BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048103
(417 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2BGH|A Chain A, Crystal Structure Of Vinorine Synthase
pdb|2BGH|B Chain B, Crystal Structure Of Vinorine Synthase
Length = 421
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 130/409 (31%), Positives = 197/409 (48%), Gaps = 43/409 (10%)
Query: 1 IKPSSSIPKHLRTYKLSMLDQMFSNLHVPFAFFYS--VKEHQDFRKNSDFLKQSL----- 53
I PSS P+ L+ YK+S LDQ+ H+PF FY + + D + S LKQSL
Sbjct: 13 ILPSSPTPQSLKCYKISHLDQLLLTCHIPFILFYPNPLDSNLDPAQTSQHLKQSLSKVLT 72
Query: 54 ----LEDSLIDSFSVECNDHGVTFIEAHVGCDMSKFLRPP-NLEVMQQLIPPSP-QSLKL 107
L + + SV+CND GV F+EA V +S+ ++ LE + Q +P + K+
Sbjct: 73 HFYPLAGRINVNSSVDCNDSGVPFVEARVQAQLSQAIQNVVELEKLDQYLPSAAYPGGKI 132
Query: 108 EASERELLVVQVNYFSPGDVAVGICIWHGLADGSAIFNFMKLWAEINRGVNEKICNNVVL 167
E +E L V++++F G A+G+ + H +AD ++ F+ W RG E + N L
Sbjct: 133 EVNEDVPLAVKISFFECGGTAIGVNLSHKIADVLSLATFLNAWTATCRGETEIVLPNFDL 192
Query: 168 DCTSLFPPHSSIKDQHIKPQSTSKVVFKRLFFDGKKIVALKEKVNKEIMVGSFDHELQAS 227
FPP + + P VV KR FD +KI AL+ + + S E S
Sbjct: 193 -AARHFPPVDNTPSPELVPDE--NVVMKRFVFDKEKIGALRAQAS------SASEEKNFS 243
Query: 228 RFMVVSSLIWGAFIAIVRERK---------RAINNKFKMNPPMIPQCMGNI----FRFVR 274
R +V + IW I + R + +A+N + +MNPP+ MGNI F V
Sbjct: 244 RVQLVVAYIWKHVIDVTRAKYGAKNKFVVVQAVNLRSRMNPPLPHYAMGNIATLLFAAVD 303
Query: 275 AEWSLAEDDDIEVTSLVKEVIKEKRNVSNVMNNIEYLGFMKDMNEAWEDSRSLTLTSVFG 334
AEW D + L+ + + N+ E L M + E E L+ TS
Sbjct: 304 AEW------DKDFPDLIGPLRTSLEKTEDDHNH-ELLKGMTCLYE-LEPQELLSFTSWCR 355
Query: 335 LRYYEVDFGWGKPVWHSNGSISVPNGAFLSDTKDGEGVEAWVALYDEDM 383
L +Y++DFGWGKP+ + N A L DT+ G+GVEAW+ + +++M
Sbjct: 356 LGFYDLDFGWGKPLSACTTTFPKRNAALLMDTRSGDGVEAWLPMAEDEM 404
>pdb|4G0B|A Chain A, Structure Of Native Hct From Coffea Canephora
pdb|4G0B|B Chain B, Structure Of Native Hct From Coffea Canephora
Length = 436
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 183/433 (42%), Gaps = 61/433 (14%)
Query: 1 IKPSSSIPKHLRTYKLSMLDQMFSNLHVPFAFFYSVKEHQDF---RKNSDFLKQSLL--- 54
++P+ P R S +D + N H P +FY +F + D L ++L+
Sbjct: 13 VRPAQETPG--RNLWNSNVDLVVPNFHTPSVYFYRPTGSSNFFDAKVLKDALSRALVPFY 70
Query: 55 ---------EDSLIDSFSVECNDHGVTFIEAH---VGCDMSKFLRPPNLEVMQQLIPPSP 102
ED I+ +ECN GV F+EA V D F P LE +++LIP
Sbjct: 71 PMAGRLKRDEDGRIE---IECNGEGVLFVEAESDGVVDDFGDFA--PTLE-LRRLIPAVD 124
Query: 103 QSLKLEASERELLVVQVNYFSPGDVAVGICIWHGLADGSAIFNFMKLWAEINRGVNEKIC 162
S + S LLV+QV YF G V++G+ + H ADG + +F+ W+++ RG++ +
Sbjct: 125 YSQGI--SSYALLVLQVTYFKCGGVSLGVGMRHHAADGFSGLHFINSWSDMARGLD--VT 180
Query: 163 NNVVLDCTSLF----------------PPHSSIKDQHIKPQSTSKVVFKRLFFDGKKIVA 206
+D T L PP + Q K S + ++I A
Sbjct: 181 LPPFIDRTLLRARDPPQPQFQHIEYQPPPALKVSPQTAKSDSVPETAVSIFKLTREQISA 240
Query: 207 LKEKVNKEIMVGSF-DHELQASRFMVVSSLIWGAFIAIVRERKRAINNKFKMNPPMIPQC 265
LK K ++ S+ +E+ A + G + + A + + ++ P + P
Sbjct: 241 LKAKSKEDGNTISYSSYEMLAGHVWRCACKARGLEVDQGTKLYIATDGRARLRPSLPPGY 300
Query: 266 MGNIFRFVRAEWSLAEDDDIE----VTSLVKEVIKEKRNVSNVMNNIEYLGFMKDMNEAW 321
GN+ F ++A D + + S + + + N + + ++YL D+
Sbjct: 301 FGNVI-FTATPIAIAGDLEFKPVWYAASKIHDALARMDN-DYLRSALDYLELQPDLKALV 358
Query: 322 EDSRS-----LTLTSVFGLRYYEVDFGWGKPVWHSNGSISVPNGAFL--SDTKDGEGVEA 374
+ + L +TS L ++ DFGWG+P++ G I+ +F+ S T DG +
Sbjct: 359 RGAHTFKCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFILPSPTNDGS-MSV 417
Query: 375 WVALYDEDMDKFE 387
++L E M F+
Sbjct: 418 AISLQGEHMKLFQ 430
>pdb|4G22|A Chain A, Structure Of A Lys-Hct Mutant From Coffea Canephora
(Crystal Form 1)
pdb|4G22|B Chain B, Structure Of A Lys-Hct Mutant From Coffea Canephora
(Crystal Form 1)
Length = 439
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 104/433 (24%), Positives = 183/433 (42%), Gaps = 61/433 (14%)
Query: 1 IKPSSSIPKHLRTYKLSMLDQMFSNLHVPFAFFYSVKEHQDF---RKNSDFLKQSLL--- 54
++P+ P R S +D + N H P +FY +F + D L ++L+
Sbjct: 16 VRPAQETPG--RNLWNSNVDLVVPNFHTPSVYFYRPTGSSNFFDAKVLKDALSRALVPFY 73
Query: 55 ---------EDSLIDSFSVECNDHGVTFIEAH---VGCDMSKFLRPPNLEVMQQLIPPSP 102
ED I+ +ECN GV F+EA V D F P LE +++LIP
Sbjct: 74 PMAGRLKRDEDGRIE---IECNGEGVLFVEAESDGVVDDFGDFA--PTLE-LRRLIPAVD 127
Query: 103 QSLKLEASERELLVVQVNYFSPGDVAVGICIWHGLADGSAIFNFMKLWAEINRGVNEKIC 162
S + S LLV+QV YF G V++G+ + H ADG + +F+ W+++ RG++ +
Sbjct: 128 YSQGI--SSYALLVLQVTYFKXGGVSLGVGMRHHAADGFSGLHFINSWSDMARGLD--VT 183
Query: 163 NNVVLDCTSLF----------------PPHSSIKDQHIKPQSTSKVVFKRLFFDGKKIVA 206
+D T L PP ++ Q S + ++I A
Sbjct: 184 LPPFIDRTLLRARDPPQPQFQHIEYQPPPALAVSPQTAASDSVPETAVSIFKLTREQISA 243
Query: 207 LKEKVNKEIMVGSF-DHELQASRFMVVSSLIWGAFIAIVRERKRAINNKFKMNPPMIPQC 265
LK K ++ S+ +E+ A + G + + A + + ++ P + P
Sbjct: 244 LKAKSKEDGNTISYSSYEMLAGHVWRCACKARGLEVDQGTKLYIATDGRARLRPSLPPGY 303
Query: 266 MGNIFRFVRAEWSLAEDDDIE----VTSLVKEVIKEKRNVSNVMNNIEYLGFMKDMNEAW 321
GN+ F ++A D + + S + + + N + + ++YL D+
Sbjct: 304 FGNVI-FTATPIAIAGDLEFKPVWYAASKIHDALARMDN-DYLRSALDYLELQPDLKALV 361
Query: 322 EDSRS-----LTLTSVFGLRYYEVDFGWGKPVWHSNGSISVPNGAFL--SDTKDGEGVEA 374
+ + L +TS L ++ DFGWG+P++ G I+ +F+ S T DG +
Sbjct: 362 RGAHTFKXPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFILPSPTNDGS-MSV 420
Query: 375 WVALYDEDMDKFE 387
++L E M F+
Sbjct: 421 AISLQGEHMKLFQ 433
>pdb|4G2M|A Chain A, Structure Of A Lys-Hct Mutant From Coffea Canephora
(Crystal Form 2)
Length = 439
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 104/433 (24%), Positives = 183/433 (42%), Gaps = 61/433 (14%)
Query: 1 IKPSSSIPKHLRTYKLSMLDQMFSNLHVPFAFFYSVKEHQDF---RKNSDFLKQSLL--- 54
++P+ P R S +D + N H P +FY +F + D L ++L+
Sbjct: 16 VRPAQETPG--RNLWNSNVDLVVPNFHTPSVYFYRPTGSSNFFDAKVLKDALSRALVPFY 73
Query: 55 ---------EDSLIDSFSVECNDHGVTFIEAH---VGCDMSKFLRPPNLEVMQQLIPPSP 102
ED I+ +ECN GV F+EA V D F P LE +++LIP
Sbjct: 74 PMAGRLKRDEDGRIE---IECNGEGVLFVEAESDGVVDDFGDFA--PTLE-LRRLIPAVD 127
Query: 103 QSLKLEASERELLVVQVNYFSPGDVAVGICIWHGLADGSAIFNFMKLWAEINRGVNEKIC 162
S + S LLV+QV YF G V++G+ + H ADG + +F+ W+++ RG++ +
Sbjct: 128 YSQGI--SSYALLVLQVTYFKCGGVSLGVGMRHHAADGFSGLHFINSWSDMARGLD--VT 183
Query: 163 NNVVLDCTSLF----------------PPHSSIKDQHIKPQSTSKVVFKRLFFDGKKIVA 206
+D T L PP ++ Q S + ++I A
Sbjct: 184 LPPFIDRTLLRARDPPQPQFQHIEYQPPPALAVSPQTAASDSVPETAVSIFKLTREQISA 243
Query: 207 LKEKVNKEIMVGSF-DHELQASRFMVVSSLIWGAFIAIVRERKRAINNKFKMNPPMIPQC 265
LK K ++ S+ +E+ A + G + + A + + ++ P + P
Sbjct: 244 LKAKSKEDGNTISYSSYEMLAGHVWRCACKARGLEVDQGTKLYIATDGRARLRPSLPPGY 303
Query: 266 MGNIFRFVRAEWSLAEDDDIE----VTSLVKEVIKEKRNVSNVMNNIEYLGFMKDMNEAW 321
GN+ F ++A D + + S + + + N + + ++YL D+
Sbjct: 304 FGNVI-FTATPIAIAGDLEFKPVWYAASKIHDALARMDN-DYLRSALDYLELQPDLKALV 361
Query: 322 EDSRS-----LTLTSVFGLRYYEVDFGWGKPVWHSNGSISVPNGAFL--SDTKDGEGVEA 374
+ + L +TS L ++ DFGWG+P++ G I+ +F+ S T DG +
Sbjct: 362 RGAHTFKXPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFILPSPTNDGS-MSV 420
Query: 375 WVALYDEDMDKFE 387
++L E M F+
Sbjct: 421 AISLQGEHMKLFQ 433
>pdb|2E1T|A Chain A, Crystal Structure Of Dendranthema Morifolium Dmat
Complexed With Malonyl-coa
pdb|2E1T|B Chain B, Crystal Structure Of Dendranthema Morifolium Dmat
Complexed With Malonyl-coa
pdb|2E1U|A Chain A, Crystal Structure Of Dendranthema Morifolium Dmat
pdb|2E1U|B Chain B, Crystal Structure Of Dendranthema Morifolium Dmat
Length = 454
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 148/364 (40%), Gaps = 60/364 (16%)
Query: 64 VECNDHGVTFIEAHVGCDMSKFLRPPNLEVMQQLIPPSPQSLKL-EASERELLVVQVNYF 122
VE + VTF E ++ + P N + L+P +S +L + + L VQV F
Sbjct: 98 VEGDSVAVTFAECNLDLNELTGNHPRNCDKFYDLVPILGESTRLSDCIKIPLFSVQVTLF 157
Query: 123 SPGDVAVGICIWHGLADGSAIFNFMKLWAEINRGVN--------------EKICNNVVLD 168
+A+GI H L D S F F+K W I R N ++I +LD
Sbjct: 158 PNQGIAIGITNHHCLGDASTRFCFLKAWTSIARSGNNDESFLANGTRPLYDRIIKYPMLD 217
Query: 169 CTSLFPPHSSIKDQHIKPQSTSKVV--FKRLFFDGKKIV-ALKEKVNKEIMVGSFDHELQ 225
L ++ QS + + F + ++ LK++V ++ +
Sbjct: 218 EAYLKRAKVESFNEDYVTQSLAGPSDKLRATFILTRAVINQLKDRVLAQLPTLEY----- 272
Query: 226 ASRFMVVSSLIWGAFIAIVRERKR-----AINNKFKMNPPM----IPQCMGNIFRFVRAE 276
S F V + IW IA R K I+ + +M PP+ C+G +
Sbjct: 273 VSSFTVACAYIWSC-IAKSRNDKLQLFGFPIDRRARMKPPIPTAYFGNCVGGCAAIAKTN 331
Query: 277 WSLAEDDDIEVTSLVKEVIKEKRNVSNVMNNIEYLGFMKDMNEAWEDSRS----LTLTSV 332
+ ++ I L+ E N+ + + + G +KD E++ D S T+T V
Sbjct: 332 LLIGKEGFITAAKLIGE------NLHKTLTDYKD-GVLKDDMESFNDLVSEGMPTTMTWV 384
Query: 333 FG---LRYYEVDFGWGKP-------VWHSNGSISVPNGAFLSDTKDGEGVEAWVALYDED 382
G LR+Y++DFGWGKP + H NG+IS+ S + E +E V +
Sbjct: 385 SGTPKLRFYDMDFGWGKPKKLETVSIDH-NGAISIN-----SCKESNEDLEIGVCISATQ 438
Query: 383 MDKF 386
M+ F
Sbjct: 439 MEDF 442
>pdb|2E1V|A Chain A, Crystal Structure Of Dendranthema Morifolium Dmat, Seleno-
Methionine Derivative
pdb|2E1V|B Chain B, Crystal Structure Of Dendranthema Morifolium Dmat, Seleno-
Methionine Derivative
Length = 454
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 133/344 (38%), Gaps = 73/344 (21%)
Query: 64 VECNDHGVTFIEAHVGCDMSKFLRPPNLEVMQQLIPPSPQSLKL-EASERELLVVQVNYF 122
VE + VTF E ++ + P N + L+P +S +L + + L VQV F
Sbjct: 98 VEGDSVAVTFAECNLDLNELTGNHPRNCDKFYDLVPILGESTRLSDCIKIPLFSVQVTLF 157
Query: 123 SPGDVAVGICIWHGLADGSAIFNFMKLWAEINRGVNEKICNNVVLDCTSLFPPHSSIKDQ 182
+A+GI H L D S F F+K W I R N D + L + D+
Sbjct: 158 PNQGIAIGITNHHCLGDASTRFCFLKAWTSIARSGNN--------DESFLANGTRPLYDR 209
Query: 183 HIKPQSTSKVVFKRLFFDGKKIVALKEKVNKEIMVGSFDHELQA---------------- 226
IK + KR K+ + E + + G D +L+A
Sbjct: 210 IIKYPXLDEAYLKR-----AKVESFNEDYVTQSLAGPSD-KLRATFILTRAVINQLKDRV 263
Query: 227 ----------SRFMVVSSLIWGAFIAIVRERKR-----AINNKFKMNPPM----IPQCMG 267
S F V + IW IA R K I+ + + PP+ C+G
Sbjct: 264 LAQLPTLEYVSSFTVACAYIWSC-IAKSRNDKLQLFGFPIDRRARXKPPIPTAYFGNCVG 322
Query: 268 NIFRFVRAEWSLAEDDDIEVTSLVKEVIKEKRNVSNVMNNIEYLGFMKDMNEAWEDSRS- 326
+ + ++ I L+ E N+ + + + G +KD E++ D S
Sbjct: 323 GCAAIAKTNLLIGKEGFITAAKLIGE------NLHKTLTDYKD-GVLKDDXESFNDLVSE 375
Query: 327 ---LTLTSVFG---LRYYEVDFGWGKP-------VWHSNGSISV 357
T T V G LR+Y+ DFGWGKP + H NG+IS+
Sbjct: 376 GXPTTXTWVSGTPKLRFYDXDFGWGKPKKLETVSIDH-NGAISI 418
>pdb|2XR7|A Chain A, Crystal Structure Of Nicotiana Tabacum Malonyltransferase
(Ntmat1) Complexed With Malonyl-Coa
Length = 453
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 103/270 (38%), Gaps = 49/270 (18%)
Query: 114 LLVVQVNYFSPGDVAVGICIWHGLADGSAIFNFMKLWAEINR-GVNEKICNNVVLDCTSL 172
+L +QV F +++G H DG+ I F++ WA +N+ G +E+ N +
Sbjct: 144 VLAIQVTLFPNHGISIGFTNHHVAGDGATIVKFVRAWALLNKFGGDEQFLANEFIP---- 199
Query: 173 FPPHSSIKDQHIKPQSTSKVVFK-----RLFFDGKKIVALKEKVNKEIMVGSFD------ 221
F S IKD P ++ + +V +KV ++ D
Sbjct: 200 FYDRSVIKD----PNGVGXSIWNEXKKYKHXXKXSDVVTPPDKVRGTFIITRHDIGKLKN 255
Query: 222 -------HELQASRFMVVSSLIWGAFI---AIVRER---------KRAINNKFKMNPPMI 262
+ F V + +W I A E A + + + NPP+
Sbjct: 256 LVLTRRPKLTHVTSFTVTCAYVWTCIIKSEAATGEEIDENGXEFFGCAADCRAQFNPPLP 315
Query: 263 PQCMGN-----IFRFVRAEWSLAEDDDIEVTSLVKEVIKEKRNVSNVMNNIEYLGFMKDM 317
P GN + R + + + E I V + + + K ++ +++ + K+
Sbjct: 316 PSYFGNALVGYVARTRQVDLAGKEGFTIAVELIGEAIRKRXKDEEWILSG----SWFKEY 371
Query: 318 NEAWEDSRSLTLTSVFGLRYYEVDFGWGKP 347
++ + RSL++ L Y DFGWG+P
Sbjct: 372 DKV-DAKRSLSVAGSPKLDLYAADFGWGRP 400
>pdb|3MJ9|L Chain L, Crystal Structure Of Jaml In Complex With The Stimulatory
Antibody Hl4e10
pdb|3MJ8|L Chain L, Crystal Structure Of Hl4e10 Fab, A Hamster Ab Stimulatory
For Gammadelta T Cells
pdb|3MJ8|A Chain A, Crystal Structure Of Hl4e10 Fab, A Hamster Ab Stimulatory
For Gammadelta T Cells
Length = 213
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 8/63 (12%)
Query: 86 LRPPNLEVMQQLIPPSPQSLKLEASERELLVVQVNYFSPGDVAVGICIWHGLADGSAIFN 145
L PN L PPS + LK + + LV +N F P DVAV W ADG+ I
Sbjct: 108 LGQPNAAPSVTLFPPSSEELK---TNQATLVCMINGFYPADVAV---TWE--ADGTPITQ 159
Query: 146 FMK 148
+K
Sbjct: 160 GVK 162
>pdb|1NFD|E Chain E, An Alpha-Beta T Cell Receptor (Tcr) Heterodimer In Complex
With An Anti-Tcr Fab Fragment Derived From A Mitogenic
Antibody
pdb|1NFD|G Chain G, An Alpha-Beta T Cell Receptor (Tcr) Heterodimer In Complex
With An Anti-Tcr Fab Fragment Derived From A Mitogenic
Antibody
Length = 212
Score = 31.6 bits (70), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 8/73 (10%)
Query: 86 LRPPNLEVMQQLIPPSPQSLKLEASERELLVVQVNYFSPGDVAVGICIWHGLADGSAIFN 145
LR P + PPSP+ L+ + + LV VN F PG V W A+G+ I +
Sbjct: 107 LRGPKSSPKVTVFPPSPEELR---TNKATLVCLVNDFYPGSATV---TWK--ANGATIND 158
Query: 146 FMKLWAEINRGVN 158
+K +G N
Sbjct: 159 GVKTTKPSKQGQN 171
>pdb|2P1J|A Chain A, Crystal Structure Of A Polc-Type Dna Polymerase Iii
Exonuclease Domain From Thermotoga Maritima
pdb|2P1J|B Chain B, Crystal Structure Of A Polc-Type Dna Polymerase Iii
Exonuclease Domain From Thermotoga Maritima
Length = 186
Score = 28.1 bits (61), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 23/31 (74%), Gaps = 2/31 (6%)
Query: 286 EVTSLVKEVIKEKRNVSNVMNNIEYLGFMKD 316
E+T + +E+++ KR++ V+ E+LGF++D
Sbjct: 64 EITGITQEMLENKRSIEEVLP--EFLGFLED 92
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,939,010
Number of Sequences: 62578
Number of extensions: 479558
Number of successful extensions: 1002
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 975
Number of HSP's gapped (non-prelim): 15
length of query: 417
length of database: 14,973,337
effective HSP length: 101
effective length of query: 316
effective length of database: 8,652,959
effective search space: 2734335044
effective search space used: 2734335044
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)