Query 048097
Match_columns 224
No_of_seqs 261 out of 1643
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 10:33:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048097.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048097hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1fi2_A Oxalate oxidase, germin 100.0 2.9E-51 9.8E-56 343.7 22.0 198 23-223 1-200 (201)
2 3kgl_A Cruciferin; 11S SEED gl 100.0 3.5E-33 1.2E-37 259.7 15.5 153 61-219 288-443 (466)
3 3qac_A 11S globulin SEED stora 100.0 2E-32 7E-37 254.6 15.2 147 67-219 295-443 (465)
4 3ksc_A LEGA class, prolegumin; 100.0 5.2E-32 1.8E-36 253.6 17.9 154 60-219 322-478 (496)
5 2e9q_A 11S globulin subunit be 100.0 1.6E-31 5.4E-36 248.9 15.6 148 67-220 294-443 (459)
6 3fz3_A Prunin; TREE NUT allerg 100.0 4.3E-31 1.5E-35 247.8 14.4 153 60-219 358-514 (531)
7 2cav_A Protein (canavalin); vi 100.0 2.3E-30 8E-35 240.4 16.2 161 54-220 241-413 (445)
8 1uij_A Beta subunit of beta co 100.0 3.3E-30 1.1E-34 237.7 16.0 161 54-220 209-384 (416)
9 3c3v_A Arachin ARAH3 isoform; 100.0 2.4E-29 8.1E-34 236.4 17.9 148 67-220 344-493 (510)
10 2ea7_A 7S globulin-1; beta bar 100.0 1.5E-29 5.2E-34 234.3 16.2 161 53-219 225-399 (434)
11 1fxz_A Glycinin G1; proglycini 100.0 3.7E-29 1.3E-33 234.0 18.6 147 68-220 311-459 (476)
12 2d5f_A Glycinin A3B4 subunit; 100.0 2.3E-29 8E-34 236.1 15.1 154 60-220 331-485 (493)
13 3s7i_A Allergen ARA H 1, clone 100.0 5.8E-29 2E-33 229.3 13.9 156 58-219 226-408 (418)
14 1dgw_A Canavalin; duplicated s 99.9 8.7E-27 3E-31 191.7 14.7 151 58-219 2-167 (178)
15 2phl_A Phaseolin; plant SEED s 99.9 2E-26 7E-31 211.1 13.3 148 62-220 213-372 (397)
16 2e9q_A 11S globulin subunit be 99.9 5.8E-25 2E-29 204.7 13.9 140 75-221 44-237 (459)
17 2vqa_A SLL1358 protein, MNCA; 99.9 3.4E-24 1.2E-28 192.2 18.1 160 52-221 194-353 (361)
18 2ea7_A 7S globulin-1; beta bar 99.9 2.5E-24 8.6E-29 199.3 14.6 152 57-217 20-185 (434)
19 2cav_A Protein (canavalin); vi 99.9 3.5E-24 1.2E-28 198.9 14.9 154 57-219 46-212 (445)
20 1uij_A Beta subunit of beta co 99.9 3.8E-24 1.3E-28 197.2 13.2 154 57-219 8-176 (416)
21 3ksc_A LEGA class, prolegumin; 99.9 4.7E-24 1.6E-28 199.8 13.9 135 76-217 28-214 (496)
22 3qac_A 11S globulin SEED stora 99.9 6.2E-24 2.1E-28 197.6 14.0 139 74-219 30-237 (465)
23 2phl_A Phaseolin; plant SEED s 99.9 4.9E-24 1.7E-28 195.3 13.0 152 57-217 11-181 (397)
24 1fxz_A Glycinin G1; proglycini 99.9 4.8E-24 1.6E-28 199.4 13.1 139 75-221 29-229 (476)
25 3s7i_A Allergen ARA H 1, clone 99.9 1.3E-23 4.3E-28 193.7 13.6 134 75-218 21-169 (418)
26 2d5f_A Glycinin A3B4 subunit; 99.9 9.3E-23 3.2E-27 191.4 14.1 141 76-221 27-232 (493)
27 3kgl_A Cruciferin; 11S SEED gl 99.9 2.6E-22 8.9E-27 186.7 13.1 139 74-219 23-245 (466)
28 3c3v_A Arachin ARAH3 isoform; 99.9 3.8E-22 1.3E-26 187.5 13.1 140 75-219 29-269 (510)
29 3fz3_A Prunin; TREE NUT allerg 99.9 1.8E-21 6E-26 182.7 13.5 141 74-219 28-297 (531)
30 2vqa_A SLL1358 protein, MNCA; 99.9 1.6E-20 5.4E-25 168.3 17.5 150 59-219 20-172 (361)
31 1j58_A YVRK protein; cupin, de 99.8 2E-19 6.7E-24 162.8 18.3 155 55-220 221-375 (385)
32 1dgw_X Canavalin; duplicated s 99.8 8.3E-21 2.8E-25 137.0 5.7 74 61-135 3-76 (79)
33 1j58_A YVRK protein; cupin, de 99.8 3.9E-19 1.3E-23 160.9 13.3 146 60-218 48-196 (385)
34 3h8u_A Uncharacterized conserv 99.5 3.8E-14 1.3E-18 108.1 11.1 84 94-184 38-121 (125)
35 2xlg_A SLL1785 protein, CUCA; 99.5 6.5E-14 2.2E-18 120.2 9.6 118 55-176 7-137 (239)
36 1lr5_A Auxin binding protein 1 99.5 2.8E-13 9.6E-18 108.4 12.7 117 94-215 40-158 (163)
37 3l2h_A Putative sugar phosphat 99.5 1.5E-13 5.1E-18 109.8 10.4 85 94-186 45-131 (162)
38 1v70_A Probable antibiotics sy 99.4 3.6E-13 1.2E-17 98.0 9.4 78 92-177 25-102 (105)
39 2fqp_A Hypothetical protein BP 99.4 2.7E-13 9.2E-18 99.7 8.6 78 93-176 16-93 (97)
40 2oa2_A BH2720 protein; 1017534 99.4 1.9E-12 6.3E-17 102.3 13.9 85 93-179 41-125 (148)
41 3ibm_A Cupin 2, conserved barr 99.4 3.3E-12 1.1E-16 103.4 13.8 117 53-179 12-132 (167)
42 3i7d_A Sugar phosphate isomera 99.4 1.2E-12 4E-17 105.6 10.8 86 93-186 41-129 (163)
43 1x82_A Glucose-6-phosphate iso 99.4 3.1E-12 1.1E-16 105.7 13.5 83 94-179 66-156 (190)
44 3es1_A Cupin 2, conserved barr 99.4 1.6E-12 5.5E-17 106.4 10.1 80 93-181 77-156 (172)
45 2gu9_A Tetracenomycin polyketi 99.4 2.1E-12 7E-17 95.7 9.9 78 93-178 19-98 (113)
46 3ht1_A REMF protein; cupin fol 99.4 1.9E-12 6.5E-17 100.4 9.2 84 93-183 37-120 (145)
47 3lag_A Uncharacterized protein 99.4 4.1E-13 1.4E-17 99.8 5.1 79 92-175 14-92 (98)
48 4e2g_A Cupin 2 conserved barre 99.3 3.2E-12 1.1E-16 97.3 8.8 78 92-179 38-115 (126)
49 2b8m_A Hypothetical protein MJ 99.3 8.8E-12 3E-16 93.9 10.9 74 94-176 26-100 (117)
50 3kgz_A Cupin 2 conserved barre 99.3 5.3E-12 1.8E-16 101.4 10.0 79 93-180 42-120 (156)
51 1o4t_A Putative oxalate decarb 99.3 4.4E-12 1.5E-16 98.4 9.2 77 92-176 54-130 (133)
52 3fjs_A Uncharacterized protein 99.3 3.4E-12 1.2E-16 96.8 8.0 74 92-174 33-106 (114)
53 2bnm_A Epoxidase; oxidoreducta 99.3 1.1E-11 3.9E-16 101.5 11.1 82 90-176 112-197 (198)
54 3jzv_A Uncharacterized protein 99.3 1.1E-11 3.7E-16 100.6 10.5 78 93-179 51-128 (166)
55 3cew_A Uncharacterized cupin p 99.3 9.8E-12 3.4E-16 94.8 8.7 80 92-179 23-103 (125)
56 2pfw_A Cupin 2, conserved barr 99.3 1.4E-11 4.6E-16 92.3 9.1 76 94-180 33-108 (116)
57 2f4p_A Hypothetical protein TM 99.3 3.2E-11 1.1E-15 95.3 11.7 78 92-178 45-123 (147)
58 1vj2_A Novel manganese-contain 99.3 1E-11 3.5E-16 95.3 8.0 77 92-177 45-121 (126)
59 2o8q_A Hypothetical protein; c 99.3 1.9E-11 6.6E-16 94.1 9.1 78 95-180 43-120 (134)
60 2ozi_A Hypothetical protein RP 99.3 5.6E-12 1.9E-16 93.9 5.7 78 94-176 16-93 (98)
61 4i4a_A Similar to unknown prot 99.3 3.7E-11 1.3E-15 91.6 10.5 75 93-176 32-106 (128)
62 2vpv_A Protein MIF2, MIF2P; nu 99.2 2.3E-11 7.7E-16 99.0 9.1 75 94-176 87-162 (166)
63 1yhf_A Hypothetical protein SP 99.2 4.7E-11 1.6E-15 89.2 9.7 73 93-176 38-110 (115)
64 1rc6_A Hypothetical protein YL 99.2 2.7E-11 9.3E-16 104.2 9.3 78 92-177 176-254 (261)
65 1y9q_A Transcriptional regulat 99.2 3.8E-11 1.3E-15 98.1 9.3 78 90-177 99-178 (192)
66 2q30_A Uncharacterized protein 99.2 9.1E-11 3.1E-15 86.6 8.9 77 92-177 30-107 (110)
67 3h7j_A Bacilysin biosynthesis 99.2 5.3E-11 1.8E-15 101.4 8.6 79 94-181 144-223 (243)
68 1sef_A Conserved hypothetical 99.2 1.1E-09 3.7E-14 94.9 16.2 108 56-176 146-256 (274)
69 2ozj_A Cupin 2, conserved barr 99.1 2.5E-10 8.7E-15 85.4 9.9 72 94-176 37-108 (114)
70 1y3t_A Hypothetical protein YX 99.1 1.7E-10 5.9E-15 101.4 9.9 78 93-179 44-121 (337)
71 2d40_A Z3393, putative gentisa 99.1 2.5E-10 8.6E-15 102.8 11.1 77 93-177 98-174 (354)
72 2d40_A Z3393, putative gentisa 99.1 4.9E-10 1.7E-14 100.9 12.6 89 75-176 249-338 (354)
73 1juh_A Quercetin 2,3-dioxygena 99.1 6.7E-10 2.3E-14 99.7 12.8 81 94-179 47-130 (350)
74 1sfn_A Conserved hypothetical 99.1 1.4E-09 4.8E-14 93.0 12.6 76 92-176 162-238 (246)
75 3d82_A Cupin 2, conserved barr 99.1 2.5E-10 8.7E-15 83.0 6.7 69 91-173 29-97 (102)
76 1y3t_A Hypothetical protein YX 99.1 1.7E-09 5.7E-14 95.1 13.0 75 97-180 219-294 (337)
77 3lwc_A Uncharacterized protein 99.1 5E-10 1.7E-14 85.9 8.4 73 94-177 39-111 (119)
78 3h7j_A Bacilysin biosynthesis 99.0 3.9E-10 1.3E-14 96.0 8.2 74 95-177 34-108 (243)
79 1sq4_A GLXB, glyoxylate-induce 99.0 4.7E-10 1.6E-14 97.8 8.5 77 92-177 65-143 (278)
80 1rc6_A Hypothetical protein YL 99.0 4.9E-10 1.7E-14 96.3 8.5 77 93-177 57-134 (261)
81 2i45_A Hypothetical protein; n 99.0 4.7E-10 1.6E-14 83.1 6.7 68 97-174 30-97 (107)
82 3bu7_A Gentisate 1,2-dioxygena 99.0 1.6E-09 5.4E-14 99.0 10.8 78 92-177 120-198 (394)
83 2pyt_A Ethanolamine utilizatio 99.0 7.8E-10 2.7E-14 86.5 7.5 72 94-178 56-127 (133)
84 4b29_A Dimethylsulfoniopropion 99.0 1.4E-09 4.8E-14 91.7 9.5 77 92-177 129-205 (217)
85 2opk_A Hypothetical protein; p 99.0 2.6E-09 8.9E-14 80.6 9.9 79 92-177 28-109 (112)
86 1sef_A Conserved hypothetical 99.0 8.5E-10 2.9E-14 95.6 8.2 76 93-176 60-136 (274)
87 3nw4_A Gentisate 1,2-dioxygena 99.0 1.1E-09 3.6E-14 99.3 8.9 78 92-177 100-177 (368)
88 3rns_A Cupin 2 conserved barre 99.0 1.6E-09 5.4E-14 91.4 8.9 73 94-176 152-224 (227)
89 4e2q_A Ureidoglycine aminohydr 99.0 2.5E-09 8.6E-14 92.9 10.2 104 53-176 38-141 (266)
90 4h7l_A Uncharacterized protein 98.9 7.9E-09 2.7E-13 83.2 11.8 71 95-179 47-119 (157)
91 3bu7_A Gentisate 1,2-dioxygena 98.9 5.5E-09 1.9E-13 95.4 12.2 92 75-176 275-367 (394)
92 3rns_A Cupin 2 conserved barre 98.9 3.2E-09 1.1E-13 89.5 9.8 73 94-177 36-108 (227)
93 1sq4_A GLXB, glyoxylate-induce 98.9 4.7E-09 1.6E-13 91.4 11.1 82 88-177 184-265 (278)
94 4e2q_A Ureidoglycine aminohydr 98.9 2.8E-08 9.5E-13 86.4 15.3 85 77-174 172-257 (266)
95 1vr3_A Acireductone dioxygenas 98.9 3.4E-08 1.2E-12 81.9 13.0 84 96-184 75-168 (191)
96 4axo_A EUTQ, ethanolamine util 98.9 6.5E-09 2.2E-13 83.2 8.0 73 94-179 65-137 (151)
97 1dgw_Y Canavalin; duplicated s 98.7 8.6E-08 2.9E-12 70.7 10.0 75 140-219 4-82 (93)
98 2q1z_B Anti-sigma factor CHRR, 98.7 4.5E-08 1.5E-12 81.1 9.4 71 94-177 124-194 (195)
99 3ebr_A Uncharacterized RMLC-li 98.7 4.2E-08 1.4E-12 79.0 8.7 73 94-177 41-115 (159)
100 1sfn_A Conserved hypothetical 98.7 3.4E-08 1.2E-12 84.3 7.9 71 93-176 48-118 (246)
101 1juh_A Quercetin 2,3-dioxygena 98.7 1.2E-07 4.2E-12 84.9 11.6 83 86-177 240-325 (350)
102 1o5u_A Novel thermotoga mariti 98.7 3.8E-08 1.3E-12 73.3 6.5 62 99-170 35-96 (101)
103 1zrr_A E-2/E-2' protein; nicke 98.6 1.8E-08 6.3E-13 82.7 4.1 70 108-183 93-162 (179)
104 3bcw_A Uncharacterized protein 98.6 6.8E-08 2.3E-12 74.5 6.3 67 94-169 48-114 (123)
105 3cjx_A Protein of unknown func 98.6 1.4E-07 4.8E-12 76.4 8.3 74 94-177 42-117 (165)
106 2y0o_A Probable D-lyxose ketol 98.6 3.3E-07 1.1E-11 74.9 10.3 85 95-181 53-156 (175)
107 2o1q_A Putative acetyl/propion 98.6 5.7E-08 2E-12 76.7 5.5 77 94-179 43-120 (145)
108 3eqe_A Putative cystein deoxyg 98.5 1.4E-06 4.8E-11 70.9 13.2 86 94-181 68-156 (171)
109 3st7_A Capsular polysaccharide 98.5 1.3E-06 4.5E-11 77.1 11.7 77 96-176 273-353 (369)
110 1yfu_A 3-hydroxyanthranilate-3 98.5 1.4E-06 4.7E-11 70.9 10.7 61 101-166 41-101 (174)
111 3nw4_A Gentisate 1,2-dioxygena 98.4 1.7E-06 5.9E-11 78.3 11.7 87 76-175 260-348 (368)
112 3d0j_A Uncharacterized protein 98.3 1.1E-06 3.8E-11 69.1 7.5 73 103-177 37-109 (140)
113 3o14_A Anti-ecfsigma factor, C 98.3 3E-06 1E-10 71.7 10.4 70 94-178 42-111 (223)
114 2gm6_A Cysteine dioxygenase ty 98.3 5.8E-06 2E-10 69.2 12.0 84 94-178 78-167 (208)
115 3bal_A Acetylacetone-cleaving 98.3 1.1E-06 3.7E-11 70.4 6.2 64 93-163 44-107 (153)
116 1zvf_A 3-hydroxyanthranilate 3 98.2 1.3E-05 4.5E-10 65.1 10.4 62 103-165 42-103 (176)
117 2arc_A ARAC, arabinose operon 98.2 9.7E-06 3.3E-10 63.0 9.2 58 109-175 32-90 (164)
118 3eln_A Cysteine dioxygenase ty 98.1 4.4E-05 1.5E-09 63.4 13.2 89 94-182 69-163 (200)
119 2qnk_A 3-hydroxyanthranilate 3 98.0 2.4E-05 8.2E-10 68.0 9.2 66 103-175 39-104 (286)
120 3myx_A Uncharacterized protein 97.8 0.00012 4E-09 62.5 10.6 73 93-177 45-117 (238)
121 2pa7_A DTDP-6-deoxy-3,4-keto-h 97.8 8.9E-05 3E-09 58.4 8.9 96 76-179 17-114 (141)
122 3uss_A Putative uncharacterize 97.7 0.00085 2.9E-08 56.1 13.4 84 94-179 72-162 (211)
123 3ejk_A DTDP sugar isomerase; Y 97.7 0.00039 1.3E-08 56.5 11.0 76 101-176 59-140 (174)
124 3es4_A Uncharacterized protein 97.6 0.00029 9.8E-09 53.7 8.2 62 95-165 42-103 (116)
125 3myx_A Uncharacterized protein 97.3 0.001 3.5E-08 56.7 9.5 63 94-165 166-228 (238)
126 3gbg_A TCP pilus virulence reg 97.3 0.001 3.5E-08 56.2 8.7 65 94-165 6-72 (276)
127 2vec_A YHAK, pirin-like protei 97.2 0.0018 6.2E-08 55.6 9.3 72 97-175 66-140 (256)
128 3o14_A Anti-ecfsigma factor, C 97.0 0.0019 6.3E-08 54.4 7.5 79 75-175 133-211 (223)
129 1tq5_A Protein YHHW; bicupin, 96.9 0.006 2E-07 51.9 9.7 73 96-175 42-117 (242)
130 1yud_A Hypothetical protein SO 96.7 0.019 6.6E-07 46.3 11.2 131 74-217 27-165 (170)
131 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 96.7 0.015 5.1E-07 47.6 10.6 70 103-173 56-132 (185)
132 4gjz_A Lysine-specific demethy 96.6 0.0044 1.5E-07 50.7 7.2 68 99-167 127-226 (235)
133 3ryk_A DTDP-4-dehydrorhamnose 96.6 0.014 4.9E-07 48.5 10.2 71 103-173 78-156 (205)
134 1vrb_A Putative asparaginyl hy 96.6 0.015 5.1E-07 51.7 10.9 73 100-173 145-249 (342)
135 3bb6_A Uncharacterized protein 96.6 0.012 4.2E-07 45.3 8.9 72 103-177 22-99 (127)
136 2ixk_A DTDP-4-dehydrorhamnose 96.6 0.019 6.5E-07 46.9 10.5 70 103-173 57-133 (184)
137 1wlt_A 176AA long hypothetical 96.3 0.033 1.1E-06 45.9 10.6 69 103-172 73-149 (196)
138 1dzr_A DTDP-4-dehydrorhamnose 96.3 0.043 1.5E-06 44.7 11.2 70 103-173 55-132 (183)
139 3d8c_A Hypoxia-inducible facto 96.2 0.02 6.9E-07 50.9 9.2 75 100-175 187-295 (349)
140 1oi6_A PCZA361.16; epimerase, 96.1 0.056 1.9E-06 44.8 10.8 70 103-173 55-132 (205)
141 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 96.1 0.036 1.2E-06 45.7 9.5 69 103-173 68-139 (197)
142 2c0z_A NOVW; isomerase, epimer 96.0 0.056 1.9E-06 45.2 10.6 70 103-173 63-140 (216)
143 1upi_A DTDP-4-dehydrorhamnose 95.9 0.087 3E-06 44.3 11.3 67 103-169 74-148 (225)
144 3kmh_A D-lyxose isomerase; cup 95.9 0.053 1.8E-06 46.0 9.8 84 95-179 106-209 (246)
145 2xdv_A MYC-induced nuclear ant 95.5 0.056 1.9E-06 49.7 9.4 66 100-166 143-223 (442)
146 4hn1_A Putative 3-epimerase in 95.5 0.11 3.6E-06 43.1 10.1 71 103-173 52-130 (201)
147 3al5_A HTYW5, JMJC domain-cont 95.5 0.043 1.5E-06 48.4 8.1 74 99-175 170-271 (338)
148 4diq_A Lysine-specific demethy 95.4 0.12 4.2E-06 48.1 11.3 71 99-170 167-256 (489)
149 1e5r_A Proline oxidase; oxidor 95.3 0.019 6.6E-07 50.1 5.1 75 95-173 91-171 (290)
150 3rcq_A Aspartyl/asparaginyl be 95.2 0.094 3.2E-06 43.2 8.7 90 84-182 90-185 (197)
151 2p17_A Pirin-like protein; GK1 95.1 0.12 4E-06 44.7 9.5 68 101-175 45-114 (277)
152 2qjv_A Uncharacterized IOLB-li 95.0 0.19 6.7E-06 43.3 10.4 81 94-178 152-247 (270)
153 3k2o_A Bifunctional arginine d 94.9 0.095 3.3E-06 46.5 8.5 69 100-168 176-282 (336)
154 2qdr_A Uncharacterized protein 94.9 0.18 6.2E-06 43.4 9.8 73 91-176 87-160 (303)
155 1eyb_A Homogentisate 1,2-dioxy 94.4 0.12 4.1E-06 47.8 8.2 58 108-175 170-227 (471)
156 3kv5_D JMJC domain-containing 94.4 0.072 2.5E-06 49.7 6.8 68 100-167 270-361 (488)
157 1j1l_A Pirin; beta sandwich, c 94.1 0.28 9.4E-06 42.6 9.5 91 76-175 21-116 (290)
158 2yu1_A JMJC domain-containing 94.0 0.13 4.3E-06 47.6 7.5 68 101-168 201-292 (451)
159 3kv4_A PHD finger protein 8; e 93.9 0.15 5.2E-06 47.0 7.9 69 100-168 235-327 (447)
160 3k3o_A PHF8, PHD finger protei 93.5 0.13 4.5E-06 46.3 6.5 68 100-167 151-242 (371)
161 3kv9_A JMJC domain-containing 93.0 0.19 6.4E-06 45.7 6.8 68 100-167 179-270 (397)
162 3pua_A GRC5, PHD finger protei 92.5 0.25 8.6E-06 44.8 6.8 65 103-167 182-269 (392)
163 2qnk_A 3-hydroxyanthranilate 3 92.2 0.41 1.4E-05 41.5 7.5 52 102-164 214-266 (286)
164 2oyz_A UPF0345 protein VPA0057 92.1 0.81 2.8E-05 33.2 7.8 44 115-164 40-83 (94)
165 2rg4_A Uncharacterized protein 91.7 0.59 2E-05 38.6 7.8 80 97-177 105-204 (216)
166 1xru_A 4-deoxy-L-threo-5-hexos 91.4 2 6.9E-05 37.1 11.0 81 94-180 179-266 (282)
167 3pur_A Lysine-specific demethy 90.9 0.3 1E-05 45.8 5.7 67 101-167 301-391 (528)
168 1pmi_A PMI, phosphomannose iso 89.9 1.2 4.1E-05 40.8 8.7 76 94-176 356-437 (440)
169 3hqx_A UPF0345 protein aciad03 89.9 1.8 6.2E-05 32.3 8.1 66 102-176 44-109 (111)
170 1ywk_A 4-deoxy-L-threo-5-hexos 89.0 1.8 6.3E-05 37.5 8.8 81 94-180 179-266 (289)
171 1qwr_A Mannose-6-phosphate iso 88.6 1.8 6E-05 37.9 8.6 58 94-162 250-307 (319)
172 2wfp_A Mannose-6-phosphate iso 87.7 0.71 2.4E-05 41.7 5.5 58 94-162 323-380 (394)
173 3dl3_A Tellurite resistance pr 87.6 3.1 0.00011 31.4 8.2 70 106-179 27-99 (119)
174 1tq5_A Protein YHHW; bicupin, 87.4 3.4 0.00012 34.7 9.3 67 93-173 158-224 (242)
175 3eo6_A Protein of unknown func 86.1 1.5 5E-05 32.5 5.5 47 112-164 50-96 (106)
176 2pqq_A Putative transcriptiona 84.9 2.3 7.9E-05 30.9 6.3 53 97-152 28-80 (149)
177 1zx5_A Mannosephosphate isomer 84.1 4.8 0.00016 34.8 8.8 57 94-163 229-286 (300)
178 2ypd_A Probable JMJC domain-co 83.7 1.2 3.9E-05 40.3 4.8 42 139-180 290-331 (392)
179 2vec_A YHAK, pirin-like protei 82.5 7.3 0.00025 33.0 9.2 71 93-173 180-250 (256)
180 3dn7_A Cyclic nucleotide bindi 82.5 4.5 0.00015 31.1 7.4 52 98-153 31-83 (194)
181 3mdp_A Cyclic nucleotide-bindi 82.5 2.3 7.9E-05 30.7 5.4 53 97-153 29-85 (142)
182 2p17_A Pirin-like protein; GK1 82.3 5.6 0.00019 34.0 8.4 55 93-157 165-220 (277)
183 2oz6_A Virulence factor regula 82.0 4.8 0.00016 31.1 7.4 53 98-153 14-66 (207)
184 4ev0_A Transcription regulator 81.1 4.4 0.00015 31.6 6.9 118 98-221 23-188 (216)
185 3fx3_A Cyclic nucleotide-bindi 80.9 4.9 0.00017 31.9 7.3 52 98-152 35-86 (237)
186 3ryp_A Catabolite gene activat 80.7 5.5 0.00019 30.8 7.4 53 98-153 20-72 (210)
187 3gyd_A CNMP-BD protein, cyclic 80.5 5.3 0.00018 30.9 7.2 53 97-152 62-114 (187)
188 1j1l_A Pirin; beta sandwich, c 80.5 6.1 0.00021 34.0 8.1 75 93-175 167-241 (290)
189 3e97_A Transcriptional regulat 80.4 5.1 0.00017 31.7 7.2 54 97-153 29-82 (231)
190 3iwz_A CAP-like, catabolite ac 79.5 5.3 0.00018 31.4 7.0 53 98-153 35-87 (230)
191 3d0s_A Transcriptional regulat 79.4 5.9 0.0002 31.2 7.2 53 98-153 30-82 (227)
192 1zyb_A Transcription regulator 78.2 4.7 0.00016 32.2 6.4 119 97-221 43-211 (232)
193 2fmy_A COOA, carbon monoxide o 77.9 7.8 0.00027 30.4 7.5 116 97-221 27-192 (220)
194 3b02_A Transcriptional regulat 77.8 5.2 0.00018 30.9 6.3 51 101-154 3-53 (195)
195 2z69_A DNR protein; beta barre 77.4 2.1 7.3E-05 31.4 3.7 53 97-152 35-87 (154)
196 1qwr_A Mannose-6-phosphate iso 77.0 4.1 0.00014 35.5 6.0 47 116-162 117-178 (319)
197 3idb_B CAMP-dependent protein 77.0 8.4 0.00029 28.6 7.2 52 97-152 61-112 (161)
198 1zx5_A Mannosephosphate isomer 76.8 1.8 6.3E-05 37.4 3.6 47 117-163 118-179 (300)
199 1xe7_A YML079WP, hypothetical 76.8 29 0.001 28.3 11.3 109 96-218 80-199 (203)
200 3la7_A Global nitrogen regulat 76.7 6.6 0.00023 31.6 6.9 62 89-153 35-96 (243)
201 3kcc_A Catabolite gene activat 76.6 7.7 0.00026 31.6 7.4 53 98-153 70-122 (260)
202 2gau_A Transcriptional regulat 75.6 4.5 0.00016 32.0 5.5 119 97-221 33-205 (232)
203 1o5l_A Transcriptional regulat 75.5 5.2 0.00018 31.4 5.8 53 97-152 22-74 (213)
204 3dv8_A Transcriptional regulat 74.7 7.8 0.00027 30.2 6.6 118 98-221 27-194 (220)
205 3e6c_C CPRK, cyclic nucleotide 74.2 7.7 0.00026 31.2 6.7 119 97-221 32-202 (250)
206 2zcw_A TTHA1359, transcription 74.0 6.8 0.00023 30.3 6.1 117 99-221 7-171 (202)
207 1ft9_A Carbon monoxide oxidati 73.4 18 0.00062 28.2 8.6 116 97-221 23-188 (222)
208 3loi_A Putative uncharacterize 71.1 37 0.0013 27.0 12.5 108 95-218 53-169 (172)
209 2bgc_A PRFA; bacterial infecti 69.9 13 0.00043 29.7 7.0 117 99-221 20-195 (238)
210 2xxz_A Lysine-specific demethy 68.6 5 0.00017 35.4 4.4 35 139-173 276-310 (332)
211 2wfp_A Mannose-6-phosphate iso 67.7 4.2 0.00014 36.6 3.9 23 141-163 239-261 (394)
212 3m3i_A Putative uncharacterize 64.5 61 0.0021 26.9 13.5 114 96-219 61-212 (225)
213 2ptm_A Hyperpolarization-activ 63.6 14 0.00048 28.5 5.9 49 97-152 94-142 (198)
214 2qjv_A Uncharacterized IOLB-li 62.1 70 0.0024 27.2 10.3 67 95-173 29-106 (270)
215 2qcs_B CAMP-dependent protein 62.1 26 0.00089 28.5 7.5 54 97-152 180-233 (291)
216 3bpz_A Potassium/sodium hyperp 59.3 16 0.00056 28.3 5.5 48 97-152 95-142 (202)
217 4f8a_A Potassium voltage-gated 57.1 29 0.00099 25.1 6.4 48 98-154 51-99 (160)
218 4ava_A Lysine acetyltransferas 57.1 21 0.00071 29.9 6.2 51 97-152 36-87 (333)
219 3shr_A CGMP-dependent protein 54.4 25 0.00084 28.9 6.1 53 97-152 180-233 (299)
220 1pmi_A PMI, phosphomannose iso 54.1 10 0.00035 34.6 3.9 21 143-163 267-287 (440)
221 3avr_A Lysine-specific demethy 54.0 15 0.00053 34.3 5.1 35 139-173 335-369 (531)
222 3dkw_A DNR protein; CRP-FNR, H 54.0 4.5 0.00015 31.8 1.4 54 98-154 33-86 (227)
223 4ask_A Lysine-specific demethy 53.6 13 0.00044 34.7 4.4 33 140-172 311-343 (510)
224 1znp_A Hypothetical protein AT 53.4 78 0.0027 24.7 12.0 87 74-166 20-115 (154)
225 3tnp_B CAMP-dependent protein 50.6 44 0.0015 29.5 7.5 52 97-152 168-219 (416)
226 3pna_A CAMP-dependent protein 49.4 43 0.0015 24.3 6.3 48 97-152 61-108 (154)
227 3g7d_A PHPD; non heme Fe(II) d 48.4 63 0.0022 28.8 7.8 45 120-170 358-402 (443)
228 2d93_A RAP guanine nucleotide 48.0 23 0.00079 25.2 4.4 48 97-152 39-87 (134)
229 3ocp_A PRKG1 protein; serine/t 47.8 49 0.0017 23.4 6.2 48 97-152 46-93 (139)
230 1vp6_A CNBD, cyclic-nucleotide 45.5 22 0.00076 25.1 4.0 45 98-152 35-79 (138)
231 1xsq_A Ureidoglycolate hydrola 45.1 48 0.0017 26.1 6.1 67 109-175 70-139 (168)
232 1o7f_A CAMP-dependent RAP1 gua 45.1 38 0.0013 29.8 6.1 56 97-154 65-121 (469)
233 1s4c_A Protein HI0227; double- 43.9 46 0.0016 25.4 5.7 57 108-164 60-134 (155)
234 2bdr_A Ureidoglycolate hydrola 43.7 58 0.002 25.8 6.4 67 109-175 72-141 (175)
235 3ukn_A Novel protein similar t 42.0 37 0.0013 26.3 5.0 50 96-153 97-146 (212)
236 4f7z_A RAP guanine nucleotide 37.9 69 0.0023 31.6 7.3 56 96-153 64-120 (999)
237 3of1_A CAMP-dependent protein 36.7 34 0.0012 26.7 4.1 47 98-152 31-77 (246)
238 3tnp_B CAMP-dependent protein 33.1 65 0.0022 28.4 5.7 55 97-152 290-348 (416)
239 3of1_A CAMP-dependent protein 33.0 71 0.0024 24.8 5.5 49 97-152 148-196 (246)
240 2qcs_B CAMP-dependent protein 32.1 87 0.003 25.2 6.0 48 97-152 62-109 (291)
241 1wgp_A Probable cyclic nucleot 29.9 11 0.00036 27.0 -0.1 49 100-152 32-82 (137)
242 3shr_A CGMP-dependent protein 27.9 95 0.0033 25.2 5.6 48 97-152 62-109 (299)
243 3g7d_A PHPD; non heme Fe(II) d 26.6 2.4E+02 0.0082 25.1 7.9 73 143-217 156-264 (443)
244 1ywk_A 4-deoxy-L-threo-5-hexos 24.9 3.3E+02 0.011 23.3 8.7 66 100-173 62-130 (289)
245 2qn4_A RASI, alpha-amylase/sub 24.3 20 0.00069 29.1 0.6 29 1-30 1-29 (200)
246 4din_B CAMP-dependent protein 24.2 1.2E+02 0.0039 26.2 5.6 51 100-152 274-324 (381)
247 1eyb_A Homogentisate 1,2-dioxy 24.0 80 0.0027 29.1 4.6 51 99-161 347-398 (471)
248 1pcq_O Groes protein; chaperon 23.8 1.6E+02 0.0056 20.9 5.4 20 139-158 52-71 (97)
249 1yll_A PA5104, conserved hypot 22.2 82 0.0028 25.4 3.9 35 116-157 140-174 (200)
250 2dkz_A Hypothetical protein LO 21.7 59 0.002 22.8 2.5 31 186-219 45-75 (84)
251 3dkq_A PKHD-type hydroxylase S 21.4 1E+02 0.0034 25.6 4.4 22 143-164 159-180 (243)
252 1o7f_A CAMP-dependent RAP1 gua 21.0 1.5E+02 0.005 25.9 5.7 46 100-152 364-409 (469)
253 1tc3_C Protein (TC3 transposas 20.5 90 0.0031 17.4 3.0 26 196-221 21-46 (51)
254 1xru_A 4-deoxy-L-threo-5-hexos 20.4 1.1E+02 0.0039 26.1 4.6 50 116-173 78-130 (282)
No 1
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=100.00 E-value=2.9e-51 Score=343.66 Aligned_cols=198 Identities=47% Similarity=0.798 Sum_probs=185.8
Q ss_pred cCCCCCcceEeeccCCCCc-ceecCcccCCCCCCCCCCeeeec-CCCCCCccCCCCeeEEEccccccCcccccceEEEEE
Q 048097 23 YDPSPLQDICVAIIDHKDG-VFVNGKFCKDPKLAKAEDFFLSG-LDKPGNTENRLGFNVTNANVEQIPGLNTLGTSAVRI 100 (224)
Q Consensus 23 ~d~~~~~dfcv~~~~~~~~-~~~~g~~ck~p~~~~~~df~f~~-~~~~~~~~~~~g~~v~~~~~~~~p~L~~lgis~~~v 100 (224)
+|||+||||||| |++++ +++|||||| |+.++++||+|++ +.+++++.|..|++++.++..++|+++++|++++++
T Consensus 1 ~~~~~~~d~c~~--~~~~~~~~~~g~~c~-~~~~~~~df~~~~~~~~~~~~~~~~G~~v~~~~~~~~p~l~~~~~~~~~~ 77 (201)
T 1fi2_A 1 TDPDPLQDFCVA--DLDGKAVSVNGHTCK-PMSEAGDDFLFSSKLTKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRV 77 (201)
T ss_dssp CCCCCSSSCCCB--CCCTTSCCCSSCCBC-CGGGCCSCTTCCCTTSSCCCCCSTTSEEEEEESTTTCGGGTTSSCEEEEE
T ss_pred CCCcccceeEEe--cCCCCcccccCcccc-cCcccccceEEeeeecCCCCccCCCCcEEEEEecccCCCcccCceEEEEE
Confidence 699999999999 99888 999999999 9999999999999 999998888999999999999999999999999999
Q ss_pred EEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEEEEEeCCC
Q 048097 101 DYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAFAGFSSQF 180 (224)
Q Consensus 101 ~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l~~~~s~~ 180 (224)
+++||++.++|||++++|++||++|++++++.+.++++++++++.|++||+++||+|.+|++.|.|++++++++++++++
T Consensus 78 ~l~pg~~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~~~~~~~~~~~l~~GD~~~iP~g~~H~~~N~g~~~~~~l~v~~~~~ 157 (201)
T 1fi2_A 78 DFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQN 157 (201)
T ss_dssp EECTTCEEEEEECTTCCEEEEEEESEEEEEEECCGGGTTCEEEEEEETTCEEEECTTCCEEEEECSSSCEEEEEEESSSC
T ss_pred EECCCCCCCCeECCCCCEEEEEEeCEEEEEEEcCCCCCCeEEEEEECCCCEEEECCCCeEEEEeCCCCCEEEEEEECCCC
Confidence 99999999999999989999999999999997542101466679999999999999999999999999999999999999
Q ss_pred CceeechhhhhcCCCCCCHHHHHhhcCCCHHHHHHhhhhhcCC
Q 048097 181 PGVITIADTVFGANPPINPDFLGKAFQLDPKIVKDLQDKFING 223 (224)
Q Consensus 181 pg~~~~~~~lf~~~p~~p~~vLa~af~~~~~~v~~l~~~~~~~ 223 (224)
|+.+.++.++|+++|++++++|+++|+++++++++|+++|+++
T Consensus 158 p~~~~~~~~~~~~~~~~~~~vl~~af~~~~~~v~~l~~~~~~~ 200 (201)
T 1fi2_A 158 PGIVFVPLTLFGSDPPIPTPVLTKALRVEAGVVELLKSKFAGG 200 (201)
T ss_dssp CCCEEHHHHHHHCSSCCCHHHHHHHHTSCHHHHHHHHHHSTTC
T ss_pred CCeEehhhHHhcCCCCCCHHHHHHHHCcCHHHHHHHHHhhcCC
Confidence 9999999999999888999999999999999999999999765
No 2
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=100.00 E-value=3.5e-33 Score=259.74 Aligned_cols=153 Identities=15% Similarity=0.147 Sum_probs=138.2
Q ss_pred eeecCC-CCCCccCCCCeeEEEccccccCcccccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCC
Q 048097 61 FLSGLD-KPGNTENRLGFNVTNANVEQIPGLNTLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNN 139 (224)
Q Consensus 61 ~f~~~~-~~~~~~~~~g~~v~~~~~~~~p~L~~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~ 139 (224)
.|+... ..+++.+..|++++.+++.+||+|+++||++++++|.|||+++|||||+|+||+||++|+++++|+++++ +
T Consensus 288 ~~Ni~~p~~~d~~~~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g--~ 365 (466)
T 3kgl_A 288 TDNLDDPSNADVYKPQLGYISTLNSYDLPILRFLRLSALRGSIRQNAMVLPQWNANANAVLYVTDGEAHVQVVNDNG--D 365 (466)
T ss_dssp EEETTCGGGEEEEETTTEEEEEECTTTCTTHHHHTCEEEEEEEETTEEEEEEEESSCCEEEEEEESEEEEEEECTTS--C
T ss_pred cccccCcccCCcccCCCceEEEechhhCcccccCceeeEEEEeecCcEeeeeECCCCCEEEEEEeceEEEEEEeCCC--c
Confidence 455542 2333336778899999999999999999999999999999999999999999999999999999999874 7
Q ss_pred eeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEEEEEeCCCCceeech--hhhhcCCCCCCHHHHHhhcCCCHHHHHHhh
Q 048097 140 TLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAFAGFSSQFPGVITIA--DTVFGANPPINPDFLGKAFQLDPKIVKDLQ 217 (224)
Q Consensus 140 k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l~~~~s~~pg~~~~~--~~lf~~~p~~p~~vLa~af~~~~~~v~~l~ 217 (224)
+++.++|++||+++||+|++|++ |.|++++.+++++++++|+.+.++ .++|+. +|++||+++|+++++++++|+
T Consensus 366 ~~f~~~l~~GDV~v~P~G~~H~~-~ag~e~~~~l~~f~s~np~~~~LaG~~s~~~~---lP~eVla~aF~v~~~~v~~Lk 441 (466)
T 3kgl_A 366 RVFDGQVSQGQLLSIPQGFSVVK-RATSEQFRWIEFKTNANAQINTLAGRTSVLRG---LPLEVISNGYQISLEEARRVK 441 (466)
T ss_dssp EEEEEEEETTCEEEECTTCEEEE-EECSSEEEEEEEESSSSCCEEESSSTTCTGGG---SCHHHHHHHHTCCHHHHHHHH
T ss_pred EEEEeEecCCcEEEECCCCeEEE-EcCCCCEEEEEEECCCCCccccccchhhhhhh---CCHHHHHHHhCcCHHHHHHHH
Confidence 88999999999999999999999 789999999999999999999997 577884 999999999999999999999
Q ss_pred hh
Q 048097 218 DK 219 (224)
Q Consensus 218 ~~ 219 (224)
++
T Consensus 442 ~~ 443 (466)
T 3kgl_A 442 FN 443 (466)
T ss_dssp HS
T ss_pred hc
Confidence 85
No 3
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=99.98 E-value=2e-32 Score=254.57 Aligned_cols=147 Identities=15% Similarity=0.140 Sum_probs=136.2
Q ss_pred CCCCccCCCCeeEEEccccccCcccccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEe
Q 048097 67 KPGNTENRLGFNVTNANVEQIPGLNTLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVL 146 (224)
Q Consensus 67 ~~~~~~~~~g~~v~~~~~~~~p~L~~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l 146 (224)
..+++.++.|++++.+++.+||+|+++||++++++|.|||+++|||||+|+||+||++|+++++|+++++ ++++.++|
T Consensus 295 ~~~dv~~~~gG~v~~~~~~~fP~L~~lgiS~a~v~l~pGgm~~PHwHp~A~Ei~yV~~G~~~v~vV~~~g--~~~f~~~l 372 (465)
T 3qac_A 295 SKADVYTPEAGRLTTVNSFNLPILRHLRLSAAKGVLYRNAMMAPHYNLNAHNIMYCVRGRGRIQIVNDQG--QSVFDEEL 372 (465)
T ss_dssp TTCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTS--CEEEEEEE
T ss_pred ccCCcccCCCceEEEeCHHHCCCccccceeEEEEEecCCcEeeeEECCCCCEEEEEEeCCEEEEEEeCCC--cEEEEEEe
Confidence 4455557789999999999999999999999999999999999999999999999999999999999874 78899999
Q ss_pred cCCCEEEEcCCCeeEEEeCCCCcEEEEEEEeCCCCceeech--hhhhcCCCCCCHHHHHhhcCCCHHHHHHhhhh
Q 048097 147 NKGDVFVFPIGLIHFQVNIGKTSAVAFAGFSSQFPGVITIA--DTVFGANPPINPDFLGKAFQLDPKIVKDLQDK 219 (224)
Q Consensus 147 ~~GDv~v~P~G~~H~~~N~G~~~a~~l~~~~s~~pg~~~~~--~~lf~~~p~~p~~vLa~af~~~~~~v~~l~~~ 219 (224)
++||+++||+|++|++. .|++++.+++++++++|+.+.++ .++|+. +|++||+++|+++++++++|+++
T Consensus 373 ~~GDVfvvP~g~~h~~~-ag~e~~~~l~f~~s~np~~~~LaG~~sv~~~---ip~eVla~aF~v~~e~v~~Lk~~ 443 (465)
T 3qac_A 373 SRGQLVVVPQNFAIVKQ-AFEDGFEWVSFKTSENAMFQSLAGRTSAIRS---LPIDVVSNIYQISREEAFGLKFN 443 (465)
T ss_dssp ETTCEEEECTTCEEEEE-EEEEEEEEEEEESSTTCCEEESSSSSBHHHH---SCHHHHHHHHTCCHHHHHHHHHS
T ss_pred cCCeEEEECCCcEEEEE-cCCCCeEEEEEecCCCCcccccccchhhhhh---CCHHHHHHHhCCCHHHHHHHHhc
Confidence 99999999999999985 67889999999999999999997 678884 99999999999999999999986
No 4
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=99.98 E-value=5.2e-32 Score=253.57 Aligned_cols=154 Identities=18% Similarity=0.182 Sum_probs=137.6
Q ss_pred eeeecCC-CCCCccCCCCeeEEEccccccCcccccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCC
Q 048097 60 FFLSGLD-KPGNTENRLGFNVTNANVEQIPGLNTLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLN 138 (224)
Q Consensus 60 f~f~~~~-~~~~~~~~~g~~v~~~~~~~~p~L~~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~ 138 (224)
+.++..+ ..+++.+..|++++.+++.+||+|+++||++++++|.|||+++|||||+|+||+||++|+++++|+++++
T Consensus 322 l~~Ni~~p~~~di~~~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g-- 399 (496)
T 3ksc_A 322 LRLNIGPSSSPDIYNPEAGRIKTVTSLDLPVLRWLKLSAEHGSLHKNAMFVPHYNLNANSIIYALKGRARLQVVNCNG-- 399 (496)
T ss_dssp CEEECSTTSCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTS--
T ss_pred hhccccccccCCcccCCCeeEEEeCHHHCccccccceeEEEEEeeCCeEECCeeCCCCCEEEEEEeceEEEEEEeCCC--
Confidence 4555542 3344446778899999999999999999999999999999999999999999999999999999999874
Q ss_pred CeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEEEEEeCCCCceeech--hhhhcCCCCCCHHHHHhhcCCCHHHHHHh
Q 048097 139 NTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAFAGFSSQFPGVITIA--DTVFGANPPINPDFLGKAFQLDPKIVKDL 216 (224)
Q Consensus 139 ~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l~~~~s~~pg~~~~~--~~lf~~~p~~p~~vLa~af~~~~~~v~~l 216 (224)
++++.++|++||+++||+|++|++.|. ++++.+++++++++|+.+.++ .++|+ .+|++||+++|+++.+++++|
T Consensus 400 ~~~f~~~l~~GDV~v~P~G~~H~~~a~-~e~~~~l~f~~s~np~~~~LaG~~sv~~---~~p~eVLa~aF~v~~~~v~~L 475 (496)
T 3ksc_A 400 NTVFDGELEAGRALTVPQNYAVAAKSL-SDRFSYVAFKTNDRAGIARLAGTSSVIN---NLPLDVVAATFNLQRNEARQL 475 (496)
T ss_dssp CEEEEEEEETTCEEEECTTCEEEEEEC-SSEEEEEEEESSTTCCEEESSSTTCTTT---TSCHHHHHHHHTCCHHHHHHH
T ss_pred cEEEEEEecCCeEEEECCCCEEEEEeC-CCCEEEEEEECCCCCccccccchhhhhh---hCCHHHHHHHHCcCHHHHHHH
Confidence 788899999999999999999998775 788999999999999999987 56887 499999999999999999999
Q ss_pred hhh
Q 048097 217 QDK 219 (224)
Q Consensus 217 ~~~ 219 (224)
++.
T Consensus 476 k~~ 478 (496)
T 3ksc_A 476 KSN 478 (496)
T ss_dssp HHS
T ss_pred Hhc
Confidence 984
No 5
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.97 E-value=1.6e-31 Score=248.89 Aligned_cols=148 Identities=14% Similarity=0.142 Sum_probs=136.8
Q ss_pred CCCCccCCCCeeEEEccccccCcccccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEe
Q 048097 67 KPGNTENRLGFNVTNANVEQIPGLNTLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVL 146 (224)
Q Consensus 67 ~~~~~~~~~g~~v~~~~~~~~p~L~~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l 146 (224)
..+++.+..|++++.+++.+||+|+++|+++++++|.||++++|||||+|+||+||++|+++++++++++ ++++..+|
T Consensus 294 ~~~~~~~~~gG~v~~~~~~~fP~L~~l~iS~a~v~l~pG~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~~~g--~~~~~~~l 371 (459)
T 2e9q_A 294 ERADVFNPRGGRISTANYHTLPILRQVRLSAERGVLYSNAMVAPHYTVNSHSVMYATRGNARVQVVDNFG--QSVFDGEV 371 (459)
T ss_dssp SCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTS--CEEEEEEE
T ss_pred ccCCcccCCCeeEEEeccccCccccccccceEEEEeeCCcCccceECCCCCEEEEEEeeEEEEEEEeCCC--CEEEeeEE
Confidence 3444446788999999999999999999999999999999999999999999999999999999998774 78888899
Q ss_pred cCCCEEEEcCCCeeEEEeCCCCcEEEEEEEeCCCCceeech--hhhhcCCCCCCHHHHHhhcCCCHHHHHHhhhhh
Q 048097 147 NKGDVFVFPIGLIHFQVNIGKTSAVAFAGFSSQFPGVITIA--DTVFGANPPINPDFLGKAFQLDPKIVKDLQDKF 220 (224)
Q Consensus 147 ~~GDv~v~P~G~~H~~~N~G~~~a~~l~~~~s~~pg~~~~~--~~lf~~~p~~p~~vLa~af~~~~~~v~~l~~~~ 220 (224)
++||+++||+|++|++.| |++++.+++++++++|+.+.++ .++|+. +|++||+++|+++++++++|++..
T Consensus 372 ~~GDv~v~P~G~~H~~~n-g~~~~~~l~~~~s~~~~~~~laG~~s~~~~---~p~~Vla~af~v~~~~v~~l~~~~ 443 (459)
T 2e9q_A 372 REGQVLMIPQNFVVIKRA-SDRGFEWIAFKTNDNAITNLLAGRVSQMRM---LPLGVLSNMYRISREEAQRLKYGQ 443 (459)
T ss_dssp ETTCEEEECTTCEEEEEE-EEEEEEEEEEESSSSCCEEESSSSSSHHHH---SCHHHHHHHHTCCHHHHHHHHHSC
T ss_pred eCCcEEEECCCCEEEEEe-CCCCeEEEEEecCCCCcceeecchhHHHHh---CCHHHHHHHHCcCHHHHHHHHhcC
Confidence 999999999999999999 7889999999999999999998 678885 999999999999999999999864
No 6
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=99.97 E-value=4.3e-31 Score=247.77 Aligned_cols=153 Identities=20% Similarity=0.266 Sum_probs=134.8
Q ss_pred eeeecCC-CCCCccCCCCeeEEEccccccCcccccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCC
Q 048097 60 FFLSGLD-KPGNTENRLGFNVTNANVEQIPGLNTLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLN 138 (224)
Q Consensus 60 f~f~~~~-~~~~~~~~~g~~v~~~~~~~~p~L~~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~ 138 (224)
+.|+..+ ..+++.|+.|++++.+++.+||+|+++||++++++|+||++++|||||+|+||+||++|+++++++++++
T Consensus 358 l~~Ni~~ps~~d~~n~~GG~v~~a~~~~fP~L~~LgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~G-- 435 (531)
T 3fz3_A 358 LKENIGNPERADIFSPRAGRISTLNSHNLPILRFLRLSAERGFFYRNGIYSPHWNVNAHSVVYVIRGNARVQVVNENG-- 435 (531)
T ss_dssp CEEECCCGGGCSEEETTTEEEEEESTTTCTHHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTS--
T ss_pred eeeccCCcccCCcccCCCeEEEEeccccCCccccCceeEEEEEeecCccccceEcCCCCEEEEEEeCcEEEEEEeCCC--
Confidence 4666652 3445667889999999999999999999999999999999999999999999999999999999999863
Q ss_pred CeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEEEEE-eCCCCceeech--hhhhcCCCCCCHHHHHhhcCCCHHHHHH
Q 048097 139 NTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAFAGF-SSQFPGVITIA--DTVFGANPPINPDFLGKAFQLDPKIVKD 215 (224)
Q Consensus 139 ~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l~~~-~s~~pg~~~~~--~~lf~~~p~~p~~vLa~af~~~~~~v~~ 215 (224)
++++.++|++||+++||+|++|++. .|++.+.++ +| ++++|+...++ .++|++ +|++||+++|+++++++++
T Consensus 436 ~~v~~~~L~~GDV~v~P~G~~H~~~-ag~e~l~fl-aF~ss~np~~~~LaG~~svf~~---lP~eVLa~aF~v~~e~v~k 510 (531)
T 3fz3_A 436 DAILDQEVQQGQLFIVPQNHGVIQQ-AGNQGFEYF-AFKTEENAFINTLAGRTSFLRA---LPDEVLANAYQISREQARQ 510 (531)
T ss_dssp CEEEEEEEETTCEEEECTTCEEEEE-EEEEEEEEE-EEESSTTCCEEESSSTTCHHHH---SCHHHHHHHHTCCHHHHHH
T ss_pred cEEEEEEecCCeEEEECCCCeEEEe-cCCCCEEEE-EEecCCCCcceeccchhHHHHh---CCHHHHHHHhCcCHHHHHH
Confidence 6888999999999999999999875 565556665 66 45899999898 678885 9999999999999999999
Q ss_pred hhhh
Q 048097 216 LQDK 219 (224)
Q Consensus 216 l~~~ 219 (224)
|+++
T Consensus 511 Lk~~ 514 (531)
T 3fz3_A 511 LKYN 514 (531)
T ss_dssp HHHS
T ss_pred HHhc
Confidence 9986
No 7
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=99.97 E-value=2.3e-30 Score=240.39 Aligned_cols=161 Identities=18% Similarity=0.081 Sum_probs=136.2
Q ss_pred CCCCCCeeeecCCCCCCccCCCCeeEEEccccccCcccccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEe
Q 048097 54 LAKAEDFFLSGLDKPGNTENRLGFNVTNANVEQIPGLNTLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVT 133 (224)
Q Consensus 54 ~~~~~df~f~~~~~~~~~~~~~g~~v~~~~~~~~p~L~~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~ 133 (224)
......+.|+++.+++.++ ..|++++.+++.+||+|+++|++++++++.|||+++|||||+|+|++||++|+++++|++
T Consensus 241 g~~~~~~~~~l~~~~p~~~-~~~G~v~~~~~~~fP~L~~l~is~~~v~l~pg~m~~PH~hp~A~ei~~V~~G~~~v~vv~ 319 (445)
T 2cav_A 241 TLSSQDKPFNLRSRDPIYS-NNYGKLYEITPEKNSQLRDLDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVG 319 (445)
T ss_dssp -----CCCEETTSSCCSEE-SSSEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEE
T ss_pred CCCCcccceeccccCCCcc-CCCceEEEeChHHCcccccCCCceEEEEeeCCceeeeEECCCCcEEEEEEeeEEEEEEEe
Confidence 3445678999998888774 456689999999999999999999999999999999999999999999999999999998
Q ss_pred CCCC------CCe--eEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEEEEE-eCCCCceeech---hhhhcCCCCCCHHH
Q 048097 134 SNQL------NNT--LIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAFAGF-SSQFPGVITIA---DTVFGANPPINPDF 201 (224)
Q Consensus 134 ~~~~------~~k--~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l~~~-~s~~pg~~~~~---~~lf~~~p~~p~~v 201 (224)
+++. +++ +++.+|++||+++||+|++|++.|. +++.+++.. ++++|+.+.++ .++|++ +|++|
T Consensus 320 ~~~~~~~~~~g~~~~~~~~~l~~GdV~vvP~g~~h~~~n~--~~~~~v~f~~~~~~~~~~~laG~~~sv~~~---~p~~v 394 (445)
T 2cav_A 320 LEQQQQQGLESMQLRRYAATLSEGDIIVIPSSFPVALKAA--SDLNMVGIGVNAENNERNFLAGHKENVIRQ---IPRQV 394 (445)
T ss_dssp C-----------CCEEEEEEECTTCEEEECTTCCEEEEES--SSEEEEEEEESCTTCCEEESSSSTTBSGGG---SCHHH
T ss_pred CCCcccccccCcceEEEEeEecCCcEEEEcCCcEEEEEcC--CCeEEEEEEccCCCCCcEEcccchhhhhhh---CCHHH
Confidence 7621 124 7899999999999999999999998 456666543 56689999998 688985 99999
Q ss_pred HHhhcCCCHHHHHHhhhhh
Q 048097 202 LGKAFQLDPKIVKDLQDKF 220 (224)
Q Consensus 202 La~af~~~~~~v~~l~~~~ 220 (224)
|+++|++|.+++++|++..
T Consensus 395 la~af~v~~~~v~~l~~~~ 413 (445)
T 2cav_A 395 SDLTFPGSGEEVEELLENQ 413 (445)
T ss_dssp HHHHSSSCHHHHHHHHHHC
T ss_pred HHHHHCcCHHHHHHHHhcC
Confidence 9999999999999999853
No 8
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.97 E-value=3.3e-30 Score=237.70 Aligned_cols=161 Identities=21% Similarity=0.148 Sum_probs=140.9
Q ss_pred CCCCCCeeeecCCCCCCccCCCCeeEEEccccccCcccccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEe
Q 048097 54 LAKAEDFFLSGLDKPGNTENRLGFNVTNANVEQIPGLNTLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVT 133 (224)
Q Consensus 54 ~~~~~df~f~~~~~~~~~~~~~g~~v~~~~~~~~p~L~~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~ 133 (224)
......+.|+++.+++.+++..| +++.+++.+||+|+++|+++++++|.||++++|||||+|+|++||++|++++++++
T Consensus 209 g~~~~~~~~~l~~~~p~~~~~~G-~~~~~~~~~~P~L~~l~is~a~~~l~~g~~~~pH~h~~A~Ei~~V~~G~~~v~~v~ 287 (416)
T 1uij_A 209 TISSEDEPFNLRSRNPIYSNNFG-KFFEITPEKNPQLRDLDIFLSSVDINEGALLLPHFNSKAIVILVINEGDANIELVG 287 (416)
T ss_dssp GGGCSSSCEETTSSCCSEECSSE-EEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEE
T ss_pred CCCCcccceeccccCCCccCCCc-eEEEEChHHCccchhcCcceEEEEEcCCcEecceEcCCCcEEEEEEeeEEEEEEEc
Confidence 34456789999988887766655 79999999999999999999999999999999999999999999999999999998
Q ss_pred CCCC---------CC--eeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEEEEEe-CCCCceeech---hhhhcCCCCCC
Q 048097 134 SNQL---------NN--TLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAFAGFS-SQFPGVITIA---DTVFGANPPIN 198 (224)
Q Consensus 134 ~~~~---------~~--k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l~~~~-s~~pg~~~~~---~~lf~~~p~~p 198 (224)
+++. ++ +++..+|++||+++||+|++|++.|. +++.+++.++ +++|+.+.++ .++|+. +|
T Consensus 288 ~~g~~~~~~~~~~~~~~~~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~l~f~~~~~~~~~~~laG~~~sv~~~---~p 362 (416)
T 1uij_A 288 IKEQQQKQKQEEEPLEVQRYRAELSEDDVFVIPAAYPFVVNAT--SNLNFLAFGINAENNQRNFLAGEKDNVVRQ---IE 362 (416)
T ss_dssp EC------------CCEEEEEEEEETTCEEEECTTCCEEEEES--SSEEEEEEEETCTTCCEEESSSSTTBSGGG---SC
T ss_pred CCCccccccccccccceEEEEEEecCCcEEEECCCCeEEEEcC--CCeEEEEEEcCCCCCcceecccchhhHHHh---CC
Confidence 7620 01 47778999999999999999999998 5788887775 4599999997 678884 99
Q ss_pred HHHHHhhcCCCHHHHHHhhhhh
Q 048097 199 PDFLGKAFQLDPKIVKDLQDKF 220 (224)
Q Consensus 199 ~~vLa~af~~~~~~v~~l~~~~ 220 (224)
++||+++|+++++++++|++..
T Consensus 363 ~~vla~af~~~~~~v~~l~~~~ 384 (416)
T 1uij_A 363 RQVQELAFPGSAQDVERLLKKQ 384 (416)
T ss_dssp HHHHHHHSSSCHHHHHHHTTSC
T ss_pred HHHHHHHHCcCHHHHHHHHhcC
Confidence 9999999999999999999853
No 9
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=99.96 E-value=2.4e-29 Score=236.38 Aligned_cols=148 Identities=20% Similarity=0.220 Sum_probs=135.6
Q ss_pred CCCCccCCCCeeEEEccccccCcccccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEe
Q 048097 67 KPGNTENRLGFNVTNANVEQIPGLNTLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVL 146 (224)
Q Consensus 67 ~~~~~~~~~g~~v~~~~~~~~p~L~~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l 146 (224)
..+++.+..|++++.+++.+||+|+++++++++++++||++++|||||+++|++||++|+++++++++++ ++++..+|
T Consensus 344 ~~~~~~~~~gG~v~~~~~~~fP~L~~l~is~a~v~L~PG~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G--~~~~~~~l 421 (510)
T 3c3v_A 344 RSPDIYNPQAGSLKTANELNLLILRWLGLSAEYGNLYRNALFVPHYNTNAHSIIYALRGRAHVQVVDSNG--NRVYDEEL 421 (510)
T ss_dssp SCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTS--CEEEEEEE
T ss_pred ccCCcccCCCeEEEEeccccCcccccceEEEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEeCCC--CEEEeEEE
Confidence 3445557889999999999999999999999999999999999999999999999999999999998763 68888899
Q ss_pred cCCCEEEEcCCCeeEEEeCCCCcEEEEEEEeCCCCceeech--hhhhcCCCCCCHHHHHhhcCCCHHHHHHhhhhh
Q 048097 147 NKGDVFVFPIGLIHFQVNIGKTSAVAFAGFSSQFPGVITIA--DTVFGANPPINPDFLGKAFQLDPKIVKDLQDKF 220 (224)
Q Consensus 147 ~~GDv~v~P~G~~H~~~N~G~~~a~~l~~~~s~~pg~~~~~--~~lf~~~p~~p~~vLa~af~~~~~~v~~l~~~~ 220 (224)
++||+++||+|.+|++.| |++++.+++++.+++|+...++ .++|++ +|++||+++|+++++++++|++.+
T Consensus 422 ~~GDv~viP~G~~H~~~N-g~e~l~~l~f~~s~~p~~~~LaG~~svf~~---lp~eVla~aF~v~~e~v~~L~~~~ 493 (510)
T 3c3v_A 422 QEGHVLVVPQNFAVAGKS-QSDNFEYVAFKTDSRPSIANLAGENSVIDN---LPEEVVANSYGLPREQARQLKNNN 493 (510)
T ss_dssp ETTCEEEECTTCEEEEEE-CSSEEEEEEEESSSSCCEEESSSTTSTTTT---SCHHHHHHHHTCCHHHHHHHHHSC
T ss_pred cCCcEEEECCCCeEEEEe-CCCCEEEEEEECCCCcceeecccHhHHHHh---CCHHHHHHHHCcCHHHHHHHHhhC
Confidence 999999999999999999 8888888877778899999998 788985 999999999999999999999865
No 10
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=99.96 E-value=1.5e-29 Score=234.32 Aligned_cols=161 Identities=20% Similarity=0.128 Sum_probs=140.2
Q ss_pred CCCCCCCeeeecCCCCCCccCCCCeeEEEccccccCcccccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEE
Q 048097 53 KLAKAEDFFLSGLDKPGNTENRLGFNVTNANVEQIPGLNTLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFV 132 (224)
Q Consensus 53 ~~~~~~df~f~~~~~~~~~~~~~g~~v~~~~~~~~p~L~~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v 132 (224)
.......+.|+++.+++.++ ..|++++.+++.+||+|+++|+++++++|.||++++|||||+|+|++||++|+++++++
T Consensus 225 ~g~~~~~~~~~l~~~~p~~~-~~gG~v~~~~~~~~P~L~~l~is~a~v~l~pG~m~~pH~hp~A~Ei~~V~~G~~~v~vv 303 (434)
T 2ea7_A 225 KELSSQDEPFNLRNSKPIYS-NKFGRWYEMTPEKNPQLKDLDVFISSVDMKEGALLLPHYSSKAIVIMVINEGEAKIELV 303 (434)
T ss_dssp SCTTCSSSCEETTSSCCSEE-ETTEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEE
T ss_pred CCCCCcccceeeccCCCcee-CCCcEEEEEChhhCccccccCcceEEEEEcCCeeeccEEcCCCCEEEEEEeeEEEEEEE
Confidence 44556788999998888775 45668999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCC--------CC--eeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEEEEE-eCCCCceeech---hhhhcCCCCCC
Q 048097 133 TSNQL--------NN--TLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAFAGF-SSQFPGVITIA---DTVFGANPPIN 198 (224)
Q Consensus 133 ~~~~~--------~~--k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l~~~-~s~~pg~~~~~---~~lf~~~p~~p 198 (224)
++++. ++ +++..+|++||+++||+|++|++.|. +++.+++.+ ++++|+.+.++ .++|+. +|
T Consensus 304 ~~~g~~~~~~~~~~~~~r~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~v~f~~~~~~~~~~~laG~~~sv~~~---~p 378 (434)
T 2ea7_A 304 GLSDQQQQKQQEESLEVQRYRAELSEDDVFVIPAAYPVAINAT--SNLNFFAFGINAENNRRNFLAGGKDNVMSE---IP 378 (434)
T ss_dssp EEEECCCCTTSCCCEEEEEEEEEECTTCEEEECTTCCEEEEES--SSEEEEEEEETCTTCCEEESSSSTTBGGGG---SC
T ss_pred ecCccccccccccCcceEEEEEEecCCcEEEECCCCeEEEEcC--CCeEEEEEECCCCCCCceecccchhhhhhh---CC
Confidence 87520 12 36778999999999999999999998 467777655 45689999998 678885 99
Q ss_pred HHHHHhhcCCCHHHHHHhhhh
Q 048097 199 PDFLGKAFQLDPKIVKDLQDK 219 (224)
Q Consensus 199 ~~vLa~af~~~~~~v~~l~~~ 219 (224)
++||+++|+++.+++++|++.
T Consensus 379 ~~vla~af~v~~~~v~~l~~~ 399 (434)
T 2ea7_A 379 TEVLEVSFPASGKKVEKLIKK 399 (434)
T ss_dssp HHHHHHHSSSCHHHHHHHHTT
T ss_pred HHHHHHHHCcCHHHHHHHHhc
Confidence 999999999999999999985
No 11
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.96 E-value=3.7e-29 Score=233.96 Aligned_cols=147 Identities=18% Similarity=0.233 Sum_probs=135.0
Q ss_pred CCCccCCCCeeEEEccccccCcccccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEec
Q 048097 68 PGNTENRLGFNVTNANVEQIPGLNTLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLN 147 (224)
Q Consensus 68 ~~~~~~~~g~~v~~~~~~~~p~L~~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~ 147 (224)
.+++.+..|++++.+++.+||+|+++++++++++++||++++|||||+++|++||++|+++++++++++ ++++..+|+
T Consensus 311 ~~~~~~~~gG~v~~~~~~~~P~L~~l~is~~~v~l~pGa~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~G--~~~~~~~l~ 388 (476)
T 1fxz_A 311 SPDIYNPQAGSVTTATSLDFPALSWLRLSAEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCNG--ERVFDGELQ 388 (476)
T ss_dssp CCSEEETTTEEEEEECTTTSGGGTTTTCCEEEEEECTTCEEEEEEETTCCEEEEEEESEEEEEEECTTS--CEEEEEEEE
T ss_pred cCCcccCCCeEEEEeccccCcccccCcceEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEecCC--CEEeeeEEc
Confidence 344557889999999999999999999999999999999999999999999999999999999998763 677788899
Q ss_pred CCCEEEEcCCCeeEEEeCCCCcEEEEEEEeCCCCceeech--hhhhcCCCCCCHHHHHhhcCCCHHHHHHhhhhh
Q 048097 148 KGDVFVFPIGLIHFQVNIGKTSAVAFAGFSSQFPGVITIA--DTVFGANPPINPDFLGKAFQLDPKIVKDLQDKF 220 (224)
Q Consensus 148 ~GDv~v~P~G~~H~~~N~G~~~a~~l~~~~s~~pg~~~~~--~~lf~~~p~~p~~vLa~af~~~~~~v~~l~~~~ 220 (224)
+||+++||+|.+|++.| |++.+.+++.+.+++|+...++ .++|++ +|++||+++|+++++++++|++.+
T Consensus 389 ~GDv~viP~G~~H~~~n-g~~~l~~l~f~~s~~p~~~~laG~~s~~~~---~p~~Vla~af~~~~~~v~~l~~~~ 459 (476)
T 1fxz_A 389 EGRVLIVPQNFVVAARS-QSDNFEYVSFKTNDTPMIGTLAGANSLLNA---LPEEVIQHTFNLKSQQARQIKNNN 459 (476)
T ss_dssp TTCEEEECTTCEEEEEE-CSTTEEEEEEESSSSCCEEESSSTTCTGGG---SCHHHHHHHHTCCHHHHHHHHHSC
T ss_pred CCCEEEECCCCeEEEEe-CCCCEEEEEEECCCCCceeEccchhHHHHh---CCHHHHHHHhCcCHHHHHHHHhhC
Confidence 99999999999999999 8888888887778899999997 788985 999999999999999999999865
No 12
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.96 E-value=2.3e-29 Score=236.09 Aligned_cols=154 Identities=19% Similarity=0.227 Sum_probs=138.5
Q ss_pred eeeecCC-CCCCccCCCCeeEEEccccccCcccccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCC
Q 048097 60 FFLSGLD-KPGNTENRLGFNVTNANVEQIPGLNTLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLN 138 (224)
Q Consensus 60 f~f~~~~-~~~~~~~~~g~~v~~~~~~~~p~L~~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~ 138 (224)
+.++... .++++.+..|++++.+++.+||+|+++|+++++++++||++++|||||+++|++||++|+++++++++++
T Consensus 331 l~~ni~~~~~~~~~~~~gG~v~~~~~~~~P~L~~lgls~a~v~l~pG~~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~g-- 408 (493)
T 2d5f_A 331 LHENIARPSRADFYNPKAGRISTLNSLTLPALRQFGLSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNAQG-- 408 (493)
T ss_dssp CEEECCCGGGCSEEETTTEEEEEESTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTS--
T ss_pred eeecccccCCCCcccCCCeEEEEeccccCccccccceEEEEEEccCCceeeeeECCCCCEEEEEEeceEEEEEEcCCC--
Confidence 3444432 4566667889999999999999999999999999999999999999999999999999999999998763
Q ss_pred CeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEEEEEeCCCCceeechhhhhcCCCCCCHHHHHhhcCCCHHHHHHhhh
Q 048097 139 NTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAFAGFSSQFPGVITIADTVFGANPPINPDFLGKAFQLDPKIVKDLQD 218 (224)
Q Consensus 139 ~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l~~~~s~~pg~~~~~~~lf~~~p~~p~~vLa~af~~~~~~v~~l~~ 218 (224)
++++..+|++||+++||+|.+|++.| +++++.+++++++++|+.+.+ .++|++ +|++||+++|+++++++++|++
T Consensus 409 ~~~~~~~l~~GDv~vvP~G~~H~~~n-~~e~~~~l~~~ts~~p~~~~l-~s~~~~---~p~eVla~aF~v~~~~v~~l~~ 483 (493)
T 2d5f_A 409 NAVFDGELRRGQLLVVPQNFVVAEQG-GEQGLEYVVFKTHHNAVSSYI-KDVFRA---IPSEVLSNSYNLGQSQVRQLKY 483 (493)
T ss_dssp CEEEEEEEETTCEEEECTTCEEEEEE-EEEEEEEEEEESSTTCCEEEH-HHHHHH---SCHHHHHHHHTCCHHHHHHHHH
T ss_pred CEEEeEEEcCCCEEEECCCCeEeeee-CCCCEEEEEEECCCCCcceeH-HHHHHh---CCHHHHHHHHCcCHHHHHHHHh
Confidence 67777889999999999999999998 558899999999999999999 778885 9999999999999999999998
Q ss_pred hh
Q 048097 219 KF 220 (224)
Q Consensus 219 ~~ 220 (224)
..
T Consensus 484 ~~ 485 (493)
T 2d5f_A 484 QG 485 (493)
T ss_dssp SS
T ss_pred cC
Confidence 64
No 13
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=99.96 E-value=5.8e-29 Score=229.29 Aligned_cols=156 Identities=18% Similarity=0.147 Sum_probs=135.5
Q ss_pred CCeeeecCCCCCCccCCCCeeEEEcccccc-CcccccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCC
Q 048097 58 EDFFLSGLDKPGNTENRLGFNVTNANVEQI-PGLNTLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQ 136 (224)
Q Consensus 58 ~df~f~~~~~~~~~~~~~g~~v~~~~~~~~-p~L~~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~ 136 (224)
..+.|+++.+++.++|..| +++.+++.+| |+|+++|++++|++|.|||+++|||||+|+|++||++|++++++++++.
T Consensus 226 ~~~~~nl~~~~p~~~n~~G-~~~~~~~~~~~p~L~~~gis~~r~~l~pgg~~~PH~~p~A~ei~yV~~G~g~v~vv~~~~ 304 (418)
T 3s7i_A 226 ITNPINLREGEPDLSNNFG-KLFEVKPDKKNPQLQDLDMMLTCVEIKEGALMLPHFNSKAMVIVVVNKGTGNLELVAVRK 304 (418)
T ss_dssp CCCCEETTCSCCSEEETTE-EEEEECSBTTBHHHHHHTCEEEEEEECTTEEEEEEEESSCEEEEEEEECCEEEEEEEEEE
T ss_pred CCcccccccCCCceeCCCC-eEEEechHHcchhhccCCeeEEEEEecCCceeCceecCCCCEEEEEEeCeEEEEEEeCCC
Confidence 4789999988888766655 6899999999 9999999999999999999999999999999999999999999997651
Q ss_pred C----------------------CCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEEEEE-eCCCCceeechh---hh
Q 048097 137 L----------------------NNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAFAGF-SSQFPGVITIAD---TV 190 (224)
Q Consensus 137 ~----------------------~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l~~~-~s~~pg~~~~~~---~l 190 (224)
. ..+++...|++||+++||+|++||+.|.+ ++.+++.. ++++|+.+.++. ++
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GDV~vvP~G~~~~~~~~~--~l~~v~f~~~~~~~~~~~LAG~~~sv 382 (418)
T 3s7i_A 305 EQQQRGRREEEEDEDEEEEGSNREVRRYTARLKEGDVFIMPAAHPVAINASS--ELHLLGFGINAENNHRIFLAGDKDNV 382 (418)
T ss_dssp C-------------------CCEEEEEEEEEECTTCEEEECTTCCEEEEESS--CEEEEEEEESCTTCCEEESSSSTTBH
T ss_pred ccccccccccccccccccccccccceEEEeeeCCCCEEEECCCCEEEEECCC--CEEEEEEEcCCCCCcceEccCchhhh
Confidence 0 01577899999999999999999999864 46655432 567999999985 68
Q ss_pred hcCCCCCCHHHHHhhcCCCHHHHHHhhhh
Q 048097 191 FGANPPINPDFLGKAFQLDPKIVKDLQDK 219 (224)
Q Consensus 191 f~~~p~~p~~vLa~af~~~~~~v~~l~~~ 219 (224)
|+ ++|++||+++|++|.+++++|++.
T Consensus 383 ~~---~~~~evla~af~v~~~~v~~L~~~ 408 (418)
T 3s7i_A 383 ID---QIEKQAKDLAFPGSGEQVEKLIKN 408 (418)
T ss_dssp HH---HSCHHHHHHHSSSCHHHHHHHHHT
T ss_pred hh---cCCHHHHHHHhCCCHHHHHHHHhc
Confidence 88 499999999999999999999985
No 14
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=99.94 E-value=8.7e-27 Score=191.72 Aligned_cols=151 Identities=13% Similarity=0.182 Sum_probs=125.3
Q ss_pred CCeeeecCCCCCCccCCCCeeEEEccc-----cccCcccccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEE
Q 048097 58 EDFFLSGLDKPGNTENRLGFNVTNANV-----EQIPGLNTLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFV 132 (224)
Q Consensus 58 ~df~f~~~~~~~~~~~~~g~~v~~~~~-----~~~p~L~~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v 132 (224)
+.|+|+........ ...|++++.++. ..+|+++ ++++++++++||++.+|| |++++|++||++|+++++++
T Consensus 2 ~p~~f~~~~~~~~~-~~~~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~pg~~~~pH-h~~a~E~~yVl~G~~~v~v~ 77 (178)
T 1dgw_A 2 NPYLFRSNKFLTLF-KNQHGSLRLLQRFNEDTEKLENLR--DYRVLEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLV 77 (178)
T ss_dssp CTTEECGGGEEEEE-EETTEEEEEECCTTSSCGGGGGGT--TEEEEEEEECTTEEEEEE-EESSEEEEEEEESEEEEEEE
T ss_pred CCceechhhcccce-EcCCCEEEEEcccCCcchhcCCcC--cEEEEEEEecCCcEecCc-CCCCCEEEEEEeEEEEEEEE
Confidence 45788876655544 456778999877 6788887 589999999999999999 99999999999999999998
Q ss_pred eCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCC-cEEEEEEE-eCCCCceee---ch-----hhhhcCCCCCCHHHH
Q 048097 133 TSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKT-SAVAFAGF-SSQFPGVIT---IA-----DTVFGANPPINPDFL 202 (224)
Q Consensus 133 ~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~-~a~~l~~~-~s~~pg~~~---~~-----~~lf~~~p~~p~~vL 202 (224)
+++ + ...+.|++||+++||+|.+|+++|.|++ ++++++++ ++++||.+. ++ .++|+ ++|++||
T Consensus 78 ~~~---~-~~~~~l~~GDv~~~P~g~~H~~~N~g~~~~l~~l~v~~~~~~~g~~~~~~l~g~~~~~~~~~---~~p~~vl 150 (178)
T 1dgw_A 78 NPD---G-RDTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAITFRRPGTVEDFFLSSTKRLPSYLS---AFSKNFL 150 (178)
T ss_dssp ETT---E-EEEEEEETTEEEEECTTCCEEEEECCSSSCEEEEEEEECCSSTTCCCEEESSCCSSCCCGGG---GSCHHHH
T ss_pred eCC---C-cEEEEECCCCEEEECCCCeEEEEeCCCCCCEEEEEEECCCCCCCceEEeeccCCcCcchhhh---hCCHHHH
Confidence 765 2 2368999999999999999999999986 77777664 567888433 32 46787 4999999
Q ss_pred HhhcCCCHHHHHHhhhh
Q 048097 203 GKAFQLDPKIVKDLQDK 219 (224)
Q Consensus 203 a~af~~~~~~v~~l~~~ 219 (224)
+++|+++++++++|+..
T Consensus 151 a~af~v~~~~~~~l~~~ 167 (178)
T 1dgw_A 151 EASYDSPYDEIEQTLLQ 167 (178)
T ss_dssp HHHHTSCHHHHHHHTTS
T ss_pred HHHHCcCHHHHHHHhcC
Confidence 99999999999999943
No 15
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=99.94 E-value=2e-26 Score=211.07 Aligned_cols=148 Identities=23% Similarity=0.138 Sum_probs=121.6
Q ss_pred eecCCCCCCccCCCCeeEEEccccccCcccccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeC------C
Q 048097 62 LSGLDKPGNTENRLGFNVTNANVEQIPGLNTLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTS------N 135 (224)
Q Consensus 62 f~~~~~~~~~~~~~g~~v~~~~~~~~p~L~~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~------~ 135 (224)
+.+..+.+.++|. +++++.+++.+ +|++++++++.||++.+|||||+|+|+.||++|+++++++++ +
T Consensus 213 ~~l~~~~p~~~n~-~G~~~~v~~~~------l~is~a~v~l~pG~~~~PH~h~~A~Ei~yVl~G~g~v~vv~~~~~~~~~ 285 (397)
T 2phl_A 213 KSLSKQDNTIGNE-FGNLTERTDNS------LNVLISSIEMEEGALFVPHYYSKAIVILVVNEGEAHVELVGPKGNKETL 285 (397)
T ss_dssp -------CEEEET-TEEEEEEEETT------TTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEECC--CCS
T ss_pred ccccccCCcccCC-CCeEEEEeecc------CCeeEEEEEEcCCcEeeeeEcCCCCEEEEEEeeeEEEEEEeccccccCC
Confidence 3444444545455 44589999988 799999999999999999999999999999999999999987 4
Q ss_pred CCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEEEEE-eCCCCceeech---hhhhcCCC-CCC-HHHHHhhcCCC
Q 048097 136 QLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAFAGF-SSQFPGVITIA---DTVFGANP-PIN-PDFLGKAFQLD 209 (224)
Q Consensus 136 ~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l~~~-~s~~pg~~~~~---~~lf~~~p-~~p-~~vLa~af~~~ 209 (224)
+ +++++.+|++||+++||+|++|+++|.+ ++.+++.. ++++|+.+.++ .++|+..| +|+ ++||+++|+++
T Consensus 286 g--~~~~~~~l~~GDV~vvP~G~~h~~~n~~--~l~~l~f~~~s~~~~~~~laG~~~sv~~~~p~~~~~~eVla~af~v~ 361 (397)
T 2phl_A 286 E--YESYRAELSKDDVFVIPAAYPVAIKATS--NVNFTGFGINANNNNRNLLAGKTDNVISSIGRALDGKDVLGLTFSGS 361 (397)
T ss_dssp C--EEEEEEEEETTCEEEECTTCCEEEEESS--SEEEEEEEESCTTCCEEESSSSSSBHHHHHHTSTTHHHHHHHHSSSC
T ss_pred C--ceEEEEEecCCCEEEECCCCeEEEEeCC--CeEEEEEECCCCCCcceecccchhhHHhhCCCccchHHHHHHHhCcC
Confidence 2 6899999999999999999999999986 67776644 56699999888 78898622 233 99999999999
Q ss_pred HHHHHHhhhhh
Q 048097 210 PKIVKDLQDKF 220 (224)
Q Consensus 210 ~~~v~~l~~~~ 220 (224)
++++++|++..
T Consensus 362 ~~~v~~l~~~~ 372 (397)
T 2phl_A 362 GDEVMKLINKQ 372 (397)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHhcC
Confidence 99999999864
No 16
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.92 E-value=5.8e-25 Score=204.72 Aligned_cols=140 Identities=21% Similarity=0.285 Sum_probs=118.6
Q ss_pred CCeeEEEccccccCcccccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeE------------
Q 048097 75 LGFNVTNANVEQIPGLNTLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLI------------ 142 (224)
Q Consensus 75 ~g~~v~~~~~~~~p~L~~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~------------ 142 (224)
-++ ++.+...+.|+|+++|++++|++++|||+++||||+ ++|++||++|+++++++.++. .+.|
T Consensus 44 e~G-~~~~~~~~~~~l~~~gvs~~r~~i~pggl~~Ph~h~-a~ei~yVl~G~g~vg~v~p~~--~~tf~~~~~~~~~~~~ 119 (459)
T 2e9q_A 44 EAG-FTEVWDQDNDEFQCAGVNMIRHTIRPKGLLLPGFSN-APKLIFVAQGFGIRGIAIPGC--AETYQTDLRRSQSAGS 119 (459)
T ss_dssp TTE-EEEECCTTSHHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEECCTTC--CCCEEECCC-------
T ss_pred CCc-EEEecCCCChhhccCceEEEEEEEcCCCEecceecC-CceEEEEEeeEEEEEEEeCCC--cchhccchhhcccccc
Confidence 344 455566777999999999999999999999999996 899999999999999997641 1112
Q ss_pred --------EEEecCCCEEEEcCCCeeEEEeCCCCcEEEEEEEeCCC--------Cceeech-------------------
Q 048097 143 --------AKVLNKGDVFVFPIGLIHFQVNIGKTSAVAFAGFSSQF--------PGVITIA------------------- 187 (224)
Q Consensus 143 --------~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l~~~~s~~--------pg~~~~~------------------- 187 (224)
.+.|++||+++||+|++||++|.|++++++++++++.| +..+.++
T Consensus 120 ~~~d~~q~~~~l~~GDv~~iPaG~~H~~~N~g~~~l~~l~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~~ 199 (459)
T 2e9q_A 120 AFKDQHQKIRPFREGDLLVVPAGVSHWMYNRGQSDLVLIVFADTRNVANQIDPYLRKFYLAGRPEQVERGVEEWERSSRK 199 (459)
T ss_dssp CCCEEECCCEEEETTEEEEECTTCCEEEEECSSSCEEEEEEEESSSTTCCSCSSCCEEESSSCCCCCSSTTCC-------
T ss_pred ccccccceeEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEecCCCcccccCcccceeeccCCccccchhhhcccccccc
Confidence 46899999999999999999999999999999998654 3344444
Q ss_pred -------hhhhcCCCCCCHHHHHhhcCCCHHHHHHhhhhhc
Q 048097 188 -------DTVFGANPPINPDFLGKAFQLDPKIVKDLQDKFI 221 (224)
Q Consensus 188 -------~~lf~~~p~~p~~vLa~af~~~~~~v~~l~~~~~ 221 (224)
.++|+ ++++++|+++|++|.++++||+++..
T Consensus 200 ~~~~~~~~nif~---gf~~evLa~aF~v~~~~v~kL~~~~~ 237 (459)
T 2e9q_A 200 GSSGEKSGNIFS---GFADEFLEEAFQIDGGLVRKLKGEDD 237 (459)
T ss_dssp -----CCCCTTT---TSCHHHHHHHHTCCHHHHHHHHTTTC
T ss_pred ccccccccchhh---cCCHHHHHhhcCCCHHHHHhhhhccc
Confidence 37888 59999999999999999999997654
No 17
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.92 E-value=3.4e-24 Score=192.25 Aligned_cols=160 Identities=21% Similarity=0.207 Sum_probs=141.6
Q ss_pred CCCCCCCCeeeecCCCCCCccCCCCeeEEEccccccCcccccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEE
Q 048097 52 PKLAKAEDFFLSGLDKPGNTENRLGFNVTNANVEQIPGLNTLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGF 131 (224)
Q Consensus 52 p~~~~~~df~f~~~~~~~~~~~~~g~~v~~~~~~~~p~L~~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~ 131 (224)
+...+.++|+|+.+.+++.. +..|+.++.+...++|+++ ++++.+++++||+..++|||+++.|++||++|++++.+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~-~~~gg~~~~~~~~~~~~~~--~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~v 270 (361)
T 2vqa_A 194 QTAKIEVPHTHNLLGQQPLV-SLGGNELRLASAKEFPGSF--NMTGALIHLEPGAMRQLHWHPNADEWQYVLDGEMDLTV 270 (361)
T ss_dssp CCCBCCSCCEEECTTSCCSE-EETTEEEEEECTTTCTTST--TCEEEEEEECTTCEEEEEECSSCCEEEEEEESCEEEEE
T ss_pred cCCCCCcceEeccccCCCcc-cCCCceEEEEehhhCcCcc--cceEEEEEECCCcccccccCCCCCEEEEEEeCEEEEEE
Confidence 45667889999988777643 5678889999999999987 47889999999999999999988999999999999999
Q ss_pred EeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEEEEEeCCCCceeechhhhhcCCCCCCHHHHHhhcCCCHH
Q 048097 132 VTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAFAGFSSQFPGVITIADTVFGANPPINPDFLGKAFQLDPK 211 (224)
Q Consensus 132 v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l~~~~s~~pg~~~~~~~lf~~~p~~p~~vLa~af~~~~~ 211 (224)
++++ ++...+.|++||++++|+|..|++.|.|++++++++++.+++++...++.+ ++ .+|++||+++|+++++
T Consensus 271 ~~~~---g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~~~~~~~~~~~~~~~~-~~---~~~~~vl~~~f~~~~~ 343 (361)
T 2vqa_A 271 FASE---GKASVSRLQQGDVGYVPKGYGHAIRNSSQKPLDIVVVFNDGDYQSIDLSTW-LA---SNPSSVLGNTFQISPE 343 (361)
T ss_dssp ECST---TCEEEEEECTTCEEEECTTCEEEEECCSSSCEEEEEEESSSSCCCEEHHHH-HH---TSCHHHHHHHHTCCHH
T ss_pred EcCC---CcEEEEEECCCCEEEECCCCeEEeEECCCCCEEEEEEECCCCcceeeHHHH-hh---hCCHHHHHHHHCcCHH
Confidence 8765 555578999999999999999999999999999999999999999999886 45 3999999999999999
Q ss_pred HHHHhhhhhc
Q 048097 212 IVKDLQDKFI 221 (224)
Q Consensus 212 ~v~~l~~~~~ 221 (224)
++++|++...
T Consensus 344 ~~~~l~~~~~ 353 (361)
T 2vqa_A 344 LTKKLPVQDT 353 (361)
T ss_dssp HHTTSCCSCC
T ss_pred HHHhhhccCC
Confidence 9999987653
No 18
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=99.91 E-value=2.5e-24 Score=199.34 Aligned_cols=152 Identities=18% Similarity=0.197 Sum_probs=125.4
Q ss_pred CCCeeeecCC-CCCCccCCCCeeEEEcc--ccccCcccccc-eEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEE
Q 048097 57 AEDFFLSGLD-KPGNTENRLGFNVTNAN--VEQIPGLNTLG-TSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFV 132 (224)
Q Consensus 57 ~~df~f~~~~-~~~~~~~~~g~~v~~~~--~~~~p~L~~lg-is~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v 132 (224)
.+.|.|+... ..... ...|+++..++ ..+.|.|++++ +++++++++|||+++|| |++++|++||++|+++++++
T Consensus 20 ~~p~~f~~~~~~~~~~-~se~G~ir~l~~~~~~~~~l~~~~~~s~~~~~l~PGg~~~pH-h~~a~Ei~yVl~G~g~v~~v 97 (434)
T 2ea7_A 20 NNPFYFNSDRWFRTLY-RNEWGHIRVLQRFDQRSKQMQNLENYRVVEFKSKPNTLLLPH-HADADFLLVVLNGTAVLTLV 97 (434)
T ss_dssp GCTTEECTTTSEEEEE-EETTEEEEEECCSTTTCGGGGGGTTCEEEEEEECTTEEEEEE-EESEEEEEEEEESEEEEEEE
T ss_pred CCCeEEeccccccceE-EcCCEEEEEEeccCCcccccCccccEEEEEEEecCCcCccCc-cCCCceEEEEEecEEEEEEE
Confidence 3567777543 22223 34566788763 46778999998 99999999999999999 88899999999999999999
Q ss_pred eCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCC-CCcEEEEEEEe-CCCCce---eechh-----hhhcCCCCCCHHHH
Q 048097 133 TSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIG-KTSAVAFAGFS-SQFPGV---ITIAD-----TVFGANPPINPDFL 202 (224)
Q Consensus 133 ~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G-~~~a~~l~~~~-s~~pg~---~~~~~-----~lf~~~p~~p~~vL 202 (224)
++ ++.+.+.|++||+++||+|.+||++|.| ++++++++++. +++|+. +.++. ++|+ ++|++||
T Consensus 98 ~~----~~~~~~~l~~GDv~~iP~G~~H~~~N~g~~e~l~~l~~~~~s~~pg~~~~f~l~g~~~~~~~~~---~~~~~vL 170 (434)
T 2ea7_A 98 NP----DSRDSYILEQGHAQKIPAGTTFFLVNPDDNENLRIIKLAIPVNNPHRFQDFFLSSTEAQQSYLR---GFSKNIL 170 (434)
T ss_dssp CS----SCEEEEEEETTEEEEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEEECSCCSSCCCGGG---GSCHHHH
T ss_pred eC----CCCEEEEeCCCCEEEECCCccEEEEeCCCCCCeEEEEEecCCCCCCceeeeeecCCcchhhhhh---cCCHHHH
Confidence 75 3456799999999999999999999998 88999998874 667763 34554 3677 4999999
Q ss_pred HhhcCCCHHHHHHhh
Q 048097 203 GKAFQLDPKIVKDLQ 217 (224)
Q Consensus 203 a~af~~~~~~v~~l~ 217 (224)
+++|++|++++++|+
T Consensus 171 a~af~v~~~~v~~l~ 185 (434)
T 2ea7_A 171 EASFDSDFKEINRVL 185 (434)
T ss_dssp HHHHTSCHHHHHHHH
T ss_pred HHHhCCCHHHHHhhh
Confidence 999999999999999
No 19
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=99.91 E-value=3.5e-24 Score=198.94 Aligned_cols=154 Identities=14% Similarity=0.161 Sum_probs=125.9
Q ss_pred CCCeeeecCCCCCCccCCCCeeEEEccc--cccCcccccc-eEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEe
Q 048097 57 AEDFFLSGLDKPGNTENRLGFNVTNANV--EQIPGLNTLG-TSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVT 133 (224)
Q Consensus 57 ~~df~f~~~~~~~~~~~~~g~~v~~~~~--~~~p~L~~lg-is~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~ 133 (224)
.+.|+|......... ...++.+..++. .+.|+++++| +++++++++|||+++|| |++++|++||++|++++++++
T Consensus 46 ~~p~vf~~~~~~~~i-~~e~G~i~~l~~~~~~~~~l~~~g~~s~~~~~l~Pgg~~~pH-h~~a~E~~yVl~G~g~v~~v~ 123 (445)
T 2cav_A 46 NNPYLFRSNKFLTLF-KNQHGSLRLLQRFNEDTEKLENLRDYRVLEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLVN 123 (445)
T ss_dssp CCTTEECGGGEEEEE-EETTEEEEEECCTTSSCSTTGGGTTEEEEEEEECSSEEEEEE-EESSEEEEEEEESEEEEEEEE
T ss_pred CCCeEEchhhcCceE-EcCCEEEEEEeccCcccccccccCcEEEEEEEECCCcCccCc-CCCCceEEEEEeCEEEEEEEe
Confidence 456777654432222 224666777644 5667999988 99999999999999999 778999999999999999998
Q ss_pred CCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCC-CCcEEEEEEEe-CCCCce---eech-----hhhhcCCCCCCHHHHH
Q 048097 134 SNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIG-KTSAVAFAGFS-SQFPGV---ITIA-----DTVFGANPPINPDFLG 203 (224)
Q Consensus 134 ~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G-~~~a~~l~~~~-s~~pg~---~~~~-----~~lf~~~p~~p~~vLa 203 (224)
++ ++ +++.|++||++++|+|..||++|.| +++++++++++ +++|+. +.++ .++|+ ++|++||+
T Consensus 124 ~~---~~-~~~~l~~GDv~~~P~G~~H~~~N~g~~~~l~~l~v~~~~~~pg~~~~F~laG~~~~~~~~~---~~~~~vLa 196 (445)
T 2cav_A 124 PD---GR-DTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAITFRRPGTVEDFFLSSTKRLPSYLS---AFSKNFLE 196 (445)
T ss_dssp TT---EE-EEEEEETTEEEEECTTCCEEEEECCSSCCEEEEEEEECCSSTTCCCEEESSCCSSCCCGGG---GSCHHHHH
T ss_pred CC---CC-EEEEecCCCEEEECCCCcEEEEECCCCCCEEEEEEeccCCCCCceeeeeccCCCchhhhhh---cCCHHHHH
Confidence 65 44 6799999999999999999999999 89999999887 666763 3344 36787 49999999
Q ss_pred hhcCCCHHHHHHhhhh
Q 048097 204 KAFQLDPKIVKDLQDK 219 (224)
Q Consensus 204 ~af~~~~~~v~~l~~~ 219 (224)
++|++|++++++|+++
T Consensus 197 ~af~v~~~~v~~l~~~ 212 (445)
T 2cav_A 197 ASYDSPYDEIEQTLLQ 212 (445)
T ss_dssp HHHTSCHHHHHHHTTS
T ss_pred HHhCCCHHHHHhhhcc
Confidence 9999999999999953
No 20
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.91 E-value=3.8e-24 Score=197.18 Aligned_cols=154 Identities=17% Similarity=0.196 Sum_probs=124.4
Q ss_pred CCCeeee-cCCCCCCccCCCCeeEEEccc--cccCcccccc-eEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEE
Q 048097 57 AEDFFLS-GLDKPGNTENRLGFNVTNANV--EQIPGLNTLG-TSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFV 132 (224)
Q Consensus 57 ~~df~f~-~~~~~~~~~~~~g~~v~~~~~--~~~p~L~~lg-is~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v 132 (224)
.+.|+|+ ........ ...|+++..+.. .+.+.|++++ +++++++++||++++|| |++++|++||++|+++++++
T Consensus 8 ~~p~~f~~~~~~~~~~-~~e~G~ir~l~~~~~~~~~l~~~~~~s~~~~~l~PGg~~~pH-h~~a~E~~yVl~G~g~v~~v 85 (416)
T 1uij_A 8 NNPFYFRSSNSFQTLF-ENQNGRIRLLQRFNKRSPQLENLRDYRIVQFQSKPNTILLPH-HADADFLLFVLSGRAILTLV 85 (416)
T ss_dssp SCTTEECGGGSEEEEE-ECSSEEEEEECCHHHHCGGGGGGTTCEEEEEEECTTEEEEEE-EESEEEEEEEEESCEEEEEE
T ss_pred CCCeEecccccccceE-EcCCEEEEEEeccCCccccccCcccEEEEEEEeccCcCcccc-cCCCceEEEEEeeEEEEEEE
Confidence 3567776 32222222 345667887633 4558899988 99999999999999999 77899999999999999999
Q ss_pred eCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCC-CCcEEEEEEEe-CCCCcee---echh-----hhhcCCCCCCHHHH
Q 048097 133 TSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIG-KTSAVAFAGFS-SQFPGVI---TIAD-----TVFGANPPINPDFL 202 (224)
Q Consensus 133 ~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G-~~~a~~l~~~~-s~~pg~~---~~~~-----~lf~~~p~~p~~vL 202 (224)
+++ +..++.|++||+++||+|..||++|.| ++++++++++. +++||.+ .++. ++|+ ++|++||
T Consensus 86 ~~~----~~~~~~l~~GDv~~iP~G~~H~~~N~gg~e~l~~l~~~~~~~~pg~~~~f~l~g~~~~~~~~~---~~~~~vL 158 (416)
T 1uij_A 86 NND----DRDSYNLHPGDAQRIPAGTTYYLVNPHDHQNLKMIWLAIPVNKPGRYDDFFLSSTQAQQSYLQ---GFSHNIL 158 (416)
T ss_dssp CSS----CEEEEEECTTEEEEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEEESSCBSSCCCGGG---GSCHHHH
T ss_pred ECC----CCeEEEecCCCEEEECCCCeEEEEecCCCCCEEEEEEeccCCCCCcceeeeecCCcccchhhh---cCCHHHH
Confidence 763 445789999999999999999999995 99999999986 5677643 4443 4677 4999999
Q ss_pred HhhcCCCHHHHHHhh-hh
Q 048097 203 GKAFQLDPKIVKDLQ-DK 219 (224)
Q Consensus 203 a~af~~~~~~v~~l~-~~ 219 (224)
+++|++|++++++|+ ++
T Consensus 159 a~af~v~~~~v~~l~~~~ 176 (416)
T 1uij_A 159 ETSFHSEFEEINRVLFGE 176 (416)
T ss_dssp HHHHTSCHHHHHHHHTCT
T ss_pred HHHhCcCHHHHHhhhhcc
Confidence 999999999999999 54
No 21
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=99.91 E-value=4.7e-24 Score=199.76 Aligned_cols=135 Identities=20% Similarity=0.313 Sum_probs=116.3
Q ss_pred CeeEEEccccccCcccccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeE-------------
Q 048097 76 GFNVTNANVEQIPGLNTLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLI------------- 142 (224)
Q Consensus 76 g~~v~~~~~~~~p~L~~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~------------- 142 (224)
|+ ++.+...++|+|+++|++++|++++|||+++|||| +|+|++||++|+++++|+.++. ++.|
T Consensus 28 ~G-~~e~~~~~~~~L~~~gvs~~R~~i~pggl~lPh~~-~A~ei~~V~qG~g~~G~v~p~~--~e~f~~~~~~~~~~~~~ 103 (496)
T 3ksc_A 28 GG-LIETWNPNNKQFRCAGVALSRATLQRNALRRPYYS-NAPQEIFIQQGNGYFGMVFPGC--PETFEEPQESEQGEGRR 103 (496)
T ss_dssp TE-EEEECCTTSHHHHHHTCEEEEEEECTTEEEEEEEE-SSCEEEEEEECCEEEEEECTTC--CCC--------------
T ss_pred Cc-EEEeccccchhhccCCceEEEEEecCCCEeCceEc-CCCEEEEEEeCceEEEEEeCCC--Cccchhhhhcccccccc
Confidence 44 66677789999999999999999999999999999 7999999999999999998741 1222
Q ss_pred -------EEEecCCCEEEEcCCCeeEEEeCCCCcEEEEEEEeCCCCc--------eeech--------------------
Q 048097 143 -------AKVLNKGDVFVFPIGLIHFQVNIGKTSAVAFAGFSSQFPG--------VITIA-------------------- 187 (224)
Q Consensus 143 -------~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l~~~~s~~pg--------~~~~~-------------------- 187 (224)
.+.|++||+|+||+|++||++|.|+++++++++|+..|+. .+.++
T Consensus 104 ~~d~~qk~~~l~~GDV~viPaG~~h~~~N~G~~~lv~v~~~d~~n~~NQld~~~r~F~LaG~~~~~~~~~~~~~~~~~~~ 183 (496)
T 3ksc_A 104 YRDRHQKVNRFREGDIIAVPTGIVFWMYNDQDTPVIAVSLTDIRSSNNQLDQMPRRFYLAGNHEQEFLQYQHQQGGKQEQ 183 (496)
T ss_dssp -CCCCCCEEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTCTTCCSCSSCCEEESSSSCCCTTGGGCC--------
T ss_pred cccchheeeccCCCCEEEECCCCcEEEEcCCCCCEEEEEEeccCcccccCCCceeeeEecCCCccccccccccccccccc
Confidence 3599999999999999999999999999999999765532 23332
Q ss_pred ----hhhhcCCCCCCHHHHHhhcCCCHHHHHHhh
Q 048097 188 ----DTVFGANPPINPDFLGKAFQLDPKIVKDLQ 217 (224)
Q Consensus 188 ----~~lf~~~p~~p~~vLa~af~~~~~~v~~l~ 217 (224)
.++|+ +++.++|+.||+++.++++||+
T Consensus 184 ~~~~~ni~s---gF~~e~La~Af~v~~e~~~kl~ 214 (496)
T 3ksc_A 184 ENEGNNIFS---GFKRDFLEDAFNVNRHIVDRLQ 214 (496)
T ss_dssp ---CCSGGG---GSCHHHHHHHHTCCHHHHHHHT
T ss_pred cccCCCchh---hcCHHHHHHHHCCCHHHHHHHH
Confidence 47888 6999999999999999999998
No 22
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=99.91 E-value=6.2e-24 Score=197.58 Aligned_cols=139 Identities=21% Similarity=0.326 Sum_probs=118.4
Q ss_pred CCCeeEEEccccccCcccccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeE-----------
Q 048097 74 RLGFNVTNANVEQIPGLNTLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLI----------- 142 (224)
Q Consensus 74 ~~g~~v~~~~~~~~p~L~~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~----------- 142 (224)
.-|+.+...+..+ +.|+++|++++|++++|||+++|||| +++|++||++|+++++++.++. ++.|
T Consensus 30 se~G~~e~~d~~~-~~l~~~gvs~~R~~i~P~gl~~Ph~h-~a~ei~yV~qG~g~~g~v~pgc--~etf~~~~~~~~~~~ 105 (465)
T 3qac_A 30 AERGLTEVWDSNE-QEFRCAGVSVIRRTIEPHGLLLPSFT-SAPELIYIEQGNGITGMMIPGC--PETYESGSQQFQGGE 105 (465)
T ss_dssp ETTEEEEECCTTS-HHHHHHTCEEEEEEECTTEEEEEEEE-SSCEEEEEEECEEEEEEECTTC--CCCC-----------
T ss_pred CCCcEEEEECCCC-hhhcccceEEEEEEEcCCcCcccEEc-CCCEEEEEEECcEEEEEecCCC--Cceeecchhcccccc
Confidence 4566677776544 79999999999999999999999999 8999999999999999997641 2222
Q ss_pred -------------------------EEEecCCCEEEEcCCCeeEEEeCCCCcEEEEEEEeCCC---------Cceeech-
Q 048097 143 -------------------------AKVLNKGDVFVFPIGLIHFQVNIGKTSAVAFAGFSSQF---------PGVITIA- 187 (224)
Q Consensus 143 -------------------------~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l~~~~s~~---------pg~~~~~- 187 (224)
.+.+++||++++|+|+.||++|.|++++++++++++.| +..+.++
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~d~hqk~~~~~~GDvi~iPaG~~hw~~N~G~~~lv~v~~~d~~n~~nqld~~~~r~F~LaG 185 (465)
T 3qac_A 106 DERIREQGSRKFGMRGDRFQDQHQKIRHLREGDIFAMPAGVSHWAYNNGDQPLVAVILIDTANHANQLDKNFPTRFYLAG 185 (465)
T ss_dssp -------------------CCCCCCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEECTTSTTCCSCSSSCCEEESSS
T ss_pred ccccccccccccccccccccccccceeeecCCCEEEECCCCeEEEEcCCCCCEEEEEEEcCCCcccccccccceeEEecC
Confidence 46899999999999999999999999999999998643 4445554
Q ss_pred -----------------------hhhhcCCCCCCHHHHHhhcCCCHHHHHHhhhh
Q 048097 188 -----------------------DTVFGANPPINPDFLGKAFQLDPKIVKDLQDK 219 (224)
Q Consensus 188 -----------------------~~lf~~~p~~p~~vLa~af~~~~~~v~~l~~~ 219 (224)
.++|+ ++++++|+++|+++.++++||++.
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~ni~s---gF~~e~La~Af~v~~~~~~kl~~~ 237 (465)
T 3qac_A 186 KPQQEHSGEHQFSRESRRGERNTGNIFR---GFETRLLAESFGVSEEIAQKLQAE 237 (465)
T ss_dssp CCCCSCC--------------CCCCGGG---GSCHHHHHHHHTCCHHHHHHHHTT
T ss_pred CCccccccccccccccccccccccchhh---cCCHHHHHHHhCCCHHHHHHhhhc
Confidence 36888 699999999999999999999865
No 23
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=99.91 E-value=4.9e-24 Score=195.30 Aligned_cols=152 Identities=15% Similarity=0.119 Sum_probs=125.1
Q ss_pred CCCeeeecCC-CCCCccCCCCeeEEEc--cccccCcccccc-eEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEE
Q 048097 57 AEDFFLSGLD-KPGNTENRLGFNVTNA--NVEQIPGLNTLG-TSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFV 132 (224)
Q Consensus 57 ~~df~f~~~~-~~~~~~~~~g~~v~~~--~~~~~p~L~~lg-is~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v 132 (224)
.+.|+|.... ..... ...|+.+..+ ...+.|+|+++| +++++++++|||+++|||| +++|++||++|+++++++
T Consensus 11 ~~p~~f~~~~~~~~~~-~~e~G~i~~l~~~~~~~~~l~~~~~~s~~~~~l~pgg~~~ph~~-~a~ei~yVl~G~~~v~~v 88 (397)
T 2phl_A 11 DNPFYFNSDNSWNTLF-KNQYGHIRVLQRFDQQSKRLQNLEDYRLVEFRSKPETLLLPQQA-DAELLLVVRSGSAILVLV 88 (397)
T ss_dssp CCTTEECGGGTEEEEE-EETTEEEEEECCHHHHCGGGGGGTTCEEEEEEECSSEEEEEEEE-SEEEEEEEEESEEEEEEE
T ss_pred CCCcEeccchhccceE-EcCCEEEEEecccCCCChhhcccccEEEEEEEECCCcCccCEec-CCCeEEEEEeeeEEEEEE
Confidence 4567776443 22222 4556778876 556679999998 9999999999999999999 699999999999999999
Q ss_pred eCCCCCCeeEEEEecCCCE------EEEcCCCeeEEEeCC-CCcEEEEEEEeCCC-C--ceeech-----hhhhcCCCCC
Q 048097 133 TSNQLNNTLIAKVLNKGDV------FVFPIGLIHFQVNIG-KTSAVAFAGFSSQF-P--GVITIA-----DTVFGANPPI 197 (224)
Q Consensus 133 ~~~~~~~k~~~~~l~~GDv------~v~P~G~~H~~~N~G-~~~a~~l~~~~s~~-p--g~~~~~-----~~lf~~~p~~ 197 (224)
+++ ++ .++.|++||+ ++||+|++||++|.| ++++++++++++.+ | ..+.++ .++|+ ++
T Consensus 89 ~~~---~~-~~~~l~~GDv~~~~~~~~iP~G~~h~~~N~g~~~~l~~i~~~~~~~~~~~~~f~L~G~~~~~s~~~---~~ 161 (397)
T 2phl_A 89 KPD---DR-REYFFLTSDNPIFSDHQKIPAGTIFYLVNPDPKEDLRIIQLAMPVNNPQIHEFFLSSTEAQQSYLQ---EF 161 (397)
T ss_dssp ETT---TE-EEEEEEESSCTTSCSEEEECTTCEEEEEECCSSCCEEEEEEEEESSSSSCCEEECCCBTTBCCGGG---GS
T ss_pred eCC---Cc-EEEEECCCCcccccceEEECCCCcEEEEeCCCCCCeEEEEeecCCCCccceeeeccCCCchhHHhh---cC
Confidence 876 55 4799999999 999999999999999 78999999887443 3 334443 24677 49
Q ss_pred CHHHHHhhcCCCHHHHHHhh
Q 048097 198 NPDFLGKAFQLDPKIVKDLQ 217 (224)
Q Consensus 198 p~~vLa~af~~~~~~v~~l~ 217 (224)
|++||+++|+++.+++++|+
T Consensus 162 ~~~vLa~af~v~~~~v~~l~ 181 (397)
T 2phl_A 162 SKHILEASFNSKFEEINRVL 181 (397)
T ss_dssp CHHHHHHHHTSCHHHHHHHH
T ss_pred CHHHHHHHhCCCHHHHHhhh
Confidence 99999999999999999999
No 24
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.91 E-value=4.8e-24 Score=199.40 Aligned_cols=139 Identities=17% Similarity=0.225 Sum_probs=116.7
Q ss_pred CCeeEEEccccccCcccccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCe-e------------
Q 048097 75 LGFNVTNANVEQIPGLNTLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNT-L------------ 141 (224)
Q Consensus 75 ~g~~v~~~~~~~~p~L~~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k-~------------ 141 (224)
-++ .+.+...+.|+|+++|++++|++++|||+++||||+ ++|++||++|++++++++++ ++ .
T Consensus 29 e~G-~~e~~~~~~~~l~~~gvs~~r~~l~Pggl~~Ph~~~-a~ei~yV~~G~g~~g~v~pg---~~et~~~~~~~~~~~~ 103 (476)
T 1fxz_A 29 EGG-LIETWNPNNKPFQCAGVALSRCTLNRNALRRPSYTN-GPQEIYIQQGKGIFGMIYPG---CPSTFEEPQQPQQRGQ 103 (476)
T ss_dssp TTE-EEEECCTTSHHHHHHTCEEEEEEECTTEEEEEEEES-SCEEEEEEECCEEEEEECTT---CCCC------------
T ss_pred CCc-eEEeeCCCChhhccCceEEEEEEEcCCCEecceecC-CceEEEEEecEEEEEEEcCC---Ccchhhcccccccccc
Confidence 345 344466667999999999999999999999999997 89999999999999999864 22 0
Q ss_pred ---------EEEEecCCCEEEEcCCCeeEEEeCCCCcEEEEEEEeCCCC--------ceeech-----------------
Q 048097 142 ---------IAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAFAGFSSQFP--------GVITIA----------------- 187 (224)
Q Consensus 142 ---------~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l~~~~s~~p--------g~~~~~----------------- 187 (224)
..+.|++||+++||+|++||++|.|+++++++++++..++ ..+.++
T Consensus 104 ~~~~~d~~qk~~~l~~GDvi~iPaG~~h~~~N~G~~~l~~i~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~ 183 (476)
T 1fxz_A 104 SSRPQDRHQKIYNFREGDLIAVPTGVAWWMYNNEDTPVVAVSIIDTNSLENQLDQMPRRFYLAGNQEQEFLKYQQEQGGH 183 (476)
T ss_dssp ------CCCCEEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTCTTCCSCSSCCEEESSSSCCCTTHHHHC-----
T ss_pred ccccccccceEEEEeCCCEEEECCCCcEEEEeCCCCCEEEEEEecCCCcccccCCccceeeccCCccccccccccccccc
Confidence 2578999999999999999999999999999999985443 344443
Q ss_pred ---------------hhhhcCCCCCCHHHHHhhcCCCHHHHHHhhhhhc
Q 048097 188 ---------------DTVFGANPPINPDFLGKAFQLDPKIVKDLQDKFI 221 (224)
Q Consensus 188 ---------------~~lf~~~p~~p~~vLa~af~~~~~~v~~l~~~~~ 221 (224)
.++|+ ++++++|+++|++|.++++||+++..
T Consensus 184 ~~~~~~~~~~~~~~~~~if~---gf~~~vLa~af~v~~~~~~kl~~~~~ 229 (476)
T 1fxz_A 184 QSQKGKHQQEEENEGGSILS---GFTLEFLEHAFSVDKQIAKNLQGENE 229 (476)
T ss_dssp --------------CCCGGG---GSCHHHHHHHHTCCHHHHHHHSCC--
T ss_pred cccccccccccccccchhhh---cCCHHHHHhhhCCCHHHHHhhhcccc
Confidence 36887 59999999999999999999997653
No 25
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=99.90 E-value=1.3e-23 Score=193.71 Aligned_cols=134 Identities=19% Similarity=0.255 Sum_probs=109.5
Q ss_pred CCeeEEEcc-----ccccCcccccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCC
Q 048097 75 LGFNVTNAN-----VEQIPGLNTLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKG 149 (224)
Q Consensus 75 ~g~~v~~~~-----~~~~p~L~~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~G 149 (224)
-.+.+..+. ...+|+|+ ++++++++++|+|+++|| |++|+|++||++|++++++++++ +.+.+.|++|
T Consensus 21 e~G~i~~l~~f~~~s~~l~~l~--~~~l~~~~l~p~gl~~Ph-h~~A~ei~yV~~G~g~~g~V~~~----~~~~~~l~~G 93 (418)
T 3s7i_A 21 QNGRIRVLQRFDQRSRQFQNLQ--NHRIVQIEAKPNTLVLPK-HADADNILVIQQGQATVTVANGN----NRKSFNLDEG 93 (418)
T ss_dssp SSEEEEEECCHHHHCGGGGGGT--TCEEEEEEECTTEEEEEE-EESEEEEEEEEESEEEEEEECSS----CEEEEEEETT
T ss_pred CCcEEEEecccCCcchhccccc--ceEEEEEEecCCceeeee-eCCCCeEEEEEEeeEEEEEEecC----CEEEEEecCC
Confidence 345577663 35677777 467778899999999999 89999999999999999999874 4568999999
Q ss_pred CEEEEcCCCeeEEEeCCCCc-EEEEE-EEeCCCCceeec---h-----hhhhcCCCCCCHHHHHhhcCCCHHHHHHhhh
Q 048097 150 DVFVFPIGLIHFQVNIGKTS-AVAFA-GFSSQFPGVITI---A-----DTVFGANPPINPDFLGKAFQLDPKIVKDLQD 218 (224)
Q Consensus 150 Dv~v~P~G~~H~~~N~G~~~-a~~l~-~~~s~~pg~~~~---~-----~~lf~~~p~~p~~vLa~af~~~~~~v~~l~~ 218 (224)
|+++||+|++||++|.|..+ +++++ .+++++||.+.. + .++|+ ++|++||+++|+++++++++|++
T Consensus 94 Dv~~~P~G~~h~~~N~g~~~~l~i~~l~~~s~~pg~~~~f~laG~~~~~s~~~---gf~~evLa~af~v~~~~v~kl~~ 169 (418)
T 3s7i_A 94 HALRIPSGFISYILNRHDNQNLRVAKISMPVNTPGQFEDFFPASSRDQSSYLQ---GFSRNTLEAAFNAEFNEIRRVLL 169 (418)
T ss_dssp EEEEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEECSSCCSSCCCGGG---GSCHHHHHHHHTSCHHHHHHHTT
T ss_pred CEEEECCCCeEEEEecCCCccEEEEEeecCcCCCCccceeeccCCcchhHHhh---cCCHHHHHHHHCcCHHHHHhhhc
Confidence 99999999999999988654 44443 357778876432 1 35787 59999999999999999999984
No 26
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.89 E-value=9.3e-23 Score=191.35 Aligned_cols=141 Identities=22% Similarity=0.362 Sum_probs=116.9
Q ss_pred CeeEEEccccccCcccccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCC-------------C--C-
Q 048097 76 GFNVTNANVEQIPGLNTLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQL-------------N--N- 139 (224)
Q Consensus 76 g~~v~~~~~~~~p~L~~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~-------------~--~- 139 (224)
|+ ++.+...+.|+|+++|+++++++++|||+++||||+ ++|++||++|+++++++.++.. + +
T Consensus 27 ~G-~~e~~~~~~~~l~~~gv~~~r~~i~pggl~~Ph~~~-~~~i~yV~~G~g~vg~v~pgc~et~~~~~~~~~~~~~~~~ 104 (493)
T 2d5f_A 27 GG-LIETWNSQHPELQCAGVTVSKRTLNRNGLHLPSYSP-YPQMIIVVQGKGAIGFAFPGCPETFEKPQQQSSRRGSRSQ 104 (493)
T ss_dssp SE-EEEECCTTSHHHHHHTCEEEEEEECTTEEEEEEECS-SCEEEEEEECEEEEEECCTTCCCCEEECC-----------
T ss_pred Cc-EEEEeCCCChhhccCCEEEEEEEeCCCcEeCceecC-CCeEEEEEeCEEEEEEEeCCCccccccccccccccccccc
Confidence 55 666777788999999999999999999999999997 7899999999999999965410 0 0
Q ss_pred -----e-eEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEEEEEeCC---C-----Cceeech------------------
Q 048097 140 -----T-LIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAFAGFSSQ---F-----PGVITIA------------------ 187 (224)
Q Consensus 140 -----k-~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l~~~~s~---~-----pg~~~~~------------------ 187 (224)
. -..+.|++||+++||+|++||++|.|+++++++++++.. | +..+.++
T Consensus 105 ~~~~d~~qkv~~l~~GDvi~iPaG~~h~~~N~g~~~l~~v~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~ 184 (493)
T 2d5f_A 105 QQLQDSHQKIRHFNEGDVLVIPPGVPYWTYNTGDEPVVAISLLDTSNFNNQLDQNPRVFYLAGNPDIEHPETMQQQQQQK 184 (493)
T ss_dssp --CSEEESCEEEEETTEEEEECTTCCEEEEECSSSCEEEEEEECTTCTTCCSCSSCCCEESSSCCCCSCGGGTC------
T ss_pred cccccccceEEEecCCCEEEECCCCcEEEEeCCCCCEEEEEEecCcCcccccccccceeeccCCccccchhhhhhccccc
Confidence 0 013589999999999999999999999999999998733 3 2334443
Q ss_pred -----------------hhhhcCCCCCCHHHHHhhcCCCHHHHHHhhhhhc
Q 048097 188 -----------------DTVFGANPPINPDFLGKAFQLDPKIVKDLQDKFI 221 (224)
Q Consensus 188 -----------------~~lf~~~p~~p~~vLa~af~~~~~~v~~l~~~~~ 221 (224)
.++|+ ++++++|+++|+++.+++++|++...
T Consensus 185 ~~~~~~~~~~~~~~~~~~nif~---gf~~e~La~aF~v~~~~v~kl~~~~~ 232 (493)
T 2d5f_A 185 SHGGRKQGQHQQQEEEGGSVLS---GFSKHFLAQSFNTNEDTAEKLRSPDD 232 (493)
T ss_dssp ---------------CCCCGGG---GSCHHHHHHHTTCCHHHHHHTTCTTC
T ss_pred ccccccccccccccccccchhh---cCCHHHHHhHhCCCHHHHHHhhhccc
Confidence 36887 59999999999999999999997654
No 27
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=99.88 E-value=2.6e-22 Score=186.73 Aligned_cols=139 Identities=19% Similarity=0.256 Sum_probs=116.1
Q ss_pred CCCeeEEEccccccCcccccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeE-----------
Q 048097 74 RLGFNVTNANVEQIPGLNTLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLI----------- 142 (224)
Q Consensus 74 ~~g~~v~~~~~~~~p~L~~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~----------- 142 (224)
.-++.+...+..+ |+|+++|++++|++++|||+++||||+ ++|++||++|+++++|+.+.- .+.|
T Consensus 23 se~G~~e~w~~~~-~~L~~~gvs~~r~~i~p~Gl~lPh~~~-a~e~~~V~~G~g~~G~v~pgc--~et~~~~~~~~~~~~ 98 (466)
T 3kgl_A 23 AEAGRIEVWDHHA-PQLRCSGVSFVRYIIESKGLYLPSFFS-TAKLSFVAKGEGLMGRVVPGC--AETFQDSSVFQPGGG 98 (466)
T ss_dssp ETTEEEEECCTTS-HHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEEECTTC--CCCEEECCSSCCCC-
T ss_pred CCCcEEEEECCCC-hhhccCCeEEEEEEECCCCEeCCeeCC-CCeEEEEEeCeEEEEEecCCC--cchhhcccccccccc
Confidence 3456566666665 999999999999999999999999997 999999999999999997630 0000
Q ss_pred -----------------------------------------------EEEecCCCEEEEcCCCeeEEEeCCCCcEEEEEE
Q 048097 143 -----------------------------------------------AKVLNKGDVFVFPIGLIHFQVNIGKTSAVAFAG 175 (224)
Q Consensus 143 -----------------------------------------------~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l~~ 175 (224)
...|++||+++||+|.+||++|.|++++++++.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~l~~GDvi~iPaG~~~~~~N~g~e~L~~l~~ 178 (466)
T 3kgl_A 99 SPFGEGQGQGQQGQGQGHQGQGQGQQGQQGQQGQQSQGQGFRDMHQKVEHIRTGDTIATHPGVAQWFYNDGNQPLVIVSV 178 (466)
T ss_dssp ----------------------------------------CCEEESCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEE
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccceeeccccCCCEEEECCCCcEEEEeCCCCcEEEEEE
Confidence 148999999999999999999999999999999
Q ss_pred EeCCCC--------ceeech------------------hhhhcCCCCCCHHHHHhhcCCCHHHHHHhhhh
Q 048097 176 FSSQFP--------GVITIA------------------DTVFGANPPINPDFLGKAFQLDPKIVKDLQDK 219 (224)
Q Consensus 176 ~~s~~p--------g~~~~~------------------~~lf~~~p~~p~~vLa~af~~~~~~v~~l~~~ 219 (224)
++..|+ ..+.++ .++|+ +++.++|+++|+++.++++||++.
T Consensus 179 ~d~~n~~nQld~~~~~F~LaG~~~~~~~~~~~~~~~~~~ni~s---GF~~e~La~Af~v~~e~~~kL~~~ 245 (466)
T 3kgl_A 179 LDLASHQNQLDRNPRPFYLAGNNPQGQVWIEGREQQPQKNILN---GFTPEVLAKAFKIDVRTAQQLQNQ 245 (466)
T ss_dssp EESSSTTCCSCSSCCEEESSCCBTTCCTTSTTCTTCCBCCGGG---GSCHHHHHHHHTSCHHHHHHHTCT
T ss_pred EcCCCcccccCCceeeeEecCCCccccccccccccccCCCccc---cCCHHHHHHHhCCCHHHHHHHhcc
Confidence 865443 344444 26787 599999999999999999999865
No 28
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=99.87 E-value=3.8e-22 Score=187.51 Aligned_cols=140 Identities=21% Similarity=0.314 Sum_probs=115.4
Q ss_pred CCeeEEEccccccCcccccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCC---------CCe-----
Q 048097 75 LGFNVTNANVEQIPGLNTLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQL---------NNT----- 140 (224)
Q Consensus 75 ~g~~v~~~~~~~~p~L~~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~---------~~k----- 140 (224)
-|+ ++.+...+.|+|+++|++++|++++|||+++||||+ ++|++||++|++.++++.++.. +++
T Consensus 29 e~G-~~e~~~~~~~~l~~~gvs~~r~~i~p~gl~lPh~~~-a~~~~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~~ 106 (510)
T 3c3v_A 29 EGG-YIETWNPNNQEFECAGVALSRLVLRRNALRRPFYSN-APQEIFIQQGRGYFGLIFPGCPSTYEEPAQQGRRYQSQR 106 (510)
T ss_dssp TTE-EEEECCTTSHHHHHHTCEEEEEEECTTEEEEEEECS-SCEEEEEEECCEEEEEECTTCCCCEEEECCC--------
T ss_pred CCc-eEEEeCCCCcccccCcEEEEEEEECCCCCccceecC-CCeEEEEEeCEEEEEEEeCCCcccccccccccccccccc
Confidence 344 566667777999999999999999999999999997 8999999999999999986410 000
Q ss_pred ----------------e--EEEEecCCCEEEEcCCCeeEEEeCCCCcEEEEEEEeCCCC--------ceeech-------
Q 048097 141 ----------------L--IAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAFAGFSSQFP--------GVITIA------- 187 (224)
Q Consensus 141 ----------------~--~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l~~~~s~~p--------g~~~~~------- 187 (224)
. ..+.|++||+++||+|++||++|.|+++++++++++..|+ ..+.++
T Consensus 107 ~~~~~~~~~~~~~~~d~~qkv~~v~~GDvi~iPaG~~hw~~N~g~~~l~~v~~~d~~n~~nqld~~~r~F~LaG~~~~~~ 186 (510)
T 3c3v_A 107 PPRRLQEEDQSQQQQDSHQKVHRFNEGDLIAVPTGVAFWLYNDHDTDVVAVSLTDTNNNDNQLDQFPRRFNLAGNHEQEF 186 (510)
T ss_dssp ------------CEEEEESCCEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTBTTCCSCSCCCCEESSCCCCCTT
T ss_pred ccccccccccccccccccceEEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEeCCCCcccccccccceeEecCCccccc
Confidence 0 1268999999999999999999999999999999976542 233332
Q ss_pred -----------------------------------------------------hhhhcCCCCCCHHHHHhhcCCC-HHHH
Q 048097 188 -----------------------------------------------------DTVFGANPPINPDFLGKAFQLD-PKIV 213 (224)
Q Consensus 188 -----------------------------------------------------~~lf~~~p~~p~~vLa~af~~~-~~~v 213 (224)
.++|+ +++.++|+++|+++ ++++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~s---gF~~~~La~af~v~~~~~~ 263 (510)
T 3c3v_A 187 LRYQQQSRQSRRRSLPYSPYSPQSQPRQEEREFSPRGQHSRRERAGQEEEHEGGNIFS---GFTPEFLAQAFQVDDRQIV 263 (510)
T ss_dssp GGGCC------------------------------------------------CCTGG---GSCHHHHHHHHTCCCHHHH
T ss_pred chhhhcccccccccccccccccccccccccccccccccccccccccccccccccccee---cCCHHHHHHHhCCCHHHHH
Confidence 25787 69999999999999 9999
Q ss_pred HHhhhh
Q 048097 214 KDLQDK 219 (224)
Q Consensus 214 ~~l~~~ 219 (224)
++|++.
T Consensus 264 ~~l~~~ 269 (510)
T 3c3v_A 264 QNLRGE 269 (510)
T ss_dssp HHHTTT
T ss_pred HHhhcc
Confidence 999864
No 29
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=99.86 E-value=1.8e-21 Score=182.73 Aligned_cols=141 Identities=21% Similarity=0.307 Sum_probs=114.7
Q ss_pred CCCeeEEEccccccCcccccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCC-CC---------C-----
Q 048097 74 RLGFNVTNANVEQIPGLNTLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSN-QL---------N----- 138 (224)
Q Consensus 74 ~~g~~v~~~~~~~~p~L~~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~-~~---------~----- 138 (224)
.-|+ ++.+...++|+|+++|++++|++++|+|+++||+|+ ++|++||++|++.++|+.+. ++ +
T Consensus 28 se~G-~~e~w~~~~p~l~~~Gvs~~R~~i~p~Gl~lPh~~~-a~el~yV~qG~g~~G~v~Pgcpet~~~~~~~~~~~~~~ 105 (531)
T 3fz3_A 28 AEAG-QIETWNFNQGDFQCAGVAASRITIQRNGLHLPSYSN-APQLIYIVQGRGVLGAVFSGCPETFEESQQSSQQGRQQ 105 (531)
T ss_dssp ETTE-EEEECCTTSHHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEECCTTCCCCEECCCC--------
T ss_pred cCCc-eEEEeCCCChhhccCcceEEEEEecCCCEeCCccCC-CCeEEEEEECcEEEEEEcCCCccccccccccccccccc
Confidence 3455 455555779999999999999999999999999998 99999999999999999764 10 0
Q ss_pred --------------------------------------------------------------Ce-eEEEEecCCCEEEEc
Q 048097 139 --------------------------------------------------------------NT-LIAKVLNKGDVFVFP 155 (224)
Q Consensus 139 --------------------------------------------------------------~k-~~~~~l~~GDv~v~P 155 (224)
++ -....+++||++.+|
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~vr~GDviaiP 185 (531)
T 3fz3_A 106 EQEQERQQQQQGEQGRQQGQQEQQQERQGRQQGRQQQEEGRQQEQQQGQQGRPQQQQQFRQLDRHQKTRRIREGDVVAIP 185 (531)
T ss_dssp -----------------------------------------------------------CCSCEESCCEEEETTEEEEEC
T ss_pred cccccccccccccccccccccccccccccccccchhccccccccccccccccccccccccccccceeeecccCCcEEEEC
Confidence 00 002478999999999
Q ss_pred CCCeeEEEeCCCCcEEEEEEEeCCC--------Cceeech----------------------------------------
Q 048097 156 IGLIHFQVNIGKTSAVAFAGFSSQF--------PGVITIA---------------------------------------- 187 (224)
Q Consensus 156 ~G~~H~~~N~G~~~a~~l~~~~s~~--------pg~~~~~---------------------------------------- 187 (224)
+|..||++|.|+++++++++++..| |..+.++
T Consensus 186 aG~~~w~yN~G~~~l~iv~~~Dt~n~~NQld~~~r~F~LAGn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (531)
T 3fz3_A 186 AGVAYWSYNDGDQELVAVNLFHVSSDHNQLDQNPRKFYLAGNPENEFNQQGQSQPRQQGEQGRPGQHQQPFGRPRQQEQQ 265 (531)
T ss_dssp TTCCEEEECCSSSCEEEEEEEETTCTTCCSCSSCCEEESSSCCCCTTCC-------------------------------
T ss_pred CCCeEEEEeCCCceEEEEEEEccccccccCCCccceeEEcCCCcccccccccccccccccccccccccccccccchhhhc
Confidence 9999999999999999999885432 2222222
Q ss_pred ---hhhhcCCCCCCHHHHHhhcCCCHHHHHHhhhh
Q 048097 188 ---DTVFGANPPINPDFLGKAFQLDPKIVKDLQDK 219 (224)
Q Consensus 188 ---~~lf~~~p~~p~~vLa~af~~~~~~v~~l~~~ 219 (224)
.++|+ +++.++|++||+++.++++||+..
T Consensus 266 ~~~~nifs---GFs~e~La~A~~v~~~~a~kLq~~ 297 (531)
T 3fz3_A 266 GNGNNVFS---GFNTQLLAQALNVNEETARNLQGQ 297 (531)
T ss_dssp -CCSSGGG---GSCHHHHHHHHTSCHHHHHHHHTS
T ss_pred ccCCCeee---cCCHHHHHHHHCCCHHHHHHHhcc
Confidence 36898 699999999999999999999864
No 30
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.85 E-value=1.6e-20 Score=168.35 Aligned_cols=150 Identities=19% Similarity=0.218 Sum_probs=126.9
Q ss_pred CeeeecCCCCCCccCCCCeeEEEccccccCcccccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCC
Q 048097 59 DFFLSGLDKPGNTENRLGFNVTNANVEQIPGLNTLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLN 138 (224)
Q Consensus 59 df~f~~~~~~~~~~~~~g~~v~~~~~~~~p~L~~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~ 138 (224)
.|.|++...++.. ..|+.++.++..+||.+. ++++.++.++||++.++|||+++.|++||++|++++++++++
T Consensus 20 ~~~~~~~~~~~~~--~~~G~~~~~~~~~~p~~~--~~~~~~~~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~--- 92 (361)
T 2vqa_A 20 AFTYAFSKTPLVL--YDGGTTKQVGTYNFPVSK--GMAGVYMSLEPGAIRELHWHANAAEWAYVMEGRTRITLTSPE--- 92 (361)
T ss_dssp CSEECGGGSCCEE--ETTEEEEEESTTTCTTCC--SCEEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECTT---
T ss_pred ceEEEcccCCcee--cCCceEEEeChhhCcccc--ceeeEEEEEcCCCCCCceeCCCCCEEEEEEEeEEEEEEEeCC---
Confidence 3778876665433 367889999999999987 569999999999999999999899999999999999998765
Q ss_pred CeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEEEEEeCCCCc---eeechhhhhcCCCCCCHHHHHhhcCCCHHHHHH
Q 048097 139 NTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAFAGFSSQFPG---VITIADTVFGANPPINPDFLGKAFQLDPKIVKD 215 (224)
Q Consensus 139 ~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l~~~~s~~pg---~~~~~~~lf~~~p~~p~~vLa~af~~~~~~v~~ 215 (224)
++.....|++||+++||+|.+|++.|.|+++++++.+++..++. .+.+.++ |+ .+|.++|+++|+++.+.+++
T Consensus 93 g~~~~~~l~~GD~~~ip~g~~H~~~n~~~~~~~~l~v~~~~~~~~~~~~~~~~~-~~---~~p~~vLa~~~~v~~~~~~~ 168 (361)
T 2vqa_A 93 GKVEIADVDKGGLWYFPRGWGHSIEGIGPDTAKFLLVFNDGTFSEGATFSVTDW-LS---HTPIAWVEENLGWTAAQVAQ 168 (361)
T ss_dssp SCEEEEEEETTEEEEECTTCEEEEEECSSSCEEEEEEESSTTCCTTSSEEHHHH-HH---TSCHHHHHHHHTCCHHHHTT
T ss_pred CcEEEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEECCCCccccceecHhHH-HH---hCCHHHHHHHhCcCHHHHHh
Confidence 43335899999999999999999999999999999999877664 4555555 56 39999999999999999998
Q ss_pred hhhh
Q 048097 216 LQDK 219 (224)
Q Consensus 216 l~~~ 219 (224)
|++.
T Consensus 169 l~~~ 172 (361)
T 2vqa_A 169 LPKK 172 (361)
T ss_dssp SCSS
T ss_pred cccc
Confidence 8754
No 31
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=99.83 E-value=2e-19 Score=162.83 Aligned_cols=155 Identities=16% Similarity=0.176 Sum_probs=130.6
Q ss_pred CCCCCeeeecCCCCCCccCCCCeeEEEccccccCcccccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeC
Q 048097 55 AKAEDFFLSGLDKPGNTENRLGFNVTNANVEQIPGLNTLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTS 134 (224)
Q Consensus 55 ~~~~df~f~~~~~~~~~~~~~g~~v~~~~~~~~p~L~~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~ 134 (224)
.....|+|+....++ . ...|+.++.+....+++.+ ++++.+++++||+..++|||+.+.|++||++|++++.+.+.
T Consensus 221 ~~~~~~v~~~~~~~~-~-~~~~g~~~~~~~~~~~~~~--~~~~~~~~l~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~~ 296 (385)
T 1j58_A 221 EVPYPFTYRLLEQEP-I-ESEGGKVYIADSTNFKVSK--TIASALVTVEPGAMRELHWHPNTHEWQYYISGKARMTVFAS 296 (385)
T ss_dssp CCSSCSEEEGGGSCC-E-ECSSEEEEEESTTTSTTCC--SCEEEEEEECTTCEEEEEECSSSCEEEEEEESEEEEEEEEE
T ss_pred CCCCCeeeecccCCC-e-eCCCceEEEeecccCCccc--ceEEEEEEECCCcccCceeCCCCCEEEEEEeCeEEEEEEcC
Confidence 345678888876665 3 2346677888888887654 68999999999999999999977999999999999998755
Q ss_pred CCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEEEEEeCCCCceeechhhhhcCCCCCCHHHHHhhcCCCHHHHH
Q 048097 135 NQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAFAGFSSQFPGVITIADTVFGANPPINPDFLGKAFQLDPKIVK 214 (224)
Q Consensus 135 ~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l~~~~s~~pg~~~~~~~lf~~~p~~p~~vLa~af~~~~~~v~ 214 (224)
+ ++-.++.|++||++++|+|..|++.|.|++++.+++++....+....+.+++ +. +++++++++|++++++++
T Consensus 297 ~---g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~v~~~~~~~d~~~~~~l-~~---~~~~v~~~~f~~~~~~~~ 369 (385)
T 1j58_A 297 D---GHARTFNYQAGDVGYVPFAMGHYVENIGDEPLVFLEIFKDDHYADVSLNQWL-AM---LPETFVQAHLDLGKDFTD 369 (385)
T ss_dssp T---TEEEEEEEESSCEEEECTTCBEEEEECSSSCEEEEEEESSSSCCCEEHHHHH-HT---SCHHHHHHHHTCCHHHHT
T ss_pred C---CcEEEEEEcCCCEEEECCCCeEEEEECCCCCEEEEEEECCCCccccCHHHHH-Hh---CCHHHHHHHhCCCHHHHH
Confidence 4 3334689999999999999999999999999999999988888888887775 42 999999999999999999
Q ss_pred Hhhhhh
Q 048097 215 DLQDKF 220 (224)
Q Consensus 215 ~l~~~~ 220 (224)
+|++..
T Consensus 370 ~l~~~~ 375 (385)
T 1j58_A 370 VLSKEK 375 (385)
T ss_dssp TCCSSC
T ss_pred hhhccC
Confidence 998764
No 32
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=99.82 E-value=8.3e-21 Score=137.03 Aligned_cols=74 Identities=23% Similarity=0.141 Sum_probs=69.9
Q ss_pred eeecCCCCCCccCCCCeeEEEccccccCcccccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCC
Q 048097 61 FLSGLDKPGNTENRLGFNVTNANVEQIPGLNTLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSN 135 (224)
Q Consensus 61 ~f~~~~~~~~~~~~~g~~v~~~~~~~~p~L~~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~ 135 (224)
.|+++.+.|.++|..|. ++.+++.+||+|+++|+|++|+++.|||+++|||||+|+|++||++|++++++++++
T Consensus 3 pfnl~~~~p~~~n~~G~-~~~~~~~~~P~Ln~lgls~~r~~l~~gg~~~PH~hprA~ei~~V~~G~~~v~~V~~~ 76 (79)
T 1dgw_X 3 PFNLRSRDPIYSNNYGK-LYEITPEKNSQLRDLDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGLE 76 (79)
T ss_dssp CEETTSSCCSEECSSEE-EEEECTTTCHHHHTTTEEEEEEEECTTCEEEEEEESSCEEEEEEEESCEEEEEEEEC
T ss_pred ccccccCCCCccCCCCc-EEEEChhhCcccCcCCcceEEEEEcCCcCcCCccCCCCcEEEEEEeceEEEEEecCC
Confidence 47889999999888887 599999999999999999999999999999999999999999999999999999876
No 33
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=99.80 E-value=3.9e-19 Score=160.88 Aligned_cols=146 Identities=16% Similarity=0.201 Sum_probs=123.1
Q ss_pred eeeecCCCCCCccCCCCeeEEEccccccCcccccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCC
Q 048097 60 FFLSGLDKPGNTENRLGFNVTNANVEQIPGLNTLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNN 139 (224)
Q Consensus 60 f~f~~~~~~~~~~~~~g~~v~~~~~~~~p~L~~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~ 139 (224)
++|++...++.. ..|++++.++..++|.++ ++++.++++.||+..++|||+ +.|++||++|++++++++.+ +
T Consensus 48 ~~~~~~~~~~~~--~~~G~~~~~~~~~lp~~~--~~~~~~~~l~pg~~~~~H~H~-~~E~~~Vl~G~~~~~~~~~~---g 119 (385)
T 1j58_A 48 MKFSFSDTHNRL--EKGGYAREVTVRELPISE--NLASVNMRLKPGAIRELHWHK-EAEWAYMIYGSARVTIVDEK---G 119 (385)
T ss_dssp CEECGGGSCCEE--ETTEEEEEECTTTCTTCS--SCEEEEEEECTTCEEEEEEES-SCEEEEEEEEEEEEEEECTT---S
T ss_pred eEEEcccCCccc--cCCcEEEEeccccCcccC--ceEEEEEEECCCCCCCCccCC-hheEEEEEeeeEEEEEEeCC---C
Confidence 777776655533 467889999999999988 789999999999999999999 89999999999999998765 5
Q ss_pred eeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEEEEEeCCCCcee---echhhhhcCCCCCCHHHHHhhcCCCHHHHHHh
Q 048097 140 TLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAFAGFSSQFPGVI---TIADTVFGANPPINPDFLGKAFQLDPKIVKDL 216 (224)
Q Consensus 140 k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l~~~~s~~pg~~---~~~~~lf~~~p~~p~~vLa~af~~~~~~v~~l 216 (224)
+.+.+.|++||+++||+|..|++.|.+ +++.++.+|+...+... .+. ++|+ .+|.++|+++|+++.++++++
T Consensus 120 ~~~~~~l~~GD~~~ip~g~~H~~~n~~-~~~~~~~v~~~~~~~~~~~~~~~-~~~~---~~p~evla~~~~vs~~~~~~l 194 (385)
T 1j58_A 120 RSFIDDVGEGDLWYFPSGLPHSIQALE-EGAEFLLVFDDGSFSENSTFQLT-DWLA---HTPKEVIAANFGVTKEEISNL 194 (385)
T ss_dssp CEEEEEEETTEEEEECTTCCEEEEEEE-EEEEEEEEESCTTCCGGGEEEHH-HHHH---TSCHHHHHHHHTCCTGGGTTS
T ss_pred cEEEEEeCCCCEEEECCCCeEEEEECC-CCEEEEEEECCCCccccchhhhh-hhhh---cccHHHHHHHhCCCHHHHHhc
Confidence 544569999999999999999999997 46888888987776543 344 4566 399999999999999998887
Q ss_pred hh
Q 048097 217 QD 218 (224)
Q Consensus 217 ~~ 218 (224)
++
T Consensus 195 ~~ 196 (385)
T 1j58_A 195 PG 196 (385)
T ss_dssp CS
T ss_pred cc
Confidence 65
No 34
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=99.55 E-value=3.8e-14 Score=108.08 Aligned_cols=84 Identities=18% Similarity=0.216 Sum_probs=72.2
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEE
Q 048097 94 GTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAF 173 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l 173 (224)
++.+.++.++||+..++|||+...|++||++|++++.+.+ ++ ...|++||++++|+|..|.+.|.++++++++
T Consensus 38 ~~~~~~~~~~pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~~-----~~--~~~l~~Gd~~~i~~~~~H~~~n~~~~~~~~l 110 (125)
T 3h8u_A 38 DSVVVVWHAHPGQEIASHVHPHGQDTWTVISGEAEYHQGN-----GI--VTHLKAGDIAIAKPGQVHGAMNSGPEPFIFV 110 (125)
T ss_dssp SCEEEEEEECTTCEECCC-CTTCEEEEEEEECEEEEECST-----TC--EEEEETTEEEEECTTCCCEEEECSSSCEEEE
T ss_pred CEEEEEEEECCCCcCCcccCCCCeEEEEEEEeEEEEEECC-----Ce--EEEeCCCCEEEECCCCEEEeEeCCCCCEEEE
Confidence 5788999999999999999997799999999999987522 33 4899999999999999999999999999999
Q ss_pred EEEeCCCCcee
Q 048097 174 AGFSSQFPGVI 184 (224)
Q Consensus 174 ~~~~s~~pg~~ 184 (224)
+++....++..
T Consensus 111 ~v~~p~~~~~~ 121 (125)
T 3h8u_A 111 SVVAPGNAGFA 121 (125)
T ss_dssp EEEESTTCCCC
T ss_pred EEECCCcccch
Confidence 98876665543
No 35
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=99.49 E-value=6.5e-14 Score=120.20 Aligned_cols=118 Identities=16% Similarity=0.069 Sum_probs=83.7
Q ss_pred CCCCCeeeecCCCCCCccCCCCeeEEEccccccCcccccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEE---
Q 048097 55 AKAEDFFLSGLDKPGNTENRLGFNVTNANVEQIPGLNTLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGF--- 131 (224)
Q Consensus 55 ~~~~df~f~~~~~~~~~~~~~g~~v~~~~~~~~p~L~~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~--- 131 (224)
-+.+||.+..+..+....++.|.....+. +...+.++++.+++++||+..++|+|++..|++||++|++++.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~PG~~~~~H~H~~~~E~~yVLeG~~~~~v~~~ 82 (239)
T 2xlg_A 7 HTFDDIPMPKLADPLLIYTPANEIFDIAS----CSAKDIGFAIAHAQIPPGGGPMPHIHYFINEWFWTPEGGIELFHSTK 82 (239)
T ss_dssp CBCSCCCCCCCSSCEEEECTTCCEEEEEE----EEETTEEEEEEEEEECTTCSCCSEEESSEEEEEEETTCCCEEEEEEE
T ss_pred cchhhCCCccccccceeecCCceEEEEec----cCCCCCCEEEEEEEECCCCcCCCeECCCccEEEEEEEeEEEEEEEec
Confidence 34566655554433322233333222221 12233468999999999999999999989999999999999987
Q ss_pred -----EeCC----CCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEE-EEEE
Q 048097 132 -----VTSN----QLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVA-FAGF 176 (224)
Q Consensus 132 -----v~~~----~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~-l~~~ 176 (224)
.+.. .+.++.+...+++||++++|+|.+|.+.|.+++++++ +..+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~l~~GD~i~iP~g~~H~~~N~~~~~~~~~l~~~ 137 (239)
T 2xlg_A 83 QYPNMDELPVVGGAGRGDLYSIQSEPKQLIYSPNHYMHGFVNPTDKTLPIVFVWM 137 (239)
T ss_dssp ECCCTTSCCSTTTTCCEEEEEEECCTTEEEEECTTEEEEEECCSSSCEEEEEEEE
T ss_pred ccccCCCcccccccccCceeEEEECCCCEEEECCCCCEEEEeCCCCCEEEEEEEE
Confidence 2220 0013456789999999999999999999999999888 6666
No 36
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=99.49 E-value=2.8e-13 Score=108.43 Aligned_cols=117 Identities=16% Similarity=0.124 Sum_probs=85.4
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCC-CCeeEEEEecCCCEEEEcCCCeeEEEeCC-CCcEE
Q 048097 94 GTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQL-NNTLIAKVLNKGDVFVFPIGLIHFQVNIG-KTSAV 171 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~-~~k~~~~~l~~GDv~v~P~G~~H~~~N~G-~~~a~ 171 (224)
++.+.++.++||+..++|+|+ ..|++||++|++++.+.+..+. .++.....|++||++++|+|..|...|.+ ++++.
T Consensus 40 ~~~~~~~~~~pg~~~~~H~H~-~~E~~~Vl~G~~~~~~~~~~~~~~~~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~ 118 (163)
T 1lr5_A 40 EVEVWLQTISPGQRTPIHRHS-CEEVFTVLKGKGTLLMGSSSLKYPGQPQEIPFFQNTTFSIPVNDPHQVWNSDEHEDLQ 118 (163)
T ss_dssp SEEEEEEEECTTCBCCEEEES-SCEEEEEEECCEEEEECCSSSSSCCSCEEEEECTTEEEEECTTCCEEEECCCSSSCEE
T ss_pred cEEEEEEEECCCCcCCCeECC-CCeEEEEEeCEEEEEECCccccccCccEEEEeCCCCEEEECCCCcEEeEeCCCCCCEE
Confidence 588999999999999999997 6899999999999987652100 01113689999999999999999999999 89999
Q ss_pred EEEEEeCCCCceeechhhhhcCCCCCCHHHHHhhcCCCHHHHHH
Q 048097 172 AFAGFSSQFPGVITIADTVFGANPPINPDFLGKAFQLDPKIVKD 215 (224)
Q Consensus 172 ~l~~~~s~~pg~~~~~~~lf~~~p~~p~~vLa~af~~~~~~v~~ 215 (224)
+++++............++ . ++....+...+.++++.+++
T Consensus 119 ~l~i~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~ 158 (163)
T 1lr5_A 119 VLVIISRPPAKIFLYDDWS-M---PHTAAVLKFPFVWDEDCFEA 158 (163)
T ss_dssp EEEEEESSSCCEEEESSTT-S---CGGGCEEESSCTTTHHHHHH
T ss_pred EEEEECCCCcccccccccc-c---CCcCccceeccccccccccc
Confidence 9988765443433333332 1 13334444455667766665
No 37
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=99.48 E-value=1.5e-13 Score=109.80 Aligned_cols=85 Identities=21% Similarity=0.158 Sum_probs=72.7
Q ss_pred ceEEEEEEEcCCC-cCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCC-CeeEEEeCCCCcEE
Q 048097 94 GTSAVRIDYAPYG-QNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIG-LIHFQVNIGKTSAV 171 (224)
Q Consensus 94 gis~~~v~l~pgg-~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G-~~H~~~N~G~~~a~ 171 (224)
++.+.++.++||+ ..++|||+...|++||++|++++.+. ++ .+.|++||++++|+| ..|.+.|.|+++++
T Consensus 45 ~~~~~~~~l~pg~~~~~~H~H~~~~E~~~Vl~G~~~~~~~------~~--~~~l~~Gd~i~i~~~~~~H~~~n~~~~~~~ 116 (162)
T 3l2h_A 45 HMGIHLIQIEPGKESTEYHLHHYEEEAVYVLSGKGTLTME------ND--QYPIAPGDFVGFPCHAAAHSISNDGTETLV 116 (162)
T ss_dssp SEEEEEEEECTTCBSSSSBEESSCCEEEEEEESCEEEEET------TE--EEEECTTCEEEECTTSCCEEEECCSSSCEE
T ss_pred eEEEEEEEECCCCcCCCCccCCCCCEEEEEEEEEEEEEEC------CE--EEEeCCCCEEEECCCCceEEeEeCCCCCEE
Confidence 6799999999999 59999997789999999999999863 33 489999999999997 99999999999999
Q ss_pred EEEEEeCCCCceeec
Q 048097 172 AFAGFSSQFPGVITI 186 (224)
Q Consensus 172 ~l~~~~s~~pg~~~~ 186 (224)
++++.....+....+
T Consensus 117 ~l~v~~p~~~~~~~~ 131 (162)
T 3l2h_A 117 CLVIGQRLDQDVVDY 131 (162)
T ss_dssp EEEEEECCSEEEEEE
T ss_pred EEEEECCCCCCeEec
Confidence 998876554443433
No 38
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=99.45 E-value=3.6e-13 Score=98.01 Aligned_cols=78 Identities=18% Similarity=0.131 Sum_probs=69.0
Q ss_pred ccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEE
Q 048097 92 TLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAV 171 (224)
Q Consensus 92 ~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~ 171 (224)
+.++.+.++.++||+..++|+|+...|++||++|++++.+. ++ ...+++||++++|+|..|...|.+++++.
T Consensus 25 ~~~~~~~~~~~~pg~~~~~H~H~~~~e~~~v~~G~~~~~~~------~~--~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~ 96 (105)
T 1v70_A 25 SERMLYDLYALLPGQAQKVHVHEGSDKVYYALEGEVVVRVG------EE--EALLAPGMAAFAPAGAPHGVRNESASPAL 96 (105)
T ss_dssp ETTEEEEEEEECTTCEEEEECCSSCEEEEEEEESCEEEEET------TE--EEEECTTCEEEECTTSCEEEECCSSSCEE
T ss_pred CCceEEEEEEECCCCcCCccCCCCCcEEEEEEeCEEEEEEC------CE--EEEeCCCCEEEECCCCcEEeEeCCCCCEE
Confidence 44688999999999999999998778999999999999763 33 48999999999999999999999999999
Q ss_pred EEEEEe
Q 048097 172 AFAGFS 177 (224)
Q Consensus 172 ~l~~~~ 177 (224)
++.++.
T Consensus 97 ~~~v~~ 102 (105)
T 1v70_A 97 LLVVTA 102 (105)
T ss_dssp EEEEEE
T ss_pred EEEEeC
Confidence 887765
No 39
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=99.45 E-value=2.7e-13 Score=99.66 Aligned_cols=78 Identities=18% Similarity=0.214 Sum_probs=67.3
Q ss_pred cceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEE
Q 048097 93 LGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVA 172 (224)
Q Consensus 93 lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~ 172 (224)
..+.+.+++++||+..++|.|+...|++||++|++++.+.+ +. ....|++||++++|+|..|...|.|++++++
T Consensus 16 ~~~~~~~~~~~Pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~~-----g~-~~~~l~~Gd~~~~p~~~~H~~~N~g~~~~~~ 89 (97)
T 2fqp_A 16 ERVKVTEWRFPPGGETGWHRHSMDYVVVPMTTGPLLLETPE-----GS-VTSQLTRGVSYTRPEGVEHNVINPSDTEFVF 89 (97)
T ss_dssp SSEEEEEEEECTTCBCCSEECCSCEEEEESSCEEEEEEETT-----EE-EEEEECTTCCEEECTTCEEEEECCSSSCEEE
T ss_pred CeEEEEEEEECCCCCCCCEECCCCcEEEEEeecEEEEEeCC-----CC-EEEEEcCCCEEEeCCCCcccCEeCCCCcEEE
Confidence 36889999999999999999997567999999999998642 21 1579999999999999999999999999988
Q ss_pred EEEE
Q 048097 173 FAGF 176 (224)
Q Consensus 173 l~~~ 176 (224)
+.+-
T Consensus 90 l~v~ 93 (97)
T 2fqp_A 90 VEIE 93 (97)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8653
No 40
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=99.44 E-value=1.9e-12 Score=102.26 Aligned_cols=85 Identities=15% Similarity=0.128 Sum_probs=71.7
Q ss_pred cceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEE
Q 048097 93 LGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVA 172 (224)
Q Consensus 93 lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~ 172 (224)
.++.+.++.++||+..++|+|+...|++||++|++++.+.+... ...++..|++||++++|+|..|.+.|.+++++.+
T Consensus 41 ~~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~~~~~--~~~~~~~l~~Gd~i~ip~g~~H~~~n~~~~~~~~ 118 (148)
T 2oa2_A 41 DHLQVTLMSIQVGEDIGLEIHPHLDQFLRVEEGRGLVQMGHRQD--NLHFQEEVFDDYAILIPAGTWHNVRNTGNRPLKL 118 (148)
T ss_dssp SSCEEEEEEECTTCBCCCBCCTTCEEEEEEEESEEEEEEESBTT--BCCEEEEEETTCEEEECTTCEEEEEECSSSCEEE
T ss_pred CceEEEEEEECCCCccCceECCCCcEEEEEEeCEEEEEECCccc--cceeeEEECCCCEEEECCCCcEEEEECCCCCEEE
Confidence 35788899999999999999997779999999999998864321 1123489999999999999999999999999988
Q ss_pred EEEEeCC
Q 048097 173 FAGFSSQ 179 (224)
Q Consensus 173 l~~~~s~ 179 (224)
++++...
T Consensus 119 l~i~~~~ 125 (148)
T 2oa2_A 119 YSIYAPP 125 (148)
T ss_dssp EEEEESC
T ss_pred EEEECCC
Confidence 8877543
No 41
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=99.42 E-value=3.3e-12 Score=103.45 Aligned_cols=117 Identities=14% Similarity=0.120 Sum_probs=85.1
Q ss_pred CCCCCCCeeeecCCCCCC---ccCCCCeeEEEccccccCcccccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEE
Q 048097 53 KLAKAEDFFLSGLDKPGN---TENRLGFNVTNANVEQIPGLNTLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYV 129 (224)
Q Consensus 53 ~~~~~~df~f~~~~~~~~---~~~~~g~~v~~~~~~~~p~L~~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v 129 (224)
.-+..+++.++......- -....|...+.+....- +....++.+.+++++||+..++|||+ ..|++||++|++++
T Consensus 12 ~iv~~~~~~W~~~~~~~~~~~~~~~~g~~~~~L~~~~~-g~~~~~~~~~~~~l~pG~~~~~H~H~-~~E~~~Vl~G~~~~ 89 (167)
T 3ibm_A 12 RVLRERDYRWEGTEEEAYKAEGTHFSGARRQTLVGRPA-GQEAPAFETRYFEVEPGGYTTLERHE-HTHVVMVVRGHAEV 89 (167)
T ss_dssp EEECEETTEETTCCCC---------CCEEEEEEECTTT-TCCSSSEEEEEEEECTTCBCCCBBCS-SCEEEEEEESEEEE
T ss_pred ceeecCCcccccceeeeccCCCCcCCCcEEEEEECCCC-CCCCCcEEEEEEEECCCCCCCCccCC-CcEEEEEEeCEEEE
Confidence 345566666665432111 01124554444433332 22334789999999999999999997 79999999999999
Q ss_pred EEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCC-CCcEEEEEEEeCC
Q 048097 130 GFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIG-KTSAVAFAGFSSQ 179 (224)
Q Consensus 130 ~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G-~~~a~~l~~~~s~ 179 (224)
.+. ++ .+.|++||+++||+|..|.+.|.+ ++++.+++++...
T Consensus 90 ~i~------~~--~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~~ 132 (167)
T 3ibm_A 90 VLD------DR--VEPLTPLDCVYIAPHAWHQIHATGANEPLGFLCIVDSD 132 (167)
T ss_dssp EET------TE--EEEECTTCEEEECTTCCEEEEEESSSCCEEEEEEEESS
T ss_pred EEC------CE--EEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEeCC
Confidence 863 33 589999999999999999999999 9999999887654
No 42
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=99.41 E-value=1.2e-12 Score=105.57 Aligned_cols=86 Identities=20% Similarity=0.131 Sum_probs=73.1
Q ss_pred cceEEEEEEEcCCCcC-CCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCC--CeeEEEeCCCCc
Q 048097 93 LGTSAVRIDYAPYGQN-PPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIG--LIHFQVNIGKTS 169 (224)
Q Consensus 93 lgis~~~v~l~pgg~~-ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G--~~H~~~N~G~~~ 169 (224)
..+.+.+++++||+.. ++|+|+...|++||++|++++.+. ++ .+.|++||+++||+| ..|.+.|.|+++
T Consensus 41 ~~~~~~~~~l~pG~~~~~~H~H~~~eE~~~Vl~G~~~~~~~------~~--~~~l~~GD~i~ip~~~~~~H~~~n~~~~~ 112 (163)
T 3i7d_A 41 SQFGVNLVRLEPGAKSSLRHYHMEQDEFVMVTEGALVLVDD------QG--EHPMVPGDCAAFPAGDPNGHQFVNRTDAP 112 (163)
T ss_dssp CSEEEEEEEECTTCBSSSSEEESSCCEEEEEEESCEEEEET------TE--EEEECTTCEEEECTTCCCCBEEECCSSSC
T ss_pred CeEEEEEEEECCCCcCCCCccCCCCcEEEEEEECEEEEEEC------CE--EEEeCCCCEEEECCCCCcceEEEECCCCC
Confidence 3689999999999965 899999768999999999999863 33 589999999999999 999999999999
Q ss_pred EEEEEEEeCCCCceeec
Q 048097 170 AVAFAGFSSQFPGVITI 186 (224)
Q Consensus 170 a~~l~~~~s~~pg~~~~ 186 (224)
++++.+...........
T Consensus 113 ~~~l~v~~p~~~d~~~y 129 (163)
T 3i7d_A 113 ATFLVVGTRTPTETAYY 129 (163)
T ss_dssp EEEEEEEECCSCEEEEE
T ss_pred EEEEEEECCCCCCcccC
Confidence 99998887555444433
No 43
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=99.41 E-value=3.1e-12 Score=105.65 Aligned_cols=83 Identities=20% Similarity=0.184 Sum_probs=73.0
Q ss_pred ceEEEEEEEcCCCc------CCCccCC--CCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeC
Q 048097 94 GTSAVRIDYAPYGQ------NPPHTHP--RATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNI 165 (224)
Q Consensus 94 gis~~~v~l~pgg~------~ppH~Hp--~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~ 165 (224)
++.+.++.++||+. .++|+|+ +..|++||++|++.+.+.+.. ++.+...+++||++++|+|..|...|.
T Consensus 66 ~l~~~~~~l~PG~~~~E~~~~~~H~H~~~~~~E~~~Vl~G~~~~~i~~~~---g~~~~~~l~~GD~v~ip~g~~H~~~N~ 142 (190)
T 1x82_A 66 DLNFATTVLYPGKVGKEFFFTKGHFHAKLDRAEVYVALKGKGGMLLQTPE---GDAKWISMEPGTVVYVPPYWAHRTVNI 142 (190)
T ss_dssp CEEEEEEEECCCEETTEECBCCCBBCSSTTCCEEEEEEESCEEEEEECTT---CCEEEEEECTTCEEEECTTCEEEEEEC
T ss_pred CeEEEEEEECCCcCCCcccCCCCeECCCCCCCEEEEEEcCEEEEEEcCcC---CcEEEEEECCCcEEEECCCCeEEEEEC
Confidence 67888889999998 8899998 357999999999999987654 456678999999999999999999999
Q ss_pred CCCcEEEEEEEeCC
Q 048097 166 GKTSAVAFAGFSSQ 179 (224)
Q Consensus 166 G~~~a~~l~~~~s~ 179 (224)
|++++++++++...
T Consensus 143 g~~~~~~l~v~~~~ 156 (190)
T 1x82_A 143 GDEPFIFLAIYPAD 156 (190)
T ss_dssp SSSCEEEEEEEETT
T ss_pred CcccEEEEEEECCC
Confidence 99999998887643
No 44
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=99.39 E-value=1.6e-12 Score=106.37 Aligned_cols=80 Identities=16% Similarity=0.200 Sum_probs=71.5
Q ss_pred cceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEE
Q 048097 93 LGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVA 172 (224)
Q Consensus 93 lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~ 172 (224)
.|..+.+++++||+..++|.|+ ..|++||++|++++.+.+. + ++.|++||++ ||+|..|.+.|.|++++++
T Consensus 77 ~G~~~~~v~l~PG~~~~~H~H~-~eE~~~VLeGel~l~ld~g-----e--~~~L~~GDsi-~~~g~~H~~~N~g~~~ar~ 147 (172)
T 3es1_A 77 GGSVIRVVDMLPGKESPMHRTN-SIDYGIVLEGEIELELDDG-----A--KRTVRQGGII-VQRGTNHLWRNTTDKPCRI 147 (172)
T ss_dssp CSEEEEEEEECTTCBCCCBCCS-EEEEEEEEESCEEEECGGG-----C--EEEECTTCEE-EECSCCBEEECCSSSCEEE
T ss_pred CCeEEEEEEECCCCCCCCeecC-ceEEEEEEeCEEEEEECCC-----e--EEEECCCCEE-EeCCCcEEEEeCCCCCEEE
Confidence 3889999999999999999997 6899999999999986421 2 4799999999 9999999999999999999
Q ss_pred EEEEeCCCC
Q 048097 173 FAGFSSQFP 181 (224)
Q Consensus 173 l~~~~s~~p 181 (224)
++++....|
T Consensus 148 l~V~~P~~p 156 (172)
T 3es1_A 148 AFILIEAPA 156 (172)
T ss_dssp EEEEEECCC
T ss_pred EEEEcCCCc
Confidence 999887766
No 45
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=99.39 E-value=2.1e-12 Score=95.67 Aligned_cols=78 Identities=19% Similarity=0.181 Sum_probs=68.9
Q ss_pred cceEEEEEEEcCCCcCCCc--cCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcE
Q 048097 93 LGTSAVRIDYAPYGQNPPH--THPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSA 170 (224)
Q Consensus 93 lgis~~~v~l~pgg~~ppH--~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a 170 (224)
.++.+.++.++||+..++| +|++..|++||++|++++.+. ++ ...|++||++++|+|..|...|.+++++
T Consensus 19 ~~~~~~~~~~~pg~~~~~h~~~H~~~~e~~~vl~G~~~~~~~------~~--~~~l~~Gd~~~i~~~~~H~~~~~~~~~~ 90 (113)
T 2gu9_A 19 RQVQAAEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAIVD------GH--TQALQAGSLIAIERGQAHEIRNTGDTPL 90 (113)
T ss_dssp TTEEEEEEEECTTCEEECCCSSSCCCEEEEEEEECCEEEEET------TE--EEEECTTEEEEECTTCCEEEECCSSSCE
T ss_pred CcEEEEEEEECCCCccCCcccccCCCcEEEEEEeCEEEEEEC------CE--EEEeCCCCEEEECCCCcEEeEcCCCCCE
Confidence 4678999999999998888 998679999999999999863 33 4899999999999999999999999999
Q ss_pred EEEEEEeC
Q 048097 171 VAFAGFSS 178 (224)
Q Consensus 171 ~~l~~~~s 178 (224)
.++.++..
T Consensus 91 ~~~~v~~~ 98 (113)
T 2gu9_A 91 KTVNFYHP 98 (113)
T ss_dssp EEEEEEES
T ss_pred EEEEEECC
Confidence 88887654
No 46
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=99.37 E-value=1.9e-12 Score=100.45 Aligned_cols=84 Identities=20% Similarity=0.249 Sum_probs=71.3
Q ss_pred cceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEE
Q 048097 93 LGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVA 172 (224)
Q Consensus 93 lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~ 172 (224)
.++.+.++.++||+..++|+|+ ..|++||++|++++.+... ++ ...+++||++++|+|..|...|.+++++.+
T Consensus 37 ~~~~~~~~~~~pg~~~~~H~H~-~~e~~~vl~G~~~~~~~~~----~~--~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~ 109 (145)
T 3ht1_A 37 DRFVLTEFEVSPNGSTPPHFHE-WEHEIYVLEGSMGLVLPDQ----GR--TEEVGPGEAIFIPRGEPHGFVTGPGQTCRF 109 (145)
T ss_dssp CSEEEEEEEEEEEEECCCEECS-SCEEEEEEEECEEEEEGGG----TE--EEEECTTCEEEECTTCCBEEECCTTCCEEE
T ss_pred CcEEEEEEEECCCCcCCCccCC-CceEEEEEEeEEEEEEeEC----CE--EEEECCCCEEEECCCCeEEeEcCCCCCEEE
Confidence 3688999999999999999998 5788899999999873111 33 589999999999999999999999999999
Q ss_pred EEEEeCCCCce
Q 048097 173 FAGFSSQFPGV 183 (224)
Q Consensus 173 l~~~~s~~pg~ 183 (224)
+.++....+..
T Consensus 110 l~i~~~~~~~~ 120 (145)
T 3ht1_A 110 LVVAPCERPPV 120 (145)
T ss_dssp EEEEESCCCCC
T ss_pred EEEECCCCCCe
Confidence 98887665554
No 47
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=99.37 E-value=4.1e-13 Score=99.80 Aligned_cols=79 Identities=15% Similarity=0.101 Sum_probs=67.2
Q ss_pred ccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEE
Q 048097 92 TLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAV 171 (224)
Q Consensus 92 ~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~ 171 (224)
.-.+.+.|++++||+..++|+|+...|+++|++|++++...+ ++.....+++||.+++|+|..|...|.|++|++
T Consensus 14 n~~~rV~r~~i~PG~~~~~H~H~~~~e~~~v~~G~~~v~~~d-----~~~~~~~l~~G~~~~ip~G~~H~~~N~g~~pl~ 88 (98)
T 3lag_A 14 NDEVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVAPD-----GTRSLAQLKTGRSYARKAGVQHDVRNESTAEIV 88 (98)
T ss_dssp SSSEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEECTT-----SCEECCCBCTTCCEEECTTCEEEEBCCSSSCEE
T ss_pred CCeEEEEEEEECCCCccCcEECCCcEEEEEEeccEEEEEeCC-----CceEEEEecCCcEEEEcCCCcEECEECCCCeEE
Confidence 345889999999999999999998889999999999886532 232246789999999999999999999999999
Q ss_pred EEEE
Q 048097 172 AFAG 175 (224)
Q Consensus 172 ~l~~ 175 (224)
++.+
T Consensus 89 ~IeV 92 (98)
T 3lag_A 89 FLEI 92 (98)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9876
No 48
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=99.34 E-value=3.2e-12 Score=97.29 Aligned_cols=78 Identities=24% Similarity=0.351 Sum_probs=68.3
Q ss_pred ccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEE
Q 048097 92 TLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAV 171 (224)
Q Consensus 92 ~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~ 171 (224)
+.++.+.++.++||+..++|+|+ ..|++||++|++++.+. ++ ...|++||++++|+|..|...|.++ ++.
T Consensus 38 ~~~~~~~~~~~~pg~~~~~H~H~-~~e~~~vl~G~~~~~~~------~~--~~~l~~Gd~~~ip~~~~H~~~~~~~-~~~ 107 (126)
T 4e2g_A 38 GKNLMLNWVRIEPNTEMPAHEHP-HEQAGVMLEGTLELTIG------EE--TRVLRPGMAYTIPGGVRHRARTFED-GCL 107 (126)
T ss_dssp CSSCEEEEEEECTTCEEEEECCS-SEEEEEEEEECEEEEET------TE--EEEECTTEEEEECTTCCEEEECCTT-CEE
T ss_pred CCCeEEEEEEECCCCcCCCccCC-CceEEEEEEeEEEEEEC------CE--EEEeCCCCEEEECCCCcEEeEECCC-CEE
Confidence 34689999999999999999998 49999999999999863 33 4899999999999999999999987 788
Q ss_pred EEEEEeCC
Q 048097 172 AFAGFSSQ 179 (224)
Q Consensus 172 ~l~~~~s~ 179 (224)
++.++...
T Consensus 108 ~l~v~~p~ 115 (126)
T 4e2g_A 108 VLDIFSPP 115 (126)
T ss_dssp EEEEEESC
T ss_pred EEEEECCC
Confidence 88887643
No 49
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=99.34 E-value=8.8e-12 Score=93.91 Aligned_cols=74 Identities=15% Similarity=0.173 Sum_probs=65.0
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEE-EecCCCEEEEcCCCeeEEEeCCCCcEEE
Q 048097 94 GTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAK-VLNKGDVFVFPIGLIHFQVNIGKTSAVA 172 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~-~l~~GDv~v~P~G~~H~~~N~G~~~a~~ 172 (224)
++.+.++.+.||+..++|+|+ ..|++||++|++++.+.+ + .. .|++||++++|+|..|...|.+++++.+
T Consensus 26 ~~~~~~~~~~pg~~~~~H~H~-~~e~~~Vl~G~~~~~i~~------~--~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~ 96 (117)
T 2b8m_A 26 HVQINHIVLPRGEQMPKHYSN-SYVHLIIIKGEMTLTLED------Q--EPHNYKEGNIVYVPFNVKMLIQNINSDILEF 96 (117)
T ss_dssp SCEEEEEEEETTCBCCCEECS-SCEEEEEEESEEEEEETT------S--CCEEEETTCEEEECTTCEEEEECCSSSEEEE
T ss_pred ceEEEEEEECCCCcCCCEeCC-CcEEEEEEeCEEEEEECC------E--EEEEeCCCCEEEECCCCcEEeEcCCCCCEEE
Confidence 568888999999999999996 689999999999998642 2 25 8999999999999999999999998888
Q ss_pred EEEE
Q 048097 173 FAGF 176 (224)
Q Consensus 173 l~~~ 176 (224)
+.+.
T Consensus 97 l~i~ 100 (117)
T 2b8m_A 97 FVVK 100 (117)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8663
No 50
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=99.33 E-value=5.3e-12 Score=101.44 Aligned_cols=79 Identities=11% Similarity=0.008 Sum_probs=70.5
Q ss_pred cceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEE
Q 048097 93 LGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVA 172 (224)
Q Consensus 93 lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~ 172 (224)
.++.+.++.++||+..++|+|+ ..|++||++|++++.+. ++ ...|++||++++|+|..|...|.|++++.+
T Consensus 42 ~~~~~~~~~l~pG~~~~~H~H~-~~E~~~Vl~G~~~v~v~------g~--~~~l~~Gd~i~ip~~~~H~~~n~g~~~~~~ 112 (156)
T 3kgz_A 42 LACEWRYFEVDEGGYSTLERHA-HVHAVMIHRGHGQCLVG------ET--ISDVAQGDLVFIPPMTWHQFRANRGDCLGF 112 (156)
T ss_dssp CSEEEEEEEEEEEEECCCBBCS-SCEEEEEEEEEEEEEET------TE--EEEEETTCEEEECTTCCEEEECCSSSCEEE
T ss_pred CcEEEEEEEECCCCccCceeCC-CcEEEEEEeCEEEEEEC------CE--EEEeCCCCEEEECCCCcEEeEeCCCCCEEE
Confidence 4788999999999999999998 58999999999999863 33 589999999999999999999999999999
Q ss_pred EEEEeCCC
Q 048097 173 FAGFSSQF 180 (224)
Q Consensus 173 l~~~~s~~ 180 (224)
+++++...
T Consensus 113 l~i~~~~~ 120 (156)
T 3kgz_A 113 LCVVNAAR 120 (156)
T ss_dssp EEEEESSC
T ss_pred EEEEeCCC
Confidence 98887543
No 51
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.33 E-value=4.4e-12 Score=98.45 Aligned_cols=77 Identities=22% Similarity=0.147 Sum_probs=67.5
Q ss_pred ccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEE
Q 048097 92 TLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAV 171 (224)
Q Consensus 92 ~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~ 171 (224)
+..+.+.++.++||+..++|+|++..|++||++|++++.+. ++ ...|++||++++|+|..|.+.|.++++++
T Consensus 54 ~~~~~~~~~~~~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~------~~--~~~l~~Gd~i~i~~~~~H~~~n~~~~~~~ 125 (133)
T 1o4t_A 54 NKARLFARMKLPPGSSVGLHKHEGEFEIYYILLGEGVFHDN------GK--DVPIKAGDVCFTDSGESHSIENTGNTDLE 125 (133)
T ss_dssp TSEEEEEEEEECTTCEEEEEECCSEEEEEEEEESEEEEEET------TE--EEEEETTEEEEECTTCEEEEECCSSSCEE
T ss_pred CceEEEEEEEECCCCccCceECCCccEEEEEEeCEEEEEEC------CE--EEEeCCCcEEEECCCCcEEeEECCCCCEE
Confidence 34568889999999999999998668999999999999863 33 58999999999999999999999999998
Q ss_pred EEEEE
Q 048097 172 AFAGF 176 (224)
Q Consensus 172 ~l~~~ 176 (224)
++++.
T Consensus 126 ~l~v~ 130 (133)
T 1o4t_A 126 FLAVI 130 (133)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88764
No 52
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=99.32 E-value=3.4e-12 Score=96.77 Aligned_cols=74 Identities=20% Similarity=0.243 Sum_probs=63.2
Q ss_pred ccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEE
Q 048097 92 TLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAV 171 (224)
Q Consensus 92 ~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~ 171 (224)
+.++.+.++.++||+..++|+|+. .|++||++|++++.+. ++ ++.|++||++++|+|..|...|.++....
T Consensus 33 ~~~~~v~~~~l~~G~~~~~H~H~~-~e~~~Vl~G~~~~~i~------~~--~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~ 103 (114)
T 3fjs_A 33 EHRLEVMRMVLPAGKQVGSHSVAG-PSTIQCLEGEVEIGVD------GA--QRRLHQGDLLYLGAGAAHDVNAITNTSLL 103 (114)
T ss_dssp ETTEEEEEEEECTTCEEEEECCSS-CEEEEEEESCEEEEET------TE--EEEECTTEEEEECTTCCEEEEESSSEEEE
T ss_pred CCCEEEEEEEECCCCccCceeCCC-cEEEEEEECEEEEEEC------CE--EEEECCCCEEEECCCCcEEEEeCCCcEEE
Confidence 447899999999999999999984 7999999999999863 33 58999999999999999999998765544
Q ss_pred EEE
Q 048097 172 AFA 174 (224)
Q Consensus 172 ~l~ 174 (224)
++.
T Consensus 104 ~~~ 106 (114)
T 3fjs_A 104 VTV 106 (114)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 53
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=99.31 E-value=1.1e-11 Score=101.49 Aligned_cols=82 Identities=18% Similarity=0.157 Sum_probs=68.5
Q ss_pred ccccceEEEEEEEcCCCcCC---CccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeC-
Q 048097 90 LNTLGTSAVRIDYAPYGQNP---PHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNI- 165 (224)
Q Consensus 90 L~~lgis~~~v~l~pgg~~p---pH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~- 165 (224)
..+..+.+.+++++||+..+ +|+|+. .|++||++|++++.+.+. +....+.|++||.++||++.+|.+.|.
T Consensus 112 ~~~~~~~~~~~~~~pg~~~~~~~~h~h~~-~E~~~Vl~G~~~~~~~~~----~~~~~~~l~~GD~~~~~~~~~H~~~n~~ 186 (198)
T 2bnm_A 112 KRAPSLVPLVVDVLTDNPDDAKFNSGHAG-NEFLFVLEGEIHMKWGDK----ENPKEALLPTGASMFVEEHVPHAFTAAK 186 (198)
T ss_dssp TTSTTCEEEEEEECCCCGGGCCCCCCCSS-CEEEEEEESCEEEEESCT----TSCEEEEECTTCEEEECTTCCEEEEEST
T ss_pred CCCCcceEEEEEEcCCCCCcccccccCCC-eEEEEEEeeeEEEEECCc----CCcccEEECCCCEEEeCCCCceEEEecC
Confidence 34457899999999999876 799985 899999999999987431 111258999999999999999999999
Q ss_pred CCCcEEEEEEE
Q 048097 166 GKTSAVAFAGF 176 (224)
Q Consensus 166 G~~~a~~l~~~ 176 (224)
|++++++++++
T Consensus 187 ~~~~~~~l~v~ 197 (198)
T 2bnm_A 187 GTGSAKLIAVN 197 (198)
T ss_dssp TSCCEEEEEEE
T ss_pred CCCCeEEEEEe
Confidence 99999988765
No 54
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=99.31 E-value=1.1e-11 Score=100.64 Aligned_cols=78 Identities=12% Similarity=0.052 Sum_probs=69.7
Q ss_pred cceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEE
Q 048097 93 LGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVA 172 (224)
Q Consensus 93 lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~ 172 (224)
.++.+.+++++||+..++|+|+ ..|++||++|++++.+. ++ ...+++||++++|+|..|...|.+++++.+
T Consensus 51 ~~~~~~~~~l~pG~~~~~H~H~-~~E~~~Vl~G~~~~~v~------g~--~~~l~~GD~i~ip~g~~H~~~n~~~~~~~~ 121 (166)
T 3jzv_A 51 LTGELRYFEVGPGGHSTLERHQ-HAHGVMILKGRGHAMVG------RA--VSAVAPYDLVTIPGWSWHQFRAPADEALGF 121 (166)
T ss_dssp CSEEEEEEEEEEEEECCCBBCS-SCEEEEEEEECEEEEET------TE--EEEECTTCEEEECTTCCEEEECCTTSCEEE
T ss_pred CeEEEEEEEECCCCccCceeCC-CcEEEEEEeCEEEEEEC------CE--EEEeCCCCEEEECCCCcEEeEeCCCCCEEE
Confidence 5788999999999999999998 58999999999999763 34 589999999999999999999999999999
Q ss_pred EEEEeCC
Q 048097 173 FAGFSSQ 179 (224)
Q Consensus 173 l~~~~s~ 179 (224)
++++...
T Consensus 122 l~i~~~~ 128 (166)
T 3jzv_A 122 LCMVNAE 128 (166)
T ss_dssp EEEEESS
T ss_pred EEEEccC
Confidence 9888653
No 55
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=99.29 E-value=9.8e-12 Score=94.81 Aligned_cols=80 Identities=14% Similarity=0.076 Sum_probs=66.2
Q ss_pred ccceEEEEEEEcCCCcCC-CccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcE
Q 048097 92 TLGTSAVRIDYAPYGQNP-PHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSA 170 (224)
Q Consensus 92 ~lgis~~~v~l~pgg~~p-pH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a 170 (224)
..++.+.++.++||+..+ +|+|+...+++||++|++++.+. ++ ...+++||++++|+|.+|...|.+++++
T Consensus 23 ~~~~~~~~~~~~pg~~~~~~H~H~~~e~~~~vl~G~~~~~i~------~~--~~~l~~Gd~i~i~~~~~H~~~~~~~~~~ 94 (125)
T 3cew_A 23 LTGAEVSINHLPAGAGVPFVHSHKQNEEIYGILSGKGFITID------GE--KIELQAGDWLRIAPDGKRQISAASDSPI 94 (125)
T ss_dssp CSSCEEEEEEECTTCBCSSEEEESSEEEEEEEEEEEEEEEET------TE--EEEEETTEEEEECTTCCEEEEEBTTBCE
T ss_pred CCCcEEEEEEECCCCCCCCCccCCCceEEEEEEeCEEEEEEC------CE--EEEeCCCCEEEECCCCcEEEEcCCCCCE
Confidence 457788889999999888 89998544455599999999863 33 4899999999999999999999999888
Q ss_pred EEEEEEeCC
Q 048097 171 VAFAGFSSQ 179 (224)
Q Consensus 171 ~~l~~~~s~ 179 (224)
.++++....
T Consensus 95 ~~~~i~~~~ 103 (125)
T 3cew_A 95 GFLCIQVKA 103 (125)
T ss_dssp EEEEEEEET
T ss_pred EEEEEEcCC
Confidence 887765433
No 56
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=99.28 E-value=1.4e-11 Score=92.34 Aligned_cols=76 Identities=26% Similarity=0.301 Sum_probs=65.7
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEE
Q 048097 94 GTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAF 173 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l 173 (224)
++.+.++.++||...++|+|+ ..|++||++|++++.+. ++ ...+++||++++|+|..|...|.+ ++.++
T Consensus 33 ~~~~~~~~~~pg~~~~~H~H~-~~e~~~vl~G~~~~~~~------~~--~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~l 101 (116)
T 2pfw_A 33 ELMAVKIWFDKGAEGYVHAHR-HSQVSYVVEGEFHVNVD------GV--IKVLTAGDSFFVPPHVDHGAVCPT--GGILI 101 (116)
T ss_dssp TEEEEEEEECTTEEEEEECCS-SEEEEEEEEECEEEEET------TE--EEEECTTCEEEECTTCCEEEEESS--CEEEE
T ss_pred ceEEEEEEECCCCcCCcEECC-cceEEEEEeeEEEEEEC------CE--EEEeCCCCEEEECcCCceeeEeCC--CcEEE
Confidence 478999999999999999998 79999999999999862 33 589999999999999999999987 67777
Q ss_pred EEEeCCC
Q 048097 174 AGFSSQF 180 (224)
Q Consensus 174 ~~~~s~~ 180 (224)
.++....
T Consensus 102 ~v~~p~~ 108 (116)
T 2pfw_A 102 DTFSPAR 108 (116)
T ss_dssp EEEESCC
T ss_pred EEECCch
Confidence 7775443
No 57
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.28 E-value=3.2e-11 Score=95.35 Aligned_cols=78 Identities=22% Similarity=0.355 Sum_probs=68.7
Q ss_pred ccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEE-EEecCCCEEEEcCCCeeEEEeCCCCcE
Q 048097 92 TLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIA-KVLNKGDVFVFPIGLIHFQVNIGKTSA 170 (224)
Q Consensus 92 ~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~-~~l~~GDv~v~P~G~~H~~~N~G~~~a 170 (224)
..++.+.++.++||+..++|+|+. .|++||++|++++.+.+ + . ..+++||++++|+|..|+..|.+++++
T Consensus 45 ~~~~~~~~~~~~pg~~~~~H~H~~-~E~~~Vl~G~~~~~~~~------~--~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~ 115 (147)
T 2f4p_A 45 VFNTQVYDVVFEPGARTHWHSHPG-GQILIVTRGKGFYQERG------K--PARILKKGDVVEIPPNVVHWHGAAPDEEL 115 (147)
T ss_dssp SSSCEEEEEEECTTCEECSEECTT-CEEEEEEEEEEEEEETT------S--CCEEEETTCEEEECTTCCEEEEEBTTBCE
T ss_pred CCcEEEEEEEECCCCccCceECCC-ceEEEEEeCEEEEEECC------E--EEEEECCCCEEEECCCCcEEeEeCCCCCE
Confidence 347899999999999999999985 89999999999998632 2 3 689999999999999999999999999
Q ss_pred EEEEEEeC
Q 048097 171 VAFAGFSS 178 (224)
Q Consensus 171 ~~l~~~~s 178 (224)
.+++++..
T Consensus 116 ~~l~v~~~ 123 (147)
T 2f4p_A 116 VHIGISTQ 123 (147)
T ss_dssp EEEEEECC
T ss_pred EEEEEEcc
Confidence 88877654
No 58
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=99.27 E-value=1e-11 Score=95.32 Aligned_cols=77 Identities=18% Similarity=0.097 Sum_probs=68.0
Q ss_pred ccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEE
Q 048097 92 TLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAV 171 (224)
Q Consensus 92 ~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~ 171 (224)
..++.+.+++++||+..++|+|+ ..|++||++|++++.+. ++ ...+++||++++|+|..|...|.+++++.
T Consensus 45 ~~~~~~~~~~~~pg~~~~~H~H~-~~e~~~Vl~G~~~~~i~------~~--~~~l~~Gd~i~ip~g~~H~~~~~~~~~~~ 115 (126)
T 1vj2_A 45 APNFVMRLFTVEPGGLIDRHSHP-WEHEIFVLKGKLTVLKE------QG--EETVEEGFYIFVEPNEIHGFRNDTDSEVE 115 (126)
T ss_dssp CSSEEEEEEEEEEEEEEEEECCS-SCEEEEEEESEEEEECS------SC--EEEEETTEEEEECTTCCEEEECCSSSCEE
T ss_pred CCCEEEEEEEECCCCcCCceeCC-CcEEEEEEEeEEEEEEC------CE--EEEECCCCEEEECCCCcEEeEeCCCCCEE
Confidence 44789999999999999999998 68999999999998763 23 48999999999999999999999999998
Q ss_pred EEEEEe
Q 048097 172 AFAGFS 177 (224)
Q Consensus 172 ~l~~~~ 177 (224)
+++++.
T Consensus 116 ~l~v~~ 121 (126)
T 1vj2_A 116 FLCLIP 121 (126)
T ss_dssp EEEEEE
T ss_pred EEEEEc
Confidence 887664
No 59
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=99.26 E-value=1.9e-11 Score=94.13 Aligned_cols=78 Identities=18% Similarity=0.150 Sum_probs=59.2
Q ss_pred eEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEEE
Q 048097 95 TSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAFA 174 (224)
Q Consensus 95 is~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l~ 174 (224)
+.+.++.++||+..++|+|+...|++||++|++++.+.+ ++ ...|++||++++|+|..|...|.+++ +.++.
T Consensus 43 ~~~~~~~~~~g~~~~~H~H~~~~E~~~vl~G~~~~~~~~-----~~--~~~l~~Gd~~~ip~g~~H~~~~~~~~-~~~l~ 114 (134)
T 2o8q_A 43 AHVIRAIPGKEAKPTWHTHTVGFQLFYVLRGWVEFEYED-----IG--AVMLEAGGSAFQPPGVRHRELRHSDD-LEVLE 114 (134)
T ss_dssp EEEEEECC-----CCCEEECCSCEEEEEEESEEEEEETT-----TE--EEEEETTCEEECCTTCCEEEEEECTT-CEEEE
T ss_pred EEEEEEecCCCCCCCCEECCCCcEEEEEEeCEEEEEECC-----cE--EEEecCCCEEEECCCCcEEeEeCCCC-eEEEE
Confidence 356666677899999999987799999999999998642 13 58999999999999999999998774 57776
Q ss_pred EEeCCC
Q 048097 175 GFSSQF 180 (224)
Q Consensus 175 ~~~s~~ 180 (224)
++....
T Consensus 115 ~~~p~~ 120 (134)
T 2o8q_A 115 IVSPAG 120 (134)
T ss_dssp EESSTT
T ss_pred EECCCc
Confidence 665443
No 60
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=99.26 E-value=5.6e-12 Score=93.87 Aligned_cols=78 Identities=15% Similarity=0.120 Sum_probs=63.7
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEE
Q 048097 94 GTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAF 173 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l 173 (224)
.+.+.+++++||+..+.|.|+...+++++++|++++.. .+ ++.....+++||++++|+|..|+..|.|+++++++
T Consensus 16 ~v~v~~~~l~PG~~~~~H~H~~~~~iv~v~~G~~~~~~--~d---G~~~~~~l~aGd~~~~p~G~~H~~~N~g~~~l~fi 90 (98)
T 2ozi_A 16 EVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVA--PD---GTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFL 90 (98)
T ss_dssp SEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEEC--TT---SCEECCCBCTTCCEEECTTCEEEEEECSSSCEEEE
T ss_pred cEEEEEEEECCCCccCcEeCCCCEEEEEEeeEEEEEEe--CC---CcEEEEEECCCCEEEECCCCceeCEECCCCCEEEE
Confidence 68999999999999999999865566667788887754 22 32123689999999999999999999999999998
Q ss_pred EEE
Q 048097 174 AGF 176 (224)
Q Consensus 174 ~~~ 176 (224)
.+-
T Consensus 91 ~vE 93 (98)
T 2ozi_A 91 EIE 93 (98)
T ss_dssp EEE
T ss_pred EEE
Confidence 763
No 61
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=99.26 E-value=3.7e-11 Score=91.56 Aligned_cols=75 Identities=16% Similarity=0.270 Sum_probs=66.3
Q ss_pred cceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEE
Q 048097 93 LGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVA 172 (224)
Q Consensus 93 lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~ 172 (224)
..+.+.+++++||...++|||. ..|++||++|++++.+. ++ ...+++||++++|+|..|...|.+++++.+
T Consensus 32 ~~~~~~~~~~~pg~~~~~H~H~-~~Ei~~v~~G~~~~~i~------~~--~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~ 102 (128)
T 4i4a_A 32 TPFGGAWCIVRPETKSFRHSHN-EYELFIVIQGNAIIRIN------DE--DFPVTKGDLIIIPLDSEHHVINNNQEDFHF 102 (128)
T ss_dssp CSSEEEEEEECTTEECCCBCCS-SEEEEEEEESEEEEEET------TE--EEEEETTCEEEECTTCCEEEEECSSSCEEE
T ss_pred CCcEEEEEEECCCCccCCEecC-CeEEEEEEeCEEEEEEC------CE--EEEECCCcEEEECCCCcEEeEeCCCCCEEE
Confidence 3588899999999999999995 79999999999999863 34 589999999999999999999999998887
Q ss_pred EEEE
Q 048097 173 FAGF 176 (224)
Q Consensus 173 l~~~ 176 (224)
+++.
T Consensus 103 ~~i~ 106 (128)
T 4i4a_A 103 YTIW 106 (128)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7654
No 62
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=99.24 E-value=2.3e-11 Score=99.00 Aligned_cols=75 Identities=19% Similarity=0.094 Sum_probs=65.6
Q ss_pred ceEEEEEEEcC-CCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEE
Q 048097 94 GTSAVRIDYAP-YGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVA 172 (224)
Q Consensus 94 gis~~~v~l~p-gg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~ 172 (224)
-+...+++++| |+...+|.|.++.|++||++|++++.+. ++ ++.|++||.++||+|..|.+.|.+++++++
T Consensus 87 ~~~~~~v~lpP~G~~~~~~~~h~gEE~~yVLeG~v~vtl~------g~--~~~L~~Gds~~iP~g~~H~~~N~~d~~Arl 158 (166)
T 2vpv_A 87 YFASGILKLPAISGQKKLSNSFRTYITFHVIQGIVEVTVC------KN--KFLSVKGSTFQIPAFNEYAIANRGNDEAKM 158 (166)
T ss_dssp SCEEEEEEECSSGGGCEEEECCSEEEEEEEEESEEEEEET------TE--EEEEETTCEEEECTTCEEEEEECSSSCEEE
T ss_pred cceeEEEEECCCCCCCCCccCCCceEEEEEEEeEEEEEEC------CE--EEEEcCCCEEEECCCCCEEEEECCCCCEEE
Confidence 36778899999 7777777677799999999999999874 33 589999999999999999999999999999
Q ss_pred EEEE
Q 048097 173 FAGF 176 (224)
Q Consensus 173 l~~~ 176 (224)
+.+.
T Consensus 159 l~Vq 162 (166)
T 2vpv_A 159 FFVQ 162 (166)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8764
No 63
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=99.23 E-value=4.7e-11 Score=89.19 Aligned_cols=73 Identities=12% Similarity=0.182 Sum_probs=62.4
Q ss_pred cceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEE
Q 048097 93 LGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVA 172 (224)
Q Consensus 93 lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~ 172 (224)
.++.+.++.++||+..++|+|+ ..|++||++|++++.+. ++ ...+++||++++|+|..|...|.+ ++.+
T Consensus 38 ~~~~~~~~~~~~g~~~~~H~H~-~~e~~~vl~G~~~~~~~------~~--~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~ 106 (115)
T 1yhf_A 38 QDLGITVFSLDKGQEIGRHSSP-GDAMVTILSGLAEITID------QE--TYRVAEGQTIVMPAGIPHALYAVE--AFQM 106 (115)
T ss_dssp TTEEEEEEEECTTCEEEEECCS-SEEEEEEEESEEEEEET------TE--EEEEETTCEEEECTTSCEEEEESS--CEEE
T ss_pred CceEEEEEEECCCCccCCEECC-CcEEEEEEeCEEEEEEC------CE--EEEECCCCEEEECCCCCEEEEECC--CceE
Confidence 3678899999999999999998 68999999999999763 33 479999999999999999999987 4555
Q ss_pred EEEE
Q 048097 173 FAGF 176 (224)
Q Consensus 173 l~~~ 176 (224)
++++
T Consensus 107 ~~v~ 110 (115)
T 1yhf_A 107 LLVV 110 (115)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5554
No 64
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=99.23 E-value=2.7e-11 Score=104.17 Aligned_cols=78 Identities=12% Similarity=0.060 Sum_probs=65.9
Q ss_pred ccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCC-CcE
Q 048097 92 TLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGK-TSA 170 (224)
Q Consensus 92 ~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~-~~a 170 (224)
...+.+.++.++||+..+.|+|+...|++||++|++++.+. ++ .+.|++||++++|+|..|++.|.|+ +++
T Consensus 176 ~~~~~~~~~~~~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~------~~--~~~l~~GD~i~~~~~~~H~~~n~g~~~~~ 247 (261)
T 1rc6_A 176 GFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLD------NN--WIPVKKGDYIFMGAYSLQAGYGVGRGEAF 247 (261)
T ss_dssp TCSEEEEEEEECTTCCBEEEEEESSCEEEEEEESEEEEESS------SC--EEEEETTCEEEECSSEEEEEEEC----CE
T ss_pred CCceEEEEEEECCCCccCcccCCCceEEEEEEEeEEEEEEC------CE--EEEeCCCCEEEECCCCcEEeEeCCCCcCE
Confidence 44688999999999999999998789999999999999863 23 4899999999999999999999999 999
Q ss_pred EEEEEEe
Q 048097 171 VAFAGFS 177 (224)
Q Consensus 171 ~~l~~~~ 177 (224)
+++...+
T Consensus 248 ~~l~~~d 254 (261)
T 1rc6_A 248 SYIYSKD 254 (261)
T ss_dssp EEEEEEE
T ss_pred EEEEEec
Confidence 8886543
No 65
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=99.22 E-value=3.8e-11 Score=98.13 Aligned_cols=78 Identities=21% Similarity=0.158 Sum_probs=65.7
Q ss_pred ccccceEEEEEEEcCCCcCC--CccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCC
Q 048097 90 LNTLGTSAVRIDYAPYGQNP--PHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGK 167 (224)
Q Consensus 90 L~~lgis~~~v~l~pgg~~p--pH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~ 167 (224)
..+..+.+.+++++||+..+ +|+|+ ..|++||++|++++.+. ++ ...|++||+++||++.+|.+.|.|+
T Consensus 99 ~~~~~~~~~~~~~~pg~~~~~~~H~h~-~~E~~~Vl~G~~~~~~~------~~--~~~l~~GD~i~i~~~~~H~~~n~~~ 169 (192)
T 1y9q_A 99 AADTGLEIFEITLLDHHQQMSSPHALG-VIEYIHVLEGIMKVFFD------EQ--WHELQQGEHIRFFSDQPHGYAAVTE 169 (192)
T ss_dssp ETTTTEEEEEEEECTTCEEEECCCSTT-CEEEEEEEESCEEEEET------TE--EEEECTTCEEEEECSSSEEEEESSS
T ss_pred CCCCcEEEEEEEECCCCCccCCCCCCC-CEEEEEEEEeEEEEEEC------CE--EEEeCCCCEEEEcCCCCeEeECCCC
Confidence 34457899999999999765 67775 58999999999999763 33 4799999999999999999999999
Q ss_pred CcEEEEEEEe
Q 048097 168 TSAVAFAGFS 177 (224)
Q Consensus 168 ~~a~~l~~~~ 177 (224)
+++ +++++.
T Consensus 170 ~~~-~l~v~~ 178 (192)
T 1y9q_A 170 KAV-FQNIVA 178 (192)
T ss_dssp CEE-EEEEEE
T ss_pred CcE-EEEEEe
Confidence 999 776654
No 66
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=99.18 E-value=9.1e-11 Score=86.55 Aligned_cols=77 Identities=21% Similarity=0.191 Sum_probs=62.8
Q ss_pred ccceEEEEEEEcCCCcCCCccCCCCcEE-EEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcE
Q 048097 92 TLGTSAVRIDYAPYGQNPPHTHPRATEI-LVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSA 170 (224)
Q Consensus 92 ~lgis~~~v~l~pgg~~ppH~Hp~a~Ei-~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a 170 (224)
+.++.+.++.++||...++|+|+...|+ +||++|++++.+.+. + ...|++||++++|+|..|...|.++ .
T Consensus 30 ~~~~~~~~~~~~~g~~~~~H~H~~~~e~~~~vl~G~~~~~~~~~-----~--~~~l~~Gd~~~ip~~~~H~~~~~~~--~ 100 (110)
T 2q30_A 30 SENFKIVSFTFKAGQELPVHSHNIEGELNIVVLEGEGEFVGDGD-----A--VIPAPRGAVLVAPISTPHGVRAVTD--M 100 (110)
T ss_dssp CSSCEEEEEEECTTCEEEEECCSSSCEEEEEEEESCEEEECGGG-----C--EEEECTTEEEEEETTSCEEEEESSS--E
T ss_pred CCCEEEEEEEECCCCcCCcccCCCCccEEEEEEeCEEEEEeCCC-----E--EEEECCCCEEEeCCCCcEEEEEcCC--c
Confidence 3467889999999999999999855788 899999999876311 2 4899999999999999999999865 4
Q ss_pred EEEEEEe
Q 048097 171 VAFAGFS 177 (224)
Q Consensus 171 ~~l~~~~ 177 (224)
.++.++.
T Consensus 101 ~~l~~~~ 107 (110)
T 2q30_A 101 KVLVTIA 107 (110)
T ss_dssp EEEEEEE
T ss_pred EEEEEEC
Confidence 5555554
No 67
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.18 E-value=5.3e-11 Score=101.44 Aligned_cols=79 Identities=13% Similarity=0.071 Sum_probs=68.5
Q ss_pred ceEEEEEEEcC-CCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEE
Q 048097 94 GTSAVRIDYAP-YGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVA 172 (224)
Q Consensus 94 gis~~~v~l~p-gg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~ 172 (224)
-+.+..++++| |+..++|+|+ ..|++||++|++++.+. ++ ...|++||++++|+|.+|...|.|++++++
T Consensus 144 ~~~~~~~~~~p~g~~~~~H~H~-~~e~~~Vl~G~~~~~i~------~~--~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~ 214 (243)
T 3h7j_A 144 WVEIMLAKIPGNGGEMPFHKHR-NEQIGICIGGGYDMTVE------GC--TVEMKFGTAYFCEPREDHGAINRSEKESKS 214 (243)
T ss_dssp TEEEEEEEECTTTEEEEEECCS-SEEEEEECSSCEEEEET------TE--EEEECTTCEEEECTTCCEEEEECSSSCEEE
T ss_pred eeEEEEEEECCCCCcCCCEeCC-CcEEEEEEECEEEEEEC------CE--EEEECCCCEEEECCCCcEEeEeCCCCCEEE
Confidence 35677888999 8889999998 58999999999999864 33 478999999999999999999999999999
Q ss_pred EEEEeCCCC
Q 048097 173 FAGFSSQFP 181 (224)
Q Consensus 173 l~~~~s~~p 181 (224)
+.++.....
T Consensus 215 l~v~~p~~~ 223 (243)
T 3h7j_A 215 INIFFPPRY 223 (243)
T ss_dssp EEEEESCSS
T ss_pred EEEEcCChh
Confidence 998875443
No 68
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=99.16 E-value=1.1e-09 Score=94.92 Aligned_cols=108 Identities=11% Similarity=0.034 Sum_probs=80.0
Q ss_pred CCCCeeeecCCCCCCc-cCCCCeeEEEccccccCcccccceEEEEEEEcCCCcCCC-ccCCCCcEEEEEEecEEEEEEEe
Q 048097 56 KAEDFFLSGLDKPGNT-ENRLGFNVTNANVEQIPGLNTLGTSAVRIDYAPYGQNPP-HTHPRATEILVVLEGTLYVGFVT 133 (224)
Q Consensus 56 ~~~df~f~~~~~~~~~-~~~~g~~v~~~~~~~~p~L~~lgis~~~v~l~pgg~~pp-H~Hp~a~Ei~~Vl~G~~~v~~v~ 133 (224)
.++.++.+....+... ....|.....+... ..+..+.+.++.++||+..+. |+|+ ..|++||++|++++.+.
T Consensus 146 ~p~~~v~~~~d~~~~~~~~~~g~~~~~l~~~----~~~~~~~~~~~~l~pg~~~~~~H~H~-~~E~~yVl~G~~~~~i~- 219 (274)
T 1sef_A 146 QPYKVVGSIHDQQPEEYEGMTDVLLWSLLPK----EFDFDMNMHILSFEPGASHAYIETHV-QEHGAYLISGQGMYNLD- 219 (274)
T ss_dssp CCCCEEEEGGGSCCEEGGGCTTEEEEECSCS----STTCSEEEEEEEECTTCBCSSCBCCS-CCEEEEEEECEEEEEET-
T ss_pred CCcceeCChHHCCccccCCCCCeEEEEeCCc----ccCCCEEEEEEEECCCCccCcceecc-CeEEEEEEeCEEEEEEC-
Confidence 3445555544333321 12345545544332 223478899999999999988 9996 68999999999999863
Q ss_pred CCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCC-CcEEEEEEE
Q 048097 134 SNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGK-TSAVAFAGF 176 (224)
Q Consensus 134 ~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~-~~a~~l~~~ 176 (224)
++ ...|++||+++||++.+|.+.|.|+ +++.++...
T Consensus 220 -----~~--~~~l~~GD~i~i~~~~~H~~~n~~~~~~~~~l~~~ 256 (274)
T 1sef_A 220 -----NE--WYPVEKGDYIFMSAYVPQAAYAVGREEPLMYVYSK 256 (274)
T ss_dssp -----TE--EEEEETTCEEEECTTCCEEEEEECSSSCEEEEEEE
T ss_pred -----CE--EEEECCCCEEEECCCCCEEEEeCCCCCCEEEEEEE
Confidence 33 4899999999999999999999999 888887654
No 69
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=99.14 E-value=2.5e-10 Score=85.41 Aligned_cols=72 Identities=14% Similarity=0.097 Sum_probs=60.3
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEE
Q 048097 94 GTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAF 173 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l 173 (224)
++.+..+.++||...++|+|+ ..|++||++|++++.+. ++ ...|++||++++|+|.+|...|. +++.++
T Consensus 37 ~~~~~~~~~~~g~~~~~H~h~-~~e~~~vl~G~~~~~i~------~~--~~~l~~Gd~i~i~~~~~H~~~~~--~~~~~~ 105 (114)
T 2ozj_A 37 RVQISLFSFADGESVSEEEYF-GDTLYLILQGEAVITFD------DQ--KIDLVPEDVLMVPAHKIHAIAGK--GRFKML 105 (114)
T ss_dssp SEEEEEEEEETTSSCCCBCCS-SCEEEEEEEEEEEEEET------TE--EEEECTTCEEEECTTCCBEEEEE--EEEEEE
T ss_pred CceEEEEEECCCCccccEECC-CCeEEEEEeCEEEEEEC------CE--EEEecCCCEEEECCCCcEEEEeC--CCcEEE
Confidence 356777788999999999998 69999999999999863 33 58999999999999999999986 456666
Q ss_pred EEE
Q 048097 174 AGF 176 (224)
Q Consensus 174 ~~~ 176 (224)
.+.
T Consensus 106 ~i~ 108 (114)
T 2ozj_A 106 QIT 108 (114)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 70
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=99.13 E-value=1.7e-10 Score=101.42 Aligned_cols=78 Identities=19% Similarity=0.103 Sum_probs=68.1
Q ss_pred cceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEE
Q 048097 93 LGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVA 172 (224)
Q Consensus 93 lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~ 172 (224)
..+++.++.+.||+..++|||++..|++||++|++++.+. ++ ...|++||++++|+|.+|.+.|.++ ++.+
T Consensus 44 ~~~~~~~~~~~pg~~~~~h~H~~~~e~~~Vl~G~~~~~~~------~~--~~~l~~Gd~~~~p~~~~H~~~n~~~-~~~~ 114 (337)
T 1y3t_A 44 DLFEIVLLSGGKGDAFPLHVHKDTHEGILVLDGKLELTLD------GE--RYLLISGDYANIPAGTPHSYRMQSH-RTRL 114 (337)
T ss_dssp SSEEEEEEEECTTCEEEEEECTTCCEEEEEEESCEEEEET------TE--EEEECTTCEEEECTTCCEEEEECST-TEEE
T ss_pred CeEEEEEEEeCCCCCCCceeCCCceEEEEEEECEEEEEEC------CE--EEEECCCCEEEECCCCcEEEEECCC-CeEE
Confidence 3689999999999999999998789999999999999863 33 4899999999999999999999987 5888
Q ss_pred EEEEeCC
Q 048097 173 FAGFSSQ 179 (224)
Q Consensus 173 l~~~~s~ 179 (224)
+.++...
T Consensus 115 ~~~~~p~ 121 (337)
T 1y3t_A 115 VSYTMKG 121 (337)
T ss_dssp EEEEETT
T ss_pred EEEECCC
Confidence 8776544
No 71
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=99.13 E-value=2.5e-10 Score=102.80 Aligned_cols=77 Identities=21% Similarity=0.212 Sum_probs=67.6
Q ss_pred cceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEE
Q 048097 93 LGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVA 172 (224)
Q Consensus 93 lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~ 172 (224)
..+.+....++||+..++|+|+ ..|++||++|+++++.++ ++ ...+++||++++|+|..|...|.|++++++
T Consensus 98 ~~l~~~~~~l~PG~~~~~H~H~-~~e~~yVl~G~g~~t~v~-----g~--~~~l~~GD~~~iP~g~~H~~~n~~~~~~~~ 169 (354)
T 2d40_A 98 ATLYAGLQLIMPGEVAPSHRHN-QSALRFIVEGKGAFTAVD-----GE--RTPMNEGDFILTPQWRWHDHGNPGDEPVIW 169 (354)
T ss_dssp SSCEEEEEEECTTCEEEEEEES-SCEEEEEEECSSCEEEET-----TE--EEECCTTCEEEECTTSCEEEECCSSSCEEE
T ss_pred CcEEEEEEEECCCCCcCCeecC-cceEEEEEEEEEEEEEEC-----CE--EEEEcCCCEEEECCCCcEEeEeCCCCCEEE
Confidence 3678999999999999999997 689999999999885553 33 589999999999999999999999999998
Q ss_pred EEEEe
Q 048097 173 FAGFS 177 (224)
Q Consensus 173 l~~~~ 177 (224)
+.+.+
T Consensus 170 l~v~d 174 (354)
T 2d40_A 170 LDGLD 174 (354)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 87754
No 72
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=99.12 E-value=4.9e-10 Score=100.90 Aligned_cols=89 Identities=17% Similarity=0.034 Sum_probs=73.1
Q ss_pred CCeeEEEcccc-ccCcccccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEE
Q 048097 75 LGFNVTNANVE-QIPGLNTLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFV 153 (224)
Q Consensus 75 ~g~~v~~~~~~-~~p~L~~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v 153 (224)
.|+.+..++.. ..+.+.++ ++....++||+..++|+|+. +|++||++|++++.+. ++ +..+++||+++
T Consensus 249 ~G~~~~~~np~t~~~~~~ti--~~~~~~l~pG~~~~~H~h~~-~ev~~v~~G~g~~~v~------~~--~~~~~~GD~~~ 317 (354)
T 2d40_A 249 DGYKMRYVNPVTGGYPMPSM--GAFLQLLPKGFASRVARTTD-STIYHVVEGSGQVIIG------NE--TFSFSAKDIFV 317 (354)
T ss_dssp TBEEEEECCTTTSSCSSSSC--EEEEEEECTTCBCCCBEESS-CEEEEEEEEEEEEEET------TE--EEEEETTCEEE
T ss_pred CCeEEEEeCCCcCCCCCCcc--eeEEEEECCCCCCCceecCC-cEEEEEEeCeEEEEEC------CE--EEEEcCCCEEE
Confidence 46678888854 67777765 45566899999999999995 5999999999999872 33 58999999999
Q ss_pred EcCCCeeEEEeCCCCcEEEEEEE
Q 048097 154 FPIGLIHFQVNIGKTSAVAFAGF 176 (224)
Q Consensus 154 ~P~G~~H~~~N~G~~~a~~l~~~ 176 (224)
+|++..|.+.|. ++++++++.
T Consensus 318 vP~~~~H~~~n~--e~~~l~~~~ 338 (354)
T 2d40_A 318 VPTWHGVSFQTT--QDSVLFSFS 338 (354)
T ss_dssp ECTTCCEEEEEE--EEEEEEEEE
T ss_pred ECCCCeEEEEeC--CCEEEEEEc
Confidence 999999999994 678887653
No 73
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=99.11 E-value=6.7e-10 Score=99.75 Aligned_cols=81 Identities=19% Similarity=0.145 Sum_probs=64.1
Q ss_pred ceEEEEEEEcCCC-cCC--CccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcE
Q 048097 94 GTSAVRIDYAPYG-QNP--PHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSA 170 (224)
Q Consensus 94 gis~~~v~l~pgg-~~p--pH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a 170 (224)
.+++. ..+.|++ ..+ +|+|++..|++||++|++++.+.+.+ ++...+.|++||+++||+|.+|.+.|.++++
T Consensus 47 ~~~~~-~~~~p~g~~~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~~---g~~~~~~L~~GD~v~ip~g~~H~~~n~~~~~- 121 (350)
T 1juh_A 47 AFTLM-GTNAPHSDALGVLPHIHQKHYENFYCNKGSFQLWAQSGN---ETQQTRVLSSGDYGSVPRNVTHTFQIQDPDT- 121 (350)
T ss_dssp SCEEE-EEEECCCSSCSSCCEECSSCEEEEEEEESEEEEEEEETT---SCCEEEEEETTCEEEECTTEEEEEEECSTTE-
T ss_pred cEEEE-EEEcCCCCCCCCccccCCCceEEEEEEEEEEEEEECCcC---CceEEEEECCCCEEEECCCCcEEEEeCCCCC-
Confidence 46666 4555555 455 89999889999999999999887633 3323689999999999999999999999876
Q ss_pred EEEEEEeCC
Q 048097 171 VAFAGFSSQ 179 (224)
Q Consensus 171 ~~l~~~~s~ 179 (224)
+++.++...
T Consensus 122 ~~l~v~~p~ 130 (350)
T 1juh_A 122 EMTGVIVPG 130 (350)
T ss_dssp EEEEEEESS
T ss_pred EEEEEEcCc
Confidence 777776543
No 74
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=99.07 E-value=1.4e-09 Score=92.96 Aligned_cols=76 Identities=14% Similarity=0.143 Sum_probs=66.2
Q ss_pred ccceEEEEEEEcCCCcCCC-ccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcE
Q 048097 92 TLGTSAVRIDYAPYGQNPP-HTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSA 170 (224)
Q Consensus 92 ~lgis~~~v~l~pgg~~pp-H~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a 170 (224)
+.++.+.+++++||+.++. |.| ...|.+||++|++.+.+. ++ ++.|++||+++++.+.+|++.|.|++++
T Consensus 162 ~~~~~~~~~tl~PG~~~~~~~~h-~~ee~~~vLeG~~~~~~~------~~--~~~l~~GD~~~~~~~~pH~~~n~g~~~~ 232 (246)
T 1sfn_A 162 AFDFMVSTMSFAPGASLPYAEVH-YMEHGLLMLEGEGLYKLE------EN--YYPVTAGDIIWMGAHCPQWYGALGRNWS 232 (246)
T ss_dssp TCSEEEEEEEECTTCBCSSCBCC-SSCEEEEEEECEEEEEET------TE--EEEEETTCEEEECTTCCEEEEEESSSCE
T ss_pred CCCeEEEEEEECCCCccCcccCC-CceEEEEEEECEEEEEEC------CE--EEEcCCCCEEEECCCCCEEEEcCCCCCE
Confidence 4578999999999999987 455 478999999999999863 34 5799999999999999999999999999
Q ss_pred EEEEEE
Q 048097 171 VAFAGF 176 (224)
Q Consensus 171 ~~l~~~ 176 (224)
+++..=
T Consensus 233 ~yl~~k 238 (246)
T 1sfn_A 233 KYLLYK 238 (246)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 888653
No 75
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=99.06 E-value=2.5e-10 Score=82.99 Aligned_cols=69 Identities=26% Similarity=0.485 Sum_probs=53.2
Q ss_pred cccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcE
Q 048097 91 NTLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSA 170 (224)
Q Consensus 91 ~~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a 170 (224)
++..+.+.++. +..++|+|+...|++||++|++++.+. ++ ...+++||++++|+|..|...|.+ +.
T Consensus 29 ~~~~~~~~~~~----~~~~~H~H~~~~e~~~v~~G~~~~~~~------~~--~~~l~~Gd~~~ip~~~~H~~~~~~--~~ 94 (102)
T 3d82_A 29 NDYQFKLVKVE----GEFVWHEHADTDEVFIVMEGTLQIAFR------DQ--NITLQAGEMYVIPKGVEHKPMAKE--EC 94 (102)
T ss_dssp TTEEEEEEEEE----EECCCBCCTTCCEEEEEEESEEEEECS------SC--EEEEETTEEEEECTTCCBEEEEEE--EE
T ss_pred CCCEEEEEEEC----CCCCceeCCCCcEEEEEEeCEEEEEEC------CE--EEEEcCCCEEEECCCCeEeeEcCC--CC
Confidence 33344555543 568999999769999999999998763 23 488999999999999999999974 44
Q ss_pred EEE
Q 048097 171 VAF 173 (224)
Q Consensus 171 ~~l 173 (224)
.++
T Consensus 95 ~~l 97 (102)
T 3d82_A 95 KIM 97 (102)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 76
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=99.06 E-value=1.7e-09 Score=95.09 Aligned_cols=75 Identities=20% Similarity=0.145 Sum_probs=62.6
Q ss_pred EEEEEEcC-CCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEEEE
Q 048097 97 AVRIDYAP-YGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAFAG 175 (224)
Q Consensus 97 ~~~v~l~p-gg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l~~ 175 (224)
...+.+.| |...++|||+...|++||++|++++.+. ++ ++.|++||++++|++..|++.|.++ ++.++.+
T Consensus 219 ~~~~~~~p~g~~~~~h~H~~~~e~~~vl~G~~~~~i~------~~--~~~l~~GD~~~ip~~~~H~~~n~~~-~~~~l~v 289 (337)
T 1y3t_A 219 IVVSSEGPKGDRIVDHYHEYHTETFYCLEGQMTMWTD------GQ--EIQLNPGDFLHVPANTVHSYRLDSH-YTKMVGV 289 (337)
T ss_dssp EEEEEEECSCCCCCCEECSSCEEEEEEEESCEEEEET------TE--EEEECTTCEEEECTTCCEEEEECSS-SEEEEEE
T ss_pred EEEEEEcCCCCCCCCcCCCCCcEEEEEEeCEEEEEEC------CE--EEEECCCCEEEECCCCeEEEEECCC-CeEEEEE
Confidence 34456656 5678999998779999999999999873 33 5899999999999999999999998 8988888
Q ss_pred EeCCC
Q 048097 176 FSSQF 180 (224)
Q Consensus 176 ~~s~~ 180 (224)
++...
T Consensus 290 ~~~~~ 294 (337)
T 1y3t_A 290 LVPGL 294 (337)
T ss_dssp EESST
T ss_pred EcCcc
Confidence 76543
No 77
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=99.06 E-value=5e-10 Score=85.88 Aligned_cols=73 Identities=18% Similarity=0.127 Sum_probs=60.3
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEE
Q 048097 94 GTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAF 173 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l 173 (224)
.+++..++++||+..+.| ....|++||++|++++.+. ++ ...|++||+++||+|..|.+.|.+ ++++++
T Consensus 39 ~~~~~~~~~~pG~~~~~H--~~~~E~~~Vl~G~~~~~~~------g~--~~~l~~GD~v~ip~g~~H~~~~~~-~~~~~l 107 (119)
T 3lwc_A 39 PITIGYGRYAPGQSLTET--MAVDDVMIVLEGRLSVSTD------GE--TVTAGPGEIVYMPKGETVTIRSHE-EGALTA 107 (119)
T ss_dssp CCEEEEEEECTTCEEEEE--CSSEEEEEEEEEEEEEEET------TE--EEEECTTCEEEECTTCEEEEEEEE-EEEEEE
T ss_pred CEEEEEEEECCCCCcCcc--CCCCEEEEEEeCEEEEEEC------CE--EEEECCCCEEEECCCCEEEEEcCC-CCeEEE
Confidence 578889999999876544 4689999999999999872 33 489999999999999999998875 667777
Q ss_pred EEEe
Q 048097 174 AGFS 177 (224)
Q Consensus 174 ~~~~ 177 (224)
.+..
T Consensus 108 ~v~~ 111 (119)
T 3lwc_A 108 YVTY 111 (119)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 6654
No 78
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.05 E-value=3.9e-10 Score=96.03 Aligned_cols=74 Identities=18% Similarity=0.148 Sum_probs=64.5
Q ss_pred eEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEE-EcCCCeeEEEeCCCCcEEEE
Q 048097 95 TSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFV-FPIGLIHFQVNIGKTSAVAF 173 (224)
Q Consensus 95 is~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v-~P~G~~H~~~N~G~~~a~~l 173 (224)
..+.+..++||...++|||+ ..|++||++|++++.+. ++ ...|++||.++ +|+|..|...|.++++++++
T Consensus 34 ~~~~~~~~~pg~~~~~H~H~-~~e~~~Vl~G~~~~~~~------~~--~~~l~~Gd~i~~ip~~~~H~~~n~~~~~~~~l 104 (243)
T 3h7j_A 34 TEVLMSYVPPHTNVEPHQHK-EVQIGMVVSGELMMTVG------DV--TRKMTALESAYIAPPHVPHGARNDTDQEVIAI 104 (243)
T ss_dssp EEEEEEEECTTEEEEEECCS-SEEEEEEEESEEEEEET------TE--EEEEETTTCEEEECTTCCEEEEECSSSCEEEE
T ss_pred CEEEEEEECCCCccCCEECC-CcEEEEEEEeEEEEEEC------CE--EEEECCCCEEEEcCCCCcEeeEeCCCCcEEEE
Confidence 46777789999999999998 69999999999999863 33 48999999885 99999999999999999888
Q ss_pred EEEe
Q 048097 174 AGFS 177 (224)
Q Consensus 174 ~~~~ 177 (224)
.+..
T Consensus 105 ~i~r 108 (243)
T 3h7j_A 105 DIKR 108 (243)
T ss_dssp EEEE
T ss_pred EEec
Confidence 7643
No 79
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=99.04 E-value=4.7e-10 Score=97.79 Aligned_cols=77 Identities=19% Similarity=0.169 Sum_probs=66.6
Q ss_pred ccceEEEEEEEcCCCcC--CCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCc
Q 048097 92 TLGTSAVRIDYAPYGQN--PPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTS 169 (224)
Q Consensus 92 ~lgis~~~v~l~pgg~~--ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~ 169 (224)
+..+.+.+++++||+.. +.|.|+ ..|++||++|++++.+.+ + ++.|++||.++||+|..|.+.|.|+++
T Consensus 65 ~~~~~~~~~~l~PG~~~~~~~h~H~-~eE~~~Vl~G~l~v~v~g------~--~~~L~~GD~i~ip~~~~H~~~N~g~~~ 135 (278)
T 1sq4_A 65 AETFSQYIVELAPNGGSDKPEQDPN-AEAVLFVVEGELSLTLQG------Q--VHAMQPGGYAFIPPGADYKVRNTTGQH 135 (278)
T ss_dssp CCSCEEEEEEEEEEEEESSCCCCTT-EEEEEEEEESCEEEEESS------C--EEEECTTEEEEECTTCCEEEECCSSSC
T ss_pred CCcEEEEEEEECCCCccCCCCcCCC-ceEEEEEEeCEEEEEECC------E--EEEECCCCEEEECCCCcEEEEECCCCC
Confidence 34689999999999876 567786 799999999999998742 3 489999999999999999999999999
Q ss_pred EEEEEEEe
Q 048097 170 AVAFAGFS 177 (224)
Q Consensus 170 a~~l~~~~ 177 (224)
++++++..
T Consensus 136 ~~~l~v~~ 143 (278)
T 1sq4_A 136 TRFHWIRK 143 (278)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEe
Confidence 99887764
No 80
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=99.04 E-value=4.9e-10 Score=96.28 Aligned_cols=77 Identities=16% Similarity=0.115 Sum_probs=65.9
Q ss_pred cceEEEEEEEcCCCcCCCccC-CCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEE
Q 048097 93 LGTSAVRIDYAPYGQNPPHTH-PRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAV 171 (224)
Q Consensus 93 lgis~~~v~l~pgg~~ppH~H-p~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~ 171 (224)
..+.+.+++++||+....|.| +...|++||++|++++.+. ++ .+.|++||.++||++.+|.+.|.|+++++
T Consensus 57 ~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~~------~~--~~~L~~Gd~~~~~~~~~H~~~N~~~~~~~ 128 (261)
T 1rc6_A 57 ASFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAE------GK--TFALSEGGYLYCPPGSLMTFVNAQAEDSQ 128 (261)
T ss_dssp CSSEEEEEEEEEEEEESSCSCCTTEEEEEEEEESEEEEEET------TE--EEEEETTEEEEECTTCCCEEEECSSSCEE
T ss_pred CcEEEEEEEEcCCCccCCCCCCCCceEEEEEEEeEEEEEEC------CE--EEEECCCCEEEECCCCCEEEEeCCCCCEE
Confidence 367889999999997766554 5568999999999999863 33 58999999999999999999999999999
Q ss_pred EEEEEe
Q 048097 172 AFAGFS 177 (224)
Q Consensus 172 ~l~~~~ 177 (224)
++++..
T Consensus 129 ~l~v~~ 134 (261)
T 1rc6_A 129 IFLYKR 134 (261)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 988764
No 81
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=99.02 E-value=4.7e-10 Score=83.14 Aligned_cols=68 Identities=18% Similarity=0.222 Sum_probs=52.7
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEEE
Q 048097 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAFA 174 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l~ 174 (224)
..++.+.||. .++|+|+...|++||++|++++.+.+ ++ ...+++||++++|+|..|...|. +++.++.
T Consensus 30 ~~~~~~~~g~-~~~H~H~~~~E~~~Vl~G~~~~~~~~-----~~--~~~l~~Gd~~~ip~~~~H~~~~~--~~~~~l~ 97 (107)
T 2i45_A 30 QFHLVKLLGD-YGWHTHGYSDKVLFAVEGDMAVDFAD-----GG--SMTIREGEMAVVPKSVSHRPRSE--NGCSLVL 97 (107)
T ss_dssp EEEEEEEEEE-CCCBCC--CCEEEEESSSCEEEEETT-----SC--EEEECTTEEEEECTTCCEEEEEE--EEEEEEE
T ss_pred EEEEEECCCC-CcceeCCCCCEEEEEEeCEEEEEECC-----Cc--EEEECCCCEEEECCCCcEeeEeC--CCeEEEE
Confidence 4456677776 56999986699999999999998643 13 48999999999999999999995 4555553
No 82
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=99.00 E-value=1.6e-09 Score=99.00 Aligned_cols=78 Identities=17% Similarity=0.093 Sum_probs=68.7
Q ss_pred ccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEe-CCCCcE
Q 048097 92 TLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVN-IGKTSA 170 (224)
Q Consensus 92 ~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N-~G~~~a 170 (224)
+..+.+....+.||+..++|.|. ..|+.||++|++.+..++ ++ ...+++||++++|+|..|...| .|++++
T Consensus 120 t~~L~a~~~~l~PG~~~~~HrH~-~~ev~~IleG~G~~t~v~-----G~--~~~~~~GD~i~~P~g~~H~~~N~~gde~l 191 (394)
T 3bu7_A 120 CGWLFSGIQTMKAGERAGAHRHA-ASALRFIMEGSGAYTIVD-----GH--KVELGANDFVLTPNGTWHEHGILESGTEC 191 (394)
T ss_dssp BTTBEEEEEEECTTCBCCCEEES-SCEEEEEEECSCEEEEET-----TE--EEEECTTCEEEECTTCCEEEEECTTCCCE
T ss_pred CCeeEEEEEEECCCCCcCCccCC-cceEEEEEEeeEEEEEEC-----CE--EEEEcCCCEEEECcCCCEEEEcCCCCCCE
Confidence 44789999999999999999997 579999999999764443 33 4899999999999999999999 999999
Q ss_pred EEEEEEe
Q 048097 171 VAFAGFS 177 (224)
Q Consensus 171 ~~l~~~~ 177 (224)
+++++++
T Consensus 192 ~~l~v~d 198 (394)
T 3bu7_A 192 IWQDGLD 198 (394)
T ss_dssp EEEEEEC
T ss_pred EEEEccc
Confidence 9998775
No 83
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=99.00 E-value=7.8e-10 Score=86.48 Aligned_cols=72 Identities=22% Similarity=0.077 Sum_probs=59.9
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEE
Q 048097 94 GTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAF 173 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l 173 (224)
.+++.+++++|| ..|||....|++||++|++++.+. ++ ...|++||+++||+|..|.+.| .++++++
T Consensus 56 ~~~~~~~~~~pG---~~~~h~~~~E~~~VLeG~~~l~~~------g~--~~~l~~GD~i~~p~g~~h~~~~--~~~~~~l 122 (133)
T 2pyt_A 56 SMAAGFMQWDNA---FFPWTLNYDEIDMVLEGELHVRHE------GE--TMIAKAGDVMFIPKGSSIEFGT--PTSVRFL 122 (133)
T ss_dssp SSEEEEEEEEEE---EEEEECSSEEEEEEEEEEEEEEET------TE--EEEEETTCEEEECTTCEEEEEE--EEEEEEE
T ss_pred cEEEEEEEECCC---CccccCCCCEEEEEEECEEEEEEC------CE--EEEECCCcEEEECCCCEEEEEe--CCCEEEE
Confidence 578889999999 467776689999999999999863 23 4799999999999999999987 4578887
Q ss_pred EEEeC
Q 048097 174 AGFSS 178 (224)
Q Consensus 174 ~~~~s 178 (224)
.++..
T Consensus 123 ~v~~p 127 (133)
T 2pyt_A 123 YVAWP 127 (133)
T ss_dssp EEEES
T ss_pred EEEcC
Confidence 77643
No 84
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=99.00 E-value=1.4e-09 Score=91.65 Aligned_cols=77 Identities=14% Similarity=0.107 Sum_probs=67.7
Q ss_pred ccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEE
Q 048097 92 TLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAV 171 (224)
Q Consensus 92 ~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~ 171 (224)
...+.+..+.++||...|.|.|+ .+|+.||++|++++.+.+ ++ .+.+++||++++|+|..|.+. ++++|+.
T Consensus 129 s~~l~lG~v~l~PG~~yP~HsHp-~EEiy~VLsG~~e~~v~~-----g~--~~~l~pGd~v~ipsgv~Ha~r-t~dePll 199 (217)
T 4b29_A 129 TQSLRVTVGYWGPGLDYGWHEHL-PEELYSVVSGRALFHLRN-----AP--DLMLEPGQTRFHPANAPHAMT-TLTDPIL 199 (217)
T ss_dssp CSSCEEEEEEECSSCEEEEEECS-SEEEEEEEEECEEEEETT-----SC--CEEECTTCEEEECTTCCEEEE-CCSSCEE
T ss_pred CCeEEEEEEEECCCCcCCCCCCC-CceEEEEEeCCEEEEECC-----CC--EEecCCCCEEEcCCCCceeEE-ECCccEE
Confidence 44789999999999999999998 799999999999998752 22 489999999999999999998 5899998
Q ss_pred EEEEEe
Q 048097 172 AFAGFS 177 (224)
Q Consensus 172 ~l~~~~ 177 (224)
++.+..
T Consensus 200 alwvW~ 205 (217)
T 4b29_A 200 TLVLWR 205 (217)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 887775
No 85
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=98.99 E-value=2.6e-09 Score=80.61 Aligned_cols=79 Identities=19% Similarity=0.182 Sum_probs=58.5
Q ss_pred ccceEEEEEEEcCCCcCCCc--cCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCC-
Q 048097 92 TLGTSAVRIDYAPYGQNPPH--THPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKT- 168 (224)
Q Consensus 92 ~lgis~~~v~l~pgg~~ppH--~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~- 168 (224)
+.++.+.++. .+|...+++ +|....|++||++|++++.+.+.. . ...|++||.++||+|..|...|.+++
T Consensus 28 ~~~~~i~~i~-~~g~~~~~~~~~~~~~~E~~~Vl~G~~~l~~~~~~----~--~~~l~~Gd~i~ipa~~~H~~~n~~~~~ 100 (112)
T 2opk_A 28 RKGLKIERII-SNGQASPPGFWYDSPQDEWVMVVSGSAGIECEGDT----A--PRVMRPGDWLHVPAHCRHRVAWTDGGE 100 (112)
T ss_dssp ETTEEEEEEE-ESSCCCCTTCCBCCSSEEEEEEEESCEEEEETTCS----S--CEEECTTEEEEECTTCCEEEEEECSSS
T ss_pred CCCEEEEEEE-eCCccCCCCccccCCccEEEEEEeCeEEEEECCEE----E--EEEECCCCEEEECCCCcEEEEeCCCCC
Confidence 3466777775 445555552 344578999999999999874321 0 16899999999999999999999976
Q ss_pred cEEEEEEEe
Q 048097 169 SAVAFAGFS 177 (224)
Q Consensus 169 ~a~~l~~~~ 177 (224)
++++++++.
T Consensus 101 ~~~~l~v~~ 109 (112)
T 2opk_A 101 PTVWLAVHC 109 (112)
T ss_dssp CEEEEEEEE
T ss_pred CEEEEEEEE
Confidence 566676664
No 86
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=98.99 E-value=8.5e-10 Score=95.58 Aligned_cols=76 Identities=14% Similarity=0.119 Sum_probs=65.1
Q ss_pred cceEEEEEEEcCCCcCCCcc-CCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEE
Q 048097 93 LGTSAVRIDYAPYGQNPPHT-HPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAV 171 (224)
Q Consensus 93 lgis~~~v~l~pgg~~ppH~-Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~ 171 (224)
..+.+.+++++||+....|. |+...|++||++|++++.+. ++ +..|++||.++||++.+|.+.|.|+++++
T Consensus 60 ~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~~------~~--~~~L~~GD~~~~~~~~~H~~~N~~~~~~~ 131 (274)
T 1sef_A 60 ATFVDYIATFHKNGQQTTGFGGDGIQTLVYVIDGRLRVSDG------QE--THELEAGGYAYFTPEMKMYLANAQEADTE 131 (274)
T ss_dssp CSSEEEEEEEEEEEEECSCSSBTTEEEEEEEEESEEEEECS------SC--EEEEETTEEEEECTTSCCEEEESSSSCEE
T ss_pred CcEEEEEEEECCCCcCCCCCCCCCceEEEEEEEeEEEEEEC------CE--EEEECCCCEEEECCCCCEEEEeCCCCCEE
Confidence 46789999999999766554 45678999999999999863 23 48999999999999999999999999999
Q ss_pred EEEEE
Q 048097 172 AFAGF 176 (224)
Q Consensus 172 ~l~~~ 176 (224)
++++.
T Consensus 132 ~l~v~ 136 (274)
T 1sef_A 132 VFLYK 136 (274)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 98876
No 87
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=98.98 E-value=1.1e-09 Score=99.28 Aligned_cols=78 Identities=19% Similarity=0.212 Sum_probs=68.1
Q ss_pred ccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEE
Q 048097 92 TLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAV 171 (224)
Q Consensus 92 ~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~ 171 (224)
+-.+.+....+.||+..++|.|. .+|+.||++|++....++ ++ +..+++||++++|+|..|...|.|+++++
T Consensus 100 t~~L~a~~~~l~PG~~~~~HrH~-~~ev~~VleG~G~~~~vd-----G~--~~~~~~GD~v~iP~g~~H~~~N~gde~l~ 171 (368)
T 3nw4_A 100 SPTMWAAIQYLGPRETAPEHRHS-QNAFRFVVEGEGVWTVVN-----GD--PVRMSRGDLLLTPGWCFHGHMNDTDQPMA 171 (368)
T ss_dssp SSSCEEEEEEECTTCEEEEEEES-SCEEEECSSCEEEEEEET-----TE--EEEEETTCEEEECTTCCEEEEECSSSCEE
T ss_pred CCceEEEEEEECCCCccCceecc-cceEEEEEecceEEEEEC-----CE--EEEEeCCCEEEECCCCcEEeEeCCCCCeE
Confidence 34689999999999999999997 689999999999533343 33 58999999999999999999999999999
Q ss_pred EEEEEe
Q 048097 172 AFAGFS 177 (224)
Q Consensus 172 ~l~~~~ 177 (224)
++.+++
T Consensus 172 ~l~v~D 177 (368)
T 3nw4_A 172 WIDGLD 177 (368)
T ss_dssp EEEEEC
T ss_pred EEEecc
Confidence 998876
No 88
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=98.97 E-value=1.6e-09 Score=91.41 Aligned_cols=73 Identities=15% Similarity=0.164 Sum_probs=62.0
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEE
Q 048097 94 GTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAF 173 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l 173 (224)
.+.+.++.++||...++|+|+ ..|++||++|++++.+. ++ .+.+++||.+++|+|.+|+..|. .+++.++
T Consensus 152 ~~~~~~~~~~~G~~~~~H~H~-~~e~~~Vl~G~~~~~i~------g~--~~~l~~Gd~i~ip~~~~H~~~~~-~~~~~~l 221 (227)
T 3rns_A 152 NLVMTIMSFWKGESLDPHKAP-GDALVTVLDGEGKYYVD------GK--PFIVKKGESAVLPANIPHAVEAE-TENFKML 221 (227)
T ss_dssp TEEEEEEEECTTCEEEEECCS-SEEEEEEEEEEEEEEET------TE--EEEEETTEEEEECTTSCEEEECC-SSCEEEE
T ss_pred CeEEEEEEECCCCccCCEECC-CcEEEEEEeEEEEEEEC------CE--EEEECCCCEEEECCCCcEEEEeC-CCCEEEE
Confidence 578899999999999999998 68999999999999863 33 58999999999999999999983 4556665
Q ss_pred EEE
Q 048097 174 AGF 176 (224)
Q Consensus 174 ~~~ 176 (224)
.++
T Consensus 222 l~~ 224 (227)
T 3rns_A 222 LIL 224 (227)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 89
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=98.97 E-value=2.5e-09 Score=92.94 Aligned_cols=104 Identities=14% Similarity=0.042 Sum_probs=76.1
Q ss_pred CCCCCCCeeeecCCCCCCccCCCCeeEEEccccccCcccccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEE
Q 048097 53 KLAKAEDFFLSGLDKPGNTENRLGFNVTNANVEQIPGLNTLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFV 132 (224)
Q Consensus 53 ~~~~~~df~f~~~~~~~~~~~~~g~~v~~~~~~~~p~L~~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v 132 (224)
+-++.+|++.+.+ |+ -.|..++..-.-. + +..+.+.+++++|||..+.|.|. ++|++||++|++++.+.
T Consensus 38 avI~~~~iv~s~l--Pg----~~~~~~~vL~sP~---~-G~~f~~~lv~l~PGg~s~~~~h~-~EEfiyVleG~l~l~l~ 106 (266)
T 4e2q_A 38 ALITPESHVYSPL--PD----WTNTLGAYLITPA---T-GSHFVMYLAKMKEMSSSGLPPQD-IERLIFVVEGAVTLTNT 106 (266)
T ss_dssp EEECGGGCCCEEC--TT----SSSEEEEEEECGG---G-TCSSEEEEEEECSSEECCCCCTT-EEEEEEEEEECEEEEC-
T ss_pred EEECccceEEeeC--CC----CcCEEEEEEcCCC---C-CCcEEEEEEEECcCCcCCCCCCC-CeEEEEEEEEEEEEEEC
Confidence 3445577777754 22 1233344333222 2 24689999999999988888664 89999999999999875
Q ss_pred eCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEEEEE
Q 048097 133 TSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAFAGF 176 (224)
Q Consensus 133 ~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l~~~ 176 (224)
+. + ++.|++||.++||++..|.+.|. ++++++++.
T Consensus 107 ~g-----~--~~~L~~Gds~y~p~~~~H~~~N~--~~Ar~l~V~ 141 (266)
T 4e2q_A 107 SS-----S--SKKLTVDSYAYLPPNFHHSLDCV--ESATLVVFE 141 (266)
T ss_dssp -C-----C--CEEECTTEEEEECTTCCCEEEES--SCEEEEEEE
T ss_pred CC-----c--EEEEcCCCEEEECCCCCEEEEeC--CCEEEEEEE
Confidence 11 2 38999999999999999999994 688888774
No 90
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=98.95 E-value=7.9e-09 Score=83.18 Aligned_cols=71 Identities=21% Similarity=0.125 Sum_probs=57.8
Q ss_pred eEEEEEEEcCCCcCCCccCCCCcEEEEEEe--cEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEE
Q 048097 95 TSAVRIDYAPYGQNPPHTHPRATEILVVLE--GTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVA 172 (224)
Q Consensus 95 is~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~--G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~ 172 (224)
+++.++++ ++..++|||+...|++||++ |++++.+. ++ .+.|++||++++|+|..|.+.+ ++++
T Consensus 47 ~sv~~v~~--g~~~~~H~H~~~~E~~yVLe~~G~g~v~id------ge--~~~l~~GD~v~IPpg~~H~i~g----~l~~ 112 (157)
T 4h7l_A 47 VSVHYTQI--TKAARTHYHREHQEIYVVLDHAAHATIELN------GQ--SYPLTKLLAISIPPLVRHRIVG----EATI 112 (157)
T ss_dssp CEEEEEEE--CSCCCCBBCSSCEEEEEEEEECTTCEEEET------TE--EEECCTTEEEEECTTCCEEEES----CEEE
T ss_pred EEEEEEeC--CCCccceECCCCcEEEEEEecCcEEEEEEC------CE--EEEeCCCCEEEECCCCeEeeEC----CEEE
Confidence 46666665 44569999998889999999 99999873 34 4899999999999999999973 6888
Q ss_pred EEEEeCC
Q 048097 173 FAGFSSQ 179 (224)
Q Consensus 173 l~~~~s~ 179 (224)
++++...
T Consensus 113 L~I~~Pp 119 (157)
T 4h7l_A 113 INIVSPP 119 (157)
T ss_dssp EEEEESS
T ss_pred EEEECCC
Confidence 8877643
No 91
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=98.95 E-value=5.5e-09 Score=95.44 Aligned_cols=92 Identities=21% Similarity=0.153 Sum_probs=73.2
Q ss_pred CCeeEEEccccccCcccccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEE
Q 048097 75 LGFNVTNANVEQIPGLNTLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVF 154 (224)
Q Consensus 75 ~g~~v~~~~~~~~p~L~~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~ 154 (224)
.|..+..++..+= +-....+.+....++||+..++|.|. ..|++||++|++++.+. ++ +..+++||++++
T Consensus 275 ~~~~l~l~nP~~g-~~~~~tl~~~~~~l~PG~~~~~HrH~-~~~v~~VleG~G~~~V~------ge--~~~~~~GD~~~i 344 (394)
T 3bu7_A 275 DGLILRYTNPQTG-GHPMLTMGASMQMLRPGEHTKAHRHT-GNVIYNVAKGQGYSIVG------GK--RFDWSEHDIFCV 344 (394)
T ss_dssp TBEEEEECCTTTS-SCSSSSCEEEEEEECTTCBCCCEEES-SCEEEEEEECCEEEEET------TE--EEEECTTCEEEE
T ss_pred CceEEEEeCCCCC-CCCCCeeeEEEEEECCCCcCCCcccC-CcEEEEEEeCeEEEEEC------CE--EEEEeCCCEEEE
Confidence 3455666665432 11233578888999999999999998 67999999999987752 33 589999999999
Q ss_pred cCCCeeEEEeCC-CCcEEEEEEE
Q 048097 155 PIGLIHFQVNIG-KTSAVAFAGF 176 (224)
Q Consensus 155 P~G~~H~~~N~G-~~~a~~l~~~ 176 (224)
|+|..|.+.|.| +++++++++.
T Consensus 345 P~g~~H~~~N~g~~e~~~ll~i~ 367 (394)
T 3bu7_A 345 PAWTWHEHCNTQERDDACLFSFN 367 (394)
T ss_dssp CTTCCEEEEECCSSCCEEEEEEE
T ss_pred CCCCeEEeEeCCCCCCeEEEEee
Confidence 999999999999 7899888764
No 92
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=98.94 E-value=3.2e-09 Score=89.49 Aligned_cols=73 Identities=7% Similarity=-0.068 Sum_probs=63.7
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEE
Q 048097 94 GTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAF 173 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l 173 (224)
+..+.++.++||..+++|.|| ..|++||++|++++.+.+ + +..|++||++++|+|.+|...|. ++++++
T Consensus 36 ~~~~~~~~~~~G~~~~~h~h~-~~~~~~Vl~G~~~~~i~~------~--~~~l~~Gd~~~~p~~~~H~~~a~--~~~~~l 104 (227)
T 3rns_A 36 NSYISLFSLAKDEEITAEAML-GNRYYYCFNGNGEIFIEN------N--KKTISNGDFLEITANHNYSIEAR--DNLKLI 104 (227)
T ss_dssp SEEEEEEEECTTCEEEECSCS-SCEEEEEEESEEEEEESS------C--EEEEETTEEEEECSSCCEEEEES--SSEEEE
T ss_pred CcEEEEEEECCCCccCccccC-CCEEEEEEeCEEEEEECC------E--EEEECCCCEEEECCCCCEEEEEC--CCcEEE
Confidence 678899999999999999998 699999999999998742 2 48999999999999999999985 467787
Q ss_pred EEEe
Q 048097 174 AGFS 177 (224)
Q Consensus 174 ~~~~ 177 (224)
.++.
T Consensus 105 ~i~~ 108 (227)
T 3rns_A 105 EIGE 108 (227)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7654
No 93
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=98.94 E-value=4.7e-09 Score=91.43 Aligned_cols=82 Identities=13% Similarity=-0.027 Sum_probs=69.2
Q ss_pred CcccccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCC
Q 048097 88 PGLNTLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGK 167 (224)
Q Consensus 88 p~L~~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~ 167 (224)
|.-....+.+.+++++||+.++.|-|..-+|.+|||+|++.+.+. ++ +..|++||+++++.+..|+++|.|+
T Consensus 184 p~~~~~~~~~~~~~l~pG~~i~~~~~h~~e~~~~il~G~~~~~~~------~~--~~~v~~GD~~~~~~~~~h~~~n~g~ 255 (278)
T 1sq4_A 184 MSDMRHDMHVNIVNFEPGGVIPFAETHVMEHGLYVLEGKAVYRLN------QD--WVEVEAGDFMWLRAFCPQACYSGGP 255 (278)
T ss_dssp TTCTTCSEEEEEEEECSSSEESCCCCCSEEEEEEEEECEEEEEET------TE--EEEEETTCEEEEEESCCEEEECCSS
T ss_pred CCCcCCCeEEEEEEECCCCCcCCCCCCCccEEEEEEeCEEEEEEC------CE--EEEeCCCCEEEECCCCCEEEEcCCC
Confidence 333456899999999999999974333468999999999999763 33 5899999999999999999999999
Q ss_pred CcEEEEEEEe
Q 048097 168 TSAVAFAGFS 177 (224)
Q Consensus 168 ~~a~~l~~~~ 177 (224)
++++++.+.+
T Consensus 256 ~~~~yl~~~d 265 (278)
T 1sq4_A 256 GRFRYLLYKD 265 (278)
T ss_dssp SCEEEEEEEE
T ss_pred CCEEEEEEEE
Confidence 9999998775
No 94
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=98.93 E-value=2.8e-08 Score=86.38 Aligned_cols=85 Identities=16% Similarity=0.159 Sum_probs=70.5
Q ss_pred eeEEEccccccCcccccceEEEEEEEcCCCcCCC-ccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEc
Q 048097 77 FNVTNANVEQIPGLNTLGTSAVRIDYAPYGQNPP-HTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFP 155 (224)
Q Consensus 77 ~~v~~~~~~~~p~L~~lgis~~~v~l~pgg~~pp-H~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P 155 (224)
...+.+..++. ..++.+.+++++||+.+|. |.|. .+|.+|||+|++.+.+. ++ .+.+++||+++++
T Consensus 172 ~~~r~l~p~~~----~~d~~~~~~t~~PG~~~p~~e~H~-~eh~~~vL~G~g~y~l~------~~--~~~V~~GD~i~~~ 238 (266)
T 4e2q_A 172 FELRKLLPMSV----AYDFNIHTMDFQPGEFLNVKEVHY-NQHGLLLLEGQGIYRLG------DN--WYPVQAGDVIWMA 238 (266)
T ss_dssp SEEEESSCCST----TCSEEEEEEEECTTCBCSSCCCCS-CCEEEEEEECEEEEEET------TE--EEEEETTCEEEEC
T ss_pred EEEEEccCccc----ccceEEEEEEECCCcCcCCceEcc-cceEEEEEeceEEEEEC------CE--EEEecCCCEEEEC
Confidence 33444444442 4578999999999999996 7776 68999999999999863 33 5899999999999
Q ss_pred CCCeeEEEeCCCCcEEEEE
Q 048097 156 IGLIHFQVNIGKTSAVAFA 174 (224)
Q Consensus 156 ~G~~H~~~N~G~~~a~~l~ 174 (224)
++.+|++.|.|++++.+|.
T Consensus 239 ~~~~h~~~n~G~e~~~yl~ 257 (266)
T 4e2q_A 239 PFVPQWYAALGKTRSRYLL 257 (266)
T ss_dssp TTCCEEEEEESSSCEEEEE
T ss_pred CCCcEEEEeCCCCCEEEEE
Confidence 9999999999999998874
No 95
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=98.86 E-value=3.4e-08 Score=81.89 Aligned_cols=84 Identities=24% Similarity=0.205 Sum_probs=66.5
Q ss_pred EEEEEEEcCCC----------cCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeC
Q 048097 96 SAVRIDYAPYG----------QNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNI 165 (224)
Q Consensus 96 s~~~v~l~pgg----------~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~ 165 (224)
+...+.+.|+. ..++|+|+. .|++||++|++++.+.+.+ ++.+...+++||++++|+|..|+..+.
T Consensus 75 ~~D~v~~~p~~~p~~~~k~~~~~~~H~H~~-~Ei~yVleG~G~f~i~d~~---d~~~~i~v~~GDlIiIPaG~~H~f~~~ 150 (191)
T 1vr3_A 75 WMDIITICKDTLPNYEEKIKMFFEEHLHLD-EEIRYILEGSGYFDVRDKE---DKWIRISMEKGDMITLPAGIYHRFTLD 150 (191)
T ss_dssp EEEEEEESTTTSTTHHHHHHHHHSCEECSS-CEEEEEEEEEEEEEEECTT---SCEEEEEEETTEEEEECTTCCEEEEEC
T ss_pred ceeEEEECCCcCcchhhhhccCCcceECCc-ceEEEEEeceEEEEECCCC---CeEEEEEECCCCEEEECcCCcCCcccC
Confidence 55556677765 248999985 8999999999999987653 455567999999999999999999887
Q ss_pred CCCcEEEEEEEeCCCCcee
Q 048097 166 GKTSAVAFAGFSSQFPGVI 184 (224)
Q Consensus 166 G~~~a~~l~~~~s~~pg~~ 184 (224)
.+...+++-.|. ..|+..
T Consensus 151 ~~~~~~airlF~-~~~~W~ 168 (191)
T 1vr3_A 151 EKNYVKAMRLFV-GEPVWT 168 (191)
T ss_dssp TTCCEEEEEEES-SSCCCC
T ss_pred CCCCEEEEEEEC-CCCCcc
Confidence 777777877675 445544
No 96
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=98.85 E-value=6.5e-09 Score=83.22 Aligned_cols=73 Identities=14% Similarity=-0.012 Sum_probs=58.1
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEE
Q 048097 94 GTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAF 173 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l 173 (224)
.+++..++++ ++. .|||...+|+.||++|++++.+ + ++ ...|++||+++||+|..|.+.|. ++++++
T Consensus 65 ~~s~g~~~~e-~~~--~~~~~~~eE~~yVLeG~~~l~i-~-----g~--~~~l~~GD~i~iP~G~~h~~~n~--~~a~~l 131 (151)
T 4axo_A 65 RLGCGMMEMK-ETT--FDWTLNYDEIDYVIDGTLDIII-D-----GR--KVSASSGELIFIPKGSKIQFSVP--DYARFI 131 (151)
T ss_dssp SCEEEEEEEE-EEE--EEEECSSEEEEEEEEEEEEEEE-T-----TE--EEEEETTCEEEECTTCEEEEEEE--EEEEEE
T ss_pred cEEEEEEEEc-Ccc--ccEeCCCcEEEEEEEeEEEEEE-C-----CE--EEEEcCCCEEEECCCCEEEEEeC--CCEEEE
Confidence 4666666676 443 5677778999999999999986 2 34 58999999999999999999997 678887
Q ss_pred EEEeCC
Q 048097 174 AGFSSQ 179 (224)
Q Consensus 174 ~~~~s~ 179 (224)
++....
T Consensus 132 ~V~~P~ 137 (151)
T 4axo_A 132 YVTYPA 137 (151)
T ss_dssp EEEECS
T ss_pred EEECCC
Confidence 776543
No 97
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=98.73 E-value=8.6e-08 Score=70.67 Aligned_cols=75 Identities=16% Similarity=0.128 Sum_probs=62.9
Q ss_pred eeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEEEE-EeCCCCceeechh---hhhcCCCCCCHHHHHhhcCCCHHHHHH
Q 048097 140 TLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAFAG-FSSQFPGVITIAD---TVFGANPPINPDFLGKAFQLDPKIVKD 215 (224)
Q Consensus 140 k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l~~-~~s~~pg~~~~~~---~lf~~~p~~p~~vLa~af~~~~~~v~~ 215 (224)
+.+...|++||+++||+|.+-.+.+.. ...+++. .+.+++....++. +++. .+|.++|+.+|+++.+++++
T Consensus 4 ~~~~~~l~~G~v~vVPq~~~v~~~A~~--~le~v~F~tna~~~~~~~LAG~~~Svl~---~l~~evla~aF~~s~ee~~~ 78 (93)
T 1dgw_Y 4 RRYAATLSEGDIIVIPSSFPVALKAAS--DLNMVGIGVNAENNERNFLAGHKENVIR---QIPRQVSDLTFPGSGEEVEE 78 (93)
T ss_dssp EEEEEEECTTCEEEECTTCCEEEEESS--SEEEEEEEESCTTCCEEESSSSTTBSTT---TSCHHHHHHHSSSCTHHHHH
T ss_pred chhhceecCCcEEEECCCCceeEEecC--CeEEEEEEecCCCCeeeeccCCcccHHH---hCCHHHHHHHcCCCHHHHHH
Confidence 345679999999999999999999874 3777765 3455888888864 8888 49999999999999999999
Q ss_pred hhhh
Q 048097 216 LQDK 219 (224)
Q Consensus 216 l~~~ 219 (224)
|+..
T Consensus 79 l~~~ 82 (93)
T 1dgw_Y 79 LLEN 82 (93)
T ss_dssp HTTS
T ss_pred HHhc
Confidence 9864
No 98
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=98.73 E-value=4.5e-08 Score=81.12 Aligned_cols=71 Identities=20% Similarity=0.202 Sum_probs=60.4
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEE
Q 048097 94 GTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAF 173 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l 173 (224)
+..+..+.++||+.+|.|+|+ ..|++||++|+.. ++. .++.+||.+++|+|..|...+.+.+.++++
T Consensus 124 ~~~v~l~~~~pG~~~p~H~H~-g~E~~~VL~G~f~----de~--------~~~~~Gd~~~~p~g~~H~p~a~~~~gc~~l 190 (195)
T 2q1z_B 124 EAIARLLWIPGGQAVPDHGHR-GLELTLVLQGAFR----DET--------DRFGAGDIEIADQELEHTPVAERGLDCICL 190 (195)
T ss_dssp SSEEEEEEECTTCBCCCCCCS-SCEEEEEEESEEE----CSS--------SEEETTCEEEECSSCCCCCEECSSSCEEEE
T ss_pred CcEEEEEEECCCCCCCCcCCC-CeEEEEEEEEEEE----CCc--------EEECCCeEEEeCcCCccCCEeCCCCCEEEE
Confidence 346678999999999999997 7899999999954 332 478999999999999999998777888888
Q ss_pred EEEe
Q 048097 174 AGFS 177 (224)
Q Consensus 174 ~~~~ 177 (224)
++.+
T Consensus 191 ~~~d 194 (195)
T 2q1z_B 191 AATD 194 (195)
T ss_dssp EEEC
T ss_pred EEec
Confidence 7764
No 99
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=98.72 E-value=4.2e-08 Score=78.95 Aligned_cols=73 Identities=16% Similarity=0.193 Sum_probs=61.6
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeC--CCCcEE
Q 048097 94 GTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNI--GKTSAV 171 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~--G~~~a~ 171 (224)
|..+.+++++||+.+++|.|+ ..|.+|||+|++.+. +. + ..+++||.++.|+|..|...+. +++.++
T Consensus 41 g~~v~lvr~~pG~~~p~H~H~-g~ee~~VL~G~~~~~---e~---~----~~~~~Gd~~~~P~g~~H~~~~~~~~~e~~~ 109 (159)
T 3ebr_A 41 GETITLLKAPAGMEMPRHHHT-GTVIVYTVQGSWRYK---EH---D----WVAHAGSVVYETASTRHTPQSAYAEGPDII 109 (159)
T ss_dssp TEEEEEEEECSSCBCCCEEES-SCEEEEEEESCEEET---TS---S----CCBCTTCEEEECSSEEECEEESSSSSSCEE
T ss_pred CeEEEEEEECCCCCcccccCC-CCEEEEEEEeEEEEe---CC---C----eEECCCeEEEECCCCcceeEeCCCCCCCEE
Confidence 567888999999999999998 588899999998752 22 2 4789999999999999999998 778888
Q ss_pred EEEEEe
Q 048097 172 AFAGFS 177 (224)
Q Consensus 172 ~l~~~~ 177 (224)
++.+..
T Consensus 110 ~~~~~~ 115 (159)
T 3ebr_A 110 TFNIVA 115 (159)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 777544
No 100
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=98.69 E-value=3.4e-08 Score=84.30 Aligned_cols=71 Identities=17% Similarity=0.098 Sum_probs=60.6
Q ss_pred cceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEE
Q 048097 93 LGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVA 172 (224)
Q Consensus 93 lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~ 172 (224)
..+.+.+++++||+....|. ..|++||++|++++.+. ++ .+.|++||.++||++..|.+.|. +++.+
T Consensus 48 ~~~~~~~~~l~Pg~~~~~~~---~ee~~~Vl~G~~~~~~~------~~--~~~l~~Gd~~~~p~~~~H~~~n~--~~~~~ 114 (246)
T 1sfn_A 48 ARFVQFTAEMPAGAQATESV---YQRFAFVLSGEVDVAVG------GE--TRTLREYDYVYLPAGEKHMLTAK--TDARV 114 (246)
T ss_dssp CSSEEEEEEECTTCEEECCS---SEEEEEEEEEEEEEECS------SC--EEEECTTEEEEECTTCCCEEEEE--EEEEE
T ss_pred CcEEEEEEEECCCCcCCCCc---eeEEEEEEECEEEEEEC------CE--EEEECCCCEEEECCCCCEEEEeC--CCEEE
Confidence 36789999999999887774 78999999999999864 23 48999999999999999999998 67777
Q ss_pred EEEE
Q 048097 173 FAGF 176 (224)
Q Consensus 173 l~~~ 176 (224)
+.+.
T Consensus 115 l~v~ 118 (246)
T 1sfn_A 115 SVFE 118 (246)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7665
No 101
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.68 E-value=1.2e-07 Score=84.93 Aligned_cols=83 Identities=18% Similarity=0.115 Sum_probs=66.1
Q ss_pred ccCcccccceEEEEEEEcC---CCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEE
Q 048097 86 QIPGLNTLGTSAVRIDYAP---YGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQ 162 (224)
Q Consensus 86 ~~p~L~~lgis~~~v~l~p---gg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~ 162 (224)
+.+..+.+.+++.++++.+ |+.++.|.|+ ..|++||++|++++.+.+. + ...|++||++++|+|.+|.+
T Consensus 240 ~~~~~~~~~f~~~~i~~~~~~~g~~~~~h~~~-~~~~~~vleG~~~i~i~g~-----~--~~~l~~Gd~~~iPag~~h~~ 311 (350)
T 1juh_A 240 TATQAQDTNYTLSTISMSTTPSTVTVPTWSFP-GACAFQVQEGRVVVQIGDY-----A--ATELGSGDVAFIPGGVEFKY 311 (350)
T ss_dssp CHHHHGGGCEEEEEEEECCCCTTSCCCCBCCS-SCEEEEEEESCEEEEETTS-----C--CEEECTTCEEEECTTCCEEE
T ss_pred eCCcCceeEEEEEEEeeccccCCCCCCcccCC-CcEEEEEEeeEEEEEECCe-----E--EEEeCCCCEEEECCCCCEEE
Confidence 3344455568999999988 4578999997 6999999999999998641 2 37999999999999999999
Q ss_pred EeCCCCcEEEEEEEe
Q 048097 163 VNIGKTSAVAFAGFS 177 (224)
Q Consensus 163 ~N~G~~~a~~l~~~~ 177 (224)
.|.++. +.++.+.+
T Consensus 312 ~~~~~~-~~~l~~~~ 325 (350)
T 1juh_A 312 YSEAYF-SKVLFVSS 325 (350)
T ss_dssp EESSSS-EEEEEEEE
T ss_pred EecCCe-EEEEEEec
Confidence 998665 66665554
No 102
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=98.66 E-value=3.8e-08 Score=73.29 Aligned_cols=62 Identities=21% Similarity=0.145 Sum_probs=49.2
Q ss_pred EEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcE
Q 048097 99 RIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSA 170 (224)
Q Consensus 99 ~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a 170 (224)
+.+++||.. +.| |+ ..|++||++|++++.+.+ ++ ...|++||+++||+|.+|.+.|.++...
T Consensus 35 ~~~~~pg~~-~~h-H~-~~E~~~Vl~G~~~~~i~~-----g~--~~~l~~GD~i~ip~g~~H~~~n~~~~~~ 96 (101)
T 1o5u_A 35 IWEKEVSEF-DWY-YD-TNETCYILEGKVEVTTED-----GK--KYVIEKGDLVTFPKGLRCRWKVLEPVRK 96 (101)
T ss_dssp EEEECSEEE-EEE-CS-SCEEEEEEEEEEEEEETT-----CC--EEEEETTCEEEECTTCEEEEEEEEEEEE
T ss_pred EEEeCCCcc-ccc-CC-ceEEEEEEeCEEEEEECC-----CC--EEEECCCCEEEECCCCcEEEEeCCCeeE
Confidence 567778764 345 65 799999999999998741 12 4899999999999999999999776543
No 103
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=98.63 E-value=1.8e-08 Score=82.70 Aligned_cols=70 Identities=19% Similarity=0.185 Sum_probs=55.7
Q ss_pred CCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEEEEEeCCCCce
Q 048097 108 NPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAFAGFSSQFPGV 183 (224)
Q Consensus 108 ~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l~~~~s~~pg~ 183 (224)
.++|+|+. .|+.||++|++++.+. .+ ++.+...+++||++++|+|..|+..+..+...+++-.|.. .|+.
T Consensus 93 ~~~H~H~~-~Ei~~Vl~G~g~~~i~-~~---d~~~~~~l~~GDli~IP~g~~H~~~~~~~~~~~~ir~F~~-~~~w 162 (179)
T 1zrr_A 93 LNEHTHGE-DEVRFFVEGAGLFCLH-IG---DEVFQVLCEKNDLISVPAHTPHWFDMGSEPNFTAIRIFDN-PEGW 162 (179)
T ss_dssp HSCBEESS-CEEEEEEESCCCCCEE-CS---SCEEEEECCCSCEEEECTTCCBCCCCSSCSSCEEEEEECC-GGGE
T ss_pred ccceECCh-heEEEEEcceEEEEEE-eC---CEEEEEEECCCCEEEECCCCeEeeecCCCceEEEEEeccC-CCCc
Confidence 57899985 8999999999999775 22 5656678999999999999999988766656777766653 3554
No 104
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=98.60 E-value=6.8e-08 Score=74.51 Aligned_cols=67 Identities=15% Similarity=0.091 Sum_probs=54.0
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCc
Q 048097 94 GTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTS 169 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~ 169 (224)
.+++...++.||... .|+|. ..|++||++|++++.+.+ ++ ...|++||+++||+|..|.+.|.+...
T Consensus 48 ~~~~g~w~~~pG~~~-~~~~~-~~E~~~Vl~G~~~l~~~~-----g~--~~~l~~GD~~~ip~g~~h~~~~~~~~r 114 (123)
T 3bcw_A 48 KVESGVWESTSGSFQ-SNTTG-YIEYCHIIEGEARLVDPD-----GT--VHAVKAGDAFIMPEGYTGRWEVDRHVK 114 (123)
T ss_dssp TEEEEEEEEEEEEEE-CCCTT-EEEEEEEEEEEEEEECTT-----CC--EEEEETTCEEEECTTCCCEEEEEEEEE
T ss_pred CEEEEEEEECCCcee-eEcCC-CcEEEEEEEEEEEEEECC-----Ce--EEEECCCCEEEECCCCeEEEEECCcee
Confidence 478888899998654 46664 389999999999998522 23 478999999999999999999986543
No 105
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=98.59 E-value=1.4e-07 Score=76.38 Aligned_cols=74 Identities=22% Similarity=0.198 Sum_probs=59.0
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCC--CCcEE
Q 048097 94 GTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIG--KTSAV 171 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G--~~~a~ 171 (224)
|..+.+++++||+.+|+|+|+ ..|.+|||+|++... .. .. ..+++||.++.|+|..|...+.. +++++
T Consensus 42 g~~v~lvr~~pG~~~p~H~H~-g~ee~~VL~G~f~~~---~~---~~---~~~~aGd~~~~P~g~~H~~~a~~~~~~gci 111 (165)
T 3cjx_A 42 GLMVMRASFAPGLTLPLHFHT-GTVHMYTISGCWYYT---EY---PG---QKQTAGCYLYEPGGSIHQFNTPRDNEGQTE 111 (165)
T ss_dssp TEEEEEEEECTTCBCCEEEES-SCEEEEEEESEEEET---TC---TT---SCEETTEEEEECTTCEECEECCTTCSSCEE
T ss_pred CcEEEEEEECCCCcCCcccCC-CCEEEEEEEEEEEEC---CC---ce---EEECCCeEEEeCCCCceeeEeCCCCCCCcE
Confidence 567889999999999999998 589999999999762 11 12 46899999999999999998864 33675
Q ss_pred EEEEEe
Q 048097 172 AFAGFS 177 (224)
Q Consensus 172 ~l~~~~ 177 (224)
.+.+..
T Consensus 112 ~l~v~~ 117 (165)
T 3cjx_A 112 VIFMLS 117 (165)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 555443
No 106
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=98.58 E-value=3.3e-07 Score=74.94 Aligned_cols=85 Identities=18% Similarity=0.217 Sum_probs=63.5
Q ss_pred eEEEEEEEcCCCcCCCccCCC------CcEEEEEEecEEEEEEEeCCCCC-------Ce------eEEEEecCCCEEEEc
Q 048097 95 TSAVRIDYAPYGQNPPHTHPR------ATEILVVLEGTLYVGFVTSNQLN-------NT------LIAKVLNKGDVFVFP 155 (224)
Q Consensus 95 is~~~v~l~pgg~~ppH~Hp~------a~Ei~~Vl~G~~~v~~v~~~~~~-------~k------~~~~~l~~GDv~v~P 155 (224)
...-++.+.||...|.|.|+. -.|-++|+.|++++.+.+..... ++ --...|++||.+.+|
T Consensus 53 Y~~K~l~l~pGQ~~P~H~H~~~~~~~gK~E~~ivr~G~v~l~~~g~~~~~~~v~v~dg~~~~~~a~~~i~L~pGesvtIp 132 (175)
T 2y0o_A 53 YCSKELVLFPGQTCPEHRHPPVDGQEGKQETFRCRYGKVYLYVEGEKTPLPKVLPPQEDREHYTVWHEIELEPGGQYTIP 132 (175)
T ss_dssp EEEEEEEECTTCEEEEEECCCCTTSCCCCEEEEEEEEEEEEEESSSCCSSCSCCCCGGGGGGCCCCEEEEECTTCEEEEC
T ss_pred ceEEEEEECCCCcCCceECCCCCCCCCCceeEEEecCEEEEEECCccccCcceeccCCceeeecCCcEEEECCCCEEEEC
Confidence 677889999999999999998 88999999999988763211000 00 023589999999999
Q ss_pred CCCeeEEEeCCCCcEEEEEEEeCCCC
Q 048097 156 IGLIHFQVNIGKTSAVAFAGFSSQFP 181 (224)
Q Consensus 156 ~G~~H~~~N~G~~~a~~l~~~~s~~p 181 (224)
+|..|+++| |.+. +++.-+++.+-
T Consensus 133 pg~~H~f~a-geeg-vli~EvSt~~d 156 (175)
T 2y0o_A 133 PNTKHWFQA-GEEG-AVVTEMSSTST 156 (175)
T ss_dssp TTCCEEEEE-EEEE-EEEEEEEECCC
T ss_pred CCCcEEEEe-CCCC-EEEEEEeCCCC
Confidence 999999999 3333 55566665543
No 107
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=98.58 E-value=5.7e-08 Score=76.71 Aligned_cols=77 Identities=10% Similarity=-0.037 Sum_probs=58.0
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeE-EEeCCCCcEEE
Q 048097 94 GTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHF-QVNIGKTSAVA 172 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~-~~N~G~~~a~~ 172 (224)
|-.+.+++++||+.+++|+|+. .|.+|||+|+++.... .......+++||.+++|+|..|. ..+ .+.+++
T Consensus 43 g~~~~~~~~~pG~~~p~H~H~~-~ee~~VL~G~~~~~~g------~~~~~~~~~~Gd~~~~p~g~~H~p~~~--~e~~~~ 113 (145)
T 2o1q_A 43 GSWTAIFDCPAGSSFAAHVHVG-PGEYFLTKGKMDVRGG------KAAGGDTAIAPGYGYESANARHDKTEF--PVASEF 113 (145)
T ss_dssp TEEEEEEEECTTEEECCEEESS-CEEEEEEEEEEEETTC------GGGTSEEEESSEEEEECTTCEESCCEE--EEEEEE
T ss_pred ccEEEEEEECCCCCCCccCCCC-CEEEEEEEeEEEEcCC------CEecceEeCCCEEEEECcCCccCCeEC--CCCeEE
Confidence 4467889999999999999984 6779999999985321 11002689999999999999999 443 344666
Q ss_pred EEEEeCC
Q 048097 173 FAGFSSQ 179 (224)
Q Consensus 173 l~~~~s~ 179 (224)
+.+++..
T Consensus 114 l~~~~gp 120 (145)
T 2o1q_A 114 YMSFLGP 120 (145)
T ss_dssp EEEEESC
T ss_pred EEEECCc
Confidence 7676544
No 108
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=98.55 E-value=1.4e-06 Score=70.89 Aligned_cols=86 Identities=21% Similarity=0.298 Sum_probs=72.1
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCe---eEEEEecCCCEEEEcCCCeeEEEeCCCCcE
Q 048097 94 GTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNT---LIAKVLNKGDVFVFPIGLIHFQVNIGKTSA 170 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k---~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a 170 (224)
++++..+...||...++|-|..+..++.|++|+++.......+ ++ .....+++||++++|++.+|.+.|.+++++
T Consensus 68 ~~~v~~l~W~PGq~S~iHdH~~s~~~~~VL~G~l~e~~y~~~~--~~~~~~~~~~l~~G~~~~~~~~~iH~V~N~~~~~a 145 (171)
T 3eqe_A 68 ELEIIVINIPPNKETTVHDHGQSIGCAMVLEGKLLNSIYRSTG--EHAELSNSYFVHEGECLISTKGLIHKMSNPTSERM 145 (171)
T ss_dssp SCEEEEEEECTTCBCCEECCTTCEEEEEEEESEEEEEEEEECS--SSEEEEEEEEEETTCEEEECTTCEEEEECCSSSCE
T ss_pred CeEEEEEEECCCCCcccccCCCceEEEEEEeeeEEEEEeecCC--CceeecceEEeCCCcEEEeCCCCEEEEECCCCCCE
Confidence 5688999999999999999998889999999999987653221 21 235789999999999999999999999999
Q ss_pred EEEEEEeCCCC
Q 048097 171 VAFAGFSSQFP 181 (224)
Q Consensus 171 ~~l~~~~s~~p 181 (224)
+-+-++..+..
T Consensus 146 VSlHvY~pp~~ 156 (171)
T 3eqe_A 146 VSLHVYSPPLE 156 (171)
T ss_dssp EEEEEEESCCC
T ss_pred EEEEEeCCCcc
Confidence 99988875543
No 109
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=98.45 E-value=1.3e-06 Score=77.14 Aligned_cols=77 Identities=22% Similarity=0.246 Sum_probs=62.9
Q ss_pred EEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecC-C---CEEEEcCCCeeEEEeCCCCcEE
Q 048097 96 SAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNK-G---DVFVFPIGLIHFQVNIGKTSAV 171 (224)
Q Consensus 96 s~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~-G---Dv~v~P~G~~H~~~N~G~~~a~ 171 (224)
........||.....|||....|.++|++|++.+.+.+... ++. ..+.. | +++++|+|..|.+.|.|+++++
T Consensus 273 q~~ls~~~~g~~rg~h~h~~~~e~~~~~~G~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~ip~g~~h~~~n~~~~~~~ 348 (369)
T 3st7_A 273 QVSVNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVND--DEI--IEYYVSGDKLEVVDIPVGYTHNIENLGDTDMV 348 (369)
T ss_dssp EEEEEEECTTCEEEEEECSSCCEEEEEEESEEEEEEEETTC--CCC--EEEEEETTBCCEEEECTTEEEEEEECSSSCEE
T ss_pred eEEEEEecCCceeccccccCcceEEEEEeeeEEEEEEcCCC--CcE--EEEEecCCcceEEEeCCCceEEeEEcCCCcEE
Confidence 34556789999999999999999999999999998775442 443 44444 6 9999999999999999988988
Q ss_pred EEEEE
Q 048097 172 AFAGF 176 (224)
Q Consensus 172 ~l~~~ 176 (224)
++..-
T Consensus 349 ~~~~~ 353 (369)
T 3st7_A 349 TIMWV 353 (369)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 87553
No 110
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=98.45 E-value=1.4e-06 Score=70.93 Aligned_cols=61 Identities=21% Similarity=0.316 Sum_probs=51.4
Q ss_pred EEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCC
Q 048097 101 DYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIG 166 (224)
Q Consensus 101 ~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G 166 (224)
.-.|++....|.|+ .+|++||++|++++.+.+. ++.....|++||++++|+|..|.-.-.+
T Consensus 41 v~Gpn~r~d~H~h~-~dE~FyvlkG~m~i~v~d~----g~~~~v~l~eGE~f~lP~gvpH~P~r~~ 101 (174)
T 1yfu_A 41 VGGPNHRTDYHDDP-LEEFFYQLRGNAYLNLWVD----GRRERADLKEGDIFLLPPHVRHSPQRPE 101 (174)
T ss_dssp ECSCBCCCCEEECS-SCEEEEEEESCEEEEEEET----TEEEEEEECTTCEEEECTTCCEEEEBCC
T ss_pred EcCCCcCccCcCCC-CceEEEEEeeEEEEEEEcC----CceeeEEECCCCEEEeCCCCCcCccccC
Confidence 34677789999886 7999999999999998874 3444689999999999999999986654
No 111
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=98.42 E-value=1.7e-06 Score=78.25 Aligned_cols=87 Identities=18% Similarity=0.110 Sum_probs=69.3
Q ss_pred Cee-EEEccccc-cCcccccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEE
Q 048097 76 GFN-VTNANVEQ-IPGLNTLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFV 153 (224)
Q Consensus 76 g~~-v~~~~~~~-~p~L~~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v 153 (224)
|.. +..++..+ =+.+.+ |++....|.||...++|-|. ++++++|++|++++.+. ++ ++..++||+|+
T Consensus 260 g~~~~~y~NP~tg~~~~pt--i~~~~~~L~pG~~t~~hRht-~s~Vy~V~eG~G~~~I~------~~--~~~w~~gD~fv 328 (368)
T 3nw4_A 260 GHAAIRYVNPTTGGDVMPT--LRCEFHRLRAGTETATRNEV-GSTVFQVFEGAGAVVMN------GE--TTKLEKGDMFV 328 (368)
T ss_dssp TEEEEECBCTTTSSBSSSS--CEEEEEEECTTCBCCCEEES-SCEEEEEEESCEEEEET------TE--EEEECTTCEEE
T ss_pred ceEEEEEeCCCCCCCcchh--HHhheEEECCCCccCCeecc-ccEEEEEEeCcEEEEEC------CE--EEEecCCCEEE
Confidence 666 67777542 333444 56666779999999999997 68999999999999874 33 48999999999
Q ss_pred EcCCCeeEEEeCCCCcEEEEEE
Q 048097 154 FPIGLIHFQVNIGKTSAVAFAG 175 (224)
Q Consensus 154 ~P~G~~H~~~N~G~~~a~~l~~ 175 (224)
+|++..|...|. +++.+|++
T Consensus 329 vP~w~~h~~~n~--~~a~Lf~~ 348 (368)
T 3nw4_A 329 VPSWVPWSLQAE--TQFDLFRF 348 (368)
T ss_dssp ECTTCCEEEEES--SSEEEEEE
T ss_pred ECCCCcEEEEeC--CCEEEEEE
Confidence 999999999996 67877754
No 112
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=98.35 E-value=1.1e-06 Score=69.06 Aligned_cols=73 Identities=11% Similarity=0.123 Sum_probs=53.9
Q ss_pred cCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEEEEEe
Q 048097 103 APYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAFAGFS 177 (224)
Q Consensus 103 ~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l~~~~ 177 (224)
.++++...|.|++.+|+++|++|++++.+-+......+.....|++|+++++|+|..|...-. +.+.++.+=.
T Consensus 37 ~~~~i~~~h~H~~tDE~Fivl~G~l~i~~rd~~~~~~~d~~V~l~~Ge~yvVPkGveH~p~a~--~e~~vLLiEp 109 (140)
T 3d0j_A 37 DIEGIAHLEIHHSTDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYNVPAECWFYSITQ--KDTKMMYVQD 109 (140)
T ss_dssp BTTTCCEEEEESSCCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEEECTTCEEEEEEC--TTCEEEEEEE
T ss_pred CcccCHhhccCCCCCeEEEEEecEEEEEEecCcCCCCccceEEecCCCEEEeCCCccCcccCC--CceEEEEEEe
Confidence 345678899999999999999999999887421000123357899999999999999998764 3445554433
No 113
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=98.33 E-value=3e-06 Score=71.68 Aligned_cols=70 Identities=20% Similarity=0.270 Sum_probs=58.0
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEE
Q 048097 94 GTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAF 173 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l 173 (224)
+....+++++||+.+|+|+|+ ..|.+|||+|++. +.. ..+.+||.++.|+|..|.... .+.++++
T Consensus 42 g~~~~lvr~~pG~~~p~H~H~-g~Ee~~VL~G~f~----d~~--------~~~~~Gd~~~~P~g~~H~p~a--~~gc~~~ 106 (223)
T 3o14_A 42 ARATSIVRYAPGSRFSAHTHD-GGEEFIVLDGVFQ----DEH--------GDYPAGTYVRNPPTTSHVPGS--AEGCTIF 106 (223)
T ss_dssp CEEEEEEEECTTEECCCEECT-TCEEEEEEEEEEE----ETT--------EEEETTEEEEECTTCEECCEE--SSCEEEE
T ss_pred ccEEEEEEECCCCCcccccCC-CCEEEEEEEeEEE----ECC--------eEECCCeEEEeCCCCccccEe--CCCCEEE
Confidence 446778999999999999998 6899999999975 332 589999999999999999875 5567787
Q ss_pred EEEeC
Q 048097 174 AGFSS 178 (224)
Q Consensus 174 ~~~~s 178 (224)
..+..
T Consensus 107 vk~~~ 111 (223)
T 3o14_A 107 VKLWQ 111 (223)
T ss_dssp EEESC
T ss_pred EEecC
Confidence 77653
No 114
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=98.33 E-value=5.8e-06 Score=69.16 Aligned_cols=84 Identities=19% Similarity=0.222 Sum_probs=68.1
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCee---EEEEecCCCEEEEcC--CCeeEEEeC-CC
Q 048097 94 GTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTL---IAKVLNKGDVFVFPI--GLIHFQVNI-GK 167 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~---~~~~l~~GDv~v~P~--G~~H~~~N~-G~ 167 (224)
.+++..+...||...|+|-|.. ..+++|++|+++..+..-..++..+ ...++++||+++++. |.+|.+.|. ++
T Consensus 78 ~~~v~~l~w~PGq~spiHdH~~-~~~~~VL~G~l~e~~y~~~~~g~~l~~~~~~~l~~G~v~~~~~~~g~iH~V~N~~~~ 156 (208)
T 2gm6_A 78 RFSIVSFVWGPGQRTPIHDHTV-WGLIGMLRGAEYSQPFVLDGSGRPVLHGEPTRLEPGHVEAVSPTVGDIHRVHNAYDD 156 (208)
T ss_dssp SCEEEEEEECTTCBCCSBCCSS-CEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSS
T ss_pred CEEEEEEEeCCCcccCcccCCc-ceEEEEecccEEEEEeecCCCCccccccceEEeCCCCEEEECCCCCCeEEeccCCCC
Confidence 4688889999999999999985 9999999999988765421100111 147899999999999 999999999 68
Q ss_pred CcEEEEEEEeC
Q 048097 168 TSAVAFAGFSS 178 (224)
Q Consensus 168 ~~a~~l~~~~s 178 (224)
++++.|-++..
T Consensus 157 ~~avsLHvY~~ 167 (208)
T 2gm6_A 157 RVSISIHVYGA 167 (208)
T ss_dssp SCEEEEEEESS
T ss_pred CcEEEEEEEcC
Confidence 89999988754
No 115
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=98.28 E-value=1.1e-06 Score=70.42 Aligned_cols=64 Identities=9% Similarity=-0.036 Sum_probs=52.6
Q ss_pred cceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEE
Q 048097 93 LGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQV 163 (224)
Q Consensus 93 lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~ 163 (224)
.|-...+++++||+.+++|+|+ ..|.+|||+|++..+..+ ......+++|+.++.|+|..|...
T Consensus 44 ~g~~t~lvr~~pG~~~p~H~H~-g~ee~~VL~G~~~~~~Gd------~~~~~~~~aGsYv~ePpGs~H~p~ 107 (153)
T 3bal_A 44 TSSWTAIFNCPAGSSFASHIHA-GPGEYFLTKGKMEVRGGE------QEGGSTAYAPSYGFESSGALHGKT 107 (153)
T ss_dssp TTEEEEEEEECTTEEECCEEES-SCEEEEEEESEEEETTCG------GGTSEEEESSEEEEECTTCEESCC
T ss_pred cceEEEEEEeCCCCCccCccCC-CCEEEEEEEEEEEecCcc------ccCccccCCCeEEEcCCCCcccce
Confidence 4778899999999999999999 578899999999774321 111367899999999999999853
No 116
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=98.18 E-value=1.3e-05 Score=65.13 Aligned_cols=62 Identities=21% Similarity=0.426 Sum_probs=48.8
Q ss_pred cCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeC
Q 048097 103 APYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNI 165 (224)
Q Consensus 103 ~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~ 165 (224)
.|+...-.|.|+ ..|++|+++|++.+.+.+....+.+.....|++||++++|+|.+|.-.-.
T Consensus 42 GPn~r~D~H~~~-~eE~Fy~lkG~m~l~v~d~g~~~~~~~dv~i~eGdmfllP~gvpHsP~r~ 103 (176)
T 1zvf_A 42 GPNERTDYHINP-TPEWFYQKKGSMLLKVVDETDAEPKFIDIIINEGDSYLLPGNVPHSPVRF 103 (176)
T ss_dssp SSBCCSCEEECS-SCEEEEEEESCEEEEEEECSSSSCEEEEEEECTTEEEEECTTCCEEEEEC
T ss_pred CCCcCCcCcCCC-CceEEEEEeCEEEEEEEcCCCcccceeeEEECCCCEEEcCCCCCcCCccc
Confidence 455778999665 79999999999999998732000144568999999999999999998654
No 117
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=98.16 E-value=9.7e-06 Score=62.96 Aligned_cols=58 Identities=19% Similarity=0.125 Sum_probs=47.0
Q ss_pred CCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCC-CcEEEEEE
Q 048097 109 PPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGK-TSAVAFAG 175 (224)
Q Consensus 109 ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~-~~a~~l~~ 175 (224)
.||.|+ .-|++||++|++++.+. ++ .+.+++||++++|+|.+|...+.++ ++...+.+
T Consensus 32 ~p~~h~-~~~i~~v~~G~~~~~i~------~~--~~~l~~Gd~~~i~p~~~H~~~~~~~~~~~~~~~i 90 (164)
T 2arc_A 32 RPLGMK-GYILNLTIRGQGVVKNQ------GR--EFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWV 90 (164)
T ss_dssp ETTCCS-SEEEEEEEEECEEEEET------TE--EEEECTTCEEEECTTCCEEEEECTTSSEEEEEEE
T ss_pred cccCCC-ceEEEEEEEeEEEEEEC------CE--EEEecCCeEEEEcCCCCEEEEeCCCCCcEEEEEE
Confidence 489996 68999999999999863 33 5899999999999999999888763 55554443
No 118
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=98.13 E-value=4.4e-05 Score=63.43 Aligned_cols=89 Identities=16% Similarity=0.142 Sum_probs=71.3
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCC-CCe---eEEEEecCCCEEEE-cCCCeeEEEeCC-C
Q 048097 94 GTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQL-NNT---LIAKVLNKGDVFVF-PIGLIHFQVNIG-K 167 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~-~~k---~~~~~l~~GDv~v~-P~G~~H~~~N~G-~ 167 (224)
.+++..+...||...++|-|..+..++.|++|+++.....-... ..+ .-..++++||+.++ |++.+|.+.|.+ +
T Consensus 69 ~~~l~ll~W~PGq~SpiHDH~~s~g~i~VL~G~l~e~~y~~~~~~~~~l~~~~~~~l~~G~v~~~~~~~giH~V~N~s~~ 148 (200)
T 3eln_A 69 KFNLMILCWGEGHGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKSNEMIKKSERTLRENQCAYINDSIGLHRVENVSHT 148 (200)
T ss_dssp TCEEEEEEECTTCBCCEECCTTCEEEEEEEESCEEEEEECCCCSSCCCCCEEEEEEECTTCEEEECTTTCEEEEECCCSS
T ss_pred ceEEEEEEECCCCcCCCccCCCceEEEEEEeeeEEEEEeecCCCCcccccccceEEeCCCCEEEecCCCcEEEEECCCCC
Confidence 36888899999999999999888999999999999886542110 011 22578999999999 888899999999 7
Q ss_pred CcEEEEEEEeCCCCc
Q 048097 168 TSAVAFAGFSSQFPG 182 (224)
Q Consensus 168 ~~a~~l~~~~s~~pg 182 (224)
++++-|=++.....+
T Consensus 149 ~~avSlHvY~pp~~~ 163 (200)
T 3eln_A 149 EPAVSLHLYSPPFDT 163 (200)
T ss_dssp CCEEEEEEEESCCSE
T ss_pred CCEEEEEeCCCCccc
Confidence 899888888755543
No 119
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=98.00 E-value=2.4e-05 Score=68.01 Aligned_cols=66 Identities=18% Similarity=0.359 Sum_probs=52.5
Q ss_pred cCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEEEE
Q 048097 103 APYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAFAG 175 (224)
Q Consensus 103 ~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l~~ 175 (224)
.|+...-.| |....|++|+++|...+.+.+. ++.....+++||++++|+|+.|.-.-.. ..+.+.+
T Consensus 39 GpN~R~d~H-~~~~dE~FyqlkG~m~l~~~d~----g~~~~V~i~eGemfllP~gv~HsP~r~~--et~gLvi 104 (286)
T 2qnk_A 39 GPNTRKDYH-IEEGEEVFYQLEGDMVLRVLEQ----GKHRDVVIRQGEIFLLPARVPHSPQRFA--NTVGLVV 104 (286)
T ss_dssp SCBCCCCEE-ECSSCEEEEEEESCEEEEEEET----TEEEEEEECTTEEEEECTTCCEEEEECT--TCEEEEE
T ss_pred CCCcCccCc-CCCCCeEEEEEeCeEEEEEEeC----CceeeEEECCCeEEEeCCCCCcCCcccC--CeEEEEE
Confidence 344457889 8889999999999999999874 4555789999999999999999987643 3444433
No 120
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.84 E-value=0.00012 Score=62.54 Aligned_cols=73 Identities=19% Similarity=0.188 Sum_probs=54.6
Q ss_pred cceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEE
Q 048097 93 LGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVA 172 (224)
Q Consensus 93 lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~ 172 (224)
-++++..+.+ .|..... .+| .+|++||++|++++.. + ++ ..++++||+++||+|..|.+...+.. ..+
T Consensus 45 ~~~~~G~~~~-~g~~~v~-~~p-~dE~~~VleG~~~lt~-~-----g~--~~~~~~Gd~~~ip~G~~~~w~~~~~~-~~~ 112 (238)
T 3myx_A 45 QGIAAGIVEF-GTALSVE-AYP-YTEMLVMHRGSVTLTS-G-----TD--SVTLSTGESAVIGRGTQVRIDAQPES-LWA 112 (238)
T ss_dssp TSEEEEEEEE-CSEEEES-SCS-SEEEEEEEESEEEEEE-T-----TE--EEEEETTCEEEECTTCCEEEEECTTE-EEE
T ss_pred CCeEEEEEEe-ccccccc-cCC-CcEEEEEEEeEEEEEC-C-----Ce--EEEEcCCCEEEECCCCEEEEEecCCe-EEE
Confidence 3688888888 5543332 223 3899999999999986 2 33 47899999999999999999876654 445
Q ss_pred EEEEe
Q 048097 173 FAGFS 177 (224)
Q Consensus 173 l~~~~ 177 (224)
++.+.
T Consensus 113 y~~~~ 117 (238)
T 3myx_A 113 FCAST 117 (238)
T ss_dssp EEEEC
T ss_pred EEecc
Confidence 55666
No 121
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=97.82 E-value=8.9e-05 Score=58.40 Aligned_cols=96 Identities=16% Similarity=0.118 Sum_probs=65.2
Q ss_pred CeeEEEccc-cccCcccccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCC-CEEE
Q 048097 76 GFNVTNANV-EQIPGLNTLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKG-DVFV 153 (224)
Q Consensus 76 g~~v~~~~~-~~~p~L~~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~G-Dv~v 153 (224)
.+.++.+.. +..|- .- .=.+...+++||....+|.|.+..|++++++|+..+.+.+.. ...+..|.+. ..+.
T Consensus 17 RG~L~~~e~~~~ipf-~i-kRvy~~~~~~~g~~RG~H~Hk~~~q~li~l~Gs~~v~ldDg~----~~~~~~L~~~~~gL~ 90 (141)
T 2pa7_A 17 RGSLVAIEENKNIPF-SI-KRVYYIFDTKGEEPRGFHAHKKLEQVLVCLNGSCRVILDDGN----IIQEITLDSPAVGLY 90 (141)
T ss_dssp TEEEEEEETTTTSSS-CC-CEEEEEESCCSSCCEEEEEESSCCEEEEEEESCEEEEEECSS----CEEEEEECCTTEEEE
T ss_pred CCcEEEEeccCCCCC-Cc-cEEEEEEecCCCCEECcCcCCCceEEEEEEccEEEEEEECCc----EEEEEEECCCCcEEE
Confidence 344666654 33332 11 112223345688889999999999999999999999886532 2234566544 4589
Q ss_pred EcCCCeeEEEeCCCCcEEEEEEEeCC
Q 048097 154 FPIGLIHFQVNIGKTSAVAFAGFSSQ 179 (224)
Q Consensus 154 ~P~G~~H~~~N~G~~~a~~l~~~~s~ 179 (224)
+|+|..|.+.+.+.+ ++++. +.|.
T Consensus 91 IppgvWh~~~~~s~~-avllv-las~ 114 (141)
T 2pa7_A 91 VGPAVWHEMHDFSSD-CVMMV-LASD 114 (141)
T ss_dssp ECTTCEEEEECCCTT-CEEEE-EESS
T ss_pred eCCCEEEEEEEcCCC-eEEEE-ECCC
Confidence 999999999999886 66663 4443
No 122
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=97.69 E-value=0.00085 Score=56.14 Aligned_cols=84 Identities=17% Similarity=0.180 Sum_probs=66.9
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeE----EEEecCCCEEEEcCC--CeeEEEeCC-
Q 048097 94 GTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLI----AKVLNKGDVFVFPIG--LIHFQVNIG- 166 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~----~~~l~~GDv~v~P~G--~~H~~~N~G- 166 (224)
.+++..+...||...|+|=|. +.-++.|++|+++.....-..+ ++.. ...+.+||+.+|.++ .+|.+.|.+
T Consensus 72 ~f~v~~l~W~PGq~spiHDH~-swg~~~Vl~G~l~e~~y~~~~~-g~~~~~~~~~~l~~G~v~~~~p~~g~IH~V~N~~~ 149 (211)
T 3uss_A 72 RFSVVSFVWGPGQITPVHDHR-VWGLIGMLRGAEYSQPYAFDAG-GRPHPSGARRRLEPGEVEALSPRIGDVHQVSNAFS 149 (211)
T ss_dssp SCEEEEEEECTTCBCCSBCCS-SCEEEEEEESCEEEEEEEECTT-SCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCS
T ss_pred CEEEEEEEECCCCcCCCCCCC-eeEEEEeeeceEEEEEeeeCCC-CCcccccceEEecCCCEEEECCCCCCEEEEccCCC
Confidence 468888999999999999998 8999999999998876432110 2211 278999999999987 899999984
Q ss_pred CCcEEEEEEEeCC
Q 048097 167 KTSAVAFAGFSSQ 179 (224)
Q Consensus 167 ~~~a~~l~~~~s~ 179 (224)
+++++-|=++...
T Consensus 150 d~~avSLHvYg~p 162 (211)
T 3uss_A 150 DRTSISIHVYGAN 162 (211)
T ss_dssp SSCEEEEEEESSC
T ss_pred CCCEEEEEEcCCC
Confidence 7888888777543
No 123
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=97.68 E-value=0.00039 Score=56.53 Aligned_cols=76 Identities=16% Similarity=0.120 Sum_probs=60.4
Q ss_pred EEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCC---CCeeEEEEec---CCCEEEEcCCCeeEEEeCCCCcEEEEE
Q 048097 101 DYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQL---NNTLIAKVLN---KGDVFVFPIGLIHFQVNIGKTSAVAFA 174 (224)
Q Consensus 101 ~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~---~~k~~~~~l~---~GDv~v~P~G~~H~~~N~G~~~a~~l~ 174 (224)
...+|.++..|+|....++++|++|++..-+++-..+ -++.....|. ....++||+|..|.+.|.++++++++.
T Consensus 59 ~s~~GvlRG~H~h~~q~klv~~v~G~v~dv~vD~R~~SpTfg~~~~v~Ls~~~n~~~L~IP~G~aHgf~~lsd~~av~ly 138 (174)
T 3ejk_A 59 EVLPRRVKAWKRHSLMTQLFAVPVGCIHVVLYDGREKSPTSGRLAQVTLGRPDNYRLLRIPPQVWYGFAATGDTPALVAN 138 (174)
T ss_dssp EECBTCEEEEEEESSCCEEEEEEESEEEEEEECCCTTCTTTTCEEEEEEETTTBCEEEEECTTCEEEEEECTTSCEEEEE
T ss_pred ECCCCCEECcEecCCCceEEEEEeeEEEEEEEeCCCCCCCCCeEEEEEECCccCceEEEeCCCcEEEEEEccCCCEEEEE
Confidence 3467889999999888999999999999998874321 0234567787 677999999999999999987776654
Q ss_pred EE
Q 048097 175 GF 176 (224)
Q Consensus 175 ~~ 176 (224)
.-
T Consensus 139 ~~ 140 (174)
T 3ejk_A 139 CT 140 (174)
T ss_dssp EE
T ss_pred EC
Confidence 43
No 124
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=97.57 E-value=0.00029 Score=53.73 Aligned_cols=62 Identities=16% Similarity=0.070 Sum_probs=46.4
Q ss_pred eEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeC
Q 048097 95 TSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNI 165 (224)
Q Consensus 95 is~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~ 165 (224)
......+..||...- +++. .+|++|||+|++++...+ ++ ...+++||+++||+|....+.-.
T Consensus 42 ~~~GvWe~tPG~~~~-~~~~-~~E~~~iLeG~~~lt~dd-----G~--~~~l~aGD~~~~P~G~~gtWev~ 103 (116)
T 3es4_A 42 TIVAVWMAEPGIYNY-AGRD-LEETFVVVEGEALYSQAD-----AD--PVKIGPGSIVSIAKGVPSRLEIL 103 (116)
T ss_dssp CEEEEEEECSEEEEE-CCCS-EEEEEEEEECCEEEEETT-----CC--CEEECTTEEEEECTTCCEEEEEC
T ss_pred EEEEEEecCCceeEC-eeCC-CcEEEEEEEeEEEEEeCC-----Ce--EEEECCCCEEEECCCCeEEEEEe
Confidence 455566888887542 2232 359999999999998643 22 37999999999999999888654
No 125
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.34 E-value=0.001 Score=56.69 Aligned_cols=63 Identities=17% Similarity=0.238 Sum_probs=49.5
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeC
Q 048097 94 GTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNI 165 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~ 165 (224)
.++....+..||...+.+++ ..|+.|||+|++++.-. + ++ ..++++||+++||+|..-.+.-.
T Consensus 166 ~~~~GiW~~tpG~~~~~~~~--~~E~~~ILeG~v~lt~~--~---G~--~~~~~aGD~~~~P~G~~~tWev~ 228 (238)
T 3myx_A 166 TLRIGVWDSTPYERISRPHK--IHELMNLIEGRVVLSLE--N---GS--SLTVNTGDTVFVAQGAPCKWTST 228 (238)
T ss_dssp SCEEEEEEECCEEBCCEECS--SCEEEEEEECCEEEEET--T---SC--EEEECTTCEEEECTTCEEEEEES
T ss_pred CEEEeEEEeCCCEEECCcCC--CCEEEEEEEeEEEEEeC--C---CC--EEEECCCCEEEECCCCEEEEEEC
Confidence 47888889999885544333 57999999999999743 2 33 48999999999999998877655
No 126
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=97.26 E-value=0.001 Score=56.23 Aligned_cols=65 Identities=8% Similarity=-0.019 Sum_probs=49.9
Q ss_pred ceEEEEEEEcCCC--cCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeC
Q 048097 94 GTSAVRIDYAPYG--QNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNI 165 (224)
Q Consensus 94 gis~~~v~l~pgg--~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~ 165 (224)
++-+...++.... ..++|||. .-|++||++|++. .+.. .......+++||++++|+|.+|.+...
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~v~~G~~~-~i~~-----~~~~~~~l~~g~l~~i~p~~~h~~~~~ 72 (276)
T 3gbg_A 6 SFQTNVYRMSKFDTYIFNNLYIN-DYKMFWIDSGIAK-LIDK-----NCLVSYEINSSSIILLKKNSIQRFSLT 72 (276)
T ss_dssp TEEEEEEEECTTCEEEEEEEECS-SCEEEEESSSCEE-EEET-----TTTEEEEECTTEEEEECTTCEEEEEEE
T ss_pred hhhhhhhhhhcccchhccHhhhc-ceEEEEEecCceE-EECC-----ccceeEEEcCCCEEEEcCCCceeeccc
Confidence 4555666676655 46889996 6899999999999 6643 200137899999999999999998765
No 127
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=97.17 E-value=0.0018 Score=55.65 Aligned_cols=72 Identities=19% Similarity=0.220 Sum_probs=55.7
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEc--CCCeeEEEeCCC-CcEEEE
Q 048097 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFP--IGLIHFQVNIGK-TSAVAF 173 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P--~G~~H~~~N~G~-~~a~~l 173 (224)
+....++||.-+++|-|.+-+.+.||++|+++-. |+.+ ++ .++++||+-+.- +|+.|...|... +++.++
T Consensus 66 ln~~~~~pg~gf~~HPHrg~EtvTyvl~G~~~H~--DS~G--n~---~~i~~GdvQ~MtAG~GI~HsE~n~~~~~~l~~l 138 (256)
T 2vec_A 66 LNQEVLAPGAAFQPRTYPKVDILNVILDGEAEYR--DSEG--NH---VQASAGEALLLSTQPGVSYSEHNLSKDKPLTRM 138 (256)
T ss_dssp EEEEEECTTCEEEEECCSSEEEEEEEEESEEEEE--ETTS--CE---EEEETTEEEEECCCTTCCEEEEECCSSSCEEEE
T ss_pred ccccccCCCCccCCcCCCCcEEEEEEEeeEEEEE--eCCC--CE---EEECCCeEEEEECCCCeEEEEEECCCCceEEEE
Confidence 4456789998899999986555889999998775 4432 54 789999999995 568999999764 676665
Q ss_pred EE
Q 048097 174 AG 175 (224)
Q Consensus 174 ~~ 175 (224)
-.
T Consensus 139 Ql 140 (256)
T 2vec_A 139 QL 140 (256)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 128
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=96.98 E-value=0.0019 Score=54.39 Aligned_cols=79 Identities=15% Similarity=0.244 Sum_probs=59.1
Q ss_pred CCeeEEEccccccCcccccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEE
Q 048097 75 LGFNVTNANVEQIPGLNTLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVF 154 (224)
Q Consensus 75 ~g~~v~~~~~~~~p~L~~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~ 154 (224)
.|.++..+.... +-.+..++++||..+++|.| ...|+ +||+|++. +.. ..+.+|+.+..
T Consensus 133 ~Gv~~~~L~~~~-------~E~v~l~r~~~G~~~~~~~h-gG~Ei-lVL~G~~~----d~~--------~~~~~GsWlR~ 191 (223)
T 3o14_A 133 EGISTSLLHEDE-------RETVTHRKLEPGANLTSEAA-GGIEV-LVLDGDVT----VND--------EVLGRNAWLRL 191 (223)
T ss_dssp TTEEEEEEEECS-------SCEEEEEEECTTCEEEECCS-SCEEE-EEEEEEEE----ETT--------EEECTTEEEEE
T ss_pred CCeEEEEEecCC-------CcEEEEEEECCCCccCCCCC-CcEEE-EEEEeEEE----ECC--------ceECCCeEEEe
Confidence 355555554443 23456677899999999999 78996 99999974 222 58999999999
Q ss_pred cCCCeeEEEeCCCCcEEEEEE
Q 048097 155 PIGLIHFQVNIGKTSAVAFAG 175 (224)
Q Consensus 155 P~G~~H~~~N~G~~~a~~l~~ 175 (224)
|.|..|.... |.+.+.++.-
T Consensus 192 P~gs~h~~~a-g~~g~~i~~k 211 (223)
T 3o14_A 192 PEGEALSATA-GARGAKIWMK 211 (223)
T ss_dssp CTTCCEEEEE-EEEEEEEEEE
T ss_pred CCCCccCcEE-CCCCeEEEEE
Confidence 9999999876 6666766643
No 129
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=96.86 E-value=0.006 Score=51.89 Aligned_cols=73 Identities=18% Similarity=0.107 Sum_probs=56.1
Q ss_pred EEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEE--cCCCeeEEEeCCC-CcEEE
Q 048097 96 SAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVF--PIGLIHFQVNIGK-TSAVA 172 (224)
Q Consensus 96 s~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~--P~G~~H~~~N~G~-~~a~~ 172 (224)
.+....+.||.-+++|-|.+-+.+.||++|+++-. |+.+ ++ .++++||+-+. -+|+.|...|... +++.+
T Consensus 42 v~n~d~i~pg~gf~~HPHrg~EtvTyvl~G~~~H~--DS~G--n~---~~i~~GdvQ~MtAG~GI~HsE~~~~~~~~l~~ 114 (242)
T 1tq5_A 42 VINDDVIEAGQGFGTHPHKDMEILTYVLEGTVEHQ--DSMG--NK---EQVPAGEFQIMSAGTGIRHSEYNPSSTERLHL 114 (242)
T ss_dssp EEEEEEECTTCEEEEEEECSCEEEEEEEESEEEEE--ESSS--CE---EEEETTCEEEEECTTCEEEEEECCCSSCCEEE
T ss_pred eeccceeCCCCcCCCcCCCCcEEEEEEEEeEEEEE--eCCC--Cc---EEECCCcEEEEECCCCcEEEEEcCCCCCeEEE
Confidence 34456788988889999987666999999998775 4432 54 78999999999 5579999999764 56655
Q ss_pred EEE
Q 048097 173 FAG 175 (224)
Q Consensus 173 l~~ 175 (224)
+-.
T Consensus 115 lQl 117 (242)
T 1tq5_A 115 YQI 117 (242)
T ss_dssp EEE
T ss_pred EEE
Confidence 433
No 130
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=96.71 E-value=0.019 Score=46.35 Aligned_cols=131 Identities=15% Similarity=0.101 Sum_probs=83.4
Q ss_pred CCCeeEEEccccccC-cccccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecE-EEEEEEeCCCCCCeeEEEE----ec
Q 048097 74 RLGFNVTNANVEQIP-GLNTLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGT-LYVGFVTSNQLNNTLIAKV----LN 147 (224)
Q Consensus 74 ~~g~~v~~~~~~~~p-~L~~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~-~~v~~v~~~~~~~k~~~~~----l~ 147 (224)
+-|+..++...+.-+ +-.....+....-|.+|....+|.. +++|+.+...|. +++.+..++ ++..+.+ +.
T Consensus 27 PEGG~yret~rs~~~~~~~R~~~T~IYfLL~~g~~S~~HRv-~sdEiW~~~~G~pL~l~l~~~d---g~~~~~~LG~dv~ 102 (170)
T 1yud_A 27 VEGGFYRSSYRSETAFDPSRQLWSSIYFLLRTGEVSHFHRL-TADEMWYFHAGQSLTIYMISPE---GELTTAQLGLDLA 102 (170)
T ss_dssp TTSSEEEEEEECSSBSSSSSBSCEEEEEEEETTCCEEEEEC-SSCEEEEEEEESCEEEEEECTT---SCEEEEEESSCTT
T ss_pred CCCceEEEeecCCCCCCCCCccceEEEEEECCCCCCeeEEc-CCCEEEEEEcCCCEEEEEEcCC---CCEEEEEeCCCcc
Confidence 455556555544310 1112234666677889987777777 489999999998 488888776 4443443 67
Q ss_pred CCCE--EEEcCCCeeEEEeCCCCcEEEEEEEeCCCCceeechhhhhcCCCCCCHHHHHhhcCCCHHHHHHhh
Q 048097 148 KGDV--FVFPIGLIHFQVNIGKTSAVAFAGFSSQFPGVITIADTVFGANPPINPDFLGKAFQLDPKIVKDLQ 217 (224)
Q Consensus 148 ~GDv--~v~P~G~~H~~~N~G~~~a~~l~~~~s~~pg~~~~~~~lf~~~p~~p~~vLa~af~~~~~~v~~l~ 217 (224)
+|+. ++||+|..+..++.+.+.+.+-++. .||+..=. |.. .+.+-|.+.|.--++.|++|.
T Consensus 103 ~Ge~pQ~vVP~G~wqaa~~~~g~~~LV~C~V---aPGF~f~d---fel---~~~~~L~~~~P~~~~~I~~lt 165 (170)
T 1yud_A 103 AGERPQFLVPKGCIFGSAMNQDGFSLVGCMV---SPGFTFDD---FEL---FSQEALLAMYPQHKAVVQKLS 165 (170)
T ss_dssp TTEESCEEECTTCEEEEEESSSSEEEEEEEE---SSCCCGGG---CCB---CBHHHHHHSCCTTHHHHTTSC
T ss_pred cCceeEEEECCCCEEEEEECCCCcEEEEEEE---CCCccCCc---eEE---cCHHHHHhHCchhHHHHHHhh
Confidence 8999 9999999999998832444444433 34432211 221 445666666777777777765
No 131
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=96.70 E-value=0.015 Score=47.57 Aligned_cols=70 Identities=13% Similarity=0.140 Sum_probs=53.1
Q ss_pred cCCCcCCCccC--CCCcEEEEEEecEEEEEEEeCCCCC---CeeEEEEecC--CCEEEEcCCCeeEEEeCCCCcEEEE
Q 048097 103 APYGQNPPHTH--PRATEILVVLEGTLYVGFVTSNQLN---NTLIAKVLNK--GDVFVFPIGLIHFQVNIGKTSAVAF 173 (224)
Q Consensus 103 ~pgg~~ppH~H--p~a~Ei~~Vl~G~~~v~~v~~~~~~---~k~~~~~l~~--GDv~v~P~G~~H~~~N~G~~~a~~l 173 (224)
.+|-++..|+| ....++++|++|++..-+++-..++ ++.....|.+ +..++||+|..|.+.+.+++ ++++
T Consensus 56 ~~GvlRGlH~q~p~~q~klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~ 132 (185)
T 1ep0_A 56 VRGVLRGLHFQREKPQGKLVRVIRGEIFDVAVDLRKNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSDE-CIVN 132 (185)
T ss_dssp ETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEE
T ss_pred cCCeEecceecCCccccEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEE
Confidence 37888999999 6678999999999865555533110 2455677754 68999999999999999877 5444
No 132
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=96.65 E-value=0.0044 Score=50.71 Aligned_cols=68 Identities=19% Similarity=0.481 Sum_probs=50.1
Q ss_pred EEEEcCCC-cCCCccCCCCcEEEEEEecEEEEEEEeCCCC-------------------------------CCeeEEEEe
Q 048097 99 RIDYAPYG-QNPPHTHPRATEILVVLEGTLYVGFVTSNQL-------------------------------NNTLIAKVL 146 (224)
Q Consensus 99 ~v~l~pgg-~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~-------------------------------~~k~~~~~l 146 (224)
.+-+.++| ..++|+.+ ..-++.+++|+=++.+..+... +.+.+..+|
T Consensus 127 ~~wiG~~gs~t~~H~D~-~~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l 205 (235)
T 4gjz_A 127 NAWFGPQGTISPLHQDP-QQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCIL 205 (235)
T ss_dssp EEEEECTTCEEEEECCS-SEEEEEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGCCCEEEEE
T ss_pred EEEEeCCCCCceeeecc-ccceEEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCCCcEEEEE
Confidence 34456655 56778776 4678889999999988754310 013456799
Q ss_pred cCCCEEEEcCCCeeEEEeCCC
Q 048097 147 NKGDVFVFPIGLIHFQVNIGK 167 (224)
Q Consensus 147 ~~GDv~v~P~G~~H~~~N~G~ 167 (224)
++||++++|+|..|...|.+.
T Consensus 206 ~pGD~LyiP~gW~H~V~~l~~ 226 (235)
T 4gjz_A 206 SPGEILFIPVKYWHYVRALDL 226 (235)
T ss_dssp CTTCEEEECTTCEEEEEESSS
T ss_pred CCCCEEEeCCCCcEEEEECCC
Confidence 999999999999999999864
No 133
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=96.63 E-value=0.014 Score=48.46 Aligned_cols=71 Identities=15% Similarity=0.195 Sum_probs=53.5
Q ss_pred cCCCcCCCccCC---CCcEEEEEEecEEEEEEEeCCCC---CCeeEEEEecC--CCEEEEcCCCeeEEEeCCCCcEEEE
Q 048097 103 APYGQNPPHTHP---RATEILVVLEGTLYVGFVTSNQL---NNTLIAKVLNK--GDVFVFPIGLIHFQVNIGKTSAVAF 173 (224)
Q Consensus 103 ~pgg~~ppH~Hp---~a~Ei~~Vl~G~~~v~~v~~~~~---~~k~~~~~l~~--GDv~v~P~G~~H~~~N~G~~~a~~l 173 (224)
.+|-++..|+|. ...++++|++|++..-+++-..+ -++.....|.+ +..++||+|..|.+.+.+++..+++
T Consensus 78 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~DV~VDlR~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHGF~~Lsd~a~~~Y 156 (205)
T 3ryk_A 78 EAGTIRGLHFQKNPKAQTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPHTIVMY 156 (205)
T ss_dssp STTBEEEEEEECTTSCCCEEEEEEESEEEEEEEECCTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSSEEEEE
T ss_pred CCCcEeEeEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCceEEEEEcCCCEEEEE
Confidence 578899999995 36899999999976656653211 13456677865 8999999999999999987643333
No 134
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=96.61 E-value=0.015 Score=51.69 Aligned_cols=73 Identities=19% Similarity=0.154 Sum_probs=53.4
Q ss_pred EEEcC-CCcCCCccCCCCcEEEEEEecEEEEEEE-eCCCC------------------------------CCeeEEEEec
Q 048097 100 IDYAP-YGQNPPHTHPRATEILVVLEGTLYVGFV-TSNQL------------------------------NNTLIAKVLN 147 (224)
Q Consensus 100 v~l~p-gg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v-~~~~~------------------------------~~k~~~~~l~ 147 (224)
+-+.| |+..++|+.+ ..-++..++|+=++.+. .+... ....+..+|+
T Consensus 145 ~~~gp~g~~~~~H~D~-~dnfl~Qv~G~Krw~L~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~L~ 223 (342)
T 1vrb_A 145 VYAAKNGGGFKAHFDA-YTNLIFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLT 223 (342)
T ss_dssp EEEECSSCCCCSEECS-SEEEEEEEESCEEEEEECCSSCSSCSSCEECC----CCHHHHHHCCSCCCCTTCCSSEEEEEC
T ss_pred EEEeCCCCCCCCeECC-hhcEEEEEEEEEEEEEecCCccccccCcccccccccccccccccchhhccccccCCceEEEEC
Confidence 44555 7789999987 46788889998888777 32200 0123567999
Q ss_pred CCCEEEEcCCCeeEEEeCCCCcEEEE
Q 048097 148 KGDVFVFPIGLIHFQVNIGKTSAVAF 173 (224)
Q Consensus 148 ~GDv~v~P~G~~H~~~N~G~~~a~~l 173 (224)
+||++++|+|..|+..+.++++..-+
T Consensus 224 pGD~LyiP~gwwH~v~s~~~~~slsv 249 (342)
T 1vrb_A 224 PGTMLYLPRGLWHSTKSDQATLALNI 249 (342)
T ss_dssp TTCEEEECTTCEEEEECSSCEEEEEE
T ss_pred CCcEEEeCCCccEEEEECCCCceEEE
Confidence 99999999999999999865444444
No 135
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=96.61 E-value=0.012 Score=45.29 Aligned_cols=72 Identities=21% Similarity=0.186 Sum_probs=54.4
Q ss_pred cCCCcCCCc----cCCCCcEEEEEEecEEEEEEEeCCCCCC-e-eEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEEEEE
Q 048097 103 APYGQNPPH----THPRATEILVVLEGTLYVGFVTSNQLNN-T-LIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAFAGF 176 (224)
Q Consensus 103 ~pgg~~ppH----~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~-k-~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l~~~ 176 (224)
-|+++.+.| +|+...+.+.|++|++.+.+.++++ + . .......+|+..++|++..|.++-..+ ++.+..-|
T Consensus 22 lP~~ll~~H~~~~Tk~Gtwg~l~VL~G~L~f~~~~e~g--~~~~~~~~l~~~~~~~~i~Pq~wH~Ve~lsd-d~~f~leF 98 (127)
T 3bb6_A 22 APAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEH--SAEPDQVILIEAGQFAVFPPEKWHNIEAMTD-DTYFNIDF 98 (127)
T ss_dssp SCGGGGSSBCCTTCCTTEEEEEEEEESEEEEEEESSTT--CSSCSEEEEEEBTBEEECCSSCEEEEEESST-TCEEEEEE
T ss_pred ChHHHHhhccccCCCCCEEEEEEEEEeEEEEEEECCCC--CcceeEEEEeCCCCceEECCCCcEEEEEcCC-CEEEEEEE
Confidence 367788999 5988889999999999998665542 3 1 223567999999999999999997555 55554444
Q ss_pred e
Q 048097 177 S 177 (224)
Q Consensus 177 ~ 177 (224)
-
T Consensus 99 y 99 (127)
T 3bb6_A 99 F 99 (127)
T ss_dssp E
T ss_pred E
Confidence 3
No 136
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=96.59 E-value=0.019 Score=46.89 Aligned_cols=70 Identities=14% Similarity=0.085 Sum_probs=53.0
Q ss_pred cCCCcCCCccC--CCCcEEEEEEecEEEEEEEeCCCCC---CeeEEEEecC--CCEEEEcCCCeeEEEeCCCCcEEEE
Q 048097 103 APYGQNPPHTH--PRATEILVVLEGTLYVGFVTSNQLN---NTLIAKVLNK--GDVFVFPIGLIHFQVNIGKTSAVAF 173 (224)
Q Consensus 103 ~pgg~~ppH~H--p~a~Ei~~Vl~G~~~v~~v~~~~~~---~k~~~~~l~~--GDv~v~P~G~~H~~~N~G~~~a~~l 173 (224)
.+|-++..|+| ....++++|++|++..-+++-..++ ++.....|.+ +..++||+|..|.+.+.+++ ++++
T Consensus 57 ~~GvlRG~H~q~p~~q~Klv~vv~G~v~dV~vD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~ 133 (184)
T 2ixk_A 57 ARGVLRGLHYQIRQAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEY-AEFL 133 (184)
T ss_dssp ETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEE
T ss_pred CCCceeeEEeCCCCCcCEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEeCCCcCCEEEeCCCeEEEEEEcCCC-EEEE
Confidence 37889999999 6678999999999865555532110 2455677765 68999999999999999877 5444
No 137
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=96.34 E-value=0.033 Score=45.94 Aligned_cols=69 Identities=16% Similarity=0.109 Sum_probs=51.8
Q ss_pred cCCCcCCCccCCC---CcEEEEEEecEEEEEEEeCCCC---CCeeEEEEecC--CCEEEEcCCCeeEEEeCCCCcEEE
Q 048097 103 APYGQNPPHTHPR---ATEILVVLEGTLYVGFVTSNQL---NNTLIAKVLNK--GDVFVFPIGLIHFQVNIGKTSAVA 172 (224)
Q Consensus 103 ~pgg~~ppH~Hp~---a~Ei~~Vl~G~~~v~~v~~~~~---~~k~~~~~l~~--GDv~v~P~G~~H~~~N~G~~~a~~ 172 (224)
.+|-++..|+|.. ..++++|++|++..-+++-..+ -++.....|.+ +..++||+|..|.+.+.+++ +++
T Consensus 73 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~en~~~L~IP~G~aHgf~~lsd~-a~~ 149 (196)
T 1wlt_A 73 RKGVVRGLHYQRTPKEQGKIIFVPKGRILDVAVDVRKSSPTFGKYVKAELNEENHYMLWIPPGFAHGFQALEDS-IVI 149 (196)
T ss_dssp CTTBEEEEEEECTTSCCEEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEESSSE-EEE
T ss_pred CCCcceeEEccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEE
Confidence 4777899999964 5799999999996555553210 12355677764 79999999999999999875 444
No 138
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=96.34 E-value=0.043 Score=44.69 Aligned_cols=70 Identities=13% Similarity=0.066 Sum_probs=52.3
Q ss_pred cCCCcCCCccCC---CCcEEEEEEecEEEEEEEeCCCC---CCeeEEEEecC--CCEEEEcCCCeeEEEeCCCCcEEEE
Q 048097 103 APYGQNPPHTHP---RATEILVVLEGTLYVGFVTSNQL---NNTLIAKVLNK--GDVFVFPIGLIHFQVNIGKTSAVAF 173 (224)
Q Consensus 103 ~pgg~~ppH~Hp---~a~Ei~~Vl~G~~~v~~v~~~~~---~~k~~~~~l~~--GDv~v~P~G~~H~~~N~G~~~a~~l 173 (224)
.+|-++..|+|. ...++++|++|++..-+++-..+ =++.....|.+ +..++||+|..|.+.+.+++ ++++
T Consensus 55 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~ 132 (183)
T 1dzr_A 55 KKNVLRGLHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEY-AEFL 132 (183)
T ss_dssp ETTBEEEEEEECGGGCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEE
T ss_pred CCCeeeeeEccCCCCCCcEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEE
Confidence 378889999995 67899999999986555553311 02455677755 68999999999999999877 4443
No 139
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=96.19 E-value=0.02 Score=50.90 Aligned_cols=75 Identities=15% Similarity=0.133 Sum_probs=54.9
Q ss_pred EEEcC-CCcCCCccCCCCcEEEEEEecEEEEEEEeCCC---------------------C-----------CCeeEEEEe
Q 048097 100 IDYAP-YGQNPPHTHPRATEILVVLEGTLYVGFVTSNQ---------------------L-----------NNTLIAKVL 146 (224)
Q Consensus 100 v~l~p-gg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~---------------------~-----------~~k~~~~~l 146 (224)
+-+.+ |+..++|+.+. .-+..+++|+=++.+..+.. . ..+.+..+|
T Consensus 187 l~iG~~gs~t~~H~D~~-~n~~~qv~G~K~~~L~pP~~~~~ly~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l 265 (349)
T 3d8c_A 187 LLIGMEGNVTPAHYGEQ-QNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVV 265 (349)
T ss_dssp EEEECTTCEEEEECCSE-EEEEEEEESCEEEEEECGGGHHHHCBBCTTSTTBTBBCSCTTSCCTTTCGGGGGCCEEEEEE
T ss_pred EEEECCCCCccceECCh-hcEEEEEeceEEEEEeCcchhhhhccccccCCCCCcccccCCCcchhhCcccccCCcEEEEE
Confidence 55655 45679999874 78888999998888765420 0 014567899
Q ss_pred cCCCEEEEcCCCeeEEEeCCC-CcEEEEEE
Q 048097 147 NKGDVFVFPIGLIHFQVNIGK-TSAVAFAG 175 (224)
Q Consensus 147 ~~GDv~v~P~G~~H~~~N~G~-~~a~~l~~ 175 (224)
++||++++|+|..|...|.++ ...+.+..
T Consensus 266 ~pGD~LyiP~gWwH~V~~l~d~~~sisvn~ 295 (349)
T 3d8c_A 266 GPGDVLYIPMYWWHHIESLLNGGITITVNF 295 (349)
T ss_dssp CTTCEEEECTTCEEEEEECTTSCCEEEEEE
T ss_pred CCCCEEEECCCCcEEEEEcCCCCcEEEEEE
Confidence 999999999999999999873 44444443
No 140
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=96.09 E-value=0.056 Score=44.82 Aligned_cols=70 Identities=10% Similarity=0.024 Sum_probs=52.5
Q ss_pred cCCCcCCCccCCC---CcEEEEEEecEEEEEEEeCCCC---CCeeEEEEecC--CCEEEEcCCCeeEEEeCCCCcEEEE
Q 048097 103 APYGQNPPHTHPR---ATEILVVLEGTLYVGFVTSNQL---NNTLIAKVLNK--GDVFVFPIGLIHFQVNIGKTSAVAF 173 (224)
Q Consensus 103 ~pgg~~ppH~Hp~---a~Ei~~Vl~G~~~v~~v~~~~~---~~k~~~~~l~~--GDv~v~P~G~~H~~~N~G~~~a~~l 173 (224)
.+|-++..|+|.. ..++++|++|++..-+++-..+ -++.....|.+ +..++||+|..|.+.+.+++ ++++
T Consensus 55 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~ 132 (205)
T 1oi6_A 55 KRGVVRGIHYTVTPPGTAKYVYCARGKAMDIVIDIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALEDD-TVMS 132 (205)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESCEEEEEECCCBTCTTTTCEEEEEECSSSCCEEEECTTCEEEEEECSTT-EEEE
T ss_pred CCCeEeeeeccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEccCC-eEEE
Confidence 5788899999964 5899999999986555553210 12456677765 58999999999999999887 4443
No 141
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=96.07 E-value=0.036 Score=45.71 Aligned_cols=69 Identities=12% Similarity=0.088 Sum_probs=53.2
Q ss_pred cCCCcCCCccCCCCcEEEEEEe-cEEEEEEEeCCCC--CCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEE
Q 048097 103 APYGQNPPHTHPRATEILVVLE-GTLYVGFVTSNQL--NNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAF 173 (224)
Q Consensus 103 ~pgg~~ppH~Hp~a~Ei~~Vl~-G~~~v~~v~~~~~--~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l 173 (224)
.+|.++..|.|+ ..++++|++ |++..-+++-.++ -++.....|..+..++||+|..|...+.+++ ++++
T Consensus 68 ~~GvlRGlH~h~-q~Klv~~~~~G~v~dV~VDlR~SpTfg~~~~v~Ls~~~~L~IP~G~aHgf~~lsd~-a~~~ 139 (197)
T 1nxm_A 68 RKNVLRGLHAEP-WDKYISVADGGKVLGTWVDLREGETFGNTYQTVIDASKSIFVPRGVANGFQVLSDF-VAYS 139 (197)
T ss_dssp ETTBEEEEEECS-SCEEEEECSSCCEEEEEEECBSSTTTTCEEEEEECTTEEEEECTTEEEEEEECSSE-EEEE
T ss_pred CCCCcceeeecc-cceEEEEcCCCEEEEEEEECCCCCCCCeEEEEEeCCCcEEEeCCCeEEEEEeccCC-eEEE
Confidence 578889999995 689999999 9975555553210 0345678898999999999999999998766 4444
No 142
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=96.03 E-value=0.056 Score=45.20 Aligned_cols=70 Identities=11% Similarity=0.003 Sum_probs=51.8
Q ss_pred cCCCcCCCccCCC---CcEEEEEEecEEEEEEEeCCCC---CCeeEEEEecC--CCEEEEcCCCeeEEEeCCCCcEEEE
Q 048097 103 APYGQNPPHTHPR---ATEILVVLEGTLYVGFVTSNQL---NNTLIAKVLNK--GDVFVFPIGLIHFQVNIGKTSAVAF 173 (224)
Q Consensus 103 ~pgg~~ppH~Hp~---a~Ei~~Vl~G~~~v~~v~~~~~---~~k~~~~~l~~--GDv~v~P~G~~H~~~N~G~~~a~~l 173 (224)
.+|-++..|+|.. ..++++|++|++..-+++-..+ -++.....|.+ +..++||+|..|.+.+.+++ ++++
T Consensus 63 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~-a~~l 140 (216)
T 2c0z_A 63 VRGVVRGIHFVDVPPGQAKYVTCVRGAVFDVVVDLRVGSPTYGCWEGTRLDDVSRRAVYLSEGIGHGFCAISDE-ATLC 140 (216)
T ss_dssp ETTBEEEEEEECTTTCCCEEEEEEESEEEEEEEECCBTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEE
T ss_pred CCCcEEcCEecCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEcCCC-eEEE
Confidence 4788899999965 5899999999985545543210 12455677765 58999999999999999877 4443
No 143
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=95.93 E-value=0.087 Score=44.32 Aligned_cols=67 Identities=12% Similarity=0.071 Sum_probs=50.7
Q ss_pred cCCCcCCCccCCC---CcEEEEEEecEEEEEEEeCCCC---CCeeEEEEecC--CCEEEEcCCCeeEEEeCCCCc
Q 048097 103 APYGQNPPHTHPR---ATEILVVLEGTLYVGFVTSNQL---NNTLIAKVLNK--GDVFVFPIGLIHFQVNIGKTS 169 (224)
Q Consensus 103 ~pgg~~ppH~Hp~---a~Ei~~Vl~G~~~v~~v~~~~~---~~k~~~~~l~~--GDv~v~P~G~~H~~~N~G~~~ 169 (224)
.+|-++..|+|.. ..++++|++|++..-+++-..+ -++.....|.+ +..++||+|..|.+.+.+++.
T Consensus 74 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~a 148 (225)
T 1upi_A 74 SAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDNS 148 (225)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSSSE
T ss_pred CCCeEeeeeccCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCcEEEEEecCCCCcEEEeCCCeeEEEEEcCCCE
Confidence 5788899999964 5899999999986555543210 12455677765 589999999999999998874
No 144
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=95.89 E-value=0.053 Score=45.96 Aligned_cols=84 Identities=20% Similarity=0.175 Sum_probs=57.9
Q ss_pred eEEEEEEEcCCCcCCCccCCCCcEEEEEEec-EEEEEEEeC--CCC----------CCeeE------EEEecCCCEEEEc
Q 048097 95 TSAVRIDYAPYGQNPPHTHPRATEILVVLEG-TLYVGFVTS--NQL----------NNTLI------AKVLNKGDVFVFP 155 (224)
Q Consensus 95 is~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G-~~~v~~v~~--~~~----------~~k~~------~~~l~~GDv~v~P 155 (224)
..--.+.+.+|...|.|.|+.=.|-+++.-| .+.+.+..+ +++ .++.+ ..+|+||+.+-++
T Consensus 106 YaeK~Li~~~gQ~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESiTl~ 185 (246)
T 3kmh_A 106 YAEKIMHVRDAQVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESICLP 185 (246)
T ss_dssp EEEEEEEECBTCEEEEEEESSCCEEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEEEEC
T ss_pred ceeeEeeccCCCCCCcccCCCccccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeEecC
Confidence 4556678899999999999999999999998 443333322 210 11111 2478999999999
Q ss_pred CCCeeEEEeCCC-CcEEEEEEEeCC
Q 048097 156 IGLIHFQVNIGK-TSAVAFAGFSSQ 179 (224)
Q Consensus 156 ~G~~H~~~N~G~-~~a~~l~~~~s~ 179 (224)
+|+.|+++-.+. +++ ++.-+++.
T Consensus 186 Pg~~H~F~ae~g~G~v-ligEVSt~ 209 (246)
T 3kmh_A 186 PGLYHSFWAEAGFGDV-LVGEVSSV 209 (246)
T ss_dssp TTEEEEEEECTTSCCE-EEEEEEEC
T ss_pred CCCEEEEEecCCCccE-EEEEcccC
Confidence 999999987654 244 44455543
No 145
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=95.52 E-value=0.056 Score=49.74 Aligned_cols=66 Identities=24% Similarity=0.363 Sum_probs=48.8
Q ss_pred EEEcCCCc--CCCccCCCCcEEEEEEecEEEEEEEeCCC---C----------CCeeEEEEecCCCEEEEcCCCeeEEEe
Q 048097 100 IDYAPYGQ--NPPHTHPRATEILVVLEGTLYVGFVTSNQ---L----------NNTLIAKVLNKGDVFVFPIGLIHFQVN 164 (224)
Q Consensus 100 v~l~pgg~--~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~---~----------~~k~~~~~l~~GDv~v~P~G~~H~~~N 164 (224)
+-+.|+|. .++|+-+ ..-+++.++|+=+..+..+.. . +...+..+|++||++++|+|..|+...
T Consensus 143 ~y~~~~g~~g~~~H~D~-~dvf~~Qv~G~Krw~l~~p~~pl~~~~s~d~~~~~~~~~~~~~L~pGD~LYiP~g~~H~~~s 221 (442)
T 2xdv_A 143 VYITPAGSQGLPPHYDD-VEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIHQADT 221 (442)
T ss_dssp EEEECTTCBCSCSEECS-SEEEEEEEESCEEEEEECCSSTTCSSCEECCTTTSCSCSEEEEECTTCEEEECTTCEEEEEC
T ss_pred eEECCCCCCCccceECC-cceEEEEEEeEEEEEEccCCCCccccCCCCchhhcCCcceEEEECCCcEEEECCCceEEEEe
Confidence 45556553 3799975 567888889988888765531 0 012356899999999999999999998
Q ss_pred CC
Q 048097 165 IG 166 (224)
Q Consensus 165 ~G 166 (224)
.+
T Consensus 222 ~~ 223 (442)
T 2xdv_A 222 PA 223 (442)
T ss_dssp CS
T ss_pred cC
Confidence 75
No 146
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=95.51 E-value=0.11 Score=43.08 Aligned_cols=71 Identities=8% Similarity=-0.014 Sum_probs=53.7
Q ss_pred cCCCcCCCccCC---CCcEEEEEEecEEEEEEEeCCCC---CCeeEEEEecC--CCEEEEcCCCeeEEEeCCCCcEEEE
Q 048097 103 APYGQNPPHTHP---RATEILVVLEGTLYVGFVTSNQL---NNTLIAKVLNK--GDVFVFPIGLIHFQVNIGKTSAVAF 173 (224)
Q Consensus 103 ~pgg~~ppH~Hp---~a~Ei~~Vl~G~~~v~~v~~~~~---~~k~~~~~l~~--GDv~v~P~G~~H~~~N~G~~~a~~l 173 (224)
.+|-++.+|+|. ....+++|++|++.--++|-..+ =++.....|.+ +..++||+|..|.+.+.+++..+.+
T Consensus 52 ~~GvlRGlH~q~~p~~q~KlV~~~~G~v~DV~VDlR~~SpTfG~w~~v~Ls~en~~~l~IP~GfaHGF~~Lsd~a~~~Y 130 (201)
T 4hn1_A 52 HRGALRGINYTEIPPGQAKYSVCVRGAGLDVVVDVRIGSPTFGRWEIVPMDAERNTAVYLTAGLGRAFLSLTDDATLVF 130 (201)
T ss_dssp CTTBEEEEEEECSSSCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSTTEEEEE
T ss_pred CCCceEEEEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCcceEEEeecCCCeEEEE
Confidence 578889999984 57899999999987767764311 13455667765 8899999999999999887644444
No 147
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=95.45 E-value=0.043 Score=48.45 Aligned_cols=74 Identities=16% Similarity=0.090 Sum_probs=52.8
Q ss_pred EEEEcC-CCcCCCccCCCCcEEEEEEecEEEEEEEeCCC-------------------C--------CCeeEEEEecCCC
Q 048097 99 RIDYAP-YGQNPPHTHPRATEILVVLEGTLYVGFVTSNQ-------------------L--------NNTLIAKVLNKGD 150 (224)
Q Consensus 99 ~v~l~p-gg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~-------------------~--------~~k~~~~~l~~GD 150 (224)
.+-+.+ |+..++|+.+. .-++.++.|+=++.+..+.. . ..+.+..+|++||
T Consensus 170 ~l~~g~~g~~~~~H~D~~-~n~~~qv~G~K~w~L~pP~~~~~ly~~~~~~~~~d~~~~d~~~~p~~~~~~~~~~~L~pGD 248 (338)
T 3al5_A 170 VFRISSPGLQLWTHYDVM-DNLLIQVTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYECSLEAGD 248 (338)
T ss_dssp EEEEECTTCEEEEECCSS-EEEEEECSSCEEEEEECGGGGGGGTEETTEESCCCSSSCCTTTCTTGGGCCEEEEEECTTC
T ss_pred eeEECCCCCCccceECCc-ccEEEEEEEEEEEEEECcccccccccCCCCcccccCCCcchhhCcccccCCCEEEEECCCC
Confidence 344555 45678898874 67778899998888765420 0 0125678999999
Q ss_pred EEEEcCCCeeEEEeCCCCcEEEEEE
Q 048097 151 VFVFPIGLIHFQVNIGKTSAVAFAG 175 (224)
Q Consensus 151 v~v~P~G~~H~~~N~G~~~a~~l~~ 175 (224)
++++|+|..|...|.+ ..+.+..
T Consensus 249 ~LyiP~gWwH~v~~l~--~sisvn~ 271 (338)
T 3al5_A 249 VLFIPALWFHNVISEE--FGVGVNI 271 (338)
T ss_dssp EEEECTTCEEEEEESS--CEEEEEE
T ss_pred EEEECCCCeEEEeeCC--CEEEEEE
Confidence 9999999999999985 3444443
No 148
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=95.42 E-value=0.12 Score=48.11 Aligned_cols=71 Identities=21% Similarity=0.341 Sum_probs=51.0
Q ss_pred EEEEcCCCc--CCCccCCCCcEEEEEEecEEEEEEEeCCCC-----------------CCeeEEEEecCCCEEEEcCCCe
Q 048097 99 RIDYAPYGQ--NPPHTHPRATEILVVLEGTLYVGFVTSNQL-----------------NNTLIAKVLNKGDVFVFPIGLI 159 (224)
Q Consensus 99 ~v~l~pgg~--~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~-----------------~~k~~~~~l~~GDv~v~P~G~~ 159 (224)
.+.+.|+|. .++|+-+ ..-+++-++|+=+..+..+... +...+..+|++||++++|+|.+
T Consensus 167 N~Y~tp~Gs~g~~pH~D~-~DvFllQv~G~KrWrL~~P~~~~~~lp~~~~~~~~~~~~~~p~~e~~L~pGDvLYiP~g~~ 245 (489)
T 4diq_A 167 NVYLTPPNSQGFAPHYDD-IEAFVLQLEGRKLWRVYRPRAPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLLYFPRGFI 245 (489)
T ss_dssp EEEEECSSBCCSCCBCCS-SEEEEEEEEECEEEEEECCSSGGGTTCSSCCCCCCGGGCCCCSEEEEECTTCEEEECTTCE
T ss_pred eEEecCCCcccccCccCC-cceEEEEEeeEEEEEEeCCCCccccCCCcccccCCcccccCcceEEEECCCCEEEECCCCc
Confidence 355666664 5799887 4667777888777777654210 1224578999999999999999
Q ss_pred eEEEeCCCCcE
Q 048097 160 HFQVNIGKTSA 170 (224)
Q Consensus 160 H~~~N~G~~~a 170 (224)
|+..+.+++..
T Consensus 246 H~~~s~~~~~S 256 (489)
T 4diq_A 246 HQAECQDGVHS 256 (489)
T ss_dssp EEEEBCSSCCE
T ss_pred eEEEecCCCce
Confidence 99999865544
No 149
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=95.28 E-value=0.019 Score=50.10 Aligned_cols=75 Identities=16% Similarity=0.189 Sum_probs=49.8
Q ss_pred eEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeC-CCC-----CCeeEEEEecCCCEEEEcCCCeeEEEeCCCC
Q 048097 95 TSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTS-NQL-----NNTLIAKVLNKGDVFVFPIGLIHFQVNIGKT 168 (224)
Q Consensus 95 is~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~-~~~-----~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~ 168 (224)
+.++|+.+.||+.+.||.=+ -|+....+|..++.+--. +++ +++ ...+++|+++++....+|+..|.|++
T Consensus 91 l~~vRlrL~PG~~I~~HrD~--~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~--~~~m~~GE~w~~d~~~~H~v~N~g~~ 166 (290)
T 1e5r_A 91 LQMARSRNLKNAIVIPHRDF--VELDREVDRYFRTFMVLEDSPLAFHSNEDT--VIHMRPGEIWFLDAATVHSAVNFSEI 166 (290)
T ss_dssp EEEEEEEEEESEEEEEECCC----------CBCCEEEECSCCTTEEEEETTE--EECCCTTEEEECCTTSCEEEEESSSS
T ss_pred hheEEEEeCCCCEeeCccCc--cccccccCCceEEEeeEecCCCcEEEECCE--EEecCCCCEEEEcCCCeeEEEcCCCC
Confidence 47888899999999999443 365555678776665422 210 122 46889999999999999999999986
Q ss_pred cEEEE
Q 048097 169 SAVAF 173 (224)
Q Consensus 169 ~a~~l 173 (224)
+-+-+
T Consensus 167 ~RIhL 171 (290)
T 1e5r_A 167 SRQSL 171 (290)
T ss_dssp CCCEE
T ss_pred CeEEE
Confidence 54333
No 150
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=95.16 E-value=0.094 Score=43.20 Aligned_cols=90 Identities=19% Similarity=0.211 Sum_probs=58.7
Q ss_pred ccccCcccccce-EEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCC-----CCeeEEEEecCCCEEEEcCC
Q 048097 84 VEQIPGLNTLGT-SAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQL-----NNTLIAKVLNKGDVFVFPIG 157 (224)
Q Consensus 84 ~~~~p~L~~lgi-s~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~-----~~k~~~~~l~~GDv~v~P~G 157 (224)
.+++|++..... ++....+.||+.++||..+....+-+ .++++.++.+ +++ ....++|++++|--.
T Consensus 90 L~~ip~~~~~~~~~a~fs~L~pG~~I~pH~g~~n~~lR~------HL~L~~p~~~~~i~V~~~--~~~w~eGe~~~fDds 161 (197)
T 3rcq_A 90 LEKFPETTGCRRGQIKYSIMHPGTHVWPHTGPTNCRLRM------HLGLVIPKEGCKIRCANE--TKTWEEGKVLIFDDS 161 (197)
T ss_dssp HTTCHHHHTCTTCEEEEEEECTTEEEEEECCSCTTEEEE------EEEEECCSSSEEEEETTE--EECCCBTCEEEECTT
T ss_pred HHhCcccccCCcceEEEEEeCCCCCcCCeeCCCCCeEEE------EEEEEeCCCCcEEEECCE--EEEeeCCcEEEEcCC
Confidence 456776553222 45667899999999999985433322 2233333200 133 467899999999999
Q ss_pred CeeEEEeCCCCcEEEEEEEeCCCCc
Q 048097 158 LIHFQVNIGKTSAVAFAGFSSQFPG 182 (224)
Q Consensus 158 ~~H~~~N~G~~~a~~l~~~~s~~pg 182 (224)
..|...|.++++-+++ .++--.|.
T Consensus 162 ~~Hev~N~~d~~RvvL-~~D~~rPd 185 (197)
T 3rcq_A 162 FEHEVWQDASSFRLIF-IVDVWHPE 185 (197)
T ss_dssp SCEEEEECSSSCEEEE-EEEEECTT
T ss_pred eEEEEEECCCCCEEEE-EEeeeCCC
Confidence 9999999998875555 44434443
No 151
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=95.08 E-value=0.12 Score=44.68 Aligned_cols=68 Identities=21% Similarity=0.221 Sum_probs=52.7
Q ss_pred EEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcC--CCeeEEEeCCCCcEEEEEE
Q 048097 101 DYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPI--GLIHFQVNIGKTSAVAFAG 175 (224)
Q Consensus 101 ~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~--G~~H~~~N~G~~~a~~l~~ 175 (224)
...++.-+++|-|.+-+=+.||++|+++-. |+.+ ++ .++++||+-+.-+ |+.|.-.|..++++.++-.
T Consensus 45 ~~~~~~gf~~HPHrg~EtVTyvl~G~~~H~--DS~G--n~---~~i~~GdvQwMtAG~GI~HsE~~~~~~~~~~lQl 114 (277)
T 2p17_A 45 DIFERGTFDVHPHRGIETVTYVISGELEHF--DSKA--GH---STLGPGDVQWMTAGRGVVHKEDPASGSTVHSLQL 114 (277)
T ss_dssp EEECTTCCCCEEECSEEEEEEEEESCEEEE--ETTT--EE---EEECTTCEEEEECTTCEEEEEEECTTCCEEEEEE
T ss_pred CCCCCCCCCCCCCCCcEEEEEEEEeEEEEe--eCCC--Cc---eEECCCeEEEEeCCCCEEEEeecCCCCCEEEEEE
Confidence 557888899999976444889999998764 4442 44 7899999999987 6899999987777666433
No 152
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=94.96 E-value=0.19 Score=43.29 Aligned_cols=81 Identities=20% Similarity=0.239 Sum_probs=54.0
Q ss_pred ceEEEEEEEcCCCc---CCCccCCCC--c------EEEEE-E---ecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCC
Q 048097 94 GTSAVRIDYAPYGQ---NPPHTHPRA--T------EILVV-L---EGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGL 158 (224)
Q Consensus 94 gis~~~v~l~pgg~---~ppH~Hp~a--~------Ei~~V-l---~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~ 158 (224)
.+-+..+ +.|||. -|||.|.+. . |+.|. + +|-+.-.+.+++++.+. +..++-||++++|+|.
T Consensus 152 ~LlvgEv-~tpgG~WSSyPpHkHd~~~~~~e~~lEE~YYf~~~~~~gf~~q~vyt~d~~~de--~~~V~~~d~VlvP~Gy 228 (270)
T 2qjv_A 152 SLLVVEV-YTNAGATSSWPAHXHDTAVEGQETYLEETYYHRFNPPQGFCLQRVYTDDRSLDE--CMAVYNRDVVXVPXGY 228 (270)
T ss_dssp SCEEEEE-EECTTCEESCSCEECEEEETTTEEECEEEEEEEEESTTCEEEEEEECTTSSSEE--EEEEETTCEEEESSSB
T ss_pred eEEEEEE-EcCCCccccCCCcccccccCcccccceeEEEEECCCCCCEEEEEEeCCCCCCce--EEEEECCCEEecCCCc
Confidence 4667766 888885 499999864 4 88864 3 35554444333321123 5889999999999999
Q ss_pred eeEEEeCCCCcEEEEEEEeC
Q 048097 159 IHFQVNIGKTSAVAFAGFSS 178 (224)
Q Consensus 159 ~H~~~N~G~~~a~~l~~~~s 178 (224)
|-....-.....++.+...
T Consensus 229 -Hp~~a~pGy~~YylwvMaG 247 (270)
T 2qjv_A 229 -HPVATIAGYDNYYLNVMAG 247 (270)
T ss_dssp -CCEEECTTCEEEEEEEEEC
T ss_pred -CCCcCCCCcccEEEEEEEC
Confidence 9865443334556666654
No 153
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=94.87 E-value=0.095 Score=46.48 Aligned_cols=69 Identities=16% Similarity=0.208 Sum_probs=51.2
Q ss_pred EEEcCC-CcCCCccCCCCc-EEEEEEecEEEEEEEeCCCC------------------------------------CCee
Q 048097 100 IDYAPY-GQNPPHTHPRAT-EILVVLEGTLYVGFVTSNQL------------------------------------NNTL 141 (224)
Q Consensus 100 v~l~pg-g~~ppH~Hp~a~-Ei~~Vl~G~~~v~~v~~~~~------------------------------------~~k~ 141 (224)
+-+.+. ...+.|+++..+ -+..++.|+=++.+..+... ..+.
T Consensus 176 ~~~G~~gs~t~~H~D~~~~~~~~~~v~G~K~~~L~pP~~~~~ly~~~~~~~~~~~~~~~~w~~~~~P~~~~~~~p~~~~~ 255 (336)
T 3k2o_A 176 FVMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTRDEGGNQQDEAITWFNVIYPRTQLPTWPPEFKP 255 (336)
T ss_dssp EEEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECTTSCHHHHCCCHHHHGGGTTCHHHHHHHTGGGGGSTTSCGGGCC
T ss_pred EEECCCCccCCcccCCCccceeeEEEeeeEEEEEeCCCcchhcccCcccccCCCccchhhhhhhhCcchhhhcccccCce
Confidence 445554 467889998654 58889999888877754310 0123
Q ss_pred EEEEecCCCEEEEcCCCeeEEEeCCCC
Q 048097 142 IAKVLNKGDVFVFPIGLIHFQVNIGKT 168 (224)
Q Consensus 142 ~~~~l~~GDv~v~P~G~~H~~~N~G~~ 168 (224)
+..++++||++++|+|..|+..|.++.
T Consensus 256 ~~~~l~pGd~l~iP~gw~H~v~~~~~s 282 (336)
T 3k2o_A 256 LEILQKPGETVFVPGGWWHVVLNLDTT 282 (336)
T ss_dssp EEEEECTTCEEEECTTCEEEEEESSCE
T ss_pred EEEEECCCCEEEeCCCCcEEEecCCCe
Confidence 568899999999999999999998753
No 154
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=94.85 E-value=0.18 Score=43.37 Aligned_cols=73 Identities=22% Similarity=0.232 Sum_probs=59.7
Q ss_pred cccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeE-EEeCCCCc
Q 048097 91 NTLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHF-QVNIGKTS 169 (224)
Q Consensus 91 ~~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~-~~N~G~~~ 169 (224)
..-|-+-.+|.++|+=-.|+-.|.--.| +||++|++.++ + ..+.+|+..++|+|+.-- ++-.|.++
T Consensus 87 ~d~GaSTl~V~fpp~~~~P~Gi~~ad~E-~fVL~G~i~~G--------~----~~l~~h~Y~f~PaGV~~~~~kv~~~~g 153 (303)
T 2qdr_A 87 HDSGASTSRVVLPPKFEAPSGIFTADLE-IFVIKGAIQLG--------E----WQLNKHSYSFIPAGVRIGSWKVLGGEE 153 (303)
T ss_dssp CTTSCEEEEEEECTTCEECCBEESSCEE-EEEEESEEEET--------T----EEECTTEEEEECTTCCBCCEEEETTSC
T ss_pred CCCCcceEEEEecCCCCCCCcccccceE-EEEEEeEEEeC--------C----EEecCCceEEecCCCccCceeecCCCC
Confidence 4458899999999999999998876678 89999999774 2 579999999999998443 44568888
Q ss_pred EEEEEEE
Q 048097 170 AVAFAGF 176 (224)
Q Consensus 170 a~~l~~~ 176 (224)
+.++..-
T Consensus 154 ~~iL~fe 160 (303)
T 2qdr_A 154 AEILWME 160 (303)
T ss_dssp EEEEEEE
T ss_pred cEEEEEe
Confidence 8888763
No 155
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=94.44 E-value=0.12 Score=47.77 Aligned_cols=58 Identities=10% Similarity=0.083 Sum_probs=45.0
Q ss_pred CCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEEEE
Q 048097 108 NPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAFAG 175 (224)
Q Consensus 108 ~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l~~ 175 (224)
...-.+.+++|++++-+|++.+.- +- ++ ..+++||+++||+|+.+.+.=.+ +++.++.
T Consensus 170 ~~~f~NaDGD~Livpq~G~l~i~T--Ef---G~---L~v~pgei~VIPRGi~frv~l~~--p~Rgyi~ 227 (471)
T 1eyb_A 170 NRCFYNSDGDFLIVPQKGNLLIYT--EF---GK---MLVQPNEICVIQRGMRFSIDVFE--ETRGYIL 227 (471)
T ss_dssp SEEEEESSEEEEEEEEESCEEEEE--TT---EE---EEECTTEEEEECTTCCEEEECSS--SEEEEEE
T ss_pred cceeecCCCCEEEEEEeCCEEEEE--ec---cc---EEeccCCEEEECCccEEEEeeCC--CceEEEE
Confidence 345567789999999999998863 33 34 68999999999999999997655 6655543
No 156
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=94.39 E-value=0.072 Score=49.67 Aligned_cols=68 Identities=16% Similarity=0.110 Sum_probs=51.6
Q ss_pred EEEcC-CCcCCCccCCCCc-EEEEEEecEEEEEEEeCCC----------------------CCCeeEEEEecCCCEEEEc
Q 048097 100 IDYAP-YGQNPPHTHPRAT-EILVVLEGTLYVGFVTSNQ----------------------LNNTLIAKVLNKGDVFVFP 155 (224)
Q Consensus 100 v~l~p-gg~~ppH~Hp~a~-Ei~~Vl~G~~~v~~v~~~~----------------------~~~k~~~~~l~~GDv~v~P 155 (224)
+-+.| |...+.|+.+..+ -+..++.|+=++.+.-+.. ...+.+..++++||++++|
T Consensus 270 ~~mG~~gS~T~~H~D~~~t~~w~~vv~G~K~w~L~PPt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~pGe~lfIP 349 (488)
T 3kv5_D 270 CLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVP 349 (488)
T ss_dssp EEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGSSSCCEEEEEETTCEEEEC
T ss_pred EEEcCCCCCCCeEECCCCCceeeeccCeeEEEEEeCCcccccccccccccCCccchhhhcccccceEEEeeCCCCEEEeC
Confidence 34444 5578999998765 4668999999998875531 0124567899999999999
Q ss_pred CCCeeEEEeCCC
Q 048097 156 IGLIHFQVNIGK 167 (224)
Q Consensus 156 ~G~~H~~~N~G~ 167 (224)
.|..|+..|..+
T Consensus 350 sGWwH~V~nled 361 (488)
T 3kv5_D 350 TGWIHAVLTSQD 361 (488)
T ss_dssp TTCEEEEEEEEE
T ss_pred CCceEEeeCCCC
Confidence 999999999744
No 157
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=94.10 E-value=0.28 Score=42.65 Aligned_cols=91 Identities=20% Similarity=0.215 Sum_probs=62.1
Q ss_pred CeeEEEccccccCcccccc--eEEEEEEEcCCCcCCCccCCCCcEEEEEE-ecEEEEEEEeCCCCCCeeEEEEecCCCEE
Q 048097 76 GFNVTNANVEQIPGLNTLG--TSAVRIDYAPYGQNPPHTHPRATEILVVL-EGTLYVGFVTSNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 76 g~~v~~~~~~~~p~L~~lg--is~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl-~G~~~v~~v~~~~~~~k~~~~~l~~GDv~ 152 (224)
|..|+.+.. .|.+...| +-+....+.|+.-+++|-|.+-+=+.||+ +|+++-. |+.+ ++ .++++||+-
T Consensus 21 G~~v~R~~~--~~~~~~~gpf~~ld~~~~~~~~Gf~~HPHrg~EtVTyvl~~G~~~H~--DS~G--n~---~~i~~GdvQ 91 (290)
T 1j1l_A 21 GARVRRSIG--RPELKNLDPFLLFDEFKGGRPGGFPDHPHRGFETVSYLLEGGSMAHE--DFCG--HT---GKMNPGDLQ 91 (290)
T ss_dssp TEEEEECTT--STTCCCCTTEEEEEEEEECTTCBEEEEEEBSEEEEEEECSSSCEEEE--ETTS--CE---EEECTTCEE
T ss_pred CeEEEEeCC--CccccccCcEEEEEccccCCCCCCCCCCCCCeEEEEEECcceEEEEe--eCCC--Cc---eEECCCcEE
Confidence 455655543 23333333 23444567787778999997544488999 9998775 4442 54 789999999
Q ss_pred EEcC--CCeeEEEeCCCCcEEEEEE
Q 048097 153 VFPI--GLIHFQVNIGKTSAVAFAG 175 (224)
Q Consensus 153 v~P~--G~~H~~~N~G~~~a~~l~~ 175 (224)
+.-+ |+.|.-.|...+++.++-.
T Consensus 92 wMtAG~GI~HsE~~~~~~~~~~lQl 116 (290)
T 1j1l_A 92 WMTAGRGILHAEMPCSEEPAHGLQL 116 (290)
T ss_dssp EEECTTCEEEEEEECSSSCEEEEEE
T ss_pred EEeCCCCEEEEeEcCCCCCEEEEEE
Confidence 9886 6889999987677666443
No 158
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=93.99 E-value=0.13 Score=47.58 Aligned_cols=68 Identities=18% Similarity=0.083 Sum_probs=51.7
Q ss_pred EEcC-CCcCCCccCCCCc-EEEEEEecEEEEEEEeCCCC----------------------CCeeEEEEecCCCEEEEcC
Q 048097 101 DYAP-YGQNPPHTHPRAT-EILVVLEGTLYVGFVTSNQL----------------------NNTLIAKVLNKGDVFVFPI 156 (224)
Q Consensus 101 ~l~p-gg~~ppH~Hp~a~-Ei~~Vl~G~~~v~~v~~~~~----------------------~~k~~~~~l~~GDv~v~P~ 156 (224)
-+.| |...+.|+.+.++ -+..++.|+=+..+.-+... ..+.+..++++||+++||.
T Consensus 201 ~mGp~gS~T~~H~D~~~ts~w~avi~GrK~w~L~PP~~~~~~~y~~~~~s~~q~~~~~p~~~~~~~~v~l~pGE~LfIPs 280 (451)
T 2yu1_A 201 LMSVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNLELYENWLLSGSQGDIFLGDRVSDCQRIELKQGYTFVIPS 280 (451)
T ss_dssp EEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECCCHHHHHHHHHHHHTTCCSSSCHHHHSSCCEEEEECTTCEEEECT
T ss_pred EEccCCCCCCeEECCCCcchhhheecceEEEEEeCCCcccccccccccccccchhhhhccccccceEEEECCCcEEEeCC
Confidence 3444 5567999998755 56789999998888755410 0235678899999999999
Q ss_pred CCeeEEEeCCCC
Q 048097 157 GLIHFQVNIGKT 168 (224)
Q Consensus 157 G~~H~~~N~G~~ 168 (224)
|..|...|..+.
T Consensus 281 GWwH~V~nleds 292 (451)
T 2yu1_A 281 GWIHAVYTPTDT 292 (451)
T ss_dssp TCEEEEECSSCE
T ss_pred CceEEEecCCCe
Confidence 999999997654
No 159
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=93.92 E-value=0.15 Score=46.97 Aligned_cols=69 Identities=14% Similarity=0.107 Sum_probs=51.7
Q ss_pred EEEcC-CCcCCCccCCCCc-EEEEEEecEEEEEEEeCCCC----------------------CCeeEEEEecCCCEEEEc
Q 048097 100 IDYAP-YGQNPPHTHPRAT-EILVVLEGTLYVGFVTSNQL----------------------NNTLIAKVLNKGDVFVFP 155 (224)
Q Consensus 100 v~l~p-gg~~ppH~Hp~a~-Ei~~Vl~G~~~v~~v~~~~~----------------------~~k~~~~~l~~GDv~v~P 155 (224)
+-+.| |+..+.|..+.++ -+..+++|+=+..+.-+... ..+.+..++++||++++|
T Consensus 235 ~~mG~~gS~T~~HiD~~~ts~w~~vi~GrK~w~L~PPt~~nl~~~~~~~~s~~~~~~~~~~~~~~~~~v~l~pGetlfIP 314 (447)
T 3kv4_A 235 CLMSVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIP 314 (447)
T ss_dssp EEEECTTEEEEEECCGGGCEEEEEEEESEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGGSSCCEEEEEETTCEEEEC
T ss_pred EEEeCCCCCCCeeECCCCCceeEEEeeeEEEEEEeCCCcccccchhhcccCcchhhhhccccccceEEEEECCCcEEecC
Confidence 34444 4467899988765 46779999998888755310 123467899999999999
Q ss_pred CCCeeEEEeCCCC
Q 048097 156 IGLIHFQVNIGKT 168 (224)
Q Consensus 156 ~G~~H~~~N~G~~ 168 (224)
.|..|+..|..+.
T Consensus 315 sGWwH~V~nleds 327 (447)
T 3kv4_A 315 TGWIHAVLTPVDC 327 (447)
T ss_dssp TTCEEEEEESSCE
T ss_pred CCCeEEEecCCCE
Confidence 9999999998554
No 160
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=93.48 E-value=0.13 Score=46.28 Aligned_cols=68 Identities=15% Similarity=0.122 Sum_probs=51.4
Q ss_pred EEEcC-CCcCCCccCCCCcE-EEEEEecEEEEEEEeCCCC----------------------CCeeEEEEecCCCEEEEc
Q 048097 100 IDYAP-YGQNPPHTHPRATE-ILVVLEGTLYVGFVTSNQL----------------------NNTLIAKVLNKGDVFVFP 155 (224)
Q Consensus 100 v~l~p-gg~~ppH~Hp~a~E-i~~Vl~G~~~v~~v~~~~~----------------------~~k~~~~~l~~GDv~v~P 155 (224)
+-+.| |+..+.|+.+.++= +..+++|+=+..+.-+... ..+.+..++++||++++|
T Consensus 151 l~mGp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtLfIP 230 (371)
T 3k3o_A 151 CLMSVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIP 230 (371)
T ss_dssp EEEECTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSTTGGGSCGGGTSSCCEEEEEETTCEEEEC
T ss_pred EEEcCCCCCCCeEECCCCCceeEEEeeeEEEEEEECCCccccccccccccCCccchhhcccccCceEEEEECCCcEEEeC
Confidence 44444 55789999987664 5679999998888754310 124567899999999999
Q ss_pred CCCeeEEEeCCC
Q 048097 156 IGLIHFQVNIGK 167 (224)
Q Consensus 156 ~G~~H~~~N~G~ 167 (224)
.|..|+..|..+
T Consensus 231 sGWwH~V~nled 242 (371)
T 3k3o_A 231 TGWIHAVLTPVD 242 (371)
T ss_dssp TTCEEEEEEEEE
T ss_pred CCCeEEEecCCC
Confidence 999999999744
No 161
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=93.02 E-value=0.19 Score=45.68 Aligned_cols=68 Identities=16% Similarity=0.106 Sum_probs=51.5
Q ss_pred EEEcC-CCcCCCccCCCCc-EEEEEEecEEEEEEEeCCCC----------------------CCeeEEEEecCCCEEEEc
Q 048097 100 IDYAP-YGQNPPHTHPRAT-EILVVLEGTLYVGFVTSNQL----------------------NNTLIAKVLNKGDVFVFP 155 (224)
Q Consensus 100 v~l~p-gg~~ppH~Hp~a~-Ei~~Vl~G~~~v~~v~~~~~----------------------~~k~~~~~l~~GDv~v~P 155 (224)
+-+.| |...+.|+.+.++ -+..+++|+=+..+..+... ..+.+..++++||++++|
T Consensus 179 l~mGp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~ly~~~~~s~~~~e~~~~~~~~~~~~v~l~pGe~lfIP 258 (397)
T 3kv9_A 179 CLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVP 258 (397)
T ss_dssp EEEECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSGGGGGSCGGGGSSCCEEEEEETTCEEEEC
T ss_pred EEEcCCCCCCCEEECCCCCceeeeecCceEEEEEeCCcccccccccccccCCCcchhhhccccCceEEEEECCCCEEEeC
Confidence 44545 5567889998766 46689999998888755310 124567899999999999
Q ss_pred CCCeeEEEeCCC
Q 048097 156 IGLIHFQVNIGK 167 (224)
Q Consensus 156 ~G~~H~~~N~G~ 167 (224)
.|..|+..|..+
T Consensus 259 sGW~H~V~nled 270 (397)
T 3kv9_A 259 TGWIHAVLTSQD 270 (397)
T ss_dssp TTCEEEEEEEEE
T ss_pred CCCeEEccCCcC
Confidence 999999999743
No 162
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=92.45 E-value=0.25 Score=44.79 Aligned_cols=65 Identities=12% Similarity=0.134 Sum_probs=50.1
Q ss_pred cCCCcCCCccCCCCc-EEEEEEecEEEEEEEeCCCC----------------------CCeeEEEEecCCCEEEEcCCCe
Q 048097 103 APYGQNPPHTHPRAT-EILVVLEGTLYVGFVTSNQL----------------------NNTLIAKVLNKGDVFVFPIGLI 159 (224)
Q Consensus 103 ~pgg~~ppH~Hp~a~-Ei~~Vl~G~~~v~~v~~~~~----------------------~~k~~~~~l~~GDv~v~P~G~~ 159 (224)
..|.....|..+.++ -+..+++|+=+..+..+... ..+.+..++++||++++|.|..
T Consensus 182 p~gS~T~fHiD~~gTs~w~~vi~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtlfIPsGWw 261 (392)
T 3pua_A 182 VKDSYTDFHIDSGGASAWYHVLKGEKTFYLIRPASANISLYERWRSASNHSEMFFADQVDKCYKCIVKQGQTLFIPSGWI 261 (392)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSTTGGGSCGGGGSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCEeECCCCCceeeeeccceEEEEEECCCcccccchhhcccCcchhhhhhcccccceEEEEECCCcEEeeCCCce
Confidence 445578999998765 56789999998888754310 1234678999999999999999
Q ss_pred eEEEeCCC
Q 048097 160 HFQVNIGK 167 (224)
Q Consensus 160 H~~~N~G~ 167 (224)
|+..|..+
T Consensus 262 H~V~nled 269 (392)
T 3pua_A 262 YATLTPVD 269 (392)
T ss_dssp EEEEEEEE
T ss_pred EEEecCCC
Confidence 99999744
No 163
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=92.22 E-value=0.41 Score=41.51 Aligned_cols=52 Identities=17% Similarity=0.082 Sum_probs=39.3
Q ss_pred EcCCCcC-CCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEe
Q 048097 102 YAPYGQN-PPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVN 164 (224)
Q Consensus 102 l~pgg~~-ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N 164 (224)
+.+|... ..-. ..-|++++||+..|.+. ++ ++.|++||++.||++..|.+.-
T Consensus 214 ~G~Ges~~~~~~---~d~wiWqLEGss~Vt~~------~q--~~~L~~~DsLLIpa~~~y~~~r 266 (286)
T 2qnk_A 214 YGQGSSEGLRQN---VDVWLWQLEGSSVVTMG------GR--RLSLAPDDSLLVLAGTSYAWER 266 (286)
T ss_dssp ECSEEEEECCCS---SCEEEEEEESCEEEEET------TE--EEEECTTEEEEECTTCCEEEEE
T ss_pred EcCCccccccCc---CcEEEEEEcCceEEEEC------Ce--EEeccCCCEEEecCCCeEEEEe
Confidence 6666542 2222 26899999999988763 33 5899999999999999998865
No 164
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=92.07 E-value=0.81 Score=33.23 Aligned_cols=44 Identities=20% Similarity=0.138 Sum_probs=36.6
Q ss_pred CCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEe
Q 048097 115 RATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVN 164 (224)
Q Consensus 115 ~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N 164 (224)
.+.|++-|++|++++.+-+++ . ++.+++||.|.+|++.---++-
T Consensus 40 ~~~E~M~vvsG~~~V~lpg~~----e--w~~~~aGesF~Vpans~F~l~v 83 (94)
T 2oyz_A 40 QAPERMTVVKGALVVKRVGEA----D--WTTYSSGESFDVEGNSSFELQV 83 (94)
T ss_dssp SSCEEEEEEESEEEEEETTCS----S--CEEEETTCEEEECSSEEEEEEE
T ss_pred CCeEEEEEEEeEEEEEcCCCC----c--CEEECCCCEEEECCCCEEEEEE
Confidence 378999999999999986442 2 5899999999999998777665
No 165
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=91.69 E-value=0.59 Score=38.58 Aligned_cols=80 Identities=18% Similarity=0.159 Sum_probs=44.9
Q ss_pred EEEEEEcCCCcCCCccCCCCc--EEEEEEe--cEEEEEEEeCCCC----------C-----CeeEEEEecCCCEEEEcCC
Q 048097 97 AVRIDYAPYGQNPPHTHPRAT--EILVVLE--GTLYVGFVTSNQL----------N-----NTLIAKVLNKGDVFVFPIG 157 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~--Ei~~Vl~--G~~~v~~v~~~~~----------~-----~k~~~~~l~~GDv~v~P~G 157 (224)
.-...+.+|+...+|.|+++. =++|+-. +.+.+.|.++... + .......-++||+++||..
T Consensus 105 ~W~~~~~~G~~~~~H~H~~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvlFpS~ 184 (216)
T 2rg4_A 105 IWINILPEGGVHGSHIHPHSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLWESW 184 (216)
T ss_dssp EEEEEECTTCCEEEECCTTCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEEEETT
T ss_pred EEEEEcCCCCcccCccCCCCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCCeEEEECCC
Confidence 444667899999999998632 1122211 1122223332100 0 1112345699999999999
Q ss_pred CeeEEEe-CCCCcEEEEEEEe
Q 048097 158 LIHFQVN-IGKTSAVAFAGFS 177 (224)
Q Consensus 158 ~~H~~~N-~G~~~a~~l~~~~ 177 (224)
+.|...- .++++-+-+ +||
T Consensus 185 l~H~V~p~~~~~~RiSI-sFN 204 (216)
T 2rg4_A 185 LRHEVPMNMAEEDRISV-SFN 204 (216)
T ss_dssp SCEEECCCCSSSCEEEE-EEE
T ss_pred CEEeccCCCCCCCEEEE-EEE
Confidence 9999863 344443333 454
No 166
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=91.37 E-value=2 Score=37.13 Aligned_cols=81 Identities=19% Similarity=0.206 Sum_probs=53.1
Q ss_pred ceEEEEEEEcCCCc---CCCccCCCCcEEEEEEe----cEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCC
Q 048097 94 GTSAVRIDYAPYGQ---NPPHTHPRATEILVVLE----GTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIG 166 (224)
Q Consensus 94 gis~~~v~l~pgg~---~ppH~Hp~a~Ei~~Vl~----G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G 166 (224)
.+-+....+.|||. .|||.|.+..|-.|--+ |.+ +.++.+. ++.+...++-||++++|...+|.. .|
T Consensus 179 qllmg~evltpgg~WSSyPpHkHDrr~EeyyYF~l~~~gfv-~q~~g~p---~Etrhi~V~n~daVlvP~wh~h~~--~G 252 (282)
T 1xru_A 179 QLSMGLTELAPGNLWNTMPCHTHERRMEVYFYFNMDDDACV-FHMMGQP---QETRHIVMHNEQAVISPSWSIHSG--VG 252 (282)
T ss_dssp SCEEEEEEECTTCCEESCSEEECTTEEEEEEEESCCTTCCE-EEEEEET---TEEEEEEECSSEEEEECTTCEEEE--EE
T ss_pred hEEEEEEEEeCCCCcCCCCCccCCCCceEEEEEEeCCCCEE-EEEeCCC---CCeeEEEEECCCEEEeCCCCCCCC--CC
Confidence 45677778889883 69999987777666543 333 2333332 343445789999999997677774 46
Q ss_pred CCcEEEEEEEeCCC
Q 048097 167 KTSAVAFAGFSSQF 180 (224)
Q Consensus 167 ~~~a~~l~~~~s~~ 180 (224)
.+.-.+|.+.-.+|
T Consensus 253 ~~~Y~ylwvMAG~n 266 (282)
T 1xru_A 253 TKAYTFIWGMVGEN 266 (282)
T ss_dssp SSCCEEEEEEEESC
T ss_pred ccceEEEEEEEcCC
Confidence 66655655654443
No 167
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=90.89 E-value=0.3 Score=45.80 Aligned_cols=67 Identities=15% Similarity=0.144 Sum_probs=50.2
Q ss_pred EEcC-CCcCCCccCCCCc-EEEEEEecEEEEEEEeCCC-------------C---------CCeeEEEEecCCCEEEEcC
Q 048097 101 DYAP-YGQNPPHTHPRAT-EILVVLEGTLYVGFVTSNQ-------------L---------NNTLIAKVLNKGDVFVFPI 156 (224)
Q Consensus 101 ~l~p-gg~~ppH~Hp~a~-Ei~~Vl~G~~~v~~v~~~~-------------~---------~~k~~~~~l~~GDv~v~P~ 156 (224)
-+.| |....+|.-+.++ -+.+|++|+=+..+.-+.. . ..+.+..++++||++++|.
T Consensus 301 lmg~~gS~Td~HiD~~gts~w~~v~~GrK~w~L~PPt~~nl~~y~~w~~s~~~~~wfgd~l~~~~~~v~l~pGEtlfIPs 380 (528)
T 3pur_A 301 LAGMAGSYTDFHVDFGGSSVYYHILKGEKIFYIAAPTEQNFAAYQAHETSPDTTTWFGDIANGAVKRVVIKEGQTLLIPA 380 (528)
T ss_dssp EEECTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSSCCSCCGGGGTTTCCEEEEEETTCEEEECT
T ss_pred EEeCCCCCCCeeECCCCCceeEEEecceEEEEEeCCCccchhhhhhhccCCchhhhhcccccccEEEEEECCCCEEEecC
Confidence 3444 4567889888665 5777999999888876531 0 1234567999999999999
Q ss_pred CCeeEEEeCCC
Q 048097 157 GLIHFQVNIGK 167 (224)
Q Consensus 157 G~~H~~~N~G~ 167 (224)
|.+|+..|..+
T Consensus 381 GW~HaV~tleD 391 (528)
T 3pur_A 381 GWIHAVLTPVD 391 (528)
T ss_dssp TCEEEEEEEEE
T ss_pred CceEEEecCCC
Confidence 99999999743
No 168
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=89.88 E-value=1.2 Score=40.82 Aligned_cols=76 Identities=12% Similarity=0.141 Sum_probs=48.0
Q ss_pred ceEEEEEEEc--CCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCC-eeEEEEecCCCEEEEcCCCeeEEEeC---CC
Q 048097 94 GTSAVRIDYA--PYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNN-TLIAKVLNKGDVFVFPIGLIHFQVNI---GK 167 (224)
Q Consensus 94 gis~~~v~l~--pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~-k~~~~~l~~GDv~v~P~G~~H~~~N~---G~ 167 (224)
.+++.++++. +++... ........+++|++|++++.... . +. ...|++||++++|.+..-.+.+. +.
T Consensus 356 eF~v~~~~~~~~~~~~~~-~~~~~~~~illv~~G~g~i~~~~-----~~~~-~~~l~~G~~~fvpa~~~~~i~g~~~~~~ 428 (440)
T 1pmi_A 356 EFSVLQTIFDKSKGGKQV-IEGLNGPSIVIATNGKGTIQITG-----DDST-KQKIDTGYVFFVAPGSSIELTADSANQD 428 (440)
T ss_dssp SCEEEEEECCTTTCCEEE-ECCCSSCEEEEEEESEEEEEETT-----CGGG-CEEEETTCEEEECTTCCEEEEECSSCCS
T ss_pred eEEEEEEEecCCCCceeE-EecCCCcEEEEEEeCeEEEEeCC-----cccc-eEEeccCCEEEEeCCCcEEEEEecccCC
Confidence 4788888887 342211 11123678999999999986421 2 10 04799999999999843334444 24
Q ss_pred CcEEEEEEE
Q 048097 168 TSAVAFAGF 176 (224)
Q Consensus 168 ~~a~~l~~~ 176 (224)
+.+.++.++
T Consensus 429 ~~~~~~~a~ 437 (440)
T 1pmi_A 429 QDFTTYRAF 437 (440)
T ss_dssp SCCEEEEEE
T ss_pred CcEEEEEEE
Confidence 456666555
No 169
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=89.87 E-value=1.8 Score=32.31 Aligned_cols=66 Identities=14% Similarity=0.172 Sum_probs=46.4
Q ss_pred EcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEEEEE
Q 048097 102 YAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAFAGF 176 (224)
Q Consensus 102 l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l~~~ 176 (224)
+.|| ..|.+..-.+.|+.-|++|++++.+-+++ . ++.+++|+.|.+|.+.-.-++-. ++...++.|
T Consensus 44 m~PG-e~~YtF~T~~~E~MevvsG~l~V~Lpg~~----e--W~~~~aGesF~VpanssF~lkv~--~~~~Y~C~y 109 (111)
T 3hqx_A 44 ILPT-EQPLTFETHVPERMEIISGECRVKIADST----E--SELFRAGQSFYVPGNSLFKIETD--EVLDYVCHL 109 (111)
T ss_dssp ECCC-SSCEEEECSSCEEEEEEESEEEEEETTCS----S--CEEEETTCEEEECTTCEEEEECS--SCEEEEEEE
T ss_pred Eecc-ccceEEcCCCcEEEEEEEeEEEEEcCCcc----c--CEEeCCCCEEEECCCCcEEEEEC--cceeEEEEc
Confidence 4565 22234444578999999999999986543 2 68999999999999988777643 344444433
No 170
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=89.03 E-value=1.8 Score=37.49 Aligned_cols=81 Identities=16% Similarity=0.149 Sum_probs=44.7
Q ss_pred ceEEEEEEEcCCCc---CCCccCCCCcEEEEEEe----cEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCC
Q 048097 94 GTSAVRIDYAPYGQ---NPPHTHPRATEILVVLE----GTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIG 166 (224)
Q Consensus 94 gis~~~v~l~pgg~---~ppH~Hp~a~Ei~~Vl~----G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G 166 (224)
.+-+....+.|||. -|||.|.+..|..|--+ |.+ +.+..+- ++.+...++-||++++|+|..|.- .|
T Consensus 179 qllmg~evltpGg~WSSyPpHkHDrr~E~yyYF~l~p~~~v-~h~~g~p---dEtrh~~V~n~daVlvP~wgyHp~--~G 252 (289)
T 1ywk_A 179 QLQMGYTILEPGSAWNTMPCHTHERRMEAYVYFDMEEDTRI-FHMMGKP---DETKHLVMSNEQAAISPSWSIHSG--VG 252 (289)
T ss_dssp SCEEEEEEECTTCCCCC--------CEEEEEEESCCTTCCE-EEEESST---TSCEEEEECTTEEEEECTTSCCCE--EE
T ss_pred eEEEEEEEEeCCCCcCCCCCccCCCCCeeEEEEEeCCCCeE-EEECCCC---CceEEEEEECCCEEEeCCCcccCC--CC
Confidence 45677778888884 59999997777776433 222 2222222 344456789999999999989962 44
Q ss_pred CCcEEEEEEEeCCC
Q 048097 167 KTSAVAFAGFSSQF 180 (224)
Q Consensus 167 ~~~a~~l~~~~s~~ 180 (224)
...-.+|.+...+|
T Consensus 253 t~~Y~ylwvMAG~n 266 (289)
T 1ywk_A 253 TSNYSFIWAMCGEN 266 (289)
T ss_dssp SSCCEEEEEEECC-
T ss_pred CcCeEEEEEEEcCC
Confidence 44444666655443
No 171
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=88.64 E-value=1.8 Score=37.87 Aligned_cols=58 Identities=22% Similarity=0.322 Sum_probs=41.7
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEE
Q 048097 94 GTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQ 162 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~ 162 (224)
-+++.++++.++... ...+...+++|++|++++.. + ++ ...|++||.+++|++.-.+.
T Consensus 250 ~F~~~~~~~~~~~~~---~~~~~~~il~v~~G~~~l~~---~---~~--~~~l~~G~~~~vpa~~~~~~ 307 (319)
T 1qwr_A 250 YFSVYKWDINGEAEM---AQDESFLICSVIEGSGLLKY---E---DK--TCPLKKGDHFILPAQMPDFT 307 (319)
T ss_dssp SCEEEEEEEEEEEEE---CCCSSCEEEEEEEEEEEEEE---T---TE--EEEEETTCEEEECTTCCCEE
T ss_pred EEEEEEEEECCceEE---ccCCccEEEEEEcCeEEEEE---C---CE--EEEEcCCcEEEEeCCCceEE
Confidence 467788888754322 22346799999999998864 2 23 46899999999999875444
No 172
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=87.70 E-value=0.71 Score=41.69 Aligned_cols=58 Identities=16% Similarity=0.095 Sum_probs=41.4
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEE
Q 048097 94 GTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQ 162 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~ 162 (224)
.+++.++++.++... ..+ ++..+++|++|++++.. . ++ +..|++||++++|++...+.
T Consensus 323 ~F~v~~~~l~~~~~~--~~~-~~~~il~v~~G~~~l~~--~----~~--~~~l~~G~~~fvpa~~~~~~ 380 (394)
T 2wfp_A 323 DFAFSLHDLALQETS--IGQ-HSAAILFCVEGEAVLRK--D----EQ--RLVLKPGESAFIGADESPVN 380 (394)
T ss_dssp SCEEEEEECCSSCEE--ECC-SSCEEEEEEEEEEEEEE--T----TE--EEEECTTCEEEECGGGCCEE
T ss_pred EEEEEEEEEcCCeEE--ecC-CCcEEEEEEeceEEEEE--C----Ce--EEEEccCcEEEEeCCCceEE
Confidence 578888888755321 133 46799999999998753 1 22 46899999999999864443
No 173
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=87.60 E-value=3.1 Score=31.42 Aligned_cols=70 Identities=19% Similarity=0.091 Sum_probs=45.6
Q ss_pred CcCCCccCCCC-cEEEEEEecEEEEEEEeCCCCCC-e-eEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEEEEEeCC
Q 048097 106 GQNPPHTHPRA-TEILVVLEGTLYVGFVTSNQLNN-T-LIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAFAGFSSQ 179 (224)
Q Consensus 106 g~~ppH~Hp~a-~Ei~~Vl~G~~~v~~v~~~~~~~-k-~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l~~~~s~ 179 (224)
++...|.-..+ -..+.|++|++.+...++++ . . .....+.+|+..++|+...|.+.- .+++.+..-|-.+
T Consensus 27 ~l~~~HnTK~GtWgkL~Vl~G~Lkf~~~~e~~--~~~~~~~~~~~~~~~~~i~Pq~wHrVe~--sdD~~f~leFyc~ 99 (119)
T 3dl3_A 27 ALLTHHNTAVDVFGQICVMEGVVTYYGFANSE--ATEPEIKVVINAGQFATSPPQYWHRIEL--SDDAQFNINFWSD 99 (119)
T ss_dssp HHHSSBCCCTTEEEEEEEEESEEEEEEESSTT--CCSCSEEEEEETTEEEEECTTCEEEEEE--CTTCEEEEEEEEC
T ss_pred HHHhccCCCCcEEEEEEEEEeEEEEEEEcCCC--CCcccEEEEeCCCCCceeCCCceEEEEE--CCCeEEEEEEEEC
Confidence 34555643322 35677999999998655431 2 1 124578999999999999999993 3345554455433
No 174
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=87.36 E-value=3.4 Score=34.68 Aligned_cols=67 Identities=7% Similarity=-0.036 Sum_probs=46.5
Q ss_pred cceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEE
Q 048097 93 LGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVA 172 (224)
Q Consensus 93 lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~ 172 (224)
..+.+..+.+++|+....-..+.-.-++||++|++++. + ..|.+||.+++..+..=.+.+ .+++.+
T Consensus 158 ~~~~~~~~~l~~g~~~~~~~~~~~~~~~~v~~G~v~v~--------g----~~l~~gd~~~~~~~~~l~l~a--~~~a~~ 223 (242)
T 1tq5_A 158 QDMELYRWALLKDEQSVHQIAAERRVWIQVVKGNVTIN--------G----VKASTSDGLAIWDEQAISIHA--DSDSEV 223 (242)
T ss_dssp SSCEEEEEEECTTCEEEECCCTTCEEEEEEEESEEEET--------T----EEEETTCEEEEESCSCEEEEE--SSSEEE
T ss_pred CCCEEEEEEECCCCEEEeecCCCcEEEEEEccCcEEEC--------C----EEeCCCCEEEECCCCeEEEEe--CCCCEE
Confidence 36889999999999763333444456799999999772 2 368999999998765333444 244554
Q ss_pred E
Q 048097 173 F 173 (224)
Q Consensus 173 l 173 (224)
+
T Consensus 224 L 224 (242)
T 1tq5_A 224 L 224 (242)
T ss_dssp E
T ss_pred E
Confidence 4
No 175
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=86.08 E-value=1.5 Score=32.54 Aligned_cols=47 Identities=23% Similarity=0.247 Sum_probs=37.3
Q ss_pred cCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEe
Q 048097 112 THPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVN 164 (224)
Q Consensus 112 ~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N 164 (224)
..-.+.|++-|++|++++.+-+++ . ++.+++|+.|.+|.+.-.-++-
T Consensus 50 F~T~~~E~MevvsG~l~V~LpG~~----e--W~~~~aGesF~VpanssF~lkv 96 (106)
T 3eo6_A 50 LSSEVAETIRVLSGMAYYHAEGAN----D--VQELHAGDSMVIPANQSYRLEV 96 (106)
T ss_dssp ECCSSCEEEEEEEEEEEEECTTCS----S--CEEEETTCEEEECSSSCEEEEE
T ss_pred ecCCCcEEEEEEEeEEEEECCCCc----c--CEEECCCCEEEECCCCcEEEEE
Confidence 334478999999999999875432 2 5899999999999998766653
No 176
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=84.90 E-value=2.3 Score=30.90 Aligned_cols=53 Identities=11% Similarity=0.120 Sum_probs=37.6
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEE
Q 048097 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~ 152 (224)
+....+++|..+-..=. .+..+.+|++|.+.+...++++ .+.....+.+||++
T Consensus 28 ~~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~~~~g--~~~~~~~~~~g~~~ 80 (149)
T 2pqq_A 28 MSEVTLARGDTLFHEGD-PGDRLYVVTEGKVKLHRTSPDG--RENMLAVVGPSELI 80 (149)
T ss_dssp CEEEEECTTCEEECTTS-EECEEEEEEESCEEEEEECTTS--SEEEEEEECTTCEE
T ss_pred ceEEEeCCCCEEECCCC-CCCeEEEEEecEEEEEEECCCC--cEEEEEEcCCcCEe
Confidence 34677888886532212 2578999999999998776652 45555788999987
No 177
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=84.06 E-value=4.8 Score=34.81 Aligned_cols=57 Identities=18% Similarity=0.212 Sum_probs=40.7
Q ss_pred ceEEEEEEEcCCCcCCCccCCCCc-EEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEE
Q 048097 94 GTSAVRIDYAPYGQNPPHTHPRAT-EILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQV 163 (224)
Q Consensus 94 gis~~~v~l~pgg~~ppH~Hp~a~-Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~ 163 (224)
-+++.++++.+.... .. ++. .+++|++| +++.. . ++ ...|++||.+++|++.-.+..
T Consensus 229 ~F~v~~~~~~~~~~~---~~-~~~~~il~v~~G-~~i~~--~----~~--~~~l~~G~~~~ipa~~~~~~i 286 (300)
T 1zx5_A 229 NFGLEVVDVTGTAEI---KT-GGVMNILYAAEG-YFILR--G----KE--TADLHRGYSCLVPASTDSFTV 286 (300)
T ss_dssp SEEEEEEEEEEEEEE---EC-CSBCEEEEEEES-CEEEE--S----SS--EEEECTTCEEEECTTCCEEEE
T ss_pred eEEEEEEEECCceEE---ec-CCceEEEEEccc-EEEEe--C----Ce--EEEEccceEEEEeCCCceEEE
Confidence 467888888743222 23 467 89999999 88764 2 22 368999999999998865544
No 178
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=83.72 E-value=1.2 Score=40.33 Aligned_cols=42 Identities=21% Similarity=0.185 Sum_probs=32.1
Q ss_pred CeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEEEEEeCCC
Q 048097 139 NTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAFAGFSSQF 180 (224)
Q Consensus 139 ~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l~~~~s~~ 180 (224)
-+.++..-++||.++||+|.+|...|..+.-.+..-.++.++
T Consensus 290 v~~~~~~Q~~GeavfiPaG~~HQV~Nl~~~i~va~df~spe~ 331 (392)
T 2ypd_A 290 VRTCTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPEH 331 (392)
T ss_dssp CCCEEEEEETTCEEEECTTCEEEEEESSEEEEEEEEECCGGG
T ss_pred CeeEEEEEcCCCEEEecCCCHHHHhcccchhhHhhhhcChhh
Confidence 455778889999999999999999999865555554444433
No 179
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=82.52 E-value=7.3 Score=32.95 Aligned_cols=71 Identities=14% Similarity=-0.024 Sum_probs=47.1
Q ss_pred cceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEE
Q 048097 93 LGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVA 172 (224)
Q Consensus 93 lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~ 172 (224)
..+.+..+.+++|........+.. -++||++|++++. +.+ .. ...|.+||.+++-.+..=.+.. .+++.+
T Consensus 180 ~~~~~~~~~L~~g~~~~~~~~~~~-~~l~v~~G~v~v~--g~~---~~--~~~l~~gd~~~l~~~~~l~l~a--~~~a~~ 249 (256)
T 2vec_A 180 QQVWLHHIVLDKGESANFQLHGPR-AYLQSIHGKFHAL--THH---EE--KAALTCGDGAFIRDEANITLVA--DSPLRA 249 (256)
T ss_dssp SSCEEEEEEECTTCEEEEECSSSE-EEEEEEESCEEEE--ETT---EE--EEEECTTCEEEEESCSEEEEEE--SSSEEE
T ss_pred CCcEEEEEEECCCCEEEEecCCCe-EEEEEEECEEEEC--Ccc---cc--ceEECCCCEEEECCCCeEEEEe--CCCCEE
Confidence 468889999999997644444433 7899999999874 211 11 2579999999997664333333 244544
Q ss_pred E
Q 048097 173 F 173 (224)
Q Consensus 173 l 173 (224)
+
T Consensus 250 L 250 (256)
T 2vec_A 250 L 250 (256)
T ss_dssp E
T ss_pred E
Confidence 4
No 180
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=82.52 E-value=4.5 Score=31.05 Aligned_cols=52 Identities=8% Similarity=-0.085 Sum_probs=38.1
Q ss_pred EEEEEcCCCcC-CCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEE
Q 048097 98 VRIDYAPYGQN-PPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFV 153 (224)
Q Consensus 98 ~~v~l~pgg~~-ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v 153 (224)
....+++|..+ ...- .+..+.+|++|.+.+...++++ .+.....+.+||++-
T Consensus 31 ~~~~~~~g~~l~~~G~--~~~~~y~i~~G~v~~~~~~~~G--~e~~~~~~~~g~~~g 83 (194)
T 3dn7_A 31 QLKKVRKKETLLKTGE--ICRINYFVVKGCLRLFFIDEKG--IEQTTQFAIENWWLS 83 (194)
T ss_dssp EEEEECTTCEEECTTS--BCCEEEEEEESEEEEEEECTTS--CEEEEEEEETTCEEC
T ss_pred EEEEEcCCCEEECCCC--eeeEEEEeecCeEEEEEECCCC--CEEEEEEccCCcEEe
Confidence 45677888754 3332 2578999999999998877663 455556789999995
No 181
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=82.48 E-value=2.3 Score=30.69 Aligned_cols=53 Identities=11% Similarity=0.213 Sum_probs=33.4
Q ss_pred EEEEEEcCCCcC-CCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeE---EEEecCCCEEE
Q 048097 97 AVRIDYAPYGQN-PPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLI---AKVLNKGDVFV 153 (224)
Q Consensus 97 ~~~v~l~pgg~~-ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~---~~~l~~GDv~v 153 (224)
+....+++|..+ ... ..+..+.+|++|++.+...++++ .+.. ...+.+||++=
T Consensus 29 ~~~~~~~~g~~i~~~g--~~~~~~y~i~~G~v~~~~~~~~g--~~~~~~~~~~~~~G~~fG 85 (142)
T 3mdp_A 29 SEEKSFPTGSVIFKEN--SKADNLMLLLEGGVELFYSNGGA--GSAANSTVCSVVPGAIFG 85 (142)
T ss_dssp EEEEEECTTCEEECTT--SBCCEEEEEEESCEEEECC-----------CEEEEECTTCEEC
T ss_pred hcEEecCCCCEEEeCC--CCCCcEEEEEeCEEEEEEECCCC--CceEeeeEEEecCCCEec
Confidence 456778888854 333 23679999999999987655542 3334 46789999884
No 182
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=82.32 E-value=5.6 Score=34.00 Aligned_cols=55 Identities=16% Similarity=0.184 Sum_probs=41.2
Q ss_pred cceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcC-C
Q 048097 93 LGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPI-G 157 (224)
Q Consensus 93 lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~-G 157 (224)
..+.+..+.+++|........+...-++||++|++++. . +. ..|.+||..++.. |
T Consensus 165 ~~~~~~~~~L~~g~~~~~~~~~~~~~~lyv~~G~v~v~---g----~~---~~l~~~d~~~~~~~~ 220 (277)
T 2p17_A 165 VPVTMVEMIVEPGTTVVQDLPGHYNGFLYILEGSGVFG---A----DN---IEGKAGQALFFSRHN 220 (277)
T ss_dssp SCEEEEEEEECTTCEEEEEEETTCEEEEEEEESEEEET---T----TT---EEEETTEEEEECCCC
T ss_pred CCCEEEEEEECCCCEEEeccCCCCEEEEEEEeCeEEEC---C----Cc---eEeCCCcEEEEcCCC
Confidence 47889999999999765444333457899999998772 1 11 4699999999986 5
No 183
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=82.00 E-value=4.8 Score=31.13 Aligned_cols=53 Identities=19% Similarity=0.298 Sum_probs=37.3
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEE
Q 048097 98 VRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFV 153 (224)
Q Consensus 98 ~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v 153 (224)
....+++|..+-.- ......+.+|++|.+.+...++++ .+.....+.+||++-
T Consensus 14 ~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~~~~~G--~~~~~~~~~~g~~~G 66 (207)
T 2oz6_A 14 HRRRYTAKSTIIYA-GDRCETLFFIIKGSVTILIEDDDG--REMIIGYLNSGDFFG 66 (207)
T ss_dssp EEEEECTTCEEECT-TSBCCEEEEEEESEEEEEEECTTS--CEEEEEEEETTCEES
T ss_pred ceEEECCCCEEEcC-CCCCCeEEEEEeCEEEEEEECCCC--CEEEEEEcCCCCCcc
Confidence 34667788765221 223578999999999998777652 455567889999984
No 184
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=81.09 E-value=4.4 Score=31.56 Aligned_cols=118 Identities=13% Similarity=0.011 Sum_probs=70.6
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEc-----CCCeeEEEeCCCCcEEE
Q 048097 98 VRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFP-----IGLIHFQVNIGKTSAVA 172 (224)
Q Consensus 98 ~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P-----~G~~H~~~N~G~~~a~~ 172 (224)
....+++|..+-..=. ....+.+|++|.+.+...++++ .+.....+.+||++-.. .-..+.... .++..+
T Consensus 23 ~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~~~~g--~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a--~~~~~v 97 (216)
T 4ev0_A 23 QRRLYPQGKPIFYQGD-LGQALYLVASGKVRLFRTHLGG--QERTLALLGPGELFGEMSLLDEGERSASAVA--VEDTEL 97 (216)
T ss_dssp EEEEECTTCEEECTTC-BCCEEEEEEESCEEEEEECSSS--CEEEEEEECTTCEECHHHHHHCCBCSSEEEE--SSSEEE
T ss_pred eEEEeCCCCEEEeCCC-CCCEEEEEEeCEEEEEEECCCC--CEEEEEEecCCCEEeehhhcCCCCcceEEEE--cCCEEE
Confidence 4567788876533222 2578999999999998876652 44556789999998421 112233333 334444
Q ss_pred EEEEeC--------CCCceee----------------------------chhhhh---cC----CCCCCHHHHHhhcCCC
Q 048097 173 FAGFSS--------QFPGVIT----------------------------IADTVF---GA----NPPINPDFLGKAFQLD 209 (224)
Q Consensus 173 l~~~~s--------~~pg~~~----------------------------~~~~lf---~~----~p~~p~~vLa~af~~~ 209 (224)
+. ++. ++|.... ++..+. .. ...++.+-+|..+|++
T Consensus 98 ~~-i~~~~~~~l~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Rl~~~L~~~~~~~~~~~~~~t~~~lA~~lg~s 176 (216)
T 4ev0_A 98 LA-LFREDYLALIRRLPLVAHNLAALLARRLREADLELDLLSFEEARNRVAYALLKLLRQGLGPLFQIRHHELAALAGTS 176 (216)
T ss_dssp EE-EEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCHHHHHHHHTSC
T ss_pred EE-EcHHHHHHHHHHCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCccCCCCCHHHHHHHhCCC
Confidence 43 321 2343210 111111 00 1247899999999999
Q ss_pred HHHHHHhhhhhc
Q 048097 210 PKIVKDLQDKFI 221 (224)
Q Consensus 210 ~~~v~~l~~~~~ 221 (224)
.+.+.++.+++.
T Consensus 177 r~tvsR~l~~l~ 188 (216)
T 4ev0_A 177 RETVSRVLHALA 188 (216)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999998887654
No 185
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=80.94 E-value=4.9 Score=31.92 Aligned_cols=52 Identities=21% Similarity=0.259 Sum_probs=37.6
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEE
Q 048097 98 VRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 98 ~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~ 152 (224)
....+++|..+-.- ......+.+|++|.+.+...++++ .+.....+.+||++
T Consensus 35 ~~~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~~~~~~G--~~~~~~~~~~G~~~ 86 (237)
T 3fx3_A 35 VWRSYDRGETLFLQ-EEKAQAIHVVIDGWVKLFRMTPTG--SEAVVSVFTRGESF 86 (237)
T ss_dssp EEEEECTTCEEECT-TSCCCEEEEEEESEEEEEEECTTS--CEEEEEEEETTEEE
T ss_pred EEEEECCCCEEEcC-CCccceEEEEEeeEEEEEEECCCC--CEEEEEEeCCCCEe
Confidence 45678888865322 222578999999999998877662 44555788999988
No 186
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=80.71 E-value=5.5 Score=30.82 Aligned_cols=53 Identities=17% Similarity=0.234 Sum_probs=37.4
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEE
Q 048097 98 VRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFV 153 (224)
Q Consensus 98 ~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v 153 (224)
....+++|..+-..=- ....+.+|++|.+.+...++++ .+.....+.+||++-
T Consensus 20 ~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~~~~g--~~~~~~~~~~g~~~G 72 (210)
T 3ryp_A 20 HIHKYPSKSTLIHQGE-KAETLYYIVKGSVAVLIKDEEG--KEMILSYLNQGDFIG 72 (210)
T ss_dssp EEEEECTTCEEECTTS-BCCEEEEEEESEEEEEEECTTC--CEEEEEEEETTCEES
T ss_pred EEEEeCCCCEEECCCC-CCCeEEEEEeCEEEEEEECCCC--CEEEEEEcCCCCEee
Confidence 3466788875432222 2578999999999998776652 444556789999984
No 187
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=80.48 E-value=5.3 Score=30.93 Aligned_cols=53 Identities=13% Similarity=0.055 Sum_probs=37.8
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEE
Q 048097 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~ 152 (224)
+....+.+|..+-.-=- .+..+.+|++|++.+...++++ .+.....+.+||++
T Consensus 62 ~~~~~~~~ge~i~~~G~-~~~~ly~I~~G~v~v~~~~~~g--~~~~~~~~~~G~~f 114 (187)
T 3gyd_A 62 MQCYAAPRDCQLLTEGD-PGDYLLLILTGEVNVIKDIPNK--GIQTIAKVGAGAII 114 (187)
T ss_dssp CEEEEECTTCEEECTTS-CCCEEEEEEEEEEEEEEEETTT--EEEEEEEEETTCEE
T ss_pred cEEEEeCCCCEEEcCCC-CCCeEEEEEeCEEEEEEECCCC--CeEEEEEccCCCee
Confidence 45567888876432222 3679999999999998877652 34455688999987
No 188
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=80.46 E-value=6.1 Score=34.03 Aligned_cols=75 Identities=12% Similarity=0.092 Sum_probs=48.9
Q ss_pred cceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEE
Q 048097 93 LGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVA 172 (224)
Q Consensus 93 lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~ 172 (224)
..+.+..+.+++|+.......+...-++||++|++.+. +. +. ...+.++.++++..|..=.+.+.+.+++.+
T Consensus 167 ~~~~~~~~~l~~g~~~~~~l~~~~~~~lyv~~G~v~v~--g~----~~--~~~~~~~~~~~l~~gd~~~i~~~a~~~a~~ 238 (290)
T 1j1l_A 167 TPTLYLDFKLDPGAKHSQPIPKGWTSFIYTISGDVYIG--PD----DA--QQKIEPHHTAVLGEGDSVQVENKDPKRSHF 238 (290)
T ss_dssp SCEEEEEEEECTTCEEEEECCTTCEEEEEEEESCEEES--CT----TS--CEEECTTEEEEECSCSEEEEECCSSSCEEE
T ss_pred CCcEEEEEEECCCCEEEeecCCCCEEEEEEEeCeEEEC--Cc----cc--ceeccCceEEEecCCCEEEEEEcCCCCcEE
Confidence 46889999999999764443333467899999999873 11 10 134666777777666655555544566666
Q ss_pred EEE
Q 048097 173 FAG 175 (224)
Q Consensus 173 l~~ 175 (224)
+..
T Consensus 239 LLl 241 (290)
T 1j1l_A 239 VLI 241 (290)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 189
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=80.44 E-value=5.1 Score=31.68 Aligned_cols=54 Identities=11% Similarity=0.089 Sum_probs=38.2
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEE
Q 048097 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFV 153 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v 153 (224)
+....+++|..+-.-=. ....+++|++|.+.+...++++ .+.....+.+||++-
T Consensus 29 ~~~~~~~~g~~i~~~G~-~~~~~y~i~~G~v~~~~~~~~g--~~~~~~~~~~g~~~G 82 (231)
T 3e97_A 29 VTERNFQPDELVVEQDA-EGEALHLVTTGVVRVSRVSLGG--RERVLGDIYAPGVVG 82 (231)
T ss_dssp EEEEEECTTCBCCCTTC-TTTCEEEECSSEEEEEEECC----CEEEEEEEESSEEES
T ss_pred cEEEEECCCCEEEeCCC-CCCeEEEEEecEEEEEEECCCC--ceEEEEecCCCCEEe
Confidence 45677888886543323 3678999999999998776652 445567889999873
No 190
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=79.55 E-value=5.3 Score=31.40 Aligned_cols=53 Identities=13% Similarity=0.155 Sum_probs=38.1
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEE
Q 048097 98 VRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFV 153 (224)
Q Consensus 98 ~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v 153 (224)
....+++|..+-..=. ....+.+|++|.+.+...++++ .+.....+.+||++-
T Consensus 35 ~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~~~~G--~~~~~~~~~~g~~~G 87 (230)
T 3iwz_A 35 HRRRYPTRTDVFRPGD-PAGTLYYVISGSVSIIAEEDDD--RELVLGYFGSGEFVG 87 (230)
T ss_dssp EEEEECTTCEEECTTS-BCCEEEEEEESCEEEEEECTTS--CEEEEEEECTTCEES
T ss_pred eEEEeCCCCEEECCCC-CCCeEEEEEeeEEEEEEECCCC--CEEEEEEecCCCEEE
Confidence 4567888876532212 2578999999999998877663 455567889999984
No 191
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=79.40 E-value=5.9 Score=31.19 Aligned_cols=53 Identities=9% Similarity=0.237 Sum_probs=37.5
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEE
Q 048097 98 VRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFV 153 (224)
Q Consensus 98 ~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v 153 (224)
....+++|..+-.- ...+..+.+|++|.+.+...++++ .+.....+.+||++-
T Consensus 30 ~~~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~~~~~~g--~~~~~~~~~~G~~~G 82 (227)
T 3d0s_A 30 QPVDFPRGHTVFAE-GEPGDRLYIIISGKVKIGRRAPDG--RENLLTIMGPSDMFG 82 (227)
T ss_dssp CEEEECTTCEEECT-TCCCCEEEEEEESCEEEEEECTTS--CEEEEEEECTTCEES
T ss_pred eEEEeCCCCEEEcC-CCcCCEEEEEEeeEEEEEEECCCC--cEEEEEEecCCCEEe
Confidence 35678888765322 223578999999999998776652 455557889999883
No 192
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=78.20 E-value=4.7 Score=32.16 Aligned_cols=119 Identities=8% Similarity=-0.001 Sum_probs=71.6
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEc----CC--CeeEEEeCCCCcE
Q 048097 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFP----IG--LIHFQVNIGKTSA 170 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P----~G--~~H~~~N~G~~~a 170 (224)
+....+++|..+-.--. .+..+.+|++|.+.+...++++ .+.....+.+||++-.- .. ..+..... ++.
T Consensus 43 ~~~~~~~~ge~i~~~G~-~~~~~y~i~~G~v~~~~~~~~G--~~~~l~~~~~G~~fG~~~~~~~~~~~~~~~~A~--~~~ 117 (232)
T 1zyb_A 43 LHFIKHKAGETIIKSGN-PCTQLCFLLKGEISIVTNAKEN--IYTVIEQIEAPYLIEPQSLFGMNTNYASSYVAH--TEV 117 (232)
T ss_dssp CEEEEECTTCEEECTTS-BCCEEEEEEESEEEEEEECGGG--SCEEEEEEESSEEECGGGGSSSCCBCSSEEEES--SCE
T ss_pred cEEEEECCCCEEECCCC-cccEEEEEEeeEEEEEEECCCC--CEEEEEEccCCCeeeehHHhCCCCCCceEEEEc--cce
Confidence 45677888886533222 3578999999999998776652 45555788999988322 21 23344433 344
Q ss_pred EEEEEEe--------CCCCceee----------------------------chhhhhc--CC------CCCCHHHHHhhc
Q 048097 171 VAFAGFS--------SQFPGVIT----------------------------IADTVFG--AN------PPINPDFLGKAF 206 (224)
Q Consensus 171 ~~l~~~~--------s~~pg~~~----------------------------~~~~lf~--~~------p~~p~~vLa~af 206 (224)
.++. ++ .++|.... ++..+.. .. -.++.+-||...
T Consensus 118 ~v~~-i~~~~~~~l~~~~p~~~~~l~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~t~~~lA~~l 196 (232)
T 1zyb_A 118 HTVC-ISKAFVLSDLFRYDIFRLNYMNIVSNRAQNLYSRLWDEPTLDLKSKIIRFFLSHCEKPQGEKTFKVKMDDLARCL 196 (232)
T ss_dssp EEEE-EEHHHHHHTGGGSHHHHHHHHHHHHHHHHHHHHHTTSCCCCSHHHHHHHHHHTTCSSSSSCEEEECCHHHHHHHH
T ss_pred EEEE-EEHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHhhcCCeEEecCCHHHHHHHh
Confidence 4443 22 23443210 1111111 01 137899999999
Q ss_pred CCCHHHHHHhhhhhc
Q 048097 207 QLDPKIVKDLQDKFI 221 (224)
Q Consensus 207 ~~~~~~v~~l~~~~~ 221 (224)
|++.+.+.++.+++.
T Consensus 197 G~sr~tvsR~l~~l~ 211 (232)
T 1zyb_A 197 DDTRLNISKTLNELQ 211 (232)
T ss_dssp TSCHHHHHHHHHHHH
T ss_pred CCChhHHHHHHHHHH
Confidence 999999988877654
No 193
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=77.87 E-value=7.8 Score=30.37 Aligned_cols=116 Identities=15% Similarity=0.213 Sum_probs=70.9
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEEEEE
Q 048097 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAFAGF 176 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l~~~ 176 (224)
+....+++|..+-.--. .+..+++|++|.+.+ ..++++ .+.....+.+||++-.| ..+.... .++..++. +
T Consensus 27 ~~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~-~~~~~G--~~~~~~~~~~G~~~G~~--~~~~~~A--~~~~~v~~-i 97 (220)
T 2fmy_A 27 FREQRYSKKAILYTPNT-ERNLVFLVKSGRVRV-YLAYED--KEFTLAILEAGDIFCTH--TRAFIQA--MEDTTILY-T 97 (220)
T ss_dssp SEEEEECTTCEEECTTC-SSCEEEEEEESEEEE-EEECSS--CEEEEEEEETTCEEESC--SSSEEEE--SSSEEEEE-E
T ss_pred hheeEeCCCCEEECCCC-CCCeEEEEEecEEEE-EECCCC--CEEEEEEcCCCCEeCCc--cceEEEE--cCcEEEEE-E
Confidence 34567888886532212 357899999999999 455552 44555788999998762 2333433 34455543 3
Q ss_pred e--------CCCCceee----------------------------chhhh------hc--------CCCCCCHHHHHhhc
Q 048097 177 S--------SQFPGVIT----------------------------IADTV------FG--------ANPPINPDFLGKAF 206 (224)
Q Consensus 177 ~--------s~~pg~~~----------------------------~~~~l------f~--------~~p~~p~~vLa~af 206 (224)
+ .++|.... ++..+ ++ -..+++.+-||...
T Consensus 98 ~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~g~~~~~~~~~~~~~t~~~lA~~l 177 (220)
T 2fmy_A 98 DIRNFQNIVVEFPAFSLNMVKVLGDLLKNSLTIINGLVFKDARLRLAEFLVQAAMDTGLKVPQGIKLELGLNTEEIALML 177 (220)
T ss_dssp EHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCEEETTEEEEECSSCHHHHHHHH
T ss_pred eHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhCCCCCCcEEEeccCCHHHHHHHh
Confidence 2 23454310 00000 01 01258999999999
Q ss_pred CCCHHHHHHhhhhhc
Q 048097 207 QLDPKIVKDLQDKFI 221 (224)
Q Consensus 207 ~~~~~~v~~l~~~~~ 221 (224)
|++.+++.++.+++.
T Consensus 178 g~sr~tvsR~l~~l~ 192 (220)
T 2fmy_A 178 GTTRQTVSVLLNDFK 192 (220)
T ss_dssp TSCHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHH
Confidence 999999998887654
No 194
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=77.80 E-value=5.2 Score=30.90 Aligned_cols=51 Identities=16% Similarity=0.083 Sum_probs=34.1
Q ss_pred EEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEE
Q 048097 101 DYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVF 154 (224)
Q Consensus 101 ~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~ 154 (224)
.+++|..+-.- ...+..+++|++|.+.+...++++ .+.....+.+||++=.
T Consensus 3 ~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~~~~~g--~~~~~~~~~~G~~~Ge 53 (195)
T 3b02_A 3 RFARKETIYLR-GEEARTLYRLEEGLVRVVELLPDG--RLITLRHVLPGDYFGE 53 (195)
T ss_dssp EECTTCEEECT-TSBCCCEEEEEESCEEEEEECTTS--CEEEEEEECTTCEECG
T ss_pred EcCCCCEEECC-CCCCCeEEEEEeCEEEEEEECCCC--CEEEEEEecCCCEech
Confidence 45566643221 112567999999999998776652 4455578899998843
No 195
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=77.44 E-value=2.1 Score=31.37 Aligned_cols=53 Identities=13% Similarity=0.120 Sum_probs=34.5
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEE
Q 048097 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~ 152 (224)
+....+++|..+-..-. .+..+.+|++|.+.+...++++ .+.....+.+||++
T Consensus 35 ~~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~~~~g--~~~~~~~~~~G~~~ 87 (154)
T 2z69_A 35 SDLVNLDKGAYVFRQGE-PAHAFYYLISGCVKIYRLTPEG--QEKILEVTNERNTF 87 (154)
T ss_dssp CEEEEECTTCEEECTTS-BCCEEEEEEESCEEEECCCC-------CCEEECTTEEE
T ss_pred CcEEEecCCCEEecCCC-ccceEEEEEeCEEEEEEECCCC--CEEEEEEccCCCee
Confidence 45567888886533222 3578999999999997655442 33334678999987
No 196
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=77.02 E-value=4.1 Score=35.46 Aligned_cols=47 Identities=19% Similarity=0.365 Sum_probs=31.7
Q ss_pred CcEEEEEEec----EEEEEEEeCCCC-------CCe----eEEEEecCCCEEEEcCCCeeEE
Q 048097 116 ATEILVVLEG----TLYVGFVTSNQL-------NNT----LIAKVLNKGDVFVFPIGLIHFQ 162 (224)
Q Consensus 116 a~Ei~~Vl~G----~~~v~~v~~~~~-------~~k----~~~~~l~~GDv~v~P~G~~H~~ 162 (224)
=+|+.|+++. ++.++....+.+ .+. +....|++||.+++|+|.+|.+
T Consensus 117 KpE~~y~L~~~~~~~~~~G~~~~~~e~l~~~i~~~~~~~lLn~v~l~pGd~~~ipaGt~HA~ 178 (319)
T 1qwr_A 117 KTECWYIIDCKENAEIIYGHTARSKTELVTMINSGDWEGLLRRIKIKPGDFYYVPSGTLHAL 178 (319)
T ss_dssp CCEEEEEEEECTTCEEEEEECCSSHHHHHHHHHTTCHHHHEEEEECCTTCEEEECTTCCEEE
T ss_pred CCEEEEEccCCCchhheeCCCCCCHHHHHHHHHcCCHHHhceEEEcCCCCEEEcCCCCceEe
Confidence 3799999985 455552111100 000 2357899999999999999997
No 197
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=77.00 E-value=8.4 Score=28.59 Aligned_cols=52 Identities=8% Similarity=-0.036 Sum_probs=35.8
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEE
Q 048097 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~ 152 (224)
+....+.+|..+-.. ...+..+.+|++|++.+.. ..++ .......+.+||++
T Consensus 61 ~~~~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~~-~~~g--~~~~~~~~~~G~~f 112 (161)
T 3idb_B 61 MFEKLVKEGEHVIDQ-GDDGDNFYVIDRGTFDIYV-KCDG--VGRCVGNYDNRGSF 112 (161)
T ss_dssp CEEEEECTTCEEECT-TSCCCEEEEEEESEEEEEE-EETT--EEEEEEEEESCCEE
T ss_pred cceeEeCCCCEEEeC-CCCCcEEEEEEeCEEEEEE-cCCC--CeEEEEEcCCCCEe
Confidence 445778888764222 2336799999999999987 4441 34445678999976
No 198
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=76.81 E-value=1.8 Score=37.44 Aligned_cols=47 Identities=23% Similarity=0.305 Sum_probs=34.7
Q ss_pred cEEEEEEe-cEEEEEEEeCCC--------CCCe------eEEEEecCCCEEEEcCCCeeEEE
Q 048097 117 TEILVVLE-GTLYVGFVTSNQ--------LNNT------LIAKVLNKGDVFVFPIGLIHFQV 163 (224)
Q Consensus 117 ~Ei~~Vl~-G~~~v~~v~~~~--------~~~k------~~~~~l~~GDv~v~P~G~~H~~~ 163 (224)
+|+.|+++ .++..||..... ..++ +....+++||.+++|+|.+|.+-
T Consensus 118 pE~~y~L~~~~~~~Gf~~~~~~~~~~~~l~~~~~~~~~lLn~v~l~pGd~~~ipaGt~HA~~ 179 (300)
T 1zx5_A 118 ESAWLVFNKGKAYAGFKEDVKIEELEEKLKEEDFDFKTLLNTFETTPYDTFVIRPGIPHAGE 179 (300)
T ss_dssp CEEEEECSSCEEEEEESSCCCHHHHHHHHTSSSCCGGGGEEEEECCTTCEEEECTTCCEEEE
T ss_pred cEEEEEcccHHHhhCCCCCCCHHHHHHHHHhCchhHHHHhceeECCCCCEEEcCCCCceEcC
Confidence 69999998 567777653210 0122 45678999999999999999974
No 199
>1xe7_A YML079WP, hypothetical 22.5 kDa protein in TUB1-CPR3 intergenic region; jelly roll motif, cupin superfamily, structural genomics; HET: GUN; 1.75A {Saccharomyces cerevisiae} SCOP: b.82.1.16 PDB: 1xe8_A*
Probab=76.78 E-value=29 Score=28.34 Aligned_cols=109 Identities=13% Similarity=0.130 Sum_probs=63.1
Q ss_pred EEEEEEEcCCC-cCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEec----CCC--EEEEcCCCeeEEEeC-CC
Q 048097 96 SAVRIDYAPYG-QNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLN----KGD--VFVFPIGLIHFQVNI-GK 167 (224)
Q Consensus 96 s~~~v~l~pgg-~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~----~GD--v~v~P~G~~H~~~N~-G~ 167 (224)
+....-|.+++ .-..|.- ++.|+.+...|.....++.++ ++..+.+|. +|+ -++||+|.....+.. +.
T Consensus 80 TaIYfLL~~~~~~S~wHRv-~sdEiW~~h~G~p~~~li~~d---g~~~~~~LG~dl~~Ge~pQ~vVPaG~WqaA~~~~~~ 155 (203)
T 1xe7_A 80 TLIYYLLTPDSPIGKFHKN-INRIIHILQRGKGQYVLVYPD---GQVKSFKVGFDYKNGEVSQWVVPGGVFKASFLLPNE 155 (203)
T ss_dssp EEEEEEEBTTBCEEEEEEE-SSCEEEEEEEECEEEEEECTT---SCEEEEEESSCGGGTCBSEEEECTTCEEEEEECCCT
T ss_pred eEEEEEEcCCCCcccceee-CCCEEEEEEcCCccEEEEcCC---CCEEEEEeCCCcccCcccEEEEcCCEEEEeEecCCC
Confidence 44444567665 4555544 589999999996555566665 454455554 455 479999999988654 33
Q ss_pred CcE--EEEEEEeCCCCceeechhhhhcCCCCCCHH-HHHhhcCCCHHHHHHhhh
Q 048097 168 TSA--VAFAGFSSQFPGVITIADTVFGANPPINPD-FLGKAFQLDPKIVKDLQD 218 (224)
Q Consensus 168 ~~a--~~l~~~~s~~pg~~~~~~~lf~~~p~~p~~-vLa~af~~~~~~v~~l~~ 218 (224)
+-. .+++..- -||+..-. |.. .+.+ -|.+-|. ++.++.|+-
T Consensus 156 ~~~~~tLVgCtV--aPGFdF~d---Fel---~~~~~~L~~~~P--~~~~~~l~~ 199 (203)
T 1xe7_A 156 EFDNGFLISEVV--VPGFDFED---HTF---LKGEDELKHLVG--PEKAAELAF 199 (203)
T ss_dssp TTTTCEEEEEEE--SSCCCGGG---EEE---CCHHHHHHHHHC--HHHHHHTGG
T ss_pred CcccceEEEEEe--cCCccchh---cEe---cCCcHHHHHHCC--HHHHHHHHH
Confidence 221 3444332 34443211 332 4445 4555554 677777654
No 200
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=76.73 E-value=6.6 Score=31.57 Aligned_cols=62 Identities=15% Similarity=0.126 Sum_probs=42.9
Q ss_pred cccccceEEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEE
Q 048097 89 GLNTLGTSAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFV 153 (224)
Q Consensus 89 ~L~~lgis~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v 153 (224)
.|...+..+....+++|..+-.--- ....+.+|++|.+.+...++++ .+.....+.+||++-
T Consensus 35 ~L~~~~~~~~~~~~~~ge~i~~~G~-~~~~ly~v~~G~v~~~~~~~~G--~~~~l~~~~~g~~~G 96 (243)
T 3la7_A 35 QMATGAFPPVVETFERNKTIFFPGD-PAERVYFLLKGAVKLSRVYEAG--EEITVALLRENSVFG 96 (243)
T ss_dssp HHCCSSCCCEEEEECTTCEEECTTS-BCCEEEEEEESCEEEEEECTTC--CEEEEEEECTTCEES
T ss_pred HHhhccchheeEEECCCCEEEcCCC-CCceEEEEEeCEEEEEEECCCC--CEEEEEEecCCCEEc
Confidence 3433344455778888886533222 2578999999999998877663 455567889999873
No 201
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=76.62 E-value=7.7 Score=31.62 Aligned_cols=53 Identities=17% Similarity=0.234 Sum_probs=38.3
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEE
Q 048097 98 VRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFV 153 (224)
Q Consensus 98 ~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v 153 (224)
....+++|..+-.-=- ....+++|++|.+.+...++++ .+.....+.+||++-
T Consensus 70 ~~~~~~~ge~i~~~G~-~~~~~y~I~~G~v~~~~~~~~G--~e~~~~~~~~G~~~G 122 (260)
T 3kcc_A 70 HIHKYPSKSTLIHQGE-KAETLYYIVKGSVAVLIKDEEG--KEMILSYLNQGDFIG 122 (260)
T ss_dssp EEEEECTTCEEECTTC-BCCEEEEEEECEEEEEEECTTC--CEEEEEEEETTCEES
T ss_pred EEEEECCCCEEECCCC-cCCeEEEEEeCEEEEEEECCCC--CEEEEEEcCCCCEEe
Confidence 4667888886522212 2578999999999998876652 455567889999984
No 202
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=75.64 E-value=4.5 Score=32.01 Aligned_cols=119 Identities=10% Similarity=0.091 Sum_probs=68.3
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEc-----CCCeeEEEeCCCCcEE
Q 048097 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFP-----IGLIHFQVNIGKTSAV 171 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P-----~G~~H~~~N~G~~~a~ 171 (224)
+....+++|..+-.- ......+.+|++|.+.+...++++ .+.....+.+||++-.. ....+.... .++..
T Consensus 33 ~~~~~~~~g~~i~~~-g~~~~~~y~v~~G~v~~~~~~~~g--~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A--~~~~~ 107 (232)
T 2gau_A 33 IQPFPCKKASTVFSE-GDIPNNLFYLYEGKIKILREGVYG--RFHISRIVKPGQFFGMRPYFAEETCSSTAIA--VENSK 107 (232)
T ss_dssp CEEEEECTTCEEECT-TCCCCEEEEEEESCEEEEC-------CCCEEEEECTTCEESHHHHHHTSCCSSEEEE--SSCEE
T ss_pred CeEEEECCCCEEEeC-CCCCCeEEEEEeCEEEEEEECCCC--CEEEEEEeCCCCEeeeehhhCCCCcceEEEE--ecceE
Confidence 455778888865322 222578999999999997665542 44456789999988321 112333333 33444
Q ss_pred EEEEEe--------CCCCceee----------------------------chhhh------hc-------CCCCCCHHHH
Q 048097 172 AFAGFS--------SQFPGVIT----------------------------IADTV------FG-------ANPPINPDFL 202 (224)
Q Consensus 172 ~l~~~~--------s~~pg~~~----------------------------~~~~l------f~-------~~p~~p~~vL 202 (224)
++. ++ .++|.... ++..+ ++ -...++.+-|
T Consensus 108 v~~-i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~t~~~l 186 (232)
T 2gau_A 108 VLA-IPVEAIEALLKGNTSFCRYFLKALAKELGYAERRTVTLTQKHVRGRLAETLLILKENFGFENDGATLSIYLSREEL 186 (232)
T ss_dssp EEE-EEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHCBCTTSSBBSCCCCHHHH
T ss_pred EEE-EEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCCCCcEEEcccCHHHH
Confidence 442 32 12343210 11111 11 0125899999
Q ss_pred HhhcCCCHHHHHHhhhhhc
Q 048097 203 GKAFQLDPKIVKDLQDKFI 221 (224)
Q Consensus 203 a~af~~~~~~v~~l~~~~~ 221 (224)
|...|++.+++.++.+++.
T Consensus 187 A~~lg~sr~tvsR~l~~l~ 205 (232)
T 2gau_A 187 ATLSNMTVSNAIRTLSTFV 205 (232)
T ss_dssp HHHTTSCHHHHHHHHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHH
Confidence 9999999999998887654
No 203
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=75.55 E-value=5.2 Score=31.44 Aligned_cols=53 Identities=21% Similarity=0.243 Sum_probs=37.6
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEE
Q 048097 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~ 152 (224)
+....+++|..+-..-. .+..+++|++|.+.+...++++ .+.....+.+||++
T Consensus 22 ~~~~~~~~g~~i~~~G~-~~~~~y~v~~G~v~~~~~~~~G--~~~~~~~~~~G~~~ 74 (213)
T 1o5l_A 22 GKVIVFRKGEIVKHQDD-PIEDVLILLEGTLKTEHVSENG--KTLEIDEIKPVQII 74 (213)
T ss_dssp SEEEEECTTCEEECTTC-BCCEEEEEEESCEEEEEECTTS--CEEEEEEECSSEES
T ss_pred cEEEEECCCCEEEcCCC-ccceEEEEEeeEEEEEEECCCC--CEEEEEEecCCCEe
Confidence 34567888886533222 2578999999999998776652 44555788999988
No 204
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=74.72 E-value=7.8 Score=30.18 Aligned_cols=118 Identities=10% Similarity=0.079 Sum_probs=70.4
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEc-----CC--CeeEEEeCCCCcE
Q 048097 98 VRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFP-----IG--LIHFQVNIGKTSA 170 (224)
Q Consensus 98 ~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P-----~G--~~H~~~N~G~~~a 170 (224)
....+++|..+-..=. ....+.+|++|.+.+...++++ .+.....+.+||++.+. .+ ..+.... .++.
T Consensus 27 ~~~~~~~g~~i~~~G~-~~~~~y~i~~G~v~~~~~~~~G--~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~a--~~~~ 101 (220)
T 3dv8_A 27 ITQHVKKGTIIHNGNM-DCTGLLLVKSGQLRTYILSDEG--REITLYRLFDMDMCLLSASCIMRSIQFEVTIEA--EKDT 101 (220)
T ss_dssp EEEEECTTCEEEEGGG-CCCEEEEEEESCEEEEEECTTS--CEEEEEEECTTCEESGGGGGGCTTCCCCCEEEE--SSCE
T ss_pred ceEEeCCCCEEECCCC-CcceEEEEEeceEEEEEECCCC--CEEEEEecCCCCeeehhHHHHhCCCCCceEEEE--eeee
Confidence 4567888886533222 3578999999999998877663 44555788999996321 12 2223333 3344
Q ss_pred EEEEEEe--------CCCCceee----------------------------chhh------hhc-CCCCCCHHHHHhhcC
Q 048097 171 VAFAGFS--------SQFPGVIT----------------------------IADT------VFG-ANPPINPDFLGKAFQ 207 (224)
Q Consensus 171 ~~l~~~~--------s~~pg~~~----------------------------~~~~------lf~-~~p~~p~~vLa~af~ 207 (224)
.++. ++ .++|.... ++.. ..+ ..-+++.+-||..+|
T Consensus 102 ~~~~-i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~~~~~~~~~~~~~t~~~lA~~lg 180 (220)
T 3dv8_A 102 DLWI-IPAEIYKGIMKDSAPVANYTNELMATRFSDVMWLIEQIMWKSLDKRVASFLLEETSIEGTNELKITHETIANHLG 180 (220)
T ss_dssp EEEE-EEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTSSEECCCHHHHHHHHT
T ss_pred EEEE-EEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcCCceecCCHHHHHHHhC
Confidence 4443 32 12343210 0000 011 001488999999999
Q ss_pred CCHHHHHHhhhhhc
Q 048097 208 LDPKIVKDLQDKFI 221 (224)
Q Consensus 208 ~~~~~v~~l~~~~~ 221 (224)
++.+++.++.+++.
T Consensus 181 ~sr~tvsR~l~~L~ 194 (220)
T 3dv8_A 181 SHREVITRMLRYFQ 194 (220)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 99999998887654
No 205
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=74.25 E-value=7.7 Score=31.19 Aligned_cols=119 Identities=13% Similarity=0.136 Sum_probs=71.2
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEE--cCCCeeEEEeCCCCcEEEEE
Q 048097 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVF--PIGLIHFQVNIGKTSAVAFA 174 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~--P~G~~H~~~N~G~~~a~~l~ 174 (224)
+....+++|..+-.--- .+..+.+|++|.+.+...++++ .+.....+.+||++-. .....+.... .++..++.
T Consensus 32 ~~~~~~~~g~~i~~~G~-~~~~~y~i~~G~v~~~~~~~~G--~~~~~~~~~~G~~~G~~l~~~~~~~~~A--~~~~~v~~ 106 (250)
T 3e6c_C 32 GLIRDFAKGSAVIMPGE-EITSMIFLVEGKIKLDIIFEDG--SEKLLYYAGGNSLIGKLYPTGNNIYATA--MEPTRTCW 106 (250)
T ss_dssp SEEEEECTTCEEECTTC-CCCSEEEEEESCEEEEEECTTS--CEEEEEEECTTCEECCCSCCSCCEEEEE--SSSEEEEE
T ss_pred CeEEEECCCCEEECCCC-CCCeEEEEEeeEEEEEEECCCC--CEEEEEEecCCCEEeeecCCCCceEEEE--cccEEEEE
Confidence 35567788876533222 3578999999999998876663 4555578899999843 1122222322 33444443
Q ss_pred EEe--------CCCCceee----------------------------chhhh------hcC--------CCCCCHHHHHh
Q 048097 175 GFS--------SQFPGVIT----------------------------IADTV------FGA--------NPPINPDFLGK 204 (224)
Q Consensus 175 ~~~--------s~~pg~~~----------------------------~~~~l------f~~--------~p~~p~~vLa~ 204 (224)
++ .++|.... ++..+ ++. ..+++.+-||.
T Consensus 107 -i~~~~~~~l~~~~p~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~i~~~~t~~~iA~ 185 (250)
T 3e6c_C 107 -FSEKSLRTVFRTDEDMIFEIFKNYLTKVAYYARQVAEMNTYNPTIRILRLFYELCSSQGKRVGDTYEITMPLSQKSIGE 185 (250)
T ss_dssp -ECHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHCEEETTEEEEECCCCHHHHHH
T ss_pred -EcHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCCcEecCCCCHHHHHH
Confidence 32 12443210 01111 110 12589999999
Q ss_pred hcCCCHHHHHHhhhhhc
Q 048097 205 AFQLDPKIVKDLQDKFI 221 (224)
Q Consensus 205 af~~~~~~v~~l~~~~~ 221 (224)
.+|++.+++.++.+++.
T Consensus 186 ~lG~sr~tvsR~l~~L~ 202 (250)
T 3e6c_C 186 ITGVHHVTVSRVLASLK 202 (250)
T ss_dssp HHTCCHHHHHHHHHHHH
T ss_pred HhCCcHHHHHHHHHHHH
Confidence 99999999998887654
No 206
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=73.97 E-value=6.8 Score=30.34 Aligned_cols=117 Identities=15% Similarity=0.100 Sum_probs=67.3
Q ss_pred EEEEcCCCcCCCccCCCC--cEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEE----cCCCeeEEEeCCCCcEEE
Q 048097 99 RIDYAPYGQNPPHTHPRA--TEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVF----PIGLIHFQVNIGKTSAVA 172 (224)
Q Consensus 99 ~v~l~pgg~~ppH~Hp~a--~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~----P~G~~H~~~N~G~~~a~~ 172 (224)
...+++|..+-..-. .. ..+++|++|.+.+...++++ .+.....+.+||++-. .....+.... .++..+
T Consensus 7 ~~~~~~g~~i~~~g~-~~~~~~~y~v~~G~v~~~~~~~~G--~~~~~~~~~~g~~~G~~~l~~~~~~~~~~A--~~~~~v 81 (202)
T 2zcw_A 7 TVSFKAGDVILYPGV-PGPRDRAYRVLEGLVRLEAVDEEG--NALTLRLVRPGGFFGEEALFGQERIYFAEA--ATDVRL 81 (202)
T ss_dssp CEEECTTCEEECSBS-CCTTCCCEEEEESCEEEEEECTTS--CEEEEEEECTTCEECTHHHHTCCBCSEEEE--SSCEEE
T ss_pred EEEECCCCEEECCCC-CCCCCeEEEEEeCEEEEEEECCCC--cEEEEEEecCCCEeeehhcCCCCcceEEEE--cccEEE
Confidence 356777775422212 24 56899999999998776652 4555578899998843 1122333333 344555
Q ss_pred EEEEeCC-CCceee----------------------------chhhhhc-------------CCCCCCHHHHHhhcCCCH
Q 048097 173 FAGFSSQ-FPGVIT----------------------------IADTVFG-------------ANPPINPDFLGKAFQLDP 210 (224)
Q Consensus 173 l~~~~s~-~pg~~~----------------------------~~~~lf~-------------~~p~~p~~vLa~af~~~~ 210 (224)
+.. ... .|.... ++..+.. -..+++.+-||...|++.
T Consensus 82 ~~i-~~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~t~~~lA~~lg~sr 160 (202)
T 2zcw_A 82 EPL-PENPDPELLKDLAQHLSQGLAEAYRRIERLATQRLKNRMAAALLELSETPLAHEEEGKVVLKATHDELAAAVGSVR 160 (202)
T ss_dssp EEC-CSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHTTSTTEEEETTEEEEECCHHHHHHHHTCCH
T ss_pred EEE-hHhcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCcEEccCCCHHHHHHHhCCCH
Confidence 443 211 122100 0111110 001378899999999999
Q ss_pred HHHHHhhhhhc
Q 048097 211 KIVKDLQDKFI 221 (224)
Q Consensus 211 ~~v~~l~~~~~ 221 (224)
+.+.++.+++.
T Consensus 161 ~tvsR~l~~L~ 171 (202)
T 2zcw_A 161 ETVTKVIGELA 171 (202)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99988877654
No 207
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=73.42 E-value=18 Score=28.24 Aligned_cols=116 Identities=13% Similarity=0.081 Sum_probs=70.2
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEEEEE
Q 048097 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAFAGF 176 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l~~~ 176 (224)
+....+++|..+-.-=. .+..+++|++|.+.+. .++++ .+.....+.+||++- ....+.... .++..++. +
T Consensus 23 ~~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~-~~~~G--~~~~~~~~~~G~~fG--~~~~~~~~A--~~~~~v~~-i 93 (222)
T 1ft9_A 23 FRSKIHAKGSLVCTGEG-DENGVFVVVDGRLRVY-LVGEE--REISLFYLTSGDMFC--MHSGCLVEA--TERTEVRF-A 93 (222)
T ss_dssp CEEEEECTTCEEECTTC-CCCCEEEEEESEEEEE-EEETT--EEEEEEEEETTCEEE--SCSSCEEEE--SSCEEEEE-E
T ss_pred CcEEEECCCCEEECCCC-CCCeEEEEEecEEEEE-ECCCC--CEEEEEEcCCCCEec--CCCCEEEEE--ccceEEEE-E
Confidence 34567888886532222 2578999999999995 55542 444457889999987 333444444 34444543 3
Q ss_pred e--------CCCCceee----------------------------chhhhh------cC--------CCCCCHHHHHhhc
Q 048097 177 S--------SQFPGVIT----------------------------IADTVF------GA--------NPPINPDFLGKAF 206 (224)
Q Consensus 177 ~--------s~~pg~~~----------------------------~~~~lf------~~--------~p~~p~~vLa~af 206 (224)
+ .++|.... ++..+. +. ..+++.+-||..+
T Consensus 94 ~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~~t~~~lA~~l 173 (222)
T 1ft9_A 94 DIRTFEQKLQTCPSMAWGLIAILGRALTSCMRTIEDLMFHDIKQRIAGFFIDHANTTGRQTQGGVIVSVDFTVEEIANLI 173 (222)
T ss_dssp CHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHTCBCCCSCC--CCCCEECCCHHHHHHHH
T ss_pred eHHHHHHHHHHChHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCcEEEeccCCHHHHHHHh
Confidence 2 13454311 011110 10 0138899999999
Q ss_pred CCCHHHHHHhhhhhc
Q 048097 207 QLDPKIVKDLQDKFI 221 (224)
Q Consensus 207 ~~~~~~v~~l~~~~~ 221 (224)
|++.+++.++.+++.
T Consensus 174 G~sr~tvsR~l~~L~ 188 (222)
T 1ft9_A 174 GSSRQTTSTALNSLI 188 (222)
T ss_dssp CSCHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHH
Confidence 999999988877654
No 208
>3loi_A Putative uncharacterized protein; beta barrel, unknown function; 2.10A {Branchiostoma belcheri tsingtauense} SCOP: b.82.1.0 PDB: 3lzz_A*
Probab=71.07 E-value=37 Score=26.96 Aligned_cols=108 Identities=13% Similarity=0.121 Sum_probs=70.0
Q ss_pred eEEEEEEEcCCCcCCCccCC-CCcEEEEEEecE-EEEEEEeCCCCCCeeEEEEe----cCCC---EEEEcCCCeeEEEeC
Q 048097 95 TSAVRIDYAPYGQNPPHTHP-RATEILVVLEGT-LYVGFVTSNQLNNTLIAKVL----NKGD---VFVFPIGLIHFQVNI 165 (224)
Q Consensus 95 is~~~v~l~pgg~~ppH~Hp-~a~Ei~~Vl~G~-~~v~~v~~~~~~~k~~~~~l----~~GD---v~v~P~G~~H~~~N~ 165 (224)
.+....-|.+|. .-|||. ++.|+.+...|. +++.+..++ ++..+..| .+|+ -+++|+|.....+.
T Consensus 53 ~TaIYfLL~~~~--~S~~HRv~sdEiW~~~~G~pL~l~~~~~d---G~~~~~~LG~d~~~Ge~~pQ~vVP~G~WqaA~~- 126 (172)
T 3loi_A 53 LTMIYYLMQAGQ--PDPFHRVKSDETFVHNLGGSMKIHMIHPD---GSYSCSILGNPLEHPEARHQVVVPRRVWFAQEV- 126 (172)
T ss_dssp CEEEEEEEETTC--CEEEEECSSEEEEEEEEESCEEEEEECTT---SCEEEEEESCTTTSTTCBSEEEECTTCEEEEEE-
T ss_pred ceEEEEEEcCCC--CccCEEecCCEEEEEEcCCCEEEEEEcCC---CceEEEEeCCCcccCCcceEEEECCCEEEEEEe-
Confidence 344555667777 456662 588999999995 688888876 55555555 5688 78999999988876
Q ss_pred CCCcEEEEEEEeCCCCceeechhhhhcCCCCCCHHHHHhhcCCCHHHHHHhhh
Q 048097 166 GKTSAVAFAGFSSQFPGVITIADTVFGANPPINPDFLGKAFQLDPKIVKDLQD 218 (224)
Q Consensus 166 G~~~a~~l~~~~s~~pg~~~~~~~lf~~~p~~p~~vLa~af~~~~~~v~~l~~ 218 (224)
| .-.+++.. --||+..-. |.. .+.+-|.+.|.--++.|++|..
T Consensus 127 ~--~~~LVsct--VaPGF~f~d---fel---~~~~~L~~~~P~~~~~I~~lt~ 169 (172)
T 3loi_A 127 D--GYCLASVL--VAPGFDFKD---FSL---GKREELIKEYPQHRDVIMRCTS 169 (172)
T ss_dssp S--SEEEEEEE--EESCCCGGG---CEE---CCHHHHHHHCGGGHHHHHHTSC
T ss_pred C--CcEEEEEE--EcCCccchh---cEE---cCHHHHHHHCchHHHHHHHhcc
Confidence 3 23333332 234443211 332 4566777778777788888753
No 209
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=69.86 E-value=13 Score=29.67 Aligned_cols=117 Identities=11% Similarity=0.065 Sum_probs=68.9
Q ss_pred EEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcC---CC----eeEEEeCCCCcEE
Q 048097 99 RIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPI---GL----IHFQVNIGKTSAV 171 (224)
Q Consensus 99 ~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~---G~----~H~~~N~G~~~a~ 171 (224)
...+++|..+-. -...+..+.+|++|.+.+...++++ .+.....+ +||++-... +. .+...-.. ++..
T Consensus 20 ~~~~~~ge~i~~-~G~~~~~~y~I~~G~v~~~~~~~~G--~e~~~~~~-~G~~~Ge~~~~~~~~~~~~~~~~a~~-~~~~ 94 (238)
T 2bgc_A 20 PKQFHKKELIFN-QWDPQEYCIFLYDGITKLTSISENG--TIMNLQYY-KGAFVIMSGFIDTETSVGYYNLEVIS-EQAT 94 (238)
T ss_dssp CEEEETTCEEEC-TTCCCCEEEEEEESEEEEEEECTTS--CEEEEEEE-ESSEEEESBCTTTCCBSCCCEEEECS-SEEE
T ss_pred EEEECCCCEEEe-CCCCCceEEEEEecEEEEEEECCCC--CEEEEEEc-CCCEecchhhhcCCCcCcceeEEEEE-cceE
Confidence 456777776522 1223578999999999998777662 44444556 899985542 22 34444433 4555
Q ss_pred EEEEEeC--------CCCceee----------------------------chhhh------hcC--------CC-CCCHH
Q 048097 172 AFAGFSS--------QFPGVIT----------------------------IADTV------FGA--------NP-PINPD 200 (224)
Q Consensus 172 ~l~~~~s--------~~pg~~~----------------------------~~~~l------f~~--------~p-~~p~~ 200 (224)
++ .++. ++|.... ++..+ ++. .- +++.+
T Consensus 95 v~-~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rla~~L~~l~~~~g~~~~~~~~i~~~~~t~~ 173 (238)
T 2bgc_A 95 AY-VIKINELKELLSKNLTHFFYVFQTLQKQVSYSLAKFNDFSINGKLGSICSQLLILTYVYGKETPDGIKITLDNLTMQ 173 (238)
T ss_dssp EE-EEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHEEEETTEEEECCSCCCHH
T ss_pred EE-EEeHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhCCCCCCceEEEeccCCHH
Confidence 54 3331 2443210 01111 110 11 48899
Q ss_pred HHHhhcCCCH-HHHHHhhhhhc
Q 048097 201 FLGKAFQLDP-KIVKDLQDKFI 221 (224)
Q Consensus 201 vLa~af~~~~-~~v~~l~~~~~ 221 (224)
-||..+|++. +.+.++.+++.
T Consensus 174 ~lA~~lG~sr~etvsR~l~~l~ 195 (238)
T 2bgc_A 174 ELGYSSGIAHSSAVSRIISKLK 195 (238)
T ss_dssp HHHHHTTCCCHHHHHHHHHHHH
T ss_pred HHHHHhCCChHHHHHHHHHHHH
Confidence 9999999999 78888777654
No 210
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=68.55 E-value=5 Score=35.42 Aligned_cols=35 Identities=20% Similarity=0.309 Sum_probs=28.5
Q ss_pred CeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEE
Q 048097 139 NTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAF 173 (224)
Q Consensus 139 ~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l 173 (224)
=.++..+=++||.+++++|..|+.+|.|-.-.+.+
T Consensus 276 IPvyr~~QkpGd~Vi~~PgayH~v~n~G~~~n~aw 310 (332)
T 2xxz_A 276 IPVYRFVQRPGDLVWINAGTVHWVQATGWCNNIAW 310 (332)
T ss_dssp CCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEE
T ss_pred CCeEEEEECCCCEEEECCCceEEEEecceeeEEEE
Confidence 44677888999999999999999999997444333
No 211
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=67.74 E-value=4.2 Score=36.56 Aligned_cols=23 Identities=22% Similarity=0.186 Sum_probs=20.0
Q ss_pred eEEEEecCCCEEEEcCCCeeEEE
Q 048097 141 LIAKVLNKGDVFVFPIGLIHFQV 163 (224)
Q Consensus 141 ~~~~~l~~GDv~v~P~G~~H~~~ 163 (224)
+....|++||.+++|+|.+|...
T Consensus 239 Ln~v~l~pGd~~fipAG~~HAy~ 261 (394)
T 2wfp_A 239 LNVVKLNPGEAMFLFAETPHAYL 261 (394)
T ss_dssp EEEEEECTTCEEEECTTCCEEEE
T ss_pred heEEECCCCCEEEcCCCCceEcC
Confidence 34578999999999999999974
No 212
>3m3i_A Putative uncharacterized protein; PFAM:PF06172, structural genomics, structural genomics of pathogenic protozoa consortium, SGPP; 2.35A {Leishmania major}
Probab=64.51 E-value=61 Score=26.91 Aligned_cols=114 Identities=13% Similarity=0.194 Sum_probs=70.1
Q ss_pred EEEEEEEcCCCcCCCccCC-CCcEEEEEEecE-EEEEEEeCCCCC-------------------------CeeEEEEe--
Q 048097 96 SAVRIDYAPYGQNPPHTHP-RATEILVVLEGT-LYVGFVTSNQLN-------------------------NTLIAKVL-- 146 (224)
Q Consensus 96 s~~~v~l~pgg~~ppH~Hp-~a~Ei~~Vl~G~-~~v~~v~~~~~~-------------------------~k~~~~~l-- 146 (224)
+....-|.+|.. -|||. ++.|+.+...|. +++.++.+++.. .+..+.+|
T Consensus 61 TaIYfLL~~g~~--S~~HRv~sdEiW~~h~G~pL~l~li~~dG~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~LG~ 138 (225)
T 3m3i_A 61 TTIYFLCTPESP--SHLHRLCSDETWMYHAGDPLQLHVILKDPQDEDRIAAQPPAAPQAETDTADARPKYQVYRRVLVGA 138 (225)
T ss_dssp EEEEEEECSSSC--EEEEECSSEEEEEEEEESCEEEEEEESSSTTTTC------------------CCSSCEEEEEEESS
T ss_pred eeEEEEecCCCC--cccEEecCCEEEEEECCCCEEEEEEcCCCcccccccccccccccccccccccccccCceEEEEeCC
Confidence 444456677774 56663 588999999997 577777765200 03444555
Q ss_pred --cCCC--EEEEcCCCeeEEEeCCCC-----cEEEEEEEeCCCCceeechhhhhcCCCCCCHHHHHhhcCCCHHHHHHhh
Q 048097 147 --NKGD--VFVFPIGLIHFQVNIGKT-----SAVAFAGFSSQFPGVITIADTVFGANPPINPDFLGKAFQLDPKIVKDLQ 217 (224)
Q Consensus 147 --~~GD--v~v~P~G~~H~~~N~G~~-----~a~~l~~~~s~~pg~~~~~~~lf~~~p~~p~~vLa~af~~~~~~v~~l~ 217 (224)
.+|+ -++||+|.....+-.+++ .-.+++..- .||+..-. |.. .+.+-|.+.|.--++.|++|.
T Consensus 139 d~~~Ge~pQ~vVP~G~WqaA~~~~~~~~~~~~~sLVsCtV--aPGFdF~D---Fel---~~~~~L~~~~P~~~~~I~~lt 210 (225)
T 3m3i_A 139 RVERGELLQYTVPGGAIFGSSVAADGADGQAGYSLVSCIV--SPGFDYRD---FEI---FTQAQLMELYPQHEAVIKQMA 210 (225)
T ss_dssp CGGGTCBSEEEECTTCEEEEECCSSSTTCSSSCEEEEEEE--ESCCCGGG---CEE---CBHHHHHHHCGGGHHHHHHHS
T ss_pred CccCCceeEEEeCCCEEEEEEECCCCcCcCCCeEEEEEEE--cCCccchh---cEe---cCHHHHHHHCchHHHHHHHhc
Confidence 4576 579999999888876643 333433332 24433211 332 456667777877778888876
Q ss_pred hh
Q 048097 218 DK 219 (224)
Q Consensus 218 ~~ 219 (224)
..
T Consensus 211 ~~ 212 (225)
T 3m3i_A 211 YE 212 (225)
T ss_dssp BC
T ss_pred hh
Confidence 43
No 213
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=63.56 E-value=14 Score=28.46 Aligned_cols=49 Identities=16% Similarity=0.207 Sum_probs=34.4
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEE
Q 048097 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~ 152 (224)
+....+.||..+-.-=. .+..+.+|++|++.+.. ++ ++ ....+.+||++
T Consensus 94 ~~~~~~~~ge~I~~~G~-~~~~ly~I~~G~v~~~~--~~---g~-~~~~l~~G~~f 142 (198)
T 2ptm_A 94 LEFEVFQPADYVIQEGT-FGDRMFFIQQGIVDIIM--SD---GV-IATSLSDGSYF 142 (198)
T ss_dssp CEEEEECTTCEEECTTS-CCSEEEEEEECCEEEEC--TT---SC-EEEEECTTCEE
T ss_pred ccceeeCCCCEEEECCC-cCcEEEEEEeCEEEEEe--cC---Ce-EEEEecCCCEe
Confidence 45677888886532222 35789999999998864 33 34 35789999987
No 214
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=62.12 E-value=70 Score=27.19 Aligned_cols=67 Identities=7% Similarity=-0.119 Sum_probs=44.8
Q ss_pred eEEEEEEEcCCCcCCCccCCCCcEEE-EEEecEEEEEEEeCCCCCCeeEEEEe--cC--------CCEEEEcCCCeeEEE
Q 048097 95 TSAVRIDYAPYGQNPPHTHPRATEIL-VVLEGTLYVGFVTSNQLNNTLIAKVL--NK--------GDVFVFPIGLIHFQV 163 (224)
Q Consensus 95 is~~~v~l~pgg~~ppH~Hp~a~Ei~-~Vl~G~~~v~~v~~~~~~~k~~~~~l--~~--------GDv~v~P~G~~H~~~ 163 (224)
+.+.+++|++|.......-. .|+. +.+.|++++.+. ++ ++.+ .. .|++++|+|.--.+.
T Consensus 29 ~~f~~~~L~~Ge~~~~~~~~--~E~~iv~l~G~~~V~~~------g~--~~~~~g~R~svF~~~~p~~lYvp~g~~v~i~ 98 (270)
T 2qjv_A 29 VGFDVWQLXAGESITLPSDE--RERCLVLVAGLASVXAA------DS--FFYRIGQRMSPFERIPAYSVYLPHHTEAXVT 98 (270)
T ss_dssp CEEEEEEECTTCEEEECCSS--EEEEEEEEESCEEEEET------TE--EEEEECCCSSGGGCSCCCEEEECSSCCEEEE
T ss_pred eEEEEEEecCCCEEEecCCC--cEEEEEEecceEEEEEC------CE--EEeccccccccccCCCCcEEEECCCCEEEEE
Confidence 67888899999987776553 4554 567899988763 23 2322 22 599999999944455
Q ss_pred eCCCCcEEEE
Q 048097 164 NIGKTSAVAF 173 (224)
Q Consensus 164 N~G~~~a~~l 173 (224)
..+ ++.+.
T Consensus 99 a~~--~~~~~ 106 (270)
T 2qjv_A 99 AET--DLELA 106 (270)
T ss_dssp ESS--SEEEE
T ss_pred ecC--CceEE
Confidence 443 45554
No 215
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=62.06 E-value=26 Score=28.47 Aligned_cols=54 Identities=17% Similarity=0.176 Sum_probs=37.3
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEE
Q 048097 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~ 152 (224)
+....+.+|..+-..-. .+..+.+|++|++.+.....++ +.......+.+||+|
T Consensus 180 ~~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~~~~~-~~~~~~~~l~~G~~f 233 (291)
T 2qcs_B 180 LEPVQFEDGQKIVVQGE-PGDEFFIILEGSAAVLQRRSEN-EEFVEVGRLGPSDYF 233 (291)
T ss_dssp CEEEEECTTCEEECTTS-CCCEEEEEEEEEEEEEEECSTT-SCEEEEEEECTTCEE
T ss_pred cEEEEECCCCEEEeCCc-cCCEEEEEEeCEEEEEEecCCC-CccEEEEEeCCCCEe
Confidence 45677888876543323 3678999999999997655441 023445789999988
No 216
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=59.33 E-value=16 Score=28.25 Aligned_cols=48 Identities=17% Similarity=0.118 Sum_probs=32.8
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEE
Q 048097 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~ 152 (224)
+....+.||..+-..=. .+.++.+|++|++.+. ..+ ++. ..+.+||++
T Consensus 95 ~~~~~~~~ge~I~~~g~-~~~~ly~I~~G~v~v~--~~~---g~~--~~l~~G~~f 142 (202)
T 3bpz_A 95 LKFEVFQPGDYIIREGT-IGKKMYFIQHGVVSVL--TKG---NKE--MKLSDGSYF 142 (202)
T ss_dssp CEEEEECTTCEEECTTS-BCCEEEEEEECEEEEE--CTT---SCC--EEEETTCEE
T ss_pred CCceEECCCCEEEECCC-cCCeEEEEeccEEEEE--ECC---CeE--EEEcCCCEe
Confidence 45567888886533222 2578999999999884 233 332 478999987
No 217
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=57.14 E-value=29 Score=25.14 Aligned_cols=48 Identities=25% Similarity=0.299 Sum_probs=32.9
Q ss_pred EEEEEcCCCcC-CCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEE
Q 048097 98 VRIDYAPYGQN-PPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVF 154 (224)
Q Consensus 98 ~~v~l~pgg~~-ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~ 154 (224)
....+++|..+ ... ..+..+.+|++|++.+.. . +. ....+.+||++-.
T Consensus 51 ~~~~~~~g~~i~~~g--~~~~~~y~i~~G~v~~~~--~----~~-~~~~~~~G~~fG~ 99 (160)
T 4f8a_A 51 QTVHCAPGDLIYHAG--ESVDSLCFVVSGSLEVIQ--D----DE-VVAILGKGDVFGD 99 (160)
T ss_dssp EEEEECTTCEEECTT--SBCCEEEEEEESEEEEEE--T----TE-EEEEEETTCEEEC
T ss_pred eeeeeCCCCEEEeCC--CCccEEEEEEeeEEEEEE--C----CE-EEEEecCCCEeCc
Confidence 44677777754 333 236799999999999864 1 22 3468899998843
No 218
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=57.13 E-value=21 Score=29.92 Aligned_cols=51 Identities=16% Similarity=0.089 Sum_probs=36.4
Q ss_pred EEEEEEcCCCcC-CCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEE
Q 048097 97 AVRIDYAPYGQN-PPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 97 ~~~v~l~pgg~~-ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~ 152 (224)
+....+++|..+ ...- .+..+.+|++|.+.+...+.+ ++.....+.+||++
T Consensus 36 ~~~~~~~~g~~i~~~G~--~~~~~y~i~~G~v~~~~~~~~---g~~~~~~~~~G~~f 87 (333)
T 4ava_A 36 VQPLRAAAGQVLLRQGE--PAVSFLLISSGSAEVSHVGDD---GVAIIARALPGMIV 87 (333)
T ss_dssp CEEEEECTTCEEECTTS--BCCCEEEEEECCEEEEEECTT---CCEEEEEECTTCEE
T ss_pred CeEEEECCCCEEEeCCC--cCCEEEEEEeeEEEEEEECCC---CcEEEEEecCCCEe
Confidence 345678887754 3332 256899999999999877665 33355788999987
No 219
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=54.39 E-value=25 Score=28.88 Aligned_cols=53 Identities=19% Similarity=0.283 Sum_probs=36.4
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEe-CCCCCCeeEEEEecCCCEE
Q 048097 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVT-SNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~-~~~~~~k~~~~~l~~GDv~ 152 (224)
+....+.+|..+-.- -..+..+.+|++|++.+.... .++ .......+.+||+|
T Consensus 180 ~~~~~~~~g~~I~~~-G~~~~~~yiI~~G~v~~~~~~~~~g--~~~~~~~l~~G~~f 233 (299)
T 3shr_A 180 LEETHYENGEYIIRQ-GARGDTFFIISKGKVNVTREDSPNE--DPVFLRTLGKGDWF 233 (299)
T ss_dssp CEEEEECTTCEEECT-TCEECEEEEEEESEEEEEECCSSSC--CCEEEEEEETTCEE
T ss_pred ccEEEECCCCEEEeC-CCCCCEEEEEEeeEEEEEEecCCCC--cceEEEEcCCCCEe
Confidence 356677888754322 223578999999999998765 231 34455789999988
No 220
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=54.14 E-value=10 Score=34.60 Aligned_cols=21 Identities=24% Similarity=0.235 Sum_probs=19.1
Q ss_pred EEEecCCCEEEEcCCCeeEEE
Q 048097 143 AKVLNKGDVFVFPIGLIHFQV 163 (224)
Q Consensus 143 ~~~l~~GDv~v~P~G~~H~~~ 163 (224)
...|++||.+++|+|.+|...
T Consensus 267 ~v~L~pGea~flpAg~~HAYl 287 (440)
T 1pmi_A 267 HVGLNKGEAMFLQAKDPHAYI 287 (440)
T ss_dssp EEEECTTCEEEECTTCCEEEE
T ss_pred eEecCCCCEEecCCCCccccC
Confidence 467999999999999999985
No 221
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=54.04 E-value=15 Score=34.34 Aligned_cols=35 Identities=20% Similarity=0.356 Sum_probs=28.4
Q ss_pred CeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEE
Q 048097 139 NTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAF 173 (224)
Q Consensus 139 ~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l 173 (224)
=.++..+=++||.+++++|..||.+|.|-.-.+.+
T Consensus 335 IPvyr~vQkpGd~Vi~~PgayH~v~n~G~~~n~aw 369 (531)
T 3avr_A 335 VPVYRFIQRPGDLVWINAGTVHWVQAIGWCNNIAW 369 (531)
T ss_dssp CCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEE
T ss_pred CCeEEEEECCCCEEEECCCceEEEEecceeeeeEE
Confidence 34667888999999999999999999997444333
No 222
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=54.00 E-value=4.5 Score=31.78 Aligned_cols=54 Identities=13% Similarity=0.088 Sum_probs=36.1
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEE
Q 048097 98 VRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVF 154 (224)
Q Consensus 98 ~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~ 154 (224)
....+++|..+-..=. ....+.+|++|.+.+...++++ .+.....+.+||++-.
T Consensus 33 ~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~~~~G--~~~~~~~~~~g~~~G~ 86 (227)
T 3dkw_A 33 DLVNLDKGAYVFRQGE-PAHAFYYLISGCVKIYRLTPEG--QEKILEVTNERNTFAE 86 (227)
T ss_dssp EEEECCTTEEEECTTS-BCCEEEEEEESCEECCBCCGGG--CCBCCCEECTTEEESC
T ss_pred EEEEECCCCEEEcCCC-ccceEEEEEeCEEEEEEECCCC--CEEEEEEcCCCCEeee
Confidence 4566777775433222 2578999999999987665542 3333467899998853
No 223
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=53.58 E-value=13 Score=34.69 Aligned_cols=33 Identities=21% Similarity=0.320 Sum_probs=27.3
Q ss_pred eeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEE
Q 048097 140 TLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVA 172 (224)
Q Consensus 140 k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~ 172 (224)
.++..+=++||.+++++|..||.+|.|-..-+.
T Consensus 311 Pvyr~iQkPGdfVit~PgtyH~Vqs~Gf~~nia 343 (510)
T 4ask_A 311 PVYRFVQRPGDLVWINAGTVHWVQATGWCNNIA 343 (510)
T ss_dssp CCEEEEECTTCEEEECTTCEEEEEESSSEEEEE
T ss_pred CeEEEEECCCCEEEECCCceEEEEecCeeeeeE
Confidence 466778899999999999999999999743333
No 224
>1znp_A Hypothetical protein ATU3615; NESG, ATR55, Q8U9W0, structural genomics, PSI, protein struc initiative; 2.50A {Agrobacterium tumefaciens str} SCOP: b.82.1.16
Probab=53.44 E-value=78 Score=24.66 Aligned_cols=87 Identities=14% Similarity=0.124 Sum_probs=54.9
Q ss_pred CCCeeEEEccccccCcccccceEEEEEEEcCCCcCCCccCC--CCcEEEEEEecE-EEEEEEeCCCCCCeeEEEEe----
Q 048097 74 RLGFNVTNANVEQIPGLNTLGTSAVRIDYAPYGQNPPHTHP--RATEILVVLEGT-LYVGFVTSNQLNNTLIAKVL---- 146 (224)
Q Consensus 74 ~~g~~v~~~~~~~~p~L~~lgis~~~v~l~pgg~~ppH~Hp--~a~Ei~~Vl~G~-~~v~~v~~~~~~~k~~~~~l---- 146 (224)
+-|+..++...+...+-... .+....-|.+|.. -|||. ++.|+.+...|. +++.+..++ ++..+.+|
T Consensus 20 PEGG~yrEt~Rs~~~~~R~~-~TaIYfLL~~g~~--S~wHRv~~sdEiW~~h~G~pL~l~~~~~d---g~~~~~~LG~d~ 93 (154)
T 1znp_A 20 PEGGFYHQTFRDKAGGERGH-STAIYYLLEKGVR--SHWHRVTDAVEVWHYYAGAPIALHLSQDG---REVQTFTLGPAI 93 (154)
T ss_dssp TTSSEEEEEEECSSSTTTCS-CEEEEEEEESSCC--EEEEEETTSCEEEEEEEESCEEEEEESSS---SCCEEEEESSCT
T ss_pred CCCccEEEEEeCCCCCCCcc-eeEEEEEecCCCC--CcceeccCCCEEEEeECCCCEEEEEEcCC---CcEEEEEeCCCc
Confidence 45666666554433222222 3333344666664 55554 489999999997 777777665 34444555
Q ss_pred cCCCE--EEEcCCCeeEEEeCC
Q 048097 147 NKGDV--FVFPIGLIHFQVNIG 166 (224)
Q Consensus 147 ~~GDv--~v~P~G~~H~~~N~G 166 (224)
.+|+. ++||+|.....+..|
T Consensus 94 ~~Ge~pQ~vVP~G~WqaA~~~g 115 (154)
T 1znp_A 94 LEGERPQVIVPANCWQSAESLG 115 (154)
T ss_dssp TTTEESEEEECTTCEEEEEESS
T ss_pred ccCcccEEEEcCCEEEEeeECC
Confidence 55764 899999999887664
No 225
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=50.64 E-value=44 Score=29.50 Aligned_cols=52 Identities=8% Similarity=-0.028 Sum_probs=36.2
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEE
Q 048097 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~ 152 (224)
+....+.+|..+--.=. .+..+++|++|++.+.. ..++ .......+.+||+|
T Consensus 168 ~~~~~~~~Ge~I~~qGd-~~d~~YiI~sG~v~v~~-~~~G--~~~~v~~l~~G~~f 219 (416)
T 3tnp_B 168 MFEKLVKEGEHVIDQGD-DGDNFYVIDRGTFDIYV-KCDG--VGRCVGNYDNRGSF 219 (416)
T ss_dssp CEEEEECTTCEEECTTS-CCCEEEEEEECEEEEEE-ECSS--CEEEEEEEESCCEE
T ss_pred cEEEEeCCCCEEEeCCC-CCceEEEEEeeEEEEEE-ecCC--CEEEEEEecCCCEE
Confidence 55677888876533323 36799999999999876 3332 34445689999977
No 226
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=49.39 E-value=43 Score=24.33 Aligned_cols=48 Identities=17% Similarity=0.234 Sum_probs=33.3
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEE
Q 048097 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~ 152 (224)
+....+.+|..+-.- ...+..+.+|++|.+.+.. + ++. ...+.+||++
T Consensus 61 ~~~~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~~---~---~~~-~~~~~~G~~f 108 (154)
T 3pna_A 61 MFPVSFIAGETVIQQ-GDEGDNFYVIDQGEMDVYV---N---NEW-ATSVGEGGSF 108 (154)
T ss_dssp CEEEEECTTCEEECT-TSCCCEEEEEEESCEEEEE---T---TEE-EEEECTTCEE
T ss_pred ceEEEECCCCEEEeC-CCCCCeEEEEEecEEEEEE---C---CEE-EEEecCCCEe
Confidence 445778888865322 2236799999999999875 2 342 3568999987
No 227
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=48.42 E-value=63 Score=28.77 Aligned_cols=45 Identities=18% Similarity=0.045 Sum_probs=37.3
Q ss_pred EEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcE
Q 048097 120 LVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSA 170 (224)
Q Consensus 120 ~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a 170 (224)
..|++|++++....++ .-.+..|+++|..++-+-+.|.+. |....
T Consensus 358 Y~v~~G~lTL~W~~~d----Gt~~a~L~PDgSAwv~PFV~H~w~--G~GtV 402 (443)
T 3g7d_A 358 YVVTEGRLTLEWDGPD----GPASVELEPDGSAWTGPFVRHRWH--GTGTV 402 (443)
T ss_dssp EEEEESCEEEEEEETT----EEEEEEECTTCEEEECTTCCEEEE--SSEEE
T ss_pred EEEecCceEEEecCCC----CccceEECCCCceeeccccccccc--CCceE
Confidence 5589999999997765 447899999999999999999996 55433
No 228
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=48.01 E-value=23 Score=25.16 Aligned_cols=48 Identities=15% Similarity=0.140 Sum_probs=31.7
Q ss_pred EEEEEEc-CCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEE
Q 048097 97 AVRIDYA-PYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 97 ~~~v~l~-pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~ 152 (224)
+....+. +|..+- +....+..+++|++|++.+.- .+ ++. ..+.+||++
T Consensus 39 ~~~~~~~~~g~~i~-~~g~~~~~~y~i~~G~v~~~~--~~---g~~--~~l~~G~~f 87 (134)
T 2d93_A 39 MIFEVVEQAGAIIL-EDGQELDSWYVILNGTVEISH--PD---GKV--ENLFMGNSF 87 (134)
T ss_dssp EEEEEECSSSCEEE-CTTCEECEEEECCBSCEEEEC--SS---SCE--EEECTTCEE
T ss_pred heEEEecCCCCEEE-eCCCCCCeEEEEEeCEEEEEc--CC---CcE--EEecCCCcc
Confidence 3456777 776542 222335789999999999862 33 443 668999977
No 229
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=47.76 E-value=49 Score=23.45 Aligned_cols=48 Identities=15% Similarity=0.166 Sum_probs=32.5
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEE
Q 048097 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~ 152 (224)
+....+.+|..+-.- ...+..+.+|++|++.+.- + ++ ....+.+||++
T Consensus 46 ~~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~---~---g~-~~~~~~~G~~f 93 (139)
T 3ocp_A 46 MYPVEYGKDSCIIKE-GDVGSLVYVMEDGKVEVTK---E---GV-KLCTMGPGKVF 93 (139)
T ss_dssp CEEEEECSSCEEECT-TSCCCEEEEEEECCEEEEE---T---TE-EEEEECTTCEE
T ss_pred cEEEecCCCCEEEeC-CCcCCEEEEEEeCEEEEEE---C---CE-EEEEeCCCCEe
Confidence 345677887754222 2236789999999998832 2 34 34678999987
No 230
>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A
Probab=45.46 E-value=22 Score=25.13 Aligned_cols=45 Identities=18% Similarity=0.141 Sum_probs=30.9
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEE
Q 048097 98 VRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 98 ~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~ 152 (224)
....+++|..+-.--. .+..+.+|++|++.+... + ...+.+||++
T Consensus 35 ~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~------~---~~~~~~G~~~ 79 (138)
T 1vp6_A 35 RARTVPAGAVICRIGE-PGDRMFFVVEGSVSVATP------N---PVELGPGAFF 79 (138)
T ss_dssp EEEEECTTCEEECTTS-CCCEEEEEEESCEEECSS------S---CEEECTTCEE
T ss_pred cEEEeCCCCEEEeCCC-CcceEEEEEeeEEEEEeC------C---cceECCCCEe
Confidence 4567888886533222 257899999999988532 2 2468888876
No 231
>1xsq_A Ureidoglycolate hydrolase; northeast structural genomics consortium, NESG, structural genomics, protein structure initiative, PSI, ET81, X-RAY; 1.60A {Escherichia coli} SCOP: b.82.1.14 PDB: 1xsr_A 1yqc_A
Probab=45.10 E-value=48 Score=26.07 Aligned_cols=67 Identities=16% Similarity=0.144 Sum_probs=46.8
Q ss_pred CCccCCCCcEEEEEEecEEEEEEEeCCCC---CCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEEEE
Q 048097 109 PPHTHPRATEILVVLEGTLYVGFVTSNQL---NNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAFAG 175 (224)
Q Consensus 109 ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~---~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l~~ 175 (224)
..=.||..+|.+.-+.|...+-++.++++ -+++..+...+|+.+.+-+|.+|.-.-.-+++..++.+
T Consensus 70 ~lERHp~~sQafiPl~~~~~lVvVA~~~~~Pd~~~lrAF~~~ggqgV~y~~GtWH~pl~~l~~~~~F~vv 139 (168)
T 1xsq_A 70 ELERHPLGTQAFIPMKGEVFVVVVALGDDKPDLSTLRAFITNGEQGVNYHRNVWHHPLFAWQRVTDFLTI 139 (168)
T ss_dssp EEEECTTBCEEEEESBCCCCEEEEEECSSSCEEEEEEEEECCSSCEEEECTTCEECCCCBSSSCEEEEEE
T ss_pred EEeeCCCCceEEEECCCCEEEEEEeCCCCCCChhheEEEEecCCeEEEeCCCceecccccCCCcceEEEE
Confidence 34468889999999999866555544310 13466789999999999999999964333445555533
No 232
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=45.06 E-value=38 Score=29.80 Aligned_cols=56 Identities=16% Similarity=0.063 Sum_probs=37.9
Q ss_pred EEEEEEcCCCcC-CCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEE
Q 048097 97 AVRIDYAPYGQN-PPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVF 154 (224)
Q Consensus 97 ~~~v~l~pgg~~-ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~ 154 (224)
+....+++|..+ ... ..+..+++|++|++.+...+.++.+.+.....+.+||+|-.
T Consensus 65 ~~~~~~~~g~~i~~~G--d~~~~~y~i~~G~v~v~~~~~~g~~~~~~~~~~~~G~~fGe 121 (469)
T 1o7f_A 65 GYYENLEKGITLFRQG--DIGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFGE 121 (469)
T ss_dssp CEEEEECTTCEEECTT--SBCCEEEEEEESCEEEEECSSSCGGGCEEEEEECTTCEECG
T ss_pred ceEEEECCCCEEEeCC--CCCCcEEEEEeeEEEEEEecCCCCCcceEEEEccCCCCcch
Confidence 345678888754 333 23578999999999998766552101245678999998843
No 233
>1s4c_A Protein HI0227; double-stranded beta-helix, structural genomics, unknown function, structural genomics, unknown function; 2.20A {Haemophilus influenzae} SCOP: b.82.2.7 PDB: 1jop_A
Probab=43.86 E-value=46 Score=25.43 Aligned_cols=57 Identities=12% Similarity=0.044 Sum_probs=40.3
Q ss_pred CCCccCCCCcEEEEEEecEEEEEEEeCCC----------C--------CCeeEEEEecCCCEEEEcCCCeeEEEe
Q 048097 108 NPPHTHPRATEILVVLEGTLYVGFVTSNQ----------L--------NNTLIAKVLNKGDVFVFPIGLIHFQVN 164 (224)
Q Consensus 108 ~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~----------~--------~~k~~~~~l~~GDv~v~P~G~~H~~~N 164 (224)
..+=.|.+--.+-|+++|+=++++..... + +.......|++|+..+|-++.+|.-..
T Consensus 60 ~~~E~Hr~YiDIq~~l~G~E~i~~~~~~~~~~~~~~y~~e~D~~~~~~~~~~~~v~l~~G~FaiFfP~d~H~p~~ 134 (155)
T 1s4c_A 60 KKAELHHEYLDVQVLIRGTENIEVGATYPNLSKYEDYNEADDYQLCADIDDKFTVTMKPKMFAVFYPYEPHKPCC 134 (155)
T ss_dssp SCEEECSSEEEEEEEEESCEEEEECCSCCCGGGSCCCBTTTTBEEESCCTTCEEEEECTTEEEEECTTCCEEEEE
T ss_pred cccccccceEEEEecceeeEEEEEEecccCcccCCCCCcCCCEEecCCCCccEEEEeCCCEEEEECCCccccccc
Confidence 45567888899999999988877653110 0 111124678999999999999998643
No 234
>2bdr_A Ureidoglycolate hydrolase; all beta protein, structural genomics, PSI, protein structur initiative, northeast structural genomics consortium; 1.60A {Pseudomonas putida} SCOP: b.82.1.14
Probab=43.73 E-value=58 Score=25.82 Aligned_cols=67 Identities=15% Similarity=0.101 Sum_probs=47.2
Q ss_pred CCccCCCCcEEEEEEecEEEEEEEeCCC---CCCeeEEEEecCCCEEEEcCCCeeEEEeCCCCcEEEEEE
Q 048097 109 PPHTHPRATEILVVLEGTLYVGFVTSNQ---LNNTLIAKVLNKGDVFVFPIGLIHFQVNIGKTSAVAFAG 175 (224)
Q Consensus 109 ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~---~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G~~~a~~l~~ 175 (224)
..=.||.++|.+.-+.|.-++-++.+.+ .-+++..+....|+.+.+-+|.+|.-.-.-+++..++.+
T Consensus 72 ~lERHp~~sQafiPl~~~~~lVvVAp~~~~Pd~~~lrAF~~~ggqgV~y~~GtWH~pl~~l~~~~dF~vv 141 (175)
T 2bdr_A 72 MLERHPLGSQAFIPLLGNPFLIVVAPVGDAPVSGLVRAFRSNGRQGVNYHRGVWHHPVLTIEKRDDFLVV 141 (175)
T ss_dssp EEEECTTBCEEEEESSCCCEEEEEECSSSSCCGGGCEEEEECSSCEEEECTTCEECSCEESSSEEEEEEE
T ss_pred EEeeCCCCceEEEECCCCEEEEEEeCCCCCCCccceEEEEeCCCeEEEeCCCceecccccCCCCceEEEE
Confidence 3456888999999999986555554432 113467899999999999999999753333345555433
No 235
>3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B
Probab=41.96 E-value=37 Score=26.31 Aligned_cols=50 Identities=24% Similarity=0.169 Sum_probs=34.2
Q ss_pred EEEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEE
Q 048097 96 SAVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFV 153 (224)
Q Consensus 96 s~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v 153 (224)
.+....+.||..+-.-=- .+.++.+|++|++.+.. + +. ....+.+||++=
T Consensus 97 ~~~~~~~~~ge~I~~~G~-~~~~ly~I~~G~v~v~~---~---~~-~~~~l~~G~~fG 146 (212)
T 3ukn_A 97 IIKTSFCAPGEFLIRQGD-ALQAIYFVCSGSMEVLK---D---NT-VLAILGKGDLIG 146 (212)
T ss_dssp HCEEEEECTTCEEECTTS-BCCEEEEEEECCEEEES---S---SC-EEEEECTTCEEE
T ss_pred HhheEEeCCCCEEEECCC-cccEEEEEEecEEEEEE---C---Ce-EEEEecCCCCcC
Confidence 345567888886532222 26799999999998863 2 32 246899999884
No 236
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=37.86 E-value=69 Score=31.60 Aligned_cols=56 Identities=16% Similarity=0.093 Sum_probs=38.5
Q ss_pred EEEEEEEcCCCcC-CCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEE
Q 048097 96 SAVRIDYAPYGQN-PPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFV 153 (224)
Q Consensus 96 s~~~v~l~pgg~~-ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v 153 (224)
.|....+++|-.+ ..- . .++.+++|++|++.+.+..+...+....-..+.+||.|=
T Consensus 64 ~m~ye~~~~Ge~IfrqG-d-~gd~fYIIlsGsV~V~i~~~~~~~~~~~v~~l~~G~sFG 120 (999)
T 4f7z_A 64 CGYYENLEKGITLFRQG-D-IGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFG 120 (999)
T ss_dssp HCEEEEECTTCEEECTT-S-CCCEEEEEEESEEEEEECSSSCTTSCEEEEEEETTCEEC
T ss_pred heEEEEECCCCEEEcCC-C-cCCEEEEEEeeEEEEEEecCCCCCCceeEEEecCCcchh
Confidence 5566678888753 433 3 378999999999999875443212334457899999873
No 237
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=36.69 E-value=34 Score=26.72 Aligned_cols=47 Identities=15% Similarity=0.101 Sum_probs=32.2
Q ss_pred EEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEE
Q 048097 98 VRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 98 ~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~ 152 (224)
....+++|..+-.-=. .+..+.+|++|++.+.. .+ .. ...+.+||++
T Consensus 31 ~~~~~~~g~~i~~~G~-~~~~~y~i~~G~v~v~~--~~---~~--~~~~~~g~~f 77 (246)
T 3of1_A 31 EEKSVPKGATIIKQGD-QGDYFYVVEKGTVDFYV--ND---NK--VNSSGPGSSF 77 (246)
T ss_dssp EEEEECTTCEEECTTC-CCCEEEEEEECCEEEES--TT---SC--CEEECTTCEE
T ss_pred ceEEECCCCEEEecCC-CCCEEEEEEeeEEEEEE--CC---EE--EEecCCCCee
Confidence 4567778775422223 36899999999999863 21 23 2688999998
No 238
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=33.15 E-value=65 Score=28.35 Aligned_cols=55 Identities=15% Similarity=0.100 Sum_probs=33.5
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCC----CCCCeeEEEEecCCCEE
Q 048097 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSN----QLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~----~~~~k~~~~~l~~GDv~ 152 (224)
+....+.+|..+-.- ...+..+++|++|++.+.....+ ..+.......+.+||+|
T Consensus 290 l~~~~~~~Ge~I~~e-Gd~~~~~yiI~sG~v~v~~~~~~~~~~~~g~~~~l~~l~~G~~f 348 (416)
T 3tnp_B 290 IGTKVYNDGEQIIAQ-GDLADSFFIVESGEVKITMKRKGKSEVEENGAVEIARCFRGQYF 348 (416)
T ss_dssp CEEEEECTTCEEECT-TSCCCEEEEEEEEEEEEECC------------CEEEEECTTCEE
T ss_pred ceEEEECCCCEEEeC-CCcCCEEEEEEeCEEEEEEecCCcccccCCceeEEEEeCCCCEe
Confidence 455677888754222 22368999999999998765432 00123345788999987
No 239
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=33.04 E-value=71 Score=24.76 Aligned_cols=49 Identities=14% Similarity=0.105 Sum_probs=32.8
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEE
Q 048097 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~ 152 (224)
+....+.+|..+-.-- ..+..+.+|++|++.+.... .. ....+.+||+|
T Consensus 148 ~~~~~~~~g~~i~~~g-~~~~~~y~I~~G~v~v~~~~-----~~-~~~~l~~g~~f 196 (246)
T 3of1_A 148 LDTKIYQPGETIIREG-DQGENFYLIEYGAVDVSKKG-----QG-VINKLKDHDYF 196 (246)
T ss_dssp CEEEEECTTCEEECTT-SBCCEEEEEEECEEEEEETT-----TE-EEEEEETTCEE
T ss_pred hheEEeCCCCEEEeCC-CcCCEEEEEEecEEEEEEcC-----Cc-eEEEcCCCCcc
Confidence 3456677777543222 23678999999999886432 22 34688999977
No 240
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=32.13 E-value=87 Score=25.18 Aligned_cols=48 Identities=17% Similarity=0.236 Sum_probs=33.8
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEE
Q 048097 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~ 152 (224)
+....+++|..+-..=. .+..+.+|++|++.+.. + ++ ....+.+||++
T Consensus 62 ~~~~~~~~g~~i~~~G~-~~~~~y~i~~G~v~~~~---~---g~-~~~~l~~G~~f 109 (291)
T 2qcs_B 62 MFPVSFIAGETVIQQGD-EGDNFYVIDQGEMDVYV---N---NE-WATSVGEGGSF 109 (291)
T ss_dssp CEEEEECTTCEEECTTS-BCCEEEEEEECCEEEEE---T---TE-EEEEECTTCEE
T ss_pred ccEEEECCCCEEEeCCC-CCceEEEEeeeEEEEEE---C---Ce-EEEEcCCCCcc
Confidence 35677888886533222 36789999999999865 2 33 24688999987
No 241
>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2
Probab=29.91 E-value=11 Score=26.99 Aligned_cols=49 Identities=16% Similarity=0.180 Sum_probs=28.7
Q ss_pred EEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEE--EecCCCEE
Q 048097 100 IDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAK--VLNKGDVF 152 (224)
Q Consensus 100 v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~--~l~~GDv~ 152 (224)
..+++|..+-. -...+..+.+|++|++.+. ...++ .+.... .+.+||++
T Consensus 32 ~~~~~g~~i~~-~G~~~~~~y~i~~G~v~~~-~~~~g--~~~~~~~~~l~~G~~f 82 (137)
T 1wgp_A 32 CLFTEKSYLVR-EGDPVNEMLFIIRGRLESV-TTDGG--RSGFYNRSLLKEGDFC 82 (137)
T ss_dssp CCBCTTEEEEC-TTSBCSEEEEEEECCCEEE-CCSSC--SSSSSCEEECCTTCBS
T ss_pred EEeCCCCEEEe-CCCCCCeEEEEEeeEEEEE-EcCCC--cceeeeeeeecCCCEe
Confidence 45566654321 1223578999999999954 33331 221113 78899976
No 242
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=27.91 E-value=95 Score=25.17 Aligned_cols=48 Identities=15% Similarity=0.177 Sum_probs=33.2
Q ss_pred EEEEEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEE
Q 048097 97 AVRIDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 97 ~~~v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~ 152 (224)
+....+.+|..+--.=.+ +..+.+|++|++.+.. + ++ ....+.+||++
T Consensus 62 ~~~~~~~~g~~i~~~G~~-~~~~yiI~~G~v~v~~---~---g~-~~~~~~~G~~f 109 (299)
T 3shr_A 62 MYPVEYGKDSCIIKEGDV-GSLVYVMEDGKVEVTK---E---GV-KLCTMGPGKVF 109 (299)
T ss_dssp CEEEEECTTCEEECTTCB-CCCEEEEEESCEEEEE---T---TE-EEEEECTTCEE
T ss_pred cCeEEECCCCEEEcCCCc-CceEEEEEEEEEEEEE---C---CE-EEEEeCCCCee
Confidence 455778888865333233 6789999999999842 2 33 24679999987
No 243
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=26.62 E-value=2.4e+02 Score=25.10 Aligned_cols=73 Identities=15% Similarity=0.048 Sum_probs=50.7
Q ss_pred EEEecC---------CCEEEEcCCCeeEEEeCCCCcEEEEEEEeCCCCce-----------------------e----ec
Q 048097 143 AKVLNK---------GDVFVFPIGLIHFQVNIGKTSAVAFAGFSSQFPGV-----------------------I----TI 186 (224)
Q Consensus 143 ~~~l~~---------GDv~v~P~G~~H~~~N~G~~~a~~l~~~~s~~pg~-----------------------~----~~ 186 (224)
..+|++ ||.++-|.-.+|..--.++.|+.+++--...|-.. . .+
T Consensus 156 wr~l~~~~~~~~w~~gdsyveps~cphty~l~~d~parivsyt~~s~l~~l~~e~n~w~~~a~e~~l~~l~~~~aagv~L 235 (443)
T 3g7d_A 156 WRVLHANHGGDRWITGDSYVEPSYCPHSYSLAGDAPARIVSYTAQSNISPLMTEANNWSTGAFEEALKALSGKVSAGSVL 235 (443)
T ss_dssp EEEECBCCSSCTTSCBCEEEECTTCCCEEEESSSSCEEEEEEECCCTTHHHHHHHTTSCHHHHHHHHHHHSSCCCHHHHH
T ss_pred heeeccCCCCCccccCCcccccccCCcccccccCCchheEeeccccchHHHHHhhcccccHHHHHHHHhhcccchHHHHH
Confidence 567777 99999999999999989999999986443222110 0 01
Q ss_pred hhhhhcCCCCCCHHHHHhhcCCCHHHHHHhh
Q 048097 187 ADTVFGANPPINPDFLGKAFQLDPKIVKDLQ 217 (224)
Q Consensus 187 ~~~lf~~~p~~p~~vLa~af~~~~~~v~~l~ 217 (224)
...+-.. +++.+-|++..|++.+.|..+-
T Consensus 236 R~ar~Re--glTQ~~LAe~TGIPq~hISeMe 264 (443)
T 3g7d_A 236 DLFLARR--AHTRTSAAEAAGVPPADLEAAL 264 (443)
T ss_dssp HHHHHHT--TCCHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHhc--CCCHHHHHHHhCCCHHHHHHHh
Confidence 1122222 5888899999999988775543
No 244
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=24.94 E-value=3.3e+02 Score=23.30 Aligned_cols=66 Identities=11% Similarity=0.097 Sum_probs=40.0
Q ss_pred EEEcCCCcCCCccCCCCcEEEE-EEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCC--CCcEEEE
Q 048097 100 IDYAPYGQNPPHTHPRATEILV-VLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIG--KTSAVAF 173 (224)
Q Consensus 100 v~l~pgg~~ppH~Hp~a~Ei~~-Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G--~~~a~~l 173 (224)
+.|+.|......+--...|+.+ .+.|.+++.+. ++ ++.|..-|.+++|+|.--...... ..++.+.
T Consensus 62 l~L~~~~~~~~~~fl~~rE~~iV~lgG~~~V~vd------g~--~f~lg~~dalYVp~G~~~v~~as~d~~~~a~fa 130 (289)
T 1ywk_A 62 LEIILDKELGVDYFLERRELGVINIGGPGFIEID------GA--KETMKKQDGYYIGKETKHVRFSSENPDNPAKFY 130 (289)
T ss_dssp EECCCSGGGTSSSTTTTEEEEEEECSSCEEEEET------TE--EEEECTTCEEEECTTCCCEEEEESCTTSCCCEE
T ss_pred EEcCCCceecccccCCCcEEEEEEccCeEEEEEC------CE--EEecCCCCEEEeCCCCeEEEEEecCCCCCeEEE
Confidence 4455554433332223456655 56788888753 33 358899999999999765554432 3445443
No 245
>2qn4_A RASI, alpha-amylase/subtilisin inhibitor; amylase inhibitor, alpha- amylase inhibitor, protease inhibitor, serine protease inhibitor; 1.80A {Oryza sativa subsp}
Probab=24.34 E-value=20 Score=29.14 Aligned_cols=29 Identities=28% Similarity=0.370 Sum_probs=4.8
Q ss_pred CchhHHHHHHHHHHHHhhhhhccCCCCCcc
Q 048097 1 MKAIQFLIGFALFALASSLASAYDPSPLQD 30 (224)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~d~~~~~d 30 (224)
|.+++++ +++++++++....+++++++-|
T Consensus 1 ~~~~~~~-~fLl~a~~~~~~~~a~~~pVlD 29 (200)
T 2qn4_A 1 MVSLRLP-LILLSLLAISFSCSAAPPPVYD 29 (200)
T ss_dssp -----------------------CCCBCBC
T ss_pred CccHHHH-HHHHHHHHhccccccCCCceEe
Confidence 5555442 2334444433233456677766
No 246
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=24.23 E-value=1.2e+02 Score=26.21 Aligned_cols=51 Identities=16% Similarity=0.151 Sum_probs=32.6
Q ss_pred EEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEE
Q 048097 100 IDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 100 v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~ 152 (224)
..+.+|..+-.- ...+..+.+|++|++.+.....++ +.......+.+||+|
T Consensus 274 ~~~~~ge~I~~e-Gd~~~~~yiI~~G~v~v~~~~~~~-~~~~~v~~l~~Gd~f 324 (381)
T 4din_B 274 VQFEDGEKIVVQ-GEPGDDFYIITEGTASVLQRRSPN-EEYVEVGRLGPSDYF 324 (381)
T ss_dssp CCBCSSCBSSCT-TSBCCEEEEEEESCEEEECCSSSS-SCCCEEEEECTTCEE
T ss_pred ccCCCCCEEEeC-CCcCCEEEEEEeCEEEEEEecCCC-CceEEEEEeCCCCEe
Confidence 445566544222 223678999999999997654432 012335789999987
No 247
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=24.04 E-value=80 Score=29.05 Aligned_cols=51 Identities=18% Similarity=0.117 Sum_probs=37.5
Q ss_pred EEEEcCCCcCCCccCCC-CcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeE
Q 048097 99 RIDYAPYGQNPPHTHPR-ATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHF 161 (224)
Q Consensus 99 ~v~l~pgg~~ppH~Hp~-a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~ 161 (224)
|.++.+..+.+|-+|.+ .+|+++.+.|.-.. | ..-+.+|.+-+=|.+.+|-
T Consensus 347 Rw~v~e~TfrpPyyHrNv~SEfmgli~G~y~a----------k--~~Gf~pGg~SLH~~~~pHG 398 (471)
T 1eyb_A 347 RWGVADKTFRPPYYHRNCMSEFMGLIRGHYEA----------K--QGGFLPGGGSLHSTMTPHG 398 (471)
T ss_dssp EEECCSSSCCSCCCBCCSCEEEEEECCC--------------------CCTTCEEEECTTCCBC
T ss_pred ccCCCCCccCCCCCccchhhhhhhhccccccc----------c--ccCcCCCceeccCCCcCCC
Confidence 66889999999999965 45899999887533 1 1258999999999999995
No 248
>1pcq_O Groes protein; chaperone; HET: ADP; 2.81A {Escherichia coli} SCOP: b.35.1.1 PDB: 1gru_O 1aon_O* 1pf9_O* 1svt_O* 1sx4_O* 2c7c_O 2c7d_O
Probab=23.81 E-value=1.6e+02 Score=20.93 Aligned_cols=20 Identities=20% Similarity=0.380 Sum_probs=15.1
Q ss_pred CeeEEEEecCCCEEEEcCCC
Q 048097 139 NTLIAKVLNKGDVFVFPIGL 158 (224)
Q Consensus 139 ~k~~~~~l~~GDv~v~P~G~ 158 (224)
++.....++.||.++|++|.
T Consensus 52 G~~~p~~VkvGD~Vlf~k~y 71 (97)
T 1pcq_O 52 GEVKPLDVKVGDIVIFNDGY 71 (97)
T ss_dssp SSCEECSCCTTCEEEECCCS
T ss_pred CCEEecccCCCCEEEECCcc
Confidence 34445679999999999943
No 249
>1yll_A PA5104, conserved hypothetical protein; structural genomics, beta-BA PSI, protein structure initiative, midwest center for struc genomics; 1.64A {Pseudomonas aeruginosa} SCOP: b.82.1.17
Probab=22.21 E-value=82 Score=25.44 Aligned_cols=35 Identities=11% Similarity=0.054 Sum_probs=26.6
Q ss_pred CcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCC
Q 048097 116 ATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIG 157 (224)
Q Consensus 116 a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G 157 (224)
..-++|+++|++.+... + ++ ...|.+||.+++-..
T Consensus 140 ~~~~v~~l~G~~~v~~~--~---~~--~~~L~~~d~l~~~~~ 174 (200)
T 1yll_A 140 STLLLFAQQDGVAISLQ--G---QP--RGQLAAHDCLCAEGL 174 (200)
T ss_dssp SEEEEEESSSCEEEEET--T---EE--EEEECTTCEEEEESC
T ss_pred CEEEEEEccCcEEEEcC--C---Cc--eeecCCCCEEEEeCC
Confidence 46799999999988642 1 22 478999999998654
No 250
>2dkz_A Hypothetical protein LOC64762; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.65 E-value=59 Score=22.82 Aligned_cols=31 Identities=19% Similarity=0.338 Sum_probs=25.4
Q ss_pred chhhhhcCCCCCCHHHHHhhcCCCHHHHHHhhhh
Q 048097 186 IADTVFGANPPINPDFLGKAFQLDPKIVKDLQDK 219 (224)
Q Consensus 186 ~~~~lf~~~p~~p~~vLa~af~~~~~~v~~l~~~ 219 (224)
|...+|- .+++|+|..-|+++.-+++||.+-
T Consensus 45 IDG~lL~---~L~ee~L~edf~ls~Lq~kKi~~f 75 (84)
T 2dkz_A 45 IDGNLLV---QLTEEILSEDFKLSKLQVKKIMQF 75 (84)
T ss_dssp CCHHHHH---HCCHHHHHHTSCCCHHHHHHHHHH
T ss_pred cchHHHH---hCCHHHHHhhcCCCHHHHHHHHHH
Confidence 4456666 499999999999999999998763
No 251
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=21.39 E-value=1e+02 Score=25.59 Aligned_cols=22 Identities=18% Similarity=0.389 Sum_probs=18.4
Q ss_pred EEEecCCCEEEEcCCCeeEEEe
Q 048097 143 AKVLNKGDVFVFPIGLIHFQVN 164 (224)
Q Consensus 143 ~~~l~~GDv~v~P~G~~H~~~N 164 (224)
....++|++++||.+.+|...-
T Consensus 159 ~V~P~~G~~v~F~s~~lH~v~p 180 (243)
T 3dkq_A 159 SIKLSAGSLVLYPSSSLHQVTP 180 (243)
T ss_dssp EECCCTTCEEEEETTSEEEECC
T ss_pred EEecCCCEEEEECCCCeEcCcc
Confidence 3456899999999999999754
No 252
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=20.99 E-value=1.5e+02 Score=25.88 Aligned_cols=46 Identities=17% Similarity=0.180 Sum_probs=31.7
Q ss_pred EEEcCCCcCCCccCCCCcEEEEEEecEEEEEEEeCCCCCCeeEEEEecCCCEE
Q 048097 100 IDYAPYGQNPPHTHPRATEILVVLEGTLYVGFVTSNQLNNTLIAKVLNKGDVF 152 (224)
Q Consensus 100 v~l~pgg~~ppH~Hp~a~Ei~~Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~ 152 (224)
..+++|..+-..=. .+..+++|++|++.+... . .. ....+.+||+|
T Consensus 364 ~~~~~g~~i~~~G~-~~~~~yiI~~G~v~v~~~--~---~~-~~~~l~~G~~f 409 (469)
T 1o7f_A 364 SHAKGGTVLFNQGE-EGTSWYIILKGSVNVVIY--G---KG-VVCTLHEGDDF 409 (469)
T ss_dssp EECSTTCEEECTTS-CCCEEEEEEESEEEEEET--T---TE-EEEEEETTCEE
T ss_pred eEecCCCEEEeCCC-cCCeEEEEEEeEEEEEEc--C---Ce-eEEEecCCCEE
Confidence 46788876533222 367899999999998642 1 22 34688999977
No 253
>1tc3_C Protein (TC3 transposase); DNA binding, helix-turn-helix, TC1/mariner family, complex (transposase/DNA), DNA binding protein/DNA complex; HET: DNA; 2.45A {Caenorhabditis elegans} SCOP: a.4.1.2
Probab=20.55 E-value=90 Score=17.40 Aligned_cols=26 Identities=0% Similarity=0.034 Sum_probs=22.6
Q ss_pred CCCHHHHHhhcCCCHHHHHHhhhhhc
Q 048097 196 PINPDFLGKAFQLDPKIVKDLQDKFI 221 (224)
Q Consensus 196 ~~p~~vLa~af~~~~~~v~~l~~~~~ 221 (224)
+++..-+++.++++..+|.+..+.+.
T Consensus 21 g~s~~~IA~~lgis~~Tv~~~~~~~~ 46 (51)
T 1tc3_C 21 NVSLHEMSRKISRSRHCIRVYLKDPV 46 (51)
T ss_dssp TCCHHHHHHHHTCCHHHHHHHHHCST
T ss_pred CCCHHHHHHHHCcCHHHHHHHHhhHH
Confidence 58899999999999999998877654
No 254
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=20.35 E-value=1.1e+02 Score=26.09 Aligned_cols=50 Identities=14% Similarity=0.052 Sum_probs=33.4
Q ss_pred CcEEEE-EEecEEEEEEEeCCCCCCeeEEEEecCCCEEEEcCCCeeEEEeCC--CCcEEEE
Q 048097 116 ATEILV-VLEGTLYVGFVTSNQLNNTLIAKVLNKGDVFVFPIGLIHFQVNIG--KTSAVAF 173 (224)
Q Consensus 116 a~Ei~~-Vl~G~~~v~~v~~~~~~~k~~~~~l~~GDv~v~P~G~~H~~~N~G--~~~a~~l 173 (224)
..|+.+ .+.|.+++.+. ++ ++.|..-|.+++|+|.-....... ..++.+.
T Consensus 78 ~rE~~iV~l~G~~~V~vd------G~--~f~lg~~dalYVp~g~~~v~~as~da~~~a~fa 130 (282)
T 1xru_A 78 RRELGVINIGGAGTITVD------GQ--CYEIGHRDALYVGKGAKEVVFASIDTGTPAKFY 130 (282)
T ss_dssp TEEEEEEECSSCEEEEET------TE--EEEECTTCEEEECTTCCCEEEEESCTTSCCCEE
T ss_pred CcEEEEEEccCeEEEEEC------CE--EEecCCCCEEEeCCCCeEEEEEecCCCCCeEEE
Confidence 456655 56788888753 33 358899999999999865554433 2355543
Done!