Query 048100
Match_columns 161
No_of_seqs 126 out of 2051
Neff 10.6
Searched_HMMs 29240
Date Mon Mar 25 10:37:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048100.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048100hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 6.5E-32 2.2E-36 177.7 15.5 144 2-156 5-164 (169)
2 2jab_A H10-2-G3; HER2, darpin, 100.0 1E-28 3.5E-33 156.8 14.9 122 2-151 15-136 (136)
3 1d9s_A Cyclin-dependent kinase 100.0 2.5E-29 8.4E-34 159.7 10.3 123 2-153 13-136 (136)
4 3v31_A Ankyrin repeat family A 100.0 4.7E-28 1.6E-32 158.5 15.7 129 2-158 4-132 (167)
5 1ihb_A P18-INK4C(INK6), cyclin 100.0 3E-28 1E-32 158.5 14.2 140 2-153 6-162 (162)
6 1bi7_B P16INK4A, MTS1, multipl 100.0 5.2E-29 1.8E-33 161.6 10.6 129 2-159 13-142 (156)
7 4b93_B Ankyrin repeat domain-c 100.0 2.7E-28 9.2E-33 171.3 14.7 130 2-159 87-216 (269)
8 1n0r_A 4ANK, 4 ankyrin repeats 100.0 6.1E-28 2.1E-32 150.6 14.6 124 2-153 3-126 (126)
9 2y1l_E Darpin-8.4; hydrolase-i 100.0 9.4E-28 3.2E-32 157.5 16.1 128 2-157 15-142 (169)
10 3aji_A 26S proteasome non-ATPa 100.0 1.6E-27 5.4E-32 163.2 17.5 147 2-159 41-203 (231)
11 2xai_A ASB-9, ankyrin repeat a 100.0 1.2E-27 4.2E-32 167.0 17.0 143 2-155 4-161 (261)
12 1yyh_A HN1;, notch 1, ankyrin 100.0 9.2E-28 3.1E-32 166.9 16.2 148 2-159 58-221 (253)
13 2rfm_A Putative ankyrin repeat 100.0 1E-27 3.6E-32 160.2 15.0 129 2-158 36-164 (192)
14 1awc_B Protein (GA binding pro 100.0 1.9E-27 6.3E-32 153.7 15.5 129 2-159 3-131 (153)
15 2f8y_A Notch homolog 1, transl 100.0 5.2E-27 1.8E-31 159.9 17.8 148 2-159 26-189 (223)
16 3twr_A Tankyrase-2; ankyrin re 100.0 2E-27 6.7E-32 155.2 14.9 130 2-159 9-139 (165)
17 3v30_A DNA-binding protein rfx 100.0 2.2E-27 7.5E-32 156.0 15.2 141 3-154 4-161 (172)
18 1oy3_D Transcription factor in 100.0 2.2E-27 7.5E-32 166.6 15.7 148 3-160 47-257 (282)
19 3f6q_A Integrin-linked protein 100.0 4E-27 1.4E-31 155.8 15.3 127 2-156 6-133 (179)
20 1s70_B 130 kDa myosin-binding 100.0 9.4E-27 3.2E-31 164.9 17.1 147 2-159 41-263 (299)
21 1oy3_D Transcription factor in 100.0 6.1E-27 2.1E-31 164.4 15.6 147 2-159 10-223 (282)
22 2rfa_A Transient receptor pote 99.9 1.2E-26 4.3E-31 158.9 16.1 144 2-155 4-185 (232)
23 3d9h_A CDNA FLJ77766, highly s 99.9 1.9E-26 6.3E-31 163.0 17.4 143 2-155 60-217 (285)
24 3v30_A DNA-binding protein rfx 99.9 2.4E-27 8.1E-32 155.8 11.8 119 2-131 37-171 (172)
25 3b7b_A Euchromatic histone-lys 99.9 2.5E-26 8.6E-31 157.8 17.4 146 3-158 46-207 (237)
26 2xai_A ASB-9, ankyrin repeat a 99.9 2.2E-26 7.4E-31 160.7 17.0 146 2-159 37-197 (261)
27 3f6q_A Integrin-linked protein 99.9 4.9E-27 1.7E-31 155.4 12.4 130 2-159 40-169 (179)
28 2y1l_E Darpin-8.4; hydrolase-i 99.9 1.7E-26 5.8E-31 151.5 14.8 122 2-151 48-169 (169)
29 1awc_B Protein (GA binding pro 99.9 1.5E-26 5E-31 149.5 14.1 118 2-147 35-152 (153)
30 1k1a_A B-cell lymphoma 3-encod 99.9 5.4E-26 1.9E-30 156.3 17.6 146 3-158 48-213 (241)
31 1sw6_A Regulatory protein SWI6 99.9 5.7E-27 1.9E-31 168.7 13.2 150 2-159 132-314 (327)
32 2dzn_A Probable 26S proteasome 99.9 5.5E-26 1.9E-30 155.2 16.7 101 57-158 85-205 (228)
33 3hra_A Ankyrin repeat family p 99.9 3.2E-26 1.1E-30 153.7 15.2 147 2-159 6-176 (201)
34 3kea_A K1L; tropism, ANK repea 99.9 1.7E-26 5.7E-31 163.3 14.3 145 3-158 64-225 (285)
35 2vge_A RELA-associated inhibit 99.9 1.9E-27 6.6E-32 163.4 9.1 129 3-159 23-154 (229)
36 1ikn_D Protein (I-kappa-B-alph 99.9 1.8E-26 6E-31 158.7 13.9 143 2-154 46-210 (236)
37 1bd8_A P19INK4D CDK4/6 inhibit 99.9 2.1E-26 7.2E-31 149.0 13.3 136 2-149 3-154 (156)
38 3twr_A Tankyrase-2; ankyrin re 99.9 1.2E-26 4E-31 151.6 12.1 122 2-152 43-164 (165)
39 3aji_A 26S proteasome non-ATPa 99.9 9.5E-26 3.2E-30 154.4 17.2 147 2-159 7-170 (231)
40 3d9h_A CDNA FLJ77766, highly s 99.9 9.9E-26 3.4E-30 159.3 17.6 146 2-159 93-253 (285)
41 2dzn_A Probable 26S proteasome 99.9 1.1E-25 3.8E-30 153.6 17.1 148 2-159 3-172 (228)
42 1k1a_A B-cell lymphoma 3-encod 99.9 1.4E-25 4.9E-30 154.2 17.6 147 2-159 10-181 (241)
43 3utm_A Tankyrase-1; tankyrase, 99.9 1.4E-25 4.6E-30 161.7 17.8 93 2-105 59-151 (351)
44 2rfm_A Putative ankyrin repeat 99.9 3.4E-26 1.2E-30 152.8 13.6 122 2-151 69-190 (192)
45 3b7b_A Euchromatic histone-lys 99.9 1.3E-25 4.6E-30 154.2 16.8 147 2-159 12-175 (237)
46 3v31_A Ankyrin repeat family A 99.9 2.5E-26 8.6E-31 150.2 12.3 125 2-154 37-161 (167)
47 3ljn_A Hypothetical protein; a 99.9 5.5E-26 1.9E-30 165.3 15.3 148 2-159 21-242 (364)
48 3kea_A K1L; tropism, ANK repea 99.9 1.5E-26 5.1E-31 163.6 12.0 145 2-159 32-192 (285)
49 1n11_A Ankyrin; clathrin, BAND 99.9 1.3E-25 4.4E-30 166.8 17.4 145 2-157 15-175 (437)
50 3lvq_E ARF-GAP with SH3 domain 99.9 2.3E-26 7.9E-31 173.8 13.2 130 3-157 134-269 (497)
51 1ycs_B 53BP2, P53BP2; ankyrin 99.9 5.8E-27 2E-31 161.7 8.9 126 3-156 39-167 (239)
52 4hbd_A KN motif and ankyrin re 99.9 8E-26 2.7E-30 159.2 14.7 134 2-158 112-247 (276)
53 2pnn_A Transient receptor pote 99.9 5.1E-26 1.7E-30 159.6 13.7 135 2-157 102-263 (273)
54 3jxi_A Vanilloid receptor-rela 99.9 3.8E-26 1.3E-30 159.1 12.5 133 2-155 94-252 (260)
55 1yyh_A HN1;, notch 1, ankyrin 99.9 7.5E-26 2.5E-30 157.3 13.7 147 2-159 11-188 (253)
56 2etb_A Transient receptor pote 99.9 5.6E-26 1.9E-30 157.9 12.4 132 2-154 91-247 (256)
57 4b93_B Ankyrin repeat domain-c 99.9 3.9E-26 1.3E-30 160.3 11.3 147 3-159 13-183 (269)
58 2f8y_A Notch homolog 1, transl 99.9 3.4E-25 1.2E-29 150.8 15.6 144 2-156 59-219 (223)
59 2rfa_A Transient receptor pote 99.9 4E-25 1.4E-29 151.4 15.5 111 2-123 38-180 (232)
60 1n11_A Ankyrin; clathrin, BAND 99.9 2.4E-25 8.1E-30 165.4 15.4 147 2-159 213-375 (437)
61 3ehr_A Osteoclast-stimulating 99.9 2.3E-26 8E-31 156.9 8.6 129 2-158 74-203 (222)
62 4g8k_A 2-5A-dependent ribonucl 99.9 2.2E-25 7.4E-30 160.6 14.0 149 2-157 169-330 (337)
63 3hra_A Ankyrin repeat family p 99.9 5.1E-25 1.7E-29 147.8 14.9 119 31-159 2-138 (201)
64 1bd8_A P19INK4D CDK4/6 inhibit 99.9 2.3E-25 7.7E-30 144.1 12.7 108 2-122 37-154 (156)
65 3c5r_A BARD-1, BRCA1-associate 99.9 1.6E-26 5.6E-31 146.6 7.1 124 2-153 11-134 (137)
66 1ycs_B 53BP2, P53BP2; ankyrin 99.9 7.8E-26 2.7E-30 156.1 10.9 129 2-159 6-134 (239)
67 3aaa_C Myotrophin, protein V-1 99.9 6.2E-26 2.1E-30 141.5 9.2 111 2-140 8-118 (123)
68 1wdy_A 2-5A-dependent ribonucl 99.9 1.6E-24 5.4E-29 151.9 17.3 143 3-156 7-177 (285)
69 2fo1_E LIN-12 protein; beta-ba 99.9 4.6E-25 1.6E-29 161.2 14.8 148 2-159 167-344 (373)
70 1wdy_A 2-5A-dependent ribonucl 99.9 4.3E-25 1.5E-29 154.8 13.8 133 2-158 149-283 (285)
71 2etb_A Transient receptor pote 99.9 6.5E-25 2.2E-29 152.6 13.4 134 2-159 3-170 (256)
72 2b0o_E UPLC1; arfgap, structur 99.9 2.6E-25 8.8E-30 158.4 11.5 127 3-154 153-285 (301)
73 3t8k_A Uncharacterized protein 99.9 1.9E-26 6.4E-31 153.8 5.2 135 3-159 40-185 (186)
74 1ikn_D Protein (I-kappa-B-alph 99.9 4.9E-25 1.7E-29 151.5 12.4 125 2-137 79-228 (236)
75 3utm_A Tankyrase-1; tankyrase, 99.9 1.5E-24 5E-29 156.3 15.4 129 2-158 25-154 (351)
76 3ljn_A Hypothetical protein; a 99.9 3.4E-25 1.2E-29 161.1 12.0 126 2-154 139-270 (364)
77 1dcq_A PYK2-associated protein 99.9 1.1E-24 3.7E-29 153.6 14.1 127 3-154 132-264 (278)
78 3eu9_A Huntingtin-interacting 99.9 2.4E-24 8.2E-29 147.7 15.4 147 2-158 10-173 (240)
79 4g8k_A 2-5A-dependent ribonucl 99.9 2.3E-24 8E-29 155.2 15.9 140 2-158 26-199 (337)
80 3jxi_A Vanilloid receptor-rela 99.9 2.1E-25 7E-30 155.3 9.9 134 2-159 6-174 (260)
81 3deo_A Signal recognition part 99.9 1.7E-24 5.8E-29 143.7 12.9 136 2-150 45-181 (183)
82 3eu9_A Huntingtin-interacting 99.9 1.1E-23 3.6E-28 144.4 16.4 147 2-159 43-208 (240)
83 2pnn_A Transient receptor pote 99.9 1.5E-24 5.1E-29 152.1 10.4 126 2-155 55-220 (273)
84 3ui2_A Signal recognition part 99.9 5.5E-24 1.9E-28 147.3 13.0 137 2-151 46-183 (244)
85 1n0q_A 3ANK, 3 ankyrin repeats 99.9 7.1E-24 2.4E-28 126.0 11.5 93 33-153 1-93 (93)
86 3jue_A Arfgap with coiled-coil 99.9 4.4E-24 1.5E-28 155.7 12.2 123 2-152 200-325 (368)
87 3t8k_A Uncharacterized protein 99.9 1.4E-24 4.9E-29 144.6 8.4 132 3-160 8-153 (186)
88 2fo1_E LIN-12 protein; beta-ba 99.9 9.9E-24 3.4E-28 154.2 13.5 126 2-154 236-372 (373)
89 4hbd_A KN motif and ankyrin re 99.9 3.4E-24 1.2E-28 150.8 10.6 122 2-151 146-273 (276)
90 3c5r_A BARD-1, BRCA1-associate 99.9 1.1E-22 3.7E-27 128.9 12.2 103 29-159 5-107 (137)
91 2l6b_A NR1C; ankyrin, consensu 99.9 3.5E-23 1.2E-27 127.5 6.9 103 29-159 4-106 (115)
92 1d9s_A Cyclin-dependent kinase 99.9 1.3E-22 4.6E-27 128.4 9.2 106 25-159 3-109 (136)
93 3aaa_C Myotrophin, protein V-1 99.9 4.8E-22 1.6E-26 123.8 11.4 101 31-159 4-104 (123)
94 1n0q_A 3ANK, 3 ankyrin repeats 99.9 8E-22 2.8E-26 117.0 10.8 91 2-103 3-93 (93)
95 4gpm_A Engineered protein OR26 99.9 1.9E-21 6.5E-26 127.6 12.7 110 2-122 38-157 (169)
96 2jab_A H10-2-G3; HER2, darpin, 99.9 1.4E-21 4.9E-26 123.7 11.3 102 30-159 10-111 (136)
97 1s70_B 130 kDa myosin-binding 99.9 1.8E-21 6.1E-26 137.7 12.7 136 2-148 74-285 (299)
98 2aja_A Ankyrin repeat family p 99.9 7.9E-23 2.7E-27 149.5 4.3 142 2-155 93-252 (376)
99 2vge_A RELA-associated inhibit 99.9 7.6E-21 2.6E-25 130.4 13.7 115 17-159 1-118 (229)
100 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.3E-20 4.5E-25 117.1 12.8 98 33-158 1-98 (126)
101 3deo_A Signal recognition part 99.9 8.5E-23 2.9E-27 135.5 2.5 101 30-159 40-141 (183)
102 3ehr_A Osteoclast-stimulating 99.8 6.9E-21 2.3E-25 129.7 9.5 103 29-159 68-171 (222)
103 2l6b_A NR1C; ankyrin, consensu 99.8 3.7E-21 1.3E-25 118.3 7.4 103 2-132 10-112 (115)
104 1sw6_A Regulatory protein SWI6 99.8 2.5E-21 8.7E-26 139.2 7.3 117 6-150 102-227 (327)
105 1bi7_B P16INK4A, MTS1, multipl 99.8 4.9E-21 1.7E-25 123.9 7.6 103 28-159 6-109 (156)
106 2b0o_E UPLC1; arfgap, structur 99.8 1.1E-20 3.6E-25 134.6 9.8 106 2-141 191-299 (301)
107 3ui2_A Signal recognition part 99.8 1.6E-20 5.4E-25 129.9 9.1 101 30-159 41-142 (244)
108 2zgd_A 3 repeat synthetic anky 99.8 4.3E-20 1.5E-24 112.9 9.7 93 27-147 17-109 (110)
109 2aja_A Ankyrin repeat family p 99.8 2.4E-22 8.4E-27 146.9 -2.9 131 3-144 130-270 (376)
110 1ihb_A P18-INK4C(INK6), cyclin 99.8 3.6E-19 1.2E-23 115.4 10.7 109 2-122 39-158 (162)
111 2zgd_A 3 repeat synthetic anky 99.8 6.3E-18 2.2E-22 103.2 10.4 85 2-97 25-109 (110)
112 1dcq_A PYK2-associated protein 99.8 4E-18 1.4E-22 120.0 10.8 91 2-103 170-263 (278)
113 3jue_A Arfgap with coiled-coil 99.8 7.3E-18 2.5E-22 122.9 11.0 101 31-159 196-299 (368)
114 3lvq_E ARF-GAP with SH3 domain 99.7 9E-18 3.1E-22 126.9 10.3 92 2-104 172-266 (497)
115 1gp8_A Protein (scaffolding pr 76.0 1.6 5.5E-05 20.4 1.6 20 2-21 14-33 (40)
116 3zrh_A Ubiquitin thioesterase 30.3 1.7E+02 0.0058 21.8 7.2 59 86-149 30-90 (454)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=6.5e-32 Score=177.67 Aligned_cols=144 Identities=22% Similarity=0.276 Sum_probs=121.9
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcH
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSP 81 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 81 (161)
.++|+.|++.|+++.|+.|++.+.+++.+|..|.||||+| +..+ ..+++++|++.|++ ++..+..|+||
T Consensus 5 g~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a---~~~~-------~~~~~~~ll~~gad-~~~~d~~g~Tp 73 (169)
T 4gpm_A 5 GKRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHA---AENG-------HKEVVKLLISKGAD-VNAKDSDGRTP 73 (169)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH---HHTT-------CHHHHHHHHHTTCC-TTCCCTTSCCH
T ss_pred HHHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHH---HHcC-------CHHHHHHHHhcccc-hhhhccCCCCH
Confidence 4689999999999999999999999999999999999994 4444 48899999999988 57789999999
Q ss_pred HHHHHHhCCHHHHHHHHHhhhcCCch----------hhhcCchhHHHHHh------hccCCCCCcHhHHHHHcCCHHHHH
Q 048100 82 LHVAARYGHAAVVGALIEFAEKQPGQ----------ELESGVKSTTRYML------GMKNDEEDTALHEAVQSGSLDVVE 145 (161)
Q Consensus 82 l~~a~~~~~~~~~~~Ll~~g~~~~~~----------~~~~~~~~~~~~l~------~~~~~~g~t~l~~a~~~~~~~~~~ 145 (161)
||+|++.|+.+++++|+++|++++.. +...|+.+++++|+ +.+|..|+||||+|+..|+.++++
T Consensus 74 Lh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~ 153 (169)
T 4gpm_A 74 LHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVK 153 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHH
Confidence 99999999999999999999987655 45667777888886 568889999999999999999999
Q ss_pred HHHhCCCCCCC
Q 048100 146 ILLGADPAFPY 156 (161)
Q Consensus 146 ~Ll~~~~~~~~ 156 (161)
+|+++|+++..
T Consensus 154 ~Ll~~GA~ie~ 164 (169)
T 4gpm_A 154 LLEKQGGWLEH 164 (169)
T ss_dssp HHHTC------
T ss_pred HHHHCCCCcCC
Confidence 99999998864
No 2
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.96 E-value=1e-28 Score=156.78 Aligned_cols=122 Identities=23% Similarity=0.265 Sum_probs=112.2
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcH
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSP 81 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 81 (161)
.|+||+|+..|+.+.+++|++.+..++..|..|.||||+|+ ..+ ..+++++|++.+++ ++..+..|.||
T Consensus 15 ~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~---~~~-------~~~~v~~Ll~~g~~-~~~~d~~g~t~ 83 (136)
T 2jab_A 15 GKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLAT---AHG-------HLEIVEVLLKNGAD-VNAVDAIGFTP 83 (136)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH---HHT-------CHHHHHHHHHTTCC-TTCCCTTCCCH
T ss_pred cHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH---HcC-------CHHHHHHHHHcCCC-CCcCCCCCCCH
Confidence 48999999999999999999999999999999999999954 444 48999999999987 57789999999
Q ss_pred HHHHHHhCCHHHHHHHHHhhhcCCchhhhcCchhHHHHHhhccCCCCCcHhHHHHHcCCHHHHHHHHhCC
Q 048100 82 LHVAARYGHAAVVGALIEFAEKQPGQELESGVKSTTRYMLGMKNDEEDTALHEAVQSGSLDVVEILLGAD 151 (161)
Q Consensus 82 l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~l~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~ 151 (161)
||+|+..++.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 84 L~~A~~~~~~~~v~~Ll~~g~~-----------------~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 84 LHLAAFIGHLEIAEVLLKHGAD-----------------VNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCC-----------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHHHHcCCHHHHHHHHHcCCC-----------------CcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999999999999999988 7788999999999999999999999999876
No 3
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.96 E-value=2.5e-29 Score=159.67 Aligned_cols=123 Identities=21% Similarity=0.177 Sum_probs=114.3
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCC-CCc
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAK-GDS 80 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~-~~t 80 (161)
.||||.|+..|+.+.+++|++.+..++.++..|.||||+ ++. + ..+++++|++.+++ ++..+.. |+|
T Consensus 13 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~---A~~-~-------~~~~v~~Ll~~g~~-~~~~~~~~g~t 80 (136)
T 1d9s_A 13 DAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQV---MMM-G-------SAQVAELLLLHGAE-PNCADPATLTR 80 (136)
T ss_dssp SCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTT---STT-S-------CHHHHHHHHHHTCC-SSCCBTTTTBC
T ss_pred ccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHH---HHc-C-------CHHHHHHHHHCCCC-CCCcCCCCCCC
Confidence 589999999999999999999999999999999999999 455 5 48999999999988 5777888 999
Q ss_pred HHHHHHHhCCHHHHHHHHHhhhcCCchhhhcCchhHHHHHhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCCC
Q 048100 81 PLHVAARYGHAAVVGALIEFAEKQPGQELESGVKSTTRYMLGMKNDEEDTALHEAVQSGSLDVVEILLGADPA 153 (161)
Q Consensus 81 ~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~l~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~ 153 (161)
|||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..++.+++++|+++|+|
T Consensus 81 ~L~~A~~~~~~~~v~~Ll~~ga~-----------------~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 81 PVHDAAREGFLDTLVVLHRAGAR-----------------LDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHHTCCC-----------------CCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCC-----------------CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 99999999999999999999988 778899999999999999999999999998875
No 4
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=4.7e-28 Score=158.49 Aligned_cols=129 Identities=16% Similarity=0.129 Sum_probs=106.8
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcH
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSP 81 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 81 (161)
.||||.|+..|+++.+++|++.+...+..|..|.||||+| +..+ +.+++++|++.+++ ++..+..|.||
T Consensus 4 ~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A---~~~~-------~~~~v~~Ll~~g~~-~~~~~~~g~t~ 72 (167)
T 3v31_A 4 SLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWA---AAHG-------QIAVVEFLLQNGAD-PQLLGKGRESA 72 (167)
T ss_dssp CCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHH---HHTT-------CHHHHHHHHHTTCC-TTCCCTTCCCH
T ss_pred cchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHH---HHCC-------CHHHHHHHHHcCCC-CCCcCCCCCcH
Confidence 5899999999999999999999999999999999999995 4555 48999999999887 57779999999
Q ss_pred HHHHHHhCCHHHHHHHHHhhhcCCchhhhcCchhHHHHHhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCCCCCCCc
Q 048100 82 LHVAARYGHAAVVGALIEFAEKQPGQELESGVKSTTRYMLGMKNDEEDTALHEAVQSGSLDVVEILLGADPAFPYSA 158 (161)
Q Consensus 82 l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~l~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~ 158 (161)
||+|+..++.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++|++++.++
T Consensus 73 L~~A~~~~~~~~v~~Ll~~g~~-----------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 132 (167)
T 3v31_A 73 LSLACSKGYTDIVKMLLDCGVD-----------------VNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIET 132 (167)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCC-----------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHHHHcCCHHHHHHHHHCCCC-----------------CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC
Confidence 9999999999999999999988 55556666666666666666666666666666655443
No 5
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=3e-28 Score=158.54 Aligned_cols=140 Identities=21% Similarity=0.234 Sum_probs=118.7
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcH
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSP 81 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 81 (161)
.++|+.|++.|+.+.+++|++.+..++..+..|.||||+ ++. + ..+++++|++.+++ ++..+..|+||
T Consensus 6 ~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~---A~~-~-------~~~~v~~Ll~~g~~-~~~~~~~g~t~ 73 (162)
T 1ihb_A 6 GNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQV---MKL-G-------NPEIARRLLLRGAN-PDLKDRTGFAV 73 (162)
T ss_dssp HHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHH---CCS-S-------CHHHHHHHHHTTCC-TTCCCTTSCCH
T ss_pred hhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHH---HHc-C-------cHHHHHHHHHcCCC-CCCCCCCCCCH
Confidence 689999999999999999999999999999999999999 444 5 48999999999887 57779999999
Q ss_pred HHHHHHhCCHHHHHHHHHhhhcCCch----------hhhcCchhHHHHHh-------hccCCCCCcHhHHHHHcCCHHHH
Q 048100 82 LHVAARYGHAAVVGALIEFAEKQPGQ----------ELESGVKSTTRYML-------GMKNDEEDTALHEAVQSGSLDVV 144 (161)
Q Consensus 82 l~~a~~~~~~~~~~~Ll~~g~~~~~~----------~~~~~~~~~~~~l~-------~~~~~~g~t~l~~a~~~~~~~~~ 144 (161)
||+|+..|+.+++++|++.|++.+.. +...|+.+++++|+ +.++..|.||||+|+..|+.+++
T Consensus 74 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~ 153 (162)
T 1ihb_A 74 IHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVV 153 (162)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHH
Confidence 99999999999999999999876544 35566667777775 35667888888888888888888
Q ss_pred HHHHhCCCC
Q 048100 145 EILLGADPA 153 (161)
Q Consensus 145 ~~Ll~~~~~ 153 (161)
++|+++|+|
T Consensus 154 ~~Ll~~GAd 162 (162)
T 1ihb_A 154 SLMQANGAG 162 (162)
T ss_dssp HHHHHTC--
T ss_pred HHHHHhCCC
Confidence 888888875
No 6
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.96 E-value=5.2e-29 Score=161.60 Aligned_cols=129 Identities=21% Similarity=0.131 Sum_probs=112.9
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCc-
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDS- 80 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t- 80 (161)
.|+||.|+..|+.+.+++|++.+..++..+..|.||||+| + .+ ..+++++|++.|++ ++..+..|+|
T Consensus 13 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A---~-~~-------~~~~v~~Ll~~g~~-~~~~d~~g~tt 80 (156)
T 1bi7_B 13 ADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVM---M-MG-------SARVAELLLLHGAE-PNCADPATLTR 80 (156)
T ss_dssp TTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSS---C-TT-------CHHHHHHHHTTTCC-CCCCCTTTCCC
T ss_pred hHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH---H-cC-------CHHHHHHHHHcCCC-CCCcCCCCCcH
Confidence 5899999999999999999999999999999999999994 3 44 48999999999987 5778999999
Q ss_pred HHHHHHHhCCHHHHHHHHHhhhcCCchhhhcCchhHHHHHhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCCCCCCCcC
Q 048100 81 PLHVAARYGHAAVVGALIEFAEKQPGQELESGVKSTTRYMLGMKNDEEDTALHEAVQSGSLDVVEILLGADPAFPYSAN 159 (161)
Q Consensus 81 ~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~l~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 159 (161)
|||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++|++++.++.
T Consensus 81 pL~~A~~~~~~~~v~~Ll~~ga~-----------------~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 142 (156)
T 1bi7_B 81 PVHDAAREGFLDTLVVLHRAGAR-----------------LDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNH 142 (156)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTCC-----------------SSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC--------
T ss_pred HHHHHHHCCCHHHHHHHHHcCCC-----------------CcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCc
Confidence 99999999999999999999998 778899999999999999999999999999999876653
No 7
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.96 E-value=2.7e-28 Score=171.32 Aligned_cols=130 Identities=24% Similarity=0.259 Sum_probs=103.2
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcH
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSP 81 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 81 (161)
.||||+|+..|+.+.++.|++.+..++..+..|.||+|+|+ ..+ ..+++++|++.|++ ++..|..|+||
T Consensus 87 ~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~---~~~-------~~~~~~~Ll~~g~~-~n~~d~~g~Tp 155 (269)
T 4b93_B 87 SSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLAC---QQG-------HFQVVKCLLDSNAK-PNKKDLSGNTP 155 (269)
T ss_dssp CCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHH---HHT-------CHHHHHHHHHTTCC-SCCCCTTCCCH
T ss_pred CCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCcccccc---ccC-------hHHHHHHHHHCCCC-CCCCCCCCCCH
Confidence 36777777777777777777777777777777777777743 333 36777777777776 46667777788
Q ss_pred HHHHHHhCCHHHHHHHHHhhhcCCchhhhcCchhHHHHHhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCCCCCCCcC
Q 048100 82 LHVAARYGHAAVVGALIEFAEKQPGQELESGVKSTTRYMLGMKNDEEDTALHEAVQSGSLDVVEILLGADPAFPYSAN 159 (161)
Q Consensus 82 l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~l~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 159 (161)
||+|++.|+.+++++|++.|++ ++.++..|+||||+|+..|+.+++++|+++|+|++.++.
T Consensus 156 L~~A~~~g~~~~v~~Ll~~gad-----------------vn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~ 216 (269)
T 4b93_B 156 LIYACSGGHHELVALLLQHGAS-----------------INASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNK 216 (269)
T ss_dssp HHHHHHTTCGGGHHHHHHTTCC-----------------TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCT
T ss_pred HHHHHHCCCHHHHHHHHHCCCC-----------------CCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCC
Confidence 8888888888888888877777 677899999999999999999999999999999987654
No 8
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.96 E-value=6.1e-28 Score=150.61 Aligned_cols=124 Identities=30% Similarity=0.374 Sum_probs=114.6
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcH
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSP 81 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 81 (161)
.|+||.|++.|+.+.+++|++.+..++..+..|.||||+|+ ..+ ..+++++|++.+.+ ++..+..|.||
T Consensus 3 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~---~~~-------~~~~~~~Ll~~g~~-~~~~~~~g~t~ 71 (126)
T 1n0r_A 3 RTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAA---RNG-------HLEVVKLLLEAGAD-VNAKDKNGRTP 71 (126)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHH---HHT-------CHHHHHHHHHTTCC-TTCCCTTSCCH
T ss_pred ccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHH---HcC-------cHHHHHHHHHcCCC-CcccCCCCCcH
Confidence 58999999999999999999999999999999999999955 444 48999999999987 57778999999
Q ss_pred HHHHHHhCCHHHHHHHHHhhhcCCchhhhcCchhHHHHHhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCCC
Q 048100 82 LHVAARYGHAAVVGALIEFAEKQPGQELESGVKSTTRYMLGMKNDEEDTALHEAVQSGSLDVVEILLGADPA 153 (161)
Q Consensus 82 l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~l~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~ 153 (161)
||+|+..++.+++++|++.|.+ ++.+|..|.|||++|+..++.+++++|+++|+|
T Consensus 72 l~~A~~~~~~~~~~~Ll~~g~~-----------------~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 72 LHLAARNGHLEVVKLLLEAGAD-----------------VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC-----------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHHcChHHHHHHHHHcCCC-----------------CcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 9999999999999999999988 778899999999999999999999999999986
No 9
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=9.4e-28 Score=157.51 Aligned_cols=128 Identities=25% Similarity=0.335 Sum_probs=107.0
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcH
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSP 81 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 81 (161)
.++|++|++.|+.+.+++|++.+..++..|..|.||||+| +..+ ..+++++|++.+++ ++..+..|.||
T Consensus 15 ~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A---~~~~-------~~~~v~~Ll~~g~~-~~~~~~~g~t~ 83 (169)
T 2y1l_E 15 GKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLA---AFNG-------HLEIVEVLLKNGAD-VNAVDHAGMTP 83 (169)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH---HHTT-------CHHHHHHHHHTTCC-TTCCCTTSCCH
T ss_pred cchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH---HHcC-------CHHHHHHHHHcCCC-CCccCCCCCCH
Confidence 3789999999999999999999999999999999999995 4455 48999999999987 57779999999
Q ss_pred HHHHHHhCCHHHHHHHHHhhhcCCchhhhcCchhHHHHHhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCCCCCCC
Q 048100 82 LHVAARYGHAAVVGALIEFAEKQPGQELESGVKSTTRYMLGMKNDEEDTALHEAVQSGSLDVVEILLGADPAFPYS 157 (161)
Q Consensus 82 l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~l~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~ 157 (161)
||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|++.|++++.+
T Consensus 84 L~~A~~~~~~~~~~~Ll~~g~~-----------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 142 (169)
T 2y1l_E 84 LRLAALFGHLEIVEVLLKNGAD-----------------VNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQ 142 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC-----------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred HHHHHHcCCHHHHHHHHHcCCC-----------------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCc
Confidence 9999999999999999999988 5555666666666666666666666666666666544
No 10
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.96 E-value=1.6e-27 Score=163.23 Aligned_cols=147 Identities=19% Similarity=0.178 Sum_probs=112.1
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcH
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSP 81 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 81 (161)
.||||.|+..|+.+.+++|++.+..++..+..|.||||+|+ ..+ ..+++++|++++++ ++..+..|.||
T Consensus 41 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~---~~~-------~~~~v~~Ll~~g~~-~~~~~~~g~t~ 109 (231)
T 3aji_A 41 RTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAA---SAG-------XDEIVKALLVKGAH-VNAVNQNGCTP 109 (231)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHH---HHT-------CHHHHHHHHHTTCC-TTCCCTTSCCH
T ss_pred CCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHH---HcC-------HHHHHHHHHHcCCC-CCCCCCCCCCH
Confidence 46778888888888888887777777777777888888844 333 37788888888776 45667788888
Q ss_pred HHHHHHhCCHHHHHHHHHhhhcCCch----------hhhcCchhHHHHHh------hccCCCCCcHhHHHHHcCCHHHHH
Q 048100 82 LHVAARYGHAAVVGALIEFAEKQPGQ----------ELESGVKSTTRYML------GMKNDEEDTALHEAVQSGSLDVVE 145 (161)
Q Consensus 82 l~~a~~~~~~~~~~~Ll~~g~~~~~~----------~~~~~~~~~~~~l~------~~~~~~g~t~l~~a~~~~~~~~~~ 145 (161)
||+|+..++.+++++|++.|.+.... +...|..+++++|+ +.+|..|+||||+|+..|+.++++
T Consensus 110 L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 189 (231)
T 3aji_A 110 LHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAK 189 (231)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHH
Confidence 88888888888888888887765443 34566667777776 456788899999999999999999
Q ss_pred HHHhCCCCCCCCcC
Q 048100 146 ILLGADPAFPYSAN 159 (161)
Q Consensus 146 ~Ll~~~~~~~~~~~ 159 (161)
+|++.|++++.++.
T Consensus 190 ~Ll~~ga~~~~~~~ 203 (231)
T 3aji_A 190 FLVTQGASIYIENK 203 (231)
T ss_dssp HHHHTTCCSCCCCT
T ss_pred HHHHCCCCCCCCCC
Confidence 99988888876543
No 11
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.96 E-value=1.2e-27 Score=167.02 Aligned_cols=143 Identities=19% Similarity=0.151 Sum_probs=102.1
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcH
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSP 81 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 81 (161)
.||||.|+..|+.+.++.|++.+..++..|..|.||||+|+ ..| ..+++++|++.|++ ++..+..|.||
T Consensus 4 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~---~~g-------~~~~v~~Ll~~g~~-~~~~~~~g~t~ 72 (261)
T 2xai_A 4 WSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEAC---LGG-------HLSCVKILLKHGAQ-VNGVTADWHTP 72 (261)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHH---HHT-------CHHHHHHHHHTTCC-TTCCCTTSCCH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHH---HcC-------CHHHHHHHHHCCCC-CCCCCCCCCCH
Confidence 47888888888888888888888888888888888888854 344 37788888888776 46667788888
Q ss_pred HHHHHHhCCHHHHHHHHHhhhcCCch---------hhhcCchhHHHHHh------hccCCCCCcHhHHHHHcCCHHHHHH
Q 048100 82 LHVAARYGHAAVVGALIEFAEKQPGQ---------ELESGVKSTTRYML------GMKNDEEDTALHEAVQSGSLDVVEI 146 (161)
Q Consensus 82 l~~a~~~~~~~~~~~Ll~~g~~~~~~---------~~~~~~~~~~~~l~------~~~~~~g~t~l~~a~~~~~~~~~~~ 146 (161)
||+|+..|+.+++++|++.|++.... +...|+.+++++++ +.+|..|.||||+|+..|+.+++++
T Consensus 73 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 152 (261)
T 2xai_A 73 LFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKK 152 (261)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSSCSCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHH
Confidence 88888888888888888887765433 34455555666664 2355556666666666666666666
Q ss_pred HHhCCCCCC
Q 048100 147 LLGADPAFP 155 (161)
Q Consensus 147 Ll~~~~~~~ 155 (161)
|++.|++++
T Consensus 153 Ll~~g~~~~ 161 (261)
T 2xai_A 153 LLESGADVN 161 (261)
T ss_dssp HHHHTCCTT
T ss_pred HHHcCCCCC
Confidence 666555554
No 12
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.96 E-value=9.2e-28 Score=166.90 Aligned_cols=148 Identities=18% Similarity=0.193 Sum_probs=129.0
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcH
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSP 81 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 81 (161)
.||||.|+..|+.+.++.|++.+..++..+..|.||||+|+ ..+ ..+++++|++.++..++..+..|.||
T Consensus 58 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~---~~~-------~~~~v~~Ll~~~~~~~~~~~~~g~t~ 127 (253)
T 1yyh_A 58 ETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAV---SAD-------AQGVFQILIRNRATDLDARMHDGTTP 127 (253)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH---HHT-------CHHHHHHHHHSTTSCTTCCCTTCCCH
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH---HcC-------CHHHHHHHHHcCCCCccccCCCCCcH
Confidence 48999999999999999999999999999999999999955 444 48899999998875567888999999
Q ss_pred HHHHHHhCCHHHHHHHHHhhhcCCch----------hhhcCchhHHHHHh------hccCCCCCcHhHHHHHcCCHHHHH
Q 048100 82 LHVAARYGHAAVVGALIEFAEKQPGQ----------ELESGVKSTTRYML------GMKNDEEDTALHEAVQSGSLDVVE 145 (161)
Q Consensus 82 l~~a~~~~~~~~~~~Ll~~g~~~~~~----------~~~~~~~~~~~~l~------~~~~~~g~t~l~~a~~~~~~~~~~ 145 (161)
||+|+..++.+++++|++.|++.+.. +...|+.+++++|+ +.+|..|.||||+|+..|+.++++
T Consensus 128 L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~ 207 (253)
T 1yyh_A 128 LILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAK 207 (253)
T ss_dssp HHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHH
Confidence 99999999999999999999886655 45666777888886 467889999999999999999999
Q ss_pred HHHhCCCCCCCCcC
Q 048100 146 ILLGADPAFPYSAN 159 (161)
Q Consensus 146 ~Ll~~~~~~~~~~~ 159 (161)
+|+++|++++.++.
T Consensus 208 ~Ll~~ga~~~~~d~ 221 (253)
T 1yyh_A 208 VLLDHFANRDITDH 221 (253)
T ss_dssp HHHHTTCCTTCCCT
T ss_pred HHHHcCCCcccccc
Confidence 99999999886654
No 13
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=1e-27 Score=160.18 Aligned_cols=129 Identities=17% Similarity=0.154 Sum_probs=109.9
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcH
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSP 81 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 81 (161)
.||||.|+..|+.+.+++|++.+..++..+..|.||||+| +..+ ..+++++|++.+++ ++..+..|.||
T Consensus 36 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A---~~~~-------~~~~v~~Ll~~g~~-~~~~~~~g~t~ 104 (192)
T 2rfm_A 36 RTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWA---VKNN-------RLGIAEKLLSKGSN-VNTKDFSGKTP 104 (192)
T ss_dssp CCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHH---HHTT-------CHHHHHHHHHHTCC-TTCCCTTSCCH
T ss_pred CCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHH---HHcC-------CHHHHHHHHHCCCC-CCCCCCCCCcH
Confidence 5899999999999999999999999999999999999995 4444 48999999999987 57779999999
Q ss_pred HHHHHHhCCHHHHHHHHHhhhcCCchhhhcCchhHHHHHhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCCCCCCCc
Q 048100 82 LHVAARYGHAAVVGALIEFAEKQPGQELESGVKSTTRYMLGMKNDEEDTALHEAVQSGSLDVVEILLGADPAFPYSA 158 (161)
Q Consensus 82 l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~l~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~ 158 (161)
||+|+..++.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++|++++.++
T Consensus 105 L~~A~~~~~~~~v~~Ll~~g~~-----------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~ 164 (192)
T 2rfm_A 105 LMWSIIFGYSEMSYFLLEHGAN-----------------VNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARD 164 (192)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCC-----------------SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBC
T ss_pred HHHHHHcCCHHHHHHHHHCCCC-----------------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcC
Confidence 9999999999999999999988 55567777777777777777777777777777766543
No 14
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=1.9e-27 Score=153.69 Aligned_cols=129 Identities=25% Similarity=0.235 Sum_probs=115.2
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcH
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSP 81 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 81 (161)
.++|+.|++.|+.+.+++|++.+...+ .+..|.||||+|+ ..| ..+++++|++.+.+ ++..+..|+||
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~---~~~-------~~~~v~~Ll~~g~~-~~~~~~~g~t~ 70 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAA---QYG-------HFSTTEVLLRAGVS-RDARTKVDRTP 70 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHH---HHT-------CHHHHHHHHTTTCC-TTCCCTTCCCH
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHH---HcC-------CHHHHHHHHHcCCC-CCCCCCCCCCH
Confidence 589999999999999999999887665 6888999999954 444 48999999999987 57779999999
Q ss_pred HHHHHHhCCHHHHHHHHHhhhcCCchhhhcCchhHHHHHhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCCCCCCCcC
Q 048100 82 LHVAARYGHAAVVGALIEFAEKQPGQELESGVKSTTRYMLGMKNDEEDTALHEAVQSGSLDVVEILLGADPAFPYSAN 159 (161)
Q Consensus 82 l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~l~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 159 (161)
||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++|++++.++.
T Consensus 71 L~~A~~~~~~~~v~~Ll~~g~~-----------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 131 (153)
T 1awc_B 71 LHMAASEGHANIVEVLLKHGAD-----------------VNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSK 131 (153)
T ss_dssp HHHHHHHTCHHHHHHHHTTTCC-----------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHHcChHHHHHHHHHcCCC-----------------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCC
Confidence 9999999999999999999988 777899999999999999999999999999999876653
No 15
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.95 E-value=5.2e-27 Score=159.87 Aligned_cols=148 Identities=18% Similarity=0.193 Sum_probs=124.6
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcH
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSP 81 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 81 (161)
.||||.|+..|+.+.+++|++.+..++..+..|.||||+|+ ..+ ..+++++|++.++..++..+..|.||
T Consensus 26 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~---~~~-------~~~~v~~Ll~~~~~~~~~~~~~g~t~ 95 (223)
T 2f8y_A 26 ETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAV---SAD-------AQGVFQILIRNRATDLDARMHDGTTP 95 (223)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH---HTT-------CHHHHHHHHHBTTSCTTCCCTTCCCH
T ss_pred CchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH---HcC-------CHHHHHHHHHcCCCCcccCCCCCCcH
Confidence 47999999999999999999999999999999999999954 444 48899999998875567778899999
Q ss_pred HHHHHHhCCHHHHHHHHHhhhcCCch----------hhhcCchhHHHHHh------hccCCCCCcHhHHHHHcCCHHHHH
Q 048100 82 LHVAARYGHAAVVGALIEFAEKQPGQ----------ELESGVKSTTRYML------GMKNDEEDTALHEAVQSGSLDVVE 145 (161)
Q Consensus 82 l~~a~~~~~~~~~~~Ll~~g~~~~~~----------~~~~~~~~~~~~l~------~~~~~~g~t~l~~a~~~~~~~~~~ 145 (161)
||+|+..++.+++++|++.|++.... +...|+.+++++|+ +.+|..|.||||+|+..|+.++++
T Consensus 96 L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 175 (223)
T 2f8y_A 96 LILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAK 175 (223)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHH
T ss_pred HHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHH
Confidence 99999999999999999988876544 35666777888886 467788999999999999999999
Q ss_pred HHHhCCCCCCCCcC
Q 048100 146 ILLGADPAFPYSAN 159 (161)
Q Consensus 146 ~Ll~~~~~~~~~~~ 159 (161)
+|+++|++++.++.
T Consensus 176 ~Ll~~ga~~~~~~~ 189 (223)
T 2f8y_A 176 VLLDHFANRDITDH 189 (223)
T ss_dssp HHHHTTCCTTCCCT
T ss_pred HHHHcCCCCccccc
Confidence 99999888876543
No 16
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.95 E-value=2e-27 Score=155.23 Aligned_cols=130 Identities=23% Similarity=0.306 Sum_probs=115.0
Q ss_pred ChHHHHHHHcCChHHHHHHHh-hhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCc
Q 048100 2 NSDLYEAAAKGVIEPFNQLAI-DRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDS 80 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~-~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t 80 (161)
+++|+.|++.|+++.++.|++ .+...+..+..|.||||+| +..+ +.+++++|++.+++ ++..+..|+|
T Consensus 9 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A---~~~~-------~~~~v~~Ll~~g~~-~~~~~~~g~t 77 (165)
T 3twr_A 9 DRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFA---AGYN-------RVSVVEYLLQHGAD-VHAKDKGGLV 77 (165)
T ss_dssp HHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHH---HHTT-------CHHHHHHHHHTTCC-TTCCCTTSCC
T ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHH---HHcC-------hHHHHHHHHhcCCC-CCccCCCCCC
Confidence 479999999999999999987 4456677888899999994 4555 48999999999987 5778999999
Q ss_pred HHHHHHHhCCHHHHHHHHHhhhcCCchhhhcCchhHHHHHhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCCCCCCCcC
Q 048100 81 PLHVAARYGHAAVVGALIEFAEKQPGQELESGVKSTTRYMLGMKNDEEDTALHEAVQSGSLDVVEILLGADPAFPYSAN 159 (161)
Q Consensus 81 ~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~l~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 159 (161)
|||+|+..++.+++++|++.|++ ++.+|..|+||||+|+..|+.+++++|+++|++++.++.
T Consensus 78 ~L~~A~~~~~~~~v~~Ll~~g~~-----------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 139 (165)
T 3twr_A 78 PLHNACSYGHYEVAELLVKHGAV-----------------VNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNR 139 (165)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCC-----------------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHHHcCcHHHHHHHHhCCCC-----------------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCC
Confidence 99999999999999999999998 777899999999999999999999999999999876654
No 17
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.95 E-value=2.2e-27 Score=155.99 Aligned_cols=141 Identities=16% Similarity=0.096 Sum_probs=103.7
Q ss_pred hHHHHHHHcCChHHHHHHHhhhCc-cccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcH
Q 048100 3 SDLYEAAAKGVIEPFNQLAIDRQL-GSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSP 81 (161)
Q Consensus 3 ~~l~~A~~~g~~~~v~~ll~~~~~-~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 81 (161)
+|||.|+..|+++.++.|++.+.. .+..+..|.||||+| +..+ ..+++++|++.|++ ++..+..|.||
T Consensus 4 ~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A---~~~~-------~~~~v~~Ll~~g~~-~~~~~~~g~t~ 72 (172)
T 3v30_A 4 LSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWA---SAFG-------EIETVRFLLEWGAD-PHILAKERESA 72 (172)
T ss_dssp CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHH---HHTT-------CHHHHHHHHHHTCC-TTCCCTTCCCH
T ss_pred hhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHH---HHcC-------CHHHHHHHHHcCCC-chhhcccCCCH
Confidence 689999999999999999987765 677888999999994 4455 48899999999887 56778899999
Q ss_pred HHHHHHhCCHHHHHHHHHhhhcCCch----------hhhcCchhHHHHHh------hccCCCCCcHhHHHHHcCCHHHHH
Q 048100 82 LHVAARYGHAAVVGALIEFAEKQPGQ----------ELESGVKSTTRYML------GMKNDEEDTALHEAVQSGSLDVVE 145 (161)
Q Consensus 82 l~~a~~~~~~~~~~~Ll~~g~~~~~~----------~~~~~~~~~~~~l~------~~~~~~g~t~l~~a~~~~~~~~~~ 145 (161)
||+|+..++.+++++|+++|++.... +...|+.+++++|+ +.+|..|.||||+|+..|+.++++
T Consensus 73 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~ 152 (172)
T 3v30_A 73 LSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQ 152 (172)
T ss_dssp HHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHH
Confidence 99999999999999999998884332 23344444455543 345555666666666666666666
Q ss_pred HHHhCCCCC
Q 048100 146 ILLGADPAF 154 (161)
Q Consensus 146 ~Ll~~~~~~ 154 (161)
+|+++++++
T Consensus 153 ~L~~~~~~~ 161 (172)
T 3v30_A 153 VIENHILKL 161 (172)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666555443
No 18
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.95 E-value=2.2e-27 Score=166.62 Aligned_cols=148 Identities=20% Similarity=0.173 Sum_probs=114.5
Q ss_pred hHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCcc-------------
Q 048100 3 SDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPS------------- 69 (161)
Q Consensus 3 ~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~------------- 69 (161)
||||.|+..|+.+.++.|++.+..++..+..|.||||+ |+..+ ..+++++|++.++.
T Consensus 47 t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~---A~~~~-------~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 116 (282)
T 1oy3_D 47 TALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHL---ACRVR-------AHTCACVLLQPRPSHPRDASDTYLTQS 116 (282)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHH---HTTTT-------CHHHHHHHSSSCCSSCCCC--------
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHH---HHHcC-------CcchhHhhhccCCCCchhhHHHHhhcc
Confidence 66677777777777776666666666666667777777 33333 47888888886643
Q ss_pred ---------------------------------chhccCCCCCcHHHHHHHhCCHHHHHHHHHhhhcCCch---------
Q 048100 70 ---------------------------------LLLQVNAKGDSPLHVAARYGHAAVVGALIEFAEKQPGQ--------- 107 (161)
Q Consensus 70 ---------------------------------~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~--------- 107 (161)
.++..+..|.||||+|+..|+.+++++|+++|++....
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL 196 (282)
T 1oy3_D 117 QDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPL 196 (282)
T ss_dssp ---------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHH
T ss_pred cccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHH
Confidence 13456788999999999999999999999999887654
Q ss_pred --hhhcCchhHHHHHh------hccCCCCCcHhHHHHHcCCHHHHHHHHhCCCCCCCCcCC
Q 048100 108 --ELESGVKSTTRYML------GMKNDEEDTALHEAVQSGSLDVVEILLGADPAFPYSANG 160 (161)
Q Consensus 108 --~~~~~~~~~~~~l~------~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~ 160 (161)
+...|+.+++++|+ +.+|..|+||||+|+..|+.+++++|+++|++++.+++.
T Consensus 197 ~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~ 257 (282)
T 1oy3_D 197 HLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGD 257 (282)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC--
T ss_pred HHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCc
Confidence 34566667888886 578899999999999999999999999999999876653
No 19
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=4e-27 Score=155.81 Aligned_cols=127 Identities=20% Similarity=0.245 Sum_probs=97.3
Q ss_pred ChHHHHHHHcCChHHHHHHHhh-hCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCc
Q 048100 2 NSDLYEAAAKGVIEPFNQLAID-RQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDS 80 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~-~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t 80 (161)
-++|+.|+..|+++.++.|++. +...+..+..|.||||+| +..+ ..+++++|++.|++ ++..+..|.|
T Consensus 6 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A---~~~~-------~~~~v~~Ll~~g~~-~~~~~~~g~t 74 (179)
T 3f6q_A 6 MDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWA---CREG-------RSAVVEMLIMRGAR-INVMNRGDDT 74 (179)
T ss_dssp -CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHH---HHTT-------CHHHHHHHHHTTCC-TTCCCTTCCC
T ss_pred HHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHH---HHcC-------cHHHHHHHHHcCCC-CCCcCCCCCC
Confidence 3689999999999999999877 566788899999999994 4454 48899999999887 5777889999
Q ss_pred HHHHHHHhCCHHHHHHHHHhhhcCCchhhhcCchhHHHHHhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCCCCCC
Q 048100 81 PLHVAARYGHAAVVGALIEFAEKQPGQELESGVKSTTRYMLGMKNDEEDTALHEAVQSGSLDVVEILLGADPAFPY 156 (161)
Q Consensus 81 ~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~l~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~ 156 (161)
|||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|+++|++++.
T Consensus 75 ~L~~A~~~~~~~~v~~Ll~~g~~-----------------~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 133 (179)
T 3f6q_A 75 PLHLAASHGHRDIVQKLLQYKAD-----------------INAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSI 133 (179)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCC-----------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSB
T ss_pred HHHHHHHcCCHHHHHHHHHcCCC-----------------CCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcch
Confidence 99999999999999999999988 444455555555555555555555555555555443
No 20
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.95 E-value=9.4e-27 Score=164.94 Aligned_cols=147 Identities=18% Similarity=0.192 Sum_probs=119.7
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcH
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSP 81 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 81 (161)
+|+|+.|+..|+++.|+.|++.+..++..+..|.||||+| +..| +.+++++|++.|++ ++..+..|+||
T Consensus 41 ~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A---~~~g-------~~~~v~~Ll~~ga~-~~~~~~~g~tp 109 (299)
T 1s70_B 41 GAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQA---CIDD-------NVDMVKFLVENGAN-INQPDNEGWIP 109 (299)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHH---HHTT-------CHHHHHHHHHTTCC-TTCCCTTSCCH
T ss_pred ccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHH---HHcC-------CHHHHHHHHHCCCC-CCCCCCCCCcH
Confidence 3789999999999999999999999999999999999995 4555 48999999999987 57779999999
Q ss_pred HHHHHHhCCHHHHHHHHHhhhcCCch------------------------------------------------------
Q 048100 82 LHVAARYGHAAVVGALIEFAEKQPGQ------------------------------------------------------ 107 (161)
Q Consensus 82 l~~a~~~~~~~~~~~Ll~~g~~~~~~------------------------------------------------------ 107 (161)
||+|+..|+.+++++|+++|++....
T Consensus 110 L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 189 (299)
T 1s70_B 110 LHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGH 189 (299)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccC
Confidence 99999999999999999998876433
Q ss_pred ----------------hhhcCchhHHHHHh------hccCCCCCcHhHHHHHcCCHHHHHHHHhCCCCCCCCcC
Q 048100 108 ----------------ELESGVKSTTRYML------GMKNDEEDTALHEAVQSGSLDVVEILLGADPAFPYSAN 159 (161)
Q Consensus 108 ----------------~~~~~~~~~~~~l~------~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 159 (161)
+...|+.+++++|+ +.+|..|+||||+|+..|+.+++++|+++|++++.++.
T Consensus 190 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~ 263 (299)
T 1s70_B 190 INDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNK 263 (299)
T ss_dssp CCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred cchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCC
Confidence 11233344566665 45677788888888888888888888888887765543
No 21
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.95 E-value=6.1e-27 Score=164.37 Aligned_cols=147 Identities=18% Similarity=0.137 Sum_probs=122.3
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCc---cccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCC
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQL---GSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKG 78 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~---~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~ 78 (161)
.||||.|++.|+.+.|++|++.+.. .+..+..|.||||+|+ ..| +.+++++|+++|++ ++..+..|
T Consensus 10 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~---~~g-------~~~~v~~Ll~~ga~-~~~~~~~g 78 (282)
T 1oy3_D 10 DTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAA---ILG-------EASTVEKLYAAGAG-VLVAERGG 78 (282)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHH---HHT-------CHHHHHHHHHTTCC-SSCCCTTS
T ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHH---HcC-------CHHHHHHHHHcCCC-CCCCCCCC
Confidence 5899999999999999999988876 7788999999999954 444 48999999999988 57779999
Q ss_pred CcHHHHHHHhCCHHHHHHHHHhhhcCC-----------------------------------------------ch----
Q 048100 79 DSPLHVAARYGHAAVVGALIEFAEKQP-----------------------------------------------GQ---- 107 (161)
Q Consensus 79 ~t~l~~a~~~~~~~~~~~Ll~~g~~~~-----------------------------------------------~~---- 107 (161)
.||||+|+..|+.+++++|++.|.... ..
T Consensus 79 ~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 158 (282)
T 1oy3_D 79 HTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDG 158 (282)
T ss_dssp CCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTS
T ss_pred CCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCC
Confidence 999999999999999999999875421 11
Q ss_pred ------hhhcCchhHHHHHhh------ccC-CCCCcHhHHHHHcCCHHHHHHHHhCCCCCCCCcC
Q 048100 108 ------ELESGVKSTTRYMLG------MKN-DEEDTALHEAVQSGSLDVVEILLGADPAFPYSAN 159 (161)
Q Consensus 108 ------~~~~~~~~~~~~l~~------~~~-~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 159 (161)
+...|+.+++++|++ ..+ ..|+||||+|+..|+.+++++|+++|++++.++.
T Consensus 159 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~ 223 (282)
T 1oy3_D 159 HTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMY 223 (282)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred cCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccc
Confidence 345566678888863 344 3499999999999999999999999998887654
No 22
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.95 E-value=1.2e-26 Score=158.94 Aligned_cols=144 Identities=17% Similarity=0.192 Sum_probs=116.5
Q ss_pred ChHHHHHHHcCChHHHHHHHhh-hCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccch----hccCC
Q 048100 2 NSDLYEAAAKGVIEPFNQLAID-RQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLL----LQVNA 76 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~-~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~----~~~~~ 76 (161)
+||||.|++.|+.+.++.|++. +..++.+|..|.||||+| +..| +.+++++|++.+++.. ...+.
T Consensus 4 ~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A---~~~g-------~~~~v~~Ll~~~~~~~~~~~~~~~~ 73 (232)
T 2rfa_A 4 ESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIA---ALYD-------NLEAAMVLMEAAPELVFEPMTSELY 73 (232)
T ss_dssp TCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHH---HHTT-------CHHHHHHHHHHCGGGGGCCCCSTTT
T ss_pred CCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHH---HHcC-------CHHHHHHHHHcCchhccccccccCC
Confidence 6899999999999999999987 889999999999999994 4555 4899999999998743 34577
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHhhhcCCch-----------------------hhhcCchhHHHHHh------hccCCC
Q 048100 77 KGDSPLHVAARYGHAAVVGALIEFAEKQPGQ-----------------------ELESGVKSTTRYML------GMKNDE 127 (161)
Q Consensus 77 ~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~-----------------------~~~~~~~~~~~~l~------~~~~~~ 127 (161)
.|.||||+|+..|+.+++++|++.|++.... +...|+.+++++|+ +.+|..
T Consensus 74 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~ 153 (232)
T 2rfa_A 74 EGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSL 153 (232)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT
T ss_pred CCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC
Confidence 8999999999999999999999999886543 23445555666665 346777
Q ss_pred CCcHhHHHHHcCCHHHH----HHHHhCCCCCC
Q 048100 128 EDTALHEAVQSGSLDVV----EILLGADPAFP 155 (161)
Q Consensus 128 g~t~l~~a~~~~~~~~~----~~Ll~~~~~~~ 155 (161)
|+||||+|+..++.+++ ++|+++|++..
T Consensus 154 g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~ 185 (232)
T 2rfa_A 154 GNTVLHILILQPNKTFACQMYNLLLSYDGGDH 185 (232)
T ss_dssp SCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCS
T ss_pred CCCHHHHHHHcCChHHHHHHHHHHHhcCCchh
Confidence 77777777777777776 77777777654
No 23
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.95 E-value=1.9e-26 Score=163.05 Aligned_cols=143 Identities=19% Similarity=0.153 Sum_probs=101.2
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcH
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSP 81 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 81 (161)
.||||.|+..|+.+.+++|++.+..++.+|..|.||||+| +..| ..+++++|++.+++ ++..+..|.||
T Consensus 60 ~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A---~~~g-------~~~~v~~Ll~~ga~-~~~~~~~g~t~ 128 (285)
T 3d9h_A 60 WSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEA---CLGG-------HLSCVKILLKHGAQ-VNGVTADWHTP 128 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHH---HHTT-------CHHHHHHHHHTTCC-SSCCCTTCCCH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHH---HHCC-------cHHHHHHHHHCCCC-CCCCCCCCCCH
Confidence 4788888888888888888888888888888888888884 4444 37788888887766 46667778888
Q ss_pred HHHHHHhCCHHHHHHHHHhhhcCCch---------hhhcCchhHHHHHh------hccCCCCCcHhHHHHHcCCHHHHHH
Q 048100 82 LHVAARYGHAAVVGALIEFAEKQPGQ---------ELESGVKSTTRYML------GMKNDEEDTALHEAVQSGSLDVVEI 146 (161)
Q Consensus 82 l~~a~~~~~~~~~~~Ll~~g~~~~~~---------~~~~~~~~~~~~l~------~~~~~~g~t~l~~a~~~~~~~~~~~ 146 (161)
||+|+..|+.+++++|++.|++.... +...|+.+++++|+ +.+|..|+||||+|+..|+.+++++
T Consensus 129 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~ 208 (285)
T 3d9h_A 129 LFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKK 208 (285)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSSCSCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHH
T ss_pred HHHHHHcCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHH
Confidence 88888888888888888877665432 34455555666664 3455566666666666666666666
Q ss_pred HHhCCCCCC
Q 048100 147 LLGADPAFP 155 (161)
Q Consensus 147 Ll~~~~~~~ 155 (161)
|++.|++++
T Consensus 209 Ll~~ga~~~ 217 (285)
T 3d9h_A 209 LLESGADVN 217 (285)
T ss_dssp HHHTTCCTT
T ss_pred HHHCCCCCC
Confidence 666666654
No 24
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.95 E-value=2.4e-27 Score=155.83 Aligned_cols=119 Identities=22% Similarity=0.175 Sum_probs=96.9
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcH
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSP 81 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 81 (161)
.||||.|+..|+.+.+++|++.+..++..+..|.||||+| +..+ ..+++++|++.+++ ++..+..|.||
T Consensus 37 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A---~~~~-------~~~~v~~Ll~~g~~-~~~~~~~g~t~ 105 (172)
T 3v30_A 37 FTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLA---STGG-------YTDIVGLLLERDVD-INIYDWNGGTP 105 (172)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHH---HHTT-------CHHHHHHHHTTTCC-TTCCCTTSCCH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHH---HHCC-------CHHHHHHHHHcCCC-CCCCCCCCCCH
Confidence 4899999999999999999999999999999999999994 4555 48999999999988 57789999999
Q ss_pred HHHHHHhCCHHHHHHHHHhhhcCCch----------hhhcCchhHHHHHhh------ccCCCCCcH
Q 048100 82 LHVAARYGHAAVVGALIEFAEKQPGQ----------ELESGVKSTTRYMLG------MKNDEEDTA 131 (161)
Q Consensus 82 l~~a~~~~~~~~~~~Ll~~g~~~~~~----------~~~~~~~~~~~~l~~------~~~~~g~t~ 131 (161)
||+|+..++.+++++|++.|++.... +...|+.+++++|++ .++..|.||
T Consensus 106 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 106 LLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVPADP 171 (172)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHSCC-------
T ss_pred HHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHhcccCCCCCC
Confidence 99999999999999999999887655 355666677877763 455555555
No 25
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.95 E-value=2.5e-26 Score=157.79 Aligned_cols=146 Identities=21% Similarity=0.208 Sum_probs=91.3
Q ss_pred hHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcHH
Q 048100 3 SDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSPL 82 (161)
Q Consensus 3 ~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l 82 (161)
||||.|+..|+.+.+++|++.+...+..+..|.||||+| +..+ ..+++++|++.++..++..+..|.|||
T Consensus 46 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A---~~~~-------~~~~~~~Ll~~~~~~~~~~~~~g~t~L 115 (237)
T 3b7b_A 46 TPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLA---AKKG-------HYEVVQYLLSNGQMDVNCQDDGGWTPM 115 (237)
T ss_dssp CHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHH---HHTT-------CHHHHHHHHTTTCCCTTCCCTTSCCHH
T ss_pred CHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHH---HHcC-------CHHHHHHHHhCCCCCcccCCCCCCCHH
Confidence 445555555555555555544444444455555555552 2222 366677777766433555666677777
Q ss_pred HHHHHhCCHHHHHHHHHhhhcCCch----------hhhcCchhHHHHHh------hccCCCCCcHhHHHHHcCCHHHHHH
Q 048100 83 HVAARYGHAAVVGALIEFAEKQPGQ----------ELESGVKSTTRYML------GMKNDEEDTALHEAVQSGSLDVVEI 146 (161)
Q Consensus 83 ~~a~~~~~~~~~~~Ll~~g~~~~~~----------~~~~~~~~~~~~l~------~~~~~~g~t~l~~a~~~~~~~~~~~ 146 (161)
|+|+..++.+++++|++.|++.... +...|..+++++|+ +.+|..|.||||+|+..++.+++++
T Consensus 116 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 195 (237)
T 3b7b_A 116 IWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVL 195 (237)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHH
Confidence 7777777777777777776665433 34555666677775 3566778888888888888888888
Q ss_pred HHhCCCCCCCCc
Q 048100 147 LLGADPAFPYSA 158 (161)
Q Consensus 147 Ll~~~~~~~~~~ 158 (161)
|+++|++++.++
T Consensus 196 Ll~~gad~~~~d 207 (237)
T 3b7b_A 196 FLSRDSDVTLKN 207 (237)
T ss_dssp HHTTTCCTTCCC
T ss_pred HHHcCCCCCccC
Confidence 888888776654
No 26
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.95 E-value=2.2e-26 Score=160.70 Aligned_cols=146 Identities=21% Similarity=0.229 Sum_probs=127.4
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcH
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSP 81 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 81 (161)
.||||.|+..|+.+.++.|++.+..++..|..|.||||+|+ ..| ..+++++|++.|+++ + .+..|.||
T Consensus 37 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~---~~~-------~~~~v~~Ll~~g~~~-~-~~~~g~t~ 104 (261)
T 2xai_A 37 VSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNAC---VSG-------SWDCVNLLLQHGASV-Q-PESDLASP 104 (261)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH---HHT-------CHHHHHHHHHTTCCS-S-CSCTTCCH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH---HcC-------CHHHHHHHHHCCCCC-C-CCCCCCCH
Confidence 58999999999999999999999999999999999999954 444 489999999999874 3 35669999
Q ss_pred HHHHHHhCCHHHHHHHHHhhhcCCch----------hhhcCchhHHHHHhhc-----cCCCCCcHhHHHHHcCCHHHHHH
Q 048100 82 LHVAARYGHAAVVGALIEFAEKQPGQ----------ELESGVKSTTRYMLGM-----KNDEEDTALHEAVQSGSLDVVEI 146 (161)
Q Consensus 82 l~~a~~~~~~~~~~~Ll~~g~~~~~~----------~~~~~~~~~~~~l~~~-----~~~~g~t~l~~a~~~~~~~~~~~ 146 (161)
||+|+..|+.+++++|++.|++.+.. +...|+.+++++|++. .+..|+||||+|+..++.+++++
T Consensus 105 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~Lh~A~~~~~~~~v~~ 184 (261)
T 2xai_A 105 IHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVARTASEELACL 184 (261)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTCCBTTBCHHHHHHHHTCHHHHHH
T ss_pred HHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHcCCHHHHHH
Confidence 99999999999999999999887654 4566777888888742 47889999999999999999999
Q ss_pred HHhCCCCCCCCcC
Q 048100 147 LLGADPAFPYSAN 159 (161)
Q Consensus 147 Ll~~~~~~~~~~~ 159 (161)
|+++|++++.++.
T Consensus 185 Ll~~gad~~~~d~ 197 (261)
T 2xai_A 185 LMDFGADTQAKNA 197 (261)
T ss_dssp HHHTTCCTTCCCT
T ss_pred HHHcCCCCCCcCC
Confidence 9999999987654
No 27
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=4.9e-27 Score=155.35 Aligned_cols=130 Identities=17% Similarity=0.144 Sum_probs=119.9
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcH
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSP 81 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 81 (161)
.||||.|+..|+.+.++.|++.+..++..+..|.||||+| +..+ ..+++++|++.|++ ++..+..|.||
T Consensus 40 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A---~~~~-------~~~~v~~Ll~~g~~-~~~~d~~g~t~ 108 (179)
T 3f6q_A 40 FSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLA---ASHG-------HRDIVQKLLQYKAD-INAVNEHGNVP 108 (179)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH---HHTT-------CHHHHHHHHHTTCC-TTCCCTTSCCH
T ss_pred CCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHH---HHcC-------CHHHHHHHHHcCCC-CCccCCCCCCH
Confidence 4899999999999999999999999999999999999995 4555 48999999999987 57789999999
Q ss_pred HHHHHHhCCHHHHHHHHHhhhcCCchhhhcCchhHHHHHhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCCCCCCCcC
Q 048100 82 LHVAARYGHAAVVGALIEFAEKQPGQELESGVKSTTRYMLGMKNDEEDTALHEAVQSGSLDVVEILLGADPAFPYSAN 159 (161)
Q Consensus 82 l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~l~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 159 (161)
||+|+..++.+++++|+++|++ ++.+|..|.||+++|+..++.+++++|++.|++++....
T Consensus 109 L~~A~~~~~~~~v~~Ll~~ga~-----------------~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~~~~~ 169 (179)
T 3f6q_A 109 LHYACFWGQDQVAEDLVANGAL-----------------VSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNRIPY 169 (179)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC-----------------SSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCSCBCC
T ss_pred HHHHHHcCCHHHHHHHHHCCCC-----------------cchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCcccCCc
Confidence 9999999999999999999998 778899999999999999999999999999999986543
No 28
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.95 E-value=1.7e-26 Score=151.49 Aligned_cols=122 Identities=24% Similarity=0.314 Sum_probs=112.4
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcH
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSP 81 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 81 (161)
.|+||.|+..|+.+.+++|++.+...+..+..|.||||+| +..+ ..+++++|++.+++ ++..+..|.||
T Consensus 48 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A---~~~~-------~~~~~~~Ll~~g~~-~~~~~~~g~t~ 116 (169)
T 2y1l_E 48 WTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLA---ALFG-------HLEIVEVLLKNGAD-VNANDMEGHTP 116 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH---HHTT-------CHHHHHHHHHTTCC-TTCCCTTSCCH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHH---HHcC-------CHHHHHHHHHcCCC-CCCCCCCCCCH
Confidence 5899999999999999999999999999999999999995 4455 48999999999987 57779999999
Q ss_pred HHHHHHhCCHHHHHHHHHhhhcCCchhhhcCchhHHHHHhhccCCCCCcHhHHHHHcCCHHHHHHHHhCC
Q 048100 82 LHVAARYGHAAVVGALIEFAEKQPGQELESGVKSTTRYMLGMKNDEEDTALHEAVQSGSLDVVEILLGAD 151 (161)
Q Consensus 82 l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~l~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~ 151 (161)
||+|+..++.+++++|+++|++ ++.+|..|.||+++|+..|+.+++++|+++|
T Consensus 117 L~~A~~~~~~~~v~~Ll~~g~~-----------------~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 117 LHLAAMFGHLEIVEVLLKNGAD-----------------VNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC-----------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred HHHHHHcCCHHHHHHHHHcCCC-----------------CCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 9999999999999999999998 7788999999999999999999999999876
No 29
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.95 E-value=1.5e-26 Score=149.46 Aligned_cols=118 Identities=22% Similarity=0.227 Sum_probs=109.5
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcH
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSP 81 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 81 (161)
.||||.|+..|+.+.+++|++.+..++..+..|.||||+|+ ..+ ..+++++|++.|++ ++..+..|.||
T Consensus 35 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~---~~~-------~~~~v~~Ll~~g~~-~~~~~~~g~t~ 103 (153)
T 1awc_B 35 TSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAA---SEG-------HANIVEVLLKHGAD-VNAKDMLKMTA 103 (153)
T ss_dssp CCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHH---HHT-------CHHHHHHHHTTTCC-TTCCCTTSCCH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH---HcC-------hHHHHHHHHHcCCC-CCCCCCCCCCH
Confidence 58999999999999999999999999999999999999955 444 48999999999988 57789999999
Q ss_pred HHHHHHhCCHHHHHHHHHhhhcCCchhhhcCchhHHHHHhhccCCCCCcHhHHHHHcCCHHHHHHH
Q 048100 82 LHVAARYGHAAVVGALIEFAEKQPGQELESGVKSTTRYMLGMKNDEEDTALHEAVQSGSLDVVEIL 147 (161)
Q Consensus 82 l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~l~~~~~~~g~t~l~~a~~~~~~~~~~~L 147 (161)
||+|+..++.+++++|+++|++ ++.+|..|.||+++|+..|+.+++++|
T Consensus 104 L~~A~~~~~~~~v~~Ll~~ga~-----------------~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 104 LHWATEHNHQEVVELLIKYGAD-----------------VHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC-----------------TTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCC-----------------ccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 9999999999999999999998 778899999999999999999999987
No 30
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.95 E-value=5.4e-26 Score=156.30 Aligned_cols=146 Identities=18% Similarity=0.164 Sum_probs=77.1
Q ss_pred hHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCcc---chhccCCCCC
Q 048100 3 SDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPS---LLLQVNAKGD 79 (161)
Q Consensus 3 ~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~---~~~~~~~~~~ 79 (161)
||||.|+..|+.+.+++|++.+..++..+..|.||||+| +..+ ..+++++|++.++. .++..+..|.
T Consensus 48 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A---~~~~-------~~~~~~~Ll~~~~~~~~~~~~~~~~g~ 117 (241)
T 1k1a_A 48 TPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLA---CEHR-------SPTCLRALLDSAAPGTLDLEARNYDGL 117 (241)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH---HHTT-------CHHHHHHHHHHSCTTSCCTTCCCTTSC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHH---HHcC-------CHHHHHHHHHcCCCccccccccCcCCC
Confidence 344444444444444444444444444444444444442 2222 24555555555441 1334455555
Q ss_pred cHHHHHHHhCCHHHHHHHHHhhhcCCch-----------hhhcCchhHHHHHh------hccCCCCCcHhHHHHHcCCHH
Q 048100 80 SPLHVAARYGHAAVVGALIEFAEKQPGQ-----------ELESGVKSTTRYML------GMKNDEEDTALHEAVQSGSLD 142 (161)
Q Consensus 80 t~l~~a~~~~~~~~~~~Ll~~g~~~~~~-----------~~~~~~~~~~~~l~------~~~~~~g~t~l~~a~~~~~~~ 142 (161)
||||+|+..++.+++++|++.|.+.... +...|+.+++++|+ +.+|..|+||||+|+..|+.+
T Consensus 118 t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 197 (241)
T 1k1a_A 118 TALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLP 197 (241)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHH
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHH
Confidence 5666666556666666666555554322 23444445566654 345666777777777777777
Q ss_pred HHHHHHhCCCCCCCCc
Q 048100 143 VVEILLGADPAFPYSA 158 (161)
Q Consensus 143 ~~~~Ll~~~~~~~~~~ 158 (161)
++++|+++|++++.++
T Consensus 198 ~v~~Ll~~ga~~~~~~ 213 (241)
T 1k1a_A 198 LVRTLVRSGADSSLKN 213 (241)
T ss_dssp HHHHHHHTTCCTTCCC
T ss_pred HHHHHHhcCCCCCCcC
Confidence 7777777777666544
No 31
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.95 E-value=5.7e-27 Score=168.66 Aligned_cols=150 Identities=17% Similarity=0.138 Sum_probs=117.9
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcH
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSP 81 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 81 (161)
.||||+|+..|+.+.|+.|++.+..++.+|..|.||||+|+ ..|+.. ..++++.|++.+...++..+..|+||
T Consensus 132 ~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~---~~g~~~----~~~~~~~ll~~~~~~~~~~d~~g~tp 204 (327)
T 1sw6_A 132 NTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAV---KSVNNY----DSGTFEALLDYLYPCLILEDSMNRTI 204 (327)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHH---HSSHHH----HTTCHHHHHHHHGGGGGEECTTCCCH
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH---Hhcccc----cHHHHHHHHHhhhccccCCCCCCCCH
Confidence 58999999999999999999999999999999999999954 433200 13567777777644467889999999
Q ss_pred HHHHHH----hCCHHHHHHHHHhhh--------------------cCCchhhhcCchhHHH-----H----HhhccCCCC
Q 048100 82 LHVAAR----YGHAAVVGALIEFAE--------------------KQPGQELESGVKSTTR-----Y----MLGMKNDEE 128 (161)
Q Consensus 82 l~~a~~----~~~~~~~~~Ll~~g~--------------------~~~~~~~~~~~~~~~~-----~----l~~~~~~~g 128 (161)
||+|++ .|+.+++++|++.+. ++... ...|..++.. + .++.+|..|
T Consensus 205 Lh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~-~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G 283 (327)
T 1sw6_A 205 LHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDK-NGERKDSILENLDLKWIIANMLNAQDSNG 283 (327)
T ss_dssp HHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-----------------CHHHHHCSHHHHHHHTTTCCCTTS
T ss_pred HHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccc-cccCCChhHHHHHHHHHHHhCCCCCCCCC
Confidence 999999 899999999999853 33332 4455555432 2 368899999
Q ss_pred CcHhHHHHHcCCHHHHHHHHhCCCCCCCCcC
Q 048100 129 DTALHEAVQSGSLDVVEILLGADPAFPYSAN 159 (161)
Q Consensus 129 ~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 159 (161)
+||||+|+..|+.+++++|+++|++++.++.
T Consensus 284 ~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~ 314 (327)
T 1sw6_A 284 DTCLNIAARLGNISIVDALLDYGADPFIANK 314 (327)
T ss_dssp CCHHHHHHHHCCHHHHHHHHHTTCCTTCCCT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCcccCC
Confidence 9999999999999999999999999987764
No 32
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.94 E-value=5.5e-26 Score=155.19 Aligned_cols=101 Identities=19% Similarity=0.210 Sum_probs=53.5
Q ss_pred HHHHHHHHHhC--ccchhccCCCCCcHHHHHHHhCCHHHHHHHHHhhhcCCch----------hhhcCchhHHHHHhh--
Q 048100 57 TKFVELVLETC--PSLLLQVNAKGDSPLHVAARYGHAAVVGALIEFAEKQPGQ----------ELESGVKSTTRYMLG-- 122 (161)
Q Consensus 57 ~~~v~~Ll~~~--~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~----------~~~~~~~~~~~~l~~-- 122 (161)
.+++++|++.+ ++ ++..+..|.||||+|+..++.+++++|++.|++.... +...|+.+++++|++
T Consensus 85 ~~~~~~Ll~~g~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 163 (228)
T 2dzn_A 85 LEVVKSLYDRPLKPD-LNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLG 163 (228)
T ss_dssp HHHHHHHHSSSSCCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTT
T ss_pred HHHHHHHHhCCCCcc-cccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 44555555544 22 2334455555555555555555555555555444332 234444455555542
Q ss_pred -----ccCCCCCcHhHHHHHcCCHHHHHHHH-hCCCCCCCCc
Q 048100 123 -----MKNDEEDTALHEAVQSGSLDVVEILL-GADPAFPYSA 158 (161)
Q Consensus 123 -----~~~~~g~t~l~~a~~~~~~~~~~~Ll-~~~~~~~~~~ 158 (161)
.+|..|+||||+|+..|+.+++++|+ +.|++++.++
T Consensus 164 ~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~ 205 (228)
T 2dzn_A 164 KSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVD 205 (228)
T ss_dssp CCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBC
T ss_pred cccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccC
Confidence 24556666666666666666666666 5566655443
No 33
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.94 E-value=3.2e-26 Score=153.69 Aligned_cols=147 Identities=20% Similarity=0.252 Sum_probs=117.1
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhC-ccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCc
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQ-LGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDS 80 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~-~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t 80 (161)
.|+|+.|+..|+.+.++.++..+. .++..+..|.||||+|+ ..+ ..+++++|++.|++ ++..+..|.|
T Consensus 6 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~---~~~-------~~~~v~~Ll~~g~~-~~~~~~~g~t 74 (201)
T 3hra_A 6 VGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAV---HNN-------DIEIAKALIDRGAD-INLQNSISDS 74 (201)
T ss_dssp TTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHH---HHT-------CHHHHHHHHHTTCC-TTCCCTTSCC
T ss_pred ccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHH---HcC-------CHHHHHHHHHcCCC-CCCCCCCCCC
Confidence 478999999999999999887665 77888889999999954 444 48899999998887 4677888899
Q ss_pred HHHHHHHhCCHHHHHHHHHhhh-cCCch----------hhhcCchhHHHHHh-------hccCCCCCcHhHHHHHcCC--
Q 048100 81 PLHVAARYGHAAVVGALIEFAE-KQPGQ----------ELESGVKSTTRYML-------GMKNDEEDTALHEAVQSGS-- 140 (161)
Q Consensus 81 ~l~~a~~~~~~~~~~~Ll~~g~-~~~~~----------~~~~~~~~~~~~l~-------~~~~~~g~t~l~~a~~~~~-- 140 (161)
|||+|+..|+.+++++|++.+. +.... +...|+.+++++|+ +.+|..|+||||+|+..+.
T Consensus 75 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~ 154 (201)
T 3hra_A 75 PYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGN 154 (201)
T ss_dssp HHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCS
T ss_pred HHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccch
Confidence 9999999999999999985543 33222 45667777888876 3567889999999999887
Q ss_pred ---HHHHHHHHhCCCCCCCCcC
Q 048100 141 ---LDVVEILLGADPAFPYSAN 159 (161)
Q Consensus 141 ---~~~~~~Ll~~~~~~~~~~~ 159 (161)
.+++++|+++|++++.++.
T Consensus 155 ~~~~~~v~~Ll~~ga~~~~~~~ 176 (201)
T 3hra_A 155 QLYQDIVKLLMENGADQSIKDN 176 (201)
T ss_dssp HHHHHHHHHHHHTTCCTTCCCT
T ss_pred hhHHHHHHHHHHCCCCCCccCC
Confidence 8999999999998886654
No 34
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.94 E-value=1.7e-26 Score=163.33 Aligned_cols=145 Identities=14% Similarity=0.088 Sum_probs=102.8
Q ss_pred hHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCC-CcH
Q 048100 3 SDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKG-DSP 81 (161)
Q Consensus 3 ~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~-~t~ 81 (161)
||||.|+..|+.+.+++|++.+..++..+..|.||||+| +..| +.+++++|+++|++ ++..+..| .||
T Consensus 64 t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A---~~~g-------~~~~v~~Ll~~ga~-~~~~~~~g~~t~ 132 (285)
T 3kea_A 64 FPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYA---VDSG-------NMQTVKLFVKKNWR-LMFYGKTGWKTS 132 (285)
T ss_dssp CHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHH---HHTT-------CHHHHHHHHHHCGG-GGGCSSSGGGSH
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHH---HHcC-------CHHHHHHHHhcCCC-CCccCCCCCCCH
Confidence 667777777777777777777777766777777777773 3333 36777777777766 45556666 577
Q ss_pred HHHHHHhCCHHHHHHHHHhhhcCCch---------hhhcCchhHHHHHh------hccCCCCCcH-hHHHHHcCCHHHHH
Q 048100 82 LHVAARYGHAAVVGALIEFAEKQPGQ---------ELESGVKSTTRYML------GMKNDEEDTA-LHEAVQSGSLDVVE 145 (161)
Q Consensus 82 l~~a~~~~~~~~~~~Ll~~g~~~~~~---------~~~~~~~~~~~~l~------~~~~~~g~t~-l~~a~~~~~~~~~~ 145 (161)
||+|+..|+.+++++|+++|.+.... +...|+.+++++|+ +.+|..|+|| ||+|+..|+.++++
T Consensus 133 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~ 212 (285)
T 3kea_A 133 FYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQ 212 (285)
T ss_dssp HHHHHHTTCHHHHHHHHTTSCTTCCCSTHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHhCCCccccccCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHH
Confidence 77777777777777777776654221 45666667777775 5677788887 88888888888888
Q ss_pred HHHhCCCCCCCCc
Q 048100 146 ILLGADPAFPYSA 158 (161)
Q Consensus 146 ~Ll~~~~~~~~~~ 158 (161)
+|+++|++++..+
T Consensus 213 ~Ll~~gad~~~~~ 225 (285)
T 3kea_A 213 ALFKYDINIYSAN 225 (285)
T ss_dssp HHTTSCBCSTTTT
T ss_pred HHHHcCCCCCCCC
Confidence 8888888877653
No 35
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.94 E-value=1.9e-27 Score=163.37 Aligned_cols=129 Identities=18% Similarity=0.217 Sum_probs=117.0
Q ss_pred hHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcHH
Q 048100 3 SDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSPL 82 (161)
Q Consensus 3 ~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l 82 (161)
|+||.|+..|+.+.++.|++.+.+++..|..|.||||+| +..| ..+++++|++.|++ ++..|..|+|||
T Consensus 23 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A---~~~g-------~~~~v~~Ll~~ga~-~n~~d~~g~tpL 91 (229)
T 2vge_A 23 VLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNA---ICGA-------NYSIVDFLITAGAN-VNSPDSHGWTPL 91 (229)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHH---HHTT-------CHHHHHHHHHTTCC-TTCCCTTCCCHH
T ss_pred HHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHH---HHcC-------CHHHHHHHHHCCCC-CCCCCCCCCCHH
Confidence 689999999999999999999999999999999999995 4455 48999999999987 577899999999
Q ss_pred HHHHHhCCHHHHHHHHHhhhcCCchhhhcCchhHHHHHhhccC-CCCCcHhHHH--HHcCCHHHHHHHHhCCCCCCCCcC
Q 048100 83 HVAARYGHAAVVGALIEFAEKQPGQELESGVKSTTRYMLGMKN-DEEDTALHEA--VQSGSLDVVEILLGADPAFPYSAN 159 (161)
Q Consensus 83 ~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~l~~~~~-~~g~t~l~~a--~~~~~~~~~~~Ll~~~~~~~~~~~ 159 (161)
|+|+..|+.+++++|++.|++ ++.++ ..|+||||+| +..|+.+++++|++.|++++..++
T Consensus 92 h~A~~~g~~~~v~~Ll~~ga~-----------------~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~ 154 (229)
T 2vge_A 92 HCAASCNDTVICMALVQHGAA-----------------IFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNS 154 (229)
T ss_dssp HHHHHTTCHHHHHHHHTTTCC-----------------TTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGG
T ss_pred HHHHHcCCHHHHHHHHHcCCC-----------------cccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccC
Confidence 999999999999999999998 55555 6999999999 999999999999999998876653
No 36
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.94 E-value=1.8e-26 Score=158.72 Aligned_cols=143 Identities=16% Similarity=0.102 Sum_probs=97.7
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCcc-----chhccCC
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPS-----LLLQVNA 76 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~-----~~~~~~~ 76 (161)
.||||.|+..|+.+.+++|++.+..++..+..|.||||+|+ ..+ ..+++++|++.+++ .....+.
T Consensus 46 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~---~~~-------~~~~v~~Ll~~~~~~~~~~~~~~~~~ 115 (236)
T 1ikn_D 46 QTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLAC---EQG-------CLASVGVLTQSCTTPHLHSILKATNY 115 (236)
T ss_dssp CCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHH---HHT-------CHHHHHHHHHSTTTTSSSCGGGCCCT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH---HcC-------CHHHHHHHHhcccchhHHHHhhccCC
Confidence 37888888888888888888877778878888888888844 333 37788888887653 2355677
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHhhhcCCch-----------hhhcCchhHHHHHh------hccCCCCCcHhHHHHHcC
Q 048100 77 KGDSPLHVAARYGHAAVVGALIEFAEKQPGQ-----------ELESGVKSTTRYML------GMKNDEEDTALHEAVQSG 139 (161)
Q Consensus 77 ~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~-----------~~~~~~~~~~~~l~------~~~~~~g~t~l~~a~~~~ 139 (161)
.|.||||+|+..|+.+++++|++.|++.... +...|+.+++++|+ +.+|..|.|||++|+..|
T Consensus 116 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~ 195 (236)
T 1ikn_D 116 NGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRP 195 (236)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSS
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccC
Confidence 7888888888888888888888888775433 23334444555554 345556666666666666
Q ss_pred CHHHHHHHHhCCCCC
Q 048100 140 SLDVVEILLGADPAF 154 (161)
Q Consensus 140 ~~~~~~~Ll~~~~~~ 154 (161)
+.+++++|+++|++.
T Consensus 196 ~~~~~~~Ll~~ga~~ 210 (236)
T 1ikn_D 196 STRIQQQLGQLTLEN 210 (236)
T ss_dssp CHHHHHHHHTTSCGG
T ss_pred chHHHHHHHHcchhh
Confidence 666666666666543
No 37
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.94 E-value=2.1e-26 Score=148.96 Aligned_cols=136 Identities=24% Similarity=0.296 Sum_probs=100.6
Q ss_pred ChHHHHHHHcCChHHHHHHHhh-hCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCc
Q 048100 2 NSDLYEAAAKGVIEPFNQLAID-RQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDS 80 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~-~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t 80 (161)
.++|+.|++.|+.+.++.|++. +..++..+..|.||||+ +. .| ..+++++|++.|++ ++..+..|.|
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~---~~-------~~~~v~~Ll~~g~~-~~~~~~~g~t 70 (156)
T 1bd8_A 3 GDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MM---FG-------STAIALELLKQGAS-PNVQDTSGTS 70 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SC---TT-------CHHHHHHHHHTTCC-TTCCCTTSCC
T ss_pred chHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HH---cC-------CHHHHHHHHHCCCC-CCCcCCCCCC
Confidence 4799999999999999999987 33778899999999999 32 33 48999999999987 5778999999
Q ss_pred HHHHHHHhCCHHHHHHHHHhhhcCCch----------hhhcCchhHHHHHh-----hccCCCCCcHhHHHHHcCCHHHHH
Q 048100 81 PLHVAARYGHAAVVGALIEFAEKQPGQ----------ELESGVKSTTRYML-----GMKNDEEDTALHEAVQSGSLDVVE 145 (161)
Q Consensus 81 ~l~~a~~~~~~~~~~~Ll~~g~~~~~~----------~~~~~~~~~~~~l~-----~~~~~~g~t~l~~a~~~~~~~~~~ 145 (161)
|||+|+..|+.+++++|++.|++.+.. +...|+.+++++|+ +.+|..|.||||+|+..|+.++++
T Consensus 71 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~g~t~l~~A~~~~~~~~v~ 150 (156)
T 1bd8_A 71 PVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAESDLHRRDARGLTPLELALQRGAQDLVD 150 (156)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTTSCTTCCCTTSCCHHHHHHHSCCHHHHH
T ss_pred HHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhccCCCCcCCCCCCHHHHHHHcCcHHHHH
Confidence 999999999999999999999884332 23333344444443 234445555555555555555555
Q ss_pred HHHh
Q 048100 146 ILLG 149 (161)
Q Consensus 146 ~Ll~ 149 (161)
+|++
T Consensus 151 ~Ll~ 154 (156)
T 1bd8_A 151 ILQG 154 (156)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 5543
No 38
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.94 E-value=1.2e-26 Score=151.55 Aligned_cols=122 Identities=19% Similarity=0.142 Sum_probs=110.8
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcH
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSP 81 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 81 (161)
.||||.|+..|+.+.+++|++.+..++..|..|.||||+| +..+ ..+++++|++.+++ ++..+..|+||
T Consensus 43 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A---~~~~-------~~~~v~~Ll~~g~~-~~~~~~~g~t~ 111 (165)
T 3twr_A 43 STPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNA---CSYG-------HYEVAELLVKHGAV-VNVADLWKFTP 111 (165)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH---HHTT-------CHHHHHHHHHTTCC-TTCCCTTCCCH
T ss_pred CCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHH---HHcC-------cHHHHHHHHhCCCC-CCCcCCCCCCH
Confidence 4899999999999999999999999999999999999995 4555 48999999999988 57789999999
Q ss_pred HHHHHHhCCHHHHHHHHHhhhcCCchhhhcCchhHHHHHhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCC
Q 048100 82 LHVAARYGHAAVVGALIEFAEKQPGQELESGVKSTTRYMLGMKNDEEDTALHEAVQSGSLDVVEILLGADP 152 (161)
Q Consensus 82 l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~l~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~ 152 (161)
||+|+..|+.+++++|+++|++ ++.+|..|.||+++|.. ++.+++++|++.|+
T Consensus 112 L~~A~~~~~~~~v~~Ll~~ga~-----------------~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 112 LHEAAAKGKYEICKLLLQHGAD-----------------PTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC-----------------TTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred HHHHHHcCCHHHHHHHHHcCCC-----------------CcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 9999999999999999999998 78889999999999777 99999999998875
No 39
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.94 E-value=9.5e-26 Score=154.36 Aligned_cols=147 Identities=22% Similarity=0.279 Sum_probs=126.8
Q ss_pred ChHHHHHHHcCChHHHHHHHhhh-CccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCc
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDR-QLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDS 80 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~-~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t 80 (161)
+++|+.|+..|+++.+++++..+ ...+..+..|.||||+|+ ..| ..+++++|++.+.+ ++..+..|+|
T Consensus 7 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~---~~g-------~~~~v~~Ll~~g~~-~~~~~~~g~t 75 (231)
T 3aji_A 7 NIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWAC---SAG-------HTEIVEFLLQLGVP-VNDKDDAGWS 75 (231)
T ss_dssp SSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHH---HHT-------CHHHHHHHHHTTCC-SCCCCTTSCC
T ss_pred cchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHH---HcC-------cHHHHHHHHHhCCC-CCCcCCCCCC
Confidence 68999999999999999998764 446778999999999954 444 48999999999987 5777999999
Q ss_pred HHHHHHHhCCHHHHHHHHHhhhcCCch----------hhhcCchhHHHHHh------hccCCCCCcHhHHHHHcCCHHHH
Q 048100 81 PLHVAARYGHAAVVGALIEFAEKQPGQ----------ELESGVKSTTRYML------GMKNDEEDTALHEAVQSGSLDVV 144 (161)
Q Consensus 81 ~l~~a~~~~~~~~~~~Ll~~g~~~~~~----------~~~~~~~~~~~~l~------~~~~~~g~t~l~~a~~~~~~~~~ 144 (161)
|||+|+..|+.+++++|++.|.+.... +...++.+++++++ +.++..|.||||+|+..|+.+++
T Consensus 76 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v 155 (231)
T 3aji_A 76 PLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMV 155 (231)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred HHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHH
Confidence 999999999999999999999886544 45667777888886 45778999999999999999999
Q ss_pred HHHHhCCCCCCCCcC
Q 048100 145 EILLGADPAFPYSAN 159 (161)
Q Consensus 145 ~~Ll~~~~~~~~~~~ 159 (161)
++|++.|++++.++.
T Consensus 156 ~~Ll~~g~~~~~~~~ 170 (231)
T 3aji_A 156 HILLFYKASTNIQDT 170 (231)
T ss_dssp HHHHHTTCCSCCCCT
T ss_pred HHHHhcCCCccccCC
Confidence 999999999886643
No 40
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.94 E-value=9.9e-26 Score=159.32 Aligned_cols=146 Identities=22% Similarity=0.236 Sum_probs=127.4
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcH
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSP 81 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 81 (161)
.||||.|+..|+.+.+++|++.+..++..|..|.||||+|+ ..+ ..+++++|++.++++ + .+..|.||
T Consensus 93 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~---~~~-------~~~~v~~Ll~~g~~~-~-~~~~g~t~ 160 (285)
T 3d9h_A 93 VSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNAC---VSG-------SWDCVNLLLQHGASV-Q-PESDLASP 160 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHH---HHT-------CHHHHHHHHHTTCCS-S-CSCTTSCH
T ss_pred CCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHH---HcC-------HHHHHHHHHHCCCCC-C-CCCCCCCH
Confidence 48999999999999999999999999999999999999955 444 489999999998874 3 34569999
Q ss_pred HHHHHHhCCHHHHHHHHHhhhcCCch----------hhhcCchhHHHHHhhc-----cCCCCCcHhHHHHHcCCHHHHHH
Q 048100 82 LHVAARYGHAAVVGALIEFAEKQPGQ----------ELESGVKSTTRYMLGM-----KNDEEDTALHEAVQSGSLDVVEI 146 (161)
Q Consensus 82 l~~a~~~~~~~~~~~Ll~~g~~~~~~----------~~~~~~~~~~~~l~~~-----~~~~g~t~l~~a~~~~~~~~~~~ 146 (161)
||+|+..|+.+++++|++.|++.+.. +...|+.+++++|++. .+..|.||||+|+..++.+++++
T Consensus 161 L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~g~t~L~~A~~~~~~~~v~~ 240 (285)
T 3d9h_A 161 IHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVVRTASEELACL 240 (285)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTBCHHHHHHHTTCHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHH
Confidence 99999999999999999999887654 4677778889998742 47789999999999999999999
Q ss_pred HHhCCCCCCCCcC
Q 048100 147 LLGADPAFPYSAN 159 (161)
Q Consensus 147 Ll~~~~~~~~~~~ 159 (161)
|+++|++++.++.
T Consensus 241 Ll~~gad~~~~d~ 253 (285)
T 3d9h_A 241 LMDFGADTQAKNA 253 (285)
T ss_dssp HHHTTCCTTCCCT
T ss_pred HHHCCCCCCCcCC
Confidence 9999999987664
No 41
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.94 E-value=1.1e-25 Score=153.63 Aligned_cols=148 Identities=19% Similarity=0.226 Sum_probs=124.0
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCcc-ccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhC--ccchhccCCCC
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLG-SLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETC--PSLLLQVNAKG 78 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~-~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~--~~~~~~~~~~~ 78 (161)
+||||.|++.|+.+.++.|++.+... +..+..|.||||+| +..| ..+++++|++.+ .+.....+..|
T Consensus 3 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A---~~~~-------~~~~v~~Ll~~~~~~~~~~~~~~~g 72 (228)
T 2dzn_A 3 NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWS---VSFQ-------AHEITSFLLSKMENVNLDDYPDDSG 72 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHH---HHTT-------CHHHHHHHHHTCTTCCGGGCCCTTS
T ss_pred ccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHH---HHcC-------CHHHHHHHHhccccccccccCCCCC
Confidence 68999999999999999999877665 44899999999995 4455 489999999998 55333378999
Q ss_pred CcHHHHHHHhCCHHHHHHHHHhh--hcCCch----------hhhcCchhHHHHHh------hccCCCCCcHhHHHHHcCC
Q 048100 79 DSPLHVAARYGHAAVVGALIEFA--EKQPGQ----------ELESGVKSTTRYML------GMKNDEEDTALHEAVQSGS 140 (161)
Q Consensus 79 ~t~l~~a~~~~~~~~~~~Ll~~g--~~~~~~----------~~~~~~~~~~~~l~------~~~~~~g~t~l~~a~~~~~ 140 (161)
+||||+|+..|+.+++++|++.| .+.... +...++.+++++|+ +.+|..|+||||+|+..|+
T Consensus 73 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 152 (228)
T 2dzn_A 73 WTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGS 152 (228)
T ss_dssp CCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTC
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCC
Confidence 99999999999999999999998 544332 45667777888887 4678899999999999999
Q ss_pred HHHHHHHHhCC-CCCCCCcC
Q 048100 141 LDVVEILLGAD-PAFPYSAN 159 (161)
Q Consensus 141 ~~~~~~Ll~~~-~~~~~~~~ 159 (161)
.+++++|++.| ++++.++.
T Consensus 153 ~~~v~~Ll~~g~~~~~~~d~ 172 (228)
T 2dzn_A 153 LKLIELLCGLGKSAVNWQDK 172 (228)
T ss_dssp HHHHHHHHTTTCCCSCCCCT
T ss_pred HHHHHHHHhcCcccccCcCC
Confidence 99999999999 77776543
No 42
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.94 E-value=1.4e-25 Score=154.20 Aligned_cols=147 Identities=18% Similarity=0.260 Sum_probs=125.6
Q ss_pred ChHHHHHHHcCChHHHHHHHh----hhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCC
Q 048100 2 NSDLYEAAAKGVIEPFNQLAI----DRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAK 77 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~----~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~ 77 (161)
.||||.|++.|+++.+++|++ .+...+..+..|.||||+| +..| ..+++++|++.|++ ++..+..
T Consensus 10 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A---~~~~-------~~~~v~~Ll~~g~~-~~~~~~~ 78 (241)
T 1k1a_A 10 DTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLA---VITT-------LPSVVRLLVTAGAS-PMALDRH 78 (241)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHH---HHTT-------CHHHHHHHHHTTCC-TTCCCTT
T ss_pred CcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHH---HHcC-------CHHHHHHHHHcCCC-ccccCCC
Confidence 589999999999999999986 6778899999999999995 4455 48999999999987 5677999
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHhhh----cCCch----------hhhcCchhHHHHHhh------ccC-CCCCcHhHHHH
Q 048100 78 GDSPLHVAARYGHAAVVGALIEFAE----KQPGQ----------ELESGVKSTTRYMLG------MKN-DEEDTALHEAV 136 (161)
Q Consensus 78 ~~t~l~~a~~~~~~~~~~~Ll~~g~----~~~~~----------~~~~~~~~~~~~l~~------~~~-~~g~t~l~~a~ 136 (161)
|.||||+|+..++.+++++|++.+. +.... +...|..++++++++ ..+ ..|.||||+|+
T Consensus 79 g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~ 158 (241)
T 1k1a_A 79 GQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAV 158 (241)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHH
Confidence 9999999999999999999999987 33222 456677778888873 345 68999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCCCcC
Q 048100 137 QSGSLDVVEILLGADPAFPYSAN 159 (161)
Q Consensus 137 ~~~~~~~~~~Ll~~~~~~~~~~~ 159 (161)
..|+.+++++|++.|++++.++.
T Consensus 159 ~~~~~~~v~~Ll~~g~~~~~~~~ 181 (241)
T 1k1a_A 159 ENNSLSMVQLLLQHGANVNAQMY 181 (241)
T ss_dssp HTTCHHHHHHHHHTTCCTTCBCT
T ss_pred HcCCHHHHHHHHHcCCCCCCcCC
Confidence 99999999999999999986653
No 43
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.94 E-value=1.4e-25 Score=161.68 Aligned_cols=93 Identities=17% Similarity=0.070 Sum_probs=82.7
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcH
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSP 81 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 81 (161)
.||||.|+..|+.+.+++|++.+..++..+..|.||||+| +..| +.+++++|++.|++ ++..+..|.||
T Consensus 59 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A---~~~g-------~~~iv~~Ll~~g~~-~~~~~~~g~t~ 127 (351)
T 3utm_A 59 STPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNA---CSYG-------HYEVTELLLKHGAC-VNAMDLWQFTP 127 (351)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH---HHTT-------CHHHHHHHHHTTCC-TTCCCTTCCCH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHH---HHCC-------CHHHHHHHHHCCCC-CCCCCCCCCCH
Confidence 4899999999999999999999999999999999999995 4455 48999999999887 56778999999
Q ss_pred HHHHHHhCCHHHHHHHHHhhhcCC
Q 048100 82 LHVAARYGHAAVVGALIEFAEKQP 105 (161)
Q Consensus 82 l~~a~~~~~~~~~~~Ll~~g~~~~ 105 (161)
||+|+..|+.+++++|+++|++..
T Consensus 128 L~~A~~~~~~~~v~~Ll~~g~~~~ 151 (351)
T 3utm_A 128 LHEAASKNRVEVCSLLLSHGADPT 151 (351)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCc
Confidence 999999999999999999988754
No 44
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.94 E-value=3.4e-26 Score=152.82 Aligned_cols=122 Identities=20% Similarity=0.221 Sum_probs=112.5
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcH
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSP 81 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 81 (161)
.||||.|+..|+.+.++.|++.+..++..+..|.||||+|+ ..+ ..+++++|++.|++ ++..+..|.||
T Consensus 69 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~---~~~-------~~~~v~~Ll~~g~~-~~~~~~~g~t~ 137 (192)
T 2rfm_A 69 STALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSI---IFG-------YSEMSYFLLEHGAN-VNDRNLEGETP 137 (192)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHH---HHT-------CHHHHHHHHHTTCC-SSCCCTTCCCH
T ss_pred ccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH---HcC-------CHHHHHHHHHCCCC-CCCCCCCCCCH
Confidence 48999999999999999999999999999999999999954 444 48999999999987 57789999999
Q ss_pred HHHHHHhCCHHHHHHHHHhhhcCCchhhhcCchhHHHHHhhccCCCCCcHhHHHHHcCCHHHHHHHHhCC
Q 048100 82 LHVAARYGHAAVVGALIEFAEKQPGQELESGVKSTTRYMLGMKNDEEDTALHEAVQSGSLDVVEILLGAD 151 (161)
Q Consensus 82 l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~l~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~ 151 (161)
||+|+..|+.+++++|+++|++ ++.+|..|.||+++|+..|+.+++++|++.|
T Consensus 138 L~~A~~~~~~~~v~~Ll~~ga~-----------------~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 138 LIVASKYGRSEIVKKLLELGAD-----------------ISARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCC-----------------TTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCC-----------------CCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 9999999999999999999998 7788999999999999999999999999754
No 45
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.94 E-value=1.3e-25 Score=154.17 Aligned_cols=147 Identities=24% Similarity=0.248 Sum_probs=128.0
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcH
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSP 81 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 81 (161)
.||||.|+..|+.+.+++|++.+..++..+..|.||||+|+ ..| ..+++++|++.|.+ ++..+..|.||
T Consensus 12 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~---~~~-------~~~~v~~Ll~~g~~-~~~~~~~g~t~ 80 (237)
T 3b7b_A 12 RSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAA---ENN-------HLEAVKYLIKAGAL-VDPKDAEGSTC 80 (237)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH---HTT-------CHHHHHHHHTTTCC-CCCCCTTSCCH
T ss_pred CCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHH---HhC-------CHHHHHHHHhCCCC-CCCCCCCCCcH
Confidence 58999999999999999999999999999999999999954 444 48999999999987 56778999999
Q ss_pred HHHHHHhCCHHHHHHHHHhh-hcCCch----------hhhcCchhHHHHHh------hccCCCCCcHhHHHHHcCCHHHH
Q 048100 82 LHVAARYGHAAVVGALIEFA-EKQPGQ----------ELESGVKSTTRYML------GMKNDEEDTALHEAVQSGSLDVV 144 (161)
Q Consensus 82 l~~a~~~~~~~~~~~Ll~~g-~~~~~~----------~~~~~~~~~~~~l~------~~~~~~g~t~l~~a~~~~~~~~~ 144 (161)
||+|+..|+.+++++|++.| .+.... +...+..+++++|+ +.++..|.||||+|+..|+.+++
T Consensus 81 L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~ 160 (237)
T 3b7b_A 81 LHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIA 160 (237)
T ss_dssp HHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHH
T ss_pred HHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHH
Confidence 99999999999999999998 443322 45667778888886 46788999999999999999999
Q ss_pred HHHHhCCCCCCCCcC
Q 048100 145 EILLGADPAFPYSAN 159 (161)
Q Consensus 145 ~~Ll~~~~~~~~~~~ 159 (161)
++|++.|++++..+.
T Consensus 161 ~~Ll~~g~~~~~~~~ 175 (237)
T 3b7b_A 161 EILLAAKCDLHAVNI 175 (237)
T ss_dssp HHHHTTTCCTTCCCT
T ss_pred HHHHHcCCCCCCcCC
Confidence 999999999886653
No 46
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.94 E-value=2.5e-26 Score=150.24 Aligned_cols=125 Identities=21% Similarity=0.196 Sum_probs=114.7
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcH
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSP 81 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 81 (161)
.||||.|+..|+.+.+++|++.+..++..+..|.||||+|+ ..+ ..+++++|++.+++ ++..+..|.||
T Consensus 37 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~---~~~-------~~~~v~~Ll~~g~~-~~~~~~~g~t~ 105 (167)
T 3v31_A 37 FTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLAC---SKG-------YTDIVKMLLDCGVD-VNEYDWNGGTP 105 (167)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH---HHT-------CHHHHHHHHHHTCC-TTCCCTTSCCH
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHH---HcC-------CHHHHHHHHHCCCC-CCcCCCCCCCH
Confidence 58999999999999999999999999999999999999954 444 48999999999987 57789999999
Q ss_pred HHHHHHhCCHHHHHHHHHhhhcCCchhhhcCchhHHHHHhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCCCC
Q 048100 82 LHVAARYGHAAVVGALIEFAEKQPGQELESGVKSTTRYMLGMKNDEEDTALHEAVQSGSLDVVEILLGADPAF 154 (161)
Q Consensus 82 l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~l~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~ 154 (161)
||+|+..|+.+++++|+++|++ ++.+|..|.||+++|+..|+.+++++|+++++++
T Consensus 106 L~~A~~~~~~~~v~~Ll~~g~~-----------------~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~ 161 (167)
T 3v31_A 106 LLYAVHGNHVKCVKMLLESGAD-----------------PTIETDSGYNSMDLAVALGYRSVQQVIESHLLKL 161 (167)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC-----------------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCC-----------------CCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 9999999999999999999998 7788999999999999999999999999876654
No 47
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.94 E-value=5.5e-26 Score=165.27 Aligned_cols=148 Identities=15% Similarity=0.144 Sum_probs=104.5
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccch----------
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLL---------- 71 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~---------- 71 (161)
.||||.|+..|+++.|++|++.+..++..|..|.||||+|+. .| +.+++++|++.+++..
T Consensus 21 ~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~---~g-------~~~~v~~Ll~~g~~~~~~~g~t~L~~ 90 (364)
T 3ljn_A 21 MEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACK---FG-------CVDTAKYLASVGEVHSLWHGQKPIHL 90 (364)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH---HC-------CHHHHHHHHHHCCCCCCBTTBCHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHH---cC-------CHHHHHHHHHCCCCccccCCCCHHHH
Confidence 378999999999999999999998899999999999999554 33 3566666666654311
Q ss_pred ------------------------hc-----------------cCCCCCcHHHHHHHhC--CHHHHHHHHHhhhcCCch-
Q 048100 72 ------------------------LQ-----------------VNAKGDSPLHVAARYG--HAAVVGALIEFAEKQPGQ- 107 (161)
Q Consensus 72 ------------------------~~-----------------~~~~~~t~l~~a~~~~--~~~~~~~Ll~~g~~~~~~- 107 (161)
+. .+..|.||||+|+..| +.+++++|++.|++++..
T Consensus 91 A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d 170 (364)
T 3ljn_A 91 AVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKD 170 (364)
T ss_dssp HHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCC
T ss_pred HHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccC
Confidence 11 4456677777777777 677777777776665443
Q ss_pred ---------hhhcCchhHHHHHh-----------hccCCCCCcHhHHHHHcCCHHHHHHHHhCCCCCCCCcC
Q 048100 108 ---------ELESGVKSTTRYML-----------GMKNDEEDTALHEAVQSGSLDVVEILLGADPAFPYSAN 159 (161)
Q Consensus 108 ---------~~~~~~~~~~~~l~-----------~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 159 (161)
+...|+.+++++|+ +..|..|+||||+|+..|+.+++++|+++|++++.++.
T Consensus 171 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~ 242 (364)
T 3ljn_A 171 KADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDN 242 (364)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Confidence 34555666666664 24556777777777777777777777777777765543
No 48
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.94 E-value=1.5e-26 Score=163.56 Aligned_cols=145 Identities=20% Similarity=0.176 Sum_probs=124.0
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcH
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSP 81 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 81 (161)
.||||+|+..|+.+.++.|++.+..++.. .|.||||+ |+..|+ .+++++|++.|++ ++..+..|+||
T Consensus 32 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~g~t~L~~---A~~~g~-------~~~v~~Ll~~ga~-~~~~d~~g~t~ 98 (285)
T 3kea_A 32 HSASYYAIADNNVRLVCTLLNAGALKNLL--ENEFPLHQ---AATLED-------TKIVKILLFSGLD-DSQFDDKGNTA 98 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTGGGSCC--TTCCHHHH---HTTSSS-------CHHHHHHHHTTCC-TTCCCTTSCCH
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCCCCC--CCCCHHHH---HHHcCC-------HHHHHHHHHCCCC-CCCcCCCCCcH
Confidence 48999999999999999999998888777 49999999 556664 8899999999988 57789999999
Q ss_pred HHHHHHhCCHHHHHHHHHhhhcCCch-----------hhhcCchhHHHHHhhc----cCC-CCCcHhHHHHHcCCHHHHH
Q 048100 82 LHVAARYGHAAVVGALIEFAEKQPGQ-----------ELESGVKSTTRYMLGM----KND-EEDTALHEAVQSGSLDVVE 145 (161)
Q Consensus 82 l~~a~~~~~~~~~~~Ll~~g~~~~~~-----------~~~~~~~~~~~~l~~~----~~~-~g~t~l~~a~~~~~~~~~~ 145 (161)
||+|+..|+.+++++|+++|++.... +...|+.+++++|+.. .+. .|.||||+|+..|+.++++
T Consensus 99 L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~ 178 (285)
T 3kea_A 99 LYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMI 178 (285)
T ss_dssp HHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCCSTHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccCCccHHHHHHHcChHHHHH
Confidence 99999999999999999999886543 3456677788888843 233 7889999999999999999
Q ss_pred HHHhCCCCCCCCcC
Q 048100 146 ILLGADPAFPYSAN 159 (161)
Q Consensus 146 ~Ll~~~~~~~~~~~ 159 (161)
+|+++|++++.++.
T Consensus 179 ~Ll~~gad~n~~~~ 192 (285)
T 3kea_A 179 LLLDYMTSTNTNNS 192 (285)
T ss_dssp HHHHHHHHTCTTCC
T ss_pred HHHHcCCCCCcccC
Confidence 99999988876653
No 49
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.94 E-value=1.3e-25 Score=166.81 Aligned_cols=145 Identities=23% Similarity=0.226 Sum_probs=107.8
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcH
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSP 81 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 81 (161)
.||||.|+..|+++.|++|++.+..++..+..|.||||+|+ ..| +.+++++|++.+++ ++..+..|.||
T Consensus 15 ~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~---~~g-------~~~~v~~Ll~~g~~-~~~~~~~g~t~ 83 (437)
T 1n11_A 15 LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAA---RAG-------HTEVAKYLLQNKAK-VNAKAKDDQTP 83 (437)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHH---HHT-------CHHHHHHHHHHTCC-SSCCCTTSCCH
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH---HcC-------CHHHHHHHHhCCCC-CCCCCCCCCCH
Confidence 47888888888888888888888888888888888888854 444 47888888888876 46677888888
Q ss_pred HHHHHHhCCHHHHHHHHHhhhcCCch----------hhhcCchhHHHHHhh------ccCCCCCcHhHHHHHcCCHHHHH
Q 048100 82 LHVAARYGHAAVVGALIEFAEKQPGQ----------ELESGVKSTTRYMLG------MKNDEEDTALHEAVQSGSLDVVE 145 (161)
Q Consensus 82 l~~a~~~~~~~~~~~Ll~~g~~~~~~----------~~~~~~~~~~~~l~~------~~~~~g~t~l~~a~~~~~~~~~~ 145 (161)
||+|+..|+.+++++|+++|++.+.. +...|+.+++++++. ..+..|.||||+|+..|+.++++
T Consensus 84 L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~ 163 (437)
T 1n11_A 84 LHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAE 163 (437)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHH
Confidence 88888888888888888888765433 345555666666653 34556677777777777777777
Q ss_pred HHHhCCCCCCCC
Q 048100 146 ILLGADPAFPYS 157 (161)
Q Consensus 146 ~Ll~~~~~~~~~ 157 (161)
+|++.|++++..
T Consensus 164 ~Ll~~g~~~~~~ 175 (437)
T 1n11_A 164 LLLERDAHPNAA 175 (437)
T ss_dssp HHHHTTCCTTCC
T ss_pred HHHhCCCCCCCC
Confidence 777766666544
No 50
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.94 E-value=2.3e-26 Score=173.77 Aligned_cols=130 Identities=20% Similarity=0.187 Sum_probs=115.1
Q ss_pred hHHHHHHHcCChHHHHHHHhhhCccccc------cCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCC
Q 048100 3 SDLYEAAAKGVIEPFNQLAIDRQLGSLV------IHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNA 76 (161)
Q Consensus 3 ~~l~~A~~~g~~~~v~~ll~~~~~~~~~------~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~ 76 (161)
+.||.|+..|+++.++.|+..+.+++.. +..|.||||+|+..+..| +.+++++|++.|++ ++..|.
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g-------~~~~v~~Ll~~ga~-vn~~d~ 205 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQA-------SLPLVDFIIQNGGH-LDAKAA 205 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTT-------THHHHHHHHHHSCC-TTCCCS
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccc-------cHHHHHHHHHcCCC-CCccCC
Confidence 4699999999999999999999988776 889999999976544455 48999999999988 578899
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHhhhcCCchhhhcCchhHHHHHhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCCCCCC
Q 048100 77 KGDSPLHVAARYGHAAVVGALIEFAEKQPGQELESGVKSTTRYMLGMKNDEEDTALHEAVQSGSLDVVEILLGADPAFPY 156 (161)
Q Consensus 77 ~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~l~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~ 156 (161)
.|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++|++++.
T Consensus 206 ~g~TpLh~A~~~g~~~~v~~Ll~~ga~-----------------~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~ 268 (497)
T 3lvq_E 206 DGNTALHYAALYNQPDCLKLLLKGRAL-----------------VGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA 268 (497)
T ss_dssp SSCCHHHHHTTTTCHHHHHHHHHTCCC-----------------CSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC----
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCC-----------------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC
Confidence 999999999999999999999999999 788899999999999999999999999999999875
Q ss_pred C
Q 048100 157 S 157 (161)
Q Consensus 157 ~ 157 (161)
.
T Consensus 269 ~ 269 (497)
T 3lvq_E 269 F 269 (497)
T ss_dssp -
T ss_pred C
Confidence 3
No 51
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.94 E-value=5.8e-27 Score=161.74 Aligned_cols=126 Identities=17% Similarity=0.234 Sum_probs=81.9
Q ss_pred hHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcHH
Q 048100 3 SDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSPL 82 (161)
Q Consensus 3 ~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l 82 (161)
|+||.|+..|+.+.++.|++.+.+++..|..|.||||+|+ ..| +.+++++|++.|++ ++..|..|+|||
T Consensus 39 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~---~~g-------~~~~v~~Ll~~ga~-~~~~d~~g~tpL 107 (239)
T 1ycs_B 39 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAV---CAG-------HTEIVKFLVQFGVN-VNAADSDGWTPL 107 (239)
T ss_dssp HHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHH---HHT-------CHHHHHHHHHHTCC-TTCCCTTCCCHH
T ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH---HcC-------CHHHHHHHHHcCCC-CCccCCCCCCHH
Confidence 5667777777777777776666666666667777777733 333 36677777776665 455566677777
Q ss_pred HHHHHhCCHHHHHHHHHhhhcCCchhhhcCchhHHHHHhhccCCCCC-cHhHHH--HHcCCHHHHHHHHhCCCCCCC
Q 048100 83 HVAARYGHAAVVGALIEFAEKQPGQELESGVKSTTRYMLGMKNDEED-TALHEA--VQSGSLDVVEILLGADPAFPY 156 (161)
Q Consensus 83 ~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~l~~~~~~~g~-t~l~~a--~~~~~~~~~~~Ll~~~~~~~~ 156 (161)
|+|+..|+.+++++|+++|++ ++.++..|. ||+|+| +..|+.+++++|++.|++++.
T Consensus 108 ~~A~~~~~~~~v~~Ll~~ga~-----------------~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~ 167 (239)
T 1ycs_B 108 HCAASCNNVQVCKFLVESGAA-----------------VFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGI 167 (239)
T ss_dssp HHHHHTTCHHHHHHHHHTTCC-----------------TTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTT
T ss_pred HHHHHcCCHHHHHHHHHcCCC-----------------cceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcccc
Confidence 777777777777777777666 444555444 777766 556667777777766665544
No 52
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.94 E-value=8e-26 Score=159.18 Aligned_cols=134 Identities=17% Similarity=0.170 Sum_probs=106.1
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhC-ccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCc
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQ-LGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDS 80 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~-~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t 80 (161)
.||||+|+..|+.+.++.|++.+. ..+..+..|.||||+|+... ....+..+++++|++.|.. ....+..|+|
T Consensus 112 ~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~-----~~~~~~~~~v~~Ll~~g~~-~~~~~~~g~t 185 (276)
T 4hbd_A 112 NTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALAT-----LKTQDDIETVLQLFRLGNI-NAKASQAGQT 185 (276)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCC-----CCSHHHHHHHHHHHHHSCT-TCCCTTTCCC
T ss_pred CCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHH-----hhhhhhHHHHHHHHHcCCC-ccccCCCCCC
Confidence 589999999999999999999987 88999999999999954211 0111258899999999866 4667888999
Q ss_pred HHHHHHHhCCHHHHHHHHHhhhcCCchhhhcCchhHHHHHhhccCCCCCcHhHHHHHcCCHHHHHHHHh-CCCCCCCCc
Q 048100 81 PLHVAARYGHAAVVGALIEFAEKQPGQELESGVKSTTRYMLGMKNDEEDTALHEAVQSGSLDVVEILLG-ADPAFPYSA 158 (161)
Q Consensus 81 ~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~l~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~-~~~~~~~~~ 158 (161)
|||+|+..|+.+++++|++.|++ ++.+|..|+||||+|+..|+.+++++|++ .|++++.++
T Consensus 186 pLh~A~~~g~~~~v~~Ll~~gad-----------------~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d 247 (276)
T 4hbd_A 186 ALMLAVSHGRVDVVKALLACEAD-----------------VNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTD 247 (276)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCC-----------------TTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCC
T ss_pred HHHHHHHcCCHHHHHHHHhCCCC-----------------CCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcC
Confidence 99999999999999999999998 55566666666666666666666666666 566665444
No 53
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.94 E-value=5.1e-26 Score=159.58 Aligned_cols=135 Identities=14% Similarity=0.132 Sum_probs=112.8
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccC--------------CCCcHHHHHHHHhhhcccccccccHHHHHHHHH--
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIH--------------KKNSVLHVNIIASYTQNKEGESVSTKFVELVLE-- 65 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~--------------~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~-- 65 (161)
.||||.|+..|+.+.++.|++.+..++..+. .|.||||+| +..| ..+++++|++
T Consensus 102 ~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A---~~~g-------~~~~v~~Ll~~~ 171 (273)
T 2pnn_A 102 QTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLA---ACTN-------QLAIVKFLLQNS 171 (273)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHH---HHTT-------CHHHHHHHHHCS
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHH---HHcC-------CHHHHHHHHhcc
Confidence 4899999999999999999999999988887 799999995 4455 4899999999
Q ss_pred -hCccchhccCCCCCcHHHHHHHhCC---------HHHHHHHHHhhhcCCchhhhcCchhHHHHHhhccCCCCCcHhHHH
Q 048100 66 -TCPSLLLQVNAKGDSPLHVAARYGH---------AAVVGALIEFAEKQPGQELESGVKSTTRYMLGMKNDEEDTALHEA 135 (161)
Q Consensus 66 -~~~~~~~~~~~~~~t~l~~a~~~~~---------~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~l~~~~~~~g~t~l~~a 135 (161)
.|++ ++..|..|+||||+|+..|+ .+++++|++.|++.+... .+++.+|..|+||||+|
T Consensus 172 ~~gad-~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~----------~~~~~~d~~g~TpL~~A 240 (273)
T 2pnn_A 172 WQPAD-ISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTL----------KLEEITNRKGLTPLALA 240 (273)
T ss_dssp SCCCC-TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTC----------CGGGCCCTTSCCHHHHH
T ss_pred cCCCC-ceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhccccc----------ccccccCCCCCCHHHHH
Confidence 7887 57889999999999999998 899999999999832110 00135899999999999
Q ss_pred HHcCCHHHHHHHHhCCC-CCCCC
Q 048100 136 VQSGSLDVVEILLGADP-AFPYS 157 (161)
Q Consensus 136 ~~~~~~~~~~~Ll~~~~-~~~~~ 157 (161)
+..|+.+++++|+++|+ |...+
T Consensus 241 ~~~g~~~iv~~Ll~~ga~dp~~~ 263 (273)
T 2pnn_A 241 ASSGKIGVLAYILQREIHEPECR 263 (273)
T ss_dssp HHTTCHHHHHHHHHHHTC-----
T ss_pred HHhChHHHHHHHHHCCCCCchhh
Confidence 99999999999999988 55443
No 54
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.94 E-value=3.8e-26 Score=159.05 Aligned_cols=133 Identities=14% Similarity=0.116 Sum_probs=113.8
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCcccccc--------------CCCCcHHHHHHHHhhhcccccccccHHHHHHHHH--
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVI--------------HKKNSVLHVNIIASYTQNKEGESVSTKFVELVLE-- 65 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~--------------~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~-- 65 (161)
.||||.|+..|+.+.++.|++.+..++..+ ..|.||||+| +..| ..+++++|++
T Consensus 94 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A---~~~g-------~~~~v~~Ll~~~ 163 (260)
T 3jxi_A 94 QTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLA---ACTN-------QPHIVHYLTENG 163 (260)
T ss_dssp BCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHH---HHTT-------CHHHHHHHHHCS
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHH---HHcC-------CHHHHHHHHhcc
Confidence 489999999999999999999999999888 6899999995 4555 4899999999
Q ss_pred -hCccchhccCCCCCcHHHHHHHhCC---------HHHHHHHHHhhhcCCchhhhcCchhHHHHHhhccCCCCCcHhHHH
Q 048100 66 -TCPSLLLQVNAKGDSPLHVAARYGH---------AAVVGALIEFAEKQPGQELESGVKSTTRYMLGMKNDEEDTALHEA 135 (161)
Q Consensus 66 -~~~~~~~~~~~~~~t~l~~a~~~~~---------~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~l~~~~~~~g~t~l~~a 135 (161)
.|++ ++..|..|+||||+|+..++ .+++++|++.|++.... ..+.+.+|..|+||||+|
T Consensus 164 ~~ga~-~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~----------~~~~~~~d~~g~tpL~~A 232 (260)
T 3jxi_A 164 HKQAD-LRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPD----------TNLEALLNNDGLSPLMMA 232 (260)
T ss_dssp SCCCC-TTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTT----------CCGGGCCCTTSCCHHHHH
T ss_pred ccCCC-CcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccc----------cchhhcccCCCCCHHHHH
Confidence 7887 57889999999999999888 79999999999982211 000167999999999999
Q ss_pred HHcCCHHHHHHHHhCCCCCC
Q 048100 136 VQSGSLDVVEILLGADPAFP 155 (161)
Q Consensus 136 ~~~~~~~~~~~Ll~~~~~~~ 155 (161)
+..|+.+++++|+++|++..
T Consensus 233 ~~~g~~~~v~~Ll~~g~~~~ 252 (260)
T 3jxi_A 233 AKTGKIGIFQHIIRREIADA 252 (260)
T ss_dssp HHTTCHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHhCCCcc
Confidence 99999999999998876543
No 55
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.94 E-value=7.5e-26 Score=157.26 Aligned_cols=147 Identities=17% Similarity=0.169 Sum_probs=101.9
Q ss_pred ChHHHHHHHcC-------------ChHHHHHHHhhhCccc-cccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhC
Q 048100 2 NSDLYEAAAKG-------------VIEPFNQLAIDRQLGS-LVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETC 67 (161)
Q Consensus 2 ~~~l~~A~~~g-------------~~~~v~~ll~~~~~~~-~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~ 67 (161)
.||||.|+..| +.+.++.|+..+...+ ..|..|.||||+| +..| ..+++++|++.|
T Consensus 11 ~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A---~~~g-------~~~~v~~Ll~~g 80 (253)
T 1yyh_A 11 FTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLA---ARYS-------RSDAAKRLLEAS 80 (253)
T ss_dssp -----------------------------------------CCCTTSCCHHHHH---HHTT-------CHHHHHHHHHTT
T ss_pred CcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHH---HHcC-------CHHHHHHHHHcC
Confidence 58999999987 8999999998887774 4589999999994 4555 489999999999
Q ss_pred ccchhccCCCCCcHHHHHHHhCCHHHHHHHHHhhh-cCCch----------hhhcCchhHHHHHh------hccCCCCCc
Q 048100 68 PSLLLQVNAKGDSPLHVAARYGHAAVVGALIEFAE-KQPGQ----------ELESGVKSTTRYML------GMKNDEEDT 130 (161)
Q Consensus 68 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~-~~~~~----------~~~~~~~~~~~~l~------~~~~~~g~t 130 (161)
++ ++..+..|+||||+|+..|+.+++++|++.+. +.... +...++.+++++|+ +.+|..|+|
T Consensus 81 ~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t 159 (253)
T 1yyh_A 81 AD-ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKS 159 (253)
T ss_dssp CC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCB
T ss_pred CC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCC
Confidence 87 57789999999999999999999999999987 33322 45666677888886 467889999
Q ss_pred HhHHHHHcCCHHHHHHHHhCCCCCCCCcC
Q 048100 131 ALHEAVQSGSLDVVEILLGADPAFPYSAN 159 (161)
Q Consensus 131 ~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 159 (161)
|||+|+..|+.+++++|++.|++++.++.
T Consensus 160 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 188 (253)
T 1yyh_A 160 ALHWAAAVNNVDAAVVLLKNGANKDMQNN 188 (253)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 99999999999999999999999887654
No 56
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.94 E-value=5.6e-26 Score=157.92 Aligned_cols=132 Identities=17% Similarity=0.154 Sum_probs=113.1
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCC-------------CCcHHHHHHHHhhhcccccccccHHHHHHHHH---
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHK-------------KNSVLHVNIIASYTQNKEGESVSTKFVELVLE--- 65 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~-------------g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~--- 65 (161)
.||||.|+..|+.+.++.|++.+..++..+.. |.||||+| +..| ..+++++|++
T Consensus 91 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A---~~~~-------~~~~v~~Ll~~~~ 160 (256)
T 2etb_A 91 HSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLA---ACTK-------QWDVVTYLLENPH 160 (256)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHH---HHTT-------CHHHHHHHHHCSS
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHH---HHcC-------CHHHHHHHHhccc
Confidence 48999999999999999999999999888876 99999995 4455 4899999999
Q ss_pred hCccchhccCCCCCcHHHHHHH--hCCHH-------HHHHHHHhhhcCCchhhhcCchhHHHHHhhccCCCCCcHhHHHH
Q 048100 66 TCPSLLLQVNAKGDSPLHVAAR--YGHAA-------VVGALIEFAEKQPGQELESGVKSTTRYMLGMKNDEEDTALHEAV 136 (161)
Q Consensus 66 ~~~~~~~~~~~~~~t~l~~a~~--~~~~~-------~~~~Ll~~g~~~~~~~~~~~~~~~~~~l~~~~~~~g~t~l~~a~ 136 (161)
.|++ ++..|..|+||||+|+. .++.+ ++++|++.|++.... ..+++.+|..|+||||+|+
T Consensus 161 ~ga~-~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~----------~~~~~~~d~~g~tpL~~A~ 229 (256)
T 2etb_A 161 QPAS-LEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPT----------VQLEEISNHQGLTPLKLAA 229 (256)
T ss_dssp CCCC-TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTT----------CCGGGCCCTTSCCHHHHHH
T ss_pred cCCC-cCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccc----------cccccccCCCCCCHHHHHH
Confidence 8887 57889999999999999 78888 999999999982100 0001789999999999999
Q ss_pred HcCCHHHHHHHHhCCCCC
Q 048100 137 QSGSLDVVEILLGADPAF 154 (161)
Q Consensus 137 ~~~~~~~~~~Ll~~~~~~ 154 (161)
..|+.+++++|+++|++.
T Consensus 230 ~~g~~~~v~~Ll~~g~~~ 247 (256)
T 2etb_A 230 KEGKIEIFRHILQREFSG 247 (256)
T ss_dssp HTTCHHHHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHhCCCCC
Confidence 999999999999887653
No 57
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.94 E-value=3.9e-26 Score=160.30 Aligned_cols=147 Identities=22% Similarity=0.193 Sum_probs=100.9
Q ss_pred hHHHHHHHcCChHHHHHHHhhhCc--------cccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhcc
Q 048100 3 SDLYEAAAKGVIEPFNQLAIDRQL--------GSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQV 74 (161)
Q Consensus 3 ~~l~~A~~~g~~~~v~~ll~~~~~--------~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~ 74 (161)
++|+.|++.|+++.|+.|++.+.. .+..+..|.||||+|+ ..++ ...++++|++.|++ ++..
T Consensus 13 ~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~---~~~~------~~~~v~~Ll~~Gad-vn~~ 82 (269)
T 4b93_B 13 EKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCP---KCAP------AQKRLAKVPASGLG-VNVT 82 (269)
T ss_dssp HHHHHHHHTTCHHHHHHHHTCC-------------------------------------------------CCCC-TTCC
T ss_pred hHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHH---HhCC------HHHHHHHHHHCCCC-CCCc
Confidence 689999999999999999976653 3456778999999954 3332 24588999999988 5788
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHHhhhcCCch----------hhhcCchhHHHHHh------hccCCCCCcHhHHHHHc
Q 048100 75 NAKGDSPLHVAARYGHAAVVGALIEFAEKQPGQ----------ELESGVKSTTRYML------GMKNDEEDTALHEAVQS 138 (161)
Q Consensus 75 ~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~----------~~~~~~~~~~~~l~------~~~~~~g~t~l~~a~~~ 138 (161)
|.+|+||||+|+..|+.+++++|++.|++.... +...+..+++++|+ +.+|..|+||||+|+..
T Consensus 83 d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~ 162 (269)
T 4b93_B 83 SQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSG 162 (269)
T ss_dssp CTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHT
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC
Confidence 999999999999999999999999999886655 34555666788776 56889999999999999
Q ss_pred CCHHHHHHHHhCCCCCCCCcC
Q 048100 139 GSLDVVEILLGADPAFPYSAN 159 (161)
Q Consensus 139 ~~~~~~~~Ll~~~~~~~~~~~ 159 (161)
|+.+++++|++.|++++.++.
T Consensus 163 g~~~~v~~Ll~~gadvn~~~~ 183 (269)
T 4b93_B 163 GHHELVALLLQHGASINASNN 183 (269)
T ss_dssp TCGGGHHHHHHTTCCTTCBCT
T ss_pred CCHHHHHHHHHCCCCCCcccc
Confidence 999999999999999987654
No 58
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.94 E-value=3.4e-25 Score=150.84 Aligned_cols=144 Identities=17% Similarity=0.146 Sum_probs=122.5
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhC-ccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCc
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQ-LGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDS 80 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~-~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t 80 (161)
.||||.|+..|+.+.+++|++.+. ..+..+..|.||||+|+ ..+ ..+++++|++.+++ ++..+..|.|
T Consensus 59 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~---~~~-------~~~~~~~Ll~~g~~-~~~~~~~g~t 127 (223)
T 2f8y_A 59 RTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAA---RLA-------VEGMLEDLINSHAD-VNAVDDLGKS 127 (223)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHH---HHT-------CHHHHHHHHHTTCC-TTCBCTTSCB
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHH---HhC-------cHHHHHHHHHcCCC-CcCcCCCCCc
Confidence 489999999999999999998775 77888899999999954 444 48899999998887 5677889999
Q ss_pred HHHHHHHhCCHHHHHHHHHhhhcCCch----------hhhcCchhHHHHHh------hccCCCCCcHhHHHHHcCCHHHH
Q 048100 81 PLHVAARYGHAAVVGALIEFAEKQPGQ----------ELESGVKSTTRYML------GMKNDEEDTALHEAVQSGSLDVV 144 (161)
Q Consensus 81 ~l~~a~~~~~~~~~~~Ll~~g~~~~~~----------~~~~~~~~~~~~l~------~~~~~~g~t~l~~a~~~~~~~~~ 144 (161)
|||+|+..++.+++++|++.|++.+.. +...|+.+++++|+ +.+|..|.||+++|+..++.+++
T Consensus 128 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~ 207 (223)
T 2f8y_A 128 ALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIV 207 (223)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHH
Confidence 999999999999999999998886654 45667777888886 46788999999999999999999
Q ss_pred HHHHhCCCCCCC
Q 048100 145 EILLGADPAFPY 156 (161)
Q Consensus 145 ~~Ll~~~~~~~~ 156 (161)
++|+++|+....
T Consensus 208 ~~L~~~g~~~~~ 219 (223)
T 2f8y_A 208 RLLDEYNLVRSP 219 (223)
T ss_dssp HHHHHTTCSSCC
T ss_pred HHHHHcCCCccc
Confidence 999999987543
No 59
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.93 E-value=4e-25 Score=151.41 Aligned_cols=111 Identities=22% Similarity=0.201 Sum_probs=89.7
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCcc-----ccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCC
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLG-----SLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNA 76 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~-----~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~ 76 (161)
.||||.|+..|+.+.++.|++.+... +..|..|.||||+| +..+ ..+++++|++.|+++ +..+.
T Consensus 38 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A---~~~~-------~~~~v~~Ll~~g~~~-~~~~~ 106 (232)
T 2rfa_A 38 ETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIA---VINQ-------NVNLVRALLARGASV-SARAT 106 (232)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHH---HHTT-------CHHHHHHHHHTTCCT-TCCCC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHH---HHcC-------CHHHHHHHHhCCCCC-CcccC
Confidence 58999999999999999999887765 56678999999995 4455 489999999999874 44333
Q ss_pred -------------CCCcHHHHHHHhCCHHHHHHHHHhhhcCCch----------hhhcCchhHH----HHHhhc
Q 048100 77 -------------KGDSPLHVAARYGHAAVVGALIEFAEKQPGQ----------ELESGVKSTT----RYMLGM 123 (161)
Q Consensus 77 -------------~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~----------~~~~~~~~~~----~~l~~~ 123 (161)
.|.||||+|+..|+.+++++|+++|++.+.. +...++.+++ ++|+..
T Consensus 107 ~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~ 180 (232)
T 2rfa_A 107 GSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSY 180 (232)
T ss_dssp SGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHT
T ss_pred CcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhc
Confidence 7999999999999999999999999987665 3445555555 666543
No 60
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.93 E-value=2.4e-25 Score=165.37 Aligned_cols=147 Identities=22% Similarity=0.239 Sum_probs=125.2
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcH
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSP 81 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 81 (161)
.||||.|+..|+.+.++.|++.+...+..+..|.||||+| +..| +.+++++|++++++ .+..+..|.||
T Consensus 213 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A---~~~g-------~~~~v~~Ll~~~~~-~~~~~~~g~t~ 281 (437)
T 1n11_A 213 YTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLA---AQEG-------HAEMVALLLSKQAN-GNLGNKSGLTP 281 (437)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH---HHTT-------CHHHHHHHHTTTCC-TTCCCTTCCCH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH---HHCC-------CHHHHHHHHhcCCC-CCCCCCCCCCH
Confidence 4789999999999999999998888888889999999994 4444 48899999998877 46778889999
Q ss_pred HHHHHHhCCHHHHHHHHHhhhcCCch----------hhhcCchhHHHHHh------hccCCCCCcHhHHHHHcCCHHHHH
Q 048100 82 LHVAARYGHAAVVGALIEFAEKQPGQ----------ELESGVKSTTRYML------GMKNDEEDTALHEAVQSGSLDVVE 145 (161)
Q Consensus 82 l~~a~~~~~~~~~~~Ll~~g~~~~~~----------~~~~~~~~~~~~l~------~~~~~~g~t~l~~a~~~~~~~~~~ 145 (161)
||+|++.|+.+++++|+++|++.+.. +...|+.+++++|+ +.+|..|+||||+|+..|+.++++
T Consensus 282 L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~ 361 (437)
T 1n11_A 282 LHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVT 361 (437)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHH
Confidence 99999999999999999998876554 45667777888886 568889999999999999999999
Q ss_pred HHHhCCCCCCCCcC
Q 048100 146 ILLGADPAFPYSAN 159 (161)
Q Consensus 146 ~Ll~~~~~~~~~~~ 159 (161)
+|+++|++++.++.
T Consensus 362 ~Ll~~ga~~~~~~~ 375 (437)
T 1n11_A 362 LLLKNGASPNEVSS 375 (437)
T ss_dssp HHHHTTCCSCCCCS
T ss_pred HHHHCcCCCCCCCC
Confidence 99999999887654
No 61
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.93 E-value=2.3e-26 Score=156.90 Aligned_cols=129 Identities=22% Similarity=0.220 Sum_probs=107.7
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHh-CccchhccCCCCCc
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLET-CPSLLLQVNAKGDS 80 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~t 80 (161)
.|+||.|+..|+.+.++.|++.+..++.+|..|.||||+| +..| +.+++++|++. +.+ ++..+..|+|
T Consensus 74 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A---~~~~-------~~~~v~~Ll~~~g~~-~~~~d~~g~t 142 (222)
T 3ehr_A 74 DNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWA---CHGG-------HKDIVEMLFTQPNIE-LNQQNKLGDT 142 (222)
T ss_dssp SCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH---HHTT-------CHHHHHHHTTSTTCC-CCCCCTTSCC
T ss_pred ccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHH---HHcC-------CHHHHHHHHcCCCCC-ccccCCCCCC
Confidence 5899999999999999999999999999999999999994 4555 48999999998 666 6788999999
Q ss_pred HHHHHHHhCCHHHHHHHHHhhhcCCchhhhcCchhHHHHHhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCCCCCCCc
Q 048100 81 PLHVAARYGHAAVVGALIEFAEKQPGQELESGVKSTTRYMLGMKNDEEDTALHEAVQSGSLDVVEILLGADPAFPYSA 158 (161)
Q Consensus 81 ~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~l~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~ 158 (161)
|||+|+..|+.+++++|+++|++ ++.+|..|.|||++|+..++.++++.|++.|++....+
T Consensus 143 pL~~A~~~~~~~~v~~Ll~~ga~-----------------~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~ 203 (222)
T 3ehr_A 143 ALHAAAWKGYADIVQLLLAKGAR-----------------TDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSN 203 (222)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTCC-----------------SCCCCTTSCCHHHHCCSHHHHHHHC-------------
T ss_pred HHHHHHHcCCHHHHHHHHHcCCC-----------------CccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccc
Confidence 99999999999999999999998 77889999999999999999999999999988876544
No 62
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.93 E-value=2.2e-25 Score=160.63 Aligned_cols=149 Identities=17% Similarity=0.178 Sum_probs=118.9
Q ss_pred ChHHHHHHHcCChHHHHHHHh-hhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCc
Q 048100 2 NSDLYEAAAKGVIEPFNQLAI-DRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDS 80 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~-~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t 80 (161)
.||||.|++.|+.+.|+.|+. .+.+++..|..|.|++|+++.++..+. ...++++|+++|++ ++..+..|+|
T Consensus 169 ~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~------~~~i~~lLl~~gad-~n~~d~~g~t 241 (337)
T 4g8k_A 169 ATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSD------VEAITHLLLDHGAD-VNVRGERGKT 241 (337)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTT------HHHHHHHHHHTTCC-TTCCCGGGCC
T ss_pred CcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCccc------HHHHHHHHHHCCCC-CCCcCCCCCC
Confidence 379999999999999999996 478999999999999999665543332 35688999999988 5778999999
Q ss_pred HHHHHHHhCCHHHHHHHHHh-hhcCCch----------hhhcCchhHHHHHhhc-cCCCCCcHhHHHHHcCCHHHHHHHH
Q 048100 81 PLHVAARYGHAAVVGALIEF-AEKQPGQ----------ELESGVKSTTRYMLGM-KNDEEDTALHEAVQSGSLDVVEILL 148 (161)
Q Consensus 81 ~l~~a~~~~~~~~~~~Ll~~-g~~~~~~----------~~~~~~~~~~~~l~~~-~~~~g~t~l~~a~~~~~~~~~~~Ll 148 (161)
|||+|+..|+.+++++|++. |++.+.. +...|+.+++++|++. -|.+..+|||+|+..|+.++|++|+
T Consensus 242 ~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~~~L~~A~~~~~~~iv~~Ll 321 (337)
T 4g8k_A 242 PLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDLVMTARRNYDHSLVKVLL 321 (337)
T ss_dssp HHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 99999999999999999985 5664433 4566667778888754 3556778888888888888888888
Q ss_pred hCCCCCCCC
Q 048100 149 GADPAFPYS 157 (161)
Q Consensus 149 ~~~~~~~~~ 157 (161)
++|+++++.
T Consensus 322 ~~GA~~d~~ 330 (337)
T 4g8k_A 322 SHGAKEDFH 330 (337)
T ss_dssp HTTCCC---
T ss_pred HCcCCCCCC
Confidence 888887754
No 63
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.93 E-value=5.1e-25 Score=147.80 Aligned_cols=119 Identities=23% Similarity=0.294 Sum_probs=100.2
Q ss_pred cCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcHHHHHHHhCCHHHHHHHHHhhhcCCch---
Q 048100 31 IHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSPLHVAARYGHAAVVGALIEFAEKQPGQ--- 107 (161)
Q Consensus 31 ~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~--- 107 (161)
+..+.||||+| +..| ..+.++.|+..+...++..+..|+||||+|+..|+.+++++|++.|++.+..
T Consensus 2 ~~~~~~~L~~A---~~~g-------~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 71 (201)
T 3hra_A 2 KTYEVGALLEA---ANQR-------DTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSI 71 (201)
T ss_dssp -CCCTTHHHHH---HHTT-------CHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT
T ss_pred CcccccHHHHH---HHhc-------cHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC
Confidence 35789999995 4555 4889999999887557888999999999999999999999999999987654
Q ss_pred -------hhhcCchhHHHHHh-------hccCCCCCcHhHHHHHcCCHHHHHHHHhCC-CCCCCCcC
Q 048100 108 -------ELESGVKSTTRYML-------GMKNDEEDTALHEAVQSGSLDVVEILLGAD-PAFPYSAN 159 (161)
Q Consensus 108 -------~~~~~~~~~~~~l~-------~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~-~~~~~~~~ 159 (161)
+...|+.+++++++ +..+..|.||||+|+..|+.+++++|++.| ++++.++.
T Consensus 72 g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 138 (201)
T 3hra_A 72 SDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQND 138 (201)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCT
T ss_pred CCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCC
Confidence 45677778888887 457788999999999999999999999988 77776543
No 64
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.93 E-value=2.3e-25 Score=144.10 Aligned_cols=108 Identities=19% Similarity=0.188 Sum_probs=91.5
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcH
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSP 81 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 81 (161)
.||||. +..|+.+.++.|++.+..++..|..|.||||+| +..| +.+++++|++.|++ ++..+..|+||
T Consensus 37 ~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A---~~~~-------~~~~v~~Ll~~g~~-~~~~~~~g~t~ 104 (156)
T 1bd8_A 37 KTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDA---ARTG-------FLDTLKVLVEHGAD-VNVPDGTGALP 104 (156)
T ss_dssp CCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH---HHTT-------CHHHHHHHHHTTCC-SCCCCTTSCCH
T ss_pred CcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHH---HHcC-------cHHHHHHHHHcCCC-CCCcCCCCCcH
Confidence 589999 999999999999999999999999999999995 4445 48999999999987 57789999999
Q ss_pred HHHHHHhCCHHHHHHHHHhhhcCCch----------hhhcCchhHHHHHhh
Q 048100 82 LHVAARYGHAAVVGALIEFAEKQPGQ----------ELESGVKSTTRYMLG 122 (161)
Q Consensus 82 l~~a~~~~~~~~~~~Ll~~g~~~~~~----------~~~~~~~~~~~~l~~ 122 (161)
||+|+..|+.+++++|++. ++.... +...|+.+++++|++
T Consensus 105 L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~ 154 (156)
T 1bd8_A 105 IHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQG 154 (156)
T ss_dssp HHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHT
T ss_pred HHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHh
Confidence 9999999999999999988 665444 345566667777654
No 65
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.93 E-value=1.6e-26 Score=146.64 Aligned_cols=124 Identities=21% Similarity=0.178 Sum_probs=108.6
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcH
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSP 81 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 81 (161)
.||||.|+..|+.+.+++|++.+..++..|..|.||||+| +..+ ..+++++|++.+++ ++..+..|.||
T Consensus 11 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A---~~~~-------~~~~~~~Ll~~g~~-~~~~~~~g~t~ 79 (137)
T 3c5r_A 11 ETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEA---CNHG-------HLKVVELLLQHKAL-VNTTGYQNDSP 79 (137)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHH---HHTT-------CHHHHHHHHHTTCC-TTCCCGGGCCH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHH---HHcC-------CHHHHHHHHHcCCc-ccCcCCCCCCH
Confidence 5899999999999999999999999999999999999995 4444 48999999999987 57789999999
Q ss_pred HHHHHHhCCHHHHHHHHHhhhcCCchhhhcCchhHHHHHhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCCC
Q 048100 82 LHVAARYGHAAVVGALIEFAEKQPGQELESGVKSTTRYMLGMKNDEEDTALHEAVQSGSLDVVEILLGADPA 153 (161)
Q Consensus 82 l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~l~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~ 153 (161)
||+|+..++.+++++|++.|++ ++.+|..|.||+++|+..+..+++++|.+.+..
T Consensus 80 L~~A~~~~~~~~v~~Ll~~ga~-----------------~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~s 134 (137)
T 3c5r_A 80 LHDAAKNGHVDIVKLLLSYGAS-----------------RNAVNIFGLRPVDYTDDESMKSLLLLPEKNESS 134 (137)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC-----------------TTCCCTTSCCGGGGCCCHHHHHHHSCC------
T ss_pred HHHHHHcCCHHHHHHHHHcCCC-----------------CCCCCCCCCCHHHHHhhccHHHHHhhccccccC
Confidence 9999999999999999999998 788899999999999999999999888765543
No 66
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.93 E-value=7.8e-26 Score=156.08 Aligned_cols=129 Identities=16% Similarity=0.139 Sum_probs=89.6
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcH
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSP 81 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 81 (161)
.|||+.|++.|+.+.++.|++.+...+. +..|.||||+| +..| ..+++++|++.+++ ++..|..|.||
T Consensus 6 ~t~L~~a~~~~~~~~~~~ll~~g~~~~~-~~~~~t~L~~A---~~~g-------~~~~v~~Ll~~g~~-~~~~d~~g~t~ 73 (239)
T 1ycs_B 6 QVSLPPGKRTNLRKTGSERIAHGMRVKF-NPLPLALLLDS---SLEG-------EFDLVQRIIYEVDD-PSLPNDEGITA 73 (239)
T ss_dssp --------------------------------CHHHHHHH---HHHT-------CHHHHHHHTSTTSS-CCCCCTTSCCH
T ss_pred cccCchhhhhhhHHHHHHHhccCCCccc-CchhhHHHHHH---HHcC-------CHHHHHHHHHcCCC-CCCcCCCCCCH
Confidence 4899999999999999999999988874 47899999995 4455 48999999999986 57789999999
Q ss_pred HHHHHHhCCHHHHHHHHHhhhcCCchhhhcCchhHHHHHhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCCCCCCCcC
Q 048100 82 LHVAARYGHAAVVGALIEFAEKQPGQELESGVKSTTRYMLGMKNDEEDTALHEAVQSGSLDVVEILLGADPAFPYSAN 159 (161)
Q Consensus 82 l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~l~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 159 (161)
||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++|++++..++
T Consensus 74 L~~A~~~g~~~~v~~Ll~~ga~-----------------~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 134 (239)
T 1ycs_B 74 LHNAVCAGHTEIVKFLVQFGVN-----------------VNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTY 134 (239)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCC-----------------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCS
T ss_pred HHHHHHcCCHHHHHHHHHcCCC-----------------CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecC
Confidence 9999999999999999999998 788899999999999999999999999999999987664
No 67
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.93 E-value=6.2e-26 Score=141.50 Aligned_cols=111 Identities=14% Similarity=0.148 Sum_probs=100.1
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcH
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSP 81 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 81 (161)
+|+||.|+..|+++.++.|++.+..++..|..|.||||+| +..+ ..+++++|++.+++ ++..|..|+||
T Consensus 8 ~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A---~~~~-------~~~~v~~Ll~~g~~-~~~~d~~g~tp 76 (123)
T 3aaa_C 8 DKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYA---ADCG-------QLEILEFLLLKGAD-INAPDKHHITP 76 (123)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHH---HHTT-------CHHHHHHHHTTTCC-TTCCCTTSCCH
T ss_pred chHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHH---HHcC-------CHHHHHHHHHcCCC-CCcCCCCCCCH
Confidence 4899999999999999999999999999999999999994 4555 48999999999987 57789999999
Q ss_pred HHHHHHhCCHHHHHHHHHhhhcCCchhhhcCchhHHHHHhhccCCCCCcHhHHHHHcCC
Q 048100 82 LHVAARYGHAAVVGALIEFAEKQPGQELESGVKSTTRYMLGMKNDEEDTALHEAVQSGS 140 (161)
Q Consensus 82 l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~l~~~~~~~g~t~l~~a~~~~~ 140 (161)
||+|+..++.+++++|+++|++ ++.+|..|.||+|+|...+.
T Consensus 77 L~~A~~~~~~~~v~~Ll~~ga~-----------------~~~~~~~g~t~l~~A~~~~~ 118 (123)
T 3aaa_C 77 LLSAVYEGHVSCVKLLLSKGAD-----------------KTVKGPDGLTAFEATDNQAI 118 (123)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCC-----------------TTCCCTTSCCHHHHCCCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCC-----------------CCCcCCCCCCHHHHhCCHHH
Confidence 9999999999999999999998 77889999999999944333
No 68
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.93 E-value=1.6e-24 Score=151.94 Aligned_cols=143 Identities=17% Similarity=0.191 Sum_probs=76.6
Q ss_pred hHHHHHHHcCChHHHHHHHhhhCccccc-cCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcH
Q 048100 3 SDLYEAAAKGVIEPFNQLAIDRQLGSLV-IHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSP 81 (161)
Q Consensus 3 ~~l~~A~~~g~~~~v~~ll~~~~~~~~~-~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 81 (161)
|+|+.|++.|+++.+++|++.+..++.. +..|.||||+| +..| +.+++++|++.|++ ++..+..|.||
T Consensus 7 ~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A---~~~g-------~~~~v~~Ll~~g~~-~~~~~~~g~t~ 75 (285)
T 1wdy_A 7 HLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNA---VQMS-------REDIVELLLRHGAD-PVLRKKNGATP 75 (285)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHH---HHTT-------CHHHHHHHHHTTCC-TTCCCTTCCCH
T ss_pred hHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHH---HHcC-------CHHHHHHHHHcCCC-CcccCCCCCCH
Confidence 5566666666666666666655555544 45566666663 2333 25566666665554 34445556666
Q ss_pred HHHHHHhCCHHHHHHHHHhhhcCCch----------hhhcCchhHHHHHhhc------c----------CCCCCcHhHHH
Q 048100 82 LHVAARYGHAAVVGALIEFAEKQPGQ----------ELESGVKSTTRYMLGM------K----------NDEEDTALHEA 135 (161)
Q Consensus 82 l~~a~~~~~~~~~~~Ll~~g~~~~~~----------~~~~~~~~~~~~l~~~------~----------~~~g~t~l~~a 135 (161)
||+|+..|+.+++++|++.|++.... +...|+.++++++++. . +..|.||||+|
T Consensus 76 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A 155 (285)
T 1wdy_A 76 FLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDA 155 (285)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHH
Confidence 66666666666666666655554322 2334444455555421 1 34455555555
Q ss_pred HHcCCHHHHHHHHhC-CCCCCC
Q 048100 136 VQSGSLDVVEILLGA-DPAFPY 156 (161)
Q Consensus 136 ~~~~~~~~~~~Ll~~-~~~~~~ 156 (161)
+..|+.+++++|++. |++++.
T Consensus 156 ~~~~~~~~v~~Ll~~~~~~~~~ 177 (285)
T 1wdy_A 156 AEKGHVEVLKILLDEMGADVNA 177 (285)
T ss_dssp HHHTCHHHHHHHHHTSCCCTTC
T ss_pred HHcCCHHHHHHHHHhcCCCCCc
Confidence 555555555555543 555443
No 69
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.93 E-value=4.6e-25 Score=161.24 Aligned_cols=148 Identities=16% Similarity=0.188 Sum_probs=124.9
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCc--cchhccCCCCC
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCP--SLLLQVNAKGD 79 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~--~~~~~~~~~~~ 79 (161)
.||||.|+..|+.+++++|++.+..++..+..|.||||+| +..| ..+++++|++.+. ..++..+..|.
T Consensus 167 ~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A---~~~g-------~~~~v~~Ll~~~~~~~~~~~~d~~g~ 236 (373)
T 2fo1_E 167 NTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQA---AANR-------DFGMMVYMLNSTKLKGDIEELDRNGM 236 (373)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHH---HHTT-------CHHHHHHHTTSHHHHHTTSCCCTTSC
T ss_pred CCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHH---HHCC-------CHHHHHHHHhcCccccChhhcCCCCC
Confidence 5899999999999999999999999999999999999995 4444 4889999998762 22566788999
Q ss_pred cHHHHHHHhC---CHHHHHHHHHhhhcCCch------------------hhhcCchhHHHHHhh-------ccCCCCCcH
Q 048100 80 SPLHVAARYG---HAAVVGALIEFAEKQPGQ------------------ELESGVKSTTRYMLG-------MKNDEEDTA 131 (161)
Q Consensus 80 t~l~~a~~~~---~~~~~~~Ll~~g~~~~~~------------------~~~~~~~~~~~~l~~-------~~~~~g~t~ 131 (161)
||||+|+..+ +.+++++|++.|++.... +...|+.+++++|+. .+|..|+||
T Consensus 237 t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~Tp 316 (373)
T 2fo1_E 237 TALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTP 316 (373)
T ss_dssp CHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCH
T ss_pred CHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCH
Confidence 9999999888 789999999999886531 466777788888873 567899999
Q ss_pred hHHHHHcCCHHHHHHHHhCCCCCCCCcC
Q 048100 132 LHEAVQSGSLDVVEILLGADPAFPYSAN 159 (161)
Q Consensus 132 l~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 159 (161)
||+|+..|+.+++++|+++|++++.++.
T Consensus 317 L~~A~~~g~~~iv~~Ll~~gad~~~~d~ 344 (373)
T 2fo1_E 317 IMLAAQEGRIEVVMYLIQQGASVEAVDA 344 (373)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSSCCCS
T ss_pred HHHHHHcCCHHHHHHHHHcCCCccCCCC
Confidence 9999999999999999999999887654
No 70
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.93 E-value=4.3e-25 Score=154.82 Aligned_cols=133 Identities=19% Similarity=0.201 Sum_probs=118.2
Q ss_pred ChHHHHHHHcCChHHHHHHHhh-hCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCc
Q 048100 2 NSDLYEAAAKGVIEPFNQLAID-RQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDS 80 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~-~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t 80 (161)
.||||.|+..|+.+.+++|++. +..++..+..|.||||+|+ ..++.. ...+++++|++.|.+ ++..+..|.|
T Consensus 149 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~---~~~~~~---~~~~i~~~Ll~~g~~-~~~~~~~g~t 221 (285)
T 1wdy_A 149 ATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHAL---LSSDDS---DVEAITHLLLDHGAD-VNVRGERGKT 221 (285)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHH---HCSCTT---THHHHHHHHHHTTCC-SSCCCTTSCC
T ss_pred CcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHH---Hccccc---hHHHHHHHHHHcCCC-CCCcCCCCCc
Confidence 3899999999999999999987 8889999999999999954 333211 137899999999987 5778999999
Q ss_pred HHHHHHHhCCHHHHHHHHH-hhhcCCchhhhcCchhHHHHHhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCCCCCCCc
Q 048100 81 PLHVAARYGHAAVVGALIE-FAEKQPGQELESGVKSTTRYMLGMKNDEEDTALHEAVQSGSLDVVEILLGADPAFPYSA 158 (161)
Q Consensus 81 ~l~~a~~~~~~~~~~~Ll~-~g~~~~~~~~~~~~~~~~~~l~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~ 158 (161)
|||+|+..|+.+++++|++ .|++ ++.+|..|+||||+|+..|+.+++++|+++|++++.++
T Consensus 222 ~L~~A~~~~~~~~v~~Ll~~~g~~-----------------~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~~d 283 (285)
T 1wdy_A 222 PLILAVEKKHLGLVQRLLEQEHIE-----------------INDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD 283 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHHSSSCC-----------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSS
T ss_pred HHHHHHHcCCHHHHHHHHhccCCC-----------------ccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCccc
Confidence 9999999999999999999 7887 77889999999999999999999999999999998765
No 71
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.93 E-value=6.5e-25 Score=152.55 Aligned_cols=134 Identities=16% Similarity=0.145 Sum_probs=110.5
Q ss_pred ChHHHHHHHcCChH----HHHHHHhhhCcccc----ccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchh-
Q 048100 2 NSDLYEAAAKGVIE----PFNQLAIDRQLGSL----VIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLL- 72 (161)
Q Consensus 2 ~~~l~~A~~~g~~~----~v~~ll~~~~~~~~----~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~- 72 (161)
.||||.|++.|+.+ .+++|+..+..++. .|..|.||||+|+.....| ..+++++|++.|++...
T Consensus 3 ~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g-------~~~~v~~Ll~~g~~~~~~ 75 (256)
T 2etb_A 3 RDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDG-------VNACIMPLLQIDKDSGNP 75 (256)
T ss_dssp HHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTT-------BCTTHHHHHHHHHHTTCS
T ss_pred ccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccc-------hHHHHHHHHhcCCcccch
Confidence 38999999999998 45666678888887 8999999999955431114 47899999998876421
Q ss_pred ---------ccCCCCCcHHHHHHHhCCHHHHHHHHHhhhcCCchhhhcCchhHHHHHhhccCCC-------------CCc
Q 048100 73 ---------QVNAKGDSPLHVAARYGHAAVVGALIEFAEKQPGQELESGVKSTTRYMLGMKNDE-------------EDT 130 (161)
Q Consensus 73 ---------~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~l~~~~~~~-------------g~t 130 (161)
..+..|.||||+|+..|+.+++++|++.|++ ++.++.. |.|
T Consensus 76 ~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-----------------~~~~~~~~~~~~~~~~~~~~g~t 138 (256)
T 2etb_A 76 KPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGAD-----------------VHLRACGRFFQKHQGTCFYFGEL 138 (256)
T ss_dssp SCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC-----------------TTCCCCSGGGSCCSSSCCCSCSS
T ss_pred hhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCC-----------------CCcccccccccccccccccCCCC
Confidence 1246799999999999999999999999998 5555554 999
Q ss_pred HhHHHHHcCCHHHHHHHHh---CCCCCCCCcC
Q 048100 131 ALHEAVQSGSLDVVEILLG---ADPAFPYSAN 159 (161)
Q Consensus 131 ~l~~a~~~~~~~~~~~Ll~---~~~~~~~~~~ 159 (161)
|||+|+..|+.+++++|++ .|++++.++.
T Consensus 139 pL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~ 170 (256)
T 2etb_A 139 PLSLAACTKQWDVVTYLLENPHQPASLEATDS 170 (256)
T ss_dssp HHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCT
T ss_pred HHHHHHHcCCHHHHHHHHhccccCCCcCccCC
Confidence 9999999999999999999 9999987654
No 72
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.93 E-value=2.6e-25 Score=158.43 Aligned_cols=127 Identities=20% Similarity=0.219 Sum_probs=113.2
Q ss_pred hHHHHHHHcCChHHHHHHHhhhCcccc------ccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCC
Q 048100 3 SDLYEAAAKGVIEPFNQLAIDRQLGSL------VIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNA 76 (161)
Q Consensus 3 ~~l~~A~~~g~~~~v~~ll~~~~~~~~------~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~ 76 (161)
++|+.|+..|+++.++.|+..+.+++. .+..|.||||+|+..+..+ ..+++++|++.|++ ++..|.
T Consensus 153 ~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~-------~~~iv~~Ll~~gad-vn~~d~ 224 (301)
T 2b0o_E 153 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQA-------SLPLVDFIIQNGGH-LDAKAA 224 (301)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTT-------THHHHHHHHHHSSC-TTCCCT
T ss_pred HHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccC-------cHHHHHHHHhcCCC-CCCCCC
Confidence 569999999999999999999888877 6889999999965432123 48999999999987 577899
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHhhhcCCchhhhcCchhHHHHHhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCCCC
Q 048100 77 KGDSPLHVAARYGHAAVVGALIEFAEKQPGQELESGVKSTTRYMLGMKNDEEDTALHEAVQSGSLDVVEILLGADPAF 154 (161)
Q Consensus 77 ~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~l~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~ 154 (161)
.|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|++.
T Consensus 225 ~G~TpLh~A~~~g~~~~v~~Ll~~gad-----------------~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~~ 285 (301)
T 2b0o_E 225 DGNTALHYAALYNQPDCLKLLLKGRAL-----------------VGTVNEAGETALDIARKKHHKECEELLEQAQAGT 285 (301)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCC-----------------CSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCC-----------------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCC
Confidence 999999999999999999999999998 7788999999999999999999999999887763
No 73
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.93 E-value=1.9e-26 Score=153.79 Aligned_cols=135 Identities=10% Similarity=-0.008 Sum_probs=85.6
Q ss_pred hHHHHHHHcCCh----HHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCC
Q 048100 3 SDLYEAAAKGVI----EPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKG 78 (161)
Q Consensus 3 ~~l~~A~~~g~~----~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~ 78 (161)
||||.|+..|+. +++++|++.+.+++.+|..|.||||+|+.. ++.. .....+++++|+++|++ ++.+|..|
T Consensus 40 T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~---~~~~-~~~~~~iv~~Ll~~Gad-in~~d~~g 114 (186)
T 3t8k_A 40 NILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQG---GGND-ITGTTELCKIFLEKGAD-ITALYKPY 114 (186)
T ss_dssp THHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHH---CTTC-HHHHHHHHHHHHHTTCC-SSSCBGGG
T ss_pred CHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHc---CCcc-hhhHHHHHHHHHHCCCC-CCccCCCc
Confidence 566666666653 356666666666666666666666664322 2100 00124566666666665 35556666
Q ss_pred C-cHHHHHHHhC-----CHHHHHHHHH-hhhcCCchhhhcCchhHHHHHhhccCCCCCcHhHHHHHcCCHHHHHHHHhCC
Q 048100 79 D-SPLHVAARYG-----HAAVVGALIE-FAEKQPGQELESGVKSTTRYMLGMKNDEEDTALHEAVQSGSLDVVEILLGAD 151 (161)
Q Consensus 79 ~-t~l~~a~~~~-----~~~~~~~Ll~-~g~~~~~~~~~~~~~~~~~~l~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~ 151 (161)
. ||||+|+..+ ..+++++|++ +|++ ++.+|..|+||||+|++.|+.+++++|.++.
T Consensus 115 ~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad-----------------~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~ 177 (186)
T 3t8k_A 115 KIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQ-----------------LLIKDKWGLTALEFVKRCQKPIALKMMEDYI 177 (186)
T ss_dssp TBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCC-----------------TTCCCTTSCCHHHHHHTTTCHHHHHHHHHHH
T ss_pred CchHHHHHHHcCCChhhHHHHHHHHHHhcCCC-----------------CcccCCCCCCHHHHHHHcCCHHHHHHHHHHH
Confidence 6 6666666632 2346666666 6666 6778999999999999999999999999766
Q ss_pred CCCCCCcC
Q 048100 152 PAFPYSAN 159 (161)
Q Consensus 152 ~~~~~~~~ 159 (161)
.+.+..+|
T Consensus 178 ~~~~~~~~ 185 (186)
T 3t8k_A 178 KKYNLKEN 185 (186)
T ss_dssp HHHTCCC-
T ss_pred HHHhcccC
Confidence 55554443
No 74
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.93 E-value=4.9e-25 Score=151.50 Aligned_cols=125 Identities=14% Similarity=0.175 Sum_probs=102.8
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCc------cccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccC
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQL------GSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVN 75 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~------~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~ 75 (161)
.||||.|+..|+.+.++.|++.+.. .+..+..|.||||+| +..+ ..+++++|++.|++ ++..+
T Consensus 79 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A---~~~~-------~~~~v~~Ll~~g~~-~~~~~ 147 (236)
T 1ikn_D 79 NTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLA---SIHG-------YLGIVELLVSLGAD-VNAQE 147 (236)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHH---HHTT-------CHHHHHHHHHHTCC-TTCCC
T ss_pred CCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHH---HHcC-------CHHHHHHHHHcCCC-CCCCC
Confidence 5899999999999999999987654 466788899999995 4555 48999999999988 45666
Q ss_pred C-CCCcHHHHHHHhCCHHHHHHHHHhhhcCCch----------hhhcCchhHHHHHhh--------ccCCCCCcHhHHHH
Q 048100 76 A-KGDSPLHVAARYGHAAVVGALIEFAEKQPGQ----------ELESGVKSTTRYMLG--------MKNDEEDTALHEAV 136 (161)
Q Consensus 76 ~-~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~----------~~~~~~~~~~~~l~~--------~~~~~g~t~l~~a~ 136 (161)
. .|.||||+|+..|+.+++++|+++|++.... +...++.+++++|+. .++..|.||...+.
T Consensus 148 ~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~ 227 (236)
T 1ikn_D 148 PCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTES 227 (236)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCCCCC-
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccchHHHHhhhc
Confidence 6 9999999999999999999999999987655 456777888999873 56778888876544
Q ss_pred H
Q 048100 137 Q 137 (161)
Q Consensus 137 ~ 137 (161)
.
T Consensus 228 ~ 228 (236)
T 1ikn_D 228 E 228 (236)
T ss_dssp -
T ss_pred c
Confidence 3
No 75
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.93 E-value=1.5e-24 Score=156.26 Aligned_cols=129 Identities=24% Similarity=0.281 Sum_probs=116.4
Q ss_pred ChHHHHHHHcCChHHHHHHHhh-hCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCc
Q 048100 2 NSDLYEAAAKGVIEPFNQLAID-RQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDS 80 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~-~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t 80 (161)
.++|+.|++.|+.+.++.++.. +...+..|..|.||||+| +..| +.+++++|++.|++ ++..+..|.|
T Consensus 25 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A---~~~g-------~~~~v~~Ll~~g~~-~~~~~~~g~t 93 (351)
T 3utm_A 25 KDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLA---AGYN-------RVRIVQLLLQHGAD-VHAKDKGGLV 93 (351)
T ss_dssp HHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHH---HHTT-------CHHHHHHHHHTTCC-TTCCCTTCCC
T ss_pred chhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHH---HHcC-------CHHHHHHHHHcCCC-CCccCCCCCc
Confidence 4789999999999999999865 677788999999999995 4555 48999999999987 5778999999
Q ss_pred HHHHHHHhCCHHHHHHHHHhhhcCCchhhhcCchhHHHHHhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCCCCCCCc
Q 048100 81 PLHVAARYGHAAVVGALIEFAEKQPGQELESGVKSTTRYMLGMKNDEEDTALHEAVQSGSLDVVEILLGADPAFPYSA 158 (161)
Q Consensus 81 ~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~l~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~ 158 (161)
|||+|+..|+.+++++|+++|++ ++..|..|.||||+|+..|+.+++++|+++|++++..+
T Consensus 94 ~L~~A~~~g~~~iv~~Ll~~g~~-----------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 154 (351)
T 3utm_A 94 PLHNACSYGHYEVTELLLKHGAC-----------------VNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVN 154 (351)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCC-----------------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHHHHHCCCHHHHHHHHHCCCC-----------------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccc
Confidence 99999999999999999999988 77789999999999999999999999999999987654
No 76
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.93 E-value=3.4e-25 Score=161.13 Aligned_cols=126 Identities=20% Similarity=0.207 Sum_probs=115.5
Q ss_pred ChHHHHHHHcC--ChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccc----hhccC
Q 048100 2 NSDLYEAAAKG--VIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSL----LLQVN 75 (161)
Q Consensus 2 ~~~l~~A~~~g--~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~----~~~~~ 75 (161)
.||||.|+..| +.+.++.|++.+.+++..|..|.||||+| +..| +.+++++|++.+++. ++..+
T Consensus 139 ~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A---~~~g-------~~~~v~~Ll~~g~~~~~~~~~~~~ 208 (364)
T 3ljn_A 139 QTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRA---MEFR-------NREALDLMMDTVPSKSSLRLDYAN 208 (364)
T ss_dssp CCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHH---HHTT-------CHHHHHHHHHHCSCSSSCCTTCCC
T ss_pred CCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHH---HHcC-------CHHHHHHHHhcccccccccccccC
Confidence 58999999999 99999999999999999999999999994 4555 489999999998762 46778
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHHhhhcCCchhhhcCchhHHHHHhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCCCC
Q 048100 76 AKGDSPLHVAARYGHAAVVGALIEFAEKQPGQELESGVKSTTRYMLGMKNDEEDTALHEAVQSGSLDVVEILLGADPAF 154 (161)
Q Consensus 76 ~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~l~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~ 154 (161)
..|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|+++
T Consensus 209 ~~g~t~L~~A~~~g~~~~v~~Ll~~gad-----------------~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~ 270 (364)
T 3ljn_A 209 KQGNSHLHWAILINWEDVAMRFVEMGID-----------------VNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVF 270 (364)
T ss_dssp TTCCCTTHHHHTTTCHHHHHHHHTTTCC-----------------TTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCC-----------------CCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCch
Confidence 9999999999999999999999999998 7888999999999999999999999999988764
No 77
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.93 E-value=1.1e-24 Score=153.60 Aligned_cols=127 Identities=19% Similarity=0.148 Sum_probs=111.5
Q ss_pred hHHHHHHHcCChHHHHHHHhhhCcc------ccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCC
Q 048100 3 SDLYEAAAKGVIEPFNQLAIDRQLG------SLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNA 76 (161)
Q Consensus 3 ~~l~~A~~~g~~~~v~~ll~~~~~~------~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~ 76 (161)
++|+.|+..|+++.++.++..+... +..+..|.||||+|+..+..+ ..+++++|+++|++ ++..|.
T Consensus 132 ~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~-------~~~~v~~Ll~~ga~-in~~d~ 203 (278)
T 1dcq_A 132 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRT-------SLHIVDFLVQNSGN-LDKQTG 203 (278)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTT-------THHHHHHHHHHCSC-TTCCCT
T ss_pred hhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccc-------hHHHHHHHHHCCCC-ccccCC
Confidence 5789999999999999999888774 334788999999965432113 48999999999988 578899
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHhhhcCCchhhhcCchhHHHHHhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCCCC
Q 048100 77 KGDSPLHVAARYGHAAVVGALIEFAEKQPGQELESGVKSTTRYMLGMKNDEEDTALHEAVQSGSLDVVEILLGADPAF 154 (161)
Q Consensus 77 ~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~l~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~ 154 (161)
.|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|++.
T Consensus 204 ~g~TpLh~A~~~g~~~~v~~Ll~~gad-----------------~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 204 KGSTALHYCCLTDNAECLKLLLRGKAS-----------------IEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCC-----------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCC-----------------CCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999999999999999999999999998 8889999999999999999999999999887753
No 78
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.93 E-value=2.4e-24 Score=147.66 Aligned_cols=147 Identities=18% Similarity=0.200 Sum_probs=119.0
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcH
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSP 81 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 81 (161)
.++|+.|++.|+++.+++|++.+...+..+..|.||||+| +..| +.+++++|++.++++....+..|.||
T Consensus 10 ~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A---~~~~-------~~~~v~~Ll~~~~~~~~~~~~~~~t~ 79 (240)
T 3eu9_A 10 TWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWA---AINN-------RIDLVKYYISKGAIVDQLGGDLNSTP 79 (240)
T ss_dssp GCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH---HHTT-------CHHHHHHHHHTTCCTTCCBTTTTBCH
T ss_pred chHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHH---HHhC-------CHHHHHHHHHcCCcchhhcCCcCCCh
Confidence 4789999999999999999999999999999999999995 4455 48999999999988666667779999
Q ss_pred HHHHHHhCCHHHHHHHHHhhhcCCch----------hhhcCchhHHHHHh------hccCCCCCcHhHHHHHcCC-HHHH
Q 048100 82 LHVAARYGHAAVVGALIEFAEKQPGQ----------ELESGVKSTTRYML------GMKNDEEDTALHEAVQSGS-LDVV 144 (161)
Q Consensus 82 l~~a~~~~~~~~~~~Ll~~g~~~~~~----------~~~~~~~~~~~~l~------~~~~~~g~t~l~~a~~~~~-~~~~ 144 (161)
||+|+..|+.+++++|++.|++.... +...|+.+++++|+ +.++..|.||||+|+..++ .+++
T Consensus 80 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~ 159 (240)
T 3eu9_A 80 LHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPT 159 (240)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTH
T ss_pred hHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHH
Confidence 99999999999999999999885443 34556666777765 3466677777777775554 6777
Q ss_pred HHHHhCCCCCCCCc
Q 048100 145 EILLGADPAFPYSA 158 (161)
Q Consensus 145 ~~Ll~~~~~~~~~~ 158 (161)
++|++.|++++..+
T Consensus 160 ~~L~~~~~~~~~~~ 173 (240)
T 3eu9_A 160 RLLLTFNVSVNLGD 173 (240)
T ss_dssp HHHHHTTCCTTCCC
T ss_pred HHHHhcCCCcchhh
Confidence 77777777776554
No 79
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.92 E-value=2.3e-24 Score=155.23 Aligned_cols=140 Identities=19% Similarity=0.134 Sum_probs=99.9
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccC-CCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccc----------
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIH-KKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSL---------- 70 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~-~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~---------- 70 (161)
+|+|+.|++.|+++.|+.|++.+.+++.++. .|.||||+| +..| +.+++++|+++|+++
T Consensus 26 ~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A---~~~g-------~~~iv~~Ll~~ga~~~~~~~~~~~~ 95 (337)
T 4g8k_A 26 NHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNA---VQMS-------REDIVELLLRHGADPVLRKKNGATP 95 (337)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHH---HHTT-------CHHHHHHHHHTTCCTTCCCTTCCCH
T ss_pred ChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHH---HHcC-------CHHHHHHHHHcCCchhhhccCCCch
Confidence 4789999999999999999999999998876 599999995 4555 489999999988753
Q ss_pred ----------------------hhccCCCCCcHHHHHHHhCCHHHHHHHHHhhhcCCchhhhcCchhHHHHHhhccCCCC
Q 048100 71 ----------------------LLQVNAKGDSPLHVAARYGHAAVVGALIEFAEKQPGQELESGVKSTTRYMLGMKNDEE 128 (161)
Q Consensus 71 ----------------------~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~l~~~~~~~g 128 (161)
++..+..|.||+|+|+..|+.+++++|++.|++...... .. ......+..|
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~-~~------~~~~~~~~~g 168 (337)
T 4g8k_A 96 FILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRK-TK------EDQERLRKGG 168 (337)
T ss_dssp HHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCC-CC-----------CTTCS
T ss_pred hHHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhc-cc------cccccccCCC
Confidence 233467788888888888888888888888877443200 00 0012234556
Q ss_pred CcHhHHHHHcCCHHHHHHHHh-CCCCCCCCc
Q 048100 129 DTALHEAVQSGSLDVVEILLG-ADPAFPYSA 158 (161)
Q Consensus 129 ~t~l~~a~~~~~~~~~~~Ll~-~~~~~~~~~ 158 (161)
.||||+|+..|+.+++++|++ .|++++.++
T Consensus 169 ~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d 199 (337)
T 4g8k_A 169 ATALMDAAEKGHVEVLKILLDEMGADVNACD 199 (337)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHSCCCTTCCC
T ss_pred CcHHHHHHHCCCHHHHHHHHhccCCCcCccC
Confidence 666666666666666666663 466665443
No 80
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.92 E-value=2.1e-25 Score=155.33 Aligned_cols=134 Identities=13% Similarity=0.151 Sum_probs=110.3
Q ss_pred ChHHHHHHHcCChHHHHHHHh----hhCcccccc----CCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccc---
Q 048100 2 NSDLYEAAAKGVIEPFNQLAI----DRQLGSLVI----HKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSL--- 70 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~----~~~~~~~~~----~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~--- 70 (161)
.++||.|++.|+.+.++.|++ .+...+..+ ..|.||||+|+.++..|+ .+++++|++.+++.
T Consensus 6 ~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~-------~~~v~~Ll~~g~~~~~~ 78 (260)
T 3jxi_A 6 RPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGR-------NDTIPILLDIAEKTGNM 78 (260)
T ss_dssp HHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTB-------CTHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCC-------HHHHHHHHHhcccccch
Confidence 378999999999997666554 777777665 679999999764435554 78999999987542
Q ss_pred -------hhccCCCCCcHHHHHHHhCCHHHHHHHHHhhhcCCchhhhcCchhHHHHHhhccC--------------CCCC
Q 048100 71 -------LLQVNAKGDSPLHVAARYGHAAVVGALIEFAEKQPGQELESGVKSTTRYMLGMKN--------------DEED 129 (161)
Q Consensus 71 -------~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~l~~~~~--------------~~g~ 129 (161)
....+..|+||||+|+..|+.+++++|++.|++ ++.++ ..|+
T Consensus 79 ~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-----------------~~~~~~~~~~~~~~~~~~~~~g~ 141 (260)
T 3jxi_A 79 REFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGAD-----------------VHAQARGRFFQPKDEGGYFYFGE 141 (260)
T ss_dssp HHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCC-----------------TTCCCEECCCSSSCCCCSCCSCS
T ss_pred HhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCC-----------------cCccccccccCcccccccccCCC
Confidence 123355899999999999999999999999998 55555 6899
Q ss_pred cHhHHHHHcCCHHHHHHHHh---CCCCCCCCcC
Q 048100 130 TALHEAVQSGSLDVVEILLG---ADPAFPYSAN 159 (161)
Q Consensus 130 t~l~~a~~~~~~~~~~~Ll~---~~~~~~~~~~ 159 (161)
||||+|+..|+.+++++|++ .|++++.++.
T Consensus 142 tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~ 174 (260)
T 3jxi_A 142 LPLSLAACTNQPHIVHYLTENGHKQADLRRQDS 174 (260)
T ss_dssp SHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCT
T ss_pred CHHHHHHHcCCHHHHHHHHhccccCCCCcccCC
Confidence 99999999999999999999 9999987654
No 81
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.92 E-value=1.7e-24 Score=143.74 Aligned_cols=136 Identities=23% Similarity=0.204 Sum_probs=101.7
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccC-CCCCc
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVN-AKGDS 80 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~-~~~~t 80 (161)
.||||.|+..|+.+.++.|++ +..++..|..|.||||+|+ ..| +.+++++|++.|+++ +..+ ..|+|
T Consensus 45 ~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~---~~~-------~~~~v~~Ll~~ga~~-~~~~~~~g~t 112 (183)
T 3deo_A 45 ETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVA---GLG-------SDKCVRLLAEAGADL-DHRDMRGGLT 112 (183)
T ss_dssp HHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHH---HHT-------CHHHHHHHHHTTCCT-TCCCSSSSCC
T ss_pred CCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHH---HcC-------CHHHHHHHHHcCCCC-CcCCCCCCCC
Confidence 489999999999999999998 8889999999999999954 445 489999999999884 5555 89999
Q ss_pred HHHHHHHhCCHHHHHHHHHhhhcCCchhhhcCchhHHHHHhhccCCCCCcHhHHHHHcCCHHHHHHHHhC
Q 048100 81 PLHVAARYGHAAVVGALIEFAEKQPGQELESGVKSTTRYMLGMKNDEEDTALHEAVQSGSLDVVEILLGA 150 (161)
Q Consensus 81 ~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~l~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ 150 (161)
|||+|+..|+.+++++|+++|++.... +..|..++.-.........+.+++++|+..|+.+++++|.+.
T Consensus 113 pL~~A~~~~~~~~v~~Ll~~ga~~~~~-d~~g~tpl~~A~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 113 ALHMAAGYVRPEVVEALVELGADIEVE-DERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTCCTTCC-CTTSCCHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHhcCcHHHHHHHHHcCCCCcCC-CCCCCCHHHHHHHhccCcccccHHHHHHHcCHHHHHHHHHHh
Confidence 999999999999999999999984333 233333322111112223334444444555778888887653
No 82
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.92 E-value=1.1e-23 Score=144.42 Aligned_cols=147 Identities=21% Similarity=0.214 Sum_probs=117.8
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCcccccc-CCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCc
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVI-HKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDS 80 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~-~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t 80 (161)
.||||.|+..|+.+.+++|++.+...+..+ ..|.||||+|+ ..+ ..+++++|++.+++ ++..+..|.|
T Consensus 43 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~---~~~-------~~~~v~~Ll~~g~~-~~~~~~~g~t 111 (240)
T 3eu9_A 43 VTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWAT---RQG-------HLSMVVQLMKYGAD-PSLIDGEGCS 111 (240)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHH---HHT-------CHHHHHHHHHTTCC-TTCCCTTSCC
T ss_pred CCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHH---HcC-------CHHHHHHHHHcCCC-CcccCCCCCC
Confidence 479999999999999999999888776544 45999999954 444 48899999999887 4677899999
Q ss_pred HHHHHHHhCCHHHHHHHHHhhhcCCch----------hhhcCc-hhHHHHHh------hccCC-CCCcHhHHHHHcCCHH
Q 048100 81 PLHVAARYGHAAVVGALIEFAEKQPGQ----------ELESGV-KSTTRYML------GMKND-EEDTALHEAVQSGSLD 142 (161)
Q Consensus 81 ~l~~a~~~~~~~~~~~Ll~~g~~~~~~----------~~~~~~-~~~~~~l~------~~~~~-~g~t~l~~a~~~~~~~ 142 (161)
|||+|+..|+.+++++|++.|++.... +...+. ..+.++++ +..+. .|.||||+|+..|+.+
T Consensus 112 ~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 191 (240)
T 3eu9_A 112 CIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTT 191 (240)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHH
T ss_pred HHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHH
Confidence 999999999999999999999886554 121222 44566664 34554 8899999999999999
Q ss_pred HHHHHHhCCCCCCCCcC
Q 048100 143 VVEILLGADPAFPYSAN 159 (161)
Q Consensus 143 ~~~~Ll~~~~~~~~~~~ 159 (161)
++++|++.|++++..+.
T Consensus 192 ~v~~Ll~~g~~~~~~~~ 208 (240)
T 3eu9_A 192 VISLLLEAGANVDAQNI 208 (240)
T ss_dssp HHHHHHHHTCCTTCBCT
T ss_pred HHHHHHHcCCCCCCcCC
Confidence 99999999998876543
No 83
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.91 E-value=1.5e-24 Score=152.11 Aligned_cols=126 Identities=18% Similarity=0.215 Sum_probs=109.1
Q ss_pred ChHHHHHHHc---CChHHHHHHHhhhCcc-------c----cccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhC
Q 048100 2 NSDLYEAAAK---GVIEPFNQLAIDRQLG-------S----LVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETC 67 (161)
Q Consensus 2 ~~~l~~A~~~---g~~~~v~~ll~~~~~~-------~----~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~ 67 (161)
.||||.|+.. |+.+.++.|++.+... + ..|..|.||||+| +..| +.+++++|++.|
T Consensus 55 ~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A---~~~g-------~~~~v~~Ll~~g 124 (273)
T 2pnn_A 55 KTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIA---IERR-------NMTLVTLLVENG 124 (273)
T ss_dssp CCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHH---HHTT-------CHHHHHHHHHTT
T ss_pred CCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHH---HHcC-------CHHHHHHHHHCC
Confidence 5899999987 9999999999887542 2 2566899999995 4555 489999999999
Q ss_pred ccchhccCC--------------CCCcHHHHHHHhCCHHHHHHHHH---hhhcCCchhhhcCchhHHHHHhhccCCCCCc
Q 048100 68 PSLLLQVNA--------------KGDSPLHVAARYGHAAVVGALIE---FAEKQPGQELESGVKSTTRYMLGMKNDEEDT 130 (161)
Q Consensus 68 ~~~~~~~~~--------------~~~t~l~~a~~~~~~~~~~~Ll~---~g~~~~~~~~~~~~~~~~~~l~~~~~~~g~t 130 (161)
++ ++..+. .|.||||+|+..|+.+++++|++ .|++ ++.+|..|+|
T Consensus 125 a~-~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad-----------------~~~~d~~g~t 186 (273)
T 2pnn_A 125 AD-VQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPAD-----------------ISARDSVGNT 186 (273)
T ss_dssp CC-TTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCC-----------------TTCCCTTSCC
T ss_pred CC-cCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCC-----------------ceeeCCCCCc
Confidence 88 455555 79999999999999999999999 8888 7888999999
Q ss_pred HhHHHHHcCC---------HHHHHHHHhCCCCCC
Q 048100 131 ALHEAVQSGS---------LDVVEILLGADPAFP 155 (161)
Q Consensus 131 ~l~~a~~~~~---------~~~~~~Ll~~~~~~~ 155 (161)
|||+|+..|+ .+++++|+++|++++
T Consensus 187 pLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n 220 (273)
T 2pnn_A 187 VLHALVEVADNTVDNTKFVTSMYNEILILGAKLH 220 (273)
T ss_dssp HHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcc
Confidence 9999999998 899999999988875
No 84
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.91 E-value=5.5e-24 Score=147.32 Aligned_cols=137 Identities=23% Similarity=0.196 Sum_probs=112.7
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccC-CCCCc
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVN-AKGDS 80 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~-~~~~t 80 (161)
.||||.|++.|+.+.++.|++ +..++.+|..|.||||+|+ ..| +.+++++|++.|+++ +..+ ..|+|
T Consensus 46 ~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~---~~g-------~~~~v~~Ll~~ga~~-~~~~~~~g~t 113 (244)
T 3ui2_A 46 ETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVA---GLG-------SDKCVRLLAEAGADL-DHRDMRGGLT 113 (244)
T ss_dssp HHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHH---HHT-------CHHHHHHHHHTTCCT-TCCCSSSCCC
T ss_pred CCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHH---HCC-------CHHHHHHHHHcCCCC-CcCCCCCCCC
Confidence 489999999999999999998 8889999999999999954 445 489999999999984 4555 88999
Q ss_pred HHHHHHHhCCHHHHHHHHHhhhcCCchhhhcCchhHHHHHhhccCCCCCcHhHHHHHcCCHHHHHHHHhCC
Q 048100 81 PLHVAARYGHAAVVGALIEFAEKQPGQELESGVKSTTRYMLGMKNDEEDTALHEAVQSGSLDVVEILLGAD 151 (161)
Q Consensus 81 ~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~l~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~ 151 (161)
|||+|+..|+.+++++|+++|++.+.. +..|..++.-.........+.|||++|+..|+.+++++|++.+
T Consensus 114 ~L~~A~~~g~~~~v~~Ll~~ga~~~~~-d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~~~ 183 (244)
T 3ui2_A 114 ALHMAAGYVRPEVVEALVELGADIEVE-DERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQV 183 (244)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTCCCHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCC-CCCCCcHHHHHHHHHhccCCCCHHHHHHHcChHHHHHHHHHhc
Confidence 999999999999999999999986554 4555555443333344556677777777899999999999753
No 85
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.91 E-value=7.1e-24 Score=125.97 Aligned_cols=93 Identities=33% Similarity=0.506 Sum_probs=83.7
Q ss_pred CCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcHHHHHHHhCCHHHHHHHHHhhhcCCchhhhcC
Q 048100 33 KKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSPLHVAARYGHAAVVGALIEFAEKQPGQELESG 112 (161)
Q Consensus 33 ~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~ 112 (161)
.|.||||+| +..+ ..+++++|++.+++ ++..+..|+||||+|+..++.+++++|++.|++
T Consensus 1 ~g~t~L~~A---~~~~-------~~~~v~~Ll~~g~~-~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~--------- 60 (93)
T 1n0q_A 1 NGRTPLHLA---ARNG-------HLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD--------- 60 (93)
T ss_dssp --CCHHHHH---HHHT-------CHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---------
T ss_pred CCCcHHHHH---HHcC-------CHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---------
Confidence 489999995 4445 48999999999987 578899999999999999999999999999998
Q ss_pred chhHHHHHhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCCC
Q 048100 113 VKSTTRYMLGMKNDEEDTALHEAVQSGSLDVVEILLGADPA 153 (161)
Q Consensus 113 ~~~~~~~l~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~ 153 (161)
++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 61 --------~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 61 --------VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp --------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred --------CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 788899999999999999999999999999975
No 86
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.91 E-value=4.4e-24 Score=155.66 Aligned_cols=123 Identities=20% Similarity=0.264 Sum_probs=112.4
Q ss_pred ChHHHHHHHc-CChHHHHHHHhhhCcccccc--CCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCC
Q 048100 2 NSDLYEAAAK-GVIEPFNQLAIDRQLGSLVI--HKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKG 78 (161)
Q Consensus 2 ~~~l~~A~~~-g~~~~v~~ll~~~~~~~~~~--~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~ 78 (161)
+++||.|+.. |+++.++.|+..+.+++..+ ..|.||||+| +..+ ..+++++|++.|++ ++..|..|
T Consensus 200 ~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~A---a~~g-------~~~iv~~LL~~Gad-vn~~d~~G 268 (368)
T 3jue_A 200 GALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQA---TAAN-------SLLACEFLLQNGAN-VNQADSAG 268 (368)
T ss_dssp HHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHH---HHTT-------CHHHHHHHHHTTCC-TTCCCTTS
T ss_pred CcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHH---HHCC-------CHHHHHHHHHcCCC-CCCCCCCC
Confidence 3689999999 99999999999999999888 8999999995 4555 48999999999988 57889999
Q ss_pred CcHHHHHHHhCCHHHHHHHHHhhhcCCchhhhcCchhHHHHHhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCC
Q 048100 79 DSPLHVAARYGHAAVVGALIEFAEKQPGQELESGVKSTTRYMLGMKNDEEDTALHEAVQSGSLDVVEILLGADP 152 (161)
Q Consensus 79 ~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~l~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~ 152 (161)
+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..++.+++++|+.++.
T Consensus 269 ~TpLh~A~~~g~~~~v~~LL~~Gad-----------------~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~ 325 (368)
T 3jue_A 269 RGPLHHATILGHTGLACLFLKRGAD-----------------LGARDSEGRDPLTIAMETANADIVTLLRLAKM 325 (368)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCC-----------------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC
T ss_pred CCHHHHHHHcCcHHHHHHHHHCcCC-----------------CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCC
Confidence 9999999999999999999999998 78889999999999999999999999996653
No 87
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.91 E-value=1.4e-24 Score=144.64 Aligned_cols=132 Identities=11% Similarity=0.065 Sum_probs=109.9
Q ss_pred hHHHHHHHcCChHHHHHHHhhhCcccccc-CCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcH
Q 048100 3 SDLYEAAAKGVIEPFNQLAIDRQLGSLVI-HKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSP 81 (161)
Q Consensus 3 ~~l~~A~~~g~~~~v~~ll~~~~~~~~~~-~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 81 (161)
++|+.|++.|+++.++.++..+ .+..+ ..|.||||+ |+..++.. .+.+++++|+++|++ ++..+..|+||
T Consensus 8 ~~l~~Aa~~g~~~~~~~l~~~~--~~~~~~~~g~T~Lh~---A~~~~~~~---~~~~iv~~Ll~~Gad-vn~~d~~g~Tp 78 (186)
T 3t8k_A 8 RTVSAAAMLGTYEDFLELFEKG--YEDKESVLKSNILYD---VLRNNNDE---ARYKISMFLINKGAD-IKSRTKEGTTL 78 (186)
T ss_dssp SSHHHHHHHSCHHHHHHHHHHS--SSCHHHHHTTTHHHH---HTTCSCHH---HHHHHHHHHHHTTCC-SSCCCTTCCCT
T ss_pred cHHHHHHHcCCHHHHHHHHhcC--cccccccCCCCHHHH---HHHcCCcc---hHHHHHHHHHHCCCC-CCCCCCCCCcH
Confidence 6799999999999999998654 34455 789999999 44444311 135799999999998 57889999999
Q ss_pred HHHHHHhCC------HHHHHHHHHhhhcCCchhhhcCchhHHHHHhhccCCCCC-cHhHHHHHcC-----CHHHHHHHHh
Q 048100 82 LHVAARYGH------AAVVGALIEFAEKQPGQELESGVKSTTRYMLGMKNDEED-TALHEAVQSG-----SLDVVEILLG 149 (161)
Q Consensus 82 l~~a~~~~~------~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~l~~~~~~~g~-t~l~~a~~~~-----~~~~~~~Ll~ 149 (161)
||+|+..++ .+++++|+++|++ ++.+|..|+ ||||+|+..+ +.+++++|++
T Consensus 79 Lh~a~~~~~~~~~~~~~iv~~Ll~~Gad-----------------in~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~ 141 (186)
T 3t8k_A 79 FFPLFQGGGNDITGTTELCKIFLEKGAD-----------------ITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFS 141 (186)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTTCC-----------------SSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHT
T ss_pred HHHHHHcCCcchhhHHHHHHHHHHCCCC-----------------CCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHH
Confidence 999999987 5789999999999 888899999 9999999944 4679999999
Q ss_pred -CCCCCCCCcCC
Q 048100 150 -ADPAFPYSANG 160 (161)
Q Consensus 150 -~~~~~~~~~~~ 160 (161)
+|++++.+++.
T Consensus 142 ~~gad~~~~d~~ 153 (186)
T 3t8k_A 142 QSGLQLLIKDKW 153 (186)
T ss_dssp STTCCTTCCCTT
T ss_pred hcCCCCcccCCC
Confidence 99999877653
No 88
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.91 E-value=9.9e-24 Score=154.19 Aligned_cols=126 Identities=19% Similarity=0.172 Sum_probs=109.8
Q ss_pred ChHHHHHHHcC---ChHHHHHHHhhhCcccc--------ccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccc
Q 048100 2 NSDLYEAAAKG---VIEPFNQLAIDRQLGSL--------VIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSL 70 (161)
Q Consensus 2 ~~~l~~A~~~g---~~~~v~~ll~~~~~~~~--------~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~ 70 (161)
.||||.|+..+ +.+.++.|++.+..++. .+..|.||||+ |+..| ..+++++|++.+...
T Consensus 236 ~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~---A~~~g-------~~~~v~~Ll~~~~~~ 305 (373)
T 2fo1_E 236 MTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHY---AAQVS-------NMPIVKYLVGEKGSN 305 (373)
T ss_dssp CCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHH---HHSSC-------CHHHHHHHHHHSCCC
T ss_pred CCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHH---HHHhC-------CHHHHHHHHHhcCCC
Confidence 47899999988 88999999988877765 56789999999 55555 489999999987444
Q ss_pred hhccCCCCCcHHHHHHHhCCHHHHHHHHHhhhcCCchhhhcCchhHHHHHhhccCCCCCcHhHHHHHcCCHHHHHHHHhC
Q 048100 71 LLQVNAKGDSPLHVAARYGHAAVVGALIEFAEKQPGQELESGVKSTTRYMLGMKNDEEDTALHEAVQSGSLDVVEILLGA 150 (161)
Q Consensus 71 ~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~l~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ 150 (161)
++..|..|.||||+|+..|+.+++++|+++|++ ++.+|..|.|||++|+..|+.+++++|+++
T Consensus 306 ~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad-----------------~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~ 368 (373)
T 2fo1_E 306 KDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGAS-----------------VEAVDATDHTARQLAQANNHHNIVDIFDRC 368 (373)
T ss_dssp TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-----------------SSCCCSSSCCHHHHHHHTTCHHHHHHHHTT
T ss_pred ccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----------------ccCCCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 788899999999999999999999999999998 788899999999999999999999999999
Q ss_pred CCCC
Q 048100 151 DPAF 154 (161)
Q Consensus 151 ~~~~ 154 (161)
+++-
T Consensus 369 ~a~~ 372 (373)
T 2fo1_E 369 RPER 372 (373)
T ss_dssp C---
T ss_pred Cccc
Confidence 8863
No 89
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.91 E-value=3.4e-24 Score=150.85 Aligned_cols=122 Identities=18% Similarity=0.231 Sum_probs=111.1
Q ss_pred ChHHHHHH-----HcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCC
Q 048100 2 NSDLYEAA-----AKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNA 76 (161)
Q Consensus 2 ~~~l~~A~-----~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~ 76 (161)
.||||.|+ ..++.+.++.|++.+...+..+..|.||||+| +..| ..+++++|++.|++ ++..|.
T Consensus 146 ~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A---~~~g-------~~~~v~~Ll~~gad-~n~~d~ 214 (276)
T 4hbd_A 146 YSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLA---VSHG-------RVDVVKALLACEAD-VNVQDD 214 (276)
T ss_dssp CCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHH---HHTT-------CHHHHHHHHHTTCC-TTCCCT
T ss_pred CCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHH---HHcC-------CHHHHHHHHhCCCC-CCCCCC
Confidence 48999999 67899999999999988888999999999995 4555 48999999999998 578899
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHH-hhhcCCchhhhcCchhHHHHHhhccCCCCCcHhHHHHHcCCHHHHHHHHhCC
Q 048100 77 KGDSPLHVAARYGHAAVVGALIE-FAEKQPGQELESGVKSTTRYMLGMKNDEEDTALHEAVQSGSLDVVEILLGAD 151 (161)
Q Consensus 77 ~~~t~l~~a~~~~~~~~~~~Ll~-~g~~~~~~~~~~~~~~~~~~l~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~ 151 (161)
.|+||||+|+..|+.+++++|++ .|++ ++.+|..|+||||+|+..|+.+++++|+++.
T Consensus 215 ~G~TpLh~A~~~g~~~iv~~Ll~~~gad-----------------~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 215 DGSTALMCACEHGHKEIAGLLLAVPSCD-----------------ISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHTSTTCC-----------------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred CCCCHHHHHHHCCCHHHHHHHHhcCCCC-----------------CcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 99999999999999999999999 8888 7889999999999999999999999999653
No 90
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.90 E-value=1.1e-22 Score=128.92 Aligned_cols=103 Identities=24% Similarity=0.362 Sum_probs=92.8
Q ss_pred cccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcHHHHHHHhCCHHHHHHHHHhhhcCCchh
Q 048100 29 LVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSPLHVAARYGHAAVVGALIEFAEKQPGQE 108 (161)
Q Consensus 29 ~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~ 108 (161)
.+|..|.||||+|+ ..+ ..+++++|++.+++ ++..+..|+||||+|+..++.+++++|++.|++
T Consensus 5 ~~~~~g~t~L~~A~---~~~-------~~~~~~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~----- 68 (137)
T 3c5r_A 5 FTNHRGETLLHIAS---IKG-------DIPSVEYLLQNGSD-PNVKDHAGWTPLHEACNHGHLKVVELLLQHKAL----- 68 (137)
T ss_dssp CCCTTCCCHHHHHH---HHT-------CHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-----
T ss_pred CcCCCCCCHHHHHH---HcC-------CHHHHHHHHHcCCC-CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCc-----
Confidence 57889999999954 444 48999999999987 577899999999999999999999999999988
Q ss_pred hhcCchhHHHHHhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCCCCCCCcC
Q 048100 109 LESGVKSTTRYMLGMKNDEEDTALHEAVQSGSLDVVEILLGADPAFPYSAN 159 (161)
Q Consensus 109 ~~~~~~~~~~~l~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 159 (161)
++.+|..|.||||+|+..|+.+++++|+++|++++.++.
T Consensus 69 ------------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 107 (137)
T 3c5r_A 69 ------------VNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNI 107 (137)
T ss_dssp ------------TTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred ------------ccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Confidence 778899999999999999999999999999999886654
No 91
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.88 E-value=3.5e-23 Score=127.47 Aligned_cols=103 Identities=21% Similarity=0.300 Sum_probs=92.4
Q ss_pred cccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcHHHHHHHhCCHHHHHHHHHhhhcCCchh
Q 048100 29 LVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSPLHVAARYGHAAVVGALIEFAEKQPGQE 108 (161)
Q Consensus 29 ~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~ 108 (161)
.+|..|.||||+|+ ..+ ..+++++|++.+++ ++..+..|+||||+|+..++.+++++|++.|++
T Consensus 4 ~~d~~g~t~L~~A~---~~~-------~~~~~~~Ll~~g~~-~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~----- 67 (115)
T 2l6b_A 4 WGSKDGNTPLHNAA---KNG-------HAEEVKKLLSKGAD-VNARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD----- 67 (115)
T ss_dssp CCSCSSCCHHHHHH---HHT-------CHHHHHHHTTTTCC-SSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCC-----
T ss_pred ccCCCCCCHHHHHH---HcC-------CHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-----
Confidence 46889999999954 444 48999999999987 577899999999999999999999999999988
Q ss_pred hhcCchhHHHHHhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCCCCCCCcC
Q 048100 109 LESGVKSTTRYMLGMKNDEEDTALHEAVQSGSLDVVEILLGADPAFPYSAN 159 (161)
Q Consensus 109 ~~~~~~~~~~~l~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 159 (161)
++.+|..|+||||+|+..++.+++++|+++|++++..+.
T Consensus 68 ------------~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~~~~ 106 (115)
T 2l6b_A 68 ------------VNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSW 106 (115)
T ss_dssp ------------TTCCCTTCCCTTHHHHTTTCHHHHHHHHTTSSSHHHHSC
T ss_pred ------------CcccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCc
Confidence 778899999999999999999999999999999876543
No 92
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.88 E-value=1.3e-22 Score=128.42 Aligned_cols=106 Identities=18% Similarity=0.188 Sum_probs=94.8
Q ss_pred CccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcHHHHHHHhCCHHHHHHHHHhhhcC
Q 048100 25 QLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSPLHVAARYGHAAVVGALIEFAEKQ 104 (161)
Q Consensus 25 ~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~ 104 (161)
..++..+..|.||||+| +..+ ..+++++|++.+++ ++..+..|+||||+|+. ++.+++++|+++|++
T Consensus 3 ~~~~~~~~~g~t~L~~A---~~~~-------~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~- 69 (136)
T 1d9s_A 3 PGIHMLGGSSDAGLATA---AARG-------QVETVRQLLEAGAD-PNALNRFGRRPIQVMMM-GSAQVAELLLLHGAE- 69 (136)
T ss_dssp CCCSCCCCCCSCHHHHH---HHTT-------CHHHHHHHHHTTCC-TTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCC-
T ss_pred CCccCCCCCCccHHHHH---HHcC-------CHHHHHHHHHcCCC-cCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCC-
Confidence 45678899999999994 4555 48999999999987 57789999999999999 999999999999998
Q ss_pred CchhhhcCchhHHHHHhhccCCC-CCcHhHHHHHcCCHHHHHHHHhCCCCCCCCcC
Q 048100 105 PGQELESGVKSTTRYMLGMKNDE-EDTALHEAVQSGSLDVVEILLGADPAFPYSAN 159 (161)
Q Consensus 105 ~~~~~~~~~~~~~~~l~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 159 (161)
++.+|.. |+||||+|+..|+.+++++|+++|++++.++.
T Consensus 70 ----------------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~ 109 (136)
T 1d9s_A 70 ----------------PNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDA 109 (136)
T ss_dssp ----------------SSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSS
T ss_pred ----------------CCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCC
Confidence 7778888 99999999999999999999999999887654
No 93
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.88 E-value=4.8e-22 Score=123.75 Aligned_cols=101 Identities=17% Similarity=0.146 Sum_probs=88.9
Q ss_pred cCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcHHHHHHHhCCHHHHHHHHHhhhcCCchhhh
Q 048100 31 IHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSPLHVAARYGHAAVVGALIEFAEKQPGQELE 110 (161)
Q Consensus 31 ~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~ 110 (161)
+..|.||||+| +..| ..+++++|++.+.+ ++..+..|+||||+|+..++.+++++|++.|++
T Consensus 4 ~~~~~~~l~~A---~~~~-------~~~~v~~ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------- 65 (123)
T 3aaa_C 4 GSMCDKEFMWA---LKNG-------DLDEVKDYVAKGED-VNRTLEGGRKPLHYAADCGQLEILEFLLLKGAD------- 65 (123)
T ss_dssp ---CHHHHHHH---HHTT-------CHHHHHHHHHTTCC-TTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCC-------
T ss_pred ccccchHHHHH---HHcC-------CHHHHHHHHHcCCC-cCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-------
Confidence 46788999994 4555 48999999999987 577899999999999999999999999999988
Q ss_pred cCchhHHHHHhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCCCCCCCcC
Q 048100 111 SGVKSTTRYMLGMKNDEEDTALHEAVQSGSLDVVEILLGADPAFPYSAN 159 (161)
Q Consensus 111 ~~~~~~~~~l~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 159 (161)
++.+|..|+||||+|+..++.+++++|++.|++++.++.
T Consensus 66 ----------~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 104 (123)
T 3aaa_C 66 ----------INAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGP 104 (123)
T ss_dssp ----------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred ----------CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC
Confidence 778899999999999999999999999999999886654
No 94
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.88 E-value=8e-22 Score=117.02 Aligned_cols=91 Identities=27% Similarity=0.310 Sum_probs=83.4
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcH
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSP 81 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 81 (161)
.||||.|+..|+.+.+++|++.+..++.+|..|.||||+| +..+ ..+++++|++.|++ ++..|..|+||
T Consensus 3 ~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A---~~~~-------~~~~v~~Ll~~ga~-~~~~d~~g~t~ 71 (93)
T 1n0q_A 3 RTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLA---ARNG-------HLEVVKLLLEAGAD-VNAKDKNGRTP 71 (93)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH---HHTT-------CHHHHHHHHHTTCC-TTCCCTTSCCH
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHH---HHcC-------CHHHHHHHHHcCCC-CCccCCCCCCH
Confidence 5899999999999999999999999999999999999995 4555 48999999999988 57789999999
Q ss_pred HHHHHHhCCHHHHHHHHHhhhc
Q 048100 82 LHVAARYGHAAVVGALIEFAEK 103 (161)
Q Consensus 82 l~~a~~~~~~~~~~~Ll~~g~~ 103 (161)
||+|+..|+.+++++|++.|++
T Consensus 72 l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 72 LHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999999863
No 95
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.87 E-value=1.9e-21 Score=127.63 Aligned_cols=110 Identities=22% Similarity=0.227 Sum_probs=92.4
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcH
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSP 81 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 81 (161)
.|||+.|+..++.+.++.|++.+.+++.+|..|.||||+| +..| ..+++++|+++|++ ++.+|.+|+||
T Consensus 38 ~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A---~~~g-------~~~~v~~Ll~~gad-vn~~d~~G~Tp 106 (169)
T 4gpm_A 38 RTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHA---AENG-------HKEVVKLLISKGAD-VNAKDSDGRTP 106 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH---HHTT-------CHHHHHHHHHTTCC-TTCCCTTSCCH
T ss_pred CCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHH---HHcC-------CHHHHHHHHHCcCC-CCCCCCCCCCH
Confidence 4799999999999999999999999999999999999994 4455 48899999999887 57788999999
Q ss_pred HHHHHHhCCHHHHHHHHHhhhcCCch----------hhhcCchhHHHHHhh
Q 048100 82 LHVAARYGHAAVVGALIEFAEKQPGQ----------ELESGVKSTTRYMLG 122 (161)
Q Consensus 82 l~~a~~~~~~~~~~~Ll~~g~~~~~~----------~~~~~~~~~~~~l~~ 122 (161)
||+|++.|+.+++++|++.|+++... +...|+.+++++|++
T Consensus 107 Lh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~ 157 (169)
T 4gpm_A 107 LHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEK 157 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 99999999999999999999887655 345666667777764
No 96
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.87 E-value=1.4e-21 Score=123.66 Aligned_cols=102 Identities=19% Similarity=0.195 Sum_probs=89.9
Q ss_pred ccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcHHHHHHHhCCHHHHHHHHHhhhcCCchhh
Q 048100 30 VIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSPLHVAARYGHAAVVGALIEFAEKQPGQEL 109 (161)
Q Consensus 30 ~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~ 109 (161)
....+.||||+|+ ..| ..+++++|++.+.+ ++..+..|+||||+|+..++.+++++|++.|++
T Consensus 10 ~~~~~~t~l~~A~---~~g-------~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------ 72 (136)
T 2jab_A 10 HGSDLGKKLLEAA---RAG-------QDDEVRILMANGAD-VNAKDEYGLTPLYLATAHGHLEIVEVLLKNGAD------ 72 (136)
T ss_dssp --CHHHHHHHHHH---HHT-------CHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC------
T ss_pred ccccccHHHHHHH---HhC-------CHHHHHHHHHcCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------
Confidence 4456889999954 444 48999999999987 577899999999999999999999999999988
Q ss_pred hcCchhHHHHHhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCCCCCCCcC
Q 048100 110 ESGVKSTTRYMLGMKNDEEDTALHEAVQSGSLDVVEILLGADPAFPYSAN 159 (161)
Q Consensus 110 ~~~~~~~~~~l~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 159 (161)
++.+|..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 73 -----------~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 111 (136)
T 2jab_A 73 -----------VNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDK 111 (136)
T ss_dssp -----------TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred -----------CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCC
Confidence 778899999999999999999999999999999876653
No 97
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.87 E-value=1.8e-21 Score=137.75 Aligned_cols=136 Identities=17% Similarity=0.073 Sum_probs=109.3
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhc--------
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQ-------- 73 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~-------- 73 (161)
.||||.|+..|+.+.+++|++.+..++..|..|.||||+|+ ..| +.+++++|+++|+++ +.
T Consensus 74 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~---~~g-------~~~~v~~Ll~~g~~~-~~~~~~g~t~ 142 (299)
T 1s70_B 74 LTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAA---SCG-------YLDIAEYLISQGAHV-GAVNSEGDTP 142 (299)
T ss_dssp CBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH---HHT-------CHHHHHHHHHTTCCT-TCCCTTSCCH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH---HcC-------CHHHHHHHHhCCCCC-CCcCCCCCCH
Confidence 48999999999999999999999999999999999999955 444 478889888887653 21
Q ss_pred ----------------------------------------------------cCCCCCcHHHHHHHhCCHHHHHHHHHhh
Q 048100 74 ----------------------------------------------------VNAKGDSPLHVAARYGHAAVVGALIEFA 101 (161)
Q Consensus 74 ----------------------------------------------------~~~~~~t~l~~a~~~~~~~~~~~Ll~~g 101 (161)
.+..|.||||+|+..|+.+++++|++.|
T Consensus 143 l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 222 (299)
T 1s70_B 143 LDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQAR 222 (299)
T ss_dssp HHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTT
T ss_pred HHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcC
Confidence 2346889999999999999999999999
Q ss_pred hcCCch----------hhhcCchhHHHHHh------hccCCCCCcHhHHHHHcCCHHHHHHHH
Q 048100 102 EKQPGQ----------ELESGVKSTTRYML------GMKNDEEDTALHEAVQSGSLDVVEILL 148 (161)
Q Consensus 102 ~~~~~~----------~~~~~~~~~~~~l~------~~~~~~g~t~l~~a~~~~~~~~~~~Ll 148 (161)
++.+.. +...|+.+++++|+ +.+|..|.||+++|.......+.+++-
T Consensus 223 ~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~l~~l~~ 285 (299)
T 1s70_B 223 YDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDILGYLEELQK 285 (299)
T ss_dssp CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCSGGGHHHHHHHH
T ss_pred CCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 887655 45677777888886 568999999999997754444444443
No 98
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.86 E-value=7.9e-23 Score=149.48 Aligned_cols=142 Identities=14% Similarity=0.141 Sum_probs=109.1
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCcc---ccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccc--hhccCC
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLG---SLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSL--LLQVNA 76 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~---~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~--~~~~~~ 76 (161)
+||||.|++.|+.+.+++|++.+... +..+..|.||||+ |+..| +.+++++|+++|++. .+..+.
T Consensus 93 ~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~---Aa~~G-------~~eiv~~Ll~~gad~~~~~i~~~ 162 (376)
T 2aja_A 93 EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRL---AAENG-------HLHVLNRLCELAPTEIMAMIQAE 162 (376)
T ss_dssp HHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHH---HHHTT-------CHHHHHHHHHSCTTTHHHHHSHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHH---HHHcC-------CHHHHHHHHhCCCCccccccCCC
Confidence 38999999999999999999887622 3455678899999 55556 489999999999641 112222
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHhhhcCCc--h----------hh-hcCchhHHHHHhhccCCCCCcHhHHHHHcCCHHH
Q 048100 77 KGDSPLHVAARYGHAAVVGALIEFAEKQPG--Q----------EL-ESGVKSTTRYMLGMKNDEEDTALHEAVQSGSLDV 143 (161)
Q Consensus 77 ~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~--~----------~~-~~~~~~~~~~l~~~~~~~g~t~l~~a~~~~~~~~ 143 (161)
+ +||||+|+..|+.+++++|+++|++... . +. ..|+.+++++|++.. ..|.|||++|+..|+.++
T Consensus 163 ~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~g-a~~~taL~~Aa~~g~~ev 240 (376)
T 2aja_A 163 N-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCP-VMLAYAEIHEFEYGEKYV 240 (376)
T ss_dssp H-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSH-HHHHHHHHCTTTTTTTTH
T ss_pred C-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCC-CccchHHHHHHHCCCHHH
Confidence 2 8999999999999999999999988543 1 46 788888888888733 457888888888888888
Q ss_pred HHHHHhCCCCCC
Q 048100 144 VEILLGADPAFP 155 (161)
Q Consensus 144 ~~~Ll~~~~~~~ 155 (161)
+++|++.|++++
T Consensus 241 v~lL~~~ga~~~ 252 (376)
T 2aja_A 241 NPFIARHVNRLK 252 (376)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHhcCcccc
Confidence 888887776543
No 99
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.86 E-value=7.6e-21 Score=130.44 Aligned_cols=115 Identities=16% Similarity=0.063 Sum_probs=93.0
Q ss_pred HHHHHhhhCcccc---ccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcHHHHHHHhCCHHH
Q 048100 17 FNQLAIDRQLGSL---VIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSPLHVAARYGHAAV 93 (161)
Q Consensus 17 v~~ll~~~~~~~~---~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~ 93 (161)
++.|++.+..++. .+..|.||||+|+ ..| ..+++++|++.|++ ++..+..|+||||+|+..|+.++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~---~~g-------~~~~v~~Ll~~g~~-~~~~d~~g~tpLh~A~~~g~~~~ 69 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAA---LTG-------ELEVVQQAVKEMND-PSQPNEEGITALHNAICGANYSI 69 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHH---HHT-------CHHHHHHHHHHSSC-TTCCCTTSCCHHHHHHHTTCHHH
T ss_pred CeehhccCCCCccccccccchhHHHHHHH---HcC-------CHHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHcCCHHH
Confidence 3566766666544 4556778899954 445 48999999999987 57789999999999999999999
Q ss_pred HHHHHHhhhcCCchhhhcCchhHHHHHhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCCCCCCCcC
Q 048100 94 VGALIEFAEKQPGQELESGVKSTTRYMLGMKNDEEDTALHEAVQSGSLDVVEILLGADPAFPYSAN 159 (161)
Q Consensus 94 ~~~Ll~~g~~~~~~~~~~~~~~~~~~l~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 159 (161)
+++|++.|++ ++.+|..|+||||+|+..|+.+++++|++.|++++..++
T Consensus 70 v~~Ll~~ga~-----------------~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~ 118 (229)
T 2vge_A 70 VDFLITAGAN-----------------VNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTL 118 (229)
T ss_dssp HHHHHHTTCC-----------------TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCS
T ss_pred HHHHHHCCCC-----------------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccC
Confidence 9999999998 788899999999999999999999999999999987653
No 100
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.86 E-value=1.3e-20 Score=117.09 Aligned_cols=98 Identities=32% Similarity=0.469 Sum_probs=88.2
Q ss_pred CCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcHHHHHHHhCCHHHHHHHHHhhhcCCchhhhcC
Q 048100 33 KKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSPLHVAARYGHAAVVGALIEFAEKQPGQELESG 112 (161)
Q Consensus 33 ~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~ 112 (161)
.|.||||+|+ ..+ ..+++++|++.+.+ ++..+..|.||||+|+..++.+++++|++.|.+
T Consensus 1 ~g~t~L~~A~---~~~-------~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~--------- 60 (126)
T 1n0r_A 1 NGRTPLHLAA---RNG-------HLEVVKLLLEAGAD-VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD--------- 60 (126)
T ss_dssp CCCCHHHHHH---HHT-------CHHHHHHHHHHTCC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC---------
T ss_pred CCccHHHHHH---HcC-------cHHHHHHHHHcCCC-CCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCC---------
Confidence 4899999954 444 48999999999887 567789999999999999999999999999988
Q ss_pred chhHHHHHhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCCCCCCCc
Q 048100 113 VKSTTRYMLGMKNDEEDTALHEAVQSGSLDVVEILLGADPAFPYSA 158 (161)
Q Consensus 113 ~~~~~~~l~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~ 158 (161)
++.+|..|.||||+|+..++.+++++|++.|++++.++
T Consensus 61 --------~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~ 98 (126)
T 1n0r_A 61 --------VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKD 98 (126)
T ss_dssp --------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred --------CcccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCcccC
Confidence 77789999999999999999999999999999987654
No 101
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.86 E-value=8.5e-23 Score=135.52 Aligned_cols=101 Identities=21% Similarity=0.207 Sum_probs=89.0
Q ss_pred ccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcHHHHHHHhCCHHHHHHHHHhhhcCCchhh
Q 048100 30 VIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSPLHVAARYGHAAVVGALIEFAEKQPGQEL 109 (161)
Q Consensus 30 ~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~ 109 (161)
.+..|.||||+| +..| ..+++++|++ +.+ ++..+..|+||||+|+..|+.+++++|+++|++
T Consensus 40 ~~~~g~t~L~~A---~~~g-------~~~~v~~Ll~-~~~-~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~------ 101 (183)
T 3deo_A 40 VVSEYETPWWTA---ARKA-------DEQALSQLLE-DRD-VDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD------ 101 (183)
T ss_dssp HHHHHHHHHHHH---HHTT-------CHHHHHHHTT-TSC-TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC------
T ss_pred CCCCCCCHHHHH---HHcC-------CHHHHHHHHh-cCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC------
Confidence 356899999994 4555 4899999999 665 577899999999999999999999999999998
Q ss_pred hcCchhHHHHHhhccC-CCCCcHhHHHHHcCCHHHHHHHHhCCCCCCCCcC
Q 048100 110 ESGVKSTTRYMLGMKN-DEEDTALHEAVQSGSLDVVEILLGADPAFPYSAN 159 (161)
Q Consensus 110 ~~~~~~~~~~l~~~~~-~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 159 (161)
++.++ ..|+||||+|+..|+.+++++|+++|++++.++.
T Consensus 102 -----------~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~ 141 (183)
T 3deo_A 102 -----------LDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDE 141 (183)
T ss_dssp -----------TTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT
T ss_pred -----------CCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCC
Confidence 66666 8999999999999999999999999999886654
No 102
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.84 E-value=6.9e-21 Score=129.73 Aligned_cols=103 Identities=22% Similarity=0.256 Sum_probs=91.4
Q ss_pred cccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcHHHHHHHhCCHHHHHHHHHh-hhcCCch
Q 048100 29 LVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSPLHVAARYGHAAVVGALIEF-AEKQPGQ 107 (161)
Q Consensus 29 ~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~-g~~~~~~ 107 (161)
..+..|.||||+| +..| ..+++++|++.+++ ++..+..|+||||+|+..|+.+++++|++. |++
T Consensus 68 ~~~~~g~t~L~~A---~~~g-------~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~---- 132 (222)
T 3ehr_A 68 EQAESIDNPLHEA---AKRG-------NLSWLRECLDNRVG-VNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIE---- 132 (222)
T ss_dssp HHEEEESCHHHHH---HHHT-------CHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCC----
T ss_pred ccccccccccccc---cccC-------cHHHHHHHHhCCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCC----
Confidence 3466789999995 4555 48999999999987 577899999999999999999999999998 887
Q ss_pred hhhcCchhHHHHHhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCCCCCCCcC
Q 048100 108 ELESGVKSTTRYMLGMKNDEEDTALHEAVQSGSLDVVEILLGADPAFPYSAN 159 (161)
Q Consensus 108 ~~~~~~~~~~~~l~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 159 (161)
++.+|..|+||||+|+..|+.+++++|+++|++++.++.
T Consensus 133 -------------~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 171 (222)
T 3ehr_A 133 -------------LNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNI 171 (222)
T ss_dssp -------------CCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCT
T ss_pred -------------ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccC
Confidence 778899999999999999999999999999999887654
No 103
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.84 E-value=3.7e-21 Score=118.32 Aligned_cols=103 Identities=21% Similarity=0.252 Sum_probs=91.5
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcH
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSP 81 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 81 (161)
.|+||.|+..|+++.++.|++.+..++..|..|.||||+ |+..+ ..+++++|++.|++ ++..+..|.||
T Consensus 10 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~---A~~~~-------~~~~~~~Ll~~g~~-~~~~d~~g~tp 78 (115)
T 2l6b_A 10 NTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHL---AAKNG-------HAEIVKLLLAKGAD-VNARSKDGNTP 78 (115)
T ss_dssp CCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHH---HHTTT-------CHHHHHHHTTTTCC-TTCCCTTCCCT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHH---HHHcC-------cHHHHHHHHHcCCC-CcccCCCCCCH
Confidence 589999999999999999999999999999999999999 45555 48999999999987 57789999999
Q ss_pred HHHHHHhCCHHHHHHHHHhhhcCCchhhhcCchhHHHHHhhccCCCCCcHh
Q 048100 82 LHVAARYGHAAVVGALIEFAEKQPGQELESGVKSTTRYMLGMKNDEEDTAL 132 (161)
Q Consensus 82 l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~l~~~~~~~g~t~l 132 (161)
||+|+..++.+++++|+++|++ ++.++..|.||-
T Consensus 79 l~~A~~~~~~~~~~~Ll~~ga~-----------------~n~~~~~~~~~~ 112 (115)
T 2l6b_A 79 EHLAKKNGHHEIVKLLDAKGAD-----------------VNARSWGSSHHH 112 (115)
T ss_dssp THHHHTTTCHHHHHHHHTTSSS-----------------HHHHSCCCC---
T ss_pred HHHHHHCCCHHHHHHHHHcCCC-----------------CCcCCccccccc
Confidence 9999999999999999999999 777888888874
No 104
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.84 E-value=2.5e-21 Score=139.19 Aligned_cols=117 Identities=16% Similarity=0.143 Sum_probs=100.0
Q ss_pred HHHHHcCChHHHHHHHhhhCcccc-ccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcHHHH
Q 048100 6 YEAAAKGVIEPFNQLAIDRQLGSL-VIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSPLHV 84 (161)
Q Consensus 6 ~~A~~~g~~~~v~~ll~~~~~~~~-~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~ 84 (161)
|.|+..+..+.++.|++.+.+++. .|..|.||||+| +..| +.+++++|+++|++ ++..+..|+||||+
T Consensus 102 ~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~A---a~~g-------~~~~v~~Ll~~Gad-~n~~d~~g~TpLh~ 170 (327)
T 1sw6_A 102 HVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWL---TSIA-------NLELVKHLVKHGSN-RLYGDNMGESCLVK 170 (327)
T ss_dssp --CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHH---HHTT-------CHHHHHHHHHTTCC-TTBCCTTCCCHHHH
T ss_pred HHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHH---HHcC-------CHHHHHHHHHcCCC-CCCcCCCCCCHHHH
Confidence 556666666777888888899999 899999999994 5555 48999999999988 57889999999999
Q ss_pred HHHhCC---HHHHHHHHHhh-hcCCchhhhcCchhHHHHHhhccCCCCCcHhHHHHH----cCCHHHHHHHHhC
Q 048100 85 AARYGH---AAVVGALIEFA-EKQPGQELESGVKSTTRYMLGMKNDEEDTALHEAVQ----SGSLDVVEILLGA 150 (161)
Q Consensus 85 a~~~~~---~~~~~~Ll~~g-~~~~~~~~~~~~~~~~~~l~~~~~~~g~t~l~~a~~----~~~~~~~~~Ll~~ 150 (161)
|+..|+ .++++.|++.+ .+ ++.+|..|+||||+|+. .|+.+++++|++.
T Consensus 171 A~~~g~~~~~~~~~~ll~~~~~~-----------------~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~ 227 (327)
T 1sw6_A 171 AVKSVNNYDSGTFEALLDYLYPC-----------------LILEDSMNRTILHHIIITSGMTGCSAAAKYYLDI 227 (327)
T ss_dssp HHHSSHHHHTTCHHHHHHHHGGG-----------------GGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHH
T ss_pred HHHhcccccHHHHHHHHHhhhcc-----------------ccCCCCCCCCHHHHHHHHccccccHHHHHHHHHH
Confidence 999998 68888888887 44 67799999999999999 8999999999976
No 105
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.84 E-value=4.9e-21 Score=123.88 Aligned_cols=103 Identities=19% Similarity=0.213 Sum_probs=88.8
Q ss_pred ccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcHHHHHHHhCCHHHHHHHHHhhhcCCch
Q 048100 28 SLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSPLHVAARYGHAAVVGALIEFAEKQPGQ 107 (161)
Q Consensus 28 ~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~ 107 (161)
...+..|.||||+|+ ..| ..+++++|+++|++ ++..+..|+||||+|+ .|+.+++++|++.|++
T Consensus 6 ~~~~~~~~t~L~~A~---~~g-------~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~---- 69 (156)
T 1bi7_B 6 GSSMEPSADWLATAA---ARG-------RVEEVRALLEAGAN-PNAPNSYGRRPIQVMM-MGSARVAELLLLHGAE---- 69 (156)
T ss_dssp ----CCSTTHHHHHH---HHT-------CHHHHHHHHTTTCC-TTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCC----
T ss_pred cCCCccchHHHHHHH---HcC-------CHHHHHHHHHcCCC-CCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCC----
Confidence 345778999999954 444 48999999999887 5778999999999985 8999999999999988
Q ss_pred hhhcCchhHHHHHhhccCCCCCc-HhHHHHHcCCHHHHHHHHhCCCCCCCCcC
Q 048100 108 ELESGVKSTTRYMLGMKNDEEDT-ALHEAVQSGSLDVVEILLGADPAFPYSAN 159 (161)
Q Consensus 108 ~~~~~~~~~~~~l~~~~~~~g~t-~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 159 (161)
++.+|..|+| |||+|+..|+.+++++|+++|++++.++.
T Consensus 70 -------------~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~ 109 (156)
T 1bi7_B 70 -------------PNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDA 109 (156)
T ss_dssp -------------CCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCT
T ss_pred -------------CCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCC
Confidence 7788999999 99999999999999999999999987654
No 106
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.84 E-value=1.1e-20 Score=134.63 Aligned_cols=106 Identities=15% Similarity=0.071 Sum_probs=89.2
Q ss_pred ChHHHHHHHc---CChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCC
Q 048100 2 NSDLYEAAAK---GVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKG 78 (161)
Q Consensus 2 ~~~l~~A~~~---g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~ 78 (161)
.||||.|+.. |+++.+++|++.+.+++.+|..|.||||+| +..| ..+++++|++.|++ ++..|..|
T Consensus 191 ~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A---~~~g-------~~~~v~~Ll~~gad-~~~~d~~G 259 (301)
T 2b0o_E 191 ELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYA---ALYN-------QPDCLKLLLKGRAL-VGTVNEAG 259 (301)
T ss_dssp ECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHH---HHTT-------CHHHHHHHHHTTCC-CSCCCTTS
T ss_pred ccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHH---HHcC-------CHHHHHHHHHcCCC-CCCcCCCC
Confidence 3799999997 899999999999999999999999999994 4555 48999999999988 57889999
Q ss_pred CcHHHHHHHhCCHHHHHHHHHhhhcCCchhhhcCchhHHHHHhhccCCCCCcHhHHHHHcCCH
Q 048100 79 DSPLHVAARYGHAAVVGALIEFAEKQPGQELESGVKSTTRYMLGMKNDEEDTALHEAVQSGSL 141 (161)
Q Consensus 79 ~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~l~~~~~~~g~t~l~~a~~~~~~ 141 (161)
.||||+|+..++.+++++|++.|++ .|.||||+|+..|+.
T Consensus 260 ~TpL~~A~~~~~~~iv~~Ll~~ga~-----------------------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 260 ETALDIARKKHHKECEELLEQAQAG-----------------------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHHHH-----------------------TTSSCCC--------
T ss_pred CCHHHHHHHcCCHHHHHHHHHhcCC-----------------------CCCChhHHHHhcCCc
Confidence 9999999999999999999999875 489999999998864
No 107
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.83 E-value=1.6e-20 Score=129.93 Aligned_cols=101 Identities=22% Similarity=0.216 Sum_probs=89.3
Q ss_pred ccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcHHHHHHHhCCHHHHHHHHHhhhcCCchhh
Q 048100 30 VIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSPLHVAARYGHAAVVGALIEFAEKQPGQEL 109 (161)
Q Consensus 30 ~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~ 109 (161)
.+..|.||||+ ++..| +.+++++|++ +.+ ++..+..|+||||+|+..|+.+++++|+++|++
T Consensus 41 ~~~~g~t~L~~---A~~~g-------~~~~v~~Ll~-~~~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~------ 102 (244)
T 3ui2_A 41 VVSEYETPWWT---AARKA-------DEQALSQLLE-DRD-VDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD------ 102 (244)
T ss_dssp HHHHHHHHHHH---HHTTT-------CHHHHHHTTT-TCC-TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC------
T ss_pred cccCCCCHHHH---HHHcC-------CHHHHHHHHc-CCC-CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC------
Confidence 45679999999 55555 4899999999 766 678899999999999999999999999999998
Q ss_pred hcCchhHHHHHhhccC-CCCCcHhHHHHHcCCHHHHHHHHhCCCCCCCCcC
Q 048100 110 ESGVKSTTRYMLGMKN-DEEDTALHEAVQSGSLDVVEILLGADPAFPYSAN 159 (161)
Q Consensus 110 ~~~~~~~~~~l~~~~~-~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 159 (161)
++.++ ..|+||||+|+..|+.+++++|+++|++++.++.
T Consensus 103 -----------~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~ 142 (244)
T 3ui2_A 103 -----------LDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDE 142 (244)
T ss_dssp -----------TTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred -----------CCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC
Confidence 66666 8899999999999999999999999999987654
No 108
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.83 E-value=4.3e-20 Score=112.87 Aligned_cols=93 Identities=26% Similarity=0.365 Sum_probs=80.5
Q ss_pred cccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcHHHHHHHhCCHHHHHHHHHhhhcCCc
Q 048100 27 GSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSPLHVAARYGHAAVVGALIEFAEKQPG 106 (161)
Q Consensus 27 ~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~ 106 (161)
....+..|.|+||+|+ ..+ ..+++++|++.+++ ++..|..|.||||+|+..|+.+++++|+++|++
T Consensus 17 ~~~~~~~g~t~L~~A~---~~g-------~~~~v~~Ll~~g~~-i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~--- 82 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAA---RAG-------QDDEVRILMANGAD-VAAKDKNGSTPLHLAARNGHLEVVKLLLEAGAD--- 82 (110)
T ss_dssp -----CCHHHHHHHHH---HHT-------CHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC---
T ss_pred ccccCCccchHHHHHH---HcC-------CHHHHHHHHHcCCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---
Confidence 3457889999999954 444 48999999999887 577799999999999999999999999999988
Q ss_pred hhhhcCchhHHHHHhhccCCCCCcHhHHHHHcCCHHHHHHH
Q 048100 107 QELESGVKSTTRYMLGMKNDEEDTALHEAVQSGSLDVVEIL 147 (161)
Q Consensus 107 ~~~~~~~~~~~~~l~~~~~~~g~t~l~~a~~~~~~~~~~~L 147 (161)
++.+|..|+||||+|+..|+.+++++|
T Consensus 83 --------------~~~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 83 --------------VXAQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp --------------TTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred --------------ccccccCCCcHHHHHHHcCCHHHHHHh
Confidence 788899999999999999999999987
No 109
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.82 E-value=2.4e-22 Score=146.88 Aligned_cols=131 Identities=19% Similarity=0.217 Sum_probs=101.1
Q ss_pred hHHHHHHHcCChHHHHHHHhhhCc---cccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchh-ccCCCC
Q 048100 3 SDLYEAAAKGVIEPFNQLAIDRQL---GSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLL-QVNAKG 78 (161)
Q Consensus 3 ~~l~~A~~~g~~~~v~~ll~~~~~---~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~-~~~~~~ 78 (161)
||||.|++.|+.+.|++|++.+.+ .+..+.. .||||+ |+..| +.+++++|+++|+++.. ..+..|
T Consensus 130 tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~---Aa~~G-------~~eiv~~Ll~~ga~~~~~~~d~~g 198 (376)
T 2aja_A 130 QAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRL---AAENG-------HLHVLNRLCELAPTEATAMIQAEN 198 (376)
T ss_dssp HHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHH---HHHTT-------CHHHHHHHHHSCGGGHHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHH---HHHCC-------CHHHHHHHHHcCCccchhccCCCC
Confidence 699999999999999999988854 2222233 999999 55555 48999999999987432 267889
Q ss_pred CcHHHHHH-HhCCHHHHHHHHHhhhcCC---chhhhcCchhHHHHHhhccC--CCCCcHhHHHHHcCCHHHH
Q 048100 79 DSPLHVAA-RYGHAAVVGALIEFAEKQP---GQELESGVKSTTRYMLGMKN--DEEDTALHEAVQSGSLDVV 144 (161)
Q Consensus 79 ~t~l~~a~-~~~~~~~~~~Ll~~g~~~~---~~~~~~~~~~~~~~l~~~~~--~~g~t~l~~a~~~~~~~~~ 144 (161)
+||||+|+ ..|+.+++++|++.|+... ..+...|+.+++++|++... ....+++++|+..|+.+++
T Consensus 199 ~TpL~~Aa~~~G~~eiv~~Ll~~ga~~~taL~~Aa~~g~~evv~lL~~~ga~~~~~~~~l~~A~~~g~~~vv 270 (376)
T 2aja_A 199 YYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLV 270 (376)
T ss_dssp HHHHHHHHSTTCCHHHHHHHTTSHHHHHHHHHCTTTTTTTTHHHHHHHHHHHHHHHHTTTTTTSSSSCCCCS
T ss_pred CCHHHHHHHHCCCHHHHHHHHhCCCccchHHHHHHHCCCHHHHHHHHhcCcccccccHHHHHHHHCCChhhh
Confidence 99999999 9999999999999876421 11578899999999975321 1223578888888887765
No 110
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.80 E-value=3.6e-19 Score=115.37 Aligned_cols=109 Identities=20% Similarity=0.183 Sum_probs=89.5
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcH
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSP 81 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 81 (161)
.||||.|+. |+.+.+++|++.+..++..+..|.||||+|+ ..+ ..+++++|++.|++ ++..+..|.||
T Consensus 39 ~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~---~~~-------~~~~v~~Ll~~g~~-~~~~~~~g~t~ 106 (162)
T 1ihb_A 39 RTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAA---RAG-------FLDTLQTLLEFQAD-VNIEDNEGNLP 106 (162)
T ss_dssp CCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH---HHT-------CHHHHHHHHHTTCC-TTCCCTTSCCH
T ss_pred ccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHH---HcC-------CHHHHHHHHHcCCC-CCCcCCCCCCH
Confidence 578999998 9999999999999999999999999999954 444 48899999999887 57778999999
Q ss_pred HHHHHHhCCHHHHHHHHHhhhcC-Cch----------hhhcCchhHHHHHhh
Q 048100 82 LHVAARYGHAAVVGALIEFAEKQ-PGQ----------ELESGVKSTTRYMLG 122 (161)
Q Consensus 82 l~~a~~~~~~~~~~~Ll~~g~~~-~~~----------~~~~~~~~~~~~l~~ 122 (161)
||+|++.|+.+++++|++.|++. ... +...|+.+++++|++
T Consensus 107 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~ 158 (162)
T 1ihb_A 107 LHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQA 158 (162)
T ss_dssp HHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHH
Confidence 99999999999999999998874 222 345566667777664
No 111
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.76 E-value=6.3e-18 Score=103.16 Aligned_cols=85 Identities=18% Similarity=0.223 Sum_probs=77.5
Q ss_pred ChHHHHHHHcCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCCCcH
Q 048100 2 NSDLYEAAAKGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKGDSP 81 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~ 81 (161)
.|+||.|+..|+.+.+++|++.+..++.+|..|.||||+| +..+ ..+++++|++.|++ ++..+..|+||
T Consensus 25 ~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A---~~~~-------~~~~v~~Ll~~ga~-~~~~d~~g~tp 93 (110)
T 2zgd_A 25 GKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLA---ARNG-------HLEVVKLLLEAGAD-VXAQDKFGKTA 93 (110)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH---HHTT-------CHHHHHHHHHTTCC-TTCCCTTSCCH
T ss_pred chHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHH---HHcC-------CHHHHHHHHHcCCC-ccccccCCCcH
Confidence 4799999999999999999999999999999999999995 4555 48999999999987 57789999999
Q ss_pred HHHHHHhCCHHHHHHH
Q 048100 82 LHVAARYGHAAVVGAL 97 (161)
Q Consensus 82 l~~a~~~~~~~~~~~L 97 (161)
||+|+..++.+++++|
T Consensus 94 l~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 94 FDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHHTCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHh
Confidence 9999999999999987
No 112
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.76 E-value=4e-18 Score=120.04 Aligned_cols=91 Identities=20% Similarity=0.209 Sum_probs=84.1
Q ss_pred ChHHHHHHHc---CChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCC
Q 048100 2 NSDLYEAAAK---GVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKG 78 (161)
Q Consensus 2 ~~~l~~A~~~---g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~ 78 (161)
.||||.|+.. |+.+.++.|++.+.+++.+|..|.||||+| +..| +.+++++|++.|++ ++..|..|
T Consensus 170 ~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A---~~~g-------~~~~v~~Ll~~gad-~~~~d~~g 238 (278)
T 1dcq_A 170 ETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYC---CLTD-------NAECLKLLLRGKAS-IEIANESG 238 (278)
T ss_dssp CBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHH---HHTT-------CHHHHHHHHHTTCC-TTCCCTTS
T ss_pred CCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHH---HHcC-------CHHHHHHHHHcCCC-CCCccCCC
Confidence 5899999999 899999999999999999999999999994 4555 48999999999998 57889999
Q ss_pred CcHHHHHHHhCCHHHHHHHHHhhhc
Q 048100 79 DSPLHVAARYGHAAVVGALIEFAEK 103 (161)
Q Consensus 79 ~t~l~~a~~~~~~~~~~~Ll~~g~~ 103 (161)
.||||+|+..|+.+++++|+++|++
T Consensus 239 ~tpL~~A~~~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 239 ETPLDIAKRLKHEHCEELLTQALSG 263 (278)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999999999986
No 113
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.75 E-value=7.3e-18 Score=122.89 Aligned_cols=101 Identities=16% Similarity=0.118 Sum_probs=88.5
Q ss_pred cCCCCcHHHHHHHHhhh-cccccccccHHHHHHHHHhCccchhccC--CCCCcHHHHHHHhCCHHHHHHHHHhhhcCCch
Q 048100 31 IHKKNSVLHVNIIASYT-QNKEGESVSTKFVELVLETCPSLLLQVN--AKGDSPLHVAARYGHAAVVGALIEFAEKQPGQ 107 (161)
Q Consensus 31 ~~~g~t~l~~a~~a~~~-~~~~~~~~~~~~v~~Ll~~~~~~~~~~~--~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~ 107 (161)
+..+.|+||+ |+.. + ..+++++|++.|+++ +..+ ..|.||||+|+..|+.+++++|+++|++
T Consensus 196 ~~~~~t~L~~---Aa~~~g-------~~~~v~~LL~~Gadv-n~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gad---- 260 (368)
T 3jue_A 196 SLHPGALLFR---ASGHPP-------SLPTMADALAHGADV-NWVNGGQDNATPLIQATAANSLLACEFLLQNGAN---- 260 (368)
T ss_dssp -CCHHHHHHH---HTSSSC-------CHHHHHHHHHTTCCT-TCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC----
T ss_pred cCCCCcHHHH---HHHccC-------CHHHHHHHHHcCCCC-CccccccCCCCHHHHHHHCCCHHHHHHHHHcCCC----
Confidence 3456689999 5555 5 489999999999884 5556 8899999999999999999999999998
Q ss_pred hhhcCchhHHHHHhhccCCCCCcHhHHHHHcCCHHHHHHHHhCCCCCCCCcC
Q 048100 108 ELESGVKSTTRYMLGMKNDEEDTALHEAVQSGSLDVVEILLGADPAFPYSAN 159 (161)
Q Consensus 108 ~~~~~~~~~~~~l~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 159 (161)
++.+|..|+||||+|+..|+.+++++|+++|++++..+.
T Consensus 261 -------------vn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~ 299 (368)
T 3jue_A 261 -------------VNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDS 299 (368)
T ss_dssp -------------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred -------------CCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCC
Confidence 788899999999999999999999999999999987654
No 114
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.74 E-value=9e-18 Score=126.91 Aligned_cols=92 Identities=16% Similarity=0.140 Sum_probs=83.7
Q ss_pred ChHHHHHHH---cCChHHHHHHHhhhCccccccCCCCcHHHHHHHHhhhcccccccccHHHHHHHHHhCccchhccCCCC
Q 048100 2 NSDLYEAAA---KGVIEPFNQLAIDRQLGSLVIHKKNSVLHVNIIASYTQNKEGESVSTKFVELVLETCPSLLLQVNAKG 78 (161)
Q Consensus 2 ~~~l~~A~~---~g~~~~v~~ll~~~~~~~~~~~~g~t~l~~a~~a~~~~~~~~~~~~~~~v~~Ll~~~~~~~~~~~~~~ 78 (161)
.||||.|++ .|+.+.++.|++.+.+++.+|..|.||||+ |+..|+ .+++++|+++|++ ++..|..|
T Consensus 172 ~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~---A~~~g~-------~~~v~~Ll~~ga~-~~~~d~~g 240 (497)
T 3lvq_E 172 ELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHY---AALYNQ-------PDCLKLLLKGRAL-VGTVNEAG 240 (497)
T ss_dssp BCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHH---HTTTTC-------HHHHHHHHHTCCC-CSCCCTTC
T ss_pred chHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHH---HHHcCC-------HHHHHHHHHcCCC-CCCcCCCC
Confidence 489999977 899999999999999999999999999999 566664 8999999999998 57889999
Q ss_pred CcHHHHHHHhCCHHHHHHHHHhhhcC
Q 048100 79 DSPLHVAARYGHAAVVGALIEFAEKQ 104 (161)
Q Consensus 79 ~t~l~~a~~~~~~~~~~~Ll~~g~~~ 104 (161)
+||||+|+..|+.+++++|+++|++.
T Consensus 241 ~tpl~~A~~~~~~~~~~~Ll~~ga~~ 266 (497)
T 3lvq_E 241 ETALDIARKKHHKECEELLEQAQAGT 266 (497)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTCC--
T ss_pred CCHHHHHHHcCCHHHHHHHHHhCCCC
Confidence 99999999999999999999999883
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=76.02 E-value=1.6 Score=20.39 Aligned_cols=20 Identities=30% Similarity=0.524 Sum_probs=16.5
Q ss_pred ChHHHHHHHcCChHHHHHHH
Q 048100 2 NSDLYEAAAKGVIEPFNQLA 21 (161)
Q Consensus 2 ~~~l~~A~~~g~~~~v~~ll 21 (161)
+..+..|+..|+++.++.|-
T Consensus 14 EQqiyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 14 RKQMDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHH
Confidence 34678899999999998874
No 116
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=30.26 E-value=1.7e+02 Score=21.82 Aligned_cols=59 Identities=22% Similarity=0.177 Sum_probs=40.3
Q ss_pred HHhCCHHHHHHHHHhhhcCCchhhhcCchhHHHHHhhc--cCCCCCcHhHHHHHcCCHHHHHHHHh
Q 048100 86 ARYGHAAVVGALIEFAEKQPGQELESGVKSTTRYMLGM--KNDEEDTALHEAVQSGSLDVVEILLG 149 (161)
Q Consensus 86 ~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~l~~~--~~~~g~t~l~~a~~~~~~~~~~~Ll~ 149 (161)
+-.|+...|+.-+..|++...+ ...---.+++- --.-|.|.+|+|++..+.+++..|+.
T Consensus 30 v~e~~~~~ve~y~~~gg~~~r~-----lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 30 VVEGDLAAIEAYKSSGGDIARQ-----LTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHTCHHHHHHHHTTTCCTTCC-----CCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHcCChhHHHHHHhcCCchhcc-----cCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhh
Confidence 4567888888888888774433 11111112222 23578999999999999999999985
Done!