Query 048103
Match_columns 417
No_of_seqs 168 out of 1247
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 10:39:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048103.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048103hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g22_A Hydroxycinnamoyl-COA sh 100.0 2.5E-74 8.4E-79 583.8 36.5 373 1-388 16-434 (439)
2 2bgh_A Vinorine synthase; VS, 100.0 3E-74 1E-78 580.2 32.5 380 1-401 13-420 (421)
3 2xr7_A Malonyltransferase; xen 100.0 2.7E-68 9.2E-73 541.9 30.8 378 1-394 10-448 (453)
4 2e1v_A Acyl transferase; BAHD 100.0 2.5E-67 8.4E-72 534.9 33.4 380 1-394 15-448 (454)
5 2rkv_A Trichothecene 3-O-acety 100.0 7.7E-62 2.6E-66 494.2 27.6 376 14-398 5-449 (451)
6 1q9j_A PAPA5, polyketide synth 98.6 5.8E-06 2E-10 81.6 21.7 261 12-301 6-314 (422)
7 2jgp_A Tyrocidine synthetase 3 98.2 0.0001 3.6E-09 74.9 20.4 175 112-301 198-401 (520)
8 1l5a_A Amide synthase, VIBH; n 98.1 9.4E-05 3.2E-09 73.3 17.1 173 112-301 102-305 (436)
9 2xhg_A Tyrocidine synthetase A 97.9 0.00084 2.9E-08 67.0 19.8 178 112-302 124-337 (466)
10 4hvm_A Tlmii; PSI-biology, mid 97.8 0.00034 1.2E-08 70.6 15.0 176 112-302 118-329 (493)
11 2vsq_A Surfactin synthetase su 97.5 0.003 1E-07 71.6 18.5 175 112-301 123-328 (1304)
12 3fot_A 15-O-acetyltransferase; 97.2 0.0091 3.1E-07 60.7 16.3 144 126-277 177-365 (519)
13 3cla_A Type III chloramphenico 74.9 2 6.8E-05 38.0 3.4 43 113-155 164-209 (213)
14 2i9d_A Chloramphenicol acetylt 73.7 2.2 7.5E-05 37.8 3.4 28 127-154 189-216 (217)
15 1q23_A Chloramphenicol acetylt 73.3 2.3 7.8E-05 37.7 3.4 29 127-155 185-213 (219)
16 3b8k_A PDCE2;, dihydrolipoylly 70.8 2.9 9.9E-05 37.6 3.5 29 127-155 204-232 (239)
17 3rqc_A Probable lipoamide acyl 69.6 2.6 9E-05 37.5 2.9 30 127-156 187-216 (224)
18 1dpb_A Dihydrolipoyl-transacet 69.2 3.1 0.00011 37.5 3.4 29 127-155 208-236 (243)
19 1scz_A E2, dihydrolipoamide su 69.0 3.2 0.00011 37.2 3.4 30 127-156 196-225 (233)
20 2ii3_A Lipoamide acyltransfera 67.4 3.6 0.00012 37.6 3.4 29 127-155 224-252 (262)
21 3mae_A 2-oxoisovalerate dehydr 62.0 5.2 0.00018 36.3 3.4 30 127-156 210-239 (256)
22 3l60_A Branched-chain alpha-ke 60.7 5.7 0.0002 35.9 3.4 30 127-156 205-234 (250)
23 3dva_I Dihydrolipoyllysine-res 41.8 5.4 0.00019 39.1 0.0 29 128-156 392-420 (428)
24 1x93_A Hypothetical protein HP 41.4 36 0.0012 22.1 3.8 22 193-214 2-23 (55)
25 2xl1_A Arginine attenuator pep 40.6 21 0.00073 19.1 2.2 19 224-242 6-24 (26)
26 2k1o_A Putative; repressor, tr 35.1 73 0.0025 21.4 4.6 42 190-245 13-54 (66)
27 2xt6_A 2-oxoglutarate decarbox 20.7 55 0.0019 36.1 3.3 30 127-156 192-221 (1113)
No 1
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00 E-value=2.5e-74 Score=583.83 Aligned_cols=373 Identities=21% Similarity=0.349 Sum_probs=308.3
Q ss_pred CCCCCCCCCCCCcccCCcccccccCCCccEEEEecCCCCCCcccchHHHHhhhhhc---------ccC----CCceEEeC
Q 048103 1 IKPSSSIPKHLRTYKLSMLDQMFSNLHVPFAFFYSVKEHQDFRKNSDFLKQSLLED---------SLI----DSFSVECN 67 (417)
Q Consensus 1 V~P~~~tp~~~~~~~LS~lD~~~~~~~~~~~~~f~~~~~~~~~~~~~~Lk~sLs~~---------Rl~----g~~~i~c~ 67 (417)
|+|+.|||. +.++||+||+.+.+.|++.+|||+.++. +....+++||+||+++ ||+ |+++|+||
T Consensus 16 V~P~~~tp~--~~~~LS~lD~~~~~~~~~~~~~y~~~~~-~~~~~~~~Lk~sLs~~L~~f~plAGRl~~~~~g~~~i~c~ 92 (439)
T 4g22_A 16 VRPAQETPG--RNLWNSNVDLVVPNFHTPSVYFYRPTGS-SNFFDAKVLKDALSRALVPFYPMAGRLKRDEDGRIEIECN 92 (439)
T ss_dssp ECCSSCCCC--CEECCCHHHHSCCTTCCCEEEEECCCSC-TTTTCHHHHHHHHHHHTTTTGGGGCEEEECTTSCEEEECC
T ss_pred EeCCCCCCC--CeecCChhHhCccccceeeEEEEcCCCC-ccccHHHHHHHHHHHHHhhccccceeeeeCCCCCEEEEEC
Confidence 789999986 5699999999987899999999986543 2345689999999999 553 68999999
Q ss_pred CCCeEEEEEEecCCcccccCCCChhhhcccCCCCCccccccccccceeE-EEEEEEcCCeEEEeccccccccchhhHHHH
Q 048103 68 DHGVTFIEAHVGCDMSKFLRPPNLEVMQQLIPPSPQSLKLEASERELLV-VQVNYFSPGDVAVGICIWHGLADGSAIFNF 146 (417)
Q Consensus 68 ~~Gv~f~~a~~~~~l~~l~~~p~~~~~~~l~p~~~~~~~~~~~~~~Pll-vQvt~f~cGG~~lg~~~~H~v~Dg~~~~~f 146 (417)
++||.|+||+++.+++|+........+++|+|..+.. .+. .+.|++ ||||+|+|||++||+++||.++||.|+++|
T Consensus 93 ~~Gv~fv~A~~d~~l~~l~~~~p~~~~~~l~p~~~~~--~~~-~~~pll~vQvT~f~cGG~~lg~~~~H~v~Dg~~~~~F 169 (439)
T 4g22_A 93 GEGVLFVEAESDGVVDDFGDFAPTLELRRLIPAVDYS--QGI-SSYALLVLQVTYFKCGGVSLGVGMRHHAADGFSGLHF 169 (439)
T ss_dssp CCCEEEEEEEESSCGGGGTTCCCCGGGGGGSCCCCTT--SCT-TSSCSEEEEEEECTTSCEEEEEEECTTTCCHHHHHHH
T ss_pred CCCCEEEEEEcCCcHHHhcCCCCCHHHHhcCCCCCcc--ccc-ccCceeEEEEEEecCCCEEEEEEeeeccCcHHHHHHH
Confidence 9999999999999999996532234577888865442 222 368999 999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcccCCCCccCCcccCCCCCCCC-------CCCCC---------CCC-CCeEEEEEEecHHHHHHHHH
Q 048103 147 MKLWAEINRGVNEKICNNVVLDCTSLFPPHSSIKD-------QHIKP---------QST-SKVVFKRLFFDGKKIVALKE 209 (417)
Q Consensus 147 l~~Wa~~~rg~~~~~~~~P~~dr~~l~~~~~~p~~-------~~~~~---------~~~-~~~~~~~f~~~~~~i~~Lk~ 209 (417)
+++||++|||... .. .|++||+.+. ++++|.. .+.+. ... .++++++|+|++++|++||+
T Consensus 170 l~~wa~~~rg~~~-~~-~P~~dr~~l~-~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~fs~~~i~~LK~ 246 (439)
T 4g22_A 170 INSWSDMARGLDV-TL-PPFIDRTLLR-ARDPPQPQFQHIEYQPPPALAVSPQTAASDSVPETAVSIFKLTREQISALKA 246 (439)
T ss_dssp HHHHHHHHTTCCC-SS-CCBCCGGGGC-CCSSCCCSSCCGGGSCCC---------------CEEEEEEEECHHHHHHHHH
T ss_pred HHHHHHHhCCCCC-CC-CCcccccccc-CCCCCCCCcCcccccCCCCCcccccccccCCcccceEEEEEECHHHHHHHHH
Confidence 9999999999753 56 7999998664 2333321 11110 111 56899999999999999999
Q ss_pred HhhhhhccCCCCCCCCCcHhHHHHHHHHHHHHHHhcccc-------cccccccccCCCCCCCCccceeEEEEeeeccCcc
Q 048103 210 KVNKEIMVGSFDHELQASRFMVVSSLIWGAFIAIVRERK-------RAINNKFKMNPPMIPQCMGNIFRFVRAEWSLAED 282 (417)
Q Consensus 210 ~a~~~~~~~~~~~~~~~St~d~l~A~lW~~~~~Ar~~~~-------~~vd~R~rl~pplp~~Y~GN~v~~~~~~~~~~~l 282 (417)
++.++. ...++|++|+|+||+|||++|||..++ ++||+|+|++||+|++|+||++..+.+.++++||
T Consensus 247 ~a~~~~------~~~~~St~dal~A~iWr~~~rAr~~~~~~~~~l~~~vd~R~rl~Pplp~~Y~GN~v~~~~~~~~~~el 320 (439)
T 4g22_A 247 KSKEDG------NTISYSSYEMLAGHVWRCACKARGLEVDQGTKLYIATDGRARLRPSLPPGYFGNVIFTATPIAIAGDL 320 (439)
T ss_dssp GGGGGG------CCCCCCHHHHHHHHHHHHHHHHTTCCTTCEEEEEEEEECTTTSSSCCCTTBCSCCEEEECCEEEHHHH
T ss_pred HhhccC------CCCCccHHHHHHHHHHHHHHHhcCCCCCCcEEEEEEEcccCCCCCCCCCCcccceeehhhcceEHHHH
Confidence 998652 246799999999999999999998653 8999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHhhh-hHHHHHH-HHHhhHhhhhh-----ccCCCcEEEeecCCCCCcccccCCCceeeeecCCc
Q 048103 283 DDIEVTSLVKEVIKEKRNVS-NVMNNIE-YLGFMKDMNEA-----WEDSRSLTLTSVFGLRYYEVDFGWGKPVWHSNGSI 355 (417)
Q Consensus 283 ~~~~L~~~A~~Ir~ai~~~~-~~~~~~~-~~~~~~~~~~~-----~~~~~~~~~ssw~~~~~y~~DFG~G~P~~~~~~~~ 355 (417)
.+++|+++|.+||++|.+++ ||+++.+ +++..++.... ..+...+.+|||+|+++|++|||||||+++++...
T Consensus 321 ~~~~L~~~A~~Ir~ai~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vssw~r~~~y~~DFGwGkP~~~~~~~~ 400 (439)
T 4g22_A 321 EFKPVWYAASKIHDALARMDNDYLRSALDYLELQPDLKALVRGAHTFKCPNLGITSWVRLPIHDADFGWGRPIFMGPGGI 400 (439)
T ss_dssp HHSCHHHHHHHHHHHHHTCSHHHHHHHHHHHHTCSCSTTCCCCHHHHCTTCEEEEECTTSCTTCCCCSSCCCSEEEESSC
T ss_pred hhCcHHHHHHHHHHHHHhhCHHHHHHHHHHHHhCccchhhcccCCcCcCCcEEEeecCcCCccccccCCCCcceeecccc
Confidence 88999999999999999999 9999887 54433222111 11234699999999999999999999999998776
Q ss_pred CcCceEEEeecCCC-CcEEEEEECCHHHHHHhhc
Q 048103 356 SVPNGAFLSDTKDG-EGVEAWVALYDEDMDKFEK 388 (417)
Q Consensus 356 ~~~g~~~i~p~~~~-~g~~v~v~L~~e~m~~l~~ 388 (417)
..+|.++++|++++ ||++|.|+|++++|++|++
T Consensus 401 ~~~g~~~~~p~~~~~ggi~v~v~L~~~~m~~f~~ 434 (439)
T 4g22_A 401 AYEGLSFILPSPTNDGSMSVAISLQGEHMKLFQS 434 (439)
T ss_dssp CSTTEEEEEECTTCSSCEEEEEEEEHHHHHHHHH
T ss_pred CCCcEEEEeecCCCCCcEEEEEECCHHHHHHHHH
Confidence 67899999999754 4799999999999999987
No 2
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=100.00 E-value=3e-74 Score=580.23 Aligned_cols=380 Identities=31% Similarity=0.523 Sum_probs=317.9
Q ss_pred CCCCCCCCCCCCcccCCcccccccCCCccEEEEecCCCC--CCcccchHHHHhhhhhc---------ccCCCceEEeCCC
Q 048103 1 IKPSSSIPKHLRTYKLSMLDQMFSNLHVPFAFFYSVKEH--QDFRKNSDFLKQSLLED---------SLIDSFSVECNDH 69 (417)
Q Consensus 1 V~P~~~tp~~~~~~~LS~lD~~~~~~~~~~~~~f~~~~~--~~~~~~~~~Lk~sLs~~---------Rl~g~~~i~c~~~ 69 (417)
|+|+.|||.+.++++||+||+++.+.|++.+|||+.++. .+....+++||+||+++ ||+++++|+||++
T Consensus 13 V~P~~ptp~~~~~~~LS~lD~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~i~c~~~ 92 (421)
T 2bgh_A 13 ILPSSPTPQSLKCYKISHLDQLLLTCHIPFILFYPNPLDSNLDPAQTSQHLKQSLSKVLTHFYPLAGRINVNSSVDCNDS 92 (421)
T ss_dssp EECSSCCCTTSCCCBCCHHHHTSCSSEEEEEEEECCCSSCCCCHHHHHHHHHHHHHHHTTTSGGGGSEEETTTEEECCCC
T ss_pred EeCCCCCCCCCcccCCChHHhcccccccceEEEEeCCCccccchhhHHHHHHHHHHHHhhhcchhccccCCCcEEEEcCC
Confidence 789999997667899999999877899999999986543 13456899999999999 5555789999999
Q ss_pred CeEEEEEEecCCcccccCC-CChhhhcccCCCCCcccccc---ccccceeE-EEEEEEcCCeEEEeccccccccchhhHH
Q 048103 70 GVTFIEAHVGCDMSKFLRP-PNLEVMQQLIPPSPQSLKLE---ASERELLV-VQVNYFSPGDVAVGICIWHGLADGSAIF 144 (417)
Q Consensus 70 Gv~f~~a~~~~~l~~l~~~-p~~~~~~~l~p~~~~~~~~~---~~~~~Pll-vQvt~f~cGG~~lg~~~~H~v~Dg~~~~ 144 (417)
||.|++|+++.+++|+.+. |+...+++|+|... . .+ ...+.|++ +|||+|+|||++||+++||+++||.|++
T Consensus 93 Gv~fv~A~~d~~l~~~~~~~p~~~~~~~l~p~~~-~--~~~~~~~~~~pll~vQvt~f~cgG~~lg~~~~H~v~Dg~~~~ 169 (421)
T 2bgh_A 93 GVPFVEARVQAQLSQAIQNVVELEKLDQYLPSAA-Y--PGGKIEVNEDVPLAVKISFFECGGTAIGVNLSHKIADVLSLA 169 (421)
T ss_dssp CEEEEEEEESSCHHHHHSCCSSGGGGGGGSSSCS-S--SSSSSCCCTTCSEEEEEEECTTSCEEEEEEEETTTCCHHHHH
T ss_pred ceEEEEEEEcCCHHHHhccCCChHHHHhcCCCCC-C--ccccccccCCceEEEEEEEEcCCCEEEEEEeeEEechHHHHH
Confidence 9999999999999999765 66556788888762 2 11 01368999 9999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCcccCCCCccC-CcccCC-CCCCCCCCCCCCCCCCeEEEEEEecHHHHHHHHHHhhhhhccCCCCC
Q 048103 145 NFMKLWAEINRGVNEKICNNVVLDC-TSLFPP-HSSIKDQHIKPQSTSKVVFKRLFFDGKKIVALKEKVNKEIMVGSFDH 222 (417)
Q Consensus 145 ~fl~~Wa~~~rg~~~~~~~~P~~dr-~~l~~~-~~~p~~~~~~~~~~~~~~~~~f~~~~~~i~~Lk~~a~~~~~~~~~~~ 222 (417)
+|+++||++|||...+ . .|.+|| +.+.++ +++|. + ......++.+++|+|++++|++||+++.++. .
T Consensus 170 ~fl~~wa~~~rg~~~~-~-~P~~dr~~~l~p~~~~~~~--~-~~~~~~~~~~~~f~f~~~~i~~LK~~a~~~~------~ 238 (421)
T 2bgh_A 170 TFLNAWTATCRGETEI-V-LPNFDLAARHFPPVDNTPS--P-ELVPDENVVMKRFVFDKEKIGALRAQASSAS------E 238 (421)
T ss_dssp HHHHHHHHHHTTCSCC-C-CCBCSHHHHHSCCCTTCCC--C-CCCCCSSEEEEEEEECHHHHHHHHHHTC----------
T ss_pred HHHHHHHHHhcCCCCC-C-CCccccccccCCCcccCCC--C-ccCCccceEEEEEEECHHHHHHHHHHhhccC------C
Confidence 9999999999997543 6 799999 767665 55443 1 1223457899999999999999999987542 2
Q ss_pred CCCCcHhHHHHHHHHHHHHHHhccc-----c----cccccccccCCCCCCCCccceeEEEEeeeccCccCchhHHHHHHH
Q 048103 223 ELQASRFMVVSSLIWGAFIAIVRER-----K----RAINNKFKMNPPMIPQCMGNIFRFVRAEWSLAEDDDIEVTSLVKE 293 (417)
Q Consensus 223 ~~~~St~d~l~A~lW~~~~~Ar~~~-----~----~~vd~R~rl~pplp~~Y~GN~v~~~~~~~~~~~l~~~~L~~~A~~ 293 (417)
..++|++|+|+||+|||+++||... + ++||+|+|++||+|++|+||++..+.+.+++++ +.+|+++|.+
T Consensus 239 ~~~~St~d~l~A~iW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pplP~~y~GN~~~~~~~~~~~~~--~~~l~~~a~~ 316 (421)
T 2bgh_A 239 EKNFSRVQLVVAYIWKHVIDVTRAKYGAKNKFVVVQAVNLRSRMNPPLPHYAMGNIATLLFAAVDAEW--DKDFPDLIGP 316 (421)
T ss_dssp -CCCCHHHHHHHHHHHHHHHHHHHHSCCCSCEEEEEEEESGGGSSSCCCTTBCSCCEEEEEEEECTTC--CCCGGGGHHH
T ss_pred CCCCchhHhHHHHHHHHHHHHhcccCCCCCceEEEEEecCccccCCCCCCCccceEEEEEEEEecccc--cccHHHHHHH
Confidence 2679999999999999999998642 1 899999999999999999999999999988886 7899999999
Q ss_pred HHHHHHhhh-hHHHHHHHHHhhHhhhhhccCCCcEEEeecCCCCCcccccCCCceeeeecCCcCcCceEEEeecCCCCcE
Q 048103 294 VIKEKRNVS-NVMNNIEYLGFMKDMNEAWEDSRSLTLTSVFGLRYYEVDFGWGKPVWHSNGSISVPNGAFLSDTKDGEGV 372 (417)
Q Consensus 294 Ir~ai~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~~y~~DFG~G~P~~~~~~~~~~~g~~~i~p~~~~~g~ 372 (417)
||++|.+++ +|++.+. ++.+.... ..+.+.+.+|||+++++|++|||||||+++++.....+|.++++|+++++|+
T Consensus 317 ir~ai~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~vssw~~~~~y~~DFGwGkP~~v~~~~~~~~g~~~~~p~~~~~gi 393 (421)
T 2bgh_A 317 LRTSLEKTEDDHNHELL--KGMTCLYE-LEPQELLSFTSWCRLGFYDLDFGWGKPLSACTTTFPKRNAALLMDTRSGDGV 393 (421)
T ss_dssp HHHHTCCCSSCHHHHHH--HHHHHHHT-SCGGGEEEEEEETTSCGGGCCSSSCCCSEEECCCCCSTTEEEEEECTTSSSE
T ss_pred HHHHHHHHHHHHHHHHH--HHHHHhhc-cCCCCeEEEeccccCCCcccccCCCccCeecccccCcCCEEEEEecCCCCeE
Confidence 999999999 8988755 22221111 1123469999999999999999999999999877667899999999988899
Q ss_pred EEEEECCHHHHHHhhcChhhhhhcccCCC
Q 048103 373 EAWVALYDEDMDKFEKNPSIMAYASSNPS 401 (417)
Q Consensus 373 ~v~v~L~~e~m~~l~~d~~~~~~~~~~~~ 401 (417)
+|.|+|++++|++|++ ||.+|++.||+
T Consensus 394 ~v~v~L~~~~m~~f~~--e~~~~~~~~~~ 420 (421)
T 2bgh_A 394 EAWLPMAEDEMAMLPV--ELLSLVDSDFS 420 (421)
T ss_dssp EEEEEEEHHHHHHSCH--HHHTTBCCCCC
T ss_pred EEEEEcCHHHHHHHHH--HHHHhhcCCCC
Confidence 9999999999999999 99999999986
No 3
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=100.00 E-value=2.7e-68 Score=541.93 Aligned_cols=378 Identities=20% Similarity=0.284 Sum_probs=301.3
Q ss_pred CCCCCCCCCCCCcccCCccccccc-CCCccEEEEecCCCCCC--cccchHHHHhhhhhc---------cc------CCCc
Q 048103 1 IKPSSSIPKHLRTYKLSMLDQMFS-NLHVPFAFFYSVKEHQD--FRKNSDFLKQSLLED---------SL------IDSF 62 (417)
Q Consensus 1 V~P~~~tp~~~~~~~LS~lD~~~~-~~~~~~~~~f~~~~~~~--~~~~~~~Lk~sLs~~---------Rl------~g~~ 62 (417)
|+|+.|+++. ++++||+||+.+. ..|++.+|||+.++..+ .+.++++||+||+++ || .|++
T Consensus 10 V~P~~~~~~~-~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~g~~ 88 (453)
T 2xr7_A 10 VVPSPGSATE-LTLPLTYFDHVWLAFHRMRRILFYKLPISRPDFVQTIIPTLKDSLSLTLKYYLPLAGNVACPQDWSGYP 88 (453)
T ss_dssp CCCCTTCCSE-EEEECCHHHHGGGGSCCEEEEEEEECCCCSHHHHHTHHHHHHHHHHHHHTTSGGGGSCCEEESSTTCCC
T ss_pred ecCCCCCCCC-ceECCCHHHhhhhhcCCccEEEEEeCCCCCchhHHHHHHHHHHHHHHHhhhccccCeeEEccCCCCCCE
Confidence 7999875543 7899999999744 46999999998654322 346789999999999 66 3579
Q ss_pred eEEeC-CCCeEEEEEEecCCcccccCC--CChhhhcccCCCCCccccccc--cccceeE-EEEEEEcCCeEEEecccccc
Q 048103 63 SVECN-DHGVTFIEAHVGCDMSKFLRP--PNLEVMQQLIPPSPQSLKLEA--SERELLV-VQVNYFSPGDVAVGICIWHG 136 (417)
Q Consensus 63 ~i~c~-~~Gv~f~~a~~~~~l~~l~~~--p~~~~~~~l~p~~~~~~~~~~--~~~~Pll-vQvt~f~cGG~~lg~~~~H~ 136 (417)
+|+|| ++||.|+||+++.+++++... ++...+++|+|..+.. .+. ..+.|++ +|||+|+|||++||+++||+
T Consensus 89 ~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~--~~~~~~~~~pll~vQvT~f~cGG~~lg~~~~H~ 166 (453)
T 2xr7_A 89 ELRYVTGNSVSVIFSESDMDFNYLIGYHPRNTKDFYHFVPQLAEP--KDAPGVQLAPVLAIQVTLFPNHGISIGFTNHHV 166 (453)
T ss_dssp EEEEETTCCCEEEEEECCSCHHHHTCSSCCCGGGGGGGSCCCCCC--EEETTEEECCCEEEEEEEETTTEEEEEEEECTT
T ss_pred EEEecCCCceEEEEEecCCCHHHhhccCCCChhhhhcCCCCCCCc--ccccccccCCeEEEEEEEccCCcEEEEEeeeee
Confidence 99998 599999999999999999652 2445677888876432 110 0138999 99999999999999999999
Q ss_pred ccchhhHHHHHHHHHHHhc-CC-C---CcccCCCCccCCcccCCCCC-----CCC-C-CC--CC---CCCCCeEEEEEEe
Q 048103 137 LADGSAIFNFMKLWAEINR-GV-N---EKICNNVVLDCTSLFPPHSS-----IKD-Q-HI--KP---QSTSKVVFKRLFF 199 (417)
Q Consensus 137 v~Dg~~~~~fl~~Wa~~~r-g~-~---~~~~~~P~~dr~~l~~~~~~-----p~~-~-~~--~~---~~~~~~~~~~f~~ 199 (417)
++||.|+++|+++||++|| |. . .+.. .|++||+.+.+|..+ ..+ . +. +. ....++.+++|+|
T Consensus 167 v~Dg~~~~~Fl~~wa~~~r~G~~~~~~~~~~-~P~~dr~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f 245 (453)
T 2xr7_A 167 AGDGATIVKFVRAWALLNKFGGDEQFLANEF-IPFYDRSVIKDPNGVGMSIWNEMKKYKHMMKMSDVVTPPDKVRGTFII 245 (453)
T ss_dssp TCCSHHHHHHHHHHHHHHHTTTCGGGSCGGG-SCBCCCSSSCCSSCHHHHTTTTGGGCTTTSCCSCCCCCCSCCCEEEEE
T ss_pred eechhHHHHHHHHHHHHhhcCCCcccCCCCC-CCccccccccCCCCcchHHHHhccccCCccccccccCCCCceEEEEEE
Confidence 9999999999999999999 76 2 1345 689999877644321 001 0 10 00 1234677899999
Q ss_pred cHHHHHHHHHHhhhhhccCCCCCCCCCcHhHHHHHHHHHHHHHHhcc-----cc-------cccccccccCCCCCCCCcc
Q 048103 200 DGKKIVALKEKVNKEIMVGSFDHELQASRFMVVSSLIWGAFIAIVRE-----RK-------RAINNKFKMNPPMIPQCMG 267 (417)
Q Consensus 200 ~~~~i~~Lk~~a~~~~~~~~~~~~~~~St~d~l~A~lW~~~~~Ar~~-----~~-------~~vd~R~rl~pplp~~Y~G 267 (417)
++++|++||+++.++.. ...++|+||+|+||+|||+++||.. ++ ++||+|+|++||+|++|+|
T Consensus 246 ~~~~i~~Lk~~a~~~~~-----~~~~~St~~~l~A~lW~~~~~Ar~~~~~~~~~~~~~~l~~~vd~R~rl~pplP~~Y~G 320 (453)
T 2xr7_A 246 TRHDIGKLKNLVLTRRP-----KLTHVTSFTVTCAYVWTCIIKSEAATGEEIDENGMEFFGCAADCRAQFNPPLPPSYFG 320 (453)
T ss_dssp CHHHHHHHHHHHHHHSC-----CCSCCCHHHHHHHHHHHHHHHHHHHTTCCCCTTSEEEEEEECCTTSCSSSCCCTTBCS
T ss_pred CHHHHHHHHHHHhhcCC-----CCCcccHHHHHHHHHHHHHHHHhccccccCCCCcceEEEEEecccccCCCCCCccccc
Confidence 99999999999986521 1257999999999999999999975 32 8999999999999999999
Q ss_pred ceeEEEEeeeccCccC-chhHHHHHHHHHHHHHh--hh-h-HHHHHHHHHhhHhhhhhccCCCcEEEeecCCCCCccccc
Q 048103 268 NIFRFVRAEWSLAEDD-DIEVTSLVKEVIKEKRN--VS-N-VMNNIEYLGFMKDMNEAWEDSRSLTLTSVFGLRYYEVDF 342 (417)
Q Consensus 268 N~v~~~~~~~~~~~l~-~~~L~~~A~~Ir~ai~~--~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~~y~~DF 342 (417)
|++..+.+.++++||. +.+|+++|.+||++|.+ .+ + |+++ . +++.....+. ...+.+|||+++++|++||
T Consensus 321 N~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~e~~~~~-~---~~~~~~~~~~-~~~~~vssw~~~~~y~~DF 395 (453)
T 2xr7_A 321 NALVGYVARTRQVDLAGKEGFTIAVELIGEAIRKRMKDEEWILSG-S---WFKEYDKVDA-KRSLSVAGSPKLDLYAADF 395 (453)
T ss_dssp CCCCEEEEEEEHHHHTSSSHHHHHHHHHHHHHTTSSSCHHHHHSS-C---TTSCCCCSCG-GGEEEECSCSSCCGGGCCC
T ss_pred ceeeeeeeeeeHHHhcCcchHHHHHHHHHHHHHhhccCCccchhh-H---HHHHHHhhcc-CCcEEEeccccCCcccccc
Confidence 9999999999999998 48999999999999999 56 7 8876 2 3322211222 2369999999999999999
Q ss_pred CCCceeeeecCCcCcCc--eEEEeecCCCC-cEEEEEECCHHHHHHhhcChhhhh
Q 048103 343 GWGKPVWHSNGSISVPN--GAFLSDTKDGE-GVEAWVALYDEDMDKFEKNPSIMA 394 (417)
Q Consensus 343 G~G~P~~~~~~~~~~~g--~~~i~p~~~~~-g~~v~v~L~~e~m~~l~~d~~~~~ 394 (417)
|||||+++++.....+| .++++|+++++ |++|.|+|++++|++|++ +|.+
T Consensus 396 G~G~P~~v~~~~~~~~g~~~~~l~~~~~~~ggi~v~v~L~~~~m~~f~~--~~~~ 448 (453)
T 2xr7_A 396 GWGRPEKLEFVSIDNDDGISMSLSKSKDSDGDLEIGLSLSKTRMNAFAA--MFTH 448 (453)
T ss_dssp SSCSCSEEEEGGGSSCSSCEEEEEECSSSTTCEEEEECCCHHHHHHHHH--HHHH
T ss_pred CCCcceEEEeeeecCCCceEEEEeecCCCCCCEEEEEEeCHHHHHHHHH--HHHH
Confidence 99999999987766678 88888887654 799999999999999976 6654
No 4
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=100.00 E-value=2.5e-67 Score=534.93 Aligned_cols=380 Identities=21% Similarity=0.273 Sum_probs=297.8
Q ss_pred CCCCCCCCCCCCcccCCccccccc-CCCccEEEEecCCCCCC--cccchHHHHhhhhhc---------ccC------CCc
Q 048103 1 IKPSSSIPKHLRTYKLSMLDQMFS-NLHVPFAFFYSVKEHQD--FRKNSDFLKQSLLED---------SLI------DSF 62 (417)
Q Consensus 1 V~P~~~tp~~~~~~~LS~lD~~~~-~~~~~~~~~f~~~~~~~--~~~~~~~Lk~sLs~~---------Rl~------g~~ 62 (417)
|+|+.|+++. +.++||+||+.+. ..|++.+|||+.++..+ .+..+++||+||+++ ||+ |++
T Consensus 15 V~P~~~~~~~-~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~g~~ 93 (454)
T 2e1v_A 15 VSPPPDTLGD-KSLQLTFFDFFWLRSPPINNLFFYELPITRSQFTETVVPNIKHSLSITLKHFYPFVGKLVVYPAPTKKP 93 (454)
T ss_dssp ECCCTTSCCC-EEEECCHHHHTTTTCCCEEEEEEEECCCCHHHHHHTHHHHHHHHHHHHHTTCGGGGSEEEECSSSSSCC
T ss_pred EeCCCCCCCC-ceecCchHHhhhhccCCccEEEEEeCCCCcchhhHHHHHHHHHHHHHHhhhccccceeeeeccCCCCCE
Confidence 7899875543 7899999999744 46999999998654212 345789999999999 553 479
Q ss_pred eEEeC-CCCeEEEEEEecCCcccccCC-C-ChhhhcccCCCCCccccccc--cccceeE-EEEEEEcCCeEEEecccccc
Q 048103 63 SVECN-DHGVTFIEAHVGCDMSKFLRP-P-NLEVMQQLIPPSPQSLKLEA--SERELLV-VQVNYFSPGDVAVGICIWHG 136 (417)
Q Consensus 63 ~i~c~-~~Gv~f~~a~~~~~l~~l~~~-p-~~~~~~~l~p~~~~~~~~~~--~~~~Pll-vQvt~f~cGG~~lg~~~~H~ 136 (417)
+|+|| ++||.|+||+++.+++|+... + +...+++|+|..+.. .+. ..+.|++ +|||+|+|||++||+++||+
T Consensus 94 ~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~--~~~~~~~~~pll~vQvT~f~cgG~~lg~~~~H~ 171 (454)
T 2e1v_A 94 EICYVEGDSVAVTFAECNLDLNELTGNHPRNCDKFYDLVPILGES--TRLSDCIKIPLFSVQVTLFPNQGIAIGITNHHC 171 (454)
T ss_dssp EEEECTTCCEEEEEEEECSCGGGTSSSSCEEGGGGGGGSCCCCCC--EECSSCEEEECEEEEEEEETTTEEEEEEEECGG
T ss_pred EEEECCCCcEEEEEEEeCCCHHHhcCCCCCcchhhhcCCCCCCCc--ccccccccCceEEEEEEEecCCcEEEEEEeeee
Confidence 99999 599999999999999999652 2 344577888876432 111 1256999 99999999999999999999
Q ss_pred ccchhhHHHHHHHHHHHhc-CCC-----CcccCCCCccCCcccCCC-------CCCCCC------CCCCCCCCCeEEEEE
Q 048103 137 LADGSAIFNFMKLWAEINR-GVN-----EKICNNVVLDCTSLFPPH-------SSIKDQ------HIKPQSTSKVVFKRL 197 (417)
Q Consensus 137 v~Dg~~~~~fl~~Wa~~~r-g~~-----~~~~~~P~~dr~~l~~~~-------~~p~~~------~~~~~~~~~~~~~~f 197 (417)
++||.|+++|+++||++|| |.. .+.. .|++|| .+..|. ..+... +.......+.++++|
T Consensus 172 v~Dg~~~~~Fl~awa~~~r~g~~~~~~~~~~~-~P~~dr-~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 249 (454)
T 2e1v_A 172 LGDASTRFCFLKAWTSIARSGNNDESFLANGT-RPLYDR-IIKYPMLDEAYLKRAKVESFNEDYVTQSLAGPSDKLRATF 249 (454)
T ss_dssp GCCHHHHHHHHHHHHHHHHTTSCCHHHHHHSC-CCBCCC-CCCCHHHHHHHHHHTTCTTHHHHCCCCCCCCCCCEEEEEE
T ss_pred ecchhHHHHHHHHHHHHhccCCCccccCCCCC-CCcccc-cCCCCCcchHHHHhhhccccccccCcccCCCCCCceEEEE
Confidence 9999999999999999999 763 1245 789999 553211 000000 000002346789999
Q ss_pred EecHHHHHHHHHHhhhhhccCCCCCCCCCcHhHHHHHHHHHHHHHHhcccc-----cccccccccCCCCCCCCccceeEE
Q 048103 198 FFDGKKIVALKEKVNKEIMVGSFDHELQASRFMVVSSLIWGAFIAIVRERK-----RAINNKFKMNPPMIPQCMGNIFRF 272 (417)
Q Consensus 198 ~~~~~~i~~Lk~~a~~~~~~~~~~~~~~~St~d~l~A~lW~~~~~Ar~~~~-----~~vd~R~rl~pplp~~Y~GN~v~~ 272 (417)
+|++++|++||+++.++.. ...++|++|+|+||+|||+++|| .+. ++||+|+|++||+|++|+||++..
T Consensus 250 ~f~~~~i~~LK~~a~~~~~-----~~~~~St~d~l~A~lWr~~~~Ar-~~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~~ 323 (454)
T 2e1v_A 250 ILTRAVINQLKDRVLAQLP-----TLEYVSSFTVACAYIWSCIAKSR-NDKLQLFGFPIDRRARMKPPIPTAYFGNCVGG 323 (454)
T ss_dssp EECHHHHHHHHHHHHHHCT-----TCSCCCHHHHHHHHHHHHHHHHH-CCSEEEEEEEEECGGGSSSCCCTTBCSCCEEE
T ss_pred EECHHHHHHHHHHHhhcCC-----CCCcccHHHHHHHHHHHHHhhhc-CCCceEEEEEecchhccCCCCCcccccceeee
Confidence 9999999999999986521 12579999999999999999999 322 899999999999999999999999
Q ss_pred EEeeeccCccCc-hhHHHHHHHHHHHHHhhh-hHHHHHH-H--HHhhHhhhhhccCCCcEEEeecCCCCCcccccCCCce
Q 048103 273 VRAEWSLAEDDD-IEVTSLVKEVIKEKRNVS-NVMNNIE-Y--LGFMKDMNEAWEDSRSLTLTSVFGLRYYEVDFGWGKP 347 (417)
Q Consensus 273 ~~~~~~~~~l~~-~~L~~~A~~Ir~ai~~~~-~~~~~~~-~--~~~~~~~~~~~~~~~~~~~ssw~~~~~y~~DFG~G~P 347 (417)
+.+.++++||.+ .+|+++|.+||++|.+++ +|+++.+ . .+|.+.....+ +...+.+|||+++++|++|||||||
T Consensus 324 ~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~vssw~~~~~y~~DFG~G~P 402 (454)
T 2e1v_A 324 CAAIAKTNLLIGKEGFITAAKLIGENLHKTLTDYKDGVLKDDMESFNDLVSEGM-PTTMTWVSGTPKLRFYDMDFGWGKP 402 (454)
T ss_dssp EEEEEEGGGTSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC-----CHHHHHCC-CSEEEEEECCTTSCGGGCCSSSCSC
T ss_pred EEeecchhhccccccHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHhhc-CCceEEEecCCCCCcccccccCccc
Confidence 999999999984 899999999999999997 7765533 1 12222222222 2236999999999999999999999
Q ss_pred eeeecCCcCcCceEEEeecCCCC-cEEEEEECCHHHHHHhhcChhhhh
Q 048103 348 VWHSNGSISVPNGAFLSDTKDGE-GVEAWVALYDEDMDKFEKNPSIMA 394 (417)
Q Consensus 348 ~~~~~~~~~~~g~~~i~p~~~~~-g~~v~v~L~~e~m~~l~~d~~~~~ 394 (417)
+++++.....+|.++++|+++++ |++|.|+|++++|++|++ +|.+
T Consensus 403 ~~v~~~~~~~~g~~~l~p~~~~~ggi~v~v~L~~~~m~~f~~--~~~~ 448 (454)
T 2e1v_A 403 KKLETVSIDHNGAISINSCKESNEDLEIGVCISATQMEDFVH--IFDD 448 (454)
T ss_dssp SEEEEGGGGGSSEEEEEECSSCTTSEEEEEEEEHHHHHHHHH--HHHH
T ss_pred eEEEeeeeCCCCeEEEEecCCCCCCEEEEEEECHHHHHHHHH--HHHH
Confidence 99998776667889999988754 799999999999999976 6654
No 5
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=100.00 E-value=7.7e-62 Score=494.18 Aligned_cols=376 Identities=16% Similarity=0.192 Sum_probs=285.1
Q ss_pred ccCCcccccc--cCCCccEEEEecCCCCCCcccchHHHHhhhhhc---------ccC---------CCceEEeCCCCeEE
Q 048103 14 YKLSMLDQMF--SNLHVPFAFFYSVKEHQDFRKNSDFLKQSLLED---------SLI---------DSFSVECNDHGVTF 73 (417)
Q Consensus 14 ~~LS~lD~~~--~~~~~~~~~~f~~~~~~~~~~~~~~Lk~sLs~~---------Rl~---------g~~~i~c~~~Gv~f 73 (417)
++||.|||++ .+.|++.+|||+.++..+...++++||+||+++ ||+ |+++|.|++.++.|
T Consensus 5 ~~Ls~lD~~~~~~~~y~~~~~~y~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~~~~g~~~i~~~~~~~~~ 84 (451)
T 2rkv_A 5 IQLDTLGQLPGLLSIYTQISLLYPVSDSSQYPTIVSTFEQGLKRFSEAVPWVAGQVKAEGISEGNTGTSFIVPFEDVPRV 84 (451)
T ss_dssp EECCGGGGCTTGGGCEEEEEEEEECSCGGGHHHHHHHHHHHHHHHHHHSGGGGCEEEEESCBTTBCCEEEEECCCSSCEE
T ss_pred ccCChhhcCccccccceeEEEEEECCCCCCHHHHHHHHHHHHHHHHHhCCceeEEEEECCCCCCCCCcEEEeecCCCCeE
Confidence 6899999987 689999999998543213456789999999999 541 45788887777779
Q ss_pred EEEEecC-----CcccccC--CCChhhh--cccCCCCCccccc-c-ccccceeE-EEEEEEcCCeEEEeccccccccchh
Q 048103 74 IEAHVGC-----DMSKFLR--PPNLEVM--QQLIPPSPQSLKL-E-ASERELLV-VQVNYFSPGDVAVGICIWHGLADGS 141 (417)
Q Consensus 74 ~~a~~~~-----~l~~l~~--~p~~~~~--~~l~p~~~~~~~~-~-~~~~~Pll-vQvt~f~cGG~~lg~~~~H~v~Dg~ 141 (417)
++++++. +++++.. .|. ..+ ..+.|........ + ...+.|++ +|||+| |||++||+++||+++||.
T Consensus 85 ~va~~~~d~~~p~~~~l~~~~~p~-~~~~~~~~~p~~~~p~~~~~~~~~~~pll~vQvT~~-~GG~~lg~~~~H~v~Dg~ 162 (451)
T 2rkv_A 85 VVKDLRDDPSAPTIEGMRKAGYPM-AMFDENIIAPRKTLPIGPGTGPDDPKPVILLQLNFI-KGGLILTVNGQHGAMDMV 162 (451)
T ss_dssp EEEECTTCTTSCBHHHHHHHTSCG-GGSBHHHHCSSCSSSCSTTCSTTSCCBSEEEEEEEE-BTEEEEEEEEETTTCCHH
T ss_pred EEEeCCCCCCCCCHHHHHHcCCCh-hhcCHhhcCCcccCCCCcccCCCCCCceEEEEEEEe-cCceeeeeeehhccccHH
Confidence 9988764 5666643 232 111 1233322110000 0 11258999 999965 799999999999999999
Q ss_pred hHHHHHHHHHHHhcCCCCcc---cCCCCccCCcccCC--CCCCC--CC-----CCC-----CCCCCCeEEEEEEecHHHH
Q 048103 142 AIFNFMKLWAEINRGVNEKI---CNNVVLDCTSLFPP--HSSIK--DQ-----HIK-----PQSTSKVVFKRLFFDGKKI 204 (417)
Q Consensus 142 ~~~~fl~~Wa~~~rg~~~~~---~~~P~~dr~~l~~~--~~~p~--~~-----~~~-----~~~~~~~~~~~f~~~~~~i 204 (417)
|+++|+++||++|||.+.+. . .|++||+.+.+. +.+|. ++ +.+ .....++.+++|+|++++|
T Consensus 163 g~~~Fl~awa~~~rg~~~~~~~~~-~p~~dr~~~~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~~~~i 241 (451)
T 2rkv_A 163 GQDAVIRLLSKACRNDPFTEEEMT-AMNLDRKTIVPYLENYTIGPEVDHQIVKADVAGGDAVLTPVSASWAFFTFSPKAM 241 (451)
T ss_dssp HHHHHHHHHHHHHHTCCCCHHHHH-HTTCCSTTSSCCCTTCCCCGGGTTCBCCTTSCC-------CCEEEEEEEECHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCccccc-cccCchhhccccccccCCCccccccccCCCCCCCCCCCCCCCceEEEEEECHHHH
Confidence 99999999999999975221 2 478888755432 12221 11 110 1123568899999999999
Q ss_pred HHHHHHhhhhhccCCCCCCCCCcHhHHHHHHHHHHHHHHh-c-ccc-------cccccccccCCCCCCCCccceeEEEEe
Q 048103 205 VALKEKVNKEIMVGSFDHELQASRFMVVSSLIWGAFIAIV-R-ERK-------RAINNKFKMNPPMIPQCMGNIFRFVRA 275 (417)
Q Consensus 205 ~~Lk~~a~~~~~~~~~~~~~~~St~d~l~A~lW~~~~~Ar-~-~~~-------~~vd~R~rl~pplp~~Y~GN~v~~~~~ 275 (417)
++||+++.+++. ....++|++|+|+||+|||+++|| . .++ ++||+|+|++ +|++|+||++..+.+
T Consensus 242 ~~LK~~a~~~~~----~~~~~~St~d~l~A~~Wr~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~--lP~~y~GN~~~~~~~ 315 (451)
T 2rkv_A 242 SELKDAATKTLD----ASTKFVSTDDALSAFIWKSASRVRLERIDGSAPTEFCRAVDARPAMG--VSNNYPGLLQNMTYH 315 (451)
T ss_dssp HHHHHHHHTTCC----TTCSCCCHHHHHHHHHHHHHHHHHTTTSCTTSEEEEEEEEECHHHHT--CCTTCCSCCEEEEEE
T ss_pred HHHHHHHhhhcc----CCCCCccHHHHHHHHHHHHHHHHHhccCCCCCceEEEEEecccccCC--CCCCCcccceeeecc
Confidence 999999986531 013679999999999999999998 3 222 8999999998 899999999999999
Q ss_pred eeccCccCchhHHHHHHHHHHHHHhhh-hH-HHHHH-HHHhhHhhhhh-c----cCCCcEEEeecCCCCCcccccC--CC
Q 048103 276 EWSLAEDDDIEVTSLVKEVIKEKRNVS-NV-MNNIE-YLGFMKDMNEA-W----EDSRSLTLTSVFGLRYYEVDFG--WG 345 (417)
Q Consensus 276 ~~~~~~l~~~~L~~~A~~Ir~ai~~~~-~~-~~~~~-~~~~~~~~~~~-~----~~~~~~~~ssw~~~~~y~~DFG--~G 345 (417)
.++++||.+.+|+++|.+||++|.+++ +| +++.+ +++..++.... + .....+.+|||+++++|++||| ||
T Consensus 316 ~~~~~el~~~~L~~~a~~ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~~y~~DFG~gwG 395 (451)
T 2rkv_A 316 NSTIGEIANESLGATASRLRSELDPASMRQRTRGLATYLHNNPDKSNVSLTADADPSTSVMLSSWAKVGLWDYDFGLGLG 395 (451)
T ss_dssp EEEHHHHHHSCHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCSCCTTBCTTTTCCTTTCEEEEECTTCCGGGCCTTCSSC
T ss_pred cCcHHHhccchHHHHHHHHHHHhcccCchhHHHHHHHHHhcCCCccccccccccCCCCCEEEeccccCCccccccCCCCC
Confidence 999999999999999999999999999 88 88877 44433222111 1 1123599999999999999998 89
Q ss_pred ceeeeecCC-cCcCceEEEeecCCCCcEEEEEECCHHHHHHhhcChhhhhhccc
Q 048103 346 KPVWHSNGS-ISVPNGAFLSDTKDGEGVEAWVALYDEDMDKFEKNPSIMAYASS 398 (417)
Q Consensus 346 ~P~~~~~~~-~~~~g~~~i~p~~~~~g~~v~v~L~~e~m~~l~~d~~~~~~~~~ 398 (417)
||++++.+. ...+|.++++|++.+||++|.|+|++++|++|++|++|++|++.
T Consensus 396 ~P~~v~~~~~~~~~g~~~~~p~~~~ggi~v~v~L~~~~m~~f~~d~ef~~~~~~ 449 (451)
T 2rkv_A 396 KPETVRRPIFEPVESLMYFMPKKPDGEFCAALSLRDEDMDRLKADKEWTKYAQY 449 (451)
T ss_dssp SCSEEECCBCSCCTTEEEECCCCTTSCEEEEEEEEHHHHHHHHHCHHHHTTCEE
T ss_pred CceEEEcCCccCCCCEEEEecCCCCCCEEEEEEeCHHHHHHHhcCHHHHhhhee
Confidence 999998654 33678888898766668999999999999999999999999875
No 6
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=98.58 E-value=5.8e-06 Score=81.61 Aligned_cols=261 Identities=13% Similarity=0.104 Sum_probs=142.0
Q ss_pred CcccCCccccccc-CCC-ccEEEEecCCCCCCcccchHHHHhhhhhc--c---cCCCceEEeCCCC-eEEEEEEecCC-c
Q 048103 12 RTYKLSMLDQMFS-NLH-VPFAFFYSVKEHQDFRKNSDFLKQSLLED--S---LIDSFSVECNDHG-VTFIEAHVGCD-M 82 (417)
Q Consensus 12 ~~~~LS~lD~~~~-~~~-~~~~~~f~~~~~~~~~~~~~~Lk~sLs~~--R---l~g~~~i~c~~~G-v~f~~a~~~~~-l 82 (417)
..+|||++++.+. ..| +...+-++.+ ...+.|++++.++ | |+-+ +...+.| +..+....+.. +
T Consensus 6 ~~~pls~~Q~~~~~~~y~~~~~~~l~g~------ld~~~l~~A~~~lv~rh~~LRt~--f~~~~~~~~q~v~~~~~~~~~ 77 (422)
T 1q9j_A 6 VIRKLSHSEEVFAQYEVFTSMTIQLRGV------IDVDALSDAFDALLETHPVLASH--LEQSSDGGWNLVADDLLHSGI 77 (422)
T ss_dssp EEEECCHHHHHHHHTTCEEEEEEEEESC------CCHHHHHHHHHHHHHHCGGGSEE--EEECTTSSEEEEECCSSSCCC
T ss_pred eeecCCHHHHHHHhcCceEEEEEEEecC------CCHHHHHHHHHHHHHhCccceEE--EEecCCcceeeeccCCCCCce
Confidence 4689999987432 223 4444444432 4478899999998 2 3322 2222222 22222222211 1
Q ss_pred --ccccCCCChhhhcccCCCCCccccccccccceeE-EEEEEEcCCeEEEeccccccccchhhHHHHHHHHHHHhcC---
Q 048103 83 --SKFLRPPNLEVMQQLIPPSPQSLKLEASERELLV-VQVNYFSPGDVAVGICIWHGLADGSAIFNFMKLWAEINRG--- 156 (417)
Q Consensus 83 --~~l~~~p~~~~~~~l~p~~~~~~~~~~~~~~Pll-vQvt~f~cGG~~lg~~~~H~v~Dg~~~~~fl~~Wa~~~rg--- 156 (417)
.|+........+.. .. .. .+ ...|++ +.+.. ..++..|.+.+||+++||.|+..|++.|.+.+++
T Consensus 78 ~~~d~~~~~~~~~~~~---~~-~~--~d--~~~pl~r~~l~~-~~~~~~l~l~~hH~i~Dg~S~~~l~~~l~~~Y~~~~~ 148 (422)
T 1q9j_A 78 CVIDGTAATNGSPSGN---AE-LR--LD--QSVSLLHLQLIL-REGGAELTLYLHHCMADGHHGAVLVDELFSRYTDAVT 148 (422)
T ss_dssp EEEC---------------CC-CC--CC--TTTCSEEEEEEC-CSSSCEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCcchhhhc---cc-Cc--cC--CCCCcEEEEEEe-cCCCeEEEEEeceEEEchhhHHHHHHHHHHHHHHhhc
Confidence 22221111111111 01 11 12 267888 88877 7789999999999999999999999999999872
Q ss_pred -CCCccc-CCCCcc--------CCccc-------C-CCCC-----C-CCC-CC--CCCCCCCeEEEEEEecHHHHHHHHH
Q 048103 157 -VNEKIC-NNVVLD--------CTSLF-------P-PHSS-----I-KDQ-HI--KPQSTSKVVFKRLFFDGKKIVALKE 209 (417)
Q Consensus 157 -~~~~~~-~~P~~d--------r~~l~-------~-~~~~-----p-~~~-~~--~~~~~~~~~~~~f~~~~~~i~~Lk~ 209 (417)
...... ..+..+ +.... . .++. + ... |. +...........+.++.+..++|++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~lp~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 228 (422)
T 1q9j_A 149 TGDPGPITPQPTPLSMEAVLAQRGIRKQGLSGAERFMSVMYAYEIPATETPAVLAHPGLPQAVPVTRLWLSKQQTSDLMA 228 (422)
T ss_dssp SSSCCCCCCCCCCBCHHHHHHHSSCCC-----CTTSSTTTTCC-------------CCSBCCCCEEEECCCHHHHHHHHH
T ss_pred cCCCCCCCCCCCCCCHHHHHHhcCCcccccchhhhhhhhhhcccCCCcccCCCCCCCCCCCCccceEEEeCHHHHHHHHH
Confidence 221111 011111 10000 0 0111 1 000 00 0011122456788999999999999
Q ss_pred HhhhhhccCCCCCCCCCcHhHHHHHHHHHHHHHH--hcccc----cccccccccCCCCCCCCccceeEEEEeeeccCccC
Q 048103 210 KVNKEIMVGSFDHELQASRFMVVSSLIWGAFIAI--VRERK----RAINNKFKMNPPMIPQCMGNIFRFVRAEWSLAEDD 283 (417)
Q Consensus 210 ~a~~~~~~~~~~~~~~~St~d~l~A~lW~~~~~A--r~~~~----~~vd~R~rl~pplp~~Y~GN~v~~~~~~~~~~~l~ 283 (417)
.|... .+|.+.++.|.+...+.+- .+..+ ++++.|....|+++..=+.|.+.+....+++. .
T Consensus 229 ~a~~~----------~~t~~~~l~aa~~~~l~r~~~~~~~~v~~g~~~~~R~~~~~~~~~~~~~~~vG~f~n~lp~~--~ 296 (422)
T 1q9j_A 229 FGREH----------RLSLNAVVAAAILLTEWQLRNTPHVPIPYVYPVDLRFVLAPPVAPTEATNLLGAASYLAEIG--P 296 (422)
T ss_dssp HHTTT----------TCCHHHHHHHHHHHHHHHHHTCSSCCEEEEEEEETTTTSSSCCCTTTBSCCEEEEEEEECCC--S
T ss_pred HHHHh----------CCCHHHHHHHHHHHHHHhcccCCCceEEEeeeeecccccCCCCChhhhhhhheeeeeeeecc--C
Confidence 88743 5789999998876666654 22333 78999998766543222344444443334433 2
Q ss_pred chhHHHHHHHHHHHHHhh
Q 048103 284 DIEVTSLVKEVIKEKRNV 301 (417)
Q Consensus 284 ~~~L~~~A~~Ir~ai~~~ 301 (417)
+.++.++++.|++.+.+.
T Consensus 297 ~~~~~~~l~~v~~~~~~~ 314 (422)
T 1q9j_A 297 NTDIVDLASDIVATLRAD 314 (422)
T ss_dssp SCCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHH
Confidence 446778888888877653
No 7
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=98.19 E-value=0.0001 Score=74.94 Aligned_cols=175 Identities=9% Similarity=0.021 Sum_probs=114.3
Q ss_pred cceeE-EEEEEEcCCeEEEeccccccccchhhHHHHHHHHHHHhcCCCCcccCCCCcc-----CCc--------------
Q 048103 112 RELLV-VQVNYFSPGDVAVGICIWHGLADGSAIFNFMKLWAEINRGVNEKICNNVVLD-----CTS-------------- 171 (417)
Q Consensus 112 ~~Pll-vQvt~f~cGG~~lg~~~~H~v~Dg~~~~~fl~~Wa~~~rg~~~~~~~~P~~d-----r~~-------------- 171 (417)
..|++ +.+.....+...|.+.+||+++||.|+..|++.+.+.++|...+....+..| +..
T Consensus 198 ~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~el~~~Y~~~~l~~~~~~~~d~~~~~~~~~~~~~~~~~~~yW~ 277 (520)
T 2jgp_A 198 VAPLIRVSLLKIGEDRYVLFTDMHHSISDGVSSGILLAEWVQLYQGDVLPELRIQYKDFAVWQQEFSQSAAFHKQEAYWL 277 (520)
T ss_dssp SSCCEEEEEEEEETTEEEEEEEEBGGGCCHHHHHHHHHHHHHHHTTCCCCCCSCCHHHHHHHHHHHTTSHHHHHHHHHHH
T ss_pred CCcceeEEEEEEcCCcEEEEEEccceeecHhHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcChhhHHHHHHHH
Confidence 56888 8777776678999999999999999999999999999998632111011101 100
Q ss_pred --ccC---CCCCCCCCCCCCCCCCCeEEEEEEecHHHHHHHHHHhhhhhccCCCCCCCCCcHhHHHHHHHHHHHHHHhcc
Q 048103 172 --LFP---PHSSIKDQHIKPQSTSKVVFKRLFFDGKKIVALKEKVNKEIMVGSFDHELQASRFMVVSSLIWGAFIAIVRE 246 (417)
Q Consensus 172 --l~~---~~~~p~~~~~~~~~~~~~~~~~f~~~~~~i~~Lk~~a~~~~~~~~~~~~~~~St~d~l~A~lW~~~~~Ar~~ 246 (417)
+.. +..+|...+.+...........+.++.+..++|++.|... .+|.+.++.|.+-..+.+-.+.
T Consensus 278 ~~l~~~~~~~~lp~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~----------~~T~~~~l~aa~a~~L~~~~~~ 347 (520)
T 2jgp_A 278 QTFADDIPVLNLPTDFTRPSTQSFAGDQCTIGAGKALTEGLHQLAQAT----------GTTLYMVLLAAYNVLLAKYAGQ 347 (520)
T ss_dssp HHTSSCCCCCCCCCSSCCCSSCCCBEEEEEEECCHHHHHHHHHHHHHH----------TCCHHHHHHHHHHHHHHHHHTC
T ss_pred HHhCCCCCcCCCCCCCCCCCCCCCCccEEEEeCCHHHHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHhcCC
Confidence 000 0011111111111223456678899999999999988754 4788999888766666655555
Q ss_pred cc----cccccccccCCCCCCCCccceeEEEEeeeccCccCchhHHHHHHHHHHHHHhh
Q 048103 247 RK----RAINNKFKMNPPMIPQCMGNIFRFVRAEWSLAEDDDIEVTSLVKEVIKEKRNV 301 (417)
Q Consensus 247 ~~----~~vd~R~rl~pplp~~Y~GN~v~~~~~~~~~~~l~~~~L~~~A~~Ir~ai~~~ 301 (417)
++ +++++|..- --++-+|+.+-.......... +.++.++++.|++.+.+.
T Consensus 348 ~dv~~g~~~~gR~~~---~~~~~vG~f~n~lplr~~~~~--~~~~~~~l~~v~~~~~~~ 401 (520)
T 2jgp_A 348 EDIIVGTPITGRSHA---DLEPIVGMFVNTLAMRNKPQR--EKTFSEFLQEVKQNALDA 401 (520)
T ss_dssp SCEEEEEEECCCCSG---GGTTCCSCCCEEEEEEECCCT--TSBHHHHHHHHHHHHHHH
T ss_pred CCeEEEeccCCCCch---hhhccEEeeeeeeeEEecCCC--CCCHHHHHHHHHHHHHHH
Confidence 55 788888752 224567777666555555442 457888888888877653
No 8
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=98.09 E-value=9.4e-05 Score=73.28 Aligned_cols=173 Identities=12% Similarity=0.027 Sum_probs=113.0
Q ss_pred cceeE-EEEEEEcCCeEEEeccccccccchhhHHHHHHHHHHHhc----CCCCcccCCCCcc------CCcccCC-----
Q 048103 112 RELLV-VQVNYFSPGDVAVGICIWHGLADGSAIFNFMKLWAEINR----GVNEKICNNVVLD------CTSLFPP----- 175 (417)
Q Consensus 112 ~~Pll-vQvt~f~cGG~~lg~~~~H~v~Dg~~~~~fl~~Wa~~~r----g~~~~~~~~P~~d------r~~l~~~----- 175 (417)
..|++ +.+.....+...|.+.+||+++||.|+..|++.+.+.++ |...+.. .+.+. +..+...
T Consensus 102 ~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 180 (436)
T 1l5a_A 102 DAPITSHQVYRLSHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHYQSLLSGQTPTAA-FKPYQSYLEEEAAYLTSHRYWQD 180 (436)
T ss_dssp TSCSCEEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHHHHTCCCCCC-CCCHHHHHHHHHHHHTSHHHHHH
T ss_pred CCCCeEEEEEEEcCCEEEEEEeehhheecHhHHHHHHHHHHHHHHHHhcCCCCCCC-ccCHHHHHHHHHHhhccHhHHHH
Confidence 56888 777777668899999999999999999999999999987 4431111 11110 0000000
Q ss_pred --------CCCCC-CC-CCC-CCCCCCeEEEEEEecHHHHHHHHHHhhhhhccCCCCCCCCCcHhHHHHHHHHHHHHHHh
Q 048103 176 --------HSSIK-DQ-HIK-PQSTSKVVFKRLFFDGKKIVALKEKVNKEIMVGSFDHELQASRFMVVSSLIWGAFIAIV 244 (417)
Q Consensus 176 --------~~~p~-~~-~~~-~~~~~~~~~~~f~~~~~~i~~Lk~~a~~~~~~~~~~~~~~~St~d~l~A~lW~~~~~Ar 244 (417)
.+.|. .. |.. ...........+.++.+..++|++.|... .+|.+.++.|.+-..+.+-.
T Consensus 181 ~~~W~~~l~~~~~~~~lp~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~----------~~t~~~~l~aa~~~~L~~~~ 250 (436)
T 1l5a_A 181 KQFWQGYLREAPDLTLTSATYDPQLSHAVSLSYTLNSQLNHLLLKLANAN----------QIGWPDALVALCALYLESAE 250 (436)
T ss_dssp HHHHHHHHHTSCCCCBCCTTCCGGGCCEEEEEEECCHHHHHHHHHHHHHT----------TCCHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHhcCCCCcccCCCCCCCCcccceeeEEecCHHHHHHHHHHHHHh----------CCCHHHHHHHHHHHHHHHhh
Confidence 01111 01 111 11123346778899999999999988754 47889999888766676666
Q ss_pred cccc----cccccccccCCCCCCCCccceeEEEEeeeccCccCchhHHHHHHHHHHHHHhh
Q 048103 245 RERK----RAINNKFKMNPPMIPQCMGNIFRFVRAEWSLAEDDDIEVTSLVKEVIKEKRNV 301 (417)
Q Consensus 245 ~~~~----~~vd~R~rl~pplp~~Y~GN~v~~~~~~~~~~~l~~~~L~~~A~~Ir~ai~~~ 301 (417)
+ ++ +++++|.. + --++-+|+.+-.......... +.++.++++.|++.+.+.
T Consensus 251 g-~dv~ig~~~~~R~~--~-~~~~~vG~f~n~lplr~~~~~--~~t~~~~l~~v~~~~~~~ 305 (436)
T 1l5a_A 251 P-DAPWLWLPFMNRWG--S-VAANVPGLMVNSLPLLRLSAQ--QTSLGNYLKQSGQAIRSL 305 (436)
T ss_dssp T-TCCEEEEEECCCTT--S-GGGGSCSCCCEEEEEECCCCT--TCBHHHHHHHHHHHHHHH
T ss_pred C-CceEEeeecccCCC--h-HHhcCcceEEEEEEEEEecCC--CCCHHHHHHHHHHHHHHH
Confidence 6 65 78888865 2 235567777666555554432 457888888888887654
No 9
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=97.88 E-value=0.00084 Score=66.95 Aligned_cols=178 Identities=13% Similarity=0.023 Sum_probs=111.3
Q ss_pred cceeE-EEEEEEcCCeEEEeccccccccchhhHHHHHHHHHHHhc----CCCCcccC-CCC-c-c-----CCccc-----
Q 048103 112 RELLV-VQVNYFSPGDVAVGICIWHGLADGSAIFNFMKLWAEINR----GVNEKICN-NVV-L-D-----CTSLF----- 173 (417)
Q Consensus 112 ~~Pll-vQvt~f~cGG~~lg~~~~H~v~Dg~~~~~fl~~Wa~~~r----g~~~~~~~-~P~-~-d-----r~~l~----- 173 (417)
..|++ +.+.... ++-.|-+.+||.++||.|+..|++.+.+.++ |.. +... .+. + | +..+.
T Consensus 124 ~~pl~r~~l~~~~-~~~~l~l~~HH~i~Dg~S~~~l~~el~~~Y~~~~~g~~-~~l~~~~~~y~~~~~~~~~~~~~~~~~ 201 (466)
T 2xhg_A 124 EGPLVKVALFQTL-HGDHLFLAIHHLVVDGISWRILFEDLATGYAQALAGQA-ISLPEKTDSFQSWSQWLQEYANEADLL 201 (466)
T ss_dssp TCCCEEEEEEEET-TEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHTTCC-CCCCCCCSCHHHHHHHHHHHTTSHHHH
T ss_pred CCCeEEEEEEEcC-CCCEEEEEeeeeeechhhHHHHHHHHHHHHHHHHcCCC-CCCCCCCCCHHHHHHHHHHHhcCccch
Confidence 56888 8887777 4445779999999999999999999999886 332 1110 111 1 0 00000
Q ss_pred -------------CCCCCCCCCCCCCCCCCCeEEEEEEecHHHHHHHHHHhhhhhccCCCCCCCCCcHhHHHHHHHHHHH
Q 048103 174 -------------PPHSSIKDQHIKPQSTSKVVFKRLFFDGKKIVALKEKVNKEIMVGSFDHELQASRFMVVSSLIWGAF 240 (417)
Q Consensus 174 -------------~~~~~p~~~~~~~~~~~~~~~~~f~~~~~~i~~Lk~~a~~~~~~~~~~~~~~~St~d~l~A~lW~~~ 240 (417)
++..+|...+.+...........+.++.+..++|++.+... ..+|.++++.|.+-..+
T Consensus 202 ~~~~~W~~~l~~~~~~~lp~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~---------~~~t~~~~llaa~~~~l 272 (466)
T 2xhg_A 202 SEIPYWESLESQAKNVSLPKDYEVTDCKQKSVRNMRIRLHPEETEQLLKHANQA---------YQTEINDLLLAALGLAF 272 (466)
T ss_dssp TTHHHHHHHHHHCCCCCCCCSSCCSSCBGGGEEEEEEECCHHHHHHHHHTGGGT---------TTCCHHHHHHHHHHHHH
T ss_pred hhhHHHHHhhccCCcccCCccccccccccccceEEEEEcCHHHHHHHHHHhHHh---------hCCCHHHHHHHHHHHHH
Confidence 11111111111111223456778899999999999877532 35788999888776666
Q ss_pred HHHhcccc----cccccccccCC-CCCCCCccceeEEEEeeeccCccCchhHHHHHHHHHHHHHhhh
Q 048103 241 IAIVRERK----RAINNKFKMNP-PMIPQCMGNIFRFVRAEWSLAEDDDIEVTSLVKEVIKEKRNVS 302 (417)
Q Consensus 241 ~~Ar~~~~----~~vd~R~rl~p-plp~~Y~GN~v~~~~~~~~~~~l~~~~L~~~A~~Ir~ai~~~~ 302 (417)
.+-.+.++ +++++|....+ +--.+-+|+.+-..-....... +.++.++++.|++.+.+..
T Consensus 273 ~~~~~~~dv~ig~~~~gR~~~~~~~~~~~~vG~f~n~lplr~~~~~--~~~~~~~l~~v~~~~~~~~ 337 (466)
T 2xhg_A 273 AEWSKLAQIVIHLEGHGREDIIEQANVARTVGWFTSQYPVLLDLKQ--TAPLSDYIKLTKENMRKIP 337 (466)
T ss_dssp HHHHCCSEEEEEEEECCCCSCSTTCCCTTCCSCCCEEEEEEEECSC--CCSHHHHHHHHHHHHHHSG
T ss_pred HHHhCCCceEEEecCCCCCccccCCCccccccceeeeccEEEecCC--CCCHHHHHHHHHHHHHhCc
Confidence 66555444 77888876421 1234567777655555544432 4578888999998887654
No 10
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=97.78 E-value=0.00034 Score=70.58 Aligned_cols=176 Identities=13% Similarity=0.015 Sum_probs=106.5
Q ss_pred cceeE-EEEEEEcCCeEEEeccccccccchhhHHHHHHHHHHHhcCCCCcccCCCC---ccCC--cccCC----------
Q 048103 112 RELLV-VQVNYFSPGDVAVGICIWHGLADGSAIFNFMKLWAEINRGVNEKICNNVV---LDCT--SLFPP---------- 175 (417)
Q Consensus 112 ~~Pll-vQvt~f~cGG~~lg~~~~H~v~Dg~~~~~fl~~Wa~~~rg~~~~~~~~P~---~dr~--~l~~~---------- 175 (417)
..|++ +.+.....+...|.+.+||+++||.|+..+++.+.+.+.|...+ ..... +.+. .+...
T Consensus 118 ~~pl~r~~l~~~~~~~~~l~l~~HH~i~Dg~S~~~l~~~l~~~Y~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~W~ 196 (493)
T 4hvm_A 118 RDPLVRLHLVRLSETDVVLGVVAHQMLLDARSRYMVLGAVWQAYYGRFRP-AQYRDFAEVADFHPLDRETVRVARHRWWS 196 (493)
T ss_dssp TSCSEEEEEEECSSSEEEEEEEEETTTCCHHHHHHHHHHHHHHHTTCCCG-GGSBCGGGTTTCCTTCSHHHHHHHHHHHH
T ss_pred CCCeEEEEEEEECCCcEEEEEecchhhccHHHHHHHHHHHHHHhCCCCCC-cCHHHHHHHHhhhhcccChhhHHHHHHHH
Confidence 46888 77777776678999999999999999999999999999876422 10111 1111 11000
Q ss_pred ---CCCCCCCCCCCCCCCCeEEEEEEecHHHHHHHHHHhhhhhccCCCCCCCCCc--HhHHHHHHHHHHHHHH-------
Q 048103 176 ---HSSIKDQHIKPQSTSKVVFKRLFFDGKKIVALKEKVNKEIMVGSFDHELQAS--RFMVVSSLIWGAFIAI------- 243 (417)
Q Consensus 176 ---~~~p~~~~~~~~~~~~~~~~~f~~~~~~i~~Lk~~a~~~~~~~~~~~~~~~S--t~d~l~A~lW~~~~~A------- 243 (417)
.+.|.+...+ ..........+.++.+..++|++.|... .+| .+.++.|.+-..+.+-
T Consensus 197 ~~l~~~~~l~~~~-~~~~~~~~~~~~l~~~~~~~l~~~a~~~----------~vt~~~~~~l~aa~a~~L~~~~~~~~~~ 265 (493)
T 4hvm_A 197 RRLPALPVRGGDG-GPVGPPETSRLRVPGSRWQALTEPGGPL----------GGNGSLAMAALTAWWLWTQGAGTGTDTG 265 (493)
T ss_dssp HHGGGSCCCC--------CCEEEEEEEEHHHHHHHHCC----------------CHHHHHHHHHHHHHHHC---------
T ss_pred HhccCCCCCCCCC-CCCCCCeeEEEEcCHHHHHHHHHHHHHc----------CCCchHHHHHHHHHHHHHHHhhhccccc
Confidence 0111111000 0111256778899999999999876643 477 8998888766555554
Q ss_pred ----hcccc----cccccccccCCCCCCCCccceeEEEEeeeccCccCchhHHHHHHHHHHHHHhhh
Q 048103 244 ----VRERK----RAINNKFKMNPPMIPQCMGNIFRFVRAEWSLAEDDDIEVTSLVKEVIKEKRNVS 302 (417)
Q Consensus 244 ----r~~~~----~~vd~R~rl~pplp~~Y~GN~v~~~~~~~~~~~l~~~~L~~~A~~Ir~ai~~~~ 302 (417)
.+.++ +++++|.. + --++.+|+.+-.....+......+.++.++++.|++.+.+.-
T Consensus 266 ~~~~~g~~dv~~g~~~~gR~~--~-~~~~~vG~f~n~lplr~~~~~~~~~t~~~~l~~v~~~~~~~~ 329 (493)
T 4hvm_A 266 AGTGTGKDSLYLSTEVDLRDH--L-QLGSVVGPLTDRVVFGVDLTGLREPSFRDLMSRTQAGFLDAV 329 (493)
T ss_dssp -------CEEEEEEEEEHHHH--T-TCCSBCSCCEEEEEEEEECTTCSSCBHHHHHHHHHHHHHHHH
T ss_pred ccCcCCCCCEEEEeeccCCCC--c-chhcCeEeeeceeEEEEecCCCcCCCHHHHHHHHHHHHHHHH
Confidence 33333 78888866 2 235677887666655555443224578888888888776544
No 11
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=97.47 E-value=0.003 Score=71.56 Aligned_cols=175 Identities=9% Similarity=-0.011 Sum_probs=111.8
Q ss_pred cceeE-EEEEEEcCCeEEEeccccccccchhhHHHHHHHHHHHhcC----CCCccc-CCC-Ccc-----C-C--------
Q 048103 112 RELLV-VQVNYFSPGDVAVGICIWHGLADGSAIFNFMKLWAEINRG----VNEKIC-NNV-VLD-----C-T-------- 170 (417)
Q Consensus 112 ~~Pll-vQvt~f~cGG~~lg~~~~H~v~Dg~~~~~fl~~Wa~~~rg----~~~~~~-~~P-~~d-----r-~-------- 170 (417)
..|++ +.+.....+...|-+.+||+++||.|+..+++.+++.+++ .. +.. ..+ .-| + .
T Consensus 123 ~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y~~~~~g~~-~~l~~~~~y~d~~~~~~~~~~~~~~~y 201 (1304)
T 2vsq_A 123 RDIPMRAAIFKKAEESFEWVWSYHHIILDGWCFGIVVQDLFKVYNALREQKP-YSLPPVKPYKDYIKWLEKQDKQASLRY 201 (1304)
T ss_dssp TSCSEEEEEEEEETTEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHTTCC-CCCCCCCCTHHHHHHHHTSCHHHHHHH
T ss_pred CCCcEEEEEEEECCCcEEEEEecCceeechhhHHHHHHHHHHHHHHhhcCCC-CCCCCcccHHHHHHHHhcchhhHHHHH
Confidence 56888 8888877678999999999999999999999999998864 22 111 011 111 0 0
Q ss_pred ---cccC---CCCCCCCCCCCCCCCCCeEEEEEEecHHHHHHHHHHhhhhhccCCCCCCCCCcHhHHHHHHHHHHHHHHh
Q 048103 171 ---SLFP---PHSSIKDQHIKPQSTSKVVFKRLFFDGKKIVALKEKVNKEIMVGSFDHELQASRFMVVSSLIWGAFIAIV 244 (417)
Q Consensus 171 ---~l~~---~~~~p~~~~~~~~~~~~~~~~~f~~~~~~i~~Lk~~a~~~~~~~~~~~~~~~St~d~l~A~lW~~~~~Ar 244 (417)
.+.. +..+|.. +.+...........+.++++..++||+.|... .+|.+.++.|.+-..+.|-.
T Consensus 202 W~~~L~~~~~~~~lp~~-~~~~~~~~~~~~~~~~l~~~~~~~L~~~a~~~----------~~T~~~vllaa~a~~L~r~t 270 (1304)
T 2vsq_A 202 WREYLEGFEGQTTFAEQ-RKKQKDGYEPKELLFSPSEAETKAFTELAKSQ----------HTTLSTALQAVWSVLISRYQ 270 (1304)
T ss_dssp HHHHHTTCCCCCTTTTT-CCCSSCCCCEEEEEECCCHHHHHHHHHHHHHT----------TCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCccccCCCC-CCccccccCcceEEEecCHHHHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHhc
Confidence 0000 0111110 11111223346677889999999999998754 47889888886555555554
Q ss_pred cccc----cccccccccCCCCCCCCccceeEEEEeeeccCccCchhHHHHHHHHHHHHHhh
Q 048103 245 RERK----RAINNKFKMNPPMIPQCMGNIFRFVRAEWSLAEDDDIEVTSLVKEVIKEKRNV 301 (417)
Q Consensus 245 ~~~~----~~vd~R~rl~pplp~~Y~GN~v~~~~~~~~~~~l~~~~L~~~A~~Ir~ai~~~ 301 (417)
+.++ .+++.|..-.+.+ ++-+|+.+-....+..... +.++.++.+.|++...+.
T Consensus 271 g~~dvv~G~pvsgR~~~~~~~-~~~vG~fvntlplr~~~~~--~~s~~~ll~~v~~~~~~a 328 (1304)
T 2vsq_A 271 QSGDLAFGTVVSGRPAEIKGV-EHMVGLFINVVPRRVKLSE--GITFNGLLKRLQEQSLQS 328 (1304)
T ss_dssp TCSEEEEEEEECCCCTTSTTG-GGCCSSCCEEEEEEEECCT--TCBHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEeCCCCccchhh-hcccccceeEEEEEecCCC--CCcHHHHHHHHHHHHHHh
Confidence 5454 7888887632222 4566776655555554432 457888888888877553
No 12
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=97.18 E-value=0.0091 Score=60.69 Aligned_cols=144 Identities=8% Similarity=-0.045 Sum_probs=92.0
Q ss_pred eEEEeccccccccchhhHHHHHHHHHHHhcCCC---CcccCCCCcc----CCcccCCC----CCCCC--CC---------
Q 048103 126 DVAVGICIWHGLADGSAIFNFMKLWAEINRGVN---EKICNNVVLD----CTSLFPPH----SSIKD--QH--------- 183 (417)
Q Consensus 126 G~~lg~~~~H~v~Dg~~~~~fl~~Wa~~~rg~~---~~~~~~P~~d----r~~l~~~~----~~p~~--~~--------- 183 (417)
-.-|.+.+||.++||.|...|++.+=+...... .... .|.++ -..|.||- ..|.- .+
T Consensus 177 ~~~lv~~~~H~~~DG~g~~~f~~~ll~~L~~~~~~~~~~~-~~~~~~g~E~~~L~P~~e~~~~~p~~~~~~e~~~~~~~~ 255 (519)
T 3fot_A 177 TVEILFHSNHLFWDGIGCRKFVGDLFRLVGSYIGRSDSRE-MKKIQWGQEIKNLSPPVVDSLKLDINTLGSEFDDKCTEY 255 (519)
T ss_dssp EEEEEEEECGGGCCHHHHHHHHHHHHHHHTTSTTC-CGGG-SCCCCTTTTGGGSCCCTGGGBSSCGGGCCHHHHHHHHHH
T ss_pred eEEEEEEeCceeEchHhHHHHHHHHHHHHHhhhccCCccC-CCcCCCCcccccCCcCHHHHhCCCCCCCCHHHHHHHHHH
Confidence 577888999999999999999999887775311 0111 23332 11232221 11210 00
Q ss_pred -----------C-CC-CCCCCeEEEEEEecHHHHHHHHHHhhhhhccCCCCCCCCCcHhHHHHHHHHHHHHHHhc---c-
Q 048103 184 -----------I-KP-QSTSKVVFKRLFFDGKKIVALKEKVNKEIMVGSFDHELQASRFMVVSSLIWGAFIAIVR---E- 246 (417)
Q Consensus 184 -----------~-~~-~~~~~~~~~~f~~~~~~i~~Lk~~a~~~~~~~~~~~~~~~St~d~l~A~lW~~~~~Ar~---~- 246 (417)
. +. .....-....+.|++++.++|++.|.+. .++.+|-+.++.|.+-.++.+... .
T Consensus 256 ~~~~~~~~~~~~~P~~~~~~~~~~~~~~ls~~~t~~L~~~ck~~-------~~~g~Tvt~~l~Aa~~~al~~~~~~~~~~ 328 (519)
T 3fot_A 256 TSALVANYKSRGMKFQPGLALPRCVIHKLSADESIDIVKAVKTR-------LGPGFTISHLTQAAIVLALLDHLKPNDLS 328 (519)
T ss_dssp HHHHHHHHHSCCSBCCCCCCCEEEEEEECCHHHHHHHHHHHHHH-------TCTTCCHHHHHHHHHHHHHHHHC----CC
T ss_pred HHHhhcCCCcccCCCCCCCCCcceEEEEcCHHHHHHHHHHHHhc-------CCCCeeHHHHHHHHHHHHHHhhcCCcccC
Confidence 0 00 1112344578899999999999999876 246789999998877777665321 1
Q ss_pred -c-c----cccccccccCCCCCCCCccceeEEEEeee
Q 048103 247 -R-K----RAINNKFKMNPPMIPQCMGNIFRFVRAEW 277 (417)
Q Consensus 247 -~-~----~~vd~R~rl~pplp~~Y~GN~v~~~~~~~ 277 (417)
. . +++|+|+.+.++.-.+|+|.++.......
T Consensus 329 ~~~~~~~~~pvnlR~~l~~~~~~n~~~~~~~~~~~~v 365 (519)
T 3fot_A 329 DDEVFISPTSVDGRRWLREDIASNFYAMCQTAAVVRI 365 (519)
T ss_dssp TTCCEEEEEEEECGGGBCHHHHTSCCSCCEEEEEEEE
T ss_pred CCccEEEEeeeeccccCCCcccccccceeeeeeeeEe
Confidence 1 1 89999999976555578888877665544
No 13
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=74.88 E-value=2 Score=37.97 Aligned_cols=43 Identities=12% Similarity=0.258 Sum_probs=31.8
Q ss_pred ceeE-EEEEEEcCCe--EEEeccccccccchhhHHHHHHHHHHHhc
Q 048103 113 ELLV-VQVNYFSPGD--VAVGICIWHGLADGSAIFNFMKLWAEINR 155 (417)
Q Consensus 113 ~Pll-vQvt~f~cGG--~~lg~~~~H~v~Dg~~~~~fl~~Wa~~~r 155 (417)
.|++ +=-..-+.|. +-|+++++|.++||.-+..|++.+.+.+.
T Consensus 164 ~PIi~~G~~~~~~~~~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 209 (213)
T 3cla_A 164 APIITMAKYQQEGDRLLLPLSVQVHHAVCDGFHVARFINRLQELCN 209 (213)
T ss_dssp SCEEEEECCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHT
T ss_pred ccEEEeeEEEEECCeEEEEEEEEEcccccChHHHHHHHHHHHHHHH
Confidence 4776 4222112243 67889999999999999999999998764
No 14
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=73.74 E-value=2.2 Score=37.81 Aligned_cols=28 Identities=25% Similarity=0.451 Sum_probs=25.4
Q ss_pred EEEeccccccccchhhHHHHHHHHHHHh
Q 048103 127 VAVGICIWHGLADGSAIFNFMKLWAEIN 154 (417)
Q Consensus 127 ~~lg~~~~H~v~Dg~~~~~fl~~Wa~~~ 154 (417)
+-|++++||.++||.-+..|++.+.+.+
T Consensus 189 m~lsls~DHRvvDG~~aa~Fl~~lk~~l 216 (217)
T 2i9d_A 189 MPIAMTIHHGFIDGHHLSLFYKKVEDFL 216 (217)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEEEecchhhChHHHHHHHHHHHHHh
Confidence 5788999999999999999999998764
No 15
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=73.26 E-value=2.3 Score=37.75 Aligned_cols=29 Identities=14% Similarity=0.268 Sum_probs=26.4
Q ss_pred EEEeccccccccchhhHHHHHHHHHHHhc
Q 048103 127 VAVGICIWHGLADGSAIFNFMKLWAEINR 155 (417)
Q Consensus 127 ~~lg~~~~H~v~Dg~~~~~fl~~Wa~~~r 155 (417)
+-|+++++|.+.||.-+..|++.+.+.+.
T Consensus 185 m~lsls~DHRvvDG~~aa~Fl~~lk~~le 213 (219)
T 1q23_A 185 MPLAIQVHHAVCDGFHVGRMLNELQQYCD 213 (219)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEchhhChHHHHHHHHHHHHHHh
Confidence 67899999999999999999999998763
No 16
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=70.76 E-value=2.9 Score=37.61 Aligned_cols=29 Identities=14% Similarity=0.220 Sum_probs=27.1
Q ss_pred EEEeccccccccchhhHHHHHHHHHHHhc
Q 048103 127 VAVGICIWHGLADGSAIFNFMKLWAEINR 155 (417)
Q Consensus 127 ~~lg~~~~H~v~Dg~~~~~fl~~Wa~~~r 155 (417)
+-|+++++|.++||.-+..|++.+.+.+.
T Consensus 204 m~lsls~DHRviDGa~aa~Fl~~lk~~le 232 (239)
T 3b8k_A 204 MSVTLSCDHRVVDGAVGAQWLAEFRKYLE 232 (239)
T ss_dssp EEEEECCCCCSSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHh
Confidence 78999999999999999999999998774
No 17
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=69.55 E-value=2.6 Score=37.48 Aligned_cols=30 Identities=17% Similarity=0.234 Sum_probs=27.2
Q ss_pred EEEeccccccccchhhHHHHHHHHHHHhcC
Q 048103 127 VAVGICIWHGLADGSAIFNFMKLWAEINRG 156 (417)
Q Consensus 127 ~~lg~~~~H~v~Dg~~~~~fl~~Wa~~~rg 156 (417)
+-|+++++|.+.||.-+..|++.+.+....
T Consensus 187 m~lsls~DHRviDGa~aa~Fl~~l~~~le~ 216 (224)
T 3rqc_A 187 MYLSLSCDHRLIDGAVATRFIVDLKKVIED 216 (224)
T ss_dssp CCEEEEEETTTSCHHHHHHHHHHHHHHHTC
T ss_pred EEEEEEeccceecHHHHHHHHHHHHHHHhC
Confidence 448999999999999999999999998854
No 18
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=69.24 E-value=3.1 Score=37.48 Aligned_cols=29 Identities=14% Similarity=0.216 Sum_probs=26.9
Q ss_pred EEEeccccccccchhhHHHHHHHHHHHhc
Q 048103 127 VAVGICIWHGLADGSAIFNFMKLWAEINR 155 (417)
Q Consensus 127 ~~lg~~~~H~v~Dg~~~~~fl~~Wa~~~r 155 (417)
+-|+++++|.++||.-+..|++.+.+.+.
T Consensus 208 m~lsls~DHRviDGa~aa~Fl~~lk~~le 236 (243)
T 1dpb_A 208 LPLSLSYDCRVINGAAAARFTKRLGDLLA 236 (243)
T ss_dssp EEEEEEEETTTSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECcccccHHHHHHHHHHHHHHHh
Confidence 57999999999999999999999998874
No 19
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=69.02 E-value=3.2 Score=37.16 Aligned_cols=30 Identities=20% Similarity=0.282 Sum_probs=27.2
Q ss_pred EEEeccccccccchhhHHHHHHHHHHHhcC
Q 048103 127 VAVGICIWHGLADGSAIFNFMKLWAEINRG 156 (417)
Q Consensus 127 ~~lg~~~~H~v~Dg~~~~~fl~~Wa~~~rg 156 (417)
+-|+++++|.+.||.-+..|++.+.+.+..
T Consensus 196 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 225 (233)
T 1scz_A 196 MYLALSYDHRLIDGRESVGFLVTIKELLED 225 (233)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHhC
Confidence 569999999999999999999999998753
No 20
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=67.41 E-value=3.6 Score=37.58 Aligned_cols=29 Identities=24% Similarity=0.451 Sum_probs=26.7
Q ss_pred EEEeccccccccchhhHHHHHHHHHHHhc
Q 048103 127 VAVGICIWHGLADGSAIFNFMKLWAEINR 155 (417)
Q Consensus 127 ~~lg~~~~H~v~Dg~~~~~fl~~Wa~~~r 155 (417)
+-|+++++|.++||.-+..|++.+.+.+.
T Consensus 224 m~lsls~DHRviDGa~aa~Fl~~lk~~Le 252 (262)
T 2ii3_A 224 MNVSWSADHRIIDGATVSRFSNLWKSYLE 252 (262)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEECcceecHHHHHHHHHHHHHHHh
Confidence 56899999999999999999999998874
No 21
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=61.96 E-value=5.2 Score=36.31 Aligned_cols=30 Identities=20% Similarity=0.182 Sum_probs=27.4
Q ss_pred EEEeccccccccchhhHHHHHHHHHHHhcC
Q 048103 127 VAVGICIWHGLADGSAIFNFMKLWAEINRG 156 (417)
Q Consensus 127 ~~lg~~~~H~v~Dg~~~~~fl~~Wa~~~rg 156 (417)
+-|+++++|.+.||.-+..|++.+.+.+..
T Consensus 210 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 239 (256)
T 3mae_A 210 VNLCLSIDHRILDGLLAGKFLQAIKANVEK 239 (256)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEEccccccHHHHHHHHHHHHHHHhC
Confidence 459999999999999999999999999864
No 22
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=60.67 E-value=5.7 Score=35.92 Aligned_cols=30 Identities=17% Similarity=0.292 Sum_probs=27.4
Q ss_pred EEEeccccccccchhhHHHHHHHHHHHhcC
Q 048103 127 VAVGICIWHGLADGSAIFNFMKLWAEINRG 156 (417)
Q Consensus 127 ~~lg~~~~H~v~Dg~~~~~fl~~Wa~~~rg 156 (417)
+-|+++++|.+.||.-+..|++.+.+....
T Consensus 205 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 234 (250)
T 3l60_A 205 MTLTCVFDHRVVDGAQVAQFMCELRDLIES 234 (250)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHS
T ss_pred eEEEEEecccccCHHHHHHHHHHHHHHHhC
Confidence 468999999999999999999999998854
No 23
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=41.82 E-value=5.4 Score=39.12 Aligned_cols=29 Identities=14% Similarity=0.209 Sum_probs=0.0
Q ss_pred EEeccccccccchhhHHHHHHHHHHHhcC
Q 048103 128 AVGICIWHGLADGSAIFNFMKLWAEINRG 156 (417)
Q Consensus 128 ~lg~~~~H~v~Dg~~~~~fl~~Wa~~~rg 156 (417)
-|+++++|.++||.-+..|++.+.+.+..
T Consensus 392 ~lsls~DHRviDG~~aa~Fl~~lk~~Le~ 420 (428)
T 3dva_I 392 ALSLSFDHRMIDGATAQKALNHIKRLLSD 420 (428)
T ss_dssp -----------------------------
T ss_pred EEEEEecccccchHHHHHHHHHHHHHHhC
Confidence 59999999999999999999999988753
No 24
>1x93_A Hypothetical protein HP0222; JHP0208, transcription, regula METJ, MNT, PArg, COPG, REPA; NMR {Helicobacter pylori} SCOP: a.43.1.3
Probab=41.38 E-value=36 Score=22.07 Aligned_cols=22 Identities=23% Similarity=0.369 Sum_probs=19.2
Q ss_pred EEEEEEecHHHHHHHHHHhhhh
Q 048103 193 VFKRLFFDGKKIVALKEKVNKE 214 (417)
Q Consensus 193 ~~~~f~~~~~~i~~Lk~~a~~~ 214 (417)
....|+|+.++-+.|++.|.++
T Consensus 2 ~~Vs~Y~SkEey~~L~klA~eE 23 (55)
T 1x93_A 2 RAVSLYFSDEQYQKLEKMANEE 23 (55)
T ss_dssp EEEEEEECHHHHHHHHHHHHHT
T ss_pred ceEEEEecHHHHHHHHHHHHHH
Confidence 3568999999999999999876
No 25
>2xl1_A Arginine attenuator peptide; translation, antibiotic, ribosome, cytomegalovirus; NMR {Neurospora crassa}
Probab=40.62 E-value=21 Score=19.13 Aligned_cols=19 Identities=21% Similarity=0.200 Sum_probs=15.7
Q ss_pred CCCcHhHHHHHHHHHHHHH
Q 048103 224 LQASRFMVVSSLIWGAFIA 242 (417)
Q Consensus 224 ~~~St~d~l~A~lW~~~~~ 242 (417)
+-+++.|-|+-|+||++..
T Consensus 6 svftsqdylsdhlwralna 24 (26)
T 2xl1_A 6 SVFTSQDYLSDHLWRALNA 24 (26)
T ss_pred ceeecHHHHHHHHHHHHhc
Confidence 4578899999999998763
No 26
>2k1o_A Putative; repressor, transcriptional regulator, D binding, ribbon-helix-helix, HP0564, JHP0511, unknown funct regulation; NMR {Helicobacter pylori}
Probab=35.07 E-value=73 Score=21.39 Aligned_cols=42 Identities=10% Similarity=0.168 Sum_probs=30.2
Q ss_pred CCeEEEEEEecHHHHHHHHHHhhhhhccCCCCCCCCCcHhHHHHHHHHHHHHHHhc
Q 048103 190 SKVVFKRLFFDGKKIVALKEKVNKEIMVGSFDHELQASRFMVVSSLIWGAFIAIVR 245 (417)
Q Consensus 190 ~~~~~~~f~~~~~~i~~Lk~~a~~~~~~~~~~~~~~~St~d~l~A~lW~~~~~Ar~ 245 (417)
.+.....|+|+.++-+.|++.|.++ -|.+..+|=|.+.++..
T Consensus 13 k~~~~Vs~Y~SkEey~~L~klA~eE--------------~eSV~sfIKR~IlK~l~ 54 (66)
T 2k1o_A 13 KRNFSVTFYLSKEEHDVLRRLADEE--------------VESVNSFVKRHILKTII 54 (66)
T ss_dssp CCCEEEEEEEEHHHHHHHHHHHHTT--------------CSCHHHHHHHHHHHHHC
T ss_pred ccceEEEEEecHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHH
Confidence 3556779999999999999999865 23345556666666543
No 27
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=20.69 E-value=55 Score=36.14 Aligned_cols=30 Identities=10% Similarity=0.169 Sum_probs=27.0
Q ss_pred EEEeccccccccchhhHHHHHHHHHHHhcC
Q 048103 127 VAVGICIWHGLADGSAIFNFMKLWAEINRG 156 (417)
Q Consensus 127 ~~lg~~~~H~v~Dg~~~~~fl~~Wa~~~rg 156 (417)
+-|+++++|.|.||.-+..|++.+.+.+..
T Consensus 192 m~lsls~DHRviDGa~aa~FL~~lk~~Le~ 221 (1113)
T 2xt6_A 192 ITLTSTYDHRIIQGAESGDFLRTIHQLLLD 221 (1113)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHTTC
T ss_pred eEEEEEECcceechHHHHHHHHHHHHHHhC
Confidence 779999999999999999999998887753
Done!