44
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=91.30 E-value=0.42 Score=46.10 Aligned_cols=70 Identities=11% Similarity=0.058 Sum_probs=47.1
Q ss_pred CceEEEEecCcchHHH-HHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 49 KKPLVFLGSPQVSVNV-LDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~-L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
++||+++|.+..+... +..|.. .++++++|+...+ ....++|+++|++. ++. +
T Consensus 26 ~irvgiiG~G~~~~~~~~~~~~~------~~~~lvav~d~~~-----------~~a~~~a~~~~~~~--~~~-------~ 79 (361)
T 3u3x_A 26 ELRFAAVGLNHNHIYGQVNCLLR------AGARLAGFHEKDD-----------ALAAEFSAVYADAR--RIA-------T 79 (361)
T ss_dssp CCEEEEECCCSTTHHHHHHHHHH------TTCEEEEEECSCH-----------HHHHHHHHHSSSCC--EES-------C
T ss_pred CcEEEEECcCHHHHHHHHHHhhc------CCcEEEEEEcCCH-----------HHHHHHHHHcCCCc--ccC-------C
Confidence 6899999999877544 444432 2689999886432 24678899998652 332 2
Q ss_pred HHHHHHhcCCcEEEEec
Q 048078 128 FLSNLRALQPELCITAA 144 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~ 144 (378)
+.+.|.+.++|+++++.
T Consensus 80 ~~~ll~~~~vD~V~I~t 96 (361)
T 3u3x_A 80 AEEILEDENIGLIVSAA 96 (361)
T ss_dssp HHHHHTCTTCCEEEECC
T ss_pred HHHHhcCCCCCEEEEeC
Confidence 33556667899998754
No 45
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=91.09 E-value=0.87 Score=44.38 Aligned_cols=97 Identities=18% Similarity=0.213 Sum_probs=71.0
Q ss_pred ceEEEEe-cCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCC----
Q 048078 50 KPLVFLG-SPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAG---- 124 (378)
Q Consensus 50 ~rIvf~G-s~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~---- 124 (378)
.||+++| ||.++..+|+.+.+. ..++|+++.++.+. .-+.+.|++++.++..+.......
T Consensus 4 k~i~ILGsTGSIG~~tldVi~~~-----~~~~vvaL~a~~n~----------~~l~~q~~~f~p~~v~v~~~~~~~~~l~ 68 (376)
T 3a06_A 4 RTLVILGATGSIGTQTLDVLKKV-----KGIRLIGISFHSNL----------ELAFKIVKEFNVKNVAITGDVEFEDSSI 68 (376)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHS-----CSEEEEEEEESSCH----------HHHHHHHHHHTCCEEEECSSCCCCCSSS
T ss_pred ceEEEECCCCHHHHHHHHHHHhC-----CCeEEEEEEccCCH----------HHHHHHHHHcCCCEEEEccHHHHHHHHH
Confidence 6899999 598988899988764 25899999875542 357888999998855443333221
Q ss_pred -----cHHHHHHHHhcCCcEEEEecCCCcCChhhhcCCCCceEEEccCCCCCCCCchHHHHHHHcCC
Q 048078 125 -----EDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQGGA 186 (378)
Q Consensus 125 -----~~~~~~~l~~~~~Dliv~~~~~~ilp~~il~~~~~g~iNiHpSlLP~yRG~~pi~wai~~g~ 186 (378)
.+.+.+.+....+|+++.+ .|..-|..|...||..|.
T Consensus 69 ~~~~G~~~l~el~~~~~~D~Vv~A-------------------------ivG~aGL~ptlaAi~aGK 110 (376)
T 3a06_A 69 NVWKGSHSIEEMLEALKPDITMVA-------------------------VSGFSGLRAVLASLEHSK 110 (376)
T ss_dssp EEEESTTHHHHHHHHHCCSEEEEC-------------------------CCSTTHHHHHHHHHHHCS
T ss_pred HHccCHHHHHHHhcCCCCCEEEEE-------------------------eeCHHHHHHHHHHHHCCC
Confidence 2344566666678988876 477889999999999985
No 46
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=90.98 E-value=0.41 Score=45.45 Aligned_cols=75 Identities=8% Similarity=0.061 Sum_probs=50.2
Q ss_pred CCCceEEEEecCcchHHHHHHHH-HccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCc
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALF-NASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGE 125 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~-~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~ 125 (378)
++++||+++|.+.++...++.|. +. .++++++|+...+ ....++|+++|++. ++. +
T Consensus 6 ~~~~~v~iiG~G~ig~~~~~~l~~~~-----~~~~~vav~d~~~-----------~~~~~~a~~~g~~~--~~~--~--- 62 (346)
T 3cea_A 6 RKPLRAAIIGLGRLGERHARHLVNKI-----QGVKLVAACALDS-----------NQLEWAKNELGVET--TYT--N--- 62 (346)
T ss_dssp CCCEEEEEECCSTTHHHHHHHHHHTC-----SSEEEEEEECSCH-----------HHHHHHHHTTCCSE--EES--C---
T ss_pred CCcceEEEEcCCHHHHHHHHHHHhcC-----CCcEEEEEecCCH-----------HHHHHHHHHhCCCc--ccC--C---
Confidence 45799999999999888888887 33 2688888775332 23567788888851 221 1
Q ss_pred HHHHHHHHhcCCcEEEEecCC
Q 048078 126 DAFLSNLRALQPELCITAAYG 146 (378)
Q Consensus 126 ~~~~~~l~~~~~Dliv~~~~~ 146 (378)
+.+.++..++|+++++.-.
T Consensus 63 --~~~~l~~~~~D~V~i~tp~ 81 (346)
T 3cea_A 63 --YKDMIDTENIDAIFIVAPT 81 (346)
T ss_dssp --HHHHHTTSCCSEEEECSCG
T ss_pred --HHHHhcCCCCCEEEEeCCh
Confidence 2234545578888877643
No 47
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=90.88 E-value=0.49 Score=38.92 Aligned_cols=75 Identities=12% Similarity=0.083 Sum_probs=49.7
Q ss_pred CCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcH
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGED 126 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~ 126 (378)
..+.+|+++|.+.++..+.+.|.+. +++++++-.+++ ..+.+++.|++ +..- +..++
T Consensus 5 ~~~~~viIiG~G~~G~~la~~L~~~------g~~v~vid~~~~-------------~~~~~~~~g~~---~i~g-d~~~~ 61 (140)
T 3fwz_A 5 DICNHALLVGYGRVGSLLGEKLLAS------DIPLVVIETSRT-------------RVDELRERGVR---AVLG-NAANE 61 (140)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHT------TCCEEEEESCHH-------------HHHHHHHTTCE---EEES-CTTSH
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHC------CCCEEEEECCHH-------------HHHHHHHcCCC---EEEC-CCCCH
Confidence 4467999999999999999988874 577766544332 23445568887 4332 33455
Q ss_pred HHHHHHHhcCCcEEEEec
Q 048078 127 AFLSNLRALQPELCITAA 144 (378)
Q Consensus 127 ~~~~~l~~~~~Dliv~~~ 144 (378)
++++...-.++|++|++.
T Consensus 62 ~~l~~a~i~~ad~vi~~~ 79 (140)
T 3fwz_A 62 EIMQLAHLECAKWLILTI 79 (140)
T ss_dssp HHHHHTTGGGCSEEEECC
T ss_pred HHHHhcCcccCCEEEEEC
Confidence 666554445788887653
No 48
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=90.86 E-value=0.29 Score=46.46 Aligned_cols=73 Identities=12% Similarity=0.151 Sum_probs=51.3
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHHH
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAF 128 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~~ 128 (378)
++||+++|.+.++...++.|.+.. ...+++++|+.... ....++|+++|+|. ++. ++
T Consensus 2 ~~rigiiG~G~ig~~~~~~l~~~~---~~~~~l~av~d~~~-----------~~a~~~a~~~~~~~--~~~-------~~ 58 (334)
T 3ohs_X 2 ALRWGIVSVGLISSDFTAVLQTLP---RSEHQVVAVAARDL-----------SRAKEFAQKHDIPK--AYG-------SY 58 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSC---TTTEEEEEEECSSH-----------HHHHHHHHHHTCSC--EES-------SH
T ss_pred ccEEEEECchHHHHHHHHHHHhCC---CCCeEEEEEEcCCH-----------HHHHHHHHHcCCCc--ccC-------CH
Confidence 689999999999888888775431 12478888875432 24678999999972 221 23
Q ss_pred HHHHHhcCCcEEEEec
Q 048078 129 LSNLRALQPELCITAA 144 (378)
Q Consensus 129 ~~~l~~~~~Dliv~~~ 144 (378)
.+.|.+.++|+++++.
T Consensus 59 ~~ll~~~~vD~V~i~t 74 (334)
T 3ohs_X 59 EELAKDPNVEVAYVGT 74 (334)
T ss_dssp HHHHHCTTCCEEEECC
T ss_pred HHHhcCCCCCEEEECC
Confidence 3556667899999865
No 49
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=90.71 E-value=0.23 Score=47.32 Aligned_cols=72 Identities=7% Similarity=-0.009 Sum_probs=51.1
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHHH
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAF 128 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~~ 128 (378)
++||+++|.+.++...++.|.+. .++++++|+...+ ....++++++|++. ++. ++
T Consensus 2 ~~rvgiIG~G~~g~~~~~~l~~~-----~~~~l~av~d~~~-----------~~~~~~~~~~~~~~--~~~-------~~ 56 (344)
T 3ezy_A 2 SLRIGVIGLGRIGTIHAENLKMI-----DDAILYAISDVRE-----------DRLREMKEKLGVEK--AYK-------DP 56 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHGGGS-----TTEEEEEEECSCH-----------HHHHHHHHHHTCSE--EES-------SH
T ss_pred eeEEEEEcCCHHHHHHHHHHHhC-----CCcEEEEEECCCH-----------HHHHHHHHHhCCCc--eeC-------CH
Confidence 58999999999888888887663 3688888875432 24678888999872 221 12
Q ss_pred HHHHHhcCCcEEEEecC
Q 048078 129 LSNLRALQPELCITAAY 145 (378)
Q Consensus 129 ~~~l~~~~~Dliv~~~~ 145 (378)
.+.+.+.++|+++++.-
T Consensus 57 ~~ll~~~~~D~V~i~tp 73 (344)
T 3ezy_A 57 HELIEDPNVDAVLVCSS 73 (344)
T ss_dssp HHHHHCTTCCEEEECSC
T ss_pred HHHhcCCCCCEEEEcCC
Confidence 34566668999988764
No 50
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=90.67 E-value=0.39 Score=48.40 Aligned_cols=76 Identities=17% Similarity=0.124 Sum_probs=51.3
Q ss_pred CCCceEEEEec----CcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCC
Q 048078 47 SRKKPLVFLGS----PQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPER 122 (378)
Q Consensus 47 ~~~~rIvf~Gs----~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~ 122 (378)
.+++||+++|. +..+...+..|.+.. .+++|++|+.... ....++|+++|++...++.
T Consensus 37 m~~irvgiIG~g~~GG~~g~~h~~~l~~~~----~~~~lvav~d~~~-----------~~a~~~a~~~g~~~~~~~~--- 98 (479)
T 2nvw_A 37 SRPIRVGFVGLTSGKSWVAKTHFLAIQQLS----SQFQIVALYNPTL-----------KSSLQTIEQLQLKHATGFD--- 98 (479)
T ss_dssp GCCEEEEEECCCSTTSHHHHTHHHHHHHTT----TTEEEEEEECSCH-----------HHHHHHHHHTTCTTCEEES---
T ss_pred CCcCEEEEEcccCCCCHHHHHHHHHHHhcC----CCeEEEEEEeCCH-----------HHHHHHHHHcCCCcceeeC---
Confidence 56899999999 766667778877631 2588988875332 2467889999987211221
Q ss_pred CCcHHHHHHHHhcCCcEEEEec
Q 048078 123 AGEDAFLSNLRALQPELCITAA 144 (378)
Q Consensus 123 ~~~~~~~~~l~~~~~Dliv~~~ 144 (378)
++.+.|++.++|+++++.
T Consensus 99 ----d~~ell~~~~vD~V~I~t 116 (479)
T 2nvw_A 99 ----SLESFAQYKDIDMIVVSV 116 (479)
T ss_dssp ----CHHHHHHCTTCSEEEECS
T ss_pred ----CHHHHhcCCCCCEEEEcC
Confidence 133456667899998865
No 51
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=90.60 E-value=0.37 Score=39.40 Aligned_cols=93 Identities=13% Similarity=0.239 Sum_probs=52.1
Q ss_pred CCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCC---CCcc-CChHHHHHHHHCCCCCceecCCCC
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDR---GRKV-LPSPVAQYALDRGFPADLIFTPER 122 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~gr---g~~~-~~~~v~~~A~~~gIp~~~v~~~~~ 122 (378)
.++.|++++|++..+..+++.|.+. .++++++++...+...|. |... ....+.++++++++... +.....
T Consensus 2 ~~~~~vlIiGaG~~g~~l~~~l~~~-----~g~~vvg~~d~~~~~~g~~i~g~pV~g~~~l~~~~~~~~id~v-iia~~~ 75 (141)
T 3nkl_A 2 NAKKKVLIYGAGSAGLQLANMLRQG-----KEFHPIAFIDDDRKKHKTTMQGITIYRPKYLERLIKKHCISTV-LLAVPS 75 (141)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHS-----SSEEEEEEECSCGGGTTCEETTEEEECGGGHHHHHHHHTCCEE-EECCTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-----CCcEEEEEEECCcccCCCEecCeEEECHHHHHHHHHHCCCCEE-EEeCCC
Confidence 3567999999999888888887654 269999999754432221 1000 12345566666666533 222221
Q ss_pred CCc---HHHHHHHHhcCCcEEEEecC
Q 048078 123 AGE---DAFLSNLRALQPELCITAAY 145 (378)
Q Consensus 123 ~~~---~~~~~~l~~~~~Dliv~~~~ 145 (378)
... .++++.+.+...++.++..+
T Consensus 76 ~~~~~~~~i~~~l~~~gv~v~~vP~~ 101 (141)
T 3nkl_A 76 ASQVQKKVIIESLAKLHVEVLTIPNL 101 (141)
T ss_dssp SCHHHHHHHHHHHHTTTCEEEECCCH
T ss_pred CCHHHHHHHHHHHHHcCCeEEECCCH
Confidence 111 34445555556665555444
No 52
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=90.40 E-value=0.28 Score=45.94 Aligned_cols=70 Identities=13% Similarity=0.117 Sum_probs=47.9
Q ss_pred CCceEEEEecCcchHH-HHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcH
Q 048078 48 RKKPLVFLGSPQVSVN-VLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGED 126 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~-~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~ 126 (378)
+++||+++|.+.++.. .++.|.+. .++++++|+...+ ....++|+++|++ .+ .+
T Consensus 5 ~~~~igiIG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~~-----------~~~~~~a~~~~~~---~~--~~---- 59 (308)
T 3uuw_A 5 KNIKMGMIGLGSIAQKAYLPILTKS-----ERFEFVGAFTPNK-----------VKREKICSDYRIM---PF--DS---- 59 (308)
T ss_dssp CCCEEEEECCSHHHHHHTHHHHTSC-----SSSEEEEEECSCH-----------HHHHHHHHHHTCC---BC--SC----
T ss_pred ccCcEEEEecCHHHHHHHHHHHHhC-----CCeEEEEEECCCH-----------HHHHHHHHHcCCC---Cc--CC----
Confidence 4789999999998886 66666543 3688988876432 2467889999998 32 11
Q ss_pred HHHHHHHhcCCcEEEEecC
Q 048078 127 AFLSNLRALQPELCITAAY 145 (378)
Q Consensus 127 ~~~~~l~~~~~Dliv~~~~ 145 (378)
+.+.++ ++|+++++.-
T Consensus 60 -~~~ll~--~~D~V~i~tp 75 (308)
T 3uuw_A 60 -IESLAK--KCDCIFLHSS 75 (308)
T ss_dssp -HHHHHT--TCSEEEECCC
T ss_pred -HHHHHh--cCCEEEEeCC
Confidence 123333 8999987653
No 53
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=89.92 E-value=0.37 Score=46.00 Aligned_cols=74 Identities=26% Similarity=0.276 Sum_probs=50.8
Q ss_pred CCCceEEEEecC-cchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCc
Q 048078 47 SRKKPLVFLGSP-QVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGE 125 (378)
Q Consensus 47 ~~~~rIvf~Gs~-~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~ 125 (378)
++++||+++|.+ .++...+..|.+.. .++++++|+...+ ....++|+++|++. ++.
T Consensus 16 ~~~irvgiIG~G~~~g~~~~~~l~~~~----~~~~lvav~d~~~-----------~~~~~~a~~~~~~~--~~~------ 72 (340)
T 1zh8_A 16 LRKIRLGIVGCGIAARELHLPALKNLS----HLFEITAVTSRTR-----------SHAEEFAKMVGNPA--VFD------ 72 (340)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHTTT----TTEEEEEEECSSH-----------HHHHHHHHHHSSCE--EES------
T ss_pred CCceeEEEEecCHHHHHHHHHHHHhCC----CceEEEEEEcCCH-----------HHHHHHHHHhCCCc--ccC------
Confidence 458999999999 56666778776531 2588988875332 24678899999852 332
Q ss_pred HHHHHHHHhcCCcEEEEec
Q 048078 126 DAFLSNLRALQPELCITAA 144 (378)
Q Consensus 126 ~~~~~~l~~~~~Dliv~~~ 144 (378)
++.+.|++.++|+++++.
T Consensus 73 -~~~~ll~~~~vD~V~i~t 90 (340)
T 1zh8_A 73 -SYEELLESGLVDAVDLTL 90 (340)
T ss_dssp -CHHHHHHSSCCSEEEECC
T ss_pred -CHHHHhcCCCCCEEEEeC
Confidence 134556667899998765
No 54
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=89.62 E-value=0.75 Score=43.17 Aligned_cols=70 Identities=14% Similarity=0.086 Sum_probs=47.0
Q ss_pred CCceEEEEecCcchHH-HHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcH
Q 048078 48 RKKPLVFLGSPQVSVN-VLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGED 126 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~-~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~ 126 (378)
+++||+++|.+.++.. .++.|.+. .++++++|+...+. ...++++++|++ ++. +.
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~~l~~~-----~~~~lvav~d~~~~-----------~~~~~~~~~g~~---~~~-----~~ 59 (319)
T 1tlt_A 4 KKLRIGVVGLGGIAQKAWLPVLAAA-----SDWTLQGAWSPTRA-----------KALPICESWRIP---YAD-----SL 59 (319)
T ss_dssp -CEEEEEECCSTHHHHTHHHHHHSC-----SSEEEEEEECSSCT-----------THHHHHHHHTCC---BCS-----SH
T ss_pred CcceEEEECCCHHHHHHHHHHHHhC-----CCeEEEEEECCCHH-----------HHHHHHHHcCCC---ccC-----cH
Confidence 4799999999988876 77777653 25888888754332 256788888988 321 11
Q ss_pred HHHHHHHhcCCcEEEEecC
Q 048078 127 AFLSNLRALQPELCITAAY 145 (378)
Q Consensus 127 ~~~~~l~~~~~Dliv~~~~ 145 (378)
+.+ ..++|+++++.-
T Consensus 60 ---~~l-~~~~D~V~i~tp 74 (319)
T 1tlt_A 60 ---SSL-AASCDAVFVHSS 74 (319)
T ss_dssp ---HHH-HTTCSEEEECSC
T ss_pred ---HHh-hcCCCEEEEeCC
Confidence 123 457898887653
No 55
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=89.22 E-value=0.99 Score=42.68 Aligned_cols=71 Identities=11% Similarity=0.092 Sum_probs=44.6
Q ss_pred CCceEEEEecCcchH-HHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcH
Q 048078 48 RKKPLVFLGSPQVSV-NVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGED 126 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~-~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~ 126 (378)
+++||+++|.+..+. ..+..|.. .++++++|+...+.. ..++|++++... ++.
T Consensus 3 ~~~rvgiiG~G~~~~~~~~~~l~~------~~~~lvav~d~~~~~-----------~~~~a~~~~~~~--~~~------- 56 (336)
T 2p2s_A 3 KKIRFAAIGLAHNHIYDMCQQLID------AGAELAGVFESDSDN-----------RAKFTSLFPSVP--FAA------- 56 (336)
T ss_dssp -CCEEEEECCSSTHHHHHHHHHHH------TTCEEEEEECSCTTS-----------CHHHHHHSTTCC--BCS-------
T ss_pred CccEEEEECCChHHHHHhhhhhcC------CCcEEEEEeCCCHHH-----------HHHHHHhcCCCc--ccC-------
Confidence 479999999997765 45566532 268999887643322 357888884331 321
Q ss_pred HHHHHHHhcCCcEEEEec
Q 048078 127 AFLSNLRALQPELCITAA 144 (378)
Q Consensus 127 ~~~~~l~~~~~Dliv~~~ 144 (378)
++.+.|++.++|+++++.
T Consensus 57 ~~~~ll~~~~~D~V~i~t 74 (336)
T 2p2s_A 57 SAEQLITDASIDLIACAV 74 (336)
T ss_dssp CHHHHHTCTTCCEEEECS
T ss_pred CHHHHhhCCCCCEEEEeC
Confidence 123445556788888765
No 56
>4egs_A Ribose 5-phosphate isomerase RPIB; tyrosine phosphatase, dephosphorylation, hydrolase; 2.30A {Thermoanaerobacter tengcongensis}
Probab=88.88 E-value=1.4 Score=38.32 Aligned_cols=102 Identities=16% Similarity=0.202 Sum_probs=47.0
Q ss_pred CCCCCCCCCCCCCCCCCceEEEEecCcchHHHH-HHHHHccC-CCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHC
Q 048078 33 GPATSSTTPSAFSVSRKKPLVFLGSPQVSVNVL-DALFNASS-SPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDR 110 (378)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~rIvf~Gs~~~a~~~L-~~L~~~~~-~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~ 110 (378)
|+..+|-|..+.-...+|||+|+=+++..-.-+ ++|++... .....++|..-=|.+.. +....+..+..+++++
T Consensus 18 ~~~~~~~~~g~~m~~~~mkVLFVC~GNiCRSpmAE~l~r~~~~~~g~~~~v~SAGt~~~~----g~~~~~~a~~~l~~e~ 93 (180)
T 4egs_A 18 GSHMASMTGGQQMGRGSMRVLFVCTGNTCRSPMAEGIFNAKSKALGKDWEAKSAGVFAPE----GFPASSEAVEVLKKEY 93 (180)
T ss_dssp ----------------CCEEEEEESSSSSHHHHHHHHHHHHHHHTTCCCEEEEEETTCCT----TCCCCHHHHHHHHHHH
T ss_pred hhhcccCCCCCcCCCCCeEEEEEeCCCcccCHHHHHHHHHHHHhcCCceEEEEeeecCcC----CCCCChHHHHHHHHHc
Confidence 333444455555567799999999998554433 44443210 00124665544343221 1223334456667889
Q ss_pred CCCCceecCCCCCCcHHHHHHHHhcCCcEEEEecC
Q 048078 111 GFPADLIFTPERAGEDAFLSNLRALQPELCITAAY 145 (378)
Q Consensus 111 gIp~~~v~~~~~~~~~~~~~~l~~~~~Dliv~~~~ 145 (378)
||+... ..+..+..+++ ..+|+||++.-
T Consensus 94 Gidis~-h~sr~l~~~d~------~~~DlIi~Md~ 121 (180)
T 4egs_A 94 GIDISD-HRAKSLREEDL------KGADLVLAMAF 121 (180)
T ss_dssp CCCCTT-CCCCBCCSHHH------HHCSEEEESSH
T ss_pred CcCccc-CcccccChhhC------cCCCEEEEcCH
Confidence 999321 23445554433 25899999864
No 57
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=88.71 E-value=0.52 Score=41.70 Aligned_cols=73 Identities=8% Similarity=0.189 Sum_probs=49.0
Q ss_pred ceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHHHH
Q 048078 50 KPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAFL 129 (378)
Q Consensus 50 ~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~~~ 129 (378)
|||+++|.+.++....+.|.+. +++++.+-.++ ..+.+++++.|++ ++.. +..+++.+
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~------g~~v~vid~~~------------~~~~~l~~~~~~~---~i~g-d~~~~~~l 58 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSR------KYGVVIINKDR------------ELCEEFAKKLKAT---IIHG-DGSHKEIL 58 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT------TCCEEEEESCH------------HHHHHHHHHSSSE---EEES-CTTSHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCeEEEEECCH------------HHHHHHHHHcCCe---EEEc-CCCCHHHH
Confidence 7899999999999999998875 57776553322 2356667777877 4433 33455555
Q ss_pred HHHHhcCCcEEEEec
Q 048078 130 SNLRALQPELCITAA 144 (378)
Q Consensus 130 ~~l~~~~~Dliv~~~ 144 (378)
+...-.++|++|++.
T Consensus 59 ~~a~i~~ad~vi~~~ 73 (218)
T 3l4b_C 59 RDAEVSKNDVVVILT 73 (218)
T ss_dssp HHHTCCTTCEEEECC
T ss_pred HhcCcccCCEEEEec
Confidence 554445789888653
No 58
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=88.62 E-value=0.86 Score=36.51 Aligned_cols=74 Identities=8% Similarity=0.067 Sum_probs=44.1
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHHH
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAF 128 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~~ 128 (378)
.|+|+++|.+.++....+.|.+. +++|+.+ ...+ ..+.+++++.|+. +... +..+.+.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~------g~~v~~~-d~~~-----------~~~~~~~~~~~~~---~~~~-d~~~~~~ 61 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEK------GHDIVLI-DIDK-----------DICKKASAEIDAL---VING-DCTKIKT 61 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT------TCEEEEE-ESCH-----------HHHHHHHHHCSSE---EEES-CTTSHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCeEEEE-ECCH-----------HHHHHHHHhcCcE---EEEc-CCCCHHH
Confidence 58999999999998888888774 5776544 2211 1345555566776 3322 2223333
Q ss_pred HHHHHhcCCcEEEEec
Q 048078 129 LSNLRALQPELCITAA 144 (378)
Q Consensus 129 ~~~l~~~~~Dliv~~~ 144 (378)
+....-.++|+++++.
T Consensus 62 l~~~~~~~~d~vi~~~ 77 (140)
T 1lss_A 62 LEDAGIEDADMYIAVT 77 (140)
T ss_dssp HHHTTTTTCSEEEECC
T ss_pred HHHcCcccCCEEEEee
Confidence 3322224689888764
No 59
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=88.53 E-value=0.2 Score=48.11 Aligned_cols=78 Identities=12% Similarity=0.033 Sum_probs=51.4
Q ss_pred CCCceEEEEecCcchHHHHHHHHHccC--CCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCC
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNASS--SPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAG 124 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~~~--~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~ 124 (378)
.+++||+++|.+.++...+++|.+... ......+|++|+...+ ...+++|+++|++. ++.
T Consensus 4 M~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~-----------~~a~~~a~~~g~~~--~~~----- 65 (390)
T 4h3v_A 4 MTNLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDA-----------EAVRAAAGKLGWST--TET----- 65 (390)
T ss_dssp CCEEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSH-----------HHHHHHHHHHTCSE--EES-----
T ss_pred CCcCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCH-----------HHHHHHHHHcCCCc--ccC-----
Confidence 457899999999888777777654310 0011347888765322 24678999999983 221
Q ss_pred cHHHHHHHHhcCCcEEEEec
Q 048078 125 EDAFLSNLRALQPELCITAA 144 (378)
Q Consensus 125 ~~~~~~~l~~~~~Dliv~~~ 144 (378)
++.+.|++.++|+++++.
T Consensus 66 --d~~~ll~~~~iDaV~I~t 83 (390)
T 4h3v_A 66 --DWRTLLERDDVQLVDVCT 83 (390)
T ss_dssp --CHHHHTTCTTCSEEEECS
T ss_pred --CHHHHhcCCCCCEEEEeC
Confidence 234556777899998765
No 60
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=88.11 E-value=0.71 Score=43.83 Aligned_cols=75 Identities=12% Similarity=0.198 Sum_probs=48.6
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
+++||+++|.+.++...++.| . .+++|++|+...+..+ ...+.+.++++|++.. ++. +
T Consensus 1 M~~rvgiiG~G~~~~~~~~~l--~-----~~~~lvav~d~~~~~~-------~~~~~~~~~~~~~~~~-~~~-------~ 58 (337)
T 3ip3_A 1 MSLKICVIGSSGHFRYALEGL--D-----EECSITGIAPGVPEED-------LSKLEKAISEMNIKPK-KYN-------N 58 (337)
T ss_dssp -CEEEEEECSSSCHHHHHTTC--C-----TTEEEEEEECSSTTCC-------CHHHHHHHHTTTCCCE-ECS-------S
T ss_pred CceEEEEEccchhHHHHHHhc--C-----CCcEEEEEecCCchhh-------HHHHHHHHHHcCCCCc-ccC-------C
Confidence 368999999988777666665 1 3799999986443111 1245677777888522 221 2
Q ss_pred HHHHHHhcCCcEEEEec
Q 048078 128 FLSNLRALQPELCITAA 144 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~ 144 (378)
+.+.|.+.++|+++++.
T Consensus 59 ~~~ll~~~~vD~V~I~t 75 (337)
T 3ip3_A 59 WWEMLEKEKPDILVINT 75 (337)
T ss_dssp HHHHHHHHCCSEEEECS
T ss_pred HHHHhcCCCCCEEEEeC
Confidence 33556667899998764
No 61
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=87.36 E-value=1.8 Score=41.06 Aligned_cols=74 Identities=12% Similarity=0.174 Sum_probs=48.7
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
+++||+++|++.++...++.|.+.. .++++++|+...+.. ...++|+++|++ ... ..
T Consensus 3 ~~irVaIIG~G~iG~~~~~~l~~~~----~~~elvav~d~~~~~----------~~~~~a~~~g~~---~~~------~~ 59 (312)
T 1nvm_B 3 QKLKVAIIGSGNIGTDLMIKVLRNA----KYLEMGAMVGIDAAS----------DGLARAQRMGVT---TTY------AG 59 (312)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHC----SSEEEEEEECSCTTC----------HHHHHHHHTTCC---EES------SH
T ss_pred CCCEEEEEcCcHHHHHHHHHHHhhC----cCeEEEEEEeCChhh----------hHHHHHHHcCCC---ccc------CC
Confidence 4799999999999888888886622 368888887643321 236788889887 321 12
Q ss_pred HHHHHHh---cCCcEEEEec
Q 048078 128 FLSNLRA---LQPELCITAA 144 (378)
Q Consensus 128 ~~~~l~~---~~~Dliv~~~ 144 (378)
..+.++. .++|+++.+.
T Consensus 60 ~e~ll~~~~~~~iDvV~~at 79 (312)
T 1nvm_B 60 VEGLIKLPEFADIDFVFDAT 79 (312)
T ss_dssp HHHHHHSGGGGGEEEEEECS
T ss_pred HHHHHhccCCCCCcEEEECC
Confidence 2233444 4678887764
No 62
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=87.26 E-value=1.1 Score=44.34 Aligned_cols=80 Identities=14% Similarity=0.211 Sum_probs=50.2
Q ss_pred CCCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHH---HCCCCCceecCCCC
Q 048078 46 VSRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYAL---DRGFPADLIFTPER 122 (378)
Q Consensus 46 ~~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~---~~gIp~~~v~~~~~ 122 (378)
..+++||+++|.+.++...+..|.+. .+++|++|+...+. ...++|+ ++|+|...++..
T Consensus 17 ~~~~~rvgiIG~G~~g~~h~~~l~~~-----~~~~lvav~d~~~~-----------~~~~~a~~~~~~g~~~~~~~~~-- 78 (444)
T 2ixa_A 17 NPKKVRIAFIAVGLRGQTHVENMARR-----DDVEIVAFADPDPY-----------MVGRAQEILKKNGKKPAKVFGN-- 78 (444)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHTC-----TTEEEEEEECSCHH-----------HHHHHHHHHHHTTCCCCEEECS--
T ss_pred CCCCceEEEEecCHHHHHHHHHHHhC-----CCcEEEEEEeCCHH-----------HHHHHHHHHHhcCCCCCceecc--
Confidence 35679999999999888888877653 36899888753321 2445554 578752113321
Q ss_pred CCcHHHHHHHHhcCCcEEEEec
Q 048078 123 AGEDAFLSNLRALQPELCITAA 144 (378)
Q Consensus 123 ~~~~~~~~~l~~~~~Dliv~~~ 144 (378)
.+.++.+.|++.++|+++++.
T Consensus 79 -~~~~~~~ll~~~~vD~V~i~t 99 (444)
T 2ixa_A 79 -GNDDYKNMLKDKNIDAVFVSS 99 (444)
T ss_dssp -STTTHHHHTTCTTCCEEEECC
T ss_pred -CCCCHHHHhcCCCCCEEEEcC
Confidence 111344556667899998866
No 63
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=86.72 E-value=0.66 Score=44.57 Aligned_cols=72 Identities=8% Similarity=0.019 Sum_probs=47.5
Q ss_pred CCceEEEEecCcchHH-HHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcH
Q 048078 48 RKKPLVFLGSPQVSVN-VLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGED 126 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~-~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~ 126 (378)
+++||+++|.+.++.. .++.|.+. .++++++|+...+ ....++|++++... ++.
T Consensus 4 ~~~rigiIG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~~-----------~~~~~~a~~~~~~~--~~~------- 58 (359)
T 3m2t_A 4 SLIKVGLVGIGAQMQENLLPSLLQM-----QDIRIVAACDSDL-----------ERARRVHRFISDIP--VLD------- 58 (359)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTC-----TTEEEEEEECSSH-----------HHHGGGGGTSCSCC--EES-------
T ss_pred CcceEEEECCCHHHHHHHHHHHHhC-----CCcEEEEEEcCCH-----------HHHHHHHHhcCCCc--ccC-------
Confidence 4789999999988875 67777653 2688888875432 13456666765431 331
Q ss_pred HHHHHHHhcCCcEEEEec
Q 048078 127 AFLSNLRALQPELCITAA 144 (378)
Q Consensus 127 ~~~~~l~~~~~Dliv~~~ 144 (378)
++.+.|.+.++|+++++.
T Consensus 59 ~~~~ll~~~~vD~V~i~t 76 (359)
T 3m2t_A 59 NVPAMLNQVPLDAVVMAG 76 (359)
T ss_dssp SHHHHHHHSCCSEEEECS
T ss_pred CHHHHhcCCCCCEEEEcC
Confidence 233556667899998764
No 64
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=86.50 E-value=1.3 Score=42.09 Aligned_cols=39 Identities=13% Similarity=0.197 Sum_probs=30.0
Q ss_pred CCCCCceEEEEecCcchH-HHHHHHHHccCCCCCCceEEEEEcCC
Q 048078 45 SVSRKKPLVFLGSPQVSV-NVLDALFNASSSPDSIFEVAAIVTQP 88 (378)
Q Consensus 45 ~~~~~~rIvf~Gs~~~a~-~~L~~L~~~~~~~~~~~ei~~Vvt~~ 88 (378)
+..+++||+++|.+.++. ..+++|.+. .++++++|+...
T Consensus 21 ~~M~~~rvgiiG~G~ig~~~~~~~l~~~-----~~~~lvav~d~~ 60 (330)
T 4ew6_A 21 QSMSPINLAIVGVGKIVRDQHLPSIAKN-----ANFKLVATASRH 60 (330)
T ss_dssp CCCCCEEEEEECCSHHHHHTHHHHHHHC-----TTEEEEEEECSS
T ss_pred ccCCCceEEEEecCHHHHHHHHHHHHhC-----CCeEEEEEEeCC
Confidence 345679999999998887 578888764 368999987543
No 65
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=86.46 E-value=0.8 Score=43.10 Aligned_cols=73 Identities=15% Similarity=0.181 Sum_probs=48.6
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHHH
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAF 128 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~~ 128 (378)
++||+++|.+.++...++.|.+. .++++++|+.... ....++|+++|++. ++. + +
T Consensus 1 ~~~vgiiG~G~~g~~~~~~l~~~-----~~~~~~~v~d~~~-----------~~~~~~~~~~~~~~--~~~-----~--~ 55 (325)
T 2ho3_A 1 MLKLGVIGTGAISHHFIEAAHTS-----GEYQLVAIYSRKL-----------ETAATFASRYQNIQ--LFD-----Q--L 55 (325)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-----TSEEEEEEECSSH-----------HHHHHHGGGSSSCE--EES-----C--H
T ss_pred CeEEEEEeCCHHHHHHHHHHHhC-----CCeEEEEEEeCCH-----------HHHHHHHHHcCCCe--EeC-----C--H
Confidence 48999999999988888888764 2588888775322 23567777888741 221 1 2
Q ss_pred HHHHHhcCCcEEEEecCCC
Q 048078 129 LSNLRALQPELCITAAYGN 147 (378)
Q Consensus 129 ~~~l~~~~~Dliv~~~~~~ 147 (378)
.+.+ +.++|+++++.-..
T Consensus 56 ~~~l-~~~~D~V~i~tp~~ 73 (325)
T 2ho3_A 56 EVFF-KSSFDLVYIASPNS 73 (325)
T ss_dssp HHHH-TSSCSEEEECSCGG
T ss_pred HHHh-CCCCCEEEEeCChH
Confidence 2345 56788888776433
No 66
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=85.00 E-value=1.9 Score=33.30 Aligned_cols=73 Identities=14% Similarity=0.131 Sum_probs=42.3
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCC-ceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcH
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSI-FEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGED 126 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~-~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~ 126 (378)
..+||+++|.+.++..+.+.|.+. + ++|+++--+++ .+.. +.+.++. +...+-.+.+
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~------g~~~v~~~~r~~~------------~~~~-~~~~~~~---~~~~d~~~~~ 61 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTS------SNYSVTVADHDLA------------ALAV-LNRMGVA---TKQVDAKDEA 61 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHC------SSEEEEEEESCHH------------HHHH-HHTTTCE---EEECCTTCHH
T ss_pred CcCeEEEECCCHHHHHHHHHHHhC------CCceEEEEeCCHH------------HHHH-HHhCCCc---EEEecCCCHH
Confidence 357999999988888888888875 4 66544332211 2223 3355665 3222222233
Q ss_pred HHHHHHHhcCCcEEEEec
Q 048078 127 AFLSNLRALQPELCITAA 144 (378)
Q Consensus 127 ~~~~~l~~~~~Dliv~~~ 144 (378)
++.+.++ ++|++|.+.
T Consensus 62 ~~~~~~~--~~d~vi~~~ 77 (118)
T 3ic5_A 62 GLAKALG--GFDAVISAA 77 (118)
T ss_dssp HHHHHTT--TCSEEEECS
T ss_pred HHHHHHc--CCCEEEECC
Confidence 4444442 789988765
No 67
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=84.41 E-value=1.4 Score=35.77 Aligned_cols=72 Identities=17% Similarity=0.218 Sum_probs=45.5
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHHH
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAF 128 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~~ 128 (378)
.++|+++|.+.++..+.+.|.+. +++|+++-.+++ ..+.+.+.|+. +.. .+..+++.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~------g~~V~~id~~~~-------------~~~~~~~~~~~---~~~-gd~~~~~~ 62 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAA------GKKVLAVDKSKE-------------KIELLEDEGFD---AVI-ADPTDESF 62 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT------TCCEEEEESCHH-------------HHHHHHHTTCE---EEE-CCTTCHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC------CCeEEEEECCHH-------------HHHHHHHCCCc---EEE-CCCCCHHH
Confidence 45899999999988888888875 577765533221 23444556776 333 23445665
Q ss_pred HHHHHhcCCcEEEEe
Q 048078 129 LSNLRALQPELCITA 143 (378)
Q Consensus 129 ~~~l~~~~~Dliv~~ 143 (378)
++.+.-.++|++|++
T Consensus 63 l~~~~~~~~d~vi~~ 77 (141)
T 3llv_A 63 YRSLDLEGVSAVLIT 77 (141)
T ss_dssp HHHSCCTTCSEEEEC
T ss_pred HHhCCcccCCEEEEe
Confidence 555434468887753
No 68
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=83.35 E-value=2.9 Score=39.19 Aligned_cols=81 Identities=16% Similarity=0.149 Sum_probs=48.5
Q ss_pred CCceEEEEec-CcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHH--HHHHHCCCCCceecCCCCCC
Q 048078 48 RKKPLVFLGS-PQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVA--QYALDRGFPADLIFTPERAG 124 (378)
Q Consensus 48 ~~~rIvf~Gs-~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~--~~A~~~gIp~~~v~~~~~~~ 124 (378)
.++||++.|. +.++..+++.|++. +++|.++.-+++.. +.... +.....++. +...+-.+
T Consensus 9 ~~~~IlVtGatG~iG~~l~~~L~~~------g~~V~~l~R~~~~~--------~~~~~~~~~l~~~~v~---~~~~Dl~d 71 (346)
T 3i6i_A 9 PKGRVLIAGATGFIGQFVATASLDA------HRPTYILARPGPRS--------PSKAKIFKALEDKGAI---IVYGLINE 71 (346)
T ss_dssp --CCEEEECTTSHHHHHHHHHHHHT------TCCEEEEECSSCCC--------HHHHHHHHHHHHTTCE---EEECCTTC
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHC------CCCEEEEECCCCCC--------hhHHHHHHHHHhCCcE---EEEeecCC
Confidence 3679999996 66777788888875 57777665433211 01111 122346776 44333333
Q ss_pred cHHHHHHHHhcCCcEEEEecC
Q 048078 125 EDAFLSNLRALQPELCITAAY 145 (378)
Q Consensus 125 ~~~~~~~l~~~~~Dliv~~~~ 145 (378)
.+++.+.+++.++|++|.+.-
T Consensus 72 ~~~l~~~~~~~~~d~Vi~~a~ 92 (346)
T 3i6i_A 72 QEAMEKILKEHEIDIVVSTVG 92 (346)
T ss_dssp HHHHHHHHHHTTCCEEEECCC
T ss_pred HHHHHHHHhhCCCCEEEECCc
Confidence 455667777778999988764
No 69
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=83.24 E-value=1.6 Score=40.93 Aligned_cols=70 Identities=13% Similarity=0.142 Sum_probs=47.2
Q ss_pred ceEEEEecCcchHHH-HHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHHH
Q 048078 50 KPLVFLGSPQVSVNV-LDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAF 128 (378)
Q Consensus 50 ~rIvf~Gs~~~a~~~-L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~~ 128 (378)
|||+++|.+.++... ++.|.+ . ++++++|+...+ ....++++++|++. ++. + +
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~-~-----~~~~vav~d~~~-----------~~~~~~~~~~g~~~--~~~-----~--~ 54 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRA-T-----GGEVVSMMSTSA-----------ERGAAYATENGIGK--SVT-----S--V 54 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHH-T-----TCEEEEEECSCH-----------HHHHHHHHHTTCSC--CBS-----C--H
T ss_pred CeEEEEcccHHHHHhhhHHhhc-C-----CCeEEEEECCCH-----------HHHHHHHHHcCCCc--ccC-----C--H
Confidence 689999999988876 677765 2 588888875332 23567888999862 111 1 2
Q ss_pred HHHHHhcCCcEEEEecC
Q 048078 129 LSNLRALQPELCITAAY 145 (378)
Q Consensus 129 ~~~l~~~~~Dliv~~~~ 145 (378)
.+.+++.++|+++++.-
T Consensus 55 ~~~l~~~~~D~V~i~tp 71 (332)
T 2glx_A 55 EELVGDPDVDAVYVSTT 71 (332)
T ss_dssp HHHHTCTTCCEEEECSC
T ss_pred HHHhcCCCCCEEEEeCC
Confidence 24455557999987653
No 70
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=83.12 E-value=1.3 Score=42.25 Aligned_cols=72 Identities=14% Similarity=0.007 Sum_probs=45.0
Q ss_pred CCceEEEEecCcchHH-HHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcH
Q 048078 48 RKKPLVFLGSPQVSVN-VLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGED 126 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~-~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~ 126 (378)
+++||+++|.+.++.. .+..|.+. .++++++|+... . ..++|++++++-..++. +
T Consensus 1 M~~rvgiiG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~-~------------~~~~a~~~~~~~~~~~~--~---- 56 (349)
T 3i23_A 1 MTVKMGFIGFGKSANRYHLPYVMIR-----ETLEVKTIFDLH-V------------NEKAAAPFKEKGVNFTA--D---- 56 (349)
T ss_dssp CCEEEEEECCSHHHHHTTHHHHTTC-----TTEEEEEEECTT-C------------CHHHHHHHHTTTCEEES--C----
T ss_pred CeeEEEEEccCHHHHHHHHHHHhhC-----CCeEEEEEECCC-H------------HHHHHHhhCCCCCeEEC--C----
Confidence 3689999999987763 55555432 368999998643 1 25677775444111332 1
Q ss_pred HHHHHHHhcCCcEEEEec
Q 048078 127 AFLSNLRALQPELCITAA 144 (378)
Q Consensus 127 ~~~~~l~~~~~Dliv~~~ 144 (378)
+.+.|.+.++|+++++.
T Consensus 57 -~~~ll~~~~~D~V~i~t 73 (349)
T 3i23_A 57 -LNELLTDPEIELITICT 73 (349)
T ss_dssp -THHHHSCTTCCEEEECS
T ss_pred -HHHHhcCCCCCEEEEeC
Confidence 22445566799988765
No 71
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=82.83 E-value=1.6 Score=42.96 Aligned_cols=73 Identities=15% Similarity=0.151 Sum_probs=44.9
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
.+++|+++|.+.++..+.+.|.+. +++++.|=.+++ ..+.+++.|++ ++. .+..+++
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~~------g~~vvvId~d~~-------------~v~~~~~~g~~---vi~-GDat~~~ 59 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLSS------GVKMVVLDHDPD-------------HIETLRKFGMK---VFY-GDATRMD 59 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHT------TCCEEEEECCHH-------------HHHHHHHTTCC---CEE-SCTTCHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC------CCCEEEEECCHH-------------HHHHHHhCCCe---EEE-cCCCCHH
Confidence 467999999999999999988875 577766544432 23455577877 332 2233444
Q ss_pred HHHHHHhcCCcEEEEe
Q 048078 128 FLSNLRALQPELCITA 143 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~ 143 (378)
+++...-.++|++|++
T Consensus 60 ~L~~agi~~A~~viv~ 75 (413)
T 3l9w_A 60 LLESAGAAKAEVLINA 75 (413)
T ss_dssp HHHHTTTTTCSEEEEC
T ss_pred HHHhcCCCccCEEEEC
Confidence 4444433455655543
No 72
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=81.87 E-value=1.9 Score=40.44 Aligned_cols=69 Identities=13% Similarity=0.122 Sum_probs=45.2
Q ss_pred CceEEEEecCcchHH-HHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 49 KKPLVFLGSPQVSVN-VLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~-~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
++||+|+|.+.++.. .++.|.+. .+++++ |+ +++. ....++|+++|++.. +. + ..
T Consensus 2 ~~~igiIG~G~ig~~~~~~~l~~~-----~~~~l~-v~-d~~~----------~~~~~~a~~~g~~~~--~~-~---~~- 57 (323)
T 1xea_A 2 SLKIAMIGLGDIAQKAYLPVLAQW-----PDIELV-LC-TRNP----------KVLGTLATRYRVSAT--CT-D---YR- 57 (323)
T ss_dssp CEEEEEECCCHHHHHTHHHHHTTS-----TTEEEE-EE-CSCH----------HHHHHHHHHTTCCCC--CS-S---TT-
T ss_pred CcEEEEECCCHHHHHHHHHHHHhC-----CCceEE-EE-eCCH----------HHHHHHHHHcCCCcc--cc-C---HH-
Confidence 589999999988774 77777543 257877 54 4432 246778999998821 21 1 11
Q ss_pred HHHHHHhcCCcEEEEec
Q 048078 128 FLSNLRALQPELCITAA 144 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~ 144 (378)
+.| ..++|+++++.
T Consensus 58 --~~l-~~~~D~V~i~t 71 (323)
T 1xea_A 58 --DVL-QYGVDAVMIHA 71 (323)
T ss_dssp --GGG-GGCCSEEEECS
T ss_pred --HHh-hcCCCEEEEEC
Confidence 224 45899998865
No 73
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=81.65 E-value=1.4 Score=44.12 Aligned_cols=75 Identities=12% Similarity=0.197 Sum_probs=49.1
Q ss_pred CCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcH
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGED 126 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~ 126 (378)
+..|||+++|.+.++....+.|.+. +++|+.|=.++ ..+..++.++++. +.. .+..++
T Consensus 1 ~~~M~iiI~G~G~vG~~la~~L~~~------~~~v~vId~d~------------~~~~~~~~~~~~~---~i~-Gd~~~~ 58 (461)
T 4g65_A 1 SNAMKIIILGAGQVGGTLAENLVGE------NNDITIVDKDG------------DRLRELQDKYDLR---VVN-GHASHP 58 (461)
T ss_dssp -CCEEEEEECCSHHHHHHHHHTCST------TEEEEEEESCH------------HHHHHHHHHSSCE---EEE-SCTTCH
T ss_pred CCcCEEEEECCCHHHHHHHHHHHHC------CCCEEEEECCH------------HHHHHHHHhcCcE---EEE-EcCCCH
Confidence 3579999999999988877777543 67776443322 2466777788887 443 334456
Q ss_pred HHHHHHHhcCCcEEEEe
Q 048078 127 AFLSNLRALQPELCITA 143 (378)
Q Consensus 127 ~~~~~l~~~~~Dliv~~ 143 (378)
++++...-.++|++|.+
T Consensus 59 ~~L~~Agi~~ad~~ia~ 75 (461)
T 4g65_A 59 DVLHEAGAQDADMLVAV 75 (461)
T ss_dssp HHHHHHTTTTCSEEEEC
T ss_pred HHHHhcCCCcCCEEEEE
Confidence 66665555667776654
No 74
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=81.18 E-value=0.65 Score=43.57 Aligned_cols=36 Identities=8% Similarity=0.142 Sum_probs=28.8
Q ss_pred CCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcC
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQ 87 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~ 87 (378)
++++||+++|.+.++...++.|.+. .++++++|+..
T Consensus 8 ~~~~~igiIG~G~~g~~~~~~l~~~-----~~~~~v~v~d~ 43 (315)
T 3c1a_A 8 NSPVRLALIGAGRWGKNYIRTIAGL-----PGAALVRLASS 43 (315)
T ss_dssp -CCEEEEEEECTTTTTTHHHHHHHC-----TTEEEEEEEES
T ss_pred CCcceEEEECCcHHHHHHHHHHHhC-----CCcEEEEEEeC
Confidence 4579999999999998888888774 25888888764
No 75
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=81.02 E-value=1.8 Score=43.67 Aligned_cols=114 Identities=17% Similarity=0.141 Sum_probs=68.5
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHHH
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAF 128 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~~ 128 (378)
-.||+++|.+.......+.|.+. +++++++.|..... .....+.+..+.... ++ ++.+..++
T Consensus 332 GKrv~i~~~~~~~~~l~~~L~El------Gmevv~~gt~~~~~---------~d~~~~~~~l~~~~~-i~--~d~d~~el 393 (483)
T 3pdi_A 332 GKRVLLYTGGVKSWSVVSALQDL------GMKVVATGTKKSTE---------EDKARIRELMGDDVK-ML--DEGNARVL 393 (483)
T ss_dssp TCEEEEECSSSCHHHHHHHHHHH------TCEEEEECBSSSCH---------HHHHHHHHHSCSSCC-BC--CSCSHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHC------CCEEEEEecCCCCH---------HHHHHHHHhcCCCCE-EE--eCCCHHHH
Confidence 46999999888888777777664 79998877653221 112233333443322 22 23345678
Q ss_pred HHHHHhcCCcEEEEecCCCcCChhhhcCCCCceEEEccC-CCC--CCCCchHHHHHHHc
Q 048078 129 LSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPS-LLP--LYRGAAPVQRALQG 184 (378)
Q Consensus 129 ~~~l~~~~~Dliv~~~~~~ilp~~il~~~~~g~iNiHpS-lLP--~yRG~~pi~wai~~ 184 (378)
.+.+++.+||++|.-++.+.+..+. .. .++.+|.. ..| -|+|+.-+...|.|
T Consensus 394 ~~~i~~~~pDL~ig~~~~~~~a~k~-gI---P~~~~~~~~~~p~~GY~G~~~l~~~i~~ 448 (483)
T 3pdi_A 394 LKTVDEYQADILIAGGRNMYTALKG-RV---PFLDINQEREFGYAGYDGMLELVRQLCI 448 (483)
T ss_dssp HHHHHHTTCSEEECCGGGHHHHHHT-TC---CBCCCCSSSSCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCEEEECCchhHHHHHc-CC---CEEEecCccccCcchhhHHHHHHHHHHH
Confidence 8889999999999887776664442 22 23444432 234 37886555544443
No 76
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=80.42 E-value=4.2 Score=39.83 Aligned_cols=53 Identities=15% Similarity=0.197 Sum_probs=40.3
Q ss_pred CceEEEEec-CcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCc
Q 048078 49 KKPLVFLGS-PQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPAD 115 (378)
Q Consensus 49 ~~rIvf~Gs-~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~ 115 (378)
++||+++|+ |.++..+|+.|.+.. ..++++++.+..+- ..+.+.|+++++...
T Consensus 4 m~rI~ILGsTGSIG~~~l~vi~~~p----~~~~v~al~ag~ni----------~~l~~~~~~f~~~~v 57 (388)
T 1r0k_A 4 PRTVTVLGATGSIGHSTLDLIERNL----DRYQVIALTANRNV----------KDLADAAKRTNAKRA 57 (388)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTG----GGEEEEEEEESSCH----------HHHHHHHHHTTCSEE
T ss_pred ceEEEEECCCeEeHHHHHHHHHhCc----CcEEEEEEEcCCCH----------HHHHHHHHHcCCcEE
Confidence 479999999 999999999887752 13888888665432 346788899998854
No 77
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=80.20 E-value=2.4 Score=39.75 Aligned_cols=36 Identities=31% Similarity=0.394 Sum_probs=28.6
Q ss_pred CCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcC
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQ 87 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~ 87 (378)
.+++||+++|.+.++...++.|.+. .++++++|+..
T Consensus 7 M~~irv~IIG~G~iG~~~~~~l~~~-----~~~elvav~d~ 42 (304)
T 3bio_A 7 DKKIRAAIVGYGNIGRYALQALREA-----PDFEIAGIVRR 42 (304)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHC-----TTEEEEEEECC
T ss_pred CCCCEEEEECChHHHHHHHHHHhcC-----CCCEEEEEEcC
Confidence 3579999999999988888888764 36899988743
No 78
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=79.93 E-value=9.3 Score=36.13 Aligned_cols=101 Identities=20% Similarity=0.261 Sum_probs=60.3
Q ss_pred CCceEEEEecC--cchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHH----HHHHHHCCCCCceecCCC
Q 048078 48 RKKPLVFLGSP--QVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPV----AQYALDRGFPADLIFTPE 121 (378)
Q Consensus 48 ~~~rIvf~Gs~--~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v----~~~A~~~gIp~~~v~~~~ 121 (378)
+.+||+++|-. ..+.+.+..+-. .++++. ++.|+.- .+ +..+ ++.|++.|..+. +. .
T Consensus 147 ~gl~va~vGD~~~rva~Sl~~~~~~------~g~~v~--~~~P~~~-----~~-~~~~~~~~~~~a~~~G~~~~-~~--~ 209 (307)
T 2i6u_A 147 RGLRLSYFGDGANNMAHSLLLGGVT------AGIHVT--VAAPEGF-----LP-DPSVRAAAERRAQDTGASVT-VT--A 209 (307)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHHH------TTCEEE--EECCTTS-----CC-CHHHHHHHHHHHHHHTCCEE-EE--S
T ss_pred CCeEEEEECCCCcCcHHHHHHHHHH------CCCEEE--EECCccc-----cC-CHHHHHHHHHHHHHcCCeEE-EE--E
Confidence 46899999986 344444444433 256654 3334321 11 1224 345568897733 22 1
Q ss_pred CCCcHHHHHHHHhcCCcEEEEecC-----------------CCcCChhhhcCCCCceEEEccCCCCCCCC
Q 048078 122 RAGEDAFLSNLRALQPELCITAAY-----------------GNILPSKFLNIPPMGTVNIHPSLLPLYRG 174 (378)
Q Consensus 122 ~~~~~~~~~~l~~~~~Dliv~~~~-----------------~~ilp~~il~~~~~g~iNiHpSlLP~yRG 174 (378)
+ +.+.+ .++|++.+-.| .+.|.+++++..+-.++-+|| ||.+||
T Consensus 210 d-----~~eav--~~aDvvy~~~w~smg~~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mH~--lP~~Rg 270 (307)
T 2i6u_A 210 D-----AHAAA--AGADVLVTDTWTSMGQENDGLDRVKPFRPFQLNSRLLALADSDAIVLHC--LPAHRG 270 (307)
T ss_dssp C-----HHHHH--TTCSEEEECCSSCTTCTTSCCCSSGGGGGGCBCHHHHHHSCTTCEEEEC--SCCCBT
T ss_pred C-----HHHHh--cCCCEEEecceecCCcccchHHHHHHHhhcCCCHHHHhhcCCCcEEECC--CCCCCC
Confidence 1 12333 46899988666 355677777777778999996 688887
No 79
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=79.00 E-value=2.8 Score=37.11 Aligned_cols=68 Identities=12% Similarity=0.106 Sum_probs=45.7
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHHH
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAF 128 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~~ 128 (378)
.|||+|+|.+.++....+.|.+. +++|..++. ++. ..+.++++++|+. ... .+.+
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~------g~~V~~v~~-r~~----------~~~~~l~~~~g~~---~~~----~~~~- 77 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAA------QIPAIIANS-RGP----------ASLSSVTDRFGAS---VKA----VELK- 77 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHT------TCCEEEECT-TCG----------GGGHHHHHHHTTT---EEE----CCHH-
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCEEEEEEC-CCH----------HHHHHHHHHhCCC---ccc----ChHH-
Confidence 57999999999999998988875 567765443 332 1356778888877 321 1122
Q ss_pred HHHHHhcCCcEEEEecC
Q 048078 129 LSNLRALQPELCITAAY 145 (378)
Q Consensus 129 ~~~l~~~~~Dliv~~~~ 145 (378)
.+ .++|++|++--
T Consensus 78 --~~--~~aDvVilavp 90 (220)
T 4huj_A 78 --DA--LQADVVILAVP 90 (220)
T ss_dssp --HH--TTSSEEEEESC
T ss_pred --HH--hcCCEEEEeCC
Confidence 22 46899998764
No 80
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=78.66 E-value=4 Score=38.29 Aligned_cols=35 Identities=11% Similarity=0.034 Sum_probs=27.3
Q ss_pred CCceEEEEec-CcchHHHHHHHHHccCCCCCCceEEEEEcCC
Q 048078 48 RKKPLVFLGS-PQVSVNVLDALFNASSSPDSIFEVAAIVTQP 88 (378)
Q Consensus 48 ~~~rIvf~Gs-~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~ 88 (378)
+++||+++|. +.++...+++|.+. +.++++|+...
T Consensus 2 ~mirvgiIG~gG~i~~~h~~~l~~~------~~~lvav~d~~ 37 (312)
T 3o9z_A 2 HMTRFALTGLAGYIAPRHLKAIKEV------GGVLVASLDPA 37 (312)
T ss_dssp -CCEEEEECTTSSSHHHHHHHHHHT------TCEEEEEECSS
T ss_pred CceEEEEECCChHHHHHHHHHHHhC------CCEEEEEEcCC
Confidence 4789999999 67888888888763 57899887543
No 81
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=78.29 E-value=10 Score=35.99 Aligned_cols=102 Identities=17% Similarity=0.208 Sum_probs=60.1
Q ss_pred CCceEEEEecCc-chHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHH----HHHHHHCCCCCceecCCCC
Q 048078 48 RKKPLVFLGSPQ-VSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPV----AQYALDRGFPADLIFTPER 122 (378)
Q Consensus 48 ~~~rIvf~Gs~~-~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v----~~~A~~~gIp~~~v~~~~~ 122 (378)
..+||+++|-.. .+.+.+..+.. .++++. ++.|+.- .+ +..+ .+.|++.|..+. +. .+
T Consensus 154 ~gl~va~vGD~~rva~Sl~~~~~~------~g~~v~--~~~P~~~-----~~-~~~~~~~~~~~a~~~g~~~~-~~--~d 216 (315)
T 1pvv_A 154 KGVKVVYVGDGNNVAHSLMIAGTK------LGADVV--VATPEGY-----EP-DEKVIKWAEQNAAESGGSFE-LL--HD 216 (315)
T ss_dssp TTCEEEEESCCCHHHHHHHHHHHH------TTCEEE--EECCTTC-----CC-CHHHHHHHHHHHHHHTCEEE-EE--SC
T ss_pred CCcEEEEECCCcchHHHHHHHHHH------CCCEEE--EECCccc-----cC-CHHHHHHHHHHHHHcCCeEE-EE--eC
Confidence 468999999853 33334444333 256653 3334321 11 1224 345558887632 22 11
Q ss_pred CCcHHHHHHHHhcCCcEEEEecC-----------------CCcCChhhhcCCCCceEEEccCCCCCCCCc
Q 048078 123 AGEDAFLSNLRALQPELCITAAY-----------------GNILPSKFLNIPPMGTVNIHPSLLPLYRGA 175 (378)
Q Consensus 123 ~~~~~~~~~l~~~~~Dliv~~~~-----------------~~ilp~~il~~~~~g~iNiHpSlLP~yRG~ 175 (378)
+.+.+ .++|++.+-.| .+.|..++++..+-.++-+|| ||.+||.
T Consensus 217 -----~~eav--~~aDvvy~~~w~smg~~~~~~~~~~~~~~y~v~~ell~~a~~~ai~mH~--lP~~Rg~ 277 (315)
T 1pvv_A 217 -----PVKAV--KDADVIYTDVWASMGQEAEAEERRKIFRPFQVNKDLVKHAKPDYMFMHC--LPAHRGE 277 (315)
T ss_dssp -----HHHHT--TTCSEEEECCCCCSSTTSSSSHHHHHHGGGCBCHHHHHTSCTTCEEEEC--SCCCBTT
T ss_pred -----HHHHh--CCCCEEEEcceeccCcccchHHHHHHHHhcCCCHHHHhhcCCCcEEECC--CCCCCCC
Confidence 12333 46899888666 356778888877778999996 6888873
No 82
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=78.10 E-value=1.3 Score=42.34 Aligned_cols=36 Identities=11% Similarity=-0.055 Sum_probs=27.1
Q ss_pred CCceEEEEecCcchHH-HHHHHHHccCCCCCCceEEEEEcCC
Q 048078 48 RKKPLVFLGSPQVSVN-VLDALFNASSSPDSIFEVAAIVTQP 88 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~-~L~~L~~~~~~~~~~~ei~~Vvt~~ 88 (378)
+++||+++|.+.++.. .+..|.+. .++++++|+...
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~ 40 (362)
T 3fhl_A 4 EIIKTGLAAFGMSGQVFHAPFISTN-----PHFELYKIVERS 40 (362)
T ss_dssp CCEEEEESCCSHHHHHTTHHHHHHC-----TTEEEEEEECSS
T ss_pred CceEEEEECCCHHHHHHHHHHHhhC-----CCeEEEEEEcCC
Confidence 5799999999987765 56666553 368999988643
No 83
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=78.00 E-value=2.6 Score=40.13 Aligned_cols=35 Identities=17% Similarity=0.169 Sum_probs=26.6
Q ss_pred CCceEEEEecCcchHH-HHHHHHHccCCCCCCceEEEEEcC
Q 048078 48 RKKPLVFLGSPQVSVN-VLDALFNASSSPDSIFEVAAIVTQ 87 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~-~L~~L~~~~~~~~~~~ei~~Vvt~ 87 (378)
+++||+++|.+.++.. .+..|.+. .++++++|+..
T Consensus 6 ~~~rvgiiG~G~~g~~~~~~~~~~~-----~~~~l~av~d~ 41 (352)
T 3kux_A 6 DKIKVGLLGYGYASKTFHAPLIMGT-----PGLELAGVSSS 41 (352)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTS-----TTEEEEEEECS
T ss_pred CCceEEEECCCHHHHHHHHHHHhhC-----CCcEEEEEECC
Confidence 4799999999988776 66666543 36899988754
No 84
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=77.82 E-value=2.4 Score=40.51 Aligned_cols=68 Identities=13% Similarity=0.027 Sum_probs=43.0
Q ss_pred CCceEEEEecCcchHH-HHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHC-CCCCceecCCCCCCc
Q 048078 48 RKKPLVFLGSPQVSVN-VLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDR-GFPADLIFTPERAGE 125 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~-~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~-gIp~~~v~~~~~~~~ 125 (378)
+++||+++|.+.++.. .+..|.+. .++++++|+...+ ...++++ +++ ++. +
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~~--------------~~~~~~~~~~~---~~~--~--- 56 (358)
T 3gdo_A 4 DTIKVGILGYGLSGSVFHGPLLDVL-----DEYQISKIMTSRT--------------EEVKRDFPDAE---VVH--E--- 56 (358)
T ss_dssp TCEEEEEECCSHHHHHTTHHHHTTC-----TTEEEEEEECSCH--------------HHHHHHCTTSE---EES--S---
T ss_pred CcceEEEEccCHHHHHHHHHHHhhC-----CCeEEEEEEcCCH--------------HHHHhhCCCCc---eEC--C---
Confidence 4799999999987776 45555432 3689988875322 2355666 343 332 1
Q ss_pred HHHHHHHHhcCCcEEEEec
Q 048078 126 DAFLSNLRALQPELCITAA 144 (378)
Q Consensus 126 ~~~~~~l~~~~~Dliv~~~ 144 (378)
+.+.|.+.++|+++++.
T Consensus 57 --~~~ll~~~~vD~V~i~t 73 (358)
T 3gdo_A 57 --LEEITNDPAIELVIVTT 73 (358)
T ss_dssp --THHHHTCTTCCEEEECS
T ss_pred --HHHHhcCCCCCEEEEcC
Confidence 22445566789888765
No 85
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=77.42 E-value=3.7 Score=39.29 Aligned_cols=36 Identities=8% Similarity=0.109 Sum_probs=25.5
Q ss_pred CCCceEEEEecCcchHH-HHHHHHHccCCCCCCceEEEEEcC
Q 048078 47 SRKKPLVFLGSPQVSVN-VLDALFNASSSPDSIFEVAAIVTQ 87 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~-~L~~L~~~~~~~~~~~ei~~Vvt~ 87 (378)
++++||+++|.+.++.. .+..|.+. .++++++|+..
T Consensus 5 ~~~~rvgiiG~G~~g~~~~~~~l~~~-----~~~~l~av~d~ 41 (364)
T 3e82_A 5 NNTINIALIGYGFVGKTFHAPLIRSV-----PGLNLAFVASR 41 (364)
T ss_dssp --CEEEEEECCSHHHHHTHHHHHHTS-----TTEEEEEEECS
T ss_pred CCcceEEEECCCHHHHHHHHHHHhhC-----CCeEEEEEEcC
Confidence 35799999999988776 55555443 36899888754
No 86
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=76.57 E-value=16 Score=35.05 Aligned_cols=102 Identities=15% Similarity=0.161 Sum_probs=58.5
Q ss_pred CCCceEEEEecCc-chHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHH----HHHHHHCCCCCceecCCC
Q 048078 47 SRKKPLVFLGSPQ-VSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPV----AQYALDRGFPADLIFTPE 121 (378)
Q Consensus 47 ~~~~rIvf~Gs~~-~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v----~~~A~~~gIp~~~v~~~~ 121 (378)
-..+||+|+|-.. .+.+.+..+-. .++++. +++ |+.- . .+..+ +++|++.|..+. +. .
T Consensus 177 l~glkva~vGD~~nva~Sl~~~~~~------~G~~v~-~~~-P~~~-----~-~~~~~~~~~~~~a~~~G~~v~-~~--~ 239 (340)
T 4ep1_A 177 FKGIKLAYVGDGNNVCHSLLLASAK------VGMHMT-VAT-PVGY-----R-PNEEIVKKALAIAKETGAEIE-IL--H 239 (340)
T ss_dssp CTTCEEEEESCCCHHHHHHHHHHHH------HTCEEE-EEC-CTTC-----C-CCHHHHHHHHHHHHHHCCCEE-EE--S
T ss_pred CCCCEEEEECCCchhHHHHHHHHHH------cCCEEE-EEC-Cccc-----C-CCHHHHHHHHHHHHHcCCeEE-EE--C
Confidence 4578999999763 22223333322 256643 333 3321 1 11223 345568887733 21 1
Q ss_pred CCCcHHHHHHHHhcCCcEEEEecCC----------------CcCChhhhcCCCCceEEEccCCCCCCCC
Q 048078 122 RAGEDAFLSNLRALQPELCITAAYG----------------NILPSKFLNIPPMGTVNIHPSLLPLYRG 174 (378)
Q Consensus 122 ~~~~~~~~~~l~~~~~Dliv~~~~~----------------~ilp~~il~~~~~g~iNiHpSlLP~yRG 174 (378)
+ +.+.+ .++|++.+-.|. +.|.+++++..+-.++-+|| ||.+||
T Consensus 240 d-----~~eav--~~aDVvyt~~w~smg~e~~~~~~~~~~~y~vt~ell~~ak~dai~MHc--LPa~Rg 299 (340)
T 4ep1_A 240 N-----PELAV--NEADFIYTDVWMSMGQEGEEEKYTLFQPYQINKELVKHAKQTYHFLHC--LPAHRE 299 (340)
T ss_dssp C-----HHHHH--TTCSEEEECCC------CHHHHHHHHGGGCBCHHHHTTSCTTCEEEEC--SCCCBT
T ss_pred C-----HHHHh--CCCCEEEecCccCCCCCchHHHHHHhccccCCHHHHHhcCCCcEEECC--CCCCCC
Confidence 1 12333 468888877662 46788888887778999998 588887
No 87
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=76.03 E-value=8.5 Score=35.00 Aligned_cols=89 Identities=18% Similarity=0.092 Sum_probs=47.9
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCC--CCccCChHHHHHHHHCCCCCceecCCCC--CC
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDR--GRKVLPSPVAQYALDRGFPADLIFTPER--AG 124 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~gr--g~~~~~~~v~~~A~~~gIp~~~v~~~~~--~~ 124 (378)
.||++++-|+- ....-++....+ .+++|+++++.-+....+ -.......+...|+..|||+..+.-+.. ..
T Consensus 4 ~MKvvvl~SGG--kDSs~al~~l~~---~G~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIpl~~v~~~g~~~~e 78 (237)
T 3rjz_A 4 LADVAVLYSGG--KDSNYALYWAIK---NRFSVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKGFTQGEKEKE 78 (237)
T ss_dssp CSEEEEECCSS--HHHHHHHHHHHH---TTCEEEEEEEEECC--------CCSSSHHHHHHHHHTCCEEEEEC------C
T ss_pred CCEEEEEecCc--HHHHHHHHHHHH---cCCeEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCCEEEEECCCCchHH
Confidence 48999988884 333322221111 268999886532221111 0112335688899999999664432221 12
Q ss_pred cHHHHHHHHhcCCcEEEE
Q 048078 125 EDAFLSNLRALQPELCIT 142 (378)
Q Consensus 125 ~~~~~~~l~~~~~Dliv~ 142 (378)
.+++.+.|++.+++.+++
T Consensus 79 ~e~l~~~l~~~~i~~vv~ 96 (237)
T 3rjz_A 79 VEDLKRVLSGLKIQGIVA 96 (237)
T ss_dssp HHHHHHHHTTSCCSEEEC
T ss_pred HHHHHHHHHhcCCcEEEE
Confidence 355667777777776653
No 88
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=75.53 E-value=3.2 Score=41.42 Aligned_cols=38 Identities=11% Similarity=0.258 Sum_probs=29.5
Q ss_pred CCCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCC
Q 048078 46 VSRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQP 88 (378)
Q Consensus 46 ~~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~ 88 (378)
..+++||+++|.+.++...++.+.+. .++++++|+...
T Consensus 20 ~~k~IRVGIIGaG~iG~~~~~~l~~~-----~~veLvAV~D~~ 57 (446)
T 3upl_A 20 TGKPIRIGLIGAGEMGTDIVTQVARM-----QGIEVGALSARR 57 (446)
T ss_dssp TTCCEEEEEECCSHHHHHHHHHHTTS-----SSEEEEEEECSS
T ss_pred cCCceEEEEECChHHHHHHHHHHhhC-----CCcEEEEEEeCC
Confidence 45689999999999888888776543 368999887543
No 89
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=75.37 E-value=7.2 Score=31.98 Aligned_cols=75 Identities=12% Similarity=0.154 Sum_probs=45.7
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHH--HCCCCCceecCCCCCCcH
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYAL--DRGFPADLIFTPERAGED 126 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~--~~gIp~~~v~~~~~~~~~ 126 (378)
+.+|+++|.+.++....+.|.+. +++|+.|-.+++. .+..+.. ..|+. +..- +..++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~------g~~V~vid~~~~~-----------~~~~~~~~~~~~~~---~i~g-d~~~~ 61 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQR------GQNVTVISNLPED-----------DIKQLEQRLGDNAD---VIPG-DSNDS 61 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT------TCCEEEEECCCHH-----------HHHHHHHHHCTTCE---EEES-CTTSH
T ss_pred CCcEEEECCCHHHHHHHHHHHHC------CCCEEEEECCChH-----------HHHHHHHhhcCCCe---EEEc-CCCCH
Confidence 56899999999999998988875 5777655432211 1223332 34666 4332 33455
Q ss_pred HHHHHHHhcCCcEEEEec
Q 048078 127 AFLSNLRALQPELCITAA 144 (378)
Q Consensus 127 ~~~~~l~~~~~Dliv~~~ 144 (378)
+.++...-.++|++|++.
T Consensus 62 ~~l~~a~i~~ad~vi~~~ 79 (153)
T 1id1_A 62 SVLKKAGIDRCRAILALS 79 (153)
T ss_dssp HHHHHHTTTTCSEEEECS
T ss_pred HHHHHcChhhCCEEEEec
Confidence 555544345788887764
No 90
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=75.17 E-value=2.7 Score=40.33 Aligned_cols=74 Identities=16% Similarity=0.165 Sum_probs=46.8
Q ss_pred CCCceEEEEe-cCcchHH-HH----HHHHHccCCCCCCceEE--------EEEcCCCCCCCCCCccCChHHHHHHHHCCC
Q 048078 47 SRKKPLVFLG-SPQVSVN-VL----DALFNASSSPDSIFEVA--------AIVTQPPSRRDRGRKVLPSPVAQYALDRGF 112 (378)
Q Consensus 47 ~~~~rIvf~G-s~~~a~~-~L----~~L~~~~~~~~~~~ei~--------~Vvt~~~~~~grg~~~~~~~v~~~A~~~gI 112 (378)
.+++||+++| .+.++.. .+ ++|.+.. .++++ ..|+.++. ....++|+++|+
T Consensus 4 ~~~irigiiG~~G~~g~~~h~~~~~~~~~~~~-----~~~l~~~~~~~~~~av~~~~~----------~~a~~~a~~~~~ 68 (383)
T 3oqb_A 4 TQRLGLIMNGVTGRMGLNQHLIRSIVAIRDQG-----GVRLKNGDRIMPDPILVGRSA----------EKVEALAKRFNI 68 (383)
T ss_dssp CEEEEEEEESTTSTHHHHTTTTTTHHHHHHHT-----SEECTTSCEEEEEEEEECSSS----------HHHHHHHHHTTC
T ss_pred CceeEEEEEeccchhhhhhhHHHHHHHHhhcC-----ceeecCCcccceeeEEEcCCH----------HHHHHHHHHhCC
Confidence 4589999999 9987776 66 7776542 12211 12444432 246789999999
Q ss_pred CCceecCCCCCCcHHHHHHHHhcCCcEEEEec
Q 048078 113 PADLIFTPERAGEDAFLSNLRALQPELCITAA 144 (378)
Q Consensus 113 p~~~v~~~~~~~~~~~~~~l~~~~~Dliv~~~ 144 (378)
+. ++. ++.+.|++.++|+++++.
T Consensus 69 ~~--~~~-------~~~~ll~~~~iD~V~i~t 91 (383)
T 3oqb_A 69 AR--WTT-------DLDAALADKNDTMFFDAA 91 (383)
T ss_dssp CC--EES-------CHHHHHHCSSCCEEEECS
T ss_pred Cc--ccC-------CHHHHhcCCCCCEEEECC
Confidence 72 221 233556677899988765
No 91
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=74.20 E-value=12 Score=35.71 Aligned_cols=102 Identities=16% Similarity=0.232 Sum_probs=60.7
Q ss_pred CCceEEEEecC--cchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHH----HHHHHHCCCCCceecCCC
Q 048078 48 RKKPLVFLGSP--QVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPV----AQYALDRGFPADLIFTPE 121 (378)
Q Consensus 48 ~~~rIvf~Gs~--~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v----~~~A~~~gIp~~~v~~~~ 121 (378)
+.+||+++|-. ..+-+.+..+.. .++++. ++.|+.- .+ +..+ ++.|++.|..+. +. .
T Consensus 166 ~gl~va~vGD~~~rva~Sl~~~~~~------~G~~v~--~~~P~~~-----~p-~~~~~~~~~~~a~~~G~~v~-~~--~ 228 (325)
T 1vlv_A 166 KGVKVVFMGDTRNNVATSLMIACAK------MGMNFV--ACGPEEL-----KP-RSDVFKRCQEIVKETDGSVS-FT--S 228 (325)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHHH------TTCEEE--EESCGGG-----CC-CHHHHHHHHHHHHHHCCEEE-EE--S
T ss_pred CCcEEEEECCCCcCcHHHHHHHHHH------CCCEEE--EECCccc-----cC-CHHHHHHHHHHHHHcCCeEE-EE--c
Confidence 46899999985 344444444433 256653 3333321 11 1224 345568887632 22 1
Q ss_pred CCCcHHHHHHHHhcCCcEEEEecC-----------------CCcCChhhhcCC-CCceEEEccCCCCCCCCc
Q 048078 122 RAGEDAFLSNLRALQPELCITAAY-----------------GNILPSKFLNIP-PMGTVNIHPSLLPLYRGA 175 (378)
Q Consensus 122 ~~~~~~~~~~l~~~~~Dliv~~~~-----------------~~ilp~~il~~~-~~g~iNiHpSlLP~yRG~ 175 (378)
+ +.+.+ .++|++.+-.| .+.|.+++++.. +-.++-+|| ||.+||.
T Consensus 229 d-----~~eav--~~aDvvyt~~w~smg~~~~~~~~~~~~~~y~v~~ell~~a~k~dai~mH~--LP~~Rg~ 291 (325)
T 1vlv_A 229 N-----LEEAL--AGADVVYTDVWASMGEEDKEKERMALLKPYQVNERVMEMTGKSETIFMHC--LPAVKGQ 291 (325)
T ss_dssp C-----HHHHH--TTCSEEEECCCC----------CHHHHGGGCBCHHHHHTTCCTTCEEEEC--SCCCBTT
T ss_pred C-----HHHHH--ccCCEEEeccccccccccchHhHHHHHhhcCCCHHHHHhccCCCeEEECC--CCCCCCc
Confidence 1 12333 46888888666 356778888877 778999996 7899873
No 92
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=74.20 E-value=9.8 Score=36.00 Aligned_cols=51 Identities=20% Similarity=0.068 Sum_probs=29.4
Q ss_pred CCCCCceEEEEecCcch-----HHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCc
Q 048078 45 SVSRKKPLVFLGSPQVS-----VNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPAD 115 (378)
Q Consensus 45 ~~~~~~rIvf~Gs~~~a-----~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~ 115 (378)
....+|||+|+..+..+ ....++|.+. +++|..+ |.++ ..+...+.|+++.
T Consensus 16 ~~~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~------GheV~v~-~~~~-------------~~~~~~~~g~~~~ 71 (412)
T 3otg_A 16 IEGRHMRVLFASLGTHGHTYPLLPLATAARAA------GHEVTFA-TGEG-------------FAGTLRKLGFEPV 71 (412)
T ss_dssp --CCSCEEEEECCSSHHHHGGGHHHHHHHHHT------TCEEEEE-ECGG-------------GHHHHHHTTCEEE
T ss_pred cccceeEEEEEcCCCcccHHHHHHHHHHHHHC------CCEEEEE-ccHH-------------HHHHHHhcCCcee
Confidence 45568999998866322 2344556553 6887655 4321 2456667788743
No 93
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=73.28 E-value=3.3 Score=37.32 Aligned_cols=72 Identities=13% Similarity=0.172 Sum_probs=43.7
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
.+|||+|+|.+.++......|.+. +++| .++ +++. ..+.++++++|+. +.. +.+
T Consensus 2 ~~m~i~iiG~G~mG~~~a~~l~~~------g~~v-~~~-~~~~----------~~~~~~~~~~g~~---~~~----~~~- 55 (259)
T 2ahr_A 2 NAMKIGIIGVGKMASAIIKGLKQT------PHEL-IIS-GSSL----------ERSKEIAEQLALP---YAM----SHQ- 55 (259)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTS------SCEE-EEE-CSSH----------HHHHHHHHHHTCC---BCS----SHH-
T ss_pred CccEEEEECCCHHHHHHHHHHHhC------CCeE-EEE-CCCH----------HHHHHHHHHcCCE---eeC----CHH-
Confidence 468999999999988888888654 3444 344 3321 2355666677876 321 112
Q ss_pred HHHHHHhcCCcEEEEecCCCcC
Q 048078 128 FLSNLRALQPELCITAAYGNIL 149 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~~~~il 149 (378)
+.++ ++|+++++--...+
T Consensus 56 --~~~~--~~D~Vi~~v~~~~~ 73 (259)
T 2ahr_A 56 --DLID--QVDLVILGIKPQLF 73 (259)
T ss_dssp --HHHH--TCSEEEECSCGGGH
T ss_pred --HHHh--cCCEEEEEeCcHhH
Confidence 2232 68988887654433
No 94
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=73.10 E-value=3.1 Score=38.63 Aligned_cols=41 Identities=15% Similarity=0.089 Sum_probs=24.7
Q ss_pred CCCCCCCCCCCCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEE
Q 048078 37 SSTTPSAFSVSRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAA 83 (378)
Q Consensus 37 ~~~~~~~~~~~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~ 83 (378)
+||++.+......+||+|+|.+.++......|.++ +++|.+
T Consensus 3 ~~~~~~~~~~~~~~~I~VIG~G~mG~~iA~~la~~------G~~V~~ 43 (302)
T 1f0y_A 3 SSTASASAKKIIVKHVTVIGGGLMGAGIAQVAAAT------GHTVVL 43 (302)
T ss_dssp ---------CCCCCEEEEECCSHHHHHHHHHHHHT------TCEEEE
T ss_pred ccccccccccccCCEEEEECCCHHHHHHHHHHHhC------CCeEEE
Confidence 44444444444456899999999988888888775 577653
No 95
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=72.23 E-value=6.2 Score=32.04 Aligned_cols=82 Identities=10% Similarity=0.111 Sum_probs=48.8
Q ss_pred CCCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHC--CCCCceecC--CC
Q 048078 46 VSRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDR--GFPADLIFT--PE 121 (378)
Q Consensus 46 ~~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~--gIp~~~v~~--~~ 121 (378)
...++||+++..+......|+.+++.. +++++..+.+.. .+.+...+. ..... +.. ..
T Consensus 33 ~~~~~~Ilivdd~~~~~~~l~~~L~~~-----g~~v~~~~~~~~------------~al~~l~~~~~~~dli-ilD~~l~ 94 (157)
T 3hzh_A 33 TGIPFNVLIVDDSVFTVKQLTQIFTSE-----GFNIIDTAADGE------------EAVIKYKNHYPNIDIV-TLXITMP 94 (157)
T ss_dssp TTEECEEEEECSCHHHHHHHHHHHHHT-----TCEEEEEESSHH------------HHHHHHHHHGGGCCEE-EECSSCS
T ss_pred CCCceEEEEEeCCHHHHHHHHHHHHhC-----CCeEEEEECCHH------------HHHHHHHhcCCCCCEE-EEeccCC
Confidence 345679999999887788888888752 677765554432 234455554 33322 222 22
Q ss_pred CCCcHHHHHHHHhcCCc--EEEEecC
Q 048078 122 RAGEDAFLSNLRALQPE--LCITAAY 145 (378)
Q Consensus 122 ~~~~~~~~~~l~~~~~D--liv~~~~ 145 (378)
..+.-++++.|++..++ ++++.++
T Consensus 95 ~~~g~~~~~~lr~~~~~~~ii~ls~~ 120 (157)
T 3hzh_A 95 KMDGITCLSNIMEFDKNARVIMISAL 120 (157)
T ss_dssp SSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred CccHHHHHHHHHhhCCCCcEEEEecc
Confidence 34456777888776544 4555444
No 96
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=71.42 E-value=3.5 Score=34.10 Aligned_cols=33 Identities=12% Similarity=0.178 Sum_probs=25.8
Q ss_pred CCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEE
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIV 85 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vv 85 (378)
...++|+++|.+.++....+.|.+. +++|+++-
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~------g~~V~vid 49 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSS------GHSVVVVD 49 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT------TCEEEEEE
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhC------CCeEEEEE
Confidence 4468999999999999888888764 56766553
No 97
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=71.40 E-value=1.7 Score=41.18 Aligned_cols=38 Identities=18% Similarity=0.221 Sum_probs=26.3
Q ss_pred CCceEEEEecCcchHH-HHHHHHHccCCCCCCceEEEEEcCCC
Q 048078 48 RKKPLVFLGSPQVSVN-VLDALFNASSSPDSIFEVAAIVTQPP 89 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~-~L~~L~~~~~~~~~~~ei~~Vvt~~~ 89 (378)
+++||+++|.+.++.. .+..++... .++++++|+...+
T Consensus 1 m~~rvgiiG~G~~g~~~~~~~~~~~~----~~~~l~av~d~~~ 39 (345)
T 3f4l_A 1 MVINCAFIGFGKSTTRYHLPYVLNRK----DSWHVAHIFRRHA 39 (345)
T ss_dssp -CEEEEEECCSHHHHHHTHHHHTTCT----TTEEEEEEECSSC
T ss_pred CceEEEEEecCHHHHHHHHHHHHhcC----CCeEEEEEEcCCH
Confidence 3689999999987765 455344432 3689999887543
No 98
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=71.16 E-value=13 Score=35.17 Aligned_cols=17 Identities=12% Similarity=0.342 Sum_probs=13.5
Q ss_pred HHHHHHHhcCCcEEEEe
Q 048078 127 AFLSNLRALQPELCITA 143 (378)
Q Consensus 127 ~~~~~l~~~~~Dliv~~ 143 (378)
.+.+.+++++||++++-
T Consensus 121 ~l~~~l~~~~pDlVv~d 137 (398)
T 3oti_A 121 GTMALVDDYRPDLVVYE 137 (398)
T ss_dssp HHHHHHHHHCCSEEEEE
T ss_pred HHHHHHHHcCCCEEEEC
Confidence 45677888999999874
No 99
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=71.12 E-value=7.2 Score=36.58 Aligned_cols=35 Identities=9% Similarity=0.082 Sum_probs=27.4
Q ss_pred CCceEEEEec-CcchHHHHHHHHHccCCCCCCceEEEEEcCC
Q 048078 48 RKKPLVFLGS-PQVSVNVLDALFNASSSPDSIFEVAAIVTQP 88 (378)
Q Consensus 48 ~~~rIvf~Gs-~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~ 88 (378)
+++||+++|. +.++...+++|.+. +.++++|+...
T Consensus 2 ~mirvgiIG~gG~i~~~h~~~l~~~------~~~lvav~d~~ 37 (318)
T 3oa2_A 2 HMKNFALIGAAGYIAPRHMRAIKDT------GNCLVSAYDIN 37 (318)
T ss_dssp -CCEEEEETTTSSSHHHHHHHHHHT------TCEEEEEECSS
T ss_pred CceEEEEECCCcHHHHHHHHHHHhC------CCEEEEEEcCC
Confidence 3789999999 67888888888763 57899887543
No 100
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=70.67 E-value=29 Score=33.00 Aligned_cols=102 Identities=19% Similarity=0.234 Sum_probs=57.4
Q ss_pred CCCceEEEEecCc-chHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHH----HHHHHCCCCCceecCCC
Q 048078 47 SRKKPLVFLGSPQ-VSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVA----QYALDRGFPADLIFTPE 121 (378)
Q Consensus 47 ~~~~rIvf~Gs~~-~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~----~~A~~~gIp~~~v~~~~ 121 (378)
-..+||+|+|-.. .+.+.+..+.. .++++. +++ |+.- . .+..+. +.|++.|..+. +. .
T Consensus 155 l~glkva~vGD~~rva~Sl~~~~~~------~G~~v~-~~~-P~~~-----~-~~~~~~~~~~~~a~~~g~~v~-~~--~ 217 (323)
T 3gd5_A 155 LAGLKLAYVGDGNNVAHSLLLGCAK------VGMSIA-VAT-PEGF-----T-PDPAVSARASEIAGRTGAEVQ-IL--R 217 (323)
T ss_dssp CTTCEEEEESCCCHHHHHHHHHHHH------HTCEEE-EEC-CTTC-----C-CCHHHHHHHHHHHHHHTCCEE-EE--S
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHH------cCCEEE-EEC-CCcc-----c-CCHHHHHHHHHHHHHcCCeEE-EE--C
Confidence 3578999999763 22223333322 256643 333 4321 1 122333 44556787733 21 1
Q ss_pred CCCcHHHHHHHHhcCCcEEEEecC-----------------CCcCChhhhcCCCCceEEEccCCCCCCCC
Q 048078 122 RAGEDAFLSNLRALQPELCITAAY-----------------GNILPSKFLNIPPMGTVNIHPSLLPLYRG 174 (378)
Q Consensus 122 ~~~~~~~~~~l~~~~~Dliv~~~~-----------------~~ilp~~il~~~~~g~iNiHpSlLP~yRG 174 (378)
+ +.+.+ .++|++.+-.| .+.|..++++..+-.++-+|| ||.+||
T Consensus 218 d-----~~eav--~~aDvvyt~~wqs~g~~~~~~~~~~~~~~y~vt~ell~~ak~dai~mHc--lPa~Rg 278 (323)
T 3gd5_A 218 D-----PFEAA--RGAHILYTDVWTSMGQEAETQHRLQLFEQYQINAALLNCAAAEAIVLHC--LPAHRG 278 (323)
T ss_dssp C-----HHHHH--TTCSEEEECCCC---------CCHHHHTTCCBCHHHHHTSCTTCEEEEC--SCCCBT
T ss_pred C-----HHHHh--cCCCEEEEeceecCCCcccchHHHHHhhccCCCHHHHhhcCCCcEEECC--CCCCCC
Confidence 1 12333 46888877665 245777888877778999998 478887
No 101
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=70.48 E-value=16 Score=31.36 Aligned_cols=68 Identities=13% Similarity=0.057 Sum_probs=23.1
Q ss_pred CccccCCcceee--ccccccccccceeeEeeecCCCCCCCCCCCCCCCCCceEEEEecCcchHHHHHHHHHc
Q 048078 2 NFFSLHSGLVED--EKTKEMNSSLMIRRFFCFKGPATSSTTPSAFSVSRKKPLVFLGSPQVSVNVLDALFNA 71 (378)
Q Consensus 2 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rIvf~Gs~~~a~~~L~~L~~~ 71 (378)
++-++|+|.|.= +.|+-++-++ .-=...+.+......+++.....++||+++-.+......|+.+++.
T Consensus 14 ~~~~~hgG~i~v~S~~g~Gs~f~~--~lP~~~~~~~~~~~~~~~~~~~~~~~ILiVdDd~~~~~~l~~~L~~ 83 (206)
T 3mm4_A 14 VPRGSHMASTDSESETRVKSVRTG--RKPIGNPEDEQETSKPSDDEFLRGKRVLVVDDNFISRKVATGKLKK 83 (206)
T ss_dssp CC-----------------------------------------CTTTTTTCEEEEECSCHHHHHHHHHHHHH
T ss_pred ccccccCCceeeeccCCCcceeee--ccCCCCCcccccccCCCcccccCCCEEEEEeCCHHHHHHHHHHHHH
Confidence 356788888765 4444443333 2111111111222222333445678999999888778888888875
No 102
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=70.33 E-value=12 Score=35.41 Aligned_cols=53 Identities=11% Similarity=0.074 Sum_probs=30.1
Q ss_pred CCCCCCCceEEEEecCcc-----hHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCc
Q 048078 43 AFSVSRKKPLVFLGSPQV-----SVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPAD 115 (378)
Q Consensus 43 ~~~~~~~~rIvf~Gs~~~-----a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~ 115 (378)
-.+...+|||+|+..+.. ..+..++|.+. +|+|..+. .+. ..+..++.|+++.
T Consensus 14 ~~~~~~m~rIl~~~~~~~GHv~p~l~La~~L~~~------Gh~V~v~~-~~~-------------~~~~~~~~G~~~~ 71 (415)
T 3rsc_A 14 HIEGRHMAHLLIVNVASHGLILPTLTVVTELVRR------GHRVSYVT-AGG-------------FAEPVRAAGATVV 71 (415)
T ss_dssp -----CCCEEEEECCSCHHHHGGGHHHHHHHHHT------TCEEEEEE-CGG-------------GHHHHHHTTCEEE
T ss_pred CcCcccCCEEEEEeCCCccccccHHHHHHHHHHC------CCEEEEEe-CHH-------------HHHHHHhcCCEEE
Confidence 345566789999876632 24455666664 68876554 322 2456677888744
No 103
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=70.29 E-value=5.8 Score=33.53 Aligned_cols=75 Identities=16% Similarity=0.149 Sum_probs=44.8
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
..++|+++|.+.++..+.+.|.+.. +++|+++-.+++ -.+.+.+.|+. +..- +..+.+
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~~~-----g~~V~vid~~~~-------------~~~~~~~~g~~---~~~g-d~~~~~ 95 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRARY-----GKISLGIEIREE-------------AAQQHRSEGRN---VISG-DATDPD 95 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHHHH-----CSCEEEEESCHH-------------HHHHHHHTTCC---EEEC-CTTCHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcc-----CCeEEEEECCHH-------------HHHHHHHCCCC---EEEc-CCCCHH
Confidence 3678999999999999999887640 366654432221 23445677887 3322 233444
Q ss_pred HHHHH-HhcCCcEEEEec
Q 048078 128 FLSNL-RALQPELCITAA 144 (378)
Q Consensus 128 ~~~~l-~~~~~Dliv~~~ 144 (378)
.++.+ .-.++|++|++.
T Consensus 96 ~l~~~~~~~~ad~vi~~~ 113 (183)
T 3c85_A 96 FWERILDTGHVKLVLLAM 113 (183)
T ss_dssp HHHTBCSCCCCCEEEECC
T ss_pred HHHhccCCCCCCEEEEeC
Confidence 44332 223688888754
No 104
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=69.63 E-value=4.4 Score=37.71 Aligned_cols=86 Identities=8% Similarity=0.079 Sum_probs=43.9
Q ss_pred CCCCceEEEEec-CcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCC
Q 048078 46 VSRKKPLVFLGS-PQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAG 124 (378)
Q Consensus 46 ~~~~~rIvf~Gs-~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~ 124 (378)
....|||++.|. +.++..+++.|++.. ..++|+++--.+.... . ..+.......++. +...+-.+
T Consensus 21 ~~~~~~vlVtGatG~iG~~l~~~L~~~g----~~~~v~~~~~~~~~~~--~-----~~l~~~~~~~~~~---~~~~Dl~d 86 (346)
T 4egb_A 21 QSNAMNILVTGGAGFIGSNFVHYMLQSY----ETYKIINFDALTYSGN--L-----NNVKSIQDHPNYY---FVKGEIQN 86 (346)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHHHC----TTEEEEEEECCCTTCC--G-----GGGTTTTTCTTEE---EEECCTTC
T ss_pred ccCCCeEEEECCccHHHHHHHHHHHhhC----CCcEEEEEeccccccc--h-----hhhhhhccCCCeE---EEEcCCCC
Confidence 345689999996 556667778888762 1256554432221110 0 0111111112333 33333223
Q ss_pred cHHHHHHHHhcCCcEEEEecC
Q 048078 125 EDAFLSNLRALQPELCITAAY 145 (378)
Q Consensus 125 ~~~~~~~l~~~~~Dliv~~~~ 145 (378)
.+.+.+.++..++|++|-++.
T Consensus 87 ~~~~~~~~~~~~~d~Vih~A~ 107 (346)
T 4egb_A 87 GELLEHVIKERDVQVIVNFAA 107 (346)
T ss_dssp HHHHHHHHHHHTCCEEEECCC
T ss_pred HHHHHHHHhhcCCCEEEECCc
Confidence 344556667778999987764
No 105
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=68.90 E-value=15 Score=34.77 Aligned_cols=49 Identities=22% Similarity=0.192 Sum_probs=36.0
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCC
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFP 113 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp 113 (378)
++||+++|.+..+...++.|.+. ..+++++|....+. ....+++..|++
T Consensus 2 ~irVgIiG~G~iG~~~~r~l~~~-----~~~elvav~d~~~~-----------~~~~~~~~~g~~ 50 (334)
T 2czc_A 2 KVKVGVNGYGTIGKRVAYAVTKQ-----DDMELIGITKTKPD-----------FEAYRAKELGIP 50 (334)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTC-----TTEEEEEEEESSCS-----------HHHHHHHHTTCC
T ss_pred CcEEEEEeEhHHHHHHHHHHhcC-----CCCEEEEEEcCCHH-----------HHHHHHHhcCcc
Confidence 57999999998888888888654 36899888753221 356677777776
No 106
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=68.72 E-value=24 Score=32.34 Aligned_cols=82 Identities=13% Similarity=0.100 Sum_probs=45.7
Q ss_pred CCceEEEEec-CcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCc-
Q 048078 48 RKKPLVFLGS-PQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGE- 125 (378)
Q Consensus 48 ~~~rIvf~Gs-~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~- 125 (378)
.+++|++.|. +-++..+.+.|++. +++|+++.-.+... ...+.++....+-... +... ++.+
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~------G~~V~~~~r~~~~~--------~~~~~~~~~~~~~~~~-~~~~-Dl~d~ 67 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAH------GYDVVIADNLVNSK--------REAIARIEKITGKTPA-FHET-DVSDE 67 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHT------TCEEEEECCCSSSC--------THHHHHHHHHHSCCCE-EECC-CTTCH
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHC------CCcEEEEecCCcch--------HHHHHHHHhhcCCCce-EEEe-ecCCH
Confidence 3679999994 55666677888875 57776654322211 1122333332232322 3333 3444
Q ss_pred HHHHHHHHhcCCcEEEEecC
Q 048078 126 DAFLSNLRALQPELCITAAY 145 (378)
Q Consensus 126 ~~~~~~l~~~~~Dliv~~~~ 145 (378)
+.+.+.++..++|++|-.+-
T Consensus 68 ~~~~~~~~~~~~d~vih~A~ 87 (341)
T 3enk_A 68 RALARIFDAHPITAAIHFAA 87 (341)
T ss_dssp HHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHhccCCcEEEECcc
Confidence 44556666668999987664
No 107
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=68.30 E-value=8.7 Score=35.39 Aligned_cols=84 Identities=12% Similarity=0.099 Sum_probs=43.4
Q ss_pred CCCCCceEEEEecC-cchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCC
Q 048078 45 SVSRKKPLVFLGSP-QVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERA 123 (378)
Q Consensus 45 ~~~~~~rIvf~Gs~-~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~ 123 (378)
+.+..+||++.|.. .++..+.+.|++. +++|+++.-.++.. ....+..+....++. +.. .++
T Consensus 10 ~~~~~~~vlVTGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~-------~~~~~~~~~~~~~~~---~~~-~Dl 72 (335)
T 1rpn_A 10 HGSMTRSALVTGITGQDGAYLAKLLLEK------GYRVHGLVARRSSD-------TRWRLRELGIEGDIQ---YED-GDM 72 (335)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEECCCSSC-------CCHHHHHTTCGGGEE---EEE-CCT
T ss_pred ccccCCeEEEECCCChHHHHHHHHHHHC------CCeEEEEeCCCccc-------cccchhhccccCceE---EEE-CCC
Confidence 34558999999964 4556666788874 57877665433221 011121111112333 232 234
Q ss_pred Cc-HHHHHHHHhcCCcEEEEecC
Q 048078 124 GE-DAFLSNLRALQPELCITAAY 145 (378)
Q Consensus 124 ~~-~~~~~~l~~~~~Dliv~~~~ 145 (378)
.+ +.+.+.++..++|++|-++.
T Consensus 73 ~d~~~~~~~~~~~~~d~Vih~A~ 95 (335)
T 1rpn_A 73 ADACSVQRAVIKAQPQEVYNLAA 95 (335)
T ss_dssp TCHHHHHHHHHHHCCSEEEECCS
T ss_pred CCHHHHHHHHHHcCCCEEEECcc
Confidence 34 44556666668999987664
No 108
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=67.56 E-value=15 Score=34.72 Aligned_cols=51 Identities=16% Similarity=0.067 Sum_probs=29.6
Q ss_pred CCCCceEEEEecCc-----chHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCce
Q 048078 46 VSRKKPLVFLGSPQ-----VSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADL 116 (378)
Q Consensus 46 ~~~~~rIvf~Gs~~-----~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~ 116 (378)
...+|||+|+..+. ...+..++|.+. +|+|..+ |.+. ..+..++.|+++..
T Consensus 12 ~~~~MrIl~~~~~~~gh~~~~~~La~~L~~~------GheV~v~-~~~~-------------~~~~~~~~G~~~~~ 67 (398)
T 4fzr_A 12 RGSHMRILVIAGCSEGFVMPLVPLSWALRAA------GHEVLVA-ASEN-------------MGPTVTGAGLPFAP 67 (398)
T ss_dssp ---CCEEEEECCSSHHHHGGGHHHHHHHHHT------TCEEEEE-EEGG-------------GHHHHHHTTCCEEE
T ss_pred CCCceEEEEEcCCCcchHHHHHHHHHHHHHC------CCEEEEE-cCHH-------------HHHHHHhCCCeeEe
Confidence 44579999986552 123455666654 6887644 4322 35667778888543
No 109
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=67.38 E-value=4.4 Score=39.10 Aligned_cols=37 Identities=19% Similarity=0.297 Sum_probs=28.1
Q ss_pred CCCCceEEEEe-cCcchHHHHHHHHHccCCCCCCceEEEEEcC
Q 048078 46 VSRKKPLVFLG-SPQVSVNVLDALFNASSSPDSIFEVAAIVTQ 87 (378)
Q Consensus 46 ~~~~~rIvf~G-s~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~ 87 (378)
...++||++.| ++..+...++.|.+. ..++++++...
T Consensus 13 ~M~~~kV~IiGAtG~iG~~llr~L~~~-----p~~elvai~~~ 50 (359)
T 1xyg_A 13 PEKDIRIGLLGASGYTGAEIVRLLANH-----PHFQVTLMTAD 50 (359)
T ss_dssp --CCEEEEEECCSSHHHHHHHHHHHTC-----SSEEEEEEBCS
T ss_pred cccCcEEEEECcCCHHHHHHHHHHHcC-----CCcEEEEEeCc
Confidence 34568999999 898888888888764 35788887764
No 110
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=67.17 E-value=8.1 Score=35.65 Aligned_cols=34 Identities=15% Similarity=0.109 Sum_probs=24.4
Q ss_pred CCceEEEEec-CcchHHHHHHHHHccCCCCCCceEEEEEcC
Q 048078 48 RKKPLVFLGS-PQVSVNVLDALFNASSSPDSIFEVAAIVTQ 87 (378)
Q Consensus 48 ~~~rIvf~Gs-~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~ 87 (378)
..|||++.|. +.++..+.+.|++. +++|+++.-.
T Consensus 12 ~~M~ilVtGatG~iG~~l~~~L~~~------g~~V~~~~r~ 46 (342)
T 2x4g_A 12 AHVKYAVLGATGLLGHHAARAIRAA------GHDLVLIHRP 46 (342)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHT------TCEEEEEECT
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHC------CCEEEEEecC
Confidence 3579999994 65666677888874 5788766543
No 111
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=66.53 E-value=2.6 Score=42.91 Aligned_cols=121 Identities=18% Similarity=0.237 Sum_probs=71.9
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHH--CCCCCceecCCCCCCcH
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALD--RGFPADLIFTPERAGED 126 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~--~gIp~~~v~~~~~~~~~ 126 (378)
..||+++|.+.......+.|.+. +++++.++|...... ....+.+...+ .|.... |.. ..+..
T Consensus 364 GKrvaI~gd~~~~~~la~fL~el------Gm~vv~v~~~~~~~~------~~~~~~~~l~~~~~~~~~~-v~~--~~D~~ 428 (523)
T 3u7q_B 364 GKRFALWGDPDFVMGLVKFLLEL------GCEPVHILCHNGNKR------WKKAVDAILAASPYGKNAT-VYI--GKDLW 428 (523)
T ss_dssp TCEEEEECSHHHHHHHHHHHHHT------TCEEEEEEETTCCHH------HHHHHHHHHHTSGGGTTCE-EEE--SCCHH
T ss_pred CCEEEEECCchHHHHHHHHHHHc------CCEEEEEEeCCCCHH------HHHHHHHHHhhccCCCCcE-EEE--CCCHH
Confidence 46999999777777777777763 799999988643210 11124444443 222222 221 22456
Q ss_pred HHHHHHHhcCCcEEEEecCCCcCChhhh---cCCCCceEE----------EccCCCCCCCCchHHHHHHHc
Q 048078 127 AFLSNLRALQPELCITAAYGNILPSKFL---NIPPMGTVN----------IHPSLLPLYRGAAPVQRALQG 184 (378)
Q Consensus 127 ~~~~~l~~~~~Dliv~~~~~~ilp~~il---~~~~~g~iN----------iHpSlLP~yRG~~pi~wai~~ 184 (378)
++.+.+++.+||++|.-++++.+-.+.+ ..+...++. .|....=.|+|+.-+...|.|
T Consensus 429 ~l~~~i~~~~pDLlig~s~~k~~a~~~~~~~~~~giP~irigfPi~dr~~~~~~p~~GY~G~~~l~~~i~n 499 (523)
T 3u7q_B 429 HLRSLVFTDKPDFMIGNSYGKFIQRDTLHKGKEFEVPLIRIGFPIFDRHHLHRSTTLGYEGAMQILTTLVN 499 (523)
T ss_dssp HHHHHHHHTCCSEEEECTTHHHHHHHHHHHCGGGCCCEEECSSCCCSSSSGGGCCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEECccHHHHHHHhhcccccCCCceEEecCCeeeeecCCCCceeeHhHHHHHHHHHHH
Confidence 7778899999999999998877766552 111112222 233334458887666655554
No 112
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=66.21 E-value=26 Score=31.93 Aligned_cols=76 Identities=11% Similarity=0.204 Sum_probs=44.2
Q ss_pred CceEEEEe-cCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcH-
Q 048078 49 KKPLVFLG-SPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGED- 126 (378)
Q Consensus 49 ~~rIvf~G-s~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~- 126 (378)
+.+|+++| ++.++..+.+.|++. +++|.++.-+++.. ...+.++ ...|+. +... ++.+.
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~~------g~~V~~l~R~~~~~--------~~~~~~l-~~~~v~---~v~~-Dl~d~~ 71 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLKL------GHPTYVFTRPNSSK--------TTLLDEF-QSLGAI---IVKG-ELDEHE 71 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHT------TCCEEEEECTTCSC--------HHHHHHH-HHTTCE---EEEC-CTTCHH
T ss_pred CCeEEEECCCchHHHHHHHHHHHC------CCcEEEEECCCCch--------hhHHHHh-hcCCCE---EEEe-cCCCHH
Confidence 34899999 678888888999985 57776554332211 0112222 346766 4333 34443
Q ss_pred HHHHHHHhcCCcEEEEecC
Q 048078 127 AFLSNLRALQPELCITAAY 145 (378)
Q Consensus 127 ~~~~~l~~~~~Dliv~~~~ 145 (378)
.+.+.++ ++|.+|.+.-
T Consensus 72 ~l~~a~~--~~d~vi~~a~ 88 (318)
T 2r6j_A 72 KLVELMK--KVDVVISALA 88 (318)
T ss_dssp HHHHHHT--TCSEEEECCC
T ss_pred HHHHHHc--CCCEEEECCc
Confidence 4445553 5898887653
No 113
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=65.99 E-value=21 Score=27.63 Aligned_cols=90 Identities=7% Similarity=0.050 Sum_probs=49.0
Q ss_pred CCCCCCCCCCCCCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCc
Q 048078 36 TSSTTPSAFSVSRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPAD 115 (378)
Q Consensus 36 ~~~~~~~~~~~~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~ 115 (378)
++++.+.+......+||+++..+......|+.+++.. ++++. .+.+.. .+.+...+.....
T Consensus 5 ~~~~~~~~~~~~~~~~ilivdd~~~~~~~l~~~L~~~-----g~~v~-~~~~~~------------~al~~l~~~~~dl- 65 (137)
T 2pln_A 5 HHHHHHGSLVPRGSMRVLLIEKNSVLGGEIEKGLNVK-----GFMAD-VTESLE------------DGEYLMDIRNYDL- 65 (137)
T ss_dssp ----------CTTCSEEEEECSCHHHHHHHHHHHHHT-----TCEEE-EESCHH------------HHHHHHHHSCCSE-
T ss_pred ccccccCcccCCCCCeEEEEeCCHHHHHHHHHHHHHc-----CcEEE-EeCCHH------------HHHHHHHcCCCCE-
Confidence 4445555555677889999999877777888877752 56654 333221 3455555654442
Q ss_pred eecCCCCCCcHHHHHHHHhc--CCcEEEEecCC
Q 048078 116 LIFTPERAGEDAFLSNLRAL--QPELCITAAYG 146 (378)
Q Consensus 116 ~v~~~~~~~~~~~~~~l~~~--~~Dliv~~~~~ 146 (378)
++ ....+.-++++.|++. ..-++++.+..
T Consensus 66 -vi-~~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 96 (137)
T 2pln_A 66 -VM-VSDKNALSFVSRIKEKHSSIVVLVSSDNP 96 (137)
T ss_dssp -EE-ECSTTHHHHHHHHHHHSTTSEEEEEESSC
T ss_pred -EE-EcCccHHHHHHHHHhcCCCccEEEEeCCC
Confidence 33 3344556777777776 34456665553
No 114
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=65.87 E-value=23 Score=33.34 Aligned_cols=100 Identities=21% Similarity=0.316 Sum_probs=54.8
Q ss_pred CceEEEEecCcc-hHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHH----HHHHHCCCCCceecCCCCC
Q 048078 49 KKPLVFLGSPQV-SVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVA----QYALDRGFPADLIFTPERA 123 (378)
Q Consensus 49 ~~rIvf~Gs~~~-a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~----~~A~~~gIp~~~v~~~~~~ 123 (378)
.+||+|+|-..- +.+.+..+-. .++++. ++.|+.- . .+..+. ++|++.|..+. +. .+
T Consensus 146 gl~va~vGD~~~va~Sl~~~~~~------~G~~v~--~~~P~~~-----~-~~~~~~~~~~~~a~~~g~~~~-~~--~d- 207 (307)
T 3tpf_A 146 IAKVAFIGDSNNMCNSWLITAAI------LGFEIS--IAMPKNY-----K-ISPEIWEFAMKQALISGAKIS-LG--YD- 207 (307)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHH------HTCEEE--EECCTTC-----C-CCHHHHHHHHHHHHHHTCEEE-EE--SC-
T ss_pred CCEEEEEcCCCccHHHHHHHHHH------cCCEEE--EECCCcc-----C-CCHHHHHHHHHHHHHcCCeEE-EE--cC-
Confidence 689999997532 2222233322 256643 3334321 1 122343 44557787733 11 11
Q ss_pred CcHHHHHHHHhcCCcEEEEecC-----------------CCcCChhhhcCCCCceEEEccCCCCCCCC
Q 048078 124 GEDAFLSNLRALQPELCITAAY-----------------GNILPSKFLNIPPMGTVNIHPSLLPLYRG 174 (378)
Q Consensus 124 ~~~~~~~~l~~~~~Dliv~~~~-----------------~~ilp~~il~~~~~g~iNiHpSlLP~yRG 174 (378)
+.+.+ .++|++.+-.| .+.|..++++..+-.++-+|| ||.+||
T Consensus 208 ----~~eav--~~aDvvyt~~w~smg~e~~~~~~~~~~~~y~v~~e~l~~a~~~ai~mH~--lPa~Rg 267 (307)
T 3tpf_A 208 ----KFEAL--KDKDVVITDTWVSMGEENEKERKIKEFEGFMIDEKAMSVANKDAILLHC--LPAYRG 267 (307)
T ss_dssp ----HHHHH--TTCSEEEECCSSCTTGGGGHHHHHHHTGGGCBCHHHHHHSCTTCEEEEC--SCCCBT
T ss_pred ----HHHHh--cCCCEEEecCcccCCchhhHHHHHHHhcccccCHHHHHhcCCCcEEECC--CCCCCC
Confidence 12233 36788877664 244677777767778999998 488887
No 115
>4etm_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.60A {Bacillus subtilis}
Probab=65.52 E-value=47 Score=28.34 Aligned_cols=93 Identities=6% Similarity=0.001 Sum_probs=47.2
Q ss_pred CCCCCCCCCceEEEEecCcchH-----HHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCc
Q 048078 41 PSAFSVSRKKPLVFLGSPQVSV-----NVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPAD 115 (378)
Q Consensus 41 ~~~~~~~~~~rIvf~Gs~~~a~-----~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~ 115 (378)
+........+||+|+=+++..- .+|+.+++.... ...++|..-=|..-. .| . .......+.++++||+..
T Consensus 10 ~~~~~~~~M~kVLFVCtGNiCRSpmAE~i~r~~~~~~gl-~~~~~v~SAGt~~~~-~G--~-~~d~~a~~~l~~~Gid~s 84 (173)
T 4etm_A 10 GQQMGRGSMISVLFVCLGNICRSPMAEAIFRDLAAKKGL-EGKIKADSAGIGGWH-IG--N-PPHEGTQEILRREGISFD 84 (173)
T ss_dssp CC--CCSSCEEEEEEESSSSSHHHHHHHHHHHHHHHTTC-TTTEEEEEEESSCTT-TT--C-CCCHHHHHHHHHTTCCCT
T ss_pred CCcCCCCCccEEEEEeCCcchhhHHHHHHHHHHHHHcCC-CCceEEeccccccCC-CC--C-CCCHHHHHHHHHCCcccc
Confidence 3333455567999998887433 344444432211 113555433232110 11 1 122356788899999932
Q ss_pred eecCCCCCCcHHHHHHHHhcCCcEEEEecC
Q 048078 116 LIFTPERAGEDAFLSNLRALQPELCITAAY 145 (378)
Q Consensus 116 ~v~~~~~~~~~~~~~~l~~~~~Dliv~~~~ 145 (378)
. ..+..+..+.+ ..+|+||++.-
T Consensus 85 ~-h~ar~l~~~d~------~~~DlIl~Md~ 107 (173)
T 4etm_A 85 G-MLARQVSEQDL------DDFDYIIAMDA 107 (173)
T ss_dssp T-CCCCBCCHHHH------HHCSEEEESSH
T ss_pred C-CccccCCHhhc------CCCCEEEEeCc
Confidence 1 22344444332 24899999764
No 116
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=65.21 E-value=2.6 Score=42.90 Aligned_cols=90 Identities=17% Similarity=0.287 Sum_probs=58.4
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCC--CCceecCCCCCCcH
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGF--PADLIFTPERAGED 126 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gI--p~~~v~~~~~~~~~ 126 (378)
..||+++|.+.......+.|.+. +++++.|++...... ....+.++.+.... ... |.. ..+..
T Consensus 360 Gkrv~i~gd~~~~~~la~~L~El------Gm~vv~v~~~~~~~~------~~~~~~~ll~~~~~~~~~~-v~~--~~d~~ 424 (519)
T 1qgu_B 360 GKKFGLYGDPDFVMGLTRFLLEL------GCEPTVILSHNANKR------WQKAMNKMLDASPYGRDSE-VFI--NCDLW 424 (519)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHT------TCEEEEEEETTCCHH------HHHHHHHHHHHSTTCTTCE-EEE--SCCHH
T ss_pred CCEEEEECCchHHHHHHHHHHHC------CCEEEEEEeCCCCHH------HHHHHHHHHHhcCCCCCCE-EEE--CCCHH
Confidence 46999999877777777777763 799999888653211 11234555666522 122 322 22346
Q ss_pred HHHHHHHhcCCcEEEEecCCCcCChhh
Q 048078 127 AFLSNLRALQPELCITAAYGNILPSKF 153 (378)
Q Consensus 127 ~~~~~l~~~~~Dliv~~~~~~ilp~~i 153 (378)
++.+.+++.+||++|.-.+.+-+..+.
T Consensus 425 ~l~~~i~~~~pDLiig~~~~~~~a~~~ 451 (519)
T 1qgu_B 425 HFRSLMFTRQPDFMIGNSYGKFIQRDT 451 (519)
T ss_dssp HHHHHHHHHCCSEEEECGGGHHHHHHH
T ss_pred HHHHHHhhcCCCEEEECcchHHHHHHh
Confidence 677888999999999887766665544
No 117
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=65.17 E-value=16 Score=34.84 Aligned_cols=49 Identities=18% Similarity=0.230 Sum_probs=35.6
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCC
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFP 113 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp 113 (378)
++||++.|.|..+...++.|.+. ..+++++|..... ......+.+.|++
T Consensus 1 ~ikVgIiGaG~iG~~~~r~L~~~-----p~~elvav~d~~~-----------~~~~~~a~~~g~~ 49 (340)
T 1b7g_O 1 MVNVAVNGYGTIGKRVADAIIKQ-----PDMKLVGVAKTSP-----------NYEAFIAHRRGIR 49 (340)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTC-----TTEEEEEEECSSC-----------SHHHHHHHHTTCC
T ss_pred CeEEEEEecCHHHHHHHHHHHcC-----CCCEEEEEEcCCh-----------HHHHHHHHhcCcc
Confidence 47999999998888888887654 3689988865321 1345667777887
No 118
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=64.98 E-value=15 Score=33.96 Aligned_cols=40 Identities=20% Similarity=0.116 Sum_probs=22.4
Q ss_pred CCCCCCCCCceEEEEec-CcchHHHHHHHHHccCCCCCCceEEEEEc
Q 048078 41 PSAFSVSRKKPLVFLGS-PQVSVNVLDALFNASSSPDSIFEVAAIVT 86 (378)
Q Consensus 41 ~~~~~~~~~~rIvf~Gs-~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt 86 (378)
++.....++++|++.|. +.++..+.+.|++. +++|+++.-
T Consensus 11 ~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~------G~~V~~~~r 51 (347)
T 4id9_A 11 SSGLVPRGSHMILVTGSAGRVGRAVVAALRTQ------GRTVRGFDL 51 (347)
T ss_dssp ----------CEEEETTTSHHHHHHHHHHHHT------TCCEEEEES
T ss_pred CCcccccCCCEEEEECCCChHHHHHHHHHHhC------CCEEEEEeC
Confidence 34445566889999996 55666677888875 578877653
No 119
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=64.71 E-value=3.6 Score=41.55 Aligned_cols=114 Identities=12% Similarity=0.099 Sum_probs=68.8
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHHH
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAF 128 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~~ 128 (378)
-.||+++|.+.......+.|.+ .+++++++.|..... ....+.....+.... ++ ++.+..++
T Consensus 348 GKrv~i~g~~~~~~~la~~L~E------lGm~vv~~gt~~~~~---------~d~~~l~~~~~~~~~-i~--~~~d~~el 409 (492)
T 3u7q_A 348 GKRVMLYIGGLRPRHVIGAYED------LGMEVVGTGYEFAHN---------DDYDRTMKEMGDSTL-LY--DDVTGYEF 409 (492)
T ss_dssp TCEEEECBSSSHHHHTHHHHHT------TTCEEEEEEESSCCH---------HHHHHHHTTSCTTCE-EE--ESCBHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHH------CCCEEEEEeCCCCCH---------HHHHHHHHhCCCCcE-EE--cCCCHHHH
Confidence 3689999988777776676654 479999877754321 123333333332222 22 23345677
Q ss_pred HHHHHhcCCcEEEEecCCCcCChhhhcCCCCceEEEc----cCCCCCCCCchHHHHHHHc
Q 048078 129 LSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIH----PSLLPLYRGAAPVQRALQG 184 (378)
Q Consensus 129 ~~~l~~~~~Dliv~~~~~~ilp~~il~~~~~g~iNiH----pSlLP~yRG~~pi~wai~~ 184 (378)
.+.+++.+||++|.-++.+.+..+. ...++.+| ...+=-|+|+.-+...|.|
T Consensus 410 ~~~i~~~~pDL~ig~~~~~~ia~k~----gIP~~~~~~~d~~~p~~GY~Ga~~l~~~i~n 465 (492)
T 3u7q_A 410 EEFVKRIKPDLIGSGIKEKFIFQKM----GIPFREMHSWDYSGPYHGFDGFAIFARDMDM 465 (492)
T ss_dssp HHHHHHHCCSEEEECHHHHHHHHHT----TCCEEESSSGGGCCCCSHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCcEEEeCcchhHHHHHc----CCCEEeccccccCCCcEehhhHHHHHHHHHH
Confidence 8889999999999988776554433 33355555 2333347887666655544
No 120
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=64.61 E-value=3.9 Score=38.98 Aligned_cols=89 Identities=13% Similarity=0.207 Sum_probs=50.1
Q ss_pred CCCceEEEEecCcchHHHHHHHHHccC-CCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCC-CCCceecCCCCCC
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNASS-SPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG-FPADLIFTPERAG 124 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~~~-~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~g-Ip~~~v~~~~~~~ 124 (378)
.+++||+++|.+.++...++.|.+... ....+++|++|+........+. +......+.+++.| ++.. .+ +
T Consensus 2 Mk~irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~--idl~~~~~~~~~~g~~~~~-~~-----d 73 (325)
T 3ing_A 2 MKEIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRN--LDISSIISNKEKTGRISDR-AF-----S 73 (325)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSS--CCHHHHHHHHHHHSCSCSS-BC-----C
T ss_pred CceEEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccc--cCHHHHHHHhhhcCCCCcc-cC-----C
Confidence 357899999999999999998876310 0112588888875432211111 11123344445556 5421 11 1
Q ss_pred cHHHHHHHHhcCCcEEEEecCC
Q 048078 125 EDAFLSNLRALQPELCITAAYG 146 (378)
Q Consensus 125 ~~~~~~~l~~~~~Dliv~~~~~ 146 (378)
. .+.+.+.++|++|-+.-.
T Consensus 74 ~---~e~l~~~~iDvVVe~T~~ 92 (325)
T 3ing_A 74 G---PEDLMGEAADLLVDCTPA 92 (325)
T ss_dssp S---GGGGTTSCCSEEEECCCC
T ss_pred H---HHHhcCCCCCEEEECCCC
Confidence 1 234566789988876643
No 121
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=64.53 E-value=38 Score=33.49 Aligned_cols=86 Identities=13% Similarity=0.054 Sum_probs=47.5
Q ss_pred CCCCCCceEEEEecCcc--h-HHHHHHHHHc--cCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceec
Q 048078 44 FSVSRKKPLVFLGSPQV--S-VNVLDALFNA--SSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIF 118 (378)
Q Consensus 44 ~~~~~~~rIvf~Gs~~~--a-~~~L~~L~~~--~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~ 118 (378)
....++|||+++.+.-. + ...+..|++. .. ..+++|..+...++.. .++.+.....+ + +.
T Consensus 200 ~~~~~~~rI~~~~~~~~~~g~~~~~~~l~~~L~~~--~~~~~v~~~~~~~~~~---------~~~~~~~~~~~-~---~~ 264 (568)
T 2vsy_A 200 VRSKGPLRVGFVSNGFGAHPTGLLTVALFEALQRR--QPDLQMHLFATSGDDG---------STLRTRLAQAS-T---LH 264 (568)
T ss_dssp CCSSSCEEEEEEESCSSSSHHHHHHHHHHHHHHHH--CTTEEEEEEESSCCCS---------CHHHHHHHHTS-E---EE
T ss_pred CCCCCCeEEEEECcccccChHHHHHHHHHhhccCC--cccEEEEEEECCCCCc---------cHHHHHHHhcC-e---EE
Confidence 34577899999986532 1 2223334333 11 1368876554433211 13444445555 4 22
Q ss_pred CCCCCCcHHHHHHHHhcCCcEEEEec
Q 048078 119 TPERAGEDAFLSNLRALQPELCITAA 144 (378)
Q Consensus 119 ~~~~~~~~~~~~~l~~~~~Dliv~~~ 144 (378)
.........+.+.+++.++|+++...
T Consensus 265 ~~~~~~~~~l~~~i~~~~~Div~~~~ 290 (568)
T 2vsy_A 265 DVTALGHLATAKHIRHHGIDLLFDLR 290 (568)
T ss_dssp ECTTCCHHHHHHHHHHTTCSEEEECS
T ss_pred ECCCCCHHHHHHHHHhCCCCEEEECC
Confidence 22223456778889999999998754
No 122
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=64.10 E-value=18 Score=33.48 Aligned_cols=83 Identities=16% Similarity=0.172 Sum_probs=42.0
Q ss_pred CCCCCCCCceEEEEe-cCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCC
Q 048078 42 SAFSVSRKKPLVFLG-SPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTP 120 (378)
Q Consensus 42 ~~~~~~~~~rIvf~G-s~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~ 120 (378)
+.......|+|++.| ++.++..+.+.|++. +++|+++.-.++... .. +.++ .++. ++.
T Consensus 14 ~~~~~~~~~~vlVTGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~---~~-----l~~~---~~~~---~~~- 72 (333)
T 2q1w_A 14 LVPRGSHMKKVFITGICGQIGSHIAELLLER------GDKVVGIDNFATGRR---EH-----LKDH---PNLT---FVE- 72 (333)
T ss_dssp -------CCEEEEETTTSHHHHHHHHHHHHT------TCEEEEEECCSSCCG---GG-----SCCC---TTEE---EEE-
T ss_pred eeeecCCCCEEEEeCCccHHHHHHHHHHHHC------CCEEEEEECCCccch---hh-----Hhhc---CCce---EEE-
Confidence 344445568999998 555666677888875 578776643322110 00 0000 1332 222
Q ss_pred CCCCcH-HHHHHHHhcCCcEEEEecC
Q 048078 121 ERAGED-AFLSNLRALQPELCITAAY 145 (378)
Q Consensus 121 ~~~~~~-~~~~~l~~~~~Dliv~~~~ 145 (378)
.++.+. .+.+.++..++|++|-++.
T Consensus 73 ~Dl~d~~~~~~~~~~~~~D~vih~A~ 98 (333)
T 2q1w_A 73 GSIADHALVNQLIGDLQPDAVVHTAA 98 (333)
T ss_dssp CCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred EeCCCHHHHHHHHhccCCcEEEECce
Confidence 234444 3445566567999887664
No 123
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=63.76 E-value=21 Score=32.96 Aligned_cols=78 Identities=10% Similarity=0.062 Sum_probs=44.0
Q ss_pred CceEEEEe-cCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHH------CCCCCceecCCC
Q 048078 49 KKPLVFLG-SPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALD------RGFPADLIFTPE 121 (378)
Q Consensus 49 ~~rIvf~G-s~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~------~gIp~~~v~~~~ 121 (378)
.+||++.| ++.++..+++.|++. +++|.++.-.+... ...+..+... .++. +.. .
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~--------~~~~~~~~~~~~~~~~~~~~---~~~-~ 86 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLKL------NQVVIGLDNFSTGH--------QYNLDEVKTLVSTEQWSRFC---FIE-G 86 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT------TCEEEEEECCSSCC--------HHHHHHHHHTSCHHHHTTEE---EEE-C
T ss_pred CCeEEEECCCcHHHHHHHHHHHHC------CCEEEEEeCCCCCc--------hhhhhhhhhccccccCCceE---EEE-c
Confidence 67999999 455666777888875 57887765433221 0122222221 3454 333 2
Q ss_pred CCCcHHHHHHHHhcCCcEEEEecC
Q 048078 122 RAGEDAFLSNLRALQPELCITAAY 145 (378)
Q Consensus 122 ~~~~~~~~~~l~~~~~Dliv~~~~ 145 (378)
++.+.+.++.+-+ ++|++|-++.
T Consensus 87 Dl~d~~~~~~~~~-~~d~Vih~A~ 109 (351)
T 3ruf_A 87 DIRDLTTCEQVMK-GVDHVLHQAA 109 (351)
T ss_dssp CTTCHHHHHHHTT-TCSEEEECCC
T ss_pred cCCCHHHHHHHhc-CCCEEEECCc
Confidence 3444444433323 7999987765
No 124
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=63.29 E-value=28 Score=33.15 Aligned_cols=97 Identities=16% Similarity=0.268 Sum_probs=58.5
Q ss_pred CceEEEEecC--cchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCCh-HH----HHHHHHCCCCCceecCCC
Q 048078 49 KKPLVFLGSP--QVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPS-PV----AQYALDRGFPADLIFTPE 121 (378)
Q Consensus 49 ~~rIvf~Gs~--~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~-~v----~~~A~~~gIp~~~v~~~~ 121 (378)
.+||+++|-. ..+-+.+..+... ++++. ++.|+.- .+. .+ ++.|++.|..+. +. .
T Consensus 155 gl~ia~vGD~~~~va~Sl~~~~~~~------G~~v~--~~~P~~~-------~p~~~~~~~~~~~a~~~G~~v~-~~--~ 216 (333)
T 1duv_G 155 EMTLVYAGDARNNMGNSMLEAAALT------GLDLR--LVAPQAC-------WPEAALVTECRALAQQNGGNIT-LT--E 216 (333)
T ss_dssp GCEEEEESCTTSHHHHHHHHHHHHH------CCEEE--EECCGGG-------CCCHHHHHHHHHHHHHTTCEEE-EE--S
T ss_pred CcEEEEECCCccchHHHHHHHHHHc------CCEEE--EECCccc-------CCCHHHHHHHHHHHHHcCCeEE-EE--E
Confidence 5899999986 3444444444332 56653 3334321 122 24 445668997632 22 1
Q ss_pred CCCcHHHHHHHHhcCCcEEEEecC------------------CCcCChhhhcCC-CCceEEEccCCCCCC
Q 048078 122 RAGEDAFLSNLRALQPELCITAAY------------------GNILPSKFLNIP-PMGTVNIHPSLLPLY 172 (378)
Q Consensus 122 ~~~~~~~~~~l~~~~~Dliv~~~~------------------~~ilp~~il~~~-~~g~iNiHpSlLP~y 172 (378)
+ +.+.+ .++|++.+-.| .+-|..++++.. +-.++-+|| ||.+
T Consensus 217 d-----~~eav--~~aDvvytd~w~smg~~~~~~~er~~~~~~y~v~~~ll~~a~~~~ai~mHc--LP~~ 277 (333)
T 1duv_G 217 D-----VAKGV--EGADFIYTDVWVSMGEAKEKWAERIALLREYQVNSKMMQLTGNPEVKFLHC--LPAF 277 (333)
T ss_dssp C-----HHHHH--TTCSEEEECCSSCTTSCTTHHHHHHHHHGGGCBCHHHHHTTCCTTCEEEEC--SCCC
T ss_pred C-----HHHHh--CCCCEEEeCCccccCccccchHHHHHHhhccccCHHHHHhccCCCcEEECC--CCCC
Confidence 1 12333 46899988666 356788888887 777999998 5776
No 125
>2y1e_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase, DOXP/MEP pathway; 1.65A {Mycobacterium tuberculosis} PDB: 2jcv_A* 2jcz_A* 2jd2_A 2jd1_A 2y1d_A* 2y1c_A 2y1f_A* 2y1g_A* 3ras_A* 4a03_A* 4aic_A* 2jcx_A* 2jcy_A 2jd0_A* 2c82_A
Probab=63.17 E-value=13 Score=36.30 Aligned_cols=99 Identities=20% Similarity=0.272 Sum_probs=61.9
Q ss_pred CceEEEEec-CcchHHHHHHHHHccCCCCCCceEEEEEc-CCCCCCCCCCccCChHHHHHHHHCCCCCceecCCC-----
Q 048078 49 KKPLVFLGS-PQVSVNVLDALFNASSSPDSIFEVAAIVT-QPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPE----- 121 (378)
Q Consensus 49 ~~rIvf~Gs-~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt-~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~----- 121 (378)
+.||+++|| ++++..+|+-+.+.. ..++|+++.. ...- .-+.+.|++++-.+.++....
T Consensus 21 mk~i~ILGSTGSIGtqtLdVi~~~p----d~f~V~aLaa~g~nv----------~~L~~q~~~f~p~~v~v~d~~~~~~~ 86 (398)
T 2y1e_A 21 RLRVVVLGSTGSIGTQALQVIADNP----DRFEVVGLAAGGAHL----------DTLLRQRAQTGVTNIAVADEHAAQRV 86 (398)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCT----TTEEEEEEEECSSCH----------HHHHHHHHHHCCCCEEESCHHHHHHH
T ss_pred ceEEEEEccCcHHHHHHHHHHHhCC----CceEEEEEEecCCCH----------HHHHHHHHHcCCCEEEEcCHHHhhhc
Confidence 467999995 557777888776642 3599999987 4432 357788888887765442211
Q ss_pred --CC--CcHHHHHHHHhcCCcEEEEecCCCcCChhhhcCCCCceEEEccCCCCCCCCchHHHHHHHcCC
Q 048078 122 --RA--GEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQGGA 186 (378)
Q Consensus 122 --~~--~~~~~~~~l~~~~~Dliv~~~~~~ilp~~il~~~~~g~iNiHpSlLP~yRG~~pi~wai~~g~ 186 (378)
++ ..+.+.+......+|+++.+ +-.+.|..|...||..|.
T Consensus 87 ~~~v~~G~~~l~~~a~~~~~D~Vv~A-------------------------IvG~aGL~PTlaAi~aGK 130 (398)
T 2y1e_A 87 GDIPYHGSDAATRLVEQTEADVVLNA-------------------------LVGALGLRPTLAALKTGA 130 (398)
T ss_dssp CCCSEESTTHHHHHHHHSCCSEEEEC-------------------------CCSGGGHHHHHHHHHHTC
T ss_pred CCEEEecHHHHHHHhcCCCCCEEEEe-------------------------CcCHHHHHHHHHHHHCCC
Confidence 00 12223333333346665543 234567889999999986
No 126
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=63.09 E-value=6.1 Score=36.59 Aligned_cols=39 Identities=18% Similarity=0.239 Sum_probs=28.2
Q ss_pred CCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcC
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQ 87 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~ 87 (378)
++++||+++|.+.++...++.|.+.. ....+++++|+..
T Consensus 5 ~~~~rvgiIG~G~iG~~~~~~l~~~~--~~~~~~lvav~d~ 43 (294)
T 1lc0_A 5 SGKFGVVVVGVGRAGSVRLRDLKDPR--SAAFLNLIGFVSR 43 (294)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHTSHH--HHTTEEEEEEECS
T ss_pred CCcceEEEEEEcHHHHHHHHHHhccc--cCCCEEEEEEECc
Confidence 45899999999998888888775410 0025788888764
No 127
>3aek_A Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_A* 3aes_A* 3aer_A* 3aet_A 3aeu_A
Probab=62.13 E-value=5.5 Score=39.39 Aligned_cols=114 Identities=15% Similarity=0.098 Sum_probs=65.5
Q ss_pred CceEEEEecCcchHHHHHHH-HHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 49 KKPLVFLGSPQVSVNVLDAL-FNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L-~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
..|++++|.+.......+.| .+ .+++++.++|.-... ....+..+..+-... |. .+.+..+
T Consensus 307 Gkrv~i~g~~~~~~~l~~~L~~e------lG~~vv~~~~~~~~~---------~~~~~~l~~l~~~~~-v~--~~~d~~e 368 (437)
T 3aek_A 307 GKSLFMFPDSQLEIPLARFLARE------CGMKTTEIATPFLHK---------AIMAPDLALLPSNTA-LT--EGQDLEA 368 (437)
T ss_dssp TCEEEECSSSSCHHHHHHHHHHT------TCCEEEEEEESCCCH---------HHHHHHHTTSBTTCE-EE--EECCHHH
T ss_pred CCEEEEEcCchHHHHHHHHHHHH------cCCEEEEEEecCCCH---------HHHHHHHHhcCCCCE-EE--eCCCHHH
Confidence 36999999988888877777 44 379999998843221 011222222222211 22 1234557
Q ss_pred HHHHHHhcCCcEEEEecCCCcCChhhhcCCCCce---EEEccCCCCCCCCchHHHHHHHc
Q 048078 128 FLSNLRALQPELCITAAYGNILPSKFLNIPPMGT---VNIHPSLLPLYRGAAPVQRALQG 184 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~~~~ilp~~il~~~~~g~---iNiHpSlLP~yRG~~pi~wai~~ 184 (378)
+.+.+++.+||++|.-++..- .+......+ ++.+....=-|+|+.-+...|.|
T Consensus 369 ~~~~i~~~~pDliig~~~~~~----p~~~~G~P~~d~~~~~~~p~~Gy~G~~~l~~~i~~ 424 (437)
T 3aek_A 369 QLDRHEAINPDLTVCGLGLAN----PLEAKGHATKWAIELVFTPVHFYEQAGDLAGLFSR 424 (437)
T ss_dssp HHHHHHHHCCSEEEECHHHHH----HHHTTTCCEEEGGGGTSSCCSSSTTHHHHHHHHHH
T ss_pred HHHHHhccCCCEEEeCCcccc----HHHHCCCCEEeecCCCcCCcchHHHHHHHHHHHHH
Confidence 779999999999996554211 122122222 33344556679998666655543
No 128
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=61.68 E-value=8.4 Score=34.40 Aligned_cols=99 Identities=10% Similarity=0.169 Sum_probs=54.9
Q ss_pred CCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCC-CCCCCCccCChHHHHHHHHCCCCCceecCCCCCCc
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPS-RRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGE 125 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~-~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~ 125 (378)
.+..||+++|.++.+...++.+ .....++++++++-..+. ..|+. . -.|+| |+..
T Consensus 82 ~~~~~V~IvGaG~lG~aLa~~~----~~~~~g~~iVg~~D~dp~~kiG~~-~-----------i~Gvp---V~~~----- 137 (212)
T 3keo_A 82 HSTTNVMLVGCGNIGRALLHYR----FHDRNKMQISMAFDLDSNDLVGKT-T-----------EDGIP---VYGI----- 137 (212)
T ss_dssp TSCEEEEEECCSHHHHHHTTCC----CCTTSSEEEEEEEECTTSTTTTCB-C-----------TTCCB---EEEG-----
T ss_pred CCCCEEEEECcCHHHHHHHHhh----hcccCCeEEEEEEeCCchhccCce-e-----------ECCeE---EeCH-----
Confidence 4467999999997554443332 112347999999965544 43320 1 24677 5432
Q ss_pred HHHHHHHHhcCCcEEEEecCCCcCChhhhc----CCCCceEEEccCCCC
Q 048078 126 DAFLSNLRALQPELCITAAYGNILPSKFLN----IPPMGTVNIHPSLLP 170 (378)
Q Consensus 126 ~~~~~~l~~~~~Dliv~~~~~~ilp~~il~----~~~~g~iNiHpSlLP 170 (378)
+++.+.+++.++|.++++- ...-.+++.+ .-=.+++||=|--|-
T Consensus 138 ~dL~~~v~~~~Id~vIIAv-Ps~~aq~v~d~lv~~GIk~I~nFap~~l~ 185 (212)
T 3keo_A 138 STINDHLIDSDIETAILTV-PSTEAQEVADILVKAGIKGILSFSPVHLT 185 (212)
T ss_dssp GGHHHHC-CCSCCEEEECS-CGGGHHHHHHHHHHHTCCEEEECSSSCCC
T ss_pred HHHHHHHHHcCCCEEEEec-CchhHHHHHHHHHHcCCCEEEEcCCcccC
Confidence 2345566677777777654 2222222322 233467787777653
No 129
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=61.64 E-value=20 Score=34.25 Aligned_cols=74 Identities=18% Similarity=0.197 Sum_probs=44.6
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
+.+||+++|++..+...++++.+. ++++++| +.++.. .+-.++|.+. +. .+..+.+.
T Consensus 6 ~~~~ilI~g~g~~~~~~~~a~~~~------G~~~v~v-~~~~~~---------~~~~~~ad~~------~~-~~~~d~~~ 62 (403)
T 4dim_A 6 DNKRLLILGAGRGQLGLYKAAKEL------GIHTIAG-TMPNAH---------KPCLNLADEI------SY-MDISNPDE 62 (403)
T ss_dssp CCCEEEEECCCGGGHHHHHHHHHH------TCEEEEE-ECSSCC---------HHHHHHCSEE------EE-CCTTCHHH
T ss_pred CCCEEEEECCcHhHHHHHHHHHHC------CCEEEEE-cCCCCC---------CcchhhCCeE------EE-ecCCCHHH
Confidence 367999999999999999988775 6888777 433311 1222333211 11 11123455
Q ss_pred HHHHHHhcCCcEEEEec
Q 048078 128 FLSNLRALQPELCITAA 144 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~ 144 (378)
+++.+++.++|.++..+
T Consensus 63 l~~~~~~~~~d~v~~~~ 79 (403)
T 4dim_A 63 VEQKVKDLNLDGAATCC 79 (403)
T ss_dssp HHHHTTTSCCSEEECCS
T ss_pred HHHHHHHcCCCEEEeCC
Confidence 66667777777776543
No 130
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=61.58 E-value=7.8 Score=34.68 Aligned_cols=70 Identities=10% Similarity=0.243 Sum_probs=43.5
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCc----eEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCC
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIF----EVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAG 124 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~----ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~ 124 (378)
.+||+|+|.+.++....+.|.+. ++ +|. ++ +++. ..+.++++++|+. +.. +
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~~------g~~~~~~V~-~~-~r~~----------~~~~~~~~~~g~~---~~~----~ 56 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMINK------NIVSSNQII-CS-DLNT----------ANLKNASEKYGLT---TTT----D 56 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT------TSSCGGGEE-EE-CSCH----------HHHHHHHHHHCCE---ECS----C
T ss_pred CCeEEEECccHHHHHHHHHHHhC------CCCCCCeEE-EE-eCCH----------HHHHHHHHHhCCE---EeC----C
Confidence 47999999999999999999885 33 553 33 3321 2356666677876 321 1
Q ss_pred cHHHHHHHHhcCCcEEEEecCCCc
Q 048078 125 EDAFLSNLRALQPELCITAAYGNI 148 (378)
Q Consensus 125 ~~~~~~~l~~~~~Dliv~~~~~~i 148 (378)
.++ .++ ++|++|++--.+.
T Consensus 57 ~~e---~~~--~aDvVilav~~~~ 75 (247)
T 3gt0_A 57 NNE---VAK--NADILILSIKPDL 75 (247)
T ss_dssp HHH---HHH--HCSEEEECSCTTT
T ss_pred hHH---HHH--hCCEEEEEeCHHH
Confidence 122 222 4788887764433
No 131
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=61.45 E-value=34 Score=31.47 Aligned_cols=17 Identities=6% Similarity=0.341 Sum_probs=13.7
Q ss_pred HHHHHHhcCCcEEEEec
Q 048078 128 FLSNLRALQPELCITAA 144 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~ 144 (378)
+.+.+++.+||++++.+
T Consensus 87 l~~~l~~~~pDvv~~~~ 103 (375)
T 3beo_A 87 LDKVMKEAKPDIVLVHG 103 (375)
T ss_dssp HHHHHHHHCCSEEEEET
T ss_pred HHHHHHHhCCCEEEEeC
Confidence 45677889999999865
No 132
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=61.38 E-value=18 Score=36.83 Aligned_cols=126 Identities=13% Similarity=0.115 Sum_probs=68.7
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCC---C--------------------------CCCccC
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRR---D--------------------------RGRKVL 99 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~---g--------------------------rg~~~~ 99 (378)
..|++++|.+..+....+.|.+. +++++++.|.-.... + +-+...
T Consensus 335 GKrv~i~~~~~~~~~l~~~l~El------Gm~vv~~~t~~~~~~~~~~~~~~p~~~~~~d~~~~~~~~~~~~~~~~~~~~ 408 (533)
T 1mio_A 335 GKTACLYVGGSRSHTYMNMLKSF------GVDSLVAGFEFAHRDDYEGREVIPTIKIDADSKNIPEITVTPDEQKYRVVI 408 (533)
T ss_dssp TCEEEEEESSSHHHHHHHHHHHH------TCEEEEEEESSCCHHHHHCGGGTTTCCCCSSCCCCCCCCCCCCSSSCCCSS
T ss_pred CCEEEEECCchHHHHHHHHHHHC------CCEEEEEEeccCcchhhhhhccCcccccccccccccccccccchhhhcccc
Confidence 46899999887777777766553 799999886432100 0 000011
Q ss_pred ChHHHHHHHHCCCCCcee-----------cCCCCCCcHHHHHHHHhcCCcEEEEecCCCcCChhhhcCCCCceEEEcc--
Q 048078 100 PSPVAQYALDRGFPADLI-----------FTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHP-- 166 (378)
Q Consensus 100 ~~~v~~~A~~~gIp~~~v-----------~~~~~~~~~~~~~~l~~~~~Dliv~~~~~~ilp~~il~~~~~g~iNiHp-- 166 (378)
...-.+...+.|+++..+ .-.++.+..++.+.+++.+||+++.-.+.+.+-. .....++.+|.
T Consensus 409 ~~e~~~~l~~~g~~~~~y~~~~~~~~~~~~i~~d~d~~el~~~i~~~~pDl~ig~~~~~~~a~----k~gIP~~~~~~~~ 484 (533)
T 1mio_A 409 PEDKVEELKKAGVPLSSYGGMMKEMHDGTILIDDMNHHDMEVVLEKLKPDMFFAGIKEKFVIQ----KGGVLSKQLHSYD 484 (533)
T ss_dssp CTHHHHHHHGGGCCBTCCCCGGGTSCTTEEEEESCBHHHHHHHHHHHCCSEEEECHHHHHHHH----HTTCEEEETTTTT
T ss_pred cHHHHHHHHhcccccccccchhhccCCCcEEEeCCCHHHHHHHHHhcCCCEEEcccchhHHHH----hcCCCEEEeeccc
Confidence 112334444554442110 0012334567778899999999987665433322 22344666663
Q ss_pred --CCCCCCCCchHHHHHHHc
Q 048078 167 --SLLPLYRGAAPVQRALQG 184 (378)
Q Consensus 167 --SlLP~yRG~~pi~wai~~ 184 (378)
+.+=-|+|+.-+-.-|.|
T Consensus 485 ~~~p~~Gy~Ga~~l~~~i~~ 504 (533)
T 1mio_A 485 YNGPYAGFRGVVNFGHELVN 504 (533)
T ss_dssp SCCCCSSSHHHHHHHHHHHH
T ss_pred ccccceehhhHHHHHHHHHH
Confidence 344557776555544443
No 133
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=61.32 E-value=45 Score=31.25 Aligned_cols=38 Identities=24% Similarity=0.281 Sum_probs=28.4
Q ss_pred cCCcEEEEecC-----------------CCcCChhhhcCCCCceEEEccCCCCCCCC
Q 048078 135 LQPELCITAAY-----------------GNILPSKFLNIPPMGTVNIHPSLLPLYRG 174 (378)
Q Consensus 135 ~~~Dliv~~~~-----------------~~ilp~~il~~~~~g~iNiHpSlLP~yRG 174 (378)
.++|++.+-.| .+.|.+++++..+-.++-+|| ||.+||
T Consensus 212 ~~aDvvy~~~~~smg~~~~~~~~~~~~~~y~v~~e~l~~a~~~ai~mHp--lP~~Rg 266 (301)
T 2ef0_A 212 LGAHALYTDVWTSMGQEAEREKRLRDFQGFQVNGELLKLLRPEGVFLHC--LPAHYG 266 (301)
T ss_dssp TTCSEEEECCCC--------CHHHHHTTTCCBCHHHHTTSCTTCEEEEC--SCCCBT
T ss_pred cCCCEEEecCcccCCcccchhHHHHHhhccccCHHHHHhcCCCcEEECC--CCCCCC
Confidence 35777777554 355677888877778999996 689987
No 134
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=61.21 E-value=34 Score=32.99 Aligned_cols=98 Identities=15% Similarity=0.197 Sum_probs=58.7
Q ss_pred CCceEEEEecC--cchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCCh-HH----HHHHHHCCCCCceecCC
Q 048078 48 RKKPLVFLGSP--QVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPS-PV----AQYALDRGFPADLIFTP 120 (378)
Q Consensus 48 ~~~rIvf~Gs~--~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~-~v----~~~A~~~gIp~~~v~~~ 120 (378)
..++|+++|-. ..+-+.+..+... ++++. ++.|+.. .+. .+ ++.|++.|..+. +.
T Consensus 175 ~gl~va~vGD~~~rva~Sl~~~~~~l------G~~v~--~~~P~~l-------~p~~~~~~~~~~~a~~~G~~v~-~~-- 236 (359)
T 2w37_A 175 QGLTLTFMGDGRNNVANSLLVTGAIL------GVNIH--IVAPKAL-------FPTEETQNIAKGFAEKSGAKLV-IT-- 236 (359)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHHHH------TCEEE--EECCGGG-------SCCHHHHHHHHHHHHHHTCCEE-EE--
T ss_pred CCeEEEEECCCccchHHHHHHHHHHc------CCEEE--EECCccc-------cCCHHHHHHHHHHHHHcCCeEE-EE--
Confidence 46899999985 4444444444332 56653 3334321 122 24 345558887733 22
Q ss_pred CCCCcHHHHHHHHhcCCcEEEEecC----------------CCcCChhhhcCCC---CceEEEccCCCCCC
Q 048078 121 ERAGEDAFLSNLRALQPELCITAAY----------------GNILPSKFLNIPP---MGTVNIHPSLLPLY 172 (378)
Q Consensus 121 ~~~~~~~~~~~l~~~~~Dliv~~~~----------------~~ilp~~il~~~~---~g~iNiHpSlLP~y 172 (378)
.+ +.+.+ .++|++.+-.| .+-|..++++..+ -.++-+|| ||.+
T Consensus 237 ~d-----~~eav--~~aDvvytd~w~smg~ee~~er~~~~~~y~v~~ell~~ak~~~~dai~MHc--LP~~ 298 (359)
T 2w37_A 237 DD-----LDEGL--KGSNVVYTDVWVSMGESNWEERVKELTPYQVNMEAMKKTGTPDDQLIFMHC--LPAF 298 (359)
T ss_dssp SC-----HHHHH--TTCSEEEECCSCCTTCTTHHHHHHHHGGGCBCHHHHHTTCCCGGGCEEEEC--SCCC
T ss_pred eC-----HHHHh--cCCCEEEEcccccccccchHHHHHHhhccccCHHHHHhhCCCCCCEEEECC--CCCC
Confidence 11 12333 47899988777 3667788888777 68999998 4666
No 135
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=60.82 E-value=12 Score=35.68 Aligned_cols=27 Identities=15% Similarity=0.197 Sum_probs=17.7
Q ss_pred CCCCCCceEEEEecCcchHHHHHHHHH
Q 048078 44 FSVSRKKPLVFLGSPQVSVNVLDALFN 70 (378)
Q Consensus 44 ~~~~~~~rIvf~Gs~~~a~~~L~~L~~ 70 (378)
.-..++|||+++|++.++..+.+.|.+
T Consensus 11 ~~~g~~mkilvlGaG~vG~~~~~~L~~ 37 (365)
T 3abi_A 11 HIEGRHMKVLILGAGNIGRAIAWDLKD 37 (365)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHTT
T ss_pred cccCCccEEEEECCCHHHHHHHHHHhc
Confidence 345678999999998877777776643
No 136
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=60.55 E-value=15 Score=36.46 Aligned_cols=86 Identities=14% Similarity=0.198 Sum_probs=54.7
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCC-CCCceecCCCCCCcHH
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG-FPADLIFTPERAGEDA 127 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~g-Ip~~~v~~~~~~~~~~ 127 (378)
..|++++|.+..+....+.|.+ .+++++.|++...... ....+.++.++.+ .... |.. ..+..+
T Consensus 312 gkrv~i~~~~~~~~~l~~~L~e------lG~~vv~v~~~~~~~~------~~~~~~~ll~~~~~~~~~-v~~--~~d~~~ 376 (458)
T 1mio_B 312 GKKVALLGDPDEIIALSKFIIE------LGAIPKYVVTGTPGMK------FQKEIDAMLAEAGIEGSK-VKV--EGDFFD 376 (458)
T ss_dssp TCEEEEEECHHHHHHHHHHHHT------TTCEEEEEEESSCCHH------HHHHHHHHHHTTTCCSCE-EEE--SCBHHH
T ss_pred CCEEEEEcCchHHHHHHHHHHH------CCCEEEEEEeCCCCHH------HHHHHHHHHHhcCCCCCE-EEE--CCCHHH
Confidence 4699999998777777777764 3799999988653211 1123445555554 3322 322 123456
Q ss_pred HHHHHHhcCCcEEEEecCCCcC
Q 048078 128 FLSNLRALQPELCITAAYGNIL 149 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~~~~il 149 (378)
+.+.+++.+||+++.-++.+-+
T Consensus 377 l~~~i~~~~pDl~ig~~~~~~~ 398 (458)
T 1mio_B 377 VHQWIKNEGVDLLISNTYGKFI 398 (458)
T ss_dssp HHHHHHHSCCSEEEESGGGHHH
T ss_pred HHHHHHhcCCCEEEeCcchHHH
Confidence 7788899999999976664433
No 137
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=60.49 E-value=21 Score=33.79 Aligned_cols=81 Identities=14% Similarity=0.081 Sum_probs=43.3
Q ss_pred CCceEEEEecCcc-----hHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCC--
Q 048078 48 RKKPLVFLGSPQV-----SVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTP-- 120 (378)
Q Consensus 48 ~~~rIvf~Gs~~~-----a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~-- 120 (378)
++.||++.|.+.- +..+.++|.+. +++|..|-+.. .. -.++..+.|++++.+...
T Consensus 1 M~~~i~i~~GGTgGHi~palala~~L~~~------g~~V~~vg~~~-g~-----------e~~~v~~~g~~~~~i~~~~~ 62 (365)
T 3s2u_A 1 MKGNVLIMAGGTGGHVFPALACAREFQAR------GYAVHWLGTPR-GI-----------ENDLVPKAGLPLHLIQVSGL 62 (365)
T ss_dssp --CEEEEECCSSHHHHHHHHHHHHHHHHT------TCEEEEEECSS-ST-----------HHHHTGGGTCCEEECC----
T ss_pred CCCcEEEEcCCCHHHHHHHHHHHHHHHhC------CCEEEEEECCc-hH-----------hhchhhhcCCcEEEEECCCc
Confidence 3579999987641 22334566553 68887664432 11 134556778885432110
Q ss_pred -C-----CCCc--------HHHHHHHHhcCCcEEEEecCC
Q 048078 121 -E-----RAGE--------DAFLSNLRALQPELCITAAYG 146 (378)
Q Consensus 121 -~-----~~~~--------~~~~~~l~~~~~Dliv~~~~~ 146 (378)
. .+.. ......|++++||++|+.+..
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~PDvVi~~g~~ 102 (365)
T 3s2u_A 63 RGKGLKSLVKAPLELLKSLFQALRVIRQLRPVCVLGLGGY 102 (365)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHCCSEEEECSSS
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCc
Confidence 0 0000 122356788999999987653
No 138
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=60.24 E-value=39 Score=32.14 Aligned_cols=104 Identities=14% Similarity=0.172 Sum_probs=56.6
Q ss_pred CCCceEEEEecCc--chHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHH----HHHHHH--CCCCCceec
Q 048078 47 SRKKPLVFLGSPQ--VSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPV----AQYALD--RGFPADLIF 118 (378)
Q Consensus 47 ~~~~rIvf~Gs~~--~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v----~~~A~~--~gIp~~~v~ 118 (378)
-..+||+|+|-.. .+.+.+..+... ++++. ++.|+.-. ..+ +..+ +++|++ .|..+. +.
T Consensus 159 l~gl~va~vGD~~~~va~Sl~~~~~~~------G~~v~--~~~P~~~~---~~p-~~~~~~~~~~~~~~~~~g~~v~-~~ 225 (328)
T 3grf_A 159 FKGIKFAYCGDSMNNVTYDLMRGCALL------GMECH--VCCPDHKD---FKP-IKEVIDECEEIIAKHGTGGSIK-IF 225 (328)
T ss_dssp GGGCCEEEESCCSSHHHHHHHHHHHHH------TCEEE--EECCSSGG---GSC-CHHHHHHHHHHHHHHTCCCEEE-EE
T ss_pred cCCcEEEEeCCCCcchHHHHHHHHHHc------CCEEE--EECChHhh---hCC-CHHHHHHHHHHHhhccCCCeEE-EE
Confidence 3468999999862 223333333322 45543 33343210 001 1123 344555 676633 22
Q ss_pred CCCCCCcHHHHHHHHhcCCcEEEEecC------------------CCcCChhhhcCCCCceEEEccCCCCCCCC
Q 048078 119 TPERAGEDAFLSNLRALQPELCITAAY------------------GNILPSKFLNIPPMGTVNIHPSLLPLYRG 174 (378)
Q Consensus 119 ~~~~~~~~~~~~~l~~~~~Dliv~~~~------------------~~ilp~~il~~~~~g~iNiHpSlLP~yRG 174 (378)
.+ +.+.+ .++|++.+-.| .+.|..++++..+-.++-+|| ||.+||
T Consensus 226 --~d-----~~eav--~~aDvvytd~W~sm~iq~er~~~~~~~~~~y~vt~~~l~~a~~~ai~mH~--lPa~Rg 288 (328)
T 3grf_A 226 --HD-----CKKGC--EGVDVVYTDSWMSYHITKEQKEARLKVLTPFQVDDAVMAVTSKRSIFMNC--LPATRG 288 (328)
T ss_dssp --SS-----HHHHH--TTCSEEEECCCC--------CCTHHHHHGGGCBCHHHHTTSCTTCEEEEC--SCCCTT
T ss_pred --cC-----HHHHh--cCCCEEEecCccccCCcHHHHHHHHHHhcCCCCCHHHHHhcCCCCEEECC--CCCCCC
Confidence 11 12333 46888886433 244777888877778999998 588887
No 139
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=60.04 E-value=26 Score=33.46 Aligned_cols=97 Identities=13% Similarity=0.190 Sum_probs=58.2
Q ss_pred CceEEEEecC--cchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCCh-HH----HHHHHHCCCCCceecCCC
Q 048078 49 KKPLVFLGSP--QVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPS-PV----AQYALDRGFPADLIFTPE 121 (378)
Q Consensus 49 ~~rIvf~Gs~--~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~-~v----~~~A~~~gIp~~~v~~~~ 121 (378)
.+||+++|-. ..+.+.+..+.. .++++. ++.|+.- .+. .+ ++.|++.|..+. +. .
T Consensus 155 gl~va~vGD~~~~va~Sl~~~~~~------~G~~v~--~~~P~~~-------~p~~~~~~~~~~~a~~~G~~v~-~~--~ 216 (335)
T 1dxh_A 155 DISYAYLGDARNNMGNSLLLIGAK------LGMDVR--IAAPKAL-------WPHDEFVAQCKKFAEESGAKLT-LT--E 216 (335)
T ss_dssp GCEEEEESCCSSHHHHHHHHHHHH------TTCEEE--EECCGGG-------SCCHHHHHHHHHHHHHHTCEEE-EE--S
T ss_pred CeEEEEecCCccchHHHHHHHHHH------cCCEEE--EECCccc-------CCCHHHHHHHHHHHHHcCCeEE-EE--e
Confidence 5899999986 344444444433 256653 3334321 122 24 345558887632 22 1
Q ss_pred CCCcHHHHHHHHhcCCcEEEEecC------------------CCcCChhhhcCC-CCceEEEccCCCCCC
Q 048078 122 RAGEDAFLSNLRALQPELCITAAY------------------GNILPSKFLNIP-PMGTVNIHPSLLPLY 172 (378)
Q Consensus 122 ~~~~~~~~~~l~~~~~Dliv~~~~------------------~~ilp~~il~~~-~~g~iNiHpSlLP~y 172 (378)
+ +.+.+ .++|++.+-.| .+-|..++++.. +-.++-+|| ||.+
T Consensus 217 d-----~~eav--~~aDvvytd~w~smg~~~e~~~er~~~~~~y~v~~~ll~~a~~~~ai~mHc--LP~~ 277 (335)
T 1dxh_A 217 D-----PKEAV--KGVDFVHTDVWVSMGEPVEAWGERIKELLPYQVNMEIMKATGNPRAKFMHC--LPAF 277 (335)
T ss_dssp C-----HHHHT--TTCSEEEECCCSCSSSCGGGCHHHHHHHGGGCBCHHHHHTTCCSSCEEEEC--SCCC
T ss_pred C-----HHHHh--CCCCEEEeCCccccCccchhhHHHHHHhhcceeCHHHHHhccCCCeEEECC--CCCC
Confidence 1 12333 46899988676 356788888887 777999998 5776
No 140
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=59.92 E-value=38 Score=31.87 Aligned_cols=100 Identities=12% Similarity=0.104 Sum_probs=57.7
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
..+||+++|.... ..+...++.... ..++++ +++.|+.- . .+..+.++|++.|..+. + ..+. +
T Consensus 154 ~gl~va~vGD~~~-~rva~Sl~~~~~--~~G~~v--~~~~P~~~-----~-~~~~~~~~~~~~g~~~~-~--~~d~--~- 216 (308)
T 1ml4_A 154 DGLKIGLLGDLKY-GRTVHSLAEALT--FYDVEL--YLISPELL-----R-MPRHIVEELREKGMKVV-E--TTTL--E- 216 (308)
T ss_dssp SSEEEEEESCTTT-CHHHHHHHHHGG--GSCEEE--EEECCGGG-----C-CCHHHHHHHHHTTCCEE-E--ESCT--H-
T ss_pred CCeEEEEeCCCCc-CchHHHHHHHHH--HCCCEE--EEECCccc-----c-CCHHHHHHHHHcCCeEE-E--EcCH--H-
Confidence 4689999998521 123333333211 024554 34444321 0 12347888999998833 1 1221 1
Q ss_pred HHHHHHhcCCcEEEEecC----------------CCcCChhhhcCCCCceEEEccCC
Q 048078 128 FLSNLRALQPELCITAAY----------------GNILPSKFLNIPPMGTVNIHPSL 168 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~~----------------~~ilp~~il~~~~~g~iNiHpSl 168 (378)
+.+ .++|++.+-.| .+-|.+++++..+-.++-+||.+
T Consensus 217 --eav--~~aDvvyt~~~q~er~~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~lP 269 (308)
T 1ml4_A 217 --DVI--GKLDVLYVTRIQKERFPDEQEYLKVKGSYQVNLKVLEKAKDELRIMHPLP 269 (308)
T ss_dssp --HHH--TTCSEEEECCCCGGGSSSHHHHHTTTTCCCBCTTGGGGSCTTCEEECCSC
T ss_pred --HHh--cCCCEEEECCccccccCCHHHHHHHhcCcccCHHHHhhcCCCCEEECCCC
Confidence 223 36888888655 35577788887777899999765
No 141
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=59.78 E-value=43 Score=31.52 Aligned_cols=97 Identities=11% Similarity=0.111 Sum_probs=53.6
Q ss_pred CCceEEEEecC---cchHHHHHHHHHccCCCCC-CceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCC
Q 048078 48 RKKPLVFLGSP---QVSVNVLDALFNASSSPDS-IFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERA 123 (378)
Q Consensus 48 ~~~rIvf~Gs~---~~a~~~L~~L~~~~~~~~~-~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~ 123 (378)
..+||+++|.. ..+.+.+..+-. . ++++. ++.|+.- ..+..+.++|++.|..+.. ..+.
T Consensus 153 ~gl~va~vGD~~~~rva~Sl~~~~~~------~~g~~v~--~~~P~~~------~~~~~~~~~~~~~g~~~~~---~~d~ 215 (310)
T 3csu_A 153 DNLHVAMVGDLKYGRTVHSLTQALAK------FDGNRFY--FIAPDAL------AMPQYILDMLDEKGIAWSL---HSSI 215 (310)
T ss_dssp SSCEEEEESCTTTCHHHHHHHHHHHT------SSSCEEE--EECCGGG------CCCHHHHHHHHHTTCCEEE---CSCG
T ss_pred CCcEEEEECCCCCCchHHHHHHHHHh------CCCCEEE--EECCccc------ccCHHHHHHHHHcCCeEEE---EcCH
Confidence 46899999985 333334443322 2 45653 3334321 0123477889999987331 1111
Q ss_pred CcHHHHHHHHhcCCcEEEEecC---------------CCcCChhhhcCCCCceEEEccCC
Q 048078 124 GEDAFLSNLRALQPELCITAAY---------------GNILPSKFLNIPPMGTVNIHPSL 168 (378)
Q Consensus 124 ~~~~~~~~l~~~~~Dliv~~~~---------------~~ilp~~il~~~~~g~iNiHpSl 168 (378)
. +.+ .++|++.+-.| .+.|.+++++..+-.++-+||.+
T Consensus 216 ~-----eav--~~aDvvyt~~~q~er~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~lP 268 (310)
T 3csu_A 216 E-----EVM--AEVDILYMTRVQKERLDPSEYANVKAQFVLRASDLHNAKANMKVLHPLP 268 (310)
T ss_dssp G-----GTT--TTCSEEEECC-----------------CCBCGGGGTTCCTTCEEECCSC
T ss_pred H-----HHh--cCCCEEEECCccccccCHHHHHHHhhccCCCHHHHhhcCCCCEEECCCC
Confidence 0 011 23444444433 35678889988887899999765
No 142
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=59.66 E-value=26 Score=32.29 Aligned_cols=83 Identities=10% Similarity=0.189 Sum_probs=44.3
Q ss_pred CCCCCCCCCceEEEEec-CcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHH-CCCCCceec
Q 048078 41 PSAFSVSRKKPLVFLGS-PQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALD-RGFPADLIF 118 (378)
Q Consensus 41 ~~~~~~~~~~rIvf~Gs-~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~-~gIp~~~v~ 118 (378)
++..+....|+|++.|. +.++..+.+.|++. +++|+++.-.++... +.+.+ .++. ++
T Consensus 12 ~~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~------------~~~~~l~~v~---~~ 70 (330)
T 2pzm_A 12 SGLVPRGSHMRILITGGAGCLGSNLIEHWLPQ------GHEILVIDNFATGKR------------EVLPPVAGLS---VI 70 (330)
T ss_dssp --CCSTTTCCEEEEETTTSHHHHHHHHHHGGG------TCEEEEEECCSSSCG------------GGSCSCTTEE---EE
T ss_pred cCCcccCCCCEEEEECCCCHHHHHHHHHHHHC------CCEEEEEECCCccch------------hhhhccCCce---EE
Confidence 33444455679999996 54566666777764 578876654322210 00000 1232 22
Q ss_pred CCCCCCcH-HHHHHHHhcCCcEEEEecC
Q 048078 119 TPERAGED-AFLSNLRALQPELCITAAY 145 (378)
Q Consensus 119 ~~~~~~~~-~~~~~l~~~~~Dliv~~~~ 145 (378)
. .++.+. .+.+.+++.++|++|-++-
T Consensus 71 ~-~Dl~d~~~~~~~~~~~~~D~vih~A~ 97 (330)
T 2pzm_A 71 E-GSVTDAGLLERAFDSFKPTHVVHSAA 97 (330)
T ss_dssp E-CCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred E-eeCCCHHHHHHHHhhcCCCEEEECCc
Confidence 2 234444 3445565558999887664
No 143
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=59.22 E-value=20 Score=32.78 Aligned_cols=80 Identities=16% Similarity=0.173 Sum_probs=44.0
Q ss_pred CCceEEEEe-cCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHH--HHHCCCCCceecCCCCCC
Q 048078 48 RKKPLVFLG-SPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQY--ALDRGFPADLIFTPERAG 124 (378)
Q Consensus 48 ~~~rIvf~G-s~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~--A~~~gIp~~~v~~~~~~~ 124 (378)
++++|+++| ++.++..+.+.|++. +++|.++.-++.... .+.....+ ....++. +... ++.
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~~~------~~~~~~~l~~~~~~~v~---~v~~-D~~ 66 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSF------SHPTFIYARPLTPDS------TPSSVQLREEFRSMGVT---IIEG-EME 66 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHT------TCCEEEEECCCCTTC------CHHHHHHHHHHHHTTCE---EEEC-CTT
T ss_pred cccEEEEEcCCchhHHHHHHHHHhC------CCcEEEEECCccccc------ChHHHHHHHHhhcCCcE---EEEe-cCC
Confidence 367899999 577888888999885 577765543220100 00011111 1345666 4333 344
Q ss_pred cH-HHHHHHHhcCCcEEEEecC
Q 048078 125 ED-AFLSNLRALQPELCITAAY 145 (378)
Q Consensus 125 ~~-~~~~~l~~~~~Dliv~~~~ 145 (378)
+. .+.+.++ ++|.+|.+.-
T Consensus 67 d~~~l~~a~~--~~d~vi~~a~ 86 (321)
T 3c1o_A 67 EHEKMVSVLK--QVDIVISALP 86 (321)
T ss_dssp CHHHHHHHHT--TCSEEEECCC
T ss_pred CHHHHHHHHc--CCCEEEECCC
Confidence 44 4445553 5898887653
No 144
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=59.09 E-value=16 Score=33.16 Aligned_cols=29 Identities=17% Similarity=0.098 Sum_probs=23.0
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEE
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVA 82 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~ 82 (378)
++|||+|+|.+.++......|.+. +++|.
T Consensus 2 ~~m~i~iiG~G~~G~~~a~~l~~~------g~~V~ 30 (295)
T 1yb4_A 2 NAMKLGFIGLGIMGSPMAINLARA------GHQLH 30 (295)
T ss_dssp --CEEEECCCSTTHHHHHHHHHHT------TCEEE
T ss_pred CCCEEEEEccCHHHHHHHHHHHhC------CCEEE
Confidence 458999999999999998888874 57764
No 145
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=58.97 E-value=13 Score=29.68 Aligned_cols=93 Identities=8% Similarity=0.046 Sum_probs=44.9
Q ss_pred CCCCCCCCCCCCCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCc
Q 048078 36 TSSTTPSAFSVSRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPAD 115 (378)
Q Consensus 36 ~~~~~~~~~~~~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~ 115 (378)
++.+..++.....++||+++..+......|+.+++.. .....+..+.+.. ...+.+.+......
T Consensus 7 ~~~~~~~~~~~~~m~~iLivdd~~~~~~~l~~~L~~~----~~~~~v~~~~~~~------------~al~~l~~~~~dli 70 (150)
T 4e7p_A 7 HHHHSSGLVPRGSHMKVLVAEDQSMLRDAMCQLLTLQ----PDVESVLQAKNGQ------------EAIQLLEKESVDIA 70 (150)
T ss_dssp -------------CEEEEEECSCHHHHHHHHHHHHTS----TTEEEEEEESSHH------------HHHHHHTTSCCSEE
T ss_pred CcccccCCCCCCCccEEEEEcCCHHHHHHHHHHHHhC----CCcEEEEEECCHH------------HHHHHhhccCCCEE
Confidence 3344445555667889999999887778888887742 1223333333221 24455555554422
Q ss_pred eecC--CCCCCcHHHHHHHHhcCCc--EEEEecC
Q 048078 116 LIFT--PERAGEDAFLSNLRALQPE--LCITAAY 145 (378)
Q Consensus 116 ~v~~--~~~~~~~~~~~~l~~~~~D--liv~~~~ 145 (378)
+.. ....+.-++++.|++..++ ++++.+.
T Consensus 71 -i~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~ 103 (150)
T 4e7p_A 71 -ILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTF 103 (150)
T ss_dssp -EECSSCSSSCHHHHHHHHHHTTCSCEEEEEESC
T ss_pred -EEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCC
Confidence 222 1234456777888776554 4444443
No 146
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=58.93 E-value=24 Score=33.95 Aligned_cols=81 Identities=15% Similarity=0.159 Sum_probs=56.3
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
...+|++.|.+.++..+.+.|.+. +.+|+ +++++. ..+.++++++|.. .... ++
T Consensus 172 ~GktV~V~G~G~VG~~~A~~L~~~------GakVv--v~D~~~----------~~l~~~a~~~ga~---~v~~-----~~ 225 (364)
T 1leh_A 172 EGLAVSVQGLGNVAKALCKKLNTE------GAKLV--VTDVNK----------AAVSAAVAEEGAD---AVAP-----NA 225 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT------TCEEE--EECSCH----------HHHHHHHHHHCCE---ECCG-----GG
T ss_pred CcCEEEEECchHHHHHHHHHHHHC------CCEEE--EEcCCH----------HHHHHHHHHcCCE---EECh-----HH
Confidence 357899999999999999988875 67765 555432 3467788887754 2211 11
Q ss_pred HHHHHHhcCCcEEEEecCCCcCChhhhcCCC
Q 048078 128 FLSNLRALQPELCITAAYGNILPSKFLNIPP 158 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~~~~ilp~~il~~~~ 158 (378)
+-..++|+++.+.-..+|..+.++..+
T Consensus 226 ----ll~~~~DIvip~a~~~~I~~~~~~~lg 252 (364)
T 1leh_A 226 ----IYGVTCDIFAPCALGAVLNDFTIPQLK 252 (364)
T ss_dssp ----TTTCCCSEEEECSCSCCBSTTHHHHCC
T ss_pred ----HhccCCcEeeccchHHHhCHHHHHhCC
Confidence 123589999999887788776666543
No 147
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=58.71 E-value=46 Score=31.00 Aligned_cols=18 Identities=17% Similarity=0.353 Sum_probs=13.9
Q ss_pred HHHHHHHhcCCcEEEEec
Q 048078 127 AFLSNLRALQPELCITAA 144 (378)
Q Consensus 127 ~~~~~l~~~~~Dliv~~~ 144 (378)
.+.+.+++++||++++..
T Consensus 105 ~l~~~l~~~~PD~Vv~~~ 122 (391)
T 3tsa_A 105 EYLRLAEAWRPSVLLVDV 122 (391)
T ss_dssp HHHHHHHHHCCSEEEEET
T ss_pred HHHHHHHhcCCCEEEeCc
Confidence 345677888999998864
No 148
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=58.35 E-value=51 Score=30.89 Aligned_cols=31 Identities=13% Similarity=0.226 Sum_probs=22.5
Q ss_pred CceEEEEec-CcchHHHHHHHH-HccCCCCCCceEEEEE
Q 048078 49 KKPLVFLGS-PQVSVNVLDALF-NASSSPDSIFEVAAIV 85 (378)
Q Consensus 49 ~~rIvf~Gs-~~~a~~~L~~L~-~~~~~~~~~~ei~~Vv 85 (378)
.|+|++.|. +.++..+.+.|+ +. +++|+++.
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~------g~~V~~~~ 34 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDT------NHSVVIVD 34 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHC------CCEEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhC------CCEEEEEe
Confidence 479999994 556667778888 64 57877654
No 149
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=57.70 E-value=23 Score=31.98 Aligned_cols=79 Identities=15% Similarity=0.199 Sum_probs=43.7
Q ss_pred CceEEEEe-cCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCC-hHHHH--HHHHCCCCCceecCCCCCC
Q 048078 49 KKPLVFLG-SPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLP-SPVAQ--YALDRGFPADLIFTPERAG 124 (378)
Q Consensus 49 ~~rIvf~G-s~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~-~~v~~--~A~~~gIp~~~v~~~~~~~ 124 (378)
.++|+++| |+.++..+.+.|++. +++|.++.-++... . .+ ..... .....|+. +... ++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~~--~----~~~~~~~~~~~l~~~~v~---~v~~-D~~ 65 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKA------GNPTYALVRKTITA--A----NPETKEELIDNYQSLGVI---LLEG-DIN 65 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHH------TCCEEEEECCSCCS--S----CHHHHHHHHHHHHHTTCE---EEEC-CTT
T ss_pred CcEEEEECCCchHHHHHHHHHHhC------CCcEEEEECCCccc--C----ChHHHHHHHHHHHhCCCE---EEEe-CCC
Confidence 46899999 577888888999886 57776554322110 0 00 11111 11345766 4333 344
Q ss_pred cH-HHHHHHHhcCCcEEEEecC
Q 048078 125 ED-AFLSNLRALQPELCITAAY 145 (378)
Q Consensus 125 ~~-~~~~~l~~~~~Dliv~~~~ 145 (378)
+. .+.+.++ ++|.+|.+.-
T Consensus 66 d~~~l~~~~~--~~d~vi~~a~ 85 (307)
T 2gas_A 66 DHETLVKAIK--QVDIVICAAG 85 (307)
T ss_dssp CHHHHHHHHT--TCSEEEECSS
T ss_pred CHHHHHHHHh--CCCEEEECCc
Confidence 44 4444453 5898887653
No 150
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=57.50 E-value=15 Score=34.55 Aligned_cols=82 Identities=11% Similarity=0.183 Sum_probs=42.2
Q ss_pred ceEEEEe-cCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHH---HHCCCCCceecCCCCCCc
Q 048078 50 KPLVFLG-SPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYA---LDRGFPADLIFTPERAGE 125 (378)
Q Consensus 50 ~rIvf~G-s~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A---~~~gIp~~~v~~~~~~~~ 125 (378)
++|++.| ++.++..+.+.|++. +++|+++.-.++... . ... ..+.+.. ...++. +... ++.+
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~-~-~~~--~~l~~~~~~~~~~~~~---~~~~-Dl~d 90 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEK------GYEVHGIVRRSSSFN-T-GRI--EHLYKNPQAHIEGNMK---LHYG-DLTD 90 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEECCCSSCC-C-TTT--GGGC---------CEE---EEEC-CTTC
T ss_pred cEEEEECCCchHHHHHHHHHHHC------CCEEEEEECCccccc-h-hhH--HHHhhhhccccCCCce---EEEc-cCCC
Confidence 5899999 455666777888875 578776654332210 0 000 0010000 112333 3322 3433
Q ss_pred -HHHHHHHHhcCCcEEEEecC
Q 048078 126 -DAFLSNLRALQPELCITAAY 145 (378)
Q Consensus 126 -~~~~~~l~~~~~Dliv~~~~ 145 (378)
+.+.+.++..++|++|-++.
T Consensus 91 ~~~~~~~~~~~~~d~vih~A~ 111 (375)
T 1t2a_A 91 STCLVKIINEVKPTEIYNLGA 111 (375)
T ss_dssp HHHHHHHHHHHCCSEEEECCS
T ss_pred HHHHHHHHHhcCCCEEEECCC
Confidence 44556666668999887764
No 151
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=57.25 E-value=15 Score=35.63 Aligned_cols=76 Identities=12% Similarity=0.160 Sum_probs=43.9
Q ss_pred ceEEEEecCcchHHHHHHHHHccCCCCCCc-eEEEEEcCCCCCCCCCCccCChHHHHHHHHCC------CCCceecCCCC
Q 048078 50 KPLVFLGSPQVSVNVLDALFNASSSPDSIF-EVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG------FPADLIFTPER 122 (378)
Q Consensus 50 ~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~-ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~g------Ip~~~v~~~~~ 122 (378)
+||+++|.+.++..+.+.|.+.. .+ ..+.|+.. +. ..+.+++++.+ +. ....+-
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g-----~~~~~V~v~~r-~~----------~~~~~la~~l~~~~~~~~~---~~~~D~ 62 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNR-----EVFSHITLASR-TL----------SKCQEIAQSIKAKGYGEID---ITTVDA 62 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCT-----TTCCEEEEEES-CH----------HHHHHHHHHHHHTTCCCCE---EEECCT
T ss_pred CEEEEECCCHHHHHHHHHHHhCC-----CCceEEEEEEC-CH----------HHHHHHHHHhhhhcCCceE---EEEecC
Confidence 58999999888878888887642 22 23334332 21 13455555432 33 222222
Q ss_pred CCcHHHHHHHHhcCCcEEEEec
Q 048078 123 AGEDAFLSNLRALQPELCITAA 144 (378)
Q Consensus 123 ~~~~~~~~~l~~~~~Dliv~~~ 144 (378)
.+.+++.+.+++.++|++|.+.
T Consensus 63 ~d~~~l~~~l~~~~~DvVin~a 84 (405)
T 4ina_A 63 DSIEELVALINEVKPQIVLNIA 84 (405)
T ss_dssp TCHHHHHHHHHHHCCSEEEECS
T ss_pred CCHHHHHHHHHhhCCCEEEECC
Confidence 2335566677777899888765
No 152
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=56.58 E-value=12 Score=33.69 Aligned_cols=33 Identities=12% Similarity=0.184 Sum_probs=25.7
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcC
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQ 87 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~ 87 (378)
.|||++.|++.++..+.+.|++. +++|.++.-.
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~------g~~V~~~~r~ 35 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQ------GHEVTGLRRS 35 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT------TCCEEEEECT
T ss_pred CCcEEEECCCHHHHHHHHHHHHC------CCEEEEEeCC
Confidence 57999999987777888888875 5788776543
No 153
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=56.55 E-value=8 Score=31.39 Aligned_cols=69 Identities=10% Similarity=0.149 Sum_probs=43.2
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHHH
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAF 128 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~~ 128 (378)
..||+++|++..+...++.|.+. +++ +.|+...+ ....++++++++. +...++ +
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~------g~~-v~v~~r~~-----------~~~~~~a~~~~~~---~~~~~~-----~ 74 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYP------QYK-VTVAGRNI-----------DHVRAFAEKYEYE---YVLIND-----I 74 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTT------TCE-EEEEESCH-----------HHHHHHHHHHTCE---EEECSC-----H
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCE-EEEEcCCH-----------HHHHHHHHHhCCc---eEeecC-----H
Confidence 57999999998877777766542 577 55554322 2356788888876 322221 2
Q ss_pred HHHHHhcCCcEEEEecC
Q 048078 129 LSNLRALQPELCITAAY 145 (378)
Q Consensus 129 ~~~l~~~~~Dliv~~~~ 145 (378)
.+.+ .++|++|++.-
T Consensus 75 ~~~~--~~~Divi~at~ 89 (144)
T 3oj0_A 75 DSLI--KNNDVIITATS 89 (144)
T ss_dssp HHHH--HTCSEEEECSC
T ss_pred HHHh--cCCCEEEEeCC
Confidence 2333 36899887753
No 154
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=56.12 E-value=16 Score=33.56 Aligned_cols=23 Identities=17% Similarity=0.427 Sum_probs=20.9
Q ss_pred CceEEEEecCcchHHHHHHHHHc
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNA 71 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~ 71 (378)
++||+|+|.+.++......|.+.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~ 25 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIAN 25 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHT
T ss_pred CCEEEEEcccHHHHHHHHHHHHC
Confidence 58999999999999999999885
No 155
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=56.02 E-value=6.6 Score=34.57 Aligned_cols=38 Identities=18% Similarity=0.320 Sum_probs=23.6
Q ss_pred CCCCCCceEEEEe-cCcchHHHHHHHHHccCCCCCC-ceEEEEEcC
Q 048078 44 FSVSRKKPLVFLG-SPQVSVNVLDALFNASSSPDSI-FEVAAIVTQ 87 (378)
Q Consensus 44 ~~~~~~~rIvf~G-s~~~a~~~L~~L~~~~~~~~~~-~ei~~Vvt~ 87 (378)
..+...++|++.| ++.++..+.+.|++. + ++|+++.-+
T Consensus 18 ~~~~~mk~vlVtGatG~iG~~l~~~L~~~------G~~~V~~~~R~ 57 (236)
T 3qvo_A 18 YFQGHMKNVLILGAGGQIARHVINQLADK------QTIKQTLFARQ 57 (236)
T ss_dssp ----CCEEEEEETTTSHHHHHHHHHHTTC------TTEEEEEEESS
T ss_pred eecCcccEEEEEeCCcHHHHHHHHHHHhC------CCceEEEEEcC
Confidence 3344466899999 566777777888764 4 677666543
No 156
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=55.80 E-value=33 Score=33.16 Aligned_cols=36 Identities=17% Similarity=0.163 Sum_probs=27.8
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCC
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPP 89 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~ 89 (378)
+++||+++|++..+...++++.+. +++++.+-+.++
T Consensus 18 ~~~~ili~g~g~~g~~~~~a~~~~------G~~v~~v~~~~~ 53 (433)
T 2dwc_A 18 SAQKILLLGSGELGKEIAIEAQRL------GVEVVAVDRYAN 53 (433)
T ss_dssp TCCEEEEESCSHHHHHHHHHHHHT------TCEEEEEESSTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC------CCEEEEEECCCC
Confidence 357999999998777788887753 788887776654
No 157
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=54.94 E-value=57 Score=29.59 Aligned_cols=80 Identities=10% Similarity=0.122 Sum_probs=41.8
Q ss_pred CceEEEEecCc-chHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcH-
Q 048078 49 KKPLVFLGSPQ-VSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGED- 126 (378)
Q Consensus 49 ~~rIvf~Gs~~-~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~- 126 (378)
..+|++.|... ++..+.+.|++. +++|+.+.-+.+.. ...+.+..++.|...+ ++. -++.++
T Consensus 47 gk~vlVTGas~GIG~aia~~la~~------G~~V~~~~r~~~~~--------~~~~~~~~~~~~~~~~-~~~-~Dv~d~~ 110 (291)
T 3ijr_A 47 GKNVLITGGDSGIGRAVSIAFAKE------GANIAIAYLDEEGD--------ANETKQYVEKEGVKCV-LLP-GDLSDEQ 110 (291)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESSCHHH--------HHHHHHHHHTTTCCEE-EEE-SCTTSHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC------CCEEEEEeCCchHH--------HHHHHHHHHhcCCcEE-EEE-CCCCCHH
Confidence 35677888544 666677888775 57765544322110 1123445556665533 222 234443
Q ss_pred HHHHHHHhc-----CCcEEEEec
Q 048078 127 AFLSNLRAL-----QPELCITAA 144 (378)
Q Consensus 127 ~~~~~l~~~-----~~Dliv~~~ 144 (378)
++.+.+++. .+|++|..+
T Consensus 111 ~v~~~~~~~~~~~g~iD~lvnnA 133 (291)
T 3ijr_A 111 HCKDIVQETVRQLGSLNILVNNV 133 (291)
T ss_dssp HHHHHHHHHHHHHSSCCEEEECC
T ss_pred HHHHHHHHHHHHcCCCCEEEECC
Confidence 333333322 789988764
No 158
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=54.49 E-value=13 Score=32.17 Aligned_cols=30 Identities=13% Similarity=0.232 Sum_probs=22.1
Q ss_pred ce-EEEEe-cCcchHHHHHHHH-HccCCCCCCceEEEEE
Q 048078 50 KP-LVFLG-SPQVSVNVLDALF-NASSSPDSIFEVAAIV 85 (378)
Q Consensus 50 ~r-Ivf~G-s~~~a~~~L~~L~-~~~~~~~~~~ei~~Vv 85 (378)
|| |++.| ++.++..+.+.|+ +. +++|+++.
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~------g~~V~~~~ 37 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYT------DMHITLYG 37 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHC------CCEEEEEE
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcC------CceEEEEe
Confidence 45 99999 5667777888888 53 67876654
No 159
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=54.49 E-value=31 Score=31.93 Aligned_cols=78 Identities=17% Similarity=0.115 Sum_probs=43.9
Q ss_pred CceEEEEe-cCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHH-HCCCCCceecCCCCCCc-
Q 048078 49 KKPLVFLG-SPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYAL-DRGFPADLIFTPERAGE- 125 (378)
Q Consensus 49 ~~rIvf~G-s~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~-~~gIp~~~v~~~~~~~~- 125 (378)
.++|++.| ++.++..+.+.|++. +++|+++.-.++... .+.+... ..++. +... ++.+
T Consensus 9 ~~~vlVtGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~---------~~~~~~~~~~~~~---~~~~-Dl~d~ 69 (357)
T 1rkx_A 9 GKRVFVTGHTGFKGGWLSLWLQTM------GATVKGYSLTAPTVP---------SLFETARVADGMQ---SEIG-DIRDQ 69 (357)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESSCSSSS---------CHHHHTTTTTTSE---EEEC-CTTCH
T ss_pred CCEEEEECCCchHHHHHHHHHHhC------CCeEEEEeCCCcccc---------hhhHhhccCCceE---EEEc-cccCH
Confidence 47899999 455666677888875 578777654332210 1111111 12333 3322 3444
Q ss_pred HHHHHHHHhcCCcEEEEecC
Q 048078 126 DAFLSNLRALQPELCITAAY 145 (378)
Q Consensus 126 ~~~~~~l~~~~~Dliv~~~~ 145 (378)
+.+.+.++..++|++|-++.
T Consensus 70 ~~~~~~~~~~~~d~vih~A~ 89 (357)
T 1rkx_A 70 NKLLESIREFQPEIVFHMAA 89 (357)
T ss_dssp HHHHHHHHHHCCSEEEECCS
T ss_pred HHHHHHHHhcCCCEEEECCC
Confidence 44455666668999988765
No 160
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=54.28 E-value=36 Score=32.12 Aligned_cols=37 Identities=19% Similarity=0.133 Sum_probs=27.0
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCC
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPS 90 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~ 90 (378)
+++||+++|++..+....+++.+. +++++.+-+.++.
T Consensus 10 ~~~~ili~g~g~~~~~~~~a~~~~------G~~v~~~~~~~~~ 46 (391)
T 1kjq_A 10 AATRVMLLGSGELGKEVAIECQRL------GVEVIAVDRYADA 46 (391)
T ss_dssp TCCEEEEESCSHHHHHHHHHHHTT------TCEEEEEESSTTC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc------CCEEEEEECCCCC
Confidence 468999999987667777776553 6888777665543
No 161
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=54.21 E-value=13 Score=30.94 Aligned_cols=92 Identities=8% Similarity=-0.049 Sum_probs=45.9
Q ss_pred CCCCCCCCCCCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHH--HCCCCCc
Q 048078 38 STTPSAFSVSRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYAL--DRGFPAD 115 (378)
Q Consensus 38 ~~~~~~~~~~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~--~~gIp~~ 115 (378)
.|++...-..++..|+|+|+-.. ...++.|+++.... .+++++.+ ...+.. ..+.++++ +++++-.
T Consensus 12 ~~~~~~~~~~~~~~i~~~G~~~~-~Kg~~~li~a~~~l-~~~~l~i~-G~~~~~---------~~l~~~~~~~~~~l~~~ 79 (177)
T 2f9f_A 12 VETSKFKFKCYGDFWLSVNRIYP-EKRIELQLEVFKKL-QDEKLYIV-GWFSKG---------DHAERYARKIMKIAPDN 79 (177)
T ss_dssp CCCTTCCCCCCCSCEEEECCSSG-GGTHHHHHHHHHHC-TTSCEEEE-BCCCTT---------STHHHHHHHHHHHSCTT
T ss_pred ccccccccCCCCCEEEEEecccc-ccCHHHHHHHHHhC-CCcEEEEE-ecCccH---------HHHHHHHHhhhcccCCc
Confidence 33333334566778999997542 22233333321111 23444333 222211 24778888 7677533
Q ss_pred eecCCCCCCcHHHHHHHHhcCCcEEEEec
Q 048078 116 LIFTPERAGEDAFLSNLRALQPELCITAA 144 (378)
Q Consensus 116 ~v~~~~~~~~~~~~~~l~~~~~Dliv~~~ 144 (378)
+.+ .....++++.+.++. .|++|+.+
T Consensus 80 v~~-~g~~~~~e~~~~~~~--adi~v~ps 105 (177)
T 2f9f_A 80 VKF-LGSVSEEELIDLYSR--CKGLLCTA 105 (177)
T ss_dssp EEE-EESCCHHHHHHHHHH--CSEEEECC
T ss_pred EEE-eCCCCHHHHHHHHHh--CCEEEeCC
Confidence 222 234556677777744 77777544
No 162
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=53.73 E-value=17 Score=31.20 Aligned_cols=32 Identities=34% Similarity=0.508 Sum_probs=22.5
Q ss_pred CceEEEEec-CcchHHHHHHHHHccCCCCCCceEEEEEc
Q 048078 49 KKPLVFLGS-PQVSVNVLDALFNASSSPDSIFEVAAIVT 86 (378)
Q Consensus 49 ~~rIvf~Gs-~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt 86 (378)
.+||++.|. +.++..+.+.|++. +++|.++.-
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~------g~~V~~~~r 36 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNR------GFEVTAVVR 36 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTT------TCEEEEECS
T ss_pred CCEEEEEcCCchHHHHHHHHHHHC------CCEEEEEEc
Confidence 479999994 55666677778764 577766643
No 163
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=52.91 E-value=16 Score=34.17 Aligned_cols=74 Identities=9% Similarity=0.202 Sum_probs=43.4
Q ss_pred CceEEEEe-cCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCC-cH
Q 048078 49 KKPLVFLG-SPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAG-ED 126 (378)
Q Consensus 49 ~~rIvf~G-s~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~-~~ 126 (378)
.+||++.| ++.++..+++.|++. .+++|.++.-.++.. ..+....++. +.. .++. +.
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~-----~g~~V~~~~r~~~~~------------~~~~~~~~v~---~~~-~Dl~~d~ 82 (372)
T 3slg_A 24 AKKVLILGVNGFIGHHLSKRILET-----TDWEVFGMDMQTDRL------------GDLVKHERMH---FFE-GDITINK 82 (372)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHH-----SSCEEEEEESCCTTT------------GGGGGSTTEE---EEE-CCTTTCH
T ss_pred CCEEEEECCCChHHHHHHHHHHhC-----CCCEEEEEeCChhhh------------hhhccCCCeE---EEe-CccCCCH
Confidence 57999999 566777777888875 157887776433221 1222223454 333 3344 44
Q ss_pred HHH-HHHHhcCCcEEEEecC
Q 048078 127 AFL-SNLRALQPELCITAAY 145 (378)
Q Consensus 127 ~~~-~~l~~~~~Dliv~~~~ 145 (378)
+.+ +.++ ++|++|-++.
T Consensus 83 ~~~~~~~~--~~d~Vih~A~ 100 (372)
T 3slg_A 83 EWVEYHVK--KCDVILPLVA 100 (372)
T ss_dssp HHHHHHHH--HCSEEEECBC
T ss_pred HHHHHHhc--cCCEEEEcCc
Confidence 444 4444 6899987654
No 164
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=52.86 E-value=12 Score=32.74 Aligned_cols=36 Identities=22% Similarity=0.206 Sum_probs=23.9
Q ss_pred CCCCCceEEEEec-CcchHHHHHHHHHccCCCCCCceEEEEEc
Q 048078 45 SVSRKKPLVFLGS-PQVSVNVLDALFNASSSPDSIFEVAAIVT 86 (378)
Q Consensus 45 ~~~~~~rIvf~Gs-~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt 86 (378)
..-..|+|++.|. +.++..+.+.|++. +++|+++.-
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~------G~~V~~~~R 53 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKNK------GHEPVAMVR 53 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHT------TCEEEEEES
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHhC------CCeEEEEEC
Confidence 3445789999996 55667777888875 578776653
No 165
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=52.73 E-value=44 Score=30.00 Aligned_cols=79 Identities=8% Similarity=0.137 Sum_probs=43.8
Q ss_pred CceEEEEe-cCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHH--HHHHCCCCCceecCCCCCCc
Q 048078 49 KKPLVFLG-SPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQ--YALDRGFPADLIFTPERAGE 125 (378)
Q Consensus 49 ~~rIvf~G-s~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~--~A~~~gIp~~~v~~~~~~~~ 125 (378)
+++|+++| |+.++..+++.|++. +++|.++ +...... + .+..... .....|+. +... +..+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~------g~~V~~l-~R~~~~~-~----~~~~~~~~~~l~~~~v~---~v~~-D~~d 67 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDL------GHPTFLL-VRESTAS-S----NSEKAQLLESFKASGAN---IVHG-SIDD 67 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT------TCCEEEE-CCCCCTT-T----THHHHHHHHHHHTTTCE---EECC-CTTC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC------CCCEEEE-ECCcccc-c----CHHHHHHHHHHHhCCCE---EEEe-ccCC
Confidence 46899999 577888888999885 5676544 3322110 0 0011111 11245666 4443 3444
Q ss_pred H-HHHHHHHhcCCcEEEEecC
Q 048078 126 D-AFLSNLRALQPELCITAAY 145 (378)
Q Consensus 126 ~-~~~~~l~~~~~Dliv~~~~ 145 (378)
. .+.+.++ ++|.+|.+.-
T Consensus 68 ~~~l~~~~~--~~d~vi~~a~ 86 (308)
T 1qyc_A 68 HASLVEAVK--NVDVVISTVG 86 (308)
T ss_dssp HHHHHHHHH--TCSEEEECCC
T ss_pred HHHHHHHHc--CCCEEEECCc
Confidence 4 4445554 5898887663
No 166
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=52.63 E-value=18 Score=33.80 Aligned_cols=43 Identities=7% Similarity=-0.181 Sum_probs=24.7
Q ss_pred HHHHHHHHhcCCcEEEEecCCCcCChhhhc-CCCC-ceEEEccCC
Q 048078 126 DAFLSNLRALQPELCITAAYGNILPSKFLN-IPPM-GTVNIHPSL 168 (378)
Q Consensus 126 ~~~~~~l~~~~~Dliv~~~~~~ilp~~il~-~~~~-g~iNiHpSl 168 (378)
..+.+.+++.++|++++..+.......++. ..+. -++.+|...
T Consensus 97 ~~l~~~l~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~ 141 (406)
T 2gek_A 97 RKVKKWIAEGDFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTST 141 (406)
T ss_dssp HHHHHHHHHHCCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCC
T ss_pred HHHHHHHHhcCCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcc
Confidence 346677888899999988765433211111 1111 256677753
No 167
>3llu_A RAS-related GTP-binding protein C; structural genomics consortium, SGC, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; HET: GNP; 1.40A {Homo sapiens} PDB: 2q3f_A*
Probab=52.54 E-value=7 Score=33.16 Aligned_cols=36 Identities=11% Similarity=0.163 Sum_probs=16.5
Q ss_pred cCCCCCCCCCCCCCCCCCceEEEEecCcchHHHHHH
Q 048078 32 KGPATSSTTPSAFSVSRKKPLVFLGSPQVSVNVLDA 67 (378)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~rIvf~Gs~~~a~~~L~~ 67 (378)
+|+++++..+.+.++.+.+||+++|.+..+-++|-.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~ki~~vG~~~vGKTsLi~ 38 (196)
T 3llu_A 3 HHHHHSSGRENLYFQGSKPRILLMGLRRSGKSSIQK 38 (196)
T ss_dssp -----------------CCEEEEEESTTSSHHHHHH
T ss_pred ccccccCCCCCCcccCcceEEEEECCCCCCHHHHHH
Confidence 466777788888888999999999999888888744
No 168
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=52.24 E-value=26 Score=32.47 Aligned_cols=31 Identities=23% Similarity=0.186 Sum_probs=25.2
Q ss_pred CCCCceEEEEecCcchHHHHHHHHHccCCCCCCceEE
Q 048078 46 VSRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVA 82 (378)
Q Consensus 46 ~~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~ 82 (378)
....|||+|+|.+.++......|.+. +++|.
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~------G~~V~ 48 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKN------GFKVT 48 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHT------TCEEE
T ss_pred cccCCEEEEECccHHHHHHHHHHHHC------CCeEE
Confidence 34468999999999999999999875 57654
No 169
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=52.22 E-value=43 Score=25.53 Aligned_cols=79 Identities=16% Similarity=0.097 Sum_probs=48.0
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecC--CCCCCcH
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFT--PERAGED 126 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~--~~~~~~~ 126 (378)
++||+++..+......|+.+++.. +++++..+++... ..+.+++...... +.. ....+.-
T Consensus 1 ~~~ilivdd~~~~~~~l~~~L~~~-----g~~v~~~~~~~~~------------a~~~~~~~~~dli-i~d~~l~~~~g~ 62 (134)
T 3f6c_A 1 SLNAIIIDDHPLAIAAIRNLLIKN-----DIEILAELTEGGS------------AVQRVETLKPDIV-IIDVDIPGVNGI 62 (134)
T ss_dssp CEEEEEECCCHHHHHHHHHHHHHT-----TEEEEEEESSSTT------------HHHHHHHHCCSEE-EEETTCSSSCHH
T ss_pred CeEEEEEcCCHHHHHHHHHHHhhC-----CcEEEEEcCCHHH------------HHHHHHhcCCCEE-EEecCCCCCChH
Confidence 478999998877778888887752 5776655555433 3455555554432 221 2334556
Q ss_pred HHHHHHHhcCCc--EEEEecC
Q 048078 127 AFLSNLRALQPE--LCITAAY 145 (378)
Q Consensus 127 ~~~~~l~~~~~D--liv~~~~ 145 (378)
++++.+++..++ ++++.+.
T Consensus 63 ~~~~~l~~~~~~~~ii~~s~~ 83 (134)
T 3f6c_A 63 QVLETLRKRQYSGIIIIVSAK 83 (134)
T ss_dssp HHHHHHHHTTCCSEEEEEECC
T ss_pred HHHHHHHhcCCCCeEEEEeCC
Confidence 778888877665 4444443
No 170
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=52.17 E-value=23 Score=31.99 Aligned_cols=78 Identities=12% Similarity=0.155 Sum_probs=43.8
Q ss_pred CceEEEEe-cCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHH--HHHCCCCCceecCCCCCCc
Q 048078 49 KKPLVFLG-SPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQY--ALDRGFPADLIFTPERAGE 125 (378)
Q Consensus 49 ~~rIvf~G-s~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~--A~~~gIp~~~v~~~~~~~~ 125 (378)
+++|+++| |+.++..+++.|++. +++|.++.-++... .+.....+ ....|+. +... ++.+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~~-------~~~~~~~~~~~~~~~~~---~~~~-D~~d 66 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISL------GHPTYVLFRPEVVS-------NIDKVQMLLYFKQLGAK---LIEA-SLDD 66 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT------TCCEEEECCSCCSS-------CHHHHHHHHHHHTTTCE---EECC-CSSC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC------CCcEEEEECCCccc-------chhHHHHHHHHHhCCeE---EEeC-CCCC
Confidence 57899999 677888888999885 57776543222110 00111111 1235665 4433 3444
Q ss_pred H-HHHHHHHhcCCcEEEEecC
Q 048078 126 D-AFLSNLRALQPELCITAAY 145 (378)
Q Consensus 126 ~-~~~~~l~~~~~Dliv~~~~ 145 (378)
. .+.+.++ ++|.+|.+.-
T Consensus 67 ~~~l~~~~~--~~d~vi~~a~ 85 (313)
T 1qyd_A 67 HQRLVDALK--QVDVVISALA 85 (313)
T ss_dssp HHHHHHHHT--TCSEEEECCC
T ss_pred HHHHHHHHh--CCCEEEECCc
Confidence 4 4445553 5898887653
No 171
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=51.80 E-value=14 Score=31.84 Aligned_cols=32 Identities=16% Similarity=0.289 Sum_probs=23.0
Q ss_pred ceEEEEe-cCcchHHHHHHHHHccCCCCCCceEEEEEcC
Q 048078 50 KPLVFLG-SPQVSVNVLDALFNASSSPDSIFEVAAIVTQ 87 (378)
Q Consensus 50 ~rIvf~G-s~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~ 87 (378)
|||++.| ++.++..+.+.|++. +++|.++.-+
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~------g~~V~~~~R~ 33 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTT------DYQIYAGARK 33 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTS------SCEEEEEESS
T ss_pred CeEEEECCCCHHHHHHHHHHHHC------CCEEEEEECC
Confidence 6899999 565666677777764 5888776533
No 172
>2cwd_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, structural genomics; 1.90A {Thermus thermophilus}
Probab=51.09 E-value=75 Score=26.52 Aligned_cols=86 Identities=13% Similarity=0.146 Sum_probs=47.4
Q ss_pred CCceEEEEecCcchHH-----HHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCC
Q 048078 48 RKKPLVFLGSPQVSVN-----VLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPER 122 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~-----~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~ 122 (378)
+++||+|+-+++..-+ .|+.++..... ...++|..-=|.+.. . |.. ......+.++++||+.. ..+..
T Consensus 3 ~~~~VLFVC~gN~cRSpmAEal~~~~~~~~gl-~~~~~v~SAGt~~~~-~--g~~-~~p~a~~~l~e~Gid~s--~~ar~ 75 (161)
T 2cwd_A 3 RPVRVLFVCLGNICRSPMAEGIFRKLLKERGL-EDRFEVDSAGTGAWH-V--GEP-MDPRARRVLEEEGAYFP--HVARR 75 (161)
T ss_dssp CCEEEEEEESSSSSHHHHHHHHHHHHHHHHTC-TTTEEEEEEESSCTT-T--TCC-CCHHHHHHHHHHTCCCC--CCCCB
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHHHHHHcCC-CCcEEEEecccCCCc-c--CCC-CCHHHHHHHHHcCcCcc--ccccC
Confidence 5789999998885443 44444432110 013555433333311 0 111 23456778889999943 44555
Q ss_pred CCcHHHHHHHHhcCCcEEEEecCC
Q 048078 123 AGEDAFLSNLRALQPELCITAAYG 146 (378)
Q Consensus 123 ~~~~~~~~~l~~~~~Dliv~~~~~ 146 (378)
+..+.+ ..+|+||++.-.
T Consensus 76 l~~~~~------~~~DlIi~M~~~ 93 (161)
T 2cwd_A 76 LTREDV------LAYDHILVMDRE 93 (161)
T ss_dssp CCHHHH------HHCSEEEESSHH
T ss_pred CCHhHh------ccCCEEEECChH
Confidence 554332 258999998753
No 173
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=51.03 E-value=13 Score=34.94 Aligned_cols=36 Identities=8% Similarity=0.166 Sum_probs=29.2
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCC
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQP 88 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~ 88 (378)
+++||+++|.+.++...++.|.+. .++++++|+...
T Consensus 2 ~~irV~IiG~G~mG~~~~~~l~~~-----~~~elvav~d~~ 37 (320)
T 1f06_A 2 TNIRVAIVGYGNLGRSVEKLIAKQ-----PDMDLVGIFSRR 37 (320)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTC-----SSEEEEEEEESS
T ss_pred CCCEEEEEeecHHHHHHHHHHhcC-----CCCEEEEEEcCC
Confidence 479999999999988888888764 268999888644
No 174
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=50.46 E-value=32 Score=31.17 Aligned_cols=69 Identities=7% Similarity=0.057 Sum_probs=40.0
Q ss_pred CceEEEEe-cCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 49 KKPLVFLG-SPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 49 ~~rIvf~G-s~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
.+||++.| ++.++..+++.|++. +++|.++.-.++. .++. ++. +... ++..+.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~-------------~~~~---~~~---~~~~-Dl~~~~ 55 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKND------GNTPIILTRSIGN-------------KAIN---DYE---YRVS-DYTLED 55 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESCCC---------------------CCE---EEEC-CCCHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhC------CCEEEEEeCCCCc-------------ccCC---ceE---EEEc-cccHHH
Confidence 47999999 566677777888875 5787766543211 0111 555 3332 333334
Q ss_pred HHHHHHhcCCcEEEEecC
Q 048078 128 FLSNLRALQPELCITAAY 145 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~~ 145 (378)
+.+.++ ++|++|-++.
T Consensus 56 ~~~~~~--~~d~Vih~a~ 71 (311)
T 3m2p_A 56 LINQLN--DVDAVVHLAA 71 (311)
T ss_dssp HHHHTT--TCSEEEECCC
T ss_pred HHHhhc--CCCEEEEccc
Confidence 444443 7898887664
No 175
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=50.30 E-value=87 Score=28.36 Aligned_cols=42 Identities=17% Similarity=0.090 Sum_probs=26.0
Q ss_pred HHHHHHHHhcCCcEEEEecCCCcCChhhhcCCCCceEEEccCCC
Q 048078 126 DAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLL 169 (378)
Q Consensus 126 ~~~~~~l~~~~~Dliv~~~~~~ilp~~il~~~~~g~iNiHpSlL 169 (378)
..+.+.+++.++|++++.++...+.. ....+..++.+|....
T Consensus 74 ~~l~~~l~~~~~Dvi~~~~~~~~~~~--~~~~~~pv~~~h~~~~ 115 (342)
T 2iuy_A 74 EEIERWLRTADVDVVHDHSGGVIGPA--GLPPGTAFISSHHFTT 115 (342)
T ss_dssp HHHHHHHHHCCCSEEEECSSSSSCST--TCCTTCEEEEEECSSS
T ss_pred HHHHHHHHhcCCCEEEECCchhhHHH--HhhcCCCEEEecCCCC
Confidence 36678888899999998876433322 1111112777787753
No 176
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=49.82 E-value=43 Score=31.78 Aligned_cols=40 Identities=10% Similarity=0.061 Sum_probs=21.4
Q ss_pred HHHHHhcCCcEEEEecCCCcCChhhhcCCCCceEEEccCCC
Q 048078 129 LSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLL 169 (378)
Q Consensus 129 ~~~l~~~~~Dliv~~~~~~ilp~~il~~~~~g~iNiHpSlL 169 (378)
.+.+++.+||++|+-.+.. ....+-+.....++.++++..
T Consensus 102 ~~~l~~~~pD~VI~d~~~~-~~~~~A~~lgIP~v~~~~~~~ 141 (424)
T 2iya_A 102 EDAYADDRPDLIVYDIASW-PAPVLGRKWDIPFVQLSPTFV 141 (424)
T ss_dssp HHHTTTSCCSEEEEETTCT-HHHHHHHHHTCCEEEEESSCC
T ss_pred HHHHhccCCCEEEEcCccc-HHHHHHHhcCCCEEEEecccc
Confidence 3445567899999877531 111222222334666666543
No 177
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=49.38 E-value=19 Score=33.81 Aligned_cols=81 Identities=11% Similarity=0.135 Sum_probs=41.6
Q ss_pred ceEEEEec-CcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCC-CCCCccCChHHHHHHH--HC-CCCCceecCCCCCC
Q 048078 50 KPLVFLGS-PQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRR-DRGRKVLPSPVAQYAL--DR-GFPADLIFTPERAG 124 (378)
Q Consensus 50 ~rIvf~Gs-~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~-grg~~~~~~~v~~~A~--~~-gIp~~~v~~~~~~~ 124 (378)
++|++.|. +.++..+.+.|++. +++|+++.-.++... .+-.. +..... .. ++. +... ++.
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~------g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~~~~~~---~~~~-Dl~ 93 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGK------GYEVHGLIRRSSNFNTQRINH-----IYIDPHNVNKALMK---LHYA-DLT 93 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEECCCSSCCCTTTTT-----TC--------CCEE---EEEC-CTT
T ss_pred CeEEEEcCCchHHHHHHHHHHHC------CCEEEEEecCCccccchhhhh-----hhhccccccccceE---EEEC-CCC
Confidence 48999996 55666677888874 578776654332210 00000 000000 01 333 2222 333
Q ss_pred c-HHHHHHHHhcCCcEEEEecC
Q 048078 125 E-DAFLSNLRALQPELCITAAY 145 (378)
Q Consensus 125 ~-~~~~~~l~~~~~Dliv~~~~ 145 (378)
+ +.+.+.++...+|++|-++.
T Consensus 94 d~~~~~~~~~~~~~d~Vih~A~ 115 (381)
T 1n7h_A 94 DASSLRRWIDVIKPDEVYNLAA 115 (381)
T ss_dssp CHHHHHHHHHHHCCSEEEECCS
T ss_pred CHHHHHHHHHhcCCCEEEECCc
Confidence 3 44556666668999987664
No 178
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=49.21 E-value=39 Score=30.88 Aligned_cols=79 Identities=9% Similarity=0.090 Sum_probs=42.7
Q ss_pred ceEEEEe-cCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCc-HH
Q 048078 50 KPLVFLG-SPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGE-DA 127 (378)
Q Consensus 50 ~rIvf~G-s~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~-~~ 127 (378)
|+|++.| ++.++..+.+.|++. +++|+++.-...... ...+..+....++. ++.. ++.+ +.
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~-------~~~~~~l~~~~~~~---~~~~-Dl~d~~~ 64 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQ------GIDLIVFDNLSRKGA-------TDNLHWLSSLGNFE---FVHG-DIRNKND 64 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEECCCSTTH-------HHHHHHHHTTCCCE---EEEC-CTTCHHH
T ss_pred cEEEEeCCCchhHHHHHHHHHhC------CCEEEEEeCCCccCc-------hhhhhhhccCCceE---EEEc-CCCCHHH
Confidence 5899999 565667777888874 578776642211100 00112222111243 3332 3444 34
Q ss_pred HHHHHHhcCCcEEEEecC
Q 048078 128 FLSNLRALQPELCITAAY 145 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~~ 145 (378)
+.+.++..++|++|-++-
T Consensus 65 ~~~~~~~~~~d~vih~A~ 82 (347)
T 1orr_A 65 VTRLITKYMPDSCFHLAG 82 (347)
T ss_dssp HHHHHHHHCCSEEEECCC
T ss_pred HHHHHhccCCCEEEECCc
Confidence 555666667999987764
No 179
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=49.03 E-value=26 Score=32.18 Aligned_cols=30 Identities=10% Similarity=0.055 Sum_probs=24.1
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEE
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAI 84 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~V 84 (378)
++||+|+|.+.++......|.+. +++|.++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~------G~~V~~~ 44 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEW------PGGVTVY 44 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTS------TTCEEEE
T ss_pred CCeEEEECcCHHHHHHHHHHHHC------CCeEEEE
Confidence 57999999999999988888765 5776543
No 180
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=48.92 E-value=23 Score=30.00 Aligned_cols=31 Identities=26% Similarity=0.326 Sum_probs=23.5
Q ss_pred ceEEEEe-cCcchHHHHHHHHHccCCCCCCceEEEEEc
Q 048078 50 KPLVFLG-SPQVSVNVLDALFNASSSPDSIFEVAAIVT 86 (378)
Q Consensus 50 ~rIvf~G-s~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt 86 (378)
|||+++| |+.++..+.+.|++. +++|.++.-
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~------g~~V~~~~R 32 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNR------GHEVTAIVR 32 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEES
T ss_pred CeEEEEcCCchhHHHHHHHHHhC------CCEEEEEEc
Confidence 7899999 566777788888875 578776643
No 181
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=48.91 E-value=27 Score=34.74 Aligned_cols=74 Identities=19% Similarity=0.221 Sum_probs=43.3
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHHH
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAF 128 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~~ 128 (378)
.+||+++|++..+..+++.|.+.. +++| .|+. ++. ....+++++.++. ....+-.+.+++
T Consensus 23 ~k~VlIiGAGgiG~aia~~L~~~~-----g~~V-~v~~-R~~----------~ka~~la~~~~~~---~~~~D~~d~~~l 82 (467)
T 2axq_A 23 GKNVLLLGSGFVAQPVIDTLAAND-----DINV-TVAC-RTL----------ANAQALAKPSGSK---AISLDVTDDSAL 82 (467)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTST-----TEEE-EEEE-SSH----------HHHHHHHGGGTCE---EEECCTTCHHHH
T ss_pred CCEEEEECChHHHHHHHHHHHhCC-----CCeE-EEEE-CCH----------HHHHHHHHhcCCc---EEEEecCCHHHH
Confidence 568999999988888989988641 4554 3333 321 2345566555554 222121122344
Q ss_pred HHHHHhcCCcEEEEec
Q 048078 129 LSNLRALQPELCITAA 144 (378)
Q Consensus 129 ~~~l~~~~~Dliv~~~ 144 (378)
.+.++ ++|++|.+.
T Consensus 83 ~~~l~--~~DvVIn~t 96 (467)
T 2axq_A 83 DKVLA--DNDVVISLI 96 (467)
T ss_dssp HHHHH--TSSEEEECS
T ss_pred HHHHc--CCCEEEECC
Confidence 44553 689988775
No 182
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=48.15 E-value=1e+02 Score=29.33 Aligned_cols=109 Identities=18% Similarity=0.193 Sum_probs=66.7
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCce-EEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcH
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFE-VAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGED 126 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~e-i~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~ 126 (378)
..++|+|+|.+.++..+.+.|... +++ |.+ + ++... + .+.+.+.|+. .. .+
T Consensus 163 ~g~tvgIIG~G~IG~~vA~~l~~~------G~~~V~~-~-d~~~~----------~-~~~~~~~g~~---~~--~~---- 214 (364)
T 2j6i_A 163 EGKTIATIGAGRIGYRVLERLVPF------NPKELLY-Y-DYQAL----------P-KDAEEKVGAR---RV--EN---- 214 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGG------CCSEEEE-E-CSSCC----------C-HHHHHHTTEE---EC--SS----
T ss_pred CCCEEEEECcCHHHHHHHHHHHhC------CCcEEEE-E-CCCcc----------c-hhHHHhcCcE---ec--CC----
Confidence 356899999999999888887653 565 543 3 32211 0 2456677755 21 11
Q ss_pred HHHHHHHhcCCcEEEEecCC-----CcCChhhhcCCCCceEEEccCCCCCCCCc----hHHHHHHHcCCcEEEEEE
Q 048078 127 AFLSNLRALQPELCITAAYG-----NILPSKFLNIPPMGTVNIHPSLLPLYRGA----APVQRALQGGAKETGVSL 193 (378)
Q Consensus 127 ~~~~~l~~~~~Dliv~~~~~-----~ilp~~il~~~~~g~iNiHpSlLP~yRG~----~pi~wai~~g~~~tGvTi 193 (378)
+.+.++ +.|++++.--. ++|..+.++..+.+.+=+--| ||. ..+..|+.+|. -.|+-+
T Consensus 215 -l~ell~--~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIn~a-----rG~~vd~~aL~~aL~~g~-i~gA~L 281 (364)
T 2j6i_A 215 -IEELVA--QADIVTVNAPLHAGTKGLINKELLSKFKKGAWLVNTA-----RGAICVAEDVAAALESGQ-LRGYGG 281 (364)
T ss_dssp -HHHHHH--TCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECS-----CGGGBCHHHHHHHHHHTS-EEEEEE
T ss_pred -HHHHHh--cCCEEEECCCCChHHHHHhCHHHHhhCCCCCEEEECC-----CCchhCHHHHHHHHHcCC-CcEEEE
Confidence 223332 68999887543 678888888777664333333 564 56788888875 444433
No 183
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=47.68 E-value=70 Score=28.63 Aligned_cols=74 Identities=15% Similarity=0.215 Sum_probs=42.5
Q ss_pred CceEEEEec-CcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 49 KKPLVFLGS-PQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 49 ~~rIvf~Gs-~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
+++|++.|. +.++..+.+.|++.. +++|.++.-++++. .... ....|+. +... ++.+.+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g-----~~~V~~~~R~~~~~----------~~~~-l~~~~~~---~~~~-D~~d~~ 64 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDG-----TFKVRVVTRNPRKK----------AAKE-LRLQGAE---VVQG-DQDDQV 64 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHC-----SSEEEEEESCTTSH----------HHHH-HHHTTCE---EEEC-CTTCHH
T ss_pred CCEEEEECCCchHHHHHHHHHHhcC-----CceEEEEEcCCCCH----------HHHH-HHHCCCE---EEEe-cCCCHH
Confidence 478999995 667777888888751 27777665333221 1122 2345665 3332 344444
Q ss_pred -HHHHHHhcCCcEEEEec
Q 048078 128 -FLSNLRALQPELCITAA 144 (378)
Q Consensus 128 -~~~~l~~~~~Dliv~~~ 144 (378)
+.+.++ ++|.+|.+.
T Consensus 65 ~l~~~~~--~~d~vi~~a 80 (299)
T 2wm3_A 65 IMELALN--GAYATFIVT 80 (299)
T ss_dssp HHHHHHT--TCSEEEECC
T ss_pred HHHHHHh--cCCEEEEeC
Confidence 334443 589888765
No 184
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=47.54 E-value=41 Score=30.45 Aligned_cols=95 Identities=13% Similarity=0.052 Sum_probs=42.1
Q ss_pred eeeEeeecCCCCCCCCCCCCCCCCCceEEEEecC-cchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHH
Q 048078 25 IRRFFCFKGPATSSTTPSAFSVSRKKPLVFLGSP-QVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPV 103 (378)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~rIvf~Gs~-~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v 103 (378)
+-++|..+||.+-.. ..-...++++.|.. .++..+.+.|.+. +++|+.+- ++. ..+
T Consensus 10 ~~~~~~~~g~~sm~~-----~~l~gk~vlVTGas~gIG~aia~~la~~------G~~V~~~~--r~~----------~~~ 66 (277)
T 3gvc_A 10 GTLEAQTQGPGSMNH-----PDLAGKVAIVTGAGAGIGLAVARRLADE------GCHVLCAD--IDG----------DAA 66 (277)
T ss_dssp ----------------------CTTCEEEETTTTSTHHHHHHHHHHHT------TCEEEEEE--SSH----------HHH
T ss_pred CChhhccCCCCCCCc-----cCCCCCEEEEECCCcHHHHHHHHHHHHC------CCEEEEEe--CCH----------HHH
Confidence 444566666654322 12234567777744 4666777888775 57765443 221 235
Q ss_pred HHHHHHCCCCCceecCCCCCCcH-HHHHHHHhc-----CCcEEEEec
Q 048078 104 AQYALDRGFPADLIFTPERAGED-AFLSNLRAL-----QPELCITAA 144 (378)
Q Consensus 104 ~~~A~~~gIp~~~v~~~~~~~~~-~~~~~l~~~-----~~Dliv~~~ 144 (378)
.+.+++.+-... .+. -++.++ ++.+.+++. .+|++|..+
T Consensus 67 ~~~~~~~~~~~~-~~~-~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnA 111 (277)
T 3gvc_A 67 DAAATKIGCGAA-ACR-VDVSDEQQIIAMVDACVAAFGGVDKLVANA 111 (277)
T ss_dssp HHHHHHHCSSCE-EEE-CCTTCHHHHHHHHHHHHHHHSSCCEEEECC
T ss_pred HHHHHHcCCcce-EEE-ecCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 566666655433 222 234443 333333322 799988765
No 185
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=47.30 E-value=64 Score=29.50 Aligned_cols=87 Identities=14% Similarity=0.075 Sum_probs=44.2
Q ss_pred CceEEEEe-cCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcH-
Q 048078 49 KKPLVFLG-SPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGED- 126 (378)
Q Consensus 49 ~~rIvf~G-s~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~- 126 (378)
.++|++.| ++.++..+.+.|++. +++|+++.-.+.. .|........+.++....+-.++ +.. -++.+.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~--~r~~~~~~~~~~~l~~~~~~~~~-~~~-~D~~~~~ 71 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEA------GYLPVVIDNFHNA--FRGGGSLPESLRRVQELTGRSVE-FEE-MDILDQG 71 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHT------TCCEEEEECSSSS--CBCSSSSBHHHHHHHHHHTCCCE-EEE-CCTTCHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC------CCEEEEEecCCcc--cccccccHHHHHHHHhccCCceE-EEE-CCCCCHH
Confidence 46899998 455666677888875 5777765422211 00000011223333322222222 332 234444
Q ss_pred HHHHHHHhcCCcEEEEecC
Q 048078 127 AFLSNLRALQPELCITAAY 145 (378)
Q Consensus 127 ~~~~~l~~~~~Dliv~~~~ 145 (378)
.+.+.+++.++|++|-++.
T Consensus 72 ~~~~~~~~~~~d~vih~A~ 90 (348)
T 1ek6_A 72 ALQRLFKKYSFMAVIHFAG 90 (348)
T ss_dssp HHHHHHHHCCEEEEEECCS
T ss_pred HHHHHHHhcCCCEEEECCC
Confidence 4445565568999887664
No 186
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=47.26 E-value=28 Score=27.99 Aligned_cols=81 Identities=12% Similarity=0.053 Sum_probs=42.9
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHHH
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAF 128 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~~ 128 (378)
+.+|+|+|.-.. ...++.|+++...-...-++..++..... ....+.++++++++. +.- .....+++
T Consensus 2 ~~~i~~~G~~~~-~Kg~~~li~a~~~l~~~~~~~l~i~G~g~--------~~~~~~~~~~~~~~~---v~~-g~~~~~~~ 68 (166)
T 3qhp_A 2 PFKIAMVGRYSN-EKNQSVLIKAVALSKYKQDIVLLLKGKGP--------DEKKIKLLAQKLGVK---AEF-GFVNSNEL 68 (166)
T ss_dssp CEEEEEESCCST-TTTHHHHHHHHHTCTTGGGEEEEEECCST--------THHHHHHHHHHHTCE---EEC-CCCCHHHH
T ss_pred ceEEEEEeccch-hcCHHHHHHHHHHhccCCCeEEEEEeCCc--------cHHHHHHHHHHcCCe---EEE-eecCHHHH
Confidence 678999997542 22223333321111111244444443211 124678889999884 333 45556667
Q ss_pred HHHHHhcCCcEEEEec
Q 048078 129 LSNLRALQPELCITAA 144 (378)
Q Consensus 129 ~~~l~~~~~Dliv~~~ 144 (378)
.+.+ ...|++|..+
T Consensus 69 ~~~~--~~adv~v~ps 82 (166)
T 3qhp_A 69 LEIL--KTCTLYVHAA 82 (166)
T ss_dssp HHHH--TTCSEEEECC
T ss_pred HHHH--HhCCEEEECC
Confidence 6666 3578887644
No 187
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=47.18 E-value=27 Score=31.73 Aligned_cols=27 Identities=15% Similarity=0.228 Sum_probs=22.2
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceE
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEV 81 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei 81 (378)
+|||+|+|.+.++......|.+. +++|
T Consensus 5 ~m~i~iiG~G~~G~~~a~~l~~~------g~~V 31 (299)
T 1vpd_A 5 TMKVGFIGLGIMGKPMSKNLLKA------GYSL 31 (299)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHT------TCEE
T ss_pred cceEEEECchHHHHHHHHHHHhC------CCEE
Confidence 47999999999999988888774 5675
No 188
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=47.16 E-value=41 Score=32.50 Aligned_cols=102 Identities=15% Similarity=0.195 Sum_probs=55.7
Q ss_pred CCCceEEEEecCc--chHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCcc-CChHH----HHHHHHCCCCCceecC
Q 048078 47 SRKKPLVFLGSPQ--VSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKV-LPSPV----AQYALDRGFPADLIFT 119 (378)
Q Consensus 47 ~~~~rIvf~Gs~~--~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~-~~~~v----~~~A~~~gIp~~~v~~ 119 (378)
-..+||+|+|-.. .+-+.+..+-. .++++. ++.|+.. .+ .+..+ +++|++.|..+. +.
T Consensus 178 l~glkva~vGD~~nnva~Sl~~~~~~------lG~~v~--~~~P~~~-----~p~~~~~~~~~~~~~~~~~g~~i~-~~- 242 (365)
T 4amu_A 178 LKNKKIVFIGDYKNNVGVSTMIGAAF------NGMHVV--MCGPDNY-----KNEIDKNVLAKCIELFKRNGGSLR-FS- 242 (365)
T ss_dssp CTTCEEEEESSTTSHHHHHHHHHHHH------TTCEEE--EESCGGG-----GGGSCHHHHHHHHHHHHHHSCEEE-EE-
T ss_pred CCCCEEEEECCCCcchHHHHHHHHHH------cCCEEE--EECCccc-----cCCCcHHHHHHHHHHHHHcCCEEE-EE-
Confidence 3578999999863 22333333322 256643 3334321 11 01223 345677786632 21
Q ss_pred CCCCCcHHHHHHHHhcCCcEEEEecC------------------CCcCChhhhcCCCCceEEEccCCCCCCC
Q 048078 120 PERAGEDAFLSNLRALQPELCITAAY------------------GNILPSKFLNIPPMGTVNIHPSLLPLYR 173 (378)
Q Consensus 120 ~~~~~~~~~~~~l~~~~~Dliv~~~~------------------~~ilp~~il~~~~~g~iNiHpSlLP~yR 173 (378)
.+ +.+.+ .++|++.+-.| .+.|..++++..+-.++-+|| ||.+|
T Consensus 243 -~d-----~~eav--~~aDVVytd~W~smg~~~~~~~er~~~~~~y~vt~ell~~a~~dai~MHc--LP~~R 304 (365)
T 4amu_A 243 -TD-----KILAA--QDADVIYTDVWVSLGEPFELFDKRIGELKNFQVDMNMIKAAKNDVIFLHC--LPAFH 304 (365)
T ss_dssp -SC-----HHHHT--TTCSEEEECCSCCTTCCHHHHHHHHHHHTTCCBCHHHHHHSCTTCEEEEC--SCCCC
T ss_pred -CC-----HHHHh--cCCCEEEecccccCCchhhhHHHHHHHhcccccCHHHHHhcCCCcEEECC--CCCCC
Confidence 11 11222 36787776322 245777888777777999998 58888
No 189
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=46.85 E-value=27 Score=30.87 Aligned_cols=32 Identities=22% Similarity=0.203 Sum_probs=26.1
Q ss_pred ceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcC
Q 048078 50 KPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQ 87 (378)
Q Consensus 50 ~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~ 87 (378)
|||+|+|.+..+....+.|.+. ++++++|+..
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~------g~~lv~v~d~ 32 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERN------GFEIAAILDV 32 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHhcC------CCEEEEEEec
Confidence 6999999999999988888742 6888887643
No 190
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=46.44 E-value=79 Score=30.40 Aligned_cols=58 Identities=21% Similarity=0.263 Sum_probs=36.3
Q ss_pred HHHHHHCCCCCceecCCCCCCcHHHHHHHHhcCCcEEEEecCC--------------------CcCChhhhcCCCCceEE
Q 048078 104 AQYALDRGFPADLIFTPERAGEDAFLSNLRALQPELCITAAYG--------------------NILPSKFLNIPPMGTVN 163 (378)
Q Consensus 104 ~~~A~~~gIp~~~v~~~~~~~~~~~~~~l~~~~~Dliv~~~~~--------------------~ilp~~il~~~~~g~iN 163 (378)
+++|++.|..+. +. .+ +.+.+ .++|++.+-.|. +.|..++++..+ .++-
T Consensus 243 ~~~a~~~g~~v~-~~--~d-----~~eav--~~aDvVyt~~w~se~~mg~~~~~~~~~~~~~~y~vt~e~l~~a~-~ai~ 311 (359)
T 1zq6_A 243 AQNVAESGGSLQ-VS--HD-----IDSAY--AGADVVYAKSWGALPFFGNWEPEKPIRDQYQHFIVDERKMALTN-NGVF 311 (359)
T ss_dssp HHHHHHHSCEEE-EE--CC-----HHHHH--TTCSEEEEECCCCGGGTTCCTTHHHHHGGGGGGSBCHHHHHTSS-SCEE
T ss_pred HHHHHHcCCeEE-EE--CC-----HHHHh--cCCCEEEECCccccccCCcchhhHHHHHHhcCCCCCHHHHHhCC-CCEE
Confidence 345557787733 21 11 12333 468988887763 235666677777 8999
Q ss_pred EccCCCCCCCC
Q 048078 164 IHPSLLPLYRG 174 (378)
Q Consensus 164 iHpSlLP~yRG 174 (378)
+|| ||.+||
T Consensus 312 MHc--LP~~Rg 320 (359)
T 1zq6_A 312 SHC--LPLRRN 320 (359)
T ss_dssp ECC--SCCCBT
T ss_pred ECC--CCCCCC
Confidence 998 578887
No 191
>1jf8_A Arsenate reductase; ptpase I fold, P-loop, sulfinic acid, oxidoreductase; 1.12A {Staphylococcus aureus} SCOP: c.44.1.1 PDB: 1jfv_A 2fxi_A 1lju_A* 1rxi_A 1rxe_A 1ljl_A 2cd7_A 1lk0_A
Probab=45.80 E-value=1.1e+02 Score=24.47 Aligned_cols=79 Identities=11% Similarity=0.110 Sum_probs=45.8
Q ss_pred CceEEEEecCcchHHHH-HHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 49 KKPLVFLGSPQVSVNVL-DALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L-~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
++||+|+=+++..-+-+ ++|++.... ..+++..-=|.+. .......+.++++||+... ..+..+.+..
T Consensus 3 ~~~VLFVC~gN~cRSpmAEa~~~~~~~--~~~~v~SAGt~~~--------~~~p~a~~~l~~~Gid~s~-~~ar~l~~~~ 71 (131)
T 1jf8_A 3 KKTIYFISTGNSARSQMAEGWGKEILG--EGWNVYSAGIETH--------GVNPKAIEAMKEVDIDISN-HTSDLIDNDI 71 (131)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHST--TTEEEEEEESSCC--------CCCHHHHHHHHHTTCCCTT-CCCCBCCHHH
T ss_pred CCEEEEEcCCcchHHHHHHHHHHHhcC--CCEEEEcCcCCCC--------CCCHHHHHHHHHcCCCccc-CccccCChHH
Confidence 56899999888655533 556654321 2455543333331 1234567888999999321 2344454433
Q ss_pred HHHHHHhcCCcEEEEec
Q 048078 128 FLSNLRALQPELCITAA 144 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~ 144 (378)
+ ..+|+||++.
T Consensus 72 ~------~~~D~Ii~m~ 82 (131)
T 1jf8_A 72 L------KQSDLVVTLC 82 (131)
T ss_dssp H------HHCSEEEECS
T ss_pred h------ccCCEEEEcC
Confidence 2 2589999984
No 192
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=45.75 E-value=50 Score=30.99 Aligned_cols=23 Identities=13% Similarity=0.066 Sum_probs=20.0
Q ss_pred CceEEEEecCcchHHHHHHHHHc
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNA 71 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~ 71 (378)
.+||+|+|.+.++......|.+.
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~ 38 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDS 38 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHT
T ss_pred CCEEEEECchHHHHHHHHHHHHC
Confidence 47899999999999988888775
No 193
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=45.48 E-value=12 Score=33.31 Aligned_cols=42 Identities=19% Similarity=0.227 Sum_probs=27.4
Q ss_pred CCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCC
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRD 93 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~g 93 (378)
.+.+||+++|.+..+...++.+. ... ++++++++-..+...|
T Consensus 78 ~~~~rV~IIGaG~~G~~la~~~~----~~~-g~~iVg~~D~dp~k~g 119 (211)
T 2dt5_A 78 NRKWGLCIVGMGRLGSALADYPG----FGE-SFELRGFFDVDPEKVG 119 (211)
T ss_dssp TSCEEEEEECCSHHHHHHHHCSC----CCS-SEEEEEEEESCTTTTT
T ss_pred CCCCEEEEECccHHHHHHHHhHh----hcC-CcEEEEEEeCCHHHHh
Confidence 34689999999976555444321 123 6899999975544433
No 194
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=45.23 E-value=15 Score=32.18 Aligned_cols=33 Identities=18% Similarity=0.215 Sum_probs=23.0
Q ss_pred CCCCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEE
Q 048078 45 SVSRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAA 83 (378)
Q Consensus 45 ~~~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~ 83 (378)
.+...+||+|+|.+.++....+.|.+. +++|.+
T Consensus 24 ~~~~~~~I~iiG~G~~G~~la~~l~~~------g~~V~~ 56 (215)
T 2vns_A 24 VPDEAPKVGILGSGDFARSLATRLVGS------GFKVVV 56 (215)
T ss_dssp -----CCEEEECCSHHHHHHHHHHHHT------TCCEEE
T ss_pred CCCCCCEEEEEccCHHHHHHHHHHHHC------CCEEEE
Confidence 334568999999999988888888875 466653
No 195
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=45.16 E-value=47 Score=31.83 Aligned_cols=36 Identities=19% Similarity=0.085 Sum_probs=21.7
Q ss_pred CCCCCceEEEEecCc-----chHHHHHHHHHccCCCCCCceEEEEEc
Q 048078 45 SVSRKKPLVFLGSPQ-----VSVNVLDALFNASSSPDSIFEVAAIVT 86 (378)
Q Consensus 45 ~~~~~~rIvf~Gs~~-----~a~~~L~~L~~~~~~~~~~~ei~~Vvt 86 (378)
.....|||+|++.+. ....+.++|.+. +|+|..+.+
T Consensus 16 ~~~~~mrIl~~~~~~~GHv~p~l~la~~L~~~------GheV~~~~~ 56 (441)
T 2yjn_A 16 PRGSHMRVVFSSMASKSHLFGLVPLAWAFRAA------GHEVRVVAS 56 (441)
T ss_dssp ---CCCEEEEECCSCHHHHTTTHHHHHHHHHT------TCEEEEEEC
T ss_pred ccCCccEEEEEcCCCcchHhHHHHHHHHHHHC------CCeEEEEeC
Confidence 344568999997653 234566677664 688766543
No 196
>3t38_A Arsenate reductase; low molecular weight tyrosine phosphatase fold, reduction of to arsenite, oxidoreductase; 2.20A {Corynebacterium glutamicum}
Probab=44.30 E-value=1.3e+02 Score=26.47 Aligned_cols=85 Identities=20% Similarity=0.263 Sum_probs=47.1
Q ss_pred CCCceEEEEecCcchHHHH-HHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCc
Q 048078 47 SRKKPLVFLGSPQVSVNVL-DALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGE 125 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L-~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~ 125 (378)
..++||+|+-+++..-+-+ ++|++.... ..+++..-=+.+.. . ......+.++++||+... ..+..+.+
T Consensus 79 ~~~~~VLFVCtgN~cRSpmAEal~~~~~~--~~~~v~SAGt~~g~------~-~dp~a~~vl~e~Gidis~-~~sr~l~~ 148 (213)
T 3t38_A 79 SPVPQVLFICVHNAGRSQIASALLSHYAG--SSVEVRSAGSLPAS------E-IHPLVLEILSERGVNISD-AFPKPLTD 148 (213)
T ss_dssp SCCCEEEEEESSSSSHHHHHHHHHHHHHG--GGCEEEEEESSCCS------S-CCHHHHHHHHHTTCCCTT-CCCCBCCH
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHHhcc--CceEEEecccCCCC------C-CCHHHHHHHHHcCCCccc-CcCCcCCH
Confidence 3478999998888554432 444443110 13555433333211 1 224567888899999321 23444443
Q ss_pred HHHHHHHHhcCCcEEEEecCCC
Q 048078 126 DAFLSNLRALQPELCITAAYGN 147 (378)
Q Consensus 126 ~~~~~~l~~~~~Dliv~~~~~~ 147 (378)
..+ ..+|+||++....
T Consensus 149 ~~~------~~~DlIitMd~~~ 164 (213)
T 3t38_A 149 DVI------RASDYVITMGCGD 164 (213)
T ss_dssp HHH------HHCSEEEESSCCS
T ss_pred HHh------ccCCEEEEecCcc
Confidence 322 2589999997653
No 197
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=44.29 E-value=77 Score=29.72 Aligned_cols=96 Identities=13% Similarity=0.085 Sum_probs=54.9
Q ss_pred CCCceEEEEecCc---chHHHHHHHHHccCCCCC-CceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCC
Q 048078 47 SRKKPLVFLGSPQ---VSVNVLDALFNASSSPDS-IFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPER 122 (378)
Q Consensus 47 ~~~~rIvf~Gs~~---~a~~~L~~L~~~~~~~~~-~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~ 122 (378)
-..+||+|+|-.. .+.+.+..+.. . ++++. +++ |+.- ..+..+.+.|++.|..+.. ..+
T Consensus 149 l~glkva~vGD~~~~rva~Sl~~~~~~------~~G~~v~-~~~-P~~~------~~~~~~~~~~~~~g~~~~~---~~d 211 (306)
T 4ekn_B 149 IDGIKIAFVGDLKYGRTVHSLVYALSL------FENVEMY-FVS-PKEL------RLPKDIIEDLKAKNIKFYE---KES 211 (306)
T ss_dssp STTCEEEEESCTTTCHHHHHHHHHHHT------SSSCEEE-EEC-CGGG------CCCHHHHHHHHHTTCCEEE---ESC
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHh------cCCCEEE-EEC-Cccc------ccCHHHHHHHHHcCCEEEE---EcC
Confidence 3578999999753 33333343322 2 45643 333 3321 1234677888899988431 122
Q ss_pred CCcHHHHHHHHhcCCcEEEEecC----------------CCcCChhhhcCCCCceEEEccCC
Q 048078 123 AGEDAFLSNLRALQPELCITAAY----------------GNILPSKFLNIPPMGTVNIHPSL 168 (378)
Q Consensus 123 ~~~~~~~~~l~~~~~Dliv~~~~----------------~~ilp~~il~~~~~g~iNiHpSl 168 (378)
.. +.+ .++|++.+-.| .+.|..++++. -.++-+||.+
T Consensus 212 ~~-----eav--~~aDvvy~~~~q~er~~~~~e~~~~~~~y~v~~~~l~~--~~ai~mH~lP 264 (306)
T 4ekn_B 212 LD-----DLD--DDIDVLYVTRIQKERFPDPNEYEKVKGSYKIKREYVEG--KKFIIMHPLP 264 (306)
T ss_dssp GG-----GCC--TTCSEEEECCCCGGGCCSHHHHHHHHHHHCBCHHHHTT--CCCEEECCSC
T ss_pred HH-----HHh--cCCCEEEeCCcccccCCCHHHHHHhccCcEECHHHHcC--CCCEEECCCC
Confidence 11 111 36888887644 14567778877 3589999976
No 198
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=44.00 E-value=29 Score=30.94 Aligned_cols=33 Identities=12% Similarity=0.056 Sum_probs=25.1
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEc
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVT 86 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt 86 (378)
++|||++.|++.++..+.+.|++. +++|.++.-
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~------g~~V~~~~r 36 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQ------GWRIIGTSR 36 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGG------TCEEEEEES
T ss_pred CcCcEEEECCcHHHHHHHHHHHHC------CCEEEEEEc
Confidence 457999999977777788888875 578877653
No 199
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=43.95 E-value=55 Score=30.15 Aligned_cols=35 Identities=9% Similarity=-0.018 Sum_probs=26.8
Q ss_pred CCCceEEEEec-CcchHHHHHHHHHccCCCCCCceEEEEEcC
Q 048078 47 SRKKPLVFLGS-PQVSVNVLDALFNASSSPDSIFEVAAIVTQ 87 (378)
Q Consensus 47 ~~~~rIvf~Gs-~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~ 87 (378)
.+++||++.|- +.++...++.|.+. ++++++.|.+
T Consensus 5 ~~~~rVaViG~sG~~G~~~~~~l~~~------g~~~V~~V~p 40 (288)
T 2nu8_A 5 DKNTKVICQGFTGSQGTFHSEQAIAY------GTKMVGGVTP 40 (288)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHH------TCEEEEEECT
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC------CCeEEEEeCC
Confidence 45789999995 88888888888774 4777766654
No 200
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=43.69 E-value=30 Score=30.72 Aligned_cols=46 Identities=15% Similarity=0.252 Sum_probs=31.6
Q ss_pred ceEEEEecCcchHHHHHHHHHccCCCCCC-ceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCC
Q 048078 50 KPLVFLGSPQVSVNVLDALFNASSSPDSI-FEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFP 113 (378)
Q Consensus 50 ~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~-~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp 113 (378)
|||+|+|.+.++......|.+. + ++| .++ +++. ..+.++++++|+.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~------g~~~v-~~~-~r~~----------~~~~~~~~~~g~~ 47 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQ------GGYRI-YIA-NRGA----------EKRERLEKELGVE 47 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------CSCEE-EEE-CSSH----------HHHHHHHHHTCCE
T ss_pred CEEEEECchHHHHHHHHHHHHC------CCCeE-EEE-CCCH----------HHHHHHHHhcCCE
Confidence 6899999999999888888875 4 554 333 3321 2355666667776
No 201
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=43.61 E-value=9.4 Score=38.39 Aligned_cols=133 Identities=14% Similarity=0.142 Sum_probs=72.0
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCc---eEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCc
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIF---EVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGE 125 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~---ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~ 125 (378)
++||+++|.+..+..++..|.+.. ++ +|+ +.+++.. ++ +.++..|+++. ....+..+-
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~-----dv~~~~I~--vaD~~~~-~~----------~~~~~~g~~~~-~~~Vdadnv 73 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKF-----DIKPSQVT--IIAAEGT-KV----------DVAQQYGVSFK-LQQITPQNY 73 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHB-----CCCGGGEE--EEESSCC-SC----------CHHHHHTCEEE-ECCCCTTTH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCC-----CCceeEEE--Eeccchh-hh----------hHHhhcCCcee-EEeccchhH
Confidence 689999999999999998888763 33 333 2333332 11 23455577632 122233333
Q ss_pred HHHHH-HHHhcCCcEEEEecCCCcCChhhhcCC-CCc--eEEE--c--------cCCCCCCCCchHHHHHHHcCCc-EEE
Q 048078 126 DAFLS-NLRALQPELCITAAYGNILPSKFLNIP-PMG--TVNI--H--------PSLLPLYRGAAPVQRALQGGAK-ETG 190 (378)
Q Consensus 126 ~~~~~-~l~~~~~Dliv~~~~~~ilp~~il~~~-~~g--~iNi--H--------pSlLP~yRG~~pi~wai~~g~~-~tG 190 (378)
++.++ .|++ .|++|.+++.+ ....+++.. ..| .|+. | +++-|..|.-...+|+++.-.. ..|
T Consensus 74 ~~~l~aLl~~--~DvVIN~s~~~-~~l~Im~acleaGv~YlDTa~E~~~p~~~~~~~~p~~~~~Y~~~~~~~~~~~~~~G 150 (480)
T 2ph5_A 74 LEVIGSTLEE--NDFLIDVSIGI-SSLALIILCNQKGALYINAATEPWKEEFVMEKMALNRRTNYSLREEVLRLKDKTQK 150 (480)
T ss_dssp HHHTGGGCCT--TCEEEECCSSS-CHHHHHHHHHHHTCEEEESSCCCCCC----------CCCHHHHHHHHHTTTTTCCS
T ss_pred HHHHHHHhcC--CCEEEECCccc-cCHHHHHHHHHcCCCEEECCCCcccccccccccCcchhhhHHHHHHHHHHHHhcCC
Confidence 34443 5544 49999988644 333444422 222 2222 1 1222344445578899887653 356
Q ss_pred EEEEEecCCCCCCCe
Q 048078 191 VSLAFTVRALDAGPV 205 (378)
Q Consensus 191 vTih~~~~~~D~G~I 205 (378)
.-.+..|+|-|=|
T Consensus 151 --tAilg~G~nPGvv 163 (480)
T 2ph5_A 151 --TALITHGANPGLV 163 (480)
T ss_dssp --CEECSCBTTTBHH
T ss_pred --cEEecCCCCccHH
Confidence 4457788887743
No 202
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=43.46 E-value=1.1e+02 Score=26.63 Aligned_cols=76 Identities=9% Similarity=0.026 Sum_probs=41.5
Q ss_pred CceEEEEecCc-chHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCc-H
Q 048078 49 KKPLVFLGSPQ-VSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGE-D 126 (378)
Q Consensus 49 ~~rIvf~Gs~~-~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~-~ 126 (378)
..+|++.|... ++..+.+.|++. +++|+++.-+++ ...+.+++.+-... ++. -++.+ +
T Consensus 12 ~k~vlVTGasggiG~~~a~~l~~~------G~~V~~~~r~~~------------~~~~~~~~~~~~~~-~~~-~D~~~~~ 71 (265)
T 2o23_A 12 GLVAVITGGASGLGLATAERLVGQ------GASAVLLDLPNS------------GGEAQAKKLGNNCV-FAP-ADVTSEK 71 (265)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT------TCEEEEEECTTS------------SHHHHHHHHCTTEE-EEE-CCTTCHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHC------CCEEEEEeCCcH------------hHHHHHHHhCCceE-EEE-cCCCCHH
Confidence 45788888544 666677888775 577765543322 13455555444432 222 23333 3
Q ss_pred HHHHHHHhc-----CCcEEEEec
Q 048078 127 AFLSNLRAL-----QPELCITAA 144 (378)
Q Consensus 127 ~~~~~l~~~-----~~Dliv~~~ 144 (378)
++.+.+++. .+|++|..+
T Consensus 72 ~v~~~~~~~~~~~g~id~li~~A 94 (265)
T 2o23_A 72 DVQTALALAKGKFGRVDVAVNCA 94 (265)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHHHCCCCCEEEECC
Confidence 333334322 799988765
No 203
>1p8a_A Protein tyrosine phosphatase; hydrolase; NMR {Tritrichomonas foetus} SCOP: c.44.1.1
Probab=42.91 E-value=96 Score=25.30 Aligned_cols=81 Identities=9% Similarity=0.089 Sum_probs=45.8
Q ss_pred CCceEEEEecCc-----chHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCC
Q 048078 48 RKKPLVFLGSPQ-----VSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPER 122 (378)
Q Consensus 48 ~~~rIvf~Gs~~-----~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~ 122 (378)
+++||+|+-+++ ++...|+.+... .+++..-=|.+.. . |.. ......+.++++||+... ..+..
T Consensus 3 ~~~~VLFVC~gN~cRSpmAEal~~~~~~~------~~~v~SAGt~~~~-~--g~~-~~p~a~~~l~e~Gid~s~-~~sr~ 71 (146)
T 1p8a_A 3 EKKAVLFVCLGNICRSPACEGICRDMVGD------KLIIDSAATSGFH-V--GQS-PDTRSQKVCKSNGVDISK-QRARQ 71 (146)
T ss_dssp CCCCEEEESSSSCSSSTTHHHHHHHHHSS------CSSCEEECSCTTS-C--SCS-CTHHHHHHHHHHSCCCCC-CCCCC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHHhcCC------CEEEEeeecCCcc-c--CCC-CCHHHHHHHHHcCCChhc-Ceecc
Confidence 567999998776 455566665542 2444322222210 0 111 234566788899999431 33555
Q ss_pred CCcHHHHHHHHhcCCcEEEEecC
Q 048078 123 AGEDAFLSNLRALQPELCITAAY 145 (378)
Q Consensus 123 ~~~~~~~~~l~~~~~Dliv~~~~ 145 (378)
+.+..+ ..+|+||++.-
T Consensus 72 l~~~~~------~~~DlIi~m~~ 88 (146)
T 1p8a_A 72 ITKADF------SKFDVIAALDQ 88 (146)
T ss_dssp CCSHHH------HSCSEEEESSH
T ss_pred CCHhHh------hcCCEEEEeCh
Confidence 554432 37999999875
No 204
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=42.81 E-value=17 Score=31.96 Aligned_cols=72 Identities=10% Similarity=0.068 Sum_probs=41.5
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
.+.+|+++|.+.++....+.|.+. ++ |+ |+...+. .+..+ . .|+. +..- +..+++
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~------g~-v~-vid~~~~-----------~~~~~-~-~~~~---~i~g-d~~~~~ 62 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGS------EV-FV-LAEDENV-----------RKKVL-R-SGAN---FVHG-DPTRVS 62 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTS------EE-EE-EESCGGG-----------HHHHH-H-TTCE---EEES-CTTCHH
T ss_pred CCCEEEEECCChHHHHHHHHHHhC------Ce-EE-EEECCHH-----------HHHHH-h-cCCe---EEEc-CCCCHH
Confidence 367899999999888888877653 45 43 4432211 23333 3 6766 4332 334555
Q ss_pred HHHHHHhcCCcEEEEec
Q 048078 128 FLSNLRALQPELCITAA 144 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~ 144 (378)
.++...-.++|.+|++.
T Consensus 63 ~l~~a~i~~ad~vi~~~ 79 (234)
T 2aef_A 63 DLEKANVRGARAVIVDL 79 (234)
T ss_dssp HHHHTTCTTCSEEEECC
T ss_pred HHHhcCcchhcEEEEcC
Confidence 55544345788888653
No 205
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=42.75 E-value=56 Score=25.65 Aligned_cols=86 Identities=8% Similarity=-0.027 Sum_probs=46.4
Q ss_pred CCCCCCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceec-CCC
Q 048078 43 AFSVSRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIF-TPE 121 (378)
Q Consensus 43 ~~~~~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~-~~~ 121 (378)
......+.||+++..+......|+.+++.. ..+.++..+.+.. ...+.+.+.......+. ...
T Consensus 9 ~~~~~~~~~iLivdd~~~~~~~l~~~L~~~----~~~~~v~~~~~~~------------~a~~~l~~~~~dlii~d~~l~ 72 (152)
T 3eul_A 9 SNPQPEKVRVVVGDDHPLFREGVVRALSLS----GSVNVVGEADDGA------------AALELIKAHLPDVALLDYRMP 72 (152)
T ss_dssp -----CCEEEEEECSSHHHHHHHHHHHHHH----SSEEEEEEESSHH------------HHHHHHHHHCCSEEEEETTCS
T ss_pred CCCCCceEEEEEEcCCHHHHHHHHHHHhhC----CCeEEEEEeCCHH------------HHHHHHHhcCCCEEEEeCCCC
Confidence 334566889999999877777888777652 1234444444322 24555555554432111 123
Q ss_pred CCCcHHHHHHHHhcCCc--EEEEec
Q 048078 122 RAGEDAFLSNLRALQPE--LCITAA 144 (378)
Q Consensus 122 ~~~~~~~~~~l~~~~~D--liv~~~ 144 (378)
..+.-++++.+++..++ ++++.+
T Consensus 73 ~~~g~~~~~~l~~~~~~~~ii~~s~ 97 (152)
T 3eul_A 73 GMDGAQVAAAVRSYELPTRVLLISA 97 (152)
T ss_dssp SSCHHHHHHHHHHTTCSCEEEEEES
T ss_pred CCCHHHHHHHHHhcCCCCeEEEEEc
Confidence 34456777888776665 444443
No 206
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=42.71 E-value=60 Score=28.67 Aligned_cols=31 Identities=10% Similarity=0.088 Sum_probs=20.9
Q ss_pred CCceEEEEecC-cchHHHHHHHHHccCCCCCCceEEEE
Q 048078 48 RKKPLVFLGSP-QVSVNVLDALFNASSSPDSIFEVAAI 84 (378)
Q Consensus 48 ~~~rIvf~Gs~-~~a~~~L~~L~~~~~~~~~~~ei~~V 84 (378)
...+|++.|.. .++..+.+.|++. +++|+++
T Consensus 15 ~~k~vlITGasggiG~~~a~~l~~~------G~~V~~~ 46 (278)
T 2bgk_A 15 QDKVAIITGGAGGIGETTAKLFVRY------GAKVVIA 46 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT------TCEEEEE
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHC------CCEEEEE
Confidence 34678888854 4666677888775 5776654
No 207
>2xdq_A Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=42.62 E-value=19 Score=35.57 Aligned_cols=120 Identities=18% Similarity=0.232 Sum_probs=65.2
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCC-CceecCCCCCCcHH
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFP-ADLIFTPERAGEDA 127 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp-~~~v~~~~~~~~~~ 127 (378)
..|++++|.+..+....+.|.+. +++++.+.|.-.... -.+.....+.+.++..+.+ .. +.. +.+..+
T Consensus 317 GKrv~i~g~~~~~~~la~~L~el------Gm~vv~~gt~~~~~~--~~~~~~~~l~~~~~~~~~~~~~-v~~--~~d~~e 385 (460)
T 2xdq_A 317 GKSVFFMGDNLLEISLARFLIRC------GMRVLEIGIPYMDKR--YQAAELALLSQTCAEMGHPLPT-IVE--KPDNYN 385 (460)
T ss_dssp TCEEEECCCSSCHHHHHHHHHHT------TCEEEEEEESCCCHH--HHHHHHHHHHHHHHHTTCCCCE-EEE--SCCHHH
T ss_pred CCEEEEECCchHHHHHHHHHHHC------CCEEEEeCCCCCChh--HHHHHHHHHHHHHHhhCCCCcE-EEE--CCCHHH
Confidence 46999999888888888888763 799998876421100 0000011233444455542 22 322 234457
Q ss_pred HHHHHHhcCCcEEEEecCCCcCChhhhcCCCCceEEE---ccCCCCCCCCchHHHHHHH
Q 048078 128 FLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNI---HPSLLPLYRGAAPVQRALQ 183 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~~~~ilp~~il~~~~~g~iNi---HpSlLP~yRG~~pi~wai~ 183 (378)
+.+.+++.+||++|.- .....| +. .....++.. +...+=-|+|+.-+...|.
T Consensus 386 l~~~i~~~~pDL~ig~-~~~~~~--~~-r~G~P~~d~~~~~~~p~~Gy~Ga~~l~~~i~ 440 (460)
T 2xdq_A 386 QLQRIKALQPDLVITG-MAHANP--LE-ARGISTKWSVEFTFAQIHGFGNARDILELVT 440 (460)
T ss_dssp HHHHHHHHCCSEEEEC-HHHHHH--HH-TBTCCEEETTHHHHSCCBSGGGHHHHHHHHH
T ss_pred HHHHHhccCCCEEEeC-cccCce--ee-eccCcEEEecCceecCcccHHHHHHHHHHHH
Confidence 7788999999999943 122221 11 112223322 2445556888655554444
No 208
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=42.60 E-value=17 Score=28.58 Aligned_cols=105 Identities=11% Similarity=0.123 Sum_probs=54.0
Q ss_pred CCCCCCCCCCceEEEEecCcchHHHHHHHHHccCCCCCC-ceEEEEEcCCCCCCCCCCccCChHHHHHHHH-CCCCCcee
Q 048078 40 TPSAFSVSRKKPLVFLGSPQVSVNVLDALFNASSSPDSI-FEVAAIVTQPPSRRDRGRKVLPSPVAQYALD-RGFPADLI 117 (378)
Q Consensus 40 ~~~~~~~~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~-~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~-~gIp~~~v 117 (378)
.+++.....+.||+++-.+......|+.+++.. + +++..+ ++... .+..+.++ ...... +
T Consensus 11 ~~~~~~~~~~~~ilivdd~~~~~~~l~~~L~~~-----g~~~v~~~-~~~~~-----------~~~~~~~~~~~~dlv-i 72 (146)
T 4dad_A 11 HHENLYFQGMINILVASEDASRLAHLARLVGDA-----GRYRVTRT-VGRAA-----------QIVQRTDGLDAFDIL-M 72 (146)
T ss_dssp --CCCCCGGGCEEEEECSCHHHHHHHHHHHHHH-----CSCEEEEE-CCCHH-----------HHTTCHHHHTTCSEE-E
T ss_pred CCCCCCcCCCCeEEEEeCCHHHHHHHHHHHhhC-----CCeEEEEe-CCHHH-----------HHHHHHhcCCCCCEE-E
Confidence 334444566889999999887777888877753 3 666543 22211 12233333 444322 2
Q ss_pred cCC--CCCCcHHHHHHHHhcCCc--EEEEecCCCcCChhhhcCCCCceEEE
Q 048078 118 FTP--ERAGEDAFLSNLRALQPE--LCITAAYGNILPSKFLNIPPMGTVNI 164 (378)
Q Consensus 118 ~~~--~~~~~~~~~~~l~~~~~D--liv~~~~~~ilp~~il~~~~~g~iNi 164 (378)
... ...+.-++++.|++..++ ++++.++. =+....+..+.|+..+
T Consensus 73 ~D~~l~~~~g~~~~~~l~~~~~~~~ii~lt~~~--~~~~~~~~~~~ga~~~ 121 (146)
T 4dad_A 73 IDGAALDTAELAAIEKLSRLHPGLTCLLVTTDA--SSQTLLDAMRAGVRDV 121 (146)
T ss_dssp EECTTCCHHHHHHHHHHHHHCTTCEEEEEESCC--CHHHHHHHHTTTEEEE
T ss_pred EeCCCCCccHHHHHHHHHHhCCCCcEEEEeCCC--CHHHHHHHHHhCCcee
Confidence 221 222334566777766555 45555543 2233344445565544
No 209
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=42.49 E-value=1.1e+02 Score=27.63 Aligned_cols=80 Identities=11% Similarity=0.013 Sum_probs=41.5
Q ss_pred ceEEEEec-CcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcH-H
Q 048078 50 KPLVFLGS-PQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGED-A 127 (378)
Q Consensus 50 ~rIvf~Gs-~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~-~ 127 (378)
|+|++.|. +.++..+.+.|++. +++|+++.-..... ...+..+....+-... +.. .++.++ .
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~------G~~V~~~~~~~~~~--------~~~~~~~~~~~~~~~~-~~~-~Dl~~~~~ 64 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQN------GHDVIILDNLCNSK--------RSVLPVIERLGGKHPT-FVE-GDIRNEAL 64 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEECCSSCC--------TTHHHHHHHHHTSCCE-EEE-CCTTCHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHC------CCEEEEEecCCCcc--------hhHHHHHHhhcCCcce-EEE-ccCCCHHH
Confidence 68999985 44566666888875 57776653211110 1122222222222221 222 244444 4
Q ss_pred HHHHHHhcCCcEEEEecC
Q 048078 128 FLSNLRALQPELCITAAY 145 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~~ 145 (378)
+.+.++..++|++|-.+-
T Consensus 65 ~~~~~~~~~~D~vih~A~ 82 (338)
T 1udb_A 65 MTEILHDHAIDTVIHFAG 82 (338)
T ss_dssp HHHHHHHTTCSEEEECCS
T ss_pred HHHHhhccCCCEEEECCc
Confidence 445566567999987653
No 210
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=42.41 E-value=19 Score=32.39 Aligned_cols=34 Identities=9% Similarity=0.127 Sum_probs=23.9
Q ss_pred ceEEEEe-cCcchHHHHHHHHHccCCCCCCceEEEEEcCC
Q 048078 50 KPLVFLG-SPQVSVNVLDALFNASSSPDSIFEVAAIVTQP 88 (378)
Q Consensus 50 ~rIvf~G-s~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~ 88 (378)
|||++.| |+.++..+++.|.+. .+++|.++.-++
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~-----~g~~V~~~~R~~ 35 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIAN-----HIDHFHIGVRNV 35 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHT-----TCTTEEEEESSG
T ss_pred CEEEEEcCCchHHHHHHHHHhhC-----CCCcEEEEECCH
Confidence 6899999 566777777887764 157777765443
No 211
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=42.23 E-value=1e+02 Score=30.07 Aligned_cols=100 Identities=10% Similarity=0.104 Sum_probs=58.7
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceec---------
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIF--------- 118 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~--------- 118 (378)
.+.||+++|.+..+..+.+.+... +.+|. +.++.. ...+.+++.|.++..+.
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~l------Ga~V~--v~D~~~-----------~~l~~~~~~G~~~~~~~~~~~~d~~~ 249 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRL------GAVVS--ATDVRP-----------AAKEQVASLGAKFIAVEDEEFKAAET 249 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT------TCEEE--EECSST-----------THHHHHHHTTCEECCCCC--------
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC------CCEEE--EEcCCH-----------HHHHHHHHcCCceeeccccccccccc
Confidence 468999999998888887777654 56643 333322 12466677887621110
Q ss_pred ---CCCCCCc-------HHHHHHHHhcCCcEEEEec------CCCcCChhhhcCCCCceEEEccCC
Q 048078 119 ---TPERAGE-------DAFLSNLRALQPELCITAA------YGNILPSKFLNIPPMGTVNIHPSL 168 (378)
Q Consensus 119 ---~~~~~~~-------~~~~~~l~~~~~Dliv~~~------~~~ilp~~il~~~~~g~iNiHpSl 168 (378)
......+ ..+.+.+ .++|++|.+. -..++.++.++..+-|.+=+=-|.
T Consensus 250 ~~~ya~e~s~~~~~~~~~~l~e~l--~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~ 313 (405)
T 4dio_A 250 AGGYAKEMSGEYQVKQAALVAEHI--AKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAV 313 (405)
T ss_dssp ---------CHHHHHHHHHHHHHH--HTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTG
T ss_pred ccchhhhcchhhhhhhHhHHHHHh--cCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeC
Confidence 0000111 1222333 4799999763 236789999998887755554443
No 212
>4etn_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.10A {Bacillus subtilis} PDB: 4eti_A 1zgg_A
Probab=42.18 E-value=1.2e+02 Score=26.02 Aligned_cols=84 Identities=6% Similarity=0.082 Sum_probs=45.5
Q ss_pred CCCCceEEEEecCcchHH-----HHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCC
Q 048078 46 VSRKKPLVFLGSPQVSVN-----VLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTP 120 (378)
Q Consensus 46 ~~~~~rIvf~Gs~~~a~~-----~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~ 120 (378)
..+++||+|+-+++..-. .|+.++.... ..++|..-=|... + |. .......+.++++||+.. ..+
T Consensus 31 ~~~~~~VLFVC~gNiCRSpmAEai~r~~~~~~g---~~~~v~SAGt~~~-~---G~-~~dp~a~~vl~e~Gidis--hra 100 (184)
T 4etn_A 31 GRGSMDIIFVCTGNTSRSPMAEALFKSIAEREG---LNVNVRSAGVFAS-P---NG-KATPHAVEALFEKHIALN--HVS 100 (184)
T ss_dssp ---CEEEEEEESSSSSHHHHHHHHHHHHHHHHT---CCEEEEEEETTCC-T---TC-BCCHHHHHHHHHTTCCCC--CBC
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHHHHHhcC---CcEEEEeeecCCc-C---CC-CCCHHHHHHHHHcCCCch--hcc
Confidence 345799999998885443 4444443210 1355443333221 1 11 123456778889999954 344
Q ss_pred CCCCcHHHHHHHHhcCCcEEEEecC
Q 048078 121 ERAGEDAFLSNLRALQPELCITAAY 145 (378)
Q Consensus 121 ~~~~~~~~~~~l~~~~~Dliv~~~~ 145 (378)
..+.++.+ ..+|+||++.-
T Consensus 101 r~lt~~d~------~~~DlIltMd~ 119 (184)
T 4etn_A 101 SPLTEELM------ESADLVLAMTH 119 (184)
T ss_dssp CBCCHHHH------HHCSEEEESSH
T ss_pred CcCCHHHc------CCCCEEEEcCc
Confidence 55554332 25899999874
No 213
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=42.11 E-value=66 Score=30.30 Aligned_cols=40 Identities=18% Similarity=0.226 Sum_probs=28.9
Q ss_pred CceEEEEecCcchHHHHHHHHHccCC---CCCCceEEEEEcCC
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSS---PDSIFEVAAIVTQP 88 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~---~~~~~ei~~Vvt~~ 88 (378)
++||+++|.+..+...++.|.+.... ...+++|++|+...
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~ 44 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSK 44 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSS
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCC
Confidence 68999999999999999888764100 00268899987543
No 214
>3rh0_A Arsenate reductase; oxidoreductase; 1.72A {Corynebacterium glutamicum}
Probab=41.93 E-value=1e+02 Score=25.52 Aligned_cols=81 Identities=14% Similarity=0.115 Sum_probs=47.1
Q ss_pred CceEEEEecCcchHH-HHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 49 KKPLVFLGSPQVSVN-VLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~-~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
++||+|+-+++..-. .-++|++.... ..++|..-=|.+. .. ......+.++++||+... ..+..+.+..
T Consensus 20 ~~~VLFVC~gN~cRSpmAEal~~~~~~--~~~~v~SAGt~~g------~~-~dp~a~~vl~e~Gidis~-h~ar~l~~~~ 89 (148)
T 3rh0_A 20 MKSVLFVCVGNGGKSQMAAALAQKYAS--DSVEIHSAGTKPA------QG-LNQLSVESIAEVGADMSQ-GIPKAIDPEL 89 (148)
T ss_dssp CCEEEEEESSSSSHHHHHHHHHHHHCC--TTSEEEEEESSCC------SS-CCHHHHHHHHHTTCCCTT-CCCCBCCHHH
T ss_pred CCEEEEECCCchhHHHHHHHHHHHhcC--CCEEEEecccCCC------CC-CCHHHHHHHHHcCCCcCC-CeeeECCHHH
Confidence 679999998886644 34666654321 2466554334331 11 234567788899999321 2344454332
Q ss_pred HHHHHHhcCCcEEEEecC
Q 048078 128 FLSNLRALQPELCITAAY 145 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~~ 145 (378)
+ ..+|+||++.-
T Consensus 90 ~------~~~DlIitM~~ 101 (148)
T 3rh0_A 90 L------RTVDRVVILGD 101 (148)
T ss_dssp H------HHCSEEEEESS
T ss_pred h------cCCCEEEEecC
Confidence 2 25899999853
No 215
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=41.86 E-value=21 Score=31.91 Aligned_cols=48 Identities=17% Similarity=0.371 Sum_probs=33.6
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCC
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFP 113 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp 113 (378)
+|||+|+|.+.++....+.|.+. +++++.++...+ ..+.++++++|+.
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~------g~~~v~~~~~~~-----------~~~~~~~~~~g~~ 57 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRK------GFRIVQVYSRTE-----------ESARELAQKVEAE 57 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHH------TCCEEEEECSSH-----------HHHHHHHHHTTCE
T ss_pred CCeEEEEcCCHHHHHHHHHHHHC------CCeEEEEEeCCH-----------HHHHHHHHHcCCc
Confidence 58999999999998888888775 466555554321 2355666666765
No 216
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=41.62 E-value=16 Score=35.73 Aligned_cols=35 Identities=6% Similarity=0.141 Sum_probs=28.7
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCC
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPP 89 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~ 89 (378)
..||+++|.++.+..+++++.+. ++++++|.+.++
T Consensus 6 ~~kiLI~g~g~~a~~i~~aa~~~------G~~~v~v~~~~~ 40 (446)
T 3ouz_A 6 IKSILIANRGEIALRALRTIKEM------GKKAICVYSEAD 40 (446)
T ss_dssp CCEEEECCCHHHHHHHHHHHHHT------TCEEEEEEEGGG
T ss_pred cceEEEECCCHHHHHHHHHHHHc------CCEEEEEEcCcc
Confidence 45999999999888888888774 799988876654
No 217
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=41.41 E-value=16 Score=28.84 Aligned_cols=29 Identities=21% Similarity=0.301 Sum_probs=22.4
Q ss_pred ceEEEEecCcchHHHHHHHHHccCCCCCCceEEEE
Q 048078 50 KPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAI 84 (378)
Q Consensus 50 ~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~V 84 (378)
.+|+++|.+.++....+.|.+. +++|+.+
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~------g~~v~~~ 35 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRM------GHEVLAV 35 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT------TCCCEEE
T ss_pred CcEEEECCCHHHHHHHHHHHHC------CCEEEEE
Confidence 4799999999888888888774 4665543
No 218
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=41.04 E-value=1.3e+02 Score=27.11 Aligned_cols=34 Identities=18% Similarity=0.193 Sum_probs=26.6
Q ss_pred ceEEEEe-cCcchHHHHHHHHHccCCCCCCceEEEEEcCC
Q 048078 50 KPLVFLG-SPQVSVNVLDALFNASSSPDSIFEVAAIVTQP 88 (378)
Q Consensus 50 ~rIvf~G-s~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~ 88 (378)
|||+++| ++.++..+.+.+.+. .++++++++-..
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~-----~~~elva~~d~~ 35 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAA-----DDLTLSAELDAG 35 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHC-----TTCEEEEEECTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-----CCCEEEEEEccC
Confidence 6999999 598888888887654 368999988543
No 219
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=41.04 E-value=29 Score=33.15 Aligned_cols=28 Identities=11% Similarity=0.178 Sum_probs=23.6
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEE
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVA 82 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~ 82 (378)
.|||+|+|.+.++......|.+. +++|.
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~------G~~V~ 49 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKG------GHECV 49 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEE
T ss_pred CCEEEEECchHHHHHHHHHHHhC------CCEEE
Confidence 58999999999999998988875 56654
No 220
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=40.54 E-value=96 Score=31.89 Aligned_cols=80 Identities=11% Similarity=0.141 Sum_probs=44.5
Q ss_pred CCceEEEEe-cCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHH--HHCCCCCceecCCCCCC
Q 048078 48 RKKPLVFLG-SPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYA--LDRGFPADLIFTPERAG 124 (378)
Q Consensus 48 ~~~rIvf~G-s~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A--~~~gIp~~~v~~~~~~~ 124 (378)
+.++|++.| ++-++..+.+.|++. +++|+++.-.+... ...+.++. ...++. +... ++.
T Consensus 10 ~~~~ilVTGatG~IG~~l~~~L~~~------G~~V~~~~r~~~~~--------~~~~~~l~~~~~~~v~---~v~~-Dl~ 71 (699)
T 1z45_A 10 TSKIVLVTGGAGYIGSHTVVELIEN------GYDCVVADNLSNST--------YDSVARLEVLTKHHIP---FYEV-DLC 71 (699)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT------TCEEEEEECCSSCC--------THHHHHHHHHHTSCCC---EEEC-CTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC------cCEEEEEECCCcch--------HHHHHHHhhccCCceE---EEEc-CCC
Confidence 357899998 455666677888875 57777654322211 01122222 124555 3332 344
Q ss_pred c-HHHHHHHHhcCCcEEEEecC
Q 048078 125 E-DAFLSNLRALQPELCITAAY 145 (378)
Q Consensus 125 ~-~~~~~~l~~~~~Dliv~~~~ 145 (378)
+ +.+.+.+++.++|++|-++.
T Consensus 72 d~~~l~~~~~~~~~D~Vih~A~ 93 (699)
T 1z45_A 72 DRKGLEKVFKEYKIDSVIHFAG 93 (699)
T ss_dssp CHHHHHHHHHHSCCCEEEECCS
T ss_pred CHHHHHHHHHhCCCCEEEECCc
Confidence 4 34445566668999987764
No 221
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=40.43 E-value=44 Score=30.25 Aligned_cols=27 Identities=19% Similarity=0.223 Sum_probs=23.2
Q ss_pred ceEEEEecCcchHHHHHHHHHccCCCCCCceEE
Q 048078 50 KPLVFLGSPQVSVNVLDALFNASSSPDSIFEVA 82 (378)
Q Consensus 50 ~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~ 82 (378)
|||+|+|.+.++......|.+. +++|.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~------G~~V~ 28 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA------GCSVT 28 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEE
T ss_pred CEEEEEeecHHHHHHHHHHHHC------CCeEE
Confidence 7999999999999999998875 57765
No 222
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=40.37 E-value=29 Score=33.87 Aligned_cols=35 Identities=11% Similarity=0.173 Sum_probs=27.7
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCC
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPP 89 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~ 89 (378)
..||+++|.+..+..+++++.+. ++++++|.+.++
T Consensus 6 ~k~ILI~g~g~~~~~i~~a~~~~------G~~vv~v~~~~~ 40 (461)
T 2dzd_A 6 IRKVLVANRGEIAIRVFRACTEL------GIRTVAIYSKED 40 (461)
T ss_dssp CSEEEECSCHHHHHHHHHHHHHH------TCEEEEEECGGG
T ss_pred CcEEEEECCcHHHHHHHHHHHHc------CCEEEEEECCcc
Confidence 45899999988888888888764 788888877654
No 223
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=40.32 E-value=75 Score=29.40 Aligned_cols=17 Identities=24% Similarity=0.235 Sum_probs=13.0
Q ss_pred HHHHHHHhcCCcEEEEe
Q 048078 127 AFLSNLRALQPELCITA 143 (378)
Q Consensus 127 ~~~~~l~~~~~Dliv~~ 143 (378)
.+.+.+++.+||++++-
T Consensus 93 ~l~~~l~~~~pD~Vi~d 109 (402)
T 3ia7_A 93 AAEEALGDNPPDLVVYD 109 (402)
T ss_dssp HHHHHHTTCCCSEEEEE
T ss_pred HHHHHHhccCCCEEEEC
Confidence 34566778899999986
No 224
>1jl3_A Arsenate reductase; alpha-beta fold, PTP-loop, oxidoreductase; 1.60A {Bacillus subtilis} SCOP: c.44.1.1 PDB: 1z2d_A 1z2e_A 2ipa_B
Probab=40.27 E-value=69 Score=25.92 Aligned_cols=79 Identities=13% Similarity=0.113 Sum_probs=45.5
Q ss_pred CceEEEEecCcchHHHH-HHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 49 KKPLVFLGSPQVSVNVL-DALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L-~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
++||+|+=+++..-+-+ ++|++.... ..+++..-=|.+. .......+.++++||+... ..+..+.+..
T Consensus 3 ~~~VLFVC~gN~cRSpmAEai~~~~~~--~~~~v~SAGt~~~--------~~~p~a~~~l~~~Gid~s~-~~sr~l~~~~ 71 (139)
T 1jl3_A 3 NKIIYFLCTGNSCRSQMAEGWAKQYLG--DEWKVYSAGIEAH--------GLNPNAVKAMKEVGIDISN-QTSDIIDSDI 71 (139)
T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHSC--TTEEEEEEESSCC--------CCCHHHHHHHHHTTCCCTT-CCCCBCCHHH
T ss_pred CCeEEEEcCCchHHHHHHHHHHHHhCC--CCEEEEcCcCCCC--------CCCHHHHHHHHHcCCCccc-CccCcCCHHH
Confidence 45899999888655543 556654321 2355543333331 1223567888999999321 2344454332
Q ss_pred HHHHHHhcCCcEEEEec
Q 048078 128 FLSNLRALQPELCITAA 144 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~ 144 (378)
+ ..+|+||++.
T Consensus 72 ~------~~~D~Ii~m~ 82 (139)
T 1jl3_A 72 L------NNADLVVTLC 82 (139)
T ss_dssp H------TTCSEEEECS
T ss_pred h------hcCCEEEEeC
Confidence 1 4699999983
No 225
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=40.13 E-value=35 Score=30.39 Aligned_cols=31 Identities=13% Similarity=0.288 Sum_probs=20.5
Q ss_pred CCceEEEEec-CcchHHHHHHHHHccCCCCCCceEEEE
Q 048078 48 RKKPLVFLGS-PQVSVNVLDALFNASSSPDSIFEVAAI 84 (378)
Q Consensus 48 ~~~rIvf~Gs-~~~a~~~L~~L~~~~~~~~~~~ei~~V 84 (378)
++|||++.|. +.++..+.+.|++. +++|.++
T Consensus 4 M~m~ilVtGatG~iG~~l~~~L~~~------g~~V~~~ 35 (287)
T 3sc6_A 4 MKERVIITGANGQLGKQLQEELNPE------EYDIYPF 35 (287)
T ss_dssp -CEEEEEESTTSHHHHHHHHHSCTT------TEEEEEE
T ss_pred ceeEEEEECCCCHHHHHHHHHHHhC------CCEEEEe
Confidence 4578999995 55666666666653 5777655
No 226
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis}
Probab=39.96 E-value=26 Score=39.39 Aligned_cols=35 Identities=11% Similarity=0.263 Sum_probs=29.6
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCC
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPP 89 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~ 89 (378)
..||+++|.++.+..+++++.+. ++++++|.++++
T Consensus 31 ~kkILI~grGeia~~iiraar~l------Gi~vVaV~s~~d 65 (1236)
T 3va7_A 31 FETVLIANRGEIAVRIMKTLKRM------GIKSVAVYSDPD 65 (1236)
T ss_dssp CSEEEECCCHHHHHHHHHHHHHH------TCEEEEEECSGG
T ss_pred CCEEEEEcCCHHHHHHHHHHHHC------CCEEEEEEcCCC
Confidence 44899999999999999998875 799998887765
No 227
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=39.76 E-value=41 Score=30.65 Aligned_cols=28 Identities=18% Similarity=0.337 Sum_probs=23.6
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEE
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVA 82 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~ 82 (378)
.+||+|+|.+.++......|.+. +++|.
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~------G~~V~ 30 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKA------GYLLN 30 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHT------TCEEE
T ss_pred CCEEEEEeecHHHHHHHHHHHhC------CCeEE
Confidence 57999999999999999999875 56654
No 228
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=39.72 E-value=58 Score=29.58 Aligned_cols=80 Identities=14% Similarity=0.134 Sum_probs=42.5
Q ss_pred CceEEEEec-CcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCc-H
Q 048078 49 KKPLVFLGS-PQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGE-D 126 (378)
Q Consensus 49 ~~rIvf~Gs-~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~-~ 126 (378)
.++|++.|. +.++..+.+.|++. +++|+++.-.++.. ....+..+....++. +.. -++.+ +
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~------G~~V~~~~r~~~~~-------~~~~~~~~~~~~~~~---~~~-~Dl~d~~ 65 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEK------GYEVYGADRRSGEF-------ASWRLKELGIENDVK---IIH-MDLLEFS 65 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT------TCEEEEECSCCSTT-------TTHHHHHTTCTTTEE---ECC-CCTTCHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHC------CCEEEEEECCCccc-------ccccHhhccccCcee---EEE-CCCCCHH
Confidence 468999996 55666667788774 57776654322211 001111111011232 332 33444 4
Q ss_pred HHHHHHHhcCCcEEEEecC
Q 048078 127 AFLSNLRALQPELCITAAY 145 (378)
Q Consensus 127 ~~~~~l~~~~~Dliv~~~~ 145 (378)
.+.+.++..++|++|-.+.
T Consensus 66 ~~~~~~~~~~~d~vih~A~ 84 (345)
T 2z1m_A 66 NIIRTIEKVQPDEVYNLAA 84 (345)
T ss_dssp HHHHHHHHHCCSEEEECCC
T ss_pred HHHHHHHhcCCCEEEECCC
Confidence 4556666668999987764
No 229
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=39.59 E-value=70 Score=30.48 Aligned_cols=26 Identities=15% Similarity=0.199 Sum_probs=18.2
Q ss_pred CcCChhhhcCCCCceEEEccCCCCCCCC
Q 048078 147 NILPSKFLNIPPMGTVNIHPSLLPLYRG 174 (378)
Q Consensus 147 ~ilp~~il~~~~~g~iNiHpSlLP~yRG 174 (378)
+.|..++++..+-.++-+||. |.+||
T Consensus 272 y~vt~ell~~ak~dai~mHcL--Pa~Rg 297 (339)
T 4a8t_A 272 YQVNQEMMDRAGANCKFMHCL--PATRG 297 (339)
T ss_dssp TCBCHHHHHHHCTTCEEEECS--CCCBT
T ss_pred cccCHHHHHhcCCCcEEECCC--CCCCC
Confidence 445666666556678999984 77776
No 230
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=39.27 E-value=35 Score=30.49 Aligned_cols=81 Identities=10% Similarity=0.247 Sum_probs=50.2
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
...+|+++|.++.+...++.|+++ +.+|. ||++... ..+.+++++.++. +.. ....++.
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~------GA~Vt-Vvap~~~----------~~l~~l~~~~~i~---~i~-~~~~~~d 88 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQE------GAAIT-VVAPTVS----------AEINEWEAKGQLR---VKR-KKVGEED 88 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGG------CCCEE-EECSSCC----------HHHHHHHHTTSCE---EEC-SCCCGGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC------CCEEE-EECCCCC----------HHHHHHHHcCCcE---EEE-CCCCHhH
Confidence 368999999999999999999886 45554 5543221 3578888887776 332 1111111
Q ss_pred HHHHHHhcCCcEEEEecCCCcCChhhhc
Q 048078 128 FLSNLRALQPELCITAAYGNILPSKFLN 155 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~~~~ilp~~il~ 155 (378)
| .++|++|++.=..-+...+..
T Consensus 89 ----L--~~adLVIaAT~d~~~N~~I~~ 110 (223)
T 3dfz_A 89 ----L--LNVFFIVVATNDQAVNKFVKQ 110 (223)
T ss_dssp ----S--SSCSEEEECCCCTHHHHHHHH
T ss_pred ----h--CCCCEEEECCCCHHHHHHHHH
Confidence 2 368888876544444444433
No 231
>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ...
Probab=39.24 E-value=18 Score=35.16 Aligned_cols=34 Identities=12% Similarity=0.190 Sum_probs=27.1
Q ss_pred ceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCC
Q 048078 50 KPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPP 89 (378)
Q Consensus 50 ~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~ 89 (378)
.||+++|.+..+...++++.+. ++++++|.++++
T Consensus 3 k~ilI~g~g~~~~~~~~a~~~~------G~~vv~v~~~~~ 36 (449)
T 2w70_A 3 DKIVIANRGEIALRILRACKEL------GIKTVAVHSSAD 36 (449)
T ss_dssp SEEEECCCHHHHHHHHHHHHHH------TCEEEEEEEGGG
T ss_pred ceEEEeCCcHHHHHHHHHHHHc------CCeEEEEecccc
Confidence 4899999988888888888774 789888877544
No 232
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=39.24 E-value=94 Score=27.33 Aligned_cols=30 Identities=7% Similarity=-0.028 Sum_probs=21.6
Q ss_pred CceEEEEec-C-cchHHHHHHHHHccCCCCCCceEEEE
Q 048078 49 KKPLVFLGS-P-QVSVNVLDALFNASSSPDSIFEVAAI 84 (378)
Q Consensus 49 ~~rIvf~Gs-~-~~a~~~L~~L~~~~~~~~~~~ei~~V 84 (378)
..++++.|. + .++..+.+.|++. +++|+.+
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~~~------G~~V~~~ 53 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALLE------GADVVIS 53 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHHT------TCEEEEE
T ss_pred CCEEEEECCCCCchHHHHHHHHHHC------CCEEEEe
Confidence 457888886 4 4888888988875 5776544
No 233
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=39.17 E-value=37 Score=33.11 Aligned_cols=22 Identities=5% Similarity=-0.065 Sum_probs=15.1
Q ss_pred CceEEEEecCcchHHHHHHHHH
Q 048078 49 KKPLVFLGSPQVSVNVLDALFN 70 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~ 70 (378)
.|||+++|++.-......+|.+
T Consensus 3 ~mkvlviG~ggre~ala~~l~~ 24 (431)
T 3mjf_A 3 AMNILIIGNGGREHALGWKAAQ 24 (431)
T ss_dssp CEEEEEEECSHHHHHHHHHHTT
T ss_pred CcEEEEECCCHHHHHHHHHHHh
Confidence 6999999999433345555544
No 234
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=39.07 E-value=41 Score=30.36 Aligned_cols=27 Identities=15% Similarity=0.301 Sum_probs=22.5
Q ss_pred ceEEEEecCcchHHHHHHHHHccCCCCCCceEE
Q 048078 50 KPLVFLGSPQVSVNVLDALFNASSSPDSIFEVA 82 (378)
Q Consensus 50 ~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~ 82 (378)
|||+|+|.+.++......|.+. +++|.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~------g~~V~ 27 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKH------GYPLI 27 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHT------TCCEE
T ss_pred CeEEEEeccHHHHHHHHHHHHC------CCEEE
Confidence 6899999999999998988875 46654
No 235
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=38.97 E-value=1.3e+02 Score=28.39 Aligned_cols=102 Identities=12% Similarity=0.069 Sum_probs=60.9
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHC----CCCCceecCCCCC
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDR----GFPADLIFTPERA 123 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~----gIp~~~v~~~~~~ 123 (378)
...+|+|+|++..+...+++|+... +++-+.|+. ++. ....++++++ |++.. +. ++
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~~-----~~~~V~V~~-r~~----------~~a~~la~~~~~~~g~~~~-~~--~~- 187 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKHL-----GIEEIVAYD-TDP----------LATAKLIANLKEYSGLTIR-RA--SS- 187 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHS-----CCCEEEEEC-SSH----------HHHHHHHHHHTTCTTCEEE-EC--SS-
T ss_pred cCCeEEEECCcHHHHHHHHHHHHhC-----CCcEEEEEc-CCH----------HHHHHHHHHHHhccCceEE-Ee--CC-
Confidence 4569999999999999888887642 344455553 321 2356677664 65521 11 11
Q ss_pred CcHHHHHHHHhcCCcEEEEecCCC----cCChhhhcCCCCceEEEccCCCCCCCCchH
Q 048078 124 GEDAFLSNLRALQPELCITAAYGN----ILPSKFLNIPPMGTVNIHPSLLPLYRGAAP 177 (378)
Q Consensus 124 ~~~~~~~~l~~~~~Dliv~~~~~~----ilp~~il~~~~~g~iNiHpSlLP~yRG~~p 177 (378)
..+.++ ++|+++++.-.. ++..+.+. +...++.-.+.-|.-|=.++
T Consensus 188 ----~~eav~--~aDiVi~aTps~~~~pvl~~~~l~--~G~~V~~vgs~~p~~~El~~ 237 (350)
T 1x7d_A 188 ----VAEAVK--GVDIITTVTADKAYATIITPDMLE--PGMHLNAVGGDCPGKTELHA 237 (350)
T ss_dssp ----HHHHHT--TCSEEEECCCCSSEEEEECGGGCC--TTCEEEECSCCBTTBEEECH
T ss_pred ----HHHHHh--cCCEEEEeccCCCCCceecHHHcC--CCCEEEECCCCCCCceeeCH
Confidence 223332 589999887643 34444433 34577777777777554443
No 236
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=38.63 E-value=54 Score=30.42 Aligned_cols=71 Identities=11% Similarity=0.139 Sum_probs=44.5
Q ss_pred CCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCC--CCCceecCCCCCC
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG--FPADLIFTPERAG 124 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~g--Ip~~~v~~~~~~~ 124 (378)
...++|+|+|.+..+...++.|.+.. +++-+.|+ +++. ....+++++.+ +. +..
T Consensus 133 ~~~~~igiIG~G~~g~~~a~~l~~~~-----g~~~V~v~-dr~~----------~~~~~l~~~~~~~~~---~~~----- 188 (312)
T 2i99_A 133 PSSEVLCILGAGVQAYSHYEIFTEQF-----SFKEVRIW-NRTK----------ENAEKFADTVQGEVR---VCS----- 188 (312)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHC-----CCSEEEEE-CSSH----------HHHHHHHHHSSSCCE---ECS-----
T ss_pred CCCcEEEEECCcHHHHHHHHHHHHhC-----CCcEEEEE-cCCH----------HHHHHHHHHhhCCeE---EeC-----
Confidence 34679999999999999999988752 34444454 3321 24677888766 43 221
Q ss_pred cHHHHHHHHhcCCcEEEEecC
Q 048078 125 EDAFLSNLRALQPELCITAAY 145 (378)
Q Consensus 125 ~~~~~~~l~~~~~Dliv~~~~ 145 (378)
+ ..+.+ .++|+++++--
T Consensus 189 ~--~~e~v--~~aDiVi~atp 205 (312)
T 2i99_A 189 S--VQEAV--AGADVIITVTL 205 (312)
T ss_dssp S--HHHHH--TTCSEEEECCC
T ss_pred C--HHHHH--hcCCEEEEEeC
Confidence 1 12333 25899988753
No 237
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=38.60 E-value=1.1e+02 Score=30.16 Aligned_cols=111 Identities=12% Similarity=0.002 Sum_probs=66.4
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
..+||++.|.++.+..+.+.|.+. +..|++|.- .+..--...-+....+.++.++.| .+..+.....+..++
T Consensus 234 ~g~~vaVqGfGnVG~~~a~~L~e~------GakvVavsD-~~G~i~dp~Gld~~~l~~~~~~~g-~i~~y~~a~~i~~~e 305 (440)
T 3aog_A 234 EGARVAIQGFGNVGNAAARAFHDH------GARVVAVQD-HTGTVYNEAGIDPYDLLRHVQEFG-GVRGYPKAEPLPAAD 305 (440)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT------TCEEEEEEC-SSCEEECTTCCCHHHHHHHHHHTS-SSTTCTTSEECCHHH
T ss_pred cCCEEEEeccCHHHHHHHHHHHHC------CCEEEEEEc-CCcEEECCCCCCHHHHHHHHHhcC-CcccCCCceEcCchh
Confidence 458999999999999898888875 577877653 210000001124456778887776 211010011122223
Q ss_pred HHHHHHhcCCcEEEEecCCCcCChhhhcCCCCceEEEccCCCCC
Q 048078 128 FLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPL 171 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~~~~ilp~~il~~~~~g~iNiHpSlLP~ 171 (378)
+-..++|+++=++....|..+-....+.+ +-+=.+-.|-
T Consensus 306 ----i~~~~~DIlvPcA~~n~i~~~na~~l~ak-~VvEgAN~p~ 344 (440)
T 3aog_A 306 ----FWGLPVEFLVPAALEKQITEQNAWRIRAR-IVAEGANGPT 344 (440)
T ss_dssp ----HTTCCCSEEEECSSSSCBCTTTGGGCCCS-EEECCSSSCB
T ss_pred ----hhcCCCcEEEecCCcCccchhhHHHcCCc-EEEecCcccc
Confidence 33578999999999888877776665433 4444455553
No 238
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=38.52 E-value=19 Score=33.69 Aligned_cols=37 Identities=14% Similarity=0.243 Sum_probs=30.1
Q ss_pred CCceEEEEe-cCcchHHHHHHHHHccCCCCCCceEEEEEcCCC
Q 048078 48 RKKPLVFLG-SPQVSVNVLDALFNASSSPDSIFEVAAIVTQPP 89 (378)
Q Consensus 48 ~~~rIvf~G-s~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~ 89 (378)
+++||++.| ++..+..+++.+.+. .++++++++..++
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~~-----~~~eLvg~vd~~~ 57 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQRR-----KDVELCAVLVRKG 57 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHTC-----SSEEEEEEBCCTT
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhC-----CCCEEEEEEecCC
Confidence 478999999 999998898888764 3799999987653
No 239
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=38.45 E-value=23 Score=32.70 Aligned_cols=35 Identities=11% Similarity=0.212 Sum_probs=29.4
Q ss_pred CceEEEEe-cCcchHHHHHHHHHccCCCCCCceEEEEEcCC
Q 048078 49 KKPLVFLG-SPQVSVNVLDALFNASSSPDSIFEVAAIVTQP 88 (378)
Q Consensus 49 ~~rIvf~G-s~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~ 88 (378)
++||+++| ++..+..+++.|.+. .++++++++...
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~-----~~~eLv~~~d~~ 42 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAA-----PDATLVGALDRT 42 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHC-----TTEEEEEEBCCT
T ss_pred ccEEEEECCCCHHHHHHHHHHHhC-----CCCEEEEEEEec
Confidence 68999999 899888888888775 379999998754
No 240
>1u2p_A Ptpase, low molecular weight protein-tyrosine- phosphatase; hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 1u2q_A
Probab=38.27 E-value=1.7e+02 Score=24.21 Aligned_cols=86 Identities=10% Similarity=0.157 Sum_probs=46.3
Q ss_pred CCceEEEEecCcchHH-----HHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCC
Q 048078 48 RKKPLVFLGSPQVSVN-----VLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPER 122 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~-----~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~ 122 (378)
+++||+|+-+++..-+ .|+.+++.... ...++|..-=|.+.. .| . .......+.++++||+.. ..+..
T Consensus 3 ~~~~VLFVC~gN~cRSpmAEal~~~~~~~~gl-~~~~~v~SAGt~~~~-~G--~-~~~p~a~~~l~~~Gid~s--~~ar~ 75 (163)
T 1u2p_A 3 DPLHVTFVCTGNICRSPMAEKMFAQQLRHRGL-GDAVRVTSAGTGNWH-VG--S-CADERAAGVLRAHGYPTD--HRAAQ 75 (163)
T ss_dssp -CEEEEEEESSSSSHHHHHHHHHHHHHHHTTC-TTTEEEEEEESSCTT-TT--C-CCCHHHHHHHHHTTCCCC--CCCCB
T ss_pred CCCEEEEEcCCcHhHHHHHHHHHHHHHHHCCC-CCcEEEEecccCCCc-CC--C-CCCHHHHHHHHHcCcCCC--ceeeE
Confidence 3689999998885443 44444432111 112555433333210 01 1 123456788889999953 34455
Q ss_pred CCcHHHHHHHHhcCCcEEEEecCCC
Q 048078 123 AGEDAFLSNLRALQPELCITAAYGN 147 (378)
Q Consensus 123 ~~~~~~~~~l~~~~~Dliv~~~~~~ 147 (378)
+..+.+ .. |+||++.-.+
T Consensus 76 l~~~~~------~~-DlIi~Md~~~ 93 (163)
T 1u2p_A 76 VGTEHL------AA-DLLVALDRNH 93 (163)
T ss_dssp CCHHHH------TS-SEEEESSHHH
T ss_pred CChhhc------cC-CEEEEeCHHH
Confidence 543322 36 9999986543
No 241
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=38.07 E-value=31 Score=34.76 Aligned_cols=74 Identities=12% Similarity=0.169 Sum_probs=44.8
Q ss_pred CCCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHC-CCCCceecCCCCCC
Q 048078 46 VSRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDR-GFPADLIFTPERAG 124 (378)
Q Consensus 46 ~~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~-gIp~~~v~~~~~~~ 124 (378)
...+..|+++|.+.++....+.|.+. +++++.|=.+++ ..+.+.+. |++ ++.- +..
T Consensus 124 ~~~~~hviI~G~g~~g~~la~~L~~~------~~~vvvid~~~~-------------~~~~~~~~~~~~---~i~G-d~~ 180 (565)
T 4gx0_A 124 DDTRGHILIFGIDPITRTLIRKLESR------NHLFVVVTDNYD-------------QALHLEEQEGFK---VVYG-SPT 180 (565)
T ss_dssp TTCCSCEEEESCCHHHHHHHHHTTTT------TCCEEEEESCHH-------------HHHHHHHSCSSE---EEES-CTT
T ss_pred cccCCeEEEECCChHHHHHHHHHHHC------CCCEEEEECCHH-------------HHHHHHHhcCCe---EEEe-CCC
Confidence 34578999999999998888888664 566655533322 23344455 887 3332 334
Q ss_pred cHHHHHHHHhcCCcEEEE
Q 048078 125 EDAFLSNLRALQPELCIT 142 (378)
Q Consensus 125 ~~~~~~~l~~~~~Dliv~ 142 (378)
+++.++.+.-.++|.+|+
T Consensus 181 ~~~~L~~a~i~~a~~vi~ 198 (565)
T 4gx0_A 181 DAHVLAGLRVAAARSIIA 198 (565)
T ss_dssp CHHHHHHTTGGGCSEEEE
T ss_pred CHHHHHhcCcccCCEEEE
Confidence 455555554455665554
No 242
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=38.06 E-value=58 Score=29.96 Aligned_cols=42 Identities=14% Similarity=0.273 Sum_probs=28.1
Q ss_pred HCCCCCceecCCCCCCcHHHHHHHHhcCCcEEEEecCCCcCChhhhc
Q 048078 109 DRGFPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNILPSKFLN 155 (378)
Q Consensus 109 ~~gIp~~~v~~~~~~~~~~~~~~l~~~~~Dliv~~~~~~ilp~~il~ 155 (378)
+.|.+ +......+.+++.+.+++.++|++|+-+|. ++.+..+
T Consensus 45 ~~g~~---v~~l~~~d~~~~~~~l~~~~~d~lIvD~Y~--~~~~~~~ 86 (282)
T 3hbm_A 45 EIPYP---VYELSSESIYELINLIKEEKFELLIIDHYG--ISVDDEK 86 (282)
T ss_dssp GCCSC---EEECSSSCHHHHHHHHHHHTCSEEEEECTT--CCHHHHH
T ss_pred HCCCe---EEEcCccCHHHHHHHHHhCCCCEEEEECCC--CCHHHHH
Confidence 34777 332222344678888999999999999984 5555544
No 243
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=37.29 E-value=43 Score=30.40 Aligned_cols=73 Identities=8% Similarity=0.126 Sum_probs=40.7
Q ss_pred ceEEEEe-cCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcH-H
Q 048078 50 KPLVFLG-SPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGED-A 127 (378)
Q Consensus 50 ~rIvf~G-s~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~-~ 127 (378)
|+|++.| ++.++..+.+.|++. +++|+++.-.+.... ..+ ..++. +... ++.+. .
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~-----------~~~--~~~~~---~~~~-D~~~~~~ 58 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDE------GLSVVVVDNLQTGHE-----------DAI--TEGAK---FYNG-DLRDKAF 58 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEECCSSCCG-----------GGS--CTTSE---EEEC-CTTCHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHhC------CCEEEEEeCCCcCch-----------hhc--CCCcE---EEEC-CCCCHHH
Confidence 6899998 455666677888875 578776542221110 000 01343 3322 34444 4
Q ss_pred HHHHHHhcCCcEEEEecC
Q 048078 128 FLSNLRALQPELCITAAY 145 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~~ 145 (378)
+.+.+++.++|++|-++.
T Consensus 59 ~~~~~~~~~~d~vih~a~ 76 (330)
T 2c20_A 59 LRDVFTQENIEAVMHFAA 76 (330)
T ss_dssp HHHHHHHSCEEEEEECCC
T ss_pred HHHHHhhcCCCEEEECCc
Confidence 445566568999887664
No 244
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=37.20 E-value=1.3e+02 Score=26.65 Aligned_cols=79 Identities=14% Similarity=0.125 Sum_probs=40.4
Q ss_pred CceEEEEec-CcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcH-
Q 048078 49 KKPLVFLGS-PQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGED- 126 (378)
Q Consensus 49 ~~rIvf~Gs-~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~- 126 (378)
..+|++.|. +.++..+.+.|++. +++|+++.-+++.. ..+.+..++.+..+. ++. -++.+.
T Consensus 34 ~k~vlITGasggIG~~la~~L~~~------G~~V~~~~r~~~~~---------~~~~~~~~~~~~~~~-~~~-~Dl~~~~ 96 (279)
T 3ctm_A 34 GKVASVTGSSGGIGWAVAEAYAQA------GADVAIWYNSHPAD---------EKAEHLQKTYGVHSK-AYK-CNISDPK 96 (279)
T ss_dssp TCEEEETTTTSSHHHHHHHHHHHH------TCEEEEEESSSCCH---------HHHHHHHHHHCSCEE-EEE-CCTTCHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC------CCEEEEEeCCHHHH---------HHHHHHHHhcCCcce-EEE-eecCCHH
Confidence 456777774 44666777888875 57766554322210 123333444454432 222 233333
Q ss_pred HHHHHHHh-----cCCcEEEEec
Q 048078 127 AFLSNLRA-----LQPELCITAA 144 (378)
Q Consensus 127 ~~~~~l~~-----~~~Dliv~~~ 144 (378)
++.+.+++ -.+|++|..+
T Consensus 97 ~~~~~~~~~~~~~g~id~li~~A 119 (279)
T 3ctm_A 97 SVEETISQQEKDFGTIDVFVANA 119 (279)
T ss_dssp HHHHHHHHHHHHHSCCSEEEECG
T ss_pred HHHHHHHHHHHHhCCCCEEEECC
Confidence 33333333 2589888765
No 245
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=37.14 E-value=39 Score=32.14 Aligned_cols=28 Identities=25% Similarity=0.349 Sum_probs=23.1
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEE
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVA 82 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~ 82 (378)
.+||+|+|.+.++......|.+. +++|.
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~------G~~V~ 35 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAA------NHSVF 35 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHT------TCCEE
T ss_pred CCEEEEEeecHHHHHHHHHHHHC------CCEEE
Confidence 46899999999999999998875 46654
No 246
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=37.01 E-value=1.5e+02 Score=27.21 Aligned_cols=105 Identities=12% Similarity=0.059 Sum_probs=51.7
Q ss_pred CceEEEEecCcc----hHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCc-eecCC-CC
Q 048078 49 KKPLVFLGSPQV----SVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPAD-LIFTP-ER 122 (378)
Q Consensus 49 ~~rIvf~Gs~~~----a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~-~v~~~-~~ 122 (378)
+|||+++..... ..+.++.|.+. .++++..+++.... ....+....+|+.+. .+... ..
T Consensus 5 mmkIl~v~~~~~~~~~~~~l~~~L~~~-----~g~~v~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~ 69 (376)
T 1v4v_A 5 MKRVVLAFGTRPEATKMAPVYLALRGI-----PGLKPLVLLTGQHR----------EQLRQALSLFGIQEDRNLDVMQER 69 (376)
T ss_dssp CEEEEEEECSHHHHHHHHHHHHHHHTS-----TTEEEEEEECSSCH----------HHHHHHHHTTTCCCSEECCCCSSC
T ss_pred ceEEEEEEeccHHHHHHHHHHHHHHhC-----CCCceEEEEcCCcH----------HHHHHHHHHcCCCcccccccCCCC
Confidence 478988874421 11233444321 25787767664211 123344556777632 11111 11
Q ss_pred CCc--------HHHHHHHHhcCCcEEEEecCC-CcCChhhh-cCCCCceEEEccCC
Q 048078 123 AGE--------DAFLSNLRALQPELCITAAYG-NILPSKFL-NIPPMGTVNIHPSL 168 (378)
Q Consensus 123 ~~~--------~~~~~~l~~~~~Dliv~~~~~-~ilp~~il-~~~~~g~iNiHpSl 168 (378)
.+- ..+.+.+++.+||++++.+.. ..++..+. ...+..++.+|.++
T Consensus 70 ~~~~~~~~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~ 125 (376)
T 1v4v_A 70 QALPDLAARILPQAARALKEMGADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGL 125 (376)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTCSEEEEESSCHHHHHHHHHHHHTTCCEEEETCCC
T ss_pred ccHHHHHHHHHHHHHHHHHHcCCCEEEEeCChHHHHHHHHHHHHhCCCEEEEeCCC
Confidence 110 134567788899999997642 12221121 12233467777765
No 247
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=36.80 E-value=98 Score=29.68 Aligned_cols=26 Identities=15% Similarity=0.199 Sum_probs=18.7
Q ss_pred CcCChhhhcCCCCceEEEccCCCCCCCC
Q 048078 147 NILPSKFLNIPPMGTVNIHPSLLPLYRG 174 (378)
Q Consensus 147 ~ilp~~il~~~~~g~iNiHpSlLP~yRG 174 (378)
+.|..++++..+-.++-+||. |.+||
T Consensus 250 y~vt~ell~~ak~dai~MHcL--Pa~Rg 275 (355)
T 4a8p_A 250 YQVNQEMMDRAGANCKFMHCL--PATRG 275 (355)
T ss_dssp TCBCHHHHHHHCTTCEEEECS--CCCBT
T ss_pred cccCHHHHHhcCCCcEEECCC--CCCCC
Confidence 456667776666678999984 77765
No 248
>1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=36.52 E-value=16 Score=35.54 Aligned_cols=35 Identities=11% Similarity=0.130 Sum_probs=27.4
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCC
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPP 89 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~ 89 (378)
..||+++|.+..+...++++.+. ++++++|.+.++
T Consensus 2 ~k~ilI~g~g~~~~~~~~a~~~~------G~~vv~v~~~~~ 36 (451)
T 1ulz_A 2 VNKVLVANRGEIAVRIIRACKEL------GIPTVAIYNEVE 36 (451)
T ss_dssp CSSEEECCCHHHHHHHHHHHHHH------TCCEEEEECGGG
T ss_pred CceEEEECCcHHHHHHHHHHHHc------CCeEEEEechhh
Confidence 35899999988888888888774 688888876544
No 249
>2qk4_A Trifunctional purine biosynthetic protein adenosi; purine synthesis, enzyme, protein-ATP complex, structural GE structural genomics consortium, SGC; HET: ATP; 2.45A {Homo sapiens}
Probab=36.33 E-value=88 Score=30.27 Aligned_cols=39 Identities=10% Similarity=0.061 Sum_probs=19.5
Q ss_pred CCCCCCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEc
Q 048078 43 AFSVSRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVT 86 (378)
Q Consensus 43 ~~~~~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt 86 (378)
..+..+++||+++|++.........+.+. .+++++.+..
T Consensus 18 ~~~~~m~~~IlIlG~g~r~~al~~~~a~~-----~g~~~v~~~~ 56 (452)
T 2qk4_A 18 LYFQSMAARVLIIGSGGREHTLAWKLAQS-----HHVKQVLVAP 56 (452)
T ss_dssp ----CCSEEEEEEECSHHHHHHHHHHTTC-----TTEEEEEEEE
T ss_pred ccccccCcEEEEECCCHHHHHHHHHHHhc-----CCCCEEEEEC
Confidence 33344578999999984222222333332 3566555543
No 250
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=36.06 E-value=1.3e+02 Score=27.87 Aligned_cols=48 Identities=13% Similarity=0.087 Sum_probs=25.7
Q ss_pred HHHHHHhcCCcEEEEecCCCcCChhhhcCCCCceEEEccCCCCCCCCch
Q 048078 128 FLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAA 176 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~~~~ilp~~il~~~~~g~iNiHpSlLP~yRG~~ 176 (378)
+++.+++.+||++|.-.+.. ...-+-.......+.+..+....+.+..
T Consensus 120 l~~~~~~~~pD~Vv~d~~~~-~~~~~A~~~gip~~~~~~~~~~~~~~~~ 167 (400)
T 4amg_A 120 ALRTARSWRPDLVVHTPTQG-AGPLTAAALQLPCVELPLGPADSEPGLG 167 (400)
T ss_dssp HHHHHHHHCCSEEEECTTCT-HHHHHHHHTTCCEEECCSSTTTCCHHHH
T ss_pred HHHHHHhcCCCEEEECcchH-HHHHHHHHcCCCceeecccccccccchh
Confidence 44667788999998765421 1111222233345555555555554443
No 251
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=35.68 E-value=1.2e+02 Score=26.97 Aligned_cols=74 Identities=12% Similarity=0.035 Sum_probs=42.3
Q ss_pred CceEEEEec-CcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCc-H
Q 048078 49 KKPLVFLGS-PQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGE-D 126 (378)
Q Consensus 49 ~~rIvf~Gs-~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~-~ 126 (378)
.+||++.|. +.++..+.+.|++.. .+++|+++.-.+... .+ . .++. +... ++.+ +
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~----~g~~V~~~~r~~~~~----------~~---~--~~~~---~~~~-D~~d~~ 58 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLY----GTENVIASDIRKLNT----------DV---V--NSGP---FEVV-NALDFN 58 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHH----CGGGEEEEESCCCSC----------HH---H--HSSC---EEEC-CTTCHH
T ss_pred CceEEEECCccHHHHHHHHHHHHhC----CCCEEEEEcCCCccc----------cc---c--CCCc---eEEe-cCCCHH
Confidence 478999996 545666677887741 146777665332210 11 1 2454 3332 3333 4
Q ss_pred HHHHHHHhcCCcEEEEecC
Q 048078 127 AFLSNLRALQPELCITAAY 145 (378)
Q Consensus 127 ~~~~~l~~~~~Dliv~~~~ 145 (378)
.+.+.+++.++|++|-++.
T Consensus 59 ~~~~~~~~~~~d~vih~a~ 77 (312)
T 2yy7_A 59 QIEHLVEVHKITDIYLMAA 77 (312)
T ss_dssp HHHHHHHHTTCCEEEECCC
T ss_pred HHHHHHhhcCCCEEEECCc
Confidence 4556666668999987764
No 252
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=35.58 E-value=78 Score=28.79 Aligned_cols=30 Identities=7% Similarity=0.070 Sum_probs=20.2
Q ss_pred CceEEEEecCc-chHHHHHHHHHccCCCCCCceEEEE
Q 048078 49 KKPLVFLGSPQ-VSVNVLDALFNASSSPDSIFEVAAI 84 (378)
Q Consensus 49 ~~rIvf~Gs~~-~a~~~L~~L~~~~~~~~~~~ei~~V 84 (378)
..+|++.|... ++..+.+.|++. +++|+++
T Consensus 31 gk~vlVTGas~gIG~~la~~l~~~------G~~V~~~ 61 (301)
T 3tjr_A 31 GRAAVVTGGASGIGLATATEFARR------GARLVLS 61 (301)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT------TCEEEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC------CCEEEEE
Confidence 34688888544 666777888875 5776544
No 253
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=35.38 E-value=56 Score=29.33 Aligned_cols=65 Identities=8% Similarity=0.090 Sum_probs=42.0
Q ss_pred HHHHHHHHCCCCCceecCCCCCCcHHHHHHHHhcCCcEEEEecCCCcC---------ChhhhcCCCCceEEEccC
Q 048078 102 PVAQYALDRGFPADLIFTPERAGEDAFLSNLRALQPELCITAAYGNIL---------PSKFLNIPPMGTVNIHPS 167 (378)
Q Consensus 102 ~v~~~A~~~gIp~~~v~~~~~~~~~~~~~~l~~~~~Dliv~~~~~~il---------p~~il~~~~~g~iNiHpS 167 (378)
.+.++++++|++++......+ -.+++++..++.++|++|+..+++-- ...++...+..++-+|+.
T Consensus 218 ~~~~~l~~~~~~~~~~~~~g~-~~~~I~~~a~~~~~dLlV~G~~~~~~~~~~~~Gs~~~~vl~~~~~pvLvv~~~ 291 (294)
T 3loq_A 218 VMEEVIGAEGIEVHVHIESGT-PHKAILAKREEINATTIFMGSRGAGSVMTMILGSTSESVIRRSPVPVFVCKRG 291 (294)
T ss_dssp HHHHHHHHTTCCEEEEEECSC-HHHHHHHHHHHTTCSEEEEECCCCSCHHHHHHHCHHHHHHHHCSSCEEEECSC
T ss_pred HHHHHHHHcCCcEEEEEecCC-HHHHHHHHHHhcCcCEEEEeCCCCCCccceeeCcHHHHHHhcCCCCEEEECCC
Confidence 466777889999543332222 24567788888999999998886532 244555555556666653
No 254
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=34.60 E-value=29 Score=32.98 Aligned_cols=34 Identities=24% Similarity=0.331 Sum_probs=26.9
Q ss_pred CceEEEEe-cCcchHHHHHHHHHccCCCCCCceEEEEEcC
Q 048078 49 KKPLVFLG-SPQVSVNVLDALFNASSSPDSIFEVAAIVTQ 87 (378)
Q Consensus 49 ~~rIvf~G-s~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~ 87 (378)
++||+++| ++..+...++.|.+. ..+++++|...
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~-----p~~elv~v~s~ 38 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSH-----PYLEVKQVTSR 38 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTC-----TTEEEEEEBCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHcC-----CCcEEEEEECc
Confidence 68999999 898888888888754 35788887663
No 255
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=34.52 E-value=89 Score=27.97 Aligned_cols=31 Identities=16% Similarity=0.272 Sum_probs=19.6
Q ss_pred CCceEEEEecCc-chHHHHHHHHHccCCCCCCceEEEE
Q 048078 48 RKKPLVFLGSPQ-VSVNVLDALFNASSSPDSIFEVAAI 84 (378)
Q Consensus 48 ~~~rIvf~Gs~~-~a~~~L~~L~~~~~~~~~~~ei~~V 84 (378)
...+|++.|... ++..+.+.|++. +++|+++
T Consensus 43 ~~k~vlITGasggIG~~la~~L~~~------G~~V~~~ 74 (285)
T 2c07_A 43 ENKVALVTGAGRGIGREIAKMLAKS------VSHVICI 74 (285)
T ss_dssp SSCEEEEESTTSHHHHHHHHHHTTT------SSEEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHc------CCEEEEE
Confidence 345788888554 555666667653 5777663
No 256
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=34.37 E-value=19 Score=33.56 Aligned_cols=71 Identities=11% Similarity=0.110 Sum_probs=43.2
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHHH
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAF 128 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~~ 128 (378)
+.+|+++|.+.++....+.|.+. ++ ++ ++ ..+. ..+ + +++.|++ +..- +..+++.
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~------g~-v~-vi-d~~~----------~~~-~-~~~~~~~---~i~g-d~~~~~~ 169 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGS------EV-FV-LA-EDEN----------VRK-K-VLRSGAN---FVHG-DPTRVSD 169 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGS------CE-EE-EE-SCGG----------GHH-H-HHHTTCE---EEES-CTTSHHH
T ss_pred cCCEEEECCcHHHHHHHHHHHhC------Cc-EE-EE-eCCh----------hhh-h-HHhCCcE---EEEe-CCCCHHH
Confidence 45899999999888887777653 45 43 33 2221 123 3 5668887 4433 3445666
Q ss_pred HHHHHhcCCcEEEEec
Q 048078 129 LSNLRALQPELCITAA 144 (378)
Q Consensus 129 ~~~l~~~~~Dliv~~~ 144 (378)
++...-.++|.++++.
T Consensus 170 L~~a~i~~a~~vi~~~ 185 (336)
T 1lnq_A 170 LEKANVRGARAVIVDL 185 (336)
T ss_dssp HHHTCSTTEEEEEECC
T ss_pred HHhcChhhccEEEEcC
Confidence 6555445788877653
No 257
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=34.09 E-value=1e+02 Score=26.39 Aligned_cols=34 Identities=21% Similarity=0.223 Sum_probs=23.4
Q ss_pred CCceEEEEe-cCcchHHHHHHHHHccCCCCCCceEEEEE
Q 048078 48 RKKPLVFLG-SPQVSVNVLDALFNASSSPDSIFEVAAIV 85 (378)
Q Consensus 48 ~~~rIvf~G-s~~~a~~~L~~L~~~~~~~~~~~ei~~Vv 85 (378)
..++|++.| ++.++..+.+.|++.. .+++|+++.
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~----~g~~V~~~~ 37 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGS----DKFVAKGLV 37 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTT----TTCEEEEEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcC----CCcEEEEEE
Confidence 357899999 5556777778888751 147777654
No 258
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=33.93 E-value=96 Score=28.36 Aligned_cols=63 Identities=17% Similarity=0.205 Sum_probs=40.5
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHHH
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAF 128 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~~ 128 (378)
..|++++|++..+..+...|.+. +.+| .|+ ++... ...++| +.|+. +...++.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~------G~~v-~V~-nRt~~----------ka~~la-~~~~~---~~~~~~l----- 170 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQ------GLQV-SVL-NRSSR----------GLDFFQ-RLGCD---CFMEPPK----- 170 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEE-EEE-CSSCT----------THHHHH-HHTCE---EESSCCS-----
T ss_pred CCEEEEECCCHHHHHHHHHHHHC------CCEE-EEE-eCCHH----------HHHHHH-HCCCe---EecHHHh-----
Confidence 56999999998888888999875 4444 333 44321 256777 77765 3332221
Q ss_pred HHHHHhcCCcEEEEec
Q 048078 129 LSNLRALQPELCITAA 144 (378)
Q Consensus 129 ~~~l~~~~~Dliv~~~ 144 (378)
. ++|++|.+.
T Consensus 171 ----~--~~DiVInaT 180 (269)
T 3phh_A 171 ----S--AFDLIINAT 180 (269)
T ss_dssp ----S--CCSEEEECC
T ss_pred ----c--cCCEEEEcc
Confidence 1 789888654
No 259
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=33.27 E-value=26 Score=31.08 Aligned_cols=42 Identities=10% Similarity=0.180 Sum_probs=24.8
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCC
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRD 93 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~g 93 (378)
+.+||+++|.+..+...++.+... ..++++++++...+...|
T Consensus 84 ~~~rV~IIGAG~~G~~La~~~~~~----~~g~~iVg~~D~dp~k~g 125 (215)
T 2vt3_A 84 EMTDVILIGVGNLGTAFLHYNFTK----NNNTKISMAFDINESKIG 125 (215)
T ss_dssp ---CEEEECCSHHHHHHHHCC----------CCEEEEEESCTTTTT
T ss_pred CCCEEEEEccCHHHHHHHHHHhcc----cCCcEEEEEEeCCHHHHH
Confidence 457999999998766665532221 236899999976555444
No 260
>3o3m_B Beta subunit 2-hydroxyacyl-COA dehydratase; atypical dehydratase, lyase; 1.82A {Clostridium difficile} PDB: 3o3n_B* 3o3o_B
Probab=33.25 E-value=1.9e+02 Score=27.64 Aligned_cols=91 Identities=14% Similarity=0.120 Sum_probs=51.8
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCc-cCChHHHHHHHHC-C-CCCceec-CCCCC
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRK-VLPSPVAQYALDR-G-FPADLIF-TPERA 123 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~-~~~~~v~~~A~~~-g-Ip~~~v~-~~~~~ 123 (378)
.+.||++.|+.-.....++.| +. .+..||+-.+......-+..- ....++..+|+++ + ++.. +. .|...
T Consensus 228 ~~~RI~~~G~~~~~~~l~~~l-e~-----~Ga~VV~~~~~~g~r~~~~~v~~~~dpl~~lA~~yl~~~~c~-~~~~p~~~ 300 (385)
T 3o3m_B 228 SGKKVLLTGILADSKDILDIL-ED-----NNISVVADDLAQETRQFRTDVPAGDDALERLARQWSNIEGCS-LAYDPKKK 300 (385)
T ss_dssp SSEEEEEEESCCCCHHHHHHH-HH-----TTEEEEEEEETTTGGGTSSCCCCCSCHHHHHHHHHHHCCSCT-TSCCTTCT
T ss_pred CCceEEEECCCCCcHHHHHHH-HH-----CCCEEEEECccccccccccCCCCCccHHHHHHHHHhcCCCCc-cccCcHHH
Confidence 478999999987666555554 43 267776644322211111100 1235888999887 2 2311 22 23322
Q ss_pred CcHHHHHHHHhcCCcEEEEecC
Q 048078 124 GEDAFLSNLRALQPELCITAAY 145 (378)
Q Consensus 124 ~~~~~~~~l~~~~~Dliv~~~~ 145 (378)
.-+.+.+.+++.++|-+|....
T Consensus 301 R~~~i~~~~~~~~~DGvI~~~~ 322 (385)
T 3o3m_B 301 RGSLIVDEVKKKDIDGVIFCMM 322 (385)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHHHHhCCCCEEEEecc
Confidence 2345667788999998887653
No 261
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=33.23 E-value=1.2e+02 Score=26.72 Aligned_cols=31 Identities=6% Similarity=0.053 Sum_probs=20.6
Q ss_pred CCceEEEEecC-cchHHHHHHHHHccCCCCCCceEEEE
Q 048078 48 RKKPLVFLGSP-QVSVNVLDALFNASSSPDSIFEVAAI 84 (378)
Q Consensus 48 ~~~rIvf~Gs~-~~a~~~L~~L~~~~~~~~~~~ei~~V 84 (378)
...++++.|.. .++..+.+.|++. +++|+++
T Consensus 12 ~~k~vlVTGas~gIG~~ia~~l~~~------G~~V~~~ 43 (267)
T 1iy8_A 12 TDRVVLITGGGSGLGRATAVRLAAE------GAKLSLV 43 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT------TCEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC------CCEEEEE
Confidence 34578888744 4666777888875 5776554
No 262
>3au8_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH binding; HET: NDP; 1.86A {Plasmodium falciparum} PDB: 3au9_A* 3aua_A*
Probab=33.03 E-value=83 Score=31.37 Aligned_cols=59 Identities=15% Similarity=0.188 Sum_probs=38.8
Q ss_pred CCceEEEEec-CcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCcee
Q 048078 48 RKKPLVFLGS-PQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLI 117 (378)
Q Consensus 48 ~~~rIvf~Gs-~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v 117 (378)
++.||+++|| |+++..+|+-+.+.... ...++|+++.....- .-+.+.|++++-.+.++
T Consensus 76 ~mk~I~ILGSTGSIGtqTLdVi~~~p~~-pd~f~V~aLaAg~Nv----------~lL~eQ~~ef~P~~v~v 135 (488)
T 3au8_A 76 KPINVAIFGSTGSIGTNALNIIRECNKI-ENVFNVKALYVNKSV----------NELYEQAREFLPEYLCI 135 (488)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHHHH-SCCEEEEEEEESSCH----------HHHHHHHHHHCCSEEEE
T ss_pred cceEEEEEccCcHHHHHHHHHHHcccCC-CCeEEEEEEEcCCCH----------HHHHHHHHHcCCCEEEE
Confidence 3457999995 55777788877662000 125999998875432 35778888888775543
No 263
>1l7b_A DNA ligase; BRCT, autostructure, structural genomics, NESG, PSI, protein structure initiative, northeast structural genomics consortium; HET: DNA; NMR {Thermus thermophilus} SCOP: c.15.1.2
Probab=32.98 E-value=62 Score=24.60 Aligned_cols=71 Identities=17% Similarity=0.156 Sum_probs=41.0
Q ss_pred CCCceEEEEecCcchHHHHHHHHHccCCC---CCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCC
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNASSSP---DSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERA 123 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~---~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~ 123 (378)
-.-++|+|-|+-.-+..-++.+++...-. .-.-....||+..+ .|. | .+.|+++||| |+
T Consensus 8 l~G~~~v~TG~l~~~R~e~~~~i~~~Gg~v~~sVskkt~~LV~g~~--~gs--K------~~kA~~lgI~---Ii----- 69 (92)
T 1l7b_A 8 LKGLTFVITGELSRPREEVKALLRRLGAKVTDSVSRKTSYLVVGEN--PGS--K------LEKARALGVP---TL----- 69 (92)
T ss_dssp STTCEEECSTTTTSCHHHHHHHHHHTTCEEESCCSSSCCCBEECSS--SST--T------HHHHHCSSSC---CE-----
T ss_pred cCCcEEEEecCCCCCHHHHHHHHHHcCCEEeCcccCCeeEEEeCCC--CCh--H------HHHHHHcCCc---EE-----
Confidence 44678888887655677788887753210 00012223343322 121 1 5779999999 54
Q ss_pred CcHHHHHHHHhc
Q 048078 124 GEDAFLSNLRAL 135 (378)
Q Consensus 124 ~~~~~~~~l~~~ 135 (378)
++++|++.|.+.
T Consensus 70 ~E~~f~~~l~~~ 81 (92)
T 1l7b_A 70 TEEELYRLLEAR 81 (92)
T ss_dssp EHHHHHHHHHHH
T ss_pred eHHHHHHHHHhc
Confidence 356688877654
No 264
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=32.95 E-value=45 Score=31.37 Aligned_cols=26 Identities=19% Similarity=0.299 Sum_probs=21.1
Q ss_pred CcCChhhhcCCCCceEEEccCCCCCCCC
Q 048078 147 NILPSKFLNIPPMGTVNIHPSLLPLYRG 174 (378)
Q Consensus 147 ~ilp~~il~~~~~g~iNiHpSlLP~yRG 174 (378)
+.|..++++..+-.++-+|| ||.+||
T Consensus 244 y~v~~~~l~~a~~~ai~mH~--lP~~Rg 269 (309)
T 4f2g_A 244 WCVDEEMMSHANSDALFMHC--LPAHRG 269 (309)
T ss_dssp GCBCHHHHTTSCTTCEEEEC--SSCCBT
T ss_pred ceeCHHHHHhcCCCeEEECC--CCCCCC
Confidence 55788888877778999998 478887
No 265
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=32.93 E-value=2e+02 Score=27.14 Aligned_cols=109 Identities=10% Similarity=0.064 Sum_probs=55.1
Q ss_pred CCCCCceEEEEecCc----chHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCC
Q 048078 45 SVSRKKPLVFLGSPQ----VSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTP 120 (378)
Q Consensus 45 ~~~~~~rIvf~Gs~~----~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~ 120 (378)
..+++|||+++.... ...+++++|.+. .++++..++|.... .-..+..+..||...+-+..
T Consensus 21 ~~~~m~ki~~v~Gtr~~~~~~a~li~~l~~~-----~~~~~~~~~tG~h~----------~~~~~~~~~~~i~~~~~l~~ 85 (396)
T 3dzc_A 21 QSNAMKKVLIVFGTRPEAIKMAPLVQQLCQD-----NRFVAKVCVTGQHR----------EMLDQVLELFSITPDFDLNI 85 (396)
T ss_dssp ---CCEEEEEEECSHHHHHHHHHHHHHHHHC-----TTEEEEEEECCSSS----------HHHHHHHHHTTCCCSEECCC
T ss_pred HhCCCCeEEEEEeccHhHHHHHHHHHHHHhC-----CCCcEEEEEecccH----------HHHHHHHHhcCCCCceeeec
Confidence 344566886644322 123344455432 25888778875321 12455667888842211111
Q ss_pred --CCCCc--------HHHHHHHHhcCCcEEEEecCCCc-CChhhh-cCCCCceEEEccCC
Q 048078 121 --ERAGE--------DAFLSNLRALQPELCITAAYGNI-LPSKFL-NIPPMGTVNIHPSL 168 (378)
Q Consensus 121 --~~~~~--------~~~~~~l~~~~~Dliv~~~~~~i-lp~~il-~~~~~g~iNiHpSl 168 (378)
...+- ..+.+.+++.+||++++.+...- ++..+. ...+..++.+|.++
T Consensus 86 ~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ag~ 145 (396)
T 3dzc_A 86 MEPGQTLNGVTSKILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAGL 145 (396)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTTTCCEEEETCCC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHhcCCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCc
Confidence 11110 23456778899999999874322 332221 12334577777765
No 266
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=32.74 E-value=40 Score=28.07 Aligned_cols=31 Identities=26% Similarity=0.429 Sum_probs=23.2
Q ss_pred ceEEEEec-CcchHHHHHHHHHccCCCCCCceEEEEEc
Q 048078 50 KPLVFLGS-PQVSVNVLDALFNASSSPDSIFEVAAIVT 86 (378)
Q Consensus 50 ~rIvf~Gs-~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt 86 (378)
|+|+++|. +.++..+.+.|++. +++|.++.-
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~------g~~V~~~~r 35 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQA------GYEVTVLVR 35 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT------TCEEEEEES
T ss_pred CEEEEEcCCcHHHHHHHHHHHHC------CCeEEEEEe
Confidence 78999996 65677777888875 578776653
No 267
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=32.73 E-value=65 Score=29.93 Aligned_cols=23 Identities=9% Similarity=0.137 Sum_probs=20.5
Q ss_pred CceEEEEecCcchHHHHHHHHHc
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNA 71 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~ 71 (378)
.+||+|+|.|.++....+.|.+.
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~ 55 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRS 55 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHT
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC
Confidence 47999999999999998988875
No 268
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=32.72 E-value=80 Score=29.50 Aligned_cols=32 Identities=19% Similarity=0.232 Sum_probs=23.3
Q ss_pred CceEEEEe-cCcchHHHHHHHHHccCCCCCCceEEEEEc
Q 048078 49 KKPLVFLG-SPQVSVNVLDALFNASSSPDSIFEVAAIVT 86 (378)
Q Consensus 49 ~~rIvf~G-s~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt 86 (378)
+++|++.| |+.++..+.+.|++. +++|.++.-
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~------g~~V~~~~R 37 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAV------GHHVRAQVH 37 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHT------TCCEEEEES
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC------CCEEEEEEC
Confidence 57899999 566677777888874 577776653
No 269
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=32.56 E-value=3e+02 Score=25.38 Aligned_cols=104 Identities=17% Similarity=0.171 Sum_probs=63.4
Q ss_pred CCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHH-HHHHHHCCCCCceecCCCCCCc
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPV-AQYALDRGFPADLIFTPERAGE 125 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v-~~~A~~~gIp~~~v~~~~~~~~ 125 (378)
....+|+++|++..+...+++|.+.. +++-+.|+. +.+. ..+ .++..++|++.+ .. + -
T Consensus 119 ~~~~~v~iIGaG~~a~~~~~al~~~~-----~~~~V~v~~-r~~a---------~~la~~l~~~~g~~~~---~~-~--~ 177 (313)
T 3hdj_A 119 PRSSVLGLFGAGTQGAEHAAQLSARF-----ALEAILVHD-PYAS---------PEILERIGRRCGVPAR---MA-A--P 177 (313)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHS-----CCCEEEEEC-TTCC---------HHHHHHHHHHHTSCEE---EC-C--H
T ss_pred CCCcEEEEECccHHHHHHHHHHHHhC-----CCcEEEEEC-CcHH---------HHHHHHHHHhcCCeEE---Ee-C--H
Confidence 34579999999999999999988742 344444543 3321 112 233334688732 11 1 1
Q ss_pred HHHHHHHHhcCCcEEEEecCC--CcCChhhhcCCCCceEEEccCCCCCCCCchHH
Q 048078 126 DAFLSNLRALQPELCITAAYG--NILPSKFLNIPPMGTVNIHPSLLPLYRGAAPV 178 (378)
Q Consensus 126 ~~~~~~l~~~~~Dliv~~~~~--~ilp~~il~~~~~g~iNiHpSlLP~yRG~~pi 178 (378)
+ +.+ .++|++|++.-. .+++.+.+. +...|+-..|.-|.-|=..|-
T Consensus 178 ~---eav--~~aDIVi~aT~s~~pvl~~~~l~--~G~~V~~vGs~~p~~~El~~~ 225 (313)
T 3hdj_A 178 A---DIA--AQADIVVTATRSTTPLFAGQALR--AGAFVGAIGSSLPHTRELDDE 225 (313)
T ss_dssp H---HHH--HHCSEEEECCCCSSCSSCGGGCC--TTCEEEECCCSSTTCCCCCHH
T ss_pred H---HHH--hhCCEEEEccCCCCcccCHHHcC--CCcEEEECCCCCCchhhcCHH
Confidence 2 233 259999987643 344444433 455788888888888877664
No 270
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=32.51 E-value=1.3e+02 Score=27.46 Aligned_cols=77 Identities=10% Similarity=0.069 Sum_probs=42.3
Q ss_pred CceEEEEec-CcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHH------CCCCCceecCCC
Q 048078 49 KKPLVFLGS-PQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALD------RGFPADLIFTPE 121 (378)
Q Consensus 49 ~~rIvf~Gs-~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~------~gIp~~~v~~~~ 121 (378)
.++|++.|. +.++..+.+.|++. +++|+++.-.+... ...+.+...+ .++. +.. .
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~--------~~~~~~~~~~~~~~~~~~~~---~~~-~ 88 (352)
T 1sb8_A 27 PKVWLITGVAGFIGSNLLETLLKL------DQKVVGLDNFATGH--------QRNLDEVRSLVSEKQWSNFK---FIQ-G 88 (352)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT------TCEEEEEECCSSCC--------HHHHHHHHHHSCHHHHTTEE---EEE-C
T ss_pred CCeEEEECCCcHHHHHHHHHHHHC------CCEEEEEeCCCccc--------hhhHHHHhhhcccccCCceE---EEE-C
Confidence 578999996 44566666788875 57877665332210 0123333322 3444 332 2
Q ss_pred CCCcHH-HHHHHHhcCCcEEEEecC
Q 048078 122 RAGEDA-FLSNLRALQPELCITAAY 145 (378)
Q Consensus 122 ~~~~~~-~~~~l~~~~~Dliv~~~~ 145 (378)
++.+.+ +.+.++ ++|++|-++.
T Consensus 89 Dl~d~~~~~~~~~--~~d~vih~A~ 111 (352)
T 1sb8_A 89 DIRNLDDCNNACA--GVDYVLHQAA 111 (352)
T ss_dssp CTTSHHHHHHHHT--TCSEEEECCS
T ss_pred CCCCHHHHHHHhc--CCCEEEECCc
Confidence 444444 334443 7999887764
No 271
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=32.50 E-value=1.8e+02 Score=26.29 Aligned_cols=94 Identities=17% Similarity=0.166 Sum_probs=57.0
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
...+|+++|.+..+..+.+.|... +.+|. ++ ++.. .. .+.+.+.|+. +... .+
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~------G~~V~-~~-dr~~----------~~-~~~~~~~g~~---~~~~-----~~ 206 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAAL------GAKVK-VG-ARES----------DL-LARIAEMGME---PFHI-----SK 206 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT------TCEEE-EE-ESSH----------HH-HHHHHHTTSE---EEEG-----GG
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhC------CCEEE-EE-ECCH----------HH-HHHHHHCCCe---ecCh-----hh
Confidence 457999999999988888888764 46653 22 3321 11 2334566765 2211 12
Q ss_pred HHHHHHhcCCcEEEEecCCCcCChhhhcCCCCceEEEccCCCC
Q 048078 128 FLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLP 170 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~~~~ilp~~il~~~~~g~iNiHpSlLP 170 (378)
+.+.+ .+.|++++..-..++..+.++..+.+.+=+.-+--|
T Consensus 207 l~~~l--~~aDvVi~~~p~~~i~~~~l~~mk~~~~lin~ar~~ 247 (293)
T 3d4o_A 207 AAQEL--RDVDVCINTIPALVVTANVLAEMPSHTFVIDLASKP 247 (293)
T ss_dssp HHHHT--TTCSEEEECCSSCCBCHHHHHHSCTTCEEEECSSTT
T ss_pred HHHHh--cCCCEEEECCChHHhCHHHHHhcCCCCEEEEecCCC
Confidence 22333 369999988766788888887666554444444433
No 272
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=32.42 E-value=48 Score=30.53 Aligned_cols=80 Identities=9% Similarity=0.096 Sum_probs=41.3
Q ss_pred ceEEEEec-CcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcH-H
Q 048078 50 KPLVFLGS-PQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGED-A 127 (378)
Q Consensus 50 ~rIvf~Gs-~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~-~ 127 (378)
|||++.|. +.++..+.+.|++.. +++|+++.-.+.. ++. ..+.++....++. ++. -++.+. .
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~-----g~~V~~~~r~~~~--~~~-----~~~~~~~~~~~~~---~~~-~Dl~d~~~ 64 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNT-----QDTVVNIDKLTYA--GNL-----ESLSDISESNRYN---FEH-ADICDSAE 64 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHC-----SCEEEEEECCCTT--CCG-----GGGTTTTTCTTEE---EEE-CCTTCHHH
T ss_pred CEEEEECCCchHhHHHHHHHHhcC-----CCeEEEEecCCCC--Cch-----hhhhhhhcCCCeE---EEE-CCCCCHHH
Confidence 68999995 556666778888741 4777765432211 000 0111111111222 222 234444 4
Q ss_pred HHHHHHhcCCcEEEEecC
Q 048078 128 FLSNLRALQPELCITAAY 145 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~~ 145 (378)
+.+.+++.++|++|-++.
T Consensus 65 ~~~~~~~~~~d~vih~A~ 82 (361)
T 1kew_A 65 ITRIFEQYQPDAVMHLAA 82 (361)
T ss_dssp HHHHHHHHCCSEEEECCS
T ss_pred HHHHHhhcCCCEEEECCC
Confidence 445565568999987764
No 273
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=32.21 E-value=46 Score=30.85 Aligned_cols=29 Identities=17% Similarity=0.363 Sum_probs=24.4
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEE
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVA 82 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~ 82 (378)
..|||+|+|.+.++....+.|.+. +++|.
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~------G~~V~ 58 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEA------GYALQ 58 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHT------TCEEE
T ss_pred CCCEEEEECccHHHHHHHHHHHhC------CCeEE
Confidence 468999999999999999998875 57754
No 274
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=32.15 E-value=2.4e+02 Score=26.82 Aligned_cols=102 Identities=15% Similarity=0.086 Sum_probs=55.9
Q ss_pred CCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHC------CCCCceecCC
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDR------GFPADLIFTP 120 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~------gIp~~~v~~~ 120 (378)
-..+||+|+|-..- +...++.... ..++++. +++ |+.- .-+..+.+.|++. |..+. +.
T Consensus 186 l~glkva~vGD~~n---va~Sl~~~l~--~lG~~v~-~~~-P~~~------~~~~~i~~~~~~~a~~~~~g~~~~-~~-- 249 (353)
T 3sds_A 186 LEGLKIAWVGDANN---VLFDLAIAAT--KMGVNVA-VAT-PRGY------EIPSHIVELIQKAREGVQSPGNLT-QT-- 249 (353)
T ss_dssp CTTCEEEEESCCCH---HHHHHHHHHH--HTTCEEE-EEC-CTTC------CCCHHHHHHHHHHHTTCSSCCCEE-EE--
T ss_pred cCCCEEEEECCCch---HHHHHHHHHH--HcCCEEE-EEC-Cccc------CCCHHHHHHHHHhhhhccCCCeEE-EE--
Confidence 35789999998752 3333332110 0256653 333 3321 0134566666543 44522 21
Q ss_pred CCCCcHHHHHHHHhcCCcEEEEecC-----------------CCcCChhhhcC--CCCceEEEccCCCCCCC
Q 048078 121 ERAGEDAFLSNLRALQPELCITAAY-----------------GNILPSKFLNI--PPMGTVNIHPSLLPLYR 173 (378)
Q Consensus 121 ~~~~~~~~~~~l~~~~~Dliv~~~~-----------------~~ilp~~il~~--~~~g~iNiHpSlLP~yR 173 (378)
.+ +.+.+ .++|++.+-.| .+.|..++++. .+-.++-+||. |.+|
T Consensus 250 ~d-----~~eav--~~aDVvytd~w~smg~E~~~~~r~~~~~~y~vt~ell~~~~ak~~ai~MHcL--P~~~ 312 (353)
T 3sds_A 250 TV-----PEVAV--KDADVIVTDTWISMGQETEKIKRLEAFKDFKVTSELAKRGGAKENWKFMHCL--PRHP 312 (353)
T ss_dssp SC-----HHHHT--TTCSEEEECCC--------CHHHHHHTTTCCBCHHHHHHHTCCTTCEEEECS--CCCT
T ss_pred CC-----HHHHh--cCCCEEEeCCccCCchhhHHHHHHHHhhCceecHHHHhhcccCCCcEEECCC--CCCC
Confidence 11 12233 36888877332 25688888887 67779999996 6654
No 275
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=31.86 E-value=2e+02 Score=27.26 Aligned_cols=24 Identities=4% Similarity=0.088 Sum_probs=19.4
Q ss_pred CCceEEEEecCcchHHHHHHHHHc
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNA 71 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~ 71 (378)
...+|+++|.+..+..+.+.+...
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~ 194 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRL 194 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC
Confidence 467999999998888887777653
No 276
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=31.65 E-value=1.1e+02 Score=29.57 Aligned_cols=100 Identities=13% Similarity=0.024 Sum_probs=57.0
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceec--------C
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIF--------T 119 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~--------~ 119 (378)
.+.||+++|.+..+....+.+... +.+|. ++ ++.. ...+.+.+.|..+..+. .
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~l------Ga~V~-v~-D~~~-----------~~l~~~~~lGa~~~~l~~~~~~~~gy 243 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRL------GAKTT-GY-DVRP-----------EVAEQVRSVGAQWLDLGIDAAGEGGY 243 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHH------TCEEE-EE-CSSG-----------GGHHHHHHTTCEECCCC---------
T ss_pred CCCEEEEECchHHHHHHHHHHHHC------CCEEE-EE-eCCH-----------HHHHHHHHcCCeEEeccccccccccc
Confidence 467999999999888888877664 56643 33 3321 12456667776521110 0
Q ss_pred CCCCCc-------HHHHHHHHhcCCcEEEEec------CCCcCChhhhcCCCCceEEEccCC
Q 048078 120 PERAGE-------DAFLSNLRALQPELCITAA------YGNILPSKFLNIPPMGTVNIHPSL 168 (378)
Q Consensus 120 ~~~~~~-------~~~~~~l~~~~~Dliv~~~------~~~ilp~~il~~~~~g~iNiHpSl 168 (378)
.....+ +.+.+.+ .++|++|.+. -..++.++.++..+-|.+=+--|.
T Consensus 244 a~~~~~~~~~~~~~~l~e~l--~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~ 303 (381)
T 3p2y_A 244 ARELSEAERAQQQQALEDAI--TKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAG 303 (381)
T ss_dssp ----CHHHHHHHHHHHHHHH--TTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTG
T ss_pred hhhhhHHHHhhhHHHHHHHH--hcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeC
Confidence 000001 1122222 4799999753 235788999998776655554443
No 277
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=31.64 E-value=84 Score=28.97 Aligned_cols=79 Identities=19% Similarity=0.218 Sum_probs=39.1
Q ss_pred ceEEEEe-cCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHH-----CCCCCceecCCCCC
Q 048078 50 KPLVFLG-SPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALD-----RGFPADLIFTPERA 123 (378)
Q Consensus 50 ~rIvf~G-s~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~-----~gIp~~~v~~~~~~ 123 (378)
++|++.| ++.++..+.+.|++. +++|+++.-.++.. . ...+..+..+ .++. +.. -++
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~-~------~~~~~~~~~~~~~~~~~~~---~~~-~Dl 64 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLLEK------GYEVHGIKRRASSF-N------TERVDHIYQDPHTCNPKFH---LHY-GDL 64 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT------TCEEEEECC----------------------------CCEE---ECC-CCS
T ss_pred CEEEEECCCChHHHHHHHHHHHC------CCEEEEEECCCccc-c------hHHHHHHhhccccCCCceE---EEE-CCC
Confidence 5789998 455666777888875 57776554222110 0 0011222211 2232 333 334
Q ss_pred Cc-HHHHHHHHhcCCcEEEEecC
Q 048078 124 GE-DAFLSNLRALQPELCITAAY 145 (378)
Q Consensus 124 ~~-~~~~~~l~~~~~Dliv~~~~ 145 (378)
.+ +.+.+.++..++|++|-.+.
T Consensus 65 ~d~~~~~~~~~~~~~d~vih~A~ 87 (372)
T 1db3_A 65 SDTSNLTRILREVQPDEVYNLGA 87 (372)
T ss_dssp SCHHHHHHHHHHHCCSEEEECCC
T ss_pred CCHHHHHHHHHhcCCCEEEECCc
Confidence 44 44556666668999887664
No 278
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=31.42 E-value=39 Score=31.86 Aligned_cols=80 Identities=14% Similarity=-0.001 Sum_probs=44.9
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCC-cHH
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAG-EDA 127 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~-~~~ 127 (378)
.-+|++.|++.++..+++.+... +.+|+++...+. -.++|+++|... ++.....+ .++
T Consensus 190 g~~VlV~G~G~vG~~a~qla~~~------Ga~Vi~~~~~~~-------------~~~~~~~lGa~~--vi~~~~~~~~~~ 248 (363)
T 3uog_A 190 GDRVVVQGTGGVALFGLQIAKAT------GAEVIVTSSSRE-------------KLDRAFALGADH--GINRLEEDWVER 248 (363)
T ss_dssp TCEEEEESSBHHHHHHHHHHHHT------TCEEEEEESCHH-------------HHHHHHHHTCSE--EEETTTSCHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHc------CCEEEEEecCch-------------hHHHHHHcCCCE--EEcCCcccHHHH
Confidence 45899999887666666554432 577766543322 256788889863 33322111 122
Q ss_pred HHHHHHhcCCcEEEEecCCCcC
Q 048078 128 FLSNLRALQPELCITAAYGNIL 149 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~~~~il 149 (378)
+.+.....++|+++-+.-+..+
T Consensus 249 v~~~~~g~g~D~vid~~g~~~~ 270 (363)
T 3uog_A 249 VYALTGDRGADHILEIAGGAGL 270 (363)
T ss_dssp HHHHHTTCCEEEEEEETTSSCH
T ss_pred HHHHhCCCCceEEEECCChHHH
Confidence 2233233478998876644433
No 279
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=31.25 E-value=2.7e+02 Score=25.33 Aligned_cols=92 Identities=12% Similarity=0.070 Sum_probs=53.4
Q ss_pred CCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcH
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGED 126 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~ 126 (378)
+..++|++|=|+--+.++++.|++.. +..+++.+--+..-|.|.+. ...+.+++ .
T Consensus 22 ~~~~~IgvfDSGvGGLtv~~~i~~~l----P~e~~iy~~D~a~~PYG~ks---~e~i~~~~------------------~ 76 (274)
T 3uhf_A 22 SNAMKIGVFDSGVGGLSVLKSLYEAR----LFDEIIYYGDTARVPYGVKD---KDTIIKFC------------------L 76 (274)
T ss_dssp CSCCEEEEEESSSTTHHHHHHHHHTT----CCSEEEEEECTTTCCCTTSC---HHHHHHHH------------------H
T ss_pred CCCCeEEEEECCCChHHHHHHHHHHC----CCCCEEEEecCCCCCCCCCC---HHHHHHHH------------------H
Confidence 34689999999988999999999864 24566655433333333221 11222222 1
Q ss_pred HHHHHHHhcCCcEEEEecCC-CcC-ChhhhcCCCCceEE
Q 048078 127 AFLSNLRALQPELCITAAYG-NIL-PSKFLNIPPMGTVN 163 (378)
Q Consensus 127 ~~~~~l~~~~~Dliv~~~~~-~il-p~~il~~~~~g~iN 163 (378)
+..+.|.+.++|++|++... .-. =+.+-+.+...+|+
T Consensus 77 ~~~~~L~~~g~d~IVIACNTa~~~al~~lr~~~~iPvig 115 (274)
T 3uhf_A 77 EALDFFEQFQIDMLIIACNTASAYALDALRAKAHFPVYG 115 (274)
T ss_dssp HHHHHHTTSCCSEEEECCHHHHHHSHHHHHHHCSSCEEC
T ss_pred HHHHHHHHCCCCEEEEeCCChhHHHHHHHHHhcCCCEEc
Confidence 23466778899999887753 211 12333344444554
No 280
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=31.23 E-value=1.2e+02 Score=23.75 Aligned_cols=76 Identities=13% Similarity=0.217 Sum_probs=43.6
Q ss_pred CCCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceec-CCCCCC
Q 048078 46 VSRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIF-TPERAG 124 (378)
Q Consensus 46 ~~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~-~~~~~~ 124 (378)
...++||+++-.+......|+.+++.. ++++. .+.+.. ...+...+.......+. .....+
T Consensus 11 ~~~~~~ILivdd~~~~~~~l~~~L~~~-----g~~v~-~~~~~~------------~a~~~l~~~~~dlvi~D~~l~~~~ 72 (153)
T 3hv2_A 11 VTRRPEILLVDSQEVILQRLQQLLSPL-----PYTLH-FARDAT------------QALQLLASREVDLVISAAHLPQMD 72 (153)
T ss_dssp CCSCCEEEEECSCHHHHHHHHHHHTTS-----SCEEE-EESSHH------------HHHHHHHHSCCSEEEEESCCSSSC
T ss_pred ccCCceEEEECCCHHHHHHHHHHhccc-----CcEEE-EECCHH------------HHHHHHHcCCCCEEEEeCCCCcCc
Confidence 345789999998877777777777642 46554 333221 34555666654432111 122344
Q ss_pred cHHHHHHHHhcCCcE
Q 048078 125 EDAFLSNLRALQPEL 139 (378)
Q Consensus 125 ~~~~~~~l~~~~~Dl 139 (378)
.-++++.|++..+++
T Consensus 73 g~~~~~~l~~~~~~~ 87 (153)
T 3hv2_A 73 GPTLLARIHQQYPST 87 (153)
T ss_dssp HHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHhHCCCC
Confidence 567777777765543
No 281
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=31.19 E-value=95 Score=28.77 Aligned_cols=76 Identities=12% Similarity=0.197 Sum_probs=42.2
Q ss_pred CCCceEEEEe-cCcchHHHHHHHHHccCCCCCCc-eEEEEEcCCCCCCCCCCccCChHHHHHHHHC---CCCCceecCCC
Q 048078 47 SRKKPLVFLG-SPQVSVNVLDALFNASSSPDSIF-EVAAIVTQPPSRRDRGRKVLPSPVAQYALDR---GFPADLIFTPE 121 (378)
Q Consensus 47 ~~~~rIvf~G-s~~~a~~~L~~L~~~~~~~~~~~-ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~---gIp~~~v~~~~ 121 (378)
...++|++.| ++.++..+.+.|++.. ++ +|+++.-++. ...+++++. ++. ++. .
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~~-----g~~~V~~~~r~~~------------~~~~~~~~~~~~~v~---~~~-~ 77 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDTT-----NAKKIIVYSRDEL------------KQSEMAMEFNDPRMR---FFI-G 77 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHHC-----CCSEEEEEESCHH------------HHHHHHHHHCCTTEE---EEE-C
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhhC-----CCCEEEEEECChh------------hHHHHHHHhcCCCEE---EEE-C
Confidence 3457899999 5667777888888751 34 6655432211 223333332 333 222 3
Q ss_pred CCCcHHHH-HHHHhcCCcEEEEecC
Q 048078 122 RAGEDAFL-SNLRALQPELCITAAY 145 (378)
Q Consensus 122 ~~~~~~~~-~~l~~~~~Dliv~~~~ 145 (378)
++.+.+.+ +.++ ++|++|-++-
T Consensus 78 Dl~d~~~l~~~~~--~~D~Vih~Aa 100 (344)
T 2gn4_A 78 DVRDLERLNYALE--GVDICIHAAA 100 (344)
T ss_dssp CTTCHHHHHHHTT--TCSEEEECCC
T ss_pred CCCCHHHHHHHHh--cCCEEEECCC
Confidence 44454433 4443 6899887764
No 282
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=31.18 E-value=1.4e+02 Score=26.09 Aligned_cols=35 Identities=11% Similarity=0.229 Sum_probs=20.1
Q ss_pred CceEEEEecC-cchHHHHHHHHHccCCCCCCceEEEEEc
Q 048078 49 KKPLVFLGSP-QVSVNVLDALFNASSSPDSIFEVAAIVT 86 (378)
Q Consensus 49 ~~rIvf~Gs~-~~a~~~L~~L~~~~~~~~~~~ei~~Vvt 86 (378)
.++|++.|.. .++..+.+.|++... ..++|+++.-
T Consensus 21 ~k~vlITGasggIG~~la~~L~~~G~---~~~~V~~~~r 56 (267)
T 1sny_A 21 MNSILITGCNRGLGLGLVKALLNLPQ---PPQHLFTTCR 56 (267)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSS---CCSEEEEEES
T ss_pred CCEEEEECCCCcHHHHHHHHHHhcCC---CCcEEEEEec
Confidence 4567777744 456666677776410 0167766543
No 283
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=30.85 E-value=1.6e+02 Score=28.83 Aligned_cols=108 Identities=13% Similarity=0.063 Sum_probs=66.8
Q ss_pred CCceEEEEecCcchHHHHHHHHH-ccCCCCCCceEEEEEcCCC---CCCCCCCccCChHHHHHHHHCCCCCceecCCCCC
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFN-ASSSPDSIFEVAAIVTQPP---SRRDRGRKVLPSPVAQYALDRGFPADLIFTPERA 123 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~-~~~~~~~~~ei~~Vvt~~~---~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~ 123 (378)
...||++.|.++.+....+.|.+ . +..|++|.-..- .+.| +.+..+.++.++.| ....+.....+
T Consensus 208 ~g~~vaVqG~GnVG~~~a~~L~e~~------GakvVavsD~~G~i~dp~G----ld~~~l~~~~~~~g-~l~~y~~a~~~ 276 (415)
T 2tmg_A 208 KKATVAVQGFGNVGQFAALLISQEL------GSKVVAVSDSRGGIYNPEG----FDVEELIRYKKEHG-TVVTYPKGERI 276 (415)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT------CCEEEEEECSSCEEECTTC----CCHHHHHHHHHHSS-CSTTCSSSEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHHhc------CCEEEEEEeCCCeEECCCC----CCHHHHHHHHHhhC-CcccCCCceEc
Confidence 35799999999999888888877 4 578887753210 1111 24566788888765 21101000111
Q ss_pred CcHHHHHHHHhcCCcEEEEecCCCcCChhhhcCCCCceEEEccCCCCC
Q 048078 124 GEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPL 171 (378)
Q Consensus 124 ~~~~~~~~l~~~~~Dliv~~~~~~ilp~~il~~~~~g~iNiHpSlLP~ 171 (378)
..++ +-..++|+++=++....|..+-....+.+ +-+=.+-+|-
T Consensus 277 ~~~e----il~~~~DIliP~A~~n~i~~~~a~~l~ak-~V~EgAN~p~ 319 (415)
T 2tmg_A 277 TNEE----LLELDVDILVPAALEGAIHAGNAERIKAK-AVVEGANGPT 319 (415)
T ss_dssp CHHH----HTTCSCSEEEECSSTTSBCHHHHTTCCCS-EEECCSSSCB
T ss_pred Cchh----hhcCCCcEEEecCCcCccCcccHHHcCCe-EEEeCCCccc
Confidence 2222 34679999999999988887776665443 4445555553
No 284
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=30.78 E-value=1.5e+02 Score=26.84 Aligned_cols=37 Identities=11% Similarity=0.102 Sum_probs=24.2
Q ss_pred CCCceEEEEecCcchHHHHHHHHHccCCCCCC-ceEEEEEcCCC
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNASSSPDSI-FEVAAIVTQPP 89 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~-~ei~~Vvt~~~ 89 (378)
.++|||+++|++.. ....+.|.++. + ++++++-.++.
T Consensus 2 m~~~~Ili~g~g~~-~~l~~~l~~~~-----~~~~v~~~d~~~~ 39 (331)
T 2pn1_A 2 MQKPHLLITSAGRR-AKLVEYFVKEF-----KTGRVSTADCSPL 39 (331)
T ss_dssp TTCCEEEEESCTTC-HHHHHHHHHHC-----CSSEEEEEESCTT
T ss_pred CccceEEEecCCch-HHHHHHHHHhc-----CCCEEEEEeCCCc
Confidence 45789999999864 45667776652 2 66666544443
No 285
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=30.68 E-value=79 Score=29.60 Aligned_cols=34 Identities=12% Similarity=0.020 Sum_probs=23.9
Q ss_pred CCceEEEEec-CcchHHHHHHHHHccCCCCCCceEEEEEcC
Q 048078 48 RKKPLVFLGS-PQVSVNVLDALFNASSSPDSIFEVAAIVTQ 87 (378)
Q Consensus 48 ~~~rIvf~Gs-~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~ 87 (378)
+.|+|++.|. +.++..+.+.|++. +++|+++.-.
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~------g~~V~~~~r~ 62 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHE------GHYVIASDWK 62 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESS
T ss_pred cCCeEEEECCccHHHHHHHHHHHHC------CCeEEEEECC
Confidence 3578999996 54566677888875 5788766543
No 286
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=30.38 E-value=32 Score=32.32 Aligned_cols=61 Identities=15% Similarity=0.207 Sum_probs=26.7
Q ss_pred EEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCc-HHHHHHHHhcCCcEEEEec
Q 048078 82 AAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGE-DAFLSNLRALQPELCITAA 144 (378)
Q Consensus 82 ~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~-~~~~~~l~~~~~Dliv~~~ 144 (378)
++||.+|.+..++..+. ...+.++.+++|+.+.. .......+ .++...+...++|++|++|
T Consensus 27 i~vI~NP~sg~~~~~~~-~~~i~~~L~~~g~~~~~-~~t~~~~~a~~~~~~~~~~~~d~vvv~G 88 (337)
T 2qv7_A 27 ARIIYNPTSGKEQFKRE-LPDALIKLEKAGYETSA-YATEKIGDATLEAERAMHENYDVLIAAG 88 (337)
T ss_dssp EEEEECTTSTTSCHHHH-HHHHHHHHHHTTEEEEE-EECCSTTHHHHHHHHHTTTTCSEEEEEE
T ss_pred EEEEECCCCCCCchHHH-HHHHHHHHHHcCCeEEE-EEecCcchHHHHHHHHhhcCCCEEEEEc
Confidence 45555554432222111 13455666667766442 22222111 1222223334577777776
No 287
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=30.31 E-value=92 Score=29.02 Aligned_cols=77 Identities=10% Similarity=0.089 Sum_probs=44.6
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCc-eEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIF-EVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~-ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
.-+|++.|.+..+...++.+... +. +|+++...+. -.++|+++|... ++.....++++
T Consensus 172 g~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi~~~~~~~-------------~~~~a~~lGa~~--vi~~~~~~~~~ 230 (356)
T 1pl8_A 172 GHKVLVCGAGPIGMVTLLVAKAM------GAAQVVVTDLSAT-------------RLSKAKEIGADL--VLQISKESPQE 230 (356)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT------TCSEEEEEESCHH-------------HHHHHHHTTCSE--EEECSSCCHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHc------CCCEEEEECCCHH-------------HHHHHHHhCCCE--EEcCcccccch
Confidence 35899999876666555544332 45 5655543322 257888999873 33322111244
Q ss_pred HHHHHHh---cCCcEEEEecCC
Q 048078 128 FLSNLRA---LQPELCITAAYG 146 (378)
Q Consensus 128 ~~~~l~~---~~~Dliv~~~~~ 146 (378)
+.+.+.+ ..+|+++-+.-.
T Consensus 231 ~~~~i~~~~~~g~D~vid~~g~ 252 (356)
T 1pl8_A 231 IARKVEGQLGCKPEVTIECTGA 252 (356)
T ss_dssp HHHHHHHHHTSCCSEEEECSCC
T ss_pred HHHHHHHHhCCCCCEEEECCCC
Confidence 5554443 469999877643
No 288
>3rof_A Low molecular weight protein-tyrosine-phosphatase; phosphatase, hydrolase; 1.03A {Staphylococcus aureus}
Probab=30.15 E-value=2.4e+02 Score=23.43 Aligned_cols=84 Identities=8% Similarity=0.018 Sum_probs=44.0
Q ss_pred CCceEEEEecCcchHH-----HHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCC
Q 048078 48 RKKPLVFLGSPQVSVN-----VLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPER 122 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~-----~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~ 122 (378)
.++||+|+-+++..-+ .|+.+++.... ..++|..-=|.+.. . |. .......+.++++||+... ..+..
T Consensus 5 ~m~~vLFVC~gN~cRSpmAE~i~~~~~~~~gl--~~~~v~SAGt~~~~-~--G~-~~~~~a~~~l~~~Gid~~~-~~ar~ 77 (158)
T 3rof_A 5 GMVDVAFVCLGNICRSPMAEAIMRQRLKDRNI--HDIKVHSRGTGSWN-L--GE-PPHEGTQKILNKHNIPFDG-MISEL 77 (158)
T ss_dssp SCEEEEEEESSSSSHHHHHHHHHHHHHHHTTC--CSEEEEEEETTCCS-T--TC-CCCHHHHHHHHHTTCCCTT-CCCCB
T ss_pred CCCEEEEEeCCchhHHHHHHHHHHHHHHHcCC--CCeEEEecccCCcc-c--CC-CCCHHHHHHHHHcCCCcCC-CcceE
Confidence 3679999988875433 34444332110 12444433333210 0 11 1234567788899999321 22333
Q ss_pred CCcHHHHHHHHhcCCcEEEEecCC
Q 048078 123 AGEDAFLSNLRALQPELCITAAYG 146 (378)
Q Consensus 123 ~~~~~~~~~l~~~~~Dliv~~~~~ 146 (378)
+..+ . .+|+||++.-.
T Consensus 78 l~~~-------~-~~DlIi~Md~~ 93 (158)
T 3rof_A 78 FEAT-------D-DFDYIVAMDQS 93 (158)
T ss_dssp CCTT-------C-CCSEEEESSHH
T ss_pred CChh-------h-cCCEEEEcCHH
Confidence 4322 1 79999998753
No 289
>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*
Probab=30.10 E-value=1.6e+02 Score=26.25 Aligned_cols=69 Identities=14% Similarity=0.085 Sum_probs=39.7
Q ss_pred eEEEEe-cCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCc-HHH
Q 048078 51 PLVFLG-SPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGE-DAF 128 (378)
Q Consensus 51 rIvf~G-s~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~-~~~ 128 (378)
||++.| ++.++..+.+.|++.. .+++|+++.-.++.. . ++. +... ++.+ +.+
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~----~g~~V~~~~r~~~~~----------~--------~~~---~~~~-D~~d~~~~ 54 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKY----GKKNVIASDIVQRDT----------G--------GIK---FITL-DVSNRDEI 54 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHH----CGGGEEEEESSCCCC----------T--------TCC---EEEC-CTTCHHHH
T ss_pred CEEEEcCCcHHHHHHHHHHHHhc----CCCEEEEecCCCccc----------c--------Cce---EEEe-cCCCHHHH
Confidence 588898 5666677778888741 136776654332211 0 344 3322 3334 445
Q ss_pred HHHHHhcCCcEEEEecC
Q 048078 129 LSNLRALQPELCITAAY 145 (378)
Q Consensus 129 ~~~l~~~~~Dliv~~~~ 145 (378)
.+.+++.++|++|-.+.
T Consensus 55 ~~~~~~~~~d~vih~a~ 71 (317)
T 3ajr_A 55 DRAVEKYSIDAIFHLAG 71 (317)
T ss_dssp HHHHHHTTCCEEEECCC
T ss_pred HHHHhhcCCcEEEECCc
Confidence 55666668999987764
No 290
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=30.03 E-value=48 Score=32.63 Aligned_cols=23 Identities=35% Similarity=0.485 Sum_probs=19.0
Q ss_pred CceEEEEecCcchHHHHHHHHHc
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNA 71 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~ 71 (378)
.++|+++|++..+..+.+.|.+.
T Consensus 3 ~k~VlViGaG~iG~~ia~~L~~~ 25 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTDS 25 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC
Confidence 46899999998888888888763
No 291
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=29.95 E-value=32 Score=32.40 Aligned_cols=34 Identities=18% Similarity=0.005 Sum_probs=25.1
Q ss_pred CCCCCCc-eEEEEecCcchHHHHHHHHHccCCCCCCceEEE
Q 048078 44 FSVSRKK-PLVFLGSPQVSVNVLDALFNASSSPDSIFEVAA 83 (378)
Q Consensus 44 ~~~~~~~-rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~ 83 (378)
++...+| ||+|+|.+.++......|.++ +++|.+
T Consensus 9 ~~~~m~M~kI~iIG~G~mG~~la~~L~~~------G~~V~~ 43 (366)
T 1evy_A 9 KDELLYLNKAVVFGSGAFGTALAMVLSKK------CREVCV 43 (366)
T ss_dssp CCCCCCEEEEEEECCSHHHHHHHHHHTTT------EEEEEE
T ss_pred hhHhhccCeEEEECCCHHHHHHHHHHHhC------CCEEEE
Confidence 3445556 999999999988888888654 466543
No 292
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=29.93 E-value=1.2e+02 Score=27.54 Aligned_cols=18 Identities=11% Similarity=0.239 Sum_probs=14.0
Q ss_pred HHHHHHhcCCcEEEEecC
Q 048078 128 FLSNLRALQPELCITAAY 145 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~~ 145 (378)
+.+.+++.+||++++.+.
T Consensus 88 l~~~l~~~~pDvv~~~~~ 105 (364)
T 1f0k_A 88 ARAIMKAYKPDVVLGMGG 105 (364)
T ss_dssp HHHHHHHHCCSEEEECSS
T ss_pred HHHHHHhcCCCEEEEeCC
Confidence 446677889999998764
No 293
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=29.92 E-value=46 Score=33.03 Aligned_cols=27 Identities=19% Similarity=0.155 Sum_probs=22.2
Q ss_pred ceEEEEecCcchHHHHHHHHHccCCCCCCceEE
Q 048078 50 KPLVFLGSPQVSVNVLDALFNASSSPDSIFEVA 82 (378)
Q Consensus 50 ~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~ 82 (378)
|||+|+|.+.++......|.++ +++|.
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~------G~~V~ 28 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEK------GFKVA 28 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT------TCCEE
T ss_pred CEEEEEChHHHHHHHHHHHHHC------CCEEE
Confidence 7999999999988888888775 56653
No 294
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=29.76 E-value=1.7e+02 Score=27.31 Aligned_cols=154 Identities=14% Similarity=0.089 Sum_probs=83.7
Q ss_pred CCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcH
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGED 126 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~ 126 (378)
-..++|+++|.|.++..+.+.|... +++|.+ .++... .+.+.+.|+. .. +-+
T Consensus 144 l~g~~vgIIG~G~iG~~vA~~l~~~------G~~V~~--~d~~~~------------~~~~~~~g~~---~~-----~l~ 195 (333)
T 2d0i_A 144 LYGKKVGILGMGAIGKAIARRLIPF------GVKLYY--WSRHRK------------VNVEKELKAR---YM-----DID 195 (333)
T ss_dssp STTCEEEEECCSHHHHHHHHHHGGG------TCEEEE--ECSSCC------------HHHHHHHTEE---EC-----CHH
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHC------CCEEEE--ECCCcc------------hhhhhhcCce---ec-----CHH
Confidence 3457899999999998888877654 566643 333221 1345555654 21 112
Q ss_pred HHHHHHHhcCCcEEEEecCC-----CcCChhhhcCCCCceEEEccCCCCCCCCc----hHHHHHHHcCCcEEEEEEEEec
Q 048078 127 AFLSNLRALQPELCITAAYG-----NILPSKFLNIPPMGTVNIHPSLLPLYRGA----APVQRALQGGAKETGVSLAFTV 197 (378)
Q Consensus 127 ~~~~~l~~~~~Dliv~~~~~-----~ilp~~il~~~~~g~iNiHpSlLP~yRG~----~pi~wai~~g~~~tGvTih~~~ 197 (378)
+.++ ++|+++++--. +++.+++++..+.+ +=+.-| ||. ..+..++.+| ...|+-++...
T Consensus 196 ---e~l~--~aDiVil~vp~~~~t~~~i~~~~~~~mk~g-ilin~s-----rg~~vd~~aL~~aL~~~-~i~gaglDv~~ 263 (333)
T 2d0i_A 196 ---ELLE--KSDIVILALPLTRDTYHIINEERVKKLEGK-YLVNIG-----RGALVDEKAVTEAIKQG-KLKGYATDVFE 263 (333)
T ss_dssp ---HHHH--HCSEEEECCCCCTTTTTSBCHHHHHHTBTC-EEEECS-----CGGGBCHHHHHHHHHTT-CBCEEEESCCS
T ss_pred ---HHHh--hCCEEEEcCCCChHHHHHhCHHHHhhCCCC-EEEECC-----CCcccCHHHHHHHHHcC-CceEEEecCCC
Confidence 2332 58998887543 46776666665555 555555 664 2356677766 35556666554
Q ss_pred CCC-CCCCeeEEE-EEEeCCC---CCHHHHHHHHHHHHHHHHHHHHHHhHcCC
Q 048078 198 RAL-DAGPVIARE-KMEVDDQ---IKAPELLVLLFSEGSELLIRELPSILDGS 245 (378)
Q Consensus 198 ~~~-D~G~Ii~Q~-~~~I~~~---dt~~~L~~kl~~~~~~ll~~~l~~l~~g~ 245 (378)
.+. ..-+++.-. .+-+.|. .|.+ -..++ .+++.+.+..+.+|.
T Consensus 264 ~EP~~~~~L~~~~~nviltPh~~~~t~~-~~~~~----~~~~~~n~~~~~~g~ 311 (333)
T 2d0i_A 264 KEPVREHELFKYEWETVLTPHYAGLALE-AQEDV----GFRAVENLLKVLRGE 311 (333)
T ss_dssp SSSCSCCGGGGCTTTEEECCSCTTCCHH-HHHHH----HHHHHHHHHHHHTTC
T ss_pred CCCCCCchHHcCCCCEEEcCccCCCcHH-HHHHH----HHHHHHHHHHHHcCC
Confidence 332 112233222 2434433 2332 23333 444555566666665
No 295
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=29.74 E-value=91 Score=27.96 Aligned_cols=73 Identities=15% Similarity=0.279 Sum_probs=39.2
Q ss_pred ceEEEEec-CcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcH-H
Q 048078 50 KPLVFLGS-PQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGED-A 127 (378)
Q Consensus 50 ~rIvf~Gs-~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~-~ 127 (378)
|||++.|. +-++..+.+.|++. +++|+++.-..... . ..+ ..++. +.. -++.+. .
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~------G~~V~~~~r~~~~~---~--------~~~--~~~~~---~~~-~Dl~~~~~ 57 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLAR------GLEVAVLDNLATGK---R--------ENV--PKGVP---FFR-VDLRDKEG 57 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT------TCEEEEECCCSSCC---G--------GGS--CTTCC---EEC-CCTTCHHH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHC------CCEEEEEECCCcCc---h--------hhc--ccCeE---EEE-CCCCCHHH
Confidence 68999986 44555666777764 57776542211110 0 000 02444 333 234444 4
Q ss_pred HHHHHHhcCCcEEEEecC
Q 048078 128 FLSNLRALQPELCITAAY 145 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~~ 145 (378)
+.+.+++.++|.++-.+.
T Consensus 58 ~~~~~~~~~~d~vi~~a~ 75 (311)
T 2p5y_A 58 VERAFREFRPTHVSHQAA 75 (311)
T ss_dssp HHHHHHHHCCSEEEECCS
T ss_pred HHHHHHhcCCCEEEECcc
Confidence 445666668998887654
No 296
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=29.73 E-value=29 Score=31.26 Aligned_cols=31 Identities=13% Similarity=0.110 Sum_probs=25.4
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEE
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAI 84 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~V 84 (378)
.+|||+|+|.+.++...-..|.++ +++|.++
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~------G~~V~~~ 35 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSV------GHYVTVL 35 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHT------TCEEEEC
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHC------CCEEEEe
Confidence 468999999999999988888875 5776644
No 297
>2l17_A Synarsc, arsenate reductase; alpha/beta sandwich, oxidoreductase; NMR {Synechocystis} PDB: 2l18_A 2l19_A
Probab=29.70 E-value=54 Score=26.49 Aligned_cols=81 Identities=10% Similarity=0.087 Sum_probs=44.4
Q ss_pred CceEEEEecCcchHHHH-HHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 49 KKPLVFLGSPQVSVNVL-DALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L-~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
.+||+|+=+++..-+-+ ++|++.... ..+++..-=|. |. .......+.++++||+... ..+..+.+..
T Consensus 4 m~~VLFVC~gN~cRSpmAEa~~~~~~~--~~~~v~SAGt~-------g~-~~~~~a~~~l~e~Gid~s~-~~sr~l~~~~ 72 (134)
T 2l17_A 4 MKKVMFVCKRNSCRSQMAEGFAKTLGA--GKIAVTSCGLE-------SS-RVHPTAIAMMEEVGIDISG-QTSDPIENFN 72 (134)
T ss_dssp CEEEEEECCSSTHHHHHHHHHHHHHSB--TTEEEEEECCT-------TS-SCCHHHHHHHHTTTCCCSS-CCCCCGGGCC
T ss_pred CCEEEEEeCCchHHHHHHHHHHHHHcC--CCEEEEcccCC-------CC-CCCHHHHHHHHHcCCCccc-CccccCChHH
Confidence 35899998888655533 556654321 13443322222 11 1234567888899999321 2334443221
Q ss_pred HHHHHHhcCCcEEEEe-cCC
Q 048078 128 FLSNLRALQPELCITA-AYG 146 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~-~~~ 146 (378)
-..+|+||++ ...
T Consensus 73 ------~~~~DlIi~md~~~ 86 (134)
T 2l17_A 73 ------ADDYDVVISLCGCG 86 (134)
T ss_dssp ------GGGCSEEEECSCSC
T ss_pred ------hccCCEEEEeCchh
Confidence 1369999999 544
No 298
>1q0q_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase; HET: DXP NDP; 1.90A {Escherichia coli} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1q0l_A* 1q0h_A* 3r0i_A* 1k5h_A 1onn_A 1ono_A 1onp_A* 1jvs_A* 1t1r_A* 1t1s_A* 2egh_A* 3anm_A* 3anl_A* 3ann_A* 3iie_A
Probab=29.63 E-value=1.5e+02 Score=29.01 Aligned_cols=135 Identities=15% Similarity=0.197 Sum_probs=73.0
Q ss_pred CCCCceEEEEec-CcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCC
Q 048078 46 VSRKKPLVFLGS-PQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAG 124 (378)
Q Consensus 46 ~~~~~rIvf~Gs-~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~ 124 (378)
+++..||+++|| |+++..+|+-+.+.. ..++|+++.....- .-+.+.|++++-.+.++.. ...
T Consensus 6 ~~~~k~i~ILGSTGSIGtqtLdVi~~~p----d~f~V~aL~ag~nv----------~~L~~q~~~f~p~~v~v~d--~~~ 69 (406)
T 1q0q_A 6 HSGMKQLTILGSTGSIGCSTLDVVRHNP----EHFRVVALVAGKNV----------TRMVEQCLEFSPRYAVMDD--EAS 69 (406)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHHCT----TTEEEEEEEESSCH----------HHHHHHHHHHCCSEEEESS--HHH
T ss_pred cCCceeEEEEccCcHHHHHHHHHHHhCC----CccEEEEEEcCCCH----------HHHHHHHHHhCCCEEEEcC--HHH
Confidence 345779999995 557778888776642 35999999875432 3577888888877543321 000
Q ss_pred cHHHHHHHHhcCCcEEEEecCCCcCChhhhcCCCC-ceEEEccCCCCCCCCchHHHHHHHcCCcEEEEEEEEecCC--CC
Q 048078 125 EDAFLSNLRALQPELCITAAYGNILPSKFLNIPPM-GTVNIHPSLLPLYRGAAPVQRALQGGAKETGVSLAFTVRA--LD 201 (378)
Q Consensus 125 ~~~~~~~l~~~~~Dliv~~~~~~ilp~~il~~~~~-g~iNiHpSlLP~yRG~~pi~wai~~g~~~tGvTih~~~~~--~D 201 (378)
-+++.+.|...+.+.-|..|-.-++ ++...+.. -++| -.-.+.|..|...||..|. ++-.-+++ +=
T Consensus 70 ~~~L~~~l~~~~~~~~v~~G~~~l~--~~a~~~~~D~Vv~----AIvG~aGL~PTlaAi~aGK-----~iaLANKEsLV~ 138 (406)
T 1q0q_A 70 AKLLKTMLQQQGSRTEVLSGQQAAC--DMAALEDVDQVMA----AIVGAAGLLPTLAAIRAGK-----TILLANKESLVT 138 (406)
T ss_dssp HHHHHHHHHHTTCCCEEEESHHHHH--HHHTCTTCCEEEE----CCSSGGGHHHHHHHHHTTC-----EEEECCHHHHHH
T ss_pred HHHHHHHhhcCCCCcEEEeCHHHHH--HHhcCCCCCEEEE----ccccHhHHHHHHHHHHCCC-----eEEEechHHHHh
Confidence 1122223311122333333422211 11111111 1222 3456778999999999996 44455443 45
Q ss_pred CCCeeE
Q 048078 202 AGPVIA 207 (378)
Q Consensus 202 ~G~Ii~ 207 (378)
+|+++.
T Consensus 139 aG~lv~ 144 (406)
T 1q0q_A 139 CGRLFM 144 (406)
T ss_dssp HTHHHH
T ss_pred chHHHH
Confidence 566654
No 299
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=29.60 E-value=1.6e+02 Score=25.24 Aligned_cols=35 Identities=26% Similarity=0.196 Sum_probs=27.6
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCC
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQP 88 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~ 88 (378)
.+.|++++|.+.++..+++.|.+. ++++++.+-+.
T Consensus 11 ~~k~v~IiGAGg~g~~v~~~l~~~------~~~~vgfiDd~ 45 (220)
T 4ea9_A 11 AIGGVVIIGGGGHAKVVIESLRAC------GETVAAIVDAD 45 (220)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHT------TCCEEEEECSC
T ss_pred CCCCEEEEcCCHHHHHHHHHHHhC------CCEEEEEEeCC
Confidence 355899999999988888887652 58899888543
No 300
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=29.55 E-value=64 Score=31.92 Aligned_cols=40 Identities=15% Similarity=0.137 Sum_probs=27.9
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCC----CCCCceEEEEEcC
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSS----PDSIFEVAAIVTQ 87 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~----~~~~~ei~~Vvt~ 87 (378)
+++||+++|.+.++...++.|.+.... ...+++|++|+..
T Consensus 9 k~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~ 52 (444)
T 3mtj_A 9 KPIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVR 52 (444)
T ss_dssp SCEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECS
T ss_pred CcccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEEC
Confidence 478999999999888888777642100 0136888888754
No 301
>1d1q_A Tyrosine phosphatase (E.C.3.1.3.48); beta-alpha-beta, hydrolase; HET: 4NP; 1.70A {Saccharomyces cerevisiae} SCOP: c.44.1.1 PDB: 1d2a_A* 1d1p_A*
Probab=29.53 E-value=2.4e+02 Score=23.26 Aligned_cols=87 Identities=8% Similarity=0.081 Sum_probs=46.6
Q ss_pred CCCceEEEEecCcchHH-----HHHHHHHccCCCCCC-ceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCC
Q 048078 47 SRKKPLVFLGSPQVSVN-----VLDALFNASSSPDSI-FEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTP 120 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~-----~L~~L~~~~~~~~~~-~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~ 120 (378)
..++||+|+=+++..-+ .|+.++..... ... ++|..-=|.+.. . |.. ......+.++++||+.. ..+
T Consensus 5 ~~~~~VLFVCtgN~cRSpmAEal~~~~~~~~gl-~~~~~~v~SAGt~~~~-~--g~~-~~p~a~~~l~~~Gid~s--~~a 77 (161)
T 1d1q_A 5 KPKISVAFIALGNFCRSPMAEAIFKHEVEKANL-ENRFNKIDSFGTSNYH-V--GES-PDHRTVSICKQHGVKIN--HKG 77 (161)
T ss_dssp SCCEEEEEEESSSSSHHHHHHHHHHHHHHHTTC-GGGEEEEEEEESSCTT-B--TCC-CCHHHHHHHHHTTCCCC--CCB
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHHHHHHcCC-CCCeEEEEeccccCCc-C--CCC-CCHHHHHHHHHcCcCCC--ceE
Confidence 35689999988884443 44444432100 001 444333232210 0 111 23456788889999953 445
Q ss_pred CCCCcHHHHHHHHhcCCcEEEEecCC
Q 048078 121 ERAGEDAFLSNLRALQPELCITAAYG 146 (378)
Q Consensus 121 ~~~~~~~~~~~l~~~~~Dliv~~~~~ 146 (378)
..+.+..+ ..+|+||++.-.
T Consensus 78 r~l~~~~~------~~~DlIl~M~~~ 97 (161)
T 1d1q_A 78 KQIKTKHF------DEYDYIIGMDES 97 (161)
T ss_dssp CBCCGGGG------GTCSEEEESSHH
T ss_pred eECCHHHH------hhCCEEEEeCHH
Confidence 55554321 369999998653
No 302
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=29.49 E-value=1.1e+02 Score=27.17 Aligned_cols=76 Identities=11% Similarity=0.079 Sum_probs=41.5
Q ss_pred CceEEEEecCc-chHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 49 KKPLVFLGSPQ-VSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 49 ~~rIvf~Gs~~-~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
..++++.|... ++..+.+.|.+. +++|+.+-. +. ..+.+.+++.+-... ++. -++.+++
T Consensus 27 gk~vlVTGas~gIG~aia~~la~~------G~~V~~~~r--~~----------~~~~~~~~~~~~~~~-~~~-~Dv~d~~ 86 (266)
T 3grp_A 27 GRKALVTGATGGIGEAIARCFHAQ------GAIVGLHGT--RE----------DKLKEIAADLGKDVF-VFS-ANLSDRK 86 (266)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHT------TCEEEEEES--CH----------HHHHHHHHHHCSSEE-EEE-CCTTSHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC------CCEEEEEeC--CH----------HHHHHHHHHhCCceE-EEE-eecCCHH
Confidence 45677777543 666677788775 566654422 11 245666667665533 222 2344433
Q ss_pred -HHHHHHh-----cCCcEEEEec
Q 048078 128 -FLSNLRA-----LQPELCITAA 144 (378)
Q Consensus 128 -~~~~l~~-----~~~Dliv~~~ 144 (378)
+.+.+++ -.+|++|..+
T Consensus 87 ~v~~~~~~~~~~~g~iD~lvnnA 109 (266)
T 3grp_A 87 SIKQLAEVAEREMEGIDILVNNA 109 (266)
T ss_dssp HHHHHHHHHHHHHTSCCEEEECC
T ss_pred HHHHHHHHHHHHcCCCCEEEECC
Confidence 3333322 2789988765
No 303
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=29.43 E-value=1e+02 Score=28.16 Aligned_cols=84 Identities=6% Similarity=-0.006 Sum_probs=44.8
Q ss_pred CCceEEEEecCc---chH--HHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCC
Q 048078 48 RKKPLVFLGSPQ---VSV--NVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPER 122 (378)
Q Consensus 48 ~~~rIvf~Gs~~---~a~--~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~ 122 (378)
++|||+|+...- .++ ..+..|.+.. .+++|..+...... .....+....++++..+.....
T Consensus 3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L----~g~~v~v~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~ 68 (394)
T 3okp_A 3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ----DPESIVVFASTQNA----------EEAHAYDKTLDYEVIRWPRSVM 68 (394)
T ss_dssp -CCCEEEEESCCTTSCSHHHHHHHHHHTTS----CGGGEEEEEECSSH----------HHHHHHHTTCSSEEEEESSSSC
T ss_pred CCceEEEEeCccCCccchHHHHHHHHHHHh----cCCeEEEEECCCCc----------cchhhhccccceEEEEcccccc
Confidence 478999998621 122 3445555543 26787655544321 1123444566666322211111
Q ss_pred CC----cHHHHHHHHhcCCcEEEEecC
Q 048078 123 AG----EDAFLSNLRALQPELCITAAY 145 (378)
Q Consensus 123 ~~----~~~~~~~l~~~~~Dliv~~~~ 145 (378)
.. -..+.+.+++.++|++++...
T Consensus 69 ~~~~~~~~~l~~~~~~~~~Dvv~~~~~ 95 (394)
T 3okp_A 69 LPTPTTAHAMAEIIREREIDNVWFGAA 95 (394)
T ss_dssp CSCHHHHHHHHHHHHHTTCSEEEESSC
T ss_pred ccchhhHHHHHHHHHhcCCCEEEECCc
Confidence 11 234567788899999987554
No 304
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=29.35 E-value=1.8e+02 Score=27.36 Aligned_cols=37 Identities=11% Similarity=0.219 Sum_probs=28.3
Q ss_pred cCCcEEEEecC----------------CCcCChhhhcCCCCceEEEccCCCCCCCC
Q 048078 135 LQPELCITAAY----------------GNILPSKFLNIPPMGTVNIHPSLLPLYRG 174 (378)
Q Consensus 135 ~~~Dliv~~~~----------------~~ilp~~il~~~~~g~iNiHpSlLP~yRG 174 (378)
.++|++.+-.| .+.|.+++++..+ .++-+|| ||.+||
T Consensus 228 ~~aDvvy~~~w~s~g~~~~~~~~~r~~~y~vt~e~l~~a~-~ai~MHc--LP~~Rg 280 (324)
T 1js1_X 228 EGADFIYAKNWAAYTGDNYGQILSTDRNWTVGDRQMAVTN-NAYFMHC--LPVRRN 280 (324)
T ss_dssp TTCSEEEECCCCCCSTTCTTCCCCCCTTSSBCHHHHTTSS-SCEEECC--SCCCBT
T ss_pred CCCCEEEecCcccCCCccccchHHHhcCcccCHHHHHhcC-CcEEECC--CCCCCC
Confidence 36788887555 3567788888888 8999995 688876
No 305
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=29.26 E-value=56 Score=30.05 Aligned_cols=77 Identities=10% Similarity=0.119 Sum_probs=39.5
Q ss_pred ceEEEEec-CcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcH-H
Q 048078 50 KPLVFLGS-PQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGED-A 127 (378)
Q Consensus 50 ~rIvf~Gs-~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~-~ 127 (378)
|||++.|. +.++..+++.|++... ....++|.++.-.++... ....++. +.. .++.+. +
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~-~~~~~~V~~~~r~~~~~~--------------~~~~~~~---~~~-~Dl~d~~~ 62 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADT-PGGPWKVYGVARRTRPAW--------------HEDNPIN---YVQ-CDISDPDD 62 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTC-TTCSEEEEEEESSCCCSC--------------CCSSCCE---EEE-CCTTSHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCC-CCCceEEEEEeCCCCccc--------------cccCceE---EEE-eecCCHHH
Confidence 68999995 4455556666765310 000177776654333210 0112343 332 233343 4
Q ss_pred HHHHHHhcC-CcEEEEecC
Q 048078 128 FLSNLRALQ-PELCITAAY 145 (378)
Q Consensus 128 ~~~~l~~~~-~Dliv~~~~ 145 (378)
+.+.++... +|++|-++.
T Consensus 63 ~~~~~~~~~~~d~vih~a~ 81 (364)
T 2v6g_A 63 SQAKLSPLTDVTHVFYVTW 81 (364)
T ss_dssp HHHHHTTCTTCCEEEECCC
T ss_pred HHHHHhcCCCCCEEEECCC
Confidence 445565555 898887664
No 306
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=29.23 E-value=1.6e+02 Score=26.81 Aligned_cols=92 Identities=14% Similarity=0.164 Sum_probs=55.6
Q ss_pred CCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcH
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGED 126 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~ 126 (378)
-...+|+++|.+..+..+.+.|... +.+|.. + ++.. ... +.+.+.|+. +... .
T Consensus 155 l~g~~v~IiG~G~iG~~~a~~l~~~------G~~V~~-~-d~~~----------~~~-~~~~~~g~~---~~~~-----~ 207 (300)
T 2rir_A 155 IHGSQVAVLGLGRTGMTIARTFAAL------GANVKV-G-ARSS----------AHL-ARITEMGLV---PFHT-----D 207 (300)
T ss_dssp STTSEEEEECCSHHHHHHHHHHHHT------TCEEEE-E-ESSH----------HHH-HHHHHTTCE---EEEG-----G
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHC------CCEEEE-E-ECCH----------HHH-HHHHHCCCe---EEch-----h
Confidence 3467999999999988888888764 565543 2 2221 112 233456654 2211 1
Q ss_pred HHHHHHHhcCCcEEEEecCCCcCChhhhcCCCCceEEEccC
Q 048078 127 AFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPS 167 (378)
Q Consensus 127 ~~~~~l~~~~~Dliv~~~~~~ilp~~il~~~~~g~iNiHpS 167 (378)
++.+.+ .++|++++..-..++.++.++..+.+.+=+--+
T Consensus 208 ~l~~~l--~~aDvVi~~~p~~~i~~~~~~~mk~g~~lin~a 246 (300)
T 2rir_A 208 ELKEHV--KDIDICINTIPSMILNQTVLSSMTPKTLILDLA 246 (300)
T ss_dssp GHHHHS--TTCSEEEECCSSCCBCHHHHTTSCTTCEEEECS
T ss_pred hHHHHh--hCCCEEEECCChhhhCHHHHHhCCCCCEEEEEe
Confidence 222333 369999998777888888888766554333333
No 307
>2k6g_A Replication factor C subunit 1; protein, BRCT, DNA binding, activator, alternative splicing, ATP-binding, DNA replication, DNA- binding; NMR {Homo sapiens} PDB: 2k7f_A
Probab=29.17 E-value=75 Score=24.94 Aligned_cols=92 Identities=16% Similarity=0.190 Sum_probs=50.3
Q ss_pred eeEeeecCCCCCCCCCCCCC---CCCCceEEEEecCc-chHHHHHHHHHccCCC---CCCceEEEEEcCCCCCCCCCCcc
Q 048078 26 RRFFCFKGPATSSTTPSAFS---VSRKKPLVFLGSPQ-VSVNVLDALFNASSSP---DSIFEVAAIVTQPPSRRDRGRKV 98 (378)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~---~~~~~rIvf~Gs~~-~a~~~L~~L~~~~~~~---~~~~ei~~Vvt~~~~~~grg~~~ 98 (378)
|+|+...+|....+-+-+.. .-.-++|+|-|+-. ++-.-++.+++...-. .-.-....||+..+. |
T Consensus 9 ~~~~~~~~p~~~g~~~~p~~~~~~l~G~~~v~TG~l~~~~R~e~~~~i~~~Gg~v~~sVSkkTd~LV~G~~~--g----- 81 (109)
T 2k6g_A 9 RSYLNREGPKALGSKEIPKGAENCLEGLIFVITGVLESIERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDS--G----- 81 (109)
T ss_dssp HHHHTCCCCSSTTTSCCCCCCTTTTTTCEEEEESBCSSCCHHHHHHHHHHTTCEEESSCCTTCCEEEECBCC--C-----
T ss_pred HHhhcccCCCCCCcccCCCCCCCCCCCCEEEEeeeCCCCCHHHHHHHHHHcCCEeeCcccCCceEEEECCCC--C-----
Confidence 44555555555554322221 23467999999873 5778888888753210 001122334443321 1
Q ss_pred CChHHHHHHHHCCCCCceecCCCCCCcHHHHHHHHh
Q 048078 99 LPSPVAQYALDRGFPADLIFTPERAGEDAFLSNLRA 134 (378)
Q Consensus 99 ~~~~v~~~A~~~gIp~~~v~~~~~~~~~~~~~~l~~ 134 (378)
+.=.+-|+++||| |+ ++++|++.|..
T Consensus 82 --~sK~~kA~~lgI~---Ii-----~E~~f~~ll~~ 107 (109)
T 2k6g_A 82 --QSKSDKAAALGTK---II-----DEDGLLNLIRN 107 (109)
T ss_dssp --HHHHHHHHHHTCE---EE-----CHHHHHHHHHH
T ss_pred --hHHHHHHHHcCCe---EE-----eHHHHHHHHHh
Confidence 1224668899999 64 46778777754
No 308
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=29.06 E-value=60 Score=29.24 Aligned_cols=34 Identities=9% Similarity=0.200 Sum_probs=27.1
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCC
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQP 88 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~ 88 (378)
+|||+++|.+..+..+.+.+.+. .. ++++++...
T Consensus 3 MmkI~ViGaGrMG~~i~~~l~~~-----~~-eLva~~d~~ 36 (243)
T 3qy9_A 3 SMKILLIGYGAMNQRVARLAEEK-----GH-EIVGVIENT 36 (243)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-----TC-EEEEEECSS
T ss_pred ceEEEEECcCHHHHHHHHHHHhC-----CC-EEEEEEecC
Confidence 58999999999888888887764 24 898888644
No 309
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=28.97 E-value=42 Score=30.31 Aligned_cols=31 Identities=13% Similarity=0.085 Sum_probs=23.4
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEE
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAI 84 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~V 84 (378)
++|||+|+|.+.++......|.+. +++|.++
T Consensus 2 ~~m~i~iiG~G~~G~~~a~~l~~~------g~~V~~~ 32 (316)
T 2ew2_A 2 NAMKIAIAGAGAMGSRLGIMLHQG------GNDVTLI 32 (316)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHT------TCEEEEE
T ss_pred CCCeEEEECcCHHHHHHHHHHHhC------CCcEEEE
Confidence 358999999999988888888775 5676543
No 310
>2q7x_A UPF0052 protein SP_1565; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; HET: MLY MSE; 2.00A {Streptococcus pneumoniae}
Probab=28.87 E-value=70 Score=30.32 Aligned_cols=38 Identities=29% Similarity=0.314 Sum_probs=29.8
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCC
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSR 91 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~ 91 (378)
+++||++||.+.-....|+.|.+. ..++.+|||-.|.-
T Consensus 3 ~~~~IV~igGGtGl~~ll~gLk~~------~~~iTaIVtvaDDG 40 (326)
T 2q7x_A 3 RXPXITVIGGGTGSPVILXSLREX------DVEIAAIVTVADDG 40 (326)
T ss_dssp CCCEEEEECCCTTHHHHHHHHHHS------SCEEEEEECCBSCG
T ss_pred CCCeEEEEcCcccHHHHHHHhccC------CCCeEEEEECccCC
Confidence 468999999987666677888664 57899999877653
No 311
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=28.86 E-value=1.6e+02 Score=22.26 Aligned_cols=71 Identities=4% Similarity=0.020 Sum_probs=39.5
Q ss_pred CCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecC--CCCCC
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFT--PERAG 124 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~--~~~~~ 124 (378)
..++||+++..+......|+.+++.. .+++++..+.+.. ...+.+++...... +.. ....+
T Consensus 6 ~~~~~iLivdd~~~~~~~l~~~L~~~----~~~~~v~~~~~~~------------~a~~~l~~~~~dli-i~d~~l~~~~ 68 (143)
T 3cnb_A 6 KNDFSILIIEDDKEFADMLTQFLENL----FPYAKIKIAYNPF------------DAGDLLHTVKPDVV-MLDLMMVGMD 68 (143)
T ss_dssp ---CEEEEECSCHHHHHHHHHHHHHH----CTTCEEEEECSHH------------HHHHHHHHTCCSEE-EEETTCTTSC
T ss_pred cCCceEEEEECCHHHHHHHHHHHHhc----cCccEEEEECCHH------------HHHHHHHhcCCCEE-EEecccCCCc
Confidence 34789999998877777787777641 1566544544332 24455555554422 222 12334
Q ss_pred cHHHHHHHHh
Q 048078 125 EDAFLSNLRA 134 (378)
Q Consensus 125 ~~~~~~~l~~ 134 (378)
..++++.+++
T Consensus 69 g~~~~~~l~~ 78 (143)
T 3cnb_A 69 GFSICHRIKS 78 (143)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 5567777776
No 312
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=28.80 E-value=1.8e+02 Score=27.32 Aligned_cols=31 Identities=10% Similarity=-0.031 Sum_probs=18.4
Q ss_pred ceEEEEecCcch-----HHHHHHHHHccCCCCCCceEEEEEc
Q 048078 50 KPLVFLGSPQVS-----VNVLDALFNASSSPDSIFEVAAIVT 86 (378)
Q Consensus 50 ~rIvf~Gs~~~a-----~~~L~~L~~~~~~~~~~~ei~~Vvt 86 (378)
|||+|++.+..+ ....++|.+. +|+|..+.+
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~------Gh~V~~~~~ 36 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKAL------GVQTRMCAP 36 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHT------TCEEEEEEC
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHC------CCeEEEEeC
Confidence 688888766422 2234455543 688876544
No 313
>1s8n_A Putative antiterminator; RV1626, structural genomics, transcriptional antiterminator, component system, PSI; 1.48A {Mycobacterium tuberculosis} SCOP: c.23.1.1 PDB: 1sd5_A
Probab=28.67 E-value=1.4e+02 Score=24.71 Aligned_cols=81 Identities=9% Similarity=0.042 Sum_probs=46.7
Q ss_pred CCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecC--CCCCC
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFT--PERAG 124 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~--~~~~~ 124 (378)
..++||+++..+......|+.+++. .++++++.+++.. ...+.+.+...... +.. ....+
T Consensus 11 ~m~~~iLivdd~~~~~~~l~~~L~~-----~g~~v~~~~~~~~------------~al~~~~~~~~dlv-i~D~~~p~~~ 72 (205)
T 1s8n_A 11 AVPRRVLIAEDEALIRMDLAEMLRE-----EGYEIVGEAGDGQ------------EAVELAELHKPDLV-IMDVKMPRRD 72 (205)
T ss_dssp CCCCEEEEECSSHHHHHHHHHHHHH-----TTCEEEEEESSHH------------HHHHHHHHHCCSEE-EEESSCSSSC
T ss_pred CCCccEEEEECCHHHHHHHHHHHHH-----CCCEEEEEeCCHH------------HHHHHHhhcCCCEE-EEeCCCCCCC
Confidence 3457999999887777778877764 2677765655432 23455555544422 221 22344
Q ss_pred cHHHHHHHHhcCC-cEEEEecC
Q 048078 125 EDAFLSNLRALQP-ELCITAAY 145 (378)
Q Consensus 125 ~~~~~~~l~~~~~-Dliv~~~~ 145 (378)
.-++++.+++..+ -++++.++
T Consensus 73 g~~~~~~l~~~~~~pii~lt~~ 94 (205)
T 1s8n_A 73 GIDAASEIASKRIAPIVVLTAF 94 (205)
T ss_dssp HHHHHHHHHHTTCSCEEEEEEG
T ss_pred hHHHHHHHHhcCCCCEEEEecC
Confidence 5567777766443 34555444
No 314
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=28.63 E-value=66 Score=24.56 Aligned_cols=81 Identities=7% Similarity=0.018 Sum_probs=46.3
Q ss_pred CCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecC--CC-CC
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFT--PE-RA 123 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~--~~-~~ 123 (378)
..++||+++..+......|+.+++.. +++++.++++.. ...+.+.+...... +.. .. ..
T Consensus 7 ~~~~~iLivdd~~~~~~~l~~~L~~~-----g~~v~~~~~~~~------------~a~~~~~~~~~dli-i~d~~~~~~~ 68 (140)
T 3cg0_A 7 DDLPGVLIVEDGRLAAATLRIQLESL-----GYDVLGVFDNGE------------EAVRCAPDLRPDIA-LVDIMLCGAL 68 (140)
T ss_dssp -CCCEEEEECCBHHHHHHHHHHHHHH-----TCEEEEEESSHH------------HHHHHHHHHCCSEE-EEESSCCSSS
T ss_pred CCCceEEEEECCHHHHHHHHHHHHHC-----CCeeEEEECCHH------------HHHHHHHhCCCCEE-EEecCCCCCC
Confidence 34789999998877777888877752 577665554332 23455555544422 222 11 34
Q ss_pred CcHHHHHHHHhc-CCcEEEEecC
Q 048078 124 GEDAFLSNLRAL-QPELCITAAY 145 (378)
Q Consensus 124 ~~~~~~~~l~~~-~~Dliv~~~~ 145 (378)
+..++++.+++. ..-++++.+.
T Consensus 69 ~g~~~~~~l~~~~~~~ii~ls~~ 91 (140)
T 3cg0_A 69 DGVETAARLAAGCNLPIIFITSS 91 (140)
T ss_dssp CHHHHHHHHHHHSCCCEEEEECC
T ss_pred CHHHHHHHHHhCCCCCEEEEecC
Confidence 455667777664 3345555554
No 315
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=28.50 E-value=2.2e+02 Score=27.50 Aligned_cols=104 Identities=13% Similarity=0.116 Sum_probs=61.8
Q ss_pred CCCceEEEEecCcchHHHHHHHHHccCCCCCCc-eEEEEEcCCCC--CCCCCCc-cCChHHHHHHHHCCCCCceecCCCC
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNASSSPDSIF-EVAAIVTQPPS--RRDRGRK-VLPSPVAQYALDRGFPADLIFTPER 122 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~-ei~~Vvt~~~~--~~grg~~-~~~~~v~~~A~~~gIp~~~v~~~~~ 122 (378)
-...||+|+|.+..+..+.+.|+.. +. +|. ++++.. ..+|... + ..--..+|++.+.- .
T Consensus 190 l~~~kVVv~GAGaAG~~iAkll~~~------G~~~I~--v~Dr~Gli~~~R~~~~L-~~~k~~~A~~~~~~----~---- 252 (388)
T 1vl6_A 190 IEEVKVVVNGIGAAGYNIVKFLLDL------GVKNVV--AVDRKGILNENDPETCL-NEYHLEIARITNPE----R---- 252 (388)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHH------TCCEEE--EEETTEECCTTSGGGCS-SHHHHHHHHTSCTT----C----
T ss_pred CCCcEEEEECCCHHHHHHHHHHHhC------CCCeEE--EEECCCcccCCCccccc-CHHHHHHHHhhhcc----C----
Confidence 4578999999999888888888875 23 332 233320 0122100 1 11235667665421 1
Q ss_pred CCcHHHHHHHHhcCCcEEEEecCCCcCChhhhcCCCCceEEEccCCCCC
Q 048078 123 AGEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPL 171 (378)
Q Consensus 123 ~~~~~~~~~l~~~~~Dliv~~~~~~ilp~~il~~~~~g~iNiHpSlLP~ 171 (378)
+..++.+.++. +|++|.++-..++.+++++..+.+-|=+=-|- |.
T Consensus 253 -~~~~L~eav~~--ADVlIG~Sap~l~t~emVk~Ma~~pIIfalSN-Pt 297 (388)
T 1vl6_A 253 -LSGDLETALEG--ADFFIGVSRGNILKPEWIKKMSRKPVIFALAN-PV 297 (388)
T ss_dssp -CCSCHHHHHTT--CSEEEECSCSSCSCHHHHTTSCSSCEEEECCS-SS
T ss_pred -chhhHHHHHcc--CCEEEEeCCCCccCHHHHHhcCCCCEEEEcCC-CC
Confidence 12235566644 79999999889999999987654444444443 44
No 316
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=28.50 E-value=49 Score=26.84 Aligned_cols=43 Identities=5% Similarity=-0.014 Sum_probs=28.5
Q ss_pred HHHHHHHCCCCCcee--cCCCCCCcHHHHHHHHhcCCcEEEEecCC
Q 048078 103 VAQYALDRGFPADLI--FTPERAGEDAFLSNLRALQPELCITAAYG 146 (378)
Q Consensus 103 v~~~A~~~gIp~~~v--~~~~~~~~~~~~~~l~~~~~Dliv~~~~~ 146 (378)
+.+.+++.|+++... ....+ -.+++++..++.++|++|+...+
T Consensus 83 ~~~~~~~~g~~~~~~~~v~~G~-~~~~I~~~a~~~~~DLIV~G~~g 127 (155)
T 3dlo_A 83 AVSIIRKEGAEGEEHLLVRGKE-PPDDIVDFADEVDAIAIVIGIRK 127 (155)
T ss_dssp HHHHHHHTTCCEEEEEEESSSC-HHHHHHHHHHHTTCSEEEEECCE
T ss_pred HHHHHHhcCCCceEEEEecCCC-HHHHHHHHHHHcCCCEEEECCCC
Confidence 455667789885421 11122 24677888889999999987654
No 317
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=28.14 E-value=47 Score=31.38 Aligned_cols=37 Identities=14% Similarity=0.229 Sum_probs=27.6
Q ss_pred CCceEEEEe-cCcchHHHHHHHHHccCCCCCCceEEEEEcC
Q 048078 48 RKKPLVFLG-SPQVSVNVLDALFNASSSPDSIFEVAAIVTQ 87 (378)
Q Consensus 48 ~~~rIvf~G-s~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~ 87 (378)
+++||+++| ++..+...++.|.+.. ...++++++.+.
T Consensus 2 ~~~kV~I~GAtG~iG~~llr~L~~~~---~p~~elv~i~s~ 39 (336)
T 2r00_A 2 QQFNVAIFGATGAVGETMLEVLQERE---FPVDELFLLASE 39 (336)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTT---CCEEEEEEEECT
T ss_pred CccEEEEECCCCHHHHHHHHHHhcCC---CCCEEEEEEECC
Confidence 368999999 9988888888887641 025788887653
No 318
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=28.07 E-value=1.3e+02 Score=23.44 Aligned_cols=81 Identities=7% Similarity=0.033 Sum_probs=46.4
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecC--CCCCCc
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFT--PERAGE 125 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~--~~~~~~ 125 (378)
.++||+++..+......|+.+++.. .+++++..+++.. .+.+.+.+...... +.. ....+.
T Consensus 4 ~~~~ILivdd~~~~~~~l~~~L~~~----~~~~v~~~~~~~~------------~a~~~l~~~~~dli-i~D~~l~~~~g 66 (153)
T 3cz5_A 4 STARIMLVDDHPIVREGYRRLIERR----PGYAVVAEAADAG------------EAYRLYRETTPDIV-VMDLTLPGPGG 66 (153)
T ss_dssp CCEEEEEECSCHHHHHHHHHHHTTS----TTEEEEEEESSHH------------HHHHHHHTTCCSEE-EECSCCSSSCH
T ss_pred cccEEEEECCcHHHHHHHHHHHhhC----CCcEEEEEeCCHH------------HHHHHHhcCCCCEE-EEecCCCCCCH
Confidence 4689999998877777777777641 2566655554332 24455555554322 222 123345
Q ss_pred HHHHHHHHhcCCc--EEEEecC
Q 048078 126 DAFLSNLRALQPE--LCITAAY 145 (378)
Q Consensus 126 ~~~~~~l~~~~~D--liv~~~~ 145 (378)
.++++.+++..++ ++++.+.
T Consensus 67 ~~~~~~l~~~~~~~~ii~ls~~ 88 (153)
T 3cz5_A 67 IEATRHIRQWDGAARILIFTMH 88 (153)
T ss_dssp HHHHHHHHHHCTTCCEEEEESC
T ss_pred HHHHHHHHHhCCCCeEEEEECC
Confidence 5677777776443 4554444
No 319
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=28.06 E-value=1.3e+02 Score=26.68 Aligned_cols=23 Identities=13% Similarity=0.170 Sum_probs=20.8
Q ss_pred CceEEEEecCcchHHHHHHHHHc
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNA 71 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~ 71 (378)
..||+++|.+.++..+++.|...
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~ 53 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASA 53 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHH
T ss_pred CCeEEEEeeCHHHHHHHHHHHHc
Confidence 46899999999999999999886
No 320
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=28.04 E-value=1.4e+02 Score=26.68 Aligned_cols=89 Identities=15% Similarity=0.197 Sum_probs=47.2
Q ss_pred CceEEEEecCc-----chHHHHHHHHHccCCCCCCceEEEE-EcCCCCCCCCCC-ccCChHHHHHHHHCCCCCceec-CC
Q 048078 49 KKPLVFLGSPQ-----VSVNVLDALFNASSSPDSIFEVAAI-VTQPPSRRDRGR-KVLPSPVAQYALDRGFPADLIF-TP 120 (378)
Q Consensus 49 ~~rIvf~Gs~~-----~a~~~L~~L~~~~~~~~~~~ei~~V-vt~~~~~~grg~-~~~~~~v~~~A~~~gIp~~~v~-~~ 120 (378)
++||++++-.. +.+.+|..+.+. +.+|..| +|..+. ...+. ........+.|+..|++....+ .+
T Consensus 3 ~~~vL~v~aHPDDe~l~~Ggtia~~~~~------G~~V~vv~lT~G~~-g~~~~~~~R~~E~~~A~~~LGv~~~~~L~~~ 75 (242)
T 2ixd_A 3 GLHILAFGAHADDVEIGMAGTIAKYTKQ------GYEVGICDLTEADL-SSNGTIELRKEEAKVAARIMGVKTRLNLAMP 75 (242)
T ss_dssp CCSEEEEESSTTHHHHHHHHHHHHHHHT------TCCEEEEEEECCTT-CSSSCHHHHHHHHHHHHHHHTCCEEEEEEEC
T ss_pred CccEEEEEeCCChHHHhHHHHHHHHHHC------CCeEEEEEEcCCCC-CCCCCHHHHHHHHHHHHHHcCCCeEEECCCC
Confidence 56888888432 234566666654 5666544 354322 11110 1122345566778899832222 22
Q ss_pred CC--CCc----HHHHHHHHhcCCcEEEEec
Q 048078 121 ER--AGE----DAFLSNLRALQPELCITAA 144 (378)
Q Consensus 121 ~~--~~~----~~~~~~l~~~~~Dliv~~~ 144 (378)
+. ... ..+.+.|++.+||++++..
T Consensus 76 D~~~~~~~~~~~~l~~~ir~~~PdvV~t~~ 105 (242)
T 2ixd_A 76 DRGLYMKEEYIREIVKVIRTYKPKLVFAPY 105 (242)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHCCSEEEEEC
T ss_pred CCCCCChHHHHHHHHHHHHHcCCCEEEECC
Confidence 22 112 2445678899999998743
No 321
>4bas_A ADP-ribosylation factor, putative (small GTPase, putative); hydrolase; HET: GNP; 2.00A {Trypanosoma brucei TREU927}
Probab=27.98 E-value=25 Score=29.23 Aligned_cols=33 Identities=9% Similarity=0.014 Sum_probs=16.9
Q ss_pred CCCCCCCCCCCCCCCceEEEEecCcchHHHHHH
Q 048078 35 ATSSTTPSAFSVSRKKPLVFLGSPQVSVNVLDA 67 (378)
Q Consensus 35 ~~~~~~~~~~~~~~~~rIvf~Gs~~~a~~~L~~ 67 (378)
.++.+++.+.+....+||+++|....+-++|-.
T Consensus 3 ~~~~~~~~~~~~~~~~ki~v~G~~~~GKSsl~~ 35 (199)
T 4bas_A 3 SSHHHHHHMGQSKTKLQVVMCGLDNSGKTTIIN 35 (199)
T ss_dssp -------------CEEEEEEECCTTSCHHHHHH
T ss_pred ccccccccccCCCCCcEEEEECCCCCCHHHHHH
Confidence 355555666777889999999999888887643
No 322
>3jvi_A Protein tyrosine phosphatase; niaid, ssgcid, seattle structural genomics center for infect disease, parasitic protozoan, dysentery; 1.80A {Entamoeba histolytica} PDB: 3js5_A* 3ily_A 3ido_A*
Probab=27.95 E-value=2.5e+02 Score=23.23 Aligned_cols=86 Identities=12% Similarity=0.147 Sum_probs=44.6
Q ss_pred CCceEEEEecCcchHH-----HHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCC
Q 048078 48 RKKPLVFLGSPQVSVN-----VLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPER 122 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~-----~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~ 122 (378)
+++||+|+-+++..-+ .|+.+++.... ...++|..-=|.+.. . |.. ......+.++++||+.. ..+..
T Consensus 3 ~m~~vLFVC~gN~cRSpmAE~~~~~~~~~~gl-~~~~~v~SAGt~~~~-~--G~~-~~~~a~~~l~~~Gid~~--~~ar~ 75 (161)
T 3jvi_A 3 GSMKLLFVCLGNICRSPAAEAVMKKVIQNHHL-TEKYICDSAGTCSYH-E--GQQ-ADSRMRKVGKSRGYQVD--SISRP 75 (161)
T ss_dssp -CEEEEEEESSSSSHHHHHHHHHHHHHHHTTC-GGGEEEEEEESCCTT-T--TCB-CCHHHHHHHHHTTCCCC--CBCCB
T ss_pred CCcEEEEECCCchhHHHHHHHHHHHHHHHcCC-CCcEEEEeeecCCcc-c--CCC-CCHHHHHHHHHcCcCCC--CeeeE
Confidence 4679999988875433 34444432100 012444433333210 0 111 23456778889999941 23444
Q ss_pred CCcHHHHHHHHhcCCcEEEEecCC
Q 048078 123 AGEDAFLSNLRALQPELCITAAYG 146 (378)
Q Consensus 123 ~~~~~~~~~l~~~~~Dliv~~~~~ 146 (378)
+..+.+ ..+|+||++.-.
T Consensus 76 l~~~~~------~~~DlIl~Md~~ 93 (161)
T 3jvi_A 76 VVSSDF------KNFDYIFAMDND 93 (161)
T ss_dssp CCHHHH------HHCSEEEESSHH
T ss_pred CCHHHh------cCCCEEEEeChH
Confidence 443322 258999998753
No 323
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=27.87 E-value=39 Score=33.47 Aligned_cols=107 Identities=16% Similarity=0.114 Sum_probs=63.5
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHHH
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAF 128 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~~ 128 (378)
..|++++|.+.......+.|.+ .+++++.+++...... ..+ .+ .. . +.. + +-.++
T Consensus 313 Gkrv~i~~~~~~~~~l~~~L~e------lGm~vv~~~~~~~~~~-~~~----~~---------~~-~-v~~-~--D~~~l 367 (458)
T 3pdi_B 313 SARTAIAADPDLLLGFDALLRS------MGAHTVAAVVPARAAA-LVD----SP---------LP-S-VRV-G--DLEDL 367 (458)
T ss_dssp TCEEEEECCHHHHHHHHHHHHT------TTCEEEEEEESSCCSC-CTT----TT---------SS-C-EEE-S--HHHHH
T ss_pred CCEEEEECCcHHHHHHHHHHHH------CCCEEEEEEECCCChh-hhh----Cc---------cC-c-EEe-C--CHHHH
Confidence 4699999988777777777754 4899999987543211 000 00 11 1 221 1 22356
Q ss_pred HHHHHhcCCcEEEEecCCCcCChhhhcCCCCceEE----------EccCCCCCCCCchHHHHHHHc
Q 048078 129 LSNLRALQPELCITAAYGNILPSKFLNIPPMGTVN----------IHPSLLPLYRGAAPVQRALQG 184 (378)
Q Consensus 129 ~~~l~~~~~Dliv~~~~~~ilp~~il~~~~~g~iN----------iHpSlLP~yRG~~pi~wai~~ 184 (378)
.+.+++.+||+++.-++.+.+-+++ ...++. .|....=-|+|+.-+...|.|
T Consensus 368 e~~i~~~~pDllig~~~~~~~a~k~----gip~~~~gfPi~dr~~~~~~p~~Gy~Ga~~l~~~i~n 429 (458)
T 3pdi_B 368 EHAARAGQAQLVIGNSHALASARRL----GVPLLRAGFPQYDLLGGFQRCWSGYRGSSQVLFDLAN 429 (458)
T ss_dssp HHHHHHHTCSEEEECTTHHHHHHHT----TCCEEECSSCCTTCTTGGGCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCEEEEChhHHHHHHHc----CCCEEEecCCcceecCccCCCeeeHhhHHHHHHHHHH
Confidence 6778899999999988876654432 122332 234455568887666554444
No 324
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=27.86 E-value=69 Score=29.63 Aligned_cols=32 Identities=9% Similarity=0.032 Sum_probs=23.2
Q ss_pred CceEEEEec-CcchHHHHHHHHHccCCCCCCceEEEEEc
Q 048078 49 KKPLVFLGS-PQVSVNVLDALFNASSSPDSIFEVAAIVT 86 (378)
Q Consensus 49 ~~rIvf~Gs-~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt 86 (378)
+.||++.|- +..+...++.|++. ++++++-|.
T Consensus 13 ~~~v~V~Gasg~~G~~~~~~l~~~------g~~~V~~Vn 45 (294)
T 2yv1_A 13 NTKAIVQGITGRQGSFHTKKMLEC------GTKIVGGVT 45 (294)
T ss_dssp TCCEEEETTTSHHHHHHHHHHHHT------TCCEEEEEC
T ss_pred CCEEEEECCCCCHHHHHHHHHHhC------CCeEEEEeC
Confidence 678999995 66667788888774 466665555
No 325
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=27.79 E-value=38 Score=31.35 Aligned_cols=61 Identities=7% Similarity=0.102 Sum_probs=28.5
Q ss_pred EEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCc-HHHHHHHHhcCCcEEEEecC
Q 048078 82 AAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGE-DAFLSNLRALQPELCITAAY 145 (378)
Q Consensus 82 ~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~-~~~~~~l~~~~~Dliv~~~~ 145 (378)
+.||.+|.+-.|++.+. ...+.++.++.|+.++. +..+...+ .++.+.+.+ ++|.+|++|=
T Consensus 11 ~~vi~Np~sG~~~~~~~-~~~i~~~l~~~~~~~~~-~~t~~~~~a~~~~~~~~~-~~d~vv~~GG 72 (304)
T 3s40_A 11 VLLIVNPKAGQGDLHTN-LTKIVPPLAAAFPDLHI-LHTKEQGDATKYCQEFAS-KVDLIIVFGG 72 (304)
T ss_dssp EEEEECTTCSSSCHHHH-HHHHHHHHHHHCSEEEE-EECCSTTHHHHHHHHHTT-TCSEEEEEEC
T ss_pred EEEEECcccCCCchHHH-HHHHHHHHHHcCCeEEE-EEccCcchHHHHHHHhhc-CCCEEEEEcc
Confidence 45555665433332222 13456666667776542 22222222 223333322 6777777763
No 326
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=27.78 E-value=40 Score=32.00 Aligned_cols=33 Identities=18% Similarity=0.298 Sum_probs=26.2
Q ss_pred CCceEEEEe-cCcchHHHHHHHHHccCCCCCCceEEEEE
Q 048078 48 RKKPLVFLG-SPQVSVNVLDALFNASSSPDSIFEVAAIV 85 (378)
Q Consensus 48 ~~~rIvf~G-s~~~a~~~L~~L~~~~~~~~~~~ei~~Vv 85 (378)
+++||+++| ++..+...++.|.+. ..+++++|.
T Consensus 3 ~~~kV~IiGAtG~iG~~llr~L~~~-----p~~elvai~ 36 (350)
T 2ep5_A 3 DKIKVSLLGSTGMVGQKMVKMLAKH-----PYLELVKVS 36 (350)
T ss_dssp CCEEEEEESCSSHHHHHHHHHHTTC-----SSEEEEEEE
T ss_pred CCcEEEEECcCCHHHHHHHHHHHhC-----CCcEEEEEe
Confidence 368999999 898888888877653 368888887
No 327
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=27.63 E-value=1.2e+02 Score=26.15 Aligned_cols=80 Identities=8% Similarity=-0.030 Sum_probs=44.1
Q ss_pred CCCCCceEEEEecCc-chHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCC
Q 048078 45 SVSRKKPLVFLGSPQ-VSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERA 123 (378)
Q Consensus 45 ~~~~~~rIvf~Gs~~-~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~ 123 (378)
......+|++.|... ++..+.+.|++. +++|+.+.-+. ..+.+.+++.+-.+. +.. -++
T Consensus 10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~------G~~V~~~~r~~------------~~~~~~~~~~~~~~~-~~~-~D~ 69 (249)
T 3f9i_A 10 IDLTGKTSLITGASSGIGSAIARLLHKL------GSKVIISGSNE------------EKLKSLGNALKDNYT-IEV-CNL 69 (249)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHT------TCEEEEEESCH------------HHHHHHHHHHCSSEE-EEE-CCT
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHC------CCEEEEEcCCH------------HHHHHHHHHhccCcc-EEE-cCC
Confidence 445567888888554 566666777775 57765543221 234555555432322 222 233
Q ss_pred Cc-HHHHHHHHhc-CCcEEEEec
Q 048078 124 GE-DAFLSNLRAL-QPELCITAA 144 (378)
Q Consensus 124 ~~-~~~~~~l~~~-~~Dliv~~~ 144 (378)
.+ +++.+.+++. ++|++|..+
T Consensus 70 ~~~~~~~~~~~~~~~id~li~~A 92 (249)
T 3f9i_A 70 ANKEECSNLISKTSNLDILVCNA 92 (249)
T ss_dssp TSHHHHHHHHHTCSCCSEEEECC
T ss_pred CCHHHHHHHHHhcCCCCEEEECC
Confidence 33 4444555554 689888765
No 328
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=27.59 E-value=2.9e+02 Score=26.20 Aligned_cols=109 Identities=11% Similarity=0.071 Sum_probs=52.4
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCC-CceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCC--CCCC-
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDS-IFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTP--ERAG- 124 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~-~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~--~~~~- 124 (378)
+|||+++.......-.+..|+++.... . ++++..|+|.... .-..+..+..||...+-+.. ...+
T Consensus 27 ~~kI~~v~Gtr~~~~~~a~li~~l~~~-~~~~~~~~~~tG~h~----------~m~~~~~~~~~i~~~~~l~v~~~~~~~ 95 (403)
T 3ot5_A 27 KIKVMSIFGTRPEAIKMAPLVLALEKE-PETFESTVVITAQHR----------EMLDQVLEIFDIKPDIDLDIMKKGQTL 95 (403)
T ss_dssp CEEEEEEECSHHHHHHHHHHHHHHHTC-TTTEEEEEEECC---------------CHHHHHHTTCCCSEECCCCC-CCCH
T ss_pred cceEEEEEecChhHHHHHHHHHHHHhC-CCCCcEEEEEecCcH----------HHHHHHHHhcCCCCCcccccCCCCCCH
Confidence 467876543321222223333332111 2 5787778875421 01245557888842211111 1111
Q ss_pred -c------HHHHHHHHhcCCcEEEEecCC-CcCChhhh-cCCCCceEEEccCC
Q 048078 125 -E------DAFLSNLRALQPELCITAAYG-NILPSKFL-NIPPMGTVNIHPSL 168 (378)
Q Consensus 125 -~------~~~~~~l~~~~~Dliv~~~~~-~ilp~~il-~~~~~g~iNiHpSl 168 (378)
. ..+.+.+++.+||++++.+.. ..++..+. ...+..++.+|.++
T Consensus 96 ~~~~~~~~~~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~agl 148 (403)
T 3ot5_A 96 AEITSRVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEAGL 148 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCCC
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCc
Confidence 1 134467788999999998752 23332221 12334577888776
No 329
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=27.56 E-value=1.2e+02 Score=27.10 Aligned_cols=79 Identities=10% Similarity=0.016 Sum_probs=42.9
Q ss_pred CCCCceEEEEecCc-chHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCC
Q 048078 46 VSRKKPLVFLGSPQ-VSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAG 124 (378)
Q Consensus 46 ~~~~~rIvf~Gs~~-~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~ 124 (378)
.-...+|++.|... ++..+.+.|++. +++|+++.-++ ....+.+++.+-.++ ++. -++.
T Consensus 13 ~l~gk~vlVTGas~gIG~~~a~~L~~~------G~~V~~~~r~~------------~~~~~~~~~~~~~~~-~~~-~Dl~ 72 (291)
T 3rd5_A 13 SFAQRTVVITGANSGLGAVTARELARR------GATVIMAVRDT------------RKGEAAARTMAGQVE-VRE-LDLQ 72 (291)
T ss_dssp CCTTCEEEEECCSSHHHHHHHHHHHHT------TCEEEEEESCH------------HHHHHHHTTSSSEEE-EEE-CCTT
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHC------CCEEEEEECCH------------HHHHHHHHHhcCCee-EEE-cCCC
Confidence 34456788888544 667777888775 57765543221 124455544443322 222 2344
Q ss_pred c-HHHHHHHHhc-CCcEEEEec
Q 048078 125 E-DAFLSNLRAL-QPELCITAA 144 (378)
Q Consensus 125 ~-~~~~~~l~~~-~~Dliv~~~ 144 (378)
+ +++.+.+++. .+|++|..+
T Consensus 73 d~~~v~~~~~~~~~iD~lv~nA 94 (291)
T 3rd5_A 73 DLSSVRRFADGVSGADVLINNA 94 (291)
T ss_dssp CHHHHHHHHHTCCCEEEEEECC
T ss_pred CHHHHHHHHHhcCCCCEEEECC
Confidence 4 4444555554 678887655
No 330
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=27.45 E-value=91 Score=29.05 Aligned_cols=100 Identities=8% Similarity=-0.006 Sum_probs=56.8
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCC---CCCceecCCCCCC
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRG---FPADLIFTPERAG 124 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~g---Ip~~~v~~~~~~~ 124 (378)
...+|+++|++..+...+++|.+.. +++.+.|+. ++. ....+++++.+ ++ +. .++
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~-----~~~~V~v~~-r~~----------~~a~~la~~~~~~~~~---~~-~~~-- 181 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVF-----DIGEVKAYD-VRE----------KAAKKFVSYCEDRGIS---AS-VQP-- 181 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHS-----CCCEEEEEC-SSH----------HHHHHHHHHHHHTTCC---EE-ECC--
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhC-----CccEEEEEC-CCH----------HHHHHHHHHHHhcCce---EE-ECC--
Confidence 4579999999998888999988742 355566654 321 23456665543 55 32 221
Q ss_pred cHHHHHHHHhcCCcEEEEecCC--CcCChhhhcCCCCceEEEccCCCCCCCCchH
Q 048078 125 EDAFLSNLRALQPELCITAAYG--NILPSKFLNIPPMGTVNIHPSLLPLYRGAAP 177 (378)
Q Consensus 125 ~~~~~~~l~~~~~Dliv~~~~~--~ilp~~il~~~~~g~iNiHpSlLP~yRG~~p 177 (378)
..+.+ ++|+++++.-. .+++.+.+. +...++.-.+.-|.-|=..+
T Consensus 182 ---~~e~v---~aDvVi~aTp~~~pv~~~~~l~--~G~~V~~ig~~~p~~~el~~ 228 (322)
T 1omo_A 182 ---AEEAS---RCDVLVTTTPSRKPVVKAEWVE--EGTHINAIGADGPGKQELDV 228 (322)
T ss_dssp ---HHHHT---SSSEEEECCCCSSCCBCGGGCC--TTCEEEECSCCSTTCCCBCH
T ss_pred ---HHHHh---CCCEEEEeeCCCCceecHHHcC--CCeEEEECCCCCCCccccCH
Confidence 22333 68999887643 223222222 23355555566666555443
No 331
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=27.44 E-value=83 Score=27.34 Aligned_cols=96 Identities=16% Similarity=0.059 Sum_probs=54.7
Q ss_pred CCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecC--CCCCC
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFT--PERAG 124 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~--~~~~~ 124 (378)
..++||+++-.+......|+.+++. .++++. .+++.. ...+.+.+...... +.. ....+
T Consensus 21 ~~~~~ILivdd~~~~~~~l~~~L~~-----~g~~v~-~~~~~~------------~al~~~~~~~~dlv-llD~~lp~~~ 81 (250)
T 3r0j_A 21 TPEARVLVVDDEANIVELLSVSLKF-----QGFEVY-TATNGA------------QALDRARETRPDAV-ILDVXMPGMD 81 (250)
T ss_dssp CSSCEEEEECSCHHHHHHHHHHHHH-----TTCEEE-EESSHH------------HHHHHHHHHCCSEE-EEESCCSSSC
T ss_pred CCCceEEEEECCHHHHHHHHHHHHH-----CCCEEE-EECCHH------------HHHHHHHhCCCCEE-EEeCCCCCCC
Confidence 4578999999887777788887775 257764 333221 34555555554432 222 22345
Q ss_pred cHHHHHHHHhcCCc--EEEEecCCCcCChhhhcCCCCceEE
Q 048078 125 EDAFLSNLRALQPE--LCITAAYGNILPSKFLNIPPMGTVN 163 (378)
Q Consensus 125 ~~~~~~~l~~~~~D--liv~~~~~~ilp~~il~~~~~g~iN 163 (378)
.-++++.|++..++ ++++.++. -+.........|+..
T Consensus 82 g~~~~~~lr~~~~~~~ii~lt~~~--~~~~~~~~~~~Ga~~ 120 (250)
T 3r0j_A 82 GFGVLRRLRADGIDAPALFLTARD--SLQDKIAGLTLGGDD 120 (250)
T ss_dssp HHHHHHHHHHTTCCCCEEEEECST--THHHHHHHHTSTTCE
T ss_pred HHHHHHHHHhcCCCCCEEEEECCC--CHHHHHHHHHcCCcE
Confidence 56788888876554 55555543 233344444555443
No 332
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=27.37 E-value=1.8e+02 Score=24.78 Aligned_cols=75 Identities=17% Similarity=0.170 Sum_probs=41.4
Q ss_pred CceEEEEecCc-chHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHC-CCCCceecCCCCCCcH
Q 048078 49 KKPLVFLGSPQ-VSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDR-GFPADLIFTPERAGED 126 (378)
Q Consensus 49 ~~rIvf~Gs~~-~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~-gIp~~~v~~~~~~~~~ 126 (378)
.++|++.|... ++..+.+.|++. +++|+++.-++ ..+.+.+++. ++. +.. -++.+.
T Consensus 7 ~~~vlVTGasggiG~~~a~~l~~~------G~~V~~~~r~~------------~~~~~~~~~~~~~~---~~~-~D~~~~ 64 (244)
T 1cyd_A 7 GLRALVTGAGKGIGRDTVKALHAS------GAKVVAVTRTN------------SDLVSLAKECPGIE---PVC-VDLGDW 64 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHT------TCEEEEEESCH------------HHHHHHHHHSTTCE---EEE-CCTTCH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC------CCEEEEEeCCH------------HHHHHHHHhccCCC---cEE-ecCCCH
Confidence 46888998644 566666778774 57765543221 1234444443 444 332 344444
Q ss_pred -HHHHHHHhc-CCcEEEEecC
Q 048078 127 -AFLSNLRAL-QPELCITAAY 145 (378)
Q Consensus 127 -~~~~~l~~~-~~Dliv~~~~ 145 (378)
++.+.++.+ .+|++|..+-
T Consensus 65 ~~~~~~~~~~~~id~vi~~Ag 85 (244)
T 1cyd_A 65 DATEKALGGIGPVDLLVNNAA 85 (244)
T ss_dssp HHHHHHHTTCCCCSEEEECCC
T ss_pred HHHHHHHHHcCCCCEEEECCc
Confidence 444455444 4798887653
No 333
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=27.31 E-value=1.7e+02 Score=25.14 Aligned_cols=32 Identities=16% Similarity=0.088 Sum_probs=20.9
Q ss_pred CceEEEEec-CcchHHHHHHHHHccCCCCCCceEEEEEc
Q 048078 49 KKPLVFLGS-PQVSVNVLDALFNASSSPDSIFEVAAIVT 86 (378)
Q Consensus 49 ~~rIvf~Gs-~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt 86 (378)
.++|++.|. +.++..+.+.|++. +++|+++.-
T Consensus 7 ~k~vlVTGasggiG~~~a~~l~~~------G~~V~~~~r 39 (258)
T 3afn_B 7 GKRVLITGSSQGIGLATARLFARA------GAKVGLHGR 39 (258)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHT------TCEEEEEES
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC------CCEEEEECC
Confidence 356777774 44666777888775 577765543
No 334
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=27.13 E-value=1.5e+02 Score=25.25 Aligned_cols=75 Identities=12% Similarity=0.149 Sum_probs=39.4
Q ss_pred CceEEEEecC-cchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcH-
Q 048078 49 KKPLVFLGSP-QVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGED- 126 (378)
Q Consensus 49 ~~rIvf~Gs~-~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~- 126 (378)
..+|++.|.. .++..+.+.|++. +++|+++.-++ ..+.+.+.+.+ ..+ ++.. ++.+.
T Consensus 5 ~k~vlVtGasggiG~~~a~~l~~~------G~~V~~~~r~~------------~~~~~~~~~~~-~~~-~~~~-D~~~~~ 63 (234)
T 2ehd_A 5 KGAVLITGASRGIGEATARLLHAK------GYRVGLMARDE------------KRLQALAAELE-GAL-PLPG-DVREEG 63 (234)
T ss_dssp CCEEEESSTTSHHHHHHHHHHHHT------TCEEEEEESCH------------HHHHHHHHHST-TCE-EEEC-CTTCHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC------CCEEEEEECCH------------HHHHHHHHHhh-hce-EEEe-cCCCHH
Confidence 3468888754 4666677778774 57766553221 13445555543 221 2222 33333
Q ss_pred HHHHHHHhc-----CCcEEEEec
Q 048078 127 AFLSNLRAL-----QPELCITAA 144 (378)
Q Consensus 127 ~~~~~l~~~-----~~Dliv~~~ 144 (378)
++.+.++.. ++|++|...
T Consensus 64 ~~~~~~~~~~~~~~~id~li~~A 86 (234)
T 2ehd_A 64 DWARAVAAMEEAFGELSALVNNA 86 (234)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHHHcCCCCEEEECC
Confidence 333333322 789888765
No 335
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=27.07 E-value=30 Score=33.72 Aligned_cols=35 Identities=14% Similarity=0.158 Sum_probs=18.3
Q ss_pred CCCCCCCCCCCCCceEEEEecCcchHHHHHHHHHc
Q 048078 37 SSTTPSAFSVSRKKPLVFLGSPQVSVNVLDALFNA 71 (378)
Q Consensus 37 ~~~~~~~~~~~~~~rIvf~Gs~~~a~~~L~~L~~~ 71 (378)
+++..+.....+|+||+++|++.|+-..-..|.++
T Consensus 22 ~~~~~~~~~~~~p~KI~ViGaGsWGTALA~~la~n 56 (391)
T 4fgw_A 22 SSSSVSLKAAEKPFKVTVIGSGNWGTTIAKVVAEN 56 (391)
T ss_dssp -----------CCEEEEEECCSHHHHHHHHHHHHH
T ss_pred ccccccccccCCCCeEEEECcCHHHHHHHHHHHHc
Confidence 33333444456789999999999866555555553
No 336
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=26.88 E-value=41 Score=32.65 Aligned_cols=34 Identities=15% Similarity=0.227 Sum_probs=26.8
Q ss_pred ceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCC
Q 048078 50 KPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPP 89 (378)
Q Consensus 50 ~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~ 89 (378)
.||+++|++..+...++++.+. ++++++|.+.++
T Consensus 2 k~ilI~g~g~~~~~i~~a~~~~------G~~vv~v~~~~~ 35 (451)
T 2vpq_A 2 KKVLIANRGEIAVRIIRACRDL------GIQTVAIYSEGD 35 (451)
T ss_dssp CEEEECCCHHHHHHHHHHHHHT------TCEEEEEEEGGG
T ss_pred ceEEEeCCCHHHHHHHHHHHHc------CCEEEEEecccc
Confidence 4899999988888888888764 788888876544
No 337
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=26.84 E-value=61 Score=29.28 Aligned_cols=29 Identities=14% Similarity=0.132 Sum_probs=23.5
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEE
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVA 82 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~ 82 (378)
++|||+|+|.+.++......|.+. +++|.
T Consensus 3 ~~~~i~iiG~G~~G~~~a~~l~~~------g~~V~ 31 (301)
T 3cky_A 3 KSIKIGFIGLGAMGKPMAINLLKE------GVTVY 31 (301)
T ss_dssp -CCEEEEECCCTTHHHHHHHHHHT------TCEEE
T ss_pred CCCEEEEECccHHHHHHHHHHHHC------CCeEE
Confidence 368999999999999998888874 56764
No 338
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=26.62 E-value=1.5e+02 Score=25.67 Aligned_cols=31 Identities=19% Similarity=0.199 Sum_probs=20.5
Q ss_pred CceEEEEecCc-chHHHHHHHHHccCCCCCCceEEEEE
Q 048078 49 KKPLVFLGSPQ-VSVNVLDALFNASSSPDSIFEVAAIV 85 (378)
Q Consensus 49 ~~rIvf~Gs~~-~a~~~L~~L~~~~~~~~~~~ei~~Vv 85 (378)
..+|++.|... ++..+.+.|++. +++|+++.
T Consensus 13 ~k~vlItGasggiG~~la~~l~~~------G~~V~~~~ 44 (260)
T 3awd_A 13 NRVAIVTGGAQNIGLACVTALAEA------GARVIIAD 44 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT------TCEEEEEE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC------CCEEEEEe
Confidence 45688888544 566677778775 57766553
No 339
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=26.59 E-value=50 Score=30.65 Aligned_cols=30 Identities=17% Similarity=0.074 Sum_probs=23.8
Q ss_pred CCCceEEEEecCcchHHHHHHHHHccCCCCCCceEE
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVA 82 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~ 82 (378)
-.++||+|+|.+.++......|.++ +++|.
T Consensus 12 ~~~~kI~iIG~G~mG~ala~~L~~~------G~~V~ 41 (335)
T 1z82_A 12 HMEMRFFVLGAGSWGTVFAQMLHEN------GEEVI 41 (335)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT------TCEEE
T ss_pred ccCCcEEEECcCHHHHHHHHHHHhC------CCeEE
Confidence 4589999999999988888888875 56764
No 340
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=26.58 E-value=2.4e+02 Score=25.70 Aligned_cols=122 Identities=14% Similarity=0.136 Sum_probs=63.0
Q ss_pred CCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcH
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGED 126 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~ 126 (378)
...-+|++.|.+..+...++.+... +..++.+++..++ =.++|+++|... ++.+.+.+..
T Consensus 159 ~~g~~VlV~GaG~vG~~aiq~ak~~------G~~~vi~~~~~~~------------k~~~a~~lGa~~--~i~~~~~~~~ 218 (346)
T 4a2c_A 159 CENKNVIIIGAGTIGLLAIQCAVAL------GAKSVTAIDISSE------------KLALAKSFGAMQ--TFNSSEMSAP 218 (346)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHT------TCSEEEEEESCHH------------HHHHHHHTTCSE--EEETTTSCHH
T ss_pred CCCCEEEEECCCCcchHHHHHHHHc------CCcEEEEEechHH------------HHHHHHHcCCeE--EEeCCCCCHH
Confidence 3456899999987666565544433 4555445543332 258899999874 3444444445
Q ss_pred HHHHHHHhc-CCcEEEEecC-CCcCChhhhcC-CCCceEEEccCCCCCCCC--chHHHHHHHcCCcEEE
Q 048078 127 AFLSNLRAL-QPELCITAAY-GNILPSKFLNI-PPMGTVNIHPSLLPLYRG--AAPVQRALQGGAKETG 190 (378)
Q Consensus 127 ~~~~~l~~~-~~Dliv~~~~-~~ilp~~il~~-~~~g~iNiHpSlLP~yRG--~~pi~wai~~g~~~tG 190 (378)
+..+.+.+. .+|+++-+.- ...+.. .++. -+.|.+.+-. .++.-.- ..++...+.++-+-.|
T Consensus 219 ~~~~~~~~~~g~d~v~d~~G~~~~~~~-~~~~l~~~G~~v~~g-~~~~~~~~~~~~~~~~~~k~~~i~G 285 (346)
T 4a2c_A 219 QMQSVLRELRFNQLILETAGVPQTVEL-AVEIAGPHAQLALVG-TLHQDLHLTSATFGKILRKELTVIG 285 (346)
T ss_dssp HHHHHHGGGCSSEEEEECSCSHHHHHH-HHHHCCTTCEEEECC-CCSSCEEECHHHHHHHHHHTCEEEE
T ss_pred HHHHhhcccCCcccccccccccchhhh-hhheecCCeEEEEEe-ccCCCccccccCHHHHhhceeEEEE
Confidence 555555443 4777765542 223332 2332 3455555443 3332221 2333444555544444
No 341
>2hma_A Probable tRNA (5-methylaminomethyl-2-thiouridylat methyltransferase; alpha-beta, beta barrel, structural genomics, PSI-2; HET: MSE SAM; 2.41A {Streptococcus pneumoniae}
Probab=26.57 E-value=63 Score=31.05 Aligned_cols=66 Identities=21% Similarity=0.148 Sum_probs=41.2
Q ss_pred CCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCC-C---CccCChHHHHHHHHCCCCCcee
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDR-G---RKVLPSPVAQYALDRGFPADLI 117 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~gr-g---~~~~~~~v~~~A~~~gIp~~~v 117 (378)
.+.+||++.-|+-.-..++-.|+... +++|++|..+......+ + .......++++|+++|||++.+
T Consensus 7 ~~~~kVlVa~SGGvDSsv~a~lL~~~-----G~~V~~v~~~~~~~~~~~~~c~~~~d~~~a~~va~~lGIp~~vv 76 (376)
T 2hma_A 7 NSKTRVVVGMSGGVDSSVTALLLKEQ-----GYDVIGIFMKNWDDTDENGVCTATEDYKDVVAVADQIGIPYYSV 76 (376)
T ss_dssp GGGSEEEEECCSSHHHHHHHHHHHHT-----TCEEEEEEEECCCCCC----CHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCCeEEEEEeCHHHHHHHHHHHHHc-----CCcEEEEEEECCCcccccccCCCHHHHHHHHHHHHHhCCcEEEE
Confidence 34679999989876666666666542 68998887643211000 0 0112346788999999997643
No 342
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=26.54 E-value=1.2e+02 Score=25.18 Aligned_cols=31 Identities=16% Similarity=0.181 Sum_probs=20.3
Q ss_pred CCceEEEEecCc-chHHHHHHHHHccCCCCCCceEEEEE
Q 048078 48 RKKPLVFLGSPQ-VSVNVLDALFNASSSPDSIFEVAAIV 85 (378)
Q Consensus 48 ~~~rIvf~Gs~~-~a~~~L~~L~~~~~~~~~~~ei~~Vv 85 (378)
+||||++.|... ++..+.+.|+ . +++|+++.
T Consensus 2 ~kM~vlVtGasg~iG~~~~~~l~-~------g~~V~~~~ 33 (202)
T 3d7l_A 2 NAMKILLIGASGTLGSAVKERLE-K------KAEVITAG 33 (202)
T ss_dssp CSCEEEEETTTSHHHHHHHHHHT-T------TSEEEEEE
T ss_pred CCcEEEEEcCCcHHHHHHHHHHH-C------CCeEEEEe
Confidence 468999999654 4555556665 4 57776553
No 343
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=26.52 E-value=95 Score=27.81 Aligned_cols=29 Identities=10% Similarity=0.114 Sum_probs=19.8
Q ss_pred ceEEEEec-CcchHHHHHHHHHccCCCCCCceEEEE
Q 048078 50 KPLVFLGS-PQVSVNVLDALFNASSSPDSIFEVAAI 84 (378)
Q Consensus 50 ~rIvf~Gs-~~~a~~~L~~L~~~~~~~~~~~ei~~V 84 (378)
.++++.|. +.++..+.+.|.+. +++|+++
T Consensus 22 k~vlVTGas~gIG~aia~~La~~------G~~V~~~ 51 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEA------GWSLVLT 51 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHT------TCEEEEE
T ss_pred cEEEEeCCCCHHHHHHHHHHHHC------CCEEEEE
Confidence 56777774 44777788888875 5776654
No 344
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=26.44 E-value=1.6e+02 Score=26.14 Aligned_cols=30 Identities=13% Similarity=0.113 Sum_probs=19.8
Q ss_pred CceEEEEecC-cchHHHHHHHHHccCCCCCCceEEEE
Q 048078 49 KKPLVFLGSP-QVSVNVLDALFNASSSPDSIFEVAAI 84 (378)
Q Consensus 49 ~~rIvf~Gs~-~~a~~~L~~L~~~~~~~~~~~ei~~V 84 (378)
..+|++.|.. .++..+.+.|++. +++|+++
T Consensus 29 ~k~vlVTGas~gIG~aia~~L~~~------G~~V~~~ 59 (276)
T 2b4q_A 29 GRIALVTGGSRGIGQMIAQGLLEA------GARVFIC 59 (276)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT------TCEEEEE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC------CCEEEEE
Confidence 4568888754 4666777888775 5776543
No 345
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=26.22 E-value=1.9e+02 Score=25.03 Aligned_cols=82 Identities=13% Similarity=0.127 Sum_probs=41.4
Q ss_pred CCCceEEEEecC-cchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCc
Q 048078 47 SRKKPLVFLGSP-QVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGE 125 (378)
Q Consensus 47 ~~~~rIvf~Gs~-~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~ 125 (378)
.+..+|++.|.. .++..+.+.|++. +++|+.+....... ...+.+...+.+..+. +... ++.+
T Consensus 11 ~~~k~vlITGas~giG~~ia~~l~~~------G~~v~~~~~~~~~~--------~~~~~~~~~~~~~~~~-~~~~-Dv~~ 74 (256)
T 3ezl_A 11 MSQRIAYVTGGMGGIGTSICQRLHKD------GFRVVAGCGPNSPR--------RVKWLEDQKALGFDFY-ASEG-NVGD 74 (256)
T ss_dssp --CEEEEETTTTSHHHHHHHHHHHHT------TEEEEEEECTTCSS--------HHHHHHHHHHTTCCCE-EEEC-CTTC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC------CCEEEEEeCCCHHH--------HHHHHHHHHhcCCeeE-EEec-CCCC
Confidence 446677777754 4666677888875 57765544222111 1123444455565543 2222 3333
Q ss_pred -HHHHHHHHhc-----CCcEEEEec
Q 048078 126 -DAFLSNLRAL-----QPELCITAA 144 (378)
Q Consensus 126 -~~~~~~l~~~-----~~Dliv~~~ 144 (378)
+++.+.+++. .+|++|..+
T Consensus 75 ~~~v~~~~~~~~~~~g~id~lv~~A 99 (256)
T 3ezl_A 75 WDSTKQAFDKVKAEVGEIDVLVNNA 99 (256)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECC
Confidence 3333333332 688887665
No 346
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=26.10 E-value=62 Score=29.01 Aligned_cols=31 Identities=13% Similarity=0.077 Sum_probs=22.6
Q ss_pred ceEEEEec-CcchHHHHHHHHHccCCCCCCceEEEEEc
Q 048078 50 KPLVFLGS-PQVSVNVLDALFNASSSPDSIFEVAAIVT 86 (378)
Q Consensus 50 ~rIvf~Gs-~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt 86 (378)
|||++.|. +-++..+.+.|++. +++|.++.-
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~------G~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNAR------GHEVTLVSR 32 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHC------CCEEEEEEC
Confidence 89999996 44555566778775 689877653
No 347
>2wmy_A WZB, putative acid phosphatase WZB; hydrolase; 2.21A {Escherichia coli}
Probab=26.01 E-value=2.7e+02 Score=22.67 Aligned_cols=83 Identities=8% Similarity=0.055 Sum_probs=47.6
Q ss_pred CceEEEEecCcchHHHH-HHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 49 KKPLVFLGSPQVSVNVL-DALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L-~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
.+||+|+-+++..-+-+ ++|++... ..++|..-=|.. . .| . .......+.++++||+... ..+..+.+..
T Consensus 8 m~~VLFVC~gN~cRSpmAEal~r~~~---~~~~v~SAGt~~-~-~g--~-~~~p~a~~~l~e~Gid~~~-~~ar~l~~~~ 78 (150)
T 2wmy_A 8 FDSILVICTGNICRSPIGERLLRRLL---PSKKINSAGVGA-L-VD--H-TADESAIRVAEKNGLCLKG-HRGTKFTSAL 78 (150)
T ss_dssp CCEEEEEESSSSSHHHHHHHHHHHHC---TTSEEEEEETTC-C-TT--C-CCCHHHHHHHHHTTCCCTT-CCCCBCCHHH
T ss_pred cCEEEEEcCCchHHHHHHHHHHHHhc---CCCEEEeccccC-C-CC--C-CCCHHHHHHHHHcCCCccC-CcccCCCHHH
Confidence 34899999988655543 56666432 136654433422 1 11 1 1234567888999999321 2344454332
Q ss_pred HHHHHHhcCCcEEEEecCC
Q 048078 128 FLSNLRALQPELCITAAYG 146 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~~~ 146 (378)
+ ..+|+||++.-.
T Consensus 79 ~------~~~DlIi~m~~~ 91 (150)
T 2wmy_A 79 A------RQYDLLLVMEYS 91 (150)
T ss_dssp H------TTCSEEEESCHH
T ss_pred h------ccCCEEEEcCHH
Confidence 1 369999998754
No 348
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=25.91 E-value=1e+02 Score=27.93 Aligned_cols=34 Identities=24% Similarity=0.356 Sum_probs=24.6
Q ss_pred CceEEEEe-cCcchHHHHHHHHHccCCCCCCceEEEEEcCC
Q 048078 49 KKPLVFLG-SPQVSVNVLDALFNASSSPDSIFEVAAIVTQP 88 (378)
Q Consensus 49 ~~rIvf~G-s~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~ 88 (378)
.++|++.| ++-++..+.+.|++. +++|++++-++
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~------G~~V~~~~r~~ 43 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQK------GYAVNTTVRDP 43 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHT------TCEEEEEESCT
T ss_pred CCEEEEECCchHHHHHHHHHHHHC------CCEEEEEEcCc
Confidence 57899999 555666677888875 68887766443
No 349
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=25.87 E-value=30 Score=31.76 Aligned_cols=38 Identities=8% Similarity=0.155 Sum_probs=29.4
Q ss_pred CCCceEEEEec-CcchHHHHHHHHHccCCCCCCceEEEEEcCCC
Q 048078 47 SRKKPLVFLGS-PQVSVNVLDALFNASSSPDSIFEVAAIVTQPP 89 (378)
Q Consensus 47 ~~~~rIvf~Gs-~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~ 89 (378)
.++|||+++|. +.++...++.+.+. .++++++++-.++
T Consensus 3 ~~~mkV~V~Ga~G~mG~~~~~~~~~~-----~~~elva~~d~~~ 41 (273)
T 1dih_A 3 DANIRVAIAGAGGRMGRQLIQAALAL-----EGVQLGAALEREG 41 (273)
T ss_dssp CCBEEEEETTTTSHHHHHHHHHHHHS-----TTEECCCEECCTT
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHhC-----CCCEEEEEEecCc
Confidence 35799999996 88888888887764 3689998886544
No 350
>3kyj_B CHEY6 protein, putative histidine protein kinase; protein-protein interaction, histidine kinase, response regulator, phosphorylation; 1.40A {Rhodobacter sphaeroides} PDB: 3kyi_B*
Probab=25.83 E-value=1.8e+02 Score=22.22 Aligned_cols=77 Identities=6% Similarity=0.025 Sum_probs=43.2
Q ss_pred CCCCCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHC-CCCCceecC--C
Q 048078 44 FSVSRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDR-GFPADLIFT--P 120 (378)
Q Consensus 44 ~~~~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~-gIp~~~v~~--~ 120 (378)
.....+.+|+++..+......|+.+++.. .+++++..+.+.. ...+.+.+. ..... +.. .
T Consensus 8 ~~~~~~~~vlivdd~~~~~~~l~~~L~~~----~~~~~v~~~~~~~------------~al~~l~~~~~~dlv-ilD~~l 70 (145)
T 3kyj_B 8 HHHGSPYNVMIVDDAAMMRLYIASFIKTL----PDFKVVAQAANGQ------------EALDKLAAQPNVDLI-LLDIEM 70 (145)
T ss_dssp ---CCSEEEEEECSCHHHHHHHHHHHTTC----TTEEEEEEESSHH------------HHHHHHHHCTTCCEE-EECTTS
T ss_pred CCCCCCCeEEEEcCCHHHHHHHHHHHHhC----CCceEEEEECCHH------------HHHHHHhcCCCCCEE-EEeCCC
Confidence 34566889999998877777888777642 2566655554332 244555555 44422 222 1
Q ss_pred CCCCcHHHHHHHHhcCC
Q 048078 121 ERAGEDAFLSNLRALQP 137 (378)
Q Consensus 121 ~~~~~~~~~~~l~~~~~ 137 (378)
...+.-++++.+++..+
T Consensus 71 ~~~~g~~~~~~lr~~~~ 87 (145)
T 3kyj_B 71 PVMDGMEFLRHAKLKTR 87 (145)
T ss_dssp CCCTTCHHHHHHHHHCC
T ss_pred CCCCHHHHHHHHHhcCC
Confidence 23444567777776544
No 351
>3tlk_A Ferrienterobactin-binding periplasmic protein; ferric-enterobactin, trimer, siderophore transport, periplas space, metal transport; HET: EB4; 1.85A {Escherichia coli}
Probab=25.83 E-value=1.5e+02 Score=27.03 Aligned_cols=81 Identities=16% Similarity=0.167 Sum_probs=42.9
Q ss_pred CCCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcC-CCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCC
Q 048078 46 VSRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQ-PPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAG 124 (378)
Q Consensus 46 ~~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~-~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~ 124 (378)
...+-||+.++.. ..+.|+.- +..+++|-.. +....... .....+..+.+...++|. +. ....+
T Consensus 43 ~~~p~RIV~l~~~-----~~e~l~aL------G~~~vgv~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--vg-~~~~n 107 (326)
T 3tlk_A 43 ESQPQRIVSTSVT-----LTGSLLAI------DAPVIASGATTPNNRVADD-QGFLRQWSKVAKERKLQR--LY-IGEPS 107 (326)
T ss_dssp CSCCSSEEESCHH-----HHHHHHHT------TCCEEEEEECCTTSTTBCT-TSCBGGGHHHHHHTTCEE--EE-ESSCC
T ss_pred CCCCcEEEEECcc-----hHHHHHhC------CCCeeEEeeccccccccCc-cchhhhhhhhhhccCCCc--cC-CCCCC
Confidence 4667899987753 34555553 4578887643 21100000 001122233344567883 22 22333
Q ss_pred cHHHHHHHHhcCCcEEEEecC
Q 048078 125 EDAFLSNLRALQPELCITAAY 145 (378)
Q Consensus 125 ~~~~~~~l~~~~~Dliv~~~~ 145 (378)
+|.|.+.+||+||...+
T Consensus 108 ----~E~I~~l~PDLIi~~~~ 124 (326)
T 3tlk_A 108 ----AEAVAAQMPDLILISAT 124 (326)
T ss_dssp ----HHHHHTTCCSEEEEESS
T ss_pred ----HHHHhhCCCCEEEEeCC
Confidence 46677899999998765
No 352
>2h17_A ADP-ribosylation factor-like protein 5A; GDP, GTPase, membrane trafficking, structural genomics consortium, SGC, transport protein; HET: GDP; 1.70A {Homo sapiens} PDB: 2h16_A* 1z6y_A* 1yzg_A*
Probab=25.71 E-value=34 Score=28.10 Aligned_cols=37 Identities=5% Similarity=0.027 Sum_probs=17.6
Q ss_pred CCCCCCCCCCCCCCCCceEEEEecCcchHHHH-HHHHH
Q 048078 34 PATSSTTPSAFSVSRKKPLVFLGSPQVSVNVL-DALFN 70 (378)
Q Consensus 34 ~~~~~~~~~~~~~~~~~rIvf~Gs~~~a~~~L-~~L~~ 70 (378)
|-.+.+.+.+....+.+||+++|....+-++| ..|..
T Consensus 6 ~~~~~~~~~~~~~~~~~~i~v~G~~~~GKSsli~~l~~ 43 (181)
T 2h17_A 6 HHHHHSSGLVPRGSQEHKVIIVGLDNAGKTTILYQFSM 43 (181)
T ss_dssp ---------------CEEEEEEEETTSSHHHHHHHHHT
T ss_pred ccccccCCccCCCCceeEEEEECCCCCCHHHHHHHHhc
Confidence 33455556666777889999999998888876 44543
No 353
>3ihw_A Centg3; RAS, centaurin, GTPase, structural genomics, structural genomics consortium, SGC, alternative splicing, ANK repeat, cytoplasm, GTP-binding; 1.92A {Homo sapiens} SCOP: c.37.1.0
Probab=25.54 E-value=34 Score=28.48 Aligned_cols=36 Identities=11% Similarity=0.092 Sum_probs=21.2
Q ss_pred CCCCCCCCCCCCCCceEEEEecCcchHHHHH-HHHHc
Q 048078 36 TSSTTPSAFSVSRKKPLVFLGSPQVSVNVLD-ALFNA 71 (378)
Q Consensus 36 ~~~~~~~~~~~~~~~rIvf~Gs~~~a~~~L~-~L~~~ 71 (378)
++.+.+......+.+||+++|.+..+-++|- .|+..
T Consensus 7 ~~~~~~~~~~~~~~~ki~ivG~~~vGKSsL~~~~~~~ 43 (184)
T 3ihw_A 7 HSSGRENLYFQGPELKVGIVGNLSSGKSALVHRYLTG 43 (184)
T ss_dssp ---------CCCCEEEEEEECCTTSCHHHHHHHHHHS
T ss_pred CCCCCCCCCCCCCeeEEEEECCCCCCHHHHHHHHhcC
Confidence 4444455555677899999999988888775 56553
No 354
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=25.48 E-value=1.7e+02 Score=26.17 Aligned_cols=71 Identities=10% Similarity=0.095 Sum_probs=40.2
Q ss_pred CCceEEEEecCc-chHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCc-
Q 048078 48 RKKPLVFLGSPQ-VSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGE- 125 (378)
Q Consensus 48 ~~~rIvf~Gs~~-~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~- 125 (378)
+.++|++.|... ++..+.+.|++. +++|+++.-.++. . . .++. +.. -++.+
T Consensus 11 ~~~~vlVTGatG~iG~~l~~~L~~~------G~~V~~~~r~~~~-----~-----~-------l~~~---~~~-~Dl~d~ 63 (321)
T 2pk3_A 11 GSMRALITGVAGFVGKYLANHLTEQ------NVEVFGTSRNNEA-----K-----L-------PNVE---MIS-LDIMDS 63 (321)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESCTTC-----C-----C-------TTEE---EEE-CCTTCH
T ss_pred CcceEEEECCCChHHHHHHHHHHHC------CCEEEEEecCCcc-----c-----c-------ceee---EEE-CCCCCH
Confidence 357889998554 555566778774 5788776533221 0 0 1333 232 23444
Q ss_pred HHHHHHHHhcCCcEEEEecC
Q 048078 126 DAFLSNLRALQPELCITAAY 145 (378)
Q Consensus 126 ~~~~~~l~~~~~Dliv~~~~ 145 (378)
+.+.+.++..++|++|-++.
T Consensus 64 ~~~~~~~~~~~~d~vih~A~ 83 (321)
T 2pk3_A 64 QRVKKVISDIKPDYIFHLAA 83 (321)
T ss_dssp HHHHHHHHHHCCSEEEECCS
T ss_pred HHHHHHHHhcCCCEEEEcCc
Confidence 34455666667999987764
No 355
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=25.47 E-value=43 Score=31.83 Aligned_cols=33 Identities=24% Similarity=0.371 Sum_probs=25.9
Q ss_pred CCceEEEEe-cCcchHHHHHHHHHccCCCCCCceEEEEE
Q 048078 48 RKKPLVFLG-SPQVSVNVLDALFNASSSPDSIFEVAAIV 85 (378)
Q Consensus 48 ~~~rIvf~G-s~~~a~~~L~~L~~~~~~~~~~~ei~~Vv 85 (378)
+++||+++| ++..+...++.|.+. ..++|+++.
T Consensus 7 M~~kV~IiGAtG~iG~~llr~L~~~-----p~~ev~~i~ 40 (354)
T 1ys4_A 7 MKIKVGVLGATGSVGQRFVQLLADH-----PMFELTALA 40 (354)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTC-----SSEEEEEEE
T ss_pred ccceEEEECcCCHHHHHHHHHHhcC-----CCCEEEEEE
Confidence 458999999 898888888877654 358888876
No 356
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=25.43 E-value=69 Score=30.60 Aligned_cols=77 Identities=18% Similarity=0.177 Sum_probs=43.2
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCc-eEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCc-H
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIF-EVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGE-D 126 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~-ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~-~ 126 (378)
.-+|+++|.+.++..+++.+... +. +|+++...+. -.++|+++|... ++...+.+- +
T Consensus 214 g~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi~~~~~~~-------------~~~~~~~lGa~~--vi~~~~~~~~~ 272 (404)
T 3ip1_A 214 GDNVVILGGGPIGLAAVAILKHA------GASKVILSEPSEV-------------RRNLAKELGADH--VIDPTKENFVE 272 (404)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT------TCSEEEEECSCHH-------------HHHHHHHHTCSE--EECTTTSCHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHc------CCCEEEEECCCHH-------------HHHHHHHcCCCE--EEcCCCCCHHH
Confidence 45899999986666665554432 56 5554433322 257889999763 344332221 1
Q ss_pred HHHHHHHhcCCcEEEEecCC
Q 048078 127 AFLSNLRALQPELCITAAYG 146 (378)
Q Consensus 127 ~~~~~l~~~~~Dliv~~~~~ 146 (378)
.+.+......+|+++-+.-+
T Consensus 273 ~i~~~t~g~g~D~vid~~g~ 292 (404)
T 3ip1_A 273 AVLDYTNGLGAKLFLEATGV 292 (404)
T ss_dssp HHHHHTTTCCCSEEEECSSC
T ss_pred HHHHHhCCCCCCEEEECCCC
Confidence 22222223479999876543
No 357
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=25.36 E-value=2e+02 Score=25.33 Aligned_cols=31 Identities=3% Similarity=-0.060 Sum_probs=20.5
Q ss_pred CceEEEEecCc-chHHHHHHHHHccCCCCCCceEEEEE
Q 048078 49 KKPLVFLGSPQ-VSVNVLDALFNASSSPDSIFEVAAIV 85 (378)
Q Consensus 49 ~~rIvf~Gs~~-~a~~~L~~L~~~~~~~~~~~ei~~Vv 85 (378)
..+|++.|... ++..+.+.|++. +++|+++.
T Consensus 31 ~k~vlITGasggIG~~la~~L~~~------G~~V~~~~ 62 (272)
T 1yb1_A 31 GEIVLITGAGHGIGRLTAYEFAKL------KSKLVLWD 62 (272)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT------TCEEEEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHC------CCEEEEEE
Confidence 46788888544 566677778775 57765543
No 358
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=25.31 E-value=53 Score=31.07 Aligned_cols=33 Identities=24% Similarity=0.225 Sum_probs=27.8
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEc
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVT 86 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt 86 (378)
++||++.|.+..+..+++.|.+. ..++|++|..
T Consensus 3 ~ikVgI~G~G~iGr~~~R~l~~~-----~~vevvaI~d 35 (335)
T 1u8f_O 3 KVKVGVNGFGRIGRLVTRAAFNS-----GKVDIVAIND 35 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-----CSSEEEEEEC
T ss_pred ceEEEEEccCHHHHHHHHHHHcC-----CCcEEEEecC
Confidence 57999999999999999998875 3699998864
No 359
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A*
Probab=25.30 E-value=70 Score=30.55 Aligned_cols=87 Identities=16% Similarity=0.138 Sum_probs=48.2
Q ss_pred ceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecC-CCC-CCc--
Q 048078 50 KPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFT-PER-AGE-- 125 (378)
Q Consensus 50 ~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~-~~~-~~~-- 125 (378)
.+| ++|.+. ...|..+++.. +.+-+.|||++.-.+ .| ....+.+..++.|+.+. ++. .+. ...
T Consensus 10 ~~i-~~G~g~--~~~l~~~l~~~-----g~~~~livtd~~~~~-~g---~~~~v~~~L~~~g~~~~-~~~~~~~~p~~~~ 76 (386)
T 1rrm_A 10 ETA-WFGRGA--VGALTDEVKRR-----GYQKALIVTDKTLVQ-CG---VVAKVTDKMDAAGLAWA-IYDGVVPNPTITV 76 (386)
T ss_dssp SEE-EESTTG--GGGHHHHHHHH-----TCCEEEEECBHHHHH-TT---HHHHHHHHHHHTTCEEE-EECBCCSSCBHHH
T ss_pred ceE-EECcCH--HHHHHHHHHHc-----CCCEEEEEECcchhh-ch---HHHHHHHHHHHcCCeEE-EECCccCCCCHHH
Confidence 355 688874 34444444431 234578888642110 00 12346666677898854 232 111 111
Q ss_pred -HHHHHHHHhcCCcEEEEecCCCcC
Q 048078 126 -DAFLSNLRALQPELCITAAYGNIL 149 (378)
Q Consensus 126 -~~~~~~l~~~~~Dliv~~~~~~il 149 (378)
.+..+.+++.++|++|.+|=|..+
T Consensus 77 v~~~~~~~~~~~~d~IIavGGGsv~ 101 (386)
T 1rrm_A 77 VKEGLGVFQNSGADYLIAIGGGSPQ 101 (386)
T ss_dssp HHHHHHHHHHHTCSEEEEEESHHHH
T ss_pred HHHHHHHHHhcCcCEEEEeCChHHH
Confidence 344566778899999999866555
No 360
>2fek_A Low molecular weight protein-tyrosine- phosphatase WZB; phosphate binding, hydrolase; NMR {Escherichia coli K12}
Probab=25.16 E-value=3e+02 Score=22.97 Aligned_cols=83 Identities=6% Similarity=0.015 Sum_probs=47.1
Q ss_pred CceEEEEecCcchHHHH-HHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 49 KKPLVFLGSPQVSVNVL-DALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L-~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
.+||+|+-+++..-+-+ ++|++... ..++|..-=|.+ . .| .. ......+.++++||+... ..+..+.+..
T Consensus 22 m~~VLFVCtgN~cRSpmAEal~r~~~---~~~~v~SAGt~~-~-~g--~~-~~p~a~~vl~e~Gid~s~-~~sr~l~~~~ 92 (167)
T 2fek_A 22 FNNILVVCVGNICRSPTAERLLQRYH---PELKVESAGLGA-L-VG--KG-ADPTAISVAAEHQLSLEG-HCARQISRRL 92 (167)
T ss_dssp CCEEEEEESSSSSHHHHHHHHHHHHC---TTCEEEEEETTC-C-TT--CC-CCHHHHHHHHHTTCCCTT-CCCCBCCHHH
T ss_pred cCeEEEEcCCcHHHHHHHHHHHHHhc---CCeEEEeeecCC-C-CC--CC-CCHHHHHHHHHcCCCccC-CcCccCCHHH
Confidence 35999999988655543 66666432 135554333322 1 11 11 234567788899999321 2344454332
Q ss_pred HHHHHHhcCCcEEEEecCC
Q 048078 128 FLSNLRALQPELCITAAYG 146 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~~~ 146 (378)
+ ..+|+||++.-.
T Consensus 93 ~------~~~DlIitM~~~ 105 (167)
T 2fek_A 93 C------RNYDLILTMEKR 105 (167)
T ss_dssp H------HHSSEEEESCHH
T ss_pred h------ccCCEEEEcCHH
Confidence 2 258999998753
No 361
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=25.13 E-value=1e+02 Score=29.01 Aligned_cols=75 Identities=12% Similarity=0.054 Sum_probs=43.2
Q ss_pred ceEEEEecCcchHHHHHHHHHccCCCCCC-ceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHHH
Q 048078 50 KPLVFLGSPQVSVNVLDALFNASSSPDSI-FEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAF 128 (378)
Q Consensus 50 ~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~-~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~~ 128 (378)
-+|++.|++.++...++.+... + .+|+++...+. -.++|+++|... ++......++++
T Consensus 197 ~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi~~~~~~~-------------~~~~~~~lGa~~--vi~~~~~~~~~~ 255 (380)
T 1vj0_A 197 KTVVIQGAGPLGLFGVVIARSL------GAENVIVIAGSPN-------------RLKLAEEIGADL--TLNRRETSVEER 255 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TBSEEEEEESCHH-------------HHHHHHHTTCSE--EEETTTSCHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHc------CCceEEEEcCCHH-------------HHHHHHHcCCcE--EEeccccCcchH
Confidence 4799999876666665544332 5 46766553322 257788899763 332221113455
Q ss_pred HHHHHh----cCCcEEEEecC
Q 048078 129 LSNLRA----LQPELCITAAY 145 (378)
Q Consensus 129 ~~~l~~----~~~Dliv~~~~ 145 (378)
.+.+++ ..+|++|-+.-
T Consensus 256 ~~~v~~~~~g~g~Dvvid~~g 276 (380)
T 1vj0_A 256 RKAIMDITHGRGADFILEATG 276 (380)
T ss_dssp HHHHHHHTTTSCEEEEEECSS
T ss_pred HHHHHHHhCCCCCcEEEECCC
Confidence 555543 26898887653
No 362
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=25.09 E-value=2.2e+02 Score=21.43 Aligned_cols=98 Identities=12% Similarity=0.179 Sum_probs=53.7
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecC--CCCCCc
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFT--PERAGE 125 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~--~~~~~~ 125 (378)
.++||+++-.+......|+.+++. .++++ ..+.+. ....+.+++...... +.. ....+.
T Consensus 5 ~~~~iLivdd~~~~~~~l~~~l~~-----~g~~v-~~~~~~------------~~a~~~l~~~~~dlv-i~d~~l~~~~g 65 (140)
T 3grc_A 5 PRPRILICEDDPDIARLLNLMLEK-----GGFDS-DMVHSA------------AQALEQVARRPYAAM-TVDLNLPDQDG 65 (140)
T ss_dssp CCSEEEEECSCHHHHHHHHHHHHH-----TTCEE-EEECSH------------HHHHHHHHHSCCSEE-EECSCCSSSCH
T ss_pred CCCCEEEEcCCHHHHHHHHHHHHH-----CCCeE-EEECCH------------HHHHHHHHhCCCCEE-EEeCCCCCCCH
Confidence 368999999988777888887775 25664 233322 134556666665432 222 223455
Q ss_pred HHHHHHHHh--cCCcEEEEecCCCcCChhhh-cCCCCceEEE
Q 048078 126 DAFLSNLRA--LQPELCITAAYGNILPSKFL-NIPPMGTVNI 164 (378)
Q Consensus 126 ~~~~~~l~~--~~~Dliv~~~~~~ilp~~il-~~~~~g~iNi 164 (378)
-++++.|++ ..+++-|++--..--+.... .....|+..+
T Consensus 66 ~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~~g~~~~ 107 (140)
T 3grc_A 66 VSLIRALRRDSRTRDLAIVVVSANAREGELEFNSQPLAVSTW 107 (140)
T ss_dssp HHHHHHHHTSGGGTTCEEEEECTTHHHHHHHHCCTTTCCCEE
T ss_pred HHHHHHHHhCcccCCCCEEEEecCCChHHHHHHhhhcCCCEE
Confidence 677888876 44444333322222223333 4555555544
No 363
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=25.06 E-value=2.3e+02 Score=26.85 Aligned_cols=87 Identities=21% Similarity=0.206 Sum_probs=49.7
Q ss_pred eEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCC-CCccCChHHHHHHHHCCCCCceecC-CCC-CCc--
Q 048078 51 PLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDR-GRKVLPSPVAQYALDRGFPADLIFT-PER-AGE-- 125 (378)
Q Consensus 51 rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~gr-g~~~~~~~v~~~A~~~gIp~~~v~~-~~~-~~~-- 125 (378)
+| ++|.+. ...|..+++.. +.+-++|||++.-..-. | ....+.+..++.|+.+. ++. .+. ...
T Consensus 13 ~i-~~G~g~--~~~l~~~l~~~-----g~~~~livtd~~~~~~~~g---~~~~v~~~L~~~g~~~~-~~~~~~~~p~~~~ 80 (387)
T 3bfj_A 13 VN-FFGPNA--ISVVGERCQLL-----GGKKALLVTDKGLRAIKDG---AVDKTLHYLREAGIEVA-IFDGVEPNPKDTN 80 (387)
T ss_dssp EE-EESTTG--GGGHHHHHHHT-----TCSEEEEECCTTTC--CCS---SHHHHHHHHHHTTCEEE-EECCCCSSCBHHH
T ss_pred eE-EECCCH--HHHHHHHHHHc-----CCCEEEEEECcchhhccch---HHHHHHHHHHHcCCeEE-EECCccCCCCHHH
Confidence 44 688874 34454455432 23457888876432100 0 23456777778899854 332 111 111
Q ss_pred -HHHHHHHHhcCCcEEEEecCCCcC
Q 048078 126 -DAFLSNLRALQPELCITAAYGNIL 149 (378)
Q Consensus 126 -~~~~~~l~~~~~Dliv~~~~~~il 149 (378)
++..+.+++.++|++|.+|=|..+
T Consensus 81 v~~~~~~~~~~~~d~IIavGGGsv~ 105 (387)
T 3bfj_A 81 VRDGLAVFRREQCDIIVTVGGGSPH 105 (387)
T ss_dssp HHHHHHHHHHTTCCEEEEEESHHHH
T ss_pred HHHHHHHHHhcCCCEEEEeCCcchh
Confidence 344567788899999998866555
No 364
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=25.02 E-value=1.5e+02 Score=26.11 Aligned_cols=30 Identities=7% Similarity=0.120 Sum_probs=21.9
Q ss_pred CceEEEEe---cCcchHHHHHHHHHccCCCCCCceEEEE
Q 048078 49 KKPLVFLG---SPQVSVNVLDALFNASSSPDSIFEVAAI 84 (378)
Q Consensus 49 ~~rIvf~G---s~~~a~~~L~~L~~~~~~~~~~~ei~~V 84 (378)
..++++.| ++.++..+.+.|.+. +++|+.+
T Consensus 7 ~k~vlVTGa~~s~gIG~aia~~l~~~------G~~V~~~ 39 (269)
T 2h7i_A 7 GKRILVSGIITDSSIAFHIARVAQEQ------GAQLVLT 39 (269)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHT------TCEEEEE
T ss_pred CCEEEEECCCCCCchHHHHHHHHHHC------CCEEEEE
Confidence 35688888 577888888888875 5776544
No 365
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=24.94 E-value=1.2e+02 Score=26.68 Aligned_cols=34 Identities=12% Similarity=0.136 Sum_probs=20.6
Q ss_pred CCCCCceEEEEecCc-chHHHHHHHHHccCCCCCCceEEEE
Q 048078 45 SVSRKKPLVFLGSPQ-VSVNVLDALFNASSSPDSIFEVAAI 84 (378)
Q Consensus 45 ~~~~~~rIvf~Gs~~-~a~~~L~~L~~~~~~~~~~~ei~~V 84 (378)
++..++||++.|... ++..+.+.|++. +++|+++
T Consensus 8 ~~~~~~~vlVtGatG~iG~~l~~~L~~~------g~~V~~~ 42 (292)
T 1vl0_A 8 HHHHHMKILITGANGQLGREIQKQLKGK------NVEVIPT 42 (292)
T ss_dssp ----CEEEEEESTTSHHHHHHHHHHTTS------SEEEEEE
T ss_pred cccccceEEEECCCChHHHHHHHHHHhC------CCeEEec
Confidence 345689999999655 455555667653 5777654
No 366
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=24.87 E-value=1.4e+02 Score=27.88 Aligned_cols=74 Identities=14% Similarity=0.040 Sum_probs=41.2
Q ss_pred ceEEEEecCcchHHHHHHHHHccCCCCCCc-eEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHHH
Q 048078 50 KPLVFLGSPQVSVNVLDALFNASSSPDSIF-EVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAF 128 (378)
Q Consensus 50 ~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~-ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~~ 128 (378)
-+|+++|.+..+...++.+... +. +|+++...+.+ .++|+++|... ++...+. ++++
T Consensus 197 ~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi~~~~~~~~-------------~~~a~~lGa~~--vi~~~~~-~~~~ 254 (376)
T 1e3i_A 197 STCAVFGLGCVGLSAIIGCKIA------GASRIIAIDINGEK-------------FPKAKALGATD--CLNPREL-DKPV 254 (376)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCSEEEEECSCGGG-------------HHHHHHTTCSE--EECGGGC-SSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHc------CCCeEEEEcCCHHH-------------HHHHHHhCCcE--EEccccc-cchH
Confidence 4899999886666665544332 45 55554333322 57888999863 3332211 1122
Q ss_pred HHHHH---hcCCcEEEEecC
Q 048078 129 LSNLR---ALQPELCITAAY 145 (378)
Q Consensus 129 ~~~l~---~~~~Dliv~~~~ 145 (378)
.+.++ .-.+|+++-+.-
T Consensus 255 ~~~v~~~~~~g~Dvvid~~G 274 (376)
T 1e3i_A 255 QDVITELTAGGVDYSLDCAG 274 (376)
T ss_dssp HHHHHHHHTSCBSEEEESSC
T ss_pred HHHHHHHhCCCccEEEECCC
Confidence 23332 237999987654
No 367
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=24.84 E-value=2.4e+02 Score=24.40 Aligned_cols=82 Identities=11% Similarity=0.117 Sum_probs=46.1
Q ss_pred CCCCCceEEEEec---CcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCC
Q 048078 45 SVSRKKPLVFLGS---PQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPE 121 (378)
Q Consensus 45 ~~~~~~rIvf~Gs---~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~ 121 (378)
...+..+|++.|. +.++..+.+.|.+. +++|+.+.-+ +. ....+.+++++.+- .. ++..
T Consensus 10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~------G~~V~~~~r~-~~--------~~~~~~~~~~~~~~-~~-~~~~- 71 (271)
T 3ek2_A 10 GFLDGKRILLTGLLSNRSIAYGIAKACKRE------GAELAFTYVG-DR--------FKDRITEFAAEFGS-EL-VFPC- 71 (271)
T ss_dssp CTTTTCEEEECCCCSTTSHHHHHHHHHHHT------TCEEEEEESS-GG--------GHHHHHHHHHHTTC-CC-EEEC-
T ss_pred cccCCCEEEEeCCCCCCcHHHHHHHHHHHc------CCCEEEEecc-hh--------hHHHHHHHHHHcCC-cE-EEEC-
Confidence 3455778999994 45777788888875 5776654422 11 11345666666653 22 3332
Q ss_pred CCCc-HHHHHHHHhc-----CCcEEEEec
Q 048078 122 RAGE-DAFLSNLRAL-----QPELCITAA 144 (378)
Q Consensus 122 ~~~~-~~~~~~l~~~-----~~Dliv~~~ 144 (378)
++.+ +++.+.+++. .+|++|..+
T Consensus 72 Dv~~~~~v~~~~~~~~~~~g~id~lv~nA 100 (271)
T 3ek2_A 72 DVADDAQIDALFASLKTHWDSLDGLVHSI 100 (271)
T ss_dssp CTTCHHHHHHHHHHHHHHCSCEEEEEECC
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 3333 3333333332 688888655
No 368
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=24.78 E-value=1.6e+02 Score=25.96 Aligned_cols=77 Identities=9% Similarity=0.022 Sum_probs=41.6
Q ss_pred CceEEEEecC-cchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcH-
Q 048078 49 KKPLVFLGSP-QVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGED- 126 (378)
Q Consensus 49 ~~rIvf~Gs~-~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~- 126 (378)
.++|++.|.. .++..+.+.|++. +++|+++.-+.+ .+.+.+++.+-..+ ++.. ++.+.
T Consensus 5 ~k~vlVTGas~gIG~~~a~~l~~~------G~~V~~~~r~~~------------~~~~~~~~~~~~~~-~~~~-Dv~~~~ 64 (281)
T 3m1a_A 5 AKVWLVTGASSGFGRAIAEAAVAA------GDTVIGTARRTE------------ALDDLVAAYPDRAE-AISL-DVTDGE 64 (281)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHT------TCEEEEEESSGG------------GGHHHHHHCTTTEE-EEEC-CTTCHH
T ss_pred CcEEEEECCCChHHHHHHHHHHHC------CCEEEEEeCCHH------------HHHHHHHhccCCce-EEEe-eCCCHH
Confidence 3467777754 4666677888875 577765532221 24556666554432 2222 34343
Q ss_pred HHHHHHHhc-----CCcEEEEecC
Q 048078 127 AFLSNLRAL-----QPELCITAAY 145 (378)
Q Consensus 127 ~~~~~l~~~-----~~Dliv~~~~ 145 (378)
.+.+.+++. ++|++|..+-
T Consensus 65 ~~~~~~~~~~~~~g~id~lv~~Ag 88 (281)
T 3m1a_A 65 RIDVVAADVLARYGRVDVLVNNAG 88 (281)
T ss_dssp HHHHHHHHHHHHHSCCSEEEECCC
T ss_pred HHHHHHHHHHHhCCCCCEEEECCC
Confidence 333334333 7999887653
No 369
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=24.72 E-value=78 Score=29.96 Aligned_cols=76 Identities=8% Similarity=0.064 Sum_probs=43.4
Q ss_pred CceEEEE--ecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCC-c
Q 048078 49 KKPLVFL--GSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAG-E 125 (378)
Q Consensus 49 ~~rIvf~--Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~-~ 125 (378)
.-+|++. |++..+..+++.+... +.+|+++...+. =.+++++.|... ++...+.+ .
T Consensus 171 g~~vlV~gag~G~vG~~a~q~a~~~------Ga~Vi~~~~~~~-------------~~~~~~~lGa~~--~~~~~~~~~~ 229 (379)
T 3iup_A 171 GHSALVHTAAASNLGQMLNQICLKD------GIKLVNIVRKQE-------------QADLLKAQGAVH--VCNAASPTFM 229 (379)
T ss_dssp TCSCEEESSTTSHHHHHHHHHHHHH------TCCEEEEESSHH-------------HHHHHHHTTCSC--EEETTSTTHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHHHC------CCEEEEEECCHH-------------HHHHHHhCCCcE--EEeCCChHHH
Confidence 3478888 6776666666554433 567776654332 257888898764 33332221 1
Q ss_pred HHHHHHHHhcCCcEEEEecC
Q 048078 126 DAFLSNLRALQPELCITAAY 145 (378)
Q Consensus 126 ~~~~~~l~~~~~Dliv~~~~ 145 (378)
+++.+......+|+++-+.-
T Consensus 230 ~~v~~~t~~~g~d~v~d~~g 249 (379)
T 3iup_A 230 QDLTEALVSTGATIAFDATG 249 (379)
T ss_dssp HHHHHHHHHHCCCEEEESCE
T ss_pred HHHHHHhcCCCceEEEECCC
Confidence 22333333458999987654
No 370
>3lp8_A Phosphoribosylamine-glycine ligase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.15A {Ehrlichia chaffeensis}
Probab=24.71 E-value=1.6e+02 Score=28.50 Aligned_cols=25 Identities=12% Similarity=0.126 Sum_probs=15.4
Q ss_pred CCCCceEEEEecCcchHHHHHHHHH
Q 048078 46 VSRKKPLVFLGSPQVSVNVLDALFN 70 (378)
Q Consensus 46 ~~~~~rIvf~Gs~~~a~~~L~~L~~ 70 (378)
...+|||+++|++.-......+|.+
T Consensus 18 ~p~~m~ilvlG~ggre~ala~~l~~ 42 (442)
T 3lp8_A 18 GPGSMNVLVIGSGGREHSMLHHIRK 42 (442)
T ss_dssp --CCEEEEEEECSHHHHHHHHHHTT
T ss_pred CCCCCEEEEECCChHHHHHHHHHHh
Confidence 3457999999998433344455544
No 371
>2a9k_A RAS-related protein RAL-A; bacterial ADP-ribosyltransferase, RAL, RHO, GD binding; HET: GDP NAD; 1.73A {Homo sapiens} SCOP: c.37.1.8 PDB: 2a78_A*
Probab=24.63 E-value=32 Score=28.02 Aligned_cols=32 Identities=13% Similarity=0.104 Sum_probs=18.3
Q ss_pred CCCCCCCCCCCceEEEEecCcchHHHH-HHHHH
Q 048078 39 TTPSAFSVSRKKPLVFLGSPQVSVNVL-DALFN 70 (378)
Q Consensus 39 ~~~~~~~~~~~~rIvf~Gs~~~a~~~L-~~L~~ 70 (378)
..+++......+||+++|....+-++| ..|..
T Consensus 8 ~~~~~~~~~~~~ki~v~G~~~~GKSsli~~l~~ 40 (187)
T 2a9k_A 8 GGGGSQNSLALHKVIMVGSGGVGKSALTLQFMY 40 (187)
T ss_dssp ---------CEEEEEEECSTTSSHHHHHHHHHH
T ss_pred CCCcCCCCCCceEEEEECCCCCCHHHHHHHHhh
Confidence 333344455679999999988888776 55654
No 372
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=24.47 E-value=53 Score=31.47 Aligned_cols=33 Identities=24% Similarity=0.174 Sum_probs=26.5
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEc
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVT 86 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt 86 (378)
++||++.|.+..+..+++.|.+. ..+||++|-.
T Consensus 17 ~ikVgI~G~G~iGr~llR~l~~~-----p~veivaind 49 (354)
T 3cps_A 17 QGTLGINGFGRIGRLVLRACMER-----NDITVVAIND 49 (354)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTC-----SSCEEEEEEC
T ss_pred ceEEEEECCCHHHHHHHHHHHcC-----CCeEEEEecC
Confidence 67999999998888888888764 3699988764
No 373
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=24.37 E-value=57 Score=30.79 Aligned_cols=38 Identities=8% Similarity=0.063 Sum_probs=20.6
Q ss_pred CCCCCCCCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEE
Q 048078 41 PSAFSVSRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIV 85 (378)
Q Consensus 41 ~~~~~~~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vv 85 (378)
+++....++++|+++|.+-.+..+...|.+. +++|+ |+
T Consensus 15 ~~~~~~~~~~dV~IVGaG~aGl~~A~~La~~------G~~V~-v~ 52 (407)
T 3rp8_A 15 GENLYFQGHMKAIVIGAGIGGLSAAVALKQS------GIDCD-VY 52 (407)
T ss_dssp --------CCEEEEECCSHHHHHHHHHHHHT------TCEEE-EE
T ss_pred CCcccCCCCCEEEEECCCHHHHHHHHHHHhC------CCCEE-EE
Confidence 3444455679999999996555555556553 57654 44
No 374
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=24.30 E-value=2.2e+02 Score=21.64 Aligned_cols=25 Identities=0% Similarity=0.013 Sum_probs=17.9
Q ss_pred CCCceEEEEecCcchHHHHHHHHHc
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNA 71 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~ 71 (378)
..++||+++..+......|+.+++.
T Consensus 6 ~~~~~iLivd~~~~~~~~l~~~L~~ 30 (147)
T 2zay_A 6 GKWWRIMLVDTQLPALAASISALSQ 30 (147)
T ss_dssp --CEEEEEECTTGGGGHHHHHHHHH
T ss_pred CCCceEEEEeCCHHHHHHHHHHHHH
Confidence 4578888888887777777777764
No 375
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=24.14 E-value=1.8e+02 Score=27.18 Aligned_cols=74 Identities=12% Similarity=0.160 Sum_probs=42.8
Q ss_pred CCceEEEEec-CcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcH
Q 048078 48 RKKPLVFLGS-PQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGED 126 (378)
Q Consensus 48 ~~~rIvf~Gs-~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~ 126 (378)
..-+|++.|. +.++..+++.+... +.+|++++ .+.+ .++|+++|... ++...+.
T Consensus 164 ~g~~VlV~Ga~G~vG~~a~qla~~~------Ga~Vi~~~-~~~~-------------~~~~~~lGa~~--vi~~~~~--- 218 (371)
T 3gqv_A 164 KPVYVLVYGGSTATATVTMQMLRLS------GYIPIATC-SPHN-------------FDLAKSRGAEE--VFDYRAP--- 218 (371)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHT------TCEEEEEE-CGGG-------------HHHHHHTTCSE--EEETTST---
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHC------CCEEEEEe-CHHH-------------HHHHHHcCCcE--EEECCCc---
Confidence 3457999997 55555555544332 57777664 3221 57899999763 3333322
Q ss_pred HHHHHHHh---cCCcEEEEecCC
Q 048078 127 AFLSNLRA---LQPELCITAAYG 146 (378)
Q Consensus 127 ~~~~~l~~---~~~Dliv~~~~~ 146 (378)
++.+.+++ -.+|+++-+.-+
T Consensus 219 ~~~~~v~~~t~g~~d~v~d~~g~ 241 (371)
T 3gqv_A 219 NLAQTIRTYTKNNLRYALDCITN 241 (371)
T ss_dssp THHHHHHHHTTTCCCEEEESSCS
T ss_pred hHHHHHHHHccCCccEEEECCCc
Confidence 23333333 358998876543
No 376
>2yrx_A Phosphoribosylglycinamide synthetase; glycinamide ribonucleotide synthetase, GAR synthetase; HET: AMP; 1.90A {Geobacillus kaustophilus} PDB: 2yrw_A* 2ys6_A* 2ys7_A
Probab=24.01 E-value=1.3e+02 Score=29.10 Aligned_cols=13 Identities=8% Similarity=0.222 Sum_probs=10.6
Q ss_pred CCCceEEEEecCc
Q 048078 47 SRKKPLVFLGSPQ 59 (378)
Q Consensus 47 ~~~~rIvf~Gs~~ 59 (378)
..+|||+++|++.
T Consensus 19 ~~~~~iliiG~g~ 31 (451)
T 2yrx_A 19 QSHMNVLVIGRGG 31 (451)
T ss_dssp CSSEEEEEEECSH
T ss_pred CCCCEEEEECCCH
Confidence 3578999999983
No 377
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=23.95 E-value=1.9e+02 Score=26.59 Aligned_cols=78 Identities=15% Similarity=0.224 Sum_probs=42.3
Q ss_pred eEEEE--ecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCC-cHH
Q 048078 51 PLVFL--GSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAG-EDA 127 (378)
Q Consensus 51 rIvf~--Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~-~~~ 127 (378)
+.+++ |++.++..+.+.+... +.+|+++..++.+ .++++++|... ++...+.+ .+.
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~------Ga~Vi~~~~~~~~-------------~~~~~~~Ga~~--~~~~~~~~~~~~ 224 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEE------GFRPIVTVRRDEQ-------------IALLKDIGAAH--VLNEKAPDFEAT 224 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHH------TCEEEEEESCGGG-------------HHHHHHHTCSE--EEETTSTTHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC------CCEEEEEeCCHHH-------------HHHHHHcCCCE--EEECCcHHHHHH
Confidence 34444 7777766666655443 5677666543322 46778888663 33332221 122
Q ss_pred HHHHHHhcCCcEEEEecCCCcC
Q 048078 128 FLSNLRALQPELCITAAYGNIL 149 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~~~~il 149 (378)
+.+......+|+++-+.-+..+
T Consensus 225 v~~~~~~~g~D~vid~~g~~~~ 246 (349)
T 3pi7_A 225 LREVMKAEQPRIFLDAVTGPLA 246 (349)
T ss_dssp HHHHHHHHCCCEEEESSCHHHH
T ss_pred HHHHhcCCCCcEEEECCCChhH
Confidence 2233333589999876654433
No 378
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=23.93 E-value=1.3e+02 Score=28.18 Aligned_cols=75 Identities=11% Similarity=0.079 Sum_probs=41.7
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCc-eEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIF-EVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~-ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
--+|+++|.+.++...++.+... +. +|+++...+.+ .++|+++|... ++...+. +++
T Consensus 192 g~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi~~~~~~~~-------------~~~a~~lGa~~--vi~~~~~-~~~ 249 (373)
T 1p0f_A 192 GSTCAVFGLGGVGFSAIVGCKAA------GASRIIGVGTHKDK-------------FPKAIELGATE--CLNPKDY-DKP 249 (373)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH------TCSEEEEECSCGGG-------------HHHHHHTTCSE--EECGGGC-SSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHc------CCCeEEEECCCHHH-------------HHHHHHcCCcE--EEecccc-cch
Confidence 34899999886666665544332 45 55544333221 57888999863 3333211 112
Q ss_pred HHHHHHh---cCCcEEEEecC
Q 048078 128 FLSNLRA---LQPELCITAAY 145 (378)
Q Consensus 128 ~~~~l~~---~~~Dliv~~~~ 145 (378)
+.+.+++ -.+|+++-+.-
T Consensus 250 ~~~~i~~~t~gg~Dvvid~~g 270 (373)
T 1p0f_A 250 IYEVICEKTNGGVDYAVECAG 270 (373)
T ss_dssp HHHHHHHHTTSCBSEEEECSC
T ss_pred HHHHHHHHhCCCCCEEEECCC
Confidence 3333332 27899987653
No 379
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=23.89 E-value=1.7e+02 Score=26.87 Aligned_cols=35 Identities=14% Similarity=0.079 Sum_probs=25.7
Q ss_pred CCCceEEEEec-CcchHHHHHHHHHccCCCCCCceEEEEEcC
Q 048078 47 SRKKPLVFLGS-PQVSVNVLDALFNASSSPDSIFEVAAIVTQ 87 (378)
Q Consensus 47 ~~~~rIvf~Gs-~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~ 87 (378)
.+..||++.|- +..+...++.+++. ++++++.|.+
T Consensus 5 ~~~~~VaVvGasG~~G~~~~~~l~~~------g~~~v~~VnP 40 (288)
T 1oi7_A 5 NRETRVLVQGITGREGQFHTKQMLTY------GTKIVAGVTP 40 (288)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHH------TCEEEEEECT
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHHc------CCeEEEEECC
Confidence 35689999995 77777788888774 5776666654
No 380
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=23.85 E-value=2.4e+02 Score=26.34 Aligned_cols=18 Identities=11% Similarity=0.150 Sum_probs=12.8
Q ss_pred HHHHHHhcCCcEEEEecC
Q 048078 128 FLSNLRALQPELCITAAY 145 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~~ 145 (378)
+.+.+++.+||++|+-.+
T Consensus 96 l~~~l~~~~pD~Vi~d~~ 113 (430)
T 2iyf_A 96 LADAYADDIPDLVLHDIT 113 (430)
T ss_dssp HHHHHTTSCCSEEEEETT
T ss_pred HHHHhhccCCCEEEECCc
Confidence 345566789999997654
No 381
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=23.75 E-value=55 Score=30.98 Aligned_cols=33 Identities=21% Similarity=0.109 Sum_probs=27.0
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEc
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVT 86 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt 86 (378)
++||++.|.+..+..+++.|+++ ..++|++|-.
T Consensus 1 ~ikVgI~G~G~iG~~l~R~l~~~-----~~veiv~i~~ 33 (330)
T 1gad_O 1 TIKVGINGFGRIGRIVFRAAQKR-----SDIEIVAIND 33 (330)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTC-----SSEEEEEEEC
T ss_pred CeEEEEECcCHHHHHHHHHHHcC-----CCeEEEEEcC
Confidence 37999999999888888988765 3689988754
No 382
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=23.71 E-value=1.1e+02 Score=27.04 Aligned_cols=73 Identities=14% Similarity=0.140 Sum_probs=39.9
Q ss_pred ceEEEEec-CcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH-
Q 048078 50 KPLVFLGS-PQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA- 127 (378)
Q Consensus 50 ~rIvf~Gs-~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~- 127 (378)
++|++.|. +.++..+.+.|++.. .+++|.++.-++++ ...+. ..++. +.. .++.+.+
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~----~g~~V~~~~r~~~~------------~~~l~-~~~~~---~~~-~D~~d~~~ 59 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKV----PASQIIAIVRNVEK------------ASTLA-DQGVE---VRH-GDYNQPES 59 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTS----CGGGEEEEESCTTT------------THHHH-HTTCE---EEE-CCTTCHHH
T ss_pred CeEEEEcCCchHHHHHHHHHHHhC----CCCeEEEEEcCHHH------------HhHHh-hcCCe---EEE-eccCCHHH
Confidence 47888885 556666777777631 15788776543321 12222 34555 333 2344444
Q ss_pred HHHHHHhcCCcEEEEecC
Q 048078 128 FLSNLRALQPELCITAAY 145 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~~ 145 (378)
+.+.++ ++|.+|.++.
T Consensus 60 l~~~~~--~~d~vi~~a~ 75 (287)
T 2jl1_A 60 LQKAFA--GVSKLLFISG 75 (287)
T ss_dssp HHHHTT--TCSEEEECCC
T ss_pred HHHHHh--cCCEEEEcCC
Confidence 434443 5898887654
No 383
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=23.60 E-value=1.2e+02 Score=28.39 Aligned_cols=77 Identities=10% Similarity=0.072 Sum_probs=43.0
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCc-eEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcH
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIF-EVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGED 126 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~-ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~ 126 (378)
..-+|+++|.+.++..+++.+... +. +|+++-..+.+ .++|+++|... ++.+.+. ++
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a~~~------Ga~~Vi~~~~~~~~-------------~~~a~~lGa~~--vi~~~~~-~~ 250 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGAKTA------GASRIIGIDIDSKK-------------YETAKKFGVNE--FVNPKDH-DK 250 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHH------TCSCEEEECSCTTH-------------HHHHHTTTCCE--EECGGGC-SS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc------CCCeEEEEcCCHHH-------------HHHHHHcCCcE--EEccccC-ch
Confidence 345899999987666666554433 45 45544323221 57899999874 3332210 11
Q ss_pred HHHHHHH---hcCCcEEEEecCC
Q 048078 127 AFLSNLR---ALQPELCITAAYG 146 (378)
Q Consensus 127 ~~~~~l~---~~~~Dliv~~~~~ 146 (378)
++.+.++ .-.+|+++-+.-.
T Consensus 251 ~~~~~i~~~~~gg~D~vid~~g~ 273 (378)
T 3uko_A 251 PIQEVIVDLTDGGVDYSFECIGN 273 (378)
T ss_dssp CHHHHHHHHTTSCBSEEEECSCC
T ss_pred hHHHHHHHhcCCCCCEEEECCCC
Confidence 2233333 2379999876543
No 384
>2wja_A Putative acid phosphatase WZB; hydrolase; 2.50A {Escherichia coli}
Probab=23.58 E-value=3.2e+02 Score=22.79 Aligned_cols=82 Identities=9% Similarity=0.069 Sum_probs=43.6
Q ss_pred ceEEEEecCcchHHHH-HHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHHH
Q 048078 50 KPLVFLGSPQVSVNVL-DALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAF 128 (378)
Q Consensus 50 ~rIvf~Gs~~~a~~~L-~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~~ 128 (378)
+||+|+-+++..-+-+ ++|++... .+++|..-=|.. . .| . .......+.++++||+... ..+..+.+..+
T Consensus 27 ~~VLFVCtgNicRSpmAEal~r~~~---~~~~v~SAGt~~-~-~g--~-~~~p~a~~vl~e~Gid~s~-~~sr~l~~~~~ 97 (168)
T 2wja_A 27 DSILVICTGNICRSPIGERLLRRLL---PSKKINSAGVGA-L-VD--H-AADESAIRVAEKNGLCLKG-HRGTKFTSALA 97 (168)
T ss_dssp SEEEEEESSSSSHHHHHHHHHHHHS---TTSEEEEEETTC-C-TT--C-CCCHHHHHC---CCCCCTT-CCCCBCCHHHH
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHhc---CCeEEEeeecCC-C-CC--C-CCCHHHHHHHHHcCCCccc-CccCCCChhHh
Confidence 4899998888655533 56665432 135554333322 1 11 1 1234567788899999321 23444543321
Q ss_pred HHHHHhcCCcEEEEecCC
Q 048078 129 LSNLRALQPELCITAAYG 146 (378)
Q Consensus 129 ~~~l~~~~~Dliv~~~~~ 146 (378)
..+|+||++.-.
T Consensus 98 ------~~~DlIitM~~~ 109 (168)
T 2wja_A 98 ------RQYDLLLVMEYS 109 (168)
T ss_dssp ------TTCSEEEESSHH
T ss_pred ------ccCCEEEEcCHH
Confidence 379999998753
No 385
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=23.56 E-value=1e+02 Score=30.75 Aligned_cols=83 Identities=10% Similarity=-0.001 Sum_probs=51.4
Q ss_pred CceEEEEecCcchHHHHHHH-HHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 49 KKPLVFLGSPQVSVNVLDAL-FNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L-~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
..||+++|.+..+...-+.| .+. +++++++.|..... ...+++..++.+- .++.. + +..+
T Consensus 303 Gkrv~i~gd~~~~~~l~~~L~~el------Gm~vv~~gt~~~~~--------~~~~~~~l~~~~~--~v~~~-~--D~~e 363 (511)
T 2xdq_B 303 GKKAVVFGDNTHAAAMTKILSREM------GIHVVWAGTYCKYD--------ADWFRAEVAGFCD--EVLIT-D--DHTV 363 (511)
T ss_dssp TCEEEEEECHHHHHHHHHHHHHHH------CCEEEEEEESCGGG--------HHHHHHHHTTTSS--EEEEC-C--CHHH
T ss_pred CCEEEEEcCChHHHHHHHHHHHhC------CCEEEEeecCCCCc--------hHHHHHHHHhcCC--cEEEe-C--CHHH
Confidence 46999999877777777777 454 78888776653221 1123334444332 22222 2 2457
Q ss_pred HHHHHHhcCCcEEEEecCCCcCC
Q 048078 128 FLSNLRALQPELCITAAYGNILP 150 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~~~~ilp 150 (378)
+.+.+++.+||++|.-++.+.+-
T Consensus 364 l~~~i~~~~pDl~ig~~~~r~~a 386 (511)
T 2xdq_B 364 VGDAIARVEPAAIFGTQMERHVG 386 (511)
T ss_dssp HHHHHHHHCCSEEEECHHHHHHH
T ss_pred HHHHHHhcCCCEEEeccchHHHH
Confidence 78889999999999766655443
No 386
>2o2z_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, NAD-binding protein; HET: NAD; 2.60A {Bacillus halodurans} PDB: 2hzb_A
Probab=23.35 E-value=79 Score=29.92 Aligned_cols=38 Identities=24% Similarity=0.246 Sum_probs=28.0
Q ss_pred CCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCC
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPS 90 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~ 90 (378)
.+.+||++||.+.-....|+.|.+. ..++.+|||-.|.
T Consensus 2 ~~~~kiv~lgGGtGl~~ll~gL~~~------~~~iT~IVtv~Dd 39 (323)
T 2o2z_A 2 MKKKNVIVFGGGTGLSVLLRGLKTF------PVSITAIVTVADD 39 (323)
T ss_dssp CCCEEEEEEECSHHHHHHHHHHTTS------SEEEEEEECCCCC
T ss_pred CCCCeEEEECCcccHHHHHHHHHhc------CCCeEEEEECCcC
Confidence 3568999999986445566666442 5789999997775
No 387
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=23.31 E-value=2.4e+02 Score=26.19 Aligned_cols=114 Identities=16% Similarity=0.146 Sum_probs=65.4
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
..++|+++|.+.++..+.+.|... +++|.++-.+++. .+.+.+.|+. .. +.+
T Consensus 154 ~g~~vgIIG~G~iG~~iA~~l~~~------G~~V~~~d~~~~~-------------~~~~~~~g~~---~~-----~l~- 205 (330)
T 2gcg_A 154 TQSTVGIIGLGRIGQAIARRLKPF------GVQRFLYTGRQPR-------------PEEAAEFQAE---FV-----STP- 205 (330)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGG------TCCEEEEESSSCC-------------HHHHHTTTCE---EC-----CHH-
T ss_pred CCCEEEEECcCHHHHHHHHHHHHC------CCEEEEECCCCcc-------------hhHHHhcCce---eC-----CHH-
Confidence 357999999999999988887654 5676543222211 1234455654 21 112
Q ss_pred HHHHHHhcCCcEEEEecC-----CCcCChhhhcCCCCceEEEccCCCCCCCCc----hHHHHHHHcCCcEEEEEEEEecC
Q 048078 128 FLSNLRALQPELCITAAY-----GNILPSKFLNIPPMGTVNIHPSLLPLYRGA----APVQRALQGGAKETGVSLAFTVR 198 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~~-----~~ilp~~il~~~~~g~iNiHpSlLP~yRG~----~pi~wai~~g~~~tGvTih~~~~ 198 (378)
+.++ +.|+++++-- ..++..++++..+.+.+=+.-| ||. ..+..++.+| ...|+.++.+..
T Consensus 206 --e~l~--~aDvVi~~vp~~~~t~~~i~~~~~~~mk~gailIn~s-----rg~~v~~~aL~~aL~~~-~i~ga~lDv~~~ 275 (330)
T 2gcg_A 206 --ELAA--QSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINIS-----RGDVVNQDDLYQALASG-KIAAAGLDVTSP 275 (330)
T ss_dssp --HHHH--HCSEEEECCCCCTTTTTCBSHHHHHHSCTTCEEEECS-----CGGGBCHHHHHHHHHHT-SSSEEEESCCSS
T ss_pred --HHHh--hCCEEEEeCCCChHHHHhhCHHHHhcCCCCcEEEECC-----CCcccCHHHHHHHHHcC-CccEEEeCCCCC
Confidence 2332 5898888752 3566666666655553333333 442 4567777775 344666665544
Q ss_pred C
Q 048078 199 A 199 (378)
Q Consensus 199 ~ 199 (378)
+
T Consensus 276 e 276 (330)
T 2gcg_A 276 E 276 (330)
T ss_dssp S
T ss_pred C
Confidence 3
No 388
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=23.31 E-value=2.8e+02 Score=24.59 Aligned_cols=23 Identities=13% Similarity=0.121 Sum_probs=20.8
Q ss_pred CceEEEEecCcchHHHHHHHHHc
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNA 71 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~ 71 (378)
..||+++|.+..+..+++.|...
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~ 50 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGA 50 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHT
T ss_pred cCcEEEEccCHHHHHHHHHHHHc
Confidence 56999999999999999999886
No 389
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=23.24 E-value=1.7e+02 Score=25.59 Aligned_cols=24 Identities=25% Similarity=0.328 Sum_probs=20.8
Q ss_pred CCceEEEEecCcchHHHHHHHHHc
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNA 71 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~ 71 (378)
.+|||+|+|.+.++......|.++
T Consensus 3 ~~m~i~iiG~G~mG~~~a~~l~~~ 26 (262)
T 2rcy_A 3 ENIKLGFMGLGQMGSALAHGIANA 26 (262)
T ss_dssp SSSCEEEECCSHHHHHHHHHHHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHHC
Confidence 358999999999999988888875
No 390
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=23.23 E-value=2.2e+02 Score=24.63 Aligned_cols=74 Identities=11% Similarity=0.086 Sum_probs=40.4
Q ss_pred CceEEEEecC-cchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcH-
Q 048078 49 KKPLVFLGSP-QVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGED- 126 (378)
Q Consensus 49 ~~rIvf~Gs~-~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~- 126 (378)
.+++++.|.. .++..+.+.|++. +++|+++.-++ ..+.+.+++.|+. ++.. ++.++
T Consensus 5 ~k~vlVTGas~giG~~ia~~l~~~------G~~V~~~~r~~------------~~~~~~~~~~~~~---~~~~-D~~~~~ 62 (245)
T 1uls_A 5 DKAVLITGAAHGIGRATLELFAKE------GARLVACDIEE------------GPLREAAEAVGAH---PVVM-DVADPA 62 (245)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHT------TCEEEEEESCH------------HHHHHHHHTTTCE---EEEC-CTTCHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC------CCEEEEEeCCH------------HHHHHHHHHcCCE---EEEe-cCCCHH
Confidence 3568888854 4666677788775 57766543211 2355666665633 2322 33333
Q ss_pred HHHHHHHh-----cCCcEEEEec
Q 048078 127 AFLSNLRA-----LQPELCITAA 144 (378)
Q Consensus 127 ~~~~~l~~-----~~~Dliv~~~ 144 (378)
++.+.+++ -.+|++|...
T Consensus 63 ~~~~~~~~~~~~~g~id~lvn~A 85 (245)
T 1uls_A 63 SVERGFAEALAHLGRLDGVVHYA 85 (245)
T ss_dssp HHHHHHHHHHHHHSSCCEEEECC
T ss_pred HHHHHHHHHHHHcCCCCEEEECC
Confidence 33333332 2589888765
No 391
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=23.21 E-value=69 Score=31.82 Aligned_cols=30 Identities=13% Similarity=0.142 Sum_probs=23.3
Q ss_pred CCCceEEEEecCcchHHHHHHHHHccCCCCCCceEE
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVA 82 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~ 82 (378)
..++||+|+|.+.++......|.++ +++|.
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~------G~~V~ 42 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESR------GYTVS 42 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTT------TCCEE
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhC------CCeEE
Confidence 3488999999999988888888765 56654
No 392
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=23.20 E-value=2.4e+02 Score=21.20 Aligned_cols=99 Identities=6% Similarity=-0.026 Sum_probs=53.3
Q ss_pred CCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecC--CCCCC
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFT--PERAG 124 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~--~~~~~ 124 (378)
..++||+++..+......|+.+++.. ++++. .+++.. ...+.+++...... +.. ....+
T Consensus 5 ~~~~~iLivdd~~~~~~~l~~~L~~~-----g~~v~-~~~~~~------------~a~~~l~~~~~dli-i~d~~l~~~~ 65 (142)
T 3cg4_A 5 EHKGDVMIVDDDAHVRIAVKTILSDA-----GFHII-SADSGG------------QCIDLLKKGFSGVV-LLDIMMPGMD 65 (142)
T ss_dssp -CCCEEEEECSCHHHHHHHHHHHHHT-----TCEEE-EESSHH------------HHHHHHHTCCCEEE-EEESCCSSSC
T ss_pred CCCCeEEEEcCCHHHHHHHHHHHHHC-----CeEEE-EeCCHH------------HHHHHHHhcCCCEE-EEeCCCCCCC
Confidence 35789999999877777888877752 56643 333221 34555555543322 222 12344
Q ss_pred cHHHHHHHHh--cCCcE--EEEecCCCcCChhhhcCCCCceEEEcc
Q 048078 125 EDAFLSNLRA--LQPEL--CITAAYGNILPSKFLNIPPMGTVNIHP 166 (378)
Q Consensus 125 ~~~~~~~l~~--~~~Dl--iv~~~~~~ilp~~il~~~~~g~iNiHp 166 (378)
.-++++.+++ ..+++ +++.+.. -+.......+.|+..+-.
T Consensus 66 g~~~~~~l~~~~~~~~~pii~~s~~~--~~~~~~~~~~~g~~~~l~ 109 (142)
T 3cg4_A 66 GWDTIRAILDNSLEQGIAIVMLTAKN--APDAKMIGLQEYVVDYIT 109 (142)
T ss_dssp HHHHHHHHHHTTCCTTEEEEEEECTT--CCCCSSTTGGGGEEEEEE
T ss_pred HHHHHHHHHhhcccCCCCEEEEECCC--CHHHHHHHHhcCccEEEe
Confidence 5677888887 55554 4444432 233333344455555433
No 393
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=23.17 E-value=1.3e+02 Score=26.00 Aligned_cols=31 Identities=10% Similarity=0.101 Sum_probs=20.1
Q ss_pred CceEEEEecC-cchHHHHHHHHH-ccCCCCCCceEEEEE
Q 048078 49 KKPLVFLGSP-QVSVNVLDALFN-ASSSPDSIFEVAAIV 85 (378)
Q Consensus 49 ~~rIvf~Gs~-~~a~~~L~~L~~-~~~~~~~~~ei~~Vv 85 (378)
..+|++.|.. .++..+.+.|++ . +++|+++.
T Consensus 4 ~k~vlITGasggIG~~~a~~L~~~~------g~~V~~~~ 36 (276)
T 1wma_A 4 IHVALVTGGNKGIGLAIVRDLCRLF------SGDVVLTA 36 (276)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHHS------SSEEEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHhc------CCeEEEEe
Confidence 4567777754 466667778877 4 56766554
No 394
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=23.03 E-value=99 Score=28.59 Aligned_cols=77 Identities=14% Similarity=0.019 Sum_probs=42.2
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHHH
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAF 128 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~~ 128 (378)
.-+|++.|.+..+..+++.+.... ..+|+++...+. -.++|+++|... ++.......+++
T Consensus 172 g~~vlv~GaG~vG~~a~qla~~~g-----~~~Vi~~~~~~~-------------~~~~~~~lGa~~--~i~~~~~~~~~v 231 (345)
T 3jv7_A 172 GSTAVVIGVGGLGHVGIQILRAVS-----AARVIAVDLDDD-------------RLALAREVGADA--AVKSGAGAADAI 231 (345)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHC-----CCEEEEEESCHH-------------HHHHHHHTTCSE--EEECSTTHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcC-----CCEEEEEcCCHH-------------HHHHHHHcCCCE--EEcCCCcHHHHH
Confidence 457899998766666655443321 356655544332 257889999874 332222111222
Q ss_pred HHHHHhcCCcEEEEecC
Q 048078 129 LSNLRALQPELCITAAY 145 (378)
Q Consensus 129 ~~~l~~~~~Dliv~~~~ 145 (378)
.+......+|+++-+.-
T Consensus 232 ~~~t~g~g~d~v~d~~G 248 (345)
T 3jv7_A 232 RELTGGQGATAVFDFVG 248 (345)
T ss_dssp HHHHGGGCEEEEEESSC
T ss_pred HHHhCCCCCeEEEECCC
Confidence 23333347898886553
No 395
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=23.01 E-value=2.2e+02 Score=27.94 Aligned_cols=165 Identities=12% Similarity=0.021 Sum_probs=89.0
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCC----CCCCCCCccCChHHHHHHHHCCCCCceecCCCCC
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPP----SRRDRGRKVLPSPVAQYALDRGFPADLIFTPERA 123 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~----~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~ 123 (378)
...||++-|.++.+....+.|.+. +..|++|. +.+ .+.| +....+.++.+++|-= . =+....+
T Consensus 220 ~g~~vaVqG~GnVG~~aa~~l~e~------GakVVavs-D~~G~iyd~~G----lD~~~l~~~~~~~g~i-~-~~~a~~~ 286 (424)
T 3k92_A 220 QNARIIIQGFGNAGSFLAKFMHDA------GAKVIGIS-DANGGLYNPDG----LDIPYLLDKRDSFGMV-T-NLFTDVI 286 (424)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHH------TCEEEEEE-CSSCEEECTTC----CCHHHHHHHCCSSSCC-G-GGCSCCB
T ss_pred ccCEEEEECCCHHHHHHHHHHHHC------CCEEEEEE-CCCCcEECCCC----CCHHHHHHHHHHhCCC-C-CCCcEEe
Confidence 357999999999999898888875 57777664 222 1111 2334455555554411 0 0111223
Q ss_pred CcHHHHHHHHhcCCcEEEEecCCCcCChhhhcCCCCceEEEccCCCCCCCCchHHHHHHHcCCcEEEEEEEEecC-CCCC
Q 048078 124 GEDAFLSNLRALQPELCITAAYGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQRALQGGAKETGVSLAFTVR-ALDA 202 (378)
Q Consensus 124 ~~~~~~~~l~~~~~Dliv~~~~~~ilp~~il~~~~~g~iNiHpSlLP~yRG~~pi~wai~~g~~~tGvTih~~~~-~~D~ 202 (378)
..+++ -..++|+++=++....|..+-....+-+ +-.=.+-.|-- |=.-.++.. -|+ .++.+ -.-+
T Consensus 287 ~~~~i----~~~~~DIliPcA~~n~I~~~~a~~l~ak-~V~EgAN~p~t----~eA~~iL~~---rGI--~~~PD~~aNA 352 (424)
T 3k92_A 287 TNEEL----LEKDCDILVPAAISNQITAKNAHNIQAS-IVVERANGPTT----IDATKILNE---RGV--LLVPDILASA 352 (424)
T ss_dssp CHHHH----HHSCCSEEEECSCSSCBCTTTGGGCCCS-EEECCSSSCBC----HHHHHHHHH---TTC--EEECHHHHTT
T ss_pred cCccc----eeccccEEeecCcccccChhhHhhcCce-EEEcCCCCCCC----HHHHHHHHH---CCC--EEECchHhcC
Confidence 33343 3579999999999999988877765443 33444555532 222223221 122 22221 1233
Q ss_pred CCeeEEEEEEe-----CCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 048078 203 GPVIAREKMEV-----DDQIKAPELLVLLFSEGSELLIRELPS 240 (378)
Q Consensus 203 G~Ii~Q~~~~I-----~~~dt~~~L~~kl~~~~~~ll~~~l~~ 240 (378)
|-|+.. .++. ....+.+++.+|+.....+.+.++++.
T Consensus 353 GGV~vS-~~E~~qn~~~~~w~~eeV~~~l~~~m~~~~~~v~~~ 394 (424)
T 3k92_A 353 GGVTVS-YFEWVQNNQGYYWSEEEVAEKLRSVMVSSFETIYQT 394 (424)
T ss_dssp HHHHHH-HHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEee-hhHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 443321 1111 123567777788777666666665544
No 396
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=23.00 E-value=46 Score=33.57 Aligned_cols=118 Identities=16% Similarity=0.167 Sum_probs=67.4
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHHH
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAF 128 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~~ 128 (378)
..||+++|.+.......+.|... .+++++.+.+.... ....+++.+.+.+-.+ +.. + +..++
T Consensus 280 GKrv~i~gd~~~~~~la~~L~~E-----lGm~vv~~gt~~~~--------~~~~~~~~~~~~~~~v--~i~-~--D~~el 341 (525)
T 3aek_B 280 GKRVFIFGDGTHVIAAARIAAKE-----VGFEVVGMGCYNRE--------MARPLRTAAAEYGLEA--LIT-D--DYLEV 341 (525)
T ss_dssp TCEEEECSSHHHHHHHHHHHHHT-----TCCEEEEEEESCGG--------GHHHHHHHHHHTTCCC--EEC-S--CHHHH
T ss_pred CCEEEEEcCchHHHHHHHHHHHH-----cCCeeEEEecCchh--------HHHHHHHHHHhcCCcE--EEe-C--CHHHH
Confidence 35999998776666666666332 37888877664321 1123455566665432 222 2 24567
Q ss_pred HHHHHhcCCcEEEEecCCCcCChhhhcCCC----Cce----EEEccCCCCCCCCchHHHHHHHcC
Q 048078 129 LSNLRALQPELCITAAYGNILPSKFLNIPP----MGT----VNIHPSLLPLYRGAAPVQRALQGG 185 (378)
Q Consensus 129 ~~~l~~~~~Dliv~~~~~~ilp~~il~~~~----~g~----iNiHpSlLP~yRG~~pi~wai~~g 185 (378)
.+.+++.+||++|.-++.+.+-.+ +..|- ..+ +..|...+=-|+|+.-+...|.|-
T Consensus 342 ~~~i~~~~pDL~ig~~~~~~~a~~-~giP~~~i~~Pi~~~~~~~~~~p~~GY~Ga~~l~~~i~n~ 405 (525)
T 3aek_B 342 EKAIEAAAPELILGTQMERNIAKK-LGLPCAVISAPVHVQDFPARYAPQMGFEGANVLFDTWVHP 405 (525)
T ss_dssp HHHHHHHCCSEEEECHHHHHHHHH-HTCCEEECSSSCCGGGSCSSCCCSSHHHHHHHHHHHHHTT
T ss_pred HHHHhhcCCCEEEecchhHHHHHH-cCCCEEEecCcchhhhccccccCCchHHHHHHHHHHHHHH
Confidence 788999999999975554333221 11110 000 112334455688888777777764
No 397
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=22.91 E-value=83 Score=28.73 Aligned_cols=103 Identities=10% Similarity=0.118 Sum_probs=51.6
Q ss_pred CceEEEEe-cCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 49 KKPLVFLG-SPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 49 ~~rIvf~G-s~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
.+||+|+| .+.++......|.+. +++|.++ +++.. ....+.+.+..+= .+.-|... -.+
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~------G~~V~~~--~~~~~---------~~~~~~~~~aDvV--ilavp~~~-~~~ 80 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRAS------GYPISIL--DREDW---------AVAESILANADVV--IVSVPINL-TLE 80 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTT------TCCEEEE--CTTCG---------GGHHHHHTTCSEE--EECSCGGG-HHH
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhC------CCeEEEE--ECCcc---------cCHHHHhcCCCEE--EEeCCHHH-HHH
Confidence 35899999 999998888888764 4665433 33221 1233444333332 12222222 334
Q ss_pred HHHHHHh-cCCcEEEE-ecCCCc-CChhhhcCCCCceEEEccCCCCC
Q 048078 128 FLSNLRA-LQPELCIT-AAYGNI-LPSKFLNIPPMGTVNIHPSLLPL 171 (378)
Q Consensus 128 ~~~~l~~-~~~Dliv~-~~~~~i-lp~~il~~~~~g~iNiHpSlLP~ 171 (378)
+++.+.. ..++.+|+ ++-... +-+.+....+..++..||-.-|.
T Consensus 81 vl~~l~~~l~~~~iv~~~~svk~~~~~~~~~~~~~~~v~~hP~~g~~ 127 (298)
T 2pv7_A 81 TIERLKPYLTENMLLADLTSVKREPLAKMLEVHTGAVLGLHPMFGAD 127 (298)
T ss_dssp HHHHHGGGCCTTSEEEECCSCCHHHHHHHHHHCSSEEEEEEECSCTT
T ss_pred HHHHHHhhcCCCcEEEECCCCCcHHHHHHHHhcCCCEEeeCCCCCCC
Confidence 4454543 45554444 222111 12223333334578889855454
No 398
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=22.79 E-value=3.5e+02 Score=24.14 Aligned_cols=78 Identities=15% Similarity=0.114 Sum_probs=42.1
Q ss_pred CceEEEEecC---cchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCc
Q 048078 49 KKPLVFLGSP---QVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGE 125 (378)
Q Consensus 49 ~~rIvf~Gs~---~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~ 125 (378)
..++++.|.. .++..+.+.|.+. +++|+.+.-+ ... ...+.+.+++.+-- . .+. -++.+
T Consensus 30 ~k~vlVTGasg~~GIG~~ia~~la~~------G~~V~~~~r~-~~~--------~~~~~~~~~~~~~~-~-~~~-~Dv~d 91 (296)
T 3k31_A 30 GKKGVIIGVANDKSLAWGIAKAVCAQ------GAEVALTYLS-ETF--------KKRVDPLAESLGVK-L-TVP-CDVSD 91 (296)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHT------TCEEEEEESS-GGG--------HHHHHHHHHHHTCC-E-EEE-CCTTC
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHC------CCEEEEEeCC-hHH--------HHHHHHHHHhcCCe-E-EEE-cCCCC
Confidence 4578888864 5777788888875 5776544322 110 12345555555532 1 222 23444
Q ss_pred H-HHHHHHHhc-----CCcEEEEec
Q 048078 126 D-AFLSNLRAL-----QPELCITAA 144 (378)
Q Consensus 126 ~-~~~~~l~~~-----~~Dliv~~~ 144 (378)
+ ++.+.+++. .+|++|..+
T Consensus 92 ~~~v~~~~~~~~~~~g~iD~lVnnA 116 (296)
T 3k31_A 92 AESVDNMFKVLAEEWGSLDFVVHAV 116 (296)
T ss_dssp HHHHHHHHHHHHHHHSCCSEEEECC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECC
Confidence 3 333333332 799988765
No 399
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=22.74 E-value=2.5e+02 Score=23.90 Aligned_cols=74 Identities=15% Similarity=0.171 Sum_probs=40.5
Q ss_pred CceEEEEecC-cchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHC-CCCCceecCCCCCCcH
Q 048078 49 KKPLVFLGSP-QVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDR-GFPADLIFTPERAGED 126 (378)
Q Consensus 49 ~~rIvf~Gs~-~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~-gIp~~~v~~~~~~~~~ 126 (378)
..+|++.|.. .++..+.+.|++. +++|+++.-++ ..+.+.+++. ++. ++. -++.+.
T Consensus 7 ~k~vlITGasggiG~~~a~~l~~~------G~~V~~~~r~~------------~~~~~~~~~~~~~~---~~~-~D~~~~ 64 (244)
T 3d3w_A 7 GRRVLVTGAGKGIGRGTVQALHAT------GARVVAVSRTQ------------ADLDSLVRECPGIE---PVC-VDLGDW 64 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHT------TCEEEEEESCH------------HHHHHHHHHSTTCE---EEE-CCTTCH
T ss_pred CcEEEEECCCcHHHHHHHHHHHHC------CCEEEEEeCCH------------HHHHHHHHHcCCCC---EEE-EeCCCH
Confidence 3578888864 4666677778774 57765543221 1244444443 443 332 234444
Q ss_pred -HHHHHHHhc-CCcEEEEec
Q 048078 127 -AFLSNLRAL-QPELCITAA 144 (378)
Q Consensus 127 -~~~~~l~~~-~~Dliv~~~ 144 (378)
++.+.++.+ .+|++|..+
T Consensus 65 ~~~~~~~~~~~~id~vi~~A 84 (244)
T 3d3w_A 65 EATERALGSVGPVDLLVNNA 84 (244)
T ss_dssp HHHHHHHTTCCCCCEEEECC
T ss_pred HHHHHHHHHcCCCCEEEECC
Confidence 444445443 579888665
No 400
>3u9t_A MCC alpha, methylcrotonyl-COA carboxylase, alpha-subunit; biotin carboxylase, carboxyltransferase, BT domain, BCCP DOM ligase; 2.90A {Pseudomonas aeruginosa} PDB: 3u9s_A
Probab=22.66 E-value=58 Score=33.95 Aligned_cols=36 Identities=8% Similarity=0.061 Sum_probs=29.8
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCC
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPS 90 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~ 90 (378)
..||+++|.++.+..+++++.+. ++++++|.+.++.
T Consensus 28 ~~kILI~g~Geia~~iiraar~l------Gi~~vav~s~~d~ 63 (675)
T 3u9t_A 28 IQRLLVANRGEIACRVMRSARAL------GIGSVAVHSDIDR 63 (675)
T ss_dssp CSEEEECCCHHHHHHHHHHHHHH------TCEEEEEECSGGG
T ss_pred CCEEEEECCCHHHHHHHHHHHHC------CCEEEEEECCCCC
Confidence 46999999999999999988775 7999888776553
No 401
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=22.61 E-value=2.5e+02 Score=27.00 Aligned_cols=110 Identities=13% Similarity=0.096 Sum_probs=68.8
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
..++|+|+|.+.++..+.+.|... +++|.+ .++... -.+.+.+.|+. ... +
T Consensus 190 ~gktvGIIGlG~IG~~vA~~l~a~------G~~V~~--~d~~~~-----------~~~~~~~~G~~---~~~--~----- 240 (393)
T 2nac_A 190 EAMHVGTVAAGRIGLAVLRRLAPF------DVHLHY--TDRHRL-----------PESVEKELNLT---WHA--T----- 240 (393)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGG------TCEEEE--ECSSCC-----------CHHHHHHHTCE---ECS--S-----
T ss_pred CCCEEEEEeECHHHHHHHHHHHhC------CCEEEE--EcCCcc-----------chhhHhhcCce---ecC--C-----
Confidence 356899999999999988887653 566542 333211 02456667765 211 1
Q ss_pred HHHHHHhcCCcEEEEecC-----CCcCChhhhcCCCCceEEEccCCCCCCCCc----hHHHHHHHcCCcEEEEEEE
Q 048078 128 FLSNLRALQPELCITAAY-----GNILPSKFLNIPPMGTVNIHPSLLPLYRGA----APVQRALQGGAKETGVSLA 194 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~~-----~~ilp~~il~~~~~g~iNiHpSlLP~yRG~----~pi~wai~~g~~~tGvTih 194 (378)
+.+.+ .+.|++++.-- ..+|..+.++..+.+.+=+.-| ||. ..+..|+.+|. -.|.-+-
T Consensus 241 l~ell--~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~a-----RG~~vde~aL~~aL~~g~-i~gA~lD 308 (393)
T 2nac_A 241 REDMY--PVCDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTA-----RGKLCDRDAVARALESGR-LAGYAGD 308 (393)
T ss_dssp HHHHG--GGCSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECS-----CGGGBCHHHHHHHHHTTS-EEEEEES
T ss_pred HHHHH--hcCCEEEEecCCchHHHHHhhHHHHhhCCCCCEEEECC-----CchHhhHHHHHHHHHcCC-eeEEEEE
Confidence 12333 36899988742 4677788888877775555555 674 46778888874 4554433
No 402
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=22.53 E-value=1.8e+02 Score=25.36 Aligned_cols=30 Identities=13% Similarity=0.079 Sum_probs=19.7
Q ss_pred CceEEEEecC-cchHHHHHHHHHccCCCCCCceEEEE
Q 048078 49 KKPLVFLGSP-QVSVNVLDALFNASSSPDSIFEVAAI 84 (378)
Q Consensus 49 ~~rIvf~Gs~-~~a~~~L~~L~~~~~~~~~~~ei~~V 84 (378)
..+|++.|.. .++..+.+.|++. +++|+++
T Consensus 14 ~k~vlVTGas~gIG~~ia~~l~~~------G~~V~~~ 44 (260)
T 2zat_A 14 NKVALVTASTDGIGLAIARRLAQD------GAHVVVS 44 (260)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHT------TCEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC------CCEEEEE
Confidence 4567777754 4666677788775 5776554
No 403
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=22.51 E-value=74 Score=29.34 Aligned_cols=77 Identities=8% Similarity=0.021 Sum_probs=42.5
Q ss_pred CCceEEEEe-cCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCc-
Q 048078 48 RKKPLVFLG-SPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGE- 125 (378)
Q Consensus 48 ~~~rIvf~G-s~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~- 125 (378)
..-+|++.| ++.++..+.+.+... +.+|+++..++. -.+++++.|... ++...+.+.
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~~------Ga~Vi~~~~~~~-------------~~~~~~~~ga~~--~~~~~~~~~~ 206 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKMK------GAHTIAVASTDE-------------KLKIAKEYGAEY--LINASKEDIL 206 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHT------TCEEEEEESSHH-------------HHHHHHHTTCSE--EEETTTSCHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC------CCEEEEEeCCHH-------------HHHHHHHcCCcE--EEeCCCchHH
Confidence 345899999 776766666655443 577766554322 246888888663 333322221
Q ss_pred HHHHHHHHhcCCcEEEEecC
Q 048078 126 DAFLSNLRALQPELCITAAY 145 (378)
Q Consensus 126 ~~~~~~l~~~~~Dliv~~~~ 145 (378)
+.+.+......+|+++-+.-
T Consensus 207 ~~~~~~~~~~g~D~vid~~g 226 (334)
T 3qwb_A 207 RQVLKFTNGKGVDASFDSVG 226 (334)
T ss_dssp HHHHHHTTTSCEEEEEECCG
T ss_pred HHHHHHhCCCCceEEEECCC
Confidence 22222222346888886553
No 404
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=22.49 E-value=1.4e+02 Score=26.61 Aligned_cols=80 Identities=15% Similarity=0.122 Sum_probs=41.1
Q ss_pred CceEEEEecCc-chHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcH-
Q 048078 49 KKPLVFLGSPQ-VSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGED- 126 (378)
Q Consensus 49 ~~rIvf~Gs~~-~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~- 126 (378)
..++++.|... ++..+.+.|.+. +++|+.+....... ...+.+..++.|-... .+. -++.++
T Consensus 31 gk~~lVTGas~GIG~aia~~la~~------G~~V~~~~~~~~~~--------~~~~~~~l~~~~~~~~-~~~-~Dv~d~~ 94 (271)
T 3v2g_A 31 GKTAFVTGGSRGIGAAIAKRLALE------GAAVALTYVNAAER--------AQAVVSEIEQAGGRAV-AIR-ADNRDAE 94 (271)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESSCHHH--------HHHHHHHHHHTTCCEE-EEE-CCTTCHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC------CCEEEEEeCCCHHH--------HHHHHHHHHhcCCcEE-EEE-CCCCCHH
Confidence 45788888544 666777888875 57765543322110 0123333444565533 222 233333
Q ss_pred HHHHHHHhc-----CCcEEEEec
Q 048078 127 AFLSNLRAL-----QPELCITAA 144 (378)
Q Consensus 127 ~~~~~l~~~-----~~Dliv~~~ 144 (378)
++.+.+++. .+|++|..+
T Consensus 95 ~v~~~~~~~~~~~g~iD~lvnnA 117 (271)
T 3v2g_A 95 AIEQAIRETVEALGGLDILVNSA 117 (271)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHHHcCCCcEEEECC
Confidence 333333322 789988765
No 405
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=22.49 E-value=75 Score=28.23 Aligned_cols=29 Identities=24% Similarity=0.186 Sum_probs=23.3
Q ss_pred ceEEEEecCcchHHHHHHHHHccCCCCCCceEEEE
Q 048078 50 KPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAI 84 (378)
Q Consensus 50 ~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~V 84 (378)
|||+|+|.+.++......|.+. +++|.++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~------g~~V~~~ 29 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQ------GHEVQGW 29 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEE
T ss_pred CeEEEECcCHHHHHHHHHHHhC------CCCEEEE
Confidence 6899999999988888888775 5676554
No 406
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=22.48 E-value=1.9e+02 Score=28.54 Aligned_cols=95 Identities=16% Similarity=0.077 Sum_probs=63.3
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHHH
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAF 128 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~~ 128 (378)
-.+|+++|.+..+..+.+.|... +.+|+ +++++. .-...|...|.. +. + +
T Consensus 211 GktVgIiG~G~IG~~vA~~Lka~------Ga~Vi--v~D~~p-----------~~a~~A~~~G~~---~~-----s---L 260 (436)
T 3h9u_A 211 GKTACVCGYGDVGKGCAAALRGF------GARVV--VTEVDP-----------INALQAAMEGYQ---VL-----L---V 260 (436)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT------TCEEE--EECSCH-----------HHHHHHHHTTCE---EC-----C---H
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC------CCEEE--EECCCh-----------hhhHHHHHhCCe---ec-----C---H
Confidence 56999999999988888887664 56643 355432 112346667765 32 1 2
Q ss_pred HHHHHhcCCcEEEEec-CCCcCChhhhcCCCCceEEEccCCCCCCCCchHHHH
Q 048078 129 LSNLRALQPELCITAA-YGNILPSKFLNIPPMGTVNIHPSLLPLYRGAAPVQR 180 (378)
Q Consensus 129 ~~~l~~~~~Dliv~~~-~~~ilp~~il~~~~~g~iNiHpSlLP~yRG~~pi~w 180 (378)
.+.+ .+.|++++.. -..+|..+.++..+.+.+=++.| ||...+.-
T Consensus 261 ~eal--~~ADVVilt~gt~~iI~~e~l~~MK~gAIVINvg-----Rg~vEID~ 306 (436)
T 3h9u_A 261 EDVV--EEAHIFVTTTGNDDIITSEHFPRMRDDAIVCNIG-----HFDTEIQV 306 (436)
T ss_dssp HHHT--TTCSEEEECSSCSCSBCTTTGGGCCTTEEEEECS-----SSGGGBCH
T ss_pred HHHH--hhCCEEEECCCCcCccCHHHHhhcCCCcEEEEeC-----CCCCccCH
Confidence 2333 3689998755 34789999999999898888888 66543433
No 407
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=22.47 E-value=1e+02 Score=29.31 Aligned_cols=76 Identities=11% Similarity=-0.022 Sum_probs=41.9
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCc-eEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCc-H
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIF-EVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGE-D 126 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~-ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~-~ 126 (378)
--+|+++|.+.++..+++.+... +. +|+++...++ -.++|+++|.. ++...+.+. .
T Consensus 186 g~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi~~~~~~~-------------~~~~a~~lGa~---~i~~~~~~~~~ 243 (398)
T 2dph_A 186 GSHVYIAGAGPVGRCAAAGARLL------GAACVIVGDQNPE-------------RLKLLSDAGFE---TIDLRNSAPLR 243 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH------TCSEEEEEESCHH-------------HHHHHHTTTCE---EEETTSSSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHc------CCCEEEEEcCCHH-------------HHHHHHHcCCc---EEcCCCcchHH
Confidence 35899999876666565544332 45 6665544332 25788899984 333322221 2
Q ss_pred HHHHHHH-hcCCcEEEEecCC
Q 048078 127 AFLSNLR-ALQPELCITAAYG 146 (378)
Q Consensus 127 ~~~~~l~-~~~~Dliv~~~~~ 146 (378)
+.+..+. ...+|++|-+.-.
T Consensus 244 ~~~~~~~~g~g~Dvvid~~g~ 264 (398)
T 2dph_A 244 DQIDQILGKPEVDCGVDAVGF 264 (398)
T ss_dssp HHHHHHHSSSCEEEEEECSCT
T ss_pred HHHHHHhCCCCCCEEEECCCC
Confidence 2222222 2368998876643
No 408
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=22.20 E-value=3.6e+02 Score=24.11 Aligned_cols=24 Identities=13% Similarity=0.248 Sum_probs=18.0
Q ss_pred CCceEEEEe-cCcchHHHHHHHHHc
Q 048078 48 RKKPLVFLG-SPQVSVNVLDALFNA 71 (378)
Q Consensus 48 ~~~rIvf~G-s~~~a~~~L~~L~~~ 71 (378)
..|+|++.| ++-++..+.+.|++.
T Consensus 13 ~~~~vlVtGa~G~iG~~l~~~L~~~ 37 (342)
T 2hrz_A 13 QGMHIAIIGAAGMVGRKLTQRLVKD 37 (342)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHHH
T ss_pred cCCEEEEECCCcHHHHHHHHHHHhc
Confidence 457999999 555666777888875
No 409
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=22.20 E-value=1.9e+02 Score=28.73 Aligned_cols=89 Identities=16% Similarity=0.063 Sum_probs=58.8
Q ss_pred CCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcH
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGED 126 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~ 126 (378)
-...+|+++|.+..+..+.+.|... +.+|. +++++. .-...+...|+. +. +
T Consensus 255 l~GktVgIIG~G~IG~~vA~~l~~~------G~~Vi--v~d~~~-----------~~~~~a~~~g~~---~~-----~-- 305 (479)
T 1v8b_A 255 ISGKIVVICGYGDVGKGCASSMKGL------GARVY--ITEIDP-----------ICAIQAVMEGFN---VV-----T-- 305 (479)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHH------TCEEE--EECSCH-----------HHHHHHHTTTCE---EC-----C--
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhC------cCEEE--EEeCCh-----------hhHHHHHHcCCE---ec-----C--
Confidence 3467899999999988888888764 56643 344431 011235556664 31 1
Q ss_pred HHHHHHHhcCCcEEEEe-cCCCcCChhhhcCCCCceEEEccC
Q 048078 127 AFLSNLRALQPELCITA-AYGNILPSKFLNIPPMGTVNIHPS 167 (378)
Q Consensus 127 ~~~~~l~~~~~Dliv~~-~~~~ilp~~il~~~~~g~iNiHpS 167 (378)
+.+.+ .+.|+++++ +-..+|..+.++..+.|.+=++.|
T Consensus 306 -l~ell--~~aDiVi~~~~t~~lI~~~~l~~MK~gailiNvg 344 (479)
T 1v8b_A 306 -LDEIV--DKGDFFITCTGNVDVIKLEHLLKMKNNAVVGNIG 344 (479)
T ss_dssp -HHHHT--TTCSEEEECCSSSSSBCHHHHTTCCTTCEEEECS
T ss_pred -HHHHH--hcCCEEEECCChhhhcCHHHHhhcCCCcEEEEeC
Confidence 22333 369999988 566888989999888887777766
No 410
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=22.09 E-value=2.1e+02 Score=26.82 Aligned_cols=111 Identities=16% Similarity=0.159 Sum_probs=67.9
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
..++|+|+|.+.++..+.+.|... +++|.+ .++... .+.+.+.|+. .. +
T Consensus 164 ~g~tvgIIGlG~IG~~vA~~l~~~------G~~V~~--~d~~~~------------~~~~~~~g~~---~~-----~--- 212 (335)
T 2g76_A 164 NGKTLGILGLGRIGREVATRMQSF------GMKTIG--YDPIIS------------PEVSASFGVQ---QL-----P--- 212 (335)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTT------TCEEEE--ECSSSC------------HHHHHHTTCE---EC-----C---
T ss_pred CcCEEEEEeECHHHHHHHHHHHHC------CCEEEE--ECCCcc------------hhhhhhcCce---eC-----C---
Confidence 356899999999999988887643 577643 233211 1356677775 21 1
Q ss_pred HHHHHHhcCCcEEEEec-----CCCcCChhhhcCCCCceEEEccCCCCCCCCc----hHHHHHHHcCCcEEEEEEEEec
Q 048078 128 FLSNLRALQPELCITAA-----YGNILPSKFLNIPPMGTVNIHPSLLPLYRGA----APVQRALQGGAKETGVSLAFTV 197 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~-----~~~ilp~~il~~~~~g~iNiHpSlLP~yRG~----~pi~wai~~g~~~tGvTih~~~ 197 (378)
+.+.+ .+.|+++++- ...+|.+++++..+.+.+=+--| ||. ..+..|+.+|. -.|.-+-...
T Consensus 213 l~ell--~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~a-----rg~vvd~~aL~~aL~~g~-i~gA~lDV~~ 283 (335)
T 2g76_A 213 LEEIW--PLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCA-----RGGIVDEGALLRALQSGQ-CAGAALDVFT 283 (335)
T ss_dssp HHHHG--GGCSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECS-----CTTSBCHHHHHHHHHHTS-EEEEEESCCS
T ss_pred HHHHH--hcCCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECC-----CccccCHHHHHHHHHhCC-ccEEEEeecC
Confidence 12333 2689998873 44677778888777664433333 353 46777888774 5555444433
No 411
>4gnr_A ABC transporter substrate-binding protein-branche amino acid transport; amino acid-binding protein, surface-exposed protein; HET: MLY; 1.00A {Streptococcus pneumoniae}
Probab=22.05 E-value=1.2e+02 Score=27.47 Aligned_cols=45 Identities=11% Similarity=0.085 Sum_probs=29.3
Q ss_pred HHHHHHHCCCCCce--ecCCCCCCcHHHHHHHHhcCCcEEEEecCCC
Q 048078 103 VAQYALDRGFPADL--IFTPERAGEDAFLSNLRALQPELCITAAYGN 147 (378)
Q Consensus 103 v~~~A~~~gIp~~~--v~~~~~~~~~~~~~~l~~~~~Dliv~~~~~~ 147 (378)
...+.+++|..+.. .+.+...+-...+..+++.++|++++.++..
T Consensus 161 ~~~~~~~~g~~vv~~~~~~~~~~d~~~~l~~i~~~~~d~v~~~~~~~ 207 (353)
T 4gnr_A 161 AKSFRESYKGEIVADETFVAGDTDFQAALTKMKGKDFDAIVVPGYYN 207 (353)
T ss_dssp HHHHHHHCCSEEEEEEEECTTCCCCHHHHHHHHTSCCSEEECCSCHH
T ss_pred HHHHHHHcCCEEEEEEeeCCCCCCHHHHHHHHHhcCCCEEEEecCcH
Confidence 45667778876321 1233333345667888999999999888753
No 412
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=22.01 E-value=2.3e+02 Score=24.17 Aligned_cols=30 Identities=17% Similarity=0.061 Sum_probs=20.0
Q ss_pred CceEEEEecCc-chHHHHHHHHHccCCCCCCceEEEE
Q 048078 49 KKPLVFLGSPQ-VSVNVLDALFNASSSPDSIFEVAAI 84 (378)
Q Consensus 49 ~~rIvf~Gs~~-~a~~~L~~L~~~~~~~~~~~ei~~V 84 (378)
.++|++.|... ++..+.+.|++. +++|+++
T Consensus 5 ~~~vlItGasggiG~~~a~~l~~~------G~~V~~~ 35 (247)
T 2hq1_A 5 GKTAIVTGSSRGLGKAIAWKLGNM------GANIVLN 35 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHT------TCEEEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHHC------CCEEEEE
Confidence 35788888544 566677778775 5776655
No 413
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=21.93 E-value=1.6e+02 Score=26.41 Aligned_cols=65 Identities=9% Similarity=0.134 Sum_probs=41.5
Q ss_pred HHHHHHHHCCCCC-ceecCCCCCCcHHHHHHHHhcCCcEEEEecCCCcC---------ChhhhcCCCCceEEEccC
Q 048078 102 PVAQYALDRGFPA-DLIFTPERAGEDAFLSNLRALQPELCITAAYGNIL---------PSKFLNIPPMGTVNIHPS 167 (378)
Q Consensus 102 ~v~~~A~~~gIp~-~~v~~~~~~~~~~~~~~l~~~~~Dliv~~~~~~il---------p~~il~~~~~g~iNiHpS 167 (378)
.+.++++++|++. .......+ -.+.+++..++.++|++|+..+++-- ...++...+..++-++|.
T Consensus 232 ~l~~~~~~~~~~~~~~~v~~g~-~~~~I~~~a~~~~~dLiV~G~~g~~~~~~~~~Gsv~~~vl~~~~~pVLvv~~~ 306 (319)
T 3olq_A 232 AMKELRQKFSIPEEKTHVKEGL-PEQVIPQVCEELNAGIVVLGILGRTGLSAAFLGNTAEQLIDHIKCDLLAIKPD 306 (319)
T ss_dssp HHHHHHHHTTCCGGGEEEEESC-HHHHHHHHHHHTTEEEEEEECCSCCSTHHHHHHHHHHHHHTTCCSEEEEECCT
T ss_pred HHHHHHHHhCCCcccEEEecCC-cHHHHHHHHHHhCCCEEEEeccCccCCccccccHHHHHHHhhCCCCEEEECCC
Confidence 4567778899862 21222222 24677788888999999999876532 235556666666666653
No 414
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=21.87 E-value=72 Score=29.13 Aligned_cols=29 Identities=7% Similarity=0.017 Sum_probs=23.8
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEE
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVA 82 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~ 82 (378)
+++||+|+|.+.++......|.+. +++|.
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~------G~~V~ 34 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRA------GLSTW 34 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT------TCEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC------CCeEE
Confidence 468999999999999998988875 57664
No 415
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=21.73 E-value=82 Score=31.10 Aligned_cols=23 Identities=9% Similarity=0.052 Sum_probs=20.1
Q ss_pred CceEEEEecCcchHHHHHHHHHc
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNA 71 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~ 71 (378)
++||+|+|.+.++......|.+.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~ 27 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESR 27 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHT
T ss_pred CCcEEEEeeHHHHHHHHHHHHhC
Confidence 57999999999988888888875
No 416
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=21.69 E-value=71 Score=28.49 Aligned_cols=28 Identities=7% Similarity=0.006 Sum_probs=22.7
Q ss_pred ceEEEEecCcchHHHHHHHHHccCCCCCCceEEE
Q 048078 50 KPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAA 83 (378)
Q Consensus 50 ~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~ 83 (378)
|||+|+|.+.++......|.+. +++|.+
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~------g~~V~~ 28 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRR------GHYLIG 28 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEE
T ss_pred CEEEEEcCcHHHHHHHHHHHHC------CCEEEE
Confidence 6899999999999888888875 466543
No 417
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=21.68 E-value=1.7e+02 Score=26.78 Aligned_cols=72 Identities=13% Similarity=-0.017 Sum_probs=40.5
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHHH
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDAF 128 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~~ 128 (378)
.-+|++.|.+.++..+++.+... +.+|+++...+. -.++|+++|... ++...+.+ +
T Consensus 167 g~~VlV~GaG~vG~~a~qla~~~------Ga~Vi~~~~~~~-------------~~~~~~~lGa~~--~i~~~~~~---~ 222 (340)
T 3s2e_A 167 GQWVVISGIGGLGHVAVQYARAM------GLRVAAVDIDDA-------------KLNLARRLGAEV--AVNARDTD---P 222 (340)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHT------TCEEEEEESCHH-------------HHHHHHHTTCSE--EEETTTSC---H
T ss_pred CCEEEEECCCHHHHHHHHHHHHC------CCeEEEEeCCHH-------------HHHHHHHcCCCE--EEeCCCcC---H
Confidence 45788899887766666654432 567665544332 256888888763 33332222 2
Q ss_pred HHHHHh--cCCcEEEEec
Q 048078 129 LSNLRA--LQPELCITAA 144 (378)
Q Consensus 129 ~~~l~~--~~~Dliv~~~ 144 (378)
.+.+++ -.+|+++...
T Consensus 223 ~~~~~~~~g~~d~vid~~ 240 (340)
T 3s2e_A 223 AAWLQKEIGGAHGVLVTA 240 (340)
T ss_dssp HHHHHHHHSSEEEEEESS
T ss_pred HHHHHHhCCCCCEEEEeC
Confidence 222322 2678777653
No 418
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=21.63 E-value=1.3e+02 Score=27.83 Aligned_cols=76 Identities=9% Similarity=0.052 Sum_probs=41.6
Q ss_pred CceEEEEecC-cchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCC-cH
Q 048078 49 KKPLVFLGSP-QVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAG-ED 126 (378)
Q Consensus 49 ~~rIvf~Gs~-~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~-~~ 126 (378)
.-+|++.|.+ .++..+.+.+... +.+|+++..++.+ .+++++.|... ++...+.+ .+
T Consensus 145 g~~VlV~Ga~g~iG~~~~~~a~~~------Ga~Vi~~~~~~~~-------------~~~~~~lga~~--~~~~~~~~~~~ 203 (340)
T 3gms_A 145 NDVLLVNACGSAIGHLFAQLSQIL------NFRLIAVTRNNKH-------------TEELLRLGAAY--VIDTSTAPLYE 203 (340)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHH------TCEEEEEESSSTT-------------HHHHHHHTCSE--EEETTTSCHHH
T ss_pred CCEEEEeCCccHHHHHHHHHHHHc------CCEEEEEeCCHHH-------------HHHHHhCCCcE--EEeCCcccHHH
Confidence 4588888876 4555555544433 5777666544332 46777888763 33332222 12
Q ss_pred HHHHHHHhcCCcEEEEecC
Q 048078 127 AFLSNLRALQPELCITAAY 145 (378)
Q Consensus 127 ~~~~~l~~~~~Dliv~~~~ 145 (378)
.+.+......+|++|-+.-
T Consensus 204 ~~~~~~~~~g~Dvvid~~g 222 (340)
T 3gms_A 204 TVMELTNGIGADAAIDSIG 222 (340)
T ss_dssp HHHHHTTTSCEEEEEESSC
T ss_pred HHHHHhCCCCCcEEEECCC
Confidence 2222222347898886553
No 419
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=21.62 E-value=64 Score=27.39 Aligned_cols=29 Identities=14% Similarity=0.100 Sum_probs=23.0
Q ss_pred ceEEEEe-cCcchHHHHHHHHHccCCCCCCceEEEE
Q 048078 50 KPLVFLG-SPQVSVNVLDALFNASSSPDSIFEVAAI 84 (378)
Q Consensus 50 ~rIvf~G-s~~~a~~~L~~L~~~~~~~~~~~ei~~V 84 (378)
|||+++| ++.++....+.|.+. +++|..+
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~------g~~V~~~ 30 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATL------GHEIVVG 30 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT------TCEEEEE
T ss_pred CeEEEEcCCCHHHHHHHHHHHHC------CCEEEEE
Confidence 6899999 999888888888764 5676543
No 420
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=21.61 E-value=73 Score=29.76 Aligned_cols=34 Identities=6% Similarity=-0.022 Sum_probs=23.2
Q ss_pred CCCceEEEEe-cCcchHHHHHHHHHccCCCCCCceEEEE
Q 048078 47 SRKKPLVFLG-SPQVSVNVLDALFNASSSPDSIFEVAAI 84 (378)
Q Consensus 47 ~~~~rIvf~G-s~~~a~~~L~~L~~~~~~~~~~~ei~~V 84 (378)
+++|||+++| ++..+......|++.. ...+|+++
T Consensus 6 ~~~mKI~ViGAaG~VG~~la~~L~~~g----~~~ev~l~ 40 (326)
T 1smk_A 6 APGFKVAILGAAGGIGQPLAMLMKMNP----LVSVLHLY 40 (326)
T ss_dssp --CEEEEEETTTSTTHHHHHHHHHHCT----TEEEEEEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHhCC----CCCEEEEE
Confidence 3479999999 8988888877776631 12566664
No 421
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=21.57 E-value=1e+02 Score=23.44 Aligned_cols=76 Identities=9% Similarity=-0.024 Sum_probs=43.1
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecC--CCCCCc
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFT--PERAGE 125 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~--~~~~~~ 125 (378)
.++||+++..+......|+.+++.. .+++. .+.+.. .+.+..++...... +.. ....+.
T Consensus 6 ~~~~ilivdd~~~~~~~l~~~L~~~-----~~~v~-~~~~~~------------~a~~~l~~~~~dlv-i~d~~l~~~~g 66 (137)
T 3hdg_A 6 VALKILIVEDDTDAREWLSTIISNH-----FPEVW-SAGDGE------------EGERLFGLHAPDVI-ITDIRMPKLGG 66 (137)
T ss_dssp -CCCEEEECSCHHHHHHHHHHHHTT-----CSCEE-EESSHH------------HHHHHHHHHCCSEE-EECSSCSSSCH
T ss_pred cccEEEEEeCCHHHHHHHHHHHHhc-----CcEEE-EECCHH------------HHHHHHhccCCCEE-EEeCCCCCCCH
Confidence 4789999999887777888887752 34432 333221 23445555544422 222 123445
Q ss_pred HHHHHHHHhcCCcEEEE
Q 048078 126 DAFLSNLRALQPELCIT 142 (378)
Q Consensus 126 ~~~~~~l~~~~~Dliv~ 142 (378)
-++++.|++..+++-|+
T Consensus 67 ~~~~~~l~~~~~~~~ii 83 (137)
T 3hdg_A 67 LEMLDRIKAGGAKPYVI 83 (137)
T ss_dssp HHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHhcCCCCcEE
Confidence 67778888776665433
No 422
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=21.56 E-value=2.3e+02 Score=21.89 Aligned_cols=31 Identities=13% Similarity=0.169 Sum_probs=22.4
Q ss_pred CCCceEEEEecCcchHHHHHHHHHccCCCCCCceEE
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVA 82 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~ 82 (378)
.+++||+++..+......|+.+++. .++++.
T Consensus 5 ~~~~~iLivdd~~~~~~~l~~~L~~-----~g~~v~ 35 (154)
T 2rjn_A 5 YKNYTVMLVDDEQPILNSLKRLIKR-----LGCNII 35 (154)
T ss_dssp CSCCEEEEECSCHHHHHHHHHHHHT-----TTCEEE
T ss_pred CCCCeEEEEcCCHHHHHHHHHHHHH-----cCCeEE
Confidence 3478999998887777777777764 256654
No 423
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=21.55 E-value=88 Score=30.97 Aligned_cols=34 Identities=18% Similarity=0.144 Sum_probs=25.9
Q ss_pred CceEEEEe-cCcchHHHHHHHHHccCCCCCCceEEEEEcCC
Q 048078 49 KKPLVFLG-SPQVSVNVLDALFNASSSPDSIFEVAAIVTQP 88 (378)
Q Consensus 49 ~~rIvf~G-s~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~ 88 (378)
+|||++.| ++.++..+++.|++. +++|.++.-.+
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~------G~~V~~l~R~~ 181 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTG------GHEVIQLVRKE 181 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT------TCEEEEEESSS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC------CCEEEEEECCC
Confidence 78999999 566777777888875 68887776443
No 424
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=21.55 E-value=76 Score=28.02 Aligned_cols=32 Identities=22% Similarity=0.190 Sum_probs=24.4
Q ss_pred CCCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEE
Q 048078 46 VSRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAA 83 (378)
Q Consensus 46 ~~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~ 83 (378)
.-..+||+|+|.+.++....+.|.+. +++|..
T Consensus 16 ~~~~~kIgiIG~G~mG~alA~~L~~~------G~~V~~ 47 (245)
T 3dtt_A 16 YFQGMKIAVLGTGTVGRTMAGALADL------GHEVTI 47 (245)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHT------TCEEEE
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHC------CCEEEE
Confidence 34578999999999999998998875 577643
No 425
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=21.50 E-value=2.5e+02 Score=21.22 Aligned_cols=74 Identities=12% Similarity=0.121 Sum_probs=40.0
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecC--CCCCCc
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFT--PERAGE 125 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~--~~~~~~ 125 (378)
.++||+++..+......|+.+++.. .+++++..+.... .+.+.+.+...... +.. ....+.
T Consensus 8 ~~~~iLivdd~~~~~~~l~~~L~~~----~~~~~v~~~~~~~------------~al~~l~~~~~dlv-i~d~~l~~~~g 70 (143)
T 2qv0_A 8 EKMKVIIVEDEFLAQQELSWLINTH----SQMEIVGSFDDGL------------DVLKFLQHNKVDAI-FLDINIPSLDG 70 (143)
T ss_dssp --CEEEEECSCHHHHHHHHHHHHHH----SCCEEEEEESCHH------------HHHHHHHHCCCSEE-EECSSCSSSCH
T ss_pred CceEEEEEcCCHHHHHHHHHHHHhC----CCceEEEEeCCHH------------HHHHHHHhCCCCEE-EEecCCCCCCH
Confidence 4689999998877777777777642 1455554444322 23455555554322 222 122344
Q ss_pred HHHHHHHHhcCCc
Q 048078 126 DAFLSNLRALQPE 138 (378)
Q Consensus 126 ~~~~~~l~~~~~D 138 (378)
-++++.+++..+.
T Consensus 71 ~~~~~~l~~~~~~ 83 (143)
T 2qv0_A 71 VLLAQNISQFAHK 83 (143)
T ss_dssp HHHHHHHTTSTTC
T ss_pred HHHHHHHHccCCC
Confidence 5666777665443
No 426
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=21.49 E-value=68 Score=30.41 Aligned_cols=33 Identities=15% Similarity=0.104 Sum_probs=27.1
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEc
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVT 86 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt 86 (378)
++||++.|.+..+...++.|.+. .++||++|..
T Consensus 3 ~ikVgI~G~GrIGr~l~R~l~~~-----p~vevvaI~d 35 (337)
T 3e5r_O 3 KIKIGINGFGRIGRLVARVALQS-----EDVELVAVND 35 (337)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTC-----SSEEEEEEEC
T ss_pred ceEEEEECcCHHHHHHHHHHhCC-----CCeEEEEEEC
Confidence 47999999999888888988764 3689998864
No 427
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=21.48 E-value=73 Score=29.14 Aligned_cols=24 Identities=17% Similarity=0.181 Sum_probs=19.1
Q ss_pred CCceEEEEecCcchHHHHHHHHHc
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNA 71 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~ 71 (378)
++|||+++|.+.++......|...
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~ 29 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQR 29 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC
Confidence 368999999999888877777664
No 428
>3k32_A Uncharacterized protein MJ0690; predicted subunit of tRNA methyltransferase, methanocaldococcus jannaschii DSM , PSI- 2; 2.50A {Methanocaldococcus jannaschii}
Probab=21.43 E-value=1.4e+02 Score=25.48 Aligned_cols=57 Identities=11% Similarity=-0.067 Sum_probs=37.3
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCce
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADL 116 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~ 116 (378)
..||++.-|+..-..++-.++.. .++++.+|..+.... . ....+.++|+++|||++.
T Consensus 6 ~~kv~v~~SGG~DS~~ll~ll~~-----~g~~v~~~~v~~~~~---~---~~~~~~~~a~~lgi~~~~ 62 (203)
T 3k32_A 6 LMDVHVLFSGGKDSSLSAVILKK-----LGYNPHLITINFGVI---P---SYKLAEETAKILGFKHKV 62 (203)
T ss_dssp CEEEEEECCCSHHHHHHHHHHHH-----TTEEEEEEEEECSSS---C---TTHHHHHHHHHHTCEEEE
T ss_pred CCeEEEEEECcHHHHHHHHHHHH-----cCCCeEEEEEeCCCc---h---HHHHHHHHHHHhCCCEEE
Confidence 35888888886655666566553 257777765443221 1 345789999999999653
No 429
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=21.43 E-value=1.2e+02 Score=26.55 Aligned_cols=31 Identities=13% Similarity=-0.061 Sum_probs=20.4
Q ss_pred CceEEEEecC-cchHHHHHHHHHccCCCCCCceEEEEE
Q 048078 49 KKPLVFLGSP-QVSVNVLDALFNASSSPDSIFEVAAIV 85 (378)
Q Consensus 49 ~~rIvf~Gs~-~~a~~~L~~L~~~~~~~~~~~ei~~Vv 85 (378)
.++|++.|.. .++..+.+.|++. +++|+++.
T Consensus 21 ~k~vlItGasggiG~~la~~l~~~------G~~v~~~~ 52 (274)
T 1ja9_A 21 GKVALTTGAGRGIGRGIAIELGRR------GASVVVNY 52 (274)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHT------TCEEEEEE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC------CCEEEEEc
Confidence 4578888754 4566677888775 57766543
No 430
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=21.40 E-value=1.9e+02 Score=27.01 Aligned_cols=75 Identities=12% Similarity=0.086 Sum_probs=40.9
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCc-eEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIF-EVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~-ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
--+|++.|.+..+..+++.+... +. +|+++...+.+ .++|+++|... ++...+. +++
T Consensus 193 g~~VlV~GaG~vG~~a~qla~~~------Ga~~Vi~~~~~~~~-------------~~~~~~lGa~~--vi~~~~~-~~~ 250 (374)
T 1cdo_A 193 GSTCAVFGLGAVGLAAVMGCHSA------GAKRIIAVDLNPDK-------------FEKAKVFGATD--FVNPNDH-SEP 250 (374)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT------TCSEEEEECSCGGG-------------HHHHHHTTCCE--EECGGGC-SSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHc------CCCEEEEEcCCHHH-------------HHHHHHhCCce--EEecccc-chh
Confidence 34899999876666665544432 45 55544333221 57888999863 3332210 011
Q ss_pred HHHHHH---hcCCcEEEEecC
Q 048078 128 FLSNLR---ALQPELCITAAY 145 (378)
Q Consensus 128 ~~~~l~---~~~~Dliv~~~~ 145 (378)
+.+.++ ...+|++|-+.-
T Consensus 251 ~~~~~~~~~~~g~D~vid~~g 271 (374)
T 1cdo_A 251 ISQVLSKMTNGGVDFSLECVG 271 (374)
T ss_dssp HHHHHHHHHTSCBSEEEECSC
T ss_pred HHHHHHHHhCCCCCEEEECCC
Confidence 223232 237999987653
No 431
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=21.39 E-value=1.7e+02 Score=25.17 Aligned_cols=79 Identities=15% Similarity=0.218 Sum_probs=40.9
Q ss_pred CceEEEEecCc-chHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCc-H
Q 048078 49 KKPLVFLGSPQ-VSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGE-D 126 (378)
Q Consensus 49 ~~rIvf~Gs~~-~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~-~ 126 (378)
.+++++.|... ++..+.+.|++. +++|+.+.-+++. ...+.+..++.+.... ++.. ++.+ +
T Consensus 5 ~k~vlITGas~gIG~~~a~~l~~~------G~~v~~~~r~~~~---------~~~~~~~~~~~~~~~~-~~~~-D~~~~~ 67 (247)
T 3lyl_A 5 EKVALVTGASRGIGFEVAHALASK------GATVVGTATSQAS---------AEKFENSMKEKGFKAR-GLVL-NISDIE 67 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHT------TCEEEEEESSHHH---------HHHHHHHHHHTTCCEE-EEEC-CTTCHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHC------CCEEEEEeCCHHH---------HHHHHHHHHhcCCceE-EEEe-cCCCHH
Confidence 35677777544 566677788775 5776655432211 0123444455565533 2222 3333 3
Q ss_pred HHHHHHHhc-----CCcEEEEec
Q 048078 127 AFLSNLRAL-----QPELCITAA 144 (378)
Q Consensus 127 ~~~~~l~~~-----~~Dliv~~~ 144 (378)
++.+.+++. .+|++|..+
T Consensus 68 ~~~~~~~~~~~~~~~id~li~~A 90 (247)
T 3lyl_A 68 SIQNFFAEIKAENLAIDILVNNA 90 (247)
T ss_dssp HHHHHHHHHHHTTCCCSEEEECC
T ss_pred HHHHHHHHHHHHcCCCCEEEECC
Confidence 333333332 689888765
No 432
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=21.32 E-value=59 Score=29.49 Aligned_cols=24 Identities=13% Similarity=-0.056 Sum_probs=20.0
Q ss_pred CCceEEEEecCcchHHHHHHHHHc
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNA 71 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~ 71 (378)
.+|||+|+|.+.++......|.++
T Consensus 7 ~~m~I~iiG~G~mG~~~a~~L~~~ 30 (317)
T 2qyt_A 7 QPIKIAVFGLGGVGGYYGAMLALR 30 (317)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhC
Confidence 468999999999988887777764
No 433
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=21.31 E-value=1.2e+02 Score=27.93 Aligned_cols=90 Identities=12% Similarity=0.124 Sum_probs=43.5
Q ss_pred CCceEEEEe-cCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcH
Q 048078 48 RKKPLVFLG-SPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGED 126 (378)
Q Consensus 48 ~~~rIvf~G-s~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~ 126 (378)
..++|++.| ++-++..+.+.|++.. .+++|+++.-.+.......... ..+.......+.... ++. -++.+.
T Consensus 9 ~~~~vlVTGatG~IG~~l~~~L~~~~----~g~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~-~Dl~d~ 80 (362)
T 3sxp_A 9 ENQTILITGGAGFVGSNLAFHFQENH----PKAKVVVLDKFRSNTLFSNNRP--SSLGHFKNLIGFKGE-VIA-ADINNP 80 (362)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHC----TTSEEEEEECCCCC-------C--CCCCCGGGGTTCCSE-EEE-CCTTCH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhC----CCCeEEEEECCCccccccccch--hhhhhhhhccccCce-EEE-CCCCCH
Confidence 367999997 4556666778888721 1688877654332100000000 000000111122211 222 345555
Q ss_pred HHHHHHHhcCCcEEEEecC
Q 048078 127 AFLSNLRALQPELCITAAY 145 (378)
Q Consensus 127 ~~~~~l~~~~~Dliv~~~~ 145 (378)
+.++.+...++|++|-++.
T Consensus 81 ~~~~~~~~~~~D~vih~A~ 99 (362)
T 3sxp_A 81 LDLRRLEKLHFDYLFHQAA 99 (362)
T ss_dssp HHHHHHTTSCCSEEEECCC
T ss_pred HHHHHhhccCCCEEEECCc
Confidence 5555554567998887664
No 434
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=21.28 E-value=3.4e+02 Score=23.93 Aligned_cols=31 Identities=10% Similarity=0.004 Sum_probs=20.7
Q ss_pred CCceEEEEecCc-chHHHHHHHHHccCCCCCCceEEEE
Q 048078 48 RKKPLVFLGSPQ-VSVNVLDALFNASSSPDSIFEVAAI 84 (378)
Q Consensus 48 ~~~rIvf~Gs~~-~a~~~L~~L~~~~~~~~~~~ei~~V 84 (378)
..++|++.|... ++..+.+.|++. +++|+++
T Consensus 25 ~~k~vlITGasggiG~~la~~L~~~------G~~V~~~ 56 (302)
T 1w6u_A 25 QGKVAFITGGGTGLGKGMTTLLSSL------GAQCVIA 56 (302)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT------TCEEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC------CCEEEEE
Confidence 346788888554 566677778775 5776654
No 435
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=21.23 E-value=50 Score=26.31 Aligned_cols=83 Identities=13% Similarity=0.155 Sum_probs=49.2
Q ss_pred CCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCcee-cCCCCCCc
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLI-FTPERAGE 125 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v-~~~~~~~~ 125 (378)
.+++||++.=-.......|+.+++.. +++++++..+. ....+++++........ ..-...+.
T Consensus 6 ~r~~rILiVdD~~~~~~~l~~~L~~~-----G~~v~~~a~~g------------~eAl~~~~~~~~DlvllDi~mP~~~G 68 (123)
T 2lpm_A 6 ERRLRVLVVEDESMIAMLIEDTLCEL-----GHEVAATASRM------------QEALDIARKGQFDIAIIDVNLDGEPS 68 (123)
T ss_dssp CCCCCEEEESSSTTTSHHHHHHHHHH-----CCCCCBCSCCH------------HHHHHHHHHCCSSEEEECSSSSSCCS
T ss_pred CCCCEEEEEeCCHHHHHHHHHHHHHC-----CCEEEEEECCH------------HHHHHHHHhCCCCEEEEecCCCCCCH
Confidence 45789988877777777888877652 56654332221 13456666665543211 11233456
Q ss_pred HHHHHHHHhcCCcEEEEecCC
Q 048078 126 DAFLSNLRALQPELCITAAYG 146 (378)
Q Consensus 126 ~~~~~~l~~~~~Dliv~~~~~ 146 (378)
-++.+.+++.+.-++++.+|.
T Consensus 69 ~el~~~lr~~~ipvI~lTa~~ 89 (123)
T 2lpm_A 69 YPVADILAERNVPFIFATGYG 89 (123)
T ss_dssp HHHHHHHHHTCCSSCCBCTTC
T ss_pred HHHHHHHHcCCCCEEEEecCc
Confidence 677888887666566666664
No 436
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=21.23 E-value=70 Score=31.45 Aligned_cols=30 Identities=13% Similarity=0.070 Sum_probs=24.7
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEE
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAI 84 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~V 84 (378)
+|||+|+|.+.++.+....|.+. +++|+++
T Consensus 2 ~mkI~VIG~G~vG~~lA~~La~~------G~~V~~~ 31 (450)
T 3gg2_A 2 SLDIAVVGIGYVGLVSATCFAEL------GANVRCI 31 (450)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHhc------CCEEEEE
Confidence 48999999999999988888775 5777654
No 437
>3r5t_A Ferric vibriobactin ABC transporter, periplasmic vibriobactin-binding protein; iron-vibriobactin transport protein; HET: VBN; 1.45A {Vibrio cholerae} PDB: 3r5s_A*
Probab=21.22 E-value=1.7e+02 Score=26.41 Aligned_cols=75 Identities=17% Similarity=0.155 Sum_probs=40.9
Q ss_pred CCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcH
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGED 126 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~ 126 (378)
..+-||+.++.. ..+.|+.. +..++++-...... ...+..+.+...++|. +-.....+
T Consensus 21 ~~p~RIV~l~~~-----~~e~l~aL------G~~~Vg~~~~~~~~-------~~~~~~~~~~~~~~~~--vG~~~~~n-- 78 (305)
T 3r5t_A 21 SQPKRILSTAVT-----VTGTLLAI------DAPVIASAATTQST-------FFEQWRKLAELRQVKK--LWPAGSVD-- 78 (305)
T ss_dssp SCCSSEEESCHH-----HHHHHHHT------TCCEEEEEECTTSC-------CCTTTHHHHHHTTCEE--EEETTCCC--
T ss_pred CCCeEEEEECcc-----hhHHHHHc------CCceEEEecccccc-------ccchhHhhHhhcCCCc--cCCCCCCC--
Confidence 347799987653 34455543 45788886532110 1111222234567872 22222333
Q ss_pred HHHHHHHhcCCcEEEEecC
Q 048078 127 AFLSNLRALQPELCITAAY 145 (378)
Q Consensus 127 ~~~~~l~~~~~Dliv~~~~ 145 (378)
+|.|.+.+||+||...+
T Consensus 79 --~E~I~al~PDLIi~~~~ 95 (305)
T 3r5t_A 79 --LESVYVEQPDLIVVSMI 95 (305)
T ss_dssp --HHHHHHHCCSEEEEESS
T ss_pred --HHHHHhcCCCEEEEecc
Confidence 35566789999998765
No 438
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=21.00 E-value=90 Score=28.08 Aligned_cols=28 Identities=14% Similarity=0.363 Sum_probs=23.4
Q ss_pred CceEEEEec-CcchHHHHHHHHHccCCCCCCceEE
Q 048078 49 KKPLVFLGS-PQVSVNVLDALFNASSSPDSIFEVA 82 (378)
Q Consensus 49 ~~rIvf~Gs-~~~a~~~L~~L~~~~~~~~~~~ei~ 82 (378)
.|||+|+|. +.++....+.|.+. +++|.
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~------g~~V~ 39 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDS------AHHLA 39 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHS------SSEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC------CCEEE
Confidence 479999999 99999998988875 57765
No 439
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=20.98 E-value=1.6e+02 Score=28.42 Aligned_cols=31 Identities=19% Similarity=0.060 Sum_probs=23.7
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEE
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAI 84 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~V 84 (378)
...||+++|++..+....+++.+. +++++.+
T Consensus 34 ~~~~IlIlG~G~lg~~~~~aa~~l------G~~v~v~ 64 (419)
T 4e4t_A 34 PGAWLGMVGGGQLGRMFCFAAQSM------GYRVAVL 64 (419)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT------TCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC------CCEEEEE
Confidence 456999999998888877777664 6887544
No 440
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=20.97 E-value=47 Score=30.01 Aligned_cols=22 Identities=23% Similarity=0.330 Sum_probs=15.7
Q ss_pred CceEEEEecCcchHHHHHHHHH
Q 048078 49 KKPLVFLGSPQVSVNVLDALFN 70 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~ 70 (378)
+|||+|+|.+.++....+.|.+
T Consensus 2 ~m~I~iIG~G~mG~~la~~l~~ 23 (276)
T 2i76_A 2 SLVLNFVGTGTLTRFFLECLKD 23 (276)
T ss_dssp --CCEEESCCHHHHHHHHTTC-
T ss_pred CceEEEEeCCHHHHHHHHHHHH
Confidence 4799999999888777666643
No 441
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=20.81 E-value=2.1e+02 Score=26.37 Aligned_cols=77 Identities=13% Similarity=0.139 Sum_probs=42.4
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCC-CC-cH
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPER-AG-ED 126 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~-~~-~~ 126 (378)
.-+|++.|.+.++....+.+... +.+|+++...+. -.++++++|... ++...+ .+ .+
T Consensus 169 g~~VlV~GaG~vG~~a~qla~~~------Ga~Vi~~~~~~~-------------~~~~~~~lGa~~--~~~~~~~~~~~~ 227 (352)
T 1e3j_A 169 GTTVLVIGAGPIGLVSVLAAKAY------GAFVVCTARSPR-------------RLEVAKNCGADV--TLVVDPAKEEES 227 (352)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCHH-------------HHHHHHHTTCSE--EEECCTTTSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHc------CCEEEEEcCCHH-------------HHHHHHHhCCCE--EEcCcccccHHH
Confidence 45899999876665555544332 566544432221 257888999873 333221 11 22
Q ss_pred HHHHHHH---hcCCcEEEEecCC
Q 048078 127 AFLSNLR---ALQPELCITAAYG 146 (378)
Q Consensus 127 ~~~~~l~---~~~~Dliv~~~~~ 146 (378)
++.+... ...+|+++-+.-.
T Consensus 228 ~i~~~~~~~~g~g~D~vid~~g~ 250 (352)
T 1e3j_A 228 SIIERIRSAIGDLPNVTIDCSGN 250 (352)
T ss_dssp HHHHHHHHHSSSCCSEEEECSCC
T ss_pred HHHHHhccccCCCCCEEEECCCC
Confidence 3333332 2469999876643
No 442
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=20.80 E-value=3.4e+02 Score=23.43 Aligned_cols=31 Identities=13% Similarity=0.157 Sum_probs=20.2
Q ss_pred CceEEEEecCc-chHHHHHHHHHccCCCCCCceEEEEE
Q 048078 49 KKPLVFLGSPQ-VSVNVLDALFNASSSPDSIFEVAAIV 85 (378)
Q Consensus 49 ~~rIvf~Gs~~-~a~~~L~~L~~~~~~~~~~~ei~~Vv 85 (378)
..++++.|... ++..+.+.|.+. +++|+.+-
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~------G~~V~~~~ 38 (257)
T 3tpc_A 7 SRVFIVTGASSGLGAAVTRMLAQE------GATVLGLD 38 (257)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHT------TCEEEEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC------CCEEEEEe
Confidence 34677778544 666777888775 57765543
No 443
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=20.74 E-value=87 Score=29.54 Aligned_cols=34 Identities=21% Similarity=0.223 Sum_probs=27.5
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcC
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQ 87 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~ 87 (378)
++||+++|.|..+...++.|.+. .++++++|...
T Consensus 1 mikVgIiGaG~iG~~l~r~L~~~-----~~~elvav~d~ 34 (337)
T 1cf2_P 1 MKAVAINGYGTVGKRVADAIAQQ-----DDMKVIGVSKT 34 (337)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTS-----SSEEEEEEEES
T ss_pred CeEEEEEeECHHHHHHHHHHHcC-----CCcEEEEEEcC
Confidence 47999999999888888888664 36899988754
No 444
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=20.74 E-value=1.6e+02 Score=25.95 Aligned_cols=28 Identities=18% Similarity=0.290 Sum_probs=18.8
Q ss_pred ceEEEEec-CcchHHHHHHHHHccCCCCCCceEEEE
Q 048078 50 KPLVFLGS-PQVSVNVLDALFNASSSPDSIFEVAAI 84 (378)
Q Consensus 50 ~rIvf~Gs-~~~a~~~L~~L~~~~~~~~~~~ei~~V 84 (378)
|||++.|. +.++..+.+.|+ . +++|.++
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~------g~~V~~~ 29 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-P------VGNLIAL 29 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-T------TSEEEEE
T ss_pred CeEEEECCCCHHHHHHHHHhh-c------CCeEEEe
Confidence 68999996 445555556666 3 5777665
No 445
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=20.68 E-value=1.8e+02 Score=27.21 Aligned_cols=75 Identities=11% Similarity=0.041 Sum_probs=40.8
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCc-eEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIF-EVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~-ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
--+|++.|.+..+..+++.+... +. +|+++...+.+ .++|+++|... ++...+. +++
T Consensus 192 g~~VlV~GaG~vG~~a~qla~~~------Ga~~Vi~~~~~~~~-------------~~~~~~lGa~~--vi~~~~~-~~~ 249 (374)
T 2jhf_A 192 GSTCAVFGLGGVGLSVIMGCKAA------GAARIIGVDINKDK-------------FAKAKEVGATE--CVNPQDY-KKP 249 (374)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT------TCSEEEEECSCGGG-------------HHHHHHTTCSE--EECGGGC-SSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHc------CCCeEEEEcCCHHH-------------HHHHHHhCCce--Eeccccc-chh
Confidence 35899999876665555544332 45 55554333221 57788999863 3332211 112
Q ss_pred HHHHHHh---cCCcEEEEecC
Q 048078 128 FLSNLRA---LQPELCITAAY 145 (378)
Q Consensus 128 ~~~~l~~---~~~Dliv~~~~ 145 (378)
+.+.+++ -.+|+++-+.-
T Consensus 250 ~~~~~~~~~~~g~D~vid~~g 270 (374)
T 2jhf_A 250 IQEVLTEMSNGGVDFSFEVIG 270 (374)
T ss_dssp HHHHHHHHTTSCBSEEEECSC
T ss_pred HHHHHHHHhCCCCcEEEECCC
Confidence 3333332 37899887653
No 446
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=20.61 E-value=1.5e+02 Score=22.59 Aligned_cols=24 Identities=0% Similarity=0.141 Sum_probs=17.6
Q ss_pred CCceEEEEecCcchHHHHHHHHHc
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNA 71 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~ 71 (378)
.++||+++..+......|+.+++.
T Consensus 3 ~~~~iLivdd~~~~~~~l~~~L~~ 26 (142)
T 2qxy_A 3 LTPTVMVVDESRITFLAVKNALEK 26 (142)
T ss_dssp CCCEEEEECSCHHHHHHHHHHHGG
T ss_pred CCCeEEEEeCCHHHHHHHHHHHHh
Confidence 357888888887667777777764
No 447
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=20.57 E-value=1.8e+02 Score=26.94 Aligned_cols=79 Identities=10% Similarity=0.122 Sum_probs=43.3
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCce-EEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIFE-VAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~e-i~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
.-+|++.|.+..+..+++..... +.+ |+++...+. -.++|++. .+....+..+...+++
T Consensus 180 g~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi~~~~~~~-------------~~~~a~~l-~~~~~~~~~~~~~~~~ 239 (363)
T 3m6i_A 180 GDPVLICGAGPIGLITMLCAKAA------GACPLVITDIDEG-------------RLKFAKEI-CPEVVTHKVERLSAEE 239 (363)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHT------TCCSEEEEESCHH-------------HHHHHHHH-CTTCEEEECCSCCHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHc------CCCEEEEECCCHH-------------HHHHHHHh-chhcccccccccchHH
Confidence 45789999876666665544332 555 555443332 24677776 4322112222233456
Q ss_pred HHHHHHh----cCCcEEEEecCCC
Q 048078 128 FLSNLRA----LQPELCITAAYGN 147 (378)
Q Consensus 128 ~~~~l~~----~~~Dliv~~~~~~ 147 (378)
+.+.+++ ..+|+++-+.-+.
T Consensus 240 ~~~~v~~~t~g~g~Dvvid~~g~~ 263 (363)
T 3m6i_A 240 SAKKIVESFGGIEPAVALECTGVE 263 (363)
T ss_dssp HHHHHHHHTSSCCCSEEEECSCCH
T ss_pred HHHHHHHHhCCCCCCEEEECCCCh
Confidence 6665554 3699998766543
No 448
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=20.57 E-value=48 Score=32.97 Aligned_cols=33 Identities=24% Similarity=0.313 Sum_probs=21.5
Q ss_pred CCCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEE
Q 048078 46 VSRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAI 84 (378)
Q Consensus 46 ~~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~V 84 (378)
.+.|.||+++|++.-+..+.+.|.+ .+++|+.|
T Consensus 39 ~~~KprVVIIGgG~AGl~~A~~L~~------~~~~VtLI 71 (502)
T 4g6h_A 39 HSDKPNVLILGSGWGAISFLKHIDT------KKYNVSII 71 (502)
T ss_dssp SCSSCEEEEECSSHHHHHHHHHSCT------TTCEEEEE
T ss_pred CCCCCCEEEECCcHHHHHHHHHhhh------CCCcEEEE
Confidence 4557899999999655555555532 25776544
No 449
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=20.52 E-value=3.8e+02 Score=23.61 Aligned_cols=78 Identities=12% Similarity=0.100 Sum_probs=41.1
Q ss_pred CceEEEEec---CcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCc
Q 048078 49 KKPLVFLGS---PQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGE 125 (378)
Q Consensus 49 ~~rIvf~Gs---~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~ 125 (378)
..+|++.|. +.++..+.+.|++. +++|+.+.-++ .. ...+.++..+.+- .. ++. -++.+
T Consensus 21 ~k~vlVTGas~~~gIG~~ia~~l~~~------G~~V~~~~r~~-~~--------~~~~~~l~~~~~~-~~-~~~-~Dl~~ 82 (285)
T 2p91_A 21 GKRALITGVANERSIAYGIAKSFHRE------GAQLAFTYATP-KL--------EKRVREIAKGFGS-DL-VVK-CDVSL 82 (285)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHT------TCEEEEEESSG-GG--------HHHHHHHHHHTTC-CC-EEE-CCTTC
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHc------CCEEEEEeCCH-HH--------HHHHHHHHHhcCC-eE-EEE-cCCCC
Confidence 346888885 46777888888875 57766543221 10 1134455554442 11 222 23444
Q ss_pred HH-HHHHHHhc-----CCcEEEEec
Q 048078 126 DA-FLSNLRAL-----QPELCITAA 144 (378)
Q Consensus 126 ~~-~~~~l~~~-----~~Dliv~~~ 144 (378)
.+ +.+.+++. .+|++|..+
T Consensus 83 ~~~v~~~~~~~~~~~g~iD~lv~~A 107 (285)
T 2p91_A 83 DEDIKNLKKFLEENWGSLDIIVHSI 107 (285)
T ss_dssp HHHHHHHHHHHHHHTSCCCEEEECC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECC
Confidence 33 33333322 689888766
No 450
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=20.51 E-value=5.5e+02 Score=24.30 Aligned_cols=157 Identities=10% Similarity=0.046 Sum_probs=86.7
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
...+|+|+|.|.++..+.+.|... +++|.+ .++... .+.+.+.|+. .. +
T Consensus 175 ~gktvGIIGlG~IG~~vA~~l~~f------G~~V~~--~d~~~~------------~~~~~~~g~~---~~-----~--- 223 (365)
T 4hy3_A 175 AGSEIGIVGFGDLGKALRRVLSGF------RARIRV--FDPWLP------------RSMLEENGVE---PA-----S--- 223 (365)
T ss_dssp SSSEEEEECCSHHHHHHHHHHTTS------CCEEEE--ECSSSC------------HHHHHHTTCE---EC-----C---
T ss_pred CCCEEEEecCCcccHHHHHhhhhC------CCEEEE--ECCCCC------------HHHHhhcCee---eC-----C---
Confidence 356999999999988888876542 566643 333211 2455667765 21 1
Q ss_pred HHHHHHhcCCcEEEEecC-----CCcCChhhhcCCCCceEEEccCCCCCCCCc----hHHHHHHHcCCcEEEEEEEEecC
Q 048078 128 FLSNLRALQPELCITAAY-----GNILPSKFLNIPPMGTVNIHPSLLPLYRGA----APVQRALQGGAKETGVSLAFTVR 198 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~~-----~~ilp~~il~~~~~g~iNiHpSlLP~yRG~----~pi~wai~~g~~~tGvTih~~~~ 198 (378)
+.+.+ .+.|++++..- .++|..+.++..+-+.+=+-- -||. ..+..|+.+|.-..|.-++.-..
T Consensus 224 l~ell--~~aDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~-----aRG~~vde~aL~~aL~~g~i~aaLDV~~~EP 296 (365)
T 4hy3_A 224 LEDVL--TKSDFIFVVAAVTSENKRFLGAEAFSSMRRGAAFILL-----SRADVVDFDALMAAVSSGHIVAASDVYPEEP 296 (365)
T ss_dssp HHHHH--HSCSEEEECSCSSCC---CCCHHHHHTSCTTCEEEEC-----SCGGGSCHHHHHHHHHTTSSEEEESCCSSSS
T ss_pred HHHHH--hcCCEEEEcCcCCHHHHhhcCHHHHhcCCCCcEEEEC-----cCCchhCHHHHHHHHHcCCceEEeeCCCCCC
Confidence 22333 36899987643 457888898877766433332 2664 67888899987555554443222
Q ss_pred CCCCCCeeEEEEEEeCCCC--CHHHHHHHHHHHHHHHHHHHHHHhHcCCC
Q 048078 199 ALDAGPVIAREKMEVDDQI--KAPELLVLLFSEGSELLIRELPSILDGSA 246 (378)
Q Consensus 199 ~~D~G~Ii~Q~~~~I~~~d--t~~~L~~kl~~~~~~ll~~~l~~l~~g~~ 246 (378)
-...-+.+.-..+-+.|.- ...+-..++ .++..+.|..+.+|..
T Consensus 297 l~~~~pL~~~~nvilTPHia~~t~e~~~~~----~~~~~~ni~~~~~G~~ 342 (365)
T 4hy3_A 297 LPLDHPVRSLKGFIRSAHRAGALDSAFKKM----GDMVLEDMDLMDRGLP 342 (365)
T ss_dssp CCTTCGGGTCTTEEECCSCSSCCHHHHHHH----HHHHHHHHHHHHTTCC
T ss_pred CCCCChhhcCCCEEECCccccCHHHHHHHH----HHHHHHHHHHHHcCCC
Confidence 1111223222234444432 122333444 3445556666777764
No 451
>2p0y_A Hypothetical protein LP_0780; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 3.00A {Lactobacillus plantarum}
Probab=20.49 E-value=81 Score=30.08 Aligned_cols=37 Identities=22% Similarity=0.319 Sum_probs=25.9
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCC
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPS 90 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~ 90 (378)
+.+||++||.+.-....|+.|.+. ..++.+|||-.|.
T Consensus 9 ~~~kIVvigGGtGl~~ll~gLk~~------~~~iTaIVtvaDD 45 (341)
T 2p0y_A 9 QRPKIVVIGGGTGLPVVLNGLRKQ------AVDITAVVTVADD 45 (341)
T ss_dssp -CCEEEEECCGGGHHHHHHHHHHS------SSEEEEECC----
T ss_pred CCCeEEEECCcccHHHHHHHHHhC------CCCeEEEEECCcC
Confidence 468999999987566677888664 5789999987765
No 452
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=20.48 E-value=1.1e+02 Score=28.83 Aligned_cols=73 Identities=14% Similarity=0.033 Sum_probs=40.4
Q ss_pred CceEEEEecCcchHHHHHHHHHccCCCCCCc-eEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 49 KKPLVFLGSPQVSVNVLDALFNASSSPDSIF-EVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 49 ~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~-ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
--+|+++|.+.++...++.+... +. .|+++...+. -.++|+++|.. ++...+.+ .
T Consensus 186 g~~VlV~GaG~vG~~aiqlAk~~------Ga~~Vi~~~~~~~-------------~~~~a~~lGa~---~i~~~~~~--~ 241 (398)
T 1kol_A 186 GSTVYVAGAGPVGLAAAASARLL------GAAVVIVGDLNPA-------------RLAHAKAQGFE---IADLSLDT--P 241 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT------TCSEEEEEESCHH-------------HHHHHHHTTCE---EEETTSSS--C
T ss_pred CCEEEEECCcHHHHHHHHHHHHC------CCCeEEEEcCCHH-------------HHHHHHHcCCc---EEccCCcc--h
Confidence 35899999886666665544332 45 4544433222 25788999985 22222211 1
Q ss_pred HHHHHHh----cCCcEEEEecC
Q 048078 128 FLSNLRA----LQPELCITAAY 145 (378)
Q Consensus 128 ~~~~l~~----~~~Dliv~~~~ 145 (378)
+.+.+++ ..+|+++-+.-
T Consensus 242 ~~~~v~~~t~g~g~Dvvid~~G 263 (398)
T 1kol_A 242 LHEQIAALLGEPEVDCAVDAVG 263 (398)
T ss_dssp HHHHHHHHHSSSCEEEEEECCC
T ss_pred HHHHHHHHhCCCCCCEEEECCC
Confidence 2233332 36899887654
No 453
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=20.44 E-value=1.6e+02 Score=27.93 Aligned_cols=77 Identities=10% Similarity=0.135 Sum_probs=42.7
Q ss_pred CceEEEEe-cCcchHHHHHHHHHccCCCCCC-ceEEEEEcCCCCCCCCCCccCChHHHHHHH----HCC---CCCceecC
Q 048078 49 KKPLVFLG-SPQVSVNVLDALFNASSSPDSI-FEVAAIVTQPPSRRDRGRKVLPSPVAQYAL----DRG---FPADLIFT 119 (378)
Q Consensus 49 ~~rIvf~G-s~~~a~~~L~~L~~~~~~~~~~-~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~----~~g---Ip~~~v~~ 119 (378)
.++|++.| ++.++..+.+.|++. + ++|+++ .... ..+.++.+ ... ..++ +.
T Consensus 35 ~k~vLVTGatG~IG~~l~~~L~~~------g~~~V~~~-~r~~-----------~~~~~~~~~l~~~~~~~~~~v~-~~- 94 (399)
T 3nzo_A 35 QSRFLVLGGAGSIGQAVTKEIFKR------NPQKLHVV-DISE-----------NNMVELVRDIRSSFGYINGDFQ-TF- 94 (399)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTT------CCSEEEEE-CSCH-----------HHHHHHHHHHHHHTCCCSSEEE-EE-
T ss_pred CCEEEEEcCChHHHHHHHHHHHHC------CCCEEEEE-ECCc-----------chHHHHHHHHHHhcCCCCCcEE-EE-
Confidence 57899999 566777777888775 4 565544 2211 12333322 211 1211 22
Q ss_pred CCCCCcHHHHHHH-HhcCCcEEEEecC
Q 048078 120 PERAGEDAFLSNL-RALQPELCITAAY 145 (378)
Q Consensus 120 ~~~~~~~~~~~~l-~~~~~Dliv~~~~ 145 (378)
.-++.+.+.++.+ +..++|+++-++.
T Consensus 95 ~~Dl~d~~~~~~~~~~~~~D~Vih~Aa 121 (399)
T 3nzo_A 95 ALDIGSIEYDAFIKADGQYDYVLNLSA 121 (399)
T ss_dssp CCCTTSHHHHHHHHHCCCCSEEEECCC
T ss_pred EEeCCCHHHHHHHHHhCCCCEEEECCC
Confidence 3456666655554 4478999987664
No 454
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=20.42 E-value=3e+02 Score=26.31 Aligned_cols=95 Identities=11% Similarity=0.136 Sum_probs=52.1
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCC-----
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPER----- 122 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~----- 122 (378)
...+|+++|.+..+..+.+.+... +.+|. ++++... ..+.+++.|..+. .+....
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~------Ga~V~--v~D~~~~-----------~~~~~~~lGa~~~-~~~~~~~~~~~ 230 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSL------GAIVR--AFDTRPE-----------VKEQVQSMGAEFL-ELDFKEEAGSG 230 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT------TCEEE--EECSCGG-----------GHHHHHHTTCEEC-CC--------C
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC------CCEEE--EEcCCHH-----------HHHHHHHcCCEEE-Eeccccccccc
Confidence 467999999998888887777653 56532 3333211 2345677776521 011100
Q ss_pred ------CCcH-------HHHHHHHhcCCcEEEEec-C-----CCcCChhhhcCCCCceEEE
Q 048078 123 ------AGED-------AFLSNLRALQPELCITAA-Y-----GNILPSKFLNIPPMGTVNI 164 (378)
Q Consensus 123 ------~~~~-------~~~~~l~~~~~Dliv~~~-~-----~~ilp~~il~~~~~g~iNi 164 (378)
..++ .+.+.+. ++|++|.+. . ..++..+.++..+.|.+=+
T Consensus 231 ~g~~~~~~~~~~~~~~~~l~e~~~--~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIV 289 (401)
T 1x13_A 231 DGYAKVMSDAFIKAEMELFAAQAK--EVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIV 289 (401)
T ss_dssp CHHHHHHSHHHHHHHHHHHHHHHH--HCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEE
T ss_pred ccchhhccHHHHHHHHHHHHHHhC--CCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEE
Confidence 0111 1223333 589999873 2 2667777777766553333
No 455
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=20.41 E-value=50 Score=30.47 Aligned_cols=78 Identities=10% Similarity=-0.046 Sum_probs=42.9
Q ss_pred CCceEEEEe-cCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCC-c
Q 048078 48 RKKPLVFLG-SPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAG-E 125 (378)
Q Consensus 48 ~~~rIvf~G-s~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~-~ 125 (378)
..-+|++.| ++.++..+.+.+... +.+|+++..++. -.+++++.|... ++...+.+ .
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~------Ga~Vi~~~~~~~-------------~~~~~~~~Ga~~--~~~~~~~~~~ 198 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKAL------GAKLIGTVSSPE-------------KAAHAKALGAWE--TIDYSHEDVA 198 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHH------TCEEEEEESSHH-------------HHHHHHHHTCSE--EEETTTSCHH
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHC------CCEEEEEeCCHH-------------HHHHHHHcCCCE--EEeCCCccHH
Confidence 345888888 777766666655443 567766554322 246778888653 33332222 1
Q ss_pred HHHHHHHHhcCCcEEEEecCC
Q 048078 126 DAFLSNLRALQPELCITAAYG 146 (378)
Q Consensus 126 ~~~~~~l~~~~~Dliv~~~~~ 146 (378)
+.+.+......+|+++-+.-.
T Consensus 199 ~~~~~~~~~~g~Dvvid~~g~ 219 (325)
T 3jyn_A 199 KRVLELTDGKKCPVVYDGVGQ 219 (325)
T ss_dssp HHHHHHTTTCCEEEEEESSCG
T ss_pred HHHHHHhCCCCceEEEECCCh
Confidence 222222223468888866543
No 456
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=20.41 E-value=3.7e+02 Score=22.87 Aligned_cols=31 Identities=10% Similarity=0.134 Sum_probs=20.3
Q ss_pred CCceEEEEecC-cchHHHHHHHHHccCCCCCCceEEEE
Q 048078 48 RKKPLVFLGSP-QVSVNVLDALFNASSSPDSIFEVAAI 84 (378)
Q Consensus 48 ~~~rIvf~Gs~-~~a~~~L~~L~~~~~~~~~~~ei~~V 84 (378)
...++++.|.. .++..+.+.|++. +++|+.+
T Consensus 13 ~~k~vlITGas~gIG~~ia~~l~~~------G~~V~~~ 44 (247)
T 3i1j_A 13 KGRVILVTGAARGIGAAAARAYAAH------GASVVLL 44 (247)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT------TCEEEEE
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC------CCEEEEE
Confidence 34567778854 4666677888775 5776544
No 457
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=20.40 E-value=2.3e+02 Score=24.90 Aligned_cols=80 Identities=11% Similarity=0.037 Sum_probs=41.3
Q ss_pred CceEEEEecC-cchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCc-H
Q 048078 49 KKPLVFLGSP-QVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGE-D 126 (378)
Q Consensus 49 ~~rIvf~Gs~-~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~-~ 126 (378)
..++++.|.. .++..+.+.|.+. +++|+.+..+.... ...+.+..++.|-... .+. -++.+ +
T Consensus 18 ~k~~lVTGas~gIG~aia~~l~~~------G~~V~~~~~~~~~~--------~~~~~~~~~~~~~~~~-~~~-~Dv~~~~ 81 (270)
T 3is3_A 18 GKVALVTGSGRGIGAAVAVHLGRL------GAKVVVNYANSTKD--------AEKVVSEIKALGSDAI-AIK-ADIRQVP 81 (270)
T ss_dssp TCEEEESCTTSHHHHHHHHHHHHT------TCEEEEEESSCHHH--------HHHHHHHHHHTTCCEE-EEE-CCTTSHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHC------CCEEEEEcCCCHHH--------HHHHHHHHHhcCCcEE-EEE-cCCCCHH
Confidence 3467777754 4666777888875 57776544332210 0123344455565533 222 23433 3
Q ss_pred HHHHHHHhc-----CCcEEEEec
Q 048078 127 AFLSNLRAL-----QPELCITAA 144 (378)
Q Consensus 127 ~~~~~l~~~-----~~Dliv~~~ 144 (378)
++.+.+++. .+|++|..+
T Consensus 82 ~v~~~~~~~~~~~g~id~lvnnA 104 (270)
T 3is3_A 82 EIVKLFDQAVAHFGHLDIAVSNS 104 (270)
T ss_dssp HHHHHHHHHHHHHSCCCEEECCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECC
Confidence 333334332 789888654
No 458
>2ebu_A Replication factor C subunit 1; A/B/A 3 layers, parallel beta-sheet, DNA replication, clamp loader, RFC1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.32 E-value=3.1e+02 Score=21.43 Aligned_cols=70 Identities=17% Similarity=0.180 Sum_probs=41.6
Q ss_pred CceEEEEecCc-chHHHHHHHHHccCCC-C--CCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCC
Q 048078 49 KKPLVFLGSPQ-VSVNVLDALFNASSSP-D--SIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAG 124 (378)
Q Consensus 49 ~~rIvf~Gs~~-~a~~~L~~L~~~~~~~-~--~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~ 124 (378)
-++|+|-|+-. ++..-++.+++...-. . -.-....||+..+. | + .=.+-|+++||+ |+ +
T Consensus 25 G~~~v~TG~l~~~~R~e~~~~i~~~Ggkv~~sVSkkTd~LV~G~~~--g------~-sKl~KA~~lgI~---Ii-----s 87 (112)
T 2ebu_A 25 GLIFVITGVLESIERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDS--G------Q-SKSDKAAALGTK---II-----D 87 (112)
T ss_dssp TCEEEECSCCSSSCHHHHHHHHHHTTCEECSSCCSSCCEEEECSSC--C------S-HHHHHHHHHTCE---EE-----E
T ss_pred CCEEEEeeeCCCCCHHHHHHHHHHcCCEEeccccCCeeEEEecCCC--C------h-HHHHHHHHcCCe---EE-----e
Confidence 57899999863 5778888888753210 0 01123344444321 1 1 124678899999 64 3
Q ss_pred cHHHHHHHHhc
Q 048078 125 EDAFLSNLRAL 135 (378)
Q Consensus 125 ~~~~~~~l~~~ 135 (378)
+++|++.|...
T Consensus 88 E~~f~~ll~~~ 98 (112)
T 2ebu_A 88 EDGLLNLIRTM 98 (112)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHhhC
Confidence 67788887653
No 459
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=20.31 E-value=2.4e+02 Score=24.82 Aligned_cols=30 Identities=13% Similarity=0.161 Sum_probs=19.7
Q ss_pred CceEEEEecC-cchHHHHHHHHHccCCCCCCceEEEE
Q 048078 49 KKPLVFLGSP-QVSVNVLDALFNASSSPDSIFEVAAI 84 (378)
Q Consensus 49 ~~rIvf~Gs~-~~a~~~L~~L~~~~~~~~~~~ei~~V 84 (378)
..++++.|.. .++..+.+.|++. +++|+++
T Consensus 21 ~k~~lVTGas~gIG~~ia~~l~~~------G~~V~~~ 51 (267)
T 1vl8_A 21 GRVALVTGGSRGLGFGIAQGLAEA------GCSVVVA 51 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT------TCEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC------CCEEEEE
Confidence 3467777744 4666777888775 5776554
No 460
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=20.26 E-value=2.9e+02 Score=23.85 Aligned_cols=77 Identities=10% Similarity=0.035 Sum_probs=42.7
Q ss_pred CceEEEEecCc-chHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCc-H
Q 048078 49 KKPLVFLGSPQ-VSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGE-D 126 (378)
Q Consensus 49 ~~rIvf~Gs~~-~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~-~ 126 (378)
..++++.|... ++..+.+.|++. +++|+++- ++. ..+.+.+++.+-... ++. -++.+ +
T Consensus 9 ~k~vlITGas~gIG~~~a~~l~~~------G~~V~~~~--r~~----------~~~~~~~~~~~~~~~-~~~-~D~~~~~ 68 (261)
T 3n74_A 9 GKVALITGAGSGFGEGMAKRFAKG------GAKVVIVD--RDK----------AGAERVAGEIGDAAL-AVA-ADISKEA 68 (261)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT------TCEEEEEE--SCH----------HHHHHHHHHHCTTEE-EEE-CCTTSHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHC------CCEEEEEc--CCH----------HHHHHHHHHhCCceE-EEE-ecCCCHH
Confidence 45788888554 566777888875 57765442 221 245666666654433 222 23333 3
Q ss_pred HHHHHHHhc-----CCcEEEEecC
Q 048078 127 AFLSNLRAL-----QPELCITAAY 145 (378)
Q Consensus 127 ~~~~~l~~~-----~~Dliv~~~~ 145 (378)
++.+.+++. .+|++|..+-
T Consensus 69 ~~~~~~~~~~~~~g~id~li~~Ag 92 (261)
T 3n74_A 69 DVDAAVEAALSKFGKVDILVNNAG 92 (261)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHhcCCCCEEEECCc
Confidence 333334332 7898887653
No 461
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=20.25 E-value=3.8e+02 Score=24.57 Aligned_cols=113 Identities=11% Similarity=0.010 Sum_probs=67.1
Q ss_pred CCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcH
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGED 126 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~ 126 (378)
-..++|+|+|.+..+....+.|... +++|.+ .++... . ..+.+.|+. .. +-+
T Consensus 140 l~g~~vgIIG~G~IG~~~A~~l~~~------G~~V~~--~d~~~~----------~--~~~~~~g~~---~~-----~l~ 191 (313)
T 2ekl_A 140 LAGKTIGIVGFGRIGTKVGIIANAM------GMKVLA--YDILDI----------R--EKAEKINAK---AV-----SLE 191 (313)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHT------TCEEEE--ECSSCC----------H--HHHHHTTCE---EC-----CHH
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHHC------CCEEEE--ECCCcc----------h--hHHHhcCce---ec-----CHH
Confidence 3456999999999999998888764 577643 233221 1 236677765 21 112
Q ss_pred HHHHHHHhcCCcEEEEec-----CCCcCChhhhcCCCCceEEEccCCCCCCCCc----hHHHHHHHcCCcEEEEEEEEec
Q 048078 127 AFLSNLRALQPELCITAA-----YGNILPSKFLNIPPMGTVNIHPSLLPLYRGA----APVQRALQGGAKETGVSLAFTV 197 (378)
Q Consensus 127 ~~~~~l~~~~~Dliv~~~-----~~~ilp~~il~~~~~g~iNiHpSlLP~yRG~----~pi~wai~~g~~~tGvTih~~~ 197 (378)
+.++ +.|+++++- ...++.++.++..+.+.+-+.-| ||. ..+..++.+| .-.|.-+-...
T Consensus 192 ---ell~--~aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~a-----rg~~vd~~aL~~aL~~g-~i~ga~lDv~~ 260 (313)
T 2ekl_A 192 ---ELLK--NSDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTS-----RAVAVNGKALLDYIKKG-KVYAYATDVFW 260 (313)
T ss_dssp ---HHHH--HCSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESS-----CGGGBCHHHHHHHHHTT-CEEEEEESCCS
T ss_pred ---HHHh--hCCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECC-----CCcccCHHHHHHHHHcC-CCcEEEEecCC
Confidence 2332 589888764 34567677777666554433333 343 4667777776 35555554443
Q ss_pred C
Q 048078 198 R 198 (378)
Q Consensus 198 ~ 198 (378)
.
T Consensus 261 ~ 261 (313)
T 2ekl_A 261 N 261 (313)
T ss_dssp S
T ss_pred C
Confidence 3
No 462
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=20.17 E-value=2.8e+02 Score=22.47 Aligned_cols=58 Identities=12% Similarity=0.135 Sum_probs=33.0
Q ss_pred CceEEEEecCcch------HHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCC
Q 048078 49 KKPLVFLGSPQVS------VNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPA 114 (378)
Q Consensus 49 ~~rIvf~Gs~~~a------~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~ 114 (378)
+.-+++|...... .+.|+.+.+.......++++++|-.++.. .+..++++++++|++.
T Consensus 29 k~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d--------~~~~~~~~~~~~~~~~ 92 (170)
T 3me7_A 29 KPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKD--------TLEDIKRFQKEYGIDG 92 (170)
T ss_dssp SCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTC--------CHHHHHHHHHHTTCCS
T ss_pred CEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCC--------CHHHHHHHHHHcCCCC
Confidence 4556666554432 22344444433221235888888766411 2356899999999884
No 463
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=20.14 E-value=5.4e+02 Score=24.05 Aligned_cols=156 Identities=15% Similarity=0.173 Sum_probs=87.0
Q ss_pred CCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCcHH
Q 048078 48 RKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGEDA 127 (378)
Q Consensus 48 ~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~~~ 127 (378)
..++|+|+|.+.++..+.+.|... +++|.+ .++... ...+.+.|+. ... .
T Consensus 167 ~g~tvGIIG~G~IG~~vA~~l~~~------G~~V~~--~d~~~~------------~~~~~~~g~~---~~~----~--- 216 (347)
T 1mx3_A 167 RGETLGIIGLGRVGQAVALRAKAF------GFNVLF--YDPYLS------------DGVERALGLQ---RVS----T--- 216 (347)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTT------TCEEEE--ECTTSC------------TTHHHHHTCE---ECS----S---
T ss_pred CCCEEEEEeECHHHHHHHHHHHHC------CCEEEE--ECCCcc------------hhhHhhcCCe---ecC----C---
Confidence 356899999999999988887653 577643 333221 0223455664 211 1
Q ss_pred HHHHHHhcCCcEEEEec-----CCCcCChhhhcCCCCceEEEccCCCCCCCCc----hHHHHHHHcCCcEEEEEEEEecC
Q 048078 128 FLSNLRALQPELCITAA-----YGNILPSKFLNIPPMGTVNIHPSLLPLYRGA----APVQRALQGGAKETGVSLAFTVR 198 (378)
Q Consensus 128 ~~~~l~~~~~Dliv~~~-----~~~ilp~~il~~~~~g~iNiHpSlLP~yRG~----~pi~wai~~g~~~tGvTih~~~~ 198 (378)
+.+.++ +.|++++.- ...+|..+.++..+.+.+=+.-| ||. ..+..|+.+|. -.|+-+-....
T Consensus 217 l~ell~--~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~a-----rg~~vd~~aL~~aL~~g~-i~gA~lDV~~~ 288 (347)
T 1mx3_A 217 LQDLLF--HSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTA-----RGGLVDEKALAQALKEGR-IRGAALDVHES 288 (347)
T ss_dssp HHHHHH--HCSEEEECCCCCTTCTTSBSHHHHTTSCTTEEEEECS-----CTTSBCHHHHHHHHHHTS-EEEEEESCCSS
T ss_pred HHHHHh--cCCEEEEcCCCCHHHHHHhHHHHHhcCCCCCEEEECC-----CChHHhHHHHHHHHHhCC-CcEEEEeeccc
Confidence 123332 589988863 34578888888877765555444 554 56777887774 44443332222
Q ss_pred C--C-CCCCeeEEEEEEeCCCC--CHHHHHHHHHHHHHHHHHHHHHHhHcCC
Q 048078 199 A--L-DAGPVIAREKMEVDDQI--KAPELLVLLFSEGSELLIRELPSILDGS 245 (378)
Q Consensus 199 ~--~-D~G~Ii~Q~~~~I~~~d--t~~~L~~kl~~~~~~ll~~~l~~l~~g~ 245 (378)
+ . +..++.....+-+.|.. ...+...++.+... +.+..+.+|+
T Consensus 289 EP~~~~~~~L~~~~nvi~tPHia~~t~~~~~~~~~~~~----~ni~~~~~g~ 336 (347)
T 1mx3_A 289 EPFSFSQGPLKDAPNLICTPHAAWYSEQASIEMREEAA----REIRRAITGR 336 (347)
T ss_dssp SSCCTTSSTTTTCSSEEECSSCTTCCHHHHHHHHHHHH----HHHHHHHHSC
T ss_pred CCCCCCCchHHhCCCEEEEchHHHHHHHHHHHHHHHHH----HHHHHHHcCC
Confidence 2 2 23444443444444432 33455555555444 4455555665
No 464
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=20.08 E-value=1e+02 Score=27.86 Aligned_cols=33 Identities=18% Similarity=0.231 Sum_probs=22.7
Q ss_pred CceEEEEe-cCcchHHHHHHHHHccCCCCCCceEEEEE
Q 048078 49 KKPLVFLG-SPQVSVNVLDALFNASSSPDSIFEVAAIV 85 (378)
Q Consensus 49 ~~rIvf~G-s~~~a~~~L~~L~~~~~~~~~~~ei~~Vv 85 (378)
.|||++.| ++.++..+.+.|++.. .+++|+++.
T Consensus 3 ~m~vlVTGatG~iG~~l~~~L~~~g----~~~~V~~~~ 36 (336)
T 2hun_A 3 SMKLLVTGGMGFIGSNFIRYILEKH----PDWEVINID 36 (336)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHC----TTCEEEEEE
T ss_pred CCeEEEECCCchHHHHHHHHHHHhC----CCCEEEEEe
Confidence 47899999 4656667778888752 136776654
No 465
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=20.07 E-value=3.1e+02 Score=25.30 Aligned_cols=156 Identities=12% Similarity=0.061 Sum_probs=83.9
Q ss_pred CCCceEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCC-CCCCCCCCccCChHHHHHHHHCCCCCceecCCCCCCc
Q 048078 47 SRKKPLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQP-PSRRDRGRKVLPSPVAQYALDRGFPADLIFTPERAGE 125 (378)
Q Consensus 47 ~~~~rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~-~~~~grg~~~~~~~v~~~A~~~gIp~~~v~~~~~~~~ 125 (378)
-..++|+|+|.+.++....+.|... +++|.+ .++ ... . ..+.+.|+. +. + +
T Consensus 144 l~g~~vgIIG~G~IG~~~A~~l~~~------G~~V~~--~d~~~~~----------~--~~~~~~g~~---~~--~--~- 195 (320)
T 1gdh_A 144 LDNKTLGIYGFGSIGQALAKRAQGF------DMDIDY--FDTHRAS----------S--SDEASYQAT---FH--D--S- 195 (320)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTT------TCEEEE--ECSSCCC----------H--HHHHHHTCE---EC--S--S-
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHC------CCEEEE--ECCCCcC----------h--hhhhhcCcE---Ec--C--C-
Confidence 3456899999999999998888653 566542 233 221 1 245566765 31 1 1
Q ss_pred HHHHHHHHhcCCcEEEEec-----CCCcCChhhhcCCCCceEEEccCCCCCCCCc----hHHHHHHHcCCcEEEEEEEEe
Q 048078 126 DAFLSNLRALQPELCITAA-----YGNILPSKFLNIPPMGTVNIHPSLLPLYRGA----APVQRALQGGAKETGVSLAFT 196 (378)
Q Consensus 126 ~~~~~~l~~~~~Dliv~~~-----~~~ilp~~il~~~~~g~iNiHpSlLP~yRG~----~pi~wai~~g~~~tGvTih~~ 196 (378)
+.+.++ +.|+++++- ...+|.++.++..+.+.+-+--| ||. ..+..++.+|. -.|.-+-..
T Consensus 196 --l~ell~--~aDvVil~~p~~~~t~~~i~~~~l~~mk~gailIn~a-----rg~~vd~~aL~~aL~~g~-i~gA~lDv~ 265 (320)
T 1gdh_A 196 --LDSLLS--VSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTA-----RGDLVDNELVVAALEAGR-LAYAGFDVF 265 (320)
T ss_dssp --HHHHHH--HCSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEECS-----CGGGBCHHHHHHHHHHTS-EEEEEESCC
T ss_pred --HHHHHh--hCCEEEEeccCchHHHhhcCHHHHhhCCCCcEEEECC-----CCcccCHHHHHHHHHhCC-CcEEEEeCC
Confidence 123332 589988874 33567777877776664444333 452 46777887774 455444444
Q ss_pred cCCCCC-CCeeEEEEEEeCCCCCH--HHHHHHHHHHHHHHHHHHHHHhHcCC
Q 048078 197 VRALDA-GPVIAREKMEVDDQIKA--PELLVLLFSEGSELLIRELPSILDGS 245 (378)
Q Consensus 197 ~~~~D~-G~Ii~Q~~~~I~~~dt~--~~L~~kl~~~~~~ll~~~l~~l~~g~ 245 (378)
..+-.. -+.+....+-+-|.... .+-..++ .+++ +.+..+.+|+
T Consensus 266 ~~eP~~~~~L~~~~nviltPH~~~~t~~~~~~~----~~~~-~nl~~~~~g~ 312 (320)
T 1gdh_A 266 AGEPNINEGYYDLPNTFLFPHIGSAATQAREDM----AHQA-NDLIDALFGG 312 (320)
T ss_dssp TTTTSCCTTGGGCTTEEECSSCTTCBHHHHHHH----HHHH-HHHHHHHHTT
T ss_pred CCCCCCCChhhhCCCEEECCcCCcCcHHHHHHH----HHHH-HHHHHHHcCC
Confidence 333222 22332233444443321 2223333 3334 5555566665
No 466
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=20.07 E-value=2.7e+02 Score=24.49 Aligned_cols=30 Identities=17% Similarity=0.233 Sum_probs=19.7
Q ss_pred ceEEEEecC-cchHHHHHHHHHccCCCCCCceEEEEE
Q 048078 50 KPLVFLGSP-QVSVNVLDALFNASSSPDSIFEVAAIV 85 (378)
Q Consensus 50 ~rIvf~Gs~-~~a~~~L~~L~~~~~~~~~~~ei~~Vv 85 (378)
.+|++.|.. .++..+.+.|++. +++|+++.
T Consensus 33 k~vlVTGasggIG~~la~~l~~~------G~~V~~~~ 63 (279)
T 1xg5_A 33 RLALVTGASGGIGAAVARALVQQ------GLKVVGCA 63 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT------TCEEEEEE
T ss_pred CEEEEECCCchHHHHHHHHHHHC------CCEEEEEE
Confidence 468888754 4566677778774 57766543
No 467
>3uw1_A Ribose-5-phosphate isomerase A; ssgcid, seattle structural genomics center for infectious DI isomerase, ribose isomerase; HET: R5P; 1.71A {Burkholderia thailandensis} PDB: 3u7j_A*
Probab=20.04 E-value=69 Score=29.01 Aligned_cols=45 Identities=13% Similarity=0.151 Sum_probs=31.4
Q ss_pred eEEEEecCcchHHHHHHHHHccCCCCCCceEEEEEcCCCCCCCCCCccCChHHHHHHHHCCCC
Q 048078 51 PLVFLGSPQVSVNVLDALFNASSSPDSIFEVAAIVTQPPSRRDRGRKVLPSPVAQYALDRGFP 113 (378)
Q Consensus 51 rIvf~Gs~~~a~~~L~~L~~~~~~~~~~~ei~~Vvt~~~~~~grg~~~~~~~v~~~A~~~gIp 113 (378)
.++++||++-+...++.|-+.. .++.++||+.. ...+.|+++|||
T Consensus 34 ~vIGLGtGST~~~~i~~L~~~~------~~i~~~V~tS~------------~t~~~~~~~Gi~ 78 (239)
T 3uw1_A 34 AVIGVGTGSTANCFIDALAAVK------DRYRGAVSSSV------------ATTERLKSHGIR 78 (239)
T ss_dssp CEEEECCSHHHHHHHHHHHTTG------GGSCEEEESSH------------HHHHHHHHTTCC
T ss_pred CEEEECccHHHHHHHHHHHhhh------ccceEEeCCcH------------HHHHHHHHcCCc
Confidence 4889999976666777775431 23455676543 357889999999
No 468
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=20.01 E-value=1.4e+02 Score=26.67 Aligned_cols=22 Identities=18% Similarity=0.241 Sum_probs=14.7
Q ss_pred ceEEEEecC-cchHHHHHHHHHc
Q 048078 50 KPLVFLGSP-QVSVNVLDALFNA 71 (378)
Q Consensus 50 ~rIvf~Gs~-~~a~~~L~~L~~~ 71 (378)
.++++.|.. .++..+.+.|.+.
T Consensus 27 k~~lVTGas~gIG~aia~~la~~ 49 (271)
T 4ibo_A 27 RTALVTGSSRGLGRAMAEGLAVA 49 (271)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHT
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC
Confidence 466667744 4666777888875
Done!