BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 048084
         (967 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|1Z6T|A Chain A, Structure Of The Apoptotic Protease-activating Factor 1
           Bound To Adp
 pdb|1Z6T|B Chain B, Structure Of The Apoptotic Protease-activating Factor 1
           Bound To Adp
 pdb|1Z6T|C Chain C, Structure Of The Apoptotic Protease-activating Factor 1
           Bound To Adp
 pdb|1Z6T|D Chain D, Structure Of The Apoptotic Protease-activating Factor 1
           Bound To Adp
          Length = 591

 Score = 52.8 bits (125), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 80/353 (22%), Positives = 153/353 (43%), Gaps = 64/353 (18%)

Query: 186 KNDLVNRLICEGSKEQKGPRIISLVGMGGIGKTTLAQFAYNNGDV-KKYFDERI-WVCVS 243
           +  LVN +  + SK +  P  +++ GM G GK+ LA  A  +  + +  F   + WV V 
Sbjct: 129 RKKLVNAIQQKLSKLKGEPGWVTIHGMAGCGKSVLAAEAVRDHSLLEGCFPGGVHWVSVG 188

Query: 244 DPFDEFRIAKAIIEALTDSASNFGEFQSLMQRIQKHV--ARKKL-----------LLVLD 290
                 +    ++  L +  +   + +S  QR+  ++  A+ +L           LL+LD
Sbjct: 189 K-----QDKSGLLMKLQNLCTRLDQDESFSQRLPLNIEEAKDRLRILMLRKHPRSLLILD 243

Query: 291 DVWNENFYKWEQFNNCLKNCLHGSKILITTRKEAIA-RIMGSIDIISI-NVLSEIECWSV 348
           DVW+     W      LK      +IL+TTR +++   +MG   ++ + + L + +   +
Sbjct: 244 DVWDS----W-----VLKAFDSQCQILLTTRDKSVTDSVMGPKYVVPVESSLGKEKGLEI 294

Query: 349 FELLAFSGKSMEERENLEKIGREIVGKCKGLPLAAKTIASLLRSKNTR----------KE 398
             L     K+     +L +    I+ +CKG PL    I +LLR    R          K+
Sbjct: 295 LSLFVNMKKA-----DLPEQAHSIIKECKGSPLVVSLIGALLRDFPNRWEYYLKQLQNKQ 349

Query: 399 WQNILESEIWELEAVKKGLLAPLLLSYNELPSKVKHCFSYCAVFPKDYEMWKDKLIELWM 458
           ++ I +S  ++ EA+ +     + +S   L   +K  ++  ++  KD ++    L  LW 
Sbjct: 350 FKRIRKSSSYDYEALDEA----MSISVEMLREDIKDYYTDLSILQKDVKVPTKVLCILW- 404

Query: 459 AQGFLNNKRNKEMAEIGEEYFNVLASRSFFQDFGRGYDGEIYDCKMHDIVHDF 511
                 +   +E+ +I +E+ N       F D     +G+ +   +HD+  DF
Sbjct: 405 ------DMETEEVEDILQEFVN---KSLLFCD----RNGKSFRYYLHDLQVDF 444


>pdb|3IZA|A Chain A, Structure Of An Apoptosome-Procaspase-9 Card Complex
 pdb|3IZA|B Chain B, Structure Of An Apoptosome-Procaspase-9 Card Complex
 pdb|3IZA|C Chain C, Structure Of An Apoptosome-Procaspase-9 Card Complex
 pdb|3IZA|D Chain D, Structure Of An Apoptosome-Procaspase-9 Card Complex
 pdb|3IZA|E Chain E, Structure Of An Apoptosome-Procaspase-9 Card Complex
 pdb|3IZA|F Chain F, Structure Of An Apoptosome-Procaspase-9 Card Complex
 pdb|3IZA|G Chain G, Structure Of An Apoptosome-Procaspase-9 Card Complex
          Length = 1263

 Score = 49.3 bits (116), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 80/350 (22%), Positives = 152/350 (43%), Gaps = 64/350 (18%)

Query: 189 LVNRLICEGSKEQKGPRIISLVGMGGIGKTTLAQFAYNNGDV-KKYFDERI-WVCVSDPF 246
           LVN +  + SK +  P  +++ GM G GK+ LA  A  +  + +  F   + WV V    
Sbjct: 138 LVNAIQQKLSKLKGEPGWVTIHGMAGCGKSVLAAEAVRDHSLLEGCFPGGVHWVSVGK-- 195

Query: 247 DEFRIAKAIIEALTDSASNFGEFQSLMQRIQKHV--ARKKL-----------LLVLDDVW 293
              +    ++  L +  +   + +S  QR+  ++  A+ +L           LL+LDDVW
Sbjct: 196 ---QDKSGLLMKLQNLCTRLDQDESFSQRLPLNIEEAKDRLRILMLRKHPRSLLILDDVW 252

Query: 294 NENFYKWEQFNNCLKNCLHGSKILITTRKEAIA-RIMGSIDIISI-NVLSEIECWSVFEL 351
           +     W      LK      +IL+TTR +++   +MG   ++ + + L + +   +  L
Sbjct: 253 D----SW-----VLKAFDSQCQILLTTRDKSVTDSVMGPKYVVPVESSLGKEKGLEILSL 303

Query: 352 LAFSGKSMEERENLEKIGREIVGKCKGLPLAAKTIASLLRSKNTR----------KEWQN 401
                K+     +L +    I+ +CKG PL    I +LLR    R          K+++ 
Sbjct: 304 FVNMKKA-----DLPEQAHSIIKECKGSPLVVSLIGALLRDFPNRWEYYLKQLQNKQFKR 358

Query: 402 ILESEIWELEAVKKGLLAPLLLSYNELPSKVKHCFSYCAVFPKDYEMWKDKLIELWMAQG 461
           I +S  ++ EA+ +     + +S   L   +K  ++  ++  KD ++    L  LW    
Sbjct: 359 IRKSSSYDYEALDEA----MSISVEMLREDIKDYYTDLSILQKDVKVPTKVLCILW---- 410

Query: 462 FLNNKRNKEMAEIGEEYFNVLASRSFFQDFGRGYDGEIYDCKMHDIVHDF 511
              +   +E+ +I +E+ N       F D     +G+ +   +HD+  DF
Sbjct: 411 ---DMETEEVEDILQEFVN---KSLLFCD----RNGKSFRYYLHDLQVDF 450


>pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1
          Length = 1249

 Score = 47.8 bits (112), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 70/305 (22%), Positives = 131/305 (42%), Gaps = 59/305 (19%)

Query: 204 PRIISLVGMGGIGKTTLAQFAYNNGDVKKYFDERIWVCVSDPFDEFRIAK----AIIEAL 259
           P  +++ GM G GK+ LA  A  +  + +        C S       I K     ++  L
Sbjct: 147 PGWVTIYGMAGCGKSVLAAEAVRDHSLLE-------GCFSGGVHWVSIGKQDKSGLLMKL 199

Query: 260 TDSASNFGEFQSLMQRIQKHV--ARKKL-----------LLVLDDVWNENFYKWEQFNNC 306
            +      + +S  QR+  ++  A+ +L           LL+LDDVW+    K   F+N 
Sbjct: 200 QNLCMRLDQEESFSQRLPLNIEEAKDRLRVLMLRKHPRSLLILDDVWDPWVLK--AFDN- 256

Query: 307 LKNCLHGSKILITTRKEAIA-RIMGSIDIISINVLSEIECWSVFELLAFSGKSMEERENL 365
              C    +IL+TTR +++   +MG   ++ +   S +      E+L+       ++E+L
Sbjct: 257 --QC----QILLTTRDKSVTDSVMGPKHVVPVE--SGLGREKGLEILSLFVNM--KKEDL 306

Query: 366 EKIGREIVGKCKGLPLAAKTIASLLRSKNTR----------KEWQNILESEIWELEAVKK 415
                 I+ +CKG PL    I +LLR    R          K+++ I +S  ++ EA+ +
Sbjct: 307 PAEAHSIIKECKGSPLVVSLIGALLRDFPNRWAYYLRQLQNKQFKRIRKSSSYDYEALDE 366

Query: 416 GLLAPLLLSYNELPSKVKHCFSYCAVFPKDYEMWKDKLIELWMAQGFLNNKRNKEMAEIG 475
                + +S   L   +K  ++  ++  KD ++    L  LW       +   +E+ +I 
Sbjct: 367 A----MSISVEMLREDIKDYYTDLSILQKDVKVPTKVLCVLW-------DLETEEVEDIL 415

Query: 476 EEYFN 480
           +E+ N
Sbjct: 416 QEFVN 420


>pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length
           Murine Apaf-1
          Length = 1256

 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 69/305 (22%), Positives = 130/305 (42%), Gaps = 59/305 (19%)

Query: 204 PRIISLVGMGGIGKTTLAQFAYNNGDVKKYFDERIWVCVSDPFDEFRIAK----AIIEAL 259
           P  +++ GM G GK+ LA  A  +  +       +  C S       I K     ++  L
Sbjct: 154 PGWVTIYGMAGCGKSVLAAEAVRDHSL-------LEGCFSGGVHWVSIGKQDKSGLLMKL 206

Query: 260 TDSASNFGEFQSLMQRIQKHV--ARKKL-----------LLVLDDVWNENFYKWEQFNNC 306
            +      + +S  QR+  ++  A+ +L           LL+LDDVW+    K   F+N 
Sbjct: 207 QNLCMRLDQEESFSQRLPLNIEEAKDRLRVLMLRKHPRSLLILDDVWDPWVLK--AFDN- 263

Query: 307 LKNCLHGSKILITTRKEAIA-RIMGSIDIISINVLSEIECWSVFELLAFSGKSMEERENL 365
              C    +IL+TT  +++   +MG   ++ +   S +      E+L+       ++E+L
Sbjct: 264 --QC----QILLTTSDKSVTDSVMGPKHVVPVE--SGLGREKGLEILSLFVNM--KKEDL 313

Query: 366 EKIGREIVGKCKGLPLAAKTIASLLRSKNTR----------KEWQNILESEIWELEAVKK 415
                 I+ +CKG PL    I +LLR    R          K+++ I +S  ++ EA+ +
Sbjct: 314 PAEAHSIIKECKGSPLVVSLIGALLRDFPNRWAYYLRQLQNKQFKRIRKSSSYDYEALDE 373

Query: 416 GLLAPLLLSYNELPSKVKHCFSYCAVFPKDYEMWKDKLIELWMAQGFLNNKRNKEMAEIG 475
                + +S   L   +K  ++  ++  KD ++    L  LW       +   +E+ +I 
Sbjct: 374 A----MSISVEMLREDIKDYYTDLSILQKDVKVPTKVLCVLW-------DLETEEVEDIL 422

Query: 476 EEYFN 480
           +E+ N
Sbjct: 423 QEFVN 427


>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
           Rbc36 In Complex With H-Trisaccharide
          Length = 229

 Score = 37.4 bits (85), Expect = 0.038,   Method: Composition-based stats.
 Identities = 39/131 (29%), Positives = 65/131 (49%), Gaps = 15/131 (11%)

Query: 586 PQLFDKLICLRALKLEVRGWRSCENYIKEIPTNI-EKLLHLKYLNLFCQREIEKLPETLC 644
           P +FD LI L+ L L         N +  +P  + + L  L  L+L    ++  LP  + 
Sbjct: 57  PGVFDSLINLKELYLG-------SNQLGALPVGVFDSLTQLTVLDL-GTNQLTVLPSAVF 108

Query: 645 E-LYNLERLNVSGCRNLRELPQGIGKLRKLMYLYNDRTESLRYLPVGIEELIRLRGVTK- 702
           + L +L+ L +  C  L ELP+GI +L  L +L  D+ + L+ +P G  +  RL  +T  
Sbjct: 109 DRLVHLKELFMC-CNKLTELPRGIERLTHLTHLALDQNQ-LKSIPHGAFD--RLSSLTHA 164

Query: 703 FVVGGGYDRAC 713
           ++ G  +D  C
Sbjct: 165 YLFGNPWDCEC 175



 Score = 35.0 bits (79), Expect = 0.22,   Method: Composition-based stats.
 Identities = 28/98 (28%), Positives = 53/98 (54%), Gaps = 16/98 (16%)

Query: 544 LMLALDRGALIPMPIWDNVKGLRGLRSLLVESNEYSWSRVILPQ-LFDKLICLRALKLEV 602
           L L  ++   +P+ ++D+   L  L  L + +N+ +    +LP  +FD+L+ L+ L +  
Sbjct: 69  LYLGSNQLGALPVGVFDS---LTQLTVLDLGTNQLT----VLPSAVFDRLVHLKELFM-- 119

Query: 603 RGWRSCENYIKEIPTNIEKLLHLKYLNLFCQREIEKLP 640
                C N + E+P  IE+L HL +L L  Q +++ +P
Sbjct: 120 -----CCNKLTELPRGIERLTHLTHLAL-DQNQLKSIP 151


>pdb|4FCG|A Chain A, Structure Of The Leucine-Rich Repeat Domain Of The Type
           Iii Effector Xcv3220 (Xopl)
          Length = 328

 Score = 35.8 bits (81), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 48/106 (45%), Gaps = 8/106 (7%)

Query: 592 LICLRALKLEVRGWRSCENYIKEIPTNIEKLLHLKYLNLFCQREIEKLPETLCELYNLER 651
           L+ L++L+LE  G RS       +P +I  L +LK L +     +  L   +  L  LE 
Sbjct: 182 LVNLQSLRLEWTGIRS-------LPASIANLQNLKSLKIR-NSPLSALGPAIHHLPKLEE 233

Query: 652 LNVSGCRNLRELPQGIGKLRKLMYLYNDRTESLRYLPVGIEELIRL 697
           L++ GC  LR  P   G    L  L      +L  LP+ I  L +L
Sbjct: 234 LDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQL 279


>pdb|4ARN|A Chain A, Crystal Structure Of The N-terminal Domain Of Drosophila
           Toll Receptor
 pdb|4ARN|B Chain B, Crystal Structure Of The N-terminal Domain Of Drosophila
           Toll Receptor
 pdb|4ARN|C Chain C, Crystal Structure Of The N-terminal Domain Of Drosophila
           Toll Receptor
 pdb|4ARN|D Chain D, Crystal Structure Of The N-terminal Domain Of Drosophila
           Toll Receptor
 pdb|4ARR|A Chain A, Crystal Structure Of The N-terminal Domain Of Drosophila
           Toll Receptor With The Magic Triangle I3c
 pdb|4ARR|B Chain B, Crystal Structure Of The N-terminal Domain Of Drosophila
           Toll Receptor With The Magic Triangle I3c
          Length = 279

 Score = 35.0 bits (79), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 36/171 (21%)

Query: 564 GLRGLRSLLVESNEYSWSRVILPQLFDKLICLRALKLEVRGWRSCENYIKEIPTNI-EKL 622
           G+    +L+ ES+    +  I  Q  D+L  L+  +   R        +  IP N+   +
Sbjct: 96  GIVSPTTLIFESDNLGMN--ITRQHLDRLHGLKRFRFTTR-------RLTHIPANLLTDM 146

Query: 623 LHLKYLNLFCQREIEKLPETLCE-LYNLERLNVSGCRNLRELPQGI-GKLRKLMYLYNDR 680
            +L +L L  +  IE++P  L + L NLE +   G   LR++P+GI GK+ KL  L N  
Sbjct: 147 RNLSHLEL--RANIEEMPSHLFDDLENLESIEF-GSNKLRQMPRGIFGKMPKLKQL-NLA 202

Query: 681 TESLRYLPVGIEELIRLRGVTKFVVGGGYDRACSLGSLKKLNLLRECWICG 731
           +  L+ +P GI                 +DR   L SL+K+ L    W C 
Sbjct: 203 SNQLKSVPDGI-----------------FDR---LTSLQKIWLHTNPWDCS 233


>pdb|3S1S|A Chain A, Characterization And Crystal Structure Of The Type Iig
           Restriction Endonuclease Bpusi
          Length = 878

 Score = 34.7 bits (78), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 2/62 (3%)

Query: 385 TIASLLRSKNTRKEWQNILESEIWELEAVKKGLLAPLLLSYNELPSKVKHCFSYCAVFPK 444
           T+++   +   R+ W N +E+   EL +++ GLL P L+S N  P+        C++ P+
Sbjct: 338 TVSAGFNNVXPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGE--DVCSLNPE 395

Query: 445 DY 446
           D+
Sbjct: 396 DF 397


>pdb|3QFL|A Chain A, Coiled-Coil Domain-Dependent Homodimerization Of
           Intracellular Mla Immune Receptors Defines A Minimal
           Functional Module For Triggering Cell Death
          Length = 115

 Score = 33.9 bits (76), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 15/102 (14%)

Query: 4   AIISPLLDQLISVAVEEAKEQVRLVTGVGKEVKKLTSTLRAIQAVL---HDAEKRQVKEE 60
           A IS L+ +L  +  EE K    L  GV K ++ L   L +  A L    +  + Q+  +
Sbjct: 1   AAISNLIPKLGELLTEEFK----LHKGVKKNIEDLGKELESXNAALIKIGEVPREQLDSQ 56

Query: 61  TVRLWLDQLRDACYDMEDVLGEWNTARLKLQIDGV--DDHQN 100
             +LW D++R+  Y +EDV+      +  +Q+DG+  DD+ N
Sbjct: 57  D-KLWADEVRELSYVIEDVVD-----KFLVQVDGIKSDDNNN 92


>pdb|3G06|A Chain A, The Salmonella Virulence Effector Ssph2 Functions As A
           Novel E3 Ligase
          Length = 622

 Score = 32.3 bits (72), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 16/74 (21%)

Query: 636 IEKLPETLCEL--YN------------LERLNVSGCRNLRELPQGIGKLRKLMYLYNDRT 681
           +  LP  LC+L  YN            L+ L+VS    L  LP    +L KL + YN+R 
Sbjct: 156 LPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSD-NQLASLPTLPSELYKL-WAYNNRL 213

Query: 682 ESLRYLPVGIEELI 695
            SL  LP G++ELI
Sbjct: 214 TSLPALPSGLKELI 227


>pdb|2A5Y|B Chain B, Structure Of A Ced-4CED-9 Complex
 pdb|2A5Y|C Chain C, Structure Of A Ced-4CED-9 Complex
 pdb|3LQQ|A Chain A, Structure Of The Ced-4 Apoptosome
 pdb|3LQQ|B Chain B, Structure Of The Ced-4 Apoptosome
 pdb|3LQR|A Chain A, Structure Of Ced-4:ced-3 Complex
 pdb|3LQR|B Chain B, Structure Of Ced-4:ced-3 Complex
          Length = 549

 Score = 32.0 bits (71), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 64/170 (37%), Gaps = 21/170 (12%)

Query: 209 LVGMGGIGKTTLAQFAYNNGD--VKKYFDERIWV--CVSDPFDEFRIAKAIIEALT--DS 262
           L G  G GK+ +A  A +  D  +   +D  +W+    + P   F +   I+  L   D 
Sbjct: 157 LHGRAGSGKSVIASQALSKSDQLIGINYDSIVWLKDSGTAPKSTFDLFTDILLMLKSEDD 216

Query: 263 ASNFGEFQSLMQRIQKH------VARKKLLLVLDDVWNENFYKWEQFNNCLKNCLHGSKI 316
             NF   + +   + K       + R   L V DDV  E   +W Q            + 
Sbjct: 217 LLNFPSVEHVTSVVLKRMICNALIDRPNTLFVFDDVVQEETIRWAQELRL--------RC 268

Query: 317 LITTRKEAIARIMG-SIDIISINVLSEIECWSVFELLAFSGKSMEERENL 365
           L+TTR   I+     + + I +  L   EC+   E         E+ E++
Sbjct: 269 LVTTRDVEISNAASQTCEFIEVTSLEIDECYDFLEAYGMPMPVGEKEEDV 318


>pdb|1X18|E Chain E, Contact Sites Of Era Gtpase On The Thermus Thermophilus
           30s Subunit
          Length = 231

 Score = 30.8 bits (68), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 3/53 (5%)

Query: 618 NIEKLLHLKYLN-LFCQREIEKLPETLCELYNLERLN--VSGCRNLRELPQGI 667
            I+++  L+ L  LF   EIE+ P+    L+ LERL   +SG R L+ LP  I
Sbjct: 101 TIQRVHRLEELEALFASPEIEERPKKEQRLHELERLQKYLSGFRLLKRLPDAI 153


>pdb|1M93|B Chain B, 1.65 A Structure Of Cleaved Viral Serpin Crma
          Length = 245

 Score = 30.0 bits (66), Expect = 5.9,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 8/82 (9%)

Query: 506 DIVHDFAQYLCSNECLTVEIHS--GEEL----AMSSFGEKKILHLMLALDRGALIPMPIW 559
           +   D+  Y+   E + V + S  GE         SFG   I+ L    D   ++ +P  
Sbjct: 89  EFTSDYPFYVSPTEMVDVSMMSMYGEAFNHASVKESFGNFSIIELPYVGDTSMVVILP-- 146

Query: 560 DNVKGLRGLRSLLVESNEYSWS 581
           DN+ GL  +   L ++N   WS
Sbjct: 147 DNIDGLESIEQNLTDTNFKKWS 168


>pdb|1C8O|A Chain A, 2.9 A Structure Of Cleaved Viral Serpin Crma
          Length = 300

 Score = 30.0 bits (66), Expect = 5.9,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 8/82 (9%)

Query: 506 DIVHDFAQYLCSNECLTVEIHS--GEEL----AMSSFGEKKILHLMLALDRGALIPMPIW 559
           +   D+  Y+   E + V + S  GE         SFG   I+ L    D   ++ +P  
Sbjct: 144 EFTSDYPFYVSPTEMVDVSMMSMYGEAFNHASVKESFGNFSIIELPYVGDTSMVVILP-- 201

Query: 560 DNVKGLRGLRSLLVESNEYSWS 581
           DN+ GL  +   L ++N   WS
Sbjct: 202 DNIDGLESIEQNLTDTNFKKWS 223


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.321    0.139    0.416 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,446,408
Number of Sequences: 62578
Number of extensions: 1200305
Number of successful extensions: 2953
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 2931
Number of HSP's gapped (non-prelim): 28
length of query: 967
length of database: 14,973,337
effective HSP length: 108
effective length of query: 859
effective length of database: 8,214,913
effective search space: 7056610267
effective search space used: 7056610267
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)