Query 048085
Match_columns 341
No_of_seqs 206 out of 1264
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 10:22:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048085.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048085hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ys8_A RAB-related GTP-binding 99.6 1.2E-16 4.1E-21 127.6 6.0 62 277-341 16-77 (90)
2 2dn9_A DNAJ homolog subfamily 99.6 1.2E-15 4.1E-20 118.0 5.7 53 287-341 6-58 (79)
3 2qwo_B Putative tyrosine-prote 99.6 6.1E-16 2.1E-20 125.4 2.8 57 283-341 27-87 (92)
4 2yua_A Williams-beuren syndrom 99.6 2.3E-15 7.7E-20 121.8 5.1 52 288-341 17-68 (99)
5 2ctq_A DNAJ homolog subfamily 99.5 3.9E-15 1.3E-19 123.0 5.7 52 288-341 20-71 (112)
6 1bq0_A DNAJ, HSP40; chaperone, 99.5 4.6E-15 1.6E-19 120.6 5.8 52 288-341 3-54 (103)
7 1iur_A KIAA0730 protein; DNAJ 99.5 1.7E-15 5.9E-20 121.3 3.2 51 289-341 17-68 (88)
8 1hdj_A Human HSP40, HDJ-1; mol 99.5 5.8E-15 2E-19 113.7 5.4 51 288-341 3-53 (77)
9 2ctr_A DNAJ homolog subfamily 99.5 6.1E-15 2.1E-19 116.8 5.6 52 287-341 6-57 (88)
10 2ctw_A DNAJ homolog subfamily 99.5 6.1E-15 2.1E-19 121.5 5.6 52 288-341 17-68 (109)
11 2cug_A Mkiaa0962 protein; DNAJ 99.5 7.5E-15 2.6E-19 116.3 5.5 51 288-341 17-67 (88)
12 2ctp_A DNAJ homolog subfamily 99.5 6.4E-15 2.2E-19 113.8 5.0 52 287-341 6-57 (78)
13 1wjz_A 1700030A21RIK protein; 99.5 4.7E-15 1.6E-19 117.9 4.1 53 287-341 15-73 (94)
14 2ej7_A HCG3 gene; HCG3 protein 99.5 8.6E-15 2.9E-19 113.9 5.2 52 288-341 9-61 (82)
15 2dmx_A DNAJ homolog subfamily 99.5 1.2E-14 4.2E-19 115.6 4.5 52 288-341 9-61 (92)
16 2lgw_A DNAJ homolog subfamily 99.5 3.2E-14 1.1E-18 115.7 5.8 52 288-341 2-54 (99)
17 2och_A Hypothetical protein DN 99.5 3.5E-14 1.2E-18 108.5 5.5 51 286-341 6-56 (73)
18 2o37_A Protein SIS1; HSP40, J- 99.4 5.5E-14 1.9E-18 112.3 4.8 51 286-341 6-56 (92)
19 2qsa_A DNAJ homolog DNJ-2; J-d 99.4 4.9E-14 1.7E-18 115.5 3.7 53 287-341 14-70 (109)
20 3ag7_A Putative uncharacterize 99.4 4.3E-14 1.5E-18 116.7 1.1 52 287-341 40-98 (106)
21 1faf_A Large T antigen; J doma 99.4 2E-13 7E-18 106.7 3.8 49 289-341 12-60 (79)
22 2l6l_A DNAJ homolog subfamily 99.4 4.2E-13 1.4E-17 116.1 5.2 53 287-341 9-67 (155)
23 2guz_A Mitochondrial import in 99.4 3E-13 1E-17 103.6 3.8 47 289-341 15-62 (71)
24 1n4c_A Auxilin; four helix bun 99.4 3.3E-13 1.1E-17 121.5 4.3 52 288-341 117-171 (182)
25 3lz8_A Putative chaperone DNAJ 99.3 1.4E-13 4.8E-18 133.2 0.0 53 286-341 26-78 (329)
26 1gh6_A Large T antigen; tumor 99.3 3.1E-13 1.1E-17 113.0 0.5 48 288-341 8-57 (114)
27 3bvo_A CO-chaperone protein HS 99.3 2.8E-12 9.4E-17 117.0 4.9 55 287-341 42-101 (207)
28 2pf4_E Small T antigen; PP2A, 99.1 4.1E-12 1.4E-16 113.6 0.4 48 288-341 11-60 (174)
29 3apo_A DNAJ homolog subfamily 99.1 7.8E-12 2.7E-16 129.9 0.1 53 287-341 20-72 (780)
30 3uo3_A J-type CO-chaperone JAC 99.1 2.6E-11 9E-16 108.5 2.0 51 287-341 10-66 (181)
31 2guz_B Mitochondrial import in 98.2 5.1E-07 1.7E-11 68.7 3.0 48 289-340 5-53 (65)
32 2y4t_A DNAJ homolog subfamily 98.2 7.3E-07 2.5E-11 82.5 4.4 54 286-341 380-436 (450)
33 2pzi_A Probable serine/threoni 78.1 0.99 3.4E-05 46.1 2.6 44 287-340 628-673 (681)
34 3j1r_A Archaeal adhesion filam 23.5 68 0.0023 20.1 2.7 16 101-116 7-22 (26)
No 1
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.65 E-value=1.2e-16 Score=127.57 Aligned_cols=62 Identities=34% Similarity=0.553 Sum_probs=56.2
Q ss_pred chHHHHHhhccCCchhhcCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCChhHHHHHHHHHhhhC
Q 048085 277 SNDEMKRIINCMDHYETLGFPRHKKIDAAVLKKEYRKKAMLVHPDKNMGSPLASESFKKLQCAYE 341 (341)
Q Consensus 277 s~~ei~ril~~~d~YeVLGV~~~~~as~~eIKkAYRkLALk~HPDKn~g~~~A~E~Fk~L~~AYE 341 (341)
..+.+.++....|+|++|||+++ ++.+|||++||+++++|||||++ +++++++|++|++|||
T Consensus 16 ~~~~~~~~~~~~~~y~iLgv~~~--as~~eIk~aYr~la~~~HPDk~~-~~~~~~~f~~i~~Ay~ 77 (90)
T 2ys8_A 16 QADAIRRIRNSKDSWDMLGVKPG--ASRDEVNKAYRKLAVLLHPDKCV-APGSEDAFKAVVNART 77 (90)
T ss_dssp HHHHHHHHHTCSSHHHHHTCCTT--CCHHHHHHHHHHHHHHHCTTTCC-CTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCHHHHcCcCCC--CCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHH
Confidence 34556677788999999999999 99999999999999999999998 6789999999999996
No 2
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.58 E-value=1.2e-15 Score=117.96 Aligned_cols=53 Identities=42% Similarity=0.617 Sum_probs=50.5
Q ss_pred cCCchhhcCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCChhHHHHHHHHHhhhC
Q 048085 287 CMDHYETLGFPRHKKIDAAVLKKEYRKKAMLVHPDKNMGSPLASESFKKLQCAYE 341 (341)
Q Consensus 287 ~~d~YeVLGV~~~~~as~~eIKkAYRkLALk~HPDKn~g~~~A~E~Fk~L~~AYE 341 (341)
..|+|++|||+++ ++.++||++||++++++||||++++++++++|++|++||+
T Consensus 6 ~~~~y~iLgv~~~--a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~ 58 (79)
T 2dn9_A 6 SGDYYQILGVPRN--ASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYE 58 (79)
T ss_dssp CSCHHHHHTCCTT--CCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHH
T ss_pred CCCHHHHcCCCCC--CCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHH
Confidence 4689999999999 9999999999999999999999988899999999999995
No 3
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.57 E-value=6.1e-16 Score=125.38 Aligned_cols=57 Identities=28% Similarity=0.510 Sum_probs=51.1
Q ss_pred Hhhcc-CCchhhcCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCh---hHHHHHHHHHhhhC
Q 048085 283 RIINC-MDHYETLGFPRHKKIDAAVLKKEYRKKAMLVHPDKNMGSP---LASESFKKLQCAYE 341 (341)
Q Consensus 283 ril~~-~d~YeVLGV~~~~~as~~eIKkAYRkLALk~HPDKn~g~~---~A~E~Fk~L~~AYE 341 (341)
+++.. .++|++||+++. ++.+|||+|||+++++||||||++++ .|+++|+.|++|||
T Consensus 27 ~~L~~~~~~y~~Lgv~~~--as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAye 87 (92)
T 2qwo_B 27 TVLWAGETKWKPVGMADL--VTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWS 87 (92)
T ss_dssp GTSCTTCCSCCCCCGGGS--SSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHH
T ss_pred HHhcccccCCeecCCCCC--CCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHH
Confidence 44444 489999999999 99999999999999999999999775 38999999999996
No 4
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.55 E-value=2.3e-15 Score=121.82 Aligned_cols=52 Identities=37% Similarity=0.643 Sum_probs=50.0
Q ss_pred CCchhhcCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCChhHHHHHHHHHhhhC
Q 048085 288 MDHYETLGFPRHKKIDAAVLKKEYRKKAMLVHPDKNMGSPLASESFKKLQCAYE 341 (341)
Q Consensus 288 ~d~YeVLGV~~~~~as~~eIKkAYRkLALk~HPDKn~g~~~A~E~Fk~L~~AYE 341 (341)
.|+|++|||+++ ++.+|||++||+++++|||||++++++++++|++|++|||
T Consensus 17 ~~~Y~vLgv~~~--as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~ 68 (99)
T 2yua_A 17 TALYDLLGVPST--ATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYV 68 (99)
T ss_dssp SHHHHHHTCCTT--CCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHH
T ss_pred cCHHHHcCCCCC--CCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHH
Confidence 489999999999 9999999999999999999999988899999999999996
No 5
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.54 E-value=3.9e-15 Score=123.04 Aligned_cols=52 Identities=37% Similarity=0.506 Sum_probs=50.2
Q ss_pred CCchhhcCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCChhHHHHHHHHHhhhC
Q 048085 288 MDHYETLGFPRHKKIDAAVLKKEYRKKAMLVHPDKNMGSPLASESFKKLQCAYE 341 (341)
Q Consensus 288 ~d~YeVLGV~~~~~as~~eIKkAYRkLALk~HPDKn~g~~~A~E~Fk~L~~AYE 341 (341)
.|||++|||+++ ++.+|||+|||++++++||||++++++|+++|++|++||+
T Consensus 20 ~d~Y~iLgv~~~--as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~ 71 (112)
T 2ctq_A 20 EDYYTLLGCDEL--SSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKE 71 (112)
T ss_dssp CCHHHHTTCCTT--SCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHH
T ss_pred CCHHHHcCCCCC--CCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHH
Confidence 599999999999 9999999999999999999999988899999999999996
No 6
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.54 E-value=4.6e-15 Score=120.64 Aligned_cols=52 Identities=38% Similarity=0.675 Sum_probs=50.0
Q ss_pred CCchhhcCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCChhHHHHHHHHHhhhC
Q 048085 288 MDHYETLGFPRHKKIDAAVLKKEYRKKAMLVHPDKNMGSPLASESFKKLQCAYE 341 (341)
Q Consensus 288 ~d~YeVLGV~~~~~as~~eIKkAYRkLALk~HPDKn~g~~~A~E~Fk~L~~AYE 341 (341)
.|+|++|||+++ ++.+|||++||++++++||||++++++++++|++|++|||
T Consensus 3 ~~~y~iLgv~~~--as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~ 54 (103)
T 1bq0_A 3 QDYYEILGVSKT--AEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYE 54 (103)
T ss_dssp CCSTTTTSSCSS--CCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTT
T ss_pred CCHHHHcCcCCC--CCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHH
Confidence 589999999999 9999999999999999999999987899999999999997
No 7
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.54 E-value=1.7e-15 Score=121.31 Aligned_cols=51 Identities=27% Similarity=0.305 Sum_probs=48.1
Q ss_pred CchhhcCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCh-hHHHHHHHHHhhhC
Q 048085 289 DHYETLGFPRHKKIDAAVLKKEYRKKAMLVHPDKNMGSP-LASESFKKLQCAYE 341 (341)
Q Consensus 289 d~YeVLGV~~~~~as~~eIKkAYRkLALk~HPDKn~g~~-~A~E~Fk~L~~AYE 341 (341)
++|++|||+++ ++.+|||+|||+++++|||||+++++ +|+++|++|++|||
T Consensus 17 ~~y~vLgv~~~--as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYe 68 (88)
T 1iur_A 17 EVTSVVEQAWK--LPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEIN 68 (88)
T ss_dssp HHHHHHHHTTS--SCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCC--CCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHH
Confidence 79999999999 99999999999999999999999774 58999999999996
No 8
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.53 E-value=5.8e-15 Score=113.73 Aligned_cols=51 Identities=43% Similarity=0.729 Sum_probs=48.4
Q ss_pred CCchhhcCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCChhHHHHHHHHHhhhC
Q 048085 288 MDHYETLGFPRHKKIDAAVLKKEYRKKAMLVHPDKNMGSPLASESFKKLQCAYE 341 (341)
Q Consensus 288 ~d~YeVLGV~~~~~as~~eIKkAYRkLALk~HPDKn~g~~~A~E~Fk~L~~AYE 341 (341)
.|+|++|||+++ ++.++||++||++++++||||++ ++++++.|++|++|||
T Consensus 3 ~~~y~iLgv~~~--as~~~Ik~ayr~l~~~~HPD~~~-~~~~~~~f~~i~~Ay~ 53 (77)
T 1hdj_A 3 KDYYQTLGLARG--ASDEEIKRAYRRQALRYHPDKNK-EPGAEEKFKEIAEAYD 53 (77)
T ss_dssp CCSHHHHTCCTT--CCHHHHHHHHHHHHHTTCTTTCC-CTTHHHHHHHHHHHHH
T ss_pred CCHHHHcCCCCC--CCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHH
Confidence 589999999999 99999999999999999999997 6789999999999996
No 9
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.53 E-value=6.1e-15 Score=116.78 Aligned_cols=52 Identities=40% Similarity=0.637 Sum_probs=49.3
Q ss_pred cCCchhhcCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCChhHHHHHHHHHhhhC
Q 048085 287 CMDHYETLGFPRHKKIDAAVLKKEYRKKAMLVHPDKNMGSPLASESFKKLQCAYE 341 (341)
Q Consensus 287 ~~d~YeVLGV~~~~~as~~eIKkAYRkLALk~HPDKn~g~~~A~E~Fk~L~~AYE 341 (341)
..|+|++|||+++ ++.+|||++||++++++||||++ +++++++|++|++|||
T Consensus 6 ~~~~y~iLgv~~~--as~~eIk~ayr~l~~~~HPDk~~-~~~a~~~f~~i~~Ay~ 57 (88)
T 2ctr_A 6 SGSYYDILGVPKS--ASERQIKKAFHKLAMKYHPDKNK-SPDAEAKFREIAEAYE 57 (88)
T ss_dssp CCSHHHHHTCCTT--CCHHHHHHHHHHHHHHTCTTTCC-SHHHHHHHHHHHHHHH
T ss_pred CCCHHHHcCcCCC--CCHHHHHHHHHHHHHHHCcCCCC-ChHHHHHHHHHHHHHH
Confidence 4589999999999 99999999999999999999998 7889999999999996
No 10
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.53 E-value=6.1e-15 Score=121.49 Aligned_cols=52 Identities=37% Similarity=0.584 Sum_probs=50.0
Q ss_pred CCchhhcCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCChhHHHHHHHHHhhhC
Q 048085 288 MDHYETLGFPRHKKIDAAVLKKEYRKKAMLVHPDKNMGSPLASESFKKLQCAYE 341 (341)
Q Consensus 288 ~d~YeVLGV~~~~~as~~eIKkAYRkLALk~HPDKn~g~~~A~E~Fk~L~~AYE 341 (341)
.|+|++|||+++ ++.+|||++||++++++||||++++++|+++|++|++||+
T Consensus 17 ~~~Y~vLgv~~~--as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~ 68 (109)
T 2ctw_A 17 ESLYHVLGLDKN--ATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHA 68 (109)
T ss_dssp CCHHHHHTCCTT--CCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHH
T ss_pred CCHHHHcCcCCC--CCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHH
Confidence 589999999999 9999999999999999999999988899999999999996
No 11
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.52 E-value=7.5e-15 Score=116.27 Aligned_cols=51 Identities=43% Similarity=0.635 Sum_probs=48.5
Q ss_pred CCchhhcCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCChhHHHHHHHHHhhhC
Q 048085 288 MDHYETLGFPRHKKIDAAVLKKEYRKKAMLVHPDKNMGSPLASESFKKLQCAYE 341 (341)
Q Consensus 288 ~d~YeVLGV~~~~~as~~eIKkAYRkLALk~HPDKn~g~~~A~E~Fk~L~~AYE 341 (341)
.|+|++|||+++ ++.+|||++||++++++||||++ ++.++++|++|++||+
T Consensus 17 ~d~y~iLgv~~~--as~~eIk~ayr~l~~~~HPDk~~-~~~~~~~f~~i~~Ay~ 67 (88)
T 2cug_A 17 FDPYRVLGVSRT--ASQADIKKAYKKLAREWHPDKNK-DPGAEDRFIQISKAYE 67 (88)
T ss_dssp SCHHHHHTCCTT--CCHHHHHHHHHHHHHHSCTTTCC-STTHHHHHHHHHHHHH
T ss_pred CCHHHHcCcCCC--CCHHHHHHHHHHHHHHHCcCCCC-ChhHHHHHHHHHHHHH
Confidence 599999999999 99999999999999999999998 5789999999999995
No 12
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.52 E-value=6.4e-15 Score=113.77 Aligned_cols=52 Identities=46% Similarity=0.678 Sum_probs=49.1
Q ss_pred cCCchhhcCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCChhHHHHHHHHHhhhC
Q 048085 287 CMDHYETLGFPRHKKIDAAVLKKEYRKKAMLVHPDKNMGSPLASESFKKLQCAYE 341 (341)
Q Consensus 287 ~~d~YeVLGV~~~~~as~~eIKkAYRkLALk~HPDKn~g~~~A~E~Fk~L~~AYE 341 (341)
..|+|++|||+++ ++.++||++||++++++||||++ ++++++.|++|++||+
T Consensus 6 ~~~~y~iLgv~~~--as~~eIk~ayr~l~~~~HPDk~~-~~~~~~~f~~i~~Ay~ 57 (78)
T 2ctp_A 6 SGDYYEILGVSRG--ASDEDLKKAYRRLALKFHPDKNH-APGATEAFKAIGTAYA 57 (78)
T ss_dssp SCCHHHHHTCCTT--CCHHHHHHHHHHHHTTSCTTTCS-SHHHHHHHHHHHHHHH
T ss_pred CCCHHHHcCCCCC--CCHHHHHHHHHHHHHHHCcCCCC-CccHHHHHHHHHHHHH
Confidence 4699999999999 99999999999999999999997 6789999999999995
No 13
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.52 E-value=4.7e-15 Score=117.93 Aligned_cols=53 Identities=28% Similarity=0.455 Sum_probs=48.8
Q ss_pred cCCchhhcCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCC------hhHHHHHHHHHhhhC
Q 048085 287 CMDHYETLGFPRHKKIDAAVLKKEYRKKAMLVHPDKNMGS------PLASESFKKLQCAYE 341 (341)
Q Consensus 287 ~~d~YeVLGV~~~~~as~~eIKkAYRkLALk~HPDKn~g~------~~A~E~Fk~L~~AYE 341 (341)
..|+|++|||+++ ++.+|||++||++++++||||++++ +++++.|++|++|||
T Consensus 15 ~~~~y~iLgv~~~--as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~ 73 (94)
T 1wjz_A 15 KKDWYSILGADPS--ANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWK 73 (94)
T ss_dssp CSCHHHHTTCCTT--CCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCChHHHcCCCCC--CCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHH
Confidence 4699999999999 9999999999999999999999854 468899999999996
No 14
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.52 E-value=8.6e-15 Score=113.88 Aligned_cols=52 Identities=44% Similarity=0.666 Sum_probs=48.6
Q ss_pred CCchhhcCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCh-hHHHHHHHHHhhhC
Q 048085 288 MDHYETLGFPRHKKIDAAVLKKEYRKKAMLVHPDKNMGSP-LASESFKKLQCAYE 341 (341)
Q Consensus 288 ~d~YeVLGV~~~~~as~~eIKkAYRkLALk~HPDKn~g~~-~A~E~Fk~L~~AYE 341 (341)
.|+|++|||+++ ++.+|||++||++++++||||+++++ .+++.|++|++||+
T Consensus 9 ~~~y~iLgv~~~--as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~ 61 (82)
T 2ej7_A 9 VDYYEVLDVPRQ--ASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYE 61 (82)
T ss_dssp CCHHHHTTCCTT--CCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHH
T ss_pred cCHHHHcCCCCC--CCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHH
Confidence 589999999999 99999999999999999999998664 68899999999995
No 15
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.49 E-value=1.2e-14 Score=115.60 Aligned_cols=52 Identities=40% Similarity=0.552 Sum_probs=48.5
Q ss_pred CCchhhcCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCh-hHHHHHHHHHhhhC
Q 048085 288 MDHYETLGFPRHKKIDAAVLKKEYRKKAMLVHPDKNMGSP-LASESFKKLQCAYE 341 (341)
Q Consensus 288 ~d~YeVLGV~~~~~as~~eIKkAYRkLALk~HPDKn~g~~-~A~E~Fk~L~~AYE 341 (341)
.|+|++|||+++ ++.+|||++||++++++||||+++++ .++++|++|++||+
T Consensus 9 ~~~y~iLgv~~~--as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~ 61 (92)
T 2dmx_A 9 ANYYEVLGVQAS--ASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYE 61 (92)
T ss_dssp CCHHHHHTCCTT--CCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHH
T ss_pred cCHHHHcCCCCC--CCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHH
Confidence 489999999999 99999999999999999999998664 68999999999995
No 16
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.47 E-value=3.2e-14 Score=115.69 Aligned_cols=52 Identities=44% Similarity=0.675 Sum_probs=48.3
Q ss_pred CCchhhcCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCh-hHHHHHHHHHhhhC
Q 048085 288 MDHYETLGFPRHKKIDAAVLKKEYRKKAMLVHPDKNMGSP-LASESFKKLQCAYE 341 (341)
Q Consensus 288 ~d~YeVLGV~~~~~as~~eIKkAYRkLALk~HPDKn~g~~-~A~E~Fk~L~~AYE 341 (341)
.|+|++|||+++ ++.+|||++||++++++||||++++. .+++.|++|++|||
T Consensus 2 ~d~Y~iLgv~~~--as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~ 54 (99)
T 2lgw_A 2 ASYYEILDVPRS--ASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYE 54 (99)
T ss_dssp CCHHHHSSSCTT--SCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHH
T ss_pred CCHHHHcCCCCC--CCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHH
Confidence 489999999999 99999999999999999999998663 58999999999996
No 17
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.47 E-value=3.5e-14 Score=108.50 Aligned_cols=51 Identities=41% Similarity=0.619 Sum_probs=46.9
Q ss_pred ccCCchhhcCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCChhHHHHHHHHHhhhC
Q 048085 286 NCMDHYETLGFPRHKKIDAAVLKKEYRKKAMLVHPDKNMGSPLASESFKKLQCAYE 341 (341)
Q Consensus 286 ~~~d~YeVLGV~~~~~as~~eIKkAYRkLALk~HPDKn~g~~~A~E~Fk~L~~AYE 341 (341)
+..|+|++|||+++ ++.++||++||++++++||||++++ .+.|++|++||+
T Consensus 6 ~~~~~y~iLgl~~~--a~~~eIk~ayr~l~~~~HPD~~~~~---~~~f~~i~~Ay~ 56 (73)
T 2och_A 6 KETGYYDVLGVKPD--ASDNELKKAYRKMALKFHPDKNPDG---AEQFKQISQAYE 56 (73)
T ss_dssp CCCCHHHHHTCCTT--CCHHHHHHHHHHHHHHTCTTTCTTC---HHHHHHHHHHHH
T ss_pred CCCCHHHHcCCCCC--CCHHHHHHHHHHHHHHHCcCCCcCH---HHHHHHHHHHHH
Confidence 45799999999999 9999999999999999999999744 589999999995
No 18
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.44 E-value=5.5e-14 Score=112.25 Aligned_cols=51 Identities=39% Similarity=0.628 Sum_probs=46.9
Q ss_pred ccCCchhhcCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCChhHHHHHHHHHhhhC
Q 048085 286 NCMDHYETLGFPRHKKIDAAVLKKEYRKKAMLVHPDKNMGSPLASESFKKLQCAYE 341 (341)
Q Consensus 286 ~~~d~YeVLGV~~~~~as~~eIKkAYRkLALk~HPDKn~g~~~A~E~Fk~L~~AYE 341 (341)
+..|+|++|||+++ ++.+|||++||++++++||||++++ +++|++|++||+
T Consensus 6 ~~~~~y~iLgv~~~--as~~eIk~ayr~l~~~~HPDk~~~~---~~~f~~i~~Ay~ 56 (92)
T 2o37_A 6 KETKLYDLLGVSPS--ANEQELKKGYRKAALKYHPDKPTGD---TEKFKEISEAFE 56 (92)
T ss_dssp SCCHHHHHHTCCTT--CCHHHHHHHHHHHHHHHCTTSTTCC---HHHHHHHHHHHH
T ss_pred cCCCHHHHcCCCCC--CCHHHHHHHHHHHHHHHCcCCCCCh---HHHHHHHHHHHH
Confidence 45799999999999 9999999999999999999999855 479999999995
No 19
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.43 E-value=4.9e-14 Score=115.52 Aligned_cols=53 Identities=36% Similarity=0.491 Sum_probs=48.8
Q ss_pred cCCchhhcCCCCCCCC-CHHHHHHHHHHHHHhhCCCCCCC---ChhHHHHHHHHHhhhC
Q 048085 287 CMDHYETLGFPRHKKI-DAAVLKKEYRKKAMLVHPDKNMG---SPLASESFKKLQCAYE 341 (341)
Q Consensus 287 ~~d~YeVLGV~~~~~a-s~~eIKkAYRkLALk~HPDKn~g---~~~A~E~Fk~L~~AYE 341 (341)
..|+|++|||+++ + +.+|||+|||++++++||||+++ .+.|++.|++|++|||
T Consensus 14 ~~~~y~iLgv~~~--a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~ 70 (109)
T 2qsa_A 14 LENCYDVLEVNRE--EFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYE 70 (109)
T ss_dssp TSCHHHHTTCCGG--GCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHcCCCCC--CCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHH
Confidence 4699999999999 8 99999999999999999999985 3568999999999996
No 20
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.39 E-value=4.3e-14 Score=116.72 Aligned_cols=52 Identities=25% Similarity=0.402 Sum_probs=45.8
Q ss_pred cCCchhhcCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCC---Ch----hHHHHHHHHHhhhC
Q 048085 287 CMDHYETLGFPRHKKIDAAVLKKEYRKKAMLVHPDKNMG---SP----LASESFKKLQCAYE 341 (341)
Q Consensus 287 ~~d~YeVLGV~~~~~as~~eIKkAYRkLALk~HPDKn~g---~~----~A~E~Fk~L~~AYE 341 (341)
..|||++||++ . ++.++||+|||++++++|||||++ ++ .|+++|++|++|||
T Consensus 40 ~~d~Y~vl~~~-~--As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYe 98 (106)
T 3ag7_A 40 GSGWKPVPLMD-M--IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWD 98 (106)
T ss_dssp TSCCCCCCGGG-S--CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHcCCC-C--CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHH
Confidence 36999999988 5 899999999999999999999873 22 47899999999996
No 21
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.37 E-value=2e-13 Score=106.71 Aligned_cols=49 Identities=27% Similarity=0.462 Sum_probs=44.8
Q ss_pred CchhhcCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCChhHHHHHHHHHhhhC
Q 048085 289 DHYETLGFPRHKKIDAAVLKKEYRKKAMLVHPDKNMGSPLASESFKKLQCAYE 341 (341)
Q Consensus 289 d~YeVLGV~~~~~as~~eIKkAYRkLALk~HPDKn~g~~~A~E~Fk~L~~AYE 341 (341)
++|++|||+++..++.++||++||++++++||||++ + +++|++|++|||
T Consensus 12 ~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~-~---~~~f~~i~~AYe 60 (79)
T 1faf_A 12 RLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGG-S---HALMQELNSLWG 60 (79)
T ss_dssp HHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSC-C---HHHHHHHHHHHH
T ss_pred HHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCC-C---HHHHHHHHHHHH
Confidence 799999999886689999999999999999999985 3 589999999996
No 22
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.36 E-value=4.2e-13 Score=116.07 Aligned_cols=53 Identities=26% Similarity=0.431 Sum_probs=48.4
Q ss_pred cCCchhhcCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCh------hHHHHHHHHHhhhC
Q 048085 287 CMDHYETLGFPRHKKIDAAVLKKEYRKKAMLVHPDKNMGSP------LASESFKKLQCAYE 341 (341)
Q Consensus 287 ~~d~YeVLGV~~~~~as~~eIKkAYRkLALk~HPDKn~g~~------~A~E~Fk~L~~AYE 341 (341)
..|||++|||+++ ++.++||+|||++++++||||+++++ .|.+.|++|++||+
T Consensus 9 ~~~~y~iLgv~~~--a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~ 67 (155)
T 2l6l_A 9 KKDWYSILGADPS--ANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWK 67 (155)
T ss_dssp CSHHHHHHTCCTT--CCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHH
T ss_pred CCChhHhcCCCCC--CCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHH
Confidence 3589999999999 99999999999999999999998664 37899999999995
No 23
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.36 E-value=3e-13 Score=103.58 Aligned_cols=47 Identities=30% Similarity=0.395 Sum_probs=43.1
Q ss_pred CchhhcCCCC-CCCCCHHHHHHHHHHHHHhhCCCCCCCChhHHHHHHHHHhhhC
Q 048085 289 DHYETLGFPR-HKKIDAAVLKKEYRKKAMLVHPDKNMGSPLASESFKKLQCAYE 341 (341)
Q Consensus 289 d~YeVLGV~~-~~~as~~eIKkAYRkLALk~HPDKn~g~~~A~E~Fk~L~~AYE 341 (341)
++|++|||++ + ++.+|||++||++++++||||+ +++ +.|++|++|||
T Consensus 15 ~~y~iLgl~~~~--a~~~eIk~ayr~l~~~~HPDk~-g~~---~~f~~i~~Aye 62 (71)
T 2guz_A 15 EALQILNLTENT--LTKKKLKEVHRKIMLANHPDKG-GSP---FLATKINEAKD 62 (71)
T ss_dssp HHHHHTTCCTTT--CCHHHHHHHHHHHHHHHCGGGT-CCH---HHHHHHHHHHH
T ss_pred HHHHHcCCCCCC--CCHHHHHHHHHHHHHHHCCCCC-CCH---HHHHHHHHHHH
Confidence 7999999998 7 9999999999999999999996 343 79999999996
No 24
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.35 E-value=3.3e-13 Score=121.48 Aligned_cols=52 Identities=33% Similarity=0.593 Sum_probs=48.7
Q ss_pred CCchhhcCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCChh---HHHHHHHHHhhhC
Q 048085 288 MDHYETLGFPRHKKIDAAVLKKEYRKKAMLVHPDKNMGSPL---ASESFKKLQCAYE 341 (341)
Q Consensus 288 ~d~YeVLGV~~~~~as~~eIKkAYRkLALk~HPDKn~g~~~---A~E~Fk~L~~AYE 341 (341)
.|+|++|||+++ ++.+|||+|||+++++|||||+++++. |+++|++|++|||
T Consensus 117 ~d~Y~vLgv~~~--As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYe 171 (182)
T 1n4c_A 117 ETKWKPVGMADL--VTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWS 171 (182)
T ss_dssp CCCCCCCCGGGG--SSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHH
T ss_pred cchhhcCCCCCC--CCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHH
Confidence 589999999999 999999999999999999999987654 8999999999996
No 25
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.32 E-value=1.4e-13 Score=133.20 Aligned_cols=53 Identities=34% Similarity=0.433 Sum_probs=0.0
Q ss_pred ccCCchhhcCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCChhHHHHHHHHHhhhC
Q 048085 286 NCMDHYETLGFPRHKKIDAAVLKKEYRKKAMLVHPDKNMGSPLASESFKKLQCAYE 341 (341)
Q Consensus 286 ~~~d~YeVLGV~~~~~as~~eIKkAYRkLALk~HPDKn~g~~~A~E~Fk~L~~AYE 341 (341)
+.+|||++|||+++ ++.+|||+|||+++++||||||+ +++|+++|++|++|||
T Consensus 26 ~~~d~Y~vLgv~~~--as~~eIk~aYr~la~~~HPDk~~-~~~a~~~f~~i~~Ay~ 78 (329)
T 3lz8_A 26 ELKDYYAILGVQPT--DDLKTIKTAYRRLARKYHPDVSK-ENDAEAKFKDLAEAWE 78 (329)
T ss_dssp --------------------------------------------------------
T ss_pred cccCHHHHcCcCCC--CCHHHHHHHHHHHHHHHCCCCCC-ChHHHHHHHHHHHHHH
Confidence 34699999999999 99999999999999999999998 5689999999999997
No 26
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.29 E-value=3.1e-13 Score=113.01 Aligned_cols=48 Identities=31% Similarity=0.518 Sum_probs=43.8
Q ss_pred CCchhhcCCCCCCCCCH--HHHHHHHHHHHHhhCCCCCCCChhHHHHHHHHHhhhC
Q 048085 288 MDHYETLGFPRHKKIDA--AVLKKEYRKKAMLVHPDKNMGSPLASESFKKLQCAYE 341 (341)
Q Consensus 288 ~d~YeVLGV~~~~~as~--~eIKkAYRkLALk~HPDKn~g~~~A~E~Fk~L~~AYE 341 (341)
.++|++|||+++ ++. ++||+|||++++++||||+++ +++|++|++|||
T Consensus 8 ~~~Y~iLgv~~~--as~~~~eIk~aYr~la~~~HPDk~~~----~e~f~~I~~AYe 57 (114)
T 1gh6_A 8 LQLMDLLGLERS--AWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYK 57 (114)
T ss_dssp HHHHHHTTCCTT--SCSCHHHHHHHHHHTTTTCCTTTCCT----TTTTHHHHHHHH
T ss_pred hhHHHHcCCCCC--CCcCHHHHHHHHHHHHHHHCCCCCcc----HHHHHHHHHHHH
Confidence 389999999999 777 999999999999999999974 479999999996
No 27
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.26 E-value=2.8e-12 Score=117.05 Aligned_cols=55 Identities=24% Similarity=0.338 Sum_probs=48.4
Q ss_pred cCCchhhcCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCChh-----HHHHHHHHHhhhC
Q 048085 287 CMDHYETLGFPRHKKIDAAVLKKEYRKKAMLVHPDKNMGSPL-----ASESFKKLQCAYE 341 (341)
Q Consensus 287 ~~d~YeVLGV~~~~~as~~eIKkAYRkLALk~HPDKn~g~~~-----A~E~Fk~L~~AYE 341 (341)
..|||++|||++..+++.++||++||++++++||||++++++ |++.|++||+||+
T Consensus 42 ~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~ 101 (207)
T 3bvo_A 42 TRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYK 101 (207)
T ss_dssp TCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 359999999998755899999999999999999999986542 6688999999995
No 28
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.15 E-value=4.1e-12 Score=113.56 Aligned_cols=48 Identities=31% Similarity=0.509 Sum_probs=40.8
Q ss_pred CCchhhcCCCCCCCCC--HHHHHHHHHHHHHhhCCCCCCCChhHHHHHHHHHhhhC
Q 048085 288 MDHYETLGFPRHKKID--AAVLKKEYRKKAMLVHPDKNMGSPLASESFKKLQCAYE 341 (341)
Q Consensus 288 ~d~YeVLGV~~~~~as--~~eIKkAYRkLALk~HPDKn~g~~~A~E~Fk~L~~AYE 341 (341)
.|+|++|||+++ ++ .+|||+|||++++++||||+++ +++|++|++|||
T Consensus 11 ~d~Y~vLGl~~~--as~~~~eIKkAYRkLa~~~HPDk~~~----~e~F~~I~~AYe 60 (174)
T 2pf4_E 11 LQLMDLLGLERS--AWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYK 60 (174)
T ss_dssp HHHHHTTTCCGG--GTTCHHHHHHHHHHHGGGCSCC---C----CTTTTHHHHHHH
T ss_pred ccHHHHcCCCCC--CCcCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHH
Confidence 489999999999 66 7999999999999999999874 378999999996
No 29
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.10 E-value=7.8e-12 Score=129.86 Aligned_cols=53 Identities=32% Similarity=0.573 Sum_probs=26.4
Q ss_pred cCCchhhcCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCChhHHHHHHHHHhhhC
Q 048085 287 CMDHYETLGFPRHKKIDAAVLKKEYRKKAMLVHPDKNMGSPLASESFKKLQCAYE 341 (341)
Q Consensus 287 ~~d~YeVLGV~~~~~as~~eIKkAYRkLALk~HPDKn~g~~~A~E~Fk~L~~AYE 341 (341)
..|||++|||+++ ++.+|||+|||+++++|||||++++++|+++|++|++|||
T Consensus 20 ~~~~y~~lg~~~~--a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~ 72 (780)
T 3apo_A 20 DQNFYSLLGVSKT--ASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYE 72 (780)
T ss_dssp ---CHHHHTCCTT--CCHHHHHHHHCC-----------------------CTHHH
T ss_pred CCCHHHHcCCCCC--CCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHH
Confidence 3599999999999 9999999999999999999999888899999999999996
No 30
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.07 E-value=2.6e-11 Score=108.50 Aligned_cols=51 Identities=35% Similarity=0.476 Sum_probs=44.7
Q ss_pred cCCchhhc------CCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCChhHHHHHHHHHhhhC
Q 048085 287 CMDHYETL------GFPRHKKIDAAVLKKEYRKKAMLVHPDKNMGSPLASESFKKLQCAYE 341 (341)
Q Consensus 287 ~~d~YeVL------GV~~~~~as~~eIKkAYRkLALk~HPDKn~g~~~A~E~Fk~L~~AYE 341 (341)
..|||++| |+++ .+++.++||++||++++++||||+++ |.+.|++|++||+
T Consensus 10 ~~d~y~ll~~~~p~~~~~-~~a~~~eIk~aYr~la~~~HPDk~~~---a~~~f~~i~~AY~ 66 (181)
T 3uo3_A 10 TSTFYELFPKTFPKKLPI-WTIDQSRLRKEYRQLQAQHHPDMAQQ---GSEQSSTLNQAYH 66 (181)
T ss_dssp SCCTGGGCTTTCTTCSCC-SCCCHHHHHHHHHHHHHTCCTTSCCS---CSSGGGSHHHHHH
T ss_pred CCCHHHHhccccccCCCC-CCCCHHHHHHHHHHHHHHhCcCCCcc---HHHHHHHHHHHHH
Confidence 35999999 4665 23999999999999999999999985 7789999999995
No 31
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.23 E-value=5.1e-07 Score=68.66 Aligned_cols=48 Identities=15% Similarity=0.142 Sum_probs=36.7
Q ss_pred CchhhcCCCCCC-CCCHHHHHHHHHHHHHhhCCCCCCCChhHHHHHHHHHhhh
Q 048085 289 DHYETLGFPRHK-KIDAAVLKKEYRKKAMLVHPDKNMGSPLASESFKKLQCAY 340 (341)
Q Consensus 289 d~YeVLGV~~~~-~as~~eIKkAYRkLALk~HPDKn~g~~~A~E~Fk~L~~AY 340 (341)
+.|.||||++.. .++.++||++||++..+.||||. |++ ....+|++|+
T Consensus 5 EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkG-GS~---yl~~ki~~Ak 53 (65)
T 2guz_B 5 ESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKG-GSF---YLQSKVYRAA 53 (65)
T ss_dssp HHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGT-CCH---HHHHHHHHHH
T ss_pred HHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCC-CCH---HHHHHHHHHH
Confidence 567899998751 27999999999999999999997 354 3444555554
No 32
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.22 E-value=7.3e-07 Score=82.46 Aligned_cols=54 Identities=31% Similarity=0.421 Sum_probs=48.4
Q ss_pred ccCCchhhcCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCh---hHHHHHHHHHhhhC
Q 048085 286 NCMDHYETLGFPRHKKIDAAVLKKEYRKKAMLVHPDKNMGSP---LASESFKKLQCAYE 341 (341)
Q Consensus 286 ~~~d~YeVLGV~~~~~as~~eIKkAYRkLALk~HPDKn~g~~---~A~E~Fk~L~~AYE 341 (341)
+..++|++||+++. ++.++++++||++++++|||+.++++ +++++|++|++|||
T Consensus 380 ~~~~~y~~lg~~~~--~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~ 436 (450)
T 2y4t_A 380 QKRDYYKILGVKRN--AKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKE 436 (450)
T ss_dssp HSCCSGGGSCSSTT--CCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHH
T ss_pred cchhHHHHhCCCcc--CCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 34699999999999 89999999999999999999998542 48899999999996
No 33
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=78.11 E-value=0.99 Score=46.06 Aligned_cols=44 Identities=16% Similarity=0.194 Sum_probs=32.3
Q ss_pred cCCchhhcCCCCCCCCCH--HHHHHHHHHHHHhhCCCCCCCChhHHHHHHHHHhhh
Q 048085 287 CMDHYETLGFPRHKKIDA--AVLKKEYRKKAMLVHPDKNMGSPLASESFKKLQCAY 340 (341)
Q Consensus 287 ~~d~YeVLGV~~~~~as~--~eIKkAYRkLALk~HPDKn~g~~~A~E~Fk~L~~AY 340 (341)
..|+|.+||++.+ ... .+|+++||++++.-++| ++++..+..|+
T Consensus 628 ~~~~~~~lG~~~~--~~~lr~~~~~ayr~la~~~~~~--------~~r~~lvd~a~ 673 (681)
T 2pzi_A 628 KASTNHILGFPFT--SHGLRLGVEASLRSLARVAPTQ--------RHRYTLVDMAN 673 (681)
T ss_dssp CCSSSEETTEESS--HHHHHHHHHHHHHHHHHHCSSH--------HHHHHHHHHHH
T ss_pred CCCCcccCCCCCC--hHHHHHHHHHHHHHHHHhCCCh--------HHHHHHHHHhc
Confidence 4679999999776 333 56999999999976655 35666666554
No 34
>3j1r_A Archaeal adhesion filament core; helical polymer, flagellar filament, cell adhesion, structur protein; 7.50A {Ignicoccus hospitalis}
Probab=23.46 E-value=68 Score=20.08 Aligned_cols=16 Identities=25% Similarity=0.441 Sum_probs=7.5
Q ss_pred HHHHHHHHHHHHHHHH
Q 048085 101 LYVLLSMGAAGAAVRY 116 (341)
Q Consensus 101 ~~~l~~~~~~~~~~~~ 116 (341)
.-.|+...++++|..|
T Consensus 7 ~~lLIviav~aaVlly 22 (26)
T 3j1r_A 7 TLLLILIAVAAAVLLY 22 (26)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3344444455555444
Done!