BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 048104
         (316 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|1RH9|A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon
           Esculentum (Tomato)
          Length = 373

 Score =  358 bits (918), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 169/292 (57%), Positives = 222/292 (76%), Gaps = 5/292 (1%)

Query: 1   GLDFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAGASVNSDDDFYTNAIVKGYY 60
           GLDFV SEA+KYGI LI+SL NN+  FGG+ QYV WA   G  + SDDDF+TN +VKG+Y
Sbjct: 86  GLDFVISEAKKYGIHLIMSLVNNWDAFGGKKQYVEWAVQRGQKLTSDDDFFTNPMVKGFY 145

Query: 61  KNHVKKVLTRINTITRIAYKDDPTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSID 120
           KN+VK VLTR+NTIT++AYKDDPTI++WELINEPRC +D SGKT  NWV EMA Y+KSID
Sbjct: 146 KNNVKVVLTRVNTITKVAYKDDPTILSWELINEPRCPSDLSGKTFQNWVLEMAGYLKSID 205

Query: 121 NKHLLEIGLEGFYGDSIPDKKQFNP-GYQVGTDFISNNMIKEIDFTTIHAYPDQWLPGKN 179
           + HLLEIGLEGFYG+   D +Q+NP  Y  GT+FISNN ++ IDFTTIH YP+QWLPG  
Sbjct: 206 SNHLLEIGLEGFYGN---DMRQYNPNSYIFGTNFISNNQVQGIDFTTIHMYPNQWLPGLT 262

Query: 180 YYAQMQFVQKWLESHWTDSKTILKKPLVFSEFGKSCKEAGFSINVRDSFLNTIYMNIYNL 239
             AQ ++  +W++ H  DSK +LKKPL+ +EFGKS K  G+++  RD++   IY  I+N 
Sbjct: 263 QEAQDKWASQWIQVHIDDSK-MLKKPLLIAEFGKSTKTPGYTVAKRDNYFEKIYGTIFNC 321

Query: 240 ARNGGAIGGGMVWQLMAEGMQPYFDGYEIVLSQNPSTRSVIAQQSNKMTALA 291
           A++GG  GGG+ WQ++ +GM  + DGY++VL ++PST  VI  QS +++ L+
Sbjct: 322 AKSGGPCGGGLFWQVLGQGMSSFDDGYQVVLQESPSTSRVILLQSLRLSKLS 373


>pdb|3PZ9|A Chain A, Native Structure Of Endo-1,4-Beta-D-Mannanase From
           Thermotoga Petrophila Rku-1
 pdb|3PZG|A Chain A, I222 Crystal Form Of The Hyperthermostable
           Endo-1,4-Beta-D-Mannanase From Thermotoga Petrophila
           Rku-1
 pdb|3PZI|A Chain A, Structure Of The Hyperthermostable
           Endo-1,4-Beta-D-Mannanase From Thermotoga Petrophila
           Rku-1 In Complex With Beta-D-Glucose
 pdb|3PZM|A Chain A, Structure Of The Hyperthermostable
           Endo-1,4-Beta-D-Mannanase From Thermotoga Petrophila
           Rku-1 With Three Glycerol Molecules
 pdb|3PZN|A Chain A, Structure Of The Hyperthermostable
           Endo-1,4-Beta-D-Mannanase From Thermotoga Petrophila
           Rku-1 With Citrate And Glycerol
 pdb|3PZO|A Chain A, Structure Of The Hyperthermostable
           Endo-1,4-Beta-D-Mannanase From Thermotoga Petrophila
           Rku-1 In Complex With Three Maltose Molecules
 pdb|3PZQ|A Chain A, Structure Of The Hyperthermostable
           Endo-1,4-Beta-D-Mannanase From Thermotoga Petrophila
           Rku-1 With Maltose And Glycerol
          Length = 383

 Score =  159 bits (403), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/297 (35%), Positives = 150/297 (50%), Gaps = 41/297 (13%)

Query: 2   LDFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAGASVNSDDDFYTNAIVKGYYK 61
           LD+  ++A++ GI+LI+ L NN+ DFGG  QYV W           DDFY +  +K  YK
Sbjct: 102 LDYTIAKAKELGIKLIIVLVNNWDDFGGMNQYVRWFGGT-----HHDDFYRDERIKEEYK 156

Query: 62  NHVKKVLTRINTITRIAYKDDPTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDN 121
            +V  ++  +N  T + Y+++PTIMAWEL NE RC+ D SG TL  WV+EM+SY+KS+D 
Sbjct: 157 KYVSFLINHVNVYTGVPYREEPTIMAWELANELRCETDKSGNTLVEWVKEMSSYIKSLDP 216

Query: 122 KHLLEIGLEGFYGDSIPDKKQFNP----------GYQVGTDFISNNMIKEIDFTTIHAYP 171
            HL+ +G EGF+ +     + F P          G+  G D+     I+ +DF T H YP
Sbjct: 217 NHLVAVGDEGFFSNY----EGFKPYGGEAEWAYNGWS-GVDWKKLLSIETVDFGTFHLYP 271

Query: 172 DQWLPGKNYYAQMQFVQKWLESHWTDSKTILKKPLVFSEFGKSCKEAGFSINVRDSFLNT 231
             W      YA  Q+  KW+E H   +K I  KP+V  E+G   K A  +        N 
Sbjct: 272 SHWGVSPENYA--QWGAKWIEDHIKIAKEI-GKPVVLEEYGIP-KSAPVNRTAIYRLWND 327

Query: 232 IYMNIYNLARNGGAIGGGMVWQLMA---------EGMQPYFDGYEIVLSQNPSTRSV 279
           +   +Y+L  +     G M W L            G  P +DG+ IV   +P    +
Sbjct: 328 L---VYDLGGD-----GAMFWMLAGIGEGSDRDERGYYPDYDGFRIVNDDSPEAELI 376


>pdb|1QNO|A Chain A, The 3-d Structure Of A Trichoderma Reesei B-mannanase From
           Glycoside Hydrolase Family 5
 pdb|1QNP|A Chain A, The 3-d Structure Of A Trichoderma Reesei B-mannanase From
           Glycoside Hydrolase Family 5
 pdb|1QNQ|A Chain A, The 3-d Structure Of A Trichoderma Reesei B-mannanase From
           Glycoside Hydrolase Family 5
 pdb|1QNR|A Chain A, The 3-d Structure Of A Trichoderma Reesei B-mannanase From
           Glycoside Hydrolase Family 5
 pdb|1QNS|A Chain A, The 3-d Structure Of A Trichoderma Reesei B-mannanase From
           Glycoside Hydrolase Family 5
          Length = 344

 Score =  122 bits (307), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/270 (32%), Positives = 127/270 (47%), Gaps = 39/270 (14%)

Query: 2   LDFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAGASVNSDDDFYTNAIVKGYYK 61
           LD+V   A ++ ++LI+   NN+ D+GG   YVN   A G +  +   +YTN   +  Y+
Sbjct: 92  LDYVVQSAEQHNLKLIIPFVNNWSDYGGINAYVN---AFGGNATT---WYTNTAAQTQYR 145

Query: 62  NHVKKVLTRINTITRIAYKDDPTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDN 121
            +V+ V++R        Y +   I AWEL NEPRC    S   +  W   ++ YVKS+D+
Sbjct: 146 KYVQAVVSR--------YANSTAIFAWELGNEPRCNG-CSTDVIVQWATSVSQYVKSLDS 196

Query: 122 KHLLEIGLEGFYGDSIPDKKQFNPGYQVGTDFISNNMIKEIDFTTIHAYPDQWLPGKNYY 181
            HL+ +G EG  G S  D   +   Y  GTDF  N  IK +DF T H YPD W  G NY 
Sbjct: 197 NHLVTLGDEGL-GLSTGDGA-YPYTYGEGTDFAKNVQIKSLDFGTFHLYPDSW--GTNY- 251

Query: 182 AQMQFVQKWLESHWTDSKTILKKPLVFSEFGKSCKEAGFSINVRDSFLNTIYMNIYNLAR 241
               +   W+++H   +     KP VF E+G            ++   N       +L  
Sbjct: 252 ---TWGNGWIQTH-AAACLAAGKPCVFEEYGAQ----------QNPCTNEAPWQTTSLTT 297

Query: 242 NGGAIGGGMVWQ---LMAEGMQPYFDGYEI 268
            G  +GG M WQ     A G Q   D Y +
Sbjct: 298 RG--MGGDMFWQWGDTFANGAQSNSDPYTV 325


>pdb|4AWE|A Chain A, The Crystal Structure Of Chrysonilia Sitophila
           Endo-Beta-D- 1,4-Mannanase
          Length = 387

 Score =  118 bits (295), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 110/222 (49%), Gaps = 32/222 (14%)

Query: 2   LDFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAGASVNSDDDFYTNAIVKGYYK 61
            D V   A K GI+LI++L+NN+ D+GG   Y              DDFYT   +K  +K
Sbjct: 103 FDKVVDSATKTGIKLIVALTNNWADYGGMDVYT-----VNLGGKYHDDFYTVPKIKEAFK 157

Query: 62  NHVKKVLTRINTITRIAYKDDPTIMAWELINEPRCQAD-----------YSGKTLNNWVQ 110
            +VK ++TR        Y+D   I+AWEL NE RC AD            + +T+  W++
Sbjct: 158 RYVKAMVTR--------YRDSEAILAWELANEARCGADGTRNLPRSEKGCTTETVTGWIE 209

Query: 111 EMASYVKSIDNKHLLEIGLEGFYGDSIPDKKQFNPGYQVGTDFISNNMIKEIDFTTIHAY 170
           EM++YVKS+D  HL+  G EG +     ++  F  G   G DF     ++ +DF T+H Y
Sbjct: 210 EMSAYVKSLDGNHLVTWGGEGGFNRGEDEEDGFYNGAD-GGDFDRELGLRNVDFGTMHLY 268

Query: 171 PDQWLPGKNYYAQMQFVQKWLESHWTDSKTILKKPLVFSEFG 212
           PD W         +++  +W+  H   S     KP+V  E+G
Sbjct: 269 PDWWSK------SIEWSNQWIHDH-AASGRAANKPVVLEEYG 303


>pdb|1UUQ|A Chain A, Exo-mannosidase From Cellvibrio Mixtus
 pdb|1UZ4|A Chain A, Common Inhibition Of Beta-Glucosidase And Beta-Mannosidase
           By Isofagomine Lactam Reflects Different Conformational
           Intineraries For Glucoside And Mannoside Hydrolysis
          Length = 440

 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 119/260 (45%), Gaps = 33/260 (12%)

Query: 1   GLDFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAG-----------ASVNSDDD 49
           GLD++  E  K  + ++L  +N +   GG  QY+ W                A +     
Sbjct: 112 GLDYLLVELAKRDMTVVLYFNNFWQWSGGMTQYMAWIEGEPVQDPNVTNEWEAFMAKSAS 171

Query: 50  FYTNAIVKGYYKNHVKKVLTRINTITRIAYKDDPTIMAWELINEPR---CQADYSGKTLN 106
           FY +   +  Y+  ++K++TR+N+I   AY DD TIM+W+L NEPR    Q     K + 
Sbjct: 172 FYRSEKAQQEYRKTLEKIITRVNSINGKAYVDDATIMSWQLANEPRPGNSQTTAEEKQIY 231

Query: 107 -NWVQEMASYVKSIDNKHLLEIGLEGFYGDSIPDKKQFNPGYQVGTDFISNNMIKEIDFT 165
            +WV   A+Y+K++D  HL+  G EG  G S+ D +           FI  +   +ID+ 
Sbjct: 232 IDWVHAAAAYIKTLDAHHLVSSGSEGEMG-SVNDMQV----------FIDAHATPDIDYL 280

Query: 166 TIHAYPDQWL------PGKNYYAQMQFVQKWLESHWTDSKTILKKPLVFSEFGKSCKEAG 219
           T H +   W       P + + +  +  Q ++ +H  D    L KPLV  EFG       
Sbjct: 281 TYHMWIRNWSWFDKTKPAETWPSAWEKAQNYMRAH-IDVAKQLNKPLVLEEFGLDRDMGS 339

Query: 220 FSINVRDSFLNTIYMNIYNL 239
           ++++    + +  +  ++ L
Sbjct: 340 YAMDSTTEYRDNYFRGVFEL 359


>pdb|3MMU|A Chain A, Crystal Structure Of Endoglucanase Cel5a From The
           Hyperthermophilic Thermotoga Maritima
 pdb|3MMU|B Chain B, Crystal Structure Of Endoglucanase Cel5a From The
           Hyperthermophilic Thermotoga Maritima
 pdb|3MMU|C Chain C, Crystal Structure Of Endoglucanase Cel5a From The
           Hyperthermophilic Thermotoga Maritima
 pdb|3MMU|D Chain D, Crystal Structure Of Endoglucanase Cel5a From The
           Hyperthermophilic Thermotoga Maritima
 pdb|3MMU|E Chain E, Crystal Structure Of Endoglucanase Cel5a From The
           Hyperthermophilic Thermotoga Maritima
 pdb|3MMU|F Chain F, Crystal Structure Of Endoglucanase Cel5a From The
           Hyperthermophilic Thermotoga Maritima
 pdb|3MMU|G Chain G, Crystal Structure Of Endoglucanase Cel5a From The
           Hyperthermophilic Thermotoga Maritima
 pdb|3MMU|H Chain H, Crystal Structure Of Endoglucanase Cel5a From The
           Hyperthermophilic Thermotoga Maritima
 pdb|3MMW|A Chain A, Crystal Structure Of Endoglucanase Cel5a From The
           Hyperthermophilic Thermotoga Maritima
 pdb|3MMW|B Chain B, Crystal Structure Of Endoglucanase Cel5a From The
           Hyperthermophilic Thermotoga Maritima
 pdb|3MMW|C Chain C, Crystal Structure Of Endoglucanase Cel5a From The
           Hyperthermophilic Thermotoga Maritima
 pdb|3MMW|D Chain D, Crystal Structure Of Endoglucanase Cel5a From The
           Hyperthermophilic Thermotoga Maritima
 pdb|3AMC|A Chain A, Crystal Structures Of Thermotoga Maritima Cel5a, Apo Form
           And DimerAU
 pdb|3AMC|B Chain B, Crystal Structures Of Thermotoga Maritima Cel5a, Apo Form
           And DimerAU
 pdb|3AMD|A Chain A, Crystal Structures Of Thermotoga Maritima Cel5a, Apo Form
           And TetramerAU
 pdb|3AMD|B Chain B, Crystal Structures Of Thermotoga Maritima Cel5a, Apo Form
           And TetramerAU
 pdb|3AMD|C Chain C, Crystal Structures Of Thermotoga Maritima Cel5a, Apo Form
           And TetramerAU
 pdb|3AMD|D Chain D, Crystal Structures Of Thermotoga Maritima Cel5a, Apo Form
           And TetramerAU
          Length = 317

 Score = 36.2 bits (82), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 34/149 (22%), Positives = 66/149 (44%), Gaps = 30/149 (20%)

Query: 79  YKDDPTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLLEIGLEGFYGDSIP 138
           YKD P  + +E++NEP    + + +  N  ++E    ++SID KH + IG   + G S  
Sbjct: 122 YKDYPETLFFEILNEP--HGNLTPEKWNELLEEALKVIRSIDKKHTIIIGTAEWGGISAL 179

Query: 139 DKKQFNPGYQVGTDFISNNMIKEIDFTTIHAYPDQWLPG---------------KNYYAQ 183
           +K    P ++  +  ++ +     +FT   A   +W+ G               K+   +
Sbjct: 180 EKLSV-PKWEKNS-IVTIHYYNPFEFTHQGA---EWVEGSEKWLGRKWGSPDDQKHLIEE 234

Query: 184 MQFVQKWLESHWTDSKTILKKPLVFSEFG 212
             F+++W + +        K+P+   EFG
Sbjct: 235 FNFIEEWSKKN--------KRPIYIGEFG 255


>pdb|3AZR|A Chain A, Diverse Substrates Recognition Mechanism Revealed By
           Thermotoga Maritima Cel5a Structures In Complex With
           Cellobiose
 pdb|3AZR|B Chain B, Diverse Substrates Recognition Mechanism Revealed By
           Thermotoga Maritima Cel5a Structures In Complex With
           Cellobiose
 pdb|3AZS|A Chain A, Diverse Substrates Recognition Mechanism Revealed By
           Thermotoga Maritima Cel5a Structures In Complex With
           Mannotriose
 pdb|3AZS|B Chain B, Diverse Substrates Recognition Mechanism Revealed By
           Thermotoga Maritima Cel5a Structures In Complex With
           Mannotriose
 pdb|3AZT|A Chain A, Diverse Substrates Recognition Mechanism Revealed By
           Thermotoga Maritima Cel5a Structures In Complex With
           Cellotetraose
 pdb|3AZT|B Chain B, Diverse Substrates Recognition Mechanism Revealed By
           Thermotoga Maritima Cel5a Structures In Complex With
           Cellotetraose
 pdb|3AZT|C Chain C, Diverse Substrates Recognition Mechanism Revealed By
           Thermotoga Maritima Cel5a Structures In Complex With
           Cellotetraose
 pdb|3AZT|D Chain D, Diverse Substrates Recognition Mechanism Revealed By
           Thermotoga Maritima Cel5a Structures In Complex With
           Cellotetraose
          Length = 317

 Score = 35.8 bits (81), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 19/141 (13%)

Query: 79  YKDDPTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLLEIGLEGFYGDSIP 138
           YKD P  + +E++NEP    + + +  N  ++E    ++SID KH + IG   + G S  
Sbjct: 122 YKDYPETLFFEILNEP--HGNLTPEKWNELLEEALKVIRSIDKKHTIIIGTAEWGGISAL 179

Query: 139 DKKQFNPGYQVGTDFISNNMIKEIDFTTIHAYPDQWLPGKNYYAQMQFVQKWLESHW--- 195
           +K    P ++  +  ++ +     +FT   A   +W+ G          +KWL   W   
Sbjct: 180 EKLSV-PKWEKNS-IVTIHYYNPFEFTHQGA---EWVEGS---------EKWLGRKWGSP 225

Query: 196 TDSKTILKKPLVFSEFGKSCK 216
            D K ++++     E+ K  K
Sbjct: 226 DDQKHLIEEFNFIEEWSKKNK 246


>pdb|3AOF|A Chain A, Crystal Structures Of Thermotoga Maritima Cel5a In Complex
           With Mannotriose Substrate
 pdb|3AOF|B Chain B, Crystal Structures Of Thermotoga Maritima Cel5a In Complex
           With Mannotriose Substrate
          Length = 317

 Score = 34.3 bits (77), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 33/149 (22%), Positives = 65/149 (43%), Gaps = 30/149 (20%)

Query: 79  YKDDPTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLLEIGLEGFYGDSIP 138
           YKD P  + +E++N P    + + +  N  ++E    ++SID KH + IG   + G S  
Sbjct: 122 YKDYPETLFFEILNAP--HGNLTPEKWNELLEEALKVIRSIDKKHTIIIGTAEWGGISAL 179

Query: 139 DKKQFNPGYQVGTDFISNNMIKEIDFTTIHAYPDQWLPG---------------KNYYAQ 183
           +K    P ++  +  ++ +     +FT   A   +W+ G               K+   +
Sbjct: 180 EKLSV-PKWEKNS-IVTIHYYNPFEFTHQGA---EWVEGSEKWLGRKWGSPDDQKHLIEE 234

Query: 184 MQFVQKWLESHWTDSKTILKKPLVFSEFG 212
             F+++W + +        K+P+   EFG
Sbjct: 235 FNFIEEWSKKN--------KRPIYIGEFG 255


>pdb|3AMG|A Chain A, Crystal Structures Of Thermotoga Maritima Cel5a In Complex
           With Cellobiose Substrate, Mutant Form
 pdb|3AMG|B Chain B, Crystal Structures Of Thermotoga Maritima Cel5a In Complex
           With Cellobiose Substrate, Mutant Form
          Length = 317

 Score = 33.9 bits (76), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 33/149 (22%), Positives = 65/149 (43%), Gaps = 30/149 (20%)

Query: 79  YKDDPTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLLEIGLEGFYGDSIP 138
           YKD P  + +E++N P    + + +  N  ++E    ++SID KH + IG   + G S  
Sbjct: 122 YKDYPETLFFEILNAP--HGNLTPEKWNELLEEALKVIRSIDKKHTIIIGTAEWGGISAL 179

Query: 139 DKKQFNPGYQVGTDFISNNMIKEIDFTTIHAYPDQWLPG---------------KNYYAQ 183
           +K    P ++  +  ++ +     +FT   A   +W+ G               K+   +
Sbjct: 180 EKLSV-PKWEKNS-IVTIHYYNPFEFTHQGA---EWVEGSEKWLGRKWGSPDDQKHLIEE 234

Query: 184 MQFVQKWLESHWTDSKTILKKPLVFSEFG 212
             F+++W + +        K+P+   EFG
Sbjct: 235 FNFIEEWSKKN--------KRPIYIGEFG 255


>pdb|2R6X|A Chain A, Structure Of A D35n Variant Pduo-type Atp:co(i)rrinoid
           Adenosyltransferase From Lactobacillus Reuteri Complexed
           With Atp
 pdb|2R6X|B Chain B, Structure Of A D35n Variant Pduo-type Atp:co(i)rrinoid
           Adenosyltransferase From Lactobacillus Reuteri Complexed
           With Atp
          Length = 194

 Score = 28.9 bits (63), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 17/69 (24%)

Query: 55  IVKGYYKNHVKKVLTRINTITRIAYKDDPTIMAWELINEPRCQADYSGKTLNNWVQEMAS 114
           +VK Y KN   K  TRI    +I YK+DP + A+  +NE           LN+WV     
Sbjct: 6   MVKIYTKNG-DKGQTRI-IGKQILYKNDPRVAAYGEVNE-----------LNSWV----G 48

Query: 115 YVKSIDNKH 123
           Y KS+ N H
Sbjct: 49  YTKSLINSH 57


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.319    0.135    0.413 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,446,847
Number of Sequences: 62578
Number of extensions: 457729
Number of successful extensions: 1309
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 1278
Number of HSP's gapped (non-prelim): 24
length of query: 316
length of database: 14,973,337
effective HSP length: 99
effective length of query: 217
effective length of database: 8,778,115
effective search space: 1904850955
effective search space used: 1904850955
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.3 bits)