BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048095
(535 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P49455|TPM4_DROME Tropomyosin-1, isoforms 33/34 OS=Drosophila melanogaster GN=Tm1
PE=2 SV=2
Length = 518
Score = 39.7 bits (91), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 35 ELALV-QKEIEECNSELWCKEKELGLVQKRIRGCNGELQSKQGELALVEKEIEESNSELQ 93
E ALV ++E + N+ E+E +QK+I+ EL Q L LV ++EE N LQ
Sbjct: 20 ERALVCEQEARDANTRAEKAEEEARQLQKKIQTVENELDQTQEALTLVTGKLEEKNKALQ 79
Query: 94 SKEIELGLLQKRVGECNCELECKQQQLGLAQS 125
+ E E+ L +R+ +LE +++LG A +
Sbjct: 80 NAESEVAALNRRIQLLEEDLERSEERLGSATA 111
>sp|B3LFU6|SP110_YEAS1 Spindle pole body component 110 OS=Saccharomyces cerevisiae (strain
RM11-1a) GN=SPC110 PE=3 SV=1
Length = 944
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 35/206 (16%)
Query: 1 MKTRTNEIRGFNLKLQCKERQLRFLEKRIGESKGELALVQKEIEECNSELWCKEKELGLV 60
++ RTNE+ +K + QL+ + K EL ++ + E S+ KE EL ++
Sbjct: 299 LRKRTNELNELKIKSDEMDLQLKQKQNESKRLKDELNELETKFRENGSQSSAKENELKML 358
Query: 61 QKRIRGCNGELQSKQGELALVEKEIEESNSELQSKEIELGLLQKRVGECNCELECKQQQL 120
+ +I A +E+EI NS+L +KE +L L ++ + +L + QL
Sbjct: 359 KNKI--------------AELEEEISTKNSQLIAKEGKLASLMAQLTQLESKLNQRDSQL 404
Query: 121 GLAQSEEDLLKNSLKNSIEHWSQKLNLTKEELSLLQKSIRECKGELDSKERQLAVVQKRI 180
G EE+L K + K LQK IR + E SK+ ++ +QK++
Sbjct: 405 G--SREEELKKTNDK-------------------LQKDIRIAREETVSKDERITDLQKKV 443
Query: 181 GECNNELQLKENELNLVKTVVEHCLQ 206
+ N+L + + + KT+ ++ L+
Sbjct: 444 KQLENDLFVIKKTHSESKTITDNELE 469
>sp|A6ZYV5|SP110_YEAS7 Spindle pole body component 110 OS=Saccharomyces cerevisiae (strain
YJM789) GN=SPC110 PE=3 SV=1
Length = 944
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 35/206 (16%)
Query: 1 MKTRTNEIRGFNLKLQCKERQLRFLEKRIGESKGELALVQKEIEECNSELWCKEKELGLV 60
++ RTNE+ +K + QL+ + K EL ++ + E S+ KE EL ++
Sbjct: 299 LRKRTNELNELKIKSDEMDLQLKQKQNESKRLKDELNELETKFSENGSQSSAKENELKML 358
Query: 61 QKRIRGCNGELQSKQGELALVEKEIEESNSELQSKEIELGLLQKRVGECNCELECKQQQL 120
+ +I A +E+EI NS+L +KE +L L + + +L + QL
Sbjct: 359 KNKI--------------AELEEEISTKNSQLIAKEGKLASLMAHLTQLESKLNQRDSQL 404
Query: 121 GLAQSEEDLLKNSLKNSIEHWSQKLNLTKEELSLLQKSIRECKGELDSKERQLAVVQKRI 180
G EE+L K + K LQK IR + E SK+ ++ +QK++
Sbjct: 405 G--SREEELKKTNDK-------------------LQKDIRIAREETVSKDERITDLQKKV 443
Query: 181 GECNNELQLKENELNLVKTVVEHCLQ 206
+ N+L + + + KT+ ++ L+
Sbjct: 444 KQLENDLFVIKKTHSESKTITDNELE 469
>sp|Q8N1N0|CLC4F_HUMAN C-type lectin domain family 4 member F OS=Homo sapiens GN=CLEC4F
PE=2 SV=2
Length = 589
Score = 38.1 bits (87), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 67/359 (18%), Positives = 152/359 (42%), Gaps = 64/359 (17%)
Query: 7 EIRGFNLKLQCKERQLRFLEKRIGESKGELALVQKEIEECNSELWCKEKELGLVQKRIRG 66
EI+ ++ QL+ L +G + ++ +V+ +++ + + +++ + G
Sbjct: 120 EIQMLKCRVDNVNSQLQVLGDHLGNTNADIQMVKGVLKDATT----LSLQTQMLRSSLEG 175
Query: 67 CNGELQSKQGEL----ALVEKEIEESNSELQSKEIELGLLQKRVGECNCELECKQQQLGL 122
N E+Q + +L AL + + S L++ IEL +L + + N E++ L
Sbjct: 176 TNAEIQRLKEDLEKADALTFQTLNFLKSSLENTSIELHVLSRGLENANSEIQMLNASLET 235
Query: 123 AQSEEDLLKNSLKNSIEHWSQKLNLTKEELSLLQKSIRECKGELDSKE---RQLAVVQKR 179
A ++ L +SLKN+ E+ +L +G LDS Q V++
Sbjct: 236 ANTQAQLANSSLKNA-----------NAEIYVL-------RGHLDSVNDLRTQNQVLRNS 277
Query: 180 IGECNNELQ-LKEN------------------------ELNLVKTVVEHCLQKLNLKKEE 214
+ N E+Q LKEN E+ ++ +E ++++ K +
Sbjct: 278 LEGANAEIQGLKENLQNTNALNSQTQAFIKSSFDNTSAEIQFLRGHLERAGDEIHVLKRD 337
Query: 215 LSLLQKSNGEWNGQLECGERQLELRLEPESGIKDCSQQIELKEKKLRQIQSSIEECEKEL 274
L ++ + NG+L+ + Q+++ + + QI++ + ++ +E+
Sbjct: 338 LKMVTAQTQKANGRLDQTDTQIQVFKSEMENVNTLNAQIQV-------LNGHMKNASREI 390
Query: 275 AIKERHISDYEEKLKAKEKLYDEIKKSIKELESAKKELEQPKSLT---DNEETRLLSLQ 330
++ + + + L ++K+ E++ + +LE K+LT E++RL +L
Sbjct: 391 QTLKQGMKNASALTSQTQMLDSNLQKASAEIQRLRGDLENTKALTMEIQQEQSRLKTLH 449
>sp|P32380|SP110_YEAST Spindle pole body component 110 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SPC110 PE=1 SV=1
Length = 944
Score = 38.1 bits (87), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 170/355 (47%), Gaps = 55/355 (15%)
Query: 1 MKTRTNEIRGFNLKLQCKERQLRFLEKRIGESKGELALVQKEIEECNSELWCKEKELGLV 60
++ RTNE+ +K + QL+ + K EL ++ + E S+ KE EL ++
Sbjct: 299 LRKRTNELNELKIKSDEMDLQLKQKQNESKRLKDELNELETKFSENGSQSSAKENELKML 358
Query: 61 QKR-------IRGCNGELQSKQGELALVEKEIEESNSELQSKEIELGLLQKRVGECNCEL 113
+ + I N +L +K+G+LA + ++ + S+L ++ +LG ++ + + N +L
Sbjct: 359 KNKIAELEEEISTKNSQLIAKEGKLASLMAQLTQLESKLNQRDSQLGSREEELKKTNDKL 418
Query: 114 ECKQQQLGLAQSEEDLLKNSLKNSIEHWSQKLNLTKEELSLLQKSIRECK----GELDSK 169
Q+ + +A+ EE + K+ I +K+ + +L +++K+ E K EL+SK
Sbjct: 419 ---QKDIRIAR-EETVSKDE---RIIDLQKKVKQLENDLFVIKKTHSESKTITDNELESK 471
Query: 170 -------ERQLAVVQKRIGECNNELQLKENELNLVKTVVEHCLQKLNLKKEELSLLQKSN 222
E L V Q++ + EL+ +E + ++ +E LN E++S L N
Sbjct: 472 DKLIKILENDLKVAQEKYSKMEKELKEREFNYKISESKLEDEKTTLN---EKISNLAAEN 528
Query: 223 GEWNGQLECG-----------ERQLE-LRLEPE---SGIKDCSQQIELKEKKLRQIQSSI 267
+ ++E E+QLE LR + E KD +IE E K+R ++S
Sbjct: 529 SQLKNKIEDNSTATHHMKENYEKQLESLRKDIEEYKESAKDSEDKIE--ELKIRIAENSA 586
Query: 268 EECE---KELAIKERHISDYEEKLKAKEKLYDEIK--KSIKELESAKKELEQPKS 317
+ E K++ K+ ISD + LK +E DEI KSI ++ KK+ Q KS
Sbjct: 587 KVSEKRSKDIKQKDEQISDLTQNLKLQE---DEISSLKSI--IDRYKKDFNQLKS 636
>sp|Q9DEX1|CAO1A_XENLA Calcium-binding and coiled-coil domain-containing protein 1-A
OS=Xenopus laevis GN=calcoco1-a PE=1 SV=2
Length = 560
Score = 36.6 bits (83), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 145/293 (49%), Gaps = 44/293 (15%)
Query: 52 CKEKELGLVQKRIRGCNGELQSKQGELALVEKEIEESNSELQSKEIELGLLQKRVGECNC 111
C+E EL ++RI E+QS ++ ++ +E + + S E E G L++R+GE
Sbjct: 232 CQEAEL---RERILQLESEIQSMNKKMQENDRVLEGTVAIKFSLETEKGELKQRLGETTV 288
Query: 112 ELECKQQQLGLAQSEEDLLKNSLKNSIEHWS---QKLNLTKEELSLLQKSIRECK-GELD 167
E+E Q Q+ D L+ L++S + S QK L EEL+ + SIR+C +L
Sbjct: 289 EIERYQLQV-------DSLREKLRSSQDMLSSSQQKALLMGEELASM-SSIRDCTISDLH 340
Query: 168 SKERQLAVVQKRIGECNNELQLKENELNLVKTVVEHCL-----QKLNLKKEELSL---LQ 219
+ A + ++ + + + + + KT + H + Q +NLK E+LSL LQ
Sbjct: 341 KSRLETADLAIKVSDLSVKFKEGMGQWWQEKTALNHSMEAKRDQIVNLKAEKLSLDNSLQ 400
Query: 220 KSNGEWNGQLECGERQLELRLEPESGIKDCSQQIELKE--KKLRQIQSS--IEECEKELA 275
+ + + L+ +L E+ ++Q++L E ++L +++S+ + + EKE
Sbjct: 401 EERSQRHA--------LQCKLNQETD----ARQVQLSENRRELSELKSALKVTQMEKEQL 448
Query: 276 IKERH-ISDYEEKLKAK-EKLYDEIKKSIKELESAKKELEQPK---SLTDNEE 323
I+ER I Y +L+ + +KL DE K K L K + P L+D+++
Sbjct: 449 IEERQEIHQYVRRLEERLDKLADEKWKEDKMLMEDKTDSSPPTLSVDLSDSDD 501
>sp|Q99MI1|RB6I2_MOUSE ELKS/Rab6-interacting/CAST family member 1 OS=Mus musculus GN=Erc1
PE=1 SV=1
Length = 1120
Score = 36.2 bits (82), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 95/212 (44%), Gaps = 24/212 (11%)
Query: 14 KLQCKERQLRFLEKRIGESKGELALVQKEIEECNSELWCKEKELGLVQKRIRGCNGELQS 73
K+ ER LR LE+ I K AL +E EE ++ ++ ++ EL S
Sbjct: 390 KISSMERGLRDLEEEIQMLKSNGALSSEEREEEMKQMEVYRSHSKFMKNKVEQLKEELSS 449
Query: 74 K--QGE-----LALVEKEIEESNSELQSKEIELGLLQKRVGECNCE-------------- 112
K QGE A ++ EI + EL K+ EL LQ ++ +
Sbjct: 450 KDAQGEELKKRAAGLQSEIGQVKQELSRKDTELLALQTKLETLTNQFSDSKQHIEVLKES 509
Query: 113 LECKQQQLGLAQSEEDLLKNSL---KNSIEHWSQKLNLTKEELSLLQKSIRECKGELDSK 169
L K+Q+ + Q+E D L+ L + + ++++ EE I + K LD K
Sbjct: 510 LTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDVK 569
Query: 170 ERQLAVVQKRIGECNNELQLKENELNLVKTVV 201
ER++ V+QK+I +L+ KE +++ +K V
Sbjct: 570 ERKVNVLQKKIENLQEQLRDKEKQMSSLKERV 601
>sp|Q8IUD2|RB6I2_HUMAN ELKS/Rab6-interacting/CAST family member 1 OS=Homo sapiens GN=ERC1
PE=1 SV=1
Length = 1116
Score = 36.2 bits (82), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 24/212 (11%)
Query: 14 KLQCKERQLRFLEKRIGESKGELALVQKEIEECNSELWCKEKELGLVQKRIRGCNGELQS 73
K+ ER LR LE+ I K AL +E EE ++ ++ ++ EL S
Sbjct: 390 KISSMERGLRDLEEEIQMLKSNGALSTEEREEEMKQMEVYRSHSKFMKNKVEQLKEELSS 449
Query: 74 K--------------QGELALVEKEIEESNSELQSKEIELGLLQKRVGECNCELE----- 114
K Q E+ V++E+ ++EL + + +L L + + +E
Sbjct: 450 KEAQWEELKKKAAGLQAEIGQVKQELSRKDTELLALQTKLETLTNQFSDSKQHIEVLKES 509
Query: 115 --CKQQQLGLAQSEEDLLKNSL---KNSIEHWSQKLNLTKEELSLLQKSIRECKGELDSK 169
K+Q+ + Q+E D L+ L + + ++++ EE I + K LD K
Sbjct: 510 LTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDVK 569
Query: 170 ERQLAVVQKRIGECNNELQLKENELNLVKTVV 201
ER++ V+QK+I +L+ KE +++ +K V
Sbjct: 570 ERKVNVLQKKIENLQEQLRDKEKQMSSLKERV 601
>sp|Q3TVA9|CC136_MOUSE Coiled-coil domain-containing protein 136 OS=Mus musculus
GN=Ccdc136 PE=2 SV=2
Length = 1136
Score = 35.8 bits (81), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 41/180 (22%)
Query: 59 LVQKRIRGCNGELQSKQGELALVEKEIEESNSELQSKEIELGLLQKRVGECNCELECKQQ 118
+ K+I+ GELQ + E++L+E E E SEL KE+E Q
Sbjct: 104 VFTKQIQQLQGELQHLREEISLLEHEKE---SEL--KEME-------------------Q 139
Query: 119 QLGLAQSE-EDLLKNSLKNSIEHWSQKLNLTKEELSLLQKSIRECKGELDSKERQLAVVQ 177
+L LAQ+E ++L + + ++ EH S +++ LQ + + +LD ER +
Sbjct: 140 ELHLAQAEIQNLRQAAADSATEHES--------DIASLQDDLCRLQNDLDDMERIRGDYE 191
Query: 178 KRIGECNNELQLKENE--------LNLVKTVVEHCLQKLNLKKEELSLLQKSNGEWNGQL 229
I E++LK +E + ++ + H ++ NL EE L++SN GQL
Sbjct: 192 MEIASLRAEMELKTSEPSNLSISDFSGIQDELHHLRERYNLLNEEYQALRESNSSLTGQL 251
>sp|C8Z5R8|SP110_YEAS8 Spindle pole body component 110 OS=Saccharomyces cerevisiae (strain
Lalvin EC1118 / Prise de mousse) GN=SPC110 PE=3 SV=1
Length = 944
Score = 35.8 bits (81), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 104/217 (47%), Gaps = 32/217 (14%)
Query: 13 LKLQCKERQLRFLEKRIGESKGELALVQKEIEECNSELWCKEKELG-----LVQKRIRGC 67
LKL+ KE +L+ L EL ++ EE +++L K+ EL L + +I+
Sbjct: 262 LKLRSKEDELKNL-------MNELNELKSNAEEKDTQLEFKKNELRKRTIELNELKIKSD 314
Query: 68 NGELQSKQ---------GELALVEKEIEESNSELQSKEIELGLLQKRVGECNCELECKQQ 118
+LQ KQ EL +E + E+ S+ +KE EL +L+ ++ E E+ K
Sbjct: 315 EMDLQLKQKQNESKRLKDELNELETKFSENGSQSSAKENELKMLKNKIAELEEEISTKNS 374
Query: 119 QL-----GLAQSEEDLLKNSLKNSIEHWSQKLNLTKEEL----SLLQKSIRECKGELDSK 169
QL LA L + L++ + +L +EEL LQK IR + E SK
Sbjct: 375 QLIAKEGKLASLMAQLTQ--LESKLNQRDSQLGSREEELKKTNDKLQKDIRIAREETVSK 432
Query: 170 ERQLAVVQKRIGECNNELQLKENELNLVKTVVEHCLQ 206
+ ++ +QK++ + N+L + + + KT+ ++ L+
Sbjct: 433 DERITDLQKKVKQLENDLFVIKKTHSESKTITDNELE 469
>sp|O42184|CLIP1_CHICK CAP-Gly domain-containing linker protein 1 OS=Gallus gallus GN=CLIP1
PE=2 SV=1
Length = 1433
Score = 34.3 bits (77), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 149/336 (44%), Gaps = 59/336 (17%)
Query: 35 ELALVQK-------EIEECNSELWCKEKEL-GLVQKRIRGCNGELQSKQGELALVEKEIE 86
+LA +QK EI++ + +L EK++ L +++ ELQ K+ +L +EK +
Sbjct: 765 DLAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVSNLTKELQGKEQKLLDLEKNLS 824
Query: 87 ESNSELQSKEIELGLL--------------QKRVGECNCELECKQQQLGLAQSEEDLLKN 132
N S E EL LL Q+ + E +L K++Q L SE + LK+
Sbjct: 825 AVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKS 884
Query: 133 SLKNSIEHWSQKLNLTKEELSLLQKSIRECK-GELDSK-ERQLAVVQKRIGECNNELQLK 190
NLT E L ++ RE + E K E +A + K G+ + +L
Sbjct: 885 -------------NLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKM 931
Query: 191 ENELNLVKTVVEHCLQKLNLKKEELSLLQKSNGEWNGQLECGERQLELRLEPE------S 244
+EL L + +E +L E+ LQK N E Q +Q L+ E
Sbjct: 932 NDELRLKERQLEQIQLELTKANEKAVQLQK-NVEQTAQKAEQSQQETLKTHQEELKKMQD 990
Query: 245 GIKDCSQQIELKEKKLRQIQSSIEECEKELAIK--------ERHISDYEEKLKAKEKLYD 296
+ D +Q+E + + + +Q+ E+ E+ K ++++ D EE LKA +K D
Sbjct: 991 QLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDADIKGFKQNLLDAEEALKAAQKKND 1050
Query: 297 EIKKSIKELESAKKELEQPKSLTDNEETRLLSLQSM 332
E++ +EL KK+ EQ K+ EE LQ+M
Sbjct: 1051 ELETQAEEL---KKQAEQAKADKRAEEV----LQTM 1079
>sp|Q54CS9|RAD50_DICDI DNA repair protein RAD50 OS=Dictyostelium discoideum GN=rad50 PE=3
SV=1
Length = 1351
Score = 33.9 bits (76), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 136/291 (46%), Gaps = 46/291 (15%)
Query: 18 KERQLRFLEKRIGESKGELAL-VQKEIE--ECNSELWCKEKELGLVQKRIRGCNGELQSK 74
KE Q LE+++ E+ L Q +IE E S L+ +++ LV + I +QS
Sbjct: 801 KESQKNLLEQQLKS--NEMVLEKQNQIESLESQSVLY---QQVTLVFQYIDQTKQSIQSI 855
Query: 75 QGELALVEKEIEESNSELQSKEIELGLLQKRVGECNCELECKQQQLGLAQSEEDLLKNSL 134
+ E+ EKEI + +S+L++ + E + +LE +Q+QL + E N
Sbjct: 856 ESEIQKEEKEIMKQSSDLRT-----------IEEVDKDLEIQQEQLKTIEKEISNFTNKQ 904
Query: 135 KNS---IEHWSQKLNLTKEELSLLQKS------IRECKGELDSKERQLAV----VQKRIG 181
KN I ++L K +L+ ++ + +R+ K EL S +QL + +Q+ I
Sbjct: 905 KNDQIGIFEKERQLISIKNQLTTIKSASGIIDHLRDTKKELQSNNQQLQLEIENLQQSID 964
Query: 182 ECNNELQLKENELNLVKTVVEHCLQKLNLKKEELSLLQKSNGEWNGQLECGERQLELRLE 241
+ NN+ + ENE ++ E + + +K S+ S ++ L+
Sbjct: 965 QSNNDAKQLENEFQQLEIEFEKKIDAYSKEKNTFSVRLDSINSLQSKI----------LD 1014
Query: 242 PESGIKDCSQQIELKEKKLRQIQSSIEECEKELAIKERHISDYEEKLKAKE 292
P C Q E++EK ++++S++ ++ I ++HIS ++ L +K+
Sbjct: 1015 PSEL---CKQLNEIQEKN-QELESNLSTLSQDYLIGQQHISTIQQNLSSKD 1061
>sp|Q9NFZ4|TPM_LEPDS Tropomyosin OS=Lepidoglyphus destructor PE=1 SV=1
Length = 284
Score = 33.5 bits (75), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 49/88 (55%), Gaps = 7/88 (7%)
Query: 9 RGFNLKLQCKERQLRFLEKRIGESKGELALVQKEIEECNSELWCKEKEL-------GLVQ 61
R NL+ + E ++R L+K+I + + EL VQ+ + + N++L KEK L +
Sbjct: 30 RDANLRAEKSEEEVRGLQKKIQQIENELDQVQESLTQANTKLEEKEKSLQTAEGDVAALN 89
Query: 62 KRIRGCNGELQSKQGELALVEKEIEESN 89
+RI+ +L+ +G L + ++EE++
Sbjct: 90 RRIQLIEEDLERSEGRLKIATSKLEEAS 117
>sp|Q8CDI6|CD158_MOUSE Coiled-coil domain-containing protein 158 OS=Mus musculus
GN=Ccdc158 PE=2 SV=1
Length = 1109
Score = 33.5 bits (75), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 138/314 (43%), Gaps = 43/314 (13%)
Query: 23 RFLEKRIGESKGELALVQKEIEECNSELWCKEKELGLVQKRIRGCNGELQSKQGELAL-- 80
R E +I E + +L L E+ E +E +E G + +++ +L ++ EL+L
Sbjct: 337 RMYEDKIEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQKLLADLHKREKELSLEK 396
Query: 81 -------------------VEKEIEESNSELQSKEIELGLLQKRVGECNCELECKQQQLG 121
+ +E+++ N E+Q E LL+ EC ++E +Q+
Sbjct: 397 EQNKRLWDRDTGNSITIDHLRRELDDRNMEVQRLE---ALLKAMKSECQGQME---RQMA 450
Query: 122 LAQSEEDLLKNSLKNSIEHWSQKLNLTKEELSLLQKSIRECKGELDSKERQLAVVQKRIG 181
Q KN + + +L TKE L R+ EL +K+ L ++ +
Sbjct: 451 AIQG-----KNESLEKVSSLTAQLESTKEML-------RKVVEELTAKKMNLESSERTVS 498
Query: 182 ECNNELQLKENELNLVKTVVEHCLQKLNLKKEELSLLQKSNGEW--NGQLECGERQLELR 239
+ LQ KE + + +++LK +EL L K+ G+ N Q EC +L++
Sbjct: 499 DLTASLQEKERAIEATNAEITKLRSRVDLKLQELQHL-KNEGDHLRNVQTECEALKLQM- 556
Query: 240 LEPESGIKDCSQQIELKEKKLRQIQSSIEECEKELAIKERHISDYEEKLKAKEKLYDEIK 299
E + I+ QQIE + + Q + + E A E+ I+D + +L+ + L D+
Sbjct: 557 AEKDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKAQLEKEINDRKLELQEFKILKDKKD 616
Query: 300 KSIKELESAKKELE 313
I+ELE+ +LE
Sbjct: 617 AKIRELEARVSDLE 630
>sp|Q5M9N0|CD158_HUMAN Coiled-coil domain-containing protein 158 OS=Homo sapiens
GN=CCDC158 PE=1 SV=2
Length = 1113
Score = 32.7 bits (73), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 137/312 (43%), Gaps = 39/312 (12%)
Query: 23 RFLEKRIGESKGELALVQKEIEECNSELWCKEKELGLVQKRIRGCNGELQSKQGELALVE 82
R E + E + +L L E+ E +E +E G + +++ +L ++ EL+L E
Sbjct: 338 RMYEDKTEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQKLLADLHKREKELSL-E 396
Query: 83 KE---------------IEESNSELQSKEIEL----GLLQKRVGECNCELECKQQQLGLA 123
KE I+ EL ++ +E+ LL+ EC ++E +Q+
Sbjct: 397 KEQNKRLWDRDTGNSITIDHLRRELDNRNMEVQRLEALLKALKSECQGQME---RQMAAI 453
Query: 124 QSEEDLLKNSLKNSIEHWSQKLNLTKEELSLLQKSIRECKGELDSKERQLAVVQKRIGEC 183
Q KN + + +L TKE L R+ EL +K+ L ++ I +
Sbjct: 454 QG-----KNESLEKVSSLTAQLESTKEML-------RKVVEELTAKKMTLESSERTISDL 501
Query: 184 NNELQLKENELNLVKTVVEHCLQKLNLKKEELSLLQKSNGEW--NGQLECGERQLELRLE 241
LQ KE + + +++LK +EL L K+ G+ N Q EC +L++ E
Sbjct: 502 TTSLQEKERAIEATNAEITKLRSRVDLKLQELQHL-KNEGDHLRNVQTECEALKLQM-TE 559
Query: 242 PESGIKDCSQQIELKEKKLRQIQSSIEECEKELAIKERHISDYEEKLKAKEKLYDEIKKS 301
+ I+ QQIE + + Q + + E A E+ I+D +LK + L D+
Sbjct: 560 KDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKAQLEKEINDRRMELKELKILKDKKDAK 619
Query: 302 IKELESAKKELE 313
I+ELE+ +LE
Sbjct: 620 IRELEARVSDLE 631
>sp|A2AL36|CNTRL_MOUSE Centriolin OS=Mus musculus GN=Cntrl PE=2 SV=2
Length = 2334
Score = 32.3 bits (72), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 101/227 (44%), Gaps = 13/227 (5%)
Query: 13 LKLQCKERQLRFLEKRIGESKGELALVQKEI-EECNSELWCKEKELGLVQKRIRGCNGEL 71
L L E+QLR L+ E + + Q+EI +E N + K+ + + ++ EL
Sbjct: 1492 LNLVKAEQQLRLLQAD-AEDLEQHKIKQEEILKEINKVVAAKDADFQCLNEKKEKLTEEL 1550
Query: 72 QSKQGELALVEKE-------IEESNSELQSKEIELGLLQKRVGECNCELECKQQQLGLAQ 124
QS Q ++ + + ES + LQ+K EL L+ +V EL +LG +
Sbjct: 1551 QSLQRDIKAAQHSEDHHLQVLRESETLLQAKRAELETLKSQVTSQQQELAVLDSELGHRR 1610
Query: 125 SEEDLLKNSLKNSIEHWSQKLNLTKEELSLLQKSIRECKGELDSKERQLAVVQKRIGECN 184
E LL++SL + + L L + E++ IRE K L+ Q + I E
Sbjct: 1611 EELLLLQDSLAQAKADLQEALTLGETEVAEKCSHIREVKSLLEELSFQKGELNVHISEKK 1670
Query: 185 NELQLKENELNLVKTVVEHCLQKLNLKKEEL----SLLQKSNGEWNG 227
+L L + E+ + ++ LQ+L+ K EL +LQ E G
Sbjct: 1671 TQLALIQQEMEKEEKNLQVVLQQLSRHKTELKNVADILQLETSELQG 1717
>sp|Q66HR5|CACO1_RAT Calcium-binding and coiled-coil domain-containing protein 1
OS=Rattus norvegicus GN=Calcoco1 PE=2 SV=1
Length = 691
Score = 32.3 bits (72), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 147/335 (43%), Gaps = 46/335 (13%)
Query: 24 FLEKRIGESKGELALVQKEIEECNSELWCKEKELGLVQKRIRGCNGELQSKQGELALVEK 83
L ++ GE + ++ +I+ + ++ KE EL V+ ++ E + G+L +
Sbjct: 218 ILSQQQGEHVARILELEDDIQTMSDKVLMKEVELDRVRDMVKALTREQEKLLGQLKEFQA 277
Query: 84 EIEESNSELQSKEIELGLLQKRVGECNCELECKQQQLGLAQSEEDLLKNSLKNSIEHWSQ 143
+ E+S +ELQ+ V E NC L + Q+ Q E+ LK+ + H
Sbjct: 278 DKEQSEAELQT-----------VREENCHLNTELQEAKGRQEEQGAQVQRLKDKVAHMKD 326
Query: 144 KLNLTKEELSLLQKSIRECKG--ELDSKERQLAVV------------QKRIGECN-NELQ 188
L T+++++ L+ + +G EL + +Q A + + I E + + L+
Sbjct: 327 TLGQTQQKVAELEPLKEQLRGVQELAASSQQKAALLGEELASAAGARDRTIAELHRSRLE 386
Query: 189 LKENELNLVKTVVEHCLQKLNLKKEELSLLQKSNGEWNGQLECG------------ERQL 236
+ E L + + +K KE LLQ E + L+ ER
Sbjct: 387 VAEVNGRLAELSLHMKEEKCQWSKERTGLLQSMEAEKDKILKLSAEILRLEKTVQEERSQ 446
Query: 237 ELRLEPESGIKDCSQQIELKEKK--LRQIQSSIEECEKE---LAIKERHISDYEEKLKAK 291
+ E + S ++L E K L +++S++ +KE L +++ + +Y KL+A+
Sbjct: 447 SHMFKTELAREKDSSLVQLSESKRELTELRSALRVLQKEKEQLQTEKQELLEYMRKLEAR 506
Query: 292 -EKLYDEI--KKSIKELESAKKELEQPKSLTDNEE 323
EK+ DE + + E E A L P +LTD+E+
Sbjct: 507 LEKVADEKWNEDAATEDEEATAGLSCPAALTDSED 541
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.131 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 187,875,589
Number of Sequences: 539616
Number of extensions: 7995871
Number of successful extensions: 57714
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 702
Number of HSP's successfully gapped in prelim test: 2628
Number of HSP's that attempted gapping in prelim test: 36875
Number of HSP's gapped (non-prelim): 12226
length of query: 535
length of database: 191,569,459
effective HSP length: 122
effective length of query: 413
effective length of database: 125,736,307
effective search space: 51929094791
effective search space used: 51929094791
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)