Query 048104
Match_columns 316
No_of_seqs 206 out of 1173
Neff 7.5
Searched_HMMs 46136
Date Fri Mar 29 06:18:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048104.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/048104hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG3934 Endo-beta-mannanase [C 100.0 6.6E-32 1.4E-36 256.4 9.0 230 2-275 69-308 (587)
2 PF00150 Cellulase: Cellulase 99.9 1E-23 2.3E-28 193.6 16.9 206 2-257 64-280 (281)
3 PRK10150 beta-D-glucuronidase; 99.8 2.2E-16 4.7E-21 161.2 24.1 224 3-272 339-578 (604)
4 PF02449 Glyco_hydro_42: Beta- 99.6 2E-14 4.3E-19 138.8 17.3 243 2-289 49-373 (374)
5 PF12876 Cellulase-like: Sugar 99.6 1.1E-15 2.5E-20 117.7 5.9 79 67-170 1-88 (88)
6 PF02836 Glyco_hydro_2_C: Glyc 99.4 9.5E-12 2.1E-16 116.5 16.8 98 3-130 62-159 (298)
7 smart00633 Glyco_10 Glycosyl h 99.4 2.7E-11 5.8E-16 111.0 15.9 205 2-263 18-233 (254)
8 PF07745 Glyco_hydro_53: Glyco 99.3 7.3E-11 1.6E-15 111.6 14.8 207 2-253 57-295 (332)
9 PRK10340 ebgA cryptic beta-D-g 99.3 1.7E-10 3.8E-15 123.9 17.9 137 50-259 414-550 (1021)
10 PRK09525 lacZ beta-D-galactosi 99.2 4.4E-10 9.5E-15 120.8 18.0 149 50-259 427-576 (1027)
11 TIGR03356 BGL beta-galactosida 99.1 3.3E-09 7.3E-14 104.2 18.6 240 2-271 96-411 (427)
12 COG2730 BglC Endoglucanase [Ca 99.0 6.7E-09 1.4E-13 101.5 14.2 106 2-129 118-228 (407)
13 PRK13511 6-phospho-beta-galact 98.8 4.9E-07 1.1E-11 90.0 20.9 238 3-271 97-443 (469)
14 PLN02814 beta-glucosidase 98.8 6.1E-07 1.3E-11 89.9 21.3 233 3-266 120-449 (504)
15 PRK09593 arb 6-phospho-beta-gl 98.8 3.1E-07 6.7E-12 91.5 18.8 240 3-272 117-446 (478)
16 PLN02998 beta-glucosidase 98.8 2.8E-07 6.1E-12 92.1 17.7 239 3-271 125-463 (497)
17 PRK09589 celA 6-phospho-beta-g 98.8 5.3E-07 1.1E-11 89.8 19.2 241 3-271 111-444 (476)
18 PF00331 Glyco_hydro_10: Glyco 98.8 4.1E-07 8.8E-12 86.3 17.5 210 2-262 61-291 (320)
19 TIGR01233 lacG 6-phospho-beta- 98.7 6.8E-07 1.5E-11 88.9 18.2 239 3-272 96-442 (467)
20 PRK15014 6-phospho-beta-glucos 98.7 1.1E-06 2.4E-11 87.5 19.0 241 3-271 113-445 (477)
21 PLN02849 beta-glucosidase 98.7 1.7E-06 3.6E-11 86.7 19.8 238 3-271 122-458 (503)
22 PRK09852 cryptic 6-phospho-bet 98.7 1.7E-06 3.7E-11 86.1 19.2 241 2-272 114-442 (474)
23 PF00232 Glyco_hydro_1: Glycos 98.7 1.1E-07 2.3E-12 94.4 9.8 229 3-266 102-420 (455)
24 PF11790 Glyco_hydro_cc: Glyco 98.5 1.6E-06 3.4E-11 78.9 12.6 83 153-254 128-211 (239)
25 COG3867 Arabinogalactan endo-1 98.5 6.1E-06 1.3E-10 75.9 15.6 204 5-253 109-341 (403)
26 PF01229 Glyco_hydro_39: Glyco 98.4 2.6E-06 5.5E-11 85.3 12.5 233 2-273 86-347 (486)
27 COG2723 BglB Beta-glucosidase/ 98.4 4.3E-05 9.4E-10 74.9 20.1 228 3-257 103-413 (460)
28 PF13204 DUF4038: Protein of u 98.4 3.5E-06 7.6E-11 78.8 11.4 155 2-216 90-246 (289)
29 COG3934 Endo-beta-mannanase [C 98.2 8.7E-09 1.9E-13 99.5 -9.2 278 2-291 135-469 (587)
30 PF03198 Glyco_hydro_72: Gluca 98.1 9.9E-05 2.1E-09 68.9 15.1 205 3-270 82-290 (314)
31 COG3693 XynA Beta-1,4-xylanase 97.9 0.00046 1E-08 64.5 15.2 101 2-128 84-192 (345)
32 COG5309 Exo-beta-1,3-glucanase 97.8 0.0018 3.9E-08 59.0 15.8 135 79-234 128-267 (305)
33 COG3250 LacZ Beta-galactosidas 97.6 0.00027 5.8E-09 74.4 9.5 63 52-131 373-435 (808)
34 PF14488 DUF4434: Domain of un 97.4 0.0013 2.9E-08 56.5 10.0 94 2-129 67-161 (166)
35 KOG0626 Beta-glucosidase, lact 97.2 0.019 4.1E-07 57.3 16.4 67 4-96 137-204 (524)
36 PF01301 Glyco_hydro_35: Glyco 96.9 0.015 3.3E-07 55.1 12.8 111 2-128 65-181 (319)
37 PF02638 DUF187: Glycosyl hydr 96.8 0.024 5.3E-07 53.6 12.8 161 2-172 72-263 (311)
38 PF14587 Glyco_hydr_30_2: O-Gl 96.8 0.29 6.3E-06 47.4 20.1 228 4-266 108-366 (384)
39 PF03662 Glyco_hydro_79n: Glyc 96.6 0.00064 1.4E-08 64.2 0.7 20 2-21 111-130 (319)
40 COG1874 LacA Beta-galactosidas 96.4 0.016 3.6E-07 59.8 9.2 110 2-122 69-192 (673)
41 cd06545 GH18_3CO4_chitinase Th 95.1 0.98 2.1E-05 41.1 14.8 92 2-129 48-139 (253)
42 COG3534 AbfA Alpha-L-arabinofu 94.8 0.24 5.2E-06 48.6 10.2 137 1-173 106-247 (501)
43 PF13200 DUF4015: Putative gly 94.8 3.8 8.2E-05 38.9 17.9 157 2-176 63-232 (316)
44 COG5520 O-Glycosyl hydrolase [ 94.4 1.7 3.7E-05 41.6 14.4 159 55-256 146-311 (433)
45 PF02055 Glyco_hydro_30: O-Gly 93.7 1.4 3.1E-05 44.3 13.3 173 54-264 200-391 (496)
46 PF12891 Glyco_hydro_44: Glyco 92.8 0.24 5.2E-06 44.9 5.7 57 62-126 108-176 (239)
47 PLN03059 beta-galactosidase; P 92.6 0.97 2.1E-05 48.0 10.5 104 2-115 100-211 (840)
48 PRK10785 maltodextrin glucosid 92.4 0.51 1.1E-05 48.7 8.2 116 2-128 228-371 (598)
49 KOG2230 Predicted beta-mannosi 91.4 1.1 2.4E-05 45.3 8.8 81 2-96 359-447 (867)
50 cd02875 GH18_chitobiase Chitob 90.4 3 6.5E-05 40.2 10.8 92 3-129 67-158 (358)
51 TIGR01515 branching_enzym alph 89.0 2.5 5.4E-05 43.8 9.7 125 2-127 208-347 (613)
52 PF01120 Alpha_L_fucos: Alpha- 87.5 7.1 0.00015 37.4 11.1 100 3-127 141-243 (346)
53 cd06542 GH18_EndoS-like Endo-b 86.8 12 0.00027 33.8 11.8 123 3-172 54-178 (255)
54 PRK12313 glycogen branching en 86.0 8.5 0.00018 40.0 11.5 122 2-129 222-361 (633)
55 TIGR02402 trehalose_TreZ malto 86.0 5.3 0.00012 40.8 9.8 109 2-128 162-279 (542)
56 cd06547 GH85_ENGase Endo-beta- 85.6 1.7 3.6E-05 41.7 5.6 94 5-126 51-145 (339)
57 cd06564 GH20_DspB_LnbB-like Gl 85.5 8.4 0.00018 36.5 10.4 111 2-128 84-200 (326)
58 PRK05402 glycogen branching en 85.3 9 0.0002 40.5 11.4 122 2-126 317-455 (726)
59 TIGR01370 cysRS possible cyste 84.7 30 0.00064 32.9 13.5 72 51-127 140-211 (315)
60 COG1649 Uncharacterized protei 84.4 3.2 6.8E-05 40.9 7.0 152 2-172 117-309 (418)
61 TIGR02403 trehalose_treC alpha 83.4 12 0.00027 38.1 11.2 75 51-129 166-244 (543)
62 TIGR02103 pullul_strch alpha-1 82.2 14 0.00031 40.0 11.4 109 2-132 406-527 (898)
63 COG3664 XynB Beta-xylosidase [ 82.1 13 0.00028 36.4 9.9 162 55-256 82-256 (428)
64 TIGR02104 pulA_typeI pullulana 80.4 13 0.00027 38.5 10.1 105 2-126 231-346 (605)
65 cd06565 GH20_GcnA-like Glycosy 80.2 12 0.00026 35.1 9.1 119 2-129 62-186 (301)
66 cd00598 GH18_chitinase-like Th 80.2 21 0.00046 30.8 10.2 122 5-171 54-177 (210)
67 cd02874 GH18_CFLE_spore_hydrol 79.7 15 0.00033 34.3 9.7 96 3-128 48-143 (313)
68 PF14871 GHL6: Hypothetical gl 79.4 4.8 0.0001 33.2 5.4 66 3-70 47-122 (132)
69 TIGR02456 treS_nterm trehalose 78.8 21 0.00046 36.3 11.0 66 51-125 170-236 (539)
70 PRK10933 trehalose-6-phosphate 78.2 26 0.00057 35.8 11.4 21 2-22 83-103 (551)
71 PRK14706 glycogen branching en 78.1 24 0.00051 36.9 11.2 118 2-125 219-354 (639)
72 smart00812 Alpha_L_fucos Alpha 74.5 23 0.00049 34.6 9.4 93 3-123 131-226 (384)
73 KOG4701 Chitinase [Cell wall/m 74.0 92 0.002 30.5 14.3 193 5-254 95-293 (568)
74 PRK14705 glycogen branching en 73.9 26 0.00057 39.3 10.6 123 2-125 817-954 (1224)
75 PLN02447 1,4-alpha-glucan-bran 72.3 38 0.00082 36.1 10.9 124 2-126 302-443 (758)
76 smart00642 Aamy Alpha-amylase 72.1 3.7 8E-05 35.1 3.0 22 2-23 72-93 (166)
77 cd02872 GH18_chitolectin_chito 71.3 35 0.00075 32.5 9.9 71 50-129 90-160 (362)
78 PRK12568 glycogen branching en 70.0 32 0.0007 36.4 9.8 124 2-126 321-459 (730)
79 smart00636 Glyco_18 Glycosyl h 69.2 36 0.00078 31.9 9.4 96 4-129 56-155 (334)
80 cd02871 GH18_chitinase_D-like 68.9 88 0.0019 29.3 11.9 90 4-130 64-156 (312)
81 cd02742 GH20_hexosaminidase Be 65.9 44 0.00095 31.3 9.1 109 2-128 74-191 (303)
82 PF00128 Alpha-amylase: Alpha 65.5 5.6 0.00012 36.1 3.0 55 51-126 141-195 (316)
83 PLN02705 beta-amylase 64.9 15 0.00032 37.8 5.9 81 2-94 307-418 (681)
84 PLN02960 alpha-amylase 64.9 79 0.0017 34.3 11.5 121 2-127 468-609 (897)
85 PLN02801 beta-amylase 63.3 18 0.00039 36.4 6.1 84 2-94 76-187 (517)
86 cd02878 GH18_zymocin_alpha Zym 62.7 1.1E+02 0.0023 29.2 11.3 65 53-128 88-157 (345)
87 PLN02361 alpha-amylase 62.7 23 0.00049 34.8 6.7 22 2-23 78-99 (401)
88 cd06548 GH18_chitinase The GH1 62.1 77 0.0017 29.8 10.1 71 51-129 104-182 (322)
89 PLN00197 beta-amylase; Provisi 61.2 18 0.0004 36.7 5.8 81 2-94 166-276 (573)
90 PLN02877 alpha-amylase/limit d 61.1 1E+02 0.0022 33.9 11.6 117 2-132 468-598 (970)
91 cd02877 GH18_hevamine_XipI_cla 59.7 1.5E+02 0.0032 27.6 11.9 17 4-20 63-79 (280)
92 COG0276 HemH Protoheme ferro-l 59.4 98 0.0021 29.5 10.0 107 2-118 104-218 (320)
93 PF00728 Glyco_hydro_20: Glyco 58.8 19 0.00041 34.0 5.4 111 2-129 75-217 (351)
94 PRK14565 triosephosphate isome 58.4 44 0.00095 30.4 7.3 44 82-129 153-196 (237)
95 KOG0496 Beta-galactosidase [Ca 58.3 29 0.00062 36.0 6.7 82 2-95 90-176 (649)
96 PF04914 DltD_C: DltD C-termin 57.1 70 0.0015 26.3 7.7 50 2-70 38-87 (130)
97 PLN02803 beta-amylase 56.6 25 0.00054 35.7 5.8 83 2-94 146-256 (548)
98 cd06563 GH20_chitobiase-like T 54.1 1.6E+02 0.0034 28.2 10.9 119 2-128 88-225 (357)
99 PRK09441 cytoplasmic alpha-amy 53.5 11 0.00025 37.6 3.0 21 2-22 83-103 (479)
100 TIGR02100 glgX_debranch glycog 53.4 34 0.00073 36.1 6.5 21 2-22 247-267 (688)
101 PRK03705 glycogen debranching 51.9 36 0.00079 35.7 6.4 69 2-70 244-327 (658)
102 PF02156 Glyco_hydro_26: Glyco 51.2 2.2E+02 0.0048 26.9 11.9 61 194-258 142-207 (311)
103 PRK14510 putative bifunctional 51.1 62 0.0013 36.5 8.4 99 2-125 249-371 (1221)
104 TIGR02102 pullulan_Gpos pullul 50.3 1.3E+02 0.0028 33.7 10.5 109 2-132 557-673 (1111)
105 PLN03244 alpha-amylase; Provis 49.8 2.4E+02 0.0052 30.5 11.8 118 2-124 443-581 (872)
106 PF10035 DUF2179: Uncharacteri 49.7 18 0.0004 24.6 2.7 20 109-128 29-48 (55)
107 cd06602 GH31_MGAM_SI_GAA This 49.2 2.4E+02 0.0052 26.8 12.4 114 3-128 69-200 (339)
108 cd02879 GH18_plant_chitinase_c 49.1 1.7E+02 0.0036 27.3 9.9 57 50-119 86-142 (299)
109 cd06568 GH20_SpHex_like A subg 47.7 2.5E+02 0.0055 26.6 11.4 106 2-127 77-194 (329)
110 cd06603 GH31_GANC_GANAB_alpha 47.7 2.5E+02 0.0055 26.6 12.7 85 3-96 67-165 (339)
111 PLN02905 beta-amylase 47.4 70 0.0015 33.2 7.3 90 2-118 325-420 (702)
112 cd06549 GH18_trifunctional GH1 46.8 2.2E+02 0.0048 26.4 10.4 93 49-174 81-173 (298)
113 PRK09505 malS alpha-amylase; R 46.1 18 0.00039 38.0 3.2 22 2-23 294-315 (683)
114 PF02057 Glyco_hydro_59: Glyco 43.3 56 0.0012 34.2 6.0 178 4-256 116-295 (669)
115 cd06562 GH20_HexA_HexB-like Be 42.7 2.9E+02 0.0064 26.3 10.7 119 2-128 72-209 (348)
116 PF00704 Glyco_hydro_18: Glyco 42.6 77 0.0017 29.5 6.6 119 9-170 69-192 (343)
117 PLN02161 beta-amylase 42.3 1.5E+02 0.0033 30.1 8.7 88 2-116 156-253 (531)
118 PRK09997 hydroxypyruvate isome 42.0 1.6E+02 0.0034 26.5 8.4 87 2-124 87-173 (258)
119 COG0366 AmyA Glycosidases [Car 41.6 23 0.00049 35.0 3.0 21 2-22 79-99 (505)
120 cd06546 GH18_CTS3_chitinase GH 40.5 2.9E+02 0.0062 25.2 13.1 122 6-172 65-188 (256)
121 PF14386 DUF4417: Domain of un 40.0 40 0.00087 29.8 4.0 64 4-74 101-169 (200)
122 PRK00042 tpiA triosephosphate 39.7 1.1E+02 0.0024 28.0 6.9 19 3-21 105-127 (250)
123 PLN00196 alpha-amylase; Provis 39.1 26 0.00057 34.7 3.0 20 2-21 94-113 (428)
124 TIGR02455 TreS_stutzeri trehal 38.8 29 0.00063 36.2 3.2 22 2-23 132-153 (688)
125 cd02876 GH18_SI-CLP Stabilin-1 38.5 96 0.0021 29.0 6.6 61 49-120 85-147 (318)
126 PF05089 NAGLU: Alpha-N-acetyl 37.2 92 0.002 29.8 6.1 108 4-128 99-218 (333)
127 PF09875 DUF2102: Uncharacteri 36.7 33 0.0007 27.0 2.5 21 107-127 42-62 (104)
128 PF01261 AP_endonuc_2: Xylose 35.9 1.6E+02 0.0035 24.7 7.2 86 2-123 73-158 (213)
129 KOG2331 Predicted glycosylhydr 35.3 87 0.0019 31.0 5.6 91 7-126 118-208 (526)
130 PF14682 SPOB_ab: Sporulation 35.0 71 0.0015 25.7 4.3 46 79-125 13-62 (115)
131 KOG2806 Chitinase [Carbohydrat 32.6 3.7E+02 0.008 26.6 9.8 61 49-121 140-200 (432)
132 PF13547 GTA_TIM: GTA TIM-barr 32.4 52 0.0011 30.8 3.5 51 204-254 207-290 (299)
133 COG2342 Predicted extracellula 31.9 2.7E+02 0.0059 26.1 8.0 72 49-127 118-190 (300)
134 PF01373 Glyco_hydro_14: Glyco 31.2 24 0.00053 34.5 1.3 80 2-92 55-154 (402)
135 PLN02429 triosephosphate isome 31.1 2E+02 0.0043 27.4 7.3 19 3-21 166-188 (315)
136 TIGR03272 methan_mark_6 putati 30.8 44 0.00096 27.5 2.5 21 107-127 41-61 (132)
137 PRK14567 triosephosphate isome 30.5 1.4E+02 0.0031 27.4 6.1 16 5-20 110-125 (253)
138 cd06591 GH31_xylosidase_XylS X 30.0 2.7E+02 0.0058 26.2 8.1 82 3-97 69-163 (319)
139 TIGR03212 uraD_N-term-dom puta 29.3 2.3E+02 0.0049 26.6 7.4 54 50-119 95-151 (297)
140 PF00121 TIM: Triosephosphate 28.5 57 0.0012 29.7 3.1 18 4-21 108-125 (244)
141 PTZ00333 triosephosphate isome 28.2 2.4E+02 0.0053 25.8 7.2 18 4-21 113-130 (255)
142 cd06601 GH31_lyase_GLase GLase 27.4 2.1E+02 0.0046 27.2 6.9 72 3-98 67-138 (332)
143 KOG2233 Alpha-N-acetylglucosam 27.0 1.8E+02 0.0039 29.5 6.4 67 52-127 214-280 (666)
144 PF13899 Thioredoxin_7: Thiore 26.7 63 0.0014 23.5 2.6 23 2-24 6-28 (82)
145 KOG2566 Beta-glucocerebrosidas 26.4 6.4E+02 0.014 25.0 14.7 172 55-266 226-418 (518)
146 PF03644 Glyco_hydro_85: Glyco 26.3 1.1E+02 0.0024 29.0 4.7 93 5-126 47-140 (311)
147 cd02873 GH18_IDGF The IDGF's ( 26.1 6.3E+02 0.014 24.7 12.1 70 49-128 98-192 (413)
148 cd06570 GH20_chitobiase-like_1 25.8 2.7E+02 0.0058 26.3 7.2 65 2-70 70-145 (311)
149 PF00332 Glyco_hydro_17: Glyco 25.7 53 0.0012 31.0 2.5 33 202-234 226-259 (310)
150 PF02310 B12-binding: B12 bind 25.7 1.1E+02 0.0025 23.6 4.1 39 81-129 50-88 (121)
151 COG1168 MalY Bifunctional PLP- 25.1 99 0.0021 30.1 4.1 64 2-66 180-261 (388)
152 PF02156 Glyco_hydro_26: Glyco 24.6 5.1E+02 0.011 24.5 8.8 79 79-173 146-233 (311)
153 KOG3517 Transcription factor P 24.3 50 0.0011 30.2 1.9 15 79-93 90-105 (334)
154 COG1501 Alpha-glucosidases, fa 24.2 6.4E+02 0.014 27.1 10.4 117 2-133 323-467 (772)
155 cd06595 GH31_xylosidase_XylS-l 23.7 3.3E+02 0.0071 25.2 7.4 84 3-97 77-163 (292)
156 cd06544 GH18_narbonin Narbonin 23.5 5.6E+02 0.012 23.3 15.7 85 59-173 100-186 (253)
157 TIGR02401 trehalose_TreY malto 22.7 75 0.0016 34.2 3.1 23 2-24 67-89 (825)
158 PRK14511 maltooligosyl trehalo 22.7 89 0.0019 33.9 3.7 23 2-24 71-93 (879)
159 cd00019 AP2Ec AP endonuclease 22.2 3.5E+02 0.0076 24.4 7.2 53 53-120 114-166 (279)
160 COG0269 SgbH 3-hexulose-6-phos 21.4 1E+02 0.0022 27.7 3.2 24 2-25 95-118 (217)
161 PLN00061 photosystem II protei 20.6 3.1E+02 0.0068 23.0 5.7 52 55-125 83-134 (150)
162 cd06600 GH31_MGAM-like This fa 20.5 7.1E+02 0.015 23.3 12.0 115 3-129 67-197 (317)
163 PRK14507 putative bifunctional 20.5 1E+02 0.0022 36.1 3.7 25 2-26 809-833 (1693)
No 1
>COG3934 Endo-beta-mannanase [Carbohydrate transport and metabolism]
Probab=99.97 E-value=6.6e-32 Score=256.42 Aligned_cols=230 Identities=23% Similarity=0.379 Sum_probs=181.1
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhcCCCCCCCCCCccCHHHHHHHHHHHHHHHhcccccccccccC
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAGASVNSDDDFYTNAIVKGYYKNHVKKVLTRINTITRIAYKD 81 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~G~~~~~~~~fy~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd 81 (316)
++++++.|..++|||+++|.++|...||+++++.|++. +.+++++-|++++.-+++++..+|+- ||.
T Consensus 69 ~~~fla~a~~l~lkvlitlivg~~hmgg~Nw~Ipwag~-----~~pdn~iyD~k~~~~~kkyvedlVk~--------yk~ 135 (587)
T COG3934 69 AAWFLAPAGYLDLKVLITLIVGLKHMGGTNWRIPWAGE-----QSPDNVIYDPKFRGPGKKYVEDLVKP--------YKL 135 (587)
T ss_pred HHHHhhhcccCcceEEEEEeecccccCcceeEeecCCC-----CCccccccchhhcccHHHHHHHHhhh--------hcc
Confidence 68999999999999999999999999999999999853 56889999999999999999999998 999
Q ss_pred CCcEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCeEEEcccCccCCCCCCcCCCCCCCCcccchhhccCCCC
Q 048104 82 DPTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLLEIGLEGFYGDSIPDKKQFNPGYQVGTDFISNNMIKE 161 (316)
Q Consensus 82 ~PaI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt~G~eG~~~~~~~~~~~~np~~~~g~d~~~~~~~~~ 161 (316)
||||++|.|.|||.|..+.++..+..|..+|.++||++||+|||++|.++++- + .+-| + ..-..
T Consensus 136 ~ptI~gw~l~Ne~lv~~p~s~N~f~~w~~emy~yiK~ldd~hlvsvGD~~sp~---~---~~~p-------y---N~r~~ 199 (587)
T COG3934 136 DPTIAGWALRNEPLVEAPISVNNFWDWSGEMYAYIKWLDDGHLVSVGDPASPW---P---QYAP-------Y---NARFY 199 (587)
T ss_pred ChHHHHHHhcCCccccccCChhHHHHHHHHHHHHhhccCCCCeeecCCcCCcc---c---ccCC-------c---cccee
Confidence 99999999999999987778899999999999999999999999999988631 1 1122 1 12247
Q ss_pred ceEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhhcCC-CcEEEEcccCCcCCCCCCHHHHHHHHHHHHHHHHHHH
Q 048104 162 IDFTTIHAYPDQWLPGKNYYAQMQFVQKWLESHWTDSKTILK-KPLVFSEFGKSCKEAGFSINVRDSFLNTIYMNIYNLA 240 (316)
Q Consensus 162 iD~~t~H~Yp~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~-KPvvi~EfG~~~~~~g~~~~~r~~~~~~v~~~~~~~~ 240 (316)
+||.++|.|| +|..+. ..++...|...|+.++.. .+ +||+++|||.+...+...++.+--|.+.++
T Consensus 200 vDya~~hLY~-hyd~sl----~~r~s~~yg~~~l~i~~~-~g~~pV~leefGfsta~g~e~s~ayfiw~~lal------- 266 (587)
T COG3934 200 VDYAANHLYR-HYDTSL----VSRVSTVYGKPYLDIPTI-MGWQPVNLEEFGFSTAFGQENSPAYFIWIRLAL------- 266 (587)
T ss_pred eccccchhhh-hccCCh----hheeeeeecchhhccchh-cccceeeccccCCcccccccccchhhhhhhhHH-------
Confidence 9999999999 565432 124456677778888876 77 999999999988642222222223322221
Q ss_pred HcCCceeeeeeeccccCCC---------CCCCCCceEEeCCCcc
Q 048104 241 RNGGAIGGGMVWQLMAEGM---------QPYFDGYEIVLSQNPS 275 (316)
Q Consensus 241 ~~~~~~~G~~~W~~~~~g~---------~~~~dg~~i~~~~~~~ 275 (316)
..+ +.|+|+|++.+.+. .+.+++|.|+.+++|.
T Consensus 267 ~~g--gdGaLiwclsdf~~gsdd~ey~w~p~el~fgiIradgpe 308 (587)
T COG3934 267 DTG--GDGALIWCLSDFHLGSDDSEYTWGPMELEFGIIRADGPE 308 (587)
T ss_pred hhc--CCceEEEEecCCccCCCCCCCccccccceeeeecCCCch
Confidence 223 58999999986531 2337899999988774
No 2
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 5 GH5 from CAZY comprises enzymes with several known activities; endoglucanase (3.2.1.4 from EC); beta-mannanase (3.2.1.78 from EC); exo-1,3-glucanase (3.2.1.58 from EC); endo-1,6-glucanase (3.2.1.75 from EC); xylanase (3.2.1.8 from EC); endoglycoceramidase (3.2.1.123 from EC). The microbial degradation of cellulose and xylans requires several types of enzymes. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family A [] or as the glycosyl hydrolases family 5 []. One of the conserved regions in this family contains a conserved glutamic acid residue which is potentially involved [] in the catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3NDY_A 3NDZ_B 1LF1_A 1TVP_B 1TVN_A 3AYR_A 3AYS_A 1QI0_A 1W3K_A 1OCQ_A ....
Probab=99.91 E-value=1e-23 Score=193.61 Aligned_cols=206 Identities=25% Similarity=0.432 Sum_probs=138.8
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhcCCCCCCCCCCccCHHHHHHHHHHHHHHHhcccccccccccC
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAGASVNSDDDFYTNAIVKGYYKNHVKKVLTRINTITRIAYKD 81 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~G~~~~~~~~fy~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd 81 (316)
||.+|++|+++||+|||+||+. ..|. .....+...+..++.++++|+.|++| ||+
T Consensus 64 ld~~v~~a~~~gi~vild~h~~----------~~w~-------~~~~~~~~~~~~~~~~~~~~~~la~~--------y~~ 118 (281)
T PF00150_consen 64 LDRIVDAAQAYGIYVILDLHNA----------PGWA-------NGGDGYGNNDTAQAWFKSFWRALAKR--------YKD 118 (281)
T ss_dssp HHHHHHHHHHTT-EEEEEEEES----------TTCS-------SSTSTTTTHHHHHHHHHHHHHHHHHH--------HTT
T ss_pred HHHHHHHHHhCCCeEEEEeccC----------cccc-------ccccccccchhhHHHHHhhhhhhccc--------cCC
Confidence 8999999999999999999984 1111 01123344556788899999999999 999
Q ss_pred CCcEEEEeecCCCCCCCCC------ChHHHHHHHHHHHHHHHhcCCCCeEEEcccCccCCCCCCcCCCCCCCCcccchhh
Q 048104 82 DPTIMAWELINEPRCQADY------SGKTLNNWVQEMASYVKSIDNKHLLEIGLEGFYGDSIPDKKQFNPGYQVGTDFIS 155 (316)
Q Consensus 82 ~PaI~aWeL~NEP~~~~~~------~~~~~~~w~~e~a~~Iks~Dp~hlVt~G~eG~~~~~~~~~~~~np~~~~g~d~~~ 155 (316)
+|+|++|||+|||.+.... ..+.+.+|++++++.||++||+++|++|..++..... . ....
T Consensus 119 ~~~v~~~el~NEP~~~~~~~~w~~~~~~~~~~~~~~~~~~Ir~~~~~~~i~~~~~~~~~~~~------------~-~~~~ 185 (281)
T PF00150_consen 119 NPPVVGWELWNEPNGGNDDANWNAQNPADWQDWYQRAIDAIRAADPNHLIIVGGGGWGADPD------------G-AAAD 185 (281)
T ss_dssp TTTTEEEESSSSGCSTTSTTTTSHHHTHHHHHHHHHHHHHHHHTTSSSEEEEEEHHHHTBHH------------H-HHHH
T ss_pred CCcEEEEEecCCccccCCccccccccchhhhhHHHHHHHHHHhcCCcceeecCCCccccccc------------h-hhhc
Confidence 9999999999999986432 2367899999999999999999999998754421100 0 0001
Q ss_pred c-cCCCCceEEEeecCCCCCCC--CC--ChHHHHHHHHHHHHHHHHHhhhcCCCcEEEEcccCCcCCCCCCHHHHHHHHH
Q 048104 156 N-NMIKEIDFTTIHAYPDQWLP--GK--NYYAQMQFVQKWLESHWTDSKTILKKPLVFSEFGKSCKEAGFSINVRDSFLN 230 (316)
Q Consensus 156 ~-~~~~~iD~~t~H~Yp~~w~~--~~--~~~~~~~~~~~~i~~~~~~a~~~~~KPvvi~EfG~~~~~~g~~~~~r~~~~~ 230 (316)
. ......+++++|.|+. +.. .. ...........++..+...+.+ .++||+|+|||....... ...++..
T Consensus 186 ~P~~~~~~~~~~~H~Y~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~pv~~gE~G~~~~~~~----~~~~~~~ 259 (281)
T PF00150_consen 186 NPNDADNNDVYSFHFYDP-YDFSDQWNPGNWGDASALESSFRAALNWAKK-NGKPVVVGEFGWSNNDGN----GSTDYAD 259 (281)
T ss_dssp STTTTTTSEEEEEEEETT-TCHHTTTSTCSHHHHHHHHHHHHHHHHHHHH-TTSEEEEEEEESSTTTSC----HHHHHHH
T ss_pred CcccccCceeEEeeEeCC-CCcCCccccccchhhhHHHHHHHHHHHHHHH-cCCeEEEeCcCCcCCCCC----cCHHHHH
Confidence 1 1135677899999995 321 00 0112223445566666666666 899999999999854311 2223333
Q ss_pred HHHHHHHHHHHcCCceeeeeeeccccC
Q 048104 231 TIYMNIYNLARNGGAIGGGMVWQLMAE 257 (316)
Q Consensus 231 ~v~~~~~~~~~~~~~~~G~~~W~~~~~ 257 (316)
.+++.+ ++. .+|+++|+|.++
T Consensus 260 ~~~~~~----~~~--~~g~~~W~~~~~ 280 (281)
T PF00150_consen 260 AWLDYL----EQN--GIGWIYWSWKPN 280 (281)
T ss_dssp HHHHHH----HHT--TCEEEECEESSS
T ss_pred HHHHHH----HHC--CCeEEEEecCCC
Confidence 333322 222 589999999875
No 3
>PRK10150 beta-D-glucuronidase; Provisional
Probab=99.75 E-value=2.2e-16 Score=161.24 Aligned_cols=224 Identities=17% Similarity=0.248 Sum_probs=140.9
Q ss_pred HHHHHHHHHCCCeEEEeCCC--CCCCCCCchhhhHHHHhcCCCC-CCCCCCccCHHHHHHHHHHHHHHHhcccccccccc
Q 048104 3 DFVTSEARKYGIRLILSLSN--NYHDFGGRPQYVNWARAAGASV-NSDDDFYTNAIVKGYYKNHVKKVLTRINTITRIAY 79 (316)
Q Consensus 3 D~~l~~A~k~gi~vil~L~n--~w~~~Gg~~~y~~w~~~~G~~~-~~~~~fy~d~~~~~~~~~~v~~vv~R~N~~tg~~y 79 (316)
..++++|.++||.|+-.+-. .+.+.+.. +. + +... ..-.....+|+.++.+++.++.+|.| +
T Consensus 339 ~~~~~~cD~~GllV~~E~p~~~~~~~~~~~--~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~mv~r--------~ 403 (604)
T PRK10150 339 EEMLDLADRHGIVVIDETPAVGLNLSFGAG--LE-A----GNKPKETYSEEAVNGETQQAHLQAIRELIAR--------D 403 (604)
T ss_pred HHHHHHHHhcCcEEEEeccccccccccccc--cc-c----cccccccccccccchhHHHHHHHHHHHHHHh--------c
Confidence 46789999999999866521 11111100 00 0 0000 00011124578899999999999999 9
Q ss_pred cCCCcEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCeEEEcccCccCCCCCCcCCCCCCCCcccchhhccCC
Q 048104 80 KDDPTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLLEIGLEGFYGDSIPDKKQFNPGYQVGTDFISNNMI 159 (316)
Q Consensus 80 kd~PaI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt~G~eG~~~~~~~~~~~~np~~~~g~d~~~~~~~ 159 (316)
++||+|++|.|+||+.... +....|+++|.+.+|++||.||||.+...+. ++. .....
T Consensus 404 ~NHPSIi~Ws~gNE~~~~~----~~~~~~~~~l~~~~k~~DptR~vt~~~~~~~----------~~~--------~~~~~ 461 (604)
T PRK10150 404 KNHPSVVMWSIANEPASRE----QGAREYFAPLAELTRKLDPTRPVTCVNVMFA----------TPD--------TDTVS 461 (604)
T ss_pred cCCceEEEEeeccCCCccc----hhHHHHHHHHHHHHHhhCCCCceEEEecccC----------Ccc--------ccccc
Confidence 9999999999999987532 3566899999999999999999999863221 110 01124
Q ss_pred CCceEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHH-HhhhcCCCcEEEEcccCCcC-------CCCCCHHHHHHHHHH
Q 048104 160 KEIDFTTIHAYPDQWLPGKNYYAQMQFVQKWLESHWT-DSKTILKKPLVFSEFGKSCK-------EAGFSINVRDSFLNT 231 (316)
Q Consensus 160 ~~iD~~t~H~Yp~~w~~~~~~~~~~~~~~~~i~~~~~-~a~~~~~KPvvi~EfG~~~~-------~~g~~~~~r~~~~~~ 231 (316)
+.+|++++|.|+.......+.... ..++...+. ..+. .+||++++|||.... ...++++.+..+++.
T Consensus 462 ~~~Dv~~~N~Y~~wy~~~~~~~~~----~~~~~~~~~~~~~~-~~kP~~isEyg~~~~~~~h~~~~~~~~ee~q~~~~~~ 536 (604)
T PRK10150 462 DLVDVLCLNRYYGWYVDSGDLETA----EKVLEKELLAWQEK-LHKPIIITEYGADTLAGLHSMYDDMWSEEYQCAFLDM 536 (604)
T ss_pred CcccEEEEcccceecCCCCCHHHH----HHHHHHHHHHHHHh-cCCCEEEEccCCccccccccCCCCCCCHHHHHHHHHH
Confidence 579999999998733222222221 222222222 1222 489999999996442 123467888888776
Q ss_pred HHHHHHHHHHcCCceeeeeeeccccCCC----CCC-CCCceEEeCC
Q 048104 232 IYMNIYNLARNGGAIGGGMVWQLMAEGM----QPY-FDGYEIVLSQ 272 (316)
Q Consensus 232 v~~~~~~~~~~~~~~~G~~~W~~~~~g~----~~~-~dg~~i~~~~ 272 (316)
.... +++.+.++|.++|++.+... ..+ ++..+++..+
T Consensus 537 ~~~~----~~~~p~~~G~~iW~~~D~~~~~g~~~~~g~~~Gl~~~d 578 (604)
T PRK10150 537 YHRV----FDRVPAVVGEQVWNFADFATSQGILRVGGNKKGIFTRD 578 (604)
T ss_pred HHHH----HhcCCceEEEEEEeeeccCCCCCCcccCCCcceeEcCC
Confidence 5543 33345699999999998422 111 3556777554
No 4
>PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This group of beta-galactosidase enzymes (3.2.1.23 from EC) belong to the glycosyl hydrolase 42 family GH42 from CAZY. The enzyme catalyses the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.; GO: 0004565 beta-galactosidase activity, 0005975 carbohydrate metabolic process, 0009341 beta-galactosidase complex; PDB: 1KWK_A 1KWG_A 3U7V_A.
Probab=99.61 E-value=2e-14 Score=138.78 Aligned_cols=243 Identities=20% Similarity=0.309 Sum_probs=128.6
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHh----------cCCCC---CCCCCCccCHHHHHHHHHHHHHHH
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARA----------AGASV---NSDDDFYTNAIVKGYYKNHVKKVL 68 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~----------~G~~~---~~~~~fy~d~~~~~~~~~~v~~vv 68 (316)
||++|+.|+++||+|||.+.. ... +.|... .|... ......+++|.+++.+++++++++
T Consensus 49 lD~~l~~a~~~Gi~viL~~~~-----~~~---P~Wl~~~~Pe~~~~~~~g~~~~~g~~~~~~~~~p~yr~~~~~~~~~l~ 120 (374)
T PF02449_consen 49 LDRVLDLAAKHGIKVILGTPT-----AAP---PAWLYDKYPEILPVDADGRRRGFGSRQHYCPNSPAYREYARRFIRALA 120 (374)
T ss_dssp HHHHHHHHHCTT-EEEEEECT-----TTS----HHHHCCSGCCC-B-TTTSBEECCCSTT-HCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCeEEEEecc-----ccc---ccchhhhcccccccCCCCCcCccCCccccchhHHHHHHHHHHHHHHHH
Confidence 899999999999999998753 112 334321 11110 112334789999999999999999
Q ss_pred hcccccccccccCCCcEEEEeecCCCCCCCCCC-----------------------------------------------
Q 048104 69 TRINTITRIAYKDDPTIMAWELINEPRCQADYS----------------------------------------------- 101 (316)
Q Consensus 69 ~R~N~~tg~~ykd~PaI~aWeL~NEP~~~~~~~----------------------------------------------- 101 (316)
+| |+++|+|++|+|.|||.+..+.+
T Consensus 121 ~~--------y~~~p~vi~~~i~NE~~~~~~~~~~~~~~f~~wLk~kY~ti~~LN~aWgt~~ws~~~~~f~~v~~P~~~~ 192 (374)
T PF02449_consen 121 ER--------YGDHPAVIGWQIDNEPGYHRCYSPACQAAFRQWLKEKYGTIEALNRAWGTAFWSQRYSSFDEVPPPRPTS 192 (374)
T ss_dssp HH--------HTTTTTEEEEEECCSTTCTS--SHHHHHHHHHHHHHHHSSHHHHHHHHTTTGGG---SSGGG---S-S-S
T ss_pred hh--------ccccceEEEEEeccccCcCcCCChHHHHHHHHHHHHHhCCHHHHHHHHcCCcccCccCcHHhcCCCCCCC
Confidence 99 99999999999999997631100
Q ss_pred ----h-----------HHHHHHHHHHHHHHHhcCCCCeEEEcccCccCCCCCCcCCCCCCCCcccchhhccCCCCceEEE
Q 048104 102 ----G-----------KTLNNWVQEMASYVKSIDNKHLLEIGLEGFYGDSIPDKKQFNPGYQVGTDFISNNMIKEIDFTT 166 (316)
Q Consensus 102 ----~-----------~~~~~w~~e~a~~Iks~Dp~hlVt~G~eG~~~~~~~~~~~~np~~~~g~d~~~~~~~~~iD~~t 166 (316)
+ +.+..|+..+++.||++||+++|++...|... .+.|+... .+.+|+++
T Consensus 193 ~~~~~~~~~D~~rF~~~~~~~~~~~~~~~ir~~~p~~~vt~n~~~~~~--------------~~~d~~~~--a~~~D~~~ 256 (374)
T PF02449_consen 193 SPENPAQWLDWYRFQSDRVAEFFRWQADIIREYDPDHPVTTNFMGSWF--------------NGIDYFKW--AKYLDVVS 256 (374)
T ss_dssp S---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTT-EEE-EE-TT-----------------SS-HHHH--GGGSSSEE
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeCcccccc--------------CcCCHHHH--HhhCCcce
Confidence 0 23455678889999999999999986654200 11244332 46799999
Q ss_pred eecCCCC-CCCCCChHHHHHHHHHHHHHHHHHhhhcCCCcEEEEcccCCcCCCC-CCHHHHHHHHHHHHHHHHHHHHcCC
Q 048104 167 IHAYPDQ-WLPGKNYYAQMQFVQKWLESHWTDSKTILKKPLVFSEFGKSCKEAG-FSINVRDSFLNTIYMNIYNLARNGG 244 (316)
Q Consensus 167 ~H~Yp~~-w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~KPvvi~EfG~~~~~~g-~~~~~r~~~~~~v~~~~~~~~~~~~ 244 (316)
++.||.. +...........+..+.++. . + .+||+++.|.-....+.+ .....+...++. ..+.++..|
T Consensus 257 ~d~Y~~~~~~~~~~~~~~~a~~~dl~R~----~-~-~~kpf~v~E~~~g~~~~~~~~~~~~pg~~~~---~~~~~~A~G- 326 (374)
T PF02449_consen 257 WDSYPDGSFDFYDDDPYSLAFNHDLMRS----L-A-KGKPFWVMEQQPGPVNWRPYNRPPRPGELRL---WSWQAIAHG- 326 (374)
T ss_dssp EEE-HHHHHTTTT--TTHHHHHHHHHHH----H-T-TT--EEEEEE--S--SSSSS-----TTHHHH---HHHHHHHTT-
T ss_pred eccccCcccCCCCCCHHHHHHHHHHHHh----h-c-CCCceEeecCCCCCCCCccCCCCCCCCHHHH---HHHHHHHHh-
Confidence 9999981 00001111122333333322 2 2 689999999955422110 111111122221 222333344
Q ss_pred ceeeeeeeccccC--CCCCCCCCceEEeCCC-ccH--HHHHHHHHHHHHh
Q 048104 245 AIGGGMVWQLMAE--GMQPYFDGYEIVLSQN-PST--RSVIAQQSNKMTA 289 (316)
Q Consensus 245 ~~~G~~~W~~~~~--g~~~~~dg~~i~~~~~-~~~--~~~i~~~~~~~~~ 289 (316)
+.|.+||+|... |.+.. .++|+-.++ +.+ ..=+++..++|++
T Consensus 327 -a~~i~~~~wr~~~~g~E~~--~~g~~~~dg~~~~~~~~e~~~~~~~l~~ 373 (374)
T PF02449_consen 327 -ADGILFWQWRQSRFGAEQF--HGGLVDHDGREPTRRYREVAQLGRELKK 373 (374)
T ss_dssp --S-EEEC-SB--SSSTTTT--S--SB-TTS--B-HHHHHHHHHHHHHHT
T ss_pred -CCeeEeeeccCCCCCchhh--hcccCCccCCCCCcHHHHHHHHHHHHhc
Confidence 789999999763 43331 356665555 322 2334444444444
No 5
>PF12876 Cellulase-like: Sugar-binding cellulase-like; InterPro: IPR024778 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This entry represents a family of putative cellulase enzymes.; PDB: 3GYC_B.
Probab=99.60 E-value=1.1e-15 Score=117.68 Aligned_cols=79 Identities=28% Similarity=0.587 Sum_probs=50.4
Q ss_pred HHhcccccccccccCCCcEEEEeecCC-CCCCC--------CCChHHHHHHHHHHHHHHHhcCCCCeEEEcccCccCCCC
Q 048104 67 VLTRINTITRIAYKDDPTIMAWELINE-PRCQA--------DYSGKTLNNWVQEMASYVKSIDNKHLLEIGLEGFYGDSI 137 (316)
Q Consensus 67 vv~R~N~~tg~~ykd~PaI~aWeL~NE-P~~~~--------~~~~~~~~~w~~e~a~~Iks~Dp~hlVt~G~eG~~~~~~ 137 (316)
||+| |++||+|++|||+|| |.... ....+.+..|+++++++||++||+|+||+|..+. ..
T Consensus 1 iv~~--------~~~~~~Il~Wdl~NE~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~iR~~dP~~pvt~g~~~~---~~ 69 (88)
T PF12876_consen 1 IVTR--------FGYDPRILAWDLWNEPPNNWADGYPAEWGDPKAEAYAEWLKEAFRWIRAVDPSQPVTSGFWGG---DW 69 (88)
T ss_dssp -HHH--------TT-GGGEEEEESSTTTT-TT-TT-TT-TT-TTSHHHHHHHHHHHHHHHTT-TTS-EE--B--S----T
T ss_pred Cchh--------hcCCCCEEEEEeecCCCCcccccccccccchhHHHHHHHHHHHHHHHHHhCCCCcEEeecccC---CH
Confidence 5777 999999999999999 76221 1124678999999999999999999999987432 10
Q ss_pred CCcCCCCCCCCcccchhhccCCCCceEEEeecC
Q 048104 138 PDKKQFNPGYQVGTDFISNNMIKEIDFTTIHAY 170 (316)
Q Consensus 138 ~~~~~~np~~~~g~d~~~~~~~~~iD~~t~H~Y 170 (316)
..+ ....++.+||+|||.|
T Consensus 70 -------------~~~-~~~~~~~~DvisfH~Y 88 (88)
T PF12876_consen 70 -------------EDL-EQLQAENLDVISFHPY 88 (88)
T ss_dssp -------------THH-HHS--TT-SSEEB-EE
T ss_pred -------------HHH-HHhchhcCCEEeeecC
Confidence 012 2334689999999998
No 6
>PF02836 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM barrel domain; InterPro: IPR006103 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 2 GH2 from CAZY comprises enzymes with several known activities; beta-galactosidase (3.2.1.23 from EC); beta-mannosidase (3.2.1.25 from EC); beta-glucuronidase (3.2.1.31 from EC). These enzymes contain a conserved glutamic acid residue which has been shown [], in Escherichia coli lacZ (P00722 from SWISSPROT), to be the general acid/base catalyst in the active site of the enzyme. Beta-galactosidase from E. coli has a TIM-barrel-like core surrounded by four other largely beta domains [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3CMG_A 3FN9_C 1YQ2_A 3K4D_B 3LPG_B 3LPF_A 3K4A_B 3K46_B 3GM8_A 3DEC_A ....
Probab=99.41 E-value=9.5e-12 Score=116.45 Aligned_cols=98 Identities=15% Similarity=0.275 Sum_probs=71.4
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhcCCCCCCCCCCccCHHHHHHHHHHHHHHHhcccccccccccCC
Q 048104 3 DFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAGASVNSDDDFYTNAIVKGYYKNHVKKVLTRINTITRIAYKDD 82 (316)
Q Consensus 3 D~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~G~~~~~~~~fy~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd~ 82 (316)
..+++.|.++||.|+..+... .+|.... .| .......++..++.+++.++.+|.| +++|
T Consensus 62 ~~~~~~cD~~GilV~~e~~~~--~~~~~~~-------~~----~~~~~~~~~~~~~~~~~~~~~~v~~--------~~NH 120 (298)
T PF02836_consen 62 PRFYDLCDELGILVWQEIPLE--GHGSWQD-------FG----NCNYDADDPEFRENAEQELREMVRR--------DRNH 120 (298)
T ss_dssp HHHHHHHHHHT-EEEEE-S-B--SCTSSSS-------TS----CTSCTTTSGGHHHHHHHHHHHHHHH--------HTT-
T ss_pred HHHHHHHhhcCCEEEEecccc--ccCcccc-------CC----ccccCCCCHHHHHHHHHHHHHHHHc--------CcCc
Confidence 467889999999998776330 0111000 01 0123456889999999999999999 9999
Q ss_pred CcEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCeEEEccc
Q 048104 83 PTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLLEIGLE 130 (316)
Q Consensus 83 PaI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt~G~e 130 (316)
|+|++|.++||+ ....++++|...+|++||.+||+.++.
T Consensus 121 PSIi~W~~gNE~---------~~~~~~~~l~~~~k~~DptRpv~~~~~ 159 (298)
T PF02836_consen 121 PSIIMWSLGNES---------DYREFLKELYDLVKKLDPTRPVTYASN 159 (298)
T ss_dssp TTEEEEEEEESS---------HHHHHHHHHHHHHHHH-TTSEEEEETG
T ss_pred CchheeecCccC---------ccccchhHHHHHHHhcCCCCceeeccc
Confidence 999999999998 355788999999999999999998763
No 7
>smart00633 Glyco_10 Glycosyl hydrolase family 10.
Probab=99.35 E-value=2.7e-11 Score=111.03 Aligned_cols=205 Identities=18% Similarity=0.268 Sum_probs=129.7
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhcCCCCCCCCCCccCHHHHHHHHHHHHHHHhcccccccccccC
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAGASVNSDDDFYTNAIVKGYYKNHVKKVLTRINTITRIAYKD 81 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~G~~~~~~~~fy~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd 81 (316)
+|.+++.|+++||++.--.. -|+. +.+.|.... +.++.++.+.+|++.+++| |++
T Consensus 18 ~D~~~~~a~~~gi~v~gH~l-~W~~-----~~P~W~~~~-----------~~~~~~~~~~~~i~~v~~r--------y~g 72 (254)
T smart00633 18 ADAIVNFAKENGIKVRGHTL-VWHS-----QTPDWVFNL-----------SKETLLARLENHIKTVVGR--------YKG 72 (254)
T ss_pred HHHHHHHHHHCCCEEEEEEE-eecc-----cCCHhhhcC-----------CHHHHHHHHHHHHHHHHHH--------hCC
Confidence 69999999999999843211 2432 235676321 1457889999999999999 987
Q ss_pred CCcEEEEeecCCCCCCCCC--ChHHH-----HHHHHHHHHHHHhcCCCCeEEEcccCccCCCCCCcCCCCCCCCcccchh
Q 048104 82 DPTIMAWELINEPRCQADY--SGKTL-----NNWVQEMASYVKSIDNKHLLEIGLEGFYGDSIPDKKQFNPGYQVGTDFI 154 (316)
Q Consensus 82 ~PaI~aWeL~NEP~~~~~~--~~~~~-----~~w~~e~a~~Iks~Dp~hlVt~G~eG~~~~~~~~~~~~np~~~~g~d~~ 154 (316)
. |..||+.|||...... ....+ ..|+.+..+.+|+.||+..+.+.. |+...+.. . ...-..++
T Consensus 73 ~--i~~wdV~NE~~~~~~~~~~~~~w~~~~G~~~i~~af~~ar~~~P~a~l~~Nd---y~~~~~~~---k--~~~~~~~v 142 (254)
T smart00633 73 K--IYAWDVVNEALHDNGSGLRRSVWYQILGEDYIEKAFRYAREADPDAKLFYND---YNTEEPNA---K--RQAIYELV 142 (254)
T ss_pred c--ceEEEEeeecccCCCcccccchHHHhcChHHHHHHHHHHHHhCCCCEEEEec---cCCcCccH---H--HHHHHHHH
Confidence 6 8889999999875311 00011 268899999999999998888764 33221100 0 00001122
Q ss_pred hccCC--CCceEEEe--ecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhhcCCCcEEEEcccCCcCCCCCCHHHHHHHHH
Q 048104 155 SNNMI--KEIDFTTI--HAYPDQWLPGKNYYAQMQFVQKWLESHWTDSKTILKKPLVFSEFGKSCKEAGFSINVRDSFLN 230 (316)
Q Consensus 155 ~~~~~--~~iD~~t~--H~Yp~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~KPvvi~EfG~~~~~~g~~~~~r~~~~~ 230 (316)
..+.. -.||-+.+ |++... .+.+ .+.+.++...+ +++||.|+|+++.... +++.|+++++
T Consensus 143 ~~l~~~g~~iDgiGlQ~H~~~~~----~~~~--------~~~~~l~~~~~-~g~pi~iTE~dv~~~~---~~~~qA~~~~ 206 (254)
T smart00633 143 KKLKAKGVPIDGIGLQSHLSLGS----PNIA--------EIRAALDRFAS-LGLEIQITELDISGYP---NPQAQAADYE 206 (254)
T ss_pred HHHHHCCCccceeeeeeeecCCC----CCHH--------HHHHHHHHHHH-cCCceEEEEeecCCCC---cHHHHHHHHH
Confidence 22111 12665554 554321 1111 13344444454 7999999999998753 3477889988
Q ss_pred HHHHHHHHHHHcCCceeeeeeeccccCCCCCCC
Q 048104 231 TIYMNIYNLARNGGAIGGGMVWQLMAEGMQPYF 263 (316)
Q Consensus 231 ~v~~~~~~~~~~~~~~~G~~~W~~~~~g~~~~~ 263 (316)
.++..+++. +.+.|.++|.+.+. .+|.
T Consensus 207 ~~l~~~~~~----p~v~gi~~Wg~~d~--~~W~ 233 (254)
T smart00633 207 EVFKACLAH----PAVTGVTVWGVTDK--YSWL 233 (254)
T ss_pred HHHHHHHcC----CCeeEEEEeCCccC--Cccc
Confidence 888876553 35899999998876 3553
No 8
>PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This domain is found in family 53 of the glycosyl hydrolase classification []. These enzymes are endo-1,4- beta-galactanases (3.2.1.89 from EC). The structure of this domain is known [] and has a TIM barrel fold.; GO: 0015926 glucosidase activity; PDB: 1HJQ_A 1HJS_A 1HJU_B 1FHL_A 1FOB_A 2GFT_A 1UR4_B 1UR0_A 1R8L_B 2CCR_A ....
Probab=99.28 E-value=7.3e-11 Score=111.57 Aligned_cols=207 Identities=19% Similarity=0.224 Sum_probs=121.5
Q ss_pred HHHHH---HHHHHCCCeEEEeCC--CCCCCCCCchhhhHHHHhcCCCCCCCCCCccCHHHHHHHHHHHHHHHhccccccc
Q 048104 2 LDFVT---SEARKYGIRLILSLS--NNYHDFGGRPQYVNWARAAGASVNSDDDFYTNAIVKGYYKNHVKKVLTRINTITR 76 (316)
Q Consensus 2 LD~~l---~~A~k~gi~vil~L~--n~w~~~Gg~~~y~~w~~~~G~~~~~~~~fy~d~~~~~~~~~~v~~vv~R~N~~tg 76 (316)
|++++ ..|++.||+|+|+|| +.|.+.|.+..=..|.+ .+-.++.+...+|.+.+++.
T Consensus 57 ~~~~~~~akrak~~Gm~vlldfHYSD~WaDPg~Q~~P~aW~~------------~~~~~l~~~v~~yT~~vl~~------ 118 (332)
T PF07745_consen 57 LEDVIALAKRAKAAGMKVLLDFHYSDFWADPGKQNKPAAWAN------------LSFDQLAKAVYDYTKDVLQA------ 118 (332)
T ss_dssp HHHHHHHHHHHHHTT-EEEEEE-SSSS--BTTB-B--TTCTS------------SSHHHHHHHHHHHHHHHHHH------
T ss_pred HHHHHHHHHHHHHCCCeEEEeecccCCCCCCCCCCCCccCCC------------CCHHHHHHHHHHHHHHHHHH------
Confidence 44444 456789999999998 67777664321112220 24467888888999999998
Q ss_pred ccccCCC-cEEEEeecCCCCCCCCC------ChHHHHHHHHHHHHHHHhcCCCCeEEEcccCccCCCCCCcCCCCCCCCc
Q 048104 77 IAYKDDP-TIMAWELINEPRCQADY------SGKTLNNWVQEMASYVKSIDNKHLLEIGLEGFYGDSIPDKKQFNPGYQV 149 (316)
Q Consensus 77 ~~ykd~P-aI~aWeL~NEP~~~~~~------~~~~~~~w~~e~a~~Iks~Dp~hlVt~G~eG~~~~~~~~~~~~np~~~~ 149 (316)
+++.- .+-.++++||.+..... .-+.+.+.++..+++||+++|+..|.+-.+.-. . +..+
T Consensus 119 --l~~~G~~pd~VQVGNEin~Gmlwp~g~~~~~~~~a~ll~ag~~AVr~~~p~~kV~lH~~~~~---~------~~~~-- 185 (332)
T PF07745_consen 119 --LKAAGVTPDMVQVGNEINNGMLWPDGKPSNWDNLAKLLNAGIKAVREVDPNIKVMLHLANGG---D------NDLY-- 185 (332)
T ss_dssp --HHHTT--ESEEEESSSGGGESTBTTTCTT-HHHHHHHHHHHHHHHHTHSSTSEEEEEES-TT---S------HHHH--
T ss_pred --HHHCCCCccEEEeCccccccccCcCCCccCHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCC---c------hHHH--
Confidence 76643 34468999998754321 235688889999999999999999988654210 0 0000
Q ss_pred ccchhhcc--CCCCceEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhhcCCCcEEEEcccCCcCC----------
Q 048104 150 GTDFISNN--MIKEIDFTTIHAYPDQWLPGKNYYAQMQFVQKWLESHWTDSKTILKKPLVFSEFGKSCKE---------- 217 (316)
Q Consensus 150 g~d~~~~~--~~~~iD~~t~H~Yp~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~KPvvi~EfG~~~~~---------- 217 (316)
.-|...+ .--..|++.+++||. |.. .. +.+..-+. ..+.+ ++|||+|.|.|.....
T Consensus 186 -~~~f~~l~~~g~d~DviGlSyYP~-w~~--~l----~~l~~~l~---~l~~r-y~K~V~V~Et~yp~t~~d~D~~~n~~ 253 (332)
T PF07745_consen 186 -RWFFDNLKAAGVDFDVIGLSYYPF-WHG--TL----EDLKNNLN---DLASR-YGKPVMVVETGYPWTLDDGDGTGNII 253 (332)
T ss_dssp -HHHHHHHHHTTGG-SEEEEEE-ST-TST---H----HHHHHHHH---HHHHH-HT-EEEEEEE---SBS--SSSS--SS
T ss_pred -HHHHHHHHhcCCCcceEEEecCCC-Ccc--hH----HHHHHHHH---HHHHH-hCCeeEEEeccccccccccccccccC
Confidence 0111111 235678999999996 432 22 22222222 23344 8999999999976550
Q ss_pred ------CC--CCHHHHHHHHHHHHHHHHHHHHcCCceeeeeeec
Q 048104 218 ------AG--FSINVRDSFLNTIYMNIYNLARNGGAIGGGMVWQ 253 (316)
Q Consensus 218 ------~g--~~~~~r~~~~~~v~~~~~~~~~~~~~~~G~~~W~ 253 (316)
.+ .+.+.|..|++.+++.+.+. . ++.+.|.++|.
T Consensus 254 ~~~~~~~~yp~t~~GQ~~~l~~l~~~v~~~-p-~~~g~GvfYWe 295 (332)
T PF07745_consen 254 GATSLISGYPATPQGQADFLRDLINAVKNV-P-NGGGLGVFYWE 295 (332)
T ss_dssp SSSTGGTTS-SSHHHHHHHHHHHHHHHHTS----TTEEEEEEE-
T ss_pred ccccccCCCCCCHHHHHHHHHHHHHHHHHh-c-cCCeEEEEeec
Confidence 11 25788999999888765331 1 24589999995
No 9
>PRK10340 ebgA cryptic beta-D-galactosidase subunit alpha; Reviewed
Probab=99.26 E-value=1.7e-10 Score=123.91 Aligned_cols=137 Identities=17% Similarity=0.309 Sum_probs=94.6
Q ss_pred CccCHHHHHHHHHHHHHHHhcccccccccccCCCcEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCeEEEcc
Q 048104 50 FYTNAIVKGYYKNHVKKVLTRINTITRIAYKDDPTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLLEIGL 129 (316)
Q Consensus 50 fy~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd~PaI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt~G~ 129 (316)
++.+|..++.+.+.++.+|.| +++||+|+.|.|+||.... .. +.+|++.+|++||.+||+...
T Consensus 414 ~~~~p~~~~~~~~~~~~mV~R--------drNHPSIi~WslGNE~~~g-----~~----~~~~~~~~k~~DptR~v~~~~ 476 (1021)
T PRK10340 414 ITDDPQWEKVYVDRIVRHIHA--------QKNHPSIIIWSLGNESGYG-----CN----IRAMYHAAKALDDTRLVHYEE 476 (1021)
T ss_pred ccCCHHHHHHHHHHHHHHHHh--------CCCCCEEEEEECccCcccc-----HH----HHHHHHHHHHhCCCceEEeCC
Confidence 356788889999999999999 9999999999999998542 22 478999999999999998642
Q ss_pred cCccCCCCCCcCCCCCCCCcccchhhccCCCCceEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhhcCCCcEEEE
Q 048104 130 EGFYGDSIPDKKQFNPGYQVGTDFISNNMIKEIDFTTIHAYPDQWLPGKNYYAQMQFVQKWLESHWTDSKTILKKPLVFS 209 (316)
Q Consensus 130 eG~~~~~~~~~~~~np~~~~g~d~~~~~~~~~iD~~t~H~Yp~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~KPvvi~ 209 (316)
.. ....+|+++. +|+.. + .+..+. +...+||++++
T Consensus 477 ~~--------------------------~~~~~Dv~~~-~Y~~~-----------~----~~~~~~---~~~~~kP~i~~ 511 (1021)
T PRK10340 477 DR--------------------------DAEVVDVIST-MYTRV-----------E----LMNEFG---EYPHPKPRILC 511 (1021)
T ss_pred Cc--------------------------Cccccceecc-ccCCH-----------H----HHHHHH---hCCCCCcEEEE
Confidence 10 1235788885 46532 1 122221 11147999999
Q ss_pred cccCCcCCCCCCHHHHHHHHHHHHHHHHHHHHcCCceeeeeeeccccCCC
Q 048104 210 EFGKSCKEAGFSINVRDSFLNTIYMNIYNLARNGGAIGGGMVWQLMAEGM 259 (316)
Q Consensus 210 EfG~~~~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~G~~~W~~~~~g~ 259 (316)
||+-...+ +.....+|... ..+...+.|.++|.|.++|.
T Consensus 512 Ey~hamgn---~~g~~~~yw~~--------~~~~p~l~GgfiW~~~D~~~ 550 (1021)
T PRK10340 512 EYAHAMGN---GPGGLTEYQNV--------FYKHDCIQGHYVWEWCDHGI 550 (1021)
T ss_pred chHhccCC---CCCCHHHHHHH--------HHhCCceeEEeeeecCcccc
Confidence 99975432 11122344332 22235699999999998754
No 10
>PRK09525 lacZ beta-D-galactosidase; Reviewed
Probab=99.21 E-value=4.4e-10 Score=120.75 Aligned_cols=149 Identities=17% Similarity=0.305 Sum_probs=94.4
Q ss_pred CccCHHHHHHHHHHHHHHHhcccccccccccCCCcEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCeEEEcc
Q 048104 50 FYTNAIVKGYYKNHVKKVLTRINTITRIAYKDDPTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLLEIGL 129 (316)
Q Consensus 50 fy~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd~PaI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt~G~ 129 (316)
...+|...+.+.+.++.+|.| +|+||+|++|.|+||+.... . ..+|...+|++||.+||+..+
T Consensus 427 ~~~dp~~~~~~~~~~~~mV~R--------drNHPSIi~WSlgNE~~~g~-----~----~~~l~~~~k~~DptRpV~y~~ 489 (1027)
T PRK09525 427 LSDDPRWLPAMSERVTRMVQR--------DRNHPSIIIWSLGNESGHGA-----N----HDALYRWIKSNDPSRPVQYEG 489 (1027)
T ss_pred CCCCHHHHHHHHHHHHHHHHh--------CCCCCEEEEEeCccCCCcCh-----h----HHHHHHHHHhhCCCCcEEECC
Confidence 356788999999999999999 99999999999999986421 2 468899999999999998743
Q ss_pred cCccCCCCCCcCCCCCCCCcccchhhccCCCCceEEEeecCCCC-CCCCCChHHHHHHHHHHHHHHHHHhhhcCCCcEEE
Q 048104 130 EGFYGDSIPDKKQFNPGYQVGTDFISNNMIKEIDFTTIHAYPDQ-WLPGKNYYAQMQFVQKWLESHWTDSKTILKKPLVF 208 (316)
Q Consensus 130 eG~~~~~~~~~~~~np~~~~g~d~~~~~~~~~iD~~t~H~Yp~~-w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~KPvvi 208 (316)
.+. . ....|+++. +|+.. +...... .....+..|.. .. . .+||+++
T Consensus 490 ~~~-~------------------------~~~~Dv~~~-my~~~~~~~~~~~-~~~~~~~~~~~----~~-~-~~kP~i~ 536 (1027)
T PRK09525 490 GGA-D------------------------TAATDIICP-MYARVDEDQPFPA-VPKWSIKKWIS----LP-G-ETRPLIL 536 (1027)
T ss_pred CCC-C------------------------CCccccccC-CCCCccccccccc-cchHHHHHHHh----cC-C-CCCCEEE
Confidence 110 0 123555553 45432 1100000 00011233321 11 1 4699999
Q ss_pred EcccCCcCCCCCCHHHHHHHHHHHHHHHHHHHHcCCceeeeeeeccccCCC
Q 048104 209 SEFGKSCKEAGFSINVRDSFLNTIYMNIYNLARNGGAIGGGMVWQLMAEGM 259 (316)
Q Consensus 209 ~EfG~~~~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~G~~~W~~~~~g~ 259 (316)
+|||-...+ +...-.+|... ..+...+.|.++|.|.++|.
T Consensus 537 cEY~Hamgn---~~g~l~~yw~~--------~~~~~~~~GgfIW~w~Dqg~ 576 (1027)
T PRK09525 537 CEYAHAMGN---SLGGFAKYWQA--------FRQYPRLQGGFIWDWVDQGL 576 (1027)
T ss_pred EechhcccC---cCccHHHHHHH--------HhcCCCeeEEeeEeccCcce
Confidence 999966543 22223344332 22345699999999998755
No 11
>TIGR03356 BGL beta-galactosidase.
Probab=99.13 E-value=3.3e-09 Score=104.18 Aligned_cols=240 Identities=19% Similarity=0.269 Sum_probs=144.1
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhcCCCCCCCCCCccCHHHHHHHHHHHHHHHhcccccccccccC
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAGASVNSDDDFYTNAIVKGYYKNHVKKVLTRINTITRIAYKD 81 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~G~~~~~~~~fy~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd 81 (316)
.|.+|+++.++||++|++|+. |+ + +.|....|+ |.+++..+.|.++++.+++| |++
T Consensus 96 y~~~i~~l~~~gi~pivtL~H-fd----~---P~~l~~~gG--------w~~~~~~~~f~~ya~~~~~~--------~~d 151 (427)
T TIGR03356 96 YDRLVDELLEAGIEPFVTLYH-WD----L---PQALEDRGG--------WLNRDTAEWFAEYAAVVAER--------LGD 151 (427)
T ss_pred HHHHHHHHHHcCCeeEEeecc-CC----c---cHHHHhcCC--------CCChHHHHHHHHHHHHHHHH--------hCC
Confidence 588999999999999999985 32 2 334322232 67799999999999999999 999
Q ss_pred CCcEEEEeecCCCCCCCC---------C---ChH-HHH------HHHHHHHHHHHhcCCCCeEEEcccC--ccCCC-CCC
Q 048104 82 DPTIMAWELINEPRCQAD---------Y---SGK-TLN------NWVQEMASYVKSIDNKHLLEIGLEG--FYGDS-IPD 139 (316)
Q Consensus 82 ~PaI~aWeL~NEP~~~~~---------~---~~~-~~~------~w~~e~a~~Iks~Dp~hlVt~G~eG--~~~~~-~~~ 139 (316)
. |--|.+.|||.+... + +.. .++ .=..+....+|++.|+..|.+-... +|..+ .++
T Consensus 152 ~--v~~w~t~NEp~~~~~~~y~~G~~~P~~~~~~~~~~~~hnll~Aha~A~~~~~~~~~~~~IGi~~~~~~~~P~~~~~~ 229 (427)
T TIGR03356 152 R--VKHWITLNEPWCSAFLGYGLGVHAPGLRDLRAALQAAHHLLLAHGLAVQALRANGPGAQVGIVLNLTPVYPASDSPE 229 (427)
T ss_pred c--CCEEEEecCcceecccchhhccCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeeeeCCCCHH
Confidence 4 667999999985321 1 111 111 1134556788888998666553322 12111 000
Q ss_pred -------------cCCCCCCCCcccchh----h-------------ccCCCCceEEEeecCCCCCCCCC-----------
Q 048104 140 -------------KKQFNPGYQVGTDFI----S-------------NNMIKEIDFTTIHAYPDQWLPGK----------- 178 (316)
Q Consensus 140 -------------~~~~np~~~~g~d~~----~-------------~~~~~~iD~~t~H~Yp~~w~~~~----------- 178 (316)
.+-.+|-. .| ++. . ......+||+.+..|........
T Consensus 230 d~~aa~~~~~~~~~~f~d~~~-~G-~yP~~~~~~l~~~p~~~~~d~~~l~~~~DFiGiNyY~~~~v~~~~~~~~~~~~~~ 307 (427)
T TIGR03356 230 DVAAARRADGLLNRWFLDPLL-KG-RYPEDLLEYLGDAPFVQDGDLETIAQPLDFLGINYYTRSVVAADPGTGAGFVEVP 307 (427)
T ss_pred HHHHHHHHHHHHhhhhhHHHh-CC-CCCHHHHHHhccCCCCCHHHHHHhcCCCCEEEEeccccceeccCCCCCCCccccC
Confidence 00001100 00 010 0 00124679999999975532110
Q ss_pred -ChH-HHH--HHHHHHHHHHHHHhhhcCCC-cEEEEcccCCcCC---CC-CCHHHHHHHHHHHHHHHHHHHHcCCceeee
Q 048104 179 -NYY-AQM--QFVQKWLESHWTDSKTILKK-PLVFSEFGKSCKE---AG-FSINVRDSFLNTIYMNIYNLARNGGAIGGG 249 (316)
Q Consensus 179 -~~~-~~~--~~~~~~i~~~~~~a~~~~~K-Pvvi~EfG~~~~~---~g-~~~~~r~~~~~~v~~~~~~~~~~~~~~~G~ 249 (316)
..+ ... +....-++..+....+.+++ |++|+|-|..... .| .....|..|++.-+..+.++.+.|-++.|.
T Consensus 308 ~~~~~~~~gw~i~P~Gl~~~L~~~~~rY~~ppi~ITENG~~~~d~~~~g~~~D~~Ri~yl~~hl~~~~~Ai~dGv~v~GY 387 (427)
T TIGR03356 308 EGVPKTAMGWEVYPEGLYDLLLRLKEDYPGPPIYITENGAAFDDEVTDGEVHDPERIAYLRDHLAALARAIEEGVDVRGY 387 (427)
T ss_pred CCCCcCCCCCeechHHHHHHHHHHHHhcCCCCEEEeCCCCCcCCCCcCCCcCCHHHHHHHHHHHHHHHHHHHCCCCEEEE
Confidence 000 000 00011133333333334787 7999999986422 11 135689999999999998888888889999
Q ss_pred eeeccccCCCCCCCCCc----eEEeC
Q 048104 250 MVWQLMAEGMQPYFDGY----EIVLS 271 (316)
Q Consensus 250 ~~W~~~~~g~~~~~dg~----~i~~~ 271 (316)
+.|++.+. -.|.+|| ++++-
T Consensus 388 ~~Wsl~Dn--~ew~~gy~~rfGl~~V 411 (427)
T TIGR03356 388 FVWSLLDN--FEWAEGYSKRFGLVHV 411 (427)
T ss_pred Eecccccc--cchhcccccccceEEE
Confidence 99999987 4555555 55544
No 12
>COG2730 BglC Endoglucanase [Carbohydrate transport and metabolism]
Probab=99.00 E-value=6.7e-09 Score=101.53 Aligned_cols=106 Identities=25% Similarity=0.277 Sum_probs=71.4
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhcCCCCCCCCCCccC-HHHHHHHHHHHHHHHhccccccccccc
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAGASVNSDDDFYTN-AIVKGYYKNHVKKVLTRINTITRIAYK 80 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~G~~~~~~~~fy~d-~~~~~~~~~~v~~vv~R~N~~tg~~yk 80 (316)
||++|.+|+++||+|+|+||. ..|+.... ........|.. ...++.+.+.|+.|++| |+
T Consensus 118 ld~~I~~a~~~gi~V~iD~H~---~~~~~~~~---------~~s~~~~~~~~~~~~~~~~~~~w~~ia~~--------f~ 177 (407)
T COG2730 118 LDEAINWAKKLGIYVLIDLHG---YPGGNNGH---------EHSGYTSDYKEENENVEATIDIWKFIANR--------FK 177 (407)
T ss_pred HHHHHHHHHhcCeeEEEEecc---cCCCCCCc---------CcccccccccccchhHHHHHHHHHHHHHh--------cc
Confidence 799999999999999999997 33443210 01112233443 56889999999999999 99
Q ss_pred CCCcEEEEeecCCCCCCCCCChHHHHHHHHHHHHHH-HhcCCCC---eEEEcc
Q 048104 81 DDPTIMAWELINEPRCQADYSGKTLNNWVQEMASYV-KSIDNKH---LLEIGL 129 (316)
Q Consensus 81 d~PaI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~I-ks~Dp~h---lVt~G~ 129 (316)
+.++|++.||+|||+.... .+.+..=.++....| +++...+ +|.++.
T Consensus 178 ~~~~VIg~~~~NEP~~~~~--~~~w~~~~~~A~~~v~~~i~~~~~~~~I~~~g 228 (407)
T COG2730 178 NYDTVIGFELINEPNGIVT--SETWNGGDDEAYDVVRNAILSNAPHWLIRVGG 228 (407)
T ss_pred CCCceeeeeeecCCcccCC--ccccccchHHHHHHHHhhhhhcCceEEEEECc
Confidence 9999999999999996110 001100015556666 4666666 555543
No 13
>PRK13511 6-phospho-beta-galactosidase; Provisional
Probab=98.83 E-value=4.9e-07 Score=89.96 Aligned_cols=238 Identities=15% Similarity=0.192 Sum_probs=141.7
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhcCCCCCCCCCCccCHHHHHHHHHHHHHHHhcccccccccccCC
Q 048104 3 DFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAGASVNSDDDFYTNAIVKGYYKNHVKKVLTRINTITRIAYKDD 82 (316)
Q Consensus 3 D~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~G~~~~~~~~fy~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd~ 82 (316)
|.+|+++.++||..+++|+. |+ + +.|....|+ |.+++..+.|.+|.+.+++| |+|
T Consensus 97 ~~lid~l~~~GI~P~VTL~H-~d----l---P~~L~~~GG--------W~n~~~v~~F~~YA~~~~~~--------fgd- 151 (469)
T PRK13511 97 HRLFAECHKRHVEPFVTLHH-FD----T---PEALHSNGD--------WLNRENIDHFVRYAEFCFEE--------FPE- 151 (469)
T ss_pred HHHHHHHHHcCCEEEEEecC-CC----C---cHHHHHcCC--------CCCHHHHHHHHHHHHHHHHH--------hCC-
Confidence 68999999999999999985 43 2 334433343 78899999999999999999 999
Q ss_pred CcEEEEeecCCCCCCCC---------CC--h---HHHHHH------HHHHHHHHHhcCCCCeEEEcccC--ccCC--CCC
Q 048104 83 PTIMAWELINEPRCQAD---------YS--G---KTLNNW------VQEMASYVKSIDNKHLLEIGLEG--FYGD--SIP 138 (316)
Q Consensus 83 PaI~aWeL~NEP~~~~~---------~~--~---~~~~~w------~~e~a~~Iks~Dp~hlVt~G~eG--~~~~--~~~ 138 (316)
|--|-..|||.+... +. . ..++.- ..+....+|+..|+--|.+-... ++.. .++
T Consensus 152 --Vk~W~T~NEP~~~~~~gy~~G~~~Pg~~~~~~~~~~~~hn~llAHa~A~~~~~~~~~~g~IGi~~~~~~~~P~~~~~~ 229 (469)
T PRK13511 152 --VKYWTTFNEIGPIGDGQYLVGKFPPGIKYDLAKVFQSHHNMMVAHARAVKLFKDKGYKGEIGVVHALPTKYPIDPDNP 229 (469)
T ss_pred --CCEEEEccchhhhhhcchhhcccCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCceEeeCCCCCH
Confidence 788999999986531 11 1 111222 23445678888777655543322 1111 111
Q ss_pred C-------------cCCCCCCCCcccchh-------------------------hccCC--CCceEEEeecCCCCCCCCC
Q 048104 139 D-------------KKQFNPGYQVGTDFI-------------------------SNNMI--KEIDFTTIHAYPDQWLPGK 178 (316)
Q Consensus 139 ~-------------~~~~np~~~~g~d~~-------------------------~~~~~--~~iD~~t~H~Yp~~w~~~~ 178 (316)
+ .+-.+|- ..| ++. ..... ..+||+.+..|........
T Consensus 230 ~d~~aa~~~~~~~~~~f~dp~-~~G-~Yp~~~~~~~~~~~~~~~~~l~~t~~d~~~ik~~~~~~DFiGiNyYt~~~v~~~ 307 (469)
T PRK13511 230 EDVRAAELEDIIHNKFILDAT-YLG-YYSEETMEGVNHILEANGGSLDIRDEDFEILKAAKDLNDFLGINYYMSDWMRAY 307 (469)
T ss_pred HHHHHHHHHHHHhhhcccchh-hCC-CCCHHHHHHHHHhhhhcCCCCCCCHHHHHHHhcCCCCCCEEEechhhcceeecC
Confidence 0 0001120 000 110 00111 2479999999965432100
Q ss_pred -------------------------------ChH-HHH--HHHHHHHHHHHHHhhhcCCC--cEEEEcccCCcCCC----
Q 048104 179 -------------------------------NYY-AQM--QFVQKWLESHWTDSKTILKK--PLVFSEFGKSCKEA---- 218 (316)
Q Consensus 179 -------------------------------~~~-~~~--~~~~~~i~~~~~~a~~~~~K--Pvvi~EfG~~~~~~---- 218 (316)
..+ ... +....=+...+....+.+++ |++|+|-|+.....
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gw~i~P~Gl~~~l~~~~~~Y~~~~pi~ITENG~~~~d~~~~~ 387 (469)
T PRK13511 308 DGETEIIHNGTGEKGSSKYQLKGVGERVKPPDVPTTDWDWIIYPQGLYDQLMRIKKDYPNYKKIYITENGLGYKDEFVDG 387 (469)
T ss_pred CCccccccCCCCccccccccccCccccccCCCCCcCCCCCeECcHHHHHHHHHHHHHcCCCCCEEEecCCcCCCCCcCCC
Confidence 000 000 00001122223223223665 79999999863321
Q ss_pred C-CCHHHHHHHHHHHHHHHHHHHHcCCceeeeeeeccccCCCCCCCCCc----eEEeC
Q 048104 219 G-FSINVRDSFLNTIYMNIYNLARNGGAIGGGMVWQLMAEGMQPYFDGY----EIVLS 271 (316)
Q Consensus 219 g-~~~~~r~~~~~~v~~~~~~~~~~~~~~~G~~~W~~~~~g~~~~~dg~----~i~~~ 271 (316)
+ .....|..|+++-+..+.++.+.|-++.|-+.|++.+. -.|.+|| ++++-
T Consensus 388 ~~~~D~~Ri~yl~~hl~~~~~Ai~dGv~v~GY~~WSl~Dn--fEW~~Gy~~RfGl~~V 443 (469)
T PRK13511 388 KTVDDDKRIDYVKQHLEVISDAISDGANVKGYFIWSLMDV--FSWSNGYEKRYGLFYV 443 (469)
T ss_pred CccCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecccccc--cchhcCccCccceEEE
Confidence 1 23468999999988888888888888999999999987 4565555 55544
No 14
>PLN02814 beta-glucosidase
Probab=98.82 E-value=6.1e-07 Score=89.87 Aligned_cols=233 Identities=18% Similarity=0.257 Sum_probs=136.9
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhc-CCCCCCCCCCccCHHHHHHHHHHHHHHHhcccccccccccC
Q 048104 3 DFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAA-GASVNSDDDFYTNAIVKGYYKNHVKKVLTRINTITRIAYKD 81 (316)
Q Consensus 3 D~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~-G~~~~~~~~fy~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd 81 (316)
+.+|+++.++||+.+++|+. |+. +.|.... |+ |.+++..+.|.+|.+.+++| |+|
T Consensus 120 ~~lId~l~~~GI~P~VTL~H-~dl-------P~~L~~~yGG--------W~n~~~i~~F~~YA~~~f~~--------fgd 175 (504)
T PLN02814 120 KNLIKELRSHGIEPHVTLYH-YDL-------PQSLEDEYGG--------WINRKIIEDFTAFADVCFRE--------FGE 175 (504)
T ss_pred HHHHHHHHHcCCceEEEecC-CCC-------CHHHHHhcCC--------cCChhHHHHHHHHHHHHHHH--------hCC
Confidence 68999999999999999984 432 3344332 33 78899999999999999999 999
Q ss_pred CCcEEEEeecCCCCCCCC--------C---C-------------hHHHHHH------HHHHHHHHHhc---CCCCeEEEc
Q 048104 82 DPTIMAWELINEPRCQAD--------Y---S-------------GKTLNNW------VQEMASYVKSI---DNKHLLEIG 128 (316)
Q Consensus 82 ~PaI~aWeL~NEP~~~~~--------~---~-------------~~~~~~w------~~e~a~~Iks~---Dp~hlVt~G 128 (316)
. |--|-..|||.+... + + .+.++.- .......+|+. .|+-.|.+-
T Consensus 176 r--Vk~WiT~NEP~~~~~~gy~~G~~pg~~~~~~~~~~~~~~~~~~~~~a~hn~llAHa~Av~~~~~~~~~~~~g~IGi~ 253 (504)
T PLN02814 176 D--VKLWTTINEATIFAIGSYGQGIRYGHCSPNKFINCSTGNSCTETYIAGHNMLLAHASASNLYKLKYKSKQRGSIGLS 253 (504)
T ss_pred c--CCEEEeccccchhhhcccccCcCCCCCCcccccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeEEEE
Confidence 6 678999999985421 0 0 0112221 23345666654 666555443
Q ss_pred ccC--ccCCC-CCC-------------cCCCCCCCCcccchh-------------------hccCCCCceEEEeecCCCC
Q 048104 129 LEG--FYGDS-IPD-------------KKQFNPGYQVGTDFI-------------------SNNMIKEIDFTTIHAYPDQ 173 (316)
Q Consensus 129 ~eG--~~~~~-~~~-------------~~~~np~~~~g~d~~-------------------~~~~~~~iD~~t~H~Yp~~ 173 (316)
... +|..+ .++ .+-.+|-. .| ++. ... ...+||+.+..|...
T Consensus 254 ~~~~~~~P~~~~~~D~~Aa~~~~~~~~~~f~dp~~-~G-~YP~~~~~~l~~~lp~~~~~d~~~i-kg~~DFiGiNyYt~~ 330 (504)
T PLN02814 254 IFAFGLSPYTNSKDDEIATQRAKAFLYGWMLKPLV-FG-DYPDEMKRTLGSRLPVFSEEESEQV-KGSSDFVGIIHYTTF 330 (504)
T ss_pred EeCceeecCCCCHHHHHHHHHHHHHhhhhhhHHHh-CC-CccHHHHHHHhcCCCCCCHHHHHHh-cCCCCEEEEcccccc
Confidence 322 12111 000 00001100 00 000 011 135799999999543
Q ss_pred CCCC---C--------Ch--H----------HH-H--HHHHHHHHHHHHHhhhcCCC-cEEEEcccCCcCCCC-CCHHHH
Q 048104 174 WLPG---K--------NY--Y----------AQ-M--QFVQKWLESHWTDSKTILKK-PLVFSEFGKSCKEAG-FSINVR 225 (316)
Q Consensus 174 w~~~---~--------~~--~----------~~-~--~~~~~~i~~~~~~a~~~~~K-Pvvi~EfG~~~~~~g-~~~~~r 225 (316)
.... . .. . .. . +....=+...+....+.+++ |++|+|-|+.....| .....|
T Consensus 331 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gWei~P~Gl~~~L~~~~~rY~~ppI~ITENG~~~~~~g~i~D~~R 410 (504)
T PLN02814 331 YVTNRPAPSIFPSMNEGFFTDMGAYIISAGNSSFFEFDATPWGLEGILEHIKQSYNNPPIYILENGMPMKHDSTLQDTPR 410 (504)
T ss_pred eeccCCCCCcccccCCCcccccccccCCCCCcCCCCCeECcHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCCcccCHHH
Confidence 2210 0 00 0 00 0 00011122223322223766 799999998643222 245789
Q ss_pred HHHHHHHHHHHHHHHHcCCceeeeeeeccccCCCCCCCCCc
Q 048104 226 DSFLNTIYMNIYNLARNGGAIGGGMVWQLMAEGMQPYFDGY 266 (316)
Q Consensus 226 ~~~~~~v~~~~~~~~~~~~~~~G~~~W~~~~~g~~~~~dg~ 266 (316)
..|+++-+..+.++...|-++.|-+.|++.+. -.|..||
T Consensus 411 i~Yl~~hl~~l~~Ai~dGv~V~GY~~WSllDn--fEW~~Gy 449 (504)
T PLN02814 411 VEFIQAYIGAVLNAIKNGSDTRGYFVWSMIDL--YELLGGY 449 (504)
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEeeccchhh--hchhccc
Confidence 99999988888888888888999999999987 3454444
No 15
>PRK09593 arb 6-phospho-beta-glucosidase; Reviewed
Probab=98.82 E-value=3.1e-07 Score=91.51 Aligned_cols=240 Identities=17% Similarity=0.249 Sum_probs=144.5
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhc-CCCCCCCCCCccCHHHHHHHHHHHHHHHhcccccccccccC
Q 048104 3 DFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAA-GASVNSDDDFYTNAIVKGYYKNHVKKVLTRINTITRIAYKD 81 (316)
Q Consensus 3 D~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~-G~~~~~~~~fy~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd 81 (316)
|.+|+++.++||..+++|+. |+ + +.|.... |+ |.+++..+.|.+|.+.+++| |+|
T Consensus 117 ~~lId~L~~~GI~P~VTL~H-~d----l---P~~L~~~~GG--------W~n~~~v~~F~~YA~~~~~~--------fgd 172 (478)
T PRK09593 117 EDIFKECHKYGIEPLVTITH-FD----C---PMHLIEEYGG--------WRNRKMVGFYERLCRTLFTR--------YKG 172 (478)
T ss_pred HHHHHHHHHcCCEEEEEecc-cC----C---CHHHHhhcCC--------CCChHHHHHHHHHHHHHHHH--------hcC
Confidence 68999999999999999984 43 2 3343321 32 77899999999999999999 999
Q ss_pred CCcEEEEeecCCCCCCCC----------CCh--H---HHHHH------HHHHHHHHHhcCCCCeEEEcccCc--cCCC-C
Q 048104 82 DPTIMAWELINEPRCQAD----------YSG--K---TLNNW------VQEMASYVKSIDNKHLLEIGLEGF--YGDS-I 137 (316)
Q Consensus 82 ~PaI~aWeL~NEP~~~~~----------~~~--~---~~~~w------~~e~a~~Iks~Dp~hlVt~G~eG~--~~~~-~ 137 (316)
. |--|-..|||.+... +.+ . .++.- ......++|++.|+-.|.+-.... +..+ .
T Consensus 173 r--Vk~WiT~NEP~~~~~~~~~~~g~~~~~g~~~~~~~~~a~h~~llAHa~A~~~~~~~~~~g~VGi~~~~~~~~P~~~~ 250 (478)
T PRK09593 173 L--VKYWLTFNEINMILHAPFMGAGLYFEEGENKEQVKYQAAHHELVASAIATKIAHEVDPENKVGCMLAAGQYYPNTCH 250 (478)
T ss_pred c--CCEEEeecchhhhhcccccccCcccCCCCchhhhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeeEeCCCC
Confidence 6 668999999985311 111 0 12222 234567788888876665544321 2111 0
Q ss_pred CC------------cCCCCCCCCcccchh---------------------hccCCCCceEEEeecCCCCCCCCCC-----
Q 048104 138 PD------------KKQFNPGYQVGTDFI---------------------SNNMIKEIDFTTIHAYPDQWLPGKN----- 179 (316)
Q Consensus 138 ~~------------~~~~np~~~~g~d~~---------------------~~~~~~~iD~~t~H~Yp~~w~~~~~----- 179 (316)
++ .+-.+|- ..| ++. .......+||+.+..|.........
T Consensus 251 ~~D~~aa~~~~~~~~~fld~~-~~G-~YP~~~~~~~~~~~~~~~~~~~d~~~ik~g~~DFlGiNyYt~~~v~~~~~~~~~ 328 (478)
T PRK09593 251 PEDVWAAMKEDRENYFFIDVQ-ARG-EYPNYAKKRFEREGITIEMTEEDLELLKENTVDFISFSYYSSRVASGDPKVNEK 328 (478)
T ss_pred HHHHHHHHHHHHHhhhhhhhh-hCC-CccHHHHHHHHhcCCCCCCCHHHHHHHhcCCCCEEEEecccCcccccCCCCCCC
Confidence 00 0001110 000 010 0011245799999999654321100
Q ss_pred ----h------H--HHH----HHHHHHHHHHHHHhhhcCCCcEEEEcccCCcCC----CC-CCHHHHHHHHHHHHHHHHH
Q 048104 180 ----Y------Y--AQM----QFVQKWLESHWTDSKTILKKPLVFSEFGKSCKE----AG-FSINVRDSFLNTIYMNIYN 238 (316)
Q Consensus 180 ----~------~--~~~----~~~~~~i~~~~~~a~~~~~KPvvi~EfG~~~~~----~g-~~~~~r~~~~~~v~~~~~~ 238 (316)
. + ... +....-|...+....+.+++|++|+|-|+.... .| .....|..|++.-+..+..
T Consensus 329 ~~~~~~~~~~~p~~~~~~~gw~i~P~Gl~~~l~~~~~~Y~~Pi~ItENG~~~~d~~~~~g~i~D~~Ri~yl~~hl~~~~~ 408 (478)
T PRK09593 329 TAGNIFASLKNPYLKASEWGWQIDPLGLRITLNTIWDRYQKPMFIVENGLGAVDKPDENGYVEDDYRIDYLAAHIKAMRD 408 (478)
T ss_pred CCCCccccccCCCcccCCCCCEECHHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCCCCccCCHHHHHHHHHHHHHHHH
Confidence 0 0 000 001112333333333348899999999987432 11 2356899999998888888
Q ss_pred HHH-cCCceeeeeeeccccCCCCCCCCC-----ceEEeCC
Q 048104 239 LAR-NGGAIGGGMVWQLMAEGMQPYFDG-----YEIVLSQ 272 (316)
Q Consensus 239 ~~~-~~~~~~G~~~W~~~~~g~~~~~dg-----~~i~~~~ 272 (316)
+.+ .|-++.|-+.|++.+. -.|..| |++++-+
T Consensus 409 Ai~~dGv~v~GY~~WSl~Dn--~EW~~G~y~~RfGl~~VD 446 (478)
T PRK09593 409 AINEDGVELLGYTTWGCIDL--VSAGTGEMKKRYGFIYVD 446 (478)
T ss_pred HHHHcCCCEEEEeeccchHh--hcccCCCccCeeceEEEC
Confidence 874 7878999999999987 456566 5666543
No 16
>PLN02998 beta-glucosidase
Probab=98.79 E-value=2.8e-07 Score=92.10 Aligned_cols=239 Identities=15% Similarity=0.190 Sum_probs=140.1
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhc-CCCCCCCCCCccCHHHHHHHHHHHHHHHhcccccccccccC
Q 048104 3 DFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAA-GASVNSDDDFYTNAIVKGYYKNHVKKVLTRINTITRIAYKD 81 (316)
Q Consensus 3 D~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~-G~~~~~~~~fy~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd 81 (316)
+.+|+++.++||..+++|+. |+. +.|.... |+ |.+++..+.|.+|.+.+++| |+|
T Consensus 125 ~~lid~L~~~GIeP~VTL~H-~dl-------P~~L~~~yGG--------W~n~~~v~~F~~YA~~~~~~--------fgd 180 (497)
T PLN02998 125 NNLIDELITHGIQPHVTLHH-FDL-------PQALEDEYGG--------WLSQEIVRDFTAYADTCFKE--------FGD 180 (497)
T ss_pred HHHHHHHHHcCCceEEEecC-CCC-------CHHHHHhhCC--------cCCchHHHHHHHHHHHHHHH--------hcC
Confidence 68999999999999999984 432 3344332 32 67899999999999999999 999
Q ss_pred CCcEEEEeecCCCCCCCC--------CCh-----------------HHHHHH------HHHHHHHHHhc---CCCCeEEE
Q 048104 82 DPTIMAWELINEPRCQAD--------YSG-----------------KTLNNW------VQEMASYVKSI---DNKHLLEI 127 (316)
Q Consensus 82 ~PaI~aWeL~NEP~~~~~--------~~~-----------------~~~~~w------~~e~a~~Iks~---Dp~hlVt~ 127 (316)
. |--|-..|||.+... +.+ ..++.- ..+....+|+. +|+..|.+
T Consensus 181 r--Vk~WiT~NEP~~~~~~gy~~G~~~Pg~~~~~~~~~~~~~~~~~~~~~~~hn~llAHa~A~~~~~~~~~~~~~g~IGi 258 (497)
T PLN02998 181 R--VSHWTTINEVNVFALGGYDQGITPPARCSPPFGLNCTKGNSSIEPYIAVHNMLLAHASATILYKQQYKYKQHGSVGI 258 (497)
T ss_pred c--CCEEEEccCcchhhhcchhhcccCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcEEE
Confidence 6 668999999996431 000 012222 23334666665 66656655
Q ss_pred cccC--ccCCC-CCC-------------cCCCCCCCCcccchh----h--------------ccCCCCceEEEeecCCCC
Q 048104 128 GLEG--FYGDS-IPD-------------KKQFNPGYQVGTDFI----S--------------NNMIKEIDFTTIHAYPDQ 173 (316)
Q Consensus 128 G~eG--~~~~~-~~~-------------~~~~np~~~~g~d~~----~--------------~~~~~~iD~~t~H~Yp~~ 173 (316)
-... ++..+ +++ .+-..|- ..| ++. . ......+||+.++.|...
T Consensus 259 ~~~~~~~~P~~~~~~D~~aa~~~~~~~~~~f~dp~-~~G-~YP~~~~~~l~~~lp~~t~~d~~~i~~~~DFlGiNyYts~ 336 (497)
T PLN02998 259 SVYTYGAVPLTNSVKDKQATARVNDFYIGWILHPL-VFG-DYPETMKTNVGSRLPAFTEEESEQVKGAFDFVGVINYMAL 336 (497)
T ss_pred EEeCCeeecCCCCHHHHHHHHHHHHHHhhhhhhHH-hCC-CcCHHHHHHHhcCCCCCCHHHHHHhcCCCCEEEEchhcCc
Confidence 3322 12111 000 0000110 000 000 0 001235799999988544
Q ss_pred CCCC-C-C--h--H---------------HH----HHHHHHHHHHHHHHhhhcCCC-cEEEEcccCCcCCCC-CCHHHHH
Q 048104 174 WLPG-K-N--Y--Y---------------AQ----MQFVQKWLESHWTDSKTILKK-PLVFSEFGKSCKEAG-FSINVRD 226 (316)
Q Consensus 174 w~~~-~-~--~--~---------------~~----~~~~~~~i~~~~~~a~~~~~K-Pvvi~EfG~~~~~~g-~~~~~r~ 226 (316)
.... . . . . .. .+....=+...+....+.+++ |++|+|-|+.....| .....|.
T Consensus 337 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~i~P~Gl~~~L~~~~~rY~~ppI~ITENG~~~~~~g~v~D~~Ri 416 (497)
T PLN02998 337 YVKDNSSSLKPNLQDFNTDIAVEMTLVGNTSIENEYANTPWSLQQILLYVKETYGNPPVYILENGQMTPHSSSLVDTTRV 416 (497)
T ss_pred ccccCCCcCCCCccccccccccccccCCCcCCCCCCEEChHHHHHHHHHHHHHcCCCCEEEeCCCCccCCCCcccCHHHH
Confidence 3210 0 0 0 0 00 000011122333333333777 699999998754212 2357899
Q ss_pred HHHHHHHHHHHHHHHcCCceeeeeeeccccCCCCCCCCCc----eEEeC
Q 048104 227 SFLNTIYMNIYNLARNGGAIGGGMVWQLMAEGMQPYFDGY----EIVLS 271 (316)
Q Consensus 227 ~~~~~v~~~~~~~~~~~~~~~G~~~W~~~~~g~~~~~dg~----~i~~~ 271 (316)
.|++.-+..+.++...|-++.|.+.|++.+. -.|..|| ++++-
T Consensus 417 ~Yl~~hl~~~~kAi~dGv~V~GY~~WSl~Dn--fEW~~Gy~~RfGLv~V 463 (497)
T PLN02998 417 KYLSSYIKAVLHSLRKGSDVKGYFQWSLMDV--FELFGGYERSFGLLYV 463 (497)
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEeeccchhh--hchhccccCccceEEE
Confidence 9999988888888888888999999999987 3454444 55553
No 17
>PRK09589 celA 6-phospho-beta-glucosidase; Reviewed
Probab=98.78 E-value=5.3e-07 Score=89.81 Aligned_cols=241 Identities=19% Similarity=0.196 Sum_probs=143.0
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhc-CCCCCCCCCCccCHHHHHHHHHHHHHHHhcccccccccccC
Q 048104 3 DFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAA-GASVNSDDDFYTNAIVKGYYKNHVKKVLTRINTITRIAYKD 81 (316)
Q Consensus 3 D~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~-G~~~~~~~~fy~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd 81 (316)
+.+|+++.++||..+++|+. |+ + +.|.... |+ |.+++..+.|.+|.+.+++| |+|
T Consensus 111 ~~lid~L~~~GI~P~VTL~H-~d----l---P~~L~~~yGG--------W~n~~~i~~F~~YA~~~f~~--------fgd 166 (476)
T PRK09589 111 DDLFDECLKQGIEPVVTLSH-FE----M---PYHLVTEYGG--------WRNRKLIDFFVRFAEVVFTR--------YKD 166 (476)
T ss_pred HHHHHHHHHcCCEEEEEecC-CC----C---CHHHHHhcCC--------cCChHHHHHHHHHHHHHHHH--------hcC
Confidence 67999999999999999984 43 2 3343322 32 77899999999999999999 998
Q ss_pred CCcEEEEeecCCCCCCC-----------C----CCh----H-HHHHH------HHHHHHHHHhcCCCCeEEEcccC--cc
Q 048104 82 DPTIMAWELINEPRCQA-----------D----YSG----K-TLNNW------VQEMASYVKSIDNKHLLEIGLEG--FY 133 (316)
Q Consensus 82 ~PaI~aWeL~NEP~~~~-----------~----~~~----~-~~~~w------~~e~a~~Iks~Dp~hlVt~G~eG--~~ 133 (316)
. |--|-..|||.+.. . +.+ . .++.- ..+...++|++.|+.-|.+-... +|
T Consensus 167 r--Vk~WiT~NEp~~~~~~~~~~~~~~~~g~~~~pg~~~~~~~~~~~h~~llAha~A~~~~~~~~~~~~iG~~~~~~~~~ 244 (476)
T PRK09589 167 K--VKYWMTFNEINNQANFSEDFAPFTNSGILYSPGEDREQIMYQAAHYELVASALAVKTGHEINPDFQIGCMIAMCPIY 244 (476)
T ss_pred C--CCEEEEecchhhhhccccccCCccccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEeCCeee
Confidence 5 66899999998531 0 111 0 11222 23345678888887655443222 22
Q ss_pred CCC-CCC------------cCCCCCC----C---------Cccc--chh----hccCCCCceEEEeecCCCCCCCC---C
Q 048104 134 GDS-IPD------------KKQFNPG----Y---------QVGT--DFI----SNNMIKEIDFTTIHAYPDQWLPG---K 178 (316)
Q Consensus 134 ~~~-~~~------------~~~~np~----~---------~~g~--d~~----~~~~~~~iD~~t~H~Yp~~w~~~---~ 178 (316)
..+ .++ .+-.+|. + ..|. .|. ..+....+||+.+..|....... .
T Consensus 245 P~~~~~~d~~aa~~~~~~~~~f~d~~~~G~YP~~~~~~~~~~~~~~~~t~~d~~~l~~g~~DFlGiNyYts~~v~~~~~~ 324 (476)
T PRK09589 245 PLTCAPNDMMMATKAMHRRYWFTDVHVRGYYPQHILNYFARKGFNLDITPEDNAILAEGCVDYIGFSYYMSFATKFHEDN 324 (476)
T ss_pred eCCCCHHHHHHHHHHHHhccceecceeCCCCcHHHHHHHHhcCCCCCCCHHHHHHHhcCCCCEEEEecccCcccccCCCC
Confidence 111 110 0001120 0 0000 000 00113457999999997644311 0
Q ss_pred C---h------------HHH---HHHHHHHHHHHHHHhhhcCCCcEEEEcccCCcCC----CC-CCHHHHHHHHHHHHHH
Q 048104 179 N---Y------------YAQ---MQFVQKWLESHWTDSKTILKKPLVFSEFGKSCKE----AG-FSINVRDSFLNTIYMN 235 (316)
Q Consensus 179 ~---~------------~~~---~~~~~~~i~~~~~~a~~~~~KPvvi~EfG~~~~~----~g-~~~~~r~~~~~~v~~~ 235 (316)
. . +.. -+....-+...+....+.+++|++|+|=|+.... .| .....|..|+++-+.+
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~gw~i~P~Gl~~~L~~~~~~Y~~Pi~ItENG~~~~d~~~~~g~i~D~~Ri~Yl~~hl~~ 404 (476)
T PRK09589 325 PQLDYVETRDLVSNPYVKASEWGWQIDPAGLRYSLNWFWDHYQLPLFIVENGFGAIDQREADGTVNDHYRIDYLAAHIRE 404 (476)
T ss_pred CCCCcccccccccCCCcccCCCCCccCcHHHHHHHHHHHHhcCCCEEEEeCCcccCCCCCcCCcccCHHHHHHHHHHHHH
Confidence 0 0 000 0001111233333333348899999999987432 11 2356899999998888
Q ss_pred HHHHH-HcCCceeeeeeeccccCCCCCCCCC-----ceEEeC
Q 048104 236 IYNLA-RNGGAIGGGMVWQLMAEGMQPYFDG-----YEIVLS 271 (316)
Q Consensus 236 ~~~~~-~~~~~~~G~~~W~~~~~g~~~~~dg-----~~i~~~ 271 (316)
+..+. ..|-++.|-+.|++.+. -.|.+| |++++-
T Consensus 405 ~~~Ai~~dGv~V~GY~~WSl~Dn--~Ew~~G~y~~RfGlv~V 444 (476)
T PRK09589 405 MKKAVVEDGVDLMGYTPWGCIDL--VSAGTGEMKKRYGFIYV 444 (476)
T ss_pred HHHHHHhcCCCeEEEeecccccc--ccccCCccccceeeEEE
Confidence 88887 67878999999999987 456566 455553
No 18
>PF00331 Glyco_hydro_10: Glycosyl hydrolase family 10; InterPro: IPR001000 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 10 GH10 from CAZY comprises enzymes with a number of known activities; xylanase (3.2.1.8 from EC); endo-1,3-beta-xylanase (3.2.1.32 from EC); cellobiohydrolase (3.2.1.91 from EC). These enzymes were formerly known as cellulase family F. The microbial degradation of cellulose and xylans requires several types of enzymes such as endoglucanases (3.2.1.4 from EC), cellobiohydrolases (3.2.1.91 from EC) (exoglucanases), or xylanases (3.2.1.8 from EC) [, ]. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family F [] or as the glycosyl hydrolases family 10 []. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1UQZ_A 1UQY_A 1UR2_A 1UR1_A 2CNC_A 1OD8_A 1E0W_A 1E0V_A 1V0M_A 1E0X_B ....
Probab=98.78 E-value=4.1e-07 Score=86.27 Aligned_cols=210 Identities=17% Similarity=0.206 Sum_probs=129.8
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhcCCCCCCCCCCccC---HHHHHHHHHHHHHHHhccccccccc
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAGASVNSDDDFYTN---AIVKGYYKNHVKKVLTRINTITRIA 78 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~G~~~~~~~~fy~d---~~~~~~~~~~v~~vv~R~N~~tg~~ 78 (316)
.|.+++.|+++||+|---.. -|+. +-++|.... .-++. +.+++..+++|++|++|
T Consensus 61 ~D~~~~~a~~~g~~vrGH~L-vW~~-----~~P~w~~~~--------~~~~~~~~~~~~~~l~~~I~~v~~~-------- 118 (320)
T PF00331_consen 61 ADAILDWARENGIKVRGHTL-VWHS-----QTPDWVFNL--------ANGSPDEKEELRARLENHIKTVVTR-------- 118 (320)
T ss_dssp HHHHHHHHHHTT-EEEEEEE-EESS-----SS-HHHHTS--------TTSSBHHHHHHHHHHHHHHHHHHHH--------
T ss_pred hhHHHHHHHhcCcceeeeeE-EEcc-----cccceeeec--------cCCCcccHHHHHHHHHHHHHHHHhH--------
Confidence 59999999999999973110 2332 235676431 01222 24899999999999999
Q ss_pred ccCCCcEEEEeecCCCCCCCCC----ChHHH-----HHHHHHHHHHHHhcCCCCeEEEcccCccCCCCCCcCCCCCCCCc
Q 048104 79 YKDDPTIMAWELINEPRCQADY----SGKTL-----NNWVQEMASYVKSIDNKHLLEIGLEGFYGDSIPDKKQFNPGYQV 149 (316)
Q Consensus 79 ykd~PaI~aWeL~NEP~~~~~~----~~~~~-----~~w~~e~a~~Iks~Dp~hlVt~G~eG~~~~~~~~~~~~np~~~~ 149 (316)
|++...|-+||+.|||...... ....+ ..++.++.++.|+.||+....+..- +...+.. .. .
T Consensus 119 y~~~g~i~~WDVvNE~i~~~~~~~~~r~~~~~~~lG~~yi~~aF~~A~~~~P~a~L~~NDy---~~~~~~k----~~--~ 189 (320)
T PF00331_consen 119 YKDKGRIYAWDVVNEAIDDDGNPGGLRDSPWYDALGPDYIADAFRAAREADPNAKLFYNDY---NIESPAK----RD--A 189 (320)
T ss_dssp TTTTTTESEEEEEES-B-TTSSSSSBCTSHHHHHHTTCHHHHHHHHHHHHHTTSEEEEEES---STTSTHH----HH--H
T ss_pred hccccceEEEEEeeecccCCCccccccCChhhhcccHhHHHHHHHHHHHhCCCcEEEeccc---cccchHH----HH--H
Confidence 9999999999999999865420 01111 3578999999999999988887653 3222100 00 0
Q ss_pred ccchhhccCCC--CceEE--EeecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhhcCCCcEEEEcccCCcCCCC---CCH
Q 048104 150 GTDFISNNMIK--EIDFT--TIHAYPDQWLPGKNYYAQMQFVQKWLESHWTDSKTILKKPLVFSEFGKSCKEAG---FSI 222 (316)
Q Consensus 150 g~d~~~~~~~~--~iD~~--t~H~Yp~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~KPvvi~EfG~~~~~~g---~~~ 222 (316)
-...+..+... .||-+ ..|+-.... . .-+...++.... +|.||.|+|+.+...... ...
T Consensus 190 ~~~lv~~l~~~gvpIdgIG~Q~H~~~~~~-----~--------~~i~~~l~~~~~-~Gl~i~ITElDv~~~~~~~~~~~~ 255 (320)
T PF00331_consen 190 YLNLVKDLKARGVPIDGIGLQSHFDAGYP-----P--------EQIWNALDRFAS-LGLPIHITELDVRDDDNPPDAEEE 255 (320)
T ss_dssp HHHHHHHHHHTTHCS-EEEEEEEEETTSS-----H--------HHHHHHHHHHHT-TTSEEEEEEEEEESSSTTSCHHHH
T ss_pred HHHHHHHHHhCCCccceechhhccCCCCC-----H--------HHHHHHHHHHHH-cCCceEEEeeeecCCCCCcchHHH
Confidence 00111111111 14433 667765542 1 123334444454 899999999998876422 125
Q ss_pred HHHHHHHHHHHHHHHHHHHcCC--ceeeeeeeccccCCCCCC
Q 048104 223 NVRDSFLNTIYMNIYNLARNGG--AIGGGMVWQLMAEGMQPY 262 (316)
Q Consensus 223 ~~r~~~~~~v~~~~~~~~~~~~--~~~G~~~W~~~~~g~~~~ 262 (316)
+.|+++++.++..+++. + .+.|..+|.+.+. .+|
T Consensus 256 ~~qA~~~~~~~~~~~~~----~~~~v~git~Wg~~D~--~sW 291 (320)
T PF00331_consen 256 EAQAEYYRDFLTACFSH----PPAAVEGITWWGFTDG--YSW 291 (320)
T ss_dssp HHHHHHHHHHHHHHHHT----THCTEEEEEESSSBTT--GST
T ss_pred HHHHHHHHHHHHHHHhC----CccCCCEEEEECCCCC--Ccc
Confidence 67788888888766554 4 5999999999986 355
No 19
>TIGR01233 lacG 6-phospho-beta-galactosidase. This enzyme is part of the tagatose-6-phosphate pathway of galactose-6-phosphate degradation.
Probab=98.73 E-value=6.8e-07 Score=88.87 Aligned_cols=239 Identities=14% Similarity=0.181 Sum_probs=144.0
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhcCCCCCCCCCCccCHHHHHHHHHHHHHHHhcccccccccccCC
Q 048104 3 DFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAGASVNSDDDFYTNAIVKGYYKNHVKKVLTRINTITRIAYKDD 82 (316)
Q Consensus 3 D~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~G~~~~~~~~fy~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd~ 82 (316)
|.+|+++.++||+.+++|+. |+ + +.|....|+ |.+++..+.|.+|.+.+++| |+ +
T Consensus 96 ~~lid~l~~~GI~P~VTL~H-~d----l---P~~L~~~GG--------W~n~~~v~~F~~YA~~~f~~--------fg-d 150 (467)
T TIGR01233 96 HKLFAECHKRHVEPFVTLHH-FD----T---PEALHSNGD--------FLNRENIEHFIDYAAFCFEE--------FP-E 150 (467)
T ss_pred HHHHHHHHHcCCEEEEeccC-CC----C---cHHHHHcCC--------CCCHHHHHHHHHHHHHHHHH--------hC-C
Confidence 68999999999999999985 43 2 334433343 78899999999999999999 98 3
Q ss_pred CcEEEEeecCCCCCCCC---------CC--h---HHHHHH------HHHHHHHHHhcCCCCeEEEcccCc--cCCC--CC
Q 048104 83 PTIMAWELINEPRCQAD---------YS--G---KTLNNW------VQEMASYVKSIDNKHLLEIGLEGF--YGDS--IP 138 (316)
Q Consensus 83 PaI~aWeL~NEP~~~~~---------~~--~---~~~~~w------~~e~a~~Iks~Dp~hlVt~G~eG~--~~~~--~~ 138 (316)
|--|-..|||.+... +. . ..++.- ..+....+|+.+|+..|.+-.... |..+ ++
T Consensus 151 --Vk~WiT~NEP~~~~~~gy~~G~~~Pg~~~~~~~~~~a~hn~l~AHa~A~~~~~~~~~~~~IGi~~~~~~~~P~~~~~~ 228 (467)
T TIGR01233 151 --VNYWTTFNEIGPIGDGQYLVGKFPPGIKYDLAKVFQSHHNMMVSHARAVKLYKDKGYKGEIGVVHALPTKYPYDPENP 228 (467)
T ss_pred --CCEEEEecchhhhhhccchhcccCCCccchhHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCceeEECCCCCH
Confidence 778999999986421 11 0 112222 244567788888887776544321 2111 11
Q ss_pred C-------------cCCCCCCCCcccchh-------------------------hccC--CCCceEEEeecCCCCCCCCC
Q 048104 139 D-------------KKQFNPGYQVGTDFI-------------------------SNNM--IKEIDFTTIHAYPDQWLPGK 178 (316)
Q Consensus 139 ~-------------~~~~np~~~~g~d~~-------------------------~~~~--~~~iD~~t~H~Yp~~w~~~~ 178 (316)
+ .+-.+|- ..| ++. .... ...+||+.+..|-.......
T Consensus 229 ~D~~aA~~~~~~~~~~f~d~~-~~G-~Yp~~~~~~~~~~~~~~~~~~~~~~~d~~~i~~~~~~~DFlGinyYt~~~v~~~ 306 (467)
T TIGR01233 229 ADVRAAELEDIIHNKFILDAT-YLG-HYSDKTMEGVNHILAENGGELDLRDEDFQALDAAKDLNDFLGINYYMSDWMQAF 306 (467)
T ss_pred HHHHHHHHHHHHhhhcccchh-hCC-CCCHHHHHHHHhhhhccCCCCCCCHHHHHHHhccCCCCCEEEEccccceeeccC
Confidence 0 0001120 000 010 0000 23569999999854321100
Q ss_pred ----------------------Ch---------H-HH--HHHHHHHHHHHHHHhhhcCCC--cEEEEcccCCcCC---CC
Q 048104 179 ----------------------NY---------Y-AQ--MQFVQKWLESHWTDSKTILKK--PLVFSEFGKSCKE---AG 219 (316)
Q Consensus 179 ----------------------~~---------~-~~--~~~~~~~i~~~~~~a~~~~~K--Pvvi~EfG~~~~~---~g 219 (316)
.. + .. -+....-+...+....+.+++ |++|+|-|+.... .|
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~gw~i~P~Gl~~~L~~~~~~Y~~~ppi~ItENG~~~~d~~~~g 386 (467)
T TIGR01233 307 DGETEIIHNGKGEKGSSKYQIKGVGRRVAPDYVPRTDWDWIIYPEGLYDQIMRVKNDYPNYKKIYITENGLGYKDEFVDN 386 (467)
T ss_pred CCccccccCCccccCcccccCCCcccccCCCCCCcCCCCCeeChHHHHHHHHHHHHHcCCCCCEEEeCCCCCCCCCCCCC
Confidence 00 0 00 000111233333333334776 7999999987432 11
Q ss_pred -CCHHHHHHHHHHHHHHHHHHHHcCCceeeeeeeccccCCCCCCCCC----ceEEeCC
Q 048104 220 -FSINVRDSFLNTIYMNIYNLARNGGAIGGGMVWQLMAEGMQPYFDG----YEIVLSQ 272 (316)
Q Consensus 220 -~~~~~r~~~~~~v~~~~~~~~~~~~~~~G~~~W~~~~~g~~~~~dg----~~i~~~~ 272 (316)
.....|..|+++-+..+.++...|-.+.|.+.|++.+. -.|..| |++++-+
T Consensus 387 ~i~D~~Ri~Yl~~hl~~~~~Ai~dGv~v~GY~~WSl~Dn--~Ew~~Gy~~RfGLv~VD 442 (467)
T TIGR01233 387 TVYDDGRIDYVKQHLEVLSDAIADGANVKGYFIWSLMDV--FSWSNGYEKRYGLFYVD 442 (467)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeeccchhh--hchhccccCccceEEEC
Confidence 23568999999988888888888888999999999987 344444 4666543
No 20
>PRK15014 6-phospho-beta-glucosidase BglA; Provisional
Probab=98.71 E-value=1.1e-06 Score=87.51 Aligned_cols=241 Identities=19% Similarity=0.214 Sum_probs=142.6
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhc-CCCCCCCCCCccCHHHHHHHHHHHHHHHhcccccccccccC
Q 048104 3 DFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAA-GASVNSDDDFYTNAIVKGYYKNHVKKVLTRINTITRIAYKD 81 (316)
Q Consensus 3 D~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~-G~~~~~~~~fy~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd 81 (316)
|.+|+++.++||+.+++|+. |+ + +.|.... |+ |.++++.+.|.++.+.+++| |+|
T Consensus 113 ~~lid~l~~~GI~P~vTL~H-~d----l---P~~L~~~yGG--------W~n~~~~~~F~~Ya~~~f~~--------fgd 168 (477)
T PRK15014 113 DDMFDELLKYNIEPVITLSH-FE----M---PLHLVQQYGS--------WTNRKVVDFFVRFAEVVFER--------YKH 168 (477)
T ss_pred HHHHHHHHHcCCEEEEEeeC-CC----C---CHHHHHhcCC--------CCChHHHHHHHHHHHHHHHH--------hcC
Confidence 78999999999999999974 33 2 3343322 32 67899999999999999999 999
Q ss_pred CCcEEEEeecCCCCCC-----C-----C-----CCh----H-HHHHH------HHHHHHHHHhcCCCCeEEEcccC--cc
Q 048104 82 DPTIMAWELINEPRCQ-----A-----D-----YSG----K-TLNNW------VQEMASYVKSIDNKHLLEIGLEG--FY 133 (316)
Q Consensus 82 ~PaI~aWeL~NEP~~~-----~-----~-----~~~----~-~~~~w------~~e~a~~Iks~Dp~hlVt~G~eG--~~ 133 (316)
. |--|-..|||.+. . . +.+ . .++.- ..+....+|+..|...|.+-... +|
T Consensus 169 r--Vk~WiT~NEp~~~~~~~~~~~gy~~~g~~~~~~~~~~~~~~~~~h~~llAHa~A~~~~~~~~~~~~IGi~~~~~~~~ 246 (477)
T PRK15014 169 K--VKYWMTFNEINNQRNWRAPLFGYCCSGVVYTEHENPEETMYQVLHHQFVASALAVKAARRINPEMKVGCMLAMVPLY 246 (477)
T ss_pred c--CCEEEEecCcccccccccccccccccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCceec
Confidence 7 6689999999742 0 0 111 0 11222 23456778888887666554332 12
Q ss_pred CCC-CCC------------cCCCCCC----C---------Cccc--chh----hccCCCCceEEEeecCCCCCCCC----
Q 048104 134 GDS-IPD------------KKQFNPG----Y---------QVGT--DFI----SNNMIKEIDFTTIHAYPDQWLPG---- 177 (316)
Q Consensus 134 ~~~-~~~------------~~~~np~----~---------~~g~--d~~----~~~~~~~iD~~t~H~Yp~~w~~~---- 177 (316)
..+ .++ .+-.+|. + ..+. ++. .......+||+.+..|.......
T Consensus 247 P~~~~~~D~~Aa~~~~~~~~~f~d~~~~G~YP~~~~~~~~~~~~~~~~~~~d~~~i~~~~~DFlGiNyYt~~~v~~~~~~ 326 (477)
T PRK15014 247 PYSCNPDDVMFAQESMRERYVFTDVQLRGYYPSYVLNEWERRGFNIKMEDGDLDVLREGTCDYLGFSYYMTNAVKAEGGT 326 (477)
T ss_pred cCCCCHHHHHHHHHHHHhcccccccccCCCCCHHHHHHHHhcCCCCCCCHHHHHHHhcCCCCEEEEcceeCeeeccCCCC
Confidence 111 000 0011221 0 0000 000 00112457999999995432110
Q ss_pred -----------CCh--HHH---HHHHHHHHHHHHHHhhhcCCCcEEEEcccCCcCC----CC-CCHHHHHHHHHHHHHHH
Q 048104 178 -----------KNY--YAQ---MQFVQKWLESHWTDSKTILKKPLVFSEFGKSCKE----AG-FSINVRDSFLNTIYMNI 236 (316)
Q Consensus 178 -----------~~~--~~~---~~~~~~~i~~~~~~a~~~~~KPvvi~EfG~~~~~----~g-~~~~~r~~~~~~v~~~~ 236 (316)
.+. ... -+....-+...+....+.+++|++|+|-|+.... .| .....|..|+++-+..+
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~gw~i~P~Gl~~~l~~~~~~Y~~Pi~ItENG~~~~d~~~~~g~i~D~~Ri~Yl~~hl~~l 406 (477)
T PRK15014 327 GDAISGFEGSVPNPYVKASDWGWQIDPVGLRYALCELYERYQKPLFIVENGFGAYDKVEEDGSINDDYRIDYLRAHIEEM 406 (477)
T ss_pred CCCccccccccCCCCcccCCCCCccCcHHHHHHHHHHHHhcCCCEEEeCCCCCCCCCcCcCCccCCHHHHHHHHHHHHHH
Confidence 000 000 0001111233333333348899999999987432 11 23568999999988888
Q ss_pred HHHHH-cCCceeeeeeeccccCCCCCCCCC-----ceEEeC
Q 048104 237 YNLAR-NGGAIGGGMVWQLMAEGMQPYFDG-----YEIVLS 271 (316)
Q Consensus 237 ~~~~~-~~~~~~G~~~W~~~~~g~~~~~dg-----~~i~~~ 271 (316)
.++.+ .|-.+.|-+.|++.+. -.|..| |++++-
T Consensus 407 ~~Ai~~dGv~v~GY~~WSl~Dn--fEw~~G~y~~RfGl~~V 445 (477)
T PRK15014 407 KKAVTYDGVDLMGYTPWGCIDC--VSFTTGQYSKRYGFIYV 445 (477)
T ss_pred HHHHHHcCCCEEEEeeccchhh--hcccCCCccCccceEEE
Confidence 88885 7888999999999987 345455 455543
No 21
>PLN02849 beta-glucosidase
Probab=98.70 E-value=1.7e-06 Score=86.69 Aligned_cols=238 Identities=18% Similarity=0.208 Sum_probs=138.9
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhc-CCCCCCCCCCccCHHHHHHHHHHHHHHHhcccccccccccC
Q 048104 3 DFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAA-GASVNSDDDFYTNAIVKGYYKNHVKKVLTRINTITRIAYKD 81 (316)
Q Consensus 3 D~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~-G~~~~~~~~fy~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd 81 (316)
|.+|+++.++||+.+++|+. |+. +.|.... |+ |.|++..+.|.+|.+.+++| |+|
T Consensus 122 ~~lid~l~~~GI~P~VTL~H-~dl-------P~~L~~~yGG--------W~nr~~v~~F~~YA~~~f~~--------fgD 177 (503)
T PLN02849 122 KNFIQELVKHGIEPHVTLFH-YDH-------PQYLEDDYGG--------WINRRIIKDFTAYADVCFRE--------FGN 177 (503)
T ss_pred HHHHHHHHHcCCeEEEeecC-CCC-------cHHHHHhcCC--------cCCchHHHHHHHHHHHHHHH--------hcC
Confidence 68999999999999999984 432 3344332 43 78899999999999999999 999
Q ss_pred CCcEEEEeecCCCCCCCC---------C---C--------h----HHHHHH------HHHHHHHHHhc---CCCCeEEEc
Q 048104 82 DPTIMAWELINEPRCQAD---------Y---S--------G----KTLNNW------VQEMASYVKSI---DNKHLLEIG 128 (316)
Q Consensus 82 ~PaI~aWeL~NEP~~~~~---------~---~--------~----~~~~~w------~~e~a~~Iks~---Dp~hlVt~G 128 (316)
. |--|-..|||.+... + . + ..++.- .......+|++ .|+-.|.+-
T Consensus 178 r--Vk~WiT~NEP~~~~~~gy~~G~~~Pg~~~~~~~~~~~~~~~~~~~~a~hn~llAHa~A~~~~~~~~~~~~~~~IGi~ 255 (503)
T PLN02849 178 H--VKFWTTINEANIFTIGGYNDGITPPGRCSSPGRNCSSGNSSTEPYIVGHNLLLAHASVSRLYKQKYKDMQGGSIGFS 255 (503)
T ss_pred c--CCEEEEecchhhhhhchhhhccCCCCccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEE
Confidence 6 667999999985421 1 0 0 011221 23345666765 366555553
Q ss_pred ccC--ccCCC-CCC-------------cCCCCCCCCcccchh-------------------hccCCCCceEEEeecCCCC
Q 048104 129 LEG--FYGDS-IPD-------------KKQFNPGYQVGTDFI-------------------SNNMIKEIDFTTIHAYPDQ 173 (316)
Q Consensus 129 ~eG--~~~~~-~~~-------------~~~~np~~~~g~d~~-------------------~~~~~~~iD~~t~H~Yp~~ 173 (316)
..+ +|..+ .++ .+-.+|- -.| ++. ... ...+||+.++.|-..
T Consensus 256 ~~~~~~~P~~~~~~D~~AA~~~~~~~~~~f~dp~-~~G-~YP~~~~~~l~~~lp~~~~~d~~~i-~~~~DFlGiNyYt~~ 332 (503)
T PLN02849 256 LFALGFTPSTSSKDDDIATQRAKDFYLGWMLEPL-IFG-DYPDEMKRTIGSRLPVFSKEESEQV-KGSSDFIGVIHYLAA 332 (503)
T ss_pred EECceeecCCCCHHHHHHHHHHHHHhhhhhhHHH-hCC-CccHHHHHHHhcCCCCCCHHHHHHh-cCCCCEEEEeccchh
Confidence 322 12111 000 0000110 000 000 001 235799999998543
Q ss_pred CCCC---C-------Ch--------HHH----HHHHHHHHHHHHHHhhhcCCC-cEEEEcccCCcCC--CC-CCHHHHHH
Q 048104 174 WLPG---K-------NY--------YAQ----MQFVQKWLESHWTDSKTILKK-PLVFSEFGKSCKE--AG-FSINVRDS 227 (316)
Q Consensus 174 w~~~---~-------~~--------~~~----~~~~~~~i~~~~~~a~~~~~K-Pvvi~EfG~~~~~--~g-~~~~~r~~ 227 (316)
.... . .. ... .+....=+...+....+.+++ |++|+|-|..... .+ .....|.+
T Consensus 333 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gw~i~P~Gl~~~L~~~~~rY~~pPi~ITENG~~~~d~~~~~v~D~~Ri~ 412 (503)
T PLN02849 333 SVTNIKIKPSLSGNPDFYSDMGVSLGKFSAFEYAVAPWAMESVLEYIKQSYGNPPVYILENGTPMKQDLQLQQKDTPRIE 412 (503)
T ss_pred hcccCCCCCCCCCCCccccccCCCCCccCCCCCeEChHHHHHHHHHHHHhcCCCCEEEeCCCCCccCCCCCcccCHHHHH
Confidence 2210 0 00 000 000011122223222223777 7999999987432 11 23568999
Q ss_pred HHHHHHHHHHHHHHcCCceeeeeeeccccCCCCCCCCCc----eEEeC
Q 048104 228 FLNTIYMNIYNLARNGGAIGGGMVWQLMAEGMQPYFDGY----EIVLS 271 (316)
Q Consensus 228 ~~~~v~~~~~~~~~~~~~~~G~~~W~~~~~g~~~~~dg~----~i~~~ 271 (316)
|+++-+..+.++...|-++.|.+.|++.+. -.|..|| ++++-
T Consensus 413 Yl~~hL~~l~~Ai~dGv~V~GY~~WSl~Dn--fEW~~Gy~~RfGLi~V 458 (503)
T PLN02849 413 YLHAYIGAVLKAVRNGSDTRGYFVWSFMDL--YELLKGYEFSFGLYSV 458 (503)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeeccchhh--hchhccccCccceEEE
Confidence 999988888888888888999999999987 3454444 55543
No 22
>PRK09852 cryptic 6-phospho-beta-glucosidase; Provisional
Probab=98.68 E-value=1.7e-06 Score=86.11 Aligned_cols=241 Identities=17% Similarity=0.249 Sum_probs=142.4
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhc-CCCCCCCCCCccCHHHHHHHHHHHHHHHhccccccccccc
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAA-GASVNSDDDFYTNAIVKGYYKNHVKKVLTRINTITRIAYK 80 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~-G~~~~~~~~fy~d~~~~~~~~~~v~~vv~R~N~~tg~~yk 80 (316)
.|.+|+++.++||.+|++|+. |+ . +.|.... |+ |.++++.+.|.++++.+++| |+
T Consensus 114 Y~~~i~~l~~~gi~p~VtL~H-~~----~---P~~l~~~~GG--------W~~~~~~~~F~~ya~~~~~~--------fg 169 (474)
T PRK09852 114 YRSVFEECKKYGIEPLVTLCH-FD----V---PMHLVTEYGS--------WRNRKMVEFFSRYARTCFEA--------FD 169 (474)
T ss_pred HHHHHHHHHHcCCEEEEEeeC-CC----C---CHHHHHhcCC--------CCCHHHHHHHHHHHHHHHHH--------hc
Confidence 378999999999999999984 33 2 2333221 32 77899999999999999999 99
Q ss_pred CCCcEEEEeecCCCCCCCC----------CCh----H-HHHHH------HHHHHHHHHhcCCCCeEEEcccC--ccCCC-
Q 048104 81 DDPTIMAWELINEPRCQAD----------YSG----K-TLNNW------VQEMASYVKSIDNKHLLEIGLEG--FYGDS- 136 (316)
Q Consensus 81 d~PaI~aWeL~NEP~~~~~----------~~~----~-~~~~w------~~e~a~~Iks~Dp~hlVt~G~eG--~~~~~- 136 (316)
|. |--|-..|||.+... +.+ . .++.- ..+...++|++.|+-.|.+-... +|..+
T Consensus 170 d~--Vk~WiTfNEPn~~~~~gy~~~g~~~~p~~~~~~~~~~~~hn~llAHa~A~~~~~~~~~~~~IGi~~~~~~~~P~~~ 247 (474)
T PRK09852 170 GL--VKYWLTFNEINIMLHSPFSGAGLVFEEGENQDQVKYQAAHHELVASALATKIAHEVNPQNQVGCMLAGGNFYPYSC 247 (474)
T ss_pred Cc--CCeEEeecchhhhhccCccccCcccCCCCCchHhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeeeeCCC
Confidence 96 557999999984310 111 0 12222 23445667888887655554332 22111
Q ss_pred CCC------------cCCCCCCCCcccchh----h----------------ccCCCCceEEEeecCCCCCCCCC------
Q 048104 137 IPD------------KKQFNPGYQVGTDFI----S----------------NNMIKEIDFTTIHAYPDQWLPGK------ 178 (316)
Q Consensus 137 ~~~------------~~~~np~~~~g~d~~----~----------------~~~~~~iD~~t~H~Yp~~w~~~~------ 178 (316)
.++ ..-..|. ..| ++. . ......+||+.+..|........
T Consensus 248 ~~~d~~AA~~~~~~~~~~~d~~-~~G-~YP~~~~~~~~~~~~~p~~~~~d~~~i~~~~DFlGiNyYt~~~v~~~~~~~~~ 325 (474)
T PRK09852 248 KPEDVWAALEKDRENLFFIDVQ-ARG-AYPAYSARVFREKGVTIDKAPGDDEILKNTVDFVSFSYYASRCASAEMNANNS 325 (474)
T ss_pred CHHHHHHHHHHHHHhhhhcchh-hCC-CccHHHHHHHHhcCCCCCCCHHHHHHhcCCCCEEEEccccCeecccCCCCCCC
Confidence 010 0000110 000 000 0 00123579999999954332100
Q ss_pred ---Ch---------HHH-H--HHHHHHHHHHHHHhhhcCCCcEEEEcccCCcCCC----C-CCHHHHHHHHHHHHHHHHH
Q 048104 179 ---NY---------YAQ-M--QFVQKWLESHWTDSKTILKKPLVFSEFGKSCKEA----G-FSINVRDSFLNTIYMNIYN 238 (316)
Q Consensus 179 ---~~---------~~~-~--~~~~~~i~~~~~~a~~~~~KPvvi~EfG~~~~~~----g-~~~~~r~~~~~~v~~~~~~ 238 (316)
.. +.. . +....-+...+....+.+++|++|+|-|+..... | -....|..|+++-+.++.+
T Consensus 326 ~~~~~~~~~~~p~~~~~~~gw~i~P~Gl~~~l~~~~~~Y~~Pi~ItENG~~~~d~~~~~g~i~D~~Ri~Yl~~hl~~~~~ 405 (474)
T PRK09852 326 SAANVVKSLRNPYLQVSDWGWGIDPLGLRITMNMMYDRYQKPLFLVENGLGAKDEIAANGEINDDYRISYLREHIRAMGE 405 (474)
T ss_pred CcCCceecccCCCcccCCCCCeeChHHHHHHHHHHHHhcCCCEEEeCCCCCCCCCcCCCCccCCHHHHHHHHHHHHHHHH
Confidence 00 000 0 0011112333333333488999999999874321 1 2356799999998888888
Q ss_pred HHHcCCceeeeeeeccccCCCCCCCCC-----ceEEeCC
Q 048104 239 LARNGGAIGGGMVWQLMAEGMQPYFDG-----YEIVLSQ 272 (316)
Q Consensus 239 ~~~~~~~~~G~~~W~~~~~g~~~~~dg-----~~i~~~~ 272 (316)
+...|-.+.|-+.|++.+. -.|..| |++++-+
T Consensus 406 Ai~dGv~V~GY~~WSl~Dn--~Ew~~G~y~~RfGLv~VD 442 (474)
T PRK09852 406 AIADGIPLMGYTTWGCIDL--VSASTGEMSKRYGFVYVD 442 (474)
T ss_pred HHHCCCCEEEEEeeccccc--ccccCCCccceeeeEEEC
Confidence 8888888999999999987 345445 5666543
No 23
>PF00232 Glyco_hydro_1: Glycosyl hydrolase family 1; InterPro: IPR001360 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 1 GH1 from CAZY comprises enzymes with a number of known activities; beta-glucosidase (3.2.1.21 from EC); beta-galactosidase (3.2.1.23 from EC); 6-phospho-beta-galactosidase (3.2.1.85 from EC); 6-phospho-beta-glucosidase (3.2.1.86 from EC); lactase-phlorizin hydrolase (3.2.1.62 from EC), (3.2.1.108 from EC); beta-mannosidase (3.2.1.25 from EC); myrosinase (3.2.1.147 from EC). ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1QVB_A 3AHY_D 2E9L_A 2ZOX_A 2JFE_X 2E9M_A 3FIZ_A 3FIY_A 3CMJ_A 3FJ0_A ....
Probab=98.65 E-value=1.1e-07 Score=94.40 Aligned_cols=229 Identities=20% Similarity=0.280 Sum_probs=136.3
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhcCCCCCCCCCCccCHHHHHHHHHHHHHHHhcccccccccccCC
Q 048104 3 DFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAGASVNSDDDFYTNAIVKGYYKNHVKKVLTRINTITRIAYKDD 82 (316)
Q Consensus 3 D~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~G~~~~~~~~fy~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd~ 82 (316)
|.+|+++.++||+.|++|+. |+ . +.|....|. |.+++..+.|.+|.+.+++| |+|.
T Consensus 102 ~~~i~~l~~~gi~P~vtL~H-~~----~---P~~l~~~gg--------w~~~~~~~~F~~Ya~~~~~~--------~gd~ 157 (455)
T PF00232_consen 102 RDLIDELLENGIEPIVTLYH-FD----L---PLWLEDYGG--------WLNRETVDWFARYAEFVFER--------FGDR 157 (455)
T ss_dssp HHHHHHHHHTT-EEEEEEES-S---------BHHHHHHTG--------GGSTHHHHHHHHHHHHHHHH--------HTTT
T ss_pred HHHHHHHHhhccceeeeeee-cc----c---ccceeeccc--------ccCHHHHHHHHHHHHHHHHH--------hCCC
Confidence 68999999999999999985 32 2 445443343 77899999999999999999 9986
Q ss_pred CcEEEEeecCCCCCCCC---------C---ChHH-------HHHHHHHHHHHHHhcCCCCeEEEcccCc--cCCCC--CC
Q 048104 83 PTIMAWELINEPRCQAD---------Y---SGKT-------LNNWVQEMASYVKSIDNKHLLEIGLEGF--YGDSI--PD 139 (316)
Q Consensus 83 PaI~aWeL~NEP~~~~~---------~---~~~~-------~~~w~~e~a~~Iks~Dp~hlVt~G~eG~--~~~~~--~~ 139 (316)
|--|-..|||.+... + +... +..=..++...+|++.|+-.|.+-.... +..+. ++
T Consensus 158 --V~~w~T~NEp~~~~~~~y~~g~~~p~~~~~~~~~~~~h~~l~AHa~A~~~~~~~~~~~~IGi~~~~~~~~P~~~~~~d 235 (455)
T PF00232_consen 158 --VKYWITFNEPNVFALLGYLYGGFPPGRDSLKAFYQAAHNLLLAHAKAVKAIKEKYPDGKIGIALNFSPFYPLSPSPED 235 (455)
T ss_dssp --BSEEEEEETHHHHHHHHHTSSSSTTCSSTHHHHHHHHHHHHHHHHHHHHHHHHHTCTSEEEEEEEEEEEEESSSSHHH
T ss_pred --cceEEeccccceeeccccccccccccccccchhhHHHhhHHHHHHHHHHHHhhcccceEEeccccccccCCCCccchh
Confidence 667999999985320 1 1111 1112355678888888988886643321 11110 00
Q ss_pred c-------------C-------CCCCCC------Cc--ccchhh---ccCCCCceEEEeecCCCCCCCCCC---------
Q 048104 140 K-------------K-------QFNPGY------QV--GTDFIS---NNMIKEIDFTTIHAYPDQWLPGKN--------- 179 (316)
Q Consensus 140 ~-------------~-------~~np~~------~~--g~d~~~---~~~~~~iD~~t~H~Yp~~w~~~~~--------- 179 (316)
. + +-.|.. .. -..|.. ......+||+.++.|.........
T Consensus 236 ~~~Aa~~~~~~~n~~f~dpi~~G~YP~~~~~~~~~~~~lp~ft~ed~~~ikg~~DFlGiNYYt~~~v~~~~~~~~~~~~~ 315 (455)
T PF00232_consen 236 DVAAAERADEFHNGWFLDPIFKGDYPEEMKEYLGERGILPEFTEEDKELIKGSIDFLGINYYTSRYVRADPNPSSPPSYD 315 (455)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHSSSEHHHHHHHGGGTSSTTSGHHHHHHHTTTTSEEEEEESEEEEEEESSSSTSSTTHE
T ss_pred hHHHHHHHHHHhhcccccCchhhcCChHHhhccccccccccccchhhhcccccchhhhhccccceeeccCcccccccccc
Confidence 0 0 001100 00 000000 011356999999999543210000
Q ss_pred ----------------------hHHHHHHHHHHHHHHHHHhhhcCC-CcEEEEcccCCcCCC----CCCHHHHHHHHHHH
Q 048104 180 ----------------------YYAQMQFVQKWLESHWTDSKTILK-KPLVFSEFGKSCKEA----GFSINVRDSFLNTI 232 (316)
Q Consensus 180 ----------------------~~~~~~~~~~~i~~~~~~a~~~~~-KPvvi~EfG~~~~~~----g~~~~~r~~~~~~v 232 (316)
.+..+..+-+|+. ++ ++ +|++|+|.|...... ......|..|+++-
T Consensus 316 ~~~~~~~~~~~~~~~t~~gw~i~P~Gl~~~L~~l~------~~-Y~~~pI~ITENG~~~~~~~~~~~v~D~~Ri~yl~~h 388 (455)
T PF00232_consen 316 SDAPFGQPYNPGGPTTDWGWEIYPEGLRDVLRYLK------DR-YGNPPIYITENGIGDPDEVDDGKVDDDYRIDYLQDH 388 (455)
T ss_dssp EEESEEEECETSSEBCTTSTBBETHHHHHHHHHHH------HH-HTSSEEEEEEE---EETTCTTSHBSHHHHHHHHHHH
T ss_pred CCccccccccccccccccCcccccchHhhhhhhhc------cc-cCCCcEEEecccccccccccccCcCcHHHHHHHHHH
Confidence 0122222333332 22 55 999999999976531 11357899999999
Q ss_pred HHHHHHHHHcCCceeeeeeeccccCCCCCCCCCc
Q 048104 233 YMNIYNLARNGGAIGGGMVWQLMAEGMQPYFDGY 266 (316)
Q Consensus 233 ~~~~~~~~~~~~~~~G~~~W~~~~~g~~~~~dg~ 266 (316)
+..+.++.+.|-++.|-+.|++.+. -.|.+||
T Consensus 389 l~~v~~Ai~dGv~V~GY~~WSl~Dn--~Ew~~Gy 420 (455)
T PF00232_consen 389 LNQVLKAIEDGVNVRGYFAWSLLDN--FEWAEGY 420 (455)
T ss_dssp HHHHHHHHHTT-EEEEEEEETSB-----BGGGGG
T ss_pred HHHHHhhhccCCCeeeEeeeccccc--cccccCc
Confidence 9999998888888999999999987 4565565
No 24
>PF11790 Glyco_hydro_cc: Glycosyl hydrolase catalytic core; InterPro: IPR024655 This entry represents the glycosyl hydrolase catalytic core of a group of uncharacterised proteins.
Probab=98.51 E-value=1.6e-06 Score=78.94 Aligned_cols=83 Identities=20% Similarity=0.220 Sum_probs=53.3
Q ss_pred hhhccC-CCCceEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhhcCCCcEEEEcccCCcCCCCCCHHHHHHHHHH
Q 048104 153 FISNNM-IKEIDFTTIHAYPDQWLPGKNYYAQMQFVQKWLESHWTDSKTILKKPLVFSEFGKSCKEAGFSINVRDSFLNT 231 (316)
Q Consensus 153 ~~~~~~-~~~iD~~t~H~Yp~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~KPvvi~EfG~~~~~~g~~~~~r~~~~~~ 231 (316)
|..... ...+||+++|.|... . .-+.++| +...+..+|||.|+|||........+.+++.+|+++
T Consensus 128 F~~~~~~~~~~D~iavH~Y~~~------~----~~~~~~i----~~~~~~~~kPIWITEf~~~~~~~~~~~~~~~~fl~~ 193 (239)
T PF11790_consen 128 FLSACARGCRVDFIAVHWYGGD------A----DDFKDYI----DDLHNRYGKPIWITEFGCWNGGSQGSDEQQASFLRQ 193 (239)
T ss_pred HHHhcccCCCccEEEEecCCcC------H----HHHHHHH----HHHHHHhCCCEEEEeecccCCCCCCCHHHHHHHHHH
Confidence 444443 458999999999322 1 1223333 333233889999999998764334577889999988
Q ss_pred HHHHHHHHHHcCCceeeeeeecc
Q 048104 232 IYMNIYNLARNGGAIGGGMVWQL 254 (316)
Q Consensus 232 v~~~~~~~~~~~~~~~G~~~W~~ 254 (316)
++..+- +.+ .+...+|--
T Consensus 194 ~~~~ld----~~~-~VeryawF~ 211 (239)
T PF11790_consen 194 ALPWLD----SQP-YVERYAWFG 211 (239)
T ss_pred HHHHHh----cCC-CeeEEEecc
Confidence 876442 233 566666655
No 25
>COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism]
Probab=98.49 E-value=6.1e-06 Score=75.89 Aligned_cols=204 Identities=15% Similarity=0.184 Sum_probs=121.9
Q ss_pred HHHHHHHCCCeEEEeCC--CCCCCCCCchhhhHHHHhcCCCCCCCCCCccCHHHHHHHHHHHHHHHhcccccccccccCC
Q 048104 5 VTSEARKYGIRLILSLS--NNYHDFGGRPQYVNWARAAGASVNSDDDFYTNAIVKGYYKNHVKKVLTRINTITRIAYKDD 82 (316)
Q Consensus 5 ~l~~A~k~gi~vil~L~--n~w~~~Gg~~~y~~w~~~~G~~~~~~~~fy~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd~ 82 (316)
+-..|++.||||+++|| ++|.+.+-+..--.|... +=...+++.-.+-+.+++. .+++
T Consensus 109 iakRAk~~GmKVl~dFHYSDfwaDPakQ~kPkaW~~l------------~fe~lk~avy~yTk~~l~~--------m~~e 168 (403)
T COG3867 109 IAKRAKNLGMKVLLDFHYSDFWADPAKQKKPKAWENL------------NFEQLKKAVYSYTKYVLTT--------MKKE 168 (403)
T ss_pred HHHHHHhcCcEEEeeccchhhccChhhcCCcHHhhhc------------CHHHHHHHHHHHHHHHHHH--------HHHc
Confidence 34567889999999998 678776543222234321 1235666666777777777 6665
Q ss_pred C-cEEEEeecCCCCCCCC-CCh-----HHHHHHHHHHHHHHHhcCCCCeEEEcccCccCCCCCCcCCCCCC-CCcccchh
Q 048104 83 P-TIMAWELINEPRCQAD-YSG-----KTLNNWVQEMASYVKSIDNKHLLEIGLEGFYGDSIPDKKQFNPG-YQVGTDFI 154 (316)
Q Consensus 83 P-aI~aWeL~NEP~~~~~-~~~-----~~~~~w~~e~a~~Iks~Dp~hlVt~G~eG~~~~~~~~~~~~np~-~~~g~d~~ 154 (316)
- .+=+-+++||-..... +++ +.+.+.+++-+++||.+||+.+|.+=.. ++ .|++ +. .-|.
T Consensus 169 Gi~pdmVQVGNEtn~gflwp~Ge~~~f~k~a~L~n~g~~avrev~p~ikv~lHla------~g----~~n~~y~--~~fd 236 (403)
T COG3867 169 GILPDMVQVGNETNGGFLWPDGEGRNFDKMAALLNAGIRAVREVSPTIKVALHLA------EG----ENNSLYR--WIFD 236 (403)
T ss_pred CCCccceEeccccCCceeccCCCCcChHHHHHHHHHHhhhhhhcCCCceEEEEec------CC----CCCchhh--HHHH
Confidence 4 3345799999875432 222 4566778899999999999999887431 00 1221 10 0111
Q ss_pred hcc-CCCCceEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhhcCCCcEEEEcccCC---cCC-------------
Q 048104 155 SNN-MIKEIDFTTIHAYPDQWLPGKNYYAQMQFVQKWLESHWTDSKTILKKPLVFSEFGKS---CKE------------- 217 (316)
Q Consensus 155 ~~~-~~~~iD~~t~H~Yp~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~KPvvi~EfG~~---~~~------------- 217 (316)
... .--..|++..-+||. |.- ++. -+..=+ -..|.+ ++|-|||.|-+.. .++
T Consensus 237 ~ltk~nvdfDVig~SyYpy-Whg--tl~----nL~~nl---~dia~r-Y~K~VmV~Etay~yTlEdgDg~~Nt~~~~~~t 305 (403)
T COG3867 237 ELTKRNVDFDVIGSSYYPY-WHG--TLN----NLTTNL---NDIASR-YHKDVMVVETAYTYTLEDGDGHENTFPSSEQT 305 (403)
T ss_pred HHHHcCCCceEEeeecccc-ccC--cHH----HHHhHH---HHHHHH-hcCeEEEEEecceeeeccCCCCCCcCCccccc
Confidence 111 122356778888997 432 221 111111 233454 9999999998872 111
Q ss_pred CCC--CHHHHHHHHHHHHHHHHHHHHcCCceeeeeeec
Q 048104 218 AGF--SINVRDSFLNTIYMNIYNLARNGGAIGGGMVWQ 253 (316)
Q Consensus 218 ~g~--~~~~r~~~~~~v~~~~~~~~~~~~~~~G~~~W~ 253 (316)
.++ +.+.|+.+.+++.+.+.+.- ++.+.|.++|.
T Consensus 306 ~~ypitVQGQat~vrDvie~V~nvp--~~~GlGvFYWE 341 (403)
T COG3867 306 GGYPITVQGQATFVRDVIEAVKNVP--KSNGLGVFYWE 341 (403)
T ss_pred CCCceEEechhhHHHHHHHHHHhCC--CCCceEEEEec
Confidence 122 34778899888887665432 22368999997
No 26
>PF01229 Glyco_hydro_39: Glycosyl hydrolases family 39; InterPro: IPR000514 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 39 GH39 from CAZY comprises enzymes with several known activities; alpha-L-iduronidase (3.2.1.76 from EC); beta-xylosidase (3.2.1.37 from EC). The most highly conserved regions in these enzymes are located in their N-terminal sections. These contain a glutamic acid residue which, on the basis of similarities with other families of glycosyl hydrolases [], probably acts as the proton donor in their catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 2BS9_D 2BFG_E 1W91_B 1UHV_D 1PX8_A.
Probab=98.42 E-value=2.6e-06 Score=85.28 Aligned_cols=233 Identities=16% Similarity=0.251 Sum_probs=107.8
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhcCCCCCCCCCCc-----cCHH----HHHHHHHHHHHHHhccc
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAGASVNSDDDFY-----TNAI----VKGYYKNHVKKVLTRIN 72 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~G~~~~~~~~fy-----~d~~----~~~~~~~~v~~vv~R~N 72 (316)
||.+++...++||+..+.|.- ++.-. ..+ ....|+ +-|+ -.+..++++++++.|
T Consensus 86 lD~i~D~l~~~g~~P~vel~f-------~p~~~----~~~----~~~~~~~~~~~~pp~~~~~W~~lv~~~~~h~~~R-- 148 (486)
T PF01229_consen 86 LDQILDFLLENGLKPFVELGF-------MPMAL----ASG----YQTVFWYKGNISPPKDYEKWRDLVRAFARHYIDR-- 148 (486)
T ss_dssp HHHHHHHHHHCT-EEEEEE-S-------B-GGG----BSS------EETTTTEE-S-BS-HHHHHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHcCCEEEEEEEe-------chhhh----cCC----CCccccccCCcCCcccHHHHHHHHHHHHHHHHhh--
Confidence 799999999999999998731 21100 001 001111 1222 333444555666666
Q ss_pred ccccccccCCC-cEEEEeecCCCCCCCC---CChHHHHHHHHHHHHHHHhcCCCCeEEEcccCccCCCCCCcCCCCCCCC
Q 048104 73 TITRIAYKDDP-TIMAWELINEPRCQAD---YSGKTLNNWVQEMASYVKSIDNKHLLEIGLEGFYGDSIPDKKQFNPGYQ 148 (316)
Q Consensus 73 ~~tg~~ykd~P-aI~aWeL~NEP~~~~~---~~~~~~~~w~~e~a~~Iks~Dp~hlVt~G~eG~~~~~~~~~~~~np~~~ 148 (316)
|+.+. .---||++|||+...- .+.+.+.+..+..+..||++||...| |..++- ....++ ..
T Consensus 149 ------YG~~ev~~W~fEiWNEPd~~~f~~~~~~~ey~~ly~~~~~~iK~~~p~~~v--GGp~~~-~~~~~~------~~ 213 (486)
T PF01229_consen 149 ------YGIEEVSTWYFEIWNEPDLKDFWWDGTPEEYFELYDATARAIKAVDPELKV--GGPAFA-WAYDEW------CE 213 (486)
T ss_dssp ------HHHHHHTTSEEEESS-TTSTTTSGGG-HHHHHHHHHHHHHHHHHH-TTSEE--EEEEEE-TT-THH------HH
T ss_pred ------cCCccccceeEEeCcCCCcccccCCCCHHHHHHHHHHHHHHHHHhCCCCcc--cCcccc-ccHHHH------HH
Confidence 65432 1135799999998532 12356888999999999999999876 332210 011110 01
Q ss_pred cccchhhccCCCCceEEEeecCCCCCCCC--CC----hHHHHHHHHHHHHHHHHHhh--hcCCCcEEEEcccCCcCCCCC
Q 048104 149 VGTDFISNNMIKEIDFTTIHAYPDQWLPG--KN----YYAQMQFVQKWLESHWTDSK--TILKKPLVFSEFGKSCKEAGF 220 (316)
Q Consensus 149 ~g~d~~~~~~~~~iD~~t~H~Yp~~w~~~--~~----~~~~~~~~~~~i~~~~~~a~--~~~~KPvvi~EfG~~~~~~g~ 220 (316)
...+|..... ..+||+|+|.||...... .. +........+ +........ ..-++|+.++||.........
T Consensus 214 ~~l~~~~~~~-~~~DfiS~H~y~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~~p~~~~~~tE~n~~~~~~~~ 291 (486)
T PF01229_consen 214 DFLEFCKGNN-CPLDFISFHSYGTDSAEDINENMYERIEDSRRLFPE-LKETRPIINDEADPNLPLYITEWNASISPRNP 291 (486)
T ss_dssp HHHHHHHHCT----SEEEEEEE-BESESE-SS-EEEEB--HHHHHHH-HHHHHHHHHTSSSTT--EEEEEEES-SSTT-G
T ss_pred HHHHHHhcCC-CCCCEEEEEecccccccccchhHHhhhhhHHHHHHH-HHHHHHHHhhccCCCCceeecccccccCCCcc
Confidence 1122333333 458999999999653211 00 1111111111 112111111 114579999999986643111
Q ss_pred --CHHHHHHHHHHHHHHHHHHHHcCCceeeeeeeccccC----CC--CCCCCCceEEeCCC
Q 048104 221 --SINVRDSFLNTIYMNIYNLARNGGAIGGGMVWQLMAE----GM--QPYFDGYEIVLSQN 273 (316)
Q Consensus 221 --~~~~r~~~~~~v~~~~~~~~~~~~~~~G~~~W~~~~~----g~--~~~~dg~~i~~~~~ 273 (316)
.+..+..|+- ..+++.. ++...+-.+|.+.+- ++ .....||++..-.+
T Consensus 292 ~~dt~~~aA~i~---k~lL~~~--~~~l~~~sywt~sD~Fee~~~~~~pf~ggfGLlt~~g 347 (486)
T PF01229_consen 292 QHDTCFKAAYIA---KNLLSND--GAFLDSFSYWTFSDRFEENGTPRKPFHGGFGLLTKLG 347 (486)
T ss_dssp GGGSHHHHHHHH---H-HHHHG--GGT-SEEEES-SBS---TTSS-SSSSSS-S-SEECCC
T ss_pred hhccccchhhHH---HHHHHhh--hhhhhhhhccchhhhhhccCCCCCceecchhhhhccC
Confidence 2234445432 2233332 112456678998752 22 23357887776554
No 27
>COG2723 BglB Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism]
Probab=98.40 E-value=4.3e-05 Score=74.88 Aligned_cols=228 Identities=21% Similarity=0.315 Sum_probs=134.6
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhc-CCCCCCCCCCccCHHHHHHHHHHHHHHHhcccccccccccC
Q 048104 3 DFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAA-GASVNSDDDFYTNAIVKGYYKNHVKKVLTRINTITRIAYKD 81 (316)
Q Consensus 3 D~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~-G~~~~~~~~fy~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd 81 (316)
|.|++++.++||..+++|+. |+. + .|.... |+ |.|.+..+.|.++.+.+.+| |+|
T Consensus 103 ~~l~del~~~gIep~vTL~H-fd~----P---~~L~~~ygG--------W~nR~~i~~F~~ya~~vf~~--------f~d 158 (460)
T COG2723 103 DRLFDELKARGIEPFVTLYH-FDL----P---LWLQKPYGG--------WENRETVDAFARYAATVFER--------FGD 158 (460)
T ss_pred HHHHHHHHHcCCEEEEEecc-cCC----c---HHHhhccCC--------ccCHHHHHHHHHHHHHHHHH--------hcC
Confidence 78999999999999999985 332 2 232222 22 77899999999999999999 998
Q ss_pred CCcEEEEeecCCCCCCCCC------------Ch-HHHHHHHH------HHHHHHHhcCCC-C-eEEEcccCccCCCC-CC
Q 048104 82 DPTIMAWELINEPRCQADY------------SG-KTLNNWVQ------EMASYVKSIDNK-H-LLEIGLEGFYGDSI-PD 139 (316)
Q Consensus 82 ~PaI~aWeL~NEP~~~~~~------------~~-~~~~~w~~------e~a~~Iks~Dp~-h-lVt~G~eG~~~~~~-~~ 139 (316)
- |--|-..|||.+.... .. ..+++-.. .....+|++.|+ . -++....-.|-.+. ++
T Consensus 159 k--Vk~W~TFNE~n~~~~~~y~~~~~~p~~~~~~~~~qa~hh~~lA~A~avk~~~~~~~~~kIG~~~~~~p~YP~s~~p~ 236 (460)
T COG2723 159 K--VKYWFTFNEPNVVVELGYLYGGHPPGIVDPKAAYQVAHHMLLAHALAVKAIKKINPKGKVGIILNLTPAYPLSDKPE 236 (460)
T ss_pred c--ceEEEEecchhhhhcccccccccCCCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcCceEEEeccCcCCCCCCCHH
Confidence 6 7789999999975321 11 12333332 234667788886 2 22223222232221 10
Q ss_pred --------------------cCCCCCCC------Ccc-------cchhhccCCCCceEEEeecCC-CCC-----------
Q 048104 140 --------------------KKQFNPGY------QVG-------TDFISNNMIKEIDFTTIHAYP-DQW----------- 174 (316)
Q Consensus 140 --------------------~~~~np~~------~~g-------~d~~~~~~~~~iD~~t~H~Yp-~~w----------- 174 (316)
..+..|.+ ..| .|. ..+....+||+++.+|- ...
T Consensus 237 dv~aA~~~~~~~n~~FlD~~~~G~yp~~~~~~~~~~~~~~~~~~~Dl-~~lk~~~~DfiG~NYY~~s~v~~~~~~~~~~~ 315 (460)
T COG2723 237 DVKAAENADRFHNRFFLDAQVKGEYPEYLEKELEENGILPEIEDGDL-EILKENTVDFIGLNYYTPSRVKAAEPRYVSGY 315 (460)
T ss_pred HHHHHHHHHHHhhhhhcchhhcCcCCHHHHHHHHhcCCCcccCcchH-HHHhcCCCCeEEEeeeeeeeEeeccCCcCCcc
Confidence 00111110 000 010 11223349999999997 211
Q ss_pred CCCCChH--------HH---HHHHHHHHHHHHHHhhhcCCCcEEEEcccCCcCCC----CCCHHHHHHHHHHHHHHHHHH
Q 048104 175 LPGKNYY--------AQ---MQFVQKWLESHWTDSKTILKKPLVFSEFGKSCKEA----GFSINVRDSFLNTIYMNIYNL 239 (316)
Q Consensus 175 ~~~~~~~--------~~---~~~~~~~i~~~~~~a~~~~~KPvvi~EfG~~~~~~----g~~~~~r~~~~~~v~~~~~~~ 239 (316)
.....+. .. -+...+=|...+......+++|++|+|=|+..... +-....|-+|++.-+..+.++
T Consensus 316 ~~~~~~~~~~~p~~~~sdwGWeI~P~GL~~~l~~~~~rY~~p~fItENG~G~~d~~~~~~i~DdyRI~Yl~~Hl~~v~~A 395 (460)
T COG2723 316 GPGGFFTSVPNPGLEVSDWGWEIYPKGLYDILEKLYERYGIPLFITENGLGVKDEVDFDGINDDYRIDYLKEHLKAVKKA 395 (460)
T ss_pred cccccccccCCCCCcccCCCceeChHHHHHHHHHHHHHhCCCeEEecCCCCcccccccCCcCchHHHHHHHHHHHHHHHH
Confidence 1000000 00 00001112222222332388999999999653321 124578999999988888888
Q ss_pred HHcCCceeeeeeeccccC
Q 048104 240 ARNGGAIGGGMVWQLMAE 257 (316)
Q Consensus 240 ~~~~~~~~G~~~W~~~~~ 257 (316)
...|-.+.|-+.|.+.+.
T Consensus 396 I~dGv~v~GY~~Ws~iD~ 413 (460)
T COG2723 396 IEDGVDVRGYFAWSLIDN 413 (460)
T ss_pred HHcCCCcccceecccccc
Confidence 888888999999999885
No 28
>PF13204 DUF4038: Protein of unknown function (DUF4038); PDB: 3KZS_D.
Probab=98.37 E-value=3.5e-06 Score=78.77 Aligned_cols=155 Identities=21% Similarity=0.246 Sum_probs=76.7
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCCCchhh--hHHHHhcCCCCCCCCCCccCHHHHHHHHHHHHHHHhcccccccccc
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHDFGGRPQY--VNWARAAGASVNSDDDFYTNAIVKGYYKNHVKKVLTRINTITRIAY 79 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y--~~w~~~~G~~~~~~~~fy~d~~~~~~~~~~v~~vv~R~N~~tg~~y 79 (316)
||++|+.|.++||.+-|.+. | |+. | -.|.. | ...++ .+..+.+++.|++| |
T Consensus 90 ~d~~i~~a~~~Gi~~~lv~~--w---g~~--~~~~~Wg~--~------~~~m~----~e~~~~Y~~yv~~R--------y 142 (289)
T PF13204_consen 90 LDRRIEKANELGIEAALVPF--W---GCP--YVPGTWGF--G------PNIMP----PENAERYGRYVVAR--------Y 142 (289)
T ss_dssp HHHHHHHHHHTT-EEEEESS------HHH--HH---------------TTSS-----HHHHHHHHHHHHHH--------H
T ss_pred HHHHHHHHHHCCCeEEEEEE--E---CCc--cccccccc--c------ccCCC----HHHHHHHHHHHHHH--------H
Confidence 79999999999999987663 3 111 2 12321 1 01122 34567789999999 9
Q ss_pred cCCCcEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCeEEEcccCccCCCCCCcCCCCCCCCcccchhhccCC
Q 048104 80 KDDPTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLLEIGLEGFYGDSIPDKKQFNPGYQVGTDFISNNMI 159 (316)
Q Consensus 80 kd~PaI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt~G~eG~~~~~~~~~~~~np~~~~g~d~~~~~~~ 159 (316)
+.-|.|+ |.|+||- ... ..-.+..++|+..||+.||.+|+|+=..|. .+. .++ ....
T Consensus 143 ~~~~Nvi-W~l~gd~-~~~----~~~~~~w~~~~~~i~~~dp~~L~T~H~~~~--~~~-------------~~~--~~~~ 199 (289)
T PF13204_consen 143 GAYPNVI-WILGGDY-FDT----EKTRADWDAMARGIKENDPYQLITIHPCGR--TSS-------------PDW--FHDE 199 (289)
T ss_dssp TT-SSEE-EEEESSS---T----TSSHHHHHHHHHHHHHH--SS-EEEEE-BT--EBT-------------HHH--HTT-
T ss_pred hcCCCCE-EEecCcc-CCC----CcCHHHHHHHHHHHHhhCCCCcEEEeCCCC--CCc-------------chh--hcCC
Confidence 9999887 9999998 221 223455679999999999999998732211 000 011 1234
Q ss_pred CCceEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhhcCCCcEEEEcccCCcC
Q 048104 160 KEIDFTTIHAYPDQWLPGKNYYAQMQFVQKWLESHWTDSKTILKKPLVFSEFGKSCK 216 (316)
Q Consensus 160 ~~iD~~t~H~Yp~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~KPvvi~EfG~~~~ 216 (316)
+-+||.++...-..-.. .. . ..+........+ ..||||..|-+....
T Consensus 200 ~Wldf~~~Qsgh~~~~~-~~----~----~~~~~~~~~~~~-p~KPvin~Ep~YEg~ 246 (289)
T PF13204_consen 200 PWLDFNMYQSGHNRYDQ-DN----W----YYLPEEFDYRRK-PVKPVINGEPCYEGI 246 (289)
T ss_dssp TT--SEEEB--S--TT---T----H----HHH--HHHHTSS-S---EEESS---BT-
T ss_pred CcceEEEeecCCCcccc-hH----H----HHHhhhhhhhhC-CCCCEEcCcccccCC
Confidence 66888776443211100 00 0 111111122333 789999999988664
No 29
>COG3934 Endo-beta-mannanase [Carbohydrate transport and metabolism]
Probab=98.25 E-value=8.7e-09 Score=99.49 Aligned_cols=278 Identities=19% Similarity=0.266 Sum_probs=177.1
Q ss_pred HHHHHHHHHHCCCeEE---EeCCCCCCCCCCchhhhHHHHhc-----CCCC-------CCCCCCccCHHHHHHHHHHHHH
Q 048104 2 LDFVTSEARKYGIRLI---LSLSNNYHDFGGRPQYVNWARAA-----GASV-------NSDDDFYTNAIVKGYYKNHVKK 66 (316)
Q Consensus 2 LD~~l~~A~k~gi~vi---l~L~n~w~~~Gg~~~y~~w~~~~-----G~~~-------~~~~~fy~d~~~~~~~~~~v~~ 66 (316)
+|-.|+....++..++ ..-.+.|.+.|+|..|+.|.... |.+. +....|+.|-..-..|+.+...
T Consensus 135 ~~ptI~gw~l~Ne~lv~~p~s~N~f~~w~~emy~yiK~ldd~hlvsvGD~~sp~~~~~pyN~r~~vDya~~hLY~hyd~s 214 (587)
T COG3934 135 LDPTIAGWALRNEPLVEAPISVNNFWDWSGEMYAYIKWLDDGHLVSVGDPASPWPQYAPYNARFYVDYAANHLYRHYDTS 214 (587)
T ss_pred cChHHHHHHhcCCccccccCChhHHHHHHHHHHHHhhccCCCCeeecCCcCCcccccCCcccceeeccccchhhhhccCC
Confidence 3445555555666333 33445788889999999887431 2211 1234556677777888888888
Q ss_pred HHhcccccccccccCCCcEEEEeecCCCCCCCCC-----ChHHHHHHHHH------HHHHHHhcCCCCeEEEcccCccCC
Q 048104 67 VLTRINTITRIAYKDDPTIMAWELINEPRCQADY-----SGKTLNNWVQE------MASYVKSIDNKHLLEIGLEGFYGD 135 (316)
Q Consensus 67 vv~R~N~~tg~~ykd~PaI~aWeL~NEP~~~~~~-----~~~~~~~w~~e------~a~~Iks~Dp~hlVt~G~eG~~~~ 135 (316)
.+.|+.+.+|.+|.+.|++++|.+.|+++..... .-+....|+.- +.+.|..++--|+++.++++-|++
T Consensus 215 l~~r~s~~yg~~~l~i~~~~g~~pV~leefGfsta~g~e~s~ayfiw~~lal~~ggdGaLiwclsdf~~gsdd~ey~w~p 294 (587)
T COG3934 215 LVSRVSTVYGKPYLDIPTIMGWQPVNLEEFGFSTAFGQENSPAYFIWIRLALDTGGDGALIWCLSDFHLGSDDSEYTWGP 294 (587)
T ss_pred hhheeeeeecchhhccchhcccceeeccccCCcccccccccchhhhhhhhHHhhcCCceEEEEecCCccCCCCCCCcccc
Confidence 8999999999999999999999999999875422 12356667665 223666677777777777665544
Q ss_pred CCCCcCCCCCCCCcccchhhccCCCCceEEEeecCCCCCCCC--CCh-----HHHHHHHHHHHHHHHHHhhhcCCCcEEE
Q 048104 136 SIPDKKQFNPGYQVGTDFISNNMIKEIDFTTIHAYPDQWLPG--KNY-----YAQMQFVQKWLESHWTDSKTILKKPLVF 208 (316)
Q Consensus 136 ~~~~~~~~np~~~~g~d~~~~~~~~~iD~~t~H~Yp~~w~~~--~~~-----~~~~~~~~~~i~~~~~~a~~~~~KPvvi 208 (316)
... +.-.++....+.+|+-++|.++..|..- +++ +...-.-..++++|+..+++ +.||+.+
T Consensus 295 ~el-----------~fgiIradgpek~~a~~~~~fsn~~kdI~~~Sfq~p~~e~~eikp~~~va~~~fv~e~-~~~~Lf~ 362 (587)
T COG3934 295 MEL-----------EFGIIRADGPEKIDAMTLHIFSNNWKDISMCSFQPPTYEAGEIKPRDYVAQHIFVAER-LNKPLFI 362 (587)
T ss_pred ccc-----------eeeeecCCCchhhhHHHHHHhccccceeeeecccCcccccceecchHhhhhceecHhh-hccchhh
Confidence 321 1123455566778888888888877421 111 22211234456788888887 9999999
Q ss_pred EcccCCcCC----CCCCHHHHHHHHHHHHHHHHHHHHcCCceeeeeeeccccCCC-----CCC-CCCceEEe--------
Q 048104 209 SEFGKSCKE----AGFSINVRDSFLNTIYMNIYNLARNGGAIGGGMVWQLMAEGM-----QPY-FDGYEIVL-------- 270 (316)
Q Consensus 209 ~EfG~~~~~----~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~G~~~W~~~~~g~-----~~~-~dg~~i~~-------- 270 (316)
.+|+..... +|.++..|+..++++++--.-...-+++.+|..+|.+...+. ..| ..+++++-
T Consensus 363 rv~nl~f~~~~~~~gqpt~~rd~d~~~~l~d~kllmipsgpt~g~Ttw~~llk~vvn~v~~v~Fs~p~ts~h~s~th~wq 442 (587)
T COG3934 363 RVFNLIFDGRQFTPGQPTTYRDRDYKTMLDDAKLLMIPSGPTAGVTTWAWLLKGVVNQVPDVWFSKPDTSYHGSPTHEWQ 442 (587)
T ss_pred hcchhHhhhhhhcCCCceEEeccchhhcCCchhheeecCCcccchhHHHHHhhhhhccccceeecCCceeecCCCchhhH
Confidence 999976553 455677788888775542222223356789999999864432 112 11233332
Q ss_pred ------CCCccHHHHHHHHHHHHHhcc
Q 048104 271 ------SQNPSTRSVIAQQSNKMTALA 291 (316)
Q Consensus 271 ------~~~~~~~~~i~~~~~~~~~~~ 291 (316)
+-+++....|..++.+++.|.
T Consensus 443 ~lFGv~di~~~gs~g~~a~~~nVkllg 469 (587)
T COG3934 443 GLFGVFDIDASGSAGIKAHAANVKLLG 469 (587)
T ss_pred HhhCCCCCccccccccccchhhhcccc
Confidence 223445455678888877774
No 30
>PF03198 Glyco_hydro_72: Glucanosyltransferase; InterPro: IPR004886 This family is a group of yeast glycolipid proteins anchored to the membrane. It includes Candida albicans (Yeast) pH-regulated protein, which is required for apical growth and plays a role in morphogenesis and Saccharomyces cerevisiae glycolipid anchored surface protein.; PDB: 2W61_A 2W62_A 2W63_A.
Probab=98.13 E-value=9.9e-05 Score=68.92 Aligned_cols=205 Identities=17% Similarity=0.275 Sum_probs=94.8
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhcCCCCCCCCCCccCHHHHHHHHHHHHHHHhcccccccccccCC
Q 048104 3 DFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAGASVNSDDDFYTNAIVKGYYKNHVKKVLTRINTITRIAYKDD 82 (316)
Q Consensus 3 D~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~G~~~~~~~~fy~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd~ 82 (316)
|.++......||+||++|... .+.... ..+.. ..-..+.++...++.- ++.-
T Consensus 82 d~CM~~~~~aGIYvi~Dl~~p---~~sI~r------------~~P~~-----sw~~~l~~~~~~vid~--------fa~Y 133 (314)
T PF03198_consen 82 DECMSAFADAGIYVILDLNTP---NGSINR------------SDPAP-----SWNTDLLDRYFAVIDA--------FAKY 133 (314)
T ss_dssp HHHHHHHHHTT-EEEEES-BT---TBS--T------------TS-----------HHHHHHHHHHHHH--------HTT-
T ss_pred HHHHHHHHhCCCEEEEecCCC---CccccC------------CCCcC-----CCCHHHHHHHHHHHHH--------hccC
Confidence 678889999999999999762 111110 01111 2333455556667776 8888
Q ss_pred CcEEEEeecCCCCCCCCC--ChHHHHHHHHHHHHHHHhcCCCCeEEEcccCccCCCCCCcCCCCCCCCcccch-hhccCC
Q 048104 83 PTIMAWELINEPRCQADY--SGKTLNNWVQEMASYVKSIDNKHLLEIGLEGFYGDSIPDKKQFNPGYQVGTDF-ISNNMI 159 (316)
Q Consensus 83 PaI~aWeL~NEP~~~~~~--~~~~~~~w~~e~a~~Iks~Dp~hlVt~G~eG~~~~~~~~~~~~np~~~~g~d~-~~~~~~ 159 (316)
|.++|+-.+||-...... ..+-+++-++.|-++||+..... |-+|.. ..+..+. .+. -.++ .=....
T Consensus 134 ~N~LgFf~GNEVin~~~~t~aap~vKAavRD~K~Yi~~~~~R~-IPVGYs---aaD~~~~---r~~---~a~Yl~Cg~~~ 203 (314)
T PF03198_consen 134 DNTLGFFAGNEVINDASNTNAAPYVKAAVRDMKAYIKSKGYRS-IPVGYS---AADDAEI---RQD---LANYLNCGDDD 203 (314)
T ss_dssp TTEEEEEEEESSS-STT-GGGHHHHHHHHHHHHHHHHHSSS-----EEEE---E---TTT---HHH---HHHHTTBTT--
T ss_pred CceEEEEecceeecCCCCcccHHHHHHHHHHHHHHHHhcCCCC-CceeEE---ccCChhH---HHH---HHHHhcCCCcc
Confidence 999999999997654321 23557889999999999976533 444421 1111100 000 0000 000112
Q ss_pred CCceEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhhcCCCcEEEEcccCCcCCC-CCCHHHHHHHHHHHHHHHHH
Q 048104 160 KEIDFTTIHAYPDQWLPGKNYYAQMQFVQKWLESHWTDSKTILKKPLVFSEFGKSCKEA-GFSINVRDSFLNTIYMNIYN 238 (316)
Q Consensus 160 ~~iD~~t~H~Yp~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~KPvvi~EfG~~~~~~-g~~~~~r~~~~~~v~~~~~~ 238 (316)
..+||+.++.|. |-...+++. ..| .......+. +..|+++.|||.....+ -+++ ....|..
T Consensus 204 ~~iDf~g~N~Y~--WCg~Stf~~-----SGy-~~l~~~f~~-y~vPvffSEyGCn~~~pR~f~e--v~aly~~------- 265 (314)
T PF03198_consen 204 ERIDFFGLNSYE--WCGDSTFET-----SGY-DRLTKEFSN-YSVPVFFSEYGCNTVTPRTFTE--VPALYSP------- 265 (314)
T ss_dssp ---S-EEEEE------SS--HHH-----HSH-HHHHHHHTT--SS-EEEEEE---SSSS---TH--HHHHTSH-------
T ss_pred cccceeeeccce--ecCCCcccc-----ccH-HHHHHHhhC-CCCCeEEcccCCCCCCCccchH--hHHhhCc-------
Confidence 479999999995 644344432 112 223344555 89999999999876532 1211 1111111
Q ss_pred HHHcCCceeeeeeeccccCCCCCCCCCceEEe
Q 048104 239 LARNGGAIGGGMVWQLMAEGMQPYFDGYEIVL 270 (316)
Q Consensus 239 ~~~~~~~~~G~~~W~~~~~g~~~~~dg~~i~~ 270 (316)
.. .+ -..|.++-.|..+. .+|++|-
T Consensus 266 ~M-t~-v~SGGivYEy~~e~-----n~yGlV~ 290 (314)
T PF03198_consen 266 EM-TD-VWSGGIVYEYFQEA-----NNYGLVE 290 (314)
T ss_dssp HH-HT-TEEEEEES-SB--S-----SS--SEE
T ss_pred cc-hh-heeceEEEEEeccC-----CceEEEE
Confidence 11 11 37899999888773 3465553
No 31
>COG3693 XynA Beta-1,4-xylanase [Carbohydrate transport and metabolism]
Probab=97.92 E-value=0.00046 Score=64.48 Aligned_cols=101 Identities=23% Similarity=0.389 Sum_probs=69.8
Q ss_pred HHHHHHHHHHCCCeEEEeCCC-CCCCCCCchhhhHHHHhcCCCCCCCCCCccCHHHHHHHHHHHHHHHhccccccccccc
Q 048104 2 LDFVTSEARKYGIRLILSLSN-NYHDFGGRPQYVNWARAAGASVNSDDDFYTNAIVKGYYKNHVKKVLTRINTITRIAYK 80 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n-~w~~~Gg~~~y~~w~~~~G~~~~~~~~fy~d~~~~~~~~~~v~~vv~R~N~~tg~~yk 80 (316)
=|.+++-|++|||.+-- |+ -|+. |.++|... .+ .+-+.+...+.+||++|+.| ||
T Consensus 84 AD~ia~FAr~h~m~lhG--HtLvW~~-----q~P~W~~~-------~e--~~~~~~~~~~e~hI~tV~~r--------Yk 139 (345)
T COG3693 84 ADAIANFARKHNMPLHG--HTLVWHS-----QVPDWLFG-------DE--LSKEALAKMVEEHIKTVVGR--------YK 139 (345)
T ss_pred hHHHHHHHHHcCCeecc--ceeeecc-----cCCchhhc-------cc--cChHHHHHHHHHHHHHHHHh--------cc
Confidence 38889999999997643 21 1321 34556521 01 34478889999999999999 99
Q ss_pred CCCcEEEEeecCCCCCCCCC-------ChHHHHHHHHHHHHHHHhcCCCCeEEEc
Q 048104 81 DDPTIMAWELINEPRCQADY-------SGKTLNNWVQEMASYVKSIDNKHLLEIG 128 (316)
Q Consensus 81 d~PaI~aWeL~NEP~~~~~~-------~~~~~~~w~~e~a~~Iks~Dp~hlVt~G 128 (316)
+. +.+||+.|||...... .+-.-..|++.....-|+.||+.-..+-
T Consensus 140 g~--~~sWDVVNE~vdd~g~~R~s~w~~~~~gpd~I~~aF~~AreadP~AkL~~N 192 (345)
T COG3693 140 GS--VASWDVVNEAVDDQGSLRRSAWYDGGTGPDYIKLAFHIAREADPDAKLVIN 192 (345)
T ss_pred Cc--eeEEEecccccCCCchhhhhhhhccCCccHHHHHHHHHHHhhCCCceEEee
Confidence 98 8899999999763221 0012235777778888999998766554
No 32
>COG5309 Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism]
Probab=97.75 E-value=0.0018 Score=59.05 Aligned_cols=135 Identities=18% Similarity=0.166 Sum_probs=86.6
Q ss_pred ccCCCcEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCeEEEcccCccCCCCCCcCCCCCCCCcccchhhccC
Q 048104 79 YKDDPTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLLEIGLEGFYGDSIPDKKQFNPGYQVGTDFISNNM 158 (316)
Q Consensus 79 ykd~PaI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt~G~eG~~~~~~~~~~~~np~~~~g~d~~~~~~ 158 (316)
|...|.|-+.-++||.-...+.+...+.+.+...-..+|+.+-.-+|++.. -| +. +..||. .
T Consensus 128 ~~~~d~v~~v~VGnEal~r~~~tasql~~~I~~vrsav~~agy~gpV~T~d-sw-~~-----~~~np~-----------l 189 (305)
T COG5309 128 YNGWDDVTTVTVGNEALNRNDLTASQLIEYIDDVRSAVKEAGYDGPVTTVD-SW-NV-----VINNPE-----------L 189 (305)
T ss_pred cCCCCceEEEEechhhhhcCCCCHHHHHHHHHHHHHHHHhcCCCCceeecc-cc-ee-----eeCChH-----------H
Confidence 777889999999999877666667889999999999999888888887643 22 11 111441 2
Q ss_pred CCCceEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhhcCCCcEEEEcccCCcCCCCC-----CHHHHHHHHHHHH
Q 048104 159 IKEIDFTTIHAYPDQWLPGKNYYAQMQFVQKWLESHWTDSKTILKKPLVFSEFGKSCKEAGF-----SINVRDSFLNTIY 233 (316)
Q Consensus 159 ~~~iD~~t~H~Yp~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~KPvvi~EfG~~~~~~g~-----~~~~r~~~~~~v~ 233 (316)
+...||+..|..|. |.....-+..-.|+..-++ .++-+.. -+|||+|+|-|++.++..+ +...+..+++.+.
T Consensus 190 ~~~SDfia~N~~aY-wd~~~~a~~~~~f~~~q~e-~vqsa~g-~~k~~~v~EtGWPS~G~~~G~a~pS~anq~~~~~~i~ 266 (305)
T COG5309 190 CQASDFIAANAHAY-WDGQTVANAAGTFLLEQLE-RVQSACG-TKKTVWVTETGWPSDGRTYGSAVPSVANQKIAVQEIL 266 (305)
T ss_pred hhhhhhhhcccchh-ccccchhhhhhHHHHHHHH-HHHHhcC-CCccEEEeeccCCCCCCccCCcCCChhHHHHHHHHHH
Confidence 45568877766654 4322111111123322222 2333332 3499999999999876433 5677888877766
Q ss_pred H
Q 048104 234 M 234 (316)
Q Consensus 234 ~ 234 (316)
.
T Consensus 267 ~ 267 (305)
T COG5309 267 N 267 (305)
T ss_pred h
Confidence 4
No 33
>COG3250 LacZ Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism]
Probab=97.60 E-value=0.00027 Score=74.41 Aligned_cols=63 Identities=17% Similarity=0.326 Sum_probs=54.7
Q ss_pred cCHHHHHHHHHHHHHHHhcccccccccccCCCcEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCeEEEcccC
Q 048104 52 TNAIVKGYYKNHVKKVLTRINTITRIAYKDDPTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLLEIGLEG 131 (316)
Q Consensus 52 ~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd~PaI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt~G~eG 131 (316)
.+++.++.....++.+|+| -|+||+|+.|.++||+.-... +..+...+|++||..+|+.+..+
T Consensus 373 ~~~~~~k~~~~~i~~mver--------~knHPSIiiWs~gNE~~~g~~---------~~~~~~~~k~~d~~r~~~~~~~~ 435 (808)
T COG3250 373 DDPEWRKEVSEEVRRMVER--------DRNHPSIIIWSLGNESGHGSN---------HWALYRWFKASDPTRPVQYEGRG 435 (808)
T ss_pred CCcchhHHHHHHHHHHHHh--------ccCCCcEEEEeccccccCccc---------cHHHHHHHhhcCCccceeccCcc
Confidence 7888999999999999999 999999999999999876432 34677788999999999998766
No 34
>PF14488 DUF4434: Domain of unknown function (DUF4434)
Probab=97.43 E-value=0.0013 Score=56.50 Aligned_cols=94 Identities=17% Similarity=0.263 Sum_probs=69.5
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhcCCCCCCCCCCccCHH-HHHHHHHHHHHHHhccccccccccc
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAGASVNSDDDFYTNAI-VKGYYKNHVKKVLTRINTITRIAYK 80 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~G~~~~~~~~fy~d~~-~~~~~~~~v~~vv~R~N~~tg~~yk 80 (316)
|+.+|++|+++||+|.+.|-.+ ..|... +|++ ..+.-+..+..+.++ |+
T Consensus 67 l~~~L~~A~~~Gmkv~~Gl~~~----------~~~w~~------------~~~~~~~~~~~~v~~el~~~--------yg 116 (166)
T PF14488_consen 67 LEMILDAADKYGMKVFVGLYFD----------PDYWDQ------------GDLDWEAERNKQVADELWQR--------YG 116 (166)
T ss_pred HHHHHHHHHHcCCEEEEeCCCC----------chhhhc------------cCHHHHHHHHHHHHHHHHHH--------Hc
Confidence 6889999999999999998531 011110 1221 223334578888888 99
Q ss_pred CCCcEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCeEEEcc
Q 048104 81 DDPTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLLEIGL 129 (316)
Q Consensus 81 d~PaI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt~G~ 129 (316)
+||+.-||=|-.|+..... ...+.++.+..++|.+.|+.+|.+..
T Consensus 117 ~h~sf~GWYip~E~~~~~~----~~~~~~~~l~~~lk~~s~~~Pv~ISp 161 (166)
T PF14488_consen 117 HHPSFYGWYIPYEIDDYNW----NAPERFALLGKYLKQISPGKPVMISP 161 (166)
T ss_pred CCCCCceEEEecccCCccc----chHHHHHHHHHHHHHhCCCCCeEEec
Confidence 9999999999999986542 23566789999999999999998853
No 35
>KOG0626 consensus Beta-glucosidase, lactase phlorizinhydrolase, and related proteins [Carbohydrate transport and metabolism]
Probab=97.20 E-value=0.019 Score=57.30 Aligned_cols=67 Identities=19% Similarity=0.349 Sum_probs=53.4
Q ss_pred HHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHh-cCCCCCCCCCCccCHHHHHHHHHHHHHHHhcccccccccccCC
Q 048104 4 FVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARA-AGASVNSDDDFYTNAIVKGYYKNHVKKVLTRINTITRIAYKDD 82 (316)
Q Consensus 4 ~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~-~G~~~~~~~~fy~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd~ 82 (316)
.+|++..++||..+++|. +|+. +| +... -|. |-++++++.|+++..-..++ |+|.
T Consensus 137 ~LI~eL~~nGI~P~VTLf-HwDl----Pq---~LeDeYgG--------wLn~~ivedF~~yA~~CF~~--------fGDr 192 (524)
T KOG0626|consen 137 NLIDELLANGIEPFVTLF-HWDL----PQ---ALEDEYGG--------WLNPEIVEDFRDYADLCFQE--------FGDR 192 (524)
T ss_pred HHHHHHHHcCCeEEEEEe-cCCC----CH---HHHHHhcc--------ccCHHHHHHHHHHHHHHHHH--------hccc
Confidence 589999999999999998 4542 22 2222 121 66899999999999999999 9997
Q ss_pred CcEEEEeecCCCCC
Q 048104 83 PTIMAWELINEPRC 96 (316)
Q Consensus 83 PaI~aWeL~NEP~~ 96 (316)
|-.|-..|||..
T Consensus 193 --VK~WiT~NEP~v 204 (524)
T KOG0626|consen 193 --VKHWITFNEPNV 204 (524)
T ss_pred --ceeeEEecccce
Confidence 889999999983
No 36
>PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 35 GH35 from CAZY comprises enzymes with only one known activity; beta-galactosidase (3.2.1.23 from EC). Mammalian beta-galactosidase is a lysosomal enzyme (gene GLB1) which cleaves the terminal galactose from gangliosides, glycoproteins, and glycosaminoglycans and whose deficiency is the cause of the genetic disease Gm(1) gangliosidosis (Morquio disease type B).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3OGS_A 3OGV_A 3OGR_A 3OG2_A 1TG7_A 1XC6_A 3THC_C 3THD_D 3D3A_A 4E8D_B ....
Probab=96.94 E-value=0.015 Score=55.14 Aligned_cols=111 Identities=15% Similarity=0.214 Sum_probs=62.4
Q ss_pred HHHHHHHHHHCCCeEEEeCC---CCCCCCCCchhhhHHHHhc-CCCCCCCCCCccCHHHHHHHHHHHHHHHhcccccccc
Q 048104 2 LDFVTSEARKYGIRLILSLS---NNYHDFGGRPQYVNWARAA-GASVNSDDDFYTNAIVKGYYKNHVKKVLTRINTITRI 77 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~---n~w~~~Gg~~~y~~w~~~~-G~~~~~~~~fy~d~~~~~~~~~~v~~vv~R~N~~tg~ 77 (316)
|+.+|+.|+++||+|||-.- +.--.+||.+ .|.... +..+. -+|+...+..+++++.|+..+-+ .
T Consensus 65 l~~f~~~a~~~gl~vilrpGpyi~aE~~~gG~P---~Wl~~~~~~~~R-----~~~~~~~~~~~~~~~~~~~~~~~---~ 133 (319)
T PF01301_consen 65 LDRFLDLAQENGLYVILRPGPYICAEWDNGGLP---AWLLRKPDIRLR-----TNDPPFLEAVERWYRALAKIIKP---L 133 (319)
T ss_dssp HHHHHHHHHHTT-EEEEEEES---TTBGGGG-----GGGGGSTTS-SS-----SS-HHHHHHHHHHHHHHHHHHGG---G
T ss_pred HHHHHHHHHHcCcEEEecccceecccccchhhh---hhhhcccccccc-----ccchhHHHHHHHHHHHHHHHHHh---h
Confidence 78999999999999998753 2211347764 454331 11111 24677777777777777766433 2
Q ss_pred cccCCCcEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCC--CCeEEEc
Q 048104 78 AYKDDPTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDN--KHLLEIG 128 (316)
Q Consensus 78 ~ykd~PaI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp--~hlVt~G 128 (316)
-+++.-.|++.+|-||..... +.. +..+.+.+..++.-+ --+.+++
T Consensus 134 ~~~~GGpII~vQvENEyg~~~--~~~---~Y~~~l~~~~~~~g~~~~~~~t~d 181 (319)
T PF01301_consen 134 QYTNGGPIIMVQVENEYGSYG--TDR---AYMEALKDAYRDWGIDPVLLYTTD 181 (319)
T ss_dssp BGGGTSSEEEEEESSSGGCTS--S-H---HHHHHHHHHHHHTT-SSSBEEEEE
T ss_pred hhcCCCceehhhhhhhhCCCc--ccH---hHHHHHHHHHHHhhCccceeeccC
Confidence 355656799999999988332 122 334444444444333 3444443
No 37
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function.
Probab=96.80 E-value=0.024 Score=53.58 Aligned_cols=161 Identities=19% Similarity=0.298 Sum_probs=93.6
Q ss_pred HHHHHHHHHHCCCeEEEeCC-C-CCCCCCC-chhhhHHHH--hcCCCCC----CCCC-Cc--cCHHHHHHHHHHHHHHHh
Q 048104 2 LDFVTSEARKYGIRLILSLS-N-NYHDFGG-RPQYVNWAR--AAGASVN----SDDD-FY--TNAIVKGYYKNHVKKVLT 69 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~-n-~w~~~Gg-~~~y~~w~~--~~G~~~~----~~~~-fy--~d~~~~~~~~~~v~~vv~ 69 (316)
|.++|++|+|+||.|.--|. . .....+. ....+.|.. ..|.... .... |+ .+|++++...+.++.||+
T Consensus 72 L~~~I~eaHkrGlevHAW~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lnP~~PeVr~~i~~~v~Eiv~ 151 (311)
T PF02638_consen 72 LEFMIEEAHKRGLEVHAWFRVGFNAPDVSHILKKHPEWFAVNHPGWVRTYEDANGGYYWLNPGHPEVRDYIIDIVKEIVK 151 (311)
T ss_pred HHHHHHHHHHcCCEEEEEEEeecCCCchhhhhhcCchhheecCCCceeecccCCCCceEECCCCHHHHHHHHHHHHHHHh
Confidence 77899999999999986551 0 0001010 012233421 1111111 1222 32 477999999999999999
Q ss_pred cccccccccccC---CCcEEEEeec--------C--CCCC-CCC-----CChHHHHHHHHHHHHHHHhcCCCCeEEEccc
Q 048104 70 RINTITRIAYKD---DPTIMAWELI--------N--EPRC-QAD-----YSGKTLNNWVQEMASYVKSIDNKHLLEIGLE 130 (316)
Q Consensus 70 R~N~~tg~~ykd---~PaI~aWeL~--------N--EP~~-~~~-----~~~~~~~~w~~e~a~~Iks~Dp~hlVt~G~e 130 (316)
+-. +.|+.+-+ .|...+++.. . .|.. ..+ ...+.+..+++++...||+++|+-.+++.-.
T Consensus 152 ~Yd-vDGIhlDdy~yp~~~~g~~~~~~~~y~~~~g~~~~~~~~d~~W~~WRr~~I~~~V~~i~~~ik~~kP~v~~sisp~ 230 (311)
T PF02638_consen 152 NYD-VDGIHLDDYFYPPPSFGYDFPDVAAYEKYTGKDPFSSPEDDAWTQWRRDNINNFVKRIYDAIKAIKPWVKFSISPF 230 (311)
T ss_pred cCC-CCeEEecccccccccCCCCCccHHHHHHhcCcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEee
Confidence 954 55663322 2322222210 0 1111 011 1235677789999999999999999998776
Q ss_pred CccCCCCCCcCCCCCCCCcccchhhccCCCCceEEEeecCCC
Q 048104 131 GFYGDSIPDKKQFNPGYQVGTDFISNNMIKEIDFTTIHAYPD 172 (316)
Q Consensus 131 G~~~~~~~~~~~~np~~~~g~d~~~~~~~~~iD~~t~H~Yp~ 172 (316)
|.++.+.. ..-+|+...+...-||++..-.|-.
T Consensus 231 g~~~~~y~---------~~~qD~~~W~~~G~iD~i~Pq~Y~~ 263 (311)
T PF02638_consen 231 GIWNSAYD---------DYYQDWRNWLKEGYIDYIVPQIYWS 263 (311)
T ss_pred cchhhhhh---------heeccHHHHHhcCCccEEEeeeccc
Confidence 66632211 1224555556668899999999944
No 38
>PF14587 Glyco_hydr_30_2: O-Glycosyl hydrolase family 30; PDB: 3CLW_B.
Probab=96.80 E-value=0.29 Score=47.39 Aligned_cols=228 Identities=15% Similarity=0.180 Sum_probs=98.1
Q ss_pred HHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhcCCCCC--CCCCCccCHHHHHHHHHHHHHHHhcccccccccccC
Q 048104 4 FVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAGASVN--SDDDFYTNAIVKGYYKNHVKKVLTRINTITRIAYKD 81 (316)
Q Consensus 4 ~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~G~~~~--~~~~fy~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd 81 (316)
++|.+|++||+..++.|.|. .. -|...+|.... ....- -.+...+.|.+|+..|+.+ |++
T Consensus 108 wfL~~Ak~rGV~~f~aFSNS--PP-------~~MT~NG~~~g~~~~~~N-Lk~d~y~~FA~YLa~Vv~~--------~~~ 169 (384)
T PF14587_consen 108 WFLKAAKERGVNIFEAFSNS--PP-------WWMTKNGSASGGDDGSDN-LKPDNYDAFADYLADVVKH--------YKK 169 (384)
T ss_dssp HHHHHHHHTT---EEEE-SS--S--------GGGSSSSSSB-S-SSS-S-S-TT-HHHHHHHHHHHHHH--------HHC
T ss_pred HHHHHHHHcCCCeEEEeecC--CC-------HHHhcCCCCCCCCccccc-cChhHHHHHHHHHHHHHHH--------HHh
Confidence 57899999999999988772 11 11122222110 01111 1345678899999999999 644
Q ss_pred CC-cEEEEeecCCCCCCC-------C-CChHHHHHHHHHHHHHHHhcCCCCeEEEcccCc----cCCCCCCcC-------
Q 048104 82 DP-TIMAWELINEPRCQA-------D-YSGKTLNNWVQEMASYVKSIDNKHLLEIGLEGF----YGDSIPDKK------- 141 (316)
Q Consensus 82 ~P-aI~aWeL~NEP~~~~-------~-~~~~~~~~w~~e~a~~Iks~Dp~hlVt~G~eG~----~~~~~~~~~------- 141 (316)
+- .|-.-+-+|||...- + .+.+...+.++.+.+.+++...+.-|+++.++- |.......-
T Consensus 170 ~GI~f~~IsP~NEP~~~W~~~~QEG~~~~~~e~a~vI~~L~~~L~~~GL~t~I~~~Ea~~~~~l~~~~~~~~~r~~~i~~ 249 (384)
T PF14587_consen 170 WGINFDYISPFNEPQWNWAGGSQEGCHFTNEEQADVIRALDKALKKRGLSTKISACEAGDWEYLYKTDKNDWGRGNQIEA 249 (384)
T ss_dssp TT--EEEEE--S-TTS-GG--SS-B----HHHHHHHHHHHHHHHHHHT-S-EEEEEEESSGGGGS---S-TTS---HHHH
T ss_pred cCCccceeCCcCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHhcCCCceEEecchhhHHHHhhccCCchhhhhhHHh
Confidence 33 456678999998641 1 124567888999999999888888888887763 332111000
Q ss_pred CCCCCCCcccchhhccCCCC-ceEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhhcC--CCcEEEEcccCCcCCC
Q 048104 142 QFNPGYQVGTDFISNNMIKE-IDFTTIHAYPDQWLPGKNYYAQMQFVQKWLESHWTDSKTIL--KKPLVFSEFGKSCKEA 218 (316)
Q Consensus 142 ~~np~~~~g~d~~~~~~~~~-iD~~t~H~Yp~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~--~KPvvi~EfG~~~~~~ 218 (316)
-+||. ...++.+ +++ -.+++-|.|-..+ +.+ .+.-.++-+.+ .+++ . +..+..+||.+-.++.
T Consensus 250 ff~~~---s~~yi~~--l~~v~~~i~~HsYwt~~----~~~-~l~~~R~~~~~---~~~~-~~~~~~~wqtE~~il~~~~ 315 (384)
T PF14587_consen 250 FFNPD---SSTYIGD--LPNVPNIISGHSYWTDS----PWD-DLRDIRKQLAD---KLDK-YSPGLKYWQTEYCILGDNY 315 (384)
T ss_dssp HHSTT---STT--TT---TTEEEEEEE--TT-SS----SHH-HHHHHHHHHHH---HHHT-TSS--EEEE----S----T
T ss_pred hcCCC---chhhhhc--cccchhheeecccccCC----CHH-HHHHHHHHHHH---HHHh-hCcCCceeeeeeeeccCCc
Confidence 01121 1122222 233 2468999995432 121 12222332322 2233 5 7789999999877642
Q ss_pred CC---CHHHHHHHHHHHH---HHHHHHHHcCCceeeeeeeccccCCCCCCCCCc
Q 048104 219 GF---SINVRDSFLNTIY---MNIYNLARNGGAIGGGMVWQLMAEGMQPYFDGY 266 (316)
Q Consensus 219 g~---~~~~r~~~~~~v~---~~~~~~~~~~~~~~G~~~W~~~~~g~~~~~dg~ 266 (316)
+. ....|+..+...+ ..|..-+.-. .+..|-+|.-... ..|.||.
T Consensus 316 ~~~~~~g~~~~~~m~~aLy~arviH~DL~~a-nassW~wW~a~~~--~~ykdgl 366 (384)
T PF14587_consen 316 EIIEGGGYDRDLGMDTALYVARVIHNDLTYA-NASSWQWWTAISP--YDYKDGL 366 (384)
T ss_dssp TT-SSS-HHHHHHH--HHHHHHHHHHHHHTS---SEEEEEESEES--S--SSSS
T ss_pred ccccCCCcccchhHHHHHHHHHHHHhhhhhc-ccchhHHHHHhcc--ccccCce
Confidence 11 1223554443311 1222222221 2455555554433 4566777
No 39
>PF03662 Glyco_hydro_79n: Glycosyl hydrolase family 79, N-terminal domain ; InterPro: IPR005199 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of endo-beta-N-glucuronidase, or heparanase belonging to glycoside hydrolase family 79 (GH79 from CAZY). Heparan sulphate proteoglycans (HSPGs) play a key role in the self- assembly, insolubility and barrier properties of basement membranes and extracellular matrices. Hence, cleavage of heparan sulphate (HS) affects the integrity and functional state of tissues and thereby fundamental normal and pathological phenomena involving cell migration and response to changes in the extracellular microenvironment. Heparanase degrades HS at specific intrachain sites. The enzyme is synthesized as a latent approximately 65 kDa protein that is processed at the N terminus into a highly active approximately 50 kDa form. Experimental evidence suggests that heparanase may facilitate both tumor cell invasion and neovascularization, both critical steps in cancer progression. The enzyme is also involved in cell migration associated with inflammation and autoimmunity [].; GO: 0016798 hydrolase activity, acting on glycosyl bonds, 0016020 membrane; PDB: 3VNY_A 3VO0_A 3VNZ_A.
Probab=96.62 E-value=0.00064 Score=64.18 Aligned_cols=20 Identities=35% Similarity=0.534 Sum_probs=14.6
Q ss_pred HHHHHHHHHHCCCeEEEeCC
Q 048104 2 LDFVTSEARKYGIRLILSLS 21 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~ 21 (316)
.|.+.+-|++-|++||+.|.
T Consensus 111 wd~l~~F~~~tG~~liFgLN 130 (319)
T PF03662_consen 111 WDELNNFAQKTGLKLIFGLN 130 (319)
T ss_dssp -HHHHHHHHHHT-EEEEEE-
T ss_pred HHHHHHHHHHhCCEEEEEec
Confidence 47788888888888888884
No 40
>COG1874 LacA Beta-galactosidase [Carbohydrate transport and metabolism]
Probab=96.37 E-value=0.016 Score=59.79 Aligned_cols=110 Identities=19% Similarity=0.384 Sum_probs=76.0
Q ss_pred HHHH-HHHHHHCCCeEEEeCCCCCCCCCCch-----hhhHHHHh--cCCC---CCCCCCCccCHHHHHHHHHHHHHHHhc
Q 048104 2 LDFV-TSEARKYGIRLILSLSNNYHDFGGRP-----QYVNWARA--AGAS---VNSDDDFYTNAIVKGYYKNHVKKVLTR 70 (316)
Q Consensus 2 LD~~-l~~A~k~gi~vil~L~n~w~~~Gg~~-----~y~~w~~~--~G~~---~~~~~~fy~d~~~~~~~~~~v~~vv~R 70 (316)
+|-. ++.|.+-||++||.-.. .|+.+ .|++|-.. .|.. ...+.-.++++..++.-...++.+..|
T Consensus 69 ~D~~~l~~a~~~Gl~vil~t~P----~g~~P~Wl~~~~PeiL~~~~~~~~~~~g~r~~~~~~~~~Yr~~~~~i~~~irer 144 (673)
T COG1874 69 LDEIFLERAYKAGLYVILRTGP----TGAPPAWLAKKYPEILAVDENGRVRSDGARENICPVSPVYREYLDRILQQIRER 144 (673)
T ss_pred chHHHHHHHHhcCceEEEecCC----CCCCchHHhcCChhheEecCCCcccCCCcccccccccHHHHHHHHHHHHHHHHH
Confidence 4666 99999999999998632 12221 12333211 1110 123567789998888888888888888
Q ss_pred ccccccccccCCCcEEEEeecCCCCCC---CCCChHHHHHHHHHHHHHHHhcCCC
Q 048104 71 INTITRIAYKDDPTIMAWELINEPRCQ---ADYSGKTLNNWVQEMASYVKSIDNK 122 (316)
Q Consensus 71 ~N~~tg~~ykd~PaI~aWeL~NEP~~~---~~~~~~~~~~w~~e~a~~Iks~Dp~ 122 (316)
.|+++|+|++|.+-||-.|. ++.+...++.|+++-...|+.++-.
T Consensus 145 -------~~~~~~~v~~w~~dneY~~~~~~~~~~~~~f~~wLk~~yg~l~~ln~~ 192 (673)
T COG1874 145 -------LYGNGPAVITWQNDNEYGGHPCYCDYCQAAFRLWLKKGYGSLDNLNEA 192 (673)
T ss_pred -------HhccCCceeEEEccCccCCccccccccHHHHHHHHHhCcchHHhhhhh
Confidence 49999999999999997663 3335577888998877777766654
No 41
>cd06545 GH18_3CO4_chitinase The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas.
Probab=95.14 E-value=0.98 Score=41.12 Aligned_cols=92 Identities=13% Similarity=0.144 Sum_probs=61.3
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhcCCCCCCCCCCccCHHHHHHHHHHHHHHHhcccccccccccC
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAGASVNSDDDFYTNAIVKGYYKNHVKKVLTRINTITRIAYKD 81 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~G~~~~~~~~fy~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd 81 (316)
++.++..|+++|+||++.+.+ |. .+. ......+++.|+.+.+-+..++++ |.=
T Consensus 48 ~~~~~~~~~~~~~kvl~sigg-~~----~~~--------------~~~~~~~~~~r~~fi~~lv~~~~~--------~~~ 100 (253)
T cd06545 48 LNSVVNAAHAHNVKILISLAG-GS----PPE--------------FTAALNDPAKRKALVDKIINYVVS--------YNL 100 (253)
T ss_pred HHHHHHHHHhCCCEEEEEEcC-CC----CCc--------------chhhhcCHHHHHHHHHHHHHHHHH--------hCC
Confidence 456788999999999998743 11 000 112456888999888888888887 655
Q ss_pred CCcEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCeEEEcc
Q 048104 82 DPTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLLEIGL 129 (316)
Q Consensus 82 ~PaI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt~G~ 129 (316)
|---+-||=.... .+.+..+++++...+++. +.++|+..
T Consensus 101 DGIdiDwE~~~~~-------~~~~~~fv~~Lr~~l~~~--~~~lt~av 139 (253)
T cd06545 101 DGIDVDLEGPDVT-------FGDYLVFIRALYAALKKE--GKLLTAAV 139 (253)
T ss_pred CceeEEeeccCcc-------HhHHHHHHHHHHHHHhhc--CcEEEEEc
Confidence 5555666543211 356888999999888763 34666654
No 42
>COG3534 AbfA Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism]
Probab=94.84 E-value=0.24 Score=48.63 Aligned_cols=137 Identities=15% Similarity=0.269 Sum_probs=78.2
Q ss_pred CHHHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhcCCCCCCCCCCccCHHHHHHHHHHHHHHHhccccccccccc
Q 048104 1 GLDFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAGASVNSDDDFYTNAIVKGYYKNHVKKVLTRINTITRIAYK 80 (316)
Q Consensus 1 ~LD~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~G~~~~~~~~fy~d~~~~~~~~~~v~~vv~R~N~~tg~~yk 80 (316)
|...++++|++-|.-..+++.- -.+|.+.-.+|..-... ....+|+| +|. + + =+
T Consensus 106 Gt~EF~~~~e~iGaep~~avN~---Gsrgvd~ar~~vEY~n~---pggtywsd----------lR~--~-----~---G~ 159 (501)
T COG3534 106 GTHEFMDWCELIGAEPYIAVNL---GSRGVDEARNWVEYCNH---PGGTYWSD----------LRR--E-----N---GR 159 (501)
T ss_pred cHHHHHHHHHHhCCceEEEEec---CCccHHHHHHHHHHccC---CCCChhHH----------HHH--h-----c---CC
Confidence 4566778888888888887643 12454443444422110 12233443 111 0 0 12
Q ss_pred CCC-cEEEEeecCCCCCC---CCCChHHHHHHHHHHHHHHHhcCCC-CeEEEcccCccCCCCCCcCCCCCCCCcccchhh
Q 048104 81 DDP-TIMAWELINEPRCQ---ADYSGKTLNNWVQEMASYVKSIDNK-HLLEIGLEGFYGDSIPDKKQFNPGYQVGTDFIS 155 (316)
Q Consensus 81 d~P-aI~aWeL~NEP~~~---~~~~~~~~~~w~~e~a~~Iks~Dp~-hlVt~G~eG~~~~~~~~~~~~np~~~~g~d~~~ 155 (316)
..| .|-.|.|+||-... +....+..-...++.+++.|=.||. -+|.+|+.+- .||.+..-.+-+.
T Consensus 160 ~~P~nvK~w~lGNEm~GpWq~G~~~a~EY~~~A~e~~k~~k~~d~t~e~~v~g~a~~----------~n~~~~~W~~~vl 229 (501)
T COG3534 160 EEPWNVKYWGLGNEMDGPWQCGHKTAPEYGRLANEYRKYMKYFDPTIENVVCGSANG----------ANPTDPNWEAVVL 229 (501)
T ss_pred CCCcccceEEeccccCCCcccccccCHHHHHHHHHHHHHHhhcCccccceEEeecCC----------CCCCchHHHHHHH
Confidence 244 78899999998432 1124567777899999999999996 4677776431 1331100011122
Q ss_pred ccCCCCceEEEeecCCCC
Q 048104 156 NNMIKEIDFTTIHAYPDQ 173 (316)
Q Consensus 156 ~~~~~~iD~~t~H~Yp~~ 173 (316)
..+...+|++|+|.|-.+
T Consensus 230 ~~~~e~vD~ISlH~Y~Gn 247 (501)
T COG3534 230 EEAYERVDYISLHYYKGN 247 (501)
T ss_pred HHHhhhcCeEEEEEecCc
Confidence 245677999999999543
No 43
>PF13200 DUF4015: Putative glycosyl hydrolase domain
Probab=94.77 E-value=3.8 Score=38.90 Aligned_cols=157 Identities=14% Similarity=0.227 Sum_probs=84.1
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHH--hcCCCC-CCCCCCcc---CHHHHHHHHHHHHHHHhcccccc
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWAR--AAGASV-NSDDDFYT---NAIVKGYYKNHVKKVLTRINTIT 75 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~--~~G~~~-~~~~~fy~---d~~~~~~~~~~v~~vv~R~N~~t 75 (316)
+..+++.++++||++|--+..+-+..-.. .-++|+- ..|... .....=|. +++++++..+..++.+.. -+.
T Consensus 63 ~~~l~~~l~e~gIY~IARIv~FkD~~la~-~~pe~av~~~~G~~w~d~~~~~WvnP~~~evw~Y~i~IA~Eaa~~--GFd 139 (316)
T PF13200_consen 63 LKALVKKLKEHGIYPIARIVVFKDPVLAE-AHPEWAVKTKDGSVWRDNEGEAWVNPYSKEVWDYNIDIAKEAAKL--GFD 139 (316)
T ss_pred HHHHHHHHHHCCCEEEEEEEEecChHHhh-hChhhEEECCCCCcccCCCCCccCCCCCHHHHHHHHHHHHHHHHc--CCC
Confidence 57899999999999996544322221100 1233432 112111 11112233 457777777877777764 222
Q ss_pred cc-----cccCCC--cEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCeEEEcccCccCCCCCCcCCCCCCCC
Q 048104 76 RI-----AYKDDP--TIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLLEIGLEGFYGDSIPDKKQFNPGYQ 148 (316)
Q Consensus 76 g~-----~ykd~P--aI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt~G~eG~~~~~~~~~~~~np~~~ 148 (316)
.+ +|-++- .-+.+ .++.... ...+.+..+++.....|+..+ -.|++-.-|.-.... +. ..
T Consensus 140 EIqfDYIRFP~~~~~~~l~y---~~~~~~~-~r~~aI~~Fl~~a~~~l~~~~--v~vSaDVfG~~~~~~------~~-~~ 206 (316)
T PF13200_consen 140 EIQFDYIRFPDEGRLSGLDY---SENDTEE-SRVDAITDFLAYAREELHPYG--VPVSADVFGYVAWSP------DD-MG 206 (316)
T ss_pred EEEeeeeecCCCCccccccc---CCCCCcc-hHHHHHHHHHHHHHHHHhHcC--CCEEEEecccccccC------CC-CC
Confidence 22 222210 00111 1111110 023678899999999888764 466665544311110 11 23
Q ss_pred cccchhhccCCCCceEEEeecCCCCCCC
Q 048104 149 VGTDFISNNMIKEIDFTTIHAYPDQWLP 176 (316)
Q Consensus 149 ~g~d~~~~~~~~~iD~~t~H~Yp~~w~~ 176 (316)
-|+++... .+.+|++|.=+||.+|..
T Consensus 207 iGQ~~~~~--a~~vD~IsPMiYPSh~~~ 232 (316)
T PF13200_consen 207 IGQDFEKI--AEYVDYISPMIYPSHYGP 232 (316)
T ss_pred cCCCHHHH--hhhCCEEEecccccccCc
Confidence 56777654 689999999999999864
No 44
>COG5520 O-Glycosyl hydrolase [Cell envelope biogenesis, outer membrane]
Probab=94.42 E-value=1.7 Score=41.60 Aligned_cols=159 Identities=17% Similarity=0.215 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHHHhcccccccccccCCC-cEEEEeecCCCCCCCC-----CChHHHHHHHHHHHHHHHhcCCCCeEEEc
Q 048104 55 IVKGYYKNHVKKVLTRINTITRIAYKDDP-TIMAWELINEPRCQAD-----YSGKTLNNWVQEMASYVKSIDNKHLLEIG 128 (316)
Q Consensus 55 ~~~~~~~~~v~~vv~R~N~~tg~~ykd~P-aI~aWeL~NEP~~~~~-----~~~~~~~~w~~e~a~~Iks~Dp~hlVt~G 128 (316)
++-..|.+++...|.. ++++- -+.+-.+.|||..... ++++...+|+. .+.+++-...=|..=
T Consensus 146 e~Ya~yA~~l~~fv~~--------m~~nGvnlyalSVQNEPd~~p~~d~~~wtpQe~~rF~~---qyl~si~~~~rV~~p 214 (433)
T COG5520 146 EKYADYADYLNDFVLE--------MKNNGVNLYALSVQNEPDYAPTYDWCWWTPQEELRFMR---QYLASINAEMRVIIP 214 (433)
T ss_pred hHhHHHHHHHHHHHHH--------HHhCCCceeEEeeccCCcccCCCCcccccHHHHHHHHH---HhhhhhccccEEecc
Confidence 3445566666666666 66653 4688999999997632 23344444443 334443332222210
Q ss_pred ccCc-cCCCCCCcCCCCCCCCcccchhhccCCCCceEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhhcCCCcEE
Q 048104 129 LEGF-YGDSIPDKKQFNPGYQVGTDFISNNMIKEIDFTTIHAYPDQWLPGKNYYAQMQFVQKWLESHWTDSKTILKKPLV 207 (316)
Q Consensus 129 ~eG~-~~~~~~~~~~~np~~~~g~d~~~~~~~~~iD~~t~H~Yp~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~KPvv 207 (316)
|.+ +...-+ .| -+....+..++|.+.+|.|...-.. . .. .+...+ ..+|-++
T Consensus 215 -es~~~~~~~~-----dp------~lnDp~a~a~~~ilg~H~Ygg~v~~---~----------p~-~lak~~-~~gKdlw 267 (433)
T COG5520 215 -ESFKDLPNMS-----DP------ILNDPKALANMDILGTHLYGGQVSD---Q----------PY-PLAKQK-PAGKDLW 267 (433)
T ss_pred -hhcccccccc-----cc------cccCHhHhcccceeEeeeccccccc---c----------hh-hHhhCC-CcCCceE
Confidence 111 111111 11 1222335678999999999876321 0 00 111112 2589999
Q ss_pred EEcccCCcCCCCCCHHHHHHHHHHHHHHHHHHHHcCCceeeeeeecccc
Q 048104 208 FSEFGKSCKEAGFSINVRDSFLNTIYMNIYNLARNGGAIGGGMVWQLMA 256 (316)
Q Consensus 208 i~EfG~~~~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~G~~~W~~~~ 256 (316)
++|-=....+++. +.| +... ++..+.....+|+ +.|...|.+..
T Consensus 268 mte~y~~esd~~s--~dr-~~~~-~~~hi~~gm~~gg-~~ayv~W~i~~ 311 (433)
T COG5520 268 MTECYPPESDPNS--ADR-EALH-VALHIHIGMTEGG-FQAYVWWNIRL 311 (433)
T ss_pred EeecccCCCCCCc--chH-HHHH-HHHHHHhhccccC-ccEEEEEEEee
Confidence 9997665554332 233 2222 3444445555564 78888898753
No 45
>PF02055 Glyco_hydro_30: O-Glycosyl hydrolase family 30; InterPro: IPR001139 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 30 GH30 from CAZY comprises enzymes with only one known activity; glucosylceramidase (3.2.1.45 from EC). Family 30 encompasses the mammalian glucosylceramidases. Human acid beta-glucosidase (D-glucosyl-N-acylsphingosine glucohydrolase), cleaves the glucosidic bonds of glucosylceramide and synthetic beta-glucosides []. Any one of over 50 different mutations in the gene of glucocerebrosidase have been found to affect activity of this hydrolase, producing variants of Gaucher disease, the most prevalent lysosomal storage disease [, ].; GO: 0004348 glucosylceramidase activity, 0006665 sphingolipid metabolic process, 0007040 lysosome organization, 0005764 lysosome; PDB: 2VT0_B 1NOF_A 2Y24_A 2WCG_B 2J25_A 3GXM_D 1Y7V_B 2NT0_C 3GXF_C 3GXD_A ....
Probab=93.66 E-value=1.4 Score=44.33 Aligned_cols=173 Identities=17% Similarity=0.167 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHHHHhcccccccccccCCC-cEEEEeecCCCCCCCC---------CChHHHHHHHHH-HHHHHHhcCC-
Q 048104 54 AIVKGYYKNHVKKVLTRINTITRIAYKDDP-TIMAWELINEPRCQAD---------YSGKTLNNWVQE-MASYVKSIDN- 121 (316)
Q Consensus 54 ~~~~~~~~~~v~~vv~R~N~~tg~~ykd~P-aI~aWeL~NEP~~~~~---------~~~~~~~~w~~e-~a~~Iks~Dp- 121 (316)
+++.+.|.+|+...++. |+.+- .|-|--+.|||..... .+++...+|++. +...+|+-.+
T Consensus 200 ~~y~~~yA~Y~vkfi~a--------Y~~~GI~i~aiT~QNEP~~~~~~~~~~~s~~~t~~~~~~Fi~~~LgP~l~~~~~g 271 (496)
T PF02055_consen 200 DEYYQAYADYFVKFIQA--------YKKEGIPIWAITPQNEPDNGSDPNYPWPSMGWTPEEQADFIKNYLGPALRKAGLG 271 (496)
T ss_dssp SHHHHHHHHHHHHHHHH--------HHCTT--ESEEESSSSCCGGGSTT-SSC--B--HHHHHHHHHHTHHHHHHTSTT-
T ss_pred chhHHHHHHHHHHHHHH--------HHHCCCCeEEEeccCCCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 46777788888888887 88764 6888899999985311 245677888876 8889988776
Q ss_pred -CCeEEEcccCccCCCCCCcCCCCCCCCcccchhhccCCCCceEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhh
Q 048104 122 -KHLLEIGLEGFYGDSIPDKKQFNPGYQVGTDFISNNMIKEIDFTTIHAYPDQWLPGKNYYAQMQFVQKWLESHWTDSKT 200 (316)
Q Consensus 122 -~hlVt~G~eG~~~~~~~~~~~~np~~~~g~d~~~~~~~~~iD~~t~H~Yp~~w~~~~~~~~~~~~~~~~i~~~~~~a~~ 200 (316)
+.-|.+..+-... .|.+.. .-+....+.+.||-+.+|.|.+.- . ...+ . ..| ++
T Consensus 272 ~d~kI~~~D~n~~~---------~~~~~~-~il~d~~A~~yv~GiA~HwY~g~~---~--~~~l---~---~~h----~~ 326 (496)
T PF02055_consen 272 KDVKILIYDHNRDN---------LPDYAD-TILNDPEAAKYVDGIAFHWYGGDP---S--PQAL---D---QVH----NK 326 (496)
T ss_dssp TTSEEEEEEEEGGG---------TTHHHH-HHHTSHHHHTTEEEEEEEETTCS----H--CHHH---H---HHH----HH
T ss_pred CceEEEEEecCCcc---------cchhhh-hhhcChhhHhheeEEEEECCCCCc---h--hhHH---H---HHH----HH
Confidence 3333333221110 110000 001111234679999999997631 0 0111 1 112 22
Q ss_pred cCCCcEEEEcccCCcCCCC----CCHHHHHHHHHHHHHHHHHHHHcCCceeeeeeecccc--CCCCCCCC
Q 048104 201 ILKKPLVFSEFGKSCKEAG----FSINVRDSFLNTIYMNIYNLARNGGAIGGGMVWQLMA--EGMQPYFD 264 (316)
Q Consensus 201 ~~~KPvvi~EfG~~~~~~g----~~~~~r~~~~~~v~~~~~~~~~~~~~~~G~~~W~~~~--~g~~~~~d 264 (316)
.-+|.++.+|-.......+ ...=.|...+ ...++..+.++ ..|++.|.+.- .|-++|..
T Consensus 327 ~P~k~l~~TE~~~g~~~~~~~~~~g~w~~~~~y---~~~ii~~lnn~--~~gw~~WNl~LD~~GGP~~~~ 391 (496)
T PF02055_consen 327 FPDKFLLFTEACCGSWNWDTSVDLGSWDRAERY---AHDIIGDLNNW--VSGWIDWNLALDENGGPNWVG 391 (496)
T ss_dssp STTSEEEEEEEESS-STTS-SS-TTHHHHHHHH---HHHHHHHHHTT--EEEEEEEESEBETTS---TT-
T ss_pred CCCcEEEeeccccCCCCcccccccccHHHHHHH---HHHHHHHHHhh--ceeeeeeeeecCCCCCCcccC
Confidence 3689999999754322111 1122333222 12233455554 78999999864 34456643
No 46
>PF12891 Glyco_hydro_44: Glycoside hydrolase family 44; InterPro: IPR024745 This is a family of putative bacterial glycoside hydrolases.; PDB: 3IK2_A 3ZQ9_A 2YJQ_B 2YKK_A 2YIH_A 2EEX_A 2EQD_A 2E0P_A 2E4T_A 2EO7_A ....
Probab=92.85 E-value=0.24 Score=44.92 Aligned_cols=57 Identities=19% Similarity=0.214 Sum_probs=36.2
Q ss_pred HHHHHHHhcccccccccccCC---CcEEEEeecCCCCCCC---------CCChHHHHHHHHHHHHHHHhcCCCCeEE
Q 048104 62 NHVKKVLTRINTITRIAYKDD---PTIMAWELINEPRCQA---------DYSGKTLNNWVQEMASYVKSIDNKHLLE 126 (316)
Q Consensus 62 ~~v~~vv~R~N~~tg~~ykd~---PaI~aWeL~NEP~~~~---------~~~~~~~~~w~~e~a~~Iks~Dp~hlVt 126 (316)
++|..|+++ |+.- -.|-.|.|-|||..-. ..+.+.+..=.-++|++||++||...|+
T Consensus 108 ewV~~l~~~--------~g~a~~~~gvk~y~lDNEP~LW~~TH~dVHP~~~t~~El~~r~i~~AkaiK~~DP~a~v~ 176 (239)
T PF12891_consen 108 EWVNYLVNK--------YGNASTNGGVKYYSLDNEPDLWHSTHRDVHPEPVTYDELRDRSIEYAKAIKAADPDAKVF 176 (239)
T ss_dssp HHHHHHHHH--------H--TTSTTS--EEEESS-GGGHHHHTTTT--S---HHHHHHHHHHHHHHHHHH-TTSEEE
T ss_pred HHHHHHHHH--------HhccccCCCceEEEecCchHhhcccccccCCCCCCHHHHHHHHHHHHHHHHhhCCCCeEe
Confidence 447777777 5543 3688999999998531 1134567777788999999999998764
No 47
>PLN03059 beta-galactosidase; Provisional
Probab=92.55 E-value=0.97 Score=48.02 Aligned_cols=104 Identities=19% Similarity=0.325 Sum_probs=66.8
Q ss_pred HHHHHHHHHHCCCeEEEeCCC----CCCCCCCchhhhHHHHh-cCCCCCCCCCCccCHHHHHHHHHHHHHHHhccccccc
Q 048104 2 LDFVTSEARKYGIRLILSLSN----NYHDFGGRPQYVNWARA-AGASVNSDDDFYTNAIVKGYYKNHVKKVLTRINTITR 76 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n----~w~~~Gg~~~y~~w~~~-~G~~~~~~~~fy~d~~~~~~~~~~v~~vv~R~N~~tg 76 (316)
|.++|.+|++.||+|||-.-- -| .+||.+. |... .|..+. =+||..++..+++++.|+.++-. .+
T Consensus 100 L~~Fl~la~e~GLyvilRpGPYIcAEw-~~GGlP~---WL~~~~~i~~R-----s~d~~fl~~v~~~~~~l~~~l~~-~~ 169 (840)
T PLN03059 100 LVKFIKVVQAAGLYVHLRIGPYICAEW-NFGGFPV---WLKYVPGIEFR-----TDNGPFKAAMQKFTEKIVDMMKS-EK 169 (840)
T ss_pred HHHHHHHHHHcCCEEEecCCcceeeee-cCCCCch---hhhcCCCcccc-----cCCHHHHHHHHHHHHHHHHHHhh-cc
Confidence 678999999999999997532 24 4688754 5432 221111 24788888888888888887310 11
Q ss_pred ccccCCCcEEEEeecCCCCCCCC---CChHHHHHHHHHHHHH
Q 048104 77 IAYKDDPTIMAWELINEPRCQAD---YSGKTLNNWVQEMASY 115 (316)
Q Consensus 77 ~~ykd~PaI~aWeL~NEP~~~~~---~~~~~~~~w~~e~a~~ 115 (316)
.-+++---|++.++-||-..... .+...+.+|+++|+..
T Consensus 170 l~~~~GGPIImvQIENEYGs~~~~~~~~d~~Yl~~l~~~~~~ 211 (840)
T PLN03059 170 LFEPQGGPIILSQIENEYGPVEWEIGAPGKAYTKWAADMAVK 211 (840)
T ss_pred eeecCCCcEEEEEecccccceecccCcchHHHHHHHHHHHHH
Confidence 12345456889999999865421 1235677777777643
No 48
>PRK10785 maltodextrin glucosidase; Provisional
Probab=92.37 E-value=0.51 Score=48.71 Aligned_cols=116 Identities=15% Similarity=0.236 Sum_probs=62.8
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCC------------C-----chhhhHHHHh--cCCC-----CCCCCCC-ccCHHH
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHDFG------------G-----RPQYVNWARA--AGAS-----VNSDDDF-YTNAIV 56 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~~G------------g-----~~~y~~w~~~--~G~~-----~~~~~~f-y~d~~~ 56 (316)
|..++++|+++||||||+++=|..... | ...|.+|+.- .|.. ....-++ +.||++
T Consensus 228 f~~Lv~~aH~rGikVilD~V~NH~~~~~~~f~~~~~~~~ga~~~~~spy~dwf~~~~~~~~~~w~g~~~lPdLN~~np~v 307 (598)
T PRK10785 228 LLRLRHATQQRGMRLVLDGVFNHTGDSHPWFDRHNRGTGGACHHPDSPWRDWYSFSDDGRALDWLGYASLPKLDFQSEEV 307 (598)
T ss_pred HHHHHHHHHHCCCEEEEEECCCcCCCCCHHHHHhhccccccccCCCCCcceeeEECCCCCcCCcCCCCcCccccCCCHHH
Confidence 678999999999999999864321100 0 0112233210 0100 0001122 568888
Q ss_pred HHHHHHHHHHHHhcccccccccccCCC-cEEEEe--ecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCeEEEc
Q 048104 57 KGYYKNHVKKVLTRINTITRIAYKDDP-TIMAWE--LINEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLLEIG 128 (316)
Q Consensus 57 ~~~~~~~v~~vv~R~N~~tg~~ykd~P-aI~aWe--L~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt~G 128 (316)
++...+....|+.+ |-+.| .|=||= ..+|..-.. ....-..+++++.+.||+..|+.++ +|
T Consensus 308 ~~~l~~~~~~v~~~--------Wl~~~~giDG~RlDva~~v~~~~--~~~~~~~f~~~~~~~vk~~~pd~~l-ig 371 (598)
T PRK10785 308 VNEIYRGEDSIVRH--------WLKAPYNIDGWRLDVVHMLGEGG--GARNNLQHVAGITQAAKEENPEAYV-LG 371 (598)
T ss_pred HHHHHhhhhHHHHH--------hhcCCCCCcEEEEecHhHhcccc--CccccHHHHHHHHHHHHhhCCCeEE-EE
Confidence 88777544456665 44432 344543 344421110 0112347889999999999998655 44
No 49
>KOG2230 consensus Predicted beta-mannosidase [Carbohydrate transport and metabolism]
Probab=91.41 E-value=1.1 Score=45.34 Aligned_cols=81 Identities=17% Similarity=0.218 Sum_probs=54.6
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCCCch---hhhHHHHhcCCCC-C----CCCCCccCHHHHHHHHHHHHHHHhcccc
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHDFGGRP---QYVNWARAAGASV-N----SDDDFYTNAIVKGYYKNHVKKVLTRINT 73 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~~Gg~~---~y~~w~~~~G~~~-~----~~~~fy~d~~~~~~~~~~v~~vv~R~N~ 73 (316)
+..+|+.+..-||..+-+ +-||.- .+-.-+..-|.-+ + ...-+.+|.+..+.-+.-|+.=+.|
T Consensus 359 ~~~LL~Sv~e~~MN~lRV------WGGGvYEsd~FY~lad~lGilVWQD~MFACAlYPt~~eFl~sv~eEV~yn~~R--- 429 (867)
T KOG2230|consen 359 TEFLLDSVAEVGMNMLRV------WGGGVYESDYFYQLADSLGILVWQDMMFACALYPTNDEFLSSVREEVRYNAMR--- 429 (867)
T ss_pred HHHHHHHHHHhCcceEEE------ecCccccchhHHHHhhhccceehhhhHHHhhcccCcHHHHHHHHHHHHHHHHh---
Confidence 356788888889988874 224431 1111121122211 1 1345567888888899999999999
Q ss_pred cccccccCCCcEEEEeecCCCCC
Q 048104 74 ITRIAYKDDPTIMAWELINEPRC 96 (316)
Q Consensus 74 ~tg~~ykd~PaI~aWeL~NEP~~ 96 (316)
.+.||+|+-|.--||-+.
T Consensus 430 -----ls~HpSviIfsgNNENEa 447 (867)
T KOG2230|consen 430 -----LSHHPSVIIFSGNNENEA 447 (867)
T ss_pred -----hccCCeEEEEeCCCccHH
Confidence 999999999999999653
No 50
>cd02875 GH18_chitobiase Chitobiase (also known as di-N-acetylchitobiase) is a lysosomal glycosidase that hydrolyzes the reducing-end N-acetylglucosamine from the chitobiose core of oligosaccharides during the ordered degradation of asparagine-linked glycoproteins in eukaryotes. Chitobiase can only do so if the asparagine that joins the oligosaccharide to protein is previously removed by a glycosylasparaginase. Chitobiase is therefore the final step in the lysosomal degradation of the protein/carbohydrate linkage component of asparagine-linked glycoproteins. The catalytic domain of chitobiase is an eight-stranded alpha/beta barrel fold similar to that of other family 18 glycosyl hydrolases such as hevamine and chitotriosidase.
Probab=90.42 E-value=3 Score=40.20 Aligned_cols=92 Identities=16% Similarity=0.124 Sum_probs=64.4
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhcCCCCCCCCCCccCHHHHHHHHHHHHHHHhcccccccccccCC
Q 048104 3 DFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAGASVNSDDDFYTNAIVKGYYKNHVKKVLTRINTITRIAYKDD 82 (316)
Q Consensus 3 D~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~G~~~~~~~~fy~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd~ 82 (316)
+.++..|+++|+||++. |+.+ .....|++.|+.|.+-+-.++.+ |.=|
T Consensus 67 ~~~~~~A~~~~v~v~~~--------~~~~----------------~~~l~~~~~R~~fi~siv~~~~~--------~gfD 114 (358)
T cd02875 67 DELLCYAHSKGVRLVLK--------GDVP----------------LEQISNPTYRTQWIQQKVELAKS--------QFMD 114 (358)
T ss_pred HHHHHHHHHcCCEEEEE--------CccC----------------HHHcCCHHHHHHHHHHHHHHHHH--------hCCC
Confidence 36889999999999975 2111 12356889999998888888887 5545
Q ss_pred CcEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCeEEEcc
Q 048104 83 PTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLLEIGL 129 (316)
Q Consensus 83 PaI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt~G~ 129 (316)
---+-||--+.. .....+.+..+++++.+.+++..++-+||+..
T Consensus 115 GIdIDwE~p~~~---~~~d~~~~t~llkelr~~l~~~~~~~~Lsvav 158 (358)
T cd02875 115 GINIDIEQPITK---GSPEYYALTELVKETTKAFKKENPGYQISFDV 158 (358)
T ss_pred eEEEcccCCCCC---CcchHHHHHHHHHHHHHHHhhcCCCcEEEEEE
Confidence 445667643321 11235678999999999999887777777743
No 51
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase. A sequence from Arabidopsis thaliana, GP|9294564, scores just above trusted, but appears either to contain corrupt sequence or, more likely, to be a pseudogene as some of the conserved catalytic residues common to the alpha amylase family are not conserved here.
Probab=89.02 E-value=2.5 Score=43.78 Aligned_cols=125 Identities=10% Similarity=0.092 Sum_probs=68.1
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCC--------CCCchhhhHHHHhcCC--CCCCCCCCccCHHHHHHHHHHHHHHHhcc
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHD--------FGGRPQYVNWARAAGA--SVNSDDDFYTNAIVKGYYKNHVKKVLTRI 71 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~--------~Gg~~~y~~w~~~~G~--~~~~~~~fy~d~~~~~~~~~~v~~vv~R~ 71 (316)
|-.+|++|+++||+|||++.-|... +.|.+.|-.-....+. .....+-=+.+|.+++...+.++..++..
T Consensus 208 lk~lV~~~H~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~y~~~~~~~~~~~~w~~~~~~~~~~~Vr~~l~~~~~~W~~ey 287 (613)
T TIGR01515 208 FMYFVDACHQAGIGVILDWVPGHFPKDDHGLAEFDGTPLYEHKDPRDGEHWDWGTLIFDYGRPEVRNFLVANALYWAEFY 287 (613)
T ss_pred HHHHHHHHHHCCCEEEEEecccCcCCccchhhccCCCcceeccCCccCcCCCCCCceecCCCHHHHHHHHHHHHHHHHHh
Confidence 6689999999999999998643321 1111111000000000 00011112478999999999999999860
Q ss_pred cccccccccCCCcEEEEeecCCCCC-----CCCCChHHHHHHHHHHHHHHHhcCCCCeEEE
Q 048104 72 NTITRIAYKDDPTIMAWELINEPRC-----QADYSGKTLNNWVQEMASYVKSIDNKHLLEI 127 (316)
Q Consensus 72 N~~tg~~ykd~PaI~aWeL~NEP~~-----~~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt~ 127 (316)
.+.|.++---+.++-++-++++.- ........-..+++++.+.||++.|+.++..
T Consensus 288 -~iDG~R~D~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~v~~~~p~~~lia 347 (613)
T TIGR01515 288 -HIDGLRVDAVASMLYLDYSRDEGEWSPNEDGGRENLEAVDFLRKLNQTVYEAFPGVVTIA 347 (613)
T ss_pred -CCcEEEEcCHHHhhhhccccccccccccccCCcCChHHHHHHHHHHHHHHHHCCCeEEEE
Confidence 122322222234554444444321 1100112356799999999999999865443
No 52
>PF01120 Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR000933 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Family 29 (GH29 from CAZY) encompasses alpha-L-fucosidases (3.2.1.51 from EC) [], which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Alpha-L-fucosidase is responsible for hydrolysing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Fucosylated glycoconjugates are involved in numerous biological events, making alpha-l-fucosidases, the enzymes responsible for their processing, critically important. Deficiency in alpha-l-fucosidase activity is associated with fucosidosis, a lysosomal storage disorder characterised by rapid neurodegeneration, resulting in severe mental and motor deterioration []. The enzyme is a hexamer and displays a two-domain fold, composed of a catalytic (beta/alpha)(8)-like domain and a C-terminal beta-sandwich domain []. Drosophila melanogaster spermatozoa contains an alpha-l-fucosidase that might be involved in fertilisation by interacting with alpha-l-fucose residues on the micropyle of the eggshell []. In human sperm, membrane-associated alpha-l-fucosidase is stable for extended periods of time, which is made possible by membrane domains and compartmentalisation. These help preserve protein integrity []. ; GO: 0004560 alpha-L-fucosidase activity, 0005975 carbohydrate metabolic process; PDB: 3EYP_B 2ZX6_A 2ZWY_B 2ZX8_B 2WSP_A 2ZXA_A 2ZWZ_B 1ODU_B 1HL9_A 2ZX5_B ....
Probab=87.48 E-value=7.1 Score=37.41 Aligned_cols=100 Identities=17% Similarity=0.294 Sum_probs=60.1
Q ss_pred HHHHHHHHHCCCeEEEeCCC-CCCCCC-CchhhhHHHHhcCCCCCCCCCCccCHH-HHHHHHHHHHHHHhcccccccccc
Q 048104 3 DFVTSEARKYGIRLILSLSN-NYHDFG-GRPQYVNWARAAGASVNSDDDFYTNAI-VKGYYKNHVKKVLTRINTITRIAY 79 (316)
Q Consensus 3 D~~l~~A~k~gi~vil~L~n-~w~~~G-g~~~y~~w~~~~G~~~~~~~~fy~d~~-~~~~~~~~v~~vv~R~N~~tg~~y 79 (316)
-.++++|+|+|||+.+.++- .|.... +...... ..+ ....--..++ +.+.+...++++++| |
T Consensus 141 ~El~~A~rk~Glk~G~Y~S~~dw~~~~~~~~~~~~---~~~----~~~~~~~~~~~~~~~~~~ql~EL~~~--------Y 205 (346)
T PF01120_consen 141 GELADACRKYGLKFGLYYSPWDWHHPDYPPDEEGD---ENG----PADGPGNWQRYYNEYWLAQLRELLTR--------Y 205 (346)
T ss_dssp HHHHHHHHHTT-EEEEEEESSSCCCTTTTSSCHCH---HCC------HCCHHHHHHHHHHHHHHHHHHHHC--------S
T ss_pred HHHHHHHHHcCCeEEEEecchHhcCcccCCCccCC---ccc----ccccchhhHhHhhhhhHHHHHHHHhC--------C
Confidence 35789999999999998864 222111 1000000 000 0000000112 344788999999999 9
Q ss_pred cCCCcEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCeEEE
Q 048104 80 KDDPTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLLEI 127 (316)
Q Consensus 80 kd~PaI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt~ 127 (316)
+|.++=+|-....... .+. ..++.+.||++-|+.+|.-
T Consensus 206 --~~d~lWfDg~~~~~~~------~~~--~~~~~~~i~~~qp~~ii~~ 243 (346)
T PF01120_consen 206 --KPDILWFDGGWPDPDE------DWD--SAELYNWIRKLQPDVIINN 243 (346)
T ss_dssp --TESEEEEESTTSCCCT------HHH--HHHHHHHHHHHSTTSEEEC
T ss_pred --CcceEEecCCCCcccc------ccC--HHHHHHHHHHhCCeEEEec
Confidence 8999999988775221 111 2888999999999888754
No 53
>cd06542 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases are bacterial chitinases that hydrolyze the chitin core of various asparagine (N)-linked glycans and glycoproteins. The endo-beta-N-acetylglucosaminidases have a glycosyl hydrolase family 18 (GH18) catalytic domain. Some members also have an additional C-terminal glycosyl hydrolase family 20 (GH20) domain while others have an N-terminal domain of unknown function (pfam08522). Members of this family include endo-beta-N-acetylglucosaminidase S (EndoS) from Streptococcus pyogenes, EndoF1, EndoF2, EndoF3, and EndoH from Flavobacterium meningosepticum, and EndoE from Enterococcus faecalis. EndoS is a secreted endoglycosidase from Streptococcus pyogenes that specifically hydrolyzes the glycan on human IgG between two core N-acetylglucosamine residues. EndoE is a secreted endoglycosidase, encoded by the ndoE gene in Enterococcus faecalis, that hydrolyzes the glycan on human RNase B.
Probab=86.79 E-value=12 Score=33.78 Aligned_cols=123 Identities=15% Similarity=0.159 Sum_probs=70.1
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhcCCCCCCCCCCccCHHHHHHHHHHHHHHHhcccccccccccCC
Q 048104 3 DFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAGASVNSDDDFYTNAIVKGYYKNHVKKVLTRINTITRIAYKDD 82 (316)
Q Consensus 3 D~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~G~~~~~~~~fy~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd~ 82 (316)
...+..++++|+||++++.. |.... +. ....+++.++.|.+.+..++.+ |+=|
T Consensus 54 ~~~i~~l~~kG~KVl~sigg-~~~~~------------~~------~~~~~~~~~~~fa~~l~~~v~~--------yglD 106 (255)
T cd06542 54 ETYIRPLQAKGTKVLLSILG-NHLGA------------GF------ANNLSDAAAKAYAKAIVDTVDK--------YGLD 106 (255)
T ss_pred HHHHHHHhhCCCEEEEEECC-CCCCC------------Cc------cccCCHHHHHHHHHHHHHHHHH--------hCCC
Confidence 34567789999999998732 11100 00 0134667778888888888877 6666
Q ss_pred CcEEEEeecCCCCCC-CCCChHHHHHHHHHHHHHHHhcCC-CCeEEEcccCccCCCCCCcCCCCCCCCcccchhhccCCC
Q 048104 83 PTIMAWELINEPRCQ-ADYSGKTLNNWVQEMASYVKSIDN-KHLLEIGLEGFYGDSIPDKKQFNPGYQVGTDFISNNMIK 160 (316)
Q Consensus 83 PaI~aWeL~NEP~~~-~~~~~~~~~~w~~e~a~~Iks~Dp-~hlVt~G~eG~~~~~~~~~~~~np~~~~g~d~~~~~~~~ 160 (316)
---+-||-.+..... ...+.+.+..+++++.+.+ +| +.++++-..+-+.. .+. ....+
T Consensus 107 GiDiD~E~~~~~~~~~~~~~~~~~~~lv~~Lr~~~---~~~~kllt~~~~~~~~~---------------~~~--~~~~~ 166 (255)
T cd06542 107 GVDFDDEYSGYGKNGTSQPSNEAFVRLIKELRKYM---GPTDKLLTIDGYGQALS---------------NDG--EEVSP 166 (255)
T ss_pred ceEEeeeecccCCCCCCcchHHHHHHHHHHHHHHh---CcCCcEEEEEecCCchh---------------cCH--HHHHH
Confidence 556667765532111 0113456777777776665 44 66777743221100 001 12356
Q ss_pred CceEEEeecCCC
Q 048104 161 EIDFTTIHAYPD 172 (316)
Q Consensus 161 ~iD~~t~H~Yp~ 172 (316)
.+||+.+-.|..
T Consensus 167 ~vDyv~~~~y~~ 178 (255)
T cd06542 167 YVDYVIYQYYGS 178 (255)
T ss_pred hCCEEEeeccCC
Confidence 899988777743
No 54
>PRK12313 glycogen branching enzyme; Provisional
Probab=86.00 E-value=8.5 Score=40.01 Aligned_cols=122 Identities=12% Similarity=0.120 Sum_probs=63.8
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCC--------CCCchhhhHHHHh-cCCC--CCCCCCCccCHHHHHHHHHHHHHHHhc
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHD--------FGGRPQYVNWARA-AGAS--VNSDDDFYTNAIVKGYYKNHVKKVLTR 70 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~--------~Gg~~~y~~w~~~-~G~~--~~~~~~fy~d~~~~~~~~~~v~~vv~R 70 (316)
|..+|++|+++||+|||++.-|... +.|...|. +... .+.. ....+-=|.+|.+++...+.++..++.
T Consensus 222 ~k~lv~~~H~~Gi~VilD~V~nH~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~w~~~~~n~~~~~vr~~l~~~~~~W~~~ 300 (633)
T PRK12313 222 FMYLVDALHQNGIGVILDWVPGHFPKDDDGLAYFDGTPLYE-YQDPRRAENPDWGALNFDLGKNEVRSFLISSALFWLDE 300 (633)
T ss_pred HHHHHHHHHHCCCEEEEEECCCCCCCCcccccccCCCccee-ecCCCCCcCCCCCCcccCCCCHHHHHHHHHHHHHHHHH
Confidence 6789999999999999998643211 11111110 0000 0000 001111257899999999988888875
Q ss_pred ccccccccccCCCcEEEEee-------cCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCeEEEcc
Q 048104 71 INTITRIAYKDDPTIMAWEL-------INEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLLEIGL 129 (316)
Q Consensus 71 ~N~~tg~~ykd~PaI~aWeL-------~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt~G~ 129 (316)
. .+.|.++---+.++..+- .|+-.. ..+ .....+++++.+.||++.|+. +++|-
T Consensus 301 ~-~iDG~R~D~~~~~~~~d~~~~~~~~~~~~~~--~~~-~~~~~fl~~~~~~v~~~~p~~-~liaE 361 (633)
T PRK12313 301 Y-HLDGLRVDAVSNMLYLDYDEEGEWTPNKYGG--REN-LEAIYFLQKLNEVVYLEHPDV-LMIAE 361 (633)
T ss_pred h-CCcEEEEcChhhhhhcccccccCcCCcccCC--CCC-cHHHHHHHHHHHHHHHHCCCe-EEEEE
Confidence 0 122222211111221111 111111 111 134578999999999999985 45543
No 55
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=85.97 E-value=5.3 Score=40.76 Aligned_cols=109 Identities=18% Similarity=0.245 Sum_probs=60.3
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCCC--chhhhHHHHhcCCCCCCCCCCccCH---HHHHHHHHHHHHHHhccccccc
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHDFGG--RPQYVNWARAAGASVNSDDDFYTNA---IVKGYYKNHVKKVLTRINTITR 76 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~~Gg--~~~y~~w~~~~G~~~~~~~~fy~d~---~~~~~~~~~v~~vv~R~N~~tg 76 (316)
|-.+|++|+++||+|||++.=|.....+ .+.|..|........-...-=|.++ .+++.+.+.++..++.
T Consensus 162 ~k~lV~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~~y~~~~~~~~wg~~~n~~~~~~~~vr~~i~~~~~~W~~e------ 235 (542)
T TIGR02402 162 LKALVDAAHGLGLGVILDVVYNHFGPEGNYLPRYAPYFTDRYSTPWGAAINFDGPGSDEVRRYILDNALYWLRE------ 235 (542)
T ss_pred HHHHHHHHHHCCCEEEEEEccCCCCCccccccccCccccCCCCCCCCCccccCCCcHHHHHHHHHHHHHHHHHH------
Confidence 5689999999999999998643211111 1112222211000000011114566 8888888888888875
Q ss_pred ccccCCCcEEEEee--cCCCCCCCCCChHHHHHHHHHHHHHHHhcCCC--CeEEEc
Q 048104 77 IAYKDDPTIMAWEL--INEPRCQADYSGKTLNNWVQEMASYVKSIDNK--HLLEIG 128 (316)
Q Consensus 77 ~~ykd~PaI~aWeL--~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~--hlVt~G 128 (316)
|+=| +|-+ +.... + ..-..+++++.+.+|++.|+ +.+.+|
T Consensus 236 --~~iD----GfR~D~~~~~~---~---~~~~~~l~~~~~~~~~~~p~~~~~~li~ 279 (542)
T TIGR02402 236 --YHFD----GLRLDAVHAIA---D---TSAKHILEELAREVHELAAELRPVHLIA 279 (542)
T ss_pred --hCCc----EEEEeCHHHhc---c---ccHHHHHHHHHHHHHHHCCCCceEEEEE
Confidence 4433 3322 11110 0 01246899999999999987 344554
No 56
>cd06547 GH85_ENGase Endo-beta-N-acetylglucosaminidase (ENGase) hydrolyzes the N-N'-diacetylchitobiosyl core of N-glycosylproteins. The beta-1,4-glycosyl bond located between two N-acetylglucosamine residues is hydrolyzed such that N-acetylglucosamine 1 remains with the protein and N-acetylglucosamine 2 forms the reducing end of the released glycan. ENGase is a key enzyme in the processing of free oligosaccharides in the cytosol of eukaryotes. Oligosaccharides formed in the lumen of the endoplasmic reticulum are transported into the cytosol where they are catabolized by cytosolic ENGases and other enzymes, possibly to maximize the reutilization of the component sugars. ENGases have an eight-stranded alpha/beta barrel topology and are classified as a family 85 glycosyl hydrolase (GH85) domain. The GH85 ENGases are sequence-similar to the family 18 glycosyl hydrolases, also known as GH18 chitinases. An ENGase-like protein is also found in bacteria and is included in this alignment mod
Probab=85.61 E-value=1.7 Score=41.73 Aligned_cols=94 Identities=15% Similarity=0.197 Sum_probs=65.7
Q ss_pred HHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhcCCCCCCCCCCccC-HHHHHHHHHHHHHHHhcccccccccccCCC
Q 048104 5 VTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAGASVNSDDDFYTN-AIVKGYYKNHVKKVLTRINTITRIAYKDDP 83 (316)
Q Consensus 5 ~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~G~~~~~~~~fy~d-~~~~~~~~~~v~~vv~R~N~~tg~~ykd~P 83 (316)
+++.|+|+|++|+-+++..|. ++. .|. ..+..+ ++.+..+.+.+-.|+.. |+=|-
T Consensus 51 ~idaAHknGV~Vlgti~~e~~--~~~----~~~----------~~lL~~~~~~~~~~a~kLv~lak~--------yGfDG 106 (339)
T cd06547 51 WINAAHRNGVPVLGTFIFEWT--GQV----EWL----------EDFLKKDEDGSFPVADKLVEVAKY--------YGFDG 106 (339)
T ss_pred HHHHHHhcCCeEEEEEEecCC--Cch----HHH----------HHHhccCcccchHHHHHHHHHHHH--------hCCCc
Confidence 678999999999999987664 332 222 133444 66777788888888887 77774
Q ss_pred cEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCeEE
Q 048104 84 TIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLLE 126 (316)
Q Consensus 84 aI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt 126 (316)
|.+-=|-........+.+.+|++++.+..|+..|+-.|.
T Consensus 107 ----w~iN~E~~~~~~~~~~~l~~F~~~L~~~~~~~~~~~~v~ 145 (339)
T cd06547 107 ----WLINIETELGDAEKAKRLIAFLRYLKAKLHENVPGSLVI 145 (339)
T ss_pred ----eEeeeeccCCcHHHHHHHHHHHHHHHHHHhhcCCCcEEE
Confidence 444333322111135789999999999999999987775
No 57
>cd06564 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 (GH20) catalytic domain of dispersin B (DspB), lacto-N-biosidase (LnbB) and related proteins. Dispersin B is a soluble beta-N-acetylglucosamidase found in bacteria that hydrolyzes the beta-1,6-linkages of PGA (poly-beta-(1,6)-N-acetylglucosamine), a major component of the extracellular polysaccharide matrix. Lacto-N-biosidase hydrolyzes lacto-N-biose (LNB) type I oligosaccharides at the nonreducing terminus to produce lacto-N-biose as part of the GNB/LNB (galacto-N-biose/lacto-N-biose I) degradation pathway. The lacto-N-biosidase from Bifidobacterium bifidum has this GH20 domain, a carbohydrate binding module 32, and a bacterial immunoglobulin-like domain 2, as well as a YSIRK signal peptide and a G5 membrane anchor at the N and C termini, respectively. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=85.52 E-value=8.4 Score=36.52 Aligned_cols=111 Identities=16% Similarity=0.200 Sum_probs=67.1
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhcCCC-----CCCCCCCccCHHHHHHHHHHHHHHHhcccc-cc
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAGAS-----VNSDDDFYTNAIVKGYYKNHVKKVLTRINT-IT 75 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~G~~-----~~~~~~fy~d~~~~~~~~~~v~~vv~R~N~-~t 75 (316)
+..+++-|++|||.||.-+ +..|.+.....+...-+.. .....--.++|++.+..++.+++++.-..+ ..
T Consensus 84 i~eiv~yA~~rgI~vIPEI----D~PGH~~a~~~~~pel~~~~~~~~~~~~~l~~~~~~t~~f~~~l~~E~~~~f~~~~~ 159 (326)
T cd06564 84 FKELIAYAKDRGVNIIPEI----DSPGHSLAFTKAMPELGLKNPFSKYDKDTLDISNPEAVKFVKALFDEYLDGFNPKSD 159 (326)
T ss_pred HHHHHHHHHHcCCeEeccC----CCcHHHHHHHHhhHHhcCCCcccCCCcccccCCCHHHHHHHHHHHHHHHHhcCCCCC
Confidence 4578999999999999866 3556665433333221211 011122357899999999999999997321 11
Q ss_pred cccccCCCcEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCeEEEc
Q 048104 76 RIAYKDDPTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLLEIG 128 (316)
Q Consensus 76 g~~ykd~PaI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt~G 128 (316)
=+..+.|.. .+. ....+.+..|+++|+++|++.. ..++.-+
T Consensus 160 ~~HiGgDE~------~~~-----~~~~~~~~~f~~~~~~~v~~~g-k~~~~W~ 200 (326)
T cd06564 160 TVHIGADEY------AGD-----AGYAEAFRAYVNDLAKYVKDKG-KTPRVWG 200 (326)
T ss_pred EEEeccccc------ccc-----CccHHHHHHHHHHHHHHHHHcC-CeEEEeC
Confidence 112222221 111 1124678899999999999984 4455444
No 58
>PRK05402 glycogen branching enzyme; Provisional
Probab=85.26 E-value=9 Score=40.54 Aligned_cols=122 Identities=13% Similarity=0.160 Sum_probs=62.9
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCC--------CCCchhhhHHHHh--cCC--CCCCCCCCccCHHHHHHHHHHHHHHHh
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHD--------FGGRPQYVNWARA--AGA--SVNSDDDFYTNAIVKGYYKNHVKKVLT 69 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~--------~Gg~~~y~~w~~~--~G~--~~~~~~~fy~d~~~~~~~~~~v~~vv~ 69 (316)
|-.+|++|+++||+|||++.-|... +.|...|. ... .|. .......=|.+|.+++...+.++..++
T Consensus 317 fk~lV~~~H~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~y~--~~~~~~~~~~~w~~~~~n~~~~~v~~~l~~~~~~W~~ 394 (726)
T PRK05402 317 FRYFVDACHQAGIGVILDWVPAHFPKDAHGLARFDGTALYE--HADPREGEHPDWGTLIFNYGRNEVRNFLVANALYWLE 394 (726)
T ss_pred HHHHHHHHHHCCCEEEEEECCCCCCCCccchhccCCCccee--ccCCcCCccCCCCCccccCCCHHHHHHHHHHHHHHHH
Confidence 5689999999999999998643221 11111110 000 000 000011126789999999999988887
Q ss_pred cccccccccccCCCcEEEEeecCC-----CCCCCCCChHHHHHHHHHHHHHHHhcCCCCeEE
Q 048104 70 RINTITRIAYKDDPTIMAWELINE-----PRCQADYSGKTLNNWVQEMASYVKSIDNKHLLE 126 (316)
Q Consensus 70 R~N~~tg~~ykd~PaI~aWeL~NE-----P~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt 126 (316)
.. .+.|.++---..++-++-... |.............+++++.+.||++.|+.++.
T Consensus 395 e~-~iDG~R~D~v~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~fl~~~~~~~~~~~p~~~li 455 (726)
T PRK05402 395 EF-HIDGLRVDAVASMLYLDYSRKEGEWIPNIYGGRENLEAIDFLRELNAVVHEEFPGALTI 455 (726)
T ss_pred Hh-CCcEEEECCHHHhhhccccccccccccccccCcCCHHHHHHHHHHHHHHHHHCCCeEEE
Confidence 60 111211110011221111100 111110111245678999999999999986543
No 59
>TIGR01370 cysRS possible cysteinyl-tRNA synthetase, Methanococcus type. Assignment of this protein family as cysteinyl-tRNA synthetase is controversial, supported by PubMed:11333988 but challenged by PubMed:14679218. Members of this family from Deinococcus radiodurans (bacterial) and Methanococcus jannaschii (archaeal), species lacking a conventional cysteinyl-tRNA synthetase (Cys--tRNA ligase), have been indicated to be a novel form of that enzyme, perhaps distantly related to class I tRNA ligases. The member from Thermotoga maritima is presumed to be a second isozyme of cysteinyl-tRNA synthetase. A number of homologous but more distantly related proteins are annotated as alpha-1,4 polygalactosaminidases.
Probab=84.69 E-value=30 Score=32.89 Aligned_cols=72 Identities=18% Similarity=0.239 Sum_probs=49.1
Q ss_pred ccCHHHHHHHHHHHHHHHhcccccccccccCCCcEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCeEEE
Q 048104 51 YTNAIVKGYYKNHVKKVLTRINTITRIAYKDDPTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLLEI 127 (316)
Q Consensus 51 y~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd~PaI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt~ 127 (316)
+.+++.++...++++.++.+ -+.|+ |=| ++=+|+..+|.........+.+.+++.++++++|+.-|+-+|..
T Consensus 140 ~~~~~W~~il~~rl~~l~~k--GfDGv-fLD--~lDsy~~~~~~~~~~~~~~~~m~~~i~~Ia~~ar~~~P~~~II~ 211 (315)
T TIGR01370 140 YWDPEWKAIAFSYLDRVIAQ--GFDGV-YLD--LIDAFEYWAENGDNRPGAAAEMIAFVCEIAAYARAQNPQFVIIP 211 (315)
T ss_pred cccHHHHHHHHHHHHHHHHc--CCCeE-eec--cchhhhhhcccCCcchhhHHHHHHHHHHHHHHHHHHCCCEEEEe
Confidence 45678888888888877766 45555 222 35567777665432122345788999999999999999966543
No 60
>COG1649 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=84.44 E-value=3.2 Score=40.86 Aligned_cols=152 Identities=15% Similarity=0.179 Sum_probs=87.4
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCCCch--------hhhHHHHhcCCCC----CCC--CCCcc---CHHHHHHHHHHH
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHDFGGRP--------QYVNWARAAGASV----NSD--DDFYT---NAIVKGYYKNHV 64 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~~Gg~~--------~y~~w~~~~G~~~----~~~--~~fy~---d~~~~~~~~~~v 64 (316)
|=.+|++|+|+||+|+.=| .+|.+. ..++|........ ... ..++- .|++++.+.+.|
T Consensus 117 La~~I~~AHkr~l~v~aWf-----~~~~~a~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ldPg~Pevq~~i~~lv 191 (418)
T COG1649 117 LAFVIAEAHKRGLEVHAWF-----NPYRMAPPTSPLTKRHPHWLTTKRPGWVYVRHQGWGKRVWLDPGIPEVQDFITSLV 191 (418)
T ss_pred HHHHHHHHHhcCCeeeech-----hhcccCCCCChhHhhCCCCcccCCCCeEEEecCCceeeeEeCCCChHHHHHHHHHH
Confidence 4478999999999998632 333321 1222221110000 011 35554 469999999999
Q ss_pred HHHHhcccccccccccCCC----cEEEE----------------eecCCCCCCC----CCChHHHHHHHHHHHHHHHhcC
Q 048104 65 KKVLTRINTITRIAYKDDP----TIMAW----------------ELINEPRCQA----DYSGKTLNNWVQEMASYVKSID 120 (316)
Q Consensus 65 ~~vv~R~N~~tg~~ykd~P----aI~aW----------------eL~NEP~~~~----~~~~~~~~~w~~e~a~~Iks~D 120 (316)
..||++ |.=|+ -++.| |-++.|-... +...+.+.+++.+++..||++.
T Consensus 192 ~evV~~--------YdvDGIQfDd~fy~~~~~gy~~~~~~~y~~et~~~~~~~~~~w~~WRr~~i~~~v~~i~~~VKavK 263 (418)
T COG1649 192 VEVVRN--------YDVDGIQFDDYFYYPIPFGYDPDTVTLYRYETGKGPPSNPDQWTDWRRDNITALVAQISQTVKAVK 263 (418)
T ss_pred HHHHhC--------CCCCceecceeecccCccccCchHHHHHHhhccCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHhhC
Confidence 999999 65553 22332 1112111110 0112345566899999999999
Q ss_pred CCCeEEEcccCccCCCCCCcCCCCCCCCcccchhhccCCCCceEEEeecCCC
Q 048104 121 NKHLLEIGLEGFYGDSIPDKKQFNPGYQVGTDFISNNMIKEIDFTTIHAYPD 172 (316)
Q Consensus 121 p~hlVt~G~eG~~~~~~~~~~~~np~~~~g~d~~~~~~~~~iD~~t~H~Yp~ 172 (316)
|+-.+++.-- +........++ ....|+........||++..-.|-.
T Consensus 264 p~v~~svsp~---n~~~~~~f~y~---~~~qDw~~Wv~~G~iD~l~pqvYr~ 309 (418)
T COG1649 264 PNVKFSVSPF---NPLGSATFAYD---YFLQDWRRWVRQGLIDELAPQVYRT 309 (418)
T ss_pred CCeEEEEccC---CCCCccceehh---hhhhhHHHHHHcccHhhhhhhhhcc
Confidence 9999998651 10000001111 2345777777788999999888854
No 61
>TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase. Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor.
Probab=83.37 E-value=12 Score=38.05 Aligned_cols=75 Identities=17% Similarity=0.133 Sum_probs=42.7
Q ss_pred ccCHHHHHHHHHHHHHHHhcccccccccccCCCcEEEE-eecCCCCCC---CCCChHHHHHHHHHHHHHHHhcCCCCeEE
Q 048104 51 YTNAIVKGYYKNHVKKVLTRINTITRIAYKDDPTIMAW-ELINEPRCQ---ADYSGKTLNNWVQEMASYVKSIDNKHLLE 126 (316)
Q Consensus 51 y~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd~PaI~aW-eL~NEP~~~---~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt 126 (316)
|++|.+++...+.++..+++ -+.|.++---..|.-. .+.++|... .....+...+|++++.+.+|+ .|. .++
T Consensus 166 ~~np~v~~~i~~~~~~W~~~--giDGfRlDa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~-~~~-~~l 241 (543)
T TIGR02403 166 WENPEVREELKDVVNFWRDK--GVDGFRLDVINLISKDQFFEDDEIGDGRRFYTDGPRVHEYLQEMNQEVFG-DND-SVT 241 (543)
T ss_pred CCCHHHHHHHHHHHHHHHHc--CCCEEEEeeehhhccCcccCCCCCCCCccccCCChHHHHHHHHHHHHhhc-cCC-eEE
Confidence 56899999999999988864 4444433111111000 011222100 001235678899999999988 665 556
Q ss_pred Ecc
Q 048104 127 IGL 129 (316)
Q Consensus 127 ~G~ 129 (316)
+|-
T Consensus 242 vgE 244 (543)
T TIGR02403 242 VGE 244 (543)
T ss_pred EEE
Confidence 664
No 62
>TIGR02103 pullul_strch alpha-1,6-glucosidases, pullulanase-type. Members of this protein family include secreted (or membrane-anchored) pullulanases of Gram-negative bacteria and pullulanase-type starch debranching enzymes of plants. Both enzymes hydrolyze alpha-1,6 glycosidic linkages. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family is closely homologous to, but architecturally different from, the Gram-positive pullulanases of Gram-positive bacteria (TIGR02102).
Probab=82.19 E-value=14 Score=39.97 Aligned_cols=109 Identities=13% Similarity=0.182 Sum_probs=64.5
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCCCc------hhhhHH-HHh---cCCCC--CCCCCC-ccCHHHHHHHHHHHHHHH
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHDFGGR------PQYVNW-ARA---AGASV--NSDDDF-YTNAIVKGYYKNHVKKVL 68 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~~Gg~------~~y~~w-~~~---~G~~~--~~~~~f-y~d~~~~~~~~~~v~~vv 68 (316)
|-.+|++|+++||+|||++.=|....+|. +.++.| +.. .|... ....++ ..++.+++...+.++..+
T Consensus 406 fk~mV~alH~~Gi~VIlDVVyNHt~~~g~~~~s~ld~~~P~YY~r~~~~G~~~n~~~~~d~a~e~~~Vrk~iiDsl~~W~ 485 (898)
T TIGR02103 406 FREMVQALNKTGLNVVMDVVYNHTNASGPNDRSVLDKIVPGYYHRLNEDGGVENSTCCSNTATEHRMMAKLIVDSLVVWA 485 (898)
T ss_pred HHHHHHHHHHCCCEEEEEeecccccccCccCcccccccCcHhhEeeCCCCCeecCCCCcCCCCCCHHHHHHHHHHHHHHH
Confidence 56789999999999999986443222221 112222 110 11100 011122 346788888889898888
Q ss_pred hcccccccccccCCCcEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCeEEEcccCc
Q 048104 69 TRINTITRIAYKDDPTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLLEIGLEGF 132 (316)
Q Consensus 69 ~R~N~~tg~~ykd~PaI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt~G~eG~ 132 (316)
.. |+=|- +=+||+... -..+++++.+.+|+++|+- +.+| |||
T Consensus 486 ~e--------y~VDG--FRfDlm~~~----------~~~f~~~~~~~l~~i~pdi-~l~G-EgW 527 (898)
T TIGR02103 486 KD--------YKVDG--FRFDLMGHH----------PKAQMLAAREAIKALTPEI-YFYG-EGW 527 (898)
T ss_pred HH--------cCCCE--EEEechhhC----------CHHHHHHHHHHHHHhCCCE-EEEe-cCC
Confidence 76 55442 224555332 2356788888999999984 3444 676
No 63
>COG3664 XynB Beta-xylosidase [Carbohydrate transport and metabolism]
Probab=82.12 E-value=13 Score=36.43 Aligned_cols=162 Identities=17% Similarity=0.141 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHHHHhcccccccccccCC-CcEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCeEEEcccCcc
Q 048104 55 IVKGYYKNHVKKVLTRINTITRIAYKDD-PTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLLEIGLEGFY 133 (316)
Q Consensus 55 ~~~~~~~~~v~~vv~R~N~~tg~~ykd~-PaI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt~G~eG~~ 133 (316)
..++..+.++++++.| |+-. -+...++..|||+...+ -+.+.+-..-++. +.+|.-.| |. .+
T Consensus 82 ~~~dl~~~fl~h~~~~--------vg~e~v~kw~f~~~~~pn~~ad--~~eyfk~y~~~a~---~~~p~i~v--g~--~w 144 (428)
T COG3664 82 SVFDLIAAFLKHVIRR--------VGVEFVRKWPFYSPNEPNLLAD--KQEYFKLYDATAR---QRAPSIQV--GG--SW 144 (428)
T ss_pred hHHHHHHHHHHHHHHH--------hChhheeecceeecCCCCcccc--hHHHHHHHHhhhh---ccCcceee--cc--cc
Confidence 5888899999999999 5532 35677899999998642 2334444444444 66665443 21 11
Q ss_pred CCCCCCcCCCCCCCCcccchhhccCCCCceEEEeecCCCCCC--CCCChH--------HHHHHHHHHHHHHHHHhhhcCC
Q 048104 134 GDSIPDKKQFNPGYQVGTDFISNNMIKEIDFTTIHAYPDQWL--PGKNYY--------AQMQFVQKWLESHWTDSKTILK 203 (316)
Q Consensus 134 ~~~~~~~~~~np~~~~g~d~~~~~~~~~iD~~t~H~Yp~~w~--~~~~~~--------~~~~~~~~~i~~~~~~a~~~~~ 203 (316)
||. .-.-|.+ ..+.|||++.|.|.-.=. ...+.+ ..++- .+.+.+.++.. .+|
T Consensus 145 ----------~~e--~l~~~~k--~~d~idfvt~~a~~~~av~~~~~~~~~~~l~~~~~~l~~-~r~~~d~i~~~--~~~ 207 (428)
T COG3664 145 ----------NTE--RLHEFLK--KADEIDFVTELANSVDAVDFSTPGAEEVKLSELKRTLED-LRGLKDLIQHH--SLG 207 (428)
T ss_pred ----------CcH--HHhhhhh--ccCcccceeecccccccccccCCCchhhhhhhhhhhhhH-HHHHHHHHHhc--cCC
Confidence 221 0011222 467899999999964311 001111 11111 12233333332 279
Q ss_pred CcEEEEcccCCcCCCCCCHHHHHHHHHH--HHHHHHHHHHcCCceeeeeeecccc
Q 048104 204 KPLVFSEFGKSCKEAGFSINVRDSFLNT--IYMNIYNLARNGGAIGGGMVWQLMA 256 (316)
Q Consensus 204 KPvvi~EfG~~~~~~g~~~~~r~~~~~~--v~~~~~~~~~~~~~~~G~~~W~~~~ 256 (316)
+|+++.||-...... ....+.|++. +..++.+ .+++..+--+|.+.+
T Consensus 208 ~pl~~~~wntlt~~~---~~~n~sy~raa~i~~~Lr~---~g~~v~a~~yW~~sd 256 (428)
T COG3664 208 LPLLLTNWNTLTGPR---EPTNGSYVRAAYIMRLLRE---AGSPVDAFGYWTNSD 256 (428)
T ss_pred CcceeecccccCCCc---cccCceeehHHHHHHHHHh---cCChhhhhhhhhccc
Confidence 999999999776431 1122344442 2222222 355677778899875
No 64
>TIGR02104 pulA_typeI pullulanase, type I. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases.
Probab=80.37 E-value=13 Score=38.54 Aligned_cols=105 Identities=16% Similarity=0.244 Sum_probs=58.4
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCCCchhhh----HHH---HhcCCCC--CC-CCCC-ccCHHHHHHHHHHHHHHHhc
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHDFGGRPQYV----NWA---RAAGASV--NS-DDDF-YTNAIVKGYYKNHVKKVLTR 70 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~----~w~---~~~G~~~--~~-~~~f-y~d~~~~~~~~~~v~~vv~R 70 (316)
|-.+|++|+++||+|||++.=|....+....|. .|. ...|... .. ..++ +.+|.+++...+.++..++.
T Consensus 231 fk~lV~~~H~~Gi~VilDvV~NH~~~~~~~~f~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~v~~~i~~~~~~W~~e 310 (605)
T TIGR02104 231 LKQMIQALHENGIRVIMDVVYNHTYSREESPFEKTVPGYYYRYNEDGTLSNGTGVGNDTASEREMMRKFIVDSVLYWVKE 310 (605)
T ss_pred HHHHHHHHHHCCCEEEEEEEcCCccCCCCCcccCCCCCeeEEECCCCCccCCCcccCCcccCCHHHHHHHHHHHHHHHHH
Confidence 678999999999999999764321100000010 011 0001000 00 0122 35788999999988888876
Q ss_pred ccccccccccCCCcEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCeEE
Q 048104 71 INTITRIAYKDDPTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLLE 126 (316)
Q Consensus 71 ~N~~tg~~ykd~PaI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt 126 (316)
|+=|- +=.+++.... ..+++++...||+++|+..+.
T Consensus 311 --------~~iDG--fR~D~~~~~~----------~~~~~~~~~~~~~~~p~~~li 346 (605)
T TIGR02104 311 --------YNIDG--FRFDLMGIHD----------IETMNEIRKALNKIDPNILLY 346 (605)
T ss_pred --------cCCCE--EEEechhcCC----------HHHHHHHHHHHHhhCCCeEEE
Confidence 44331 1123342210 246788888999999975443
No 65
>cd06565 GH20_GcnA-like Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins. GcnA is an exoglucosidase which cleaves N-acetyl-beta-D-galactosamine (NAG) and N-acetyl-beta-D-galactosamine residues from 4-methylumbelliferylated (4MU) substrates, as well as cleaving NAG from chito-oligosaccharides (i.e. NAG polymers). In contrast, sulfated forms of the substrate are unable to be cleaved and act instead as mild competitive inhibitors. Additionally, the enzyme is known to be poisoned by several first-row transition metals as well as by mercury. GcnA forms a homodimer with subunits comprised of three domains, an N-terminal zincin-like domain, this central catalytic GH20 domain, and a C-terminal alpha helical domain. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=80.22 E-value=12 Score=35.13 Aligned_cols=119 Identities=11% Similarity=0.069 Sum_probs=69.6
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhcCCC-C--CCCCCCccCHHHHHHHHHHHHHHHhccccccccc
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAGAS-V--NSDDDFYTNAIVKGYYKNHVKKVLTRINTITRIA 78 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~G~~-~--~~~~~fy~d~~~~~~~~~~v~~vv~R~N~~tg~~ 78 (316)
+..+++-|++|||.||..+ +.+|.+.....|-.-.... . ....-..++|+..+..++.+++++.-.. ..=+.
T Consensus 62 i~ei~~yA~~~gI~vIPei----d~pGH~~~~l~~~~~~~l~~~~~~~~~l~~~~~~t~~fi~~li~ev~~~f~-s~~~H 136 (301)
T cd06565 62 IREIDDYAAELGIEVIPLI----QTLGHLEFILKHPEFRHLREVDDPPQTLCPGEPKTYDFIEEMIRQVLELHP-SKYIH 136 (301)
T ss_pred HHHHHHHHHHcCCEEEecC----CCHHHHHHHHhCcccccccccCCCCCccCCCChhHHHHHHHHHHHHHHhCC-CCeEE
Confidence 4578999999999999976 3456654433321100100 0 1122346789999999999999998621 00111
Q ss_pred ccCCCcEEEEeecCCCCCC---CCCChHHHHHHHHHHHHHHHhcCCCCeEEEcc
Q 048104 79 YKDDPTIMAWELINEPRCQ---ADYSGKTLNNWVQEMASYVKSIDNKHLLEIGL 129 (316)
Q Consensus 79 ykd~PaI~aWeL~NEP~~~---~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt~G~ 129 (316)
.+.|.+ ++++--+.+. .....+.+..+++++++.||+..+ .++.-+.
T Consensus 137 IG~DE~---~~~g~~~~~~~~~~~~~~~l~~~~~~~v~~~v~~~g~-~~~~W~D 186 (301)
T cd06565 137 IGMDEA---YDLGRGRSLRKHGNLGRGELYLEHLKKVLKIIKKRGP-KPMMWDD 186 (301)
T ss_pred ECCCcc---cccCCCHHHHHhcCCCHHHHHHHHHHHHHHHHHHcCC-EEEEEhH
Confidence 222322 2232211111 111235688999999999999987 5666554
No 66
>cd00598 GH18_chitinase-like The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods. Chitinases have been identified in viruses, bacteria, fungi, protozoan parasites, insects, and plants. The structure of the GH18 domain is an eight-stranded beta/alpha barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel. The GH18 family includes chitotriosidase, chitobiase, hevamine, zymocin-alpha, narbonin, SI-CLP (stabilin-1 interacting chitinase-like protein), IDGF (imaginal disc growth factor), CFLE (cortical fragment-lytic enzyme) spore hydrolase, the type III and type V plant chitinases, the endo-beta-N-acetylglucosaminidases, and the chitolectins. The GH85 (glycosyl hydrolase, family 85) ENGases (endo-beta-N-acetylglucosaminidases) are closely related to the GH18 chitinases and are inclu
Probab=80.20 E-value=21 Score=30.80 Aligned_cols=122 Identities=18% Similarity=0.288 Sum_probs=70.8
Q ss_pred HHHHHHHC--CCeEEEeCCCCCCCCCCchhhhHHHHhcCCCCCCCCCCccCHHHHHHHHHHHHHHHhcccccccccccCC
Q 048104 5 VTSEARKY--GIRLILSLSNNYHDFGGRPQYVNWARAAGASVNSDDDFYTNAIVKGYYKNHVKKVLTRINTITRIAYKDD 82 (316)
Q Consensus 5 ~l~~A~k~--gi~vil~L~n~w~~~Gg~~~y~~w~~~~G~~~~~~~~fy~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd~ 82 (316)
.+..++++ |+||++.+. |... + .......+++.++.+.+.+..++.+ |+=|
T Consensus 54 ~i~~l~~~~~g~kv~~sig-------g~~~--------~----~~~~~~~~~~~~~~f~~~~~~~v~~--------~~~D 106 (210)
T cd00598 54 ALEELASKKPGLKVLISIG-------GWTD--------S----SPFTLASDPASRAAFANSLVSFLKT--------YGFD 106 (210)
T ss_pred HHHHHHHhCCCCEEEEEEc-------CCCC--------C----CCchhhcCHHHHHHHHHHHHHHHHH--------cCCC
Confidence 35556665 999999884 3210 0 0013457888888888888888887 6666
Q ss_pred CcEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCeEEEcccCccCCCCCCcCCCCCCCCcccchhhccCCCCc
Q 048104 83 PTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLLEIGLEGFYGDSIPDKKQFNPGYQVGTDFISNNMIKEI 162 (316)
Q Consensus 83 PaI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt~G~eG~~~~~~~~~~~~np~~~~g~d~~~~~~~~~i 162 (316)
---+=||-...... ...+.+..+++++...+++. +-+||+........ ...+.+.. .....+
T Consensus 107 GidiD~E~~~~~~~---~~~~~~~~ll~~lr~~l~~~--~~~ls~a~~~~~~~-----------~~~~~~~~--~l~~~v 168 (210)
T cd00598 107 GVDIDWEYPGAADN---SDRENFITLLRELRSALGAA--NYLLTIAVPASYFD-----------LGYAYDVP--AIGDYV 168 (210)
T ss_pred ceEEeeeCCCCcCc---cHHHHHHHHHHHHHHHhccc--CcEEEEEecCChHH-----------hhccCCHH--HHHhhC
Confidence 55566764332111 12456778888887777654 45666654221100 00001222 235789
Q ss_pred eEEEeecCC
Q 048104 163 DFTTIHAYP 171 (316)
Q Consensus 163 D~~t~H~Yp 171 (316)
|++.+..|-
T Consensus 169 D~v~vm~Yd 177 (210)
T cd00598 169 DFVNVMTYD 177 (210)
T ss_pred CEEEEeeec
Confidence 999887774
No 67
>cd02874 GH18_CFLE_spore_hydrolase Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination. CFLE is expressed as an inactive preprotein (called SleB) in the forespore compartment of sporulating cells. SleB translocates across the forespore inner membrane and is deposited as a mature enzyme in the cortex layer of the spore. As part of a sensory mechanism capable of initiating germination, CFLE degrades a spore-specific peptidoglycan constituent called muramic-acid delta-lactam that comprises the outer cortex. CFLE has a C-terminal glycosyl hydrolase family 18 (GH18) catalytic domain as well as two N-terminal LysM peptidoglycan-binding domains. In addition to SleB, this family includes YaaH, YdhD, and YvbX from Bacillus subtilis.
Probab=79.73 E-value=15 Score=34.31 Aligned_cols=96 Identities=13% Similarity=0.240 Sum_probs=64.1
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhcCCCCCCCCCCccCHHHHHHHHHHHHHHHhcccccccccccCC
Q 048104 3 DFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAGASVNSDDDFYTNAIVKGYYKNHVKKVLTRINTITRIAYKDD 82 (316)
Q Consensus 3 D~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~G~~~~~~~~fy~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd~ 82 (316)
-.++..|+++|+|+++.+.+ |.. |+... .....+..|++.|+.+.+-+..++.+ |+=|
T Consensus 48 ~~~~~~a~~~~~kv~~~i~~-~~~-~~~~~------------~~~~~~l~~~~~r~~fi~~iv~~l~~--------~~~D 105 (313)
T cd02874 48 ERLIEAAKRRGVKPLLVITN-LTN-GNFDS------------ELAHAVLSNPEARQRLINNILALAKK--------YGYD 105 (313)
T ss_pred HHHHHHHHHCCCeEEEEEec-CCC-CCCCH------------HHHHHHhcCHHHHHHHHHHHHHHHHH--------hCCC
Confidence 35788999999999998864 321 22110 01124567899999999988888888 6666
Q ss_pred CcEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCeEEEc
Q 048104 83 PTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLLEIG 128 (316)
Q Consensus 83 PaI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt~G 128 (316)
---+-||-. .. ...+.+..+++++...+++. +-++++.
T Consensus 106 GidiDwE~~---~~---~d~~~~~~fl~~lr~~l~~~--~~~lsv~ 143 (313)
T cd02874 106 GVNIDFENV---PP---EDREAYTQFLRELSDRLHPA--GYTLSTA 143 (313)
T ss_pred cEEEecccC---CH---HHHHHHHHHHHHHHHHhhhc--CcEEEEE
Confidence 555667532 11 13467889999999999863 3355543
No 68
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6
Probab=79.37 E-value=4.8 Score=33.17 Aligned_cols=66 Identities=11% Similarity=0.203 Sum_probs=42.6
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHh--cCCCC-----CC---CCCCccCHHHHHHHHHHHHHHHhc
Q 048104 3 DFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARA--AGASV-----NS---DDDFYTNAIVKGYYKNHVKKVLTR 70 (316)
Q Consensus 3 D~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~--~G~~~-----~~---~~~fy~d~~~~~~~~~~v~~vv~R 70 (316)
=.+|++|+++||+|+.-+.-.|+..= ..+.++|..- .|.+. .. ..-.+++ .+++.....+++|++|
T Consensus 47 ge~v~a~h~~Girv~ay~~~~~d~~~-~~~HPeW~~~~~~G~~~~~~~~~~~~~~~~c~ns-~Y~e~~~~~i~Ei~~~ 122 (132)
T PF14871_consen 47 GEQVEACHERGIRVPAYFDFSWDEDA-AERHPEWFVRDADGRPMRGERFGYPGWYTCCLNS-PYREFLLEQIREILDR 122 (132)
T ss_pred HHHHHHHHHCCCEEEEEEeeecChHH-HHhCCceeeECCCCCCcCCCCcCCCCceecCCCc-cHHHHHHHHHHHHHHc
Confidence 45899999999999998876564321 2345667532 23311 11 1123343 5778999999999999
No 69
>TIGR02456 treS_nterm trehalose synthase. Trehalose synthase interconverts maltose and alpha, alpha-trehalose by transglucosylation. This is one of at least three mechanisms for biosynthesis of trehalose, an important and widespread compatible solute. However, it is not driven by phosphate activation of sugars and its physiological role may tend toward trehalose degradation. This view is accentuated by numerous examples of fusion to a probable maltokinase domain. The sequence region described by this model is found both as the whole of a trehalose synthase and as the N-terminal region of a larger fusion protein that includes trehalose synthase activity. Several of these fused trehalose synthases have a domain homologous to proteins with maltokinase activity from Actinoplanes missouriensis and Streptomyces coelicolor (PubMed:15378530).
Probab=78.76 E-value=21 Score=36.34 Aligned_cols=66 Identities=15% Similarity=0.249 Sum_probs=37.8
Q ss_pred ccCHHHHHHHHHHHHHHHhcccccccccccCCCcEEEEeecCC-CCCCCCCChHHHHHHHHHHHHHHHhcCCCCeE
Q 048104 51 YTNAIVKGYYKNHVKKVLTRINTITRIAYKDDPTIMAWELINE-PRCQADYSGKTLNNWVQEMASYVKSIDNKHLL 125 (316)
Q Consensus 51 y~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd~PaI~aWeL~NE-P~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlV 125 (316)
|++|++++...+.++..++. -+.|.++---+.|. . +. +.|.. .+....+++++...||+..|+..+
T Consensus 170 ~~np~vr~~l~~~~~~w~~~--GvDGfRlDav~~~~--~--~~~~~~~~---~p~~~~f~~~~~~~v~~~~p~~~~ 236 (539)
T TIGR02456 170 YDNPAVHDAVHDVMRFWLDL--GVDGFRLDAVPYLY--E--REGTSCEN---LPETHEFLKRLRKMVDREYPGRML 236 (539)
T ss_pred CCCHHHHHHHHHHHHHHHHc--CCCEEEEecHHhhh--c--cCCCccCC---CchHHHHHHHHHHHHHHhCCCeEE
Confidence 67899999998888888863 23333322211110 0 00 01111 122346788889999998887543
No 70
>PRK10933 trehalose-6-phosphate hydrolase; Provisional
Probab=78.24 E-value=26 Score=35.85 Aligned_cols=21 Identities=33% Similarity=0.574 Sum_probs=19.1
Q ss_pred HHHHHHHHHHCCCeEEEeCCC
Q 048104 2 LDFVTSEARKYGIRLILSLSN 22 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n 22 (316)
|+.+|++|+++||+||+++.-
T Consensus 83 ~~~lv~~~h~~gi~vilD~V~ 103 (551)
T PRK10933 83 FDELVAQAKSRGIRIILDMVF 103 (551)
T ss_pred HHHHHHHHHHCCCEEEEEECC
Confidence 688999999999999999863
No 71
>PRK14706 glycogen branching enzyme; Provisional
Probab=78.14 E-value=24 Score=36.89 Aligned_cols=118 Identities=13% Similarity=0.169 Sum_probs=64.9
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCC--------CCCchhh--hHHHHhcCCC--CCCCCCCccCHHHHHHHHHHHHHHHh
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHD--------FGGRPQY--VNWARAAGAS--VNSDDDFYTNAIVKGYYKNHVKKVLT 69 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~--------~Gg~~~y--~~w~~~~G~~--~~~~~~fy~d~~~~~~~~~~v~~vv~ 69 (316)
|-.+|++|+++||+|||++.-+.-. +.|.+.| .++. .|.. ..+...=|.++++++.....++.-++
T Consensus 219 ~~~lv~~~H~~gi~VilD~v~nH~~~~~~~l~~~dg~~~y~~~~~~--~g~~~~w~~~~~~~~~~eVr~~l~~~~~~W~~ 296 (639)
T PRK14706 219 FKYLVNHLHGLGIGVILDWVPGHFPTDESGLAHFDGGPLYEYADPR--KGYHYDWNTYIFDYGRNEVVMFLIGSALKWLQ 296 (639)
T ss_pred HHHHHHHHHHCCCEEEEEecccccCcchhhhhccCCCcceeccCCc--CCcCCCCCCcccCCCCHHHHHHHHHHHHHHHH
Confidence 6789999999999999997533210 1111111 1100 0100 00111114689999999999888887
Q ss_pred cccccccccccCCCcEEEEe------ecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCeE
Q 048104 70 RINTITRIAYKDDPTIMAWE------LINEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLL 125 (316)
Q Consensus 70 R~N~~tg~~ykd~PaI~aWe------L~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlV 125 (316)
.. .+-|.++-.-..++-++ +.|+.... .......+++++...||+..|+.++
T Consensus 297 e~-~iDG~R~Dav~~~ly~d~~~~~~~~~~~gg~---~n~~a~~fl~~ln~~v~~~~p~~~~ 354 (639)
T PRK14706 297 DF-HVDGLRVDAVASMLYLDFSRTEWVPNIHGGR---ENLEAIAFLKRLNEVTHHMAPGCMM 354 (639)
T ss_pred Hh-CCCeEEEeeehheeecccCcccccccccCCc---ccHHHHHHHHHHHHHHHHhCCCeEE
Confidence 51 12233222223333222 33332221 1234567899999999999998543
No 72
>smart00812 Alpha_L_fucos Alpha-L-fucosidase. O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site PUBMED:. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis.
Probab=74.51 E-value=23 Score=34.59 Aligned_cols=93 Identities=18% Similarity=0.247 Sum_probs=55.7
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhcCCCCCCCCCCccCHHHHHHH---HHHHHHHHhcccccccccc
Q 048104 3 DFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAGASVNSDDDFYTNAIVKGYY---KNHVKKVLTRINTITRIAY 79 (316)
Q Consensus 3 D~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~G~~~~~~~~fy~d~~~~~~~---~~~v~~vv~R~N~~tg~~y 79 (316)
-.+.++|+|+||++-+.+.- |++.- +.|..-. . ...+-.+.+..++.+ ...+++|+++ |
T Consensus 131 ~el~~A~rk~Glk~G~Y~S~-~DW~~--p~y~~~~---~----~~~~~~~~~~~~~y~~~~~~Ql~ELit~--------Y 192 (384)
T smart00812 131 GELADAVRKRGLKFGLYHSL-FDWFN--PLYAGPT---S----SDEDPDNWPRFQEFVDDWLPQLRELVTR--------Y 192 (384)
T ss_pred HHHHHHHHHcCCeEEEEcCH-HHhCC--Ccccccc---c----cccccccchhHHHHHHHHHHHHHHHHhc--------C
Confidence 35789999999999997653 22211 1121000 0 001112233344444 8999999999 9
Q ss_pred cCCCcEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCC
Q 048104 80 KDDPTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDNKH 123 (316)
Q Consensus 80 kd~PaI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~h 123 (316)
+. .|+=+|...+-. ... --..++.+.||++-|+.
T Consensus 193 gp--d~lWfD~~~~~~------~~~--~~~~~l~~~~~~~qP~~ 226 (384)
T smart00812 193 KP--DLLWFDGGWEAP------DDY--WRSKEFLAWLYNLSPVK 226 (384)
T ss_pred CC--ceEEEeCCCCCc------cch--hcHHHHHHHHHHhCCCC
Confidence 75 677777654311 111 12578999999999987
No 73
>KOG4701 consensus Chitinase [Cell wall/membrane/envelope biogenesis]
Probab=74.01 E-value=92 Score=30.45 Aligned_cols=193 Identities=15% Similarity=0.229 Sum_probs=88.7
Q ss_pred HHHHHHHCCCeEEEeCCCCCCCCCCc-hhhhHHHHhcCCCCCCCCCCccCHHHHHHHHHHHHHHHhcccccccccccCCC
Q 048104 5 VTSEARKYGIRLILSLSNNYHDFGGR-PQYVNWARAAGASVNSDDDFYTNAIVKGYYKNHVKKVLTRINTITRIAYKDDP 83 (316)
Q Consensus 5 ~l~~A~k~gi~vil~L~n~w~~~Gg~-~~y~~w~~~~G~~~~~~~~fy~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd~P 83 (316)
=|.-|+.+||||+|.| ||. ..|. |=+|.++...-...|..+..-. -.-|++.+ -
T Consensus 95 di~~CQS~GiKVlLSL-------GG~~GnYs---------------~~~d~dA~~fA~~LWn~Fg~G~--~S~RPfg~-A 149 (568)
T KOG4701|consen 95 DIQVCQSNGIKVLLSL-------GGYNGNYS---------------LNNDDDATNFAFQLWNIFGSGE--DSYRPFGK-A 149 (568)
T ss_pred HHHHHHhcCeEEEEec-------cCccccee---------------eccchhHHHHHHHHHHHhcCCc--cccCcccc-h
Confidence 3678999999999988 432 2221 2234444444444555555432 11223322 2
Q ss_pred cEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHH---hcCCCCeEEEcccCccCCCCCCcCCCCCCCCcccchhhccCCC
Q 048104 84 TIMAWELINEPRCQADYSGKTLNNWVQEMASYVK---SIDNKHLLEIGLEGFYGDSIPDKKQFNPGYQVGTDFISNNMIK 160 (316)
Q Consensus 84 aI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Ik---s~Dp~hlVt~G~eG~~~~~~~~~~~~np~~~~g~d~~~~~~~~ 160 (316)
.|-++|.-=|-... ..+ ..+|+.+| +.||++.-..|.. .|..|+. ..| ..+.-.
T Consensus 150 VvDGfDF~IE~g~~-----~~y----saLA~~L~~~Fa~~~r~yYLsaAP---QCP~PD~-------~~G----~aL~~~ 206 (568)
T KOG4701|consen 150 VVDGFDFEIEKGTN-----TAY----SALAKRLLEIFASDPRRYYLSAAP---QCPVPDH-------TLG----KALSEN 206 (568)
T ss_pred hccceeeeeecCCc-----chH----HHHHHHHHHHHccCCceEEeccCC---CCCCCch-------hhh----hhhhcc
Confidence 33333332222111 112 23344343 4577777665532 2222211 111 123346
Q ss_pred CceEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhhcCCCcEEEEcccCCcC-CCCC-CHHHHHHHHHHHHHHHHH
Q 048104 161 EIDFTTIHAYPDQWLPGKNYYAQMQFVQKWLESHWTDSKTILKKPLVFSEFGKSCK-EAGF-SINVRDSFLNTIYMNIYN 238 (316)
Q Consensus 161 ~iD~~t~H~Yp~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~KPvvi~EfG~~~~-~~g~-~~~~r~~~~~~v~~~~~~ 238 (316)
.+||+.+.+|-...-.... -.....+..|+.-....+.+ -+--++++==|.... +.|| +. +...++++..+
T Consensus 207 ~fDf~~IQFYNN~~CS~Ss-G~~Q~~fDsW~~ya~~~a~n-Kn~~lFLGLPg~~~AAGSGYIsp---~~Lt~~~l~~~-- 279 (568)
T KOG4701|consen 207 SFDFLSIQFYNNSTCSGSS-GSRQSTFDAWVEYAEDSAYN-KNTSLFLGLPGHQNAAGSGYISP---KNLTRDLLNYK-- 279 (568)
T ss_pred ccceEEEEeecCCCccccc-CcccccHHHHHHHHhhhccc-ccceEEeeccCCcccccCCccCc---hHHHHHHHHhh--
Confidence 7999999999653211000 00122345565433333322 233567665554433 2344 21 23334444332
Q ss_pred HHHcCCceeeeeeecc
Q 048104 239 LARNGGAIGGGMVWQL 254 (316)
Q Consensus 239 ~~~~~~~~~G~~~W~~ 254 (316)
++.....|.+.|.-
T Consensus 280 --a~S~~fGGv~LWd~ 293 (568)
T KOG4701|consen 280 --ANSTLFGGVTLWDT 293 (568)
T ss_pred --hhccccccEEEeec
Confidence 22334678999975
No 74
>PRK14705 glycogen branching enzyme; Provisional
Probab=73.87 E-value=26 Score=39.31 Aligned_cols=123 Identities=15% Similarity=0.220 Sum_probs=65.2
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCC--------CCCCchhhhHHHHhcCCCC-CCCCCC-ccCHHHHHHHHHHHHHHHhcc
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYH--------DFGGRPQYVNWARAAGASV-NSDDDF-YTNAIVKGYYKNHVKKVLTRI 71 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~--------~~Gg~~~y~~w~~~~G~~~-~~~~~f-y~d~~~~~~~~~~v~~vv~R~ 71 (316)
|-++|++|+++||+|||++.-|.- .+.|..-|-.-....|... -....| |.++++++...+.++..++..
T Consensus 817 fk~lVd~~H~~GI~VILD~V~nH~~~d~~~l~~fdg~~~y~~~d~~~g~~~~Wg~~~fn~~~~eVr~fli~~a~~Wl~ey 896 (1224)
T PRK14705 817 FRFLVDSLHQAGIGVLLDWVPAHFPKDSWALAQFDGQPLYEHADPALGEHPDWGTLIFDFGRTEVRNFLVANALYWLDEF 896 (1224)
T ss_pred HHHHHHHHHHCCCEEEEEeccccCCcchhhhhhcCCCcccccCCcccCCCCCCCCceecCCCHHHHHHHHHHHHHHHHHh
Confidence 678999999999999999764321 0111111100000000000 001122 678999999999999999871
Q ss_pred cccccccccCCCcEEEEeecC-----CCCCCCCCChHHHHHHHHHHHHHHHhcCCCCeE
Q 048104 72 NTITRIAYKDDPTIMAWELIN-----EPRCQADYSGKTLNNWVQEMASYVKSIDNKHLL 125 (316)
Q Consensus 72 N~~tg~~ykd~PaI~aWeL~N-----EP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlV 125 (316)
.+.|.++---..++-.+-.- .|+..+.........+++++.+.|++..|+.++
T Consensus 897 -hiDGfR~Dav~~mly~Dysr~~g~w~pn~~gg~en~~ai~fl~~ln~~v~~~~p~~~~ 954 (1224)
T PRK14705 897 -HIDGLRVDAVASMLYLDYSREEGQWRPNRFGGRENLEAISFLQEVNATVYKTHPGAVM 954 (1224)
T ss_pred -CCCcEEEeehhhhhhcccccccccccccccCCccChHHHHHHHHHHHHHHHHCCCeEE
Confidence 12222221112332222221 222222111234568999999999999997543
No 75
>PLN02447 1,4-alpha-glucan-branching enzyme
Probab=72.33 E-value=38 Score=36.12 Aligned_cols=124 Identities=10% Similarity=0.159 Sum_probs=65.7
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCC---CCchhh----hHHHHh--cCCC-CCCCCCC-ccCHHHHHHHHHHHHHHHhc
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHDF---GGRPQY----VNWARA--AGAS-VNSDDDF-YTNAIVKGYYKNHVKKVLTR 70 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~~---Gg~~~y----~~w~~~--~G~~-~~~~~~f-y~d~~~~~~~~~~v~~vv~R 70 (316)
|-++|++|+++||+|||++.-+.... .|...| ..|... .|.. .-....| |.++++++.....++..++.
T Consensus 302 lk~LVd~aH~~GI~VilDvV~nH~~~~~~~gl~~fDg~~~~Yf~~~~~g~~~~w~~~~~N~~~~eVr~fLl~~~~~Wl~e 381 (758)
T PLN02447 302 LKYLIDKAHSLGLRVLMDVVHSHASKNTLDGLNGFDGTDGSYFHSGPRGYHWLWDSRLFNYGNWEVLRFLLSNLRWWLEE 381 (758)
T ss_pred HHHHHHHHHHCCCEEEEEeccccccccccccccccCCCCccccccCCCCCcCcCCCceecCCCHHHHHHHHHHHHHHHHH
Confidence 66899999999999999986432110 011000 011111 0100 0001112 67889999999999998885
Q ss_pred ccccccccccCCCcEEEEe------ec-CCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCeEE
Q 048104 71 INTITRIAYKDDPTIMAWE------LI-NEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLLE 126 (316)
Q Consensus 71 ~N~~tg~~ykd~PaI~aWe------L~-NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt 126 (316)
. .+-|.++-.-..++-.+ .. |.....+.........++.++...|+++.|+.++.
T Consensus 382 y-~IDGfRfDaV~smlY~~hg~~~~f~~~~~~~~g~~~d~~a~~fL~~~N~~i~~~~p~~~~I 443 (758)
T PLN02447 382 Y-KFDGFRFDGVTSMLYHHHGLQMAFTGNYNEYFGMATDVDAVVYLMLANDLLHGLYPEAVTI 443 (758)
T ss_pred h-CcccccccchhhhhccccCcccccccCcccccCCccChHHHHHHHHHHHHHHHhCCCeEEE
Confidence 1 12333333233333222 11 11111111112345678899999999999986543
No 76
>smart00642 Aamy Alpha-amylase domain.
Probab=72.06 E-value=3.7 Score=35.08 Aligned_cols=22 Identities=27% Similarity=0.412 Sum_probs=19.5
Q ss_pred HHHHHHHHHHCCCeEEEeCCCC
Q 048104 2 LDFVTSEARKYGIRLILSLSNN 23 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~ 23 (316)
|..++++|+++||+||+++.=|
T Consensus 72 ~~~lv~~~h~~Gi~vilD~V~N 93 (166)
T smart00642 72 FKELVDAAHARGIKVILDVVIN 93 (166)
T ss_pred HHHHHHHHHHCCCEEEEEECCC
Confidence 6789999999999999998643
No 77
>cd02872 GH18_chitolectin_chitotriosidase This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active chitotriosidases. The conserved domain is an eight-stranded alpha/beta barrel fold belonging to the family 18 glycosyl hydrolases. The fold has a pronounced active-site cleft at the C-terminal end of the beta-barrel. The chitolectins lack a key active site glutamate (the proton donor required for hydrolytic activity) but retain highly conserved residues involved in oligosaccharide binding. Chitotriosidase is a chitinolytic enzyme expressed in maturing macrophages, which suggests that it plays a part in antimicrobial defense. Chitotriosidase hydrolyzes chitotriose, as well as colloidal chitin to yield chitobiose and is therefore considered an exochitinase. Chitotriosidase occurs in two major forms, the la
Probab=71.34 E-value=35 Score=32.55 Aligned_cols=71 Identities=11% Similarity=0.160 Sum_probs=49.7
Q ss_pred CccCHHHHHHHHHHHHHHHhcccccccccccCCCcEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCeEEEcc
Q 048104 50 FYTNAIVKGYYKNHVKKVLTRINTITRIAYKDDPTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLLEIGL 129 (316)
Q Consensus 50 fy~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd~PaI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt~G~ 129 (316)
+..+++.++.|.+-+..++++ |+=|--.+-||--+-.. ......+.+..+++++.+.+++..++-+||+..
T Consensus 90 ~~~~~~~r~~fi~~iv~~l~~--------~~~DGidiDwE~p~~~~-~~~~d~~~~~~ll~~lr~~l~~~~~~~~ls~av 160 (362)
T cd02872 90 MAASPENRKTFIKSAIAFLRK--------YGFDGLDLDWEYPGQRG-GPPEDKENFVTLLKELREAFEPEAPRLLLTAAV 160 (362)
T ss_pred HhCCHHHHHHHHHHHHHHHHH--------cCCCCeeeeeeccccCC-CCHHHHHHHHHHHHHHHHHHHhhCcCeEEEEEe
Confidence 456888899888888888888 66565567787543211 111124578899999999999877777777654
No 78
>PRK12568 glycogen branching enzyme; Provisional
Probab=69.96 E-value=32 Score=36.45 Aligned_cols=124 Identities=11% Similarity=0.139 Sum_probs=66.1
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCC--------CCCCchhhhHHHHhcCCCC-CCCCCC-ccCHHHHHHHHHHHHHHHhcc
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYH--------DFGGRPQYVNWARAAGASV-NSDDDF-YTNAIVKGYYKNHVKKVLTRI 71 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~--------~~Gg~~~y~~w~~~~G~~~-~~~~~f-y~d~~~~~~~~~~v~~vv~R~ 71 (316)
|-.+|++|+++||+|||++.-+.- .+.|...|.......|... -....| |.+|++++...+.++.-++.
T Consensus 321 fk~lV~~~H~~Gi~VIlD~V~nH~~~d~~~l~~fdg~~~Ye~~d~~~g~~~~W~~~~~N~~~peVr~~li~~a~~Wl~e- 399 (730)
T PRK12568 321 FAQFVDACHRAGIGVILDWVSAHFPDDAHGLAQFDGAALYEHADPREGMHRDWNTLIYNYGRPEVTAYLLGSALEWIEH- 399 (730)
T ss_pred HHHHHHHHHHCCCEEEEEeccccCCccccccccCCCccccccCCCcCCccCCCCCeecccCCHHHHHHHHHHHHHHHHH-
Confidence 668999999999999999864321 1112111210000001000 001122 67899999999988888876
Q ss_pred cccccccccCCCcEEEEeecCC-----CCCCCCCChHHHHHHHHHHHHHHHhcCCCCeEE
Q 048104 72 NTITRIAYKDDPTIMAWELINE-----PRCQADYSGKTLNNWVQEMASYVKSIDNKHLLE 126 (316)
Q Consensus 72 N~~tg~~ykd~PaI~aWeL~NE-----P~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt 126 (316)
=.+.|.++-.-..++..+-.-+ |+..+....-....+++++...||+..|+.++.
T Consensus 400 yhIDG~R~DAva~mly~d~~r~~g~w~pn~~gg~en~ea~~Fl~~ln~~v~~~~P~~~~I 459 (730)
T PRK12568 400 YHLDGLRVDAVASMLYRDYGRAEGEWVPNAHGGRENLEAVAFLRQLNREIASQFPGVLTI 459 (730)
T ss_pred hCceEEEEcCHhHhhhhccccccccccccccCCccChHHHHHHHHHHHHHHHHCCCeEEE
Confidence 1233333222233333332111 111111111235689999999999999986443
No 79
>smart00636 Glyco_18 Glycosyl hydrolase family 18.
Probab=69.24 E-value=36 Score=31.95 Aligned_cols=96 Identities=14% Similarity=0.285 Sum_probs=60.7
Q ss_pred HHHHHHHHC-CCeEEEeCCCCCCCCCCchhhhHHHHhcCCCCCCCCCCccCHHHHHHHHHHHHHHHhcccccccccccCC
Q 048104 4 FVTSEARKY-GIRLILSLSNNYHDFGGRPQYVNWARAAGASVNSDDDFYTNAIVKGYYKNHVKKVLTRINTITRIAYKDD 82 (316)
Q Consensus 4 ~~l~~A~k~-gi~vil~L~n~w~~~Gg~~~y~~w~~~~G~~~~~~~~fy~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd~ 82 (316)
.+.+.++++ ++|+++.+.. |... . .-...-.+++.++.|.+.+..++.+ |+=|
T Consensus 56 ~~~~l~~~~~~~kvl~svgg-~~~s---~--------------~f~~~~~~~~~r~~fi~~i~~~~~~--------~~~D 109 (334)
T smart00636 56 QLKALKKKNPGLKVLLSIGG-WTES---D--------------NFSSMLSDPASRKKFIDSIVSFLKK--------YGFD 109 (334)
T ss_pred HHHHHHHhCCCCEEEEEEeC-CCCC---c--------------chhHHHCCHHHHHHHHHHHHHHHHH--------cCCC
Confidence 345555554 9999998732 1110 0 0123456888999998888888888 5544
Q ss_pred CcEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhc---CCCCeEEEcc
Q 048104 83 PTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSI---DNKHLLEIGL 129 (316)
Q Consensus 83 PaI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks~---Dp~hlVt~G~ 129 (316)
---+-||-. .... ...+.+..+++++...+++. .++.+||+..
T Consensus 110 GidiDwE~~---~~~~-~d~~~~~~ll~~lr~~l~~~~~~~~~~~lsi~v 155 (334)
T smart00636 110 GIDIDWEYP---GARG-DDRENYTALLKELREALDKEGAEGKGYLLTIAV 155 (334)
T ss_pred eEEECCcCC---CCCc-cHHHHHHHHHHHHHHHHHHhcccCCceEEEEEe
Confidence 444555532 2211 12457889999999988876 5677777754
No 80
>cd02871 GH18_chitinase_D-like GH18 domain of Chitinase D (ChiD). ChiD, a chitinase found in Bacillus circulans, hydrolyzes the 1,4-beta-linkages of N-acetylglucosamine in chitin and chitodextrins. The domain architecture of ChiD includes a catalytic glycosyl hydrolase family 18 (GH18) domain, a chitin-binding domain, and a fibronectin type III domain. The chitin-binding and fibronectin type III domains are located either N-terminal or C-terminal to the catalytic domain. This family includes exochitinase Chi36 from Bacillus cereus.
Probab=68.93 E-value=88 Score=29.34 Aligned_cols=90 Identities=12% Similarity=0.192 Sum_probs=50.5
Q ss_pred HHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhcCCCCCCCCCCccCHHHHHHHHHHHHHHHhcccccccccccCCC
Q 048104 4 FVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAGASVNSDDDFYTNAIVKGYYKNHVKKVLTRINTITRIAYKDDP 83 (316)
Q Consensus 4 ~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~G~~~~~~~~fy~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd~P 83 (316)
.-|..++++|+||+|++ ||.. + .....+++.++.|.+.+..++.. |.=|
T Consensus 64 ~~i~~~q~~G~KVllSi-------GG~~---------~------~~~~~~~~~~~~fa~sl~~~~~~--------~g~D- 112 (312)
T cd02871 64 ADIKALQAKGKKVLISI-------GGAN---------G------HVDLNHTAQEDNFVDSIVAIIKE--------YGFD- 112 (312)
T ss_pred HHHHHHHHCCCEEEEEE-------eCCC---------C------ccccCCHHHHHHHHHHHHHHHHH--------hCCC-
Confidence 45678999999999987 4431 1 01145677778888877787776 5422
Q ss_pred cEEEEeecCCCCCCCCC---ChHHHHHHHHHHHHHHHhcCCCCeEEEccc
Q 048104 84 TIMAWELINEPRCQADY---SGKTLNNWVQEMASYVKSIDNKHLLEIGLE 130 (316)
Q Consensus 84 aI~aWeL~NEP~~~~~~---~~~~~~~w~~e~a~~Iks~Dp~hlVt~G~e 130 (316)
+.||-=|....... ..+.+...++++.. .++++-++|+.-+
T Consensus 113 ---GiDiD~E~~~~~~~~~~~~~~~~~~lk~lr~---~~~~~~~lT~AP~ 156 (312)
T cd02871 113 ---GLDIDLESGSNPLNATPVITNLISALKQLKD---HYGPNFILTMAPE 156 (312)
T ss_pred ---eEEEecccCCccCCcHHHHHHHHHHHHHHHH---HcCCCeEEEECCC
Confidence 44555553221111 11233344444333 3455667777644
No 81
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=65.92 E-value=44 Score=31.29 Aligned_cols=109 Identities=14% Similarity=0.105 Sum_probs=63.9
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhcCC------CC--CCCCCCccCHHHHHHHHHHHHHHHhcccc
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAGA------SV--NSDDDFYTNAIVKGYYKNHVKKVLTRINT 73 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~G~------~~--~~~~~fy~d~~~~~~~~~~v~~vv~R~N~ 73 (316)
+..+++-|++|||.||+-+ +.+|.+.....+...-+. .. ....--.++|+..+..++.+++++.-
T Consensus 74 i~elv~yA~~rgI~viPEi----D~PGH~~a~~~~~p~l~~~~~~~~~~~~~~~~l~~~~~~t~~fl~~l~~e~~~l--- 146 (303)
T cd02742 74 LKDIIEYAAARGIEVIPEI----DMPGHSTAFVKSFPKLLTECYAGLKLRDVFDPLDPTLPKGYDFLDDLFGEIAEL--- 146 (303)
T ss_pred HHHHHHHHHHcCCEEEEec----cchHHHHHHHHhCHHhccCccccCCCCCCCCccCCCCccHHHHHHHHHHHHHHh---
Confidence 4578999999999999977 245655433322211110 00 01122357889999999999999986
Q ss_pred cccccccCCCcEEEEeec-CCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCeEEEc
Q 048104 74 ITRIAYKDDPTIMAWELI-NEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLLEIG 128 (316)
Q Consensus 74 ~tg~~ykd~PaI~aWeL~-NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt~G 128 (316)
+. .|.| -|+ -|..... ...+.+..+++++++.||+.. ..++.-+
T Consensus 147 -----f~-~~~i---HiGgDE~~~~~-~~~~l~~~f~~~~~~~v~~~g-~~~~~W~ 191 (303)
T cd02742 147 -----FP-DRYL---HIGGDEAHFKQ-DRKHLMSQFIQRVLDIVKKKG-KKVIVWQ 191 (303)
T ss_pred -----CC-CCeE---EecceecCCCC-CHHHHHHHHHHHHHHHHHHcC-CeEEEec
Confidence 42 2221 111 1111001 123457888999999999876 4455443
No 82
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=65.53 E-value=5.6 Score=36.14 Aligned_cols=55 Identities=20% Similarity=0.210 Sum_probs=35.0
Q ss_pred ccCHHHHHHHHHHHHHHHhcccccccccccCCCcEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCeEE
Q 048104 51 YTNAIVKGYYKNHVKKVLTRINTITRIAYKDDPTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLLE 126 (316)
Q Consensus 51 y~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd~PaI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt 126 (316)
+.+|.+++.+.+.++..+++ + |=++-+-.=. -....+++++...|++..|+.++.
T Consensus 141 ~~n~~v~~~i~~~~~~w~~~--------g-----iDGfR~D~~~--------~~~~~~~~~~~~~~~~~~~~~~~i 195 (316)
T PF00128_consen 141 YENPEVREYIIDVLKFWIEE--------G-----IDGFRLDAAK--------HIPKEFWKEFRDEVKEEKPDFFLI 195 (316)
T ss_dssp TTSHHHHHHHHHHHHHHHHT--------T-----ESEEEETTGG--------GSSHHHHHHHHHHHHHHHTTSEEE
T ss_pred hhhhhhhhhhcccccchhhc--------e-----EeEEEEcccc--------ccchhhHHHHhhhhhhhcccccee
Confidence 67889999999999888887 2 3333221111 112266777777778777776654
No 83
>PLN02705 beta-amylase
Probab=64.90 E-value=15 Score=37.82 Aligned_cols=81 Identities=19% Similarity=0.400 Sum_probs=50.4
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCCCch------hhhHHHHhcCCCCCCCCCCccCH---------------------
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHDFGGRP------QYVNWARAAGASVNSDDDFYTNA--------------------- 54 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~~Gg~~------~y~~w~~~~G~~~~~~~~fy~d~--------------------- 54 (316)
...+++.+++.||||...| .++.+||.- .-++|....|.. ..+-||+|.
T Consensus 307 Y~~L~~mvr~~GLKlqvVm--SFHqCGGNVGD~~~IPLP~WV~e~g~~--nPDifftDr~G~rn~EyLSlg~D~~pvl~G 382 (681)
T PLN02705 307 YRELFNIIREFKLKLQVVM--AFHEYGGNASGNVMISLPQWVLEIGKD--NQDIFFTDREGRRNTECLSWSIDKERVLKG 382 (681)
T ss_pred HHHHHHHHHHcCCeEEEEE--EeeccCCCCCCcccccCCHHHHHhccc--CCCceeecCCCCcccceeeeecCcccccCC
Confidence 4578999999999987666 234456531 145677654431 233455543
Q ss_pred -HHHHHHHHHHHHHHhcccccccccccC---CCcEEEEeecCCC
Q 048104 55 -IVKGYYKNHVKKVLTRINTITRIAYKD---DPTIMAWELINEP 94 (316)
Q Consensus 55 -~~~~~~~~~v~~vv~R~N~~tg~~ykd---~PaI~aWeL~NEP 94 (316)
+..+.|.++++.+-.. |.+ +.+|..-+|+==|
T Consensus 383 RTplq~Y~DFM~SFr~~--------F~~fl~~g~I~eI~VGLGP 418 (681)
T PLN02705 383 RTGIEVYFDFMRSFRSE--------FDDLFVEGLITAVEIGLGA 418 (681)
T ss_pred CCHHHHHHHHHHHHHHH--------HHHhccCCceeEEEeccCC
Confidence 3457888888888777 444 4566666665433
No 84
>PLN02960 alpha-amylase
Probab=64.88 E-value=79 Score=34.31 Aligned_cols=121 Identities=11% Similarity=0.148 Sum_probs=68.0
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCC---------CCCCch-hhhHHHHhcCCC-CCCCCCC-ccCHHHHHHHHHHHHHHHh
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYH---------DFGGRP-QYVNWARAAGAS-VNSDDDF-YTNAIVKGYYKNHVKKVLT 69 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~---------~~Gg~~-~y~~w~~~~G~~-~~~~~~f-y~d~~~~~~~~~~v~~vv~ 69 (316)
|..+|++|+++||+|||++.-+.- .+.|.. .|-. ....|.. .-....| |.++.+++.....++..+.
T Consensus 468 fk~LVd~aH~~GI~VILDvV~NH~~~d~~~~L~~FDG~~~~Yf~-~~~~g~~~~WG~~~fNy~~~eVr~fLlsna~yWl~ 546 (897)
T PLN02960 468 FKRLVDEAHGLGLLVFLDIVHSYAAADEMVGLSLFDGSNDCYFH-SGKRGHHKRWGTRMFKYGDHEVLHFLLSNLNWWVT 546 (897)
T ss_pred HHHHHHHHHHCCCEEEEEecccccCCccccchhhcCCCccceee-cCCCCccCCCCCcccCCCCHHHHHHHHHHHHHHHH
Confidence 678999999999999999853221 122211 0100 0000100 0001122 6789999999999999887
Q ss_pred cccccccccccCCCcEEEEee--cCCC-------CCCCCCChHHHHHHHHHHHHHHHhcCCCCeEEE
Q 048104 70 RINTITRIAYKDDPTIMAWEL--INEP-------RCQADYSGKTLNNWVQEMASYVKSIDNKHLLEI 127 (316)
Q Consensus 70 R~N~~tg~~ykd~PaI~aWeL--~NEP-------~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt~ 127 (316)
. =.+.|.++-.-.+++-.+- .+++ +... ......+++++...|++..|+.++..
T Consensus 547 E-yhIDGfR~DAV~sMlY~d~g~~~~~G~~~~~~n~~~---d~~Ai~fL~~lN~~v~~~~P~vilIA 609 (897)
T PLN02960 547 E-YRVDGFQFHSLGSMLYTHNGFASFTGDLDEYCNQYV---DRDALIYLILANEMLHQLHPNIITIA 609 (897)
T ss_pred H-HCCCceeecccceeeeeccCccccCCcccccCCccC---CchHHHHHHHHHHHHHhhCCCeEEEE
Confidence 5 1233444443345444331 1111 1111 23466889999999999999865544
No 85
>PLN02801 beta-amylase
Probab=63.35 E-value=18 Score=36.41 Aligned_cols=84 Identities=20% Similarity=0.419 Sum_probs=51.2
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCCCch------hhhHHHHhcCCCCCCCCCCccCH---------------------
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHDFGGRP------QYVNWARAAGASVNSDDDFYTNA--------------------- 54 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~~Gg~~------~y~~w~~~~G~~~~~~~~fy~d~--------------------- 54 (316)
-..+++.+++.|||+...| .++.+||.- .-++|....|. ...+-||+|.
T Consensus 76 Y~~l~~mvr~~GLKlq~vm--SFHqCGGNVGD~~~IpLP~WV~~~g~--~~pDi~ftDr~G~rn~EyLSlg~D~~pvl~G 151 (517)
T PLN02801 76 YRSLFELVQSFGLKIQAIM--SFHQCGGNVGDAVNIPIPQWVRDVGD--SDPDIFYTNRSGNRNKEYLSIGVDNLPLFHG 151 (517)
T ss_pred HHHHHHHHHHcCCeEEEEE--EecccCCCCCCcccccCCHHHHHhhc--cCCCceeecCCCCcCcceeeeccCcccccCC
Confidence 4678999999999997666 234566641 13567755443 1223444433
Q ss_pred -HHHHHHHHHHHHHHhcccccccccccCCCcEEEEeecCCC
Q 048104 55 -IVKGYYKNHVKKVLTRINTITRIAYKDDPTIMAWELINEP 94 (316)
Q Consensus 55 -~~~~~~~~~v~~vv~R~N~~tg~~ykd~PaI~aWeL~NEP 94 (316)
+..+.|.++.+.+-..... |.++.+|..-+++=-|
T Consensus 152 RTplq~Y~Dfm~SFr~~F~~-----~l~~~~I~eI~VGlGP 187 (517)
T PLN02801 152 RTAVEMYSDYMKSFRENMAD-----FLEAGVIIDIEVGLGP 187 (517)
T ss_pred CCHHHHHHHHHHHHHHHHHH-----hccCCeeEEEEEcccc
Confidence 4578899988888777211 2234577777766444
No 86
>cd02878 GH18_zymocin_alpha Zymocin, alpha subunit. Zymocin is a heterotrimeric enzyme that inhibits yeast cell cycle progression. The zymocin alpha subunit has a chitinase activity that is essential for holoenzyme action from the cell exterior while the gamma subunit contains the intracellular toxin responsible for G1 phase cell cycle arrest. The zymocin alpha and beta subunits are thought to act from the cell's exterior by docking to the cell wall-associated chitin, thus mediating gamma-toxin translocation. The alpha subunit has an eight-stranded TIM barrel fold similar to that of family 18 glycosyl hydrolases such as hevamine, chitolectin, and chitobiase.
Probab=62.75 E-value=1.1e+02 Score=29.23 Aligned_cols=65 Identities=20% Similarity=0.326 Sum_probs=43.2
Q ss_pred CHHHHHHHHHHHHHHHhcccccccccccCCCcEEEEeecCCCCC-----CCCCChHHHHHHHHHHHHHHHhcCCCCeEEE
Q 048104 53 NAIVKGYYKNHVKKVLTRINTITRIAYKDDPTIMAWELINEPRC-----QADYSGKTLNNWVQEMASYVKSIDNKHLLEI 127 (316)
Q Consensus 53 d~~~~~~~~~~v~~vv~R~N~~tg~~ykd~PaI~aWeL~NEP~~-----~~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt~ 127 (316)
+++.|+.|.+-+..++.+ |+=|---+-||--+.+.. ......+.+..+++++...+++ +.++|+
T Consensus 88 ~~~~R~~Fi~si~~~~~~--------~~fDGidiDwE~P~~~~~~~~~~~~~~d~~n~~~ll~elr~~l~~---~~~ls~ 156 (345)
T cd02878 88 KPANRDTFANNVVNFVNK--------YNLDGVDFDWEYPGAPDIPGIPAGDPDDGKNYLEFLKLLKSKLPS---GKSLSI 156 (345)
T ss_pred CHHHHHHHHHHHHHHHHH--------cCCCceeecccCCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCc---CcEEEE
Confidence 788999998888888887 554544566775443321 1111246788888998888754 557666
Q ss_pred c
Q 048104 128 G 128 (316)
Q Consensus 128 G 128 (316)
.
T Consensus 157 a 157 (345)
T cd02878 157 A 157 (345)
T ss_pred E
Confidence 4
No 87
>PLN02361 alpha-amylase
Probab=62.68 E-value=23 Score=34.82 Aligned_cols=22 Identities=18% Similarity=0.397 Sum_probs=19.3
Q ss_pred HHHHHHHHHHCCCeEEEeCCCC
Q 048104 2 LDFVTSEARKYGIRLILSLSNN 23 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~ 23 (316)
|..+|++|+++||+||+++.-|
T Consensus 78 l~~li~~~h~~gi~vi~D~V~N 99 (401)
T PLN02361 78 LKSLLRKMKQYNVRAMADIVIN 99 (401)
T ss_pred HHHHHHHHHHcCCEEEEEEccc
Confidence 6789999999999999998643
No 88
>cd06548 GH18_chitinase The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites. The structure of this domain is an eight-stranded alpha/beta barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel.
Probab=62.10 E-value=77 Score=29.77 Aligned_cols=71 Identities=13% Similarity=0.229 Sum_probs=46.2
Q ss_pred ccCHHHHHHHHHHHHHHHhcccccccccccCCCcEEEEeecCCC----CCCCCCChHHHHHHHHHHHHHHHhcC----CC
Q 048104 51 YTNAIVKGYYKNHVKKVLTRINTITRIAYKDDPTIMAWELINEP----RCQADYSGKTLNNWVQEMASYVKSID----NK 122 (316)
Q Consensus 51 y~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd~PaI~aWeL~NEP----~~~~~~~~~~~~~w~~e~a~~Iks~D----p~ 122 (316)
-.+++.++.|.+-+..++.+ |.=|---+-||--.-. ++......+.+..+++++...+++.. ++
T Consensus 104 ~~~~~~r~~Fi~siv~~l~~--------~~fDGidiDwE~p~~~~~~~~~~~~~d~~~~~~ll~~Lr~~l~~~~~~~~~~ 175 (322)
T cd06548 104 AATEASRAKFADSAVDFIRK--------YGFDGIDIDWEYPGSGGAPGNVARPEDKENFTLLLKELREALDALGAETGRK 175 (322)
T ss_pred hCCHHHHHHHHHHHHHHHHh--------cCCCeEEECCcCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHhhhccCCc
Confidence 46888999999888888888 5555445667632211 11111134678889999999998753 45
Q ss_pred CeEEEcc
Q 048104 123 HLLEIGL 129 (316)
Q Consensus 123 hlVt~G~ 129 (316)
-++|+..
T Consensus 176 ~~Ls~av 182 (322)
T cd06548 176 YLLTIAA 182 (322)
T ss_pred eEEEEEc
Confidence 6777643
No 89
>PLN00197 beta-amylase; Provisional
Probab=61.18 E-value=18 Score=36.68 Aligned_cols=81 Identities=17% Similarity=0.338 Sum_probs=50.6
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCCCch------hhhHHHHhcCCCCCCCCCCccCH---------------------
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHDFGGRP------QYVNWARAAGASVNSDDDFYTNA--------------------- 54 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~~Gg~~------~y~~w~~~~G~~~~~~~~fy~d~--------------------- 54 (316)
...+++.+++.|||+...| .++.+||.- .-++|....|. ...+-||+|.
T Consensus 166 Y~~L~~mvr~~GLKlq~Vm--SFHqCGGNVGD~~~IpLP~WV~~~g~--~dpDifftDr~G~rn~EyLSlg~D~~pvl~G 241 (573)
T PLN00197 166 YNELLEMAKRHGLKVQAVM--SFHQCGGNVGDSCTIPLPKWVVEEVD--KDPDLAYTDQWGRRNYEYVSLGCDTLPVLKG 241 (573)
T ss_pred HHHHHHHHHHcCCeEEEEE--EecccCCCCCCcccccCCHHHHHhhc--cCCCceeecCCCCcccceeccccccccccCC
Confidence 4578999999999988776 334566631 14567755443 2234455543
Q ss_pred -HHHHHHHHHHHHHHhcccccccccccC--CCcEEEEeecCCC
Q 048104 55 -IVKGYYKNHVKKVLTRINTITRIAYKD--DPTIMAWELINEP 94 (316)
Q Consensus 55 -~~~~~~~~~v~~vv~R~N~~tg~~ykd--~PaI~aWeL~NEP 94 (316)
+..+.|.++.+.+-.. |.+ ..+|..-+++==|
T Consensus 242 RTpiq~Y~DFM~SFr~~--------F~~~l~~~I~eI~VGlGP 276 (573)
T PLN00197 242 RTPVQCYADFMRAFRDN--------FKHLLGDTIVEIQVGMGP 276 (573)
T ss_pred CCHHHHHHHHHHHHHHH--------HHHHhcCceeEEEeccCc
Confidence 2367888888888877 444 2467766665433
No 90
>PLN02877 alpha-amylase/limit dextrinase
Probab=61.12 E-value=1e+02 Score=33.90 Aligned_cols=117 Identities=16% Similarity=0.237 Sum_probs=63.5
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCCCc-------hhhhH-HH---HhcCCCCCC--CCCC-ccCHHHHHHHHHHHHHH
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHDFGGR-------PQYVN-WA---RAAGASVNS--DDDF-YTNAIVKGYYKNHVKKV 67 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~~Gg~-------~~y~~-w~---~~~G~~~~~--~~~f-y~d~~~~~~~~~~v~~v 67 (316)
|..+|..|+++||+||+++.=|...-+|. +.++. |+ ...|..... .++. -.++-+++...+-++.-
T Consensus 468 fk~mV~~lH~~GI~VImDVVyNHt~~~g~~~~~s~ld~~vP~YY~r~~~~G~~~ns~c~n~~Ase~~mvrklIlDsl~yW 547 (970)
T PLN02877 468 FRKMVQALNRIGLRVVLDVVYNHLHSSGPFDENSVLDKIVPGYYLRRNSDGFIENSTCVNNTASEHYMVDRLIVDDLLNW 547 (970)
T ss_pred HHHHHHHHHHCCCEEEEEECCccccCCCCcchhhcccCCCCCceEEECCCCCcccCCccCCCccCCHHHHHHHHHHHHHH
Confidence 67899999999999999975332211111 11111 11 111110000 0111 12356777888888888
Q ss_pred HhcccccccccccCCCcEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCeEEEcccCc
Q 048104 68 LTRINTITRIAYKDDPTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLLEIGLEGF 132 (316)
Q Consensus 68 v~R~N~~tg~~ykd~PaI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt~G~eG~ 132 (316)
++- |+=|- +=+||+....-.. -..+...++++....+.+|...++..| |||
T Consensus 548 ~~e--------y~VDG--FRFDlmg~i~~~t---m~~~~~~L~~i~~~~~~~dg~~i~lyG-EgW 598 (970)
T PLN02877 548 AVN--------YKVDG--FRFDLMGHLMKRT---MVRAKDALQSLTLERDGVDGSSIYLYG-EGW 598 (970)
T ss_pred HHH--------hCCCE--EEEEccccccHHH---HHHHHHHHHHHhhhhcccCCCceEEEE-eCC
Confidence 876 65442 3467776643221 124555666666666667755566666 787
No 91
>cd02877 GH18_hevamine_XipI_class_III This conserved domain family includes xylanase inhibitor Xip-I, and the class III plant chitinases such as hevamine, concanavalin B, and PPL2, all of which have a glycosyl hydrolase family 18 (GH18) domain. Hevamine is a class III endochitinase that hydrolyzes the linear polysaccharide chains of chitin and peptidoglycan and is important for defense against pathogenic bacteria and fungi. PPL2 (Parkia platycephala lectin 2) is a class III chitinase from Parkia platycephala seeds that hydrolyzes beta(1-4) glycosidic bonds linking 2-acetoamido-2-deoxy-beta-D-glucopyranose units in chitin.
Probab=59.74 E-value=1.5e+02 Score=27.56 Aligned_cols=17 Identities=18% Similarity=0.305 Sum_probs=14.9
Q ss_pred HHHHHHHHCCCeEEEeC
Q 048104 4 FVTSEARKYGIRLILSL 20 (316)
Q Consensus 4 ~~l~~A~k~gi~vil~L 20 (316)
.=|..|++.|+||+|++
T Consensus 63 ~dI~~cq~~G~KVlLSI 79 (280)
T cd02877 63 ADIKHCQSKGKKVLLSI 79 (280)
T ss_pred HHHHHHHHCCCEEEEEc
Confidence 45788999999999987
No 92
>COG0276 HemH Protoheme ferro-lyase (ferrochelatase) [Coenzyme metabolism]
Probab=59.42 E-value=98 Score=29.50 Aligned_cols=107 Identities=17% Similarity=0.325 Sum_probs=68.1
Q ss_pred HHHHHHHHHHCCC--eEEEeCCCCCCCCCCchhhhH-----HHHhcCC-CCCCCCCCccCHHHHHHHHHHHHHHHhcccc
Q 048104 2 LDFVTSEARKYGI--RLILSLSNNYHDFGGRPQYVN-----WARAAGA-SVNSDDDFYTNAIVKGYYKNHVKKVLTRINT 73 (316)
Q Consensus 2 LD~~l~~A~k~gi--~vil~L~n~w~~~Gg~~~y~~-----w~~~~G~-~~~~~~~fy~d~~~~~~~~~~v~~vv~R~N~ 73 (316)
+..+|++.++.|+ =|+++|.-++..+. ...|.+ +....+. .+.....||++|.+.++..+.|+.-++.
T Consensus 104 i~~~v~~l~~~gv~~iv~~pLyPqyS~sT-t~s~~~~~~~al~~~~~~~~i~~I~~~~~~p~yI~a~a~~I~~~~~~--- 179 (320)
T COG0276 104 IEEAVEELKKDGVERIVVLPLYPQYSSST-TGSYVDELARALKELRGQPKISTIPDYYDEPLYIEALADSIREKLAK--- 179 (320)
T ss_pred HHHHHHHHHHcCCCeEEEEECCccccccc-HHHHHHHHHHHHHhcCCCCceEEecCccCChHHHHHHHHHHHHHHHh---
Confidence 4578999999999 45566655443321 112322 1111121 2345679999999999999999888876
Q ss_pred cccccccCCCcEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHh
Q 048104 74 ITRIAYKDDPTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKS 118 (316)
Q Consensus 74 ~tg~~ykd~PaI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks 118 (316)
..-++..+-+.---=|.-..+ .|+.+..++++.+..|++
T Consensus 180 -----~~~~~~~llfSaHglP~~~~~-~GDpY~~q~~~t~~li~e 218 (320)
T COG0276 180 -----HPRDDDVLLFSAHGLPKRYID-EGDPYPQQCQETTRLIAE 218 (320)
T ss_pred -----cCCCCeEEEEecCCCchhhhh-cCCchHHHHHHHHHHHHH
Confidence 543455555544433432222 256789999999999997
No 93
>PF00728 Glyco_hydro_20: Glycosyl hydrolase family 20, catalytic domain; InterPro: IPR015883 Glycoside hydrolase family 20 GH20 from CAZY comprises enzymes with several known activities; beta-hexosaminidase (3.2.1.52 from EC); lacto-N-biosidase (3.2.1.140 from EC). Carbonyl oxygen of the C-2 acetamido group of the substrate acts as the catalytic nucleophile/base in this family of enzymes. In the brain and other tissues, beta-hexosaminidase A degrades GM2 gangliosides; specifically, the enzyme hydrolyses terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides. There are 3 forms of beta-hexosaminidase: hexosaminidase A is a trimer, with one alpha, one beta-A and one beta-B chain; hexosaminidase B is a tetramer of two beta-A and two beta-B chains; and hexosaminidase S is a homodimer of alpha chains. The two beta chains are derived from the cleavage of a precursor. Mutations in the beta-chain lead to Sandhoff disease, a lysosomal storage disorder characterised by accumulation of GM2 ganglioside [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 3RPM_A 1C7T_A 1QBA_A 1QBB_A 1C7S_A 3RCN_A 2YL8_A 2YL6_A 2YLL_A 2YL5_C ....
Probab=58.81 E-value=19 Score=34.03 Aligned_cols=111 Identities=15% Similarity=0.118 Sum_probs=65.6
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhcCCC---------C---CC---CCCCccCHHHHHHHHHHHHH
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAGAS---------V---NS---DDDFYTNAIVKGYYKNHVKK 66 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~G~~---------~---~~---~~~fy~d~~~~~~~~~~v~~ 66 (316)
+..+++.|+++||.||+-+ +.+|.+.....+....+.. . .. ..-..++|+..+..++.+++
T Consensus 75 i~~lv~yA~~~gI~VIPei----d~PGH~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~t~~~~~~l~~e 150 (351)
T PF00728_consen 75 IRELVAYAKERGIEVIPEI----DTPGHAEAWLKAYPELGCSAWPEDKSWPNSTCWYPDNGVLDPSNPETYEFLKDLLDE 150 (351)
T ss_dssp HHHHHHHHHHTT-EEEEEE----EESSS-HHHHHHHHHHCCCHTTCSSSCEEEETTSEEEEEE-TTSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCceeeec----cCchHHHHHHHhCchhhccccccccccccccccCCCcccCCCCcHHHHHHHHHHHHH
Confidence 4679999999999999987 3567776554443222221 0 00 12335689999999999999
Q ss_pred HHhcccccccccccCCCcEEEEee-cCCCCC--CC-C-------------CChHHHHHHHHHHHHHHHhcCCCCeEEEcc
Q 048104 67 VLTRINTITRIAYKDDPTIMAWEL-INEPRC--QA-D-------------YSGKTLNNWVQEMASYVKSIDNKHLLEIGL 129 (316)
Q Consensus 67 vv~R~N~~tg~~ykd~PaI~aWeL-~NEP~~--~~-~-------------~~~~~~~~w~~e~a~~Iks~Dp~hlVt~G~ 129 (316)
++.- +. .+.| .| +-|... .. + ...+.+..+++++++.+++.... ++.-+.
T Consensus 151 ~~~~--------f~-~~~i---HiGgDEv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~v~~~g~~-~~~W~D 217 (351)
T PF00728_consen 151 VADL--------FP-SKYI---HIGGDEVNYNCWNNSPECQAWMKQNGLTDPNDLFQYFVNRLADIVKKHGKK-PIIWND 217 (351)
T ss_dssp HHHH--------HT-SSEE---EEE-TSTTTHHHHCHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHTTSE-EEEEST
T ss_pred HHhh--------CC-CCeE---EeCCcccccccccCCHHHhhHHhhcCCchHHHHHHHHHHHHHHHHHhcCCc-EEEEcc
Confidence 9987 44 3332 23 233321 10 0 00123456788999999998766 665543
No 94
>PRK14565 triosephosphate isomerase; Provisional
Probab=58.38 E-value=44 Score=30.42 Aligned_cols=44 Identities=25% Similarity=0.242 Sum_probs=27.0
Q ss_pred CCcEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCeEEEcc
Q 048104 82 DPTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLLEIGL 129 (316)
Q Consensus 82 ~PaI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt~G~ 129 (316)
+|.|+|| ||.+.--.....-.+-++++.++||+..++..|..|.
T Consensus 153 ~~ivIAY----EPvWAIGtG~~a~~e~i~~~~~~Ir~~~~~~~IlYGG 196 (237)
T PRK14565 153 GEFIIAY----EPVWAIGGSTIPSNDAIAEAFEIIRSYDSKSHIIYGG 196 (237)
T ss_pred CCEEEEE----CCHHHhCCCCCCCHHHHHHHHHHHHHhCCCceEEEcC
Confidence 4678888 4654311100112244788999999988877777663
No 95
>KOG0496 consensus Beta-galactosidase [Carbohydrate transport and metabolism]
Probab=58.31 E-value=29 Score=35.99 Aligned_cols=82 Identities=22% Similarity=0.337 Sum_probs=57.3
Q ss_pred HHHHHHHHHHCCCeEEEeCCC----CCCCCCCchhhhHHHHhcCCCCCCCCCC-ccCHHHHHHHHHHHHHHHhccccccc
Q 048104 2 LDFVTSEARKYGIRLILSLSN----NYHDFGGRPQYVNWARAAGASVNSDDDF-YTNAIVKGYYKNHVKKVLTRINTITR 76 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n----~w~~~Gg~~~y~~w~~~~G~~~~~~~~f-y~d~~~~~~~~~~v~~vv~R~N~~tg 76 (316)
|-++|.+|++.|++|+|-+-- -| .+||.+. |-+.. ..-.| =+|+..+...+++++.||.+.+ .
T Consensus 90 lvkFikl~~~~GLyv~LRiGPyIcaEw-~~GG~P~---wL~~~-----pg~~~Rt~nepfk~~~~~~~~~iv~~mk---~ 157 (649)
T KOG0496|consen 90 LVKFIKLIHKAGLYVILRIGPYICAEW-NFGGLPW---WLRNV-----PGIVFRTDNEPFKAEMERWTTKIVPMMK---K 157 (649)
T ss_pred HHHHHHHHHHCCeEEEecCCCeEEecc-cCCCcch---hhhhC-----CceEEecCChHHHHHHHHHHHHHHHHHH---H
Confidence 346799999999999997642 24 3588763 33220 01122 2478899999999999999866 4
Q ss_pred ccccCCCcEEEEeecCCCC
Q 048104 77 IAYKDDPTIMAWELINEPR 95 (316)
Q Consensus 77 ~~ykd~PaI~aWeL~NEP~ 95 (316)
.-|++--=|++=++-||-.
T Consensus 158 L~~~qGGPIIl~QIENEYG 176 (649)
T KOG0496|consen 158 LFASQGGPIILVQIENEYG 176 (649)
T ss_pred HHhhcCCCEEEEEeechhh
Confidence 4566655677789999965
No 96
>PF04914 DltD_C: DltD C-terminal region; InterPro: IPR006998 The dlt operon (dltA to dltD) of Lactobacillus rhamnosus 7469 encodes four proteins responsible for the esterification of lipoteichoic acid (LTA) by D-alanine. These esters play an important role in controlling the net anionic charge of the poly (GroP) moiety of LTA. DltA and DltC encode the D-alanine-D-alanyl carrier protein ligase (Dcl) and D-alanyl carrier protein (Dcp), respectively. Whereas the functions of DltA and DltC are defined, the functions of DltB and DltD are unknown. In vitro assays showed that DltD bound Dcp for ligation with D-alanine by Dcl in the presence of ATP. In contrast, the homologue of Dcp, the Escherichia coli acyl carrier protein (ACP), involved in fatty acid biosynthesis, was not bound to DltD and thus was not ligated with D-alanine. DltD also catalyzed the hydrolysis of the mischarged D-alanyl-ACP. The hydrophobic N-terminal sequence of DltD was required for anchoring the protein in the membrane. It is hypothesized that this membrane-associated DltD facilitates the binding of Dcp and Dcl for ligation of Dcp with D-alanine and that the resulting D-alanyl-Dcp is translocated to the primary site of D-alanylation []. These sequences contain the C-terminal region of DltD.; PDB: 3BMA_C.
Probab=57.08 E-value=70 Score=26.27 Aligned_cols=50 Identities=16% Similarity=0.339 Sum_probs=35.4
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhcCCCCCCCCCCccCHHHHHHHHHHHHHHHhc
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAGASVNSDDDFYTNAIVKGYYKNHVKKVLTR 70 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~G~~~~~~~~fy~d~~~~~~~~~~v~~vv~R 70 (316)
|.-+|+.|++.|+.+++.+.- --..|+..+|. +.+.++.|-+-|+.++.+
T Consensus 38 l~l~L~~~k~~g~~~lfVi~P---------vNg~wydytG~----------~~~~r~~~y~kI~~~~~~ 87 (130)
T PF04914_consen 38 LQLLLDVCKELGIDVLFVIQP---------VNGKWYDYTGL----------SKEMRQEYYKKIKYQLKS 87 (130)
T ss_dssp HHHHHHHHHHTT-EEEEEE-------------HHHHHHTT------------HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCceEEEecC---------CcHHHHHHhCC----------CHHHHHHHHHHHHHHHHH
Confidence 456899999999999998742 11346655553 568888899999999998
No 97
>PLN02803 beta-amylase
Probab=56.61 E-value=25 Score=35.66 Aligned_cols=83 Identities=17% Similarity=0.288 Sum_probs=49.4
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCCCch------hhhHHHHhcCCCCCCCCCCccCH---------------------
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHDFGGRP------QYVNWARAAGASVNSDDDFYTNA--------------------- 54 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~~Gg~~------~y~~w~~~~G~~~~~~~~fy~d~--------------------- 54 (316)
...+++.+++.|||+...| .++.+||.- .-++|....|. ...+-||+|.
T Consensus 146 Y~~l~~mvr~~GLKlq~vm--SFHqCGGNVGD~~~IpLP~WV~e~~~--~~pDi~ftDr~G~rn~EyLSlg~D~~pvl~G 221 (548)
T PLN02803 146 YAELVQMVQKHGLKLQVVM--SFHQCGGNVGDSCSIPLPPWVLEEMS--KNPDLVYTDRSGRRNPEYISLGCDSLPVLRG 221 (548)
T ss_pred HHHHHHHHHHcCCeEEEEE--EecccCCCCCCcccccCCHHHHHhhh--cCCCceEecCCCCcccceeccccccchhccC
Confidence 4578999999999988776 234566641 14567655443 1233455443
Q ss_pred -HHHHHHHHHHHHHHhcccccccccccCCCcEEEEeecCCC
Q 048104 55 -IVKGYYKNHVKKVLTRINTITRIAYKDDPTIMAWELINEP 94 (316)
Q Consensus 55 -~~~~~~~~~v~~vv~R~N~~tg~~ykd~PaI~aWeL~NEP 94 (316)
+.++.|.++++.+-.....+ . ..+|..-+++==|
T Consensus 222 RTplq~Y~Dfm~SFr~~F~~~-----l-~~~I~eI~VGlGP 256 (548)
T PLN02803 222 RTPIQVYSDYMRSFRERFKDY-----L-GGVIAEIQVGMGP 256 (548)
T ss_pred CCHHHHHHHHHHHHHHHHHHH-----h-cCceEEEEecccc
Confidence 35677888888777762222 2 2466666665433
No 98
>cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=54.11 E-value=1.6e+02 Score=28.25 Aligned_cols=119 Identities=15% Similarity=0.154 Sum_probs=63.0
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhcCCCC-----------CCCCCCccCHHHHHHHHHHHHHHHhc
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAGASV-----------NSDDDFYTNAIVKGYYKNHVKKVLTR 70 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~G~~~-----------~~~~~fy~d~~~~~~~~~~v~~vv~R 70 (316)
+..+++-|++|||.||+-+ +..|.+.....+...-+... ....--.++|+..+..++.+++++.-
T Consensus 88 i~eiv~yA~~rgI~VIPEI----D~PGH~~a~l~~~pel~~~~~~~~~~~~~~~~~~~L~~~~~~t~~f~~~ll~E~~~l 163 (357)
T cd06563 88 IREIVAYAAERGITVIPEI----DMPGHALAALAAYPELGCTGGPGSVVSVQGVVSNVLCPGKPETYTFLEDVLDEVAEL 163 (357)
T ss_pred HHHHHHHHHHcCCEEEEec----CCchhHHHHHHhCccccCCCCCCccccccCcCCCccCCCChhHHHHHHHHHHHHHHh
Confidence 4568999999999999976 24566543332211101000 01112346788999999999999885
Q ss_pred ccccccccccCCCc-EEEEeecCCCCCCC------CCCh-HHHHHHHHHHHHHHHhcCCCCeEEEc
Q 048104 71 INTITRIAYKDDPT-IMAWELINEPRCQA------DYSG-KTLNNWVQEMASYVKSIDNKHLLEIG 128 (316)
Q Consensus 71 ~N~~tg~~ykd~Pa-I~aWeL~NEP~~~~------~~~~-~~~~~w~~e~a~~Iks~Dp~hlVt~G 128 (316)
.. ..=+..+.|.. ..+|+ |-|.|.. ..+. +....|+++|+++|++.. ..++.-+
T Consensus 164 F~-~~~iHiGgDE~~~~~w~--~~~~~~~~~~~~g~~~~~~l~~~f~~~~~~~v~~~G-~~~i~W~ 225 (357)
T cd06563 164 FP-SPYIHIGGDEVPKGQWE--KSPACQARMKEEGLKDEHELQSYFIKRVEKILASKG-KKMIGWD 225 (357)
T ss_pred CC-CCeEEEeccccCCcccc--cCHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHcC-CEEEEee
Confidence 21 00011222221 12232 1122210 0122 234568999999999865 4455443
No 99
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=53.53 E-value=11 Score=37.62 Aligned_cols=21 Identities=14% Similarity=0.123 Sum_probs=18.9
Q ss_pred HHHHHHHHHHCCCeEEEeCCC
Q 048104 2 LDFVTSEARKYGIRLILSLSN 22 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n 22 (316)
|..+|++|+++|||||++++=
T Consensus 83 l~~Li~~~H~~Gi~vi~D~V~ 103 (479)
T PRK09441 83 LLNAIDALHENGIKVYADVVL 103 (479)
T ss_pred HHHHHHHHHHCCCEEEEEECc
Confidence 678999999999999999863
No 100
>TIGR02100 glgX_debranch glycogen debranching enzyme GlgX. This family consists of the GlgX protein from the E. coli glycogen operon and probable equivalogs from other prokaryotic species. GlgX is not required for glycogen biosynthesis, but instead acts as a debranching enzyme for glycogen catabolism. This model distinguishes GlgX from pullanases and other related proteins that also operate on alpha-1,6-glycosidic linkages. In the wide band between the trusted and noise cutoffs are functionally similar enzymes, mostly from plants, that act similarly but usually are termed isoamylase.
Probab=53.41 E-value=34 Score=36.10 Aligned_cols=21 Identities=19% Similarity=0.320 Sum_probs=18.7
Q ss_pred HHHHHHHHHHCCCeEEEeCCC
Q 048104 2 LDFVTSEARKYGIRLILSLSN 22 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n 22 (316)
|-.+|++|+++||+|||++.=
T Consensus 247 fk~LV~~~H~~GI~VIlDvV~ 267 (688)
T TIGR02100 247 FKTMVRALHDAGIEVILDVVY 267 (688)
T ss_pred HHHHHHHHHHCCCEEEEEECc
Confidence 568999999999999999863
No 101
>PRK03705 glycogen debranching enzyme; Provisional
Probab=51.95 E-value=36 Score=35.67 Aligned_cols=69 Identities=14% Similarity=0.181 Sum_probs=38.6
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCCCc-hhhhH----------HHHhcCCC--CC-CCCCC-ccCHHHHHHHHHHHHH
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHDFGGR-PQYVN----------WARAAGAS--VN-SDDDF-YTNAIVKGYYKNHVKK 66 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~~Gg~-~~y~~----------w~~~~G~~--~~-~~~~f-y~d~~~~~~~~~~v~~ 66 (316)
|-.+|++|+++||+|||++.=|....++. ..+.. |....|.. .. -..++ +.+|.+++...+.++.
T Consensus 244 fk~LV~~~H~~GI~VIlDvV~NHt~~~~~~~~~~~~~~~d~~~yy~~~~~g~~~~~~g~g~~ln~~~p~Vr~~iid~l~~ 323 (658)
T PRK03705 244 FRDAVKALHKAGIEVILDVVFNHSAELDLDGPTLSLRGIDNRSYYWIREDGDYHNWTGCGNTLNLSHPAVVDWAIDCLRY 323 (658)
T ss_pred HHHHHHHHHHCCCEEEEEEcccCccCcCCCCcchhcccCCCccceEECCCCCcCCCCCccCcccCCCHHHHHHHHHHHHH
Confidence 56799999999999999986332211110 00000 11000100 00 00122 4688899999998888
Q ss_pred HHhc
Q 048104 67 VLTR 70 (316)
Q Consensus 67 vv~R 70 (316)
.++.
T Consensus 324 W~~e 327 (658)
T PRK03705 324 WVET 327 (658)
T ss_pred HHHH
Confidence 8875
No 102
>PF02156 Glyco_hydro_26: Glycosyl hydrolase family 26; InterPro: IPR022790 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 26 GH26 from CAZY encompasses mainly mannan endo-1,4-beta-mannosidases (3.2.1.78 from EC). Mannan endo-1,4-beta-mannosidase hydrolyses mannan and galactomannan, but displays little activity towards other plant cell wall polysaccharides []. The enzyme randomly hydrolyses 1,4-beta-D-linkages in mannans, galacto-mannans, glucomannans and galactoglucomannans. This entry also incoporates the enzyme Endogluconase H 3.2.1.4 from EC catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans. ; GO: 0008810 cellulase activity, 0016985 mannan endo-1,4-beta-mannosidase activity, 0006080 substituted mannan metabolic process; PDB: 2QHA_A 3CBW_A 2WHK_A 2VI0_A 2BVD_A 2BV9_A 2CIT_A 2V3G_A 2CIP_A 2X2Y_B ....
Probab=51.21 E-value=2.2e+02 Score=26.92 Aligned_cols=61 Identities=15% Similarity=0.223 Sum_probs=28.0
Q ss_pred HHHHhhhcCCCcEEEE---cccCCc--CCCCCCHHHHHHHHHHHHHHHHHHHHcCCceeeeeeeccccCC
Q 048104 194 HWTDSKTILKKPLVFS---EFGKSC--KEAGFSINVRDSFLNTIYMNIYNLARNGGAIGGGMVWQLMAEG 258 (316)
Q Consensus 194 ~~~~a~~~~~KPvvi~---EfG~~~--~~~g~~~~~r~~~~~~v~~~~~~~~~~~~~~~G~~~W~~~~~g 258 (316)
.++..+. .+.|||+- |+.-.. .+.. +. ...+=|...+..+++.+++- ..+-.++|.|++.+
T Consensus 142 ~l~~l~~-~~vPVl~Rp~HE~nG~WfwWg~~-~~-~~~~~y~~lwr~~~~~l~~~-~g~~Nliwvw~~~~ 207 (311)
T PF02156_consen 142 FLKQLKD-AGVPVLFRPFHEMNGGWFWWGAK-GH-CTPEQYKALWRHMVDYLRNV-KGLHNLIWVWSPNG 207 (311)
T ss_dssp HHHHHHC-TTS-EEEEESTSTTSSSSTTSTT-ST-CHHHHHHHHHHHHHHHHHTT-ST-TSEEEEE-EBT
T ss_pred HHHHhhc-CCCeEEEeehhhcCCCccccCCC-CC-CCHHHHHHHHHHHHHHHHhc-cCCceEEEEecCCC
Confidence 3334444 67899964 555221 2111 10 11222333455555555532 13557899998875
No 103
>PRK14510 putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional
Probab=51.14 E-value=62 Score=36.53 Aligned_cols=99 Identities=18% Similarity=0.314 Sum_probs=55.9
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCCCc-----------------------hhhhHHHHhcCCCCCCCCCC-ccCHHHH
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHDFGGR-----------------------PQYVNWARAAGASVNSDDDF-YTNAIVK 57 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~~Gg~-----------------------~~y~~w~~~~G~~~~~~~~f-y~d~~~~ 57 (316)
|..+|++|+++||+|||+++=|....++. ..|..|. |+ .+.+ +++|.++
T Consensus 249 fk~lV~~~H~~GI~VILDvV~NHt~~~~~~~p~~~~~~~d~~~yy~~~~~~~~~y~~~~---G~----gn~~n~~~p~v~ 321 (1221)
T PRK14510 249 FAQAIKEAQSAGIAVILDVVFNHTGESNHYGPTLSAYGSDNSPYYRLEPGNPKEYENWW---GC----GNLPNLERPFIL 321 (1221)
T ss_pred HHHHHHHHHHCCCEEEEEEccccccCCCCCCCcccccCCCCCCceEecCCCCCcccCCC---CC----CCccccCCHHHH
Confidence 67899999999999999975322111110 0111111 11 0011 2467888
Q ss_pred HHHHHHHHHHHhcccccccccccCCCcEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCeE
Q 048104 58 GYYKNHVKKVLTRINTITRIAYKDDPTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLL 125 (316)
Q Consensus 58 ~~~~~~v~~vv~R~N~~tg~~ykd~PaI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlV 125 (316)
+...+.++.-++. .+.|-+ .|++.+..-. -..+++++...+|+++|+-++
T Consensus 322 ~~i~d~lr~Wv~~--gVDGfR---------fDla~~l~r~-------~~~f~~~~~~~l~ai~~d~~l 371 (1221)
T PRK14510 322 RLPMDVLRSWAKR--GVDGFR---------LDLADELARE-------PDGFIDEFRQFLKAMDQDPVL 371 (1221)
T ss_pred HHHHHHHHHHHHh--CCCEEE---------EechhhhccC-------ccchHHHHHHHHHHhCCCcCc
Confidence 7777777777762 333433 3434332100 124667888999999987654
No 104
>TIGR02102 pullulan_Gpos pullulanase, extracellular, Gram-positive. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. In contrast, a glycogen debranching enzyme such GlgX, homologous to this family, can release glucose at alpha,1-6 linkages from glycogen first subjected to limit degradation by phosphorylase. Characterized members of this family include a surface-located pullulanase from Streptococcus pneumoniae (PubMed:11083842) and an extracellular bifunctional amylase/pullulanase with C-terminal pullulanase activity (PubMed:8798645).
Probab=50.27 E-value=1.3e+02 Score=33.69 Aligned_cols=109 Identities=19% Similarity=0.387 Sum_probs=59.7
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCC----CCC-chhhhHHHHhcCCCCC--CCCCC-ccCHHHHHHHHHHHHHHHhcccc
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHD----FGG-RPQYVNWARAAGASVN--SDDDF-YTNAIVKGYYKNHVKKVLTRINT 73 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~----~Gg-~~~y~~w~~~~G~~~~--~~~~f-y~d~~~~~~~~~~v~~vv~R~N~ 73 (316)
|-.+|++|+++||+|||++.=|... +-+ .+.|-.+....|.... ...++ ..++.+++...+.++..++.
T Consensus 557 fK~LV~alH~~GI~VILDVVyNHt~~~~~f~~~~p~Yy~~~~~~G~~~~~~~g~~l~~e~~~vrk~iiDsl~yWv~e--- 633 (1111)
T TIGR02102 557 FKNLINEIHKRGMGVILDVVYNHTAKVYIFEDLEPNYYHFMDADGTPRTSFGGGRLGTTHEMSRRILVDSIKYLVDE--- 633 (1111)
T ss_pred HHHHHHHHHHCCCEEEEecccccccccccccccCCCceEeeCCCCCcccccCCCCCCcCCHHHHHHHHHHHHHHHHh---
Confidence 6689999999999999997533211 111 0111111111111000 00111 24678889999999888886
Q ss_pred cccccccCCCcEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCeEEEcccCc
Q 048104 74 ITRIAYKDDPTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLLEIGLEGF 132 (316)
Q Consensus 74 ~tg~~ykd~PaI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt~G~eG~ 132 (316)
|+=|- +=++|+.. . . ..++.++...++++||+.+ .+| |+|
T Consensus 634 -----y~VDG--FRfDl~g~---~---d----~~~~~~~~~~l~~~dP~~~-liG-E~W 673 (1111)
T TIGR02102 634 -----FKVDG--FRFDMMGD---H---D----AASIEIAYKEAKAINPNII-MIG-EGW 673 (1111)
T ss_pred -----cCCcE--EEEecccc---C---C----HHHHHHHHHHHHHhCcCEE-EEE-ecc
Confidence 55442 23455532 1 1 1345666677889999644 344 454
No 105
>PLN03244 alpha-amylase; Provisional
Probab=49.82 E-value=2.4e+02 Score=30.50 Aligned_cols=118 Identities=13% Similarity=0.138 Sum_probs=65.6
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCC---------CCCch-hhhHHHHhcCCC--CCCCCCCccCHHHHHHHHHHHHHHHh
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHD---------FGGRP-QYVNWARAAGAS--VNSDDDFYTNAIVKGYYKNHVKKVLT 69 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~---------~Gg~~-~y~~w~~~~G~~--~~~~~~fy~d~~~~~~~~~~v~~vv~ 69 (316)
|-++|++|+++||.|||+++-+... ++|.+ .|-... ..|.. ......-|.++++++.....++..++
T Consensus 443 LK~LVD~aH~~GI~VILDvV~NH~~~d~~~GL~~fDGt~~~Yf~~~-~~g~~~~WGs~~fnyg~~EVr~FLLsna~yWle 521 (872)
T PLN03244 443 FKRLVDEAHGLGLLVFLDIVHSYAAADEMVGLSLFDGSNDCYFHTG-KRGHHKHWGTRMFKYGDLDVLHFLISNLNWWIT 521 (872)
T ss_pred HHHHHHHHHHCCCEEEEEecCccCCCccccchhhcCCCccceeccC-CCCccCCCCCceecCCCHHHHHHHHHHHHHHHH
Confidence 6789999999999999997643211 11211 111100 00100 01122346789999999999999887
Q ss_pred cccccccccccCCCcEEEEeecCC---------CCCCCCCChHHHHHHHHHHHHHHHhcCCCCe
Q 048104 70 RINTITRIAYKDDPTIMAWELINE---------PRCQADYSGKTLNNWVQEMASYVKSIDNKHL 124 (316)
Q Consensus 70 R~N~~tg~~ykd~PaI~aWeL~NE---------P~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hl 124 (316)
.. .+-|.++-.-.+++-.+=+.+ |+... ......++..+-..|+++.|+.+
T Consensus 522 Ey-hIDGFRfDaVtSMLY~d~G~~~f~g~~~~y~n~~~---d~dAv~fL~laN~~ih~~~P~~i 581 (872)
T PLN03244 522 EY-QIDGFQFHSLASMIYTHNGFASFNGDLDDYCNQYV---DKDALMYLILANEILHALHPKII 581 (872)
T ss_pred Hh-CcCcceeecchhheeeccccccccCCccccccccC---CchHHHHHHHHHHHHHHhCCCeE
Confidence 62 222333332233443332211 11111 12455778888888999999843
No 106
>PF10035 DUF2179: Uncharacterized protein conserved in bacteria (DUF2179); InterPro: IPR019264 This entry, found mostly in hypothetical bacterial proteins, has no known function. ; PDB: 3HLU_B.
Probab=49.66 E-value=18 Score=24.57 Aligned_cols=20 Identities=20% Similarity=0.498 Sum_probs=15.1
Q ss_pred HHHHHHHHHhcCCCCeEEEc
Q 048104 109 VQEMASYVKSIDNKHLLEIG 128 (316)
Q Consensus 109 ~~e~a~~Iks~Dp~hlVt~G 128 (316)
+.++-..|+++||+..|++.
T Consensus 29 ~~~l~~~I~~~Dp~AFi~v~ 48 (55)
T PF10035_consen 29 LPKLKKIIKEIDPKAFISVS 48 (55)
T ss_dssp HHHHHHHHHCC-TT-EEEE-
T ss_pred HHHHHHHHHHhCCCEEEEEE
Confidence 56888999999999999984
No 107
>cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase. MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal domain found near the membrane-bound end, and a C-terminal luminal domain. Both of
Probab=49.22 E-value=2.4e+02 Score=26.82 Aligned_cols=114 Identities=17% Similarity=0.129 Sum_probs=60.0
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCCCC---CCchhhhHHHHh-------cCCCC-----CCCCC--CccCHHHHHHHHHHHH
Q 048104 3 DFVTSEARKYGIRLILSLSNNYHDF---GGRPQYVNWARA-------AGASV-----NSDDD--FYTNAIVKGYYKNHVK 65 (316)
Q Consensus 3 D~~l~~A~k~gi~vil~L~n~w~~~---Gg~~~y~~w~~~-------~G~~~-----~~~~~--fy~d~~~~~~~~~~v~ 65 (316)
..+|++.++.|+||++-++..=..- .....|.+-... .|.+. ..... =|+||++++++++.++
T Consensus 69 ~~mi~~L~~~G~k~~~~i~P~v~~~~~~~~~~~~~e~~~~g~~v~~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~ 148 (339)
T cd06602 69 PEFVDELHANGQHYVPILDPAISANEPTGSYPPYDRGLEMDVFIKNDDGSPYIGKVWPGYTVFPDFLNPNTQEWWTDEIK 148 (339)
T ss_pred HHHHHHHHHCCCEEEEEEeCccccCcCCCCCHHHHHHHHCCeEEECCCCCEEEEEeCCCCCcCcCCCCHHHHHHHHHHHH
Confidence 5789999999999999864321110 111122111100 11110 11111 2789999999999999
Q ss_pred HHHhcccccccccccCCCcEEEEeecCCCCCCCCCChHH-HHHHHHHHHHHHHhcCCCCeEEEc
Q 048104 66 KVLTRINTITRIAYKDDPTIMAWELINEPRCQADYSGKT-LNNWVQEMASYVKSIDNKHLLEIG 128 (316)
Q Consensus 66 ~vv~R~N~~tg~~ykd~PaI~aWeL~NEP~~~~~~~~~~-~~~w~~e~a~~Iks~Dp~hlVt~G 128 (316)
.++.. ++-+ .-|.=+|||..... -... ...+.+.+...+|+.-.++++...
T Consensus 149 ~~~~~--------~Gvd---g~w~D~~Ep~~~~~-~hN~y~~~~~~~~~~~~~~~~~~r~~~~s 200 (339)
T cd06602 149 DFHDQ--------VPFD---GLWIDMNEPSNFYD-VHNLYGLSEAIATYKALQSIPGKRPFVIS 200 (339)
T ss_pred HHHhc--------CCCc---EEEecCCCCchHhh-hcchhhHHHHHHHHHHHHhcCCCCCEEEE
Confidence 87765 2222 44777899864310 0011 123444555667766223444443
No 108
>cd02879 GH18_plant_chitinase_class_V The class V plant chitinases have a glycosyl hydrolase family 18 (GH18) domain, but lack the chitin-binding domain present in other GH18 enzymes. The GH18 domain of the class V chitinases has endochitinase activity in some cases and no catalytic activity in others. Included in this family is a lectin found in black locust (Robinia pseudoacacia) bark, which binds chitin but lacks chitinase activity. Also included is a chitinase-related receptor-like kinase (CHRK1) from tobacco (Nicotiana tabacum), with an N-terminal GH18 domain and a C-terminal kinase domain, which is thought to be part of a plant signaling pathway. The GH18 domain of CHRK1 is expressed extracellularly where it binds chitin but lacks chitinase activity.
Probab=49.13 E-value=1.7e+02 Score=27.27 Aligned_cols=57 Identities=21% Similarity=0.323 Sum_probs=40.2
Q ss_pred CccCHHHHHHHHHHHHHHHhcccccccccccCCCcEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhc
Q 048104 50 FYTNAIVKGYYKNHVKKVLTRINTITRIAYKDDPTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSI 119 (316)
Q Consensus 50 fy~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd~PaI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks~ 119 (316)
.-.+++.|+.|.+-+..++.+ |+=|---+-||- |... .+.+.+..+++++...+++.
T Consensus 86 ~~~~~~~R~~fi~siv~~l~~--------~~fDGidiDWE~---P~~~--~d~~n~~~ll~elr~~l~~~ 142 (299)
T cd02879 86 MASDPTARKAFINSSIKVARK--------YGFDGLDLDWEF---PSSQ--VEMENFGKLLEEWRAAVKDE 142 (299)
T ss_pred HhCCHHHHHHHHHHHHHHHHH--------hCCCceeecccC---CCCh--hHHHHHHHHHHHHHHHHHHH
Confidence 346889999999988888887 554544566774 3221 13567889999999988753
No 109
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex). SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases.
Probab=47.74 E-value=2.5e+02 Score=26.62 Aligned_cols=106 Identities=9% Similarity=0.062 Sum_probs=61.6
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHh---cCCCC--------CCCCCCccCHHHHHHHHHHHHHHHhc
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARA---AGASV--------NSDDDFYTNAIVKGYYKNHVKKVLTR 70 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~---~G~~~--------~~~~~fy~d~~~~~~~~~~v~~vv~R 70 (316)
+-.+++-|++|||.||+-+- ..|.+......+-. .+... ....--.++|+..+..++.+++++.-
T Consensus 77 i~elv~yA~~rgI~vIPEiD----~PGH~~a~~~~~p~l~~~~~~~~~~~~~~~~~~~l~~~~~~t~~fl~~v~~E~~~~ 152 (329)
T cd06568 77 YKDIVAYAAERHITVVPEID----MPGHTNAALAAYPELNCDGKAKPLYTGIEVGFSSLDVDKPTTYEFVDDVFRELAAL 152 (329)
T ss_pred HHHHHHHHHHcCCEEEEecC----CcHHHHHHHHhChhhccCCCCCccccccCCCCcccCCCCHHHHHHHHHHHHHHHHh
Confidence 45689999999999999872 44555332221100 11100 00112356888999999999998875
Q ss_pred ccccccccccCCCcEEEEeec-CCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCeEEE
Q 048104 71 INTITRIAYKDDPTIMAWELI-NEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLLEI 127 (316)
Q Consensus 71 ~N~~tg~~ykd~PaI~aWeL~-NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt~ 127 (316)
+. .|.| .|+ -|.... ..+.+..++++|++.+++.. .+++.-
T Consensus 153 --------f~-~~~i---HiGgDE~~~~---~~~~~~~f~~~~~~~v~~~G-k~~~~W 194 (329)
T cd06568 153 --------TP-GPYI---HIGGDEAHST---PHDDYAYFVNRVRAIVAKYG-KTPVGW 194 (329)
T ss_pred --------CC-CCeE---EEecccCCCC---chHHHHHHHHHHHHHHHHCC-CeEEEE
Confidence 32 2211 111 121111 23567889999999999875 345543
No 110
>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB). Initially distinguished on the basis of differences in electrophoretic mobility in starch gel, GANC and GANAB have been shown to have other differences, including those of substrate specificity. GANC and GANAB are key enzymes in glycogen metabolism that hydrolyze terminal, non-reducing 1,4-linked alpha-D-glucose residues from glycogen in the endoplasmic reticulum. The GANC/GANAB family includes the alpha-glucosidase II (ModA) from Dictyostelium discoideum as well as the alpha-glucosidase II (GLS2, or ROT2 - Reversal of TOR2 lethality protein 2) from Saccharomyces cerevisiae.
Probab=47.69 E-value=2.5e+02 Score=26.59 Aligned_cols=85 Identities=13% Similarity=0.240 Sum_probs=47.5
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHh-------cCCC-----CCCCCCC--ccCHHHHHHHHHHHHHHH
Q 048104 3 DFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARA-------AGAS-----VNSDDDF--YTNAIVKGYYKNHVKKVL 68 (316)
Q Consensus 3 D~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~-------~G~~-----~~~~~~f--y~d~~~~~~~~~~v~~vv 68 (316)
..++++.++.|+||++.++..=..-.+.+.|..-... .|.+ .+....+ |++|++++++.+.++.+.
T Consensus 67 ~~mi~~L~~~G~k~~~~~~P~v~~~~~~~~y~e~~~~g~~vk~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~ 146 (339)
T cd06603 67 EKMQEKLASKGRKLVTIVDPHIKRDDGYYVYKEAKDKGYLVKNSDGGDFEGWCWPGSSSWPDFLNPEVRDWWASLFSYDK 146 (339)
T ss_pred HHHHHHHHHCCCEEEEEecCceecCCCCHHHHHHHHCCeEEECCCCCEEEEEECCCCcCCccCCChhHHHHHHHHHHHHh
Confidence 4689999999999999875321100011223221100 0100 0011112 678999999999998876
Q ss_pred hcccccccccccCCCcEEEEeecCCCCC
Q 048104 69 TRINTITRIAYKDDPTIMAWELINEPRC 96 (316)
Q Consensus 69 ~R~N~~tg~~ykd~PaI~aWeL~NEP~~ 96 (316)
.. .+.+-...|-=+|||..
T Consensus 147 ~~---------~~~g~~g~w~D~~Ep~~ 165 (339)
T cd06603 147 YK---------GSTENLYIWNDMNEPSV 165 (339)
T ss_pred hc---------ccCCCceEEeccCCccc
Confidence 53 12333455667888863
No 111
>PLN02905 beta-amylase
Probab=47.40 E-value=70 Score=33.24 Aligned_cols=90 Identities=13% Similarity=0.331 Sum_probs=53.1
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCCCch------hhhHHHHhcCCCCCCCCCCccCHHHHHHHHHHHHHHHhcccccc
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHDFGGRP------QYVNWARAAGASVNSDDDFYTNAIVKGYYKNHVKKVLTRINTIT 75 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~~Gg~~------~y~~w~~~~G~~~~~~~~fy~d~~~~~~~~~~v~~vv~R~N~~t 75 (316)
...+++.+++.|||+...| .++.+||.- .-++|....|. ..++-||+|..
T Consensus 325 Y~~L~~mvr~~GLKlqvVM--SFHqCGGNVGD~~~IPLP~WV~e~g~--~nPDifftDrs-------------------- 380 (702)
T PLN02905 325 YKRLFQMVRELKLKLQVVM--SFHECGGNVGDDVCIPLPHWVAEIGR--SNPDIFFTDRE-------------------- 380 (702)
T ss_pred HHHHHHHHHHcCCeEEEEE--EecccCCCCCCcccccCCHHHHHhhh--cCCCceEecCC--------------------
Confidence 3578999999999988776 334566641 14567755443 24567899842
Q ss_pred cccccCCCcEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHh
Q 048104 76 RIAYKDDPTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKS 118 (316)
Q Consensus 76 g~~ykd~PaI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks 118 (316)
| .++... +.|-.-|+|-..+...-+.+.+|.+.-....+.
T Consensus 381 G--~rn~Ey-LSlg~D~~pvl~GRTplq~Y~DFM~SFr~~F~~ 420 (702)
T PLN02905 381 G--RRNPEC-LSWGIDKERILRGRTALEVYFDYMRSFRVEFDE 420 (702)
T ss_pred C--CccCce-eeeecccccccCCCCHHHHHHHHHHHHHHHHHH
Confidence 1 233334 569999999776532223444444433333333
No 112
>cd06549 GH18_trifunctional GH18 domain of an uncharacterized family of bacterial proteins, which share a common three-domain architecture: an N-terminal glycosyl hydrolase family 18 (GH18) domain, a glycosyl transferase family 2 domain, and a C-terminal polysaccharide deacetylase domain.
Probab=46.81 E-value=2.2e+02 Score=26.39 Aligned_cols=93 Identities=10% Similarity=0.228 Sum_probs=57.4
Q ss_pred CCccCHHHHHHHHHHHHHHHhcccccccccccCCCcEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCeEEEc
Q 048104 49 DFYTNAIVKGYYKNHVKKVLTRINTITRIAYKDDPTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLLEIG 128 (316)
Q Consensus 49 ~fy~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd~PaI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt~G 128 (316)
.+.+|++.|+.+.+-+-.++.+ |+=|---+=||-. .. ...+.+..+++++...+++. +.++++.
T Consensus 81 ~~l~~~~~R~~fi~~iv~~~~~--------~~~dGidiD~E~~---~~---~d~~~~~~fl~eL~~~l~~~--~~~lsv~ 144 (298)
T cd06549 81 RLLADPSARAKFIANIAAYLER--------NQADGIVLDFEEL---PA---DDLPKYVAFLSELRRRLPAQ--GKQLTVT 144 (298)
T ss_pred HHhcCHHHHHHHHHHHHHHHHH--------hCCCCEEEecCCC---Ch---hHHHHHHHHHHHHHHHhhhc--CcEEEEE
Confidence 4567999999998888888887 5544445667632 11 13467889999999998875 3455553
Q ss_pred ccCccCCCCCCcCCCCCCCCcccchhhccCCCCceEEEeecCCCCC
Q 048104 129 LEGFYGDSIPDKKQFNPGYQVGTDFISNNMIKEIDFTTIHAYPDQW 174 (316)
Q Consensus 129 ~eG~~~~~~~~~~~~np~~~~g~d~~~~~~~~~iD~~t~H~Yp~~w 174 (316)
... .+ .+.|+.. ..+.+|++.+-.|-.+|
T Consensus 145 v~~------------~~---~~~d~~~--l~~~~D~v~lMtYD~~~ 173 (298)
T cd06549 145 VPA------------DE---ADWNLKA--LARNADKLILMAYDEHY 173 (298)
T ss_pred ecC------------CC---CCCCHHH--HHHhCCEEEEEEeccCC
Confidence 310 00 1123332 24678887776665544
No 113
>PRK09505 malS alpha-amylase; Reviewed
Probab=46.06 E-value=18 Score=38.03 Aligned_cols=22 Identities=32% Similarity=0.545 Sum_probs=19.4
Q ss_pred HHHHHHHHHHCCCeEEEeCCCC
Q 048104 2 LDFVTSEARKYGIRLILSLSNN 23 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~ 23 (316)
|..+|++|+++|||||+++.-|
T Consensus 294 fk~Lv~~aH~~Gi~VilD~V~N 315 (683)
T PRK09505 294 LRTLVDEAHQRGIRILFDVVMN 315 (683)
T ss_pred HHHHHHHHHHCCCEEEEEECcC
Confidence 6789999999999999997643
No 114
>PF02057 Glyco_hydro_59: Glycosyl hydrolase family 59; InterPro: IPR001286 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 59 GH59 from CAZY comprises enzymes with only one known activity; galactocerebrosidase (3.2.1.46 from EC). Globoid cell leukodystrophy (Krabbe disease) is a severe, autosomal recessive disorder that results from deficiency of galactocerebrosidase (GALC) activity [, , ]. GALC is responsible for the lysosomal catabolism of certain galactolipids, including galactosylceramide and psychosine [].; GO: 0004336 galactosylceramidase activity, 0006683 galactosylceramide catabolic process; PDB: 3ZR6_A 3ZR5_A.
Probab=43.34 E-value=56 Score=34.22 Aligned_cols=178 Identities=19% Similarity=0.222 Sum_probs=79.4
Q ss_pred HHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhcCCCCCCCCCCccCHHHHHHHH-HHHHHHHhcccccccccccCC
Q 048104 4 FVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAGASVNSDDDFYTNAIVKGYYK-NHVKKVLTRINTITRIAYKDD 82 (316)
Q Consensus 4 ~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~G~~~~~~~~fy~d~~~~~~~~-~~v~~vv~R~N~~tg~~ykd~ 82 (316)
+++++|+|++=.+.|..- .|.. +-|.+. | ...-|.++..-+.|. +++.-..+. | .
T Consensus 116 ~L~~eAKkrNP~ikl~~L-~W~~-------PgW~~~-g-----~~~~~~~~~~~a~Y~~~wl~ga~~~--------~--g 171 (669)
T PF02057_consen 116 WLMAEAKKRNPNIKLYGL-PWGF-------PGWVGN-G-----WNWPYDNPQLTAYYVVSWLLGAKKT--------H--G 171 (669)
T ss_dssp HHHHHHHHH-TT-EEEEE-ES-B--------GGGGT-T-----SS-TTSSHHHHHHHHHHHHHHHHHH--------H---
T ss_pred hhHHHHHhhCCCCeEEEe-ccCC-------CccccC-C-----CCCcccchhhhhHHHHHHHHHHHHH--------h--C
Confidence 578999999766666543 3432 345532 2 122366777666663 333222222 2 2
Q ss_pred CcEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCeEEEcccCccCCCCCCcCCCCCCCCcccchhhc-cCCCC
Q 048104 83 PTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLLEIGLEGFYGDSIPDKKQFNPGYQVGTDFISN-NMIKE 161 (316)
Q Consensus 83 PaI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt~G~eG~~~~~~~~~~~~np~~~~g~d~~~~-~~~~~ 161 (316)
..|---...||=.. -.+|++.+...+.+-.-++.=.++.++++..- +.+...+ .....
T Consensus 172 l~idYvg~~NEr~~--------~~~~ik~lr~~l~~~gy~~vkiva~D~~~~~~-------------~~~m~~D~~l~~a 230 (669)
T PF02057_consen 172 LDIDYVGIWNERGF--------DVNYIKWLRKALNSNGYNKVKIVAADNNWESI-------------SDDMLSDPELRNA 230 (669)
T ss_dssp ----EE-S-TTS-----------HHHHHHHHHHHHHTT-TT-EEEEEEE-STTH-------------HHHHHH-HHHHHH
T ss_pred CCceEechhhccCC--------ChhHHHHHHHHHhhccccceEEEEeCCCccch-------------hhhhhcCHHHHhc
Confidence 34444456788432 13788888888888888876666665543210 0111111 12346
Q ss_pred ceEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhhcCCCcEEEEcccCCcCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 048104 162 IDFTTIHAYPDQWLPGKNYYAQMQFVQKWLESHWTDSKTILKKPLVFSEFGKSCKEAGFSINVRDSFLNTIYMNIYNLAR 241 (316)
Q Consensus 162 iD~~t~H~Yp~~w~~~~~~~~~~~~~~~~i~~~~~~a~~~~~KPvvi~EfG~~~~~~g~~~~~r~~~~~~v~~~~~~~~~ 241 (316)
||++..| ||..-. . +.++. .+|||.-.|=+..-.. ... ..-+..++.+-+-
T Consensus 231 vdvig~H-Y~~~~~----------------~---~~a~~-~~K~lW~SE~~s~~~~----~~g-~g~~ar~ln~~yv--- 281 (669)
T PF02057_consen 231 VDVIGYH-YPGTYS----------------S---KNAKL-TGKPLWSSEDYSTFNY----NVG-AGCWARILNRNYV--- 281 (669)
T ss_dssp --EEEEE-S-TT----------------------HHHHH-HT-EEEEEEEE-S-TT----HHH-HHHHHHHHHHHHH---
T ss_pred ccEeccc-cCCCCc----------------H---HHHHH-hCCCeEEcCCcccccC----cCc-hHHHHHHHHhhhh---
Confidence 9999999 675310 0 11333 6899999995543221 111 1222333332211
Q ss_pred cCCceeeeeeecccc
Q 048104 242 NGGAIGGGMVWQLMA 256 (316)
Q Consensus 242 ~~~~~~G~~~W~~~~ 256 (316)
++ .....++|.+..
T Consensus 282 ~g-~mT~~I~w~lVa 295 (669)
T PF02057_consen 282 NG-RMTAYINWPLVA 295 (669)
T ss_dssp HH---SEEEEE-SEE
T ss_pred cc-ceEEEEeehhhh
Confidence 12 367788898753
No 115
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in
Probab=42.71 E-value=2.9e+02 Score=26.33 Aligned_cols=119 Identities=17% Similarity=0.125 Sum_probs=62.9
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhcCCC-----------CCCCCCCccCHHHHHHHHHHHHHHHhc
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAGAS-----------VNSDDDFYTNAIVKGYYKNHVKKVLTR 70 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~G~~-----------~~~~~~fy~d~~~~~~~~~~v~~vv~R 70 (316)
+..+|+-|++|||.||+-+ +.+|.+.....+...-+.. .....--.++|+..+..++.++++++-
T Consensus 72 i~eiv~yA~~rgI~vIPEI----D~PGH~~a~~~~~p~l~~~~~~~~~~~~~~~~~~~L~~~~~~t~~fl~~vl~E~~~l 147 (348)
T cd06562 72 VKEIVEYARLRGIRVIPEI----DTPGHTGSWGQGYPELLTGCYAVWRKYCPEPPCGQLNPTNPKTYDFLKTLFKEVSEL 147 (348)
T ss_pred HHHHHHHHHHcCCEEEEec----cCchhhHHHHHhChhhhCCCCccccccccCCCCccccCCChhHHHHHHHHHHHHHHh
Confidence 4568999999999999987 3456554333222111110 000112246888999999999999886
Q ss_pred ccccccccccCCCc-EEEEeecCCCCCCC------CCCh-HHHHHHHHHHHHHHHhcCCCCeEEEc
Q 048104 71 INTITRIAYKDDPT-IMAWELINEPRCQA------DYSG-KTLNNWVQEMASYVKSIDNKHLLEIG 128 (316)
Q Consensus 71 ~N~~tg~~ykd~Pa-I~aWeL~NEP~~~~------~~~~-~~~~~w~~e~a~~Iks~Dp~hlVt~G 128 (316)
.. ..=+..+.|.. --.|+. -|.|.. ..+. +....+++++.++|++.. .+++.-+
T Consensus 148 F~-~~~iHiGgDE~~~~~w~~--~p~~~~~m~~~g~~~~~~l~~~f~~~~~~~l~~~G-k~~i~W~ 209 (348)
T cd06562 148 FP-DKYFHLGGDEVNFNCWNS--NPEIQKFMKKNNGTDYSDLESYFIQRALDIVRSLG-KTPIVWE 209 (348)
T ss_pred cC-CcceEeecCCCCCCcccC--CHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHcC-CeEEEee
Confidence 21 00011222221 112221 111110 0011 234568899999999876 4555544
No 116
>PF00704 Glyco_hydro_18: Glycosyl hydrolases family 18; InterPro: IPR001223 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Some members of this family, GH18 from CAZY, belong to the chitinase class II group which includes chitinase, chitodextrinase and the killer toxin of Kluyveromyces lactis. The chitinases hydrolyse chitin oligosaccharides. The family also includes various glycoproteins from mammals; cartilage glycoprotein and the oviduct-specific glycoproteins are two examples.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1ITX_A 3ALG_A 3ALF_A 1NAR_A 3QOK_A 3G6L_A 3G6M_A 2DT1_A 2B31_A 2O92_A ....
Probab=42.60 E-value=77 Score=29.49 Aligned_cols=119 Identities=16% Similarity=0.341 Sum_probs=68.4
Q ss_pred HHHCCCeEEEeCCCCCCCCCCchhhh-HHHHhcCCCCCCCCCCccCHHHHHHHHHHHHHHHhcccccccccccCCCcEEE
Q 048104 9 ARKYGIRLILSLSNNYHDFGGRPQYV-NWARAAGASVNSDDDFYTNAIVKGYYKNHVKKVLTRINTITRIAYKDDPTIMA 87 (316)
Q Consensus 9 A~k~gi~vil~L~n~w~~~Gg~~~y~-~w~~~~G~~~~~~~~fy~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd~PaI~a 87 (316)
++..|+|++|++.. ...-. .|. .+-.+++.++.+.+-+..++++ |+=|---+-
T Consensus 69 ~~~~~~kvllsigg-------~~~~~~~~~-----------~~~~~~~~r~~f~~~i~~~l~~--------y~~DGidiD 122 (343)
T PF00704_consen 69 AKNPGVKVLLSIGG-------WGMSSDGFS-----------QLLSNPAKRQNFINNIVSFLKK--------YGFDGIDID 122 (343)
T ss_dssp HHHTT-EEEEEEEE-------TTSSHHHHH-----------HHHHSHHHHHHHHHHHHHHHHH--------HT-SEEEEE
T ss_pred hhccCceEEEEecc-------ccccccccc-----------cccccHHHHHHHHHhhhhhhcc--------cCcceeeee
Confidence 45569999998832 21000 111 2234778888888888888888 554433344
Q ss_pred Eeec-CCCCCCCCCChHHHHHHHHHHHHHHHhcCC---CCeEEEcccCccCCCCCCcCCCCCCCCcccchhhccCCCCce
Q 048104 88 WELI-NEPRCQADYSGKTLNNWVQEMASYVKSIDN---KHLLEIGLEGFYGDSIPDKKQFNPGYQVGTDFISNNMIKEID 163 (316)
Q Consensus 88 WeL~-NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp---~hlVt~G~eG~~~~~~~~~~~~np~~~~g~d~~~~~~~~~iD 163 (316)
||-. +++. ....+.+..+++++...+++... +.+||+..... |......++... .+.+|
T Consensus 123 ~e~~~~~~~---~~~~~~~~~~l~~L~~~l~~~~~~~~~~~ls~a~p~~------------~~~~~~~~~~~l--~~~vD 185 (343)
T PF00704_consen 123 WEYPSSSGD---PQDKDNYTAFLKELRKALKRANRSGKGYILSVAVPPS------------PDYYDKYDYKEL--AQYVD 185 (343)
T ss_dssp ESSTTSTSS---TTHHHHHHHHHHHHHHHHHHHHHHHSTSEEEEEEECS------------HHHHTTHHHHHH--HTTSS
T ss_pred eeecccccc---chhhhhhhhhhhhhhhhhcccccccceeEEeeccccc------------cccccccccccc--ccccc
Confidence 5543 1122 11356899999999999998654 67777753211 000011122222 46799
Q ss_pred EEEeecC
Q 048104 164 FTTIHAY 170 (316)
Q Consensus 164 ~~t~H~Y 170 (316)
|+.+..|
T Consensus 186 ~v~~m~y 192 (343)
T PF00704_consen 186 YVNLMTY 192 (343)
T ss_dssp EEEEETT
T ss_pred ccccccc
Confidence 9888877
No 117
>PLN02161 beta-amylase
Probab=42.28 E-value=1.5e+02 Score=30.07 Aligned_cols=88 Identities=13% Similarity=0.240 Sum_probs=52.3
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCCCch------hhhHHHHhcCCCCCCCCCCccCHHHHHHHHHHHHHHHhcccccc
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHDFGGRP------QYVNWARAAGASVNSDDDFYTNAIVKGYYKNHVKKVLTRINTIT 75 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~~Gg~~------~y~~w~~~~G~~~~~~~~fy~d~~~~~~~~~~v~~vv~R~N~~t 75 (316)
...+++.+++.|||+...|. ++.+||.- .-++|....|. ...+-||+|..
T Consensus 156 Y~~l~~mvr~~GLKlq~vmS--FHqCGGNvGd~~~IpLP~WV~~~g~--~~pDi~ftDr~-------------------- 211 (531)
T PLN02161 156 YEELFRLISEAGLKLHVALC--FHSNMHLFGGKGGISLPLWIREIGD--VNKDIYYRDKN-------------------- 211 (531)
T ss_pred HHHHHHHHHHcCCeEEEEEE--ecccCCCCCCccCccCCHHHHhhhc--cCCCceEEcCC--------------------
Confidence 35789999999999877662 23444420 14567765443 34567899842
Q ss_pred cccccCCCcEEEEeecCCCCCCCCCChHHH----HHHHHHHHHHH
Q 048104 76 RIAYKDDPTIMAWELINEPRCQADYSGKTL----NNWVQEMASYV 116 (316)
Q Consensus 76 g~~ykd~PaI~aWeL~NEP~~~~~~~~~~~----~~w~~e~a~~I 116 (316)
| .++.. -+.|-+-|+|...+...-+.+ ..|-.+++.++
T Consensus 212 G--~rn~E-yLSlg~D~~pvl~GRTplq~Y~Dfm~SFr~~F~~~~ 253 (531)
T PLN02161 212 G--FSNND-YLTLGVDQLPLFGGRTAVQCYEDFMLSFSTKFEPYI 253 (531)
T ss_pred C--Ccccc-eeeeecccchhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 1 12222 368899999987653211333 44455555555
No 118
>PRK09997 hydroxypyruvate isomerase; Provisional
Probab=42.05 E-value=1.6e+02 Score=26.50 Aligned_cols=87 Identities=13% Similarity=0.121 Sum_probs=54.3
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhcCCCCCCCCCCccCHHHHHHHHHHHHHHHhcccccccccccC
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAGASVNSDDDFYTNAIVKGYYKNHVKKVLTRINTITRIAYKD 81 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~G~~~~~~~~fy~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd 81 (316)
+..+++.|++.|.+.|..+. |..+ .=++.++..+.+.+.++.++.. -++
T Consensus 87 ~~~~i~~a~~lga~~i~~~~------g~~~-----------------~~~~~~~~~~~~~~~l~~l~~~--------a~~ 135 (258)
T PRK09997 87 VAAAIRYARALGNKKINCLV------GKTP-----------------AGFSSEQIHATLVENLRYAANM--------LMK 135 (258)
T ss_pred HHHHHHHHHHhCCCEEEECC------CCCC-----------------CCCCHHHHHHHHHHHHHHHHHH--------HHH
Confidence 57789999999999876532 2110 0023345567777788888877 667
Q ss_pred CCcEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCe
Q 048104 82 DPTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDNKHL 124 (316)
Q Consensus 82 ~PaI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hl 124 (316)
....+++|-.|-+.+... +..=.+++...|+.+++.++
T Consensus 136 ~Gv~l~lE~~n~~~~~~~-----~~~~~~~~~~ll~~v~~~~v 173 (258)
T PRK09997 136 EDILLLIEPINHFDIPGF-----HLTGTRQALKLIDDVGCCNL 173 (258)
T ss_pred cCCEEEEEeCCCcCCCCC-----ccCCHHHHHHHHHHhCCCCE
Confidence 778899998886433210 00113455667777776553
No 119
>COG0366 AmyA Glycosidases [Carbohydrate transport and metabolism]
Probab=41.63 E-value=23 Score=34.99 Aligned_cols=21 Identities=38% Similarity=0.510 Sum_probs=18.7
Q ss_pred HHHHHHHHHHCCCeEEEeCCC
Q 048104 2 LDFVTSEARKYGIRLILSLSN 22 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n 22 (316)
++.++++|+++|||||+++.-
T Consensus 79 ~~~li~~~H~~gi~vi~D~V~ 99 (505)
T COG0366 79 FKELVEEAHKRGIKVILDLVF 99 (505)
T ss_pred HHHHHHHHHHCCCEEEEEecc
Confidence 578999999999999999853
No 120
>cd06546 GH18_CTS3_chitinase GH18 domain of CTS3 (chitinase 3), an uncharacterized protein from the human fungal pathogen Coccidioides posadasii. CTS3 has a chitinase-like glycosyl hydrolase family 18 (GH18) domain; and has homologs in bacteria as well as fungi.
Probab=40.53 E-value=2.9e+02 Score=25.17 Aligned_cols=122 Identities=16% Similarity=0.141 Sum_probs=62.6
Q ss_pred HHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhcCCCCCCCCCCccCHHHHHHHHHHHHHHHhcccccccccccCCCcE
Q 048104 6 TSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAGASVNSDDDFYTNAIVKGYYKNHVKKVLTRINTITRIAYKDDPTI 85 (316)
Q Consensus 6 l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~G~~~~~~~~fy~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd~PaI 85 (316)
+..+++.|+||+|++ ||... | .-...-.+++.++.|.+-+..+++. |+=|--=
T Consensus 65 i~~~~~~g~KVllSi-------GG~~~--------~----~fs~~a~~~~~r~~f~~s~~~~~~~--------~~~DGiD 117 (256)
T cd06546 65 LAILQSSGVKVMGML-------GGAAP--------G----SFSRLDDDDEDFERYYGQLRDMIRR--------RGLDGLD 117 (256)
T ss_pred HHHHHhCCCEEEEEE-------CCCCC--------C----CcccccCCHHHHHHHHHHHHHHHHH--------hCCCceE
Confidence 456789999999987 54310 0 0000114566677776666667766 4433222
Q ss_pred EEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCeEEEcccCccCCCCCCcCCCCCCCCcccchhhc--cCCCCce
Q 048104 86 MAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLLEIGLEGFYGDSIPDKKQFNPGYQVGTDFISN--NMIKEID 163 (316)
Q Consensus 86 ~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt~G~eG~~~~~~~~~~~~np~~~~g~d~~~~--~~~~~iD 163 (316)
+-||- |. +...+...++++... ++++-++|+.....+-... +....|.++... .....+|
T Consensus 118 iDwE~---p~-----~~~~~~~ll~~Lr~~---~~~~~~lT~Ap~~~~~~~g-------~~~~~~~~~~~l~~~~~~~~D 179 (256)
T cd06546 118 LDVEE---PM-----SLDGIIRLIDRLRSD---FGPDFIITLAPVASALTGG-------EANLSGFDYRELEQARGDKID 179 (256)
T ss_pred Eeeec---CC-----CHhHHHHHHHHHHHH---hCCCcEEEECCccccccCC-------cccccccCHHHHHHhhCCcee
Confidence 33442 21 123455555555443 3566777765432111100 001123344332 2345799
Q ss_pred EEEeecCCC
Q 048104 164 FTTIHAYPD 172 (316)
Q Consensus 164 ~~t~H~Yp~ 172 (316)
|+.+.+|-.
T Consensus 180 f~nvQfYn~ 188 (256)
T cd06546 180 FYNAQFYNG 188 (256)
T ss_pred EEEEcCcCC
Confidence 999988854
No 121
>PF14386 DUF4417: Domain of unknown function (DUF4417)
Probab=39.96 E-value=40 Score=29.78 Aligned_cols=64 Identities=14% Similarity=0.268 Sum_probs=42.4
Q ss_pred HHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhcCCCCCC-----CCCCccCHHHHHHHHHHHHHHHhccccc
Q 048104 4 FVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAGASVNS-----DDDFYTNAIVKGYYKNHVKKVLTRINTI 74 (316)
Q Consensus 4 ~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~G~~~~~-----~~~fy~d~~~~~~~~~~v~~vv~R~N~~ 74 (316)
.+-+..+++||+||.++ +| +....|.-|. .|.+..+ ....-++.+.++.+++-++.|+.|+++.
T Consensus 101 ~~g~~~q~~Gi~VIP~v--~W---~~~~s~~~~~--~gi~~~~ivaist~g~~~~~~~~~~f~~Gl~em~~rl~P~ 169 (200)
T PF14386_consen 101 WLGAYWQSNGIKVIPNV--SW---SDKRSFDFCF--DGIPKGSIVAISTNGCINNKEDKKLFLDGLREMLKRLRPK 169 (200)
T ss_pred HHHHHHHHCCCeEcceE--Ee---cCcchHHHHH--hhcccCCEEEEEEecccCCHHHHHHHHHHHHHHHhccCCC
Confidence 35677889999999988 55 3344443333 2333211 1234567888999999999999994443
No 122
>PRK00042 tpiA triosephosphate isomerase; Provisional
Probab=39.69 E-value=1.1e+02 Score=27.97 Aligned_cols=19 Identities=32% Similarity=0.406 Sum_probs=15.8
Q ss_pred HHHHHH----HHHCCCeEEEeCC
Q 048104 3 DFVTSE----ARKYGIRLILSLS 21 (316)
Q Consensus 3 D~~l~~----A~k~gi~vil~L~ 21 (316)
|.+|.. |.++||.+|+|.-
T Consensus 105 d~~v~~K~~~a~~~gl~pIvCiG 127 (250)
T PRK00042 105 DELVNKKVKAALKAGLTPILCVG 127 (250)
T ss_pred HHHHHHHHHHHHHCCCEEEEEcC
Confidence 566777 9999999999873
No 123
>PLN00196 alpha-amylase; Provisional
Probab=39.11 E-value=26 Score=34.66 Aligned_cols=20 Identities=15% Similarity=0.273 Sum_probs=18.3
Q ss_pred HHHHHHHHHHCCCeEEEeCC
Q 048104 2 LDFVTSEARKYGIRLILSLS 21 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~ 21 (316)
|..+|++|+++||+||++..
T Consensus 94 lk~Lv~~aH~~GIkVilDvV 113 (428)
T PLN00196 94 LKSLIEAFHGKGVQVIADIV 113 (428)
T ss_pred HHHHHHHHHHCCCEEEEEEC
Confidence 67899999999999999975
No 124
>TIGR02455 TreS_stutzeri trehalose synthase, Pseudomonas stutzeri type. Trehalose synthase catalyzes a one-step conversion of maltose to trehalose. This is an alternative to the OtsAB and TreYZ pathways. This family includes a characterized example from Pseudomonas stutzeri plus very closely related sequences from other Pseudomonads. Cutoff scores are set to find a more distantly related sequence from Desulfovibrio vulgaris, likely to be functionally equivalent, between trusted and noise limits.
Probab=38.80 E-value=29 Score=36.19 Aligned_cols=22 Identities=14% Similarity=-0.087 Sum_probs=19.7
Q ss_pred HHHHHHHHHHCCCeEEEeCCCC
Q 048104 2 LDFVTSEARKYGIRLILSLSNN 23 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~ 23 (316)
++.++++|+++|||||++|.-|
T Consensus 132 f~~L~~~Ah~~G~~vi~DlVpn 153 (688)
T TIGR02455 132 LIQLSRMAAAHNAITIDDIIPA 153 (688)
T ss_pred HHHHHHHHHHCCCEEEEEeCCC
Confidence 6889999999999999999643
No 125
>cd02876 GH18_SI-CLP Stabilin-1 interacting chitinase-like protein (SI-CLP) is a eukaryotic chitinase-like protein of unknown function that interacts with the endocytic/sorting transmembrane receptor stabilin-1 and is secreted from the lysosome. SI-CLP has a glycosyl hydrolase family 18 (GH18) domain but lacks a chitin-binding domain. The catalytic amino acids of the GH18 domain are not conserved in SI-CLP, similar to the chitolectins YKL-39, YKL-40, and YM1/2. Human SI-CLP is sorted to late endosomes and secretory lysosomes in alternatively activated macrophages.
Probab=38.48 E-value=96 Score=29.03 Aligned_cols=61 Identities=10% Similarity=0.120 Sum_probs=39.5
Q ss_pred CCccCHHHHHHHHHHHHHHHhcccccccccccCCCcEEE-EeecCCCCCCC-CCChHHHHHHHHHHHHHHHhcC
Q 048104 49 DFYTNAIVKGYYKNHVKKVLTRINTITRIAYKDDPTIMA-WELINEPRCQA-DYSGKTLNNWVQEMASYVKSID 120 (316)
Q Consensus 49 ~fy~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd~PaI~a-WeL~NEP~~~~-~~~~~~~~~w~~e~a~~Iks~D 120 (316)
.+..|++.|+.+.+-+..++.+ |+=|---+- ||- |.... ......+..+++++...+++..
T Consensus 85 ~~~~~~~~R~~fi~s~~~~~~~--------~~~DGidiD~we~---p~~~~~~~d~~~~~~~l~el~~~l~~~~ 147 (318)
T cd02876 85 SLLNDEQEREKLIKLLVTTAKK--------NHFDGIVLEVWSQ---LAAYGVPDKRKELIQLVIHLGETLHSAN 147 (318)
T ss_pred HHHcCHHHHHHHHHHHHHHHHH--------cCCCcEEEechhh---hcccCCHHHHHHHHHHHHHHHHHHhhcC
Confidence 3467899999999988888887 443322232 442 22111 1124678899999999988754
No 126
>PF05089 NAGLU: Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain; InterPro: IPR024733 Alpha-N-acetylglucosaminidase is a lysosomal enzyme that is required for the stepwise degradation of heparan sulphate []. Mutations on the alpha-N-acetylglucosaminidase gene can lead to mucopolysaccharidosis type IIIB (MPS IIIB; or Sanfilippo syndrome type B), characterised by neurological dysfunction but relatively mild somatic manifestations []. Alpha-N-acetylglucosaminidase is composed of three domains. This entry represents the central domain, which has a tim barrel fold [].; PDB: 4A4A_A 2VC9_A 2VCC_A 2VCB_A 2VCA_A.
Probab=37.17 E-value=92 Score=29.84 Aligned_cols=108 Identities=17% Similarity=0.190 Sum_probs=58.0
Q ss_pred HHHHHHHHCCCeEEEeCCCCCCCCCCchh-hhHHHHhcCCCCC--------CCCCC--ccCHHHHHHHHHHHHHHHhccc
Q 048104 4 FVTSEARKYGIRLILSLSNNYHDFGGRPQ-YVNWARAAGASVN--------SDDDF--YTNAIVKGYYKNHVKKVLTRIN 72 (316)
Q Consensus 4 ~~l~~A~k~gi~vil~L~n~w~~~Gg~~~-y~~w~~~~G~~~~--------~~~~f--y~d~~~~~~~~~~v~~vv~R~N 72 (316)
++|+.+++.||..||.=+. |-.+. +.+-. .+..+. ....| .+||-..+.-+.++++..+.
T Consensus 99 kIl~RmreLGm~PVLPaF~-----G~VP~~~~~~~--P~a~i~~~~~W~~f~~~~~L~P~dplF~~i~~~F~~~q~~~-- 169 (333)
T PF05089_consen 99 KILDRMRELGMTPVLPAFA-----GHVPRAFKRKY--PNANITRQGNWNGFCRPYFLDPTDPLFAEIAKLFYEEQIKL-- 169 (333)
T ss_dssp HHHHHHHHHT-EEEEE--S------EE-TTHHHHS--TT--EE---EETTEE--EEE-SS--HHHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHcCCcccCCCcC-----CCCChHHHhcC--CCCEEeeCCCcCCCCCCceeCCCCchHHHHHHHHHHHHHHh--
Confidence 5788999999999996332 22211 00000 010000 01111 25777888888889999888
Q ss_pred ccccccccCCCcEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCC-eEEEc
Q 048104 73 TITRIAYKDDPTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDNKH-LLEIG 128 (316)
Q Consensus 73 ~~tg~~ykd~PaI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~h-lVt~G 128 (316)
|+ ...|.+-|..||-...+. ..+-+.+-.+.+.+.+++.||+. .|..|
T Consensus 170 ------yG-~~~~Y~~D~FnE~~p~~~-~~~~l~~~s~~v~~am~~~dp~AvWvmQg 218 (333)
T PF05089_consen 170 ------YG-TDHIYAADPFNEGGPPSG-DPEYLANVSKAVYKAMQAADPDAVWVMQG 218 (333)
T ss_dssp ------H----SEEE--TTTTS---TT-S---HHHHHHHHHHHHHHH-TT-EEEEEE
T ss_pred ------cC-CCceeCCCccCCCCCCCC-chHHHHHHHHHHHHHHHhhCCCcEEEEcc
Confidence 98 778999999999776543 23347788888999999999986 45555
No 127
>PF09875 DUF2102: Uncharacterized protein conserved in archaea (DUF2102); InterPro: IPR012025 The exact functionof this protein unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=36.68 E-value=33 Score=27.04 Aligned_cols=21 Identities=14% Similarity=0.327 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHhcCCCCeEEE
Q 048104 107 NWVQEMASYVKSIDNKHLLEI 127 (316)
Q Consensus 107 ~w~~e~a~~Iks~Dp~hlVt~ 127 (316)
.-+++++..||++||+|+.+=
T Consensus 42 e~V~~~i~~iR~ld~~~IF~K 62 (104)
T PF09875_consen 42 EEVDKVIEEIRKLDPNHIFVK 62 (104)
T ss_pred HHHHHHHHHHHhhCCCceEee
Confidence 457899999999999998754
No 128
>PF01261 AP_endonuc_2: Xylose isomerase-like TIM barrel; InterPro: IPR012307 This TIM alpha/beta barrel structure is found in xylose isomerase (P19148 from SWISSPROT) and in endonuclease IV (P12638 from SWISSPROT, 3.1.21.2 from EC). This domain is also found in the N termini of bacterial myo-inositol catabolism proteins. These are involved in the myo-inositol catabolism pathway, and is required for growth on myo-inositol in Rhizobium leguminosarum bv. viciae []. ; PDB: 3KWS_B 3DX5_A 3CQH_B 3CQI_A 3CQK_A 3CQJ_B 2G0W_B 1DXI_A 2ZDS_D 3TVA_B ....
Probab=35.93 E-value=1.6e+02 Score=24.69 Aligned_cols=86 Identities=15% Similarity=0.159 Sum_probs=53.0
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhcCCCCCCCCCCccCHHHHHHHHHHHHHHHhcccccccccccC
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAGASVNSDDDFYTNAIVKGYYKNHVKKVLTRINTITRIAYKD 81 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~G~~~~~~~~fy~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd 81 (316)
|...++.|++.|++.+......+... .-....+..+...+.++.++.+ -+.
T Consensus 73 ~~~~i~~a~~lg~~~i~~~~g~~~~~---------------------~~~~~~~~~~~~~~~l~~l~~~--------a~~ 123 (213)
T PF01261_consen 73 LKKAIDLAKRLGAKYIVVHSGRYPSG---------------------PEDDTEENWERLAENLRELAEI--------AEE 123 (213)
T ss_dssp HHHHHHHHHHHTBSEEEEECTTESSS---------------------TTSSHHHHHHHHHHHHHHHHHH--------HHH
T ss_pred HHHHHHHHHHhCCCceeecCcccccc---------------------cCCCHHHHHHHHHHHHHHHHhh--------hhh
Confidence 56789999999999987542210000 0012235667777778888876 555
Q ss_pred CCcEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCC
Q 048104 82 DPTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDNKH 123 (316)
Q Consensus 82 ~PaI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~h 123 (316)
.-..++.|-...+.+....+ ++++...++.+++.+
T Consensus 124 ~gv~i~lE~~~~~~~~~~~~-------~~~~~~~l~~~~~~~ 158 (213)
T PF01261_consen 124 YGVRIALENHPGPFSETPFS-------VEEIYRLLEEVDSPN 158 (213)
T ss_dssp HTSEEEEE-SSSSSSSEESS-------HHHHHHHHHHHTTTT
T ss_pred hcceEEEecccCccccchhh-------HHHHHHHHhhcCCCc
Confidence 55677777555554432211 577888888888655
No 129
>KOG2331 consensus Predicted glycosylhydrolase [General function prediction only]
Probab=35.32 E-value=87 Score=31.05 Aligned_cols=91 Identities=12% Similarity=0.199 Sum_probs=64.7
Q ss_pred HHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhcCCCCCCCCCCccCHHHHHHHHHHHHHHHhcccccccccccCCCcEE
Q 048104 7 SEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAGASVNSDDDFYTNAIVKGYYKNHVKKVLTRINTITRIAYKDDPTIM 86 (316)
Q Consensus 7 ~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~G~~~~~~~~fy~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd~PaI~ 86 (316)
..|++||++|+=+|+.-|.. |+. ....|..+.+-.+.+.+.+.++++. ++=|
T Consensus 118 n~AHrHGV~vlGTFItEw~e-g~~---------------~c~~~La~~es~~~~~e~L~~l~~~--------fgFd---- 169 (526)
T KOG2331|consen 118 NTAHRHGVKVLGTFITEWDE-GKA---------------TCKEFLATEESVEMTVERLVELARF--------FGFD---- 169 (526)
T ss_pred chhhhcCceeeeeEEEEecc-chh---------------HHHHHHccchhHHHHHHHHHHHHHH--------hCCc----
Confidence 46999999999999987753 321 2345666666788888999999988 7766
Q ss_pred EEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCeEE
Q 048104 87 AWELINEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLLE 126 (316)
Q Consensus 87 aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt 126 (316)
+|-+-=|-.... ..-+.+..++..+.+..++--|+-+|.
T Consensus 170 GWLiNiEn~i~~-~~i~~l~~F~~~Lt~~~~~~~p~~~Vi 208 (526)
T KOG2331|consen 170 GWLINIENKIDL-AKIPNLIQFVSHLTKVLHSSVPGGLVI 208 (526)
T ss_pred eEEEEeeeccCh-hhCccHHHHHHHHHHHHhhcCCCceEE
Confidence 454333322211 012468899999999999999999985
No 130
>PF14682 SPOB_ab: Sporulation initiation phospho-transferase B, C-terminal; PDB: 1F51_C 2FTK_B 1IXM_B.
Probab=35.01 E-value=71 Score=25.71 Aligned_cols=46 Identities=20% Similarity=0.503 Sum_probs=30.7
Q ss_pred ccCCCcEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHH-hcCC---CCeE
Q 048104 79 YKDDPTIMAWELINEPRCQADYSGKTLNNWVQEMASYVK-SIDN---KHLL 125 (316)
Q Consensus 79 ykd~PaI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Ik-s~Dp---~hlV 125 (316)
+..+|-.+.||+.+|...-.. ..+.+..|+++....+. ++|| |||-
T Consensus 13 W~~~~~~LeyEVlg~~~dls~-~D~~L~~w~~~ff~~l~~~v~~~~eNhl~ 62 (115)
T PF14682_consen 13 WENHPFQLEYEVLGEVKDLSA-YDQKLTTWMRTFFSLLEEHVDPEGENHLS 62 (115)
T ss_dssp TSS-SSEEEEEEESS---GGG-GHHHHHHHHHHHHHHHHHHB-SSS-EEEE
T ss_pred cCCCcEEEEEEEcCCccccch-hHHHHHHHHHHHHHHHHHhcCcccCCeEE
Confidence 899999999999999865332 34678888888777666 4555 5654
No 131
>KOG2806 consensus Chitinase [Carbohydrate transport and metabolism]
Probab=32.55 E-value=3.7e+02 Score=26.58 Aligned_cols=61 Identities=15% Similarity=0.202 Sum_probs=43.3
Q ss_pred CCccCHHHHHHHHHHHHHHHhcccccccccccCCCcEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCC
Q 048104 49 DFYTNAIVKGYYKNHVKKVLTRINTITRIAYKDDPTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDN 121 (316)
Q Consensus 49 ~fy~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd~PaI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp 121 (316)
..-.|++.|+.|.+-+-.++.+ |+=|--=+.|+.-. + .......+..+++|+-.++++.-.
T Consensus 140 ~~~s~~~~r~~FI~Sii~fl~~--------~~fDGvDL~We~P~--~--~~~d~~~~~~~i~elr~~~~~~~~ 200 (432)
T KOG2806|consen 140 LVLSDRMIRAKFIESVVSFIKD--------YGFDGVDLAWEWPL--F--TPSDQLEFSRFIQELRSAFARETL 200 (432)
T ss_pred hhhcChHHHHHHHHHHHHHHHH--------cCCCceeeeeECCC--C--chhhHHHHHHHHHHHHHHHHHHhh
Confidence 3457899999999999999998 76666568888873 1 111234677888888877775533
No 132
>PF13547 GTA_TIM: GTA TIM-barrel-like domain
Probab=32.39 E-value=52 Score=30.75 Aligned_cols=51 Identities=24% Similarity=0.442 Sum_probs=0.0
Q ss_pred CcEEEEcccCCcCCCCC-------------------CHHHHHHHHHH-HHHHHHHHHHc-----------CCce--eeee
Q 048104 204 KPLVFSEFGKSCKEAGF-------------------SINVRDSFLNT-IYMNIYNLARN-----------GGAI--GGGM 250 (316)
Q Consensus 204 KPvvi~EfG~~~~~~g~-------------------~~~~r~~~~~~-v~~~~~~~~~~-----------~~~~--~G~~ 250 (316)
|||.++|+|...-..|. +...|+.+++. .++.++..... +..+ ....
T Consensus 207 KpIwftE~GcpavDkgtNqPNvF~DpkSsEs~~P~~S~g~rDd~~Qr~~lea~~~~w~~~~~Np~S~~ygg~Mvd~~~~~ 286 (299)
T PF13547_consen 207 KPIWFTEYGCPAVDKGTNQPNVFLDPKSSESALPYFSNGARDDLIQRRYLEATLGYWDDPANNPVSPVYGGPMVDMERIF 286 (299)
T ss_pred cceEEEecCCchhcCcCCCCccccCcccccccCCCCCCCCccHHHHHHHHHHHHHHhcCcccCCcCcccCccccchhhce
Q ss_pred eecc
Q 048104 251 VWQL 254 (316)
Q Consensus 251 ~W~~ 254 (316)
+|+|
T Consensus 287 ~W~W 290 (299)
T PF13547_consen 287 VWAW 290 (299)
T ss_pred EEec
No 133
>COG2342 Predicted extracellular endo alpha-1,4 polygalactosaminidase or related polysaccharide hydrolase [Carbohydrate transport and metabolism]
Probab=31.93 E-value=2.7e+02 Score=26.08 Aligned_cols=72 Identities=13% Similarity=0.285 Sum_probs=39.5
Q ss_pred CCccCHHHHHHHHHHHHHHHhcccccccccccCCCcEEEEeecCCC-CCCCCCChHHHHHHHHHHHHHHHhcCCCCeEEE
Q 048104 49 DFYTNAIVKGYYKNHVKKVLTRINTITRIAYKDDPTIMAWELINEP-RCQADYSGKTLNNWVQEMASYVKSIDNKHLLEI 127 (316)
Q Consensus 49 ~fy~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd~PaI~aWeL~NEP-~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt~ 127 (316)
.|| +|+-++..+.+++.+..- -+-|+ |-| .|=+|.-.=+- +...........+|+.+++.++|..-|. ++.+
T Consensus 118 kYW-~~eWkdii~~~l~rL~d~--GfdGv-yLD--~VD~y~Y~~~~~~~~~~~~~k~m~~~i~~i~~~~ra~~~~-~~Vi 190 (300)
T COG2342 118 KYW-EPEWKDIIRSYLDRLIDQ--GFDGV-YLD--VVDAYWYVEWNDRETGVNAAKKMVKFIAAIAEYARAANPL-FRVI 190 (300)
T ss_pred ecc-CHHHHHHHHHHHHHHHHc--cCceE-EEe--eechHHHHHHhcccccccHHHHHHHHHHHHHHHHHhcCCc-EEEE
Confidence 344 456677777777777664 33333 222 22223100000 0111112356889999999999999999 5544
No 134
>PF01373 Glyco_hydro_14: Glycosyl hydrolase family 14; InterPro: IPR001554 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 14 GH14 from CAZY comprises enzymes with only one known activity; beta-amylase (3.2.1.2 from EC). A Glu residue has been proposed as a catalytic residue, but it is not known if it is the nucleophile or the proton donor. Beta-amylase [, ] is an enzyme that hydrolyses 1,4-alpha-glucosidic linkages in starch-type polysaccharide substrates so as to remove successive maltose units from the non-reducing ends of the chains. Beta-amylase is present in certain bacteria as well as in plants. Three highly conserved sequence regions are found in all known beta-amylases. The first of these regions is located in the N-terminal section of the enzymes and contains an aspartate which is known [] to be involved in the catalytic mechanism. The second, located in a more central location, is centred around a glutamate which is also involved [] in the catalytic mechanism. The 3D structure of a complex of soybean beta-amylase with an inhibitor (alpha-cyclodextrin) has been determined to 3.0A resolution by X-ray diffraction []. The enzyme folds into large and small domains: the large domain has a (beta alpha)8 super-secondary structural core, while the smaller is formed from two long loops extending from the beta-3 and beta-4 strands of the (beta alpha)8 fold []. The interface of the two domains, together with shorter loops from the (beta alpha)8 core, form a deep cleft, in which the inhibitor binds []. Two maltose molecules also bind in the cleft, one sharing a binding site with alpha-cyclodextrin, and the other sitting more deeply in the cleft [].; GO: 0016161 beta-amylase activity, 0000272 polysaccharide catabolic process; PDB: 1FA2_A 2DQX_A 1WDP_A 1UKP_C 1BYC_A 1BYA_A 1Q6C_A 1V3I_A 1BTC_A 1BYB_A ....
Probab=31.25 E-value=24 Score=34.53 Aligned_cols=80 Identities=16% Similarity=0.296 Sum_probs=42.7
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCCCc-h-----hhhHHHHhcCC--CC--C---------CCCCCccCHHHHHHHHH
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHDFGGR-P-----QYVNWARAAGA--SV--N---------SDDDFYTNAIVKGYYKN 62 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~~Gg~-~-----~y~~w~~~~G~--~~--~---------~~~~fy~d~~~~~~~~~ 62 (316)
-+.+++.+++.|||+.+.|. .+.+||. . .-+.|..+.|. ++ . ..+-.+...+ ++.|.+
T Consensus 55 Y~~l~~~vr~~GLk~~~vms--fH~cGgNvgD~~~IpLP~Wv~~~~~~~di~ytd~~G~rn~E~lSp~~~grt-~~~Y~d 131 (402)
T PF01373_consen 55 YRELFEMVRDAGLKLQVVMS--FHQCGGNVGDDCNIPLPSWVWEIGKKDDIFYTDRSGNRNKEYLSPVLDGRT-LQCYSD 131 (402)
T ss_dssp HHHHHHHHHHTT-EEEEEEE---S-BSSSTTSSSEB-S-HHHHHHHHHSGGEEE-TTS-EEEEEE-CTBTTBC-HHHHHH
T ss_pred HHHHHHHHHHcCCeEEEEEe--eecCCCCCCCccCCcCCHHHHhccccCCcEEECCCCCcCcceeecccCCch-HHHHHH
Confidence 47899999999999977652 2344543 0 13567643221 10 0 0112233334 889999
Q ss_pred HHHHHHhcccccccccccCC-CcEEEEeecC
Q 048104 63 HVKKVLTRINTITRIAYKDD-PTIMAWELIN 92 (316)
Q Consensus 63 ~v~~vv~R~N~~tg~~ykd~-PaI~aWeL~N 92 (316)
+++.+..+ |++- .+|..-+++=
T Consensus 132 fm~sF~~~--------f~~~~~~I~~I~vgl 154 (402)
T PF01373_consen 132 FMRSFRDN--------FSDYLSTITEIQVGL 154 (402)
T ss_dssp HHHHHHHH--------CHHHHTGEEEEEE--
T ss_pred HHHHHHHH--------HHHHHhhheEEEecc
Confidence 99999888 4432 3555555543
No 135
>PLN02429 triosephosphate isomerase
Probab=31.14 E-value=2e+02 Score=27.36 Aligned_cols=19 Identities=21% Similarity=0.279 Sum_probs=15.6
Q ss_pred HHHHHH----HHHCCCeEEEeCC
Q 048104 3 DFVTSE----ARKYGIRLILSLS 21 (316)
Q Consensus 3 D~~l~~----A~k~gi~vil~L~ 21 (316)
|.+|.. |.++||.+|+|.-
T Consensus 166 d~~V~~Kv~~al~~GL~pIvCIG 188 (315)
T PLN02429 166 DEFIGKKAAYALSEGLGVIACIG 188 (315)
T ss_pred HHHHHHHHHHHHHCcCEEEEEcC
Confidence 566666 9999999999873
No 136
>TIGR03272 methan_mark_6 putative methanogenesis marker protein 6. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=30.77 E-value=44 Score=27.45 Aligned_cols=21 Identities=19% Similarity=0.363 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHhcCCCCeEEE
Q 048104 107 NWVQEMASYVKSIDNKHLLEI 127 (316)
Q Consensus 107 ~w~~e~a~~Iks~Dp~hlVt~ 127 (316)
.-+.+++..||.+||+|+.+=
T Consensus 41 e~V~~~v~~iR~ld~~~IF~K 61 (132)
T TIGR03272 41 EEVMKVAERIRELDPNHIFVK 61 (132)
T ss_pred HHHHHHHHHHHhhCCCceEee
Confidence 447899999999999998754
No 137
>PRK14567 triosephosphate isomerase; Provisional
Probab=30.54 E-value=1.4e+02 Score=27.37 Aligned_cols=16 Identities=6% Similarity=0.059 Sum_probs=13.1
Q ss_pred HHHHHHHCCCeEEEeC
Q 048104 5 VTSEARKYGIRLILSL 20 (316)
Q Consensus 5 ~l~~A~k~gi~vil~L 20 (316)
-+..|.+.||.+|++.
T Consensus 110 Kv~~al~~gl~pI~Ci 125 (253)
T PRK14567 110 KLNKIIDTTITPVVCI 125 (253)
T ss_pred HHHHHHHCCCEEEEEc
Confidence 4567889999999987
No 138
>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate. XylS has been characterized in Sulfolobus solfataricus where it hydrolyzes isoprimeverose, the p-nitrophenyl-beta derivative of isoprimeverose, and xyloglucan oligosaccharides, and has transxylosidic activity. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The XylS family corresponds to subgroup 3 in the Ernst et al classification of GH31 enzymes.
Probab=29.98 E-value=2.7e+02 Score=26.20 Aligned_cols=82 Identities=18% Similarity=0.274 Sum_probs=45.2
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHh-------cCCC----CCCCCCC--ccCHHHHHHHHHHHHHHHh
Q 048104 3 DFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARA-------AGAS----VNSDDDF--YTNAIVKGYYKNHVKKVLT 69 (316)
Q Consensus 3 D~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~-------~G~~----~~~~~~f--y~d~~~~~~~~~~v~~vv~ 69 (316)
..+|++.+++|+||++.++..=. -+...|..-... .|.. ......+ |++|++++.+.+.++..+.
T Consensus 69 ~~mi~~L~~~G~kv~~~i~P~v~--~~~~~y~e~~~~g~~v~~~~g~~~~~~w~g~~~~~Dftnp~a~~w~~~~~~~~~~ 146 (319)
T cd06591 69 KAMVRELHEMNAELMISIWPTFG--PETENYKEMDEKGYLIKTDRGPRVTMQFGGNTRFYDATNPEAREYYWKQLKKNYY 146 (319)
T ss_pred HHHHHHHHHCCCEEEEEecCCcC--CCChhHHHHHHCCEEEEcCCCCeeeeeCCCCccccCCCCHHHHHHHHHHHHHHhh
Confidence 56899999999999996643210 011122221110 0100 0011112 6899999998887765443
Q ss_pred cccccccccccCCCcEEEEeecCCCCCC
Q 048104 70 RINTITRIAYKDDPTIMAWELINEPRCQ 97 (316)
Q Consensus 70 R~N~~tg~~ykd~PaI~aWeL~NEP~~~ 97 (316)
. ...-.-|-=+|||...
T Consensus 147 ~-----------~Gvdg~w~D~~Ep~~~ 163 (319)
T cd06591 147 D-----------KGVDAWWLDAAEPEYS 163 (319)
T ss_pred c-----------CCCcEEEecCCCCCcc
Confidence 2 2333567788888753
No 139
>TIGR03212 uraD_N-term-dom putative urate catabolism protein. This model represents a protein that is predominantly found just upstream of the UraD protein (OHCU decarboxylase) and in a number of instances as a N-terminal fusion with it. UraD itself catalyzes the last step in the catabolism of urate to allantoate. The function of this protein is presently unknown. It shows homology with the pfam01522 polysaccharide deacetylase domain family.
Probab=29.28 E-value=2.3e+02 Score=26.61 Aligned_cols=54 Identities=11% Similarity=0.142 Sum_probs=28.0
Q ss_pred CccCHHHHHHHHHHHHHHHhcccccccccccCCCcEEEEeecCCCCCCC---CCChHHHHHHHHHHHHHHHhc
Q 048104 50 FYTNAIVKGYYKNHVKKVLTRINTITRIAYKDDPTIMAWELINEPRCQA---DYSGKTLNNWVQEMASYVKSI 119 (316)
Q Consensus 50 fy~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd~PaI~aWeL~NEP~~~~---~~~~~~~~~w~~e~a~~Iks~ 119 (316)
||-.....+.+-+.++.|+++ ++||+|==-... .-+.+...+.+.+..+.|+++
T Consensus 95 ffv~g~~~e~~P~~v~~i~~~----------------GHEIg~Hg~~H~~~~~ls~~~e~~~i~~s~~~i~~~ 151 (297)
T TIGR03212 95 VFGVAMALARNPEAVAAMKEA----------------GWEIASHGLRWIDYQDMDEAQEREHIAEAIRLHTEV 151 (297)
T ss_pred EEeEHHHHHHCHHHHHHHHHc----------------CCEEeeccccCcccccCCHHHHHHHHHHHHHHHHHH
Confidence 343444445566667777777 555554211110 012345566666666666664
No 140
>PF00121 TIM: Triosephosphate isomerase; InterPro: IPR000652 Triosephosphate isomerase (5.3.1.1 from EC) (TIM) [] is the glycolytic enzyme that catalyses the reversible interconversion of glyceraldehyde 3-phosphate and dihydroxyacetone phosphate. TIM plays an important role in several metabolic pathways and is essential for efficient energy production. It is present in eukaryotes as well as in prokaryotes. TIM is a dimer of identical subunits, each of which is made up of about 250 amino-acid residues. A glutamic acid residue is involved in the catalytic mechanism [, ]. The tertiary structure of TIM has eight beta/alpha motifs folded into a barrel structure. The TIM barrel fold occurs ubiquitously and is found in numerous other enzymes that can be involved in energy metabolism, macromolecule metabolism, or small molecule metabolism []. The sequence around the active site residue is perfectly conserved in all known TIM's. Deficiencies in TIM are associated with haemolytic anaemia coupled with a progressive, severe neurological disorder [].; GO: 0004807 triose-phosphate isomerase activity, 0008152 metabolic process; PDB: 2YPI_A 1YPI_A 1NEY_B 1NF0_B 1I45_A 7TIM_A 3YPI_B 2H6R_H 2Y63_A 1N55_A ....
Probab=28.55 E-value=57 Score=29.74 Aligned_cols=18 Identities=17% Similarity=0.189 Sum_probs=13.9
Q ss_pred HHHHHHHHCCCeEEEeCC
Q 048104 4 FVTSEARKYGIRLILSLS 21 (316)
Q Consensus 4 ~~l~~A~k~gi~vil~L~ 21 (316)
.-+..|.++||.+|+|.-
T Consensus 108 ~Kv~~al~~gl~pIvCvG 125 (244)
T PF00121_consen 108 KKVKAALENGLTPIVCVG 125 (244)
T ss_dssp HHHHHHHHTT-EEEEEES
T ss_pred HHHHHHHHCCCEEEEEec
Confidence 346789999999999874
No 141
>PTZ00333 triosephosphate isomerase; Provisional
Probab=28.19 E-value=2.4e+02 Score=25.84 Aligned_cols=18 Identities=22% Similarity=0.407 Sum_probs=14.3
Q ss_pred HHHHHHHHCCCeEEEeCC
Q 048104 4 FVTSEARKYGIRLILSLS 21 (316)
Q Consensus 4 ~~l~~A~k~gi~vil~L~ 21 (316)
.-+..|.++||.+|+|.-
T Consensus 113 ~Kv~~al~~gl~pIlCvG 130 (255)
T PTZ00333 113 QKVKNALENGLKVILCIG 130 (255)
T ss_pred HHHHHHHHCCCEEEEEcC
Confidence 346678999999999873
No 142
>cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end. GLases cleave the bond between C1 and O1 of the nonreducing sugar residue of alpha-glucans to generate a monosaccharide product with a double bond between C1 and C2. This family corresponds to subgroup 2 in the Ernst et al classification of GH31 enzymes.
Probab=27.36 E-value=2.1e+02 Score=27.21 Aligned_cols=72 Identities=14% Similarity=0.309 Sum_probs=44.9
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhcCCCCCCCCCCccCHHHHHHHHHHHHHHHhcccccccccccCC
Q 048104 3 DFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAGASVNSDDDFYTNAIVKGYYKNHVKKVLTRINTITRIAYKDD 82 (316)
Q Consensus 3 D~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~G~~~~~~~~fy~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd~ 82 (316)
..++++.++.|+|+++-.+..=. +|. .|.+ .+ .--+ |++|++++++.+..+.+..- |+.
T Consensus 67 ~~mv~~L~~~G~klv~~i~P~i~-~g~-----~~~~-~~----~~pD-ftnp~ar~wW~~~~~~l~~~-----Gv~---- 125 (332)
T cd06601 67 KEMFDNLHNKGLKCSTNITPVIS-YGG-----GLGS-PG----LYPD-LGRPDVREWWGNQYKYLFDI-----GLE---- 125 (332)
T ss_pred HHHHHHHHHCCCeEEEEecCcee-cCc-----cCCC-Cc----eeeC-CCCHHHHHHHHHHHHHHHhC-----CCc----
Confidence 46889999999999987643211 111 1110 01 1113 57899999888887766542 332
Q ss_pred CcEEEEeecCCCCCCC
Q 048104 83 PTIMAWELINEPRCQA 98 (316)
Q Consensus 83 PaI~aWeL~NEP~~~~ 98 (316)
.-|-=+|||....
T Consensus 126 ---~~W~DmnEp~~~~ 138 (332)
T cd06601 126 ---FVWQDMTTPAIMP 138 (332)
T ss_pred ---eeecCCCCccccc
Confidence 3688899998653
No 143
>KOG2233 consensus Alpha-N-acetylglucosaminidase [Intracellular trafficking, secretion, and vesicular transport]
Probab=27.00 E-value=1.8e+02 Score=29.46 Aligned_cols=67 Identities=7% Similarity=0.111 Sum_probs=50.9
Q ss_pred cCHHHHHHHHHHHHHHHhcccccccccccCCCcEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCeEEE
Q 048104 52 TNAIVKGYYKNHVKKVLTRINTITRIAYKDDPTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLLEI 127 (316)
Q Consensus 52 ~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd~PaI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt~ 127 (316)
+||-.++-=..+++++++. |+....|..-|-.||...... .++-+..-...+....|.+|++..=.+
T Consensus 214 ~dplF~eIgs~Flr~~~ke--------fG~~tniy~~DpFNE~~Pp~s-epey~~staaAiyesm~kvdknaVWll 280 (666)
T KOG2233|consen 214 FDPLFQEIGSTFLRHQIKE--------FGGVTNIYSADPFNEILPPES-EPEYVKSTAAAIYESMKKVDKNAVWLL 280 (666)
T ss_pred CcchHHHHHHHHHHHHHHH--------hCCcccccccCcccccCCCCC-ChHHHHHHHHHHHHHHhccCcceEEee
Confidence 4777788888889999999 999999999999999876532 233444555566677789999975544
No 144
>PF13899 Thioredoxin_7: Thioredoxin-like; PDB: 2LST_A 3PH9_A 1UC7_A 2JU5_A 1VRS_D 2FWG_A 2FWF_A 2FWH_A 2FWE_A 3FK8_A ....
Probab=26.69 E-value=63 Score=23.51 Aligned_cols=23 Identities=17% Similarity=0.390 Sum_probs=20.4
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCC
Q 048104 2 LDFVTSEARKYGIRLILSLSNNY 24 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w 24 (316)
++..+++|++.|-.|++.++..|
T Consensus 6 ~~~al~~A~~~~kpvlv~f~a~w 28 (82)
T PF13899_consen 6 YEEALAEAKKEGKPVLVDFGADW 28 (82)
T ss_dssp HHHHHHHHHHHTSEEEEEEETTT
T ss_pred HHHHHHHHHHcCCCEEEEEECCC
Confidence 68899999999999999997654
No 145
>KOG2566 consensus Beta-glucocerebrosidase [Carbohydrate transport and metabolism]
Probab=26.40 E-value=6.4e+02 Score=24.95 Aligned_cols=172 Identities=19% Similarity=0.288 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHhcccccccccccCCCcEEEEee--cCCCCCCCCC---------ChHHHHHHHHH-HHHHHHhcCCC
Q 048104 55 IVKGYYKNHVKKVLTRINTITRIAYKDDPTIMAWEL--INEPRCQADY---------SGKTLNNWVQE-MASYVKSIDNK 122 (316)
Q Consensus 55 ~~~~~~~~~v~~vv~R~N~~tg~~ykd~PaI~aWeL--~NEP~~~~~~---------~~~~~~~w~~e-~a~~Iks~Dp~ 122 (316)
.+-+.|.+|+-++++. |..+ .|..|.| .|||....+. +++.-+++++. +..++++--..
T Consensus 226 ~yhqtya~YfvkFlea--------Y~~~-gi~FWglt~qNEPstG~d~~~k~Qtl~ftae~qRdFik~dLGPaLa~s~~~ 296 (518)
T KOG2566|consen 226 IYHQTYARYFVKFLEA--------YAKH-GIQFWGLTTQNEPSTGSDKKWKWQTLGFTAETQRDFIKKDLGPALASSKTT 296 (518)
T ss_pred hhHHHHHHHHHHHHHH--------HHhc-CceEEeecccCCCCcCcccCCceeecccCHHHHHHHHHHhcchhhhcCCcC
Confidence 4455666666666776 7666 5667876 6999876542 23444555443 23444432111
Q ss_pred C--eEEEcccCccCCCCCCcCCCCCCCCcccchhhccCCCCceEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHHHhhh
Q 048104 123 H--LLEIGLEGFYGDSIPDKKQFNPGYQVGTDFISNNMIKEIDFTTIHAYPDQWLPGKNYYAQMQFVQKWLESHWTDSKT 200 (316)
Q Consensus 123 h--lVt~G~eG~~~~~~~~~~~~np~~~~g~d~~~~~~~~~iD~~t~H~Yp~~w~~~~~~~~~~~~~~~~i~~~~~~a~~ 200 (316)
+ -|.+=..+ + ..-|.. ..+-+....+.+.++=+.+|.|-+--.+. .|+.+..+
T Consensus 297 knvkllilDD~--------R-g~LP~W-adtvlnDpeAakYv~GIaVHwY~df~~pa---------------~~L~eTh~ 351 (518)
T KOG2566|consen 297 KNVKLLILDDQ--------R-GLLPHW-ADTVLNDPEAAKYVHGIAVHWYQDFLEPA---------------KHLDETHR 351 (518)
T ss_pred CceEEEEecCC--------c-cCCCcc-chhhccChhhhhhccceEEEeeccccChh---------------hhhhhHHh
Confidence 1 11221111 0 111210 00112233456778888999998742221 13332222
Q ss_pred -cCCCcEEEEcccCCcC---CCCCCHHHHH-HHHHHHHHHHHHHHHcCCceeeeeeecccc--CCCCCCCCCc
Q 048104 201 -ILKKPLVFSEFGKSCK---EAGFSINVRD-SFLNTIYMNIYNLARNGGAIGGGMVWQLMA--EGMQPYFDGY 266 (316)
Q Consensus 201 -~~~KPvvi~EfG~~~~---~~g~~~~~r~-~~~~~v~~~~~~~~~~~~~~~G~~~W~~~~--~g~~~~~dg~ 266 (316)
..++=++=+|--.-.. +..+..=.|+ +|-.++.+-+-. -..||.=|.+.- .|-++|-++|
T Consensus 352 ~hP~~fifgTEAc~Gy~~~d~v~~Gswdrae~yasdii~dlnn------~vtGWtdwNl~Ld~~GGP~wv~nf 418 (518)
T KOG2566|consen 352 KHPNTFIFGTEACAGYKSKDGVDLGSWDRAEQYASDIITDLNN------HVTGWTDWNLILDAQGGPNWVSNF 418 (518)
T ss_pred hCCCeEEEeehhccccccccCccccchhhHHHHHHHHHHhhhh------hccceeeeeeEecCcCCchhHhcc
Confidence 1233344445332111 1111111232 444444443322 278999999874 4668897777
No 146
>PF03644 Glyco_hydro_85: Glycosyl hydrolase family 85 ; InterPro: IPR005201 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This group of endo-beta-N-acetylglucosaminidases belong to the glycoside hydrolase family 85 (GH85 from CAZY). These enzymes work on a broad spectrum of substrates.; GO: 0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity, 0005737 cytoplasm; PDB: 2W92_A 2W91_A 2VTF_B 3FHQ_B 3FHA_D 3GDB_A.
Probab=26.28 E-value=1.1e+02 Score=28.96 Aligned_cols=93 Identities=11% Similarity=0.180 Sum_probs=52.3
Q ss_pred HHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhcCCCCCCCCCCcc-CHHHHHHHHHHHHHHHhcccccccccccCCC
Q 048104 5 VTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAGASVNSDDDFYT-NAIVKGYYKNHVKKVLTRINTITRIAYKDDP 83 (316)
Q Consensus 5 ~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~G~~~~~~~~fy~-d~~~~~~~~~~v~~vv~R~N~~tg~~ykd~P 83 (316)
.++.|+|+|++|+=+++-.|. ++. .|... +.. ++.-...+.+.+-+|+.. |+=|-
T Consensus 47 widaAHrnGV~vLGTiife~~--~~~----~~~~~----------ll~~~~~g~~~~A~kLi~ia~~--------yGFDG 102 (311)
T PF03644_consen 47 WIDAAHRNGVKVLGTIIFEWG--GGA----EWCEE----------LLEKDEDGSFPYADKLIEIAKY--------YGFDG 102 (311)
T ss_dssp HHHHHHHTT--EEEEEEEEEE----H----HHHHH----------HT---TTS--HHHHHHHHHHHH--------HT--E
T ss_pred hHHHHHhcCceEEEEEEecCC--chH----HHHHH----------HHcCCcccccHHHHHHHHHHHH--------cCCCc
Confidence 578999999999988765442 222 23321 112 222233455667788887 88774
Q ss_pred cEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCeEE
Q 048104 84 TIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLLE 126 (316)
Q Consensus 84 aI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt 126 (316)
-.+=+|....+. ...+.+..|++++.+..++ .|+..|.
T Consensus 103 w~iN~E~~~~~~----~~~~~l~~F~~~l~~~~~~-~~~~~v~ 140 (311)
T PF03644_consen 103 WLINIETPLSGP----EDAENLIDFLKYLRKEAHE-NPGSEVI 140 (311)
T ss_dssp EEEEEEESSTTG----GGHHHHHHHHHHHHHHHHH-T-T-EEE
T ss_pred eEEEecccCCch----hHHHHHHHHHHHHHHHhhc-CCCcEEE
Confidence 444444433321 1357899999999999999 8877664
No 147
>cd02873 GH18_IDGF The IDGF's (imaginal disc growth factors) are a family of growth factors identified in insects that include at least five members, some of which are encoded by genes in a tight cluster. The IDGF's have an eight-stranded alpha/beta barrel fold and are related to the glycosyl hydrolase family 18 (GH18) chitinases, but they have an amino acid substitution known to abolish chitinase catalytic activity. IDGFs may have evolved from chitinases to gain new functions as growth factors, interacting with cell surface glycoproteins involved in growth-promoting processes.
Probab=26.14 E-value=6.3e+02 Score=24.72 Aligned_cols=70 Identities=17% Similarity=0.260 Sum_probs=44.8
Q ss_pred CCccCHHHHHHHHHHHHHHHhcccccccccccCCCcEEEEeecCCC----CC---------------------CCCCChH
Q 048104 49 DFYTNAIVKGYYKNHVKKVLTRINTITRIAYKDDPTIMAWELINEP----RC---------------------QADYSGK 103 (316)
Q Consensus 49 ~fy~d~~~~~~~~~~v~~vv~R~N~~tg~~ykd~PaI~aWeL~NEP----~~---------------------~~~~~~~ 103 (316)
.+..+++.|+.|.+-+..++.+ |+=|---+-||--+-+ +. ......+
T Consensus 98 ~~~~~~~~R~~Fi~siv~~l~~--------~~fDGidiDWEyP~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~ 169 (413)
T cd02873 98 LLLESSESRNAFINSAHSLLKT--------YGFDGLDLAWQFPKNKPKKVRGTFGSAWHSFKKLFTGDSVVDEKAAEHKE 169 (413)
T ss_pred HHhCCHHHHHHHHHHHHHHHHH--------cCCCCeEeeeeCCCCcccccccccchhhhhhhcccccccccCCCChhHHH
Confidence 4467899999999888888888 6666666778843211 00 0111245
Q ss_pred HHHHHHHHHHHHHHhcCCCCeEEEc
Q 048104 104 TLNNWVQEMASYVKSIDNKHLLEIG 128 (316)
Q Consensus 104 ~~~~w~~e~a~~Iks~Dp~hlVt~G 128 (316)
.+..+++|+...+++. .-++++.
T Consensus 170 nf~~Ll~elr~~l~~~--~~~ls~a 192 (413)
T cd02873 170 QFTALVRELKNALRPD--GLLLTLT 192 (413)
T ss_pred HHHHHHHHHHHHhccc--CcEEEEE
Confidence 6888888888877652 2345553
No 148
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=25.82 E-value=2.7e+02 Score=26.28 Aligned_cols=65 Identities=15% Similarity=0.013 Sum_probs=40.1
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhcCCCC-----------CCCCCCccCHHHHHHHHHHHHHHHhc
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAGASV-----------NSDDDFYTNAIVKGYYKNHVKKVLTR 70 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~G~~~-----------~~~~~fy~d~~~~~~~~~~v~~vv~R 70 (316)
+-.+++-|++|||.||+-+ +..|.+.........-+... ....--.++|+..+..++.++.++.-
T Consensus 70 i~elv~yA~~rgI~vIPEI----d~PGH~~a~~~~ypel~~~~~~~~~~~~~~~~~~~l~~~~p~t~~f~~~l~~E~~~l 145 (311)
T cd06570 70 IREVVAYARDRGIRVVPEI----DVPGHASAIAVAYPELASGPGPYVIERGWGVFEPLLDPTNEETYTFLDNLFGEMAEL 145 (311)
T ss_pred HHHHHHHHHHcCCEEEEee----cCccchHHHHHhCHHhccCCCccccccccccCCCccCCCChhHHHHHHHHHHHHHHh
Confidence 3468999999999999977 34565543222111100000 00111356889999999999999886
No 149
>PF00332 Glyco_hydro_17: Glycosyl hydrolases family 17; InterPro: IPR000490 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 17 GH17 from CAZY comprises enzymes with several known activities; endo-1,3-beta-glucosidase (3.2.1.39 from EC); lichenase (3.2.1.73 from EC); exo-1,3-glucanase (3.2.1.58 from EC). Currently these enzymes have only been found in plants and in fungi. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1AQ0_B 1GHR_A 1GHS_B 2CYG_A 3UR8_A 3UR7_B 3EM5_C 3F55_D.
Probab=25.70 E-value=53 Score=31.02 Aligned_cols=33 Identities=15% Similarity=0.213 Sum_probs=17.6
Q ss_pred CCCcEEEEcccCCcCCC-CCCHHHHHHHHHHHHH
Q 048104 202 LKKPLVFSEFGKSCKEA-GFSINVRDSFLNTIYM 234 (316)
Q Consensus 202 ~~KPvvi~EfG~~~~~~-g~~~~~r~~~~~~v~~ 234 (316)
-++||+|+|.|++..+. +.+.+....|.+.+..
T Consensus 226 ~~~~vvv~ETGWPs~G~~~a~~~nA~~~~~nl~~ 259 (310)
T PF00332_consen 226 PNVPVVVGETGWPSAGDPGATPENAQAYNQNLIK 259 (310)
T ss_dssp TT--EEEEEE---SSSSTTCSHHHHHHHHHHHHH
T ss_pred CCceeEEeccccccCCCCCCCcchhHHHHHHHHH
Confidence 35799999999998753 2355555566555443
No 150
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=25.66 E-value=1.1e+02 Score=23.57 Aligned_cols=39 Identities=13% Similarity=0.217 Sum_probs=29.4
Q ss_pred CCCcEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCeEEEcc
Q 048104 81 DDPTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLLEIGL 129 (316)
Q Consensus 81 d~PaI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt~G~ 129 (316)
..|.+++......+.. .-..++++.+|+.+|+.+|.+|.
T Consensus 50 ~~pd~V~iS~~~~~~~----------~~~~~l~~~~k~~~p~~~iv~GG 88 (121)
T PF02310_consen 50 ERPDVVGISVSMTPNL----------PEAKRLARAIKERNPNIPIVVGG 88 (121)
T ss_dssp TTCSEEEEEESSSTHH----------HHHHHHHHHHHTTCTTSEEEEEE
T ss_pred CCCcEEEEEccCcCcH----------HHHHHHHHHHHhcCCCCEEEEEC
Confidence 3788999877633222 33578888899999999999985
No 151
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=25.14 E-value=99 Score=30.14 Aligned_cols=64 Identities=14% Similarity=0.199 Sum_probs=36.0
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHH------Hhc---------CCCC---CCCCCCccCHHHHHHHHHH
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWA------RAA---------GASV---NSDDDFYTNAIVKGYYKNH 63 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~------~~~---------G~~~---~~~~~fy~d~~~~~~~~~~ 63 (316)
|-.+.+.|+|||++||-+=+..--.++|...+ .++ .+. ..++ .-..-+..|++.|+.|.+.
T Consensus 180 L~~i~elc~kh~v~VISDEIHaDlv~~g~~h~-~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~~~~ 258 (388)
T COG1168 180 LRKIAELCLRHGVRVISDEIHADLVLGGHKHI-PFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFLKR 258 (388)
T ss_pred HHHHHHHHHHcCCEEEeecccccccccCCCcc-chhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHHHHHHHH
Confidence 45788999999999998843321123443221 111 000 0001 1123456899998888777
Q ss_pred HHH
Q 048104 64 VKK 66 (316)
Q Consensus 64 v~~ 66 (316)
++.
T Consensus 259 l~~ 261 (388)
T COG1168 259 LKR 261 (388)
T ss_pred HHH
Confidence 653
No 152
>PF02156 Glyco_hydro_26: Glycosyl hydrolase family 26; InterPro: IPR022790 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 26 GH26 from CAZY encompasses mainly mannan endo-1,4-beta-mannosidases (3.2.1.78 from EC). Mannan endo-1,4-beta-mannosidase hydrolyses mannan and galactomannan, but displays little activity towards other plant cell wall polysaccharides []. The enzyme randomly hydrolyses 1,4-beta-D-linkages in mannans, galacto-mannans, glucomannans and galactoglucomannans. This entry also incoporates the enzyme Endogluconase H 3.2.1.4 from EC catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans. ; GO: 0008810 cellulase activity, 0016985 mannan endo-1,4-beta-mannosidase activity, 0006080 substituted mannan metabolic process; PDB: 2QHA_A 3CBW_A 2WHK_A 2VI0_A 2BVD_A 2BV9_A 2CIT_A 2V3G_A 2CIP_A 2X2Y_B ....
Probab=24.59 E-value=5.1e+02 Score=24.48 Aligned_cols=79 Identities=16% Similarity=0.324 Sum_probs=46.7
Q ss_pred ccCCCcEEEEeecCCCCCC----CCC---ChHHHHHHHHHHHHHHHhcCC-CCeEEE-cccCccCCCCCCcCCCCCCCCc
Q 048104 79 YKDDPTIMAWELINEPRCQ----ADY---SGKTLNNWVQEMASYVKSIDN-KHLLEI-GLEGFYGDSIPDKKQFNPGYQV 149 (316)
Q Consensus 79 ykd~PaI~aWeL~NEP~~~----~~~---~~~~~~~w~~e~a~~Iks~Dp-~hlVt~-G~eG~~~~~~~~~~~~np~~~~ 149 (316)
.++...=+-|-...|.+.. +.. +++.+.+..+.|..++|..-. +.||-+ ...+... ....+.||
T Consensus 146 l~~~~vPVl~Rp~HE~nG~WfwWg~~~~~~~~~y~~lwr~~~~~l~~~~g~~Nliwvw~~~~~~~----~~~~yYPG--- 218 (311)
T PF02156_consen 146 LKDAGVPVLFRPFHEMNGGWFWWGAKGHCTPEQYKALWRHMVDYLRNVKGLHNLIWVWSPNGSRD----DAAEYYPG--- 218 (311)
T ss_dssp HHCTTS-EEEEESTSTTSSSSTTSTTSTCHHHHHHHHHHHHHHHHHTTST-TSEEEEE-EBTTSS----CTCTT------
T ss_pred hhcCCCeEEEeehhhcCCCccccCCCCCCCHHHHHHHHHHHHHHHHhccCCceEEEEecCCCCCC----CccccCCC---
Confidence 5655444568899998742 111 267788889999999997544 567755 2211111 11234554
Q ss_pred ccchhhccCCCCceEEEeecCCCC
Q 048104 150 GTDFISNNMIKEIDFTTIHAYPDQ 173 (316)
Q Consensus 150 g~d~~~~~~~~~iD~~t~H~Yp~~ 173 (316)
...||++.+-.|+..
T Consensus 219 ---------D~yVDivG~D~Y~~~ 233 (311)
T PF02156_consen 219 ---------DDYVDIVGVDVYNDD 233 (311)
T ss_dssp ---------TTT-SEEEEEEEEST
T ss_pred ---------CCeEEEEEEeCCCCC
Confidence 467999999999873
No 153
>KOG3517 consensus Transcription factor PAX1/9 [Transcription]
Probab=24.35 E-value=50 Score=30.19 Aligned_cols=15 Identities=47% Similarity=0.979 Sum_probs=11.6
Q ss_pred ccC-CCcEEEEeecCC
Q 048104 79 YKD-DPTIMAWELINE 93 (316)
Q Consensus 79 ykd-~PaI~aWeL~NE 93 (316)
||. ||-|||||+-.-
T Consensus 90 ~Kq~DPGIFAWEIRDR 105 (334)
T KOG3517|consen 90 LKQRDPGIFAWEIRDR 105 (334)
T ss_pred hhccCCceeeehhhhh
Confidence 444 999999997654
No 154
>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism]
Probab=24.23 E-value=6.4e+02 Score=27.14 Aligned_cols=117 Identities=17% Similarity=0.252 Sum_probs=65.0
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhcCCCC-------------CCCCCC--ccCHHHHHHHHH-HHH
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAGASV-------------NSDDDF--YTNAIVKGYYKN-HVK 65 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~G~~~-------------~~~~~f--y~d~~~~~~~~~-~v~ 65 (316)
.+.+++..++.|||+|+-+.-.=..-. +.|.. +...|.-+ +....| |+||++++++.+ ..+
T Consensus 323 pk~mi~~l~~~Gikl~~~i~P~i~~d~--~~~~e-~~~~Gy~~k~~~g~~~~~~~w~~~~a~~DFtnp~~r~Ww~~~~~~ 399 (772)
T COG1501 323 PKQMIAELHEKGIKLIVIINPYIKQDS--PLFKE-AIEKGYFVKDPDGEIYQADFWPGNSAFPDFTNPDAREWWASDKKK 399 (772)
T ss_pred HHHHHHHHHhcCceEEEEeccccccCC--chHHH-HHHCCeEEECCCCCEeeecccCCcccccCCCCHHHHHHHHHHHHh
Confidence 357899999999999987632100000 11111 00111100 111222 689999999985 333
Q ss_pred HHHhcccccccccccCCCcEEEEeecCCCCCCCCC------ChHH-----HHHHHHHHHHHHHhcCCC-CeEEEcccCcc
Q 048104 66 KVLTRINTITRIAYKDDPTIMAWELINEPRCQADY------SGKT-----LNNWVQEMASYVKSIDNK-HLLEIGLEGFY 133 (316)
Q Consensus 66 ~vv~R~N~~tg~~ykd~PaI~aWeL~NEP~~~~~~------~~~~-----~~~w~~e~a~~Iks~Dp~-hlVt~G~eG~~ 133 (316)
.++. -.--.-|-=+|||...... ++.. ..-+.+-..+.+|+++|+ .++.+.-.|+-
T Consensus 400 ~l~d------------~Gv~g~W~D~nEp~~~~~~~~~~g~~~~~~~N~yp~~~~~a~~~~~~~~~~~~r~~~lsRsg~a 467 (772)
T COG1501 400 NLLD------------LGVDGFWNDMNEPEPFDGDGFGNGIDHEEMHNLYPLLYAKAVYEALKELGGNERPFILSRSGYA 467 (772)
T ss_pred HHHh------------cCccEEEccCCCCccccccccccccCHHHHhcchhHHHHHHHHHHHHhhcCCCceEEEEecccc
Confidence 3333 3344568889999876321 1122 223566778899999875 56666544443
No 155
>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus. Alpha-xylosidases catalyze the release of an alpha-xylose residue from the non-reducing end of alpha-xyloside substrates. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=23.68 E-value=3.3e+02 Score=25.21 Aligned_cols=84 Identities=17% Similarity=0.184 Sum_probs=46.4
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHHHhcCCCCCCCC---CCccCHHHHHHHHHHHHHHHhcccccccccc
Q 048104 3 DFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWARAAGASVNSDD---DFYTNAIVKGYYKNHVKKVLTRINTITRIAY 79 (316)
Q Consensus 3 D~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~~~~G~~~~~~~---~fy~d~~~~~~~~~~v~~vv~R~N~~tg~~y 79 (316)
..++++.++.|+|+++-++..=..-.....|.......+....... -=+++|++++.+.+.++..+.. .|+
T Consensus 77 ~~mi~~Lh~~G~k~v~~v~P~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~D~tnp~a~~~w~~~~~~~~~~----~Gi-- 150 (292)
T cd06595 77 EKLLQDLHDRGLKVTLNLHPADGIRAHEDQYPEMAKALGVDPATEGPILFDLTNPKFMDAYFDNVHRPLEK----QGV-- 150 (292)
T ss_pred HHHHHHHHHCCCEEEEEeCCCcccCCCcHHHHHHHHhcCCCcccCCeEEecCCCHHHHHHHHHHHHHHHHh----cCC--
Confidence 4688999999999999775421000122345554444333221111 1257899988776655544433 122
Q ss_pred cCCCcEEEEeecCCCCCC
Q 048104 80 KDDPTIMAWELINEPRCQ 97 (316)
Q Consensus 80 kd~PaI~aWeL~NEP~~~ 97 (316)
-.-|-=+|||...
T Consensus 151 -----dg~W~D~~E~~~~ 163 (292)
T cd06595 151 -----DFWWLDWQQGNRT 163 (292)
T ss_pred -----cEEEecCCCCccc
Confidence 2346668998643
No 156
>cd06544 GH18_narbonin Narbonin is a plant 2S protein from the globulin fraction of narbon bean (Vicia narbonensis L.) cotyledons with unknown function. Narbonin has a glycosyl hydrolase family 18 (GH18) domain without the conserved catalytic residues and with no known enzymatic activity. Narbonin amounts to up to 3% of the total seed globulins of mature seeds and was thought to be a storage protein but was found to degrade too slowly during germination. This family also includes the VfNOD32 nodulin from Vicia faba.
Probab=23.51 E-value=5.6e+02 Score=23.28 Aligned_cols=85 Identities=12% Similarity=0.194 Sum_probs=46.6
Q ss_pred HHHHHHHHHHhcccccccccccCCCcEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCeEEEcccCccCCCCC
Q 048104 59 YYKNHVKKVLTRINTITRIAYKDDPTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLLEIGLEGFYGDSIP 138 (316)
Q Consensus 59 ~~~~~v~~vv~R~N~~tg~~ykd~PaI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlVt~G~eG~~~~~~~ 138 (316)
.+.+-+..++.+ |+=|--=+-||- |.. +.+.+...++++...+|+ +.++++-...-....
T Consensus 100 ~fv~S~~~~l~~--------~~fDGiDiDwE~---~~~----d~~~f~~ll~~l~~~l~~---~~~lt~a~vap~~~~-- 159 (253)
T cd06544 100 NAVSSLTSIIQT--------YNLDGIDIDYEH---FPA----DPDTFVECIGQLITELKN---NGVIKVASIAPSEDA-- 159 (253)
T ss_pred HHHHHHHHHHHH--------hCCCceeeeccc---CCc----CHHHHHHHHHHHHHHhhh---cCCeEEEEecCCccc--
Confidence 334556677777 665544466773 211 245677777777777765 346665442211000
Q ss_pred CcCCCCCCCCcccchhh--ccCCCCceEEEeecCCCC
Q 048104 139 DKKQFNPGYQVGTDFIS--NNMIKEIDFTTIHAYPDQ 173 (316)
Q Consensus 139 ~~~~~np~~~~g~d~~~--~~~~~~iD~~t~H~Yp~~ 173 (316)
. +..+.. ....+.||++++.+|...
T Consensus 160 -----~-----~~~y~~~~~~~~d~id~~~~qfy~~~ 186 (253)
T cd06544 160 -----E-----QSHYLALYNAYGDYIDYVNYQFYNYG 186 (253)
T ss_pred -----c-----ccccHHHHHHhhCceeEEEhhhhCCC
Confidence 0 001111 123578999999999764
No 157
>TIGR02401 trehalose_TreY malto-oligosyltrehalose synthase. This enzyme, formally named (1-4)-alpha-D-glucan 1-alpha-D-glucosylmutase, is the TreY enzyme of the TreYZ pathway of trehalose biosynthesis, an alternative to the OtsAB pathway. Trehalose may be incorporated into more complex compounds but is best known as compatible solute. It is one of the most effective osmoprotectants, and unlike the various betaines does not require nitrogen for its synthesis.
Probab=22.74 E-value=75 Score=34.24 Aligned_cols=23 Identities=30% Similarity=0.437 Sum_probs=20.2
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCC
Q 048104 2 LDFVTSEARKYGIRLILSLSNNY 24 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w 24 (316)
|..++++|+++||+||+++.-|.
T Consensus 67 f~~Lv~aah~~Gm~vIlDiVpNH 89 (825)
T TIGR02401 67 LRRLSEAARARGLGLIVDIVPNH 89 (825)
T ss_pred HHHHHHHHHHCCCEEEEEecccc
Confidence 78899999999999999987543
No 158
>PRK14511 maltooligosyl trehalose synthase; Provisional
Probab=22.69 E-value=89 Score=33.93 Aligned_cols=23 Identities=30% Similarity=0.407 Sum_probs=20.2
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCC
Q 048104 2 LDFVTSEARKYGIRLILSLSNNY 24 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w 24 (316)
|..++++|+++||+||+++.-|.
T Consensus 71 f~~Lv~aah~~Gi~VIlDiV~NH 93 (879)
T PRK14511 71 LRRLAAALRAHGMGLILDIVPNH 93 (879)
T ss_pred HHHHHHHHHHCCCEEEEEecccc
Confidence 77899999999999999987543
No 159
>cd00019 AP2Ec AP endonuclease family 2; These endonucleases play a role in DNA repair. Cleave phosphodiester bonds at apurinic or apyrimidinic sites; the alignment also contains hexulose-6-phosphate isomerases, enzymes that catalyze the epimerization of D-arabino-6-hexulose 3-phosphate to D-fructose 6-phosphate, via cleaving the phosphoesterbond with the sugar.
Probab=22.21 E-value=3.5e+02 Score=24.41 Aligned_cols=53 Identities=9% Similarity=0.117 Sum_probs=30.5
Q ss_pred CHHHHHHHHHHHHHHHhcccccccccccCCCcEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcC
Q 048104 53 NAIVKGYYKNHVKKVLTRINTITRIAYKDDPTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSID 120 (316)
Q Consensus 53 d~~~~~~~~~~v~~vv~R~N~~tg~~ykd~PaI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks~D 120 (316)
.++..+.+.+.++.++.. -+.....++.|-.+-+......+ ..++...|+.+|
T Consensus 114 ~~~~~~~~~~~l~~l~~~--------a~~~gi~l~lEn~~~~~~~~~~t-------~~~~~~li~~v~ 166 (279)
T cd00019 114 KEEGLKRVIEALNELIDK--------AETKGVVIALETMAGQGNEIGSS-------FEELKEIIDLIK 166 (279)
T ss_pred HHHHHHHHHHHHHHHHHh--------ccCCCCEEEEeCCCCCCCCCCCC-------HHHHHHHHHhcC
Confidence 456667788888888886 45566666666543332111112 345556666666
No 160
>COG0269 SgbH 3-hexulose-6-phosphate synthase and related proteins [Carbohydrate transport and metabolism]
Probab=21.38 E-value=1e+02 Score=27.65 Aligned_cols=24 Identities=17% Similarity=0.346 Sum_probs=20.9
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCC
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYH 25 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~ 25 (316)
+..++..|+++|+.+.++|.++|+
T Consensus 95 I~~~i~~A~~~~~~v~iDl~~~~~ 118 (217)
T COG0269 95 IKKAIKVAKEYGKEVQIDLIGVWD 118 (217)
T ss_pred HHHHHHHHHHcCCeEEEEeecCCC
Confidence 346789999999999999999875
No 161
>PLN00061 photosystem II protein Psb27; Provisional
Probab=20.58 E-value=3.1e+02 Score=23.05 Aligned_cols=52 Identities=15% Similarity=0.209 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHhcccccccccccCCCcEEEEeecCCCCCCCCCChHHHHHHHHHHHHHHHhcCCCCeE
Q 048104 55 IVKGYYKNHVKKVLTRINTITRIAYKDDPTIMAWELINEPRCQADYSGKTLNNWVQEMASYVKSIDNKHLL 125 (316)
Q Consensus 55 ~~~~~~~~~v~~vv~R~N~~tg~~ykd~PaI~aWeL~NEP~~~~~~~~~~~~~w~~e~a~~Iks~Dp~hlV 125 (316)
++++.-+..|+..+.| |+.+|.+- +..+-.+++.=+++++.+=++..|+.++
T Consensus 83 ~aa~~Ake~IndYisr--------yR~~~~V~-----------gl~SfttMqtALnsLAghYssyGpnrPL 134 (150)
T PLN00061 83 RTADAAKESIREYLGN--------WRGQKTVA-----------EEESYVELEKAIRSLASFYSKAGPSAPL 134 (150)
T ss_pred HHHHHHHHHHHHHHHH--------hcCCcccc-----------ccchHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 3456677888889999 99988853 2234456777788888888887777665
No 162
>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II. MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal do
Probab=20.53 E-value=7.1e+02 Score=23.30 Aligned_cols=115 Identities=10% Similarity=0.087 Sum_probs=59.8
Q ss_pred HHHHHHHHHCCCeEEEeCCCCCCCCCCchhhhHHH------Hh-cCCCC-----CCCCCC--ccCHHHHHHHHHHHHHHH
Q 048104 3 DFVTSEARKYGIRLILSLSNNYHDFGGRPQYVNWA------RA-AGASV-----NSDDDF--YTNAIVKGYYKNHVKKVL 68 (316)
Q Consensus 3 D~~l~~A~k~gi~vil~L~n~w~~~Gg~~~y~~w~------~~-~G~~~-----~~~~~f--y~d~~~~~~~~~~v~~vv 68 (316)
..++++.++.|+|+++-++..=..-...+.|..=. +. .|.+. +....| |+||++++.+.+.++.++
T Consensus 67 ~~~i~~l~~~g~k~~~~~~P~i~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~w~G~~~~~Dftnp~a~~ww~~~~~~~~ 146 (317)
T cd06600 67 KKLIDELHKRNVKLVTIVDPGIRVDQNYSPFLSGMDKGKFCEIESGELFVGKMWPGTTVYPDFTNPDTREWWAGLFSEWL 146 (317)
T ss_pred HHHHHHHHHCCCEEEEEeeccccCCCCChHHHHHHHCCEEEECCCCCeEEEeecCCCccccCCCChHHHHHHHHHHHHHh
Confidence 35889999999999987653211000011111100 00 11100 111112 689999999999998877
Q ss_pred hcccccccccccCCCcEEEEeecCCCCCCCCCChHH-HHHHHHHHHHHHHhcCC-CCeEEEcc
Q 048104 69 TRINTITRIAYKDDPTIMAWELINEPRCQADYSGKT-LNNWVQEMASYVKSIDN-KHLLEIGL 129 (316)
Q Consensus 69 ~R~N~~tg~~ykd~PaI~aWeL~NEP~~~~~~~~~~-~~~w~~e~a~~Iks~Dp-~hlVt~G~ 129 (316)
.. ++ .-.-|-=+|||....+- ... -..+.......+++..| .+++++.-
T Consensus 147 ~~--------~g---vdg~w~D~~Ep~~~~~~-hn~y~~~~~~a~~~~~~~~~~~~r~~~~sR 197 (317)
T cd06600 147 NS--------QG---VDGIWLDMNEPSDFEKV-HNLYGLYEAMATAEGFRTSHPRNRIFILTR 197 (317)
T ss_pred hc--------CC---CceEEeeCCCCccHHHh-cchhhHHHHHHHHHHHHHhcCCCCceEEEe
Confidence 53 22 22346668998633110 001 12345556667777665 34555443
No 163
>PRK14507 putative bifunctional 4-alpha-glucanotransferase/malto-oligosyltrehalose synthase; Provisional
Probab=20.46 E-value=1e+02 Score=36.06 Aligned_cols=25 Identities=12% Similarity=0.222 Sum_probs=21.4
Q ss_pred HHHHHHHHHHCCCeEEEeCCCCCCC
Q 048104 2 LDFVTSEARKYGIRLILSLSNNYHD 26 (316)
Q Consensus 2 LD~~l~~A~k~gi~vil~L~n~w~~ 26 (316)
|..++++|+++||+||+++.-|...
T Consensus 809 f~~Lv~~ah~~Gi~vilDiV~NH~~ 833 (1693)
T PRK14507 809 FERFCAALKAHGLGQLLDIVPNHMG 833 (1693)
T ss_pred HHHHHHHHHHCCCEEEEEecccccC
Confidence 7889999999999999999765443
Done!