Query 048106
Match_columns 694
No_of_seqs 256 out of 1725
Neff 5.6
Searched_HMMs 46136
Date Fri Mar 29 06:19:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048106.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/048106hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1292 Xanthine/uracil transp 100.0 1E-103 3E-108 851.0 31.0 477 176-691 1-510 (510)
2 COG2233 UraA Xanthine/uracil p 100.0 2.4E-80 5.2E-85 677.7 33.2 410 176-653 5-438 (451)
3 PRK11412 putative uracil/xanth 100.0 1.7E-77 3.6E-82 660.8 31.4 397 187-652 8-431 (433)
4 TIGR03616 RutG pyrimidine util 100.0 6.3E-68 1.4E-72 586.0 35.2 391 174-651 17-428 (429)
5 PRK10720 uracil transporter; P 100.0 4.8E-68 1E-72 587.0 31.9 395 175-657 2-414 (428)
6 TIGR00801 ncs2 uracil-xanthine 100.0 5.3E-65 1.1E-69 561.0 31.4 393 183-647 1-415 (415)
7 TIGR03173 pbuX xanthine permea 100.0 1.7E-63 3.8E-68 547.2 26.4 389 193-649 1-406 (406)
8 PF00860 Xan_ur_permease: Perm 100.0 1.1E-63 2.5E-68 546.0 15.9 364 187-586 1-386 (389)
9 COG2252 Xanthine/uracil/vitami 99.9 6.6E-26 1.4E-30 248.0 24.8 341 176-566 8-376 (436)
10 TIGR00843 benE benzoate transp 99.8 6.5E-18 1.4E-22 184.6 27.2 305 188-552 22-346 (395)
11 PF03594 BenE: Benzoate membra 99.5 3E-12 6.5E-17 138.7 24.2 302 188-551 6-329 (378)
12 COG0659 SUL1 Sulfate permease 99.4 3E-11 6.5E-16 138.6 22.6 299 186-546 21-357 (554)
13 COG3135 BenE Uncharacterized p 99.4 1.1E-10 2.5E-15 124.5 24.9 294 187-542 20-334 (402)
14 PRK11660 putative transporter; 99.4 3.3E-11 7.1E-16 139.0 20.5 321 186-547 29-389 (568)
15 TIGR00815 sulP high affinity s 99.3 9.7E-11 2.1E-15 134.9 21.6 304 186-547 14-369 (563)
16 PF00916 Sulfate_transp: Sulfa 98.6 5.2E-08 1.1E-12 102.1 6.2 109 432-547 149-257 (280)
17 TIGR00834 ae anion exchange pr 98.4 0.00011 2.4E-09 88.4 28.2 300 224-560 401-797 (900)
18 KOG1172 Na+-independent Cl/HCO 98.1 0.00032 6.9E-09 83.1 20.9 327 194-558 363-771 (876)
19 KOG0236 Sulfate/bicarbonate/ox 98.0 8.1E-05 1.7E-09 87.9 15.9 243 262-547 166-437 (665)
20 PF11840 DUF3360: Protein of u 96.5 0.14 2.9E-06 56.5 17.5 368 148-562 19-416 (492)
21 PF00955 HCO3_cotransp: HCO3- 95.7 0.0088 1.9E-07 68.7 4.1 180 344-560 277-478 (510)
22 KOG0162 Myosin class I heavy c 72.0 28 0.00062 41.9 10.8 48 138-188 1033-1088(1106)
23 TIGR00843 benE benzoate transp 67.5 43 0.00092 38.0 10.8 127 226-364 256-393 (395)
24 PF03594 BenE: Benzoate membra 46.9 17 0.00036 40.8 3.2 45 489-544 82-126 (378)
25 PHA03419 E4 protein; Provision 45.3 1.1E+02 0.0024 31.3 8.3 8 66-73 45-52 (200)
26 TIGR00815 sulP high affinity s 39.9 31 0.00067 40.5 4.2 115 433-559 18-149 (563)
27 PRK11660 putative transporter; 34.6 6.8E+02 0.015 29.5 14.1 77 226-309 313-395 (568)
28 KOG0559 Dihydrolipoamide succi 34.3 1E+02 0.0023 34.5 6.7 13 185-197 289-301 (457)
29 COG3135 BenE Uncharacterized p 31.9 87 0.0019 35.2 5.6 45 490-545 98-142 (402)
30 KOG4085 Uncharacterized conser 30.9 61 0.0013 31.8 3.8 47 504-554 28-74 (175)
31 PF00860 Xan_ur_permease: Perm 28.1 3.1E+02 0.0067 30.6 9.5 90 212-305 256-350 (389)
32 TIGR01299 synapt_SV2 synaptic 28.0 2.3E+02 0.0049 34.8 8.9 44 207-251 190-237 (742)
33 PF15234 LAT: Linker for activ 26.1 2E+02 0.0044 29.3 6.6 8 11-18 57-64 (230)
34 KOG2675 Adenylate cyclase-asso 24.8 2E+02 0.0044 33.0 7.0 14 28-41 212-225 (480)
35 COG1620 LldP L-lactate permeas 23.7 3.8E+02 0.0083 31.6 9.2 81 433-535 69-149 (522)
36 TIGR03173 pbuX xanthine permea 23.7 1.1E+03 0.023 26.5 13.4 73 224-300 253-330 (406)
37 TIGR00801 ncs2 uracil-xanthine 23.3 2.8E+02 0.0061 31.4 8.1 73 225-301 270-347 (415)
38 COG0659 SUL1 Sulfate permease 23.2 1.4E+02 0.0031 35.3 5.8 117 432-560 24-151 (554)
39 COG4666 TRAP-type uncharacteri 23.1 35 0.00077 40.6 0.9 24 30-53 259-284 (642)
40 COG4129 Predicted membrane pro 21.9 5.6E+02 0.012 28.5 9.8 19 348-366 129-147 (332)
41 KOG1307 K+-dependent Ca2+/Na+ 21.9 5.9E+02 0.013 29.8 9.9 44 187-234 426-469 (588)
42 PHA03247 large tegument protei 20.3 1.3E+03 0.028 32.9 13.7 13 22-34 2848-2860(3151)
No 1
>KOG1292 consensus Xanthine/uracil transporters [Nucleotide transport and metabolism]
Probab=100.00 E-value=1.2e-103 Score=851.05 Aligned_cols=477 Identities=46% Similarity=0.848 Sum_probs=455.7
Q ss_pred cceecCCCCChHHHHHHHHHHHHHHHHHHhHHHHHHHhhcCCCcchh-HHHHHHHHHHHHHHHHHHHHhccCcceEeccc
Q 048106 176 MKYQLRDTPGLVPIGLYGFQHYLSMLGSLILIPLVIVPAMGGSHEDT-SNVVSTVLFVSGVTTLLHTFFGSRLPLIQGSS 254 (694)
Q Consensus 176 l~y~l~d~Pp~~~~illGlQH~LaM~~~~IvvPlIia~a~Gl~~~~~-~~lIsatl~vsGIaTllQ~~~G~rLPiv~GpS 254 (694)
+.|+++|.|||...+++||||++.|+++++++|.++++++|.+++|. +.+||++||++||.|++|++||+|||++||+|
T Consensus 1 l~y~i~d~P~w~~~i~lgfQhyl~~lg~~v~iP~~lv~~m~~g~~~~~~~lIsT~~f~sGI~TllQt~fG~RLp~v~G~S 80 (510)
T KOG1292|consen 1 LHYCINDNPPWPEIILLGFQHYLVCLGTTVLIPFLLVPLMCGGDEEKAVQLISTIFFVSGITTLLQTTFGTRLPLVQGPS 80 (510)
T ss_pred CccCCCCCCCchHHHHhccchHHHHhhhhhhhhhhhcccccCChHHHHHHHHHHHhhhccHHHHHHHHhhcccccccccc
Confidence 47999999999999999999999999999999999999999999998 99999999999999999999999999999999
Q ss_pred cchHH---------------------------HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhCCceehhhhhhhhhhh
Q 048106 255 FNFKH---------------------------IMKELQGAIIIGSVFQAFLGYSGLMSLLLRLINPVVVAPTIAAVGLSF 307 (694)
Q Consensus 255 fafi~---------------------------~~~~~~GaiivaGl~~ilLg~tgl~~~L~r~fpPvV~g~vV~lIGlsL 307 (694)
|+|+. .|+++|||+++++++++++|++|+++++.|++.|+.+.|+++++|+++
T Consensus 81 fafl~p~~~i~~~~~~~~~~~~~~~~~~~~~~~mr~iqGAlivas~vqiilG~sGl~g~l~rfi~Plti~P~v~lvgl~l 160 (510)
T KOG1292|consen 81 FAFLPPALAIISLPRFTCITTPHETDTERFQHRMREIQGALIVASLVQIILGFSGLWGNLLRFIGPLTIVPLVALVGLGL 160 (510)
T ss_pred eehhhHHHHHHhccccCCCCCcccchhHHHHHHHHHhcchHHHHHHHHHHHhhhhhHHHHHhhcCChhhhhHHHHHhhhh
Confidence 97752 368899999999999999999999999999999999999999999999
Q ss_pred hhcccccccchhhhhHHHHHHHHHHHHH--HHHHHh--hhhhhHHHhhHHHHHHHHHHHHHHhhhhccCcCcccccCCCc
Q 048106 308 YSYGFPLVGTCLEIGVVQILLVILFSLY--LRKISV--IGHRIFLIYAVPLGLAITWAAAFLLTETGAYNYKECDVNVPV 383 (694)
Q Consensus 308 ~~~g~~~~g~~~~ig~~~~ll~i~~sl~--l~~i~~--~g~~~~r~~aVLIGi~vG~iva~~lg~~g~~~~~~~~~~~p~ 383 (694)
+..+++.++.||+++++..++++++++| +.+... ..++++++|++++++.+.|++|++++.+|.|+++++
T Consensus 161 ~~~~~~~~~~~weI~l~~~llli~fsqy~~~~~~~~~~~~~~if~~f~vll~i~ivW~~~~iLT~tgay~~~~~------ 234 (510)
T KOG1292|consen 161 FQDGFPKLGKHWEISLPEILLLILFSQYASLPKKGFGSRRIQIFSRFPVLLAIAIVWLYCFILTITGAYPYKPT------ 234 (510)
T ss_pred HHhhhhhhhhheeecHHHHHHHHHHHHhhhcccccccccccchHhhccHHHHHHHHHHHHHHHHhccccCCCcc------
Confidence 9999999999999999999999999999 422222 236789999999999999999999999999988754
Q ss_pred cccccccccccccccccccccCCccccCCCccccccccccccccchHHHHHHHHHHHHHHhhhcchhhhhhhhhccCCCC
Q 048106 384 SNIISEHCRKHVSRMKQCRVDSSHALKSSPWFRFPYPLQWGTPVFHWKMAVVMCVVSVIASVDSVGSYHASSLLVASRPP 463 (694)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~vD~s~~v~~apWf~lP~p~~~G~P~F~~~~il~~l~v~lv~~vEsiG~~~A~~~~~~~~~~ 463 (694)
+|+.+||+|.+..++++||+++|||+|||.|+||++.++.|+...+++++||+|+|.++++.+..+++
T Consensus 235 ------------~t~~~~RTD~~~vi~~apWi~vPyP~QwG~P~f~~~~~f~m~aa~~va~iES~G~y~a~ar~~~a~pp 302 (510)
T KOG1292|consen 235 ------------TTQSSCRTDRNGVISSAPWIRVPYPFQWGPPTFSAGLVFAMMAASLVAMIESTGDYIACARLSSATPP 302 (510)
T ss_pred ------------ccCCcccccHhhhhccCCceeecCCCccCCCcccHHHHHHHHHHHHHHHHHhcchHHHHHHHhcCCCC
Confidence 46788999998888999999999999999999999999999999999999999999999999988999
Q ss_pred CCcccccccccchhHHHHHhhhcCCCCcccccccceeeeecccccceehhHHHHHHHHHHHHHHHHHHHHhCChhhhhHH
Q 048106 464 TPGVVSRAIGLEGLCSVLAGLWGTGTGSTTLTENVHTIAVTKMGSRRAVEIGAGILIVLSLIGKVGGFIASIPQVMVAGL 543 (694)
Q Consensus 464 ~~~~i~Rgi~adGl~silAGl~Gtg~p~TtyseNvGvIalTgvaSR~v~~~aa~~LIllgf~PK~~allasIP~pVlGG~ 543 (694)
+++.++||+..||++++|+|+||+|+++|||+||+|++++|||+|||+++++|+|||++|++.||+|++++||+|++||+
T Consensus 303 P~~~inRgi~~eGig~lL~gl~G~gtG~Tt~~ENigll~vTKVgSRrvvQ~aa~fmI~~~i~gKFgA~fAsIP~piv~~l 382 (510)
T KOG1292|consen 303 PPSVLNRGIGWEGIGSLLAGLFGTGTGSTTSVENIGLLGVTKVGSRRVVQIAAGFMIFFGIFGKFGAFFASIPDPIVGGL 382 (510)
T ss_pred ChhhhhhhhhhhhHHHHHHHhhCCCccceeeccceeeEeeeeeeeeeehhhhHHHHHHHHHHHHHHHHHHcCcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccccccccCCCccceEEEEehhhcccchhhhhhhcCCCCCcccCCCcccccccccCCCCccccccchh
Q 048106 544 LCFMWAMLAALGLSNLRYSEAGSSRNIIIVGLSLFFSLSIPAYFQQYGISPNTNLSVPSYFQPYSVASHGPFRSKYGGVN 623 (694)
Q Consensus 544 livlfg~i~~sGl~~L~~~~~~~~RN~~IvGlsL~~Glgv~~~f~~~~~~p~~~~~lP~~~~p~~~~~~g~~~t~~~~~~ 623 (694)
+|++|+|+.+.|+++||+.|+++.||++|+|+|+++|+++|+||+||+ +|+||+++++|
T Consensus 383 ~c~~~~mv~avgLSnLQf~dlns~RNl~IlG~Sif~gLsip~yF~~~~---------------------~~v~Tg~~~~d 441 (510)
T KOG1292|consen 383 LCILFGMVGAVGLSNLQFVDLNSSRNLFILGFSIFLGLSIPQYFEQYP---------------------GPVHTGNGWFD 441 (510)
T ss_pred HHHHHHHHHHHhhhhheeeccccccchhhhhHHHHHhccHHHHHHhCC---------------------CccccCcHHHH
Confidence 999999999999999999999999999999999999999999999873 47899999999
Q ss_pred hHHHHHhhhhHHHHHHHHHhhcccCCC-CcccccccccccchhccccccccccccCCcccccccccccc
Q 048106 624 YVMNTLLSLHVVVAFLFAVVLDNTVPG-SRQERGVYEWSETEAARREPAIAKDYELPFRVGRVFRWVKW 691 (694)
Q Consensus 624 ~~l~~ll~sg~~vg~lvaiiLn~~lp~-~~~erg~~~w~~~~~~~~~~~~~~~y~lp~~~~~~~~~~~~ 691 (694)
+++|++|++.|.+|+++|++|||++|+ ++||||.++|++.++...|.+.+|+|+||++++|+|+++||
T Consensus 442 ~ilnvll~~~m~Vggi~A~~LDnt~~gatr~~RG~~~w~~~~~~~~d~~~~e~Y~lP~~~n~~f~~~~~ 510 (510)
T KOG1292|consen 442 DILNVLLSSRMLVGGILAFILDNTLPGATREQRGLRWWDKFETFNGDVRNEEFYSLPFNLNRFFPRIPW 510 (510)
T ss_pred HHHHHHhhHHHHHHHHHhhhccccCCCCChHhcCCcchhccccccCCccccccccCcHHHHhhcccCCC
Confidence 999999999999999999999999998 59999999999999999999999999999999999999998
No 2
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=100.00 E-value=2.4e-80 Score=677.66 Aligned_cols=410 Identities=30% Similarity=0.512 Sum_probs=368.8
Q ss_pred cceecCCCCChHHHHHHHHHHHHHHHHHHhHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHHH----hccCcceEe
Q 048106 176 MKYQLRDTPGLVPIGLYGFQHYLSMLGSLILIPLVIVPAMGGSHEDTSNVVSTVLFVSGVTTLLHTF----FGSRLPLIQ 251 (694)
Q Consensus 176 l~y~l~d~Pp~~~~illGlQH~LaM~~~~IvvPlIia~a~Gl~~~~~~~lIsatl~vsGIaTllQ~~----~G~rLPiv~ 251 (694)
..+..||++|+.+++++|+||+++|++++|++|++++.+.|+++||+++++|++||+|||+|++|++ +|+|+|++|
T Consensus 5 ~~~~~~~~~~~~~~~~lglQH~lamfg~~V~VPlivg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~l 84 (451)
T COG2233 5 IYVLVDERLPLGKLLLLGLQHLLAMFGATVLVPLLVGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYL 84 (451)
T ss_pred ccCcccccCChHHHHHHHHHHHHHHHhcchHhhHHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeE
Confidence 4455788889999999999999999999999999999999999999999999999999999999997 677999999
Q ss_pred ccccchHHH-----------HHHHHHHHHHHHHHHHHHHhhhHHH-HHHHHhCCceehhhhhhhhhhhhhcccccccch-
Q 048106 252 GSSFNFKHI-----------MKELQGAIIIGSVFQAFLGYSGLMS-LLLRLINPVVVAPTIAAVGLSFYSYGFPLVGTC- 318 (694)
Q Consensus 252 GpSfafi~~-----------~~~~~GaiivaGl~~ilLg~tgl~~-~L~r~fpPvV~g~vV~lIGlsL~~~g~~~~g~~- 318 (694)
|+||+|+.. ++.++|+++++|+++++++. +++ |++|+|||+|+|+++++||++|++++++++++.
T Consensus 85 G~sFafi~p~i~~~~~~g~~~~~~~G~ii~ag~~~~li~~--~~~~~l~rlfPPvVtG~Vi~~IGlsL~~vai~~~~G~~ 162 (451)
T COG2233 85 GSSFAFVAPMIAIGGTTGDGIAALLGGIIAAGLVYFLISP--IVKIRLARLFPPVVTGPVVLVIGLSLAPVAINMAGGGP 162 (451)
T ss_pred echHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHH--HHHHHHHHhCCCceEEeEeeeehhhhHHHHHHHhhCCC
Confidence 999998753 56889999999999999997 567 999999999999999999999999999988643
Q ss_pred -----hhhhHHHHHHHHHHHH-HHHHHHhhhhhhHHHhhHHHHHHHHHHHHHHhhhhccCcCcccccCCCcccccccccc
Q 048106 319 -----LEIGVVQILLVILFSL-YLRKISVIGHRIFLIYAVPLGLAITWAAAFLLTETGAYNYKECDVNVPVSNIISEHCR 392 (694)
Q Consensus 319 -----~~ig~~~~ll~i~~sl-~l~~i~~~g~~~~r~~aVLIGi~vG~iva~~lg~~g~~~~~~~~~~~p~~~~~~~~~~ 392 (694)
.+++.+..+.+.+.++ ....+++|+|+++|++++++|+++||++|+++|
T Consensus 163 ~~~~~~~~~~~~~l~la~~tl~~il~~~~f~~g~~~~i~ILiGlv~G~~la~~~G------------------------- 217 (451)
T COG2233 163 GAAGNPDFGSLENLGLALVTLLIILLINRFGKGFLRRIPILIGLVVGYLLALFMG------------------------- 217 (451)
T ss_pred CCCCCcccCchhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-------------------------
Confidence 2234444433333322 224578899999999999999999999999987
Q ss_pred ccccccccccccCCccccCCCccccccccccccccchHHHHHHHHHHHHHHhhhcchhhhhhhhhccCCCCCCccccccc
Q 048106 393 KHVSRMKQCRVDSSHALKSSPWFRFPYPLQWGTPVFHWKMAVVMCVVSVIASVDSVGSYHASSLLVASRPPTPGVVSRAI 472 (694)
Q Consensus 393 ~~~~~~~~~~vD~s~~v~~apWf~lP~p~~~G~P~F~~~~il~~l~v~lv~~vEsiG~~~A~~~~~~~~~~~~~~i~Rgi 472 (694)
++|++. +.++|||++|.|++||. +|||.++++|+++++++++|++||++|++++++.+-..+++++||+
T Consensus 218 ---------~vdf~~-v~~a~w~~~P~~~~fg~-~F~~~ail~m~~v~iV~~~E~~G~i~A~~~itg~~~~~~~~l~rg~ 286 (451)
T COG2233 218 ---------MVDFSG-VAEAPWFALPTPFYFGM-AFDWGAILTMLPVAIVTIVEHTGDITATGEITGRDLDGKPRLRRGL 286 (451)
T ss_pred ---------CcCccc-cccCceeeCCcccCCCe-eecHHHHHHHHHHHHHHHHHHhhhhhhHHhHhCCcCccCcccccce
Confidence 278885 88999999999999999 9999999999999999999999999999999854333358899999
Q ss_pred ccchhHHHHHhhhcCCCCcccccccceeeeecccccceehhHHHHHHHHHHHHHHHHHHHHhCChhhhhHHHHHHHHHHH
Q 048106 473 GLEGLCSVLAGLWGTGTGSTTLTENVHTIAVTKMGSRRAVEIGAGILIVLSLIGKVGGFIASIPQVMVAGLLCFMWAMLA 552 (694)
Q Consensus 473 ~adGl~silAGl~Gtg~p~TtyseNvGvIalTgvaSR~v~~~aa~~LIllgf~PK~~allasIP~pVlGG~livlfg~i~ 552 (694)
++||++|++||+||+ +|+|||+||+|++++||++||+++.++|+++|++||+||+++++++||.||+||+.+++||+++
T Consensus 287 ~aDGlat~iag~fg~-~p~TtfaqNiGvv~lT~v~Sr~V~~~aavili~lgl~pk~~al~~sIP~pVlGGa~ivmFG~Ia 365 (451)
T COG2233 287 LADGLATLIAGLFGG-FPNTTFAQNIGVVALTGVYSRYVIAGAAVILILLGLFPKFGALIQSIPSPVLGGAMLVLFGMIA 365 (451)
T ss_pred eeccHHHHHHHhcCC-CCCCchhhceeeeeeccCChhHHHHHHHHHHHHHHhhHHHHHHHHhCChhhhhHHHHHHHHHHH
Confidence 999999999999996 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccccccccCCCcc-ceEEEEehhhcccchhhhhhhcCCCCCcccCCCcccccccccCCCCccccccchhhHHHHHhh
Q 048106 553 ALGLSNLRYSEAGSSR-NIIIVGLSLFFSLSIPAYFQQYGISPNTNLSVPSYFQPYSVASHGPFRSKYGGVNYVMNTLLS 631 (694)
Q Consensus 553 ~sGl~~L~~~~~~~~R-N~~IvGlsL~~Glgv~~~f~~~~~~p~~~~~lP~~~~p~~~~~~g~~~t~~~~~~~~l~~ll~ 631 (694)
++|+|++.+.+.+++| |++|+++++.+|+++.. .|+.+.++|+|++ .+++
T Consensus 366 ~sGir~l~~~~~~~~~~Nl~IvAvsl~~Gig~~~-------~p~~~~~~p~~~~----------------------~l~~ 416 (451)
T COG2233 366 ASGIRILIRNKVDRSRRNLLIVAVSLGLGIGVGA-------VPEVFLQLPAWLR----------------------PLLS 416 (451)
T ss_pred HHHHHHHHhcccccCccceeeehHHHHhCcchhc-------CchhhhhCcHHHH----------------------HHHh
Confidence 9999999988877756 99999999999999763 5778888999887 4889
Q ss_pred hhHHHHHHHHHhhcccCCCCcc
Q 048106 632 LHVVVAFLFAVVLDNTVPGSRQ 653 (694)
Q Consensus 632 sg~~vg~lvaiiLn~~lp~~~~ 653 (694)
||+++|+++|++||+++|+.++
T Consensus 417 sGia~g~i~AIvLNlll~~~~~ 438 (451)
T COG2233 417 SGIALGTLTAIVLNLLLPGEKR 438 (451)
T ss_pred ccHHHHHHHHHHHHHhcccccc
Confidence 9999999999999999996554
No 3
>PRK11412 putative uracil/xanthine transporter; Provisional
Probab=100.00 E-value=1.7e-77 Score=660.79 Aligned_cols=397 Identities=16% Similarity=0.244 Sum_probs=345.1
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHHHhccCcceEeccccchHHH------
Q 048106 187 VPIGLYGFQHYLSMLGSLILIPLVIVPAMGGSHEDTSNVVSTVLFVSGVTTLLHTFFGSRLPLIQGSSFNFKHI------ 260 (694)
Q Consensus 187 ~~~illGlQH~LaM~~~~IvvPlIia~a~Gl~~~~~~~lIsatl~vsGIaTllQ~~~G~rLPiv~GpSfafi~~------ 260 (694)
.+++++|+||+++|+++++++|+++++++|++++|+++++|+++|+|||+|++|+++|+|||++||+||+|++.
T Consensus 8 ~~~~~lglQhvl~m~~~~i~vPliva~a~gl~~~~~~~li~~~l~~sGIaTllQ~~~G~rlPiv~G~Sf~~~~~~~~i~~ 87 (433)
T PRK11412 8 RESLLSGFQWFFFIFCNTVVVPPTLLSAFQLPQSSLLTLTQYAFLATALACFAQAFCGHRRAIMEGPGGLWWGTILTITL 87 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeeCCchHHHHHHHHHHh
Confidence 57999999999999999999999999999999999999999999999999999999999999999999998641
Q ss_pred --------HHHH----HHHHHHHHHHHHHHHhhhHHHHHHHHhCCceehhhhhhhhhhhhhcccccccch-----hhhhH
Q 048106 261 --------MKEL----QGAIIIGSVFQAFLGYSGLMSLLLRLINPVVVAPTIAAVGLSFYSYGFPLVGTC-----LEIGV 323 (694)
Q Consensus 261 --------~~~~----~GaiivaGl~~ilLg~tgl~~~L~r~fpPvV~g~vV~lIGlsL~~~g~~~~g~~-----~~ig~ 323 (694)
++++ +|+++++|+++++++++++++|++|+|||+|+|+++++||++|++.+++++++. .+.+.
T Consensus 88 ~~~~~g~~~~~~~g~l~g~~i~~g~~~~~lg~~~~~~~l~r~fpPvV~G~vv~lIGlsL~~~a~~~~~G~~~~~~~~~~~ 167 (433)
T PRK11412 88 GEASRGTPINDIATSLAVGIALSGVVTILIGFSGLGHRLARLFTPMVMVVFMLLLGAQLTTIFFKGMLGLPFGIADPNGK 167 (433)
T ss_pred cccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhhHhHHHHHHhhHHHHHHHhcCCCccCcccccc
Confidence 2234 446999999999999999999999999999999999999999999999976432 12221
Q ss_pred --HHH-HHHHHHHHHHHHHHhhhhhhHHHhhHHHHHHHHHHHHHHhhhhccCcCcccccCCCcccccccccccccccccc
Q 048106 324 --VQI-LLVILFSLYLRKISVIGHRIFLIYAVPLGLAITWAAAFLLTETGAYNYKECDVNVPVSNIISEHCRKHVSRMKQ 400 (694)
Q Consensus 324 --~~~-ll~i~~sl~l~~i~~~g~~~~r~~aVLIGi~vG~iva~~lg~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 400 (694)
+.. .+.+...+++..+++|+|+++|++++++|+++||++|.++. +
T Consensus 168 ~~~~~~~~a~~~l~~il~~~~~~~g~~~~~svLiGiv~G~v~a~~~~--g------------------------------ 215 (433)
T PRK11412 168 IQLPPFGLSVAVMCLVLAMIIFLPQRIARYSLLVGTIVGWILWAFCF--P------------------------------ 215 (433)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHh--C------------------------------
Confidence 122 22222223345577899999999999999999999976432 1
Q ss_pred ccccCCccccCCCcccccccccccccc-chHHHHHHHHHHHHHHhhhcchhhhhhhhhccCCCCCCcccccccccchhHH
Q 048106 401 CRVDSSHALKSSPWFRFPYPLQWGTPV-FHWKMAVVMCVVSVIASVDSVGSYHASSLLVASRPPTPGVVSRAIGLEGLCS 479 (694)
Q Consensus 401 ~~vD~s~~v~~apWf~lP~p~~~G~P~-F~~~~il~~l~v~lv~~vEsiG~~~A~~~~~~~~~~~~~~i~Rgi~adGl~s 479 (694)
+ |++ .+.+++|+ +++||.|. ||+.+++++++++++.++|++||++|+++..+.+.+++++++||+++||++|
T Consensus 216 -~-d~~-~v~~a~w~----~~pfG~P~~F~~~~il~~~~~~lv~~~e~iG~~~a~~~~~~~~~~~~~~l~rgi~~dGi~s 288 (433)
T PRK11412 216 -S-SHS-LSGELHWQ----WFPLGSGGALEPGIILTAVITGLVNISNTYGAIRGTDVFYPQQGAGNTRYRRSFVATGFMT 288 (433)
T ss_pred -C-Ccc-hhccCCce----eecCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcccccchhhccHHH
Confidence 1 555 36788895 34589995 9999999999999999999999999999987544444779999999999999
Q ss_pred HHHhhhcCCCCcccccccceeeeecccccceehhHHHHHHHHHHHHHHHHHHHHhCChhhhhHHHHHHHHHHHHhhcccc
Q 048106 480 VLAGLWGTGTGSTTLTENVHTIAVTKMGSRRAVEIGAGILIVLSLIGKVGGFIASIPQVMVAGLLCFMWAMLAALGLSNL 559 (694)
Q Consensus 480 ilAGl~Gtg~p~TtyseNvGvIalTgvaSR~v~~~aa~~LIllgf~PK~~allasIP~pVlGG~livlfg~i~~sGl~~L 559 (694)
++||+||+ +|+|||+||+|++++|||+||++++++|++|+++||+||+++++++||.||+||+++++|++++++|++++
T Consensus 289 ~laglfg~-~p~tt~sqNvGvi~~TgV~SR~v~~~aa~ilillgl~PK~~alia~IP~pVlGg~~~~~Fg~I~~~Gi~~l 367 (433)
T PRK11412 289 LITVPLAV-IPFSPFVSSIGLLTQTGDYRRRSFIYGSVMCLLVALIPALTRLFCSIPLPVSSAVMLVSYLPLLGSALVFS 367 (433)
T ss_pred HHHHhcCC-CCCCchhhhhhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999995 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCccceEEEEehhhcccchhhhhhhcCCCCCcccCCCcccccccccCCCCccccccchhhHHHHHhhhhHHHHHH
Q 048106 560 RYSEAGSSRNIIIVGLSLFFSLSIPAYFQQYGISPNTNLSVPSYFQPYSVASHGPFRSKYGGVNYVMNTLLSLHVVVAFL 639 (694)
Q Consensus 560 ~~~~~~~~RN~~IvGlsL~~Glgv~~~f~~~~~~p~~~~~lP~~~~p~~~~~~g~~~t~~~~~~~~l~~ll~sg~~vg~l 639 (694)
++.|+ ++||++|+|+++++|++++.. |+++++++|++++ .+|+||+++|++
T Consensus 368 ~~~~~-~~rn~~ivg~sl~~Glg~~~~------p~~~~~~~P~~~~----------------------~~l~sgi~~g~l 418 (433)
T PRK11412 368 QQITF-TARNIYRLALPLFVGIFLMAL------PPVYLQDLPLTLR----------------------PLLSNGLLVGIL 418 (433)
T ss_pred HhCCC-CcccchhhHHHHHHHhhHHhC------CHHHHHHChHHHH----------------------HHHcCcHHHHHH
Confidence 97765 589999999999999998631 2356777887765 699999999999
Q ss_pred HHHhhcccCCCCc
Q 048106 640 FAVVLDNTVPGSR 652 (694)
Q Consensus 640 vaiiLn~~lp~~~ 652 (694)
+|++||+++|++|
T Consensus 419 ~AilLn~~~~~~~ 431 (433)
T PRK11412 419 LAVLMENLIPWER 431 (433)
T ss_pred HHHHHHhhcCccc
Confidence 9999999999754
No 4
>TIGR03616 RutG pyrimidine utilization transport protein G. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the uracil-xanthine permease family defined by TIGR00801. As well as the The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40).
Probab=100.00 E-value=6.3e-68 Score=586.05 Aligned_cols=391 Identities=25% Similarity=0.384 Sum_probs=334.1
Q ss_pred CCcceecCCCCChHHHHHHHHHHHHHHHHHHhHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHH-HhccCcceEec
Q 048106 174 SHMKYQLRDTPGLVPIGLYGFQHYLSMLGSLILIPLVIVPAMGGSHEDTSNVVSTVLFVSGVTTLLHT-FFGSRLPLIQG 252 (694)
Q Consensus 174 ~~l~y~l~d~Pp~~~~illGlQH~LaM~~~~IvvPlIia~a~Gl~~~~~~~lIsatl~vsGIaTllQ~-~~G~rLPiv~G 252 (694)
++..|++||+||+.+++++|+||+++|+++++++|+++ |+|++ +++|+|||+|++|+ .+|+|||++||
T Consensus 17 ~~~~~~~d~~~p~~~~~~~GlQh~lam~~~~v~~Plil----gl~~~-------~tl~~sGi~TllQ~~~~G~rlP~v~G 85 (429)
T TIGR03616 17 EHHPVAPDERLPAAQTIVMGLQHAVAMFGATVLMPLLM----GFDPN-------LTILMSGIGTLLFFLITGGRVPSYLG 85 (429)
T ss_pred cCcccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh----CCCHh-------HHHHHHHHHHHHHHHHhCCCceeEEc
Confidence 33789999999999999999999999999999999997 57765 57999999999997 58999999999
Q ss_pred cccchHHH---------------HHHHHHHHHHHHHHHHHHHhhhHH---HHHHHHhCCceehhhhhhhhhhhhhccccc
Q 048106 253 SSFNFKHI---------------MKELQGAIIIGSVFQAFLGYSGLM---SLLLRLINPVVVAPTIAAVGLSFYSYGFPL 314 (694)
Q Consensus 253 pSfafi~~---------------~~~~~GaiivaGl~~ilLg~tgl~---~~L~r~fpPvV~g~vV~lIGlsL~~~g~~~ 314 (694)
+||+|+.. ++.++|+++++|+++++++++.+. ++++|+|||+|+|+++++||++|++.++++
T Consensus 86 ~sf~f~~~~~~~~~~~~~~~~~~~~~a~ga~iv~G~i~~llg~~~~~~~~~~l~r~fpPvV~G~vv~lIGlsL~~vg~~~ 165 (429)
T TIGR03616 86 SSAAFVGAVIAATGYNGQGTNPNIALALGGIIACGLVYAAIGLVVMRTGTRWIERLMPPVVTGAVVMAIGLNLAPIAVKS 165 (429)
T ss_pred CcHHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHh
Confidence 99988643 356779999999999999987544 889999999999999999999999999987
Q ss_pred ccchhhhhHHHHHHHHHHHHHHHHHHhhhhhhHHHhhHHHHHHHHHHHHHHhhhhccCcCcccccCCCcccccccccccc
Q 048106 315 VGTCLEIGVVQILLVILFSLYLRKISVIGHRIFLIYAVPLGLAITWAAAFLLTETGAYNYKECDVNVPVSNIISEHCRKH 394 (694)
Q Consensus 315 ~g~~~~ig~~~~ll~i~~sl~l~~i~~~g~~~~r~~aVLIGi~vG~iva~~lg~~g~~~~~~~~~~~p~~~~~~~~~~~~ 394 (694)
.+.. .++.+..++.++ .+..+.+|+|+++|++++++|+++||++|+.++.. +..
T Consensus 166 ~~~~-~~~~~~al~tl~---~i~l~~l~~~~~l~~~avLiGivvG~iva~~l~~~--~g~-------------------- 219 (429)
T TIGR03616 166 VSAS-GFDSWMAVLTIL---CIGAVAVFTRGMLQRLLILVGLIAAYLAYFILTNV--FGL-------------------- 219 (429)
T ss_pred cccc-ccccHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--cCC--------------------
Confidence 5432 222222221111 11224568899999999999999999999886421 100
Q ss_pred ccccccccccCCccccCCCccccccccccccccchHHHHHHHHHHHHHHhhhcchhhhhhhhhccCCCCCCccccccccc
Q 048106 395 VSRMKQCRVDSSHALKSSPWFRFPYPLQWGTPVFHWKMAVVMCVVSVIASVDSVGSYHASSLLVASRPPTPGVVSRAIGL 474 (694)
Q Consensus 395 ~~~~~~~~vD~s~~v~~apWf~lP~p~~~G~P~F~~~~il~~l~v~lv~~vEsiG~~~A~~~~~~~~~~~~~~i~Rgi~a 474 (694)
.+++|++. +.+++|+++| +|+.|.||+..++++++++++.++|++||+.++++..+ ++.+ ++++|++.+
T Consensus 220 -----~~~vd~s~-v~~a~~~~lP---~~~~p~f~~~~il~~~~~~lv~~~esiG~~~a~~~~~~-~~~~-~~i~r~l~a 288 (429)
T TIGR03616 220 -----GKAVDFSP-ISQAAWFGLP---NFHTPVFNANAMLLIAPVALILVAENLGHFKAVAGMTG-RNLD-PYMGRAFVG 288 (429)
T ss_pred -----CccccCcc-cccCccccCC---cCCCceEcHHHHHHHHHHHHHHHHHhhHHHHHHHHHhC-CCCC-chhccchhh
Confidence 02478874 7789999999 47789999999999999999999999999999998764 3333 369999999
Q ss_pred chhHHHHHhhhcCCCCcccccccceeeeecccccceehhHHHHHHHHHHHHHHHHHHHHhCChhhhhHHHHHHHHHHHHh
Q 048106 475 EGLCSVLAGLWGTGTGSTTLTENVHTIAVTKMGSRRAVEIGAGILIVLSLIGKVGGFIASIPQVMVAGLLCFMWAMLAAL 554 (694)
Q Consensus 475 dGl~silAGl~Gtg~p~TtyseNvGvIalTgvaSR~v~~~aa~~LIllgf~PK~~allasIP~pVlGG~livlfg~i~~s 554 (694)
||++|+++|++|+ +|+|+|+||+|++++||++||+++..++++++++||+||+++++++||.||+||+++++|+++.++
T Consensus 289 dGl~t~~agl~g~-~p~tt~~en~g~i~~T~v~SR~v~~~a~~~lillgl~Pk~~al~~~IP~pVlgG~~i~~fg~i~~~ 367 (429)
T TIGR03616 289 DGLATMLSGSVGG-TGVTTYAENIGVMAVTKVYSTLVFVAAAVFAILLGFSPKFGALIHTIPVAVLGGASIVVFGLIAVA 367 (429)
T ss_pred hhHHHHHHHhcCC-CCCcceeeeeeeeeecCcchHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999995 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccc--ccccCCCccceEEEEehhhcccchhhhhhhcCCCCCcccCCCcccccccccCCCCccccccchhhHHHHHhhh
Q 048106 555 GLSNL--RYSEAGSSRNIIIVGLSLFFSLSIPAYFQQYGISPNTNLSVPSYFQPYSVASHGPFRSKYGGVNYVMNTLLSL 632 (694)
Q Consensus 555 Gl~~L--~~~~~~~~RN~~IvGlsL~~Glgv~~~f~~~~~~p~~~~~lP~~~~p~~~~~~g~~~t~~~~~~~~l~~ll~s 632 (694)
|+|++ ++.|++++||.+|+|+|+++|++.... + ++.++++
T Consensus 368 Gi~~l~~~~~d~~~~rn~~ivg~sl~~g~g~~~~----------------~----------------------~~~~~~s 409 (429)
T TIGR03616 368 GARIWVQNKVDLTQNGNLIMVAVTLVLGAGDFAL----------------T----------------------IGAFTLG 409 (429)
T ss_pred HHHHHHhccCCcCccceeehhHHHHHHHhHHHHH----------------H----------------------HHHHhhC
Confidence 99987 555666688999999999999986521 1 2468899
Q ss_pred hHHHHHHHHHhhcccCCCC
Q 048106 633 HVVVAFLFAVVLDNTVPGS 651 (694)
Q Consensus 633 g~~vg~lvaiiLn~~lp~~ 651 (694)
|+.+|+++|++||+++|++
T Consensus 410 ~i~~~~~~ai~Ln~~l~~~ 428 (429)
T TIGR03616 410 GIGTATFGAIVLNALLNRD 428 (429)
T ss_pred cHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999954
No 5
>PRK10720 uracil transporter; Provisional
Probab=100.00 E-value=4.8e-68 Score=586.96 Aligned_cols=395 Identities=22% Similarity=0.351 Sum_probs=339.6
Q ss_pred CcceecCCCCChHHHHHHHHHHHHHHHHHHhHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHHHhc-cCcceEecc
Q 048106 175 HMKYQLRDTPGLVPIGLYGFQHYLSMLGSLILIPLVIVPAMGGSHEDTSNVVSTVLFVSGVTTLLHTFFG-SRLPLIQGS 253 (694)
Q Consensus 175 ~l~y~l~d~Pp~~~~illGlQH~LaM~~~~IvvPlIia~a~Gl~~~~~~~lIsatl~vsGIaTllQ~~~G-~rLPiv~Gp 253 (694)
++.|++|||||+.+++++|+||+++|+++++++|+++ |+|.++ ++|+|||+|++|++++ .|||++||+
T Consensus 2 ~~~~~~~~~~p~~~~~~lglQhvl~m~~~~i~~Pli~----gl~~~~-------~l~~sGi~TliQ~~~~g~rlP~~~G~ 70 (428)
T PRK10720 2 RRAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPILF----HINPAT-------VLLFNGIGTLLYLFICKGKIPAYLGS 70 (428)
T ss_pred CcccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhc----CCCHHH-------HHHHHHHHHHHHHHhccCccceEEeC
Confidence 4689999999999999999999999999999999987 777653 7899999999999865 699999999
Q ss_pred ccchHHH--------HHHHHHHHHHHHHHHHHHHhhh--H-HHHHHHHhCCceehhhhhhhhhhhhhcccccccchhh--
Q 048106 254 SFNFKHI--------MKELQGAIIIGSVFQAFLGYSG--L-MSLLLRLINPVVVAPTIAAVGLSFYSYGFPLVGTCLE-- 320 (694)
Q Consensus 254 Sfafi~~--------~~~~~GaiivaGl~~ilLg~tg--l-~~~L~r~fpPvV~g~vV~lIGlsL~~~g~~~~g~~~~-- 320 (694)
||+|++. |++++|+++++|+++++++++. + +++++|+|||.|+|+++++||++|+..++++.|.+..
T Consensus 71 sfa~i~~~~~~~~~~~~~~lgav~v~Glv~ills~~~~~~g~~~l~~~fPp~v~G~~i~lIGl~L~~~~~~~~g~~~~~~ 150 (428)
T PRK10720 71 SFAFISPVLLLLPLGYEVALGGFIMCGVLFCLVALIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAEG 150 (428)
T ss_pred cHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChHHHHHHHHHHHHHhHHHHHhhccccCCCC
Confidence 9998743 6789999999999999999862 1 6789999999999999999999999999886654321
Q ss_pred -hhHHHHHHHHHHHHHH-HHHHhhhhhhHHHhhHHHHHHHHHHHHHHhhhhccCcCcccccCCCcccccccccccccccc
Q 048106 321 -IGVVQILLVILFSLYL-RKISVIGHRIFLIYAVPLGLAITWAAAFLLTETGAYNYKECDVNVPVSNIISEHCRKHVSRM 398 (694)
Q Consensus 321 -ig~~~~ll~i~~sl~l-~~i~~~g~~~~r~~aVLIGi~vG~iva~~lg~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 398 (694)
...+..+++.++++.+ ..+++++|+++|++++++|+++||++++++|.
T Consensus 151 ~~~~~~~~~lalv~l~iil~~~~~~kg~~~~~~iLigIvvG~ila~~lG~------------------------------ 200 (428)
T PRK10720 151 QTPDSKTIIISMVTLAVTVLGSVLFRGFLAIIPILIGVLVGYALSFAMGM------------------------------ 200 (428)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHhccHHHHhHHHHHHHHHHHHHHHhcC------------------------------
Confidence 1222222222222222 23566789999999999999999999998863
Q ss_pred ccccccCCccccCCCccccccccccccccchHHHHHHHHHHHHHHhhhcchhhhhhhhhccCCCCCCcccccccccchhH
Q 048106 399 KQCRVDSSHALKSSPWFRFPYPLQWGTPVFHWKMAVVMCVVSVIASVDSVGSYHASSLLVASRPPTPGVVSRAIGLEGLC 478 (694)
Q Consensus 399 ~~~~vD~s~~v~~apWf~lP~p~~~G~P~F~~~~il~~l~v~lv~~vEsiG~~~A~~~~~~~~~~~~~~i~Rgi~adGl~ 478 (694)
.|++ .+.+++|+++|. |+.|.||+..++.++.++++.++|++||+.++++..+.+..++++++|++.+||++
T Consensus 201 ----~d~~-~v~~a~~~~lP~---~~~P~fd~~~il~l~~~~lv~~~EsiG~~~a~~~~~~~~~~~~~~~~r~l~adGla 272 (428)
T PRK10720 201 ----VDTT-PIIEAHWFALPT---FYTPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLLRDPGLHRSMFANGLS 272 (428)
T ss_pred ----CCHH-HhhcCccccCCC---CCCCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCccccchHhhhhHH
Confidence 3554 366789999985 56789999999999999999999999999999987643323467899999999999
Q ss_pred HHHHhhhcCCCCcccccccceeeeecccccceehhHHHHHHHHHHHHHHHHHHHHhCChhhhhHHHHHHHHHHHHhhccc
Q 048106 479 SVLAGLWGTGTGSTTLTENVHTIAVTKMGSRRAVEIGAGILIVLSLIGKVGGFIASIPQVMVAGLLCFMWAMLAALGLSN 558 (694)
Q Consensus 479 silAGl~Gtg~p~TtyseNvGvIalTgvaSR~v~~~aa~~LIllgf~PK~~allasIP~pVlGG~livlfg~i~~sGl~~ 558 (694)
|+++|+||+ +|+|+|+||+|++++||++||+++.+++++++++||+||+++++++||.||+||+++++|+++..+|+|+
T Consensus 273 tii~glfG~-~p~tty~en~g~ia~T~v~sr~v~~~a~~~li~lg~~pk~~a~ia~iP~pVlgg~~i~~fg~i~~~Gi~~ 351 (428)
T PRK10720 273 TVISGFFGS-TPNTTYGENIGVMAITRVYSTWVIGGAAIIAILLSCVGKLAAAIQAIPLPVMGGVSLLLYGVIGASGIRV 351 (428)
T ss_pred HHHHHhcCC-CCccccccccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999995 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred c--ccccCCCccceEEEEehhhcccchhhhhhhcCCCCCcccCCCcccccccccCCCCccccccchhhHHHHHhhhhHHH
Q 048106 559 L--RYSEAGSSRNIIIVGLSLFFSLSIPAYFQQYGISPNTNLSVPSYFQPYSVASHGPFRSKYGGVNYVMNTLLSLHVVV 636 (694)
Q Consensus 559 L--~~~~~~~~RN~~IvGlsL~~Glgv~~~f~~~~~~p~~~~~lP~~~~p~~~~~~g~~~t~~~~~~~~l~~ll~sg~~v 636 (694)
+ ++.|+.++||.+|+|+++++|++.... + +..++.+|+..
T Consensus 352 l~~~~~~~~~~~n~~i~~~~l~~g~~~~~~--------------~------------------------~~~~~~~gi~~ 393 (428)
T PRK10720 352 LIESKVDYNKAQNLILTSVILIIGVSGAKV--------------N------------------------IGAAELKGMAL 393 (428)
T ss_pred HHHccCCCCcccchhHHHHHHHHHHHHHHH--------------H------------------------HHHHhcCcHHH
Confidence 9 667777888999999999999986531 0 24678899999
Q ss_pred HHHHHHhhcccCCCCcccccc
Q 048106 637 AFLFAVVLDNTVPGSRQERGV 657 (694)
Q Consensus 637 g~lvaiiLn~~lp~~~~erg~ 657 (694)
|+++|++||+++|..++.|+.
T Consensus 394 g~~~ai~Lnlll~~~~~~~~~ 414 (428)
T PRK10720 394 ATIVGIGLSLIFKLISKLRPE 414 (428)
T ss_pred HHHHHHHHHHHhcccccccCC
Confidence 999999999999987776664
No 6
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=100.00 E-value=5.3e-65 Score=561.02 Aligned_cols=393 Identities=29% Similarity=0.470 Sum_probs=340.5
Q ss_pred CCChHHHHHHHHHHHHHHHHHHhHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHHHhcc---CcceEeccccchHH
Q 048106 183 TPGLVPIGLYGFQHYLSMLGSLILIPLVIVPAMGGSHEDTSNVVSTVLFVSGVTTLLHTFFGS---RLPLIQGSSFNFKH 259 (694)
Q Consensus 183 ~Pp~~~~illGlQH~LaM~~~~IvvPlIia~a~Gl~~~~~~~lIsatl~vsGIaTllQ~~~G~---rLPiv~GpSfafi~ 259 (694)
|||+.+++++|+||+++|+++++++|++++.++ ++++|+++++|+++|+|||+|++|+++++ |+|.+||+||+|+.
T Consensus 1 ~~~~~~~~~lglQh~l~~~~~~i~~p~iv~~~~-l~~~~~~~li~at~~~sgi~Tllq~~~~~~~~~lp~~~G~sfa~i~ 79 (415)
T TIGR00801 1 RPPFLQTLVLGLQHLLAMFGGTVLVPLLVGLAP-LSAEQTQYLVSISLLTSGIGTLLQLFRTGGQIGLPSYLGSSFAFVS 79 (415)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CCHHHHHHHHHHHHHHHHHHHHHHHhhhcCceeeeeeecCcHHHHH
Confidence 689999999999999999999999999999999 99999999999999999999999998644 36999999998864
Q ss_pred ---------HHHHHHHHHHHHHHHHHHHHhh--h-HHHHHHHHhCCceehhhhhhhhhhhhhcccccccchh------hh
Q 048106 260 ---------IMKELQGAIIIGSVFQAFLGYS--G-LMSLLLRLINPVVVAPTIAAVGLSFYSYGFPLVGTCL------EI 321 (694)
Q Consensus 260 ---------~~~~~~GaiivaGl~~ilLg~t--g-l~~~L~r~fpPvV~g~vV~lIGlsL~~~g~~~~g~~~------~i 321 (694)
.+++++|+++++|+++++++++ + .+++++|+|||.|+++++++||++|+..++++++... ++
T Consensus 80 ~~~~~~~~~~~~~~~g~~i~~gl~~~ll~~~~~~~~~~~i~~~~Pp~v~g~iv~~IGl~L~~i~l~~~~g~~~~~~~~~~ 159 (415)
T TIGR00801 80 PMIAIGSGLGIPAIMGALIATGLVYTLLSLLIKKLGPRWLMKLFPPVVTGPVVMLIGLSLIPVAVKMAAGGEAAMSSATY 159 (415)
T ss_pred HHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchhHHHhHHHHHHHHHHHHHHHhccCCCccccccc
Confidence 2578999999999999999984 3 3578899999999999999999999999999875421 12
Q ss_pred hHHHHHHHHHHHH-HHHHHHhhhhhhHHHhhHHHHHHHHHHHHHHhhhhccCcCcccccCCCcccccccccccccccccc
Q 048106 322 GVVQILLVILFSL-YLRKISVIGHRIFLIYAVPLGLAITWAAAFLLTETGAYNYKECDVNVPVSNIISEHCRKHVSRMKQ 400 (694)
Q Consensus 322 g~~~~ll~i~~sl-~l~~i~~~g~~~~r~~aVLIGi~vG~iva~~lg~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 400 (694)
+.+..+.+.++++ .+..+++++|+++|++++++|+++||++++.+|.
T Consensus 160 ~~~~~~~vg~~~l~~~vl~~~~~~g~~~~~aiLigiv~g~i~a~~lg~-------------------------------- 207 (415)
T TIGR00801 160 GSLENLGVAFVVLALIILLNRFGKGFLKSISILIGILVGYILALFMGI-------------------------------- 207 (415)
T ss_pred CchhhHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcCC--------------------------------
Confidence 2233222222222 2245678889999999999999999999998763
Q ss_pred ccccCCccccCCCccccccccccccccchHHHHHHHHHHHHHHhhhcchhhhhhhhhccCCCCCCcccccccccchhHHH
Q 048106 401 CRVDSSHALKSSPWFRFPYPLQWGTPVFHWKMAVVMCVVSVIASVDSVGSYHASSLLVASRPPTPGVVSRAIGLEGLCSV 480 (694)
Q Consensus 401 ~~vD~s~~v~~apWf~lP~p~~~G~P~F~~~~il~~l~v~lv~~vEsiG~~~A~~~~~~~~~~~~~~i~Rgi~adGl~si 480 (694)
+|+++ +.++||+++|.+++|| |.||+..++.++.+++++++|++|++.++++..+++...+++++|++.+||++|+
T Consensus 208 --~~~~~-v~~~~~~~lP~~~~~g-~~f~~~~~~~~~~i~lv~~~es~g~~~a~a~~~g~~~~~~~~~~r~l~adGl~~i 283 (415)
T TIGR00801 208 --VDFSP-VIDAPWFSLPTPFTFG-PSFEWPAILTMLPVAIVSLVESIGDITATADVSGRDLSGDPRLHRGVLADGLATL 283 (415)
T ss_pred --ccchh-hccCcccccCCccCCC-ceecHHHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCCCCCccccchHHHhhHHHH
Confidence 45543 5678999999998888 7999999999999999999999999999998875433226789999999999999
Q ss_pred HHhhhcCCCCcccccccceeeeecccccceehhHHHHHHHHHHHHHHHHHHHHhCChhhhhHHHHHHHHHHHHhhccccc
Q 048106 481 LAGLWGTGTGSTTLTENVHTIAVTKMGSRRAVEIGAGILIVLSLIGKVGGFIASIPQVMVAGLLCFMWAMLAALGLSNLR 560 (694)
Q Consensus 481 lAGl~Gtg~p~TtyseNvGvIalTgvaSR~v~~~aa~~LIllgf~PK~~allasIP~pVlGG~livlfg~i~~sGl~~L~ 560 (694)
++|+||+ +|+|+|+||+|+++.||++||++.+++|+++++++|+||+++++++||.||+||+++++|+++..+|+|.+.
T Consensus 284 ~aglfG~-~p~t~~sen~g~~~~T~~~sr~~~~~~a~~~i~~~l~pk~~~l~~~iP~~vlgg~~l~~~~~i~~~gi~~l~ 362 (415)
T TIGR00801 284 LAGLFGG-FPNTTFAQNIGVIALTRVASRWVIVGAAVILIALGFFPKIAALITSIPSPVLGGASIVMFGMIAASGIRILI 362 (415)
T ss_pred HHHhcCC-CCCcchhhhheeeeecCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999995 999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cccCCCccceEEEEehhhcccchhhhhhhcCCCCCcccCCCcccccccccCCCCccccccchhhHHHHHhhhhHHHHHHH
Q 048106 561 YSEAGSSRNIIIVGLSLFFSLSIPAYFQQYGISPNTNLSVPSYFQPYSVASHGPFRSKYGGVNYVMNTLLSLHVVVAFLF 640 (694)
Q Consensus 561 ~~~~~~~RN~~IvGlsL~~Glgv~~~f~~~~~~p~~~~~lP~~~~p~~~~~~g~~~t~~~~~~~~l~~ll~sg~~vg~lv 640 (694)
+.+.+++||++|+|+|+++|++++. +|++++. -| +++||+++|+++
T Consensus 363 ~~~~~~~r~~~i~~~s~~~g~~~~~--------------~p~~~~~------~p--------------~~~~g~~~g~~~ 408 (415)
T TIGR00801 363 RNKLDNRRNRNIIAASVGLGLGVTG--------------VPDIFGN------FP--------------LLLSGIALAGIV 408 (415)
T ss_pred hCccCcccceehHHHHHHHHHHHhc--------------cHHHHhh------Cc--------------hhcccHHHHHHH
Confidence 7766559999999999999999762 2333321 01 678999999999
Q ss_pred HHhhccc
Q 048106 641 AVVLDNT 647 (694)
Q Consensus 641 aiiLn~~ 647 (694)
|++||++
T Consensus 409 ai~Ln~~ 415 (415)
T TIGR00801 409 AILLNLI 415 (415)
T ss_pred HHHHhcC
Confidence 9999974
No 7
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=100.00 E-value=1.7e-63 Score=547.21 Aligned_cols=389 Identities=31% Similarity=0.492 Sum_probs=340.5
Q ss_pred HHHHHHHHHHHHhHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHH----HhccCcceEeccccchHH---------
Q 048106 193 GFQHYLSMLGSLILIPLVIVPAMGGSHEDTSNVVSTVLFVSGVTTLLHT----FFGSRLPLIQGSSFNFKH--------- 259 (694)
Q Consensus 193 GlQH~LaM~~~~IvvPlIia~a~Gl~~~~~~~lIsatl~vsGIaTllQ~----~~G~rLPiv~GpSfafi~--------- 259 (694)
|+||+++|+++++++|+++++++|+|++|++.+++++++++||+|++|+ .+|+|+|+++||||+|..
T Consensus 1 ~~Qh~l~~~~~~i~~p~i~~~a~gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~~~~~~~~~~ 80 (406)
T TIGR03173 1 GLQHVLAMYAGAVAVPLIVGGALGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVGPMIAIGAGG 80 (406)
T ss_pred CccchHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHHHHHHHhhhh
Confidence 6899999999999999999999999999999999999999999999998 479999999999998764
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhCCceehhhhhhhhhhhhhcccccccchh---hhhHHHHHHHHHHHH-H
Q 048106 260 IMKELQGAIIIGSVFQAFLGYSGLMSLLLRLINPVVVAPTIAAVGLSFYSYGFPLVGTCL---EIGVVQILLVILFSL-Y 335 (694)
Q Consensus 260 ~~~~~~GaiivaGl~~ilLg~tgl~~~L~r~fpPvV~g~vV~lIGlsL~~~g~~~~g~~~---~ig~~~~ll~i~~sl-~ 335 (694)
.+++++|+++++|+++++++. +++|++|+|||.|+|.++++||++|...++++..+.. +.+.+..+.+.+.++ .
T Consensus 81 ~~~~~~ga~~v~Gii~illg~--~~~~l~~~iPp~v~G~~i~~IGl~l~~~~~~~~~g~~~~~~~~~~~~~~l~l~~l~~ 158 (406)
T TIGR03173 81 GLGAIFGAVIVAGLFVILLAP--FFSKLVRFFPPVVTGTVITLIGLSLMPVAINWAAGGAGAPDFGSPQNLGLALLTLVI 158 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHH--HHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHHhccCCCcccccchHHHHHHHHHHHH
Confidence 367899999999999999994 7899999999999999999999999999887764321 122222222111111 2
Q ss_pred HHHHHhhhhhhHHHhhHHHHHHHHHHHHHHhhhhccCcCcccccCCCccccccccccccccccccccccCCccccCCCcc
Q 048106 336 LRKISVIGHRIFLIYAVPLGLAITWAAAFLLTETGAYNYKECDVNVPVSNIISEHCRKHVSRMKQCRVDSSHALKSSPWF 415 (694)
Q Consensus 336 l~~i~~~g~~~~r~~aVLIGi~vG~iva~~lg~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~vD~s~~v~~apWf 415 (694)
+..+.+++|+++|++++++|+++||++++.+|. +|++ .+.+++|+
T Consensus 159 ~il~~~~~~~~~~~~aiLi~ivvg~iva~~~g~----------------------------------~~~~-~i~~~~~~ 203 (406)
T TIGR03173 159 ILLLNRFGKGFLRSIAVLLGLVVGTIVAAALGM----------------------------------VDFS-GVAEAPWF 203 (406)
T ss_pred HHHHHHHhhhHHHHhHHHHHHHHHHHHHHHhcC----------------------------------CCch-hhccCCee
Confidence 233466789999999999999999999998763 3444 25678999
Q ss_pred ccccccccccccchHHHHHHHHHHHHHHhhhcchhhhhhhhhccCCCCCCcccccccccchhHHHHHhhhcCCCCccccc
Q 048106 416 RFPYPLQWGTPVFHWKMAVVMCVVSVIASVDSVGSYHASSLLVASRPPTPGVVSRAIGLEGLCSVLAGLWGTGTGSTTLT 495 (694)
Q Consensus 416 ~lP~p~~~G~P~F~~~~il~~l~v~lv~~vEsiG~~~A~~~~~~~~~~~~~~i~Rgi~adGl~silAGl~Gtg~p~Ttys 495 (694)
.+|.+++|+.|+||+..++.++.+++++++|++|++.++++..+ ++.++++++|++.+||++|+++|+||+ +|+|+|+
T Consensus 204 ~~P~~~~~~~P~f~~~~~~~~~~~~lv~~~esig~~~a~~~~~g-~~~~~~~~~~~l~~~Gi~~i~aglfG~-~p~t~~~ 281 (406)
T TIGR03173 204 ALPTPFHFGAPTFDLVAILTMIIVYLVSMVETTGDFLALGEITG-RPITEKDLAGGLRADGLGSALGGLFNT-FPYTSFS 281 (406)
T ss_pred eCCCCCcCCCCeeCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCCchhccchHHhccHHHHHHHHhCC-CCCcchh
Confidence 99999889999999999999999999999999999999998754 455677899999999999999999995 9999999
Q ss_pred ccceeeeecccccceehhHHHHHHHHHHHHHHHHHHHHhCChhhhhHHHHHHHHHHHHhhccccccccCCCccceEEEEe
Q 048106 496 ENVHTIAVTKMGSRRAVEIGAGILIVLSLIGKVGGFIASIPQVMVAGLLCFMWAMLAALGLSNLRYSEAGSSRNIIIVGL 575 (694)
Q Consensus 496 eNvGvIalTgvaSR~v~~~aa~~LIllgf~PK~~allasIP~pVlGG~livlfg~i~~sGl~~L~~~~~~~~RN~~IvGl 575 (694)
||+|+++.||++||++.+++|+++++++++||+++++++||.+|+||+++++|+++..+|++.+.+.+.+++||++|+|+
T Consensus 282 ~~~~~~~~tg~~sr~~~~~~~~~lil~~l~~~~~~l~~~iP~~vlgg~~l~~~~~i~~~g~~~l~~~~~~~~rn~~i~g~ 361 (406)
T TIGR03173 282 QNVGLVQLTGVKSRYVVAAAGVILVLLGLFPKLAALVASIPQPVLGGAGLVMFGMVAASGIRILSKVDFDRRRNLLIVAV 361 (406)
T ss_pred hhHHHHHHhCCCchHhHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHhCcccCcceehhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998887777779999999
Q ss_pred hhhcccchhhhhhhcCCCCCcccCCCcccccccccCCCCccccccchhhHHHHHhhhhHHHHHHHHHhhcccCC
Q 048106 576 SLFFSLSIPAYFQQYGISPNTNLSVPSYFQPYSVASHGPFRSKYGGVNYVMNTLLSLHVVVAFLFAVVLDNTVP 649 (694)
Q Consensus 576 sL~~Glgv~~~f~~~~~~p~~~~~lP~~~~p~~~~~~g~~~t~~~~~~~~l~~ll~sg~~vg~lvaiiLn~~lp 649 (694)
++++|++.+. .|+.++++|+++ +.+++||+++|+++|++||+++|
T Consensus 362 ~~~~g~~~~~-------~p~~~~~~p~~~----------------------~~~~~~~~~~g~~~ai~l~~~~p 406 (406)
T TIGR03173 362 SLGLGLGPTV-------VPEFFSQLPAWA----------------------QTLFSSGIAVGAISAILLNLLFN 406 (406)
T ss_pred HHHHHHHHHh-------hHHHHHHChHHH----------------------HHHHhCcHHHHHHHHHHHHhhcC
Confidence 9999998763 245566677665 46899999999999999999987
No 8
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []. Characterised proteins in this entry include: Xanthine permease PbuX, involved in cellualar xanthine transport [] Uric acid permeases which promotes uptake of uric acid into the cell in limiting-nitrogen conditions [] Uracil permease [] Sodium-dependent vitamin C transporter, a sodium/ascorbate cotransporter mediating electrogenic uptake of Vitamin C [] These proteins generally contain 12 transmembrane regions. Many members of this family are uncharacterised and may transport other substrates eg. RutG is likely to transport pyrimidines into the cell [].; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3QE7_A.
Probab=100.00 E-value=1.1e-63 Score=546.00 Aligned_cols=364 Identities=33% Similarity=0.538 Sum_probs=279.0
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHHH-hccCcceEeccccchHH------
Q 048106 187 VPIGLYGFQHYLSMLGSLILIPLVIVPAMGGSHEDTSNVVSTVLFVSGVTTLLHTF-FGSRLPLIQGSSFNFKH------ 259 (694)
Q Consensus 187 ~~~illGlQH~LaM~~~~IvvPlIia~a~Gl~~~~~~~lIsatl~vsGIaTllQ~~-~G~rLPiv~GpSfafi~------ 259 (694)
+|++++|+||+++|+++++++|+++++++|+ ++|+++++++++++||++|++|++ +|+|+|+++|+||+++.
T Consensus 1 ~~~i~~glQ~~l~m~~~~iv~P~il~~~~g~-~~~~~~li~at~l~sgi~Tllq~~~~g~~lpl~~G~s~~~~~~~~~~~ 79 (389)
T PF00860_consen 1 GKEILLGLQHFLAMFYIIIVVPLILAAAFGL-DADTAALISATFLVSGIATLLQGLPAGHRLPLVPGPSFAFIFAFMIVI 79 (389)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHTTTS------------HHHHHHHHHHHHHHHHHHTTT-----EEE-GGGHHHHHGGG
T ss_pred CccHHHHHHHHHHHHHHHHHhHHHHhhcccc-cchhhHHHHHHHHHHHHHHHHHHhcCCCceecccccchhhhhhhhccc
Confidence 4789999999999999999999999999999 778889999999999999999999 89999999999997653
Q ss_pred --------HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhCCceehhhhhhhhhhhhhcccccccchhh------hhHHH
Q 048106 260 --------IMKELQGAIIIGSVFQAFLGYSGLMSLLLRLINPVVVAPTIAAVGLSFYSYGFPLVGTCLE------IGVVQ 325 (694)
Q Consensus 260 --------~~~~~~GaiivaGl~~ilLg~tgl~~~L~r~fpPvV~g~vV~lIGlsL~~~g~~~~g~~~~------ig~~~ 325 (694)
.+++++|+++++|+++++++++++++|++|+|||.|+++++++||++|.+.++++++.... .+...
T Consensus 80 g~~~~~~~~~~~~~g~~~i~gi~~~~l~~~g~~~~l~~~~pp~v~g~v~~~IGl~L~~~~~~~~~~~~~~~~~~~~~~~~ 159 (389)
T PF00860_consen 80 GMAESGGYGLQAALGAVLISGILFILLGLTGLRKRLRRLFPPVVKGAVVLLIGLSLAPIGLKNAGGIWGNPDGLLVGDGK 159 (389)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHHHHHTT-SH-HHHHH--HHHHHHHHHHHHHHHHHHHHHHTTSS---BTT-B---HH
T ss_pred ccccchhhchhhhhhHHHHHHHHHHHHHHhchHHHHHHHhChhheEeeEeeehhhhhhhHhhcccccccccccccccccc
Confidence 3688999999999999999999999999999999999999999999999999999876541 22222
Q ss_pred HHH-HHHHHHHHHHHHhhhhhhHHHhhHHHHHHHHHHHHHHhhhhccCcCcccccCCCcccccccccccccccccccccc
Q 048106 326 ILL-VILFSLYLRKISVIGHRIFLIYAVPLGLAITWAAAFLLTETGAYNYKECDVNVPVSNIISEHCRKHVSRMKQCRVD 404 (694)
Q Consensus 326 ~ll-~i~~sl~l~~i~~~g~~~~r~~aVLIGi~vG~iva~~lg~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~vD 404 (694)
... .+...+....++.++++++|++++++|+++||++++++|. +|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~ailigi~~g~i~~~~~g~----------------------------------~~ 205 (389)
T PF00860_consen 160 NLGLAVLTLLFILLLSLFLKGFLRKGAILIGIIAGWIVAAILGV----------------------------------VD 205 (389)
T ss_dssp HHHHHHHHHHHHHHHHHSSSTTTTTHHHHHHHHHHHHHHHHHHH----------------------------------TT
T ss_pred ccccccccchhhhhhhhhhhhhcccccchhhhhhhhhhhhcccc----------------------------------cc
Confidence 222 1112222345677899999999999999999999999984 34
Q ss_pred CCccccCCCccccccccccccccchHHHHHHHHHHHHHHhhhcchhhhhhhhhccCCCCCCcccccccccchhHHHHHhh
Q 048106 405 SSHALKSSPWFRFPYPLQWGTPVFHWKMAVVMCVVSVIASVDSVGSYHASSLLVASRPPTPGVVSRAIGLEGLCSVLAGL 484 (694)
Q Consensus 405 ~s~~v~~apWf~lP~p~~~G~P~F~~~~il~~l~v~lv~~vEsiG~~~A~~~~~~~~~~~~~~i~Rgi~adGl~silAGl 484 (694)
+++.+.++||+++|++++|+.|.|++..+++++.+++++++|++||+.++++..+.+.+++++++|++.+||++++++|+
T Consensus 206 ~~~~~~~~~~~~~p~~~~~g~p~f~~~~i~~~~~~~lv~~~es~G~~~a~~~~~~~~~~~~~~~~r~l~~dg~~~~l~gl 285 (389)
T PF00860_consen 206 FSPSVSSAPWFSLPSPFPFGWPSFDPGAILTFLIFALVAMFESIGTIVAVARIAGKDDPRPPRIRRGLLADGLGTILAGL 285 (389)
T ss_dssp SSH-HHHS-SS--------------HHHHHHHTHHHHHHHHHHHHHHHHHHHHHTS-TCCCCCHHHHHHHHHHHHHHHHH
T ss_pred cCcccccccccccccccccccccccHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCCccchhhcccceeeeeeeeechh
Confidence 54226789999999999999999999999999999999999999999999998865555588899999999999999999
Q ss_pred hcCCCCcccccccceeeeecccccceehhHHHHHHHHHHHHHHHHHHHHhCChhhhhHHHHHHHHHHHHhhccccccccC
Q 048106 485 WGTGTGSTTLTENVHTIAVTKMGSRRAVEIGAGILIVLSLIGKVGGFIASIPQVMVAGLLCFMWAMLAALGLSNLRYSEA 564 (694)
Q Consensus 485 ~Gtg~p~TtyseNvGvIalTgvaSR~v~~~aa~~LIllgf~PK~~allasIP~pVlGG~livlfg~i~~sGl~~L~~~~~ 564 (694)
||+ +|+|+|+||+|+++.||++|||++..+++++++++++|||++++++||.+|+||+++++||+++++|++++++.|+
T Consensus 286 ~G~-~~~t~~~en~g~i~~t~v~Sr~~~~~a~~~~i~~~~~p~~~~l~~~IP~~v~gg~~lv~~g~i~~~gi~~i~~~~~ 364 (389)
T PF00860_consen 286 FGT-SPTTTYSENAGGIAATGVASRRVGLTAGVILILFGLSPKFAPLFASIPSPVIGGPLLVLFGMIMMSGIRNIDWVDL 364 (389)
T ss_dssp HT----EEE-HHHHHHHHHHTB--HHHHHHHHHHHHHHT--HHHHHHHTTS-HHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred hcC-CCCccccccchhhhhhccccceeeeHHHHHHHHHhhHHHHHHHHHHHHHHHhccchHHHHHHHHHHHhHhheeccc
Confidence 997 9999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCccceEEEEehhhcccchhhh
Q 048106 565 GSSRNIIIVGLSLFFSLSIPAY 586 (694)
Q Consensus 565 ~~~RN~~IvGlsL~~Glgv~~~ 586 (694)
++.||.+++++++.+|++++.+
T Consensus 365 ~~~r~~~iv~~~l~~g~~i~~~ 386 (389)
T PF00860_consen 365 DSARNAFIVGLSLPLGLSIAFG 386 (389)
T ss_dssp -SHHHHHHHHHHHHHHHH----
T ss_pred CccccHHHHHHhHHHHHHHhcc
Confidence 8899999999999999998753
No 9
>COG2252 Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism]
Probab=99.94 E-value=6.6e-26 Score=247.97 Aligned_cols=341 Identities=16% Similarity=0.232 Sum_probs=261.2
Q ss_pred cceecCCCCC-hHHHHHHHHHHHHHHHHHHhHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHHHhccCcceEeccc
Q 048106 176 MKYQLRDTPG-LVPIGLYGFQHYLSMLGSLILIPLVIVPAMGGSHEDTSNVVSTVLFVSGVTTLLHTFFGSRLPLIQGSS 254 (694)
Q Consensus 176 l~y~l~d~Pp-~~~~illGlQH~LaM~~~~IvvPlIia~a~Gl~~~~~~~lIsatl~vsGIaTllQ~~~G~rLPiv~GpS 254 (694)
-.|+++|+-. .+++++.|+..+++|.|.+.++|.|+++ .|++. ..+.-++.+.++++|+++.++ +|+|+.++|.
T Consensus 8 ~~F~l~~~~t~vrtEiiAGlTTFltM~YIl~VnP~IL~~-ag~~~---~av~~AT~l~a~~gs~~mgl~-An~P~alapg 82 (436)
T COG2252 8 RFFKLKEHGTTVRTEVIAGLTTFLTMAYIVFVNPQILGA-AGMPV---GAVFVATCLAAAIGSIAMGLY-ANLPIALAPG 82 (436)
T ss_pred HHhCccccCchHHHHHHHHHHHHHHHHHhheecHHHHHh-cCCCc---hhHHHHHHHHHHHHHHHHHHH-HcCchhhcch
Confidence 4788888875 7899999999999999999999999987 46774 467889999999999999999 9999999999
Q ss_pred cch------H------HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhCCceehhhhhhhhhhhhhcccccccch----
Q 048106 255 FNF------K------HIMKELQGAIIIGSVFQAFLGYSGLMSLLLRLINPVVVAPTIAAVGLSFYSYGFPLVGTC---- 318 (694)
Q Consensus 255 faf------i------~~~~~~~GaiivaGl~~ilLg~tgl~~~L~r~fpPvV~g~vV~lIGlsL~~~g~~~~g~~---- 318 (694)
+.. . -.||+++|+++++|+++++++++|+++|++|.+|-.+.-.+.++||+++...|+++.|-.
T Consensus 83 mglnAfFaftvv~~~gi~wq~AL~aVF~sGiif~ils~t~iR~~ii~~IP~~lk~ai~aGIGlFia~IgL~~~Givv~~~ 162 (436)
T COG2252 83 MGLNAFFAFTVVLGMGLSWQVALGAVFLSGIIFLLLSLTGIREWIINAIPRSLKLAIGAGIGLFIALIGLKNAGIVVANP 162 (436)
T ss_pred hhHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhCCeEEecC
Confidence 832 1 148999999999999999999999999999999999999999999999999999977631
Q ss_pred ---hhhh---HHHHHHHHHHHHHH-HHHHhhhhhhHHHhhHHHHHHHHHHHHHHhhhhccCcCcccccCCCccccccccc
Q 048106 319 ---LEIG---VVQILLVILFSLYL-RKISVIGHRIFLIYAVPLGLAITWAAAFLLTETGAYNYKECDVNVPVSNIISEHC 391 (694)
Q Consensus 319 ---~~ig---~~~~ll~i~~sl~l-~~i~~~g~~~~r~~aVLIGi~vG~iva~~lg~~g~~~~~~~~~~~p~~~~~~~~~ 391 (694)
+..| .+..++. ++.+.+ ..+ ..+.. ..++++|++...++++.+|....+. +
T Consensus 163 ~tlv~LG~~~~p~vll~-i~G~~l~~~L---~~~~i-~Gaili~i~~~t~~g~~~g~~~~~~--~--------------- 220 (436)
T COG2252 163 ATLVALGDFTSPGVLLA-ILGLLLIIVL---VSRKI-KGAILIGILVTTILGIILGIDVHFG--G--------------- 220 (436)
T ss_pred cceEEeecCCCchHHHH-HHHHHHHHHH---HHhhc-cHhhhHHHHHHHHHHHHhccccccc--c---------------
Confidence 1122 2222221 111111 111 11111 3789999999999999987532110 0
Q ss_pred cccccccccccccCCccccCCCcccccc--ccccccccchHHHHHHHHHHHHHHhhhcchhhhhhhhhccCCC--CCCcc
Q 048106 392 RKHVSRMKQCRVDSSHALKSSPWFRFPY--PLQWGTPVFHWKMAVVMCVVSVIASVDSVGSYHASSLLVASRP--PTPGV 467 (694)
Q Consensus 392 ~~~~~~~~~~~vD~s~~v~~apWf~lP~--p~~~G~P~F~~~~il~~l~v~lv~~vEsiG~~~A~~~~~~~~~--~~~~~ 467 (694)
....-|.. .|. .+++..=...+..+...+...+++.+|++|++.++++.++-.+ ...++
T Consensus 221 ----------------~~~~~p~~-~~~~~~~d~~~~~~~~~~~~~if~f~~~~~FD~~GTl~gv~~~ag~~~~~g~~~~ 283 (436)
T COG2252 221 ----------------LVGAPPSL-SPIFGQLDLSGNLSLAAFAPVIFTFFFVDLFDTLGTLIGVASKAGLLDKNGKMPR 283 (436)
T ss_pred ----------------cccCCCCc-cchhhHhhhccchhhHHHHHHHHHHHHHHHhcchHHHHHHHHhcCCcCCCCCccc
Confidence 00000000 011 1111100222445567788999999999999999998775322 22457
Q ss_pred cccccccchhHHHHHhhhcCCCCcccccccceeeeecccccceehhHHHHHHHHHHHHHHHHHHHHhCChhhhhHHHHHH
Q 048106 468 VSRAIGLEGLCSVLAGLWGTGTGSTTLTENVHTIAVTKMGSRRAVEIGAGILIVLSLIGKVGGFIASIPQVMVAGLLCFM 547 (694)
Q Consensus 468 i~Rgi~adGl~silAGl~Gtg~p~TtyseNvGvIalTgvaSR~v~~~aa~~LIllgf~PK~~allasIP~pVlGG~livl 547 (694)
++|.+.+|++++++++++|| .++|+|-|+...++.-+-+--.++..+.+|++.+.+.| ++..||..+.++++++
T Consensus 284 ~~~al~~D~v~t~~ga~~Gt-S~~t~yIESaaGva~GgrTGltavv~g~lFl~~lf~~P----l~~~vP~~AtapaLi~- 357 (436)
T COG2252 284 IGKALLADSVATVVGALFGT-STVTAYIESAAGVAAGGRTGLTAVVTGLLFLLSLFFSP----LAALVPGYATAPALII- 357 (436)
T ss_pred cchHHHHhHHHHHHHHhcCC-cchhhhhhcccccccccccccHHHHHHHHHHHHHHHHH----HHHhCcHhhhhHHHHH-
Confidence 89999999999999999998 99999999999999855555558999999999999888 9999999999999997
Q ss_pred HHHHHHhhccccccccCCC
Q 048106 548 WAMLAALGLSNLRYSEAGS 566 (694)
Q Consensus 548 fg~i~~sGl~~L~~~~~~~ 566 (694)
.|.+|+++++.++++|+.+
T Consensus 358 vG~lM~~~v~~id~~d~~e 376 (436)
T COG2252 358 VGALMLSSVKQIDWSDFTE 376 (436)
T ss_pred HHHHHHhhhccCCchhhhh
Confidence 6999999999999887643
No 10
>TIGR00843 benE benzoate transporter. The benzoate transporter family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter.
Probab=99.81 E-value=6.5e-18 Score=184.65 Aligned_cols=305 Identities=17% Similarity=0.242 Sum_probs=210.5
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHHHhccCcceEecccc---chH------
Q 048106 188 PIGLYGFQHYLSMLGSLILIPLVIVPAMGGSHEDTSNVVSTVLFVSGVTTLLHTFFGSRLPLIQGSSF---NFK------ 258 (694)
Q Consensus 188 ~~illGlQH~LaM~~~~IvvPlIia~a~Gl~~~~~~~lIsatl~vsGIaTllQ~~~G~rLPiv~GpSf---afi------ 258 (694)
..+..|+--++.-+++.+++=+=-++++|++++|++..+++..+.+|++|++|+++ .|+|++++.|- +.+
T Consensus 22 s~~~aG~va~lvg~~~~~~iv~~a~~~~g~s~aq~~swl~a~~~~~Gl~ti~lS~~-~r~Pi~~awStPGaAll~~~~~~ 100 (395)
T TIGR00843 22 PTLIAGFLAVLIGYAGPAAIFFQAAIKAGASTAMIIGWITAIGIAAAVSGIFLSIR-FKTPVLTAWSAPGAALLVTGFPG 100 (395)
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCeeeecCchHHHHHHHhcCC
Confidence 46788888888888877666555566789999999999999999999999999987 69999999993 111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhCCceehhhhhhhhhhhhhcccccccchhhhhHHHHHHHHHHHHHHHH
Q 048106 259 HIMKELQGAIIIGSVFQAFLGYSGLMSLLLRLINPVVVAPTIAAVGLSFYSYGFPLVGTCLEIGVVQILLVILFSLYLRK 338 (694)
Q Consensus 259 ~~~~~~~GaiivaGl~~ilLg~tgl~~~L~r~fpPvV~g~vV~lIGlsL~~~g~~~~g~~~~ig~~~~ll~i~~sl~l~~ 338 (694)
..+.++.|+.+++|++.+++|.+|+++|++|++|+.+...++++|.+.+....++.... .+.. ...++..|
T Consensus 101 ~~~~eavGAfiv~g~lilllGltG~f~rl~~~IP~~Va~amLAGIlL~f~l~~~~a~~~-----~pll-~~~mll~~--- 171 (395)
T TIGR00843 101 ISLNEAIAAFITAAALIFLCGITGLFAKLLKIIPHGIAAAMLAGILFQFGLGAFAALDG-----LFLI-CFSMLLCW--- 171 (395)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH-----hHHH-HHHHHHHH---
Confidence 13789999999999999999999999999999999999999988877764333322211 1111 11112222
Q ss_pred HHhhhhhhHHHhhHHHHHHHHHHHHHHhhhhccCcCcccccCCCccccccccccccccccccccccCCccccCCCccccc
Q 048106 339 ISVIGHRIFLIYAVPLGLAITWAAAFLLTETGAYNYKECDVNVPVSNIISEHCRKHVSRMKQCRVDSSHALKSSPWFRFP 418 (694)
Q Consensus 339 i~~~g~~~~r~~aVLIGi~vG~iva~~lg~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~vD~s~~v~~apWf~lP 418 (694)
..+||+++++++++.+++|.++++.+|.. |.++ + .| .++
T Consensus 172 --l~~~r~~Pr~avl~aLlvG~iva~~~G~~----------------------------------~~~~-~---~~-~l~ 210 (395)
T TIGR00843 172 --LASKAFAPRYAMIAALICGIAFSFALGDM----------------------------------NPTD-L---DF-KIA 210 (395)
T ss_pred --HHHHHhcchHHHHHHHHHHHHHHHHhcCC----------------------------------Cccc-c---cc-ccc
Confidence 23467778899999999999999887632 1111 1 11 112
Q ss_pred cccccccccchHHHHHH-HHHHHHHHhhhcchhhhhhhhhccCCCCCCcccccccccchhHHHHHhhhcCCCC------c
Q 048106 419 YPLQWGTPVFHWKMAVV-MCVVSVIASVDSVGSYHASSLLVASRPPTPGVVSRAIGLEGLCSVLAGLWGTGTG------S 491 (694)
Q Consensus 419 ~p~~~G~P~F~~~~il~-~l~v~lv~~vEsiG~~~A~~~~~~~~~~~~~~i~Rgi~adGl~silAGl~Gtg~p------~ 491 (694)
.| .|..|+||+...+. .+..+++.+....-.=.++.+..+++.+ .++-+.++|++|++++.||. .+ +
T Consensus 211 ~p-~~~~P~fs~~a~~~l~lPl~~vtm~~qnlpgiavl~aaGy~~p----~~~~~~~tGl~sll~ApfGg-~~~nlaait 284 (395)
T TIGR00843 211 LP-QFIAPDFSFAHSLNLALPLFLVSLAGQFAPGIAALKAAGYNAP----AKPIIAAAGLAALFAAFAGG-ISIGIAAIT 284 (395)
T ss_pred cc-eeeCCCCCHHHHHHHHHHHHHHHHHhcCchHHHHHHHcCCCCC----chHHHHHHHHHHHHHhccCC-chhhhhHHh
Confidence 12 46678888766543 3344444443321111233333333332 58889999999999999994 65 2
Q ss_pred ccccccceeeeecccccce--ehhHHHHHHHHHHHH-HHHHHHHHhCChhhhhHHH-HHHHHHHH
Q 048106 492 TTLTENVHTIAVTKMGSRR--AVEIGAGILIVLSLI-GKVGGFIASIPQVMVAGLL-CFMWAMLA 552 (694)
Q Consensus 492 TtyseNvGvIalTgvaSR~--v~~~aa~~LIllgf~-PK~~allasIP~pVlGG~l-ivlfg~i~ 552 (694)
++--.+- ..=+-.+|| +.+.+|++.+++|++ +.+..+++.+|...+..+. +.+++.+.
T Consensus 285 aAic~G~---~ah~d~~rR~~a~i~~Gv~yll~glfag~i~~l~~~~P~~li~~laGlAll~~~~ 346 (395)
T TIGR00843 285 AAICMGK---DAHEDKDKRWIAAAAAGIFYLLAGLFAGAITALFAALPKELIAALAGLALLGAIA 346 (395)
T ss_pred HHHhcCc---ccccCcCccchHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Confidence 2211111 112223344 778899999999999 9999999999998876643 44455554
No 11
>PF03594 BenE: Benzoate membrane transport protein; InterPro: IPR004711 The benzoate:H+ symporter (BenE) family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter [, ]. Proteins in this family are about 400 residues in length and probably span the membrane 12 times. They exhibit about 30% identity to each other and limited sequence similarity to members of the aromatic acid:H+symporter (AAHS) family of the major facilitator superfamily (MFS). However the degree of similarity with the latter proteins is insufficient to establish homology. Thus, in spite of the sequence similarity and their similar substrate specificities, the BenE family must be considered separately. This family is classified as TC number 2.A.46 under the transporter classification (TC) system [].; GO: 0016021 integral to membrane
Probab=99.51 E-value=3e-12 Score=138.66 Aligned_cols=302 Identities=23% Similarity=0.292 Sum_probs=203.7
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHHHhccCcceEecccc---chHH-----
Q 048106 188 PIGLYGFQHYLSMLGSLILIPLVIVPAMGGSHEDTSNVVSTVLFVSGVTTLLHTFFGSRLPLIQGSSF---NFKH----- 259 (694)
Q Consensus 188 ~~illGlQH~LaM~~~~IvvPlIia~a~Gl~~~~~~~lIsatl~vsGIaTllQ~~~G~rLPiv~GpSf---afi~----- 259 (694)
.++..|+--++.-+++.+++=+=.+++.|++++|+..=+-+..+.+|+.|+.-++. .|.|++..=|- +++.
T Consensus 6 s~~~aG~va~lvg~tg~~aiv~qaa~a~g~s~~q~~SWl~al~~~~Gl~~i~lSl~-yR~Pi~~AWStPGaAlL~~~~~~ 84 (378)
T PF03594_consen 6 SAVSAGFVAVLVGYTGPVAIVLQAAQAAGASPAQIASWLFALYLGMGLTSILLSLR-YRMPIVTAWSTPGAALLATSLPG 84 (378)
T ss_pred HHHHHHHHHHHhhccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCchhhcchHHHHHHHHhccC
Confidence 46677777777777776665555566789999999988889999999999999997 89999876554 2221
Q ss_pred -HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhCCceehhhhhhhhhhhhhcccccccchhhhhHHHHHHHHHHHHHHHH
Q 048106 260 -IMKELQGAIIIGSVFQAFLGYSGLMSLLLRLINPVVVAPTIAAVGLSFYSYGFPLVGTCLEIGVVQILLVILFSLYLRK 338 (694)
Q Consensus 260 -~~~~~~GaiivaGl~~ilLg~tgl~~~L~r~fpPvV~g~vV~lIGlsL~~~g~~~~g~~~~ig~~~~ll~i~~sl~l~~ 338 (694)
.+.++.|+.+++|++.+++|.+|+++|+.|.+|+-+....+++|-+.+....++.... .+.. ....+..|+
T Consensus 85 ~~~~eavGAfl~~~~Li~l~G~tg~~~rl~~~IP~~ia~AMLAGvLl~f~l~~f~a~~~-----~P~l-~~~ml~~~l-- 156 (378)
T PF03594_consen 85 YSFAEAVGAFLVAGALILLLGVTGLFGRLMRRIPPPIASAMLAGVLLPFGLAAFTALQA-----DPLL-VGPMLAVFL-- 156 (378)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHh-----HHHH-HHHHHHHHH--
Confidence 3789999999999999999999999999999999999888887765553322221111 1111 111222222
Q ss_pred HHhhhhhhHHHhhHHHHHHHHHHHHHHhhhhccCcCcccccCCCccccccccccccccccccccccCCccccCCCccccc
Q 048106 339 ISVIGHRIFLIYAVPLGLAITWAAAFLLTETGAYNYKECDVNVPVSNIISEHCRKHVSRMKQCRVDSSHALKSSPWFRFP 418 (694)
Q Consensus 339 i~~~g~~~~r~~aVLIGi~vG~iva~~lg~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~vD~s~~v~~apWf~lP 418 (694)
..|++.++|+++..+++|.++++..|.. +..+ + +| .++
T Consensus 157 ---~~~r~~pr~av~~al~~g~~~a~~~g~~----------------------------------~~~~-~---~~-~~~ 194 (378)
T PF03594_consen 157 ---LARRFSPRYAVLAALVAGVAVAALTGQL----------------------------------HPSA-L---QL-SLA 194 (378)
T ss_pred ---HHHHHcchhHHHHHHHHHHHHHHhcCCC----------------------------------Cccc-c---cc-ccc
Confidence 1367778899999999999998776532 2211 1 11 223
Q ss_pred cccccccccchHHHHHH-HHHHHHHHhhhcchhhhhhhhhccCCCCCCcccccccccchhHHHHHhhhcCCCCccccccc
Q 048106 419 YPLQWGTPVFHWKMAVV-MCVVSVIASVDSVGSYHASSLLVASRPPTPGVVSRAIGLEGLCSVLAGLWGTGTGSTTLTEN 497 (694)
Q Consensus 419 ~p~~~G~P~F~~~~il~-~l~v~lv~~vEsiG~~~A~~~~~~~~~~~~~~i~Rgi~adGl~silAGl~Gtg~p~TtyseN 497 (694)
.| .|-.|+||+..++. -+..+++.+..----=.++-+..+.+ ...++-+...|+++++++.||. . +-|
T Consensus 195 ~p-~~~~P~Fs~~a~v~lalPL~ivtmasQnlpG~aVL~a~GY~----~p~~~~~~~tGl~s~l~ApfGg-~-----~~n 263 (378)
T PF03594_consen 195 HP-VFTTPEFSWSALVSLALPLFIVTMASQNLPGIAVLRAAGYQ----PPVNPLITVTGLASLLAAPFGG-H-----AVN 263 (378)
T ss_pred ee-EEECCcccHHHHHHHHHHHHHHHHHhcchHHHHHHHHcCCC----CCchHHHHHHHHHHHHHhhhch-h-----hhH
Confidence 22 46779999987665 35566666542211112222222222 2356779999999999999994 4 345
Q ss_pred ceeeee----c----ccccce--ehhHHHHHHHHHHHHH-HHHHHHHhCChhhhhHHH-HHHHHHH
Q 048106 498 VHTIAV----T----KMGSRR--AVEIGAGILIVLSLIG-KVGGFIASIPQVMVAGLL-CFMWAML 551 (694)
Q Consensus 498 vGvIal----T----gvaSR~--v~~~aa~~LIllgf~P-K~~allasIP~pVlGG~l-ivlfg~i 551 (694)
.+-|.. . +-.+|| +...+|++.+++|++. .+.+++...|...+..+. +.+++.+
T Consensus 264 lAaitaAIc~g~eah~dp~rRy~Aav~~Gv~yll~Gl~a~~~v~l~~~lP~~li~~lAGLALlg~l 329 (378)
T PF03594_consen 264 LAAITAAICAGPEAHPDPSRRYIAAVAAGVFYLLFGLFAAALVALFAALPPALIAALAGLALLGTL 329 (378)
T ss_pred HHHHHHHHHcCCccCCCcccchHHHHHHhHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 444432 1 223444 7788888989998775 788999999998776543 3334444
No 12
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]
Probab=99.39 E-value=3e-11 Score=138.58 Aligned_cols=299 Identities=20% Similarity=0.270 Sum_probs=197.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHh--hcCCCcchhHHHHHHHHHHHHHHHHHHHHhccCcceEeccccchHH----
Q 048106 186 LVPIGLYGFQHYLSMLGSLILIPLVIVP--AMGGSHEDTSNVVSTVLFVSGVTTLLHTFFGSRLPLIQGSSFNFKH---- 259 (694)
Q Consensus 186 ~~~~illGlQH~LaM~~~~IvvPlIia~--a~Gl~~~~~~~lIsatl~vsGIaTllQ~~~G~rLPiv~GpSfafi~---- 259 (694)
+..-++.|+.-. ++++|.-++- +.|.+++ .-|..+-++.++-++||.+-=.+.||..++..
T Consensus 21 l~~Dl~AGltva------~valP~ama~a~~aGv~p~-------~GLyas~i~~~v~alfGgs~~~i~GPt~a~~~v~a~ 87 (554)
T COG0659 21 LRGDLLAGLTVA------AVALPLAMAFAIAAGVPPE-------AGLYASIVAGIIYALFGGSRGLISGPTGAFAVVLAA 87 (554)
T ss_pred hHHHHHHHHHHH------HHHhHHHHHHHHHcCCCHH-------HHHHHHHHHHHHHHHHcCCccceeccchhhHHHHHH
Confidence 345677777543 4566766653 4688764 66677778888999997766668999886532
Q ss_pred --------HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhCCceehhhhhhhhhhhhhcccccccch-------hh-h--
Q 048106 260 --------IMKELQGAIIIGSVFQAFLGYSGLMSLLLRLINPVVVAPTIAAVGLSFYSYGFPLVGTC-------LE-I-- 321 (694)
Q Consensus 260 --------~~~~~~GaiivaGl~~ilLg~tgl~~~L~r~fpPvV~g~vV~lIGlsL~~~g~~~~g~~-------~~-i-- 321 (694)
.++.+.-+.+++|++++++|.+++ +++.+++|..|+...+.+||+.++...++..-+. +. +
T Consensus 88 ~i~~~~~~g~~~~~~~tllaGv~~i~~G~lRL-G~li~fip~pVl~Gf~~Giai~I~~~Ql~~~~G~~~~~~~~~~~~~~ 166 (554)
T COG0659 88 VIASLVETGLALAFLATLLAGVFQILLGLLRL-GRLIRFIPRPVLIGFTAGIAILIILTQLPVLLGLASKVSGFWAKVSA 166 (554)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhhhccHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchHHHHHH
Confidence 233455678999999999999985 9999999999999999999999987655432110 00 0
Q ss_pred --------hHHHHHHHHHHHHH-HHHHHhhhhhhHHHhhHHHHHHHHHHHHHHhhhhccCcCcccccCCCcccccccccc
Q 048106 322 --------GVVQILLVILFSLY-LRKISVIGHRIFLIYAVPLGLAITWAAAFLLTETGAYNYKECDVNVPVSNIISEHCR 392 (694)
Q Consensus 322 --------g~~~~ll~i~~sl~-l~~i~~~g~~~~r~~aVLIGi~vG~iva~~lg~~g~~~~~~~~~~~p~~~~~~~~~~ 392 (694)
.....++ .++++. +..+.++. .|.-+.++++++++.+++.+.....
T Consensus 167 l~~~~~~~~~~~~~l-g~~~l~il~~~~~~~---~~~P~~liaiv~~t~i~~~~~~~~~--------------------- 221 (554)
T COG0659 167 LFTVLLTINLATLLL-GLLTLAILLFLPRLT---PRIPSPLIALVLGTLIVWIFPLDSL--------------------- 221 (554)
T ss_pred HHHhcccccHHHHHH-HHHHHHHHHHccchh---hhCCcHHHHHHHHHHHHHHhcCCch---------------------
Confidence 0111111 122221 11122222 2334468999999998888753110
Q ss_pred ccccccccccccCCccccCCCccccccccccccccchH----HHHHHHHHHHHHHhhhcchhhhhhhhhccCCCCCCccc
Q 048106 393 KHVSRMKQCRVDSSHALKSSPWFRFPYPLQWGTPVFHW----KMAVVMCVVSVIASVDSVGSYHASSLLVASRPPTPGVV 468 (694)
Q Consensus 393 ~~~~~~~~~~vD~s~~v~~apWf~lP~p~~~G~P~F~~----~~il~~l~v~lv~~vEsiG~~~A~~~~~~~~~~~~~~i 468 (694)
+. + -+..+.-...+|+.+ |.+++ ..+...+.++++..+||+-+..+.++..++ +.+-
T Consensus 222 ----~~--G-~i~~~lp~~~~~~~~--------P~~~~~~~~~l~~~al~la~lg~iesllta~~~~~~~~~----~~d~ 282 (554)
T COG0659 222 ----RY--G-EIPGSLPSGLPHFRL--------PNVSLSLLLALLPYALALALLGLLESLLTAVSFDGMTGT----KHDS 282 (554)
T ss_pred ----hc--c-cCcccCCcCCCcccC--------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----CCCC
Confidence 00 0 011111122344444 44444 345567899999999999999988876533 4456
Q ss_pred ccccccchhHHHHHhhhcCCCCcc-cccccceeeeecccccceehhHHHHHHHHHHHHHHHHHHHHhCChhhhhHHHHH
Q 048106 469 SRAIGLEGLCSVLAGLWGTGTGST-TLTENVHTIAVTKMGSRRAVEIGAGILIVLSLIGKVGGFIASIPQVMVAGLLCF 546 (694)
Q Consensus 469 ~Rgi~adGl~silAGl~Gtg~p~T-tyseNvGvIalTgvaSR~v~~~aa~~LIllgf~PK~~allasIP~pVlGG~liv 546 (694)
||-+.+.|++++.+|+|| |.|.| +|++++--+. .|-.+|.+.++++++++++-++ ++.++..||.+++++++++
T Consensus 283 nrELiaqGiaNi~sglfg-g~p~~g~~srS~~nv~-sGarT~lsgi~~a~~lll~l~~--~~~~~~~IP~a~Laavli~ 357 (554)
T COG0659 283 NRELIAQGIANIASGLFG-GIPATGSISRSAINIK-SGARTRLSGIIHAALLLLLLLF--LAPLVSYIPLAALAAVLIL 357 (554)
T ss_pred CHHHHHhhHHHHHHHHhC-CccccchhHHHHHHHH-hCCcChHHHHHHHHHHHHHHHH--HHHHHHhCcHHHHHHHHHH
Confidence 889999999999999999 57777 5555554444 7778888888877776655433 4679999999999988764
No 13
>COG3135 BenE Uncharacterized protein involved in benzoate metabolism [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.38 E-value=1.1e-10 Score=124.46 Aligned_cols=294 Identities=23% Similarity=0.274 Sum_probs=200.4
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHHHhccCcceEecccc---chH-----
Q 048106 187 VPIGLYGFQHYLSMLGSLILIPLVIVPAMGGSHEDTSNVVSTVLFVSGVTTLLHTFFGSRLPLIQGSSF---NFK----- 258 (694)
Q Consensus 187 ~~~illGlQH~LaM~~~~IvvPlIia~a~Gl~~~~~~~lIsatl~vsGIaTllQ~~~G~rLPiv~GpSf---afi----- 258 (694)
.+++..|++-++.=+++.+++-+--+++.|.+++|++.-+.+..+..|+.|+.-++. .|.|++.+=|- +.+
T Consensus 20 p~~l~ag~va~~vG~~~s~aii~~aa~a~gas~aq~aSwl~al~l~mGv~ti~Ls~~-yR~Pv~~aWSTPG~all~asl~ 98 (402)
T COG3135 20 PQTLLAGFVAVLVGYASSLAIIIQAAQAAGASPAQIASWLTALGLAMGVSTLTLSLR-YRVPVLTAWSTPGAALLVASLG 98 (402)
T ss_pred chhhhhhhHHheeccCccHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhh-hccceeeeecCccHHHHHhccC
Confidence 458899999999988887766665566789999999999999999999999999997 89999886554 111
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhCCceehhhhhhhhhhhhhcccccccchhhhhHHHHHHHHHHHHHHH
Q 048106 259 -HIMKELQGAIIIGSVFQAFLGYSGLMSLLLRLINPVVVAPTIAAVGLSFYSYGFPLVGTCLEIGVVQILLVILFSLYLR 337 (694)
Q Consensus 259 -~~~~~~~GaiivaGl~~ilLg~tgl~~~L~r~fpPvV~g~vV~lIGlsL~~~g~~~~g~~~~ig~~~~ll~i~~sl~l~ 337 (694)
..+.++.|+.+++|++.++.|.++.+.++.+.+||.+....+.+|=+.+..-+++-..+. +...+- ++..|+.
T Consensus 99 g~s~~eaVGAfiVt~~li~l~G~~~~l~rl~~~IP~sla~AmlAGILL~F~l~a~~a~~~~-----p~l~lp-mv~~~ll 172 (402)
T COG3135 99 GLSFAEAVGAFIVTGALIILCGLTGPLTRLMRIIPPSLAAAMLAGILLRFGLKAFKALPTQ-----PLLVLP-MVLAYLL 172 (402)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhccCCC-----hHHHHH-HHHHHHH
Confidence 136899999999999999999999999999999999888777666444433333322221 111111 1122221
Q ss_pred HHHhhhhhhHHHhhHHHHHHHHHHHHHHhhhhccCcCcccccCCCccccccccccccccccccccccCCccccCCCcccc
Q 048106 338 KISVIGHRIFLIYAVPLGLAITWAAAFLLTETGAYNYKECDVNVPVSNIISEHCRKHVSRMKQCRVDSSHALKSSPWFRF 417 (694)
Q Consensus 338 ~i~~~g~~~~r~~aVLIGi~vG~iva~~lg~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~vD~s~~v~~apWf~l 417 (694)
+ |.+-.+|+|+..+++|..++.+.|.... .|. ..-...
T Consensus 173 -~----r~f~pr~aV~aalvvgv~va~~~G~~~~-------------------------------~~~------~~~~~~ 210 (402)
T COG3135 173 -A----RVFAPRYAVIAALVVGVLVAALLGDLHT-------------------------------ALV------ALEIST 210 (402)
T ss_pred -H----HHcCchHHHHHHHHHHHHHHHHhCcccc-------------------------------ccc------ccccCc
Confidence 1 3444569999999999999998863210 111 111222
Q ss_pred ccccccccccchHHHHHH-HHHHHHHHhhhcchhhhhhhhhccCCCCCCcccccccccchhHHHHHhhhcCCCCcccccc
Q 048106 418 PYPLQWGTPVFHWKMAVV-MCVVSVIASVDSVGSYHASSLLVASRPPTPGVVSRAIGLEGLCSVLAGLWGTGTGSTTLTE 496 (694)
Q Consensus 418 P~p~~~G~P~F~~~~il~-~l~v~lv~~vEsiG~~~A~~~~~~~~~~~~~~i~Rgi~adGl~silAGl~Gtg~p~Ttyse 496 (694)
| .|-.|+|++.+++. .+..+++.|..--..=.|+=+..+.+ ++ .+--+.+.|+.+++++.||. |+-
T Consensus 211 p---~~v~P~Fs~~A~l~lalPL~lvtmasQN~pGiAvLka~gY~-pp---~~pl~~~TGl~sll~ApfG~------~t~ 277 (402)
T COG3135 211 P---TWVTPEFSFAAMLSLALPLFLVTMASQNLPGIAVLKAAGYQ-PP---PSPLIVATGLASLLSAPFGG------HTV 277 (402)
T ss_pred c---eeeCCcccHHHHHHHhHHHHHHHHHhccCccceeehhcCCC-CC---CchHHHHhHHHHHHhccccc------cee
Confidence 3 56779999987765 45667766653222222222222222 22 23357889999999999994 344
Q ss_pred cceeeeeccc---------ccce-ehhHHHHHHHHHHHHH-HHHHHHHhCChhhhhH
Q 048106 497 NVHTIAVTKM---------GSRR-AVEIGAGILIVLSLIG-KVGGFIASIPQVMVAG 542 (694)
Q Consensus 497 NvGvIalTgv---------aSR~-v~~~aa~~LIllgf~P-K~~allasIP~pVlGG 542 (694)
|.+-|..-=| ..|| +...++++-+++|+|. .+.+++...|.+.+..
T Consensus 278 nLaAItAAic~gpdaHpD~~rry~Aa~~agi~ylv~GlF~~~~~~l~~alP~~li~~ 334 (402)
T COG3135 278 NLAAITAAICTGPDAHPDPARRYTAALVAGIFYLLAGLFGGALVGLMAALPASLIAA 334 (402)
T ss_pred cHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcHHHHHH
Confidence 5555443222 2334 7888888999998875 7899999999886654
No 14
>PRK11660 putative transporter; Provisional
Probab=99.35 E-value=3.3e-11 Score=138.96 Aligned_cols=321 Identities=16% Similarity=0.175 Sum_probs=185.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHhh--cCCCcchhHHHHHHHHHHHHHHHHHHHHhccCcceEeccccchHHH---
Q 048106 186 LVPIGLYGFQHYLSMLGSLILIPLVIVPA--MGGSHEDTSNVVSTVLFVSGVTTLLHTFFGSRLPLIQGSSFNFKHI--- 260 (694)
Q Consensus 186 ~~~~illGlQH~LaM~~~~IvvPlIia~a--~Gl~~~~~~~lIsatl~vsGIaTllQ~~~G~rLPiv~GpSfafi~~--- 260 (694)
+..-++.|+.-. ++.+|.-++-+ .|+++. .-|..+-+.+++-++||+.--++.||.-.....
T Consensus 29 l~~D~iAGltv~------~~~iPq~mayA~lag~pp~-------~GLysa~~~~~vyal~Gss~~~~~Gp~a~~~~~~~~ 95 (568)
T PRK11660 29 FTRDLIAGITVG------IIAIPLAMALAIASGVPPQ-------YGLYTAAVAGIVIALTGGSRFSVSGPTAAFVVILYP 95 (568)
T ss_pred hhHHHHHHHHHH------HHHHHHHHHHHHHcCCChH-------HHHHHHHHHHHHHHHhcCCCCcccChhHHHHHHHHH
Confidence 445677777654 34556555543 577764 357778889999999988777889998743211
Q ss_pred ------HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhCCceehhhhhhhhhhhhhcccccc-cchh--------------
Q 048106 261 ------MKELQGAIIIGSVFQAFLGYSGLMSLLLRLINPVVVAPTIAAVGLSFYSYGFPLV-GTCL-------------- 319 (694)
Q Consensus 261 ------~~~~~GaiivaGl~~ilLg~tgl~~~L~r~fpPvV~g~vV~lIGlsL~~~g~~~~-g~~~-------------- 319 (694)
+..+..+.+++|++++++|++++ +++.+++|..|+...+.++|+.++...++.. |-..
T Consensus 96 ~~~~~~~~~~~~~~~l~Gii~~l~gllrl-G~l~~fip~pVi~Gf~~g~al~I~~~Ql~~~lG~~~~~~~~~~~~~l~~~ 174 (568)
T PRK11660 96 VSQQFGLAGLLVATLMSGIILILMGLARL-GRLIEYIPLSVTLGFTSGIGIVIATLQIKDFFGLQMAHVPEHYLEKVGAL 174 (568)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHhh-hHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccHHHHHHHH
Confidence 23344568899999999999985 7899999999999999999998876554333 1100
Q ss_pred --hhh---HHHHHHHHHHHHHHHHHHhhhhhhHHHhhHHHHHHHHHHHHHHhhhhccCcCcccccCCCcccccccccccc
Q 048106 320 --EIG---VVQILLVILFSLYLRKISVIGHRIFLIYAVPLGLAITWAAAFLLTETGAYNYKECDVNVPVSNIISEHCRKH 394 (694)
Q Consensus 320 --~ig---~~~~ll~i~~sl~l~~i~~~g~~~~r~~aVLIGi~vG~iva~~lg~~g~~~~~~~~~~~p~~~~~~~~~~~~ 394 (694)
.++ .+..++.++..+++..+.++.++ .-.-++.++++.++++.++..+. +.+. +.+.....
T Consensus 175 ~~~l~~~~~~~~~~~~~~l~lll~~~~~~~~---iP~~li~iiv~t~~~~~~~~~~~-~v~~----------vg~~~~~~ 240 (568)
T PRK11660 175 FQALPTINWGDALIGIVTLGVLILWPRLKIR---LPGHLPALLAGTAVMGVLNLLGG-HVAT----------IGSRFHYV 240 (568)
T ss_pred HHhhccCCHHHHHHHHHHHHHHHHHHhhccc---CchHHHHHHHHHHHHHHHhccCC-Ccee----------eccccccc
Confidence 000 11111111111111222222232 23346777777777776653210 0000 00000000
Q ss_pred ccccccccccCCccccCCCccccccc-ccc-cc-ccchHHH----HHHHHHHHHHHhhhcchhhhhhhhhccCCCCCCcc
Q 048106 395 VSRMKQCRVDSSHALKSSPWFRFPYP-LQW-GT-PVFHWKM----AVVMCVVSVIASVDSVGSYHASSLLVASRPPTPGV 467 (694)
Q Consensus 395 ~~~~~~~~vD~s~~v~~apWf~lP~p-~~~-G~-P~F~~~~----il~~l~v~lv~~vEsiG~~~A~~~~~~~~~~~~~~ 467 (694)
... ........+ ..|-+.+|.. ..+ |. -.++|.. +...+.+.++..+|++-...+.++..+ ++.+
T Consensus 241 ~~~-g~~~~~ip~---~~p~~~~p~~~~~~~~~~~~~~~~~~~~ll~~a~~iaiv~~iesl~~~~~~~~~~~----~~~d 312 (568)
T PRK11660 241 LAD-GSQGNGIPP---LLPQFVLPWNLPGADGQPFTLSWDLIRALLPAAFSMAMLGAIESLLCAVVLDGMTG----TKHS 312 (568)
T ss_pred ccc-cccccCCCC---CCCCCCCCccccccccccCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCC
Confidence 000 000000000 0111222210 000 00 0235443 444667788888998866666555432 2345
Q ss_pred cccccccchhHHHHHhhhcCCCCcccccccceeeeecccccceehhHHHHHHH-H-HHHHHHHHHHHHhCChhhhhHHHH
Q 048106 468 VSRAIGLEGLCSVLAGLWGTGTGSTTLTENVHTIAVTKMGSRRAVEIGAGILI-V-LSLIGKVGGFIASIPQVMVAGLLC 545 (694)
Q Consensus 468 i~Rgi~adGl~silAGl~Gtg~p~TtyseNvGvIalTgvaSR~v~~~aa~~LI-l-lgf~PK~~allasIP~pVlGG~li 545 (694)
.||-+.++|++++++|+||+ +|.+++..-..+-..+|..+|.+.++.+++++ . +.+.| ++..||.+|++++++
T Consensus 313 ~n~EL~a~G~aNi~~~~fgg-~p~~~s~srSa~n~~aGarT~la~iv~a~~~ll~ll~l~~----ll~~iP~~vLa~ili 387 (568)
T PRK11660 313 ANSELVGQGLGNIVAPFFGG-ITATAAIARSAANVRAGATSPISAVIHALLVLLALLVLAP----LLSYLPLSAMAALLL 387 (568)
T ss_pred CcHHHHHHhHHHHHHHHhCc-ccccchHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHH----HHHhCcHHHHHHHHH
Confidence 79999999999999999995 88887733334444567777777776665543 3 34444 899999999999987
Q ss_pred HH
Q 048106 546 FM 547 (694)
Q Consensus 546 vl 547 (694)
+.
T Consensus 388 ~~ 389 (568)
T PRK11660 388 MV 389 (568)
T ss_pred HH
Confidence 64
No 15
>TIGR00815 sulP high affinity sulphate transporter 1. (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
Probab=99.32 E-value=9.7e-11 Score=134.94 Aligned_cols=304 Identities=14% Similarity=0.186 Sum_probs=190.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHhh--cCCCcchhHHHHHHHHHHHHHHHHHHHHhccCcceEeccccchHH----
Q 048106 186 LVPIGLYGFQHYLSMLGSLILIPLVIVPA--MGGSHEDTSNVVSTVLFVSGVTTLLHTFFGSRLPLIQGSSFNFKH---- 259 (694)
Q Consensus 186 ~~~~illGlQH~LaM~~~~IvvPlIia~a--~Gl~~~~~~~lIsatl~vsGIaTllQ~~~G~rLPiv~GpSfafi~---- 259 (694)
+..-++.|+.-. ++.+|.-++-+ .|+++. .-+..+.+..++-++||+.-=++.||.-+...
T Consensus 14 l~~Di~aGltv~------~~~iP~~~ayA~laglpp~-------~GLysa~~~~iv~alfGss~~~i~Gp~a~~sl~~~~ 80 (563)
T TIGR00815 14 FKGDLMAGLTVG------ILLIPQAMAYAILAGLSPI-------YGLYTSFVPPFIYALFGTSRDIAIGPVAVMSLLLGS 80 (563)
T ss_pred hhhHHHHHHHHH------HHHHHHHHHHHHHcCCCch-------hhhHHHHHHHHHhheecCCCcccCCHHHHHHHHHHH
Confidence 345677777644 44556655543 578764 45677788888888998877777888763211
Q ss_pred --------------HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhCCceehhhhhhhhhhhhhcccccccc--------
Q 048106 260 --------------IMKELQGAIIIGSVFQAFLGYSGLMSLLLRLINPVVVAPTIAAVGLSFYSYGFPLVGT-------- 317 (694)
Q Consensus 260 --------------~~~~~~GaiivaGl~~ilLg~tgl~~~L~r~fpPvV~g~vV~lIGlsL~~~g~~~~g~-------- 317 (694)
.+..+....+++|++++++|++++ +++.+++|..|+...+.++|+.++...++.+-+
T Consensus 81 ~v~~~~~~~~~~~~~~~~a~~l~~l~Gi~~~~~g~lrl-G~l~~~is~~Vi~Gf~~g~a~~i~~~Ql~~~~G~~~~~~~~ 159 (563)
T TIGR00815 81 VIARVGLQYLFDCDAIRLAFTLTLLAGIFQVILGLLRL-GFLIEFLSHAVISGFMTGAAITIGLSQLKGLLGISIFNTRT 159 (563)
T ss_pred HHHHhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 112233667899999999999985 899999999999999999999998443332210
Q ss_pred -hh--------hhh------HHHHHHHHHHHHHHHHHHhhhhhh-----HHHhhHHHHHHHHHHHHHHhhhhccCcCccc
Q 048106 318 -CL--------EIG------VVQILLVILFSLYLRKISVIGHRI-----FLIYAVPLGLAITWAAAFLLTETGAYNYKEC 377 (694)
Q Consensus 318 -~~--------~ig------~~~~ll~i~~sl~l~~i~~~g~~~-----~r~~aVLIGi~vG~iva~~lg~~g~~~~~~~ 377 (694)
.. .++ .+...+.++..+.+..+.++.+++ ...-..++.+++++++.+.+.... + +
T Consensus 160 ~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~p~~li~vi~~~~~~~~~~~~~---~-~- 234 (563)
T TIGR00815 160 DTLGVVISTWAGLPNTHNWNWCTLVIGLVLLLFLLYTKKLGKRNKKLLFAPAVAPLLVVILATLAVTIGLHKK---Q-G- 234 (563)
T ss_pred ChHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHhhhhccchhcccccHHHHHHHHHHHHHHHHccCC---C-C-
Confidence 00 011 111111111111111122222221 111245666666666655442100 0 0
Q ss_pred ccCCCccccccccccccccccccccccCCccccCCCccccccccccccccchHHH----HHHHHHHHHHHhhhcchhhhh
Q 048106 378 DVNVPVSNIISEHCRKHVSRMKQCRVDSSHALKSSPWFRFPYPLQWGTPVFHWKM----AVVMCVVSVIASVDSVGSYHA 453 (694)
Q Consensus 378 ~~~~p~~~~~~~~~~~~~~~~~~~~vD~s~~v~~apWf~lP~p~~~G~P~F~~~~----il~~l~v~lv~~vEsiG~~~A 453 (694)
+.. +.+-| -.+| .+..|.+||.. +...+.+++++.+|++....+
T Consensus 235 -------------------------~~~---~g~ip-~g~p---~~~~~~~~~~~~~~l~~~a~~ia~v~~~e~l~~a~~ 282 (563)
T TIGR00815 235 -------------------------VSI---LGHIP-SGLS---FFPPITLDWELLPTLAPDAIAIAIVGLIESIAIARS 282 (563)
T ss_pred -------------------------eEE---EeecC-CCCC---CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 11111 0112 23344555543 444688999999999998888
Q ss_pred hhhhccCCCCCCcccccccccchhHHHHHhhhcCCCCcccccccceeeeecccccceehhHHHHHHHHHHHHHHHHHHHH
Q 048106 454 SSLLVASRPPTPGVVSRAIGLEGLCSVLAGLWGTGTGSTTLTENVHTIAVTKMGSRRAVEIGAGILIVLSLIGKVGGFIA 533 (694)
Q Consensus 454 ~~~~~~~~~~~~~~i~Rgi~adGl~silAGl~Gtg~p~TtyseNvGvIalTgvaSR~v~~~aa~~LIllgf~PK~~alla 533 (694)
.++..+ .+-+.+|-+.+.|++++++|+||+ +|.+.......+-..+|..+|.+..+++++++++.++ ++.++.
T Consensus 283 ~~~~~~----~~~d~n~El~a~G~~N~~~~~fg~-~p~~~s~srs~~~~~~G~~t~~a~i~~~~~~l~~~l~--~~~~l~ 355 (563)
T TIGR00815 283 FARMTG----YKIDANQELVAQGIANIVGSFFSC-YPATGSLSRTAVNAKAGCRTQLSGVVTAIVVLLVLLV--LTPLFY 355 (563)
T ss_pred HHHHhC----CCCCCcHHHHHhhHHHHHHHHhCc-cCCCCcchHHHHHHhcCCcchHHHHHHHHHHHHHHHH--HHHHHH
Confidence 876532 234468899999999999999994 8888554445555668999999999988887776555 567999
Q ss_pred hCChhhhhHHHHHH
Q 048106 534 SIPQVMVAGLLCFM 547 (694)
Q Consensus 534 sIP~pVlGG~livl 547 (694)
.||.+++++++++.
T Consensus 356 ~iP~~~la~ili~~ 369 (563)
T TIGR00815 356 YIPQAALAAIIISA 369 (563)
T ss_pred hChHHHHHHHHHHH
Confidence 99999999998863
No 16
>PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related. These proteins are: Neurospora crassa sulphate permease II (gene cys-14). Yeast sulphate permeases (genes SUL1 and SUL2). Rat sulphate anion transporter 1 (SAT-1). Mammalian DTDST, a probable sulphate transporter which, in human, is involved in the genetic disease, diastrophic dysplasia (DTD). Sulphate transporters 1, 2 and 3 from the legume Stylosanthes hamata. Human pendrin (gene PDS), which is involved in a number of hearing loss genetic diseases. Human protein DRA (Down-Regulated in Adenoma). Soybean early nodulin 70. Escherichia coli hypothetical protein ychM. Caenorhabditis elegans hypothetical protein F41D9.5. These proteins are highly hydrophobic and seem to contain about 12 transmembrane domains.; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.60 E-value=5.2e-08 Score=102.09 Aligned_cols=109 Identities=15% Similarity=0.200 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHhhhcchhhhhhhhhccCCCCCCcccccccccchhHHHHHhhhcCCCCcccccccceeeeeccccccee
Q 048106 432 MAVVMCVVSVIASVDSVGSYHASSLLVASRPPTPGVVSRAIGLEGLCSVLAGLWGTGTGSTTLTENVHTIAVTKMGSRRA 511 (694)
Q Consensus 432 ~il~~l~v~lv~~vEsiG~~~A~~~~~~~~~~~~~~i~Rgi~adGl~silAGl~Gtg~p~TtyseNvGvIalTgvaSR~v 511 (694)
.+...+.+.+++.+|++.+..+.++..+ .+-+.||-+.+.|++++++|+|| |+|.+..-....+-...|..+|.+
T Consensus 149 ~~~~a~~ia~v~~~~s~~~~~~~~~~~~----~~~d~n~El~a~G~aNi~s~~~g-g~p~~~s~srs~~~~~~Ga~t~~s 223 (280)
T PF00916_consen 149 LLPTALAIAIVGFIESLLIAKSIAKKTG----YRIDPNQELIALGLANIVSGLFG-GMPGSGSFSRSAVNYRAGARTRLS 223 (280)
T ss_pred cchhHHHHHHHHHHHHHHhhhhhccccc----ccCCcHHHHHHhhhccccchhhc-ccccccccccchHHHhcCcceeeh
Confidence 3445678889999999988887766432 23357899999999999999999 587776555555555678888888
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhCChhhhhHHHHHH
Q 048106 512 VEIGAGILIVLSLIGKVGGFIASIPQVMVAGLLCFM 547 (694)
Q Consensus 512 ~~~aa~~LIllgf~PK~~allasIP~pVlGG~livl 547 (694)
..+++++++++-++ ++.++.-||.++++|++++.
T Consensus 224 ~~~~~~~~l~~l~~--~~~~l~~iP~~~La~ili~~ 257 (280)
T PF00916_consen 224 GLISALFVLLVLLF--LAPLLAYIPKAVLAAILIVV 257 (280)
T ss_pred hHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHH
Confidence 88887776554322 23599999999999988763
No 17
>TIGR00834 ae anion exchange protein. They preferentially catalyze anion exchange (antiport) reactions, typically acting as HCO3-:Cl- antiporters, but also transporting a range of other inorganic and organic anions. Additionally, renal Na+:HCO3- cotransporters have been found to be members of the AE family. They catalyze the reabsorption of HCO3- in the renal proximal tubule.
Probab=98.41 E-value=0.00011 Score=88.36 Aligned_cols=300 Identities=18% Similarity=0.257 Sum_probs=155.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCcceEeccccc---hHHHHH------------HHHHHHHHHHHHHHHHHhhhHHHHHH
Q 048106 224 NVVSTVLFVSGVTTLLHTFFGSRLPLIQGSSFN---FKHIMK------------ELQGAIIIGSVFQAFLGYSGLMSLLL 288 (694)
Q Consensus 224 ~lIsatl~vsGIaTllQ~~~G~rLPiv~GpSfa---fi~~~~------------~~~GaiivaGl~~ilLg~tgl~~~L~ 288 (694)
+=++=+++.++++.++.++||..=.+++|++.- |...+. -..-.-+.++++.++++.+.. ..+.
T Consensus 401 ~gv~E~Llstai~Giifslf~GQPL~IlG~TGPilvF~~~ly~~c~~~~~~yl~~~~WigiW~~~~~~lla~~~~-s~lv 479 (900)
T TIGR00834 401 MGVSELLISTAVQGVLFALLAAQPLLVVGFSGPLLVFEEAFFSFCESNGLEYLVGRVWIGLWLVLLVLLLVATEG-SFLV 479 (900)
T ss_pred chHHHHHHHHHHHHHHHhhhcCCceEEecCcccHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhH-HHHH
Confidence 346778899999999999997777778888883 222111 111123567777777777764 5666
Q ss_pred HHhCCceehhhhhhhhhhhhhccccccc---------------c------------------------------h---hh
Q 048106 289 RLINPVVVAPTIAAVGLSFYSYGFPLVG---------------T------------------------------C---LE 320 (694)
Q Consensus 289 r~fpPvV~g~vV~lIGlsL~~~g~~~~g---------------~------------------------------~---~~ 320 (694)
|+++...--..-++|.+..+.-+++..- . | .+
T Consensus 480 ryiTRFTeEiFa~lIs~IFI~eai~~L~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~ 559 (900)
T TIGR00834 480 RYISRFTQEIFSFLISLIFIYETFSKLIKIFQEHPLQVFYNTLFCVPPKPQGPSVSALLEKDCSKLGGTLGGNNCRFQPN 559 (900)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccccccccccccccccccccccccccccccccccccch
Confidence 7766655444555555554443332110 0 1 11
Q ss_pred hhHHHHHHHH---HHHHHHHHHH------hhhhhhHHHhhHHHHHHHHHHHHHHhhhhccCcCcccccCCCccccccccc
Q 048106 321 IGVVQILLVI---LFSLYLRKIS------VIGHRIFLIYAVPLGLAITWAAAFLLTETGAYNYKECDVNVPVSNIISEHC 391 (694)
Q Consensus 321 ig~~~~ll~i---~~sl~l~~i~------~~g~~~~r~~aVLIGi~vG~iva~~lg~~g~~~~~~~~~~~p~~~~~~~~~ 391 (694)
.+....++.+ .+..+++.+. .+-++++.=|+++|++++-..+.+.++.+. ..+ ..+|.
T Consensus 560 ~~llsliL~lgTf~~a~~L~~fk~s~yf~~~vR~~isDfgv~iaI~~~t~v~~~~~~v~--~~k---l~Vp~-------- 626 (900)
T TIGR00834 560 TALLSLVLMLGTFFLAMFLRKFKNSRYFPGKARRLIGDFGVPISILIMVLVDIFIGDTY--TQK---LSVPS-------- 626 (900)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCcCCchhhhhhhhhhHHHHHHHHHHHHHHhccCc--ccc---cCCCC--------
Confidence 1111111111 1122233331 123556677899999999888877654211 000 11111
Q ss_pred cccccccccccccCCcc-ccCCCccccccccccccccch-HHHHHHHHHHHHHHhhhcchhhhhhhhhccCCCCCCcccc
Q 048106 392 RKHVSRMKQCRVDSSHA-LKSSPWFRFPYPLQWGTPVFH-WKMAVVMCVVSVIASVDSVGSYHASSLLVASRPPTPGVVS 469 (694)
Q Consensus 392 ~~~~~~~~~~~vD~s~~-v~~apWf~lP~p~~~G~P~F~-~~~il~~l~v~lv~~vEsiG~~~A~~~~~~~~~~~~~~i~ 469 (694)
.+.+. -..-.|+--|.-.....|.+. +.++++.+++++.-.+|+= .++.++ .++ +.+++
T Consensus 627 ------------~f~pt~p~~R~W~i~p~~~~~~~p~w~~~~A~iPAlll~ILiFmD~n----Its~iv-~~~--e~kLk 687 (900)
T TIGR00834 627 ------------GLKVTNPSARGWFIPPLGENRPFPWWMMFAAALPALLVFILIFMEQQ----ITTLIV-SKK--ERKLK 687 (900)
T ss_pred ------------CcCCCCCCCCCeEEccccccccccHHHHHHHHHHHHHHHHHHHHHhh----hHHHHh-cCc--cccCC
Confidence 01110 011457643321111113332 4566777777777777742 122222 121 22233
Q ss_pred c------ccccchhHHHHHhhhcCCCCc--------------ccccccc--ee-eeecccccceehhHHHHHHHHHHHHH
Q 048106 470 R------AIGLEGLCSVLAGLWGTGTGS--------------TTLTENV--HT-IAVTKMGSRRAVEIGAGILIVLSLIG 526 (694)
Q Consensus 470 R------gi~adGl~silAGl~Gtg~p~--------------TtyseNv--Gv-IalTgvaSR~v~~~aa~~LIllgf~P 526 (694)
+ -++.-|+.+.++|++|- ..+ +.++++. |- -...+|..-|+--+...+|+.++++
T Consensus 688 KgsgyH~Dllllg~~~~v~sllGL-Pw~~aatv~S~~Hv~sL~v~~~~~~~Ge~~~i~~V~EQRvT~ll~~lLiglsv~- 765 (900)
T TIGR00834 688 KGSGFHLDLLLVVGMGGVAALFGL-PWLSAATVRSVTHANALTVMSKASAPGEKAQIQEVREQRVTGLLVAVLVGLSIL- 765 (900)
T ss_pred CCcccchHHHHHHHHHHHHHhcCC-CcccccCCcChhhHhHHeeeeeccCCCCCCccceeEeeehHHHHHHHHHHHHHH-
Confidence 3 46678999999999984 322 2222221 00 0122344444333333344433322
Q ss_pred HHHHHHHhCChhhhhHHHHHHHHHHHHhhccccc
Q 048106 527 KVGGFIASIPQVMVAGLLCFMWAMLAALGLSNLR 560 (694)
Q Consensus 527 K~~allasIP~pVlGG~livlfg~i~~sGl~~L~ 560 (694)
+.-++..||.+|+.|+++|| |.-...|.+..+
T Consensus 766 -~~PvL~~IP~aVL~GvFlYM-Gv~SL~GnQ~~~ 797 (900)
T TIGR00834 766 -MEPILKRIPLAVLFGIFLYM-GVTSLSGIQLFD 797 (900)
T ss_pred -HHHHHhhccHHHHHHHHHHH-HHhhcccCHHHH
Confidence 34499999999999999985 666666665444
No 18
>KOG1172 consensus Na+-independent Cl/HCO3 exchanger AE1 and related transporters (SLC4 family) [Inorganic ion transport and metabolism]
Probab=98.05 E-value=0.00032 Score=83.10 Aligned_cols=327 Identities=15% Similarity=0.189 Sum_probs=164.2
Q ss_pred HHHHHHHHHHHhHHHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHHHhccCcceEeccccchH---HHH---------
Q 048106 194 FQHYLSMLGSLILIPLVIVPAMGGSHEDTSNVVSTVLFVSGVTTLLHTFFGSRLPLIQGSSFNFK---HIM--------- 261 (694)
Q Consensus 194 lQH~LaM~~~~IvvPlIia~a~Gl~~~~~~~lIsatl~vsGIaTllQ~~~G~rLPiv~GpSfafi---~~~--------- 261 (694)
|--.+.|+.+++++-+-.+..++=.. +-..-++-+++.+.++.++.++||..=.+++|++.-.. ..+
T Consensus 363 la~~lfiYfa~l~P~ItFG~ll~~~T-dg~~~v~E~L~stal~GiifslfggQPLlIlg~TgP~lVfe~~lf~f~~~~~~ 441 (876)
T KOG1172|consen 363 LAATLFIYFACLLPAITFGGLLGEAT-DGLIGVVETLLSTALCGIIFSLFGGQPLLILGVTGPLLVFEKALFKFCKDNGL 441 (876)
T ss_pred chHHHHHHHHhhhhHhhHHHHhhhhc-cchHHHHHHHHHHHHHHHHHHHhcCCceEEEecCccHHHHHHHHHHHHhhCCC
Confidence 34455566666666555555443222 33456778999999999999999888888999988321 111
Q ss_pred ---HHHHHHHHHHHHHHHHHHhhhHHHHHHHHhCCceehhhhhhhhhhhhhccccc-----------c------------
Q 048106 262 ---KELQGAIIIGSVFQAFLGYSGLMSLLLRLINPVVVAPTIAAVGLSFYSYGFPL-----------V------------ 315 (694)
Q Consensus 262 ---~~~~GaiivaGl~~ilLg~tgl~~~L~r~fpPvV~g~vV~lIGlsL~~~g~~~-----------~------------ 315 (694)
.-..--.+.+.++.++++.+.. ..+.++|+...-=..-++|-+-.+.-+++. .
T Consensus 442 dyl~~r~wVglW~~~l~illaa~~a-s~lv~~~TRfteEiF~~LIs~iFi~eai~kl~~i~~~~~~~~~~~~~~~~~~~~ 520 (876)
T KOG1172|consen 442 DYLAFRAWVGLWTAFLLILLAATNA-SSLVKYITRFTEEIFGLLISLIFIYEAIKKLIKIFKGLPIEFDSKPNPGADWSG 520 (876)
T ss_pred chhhHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccCCccccccc
Confidence 1111122556666777776653 555555554332233334433333333320 0
Q ss_pred cch-------------hhhhHHHHHH---HHHHHHHHHHHH--hh----hhhhHHHhhHHHHHHHHHHHHHHhhhhccCc
Q 048106 316 GTC-------------LEIGVVQILL---VILFSLYLRKIS--VI----GHRIFLIYAVPLGLAITWAAAFLLTETGAYN 373 (694)
Q Consensus 316 g~~-------------~~ig~~~~ll---~i~~sl~l~~i~--~~----g~~~~r~~aVLIGi~vG~iva~~lg~~g~~~ 373 (694)
-.| .+.++..+++ .+.++++++.+. .| -+.++.=|++++.+++-..+.+..+.. +.
T Consensus 521 ~~~~~~~~~~~~~~~~p~~~llslil~~gt~~~a~~lr~fr~s~yf~~~~R~~isDfgvpisIl~~s~i~~~~~~~--~~ 598 (876)
T KOG1172|consen 521 PECESVSGTLLGSSCRPDTALLSLILMFGTLFLALTLRKFKSSRYFPRKVRSLISDFGVPLSILVFSLIDYFGGSV--ET 598 (876)
T ss_pred ccccccCcccCCCcCCcchHHHHHHHHHHHHHHHHHHHHhccCCccchHHHHHHHhhhhHHHHHHHHHHHhhcccc--CC
Confidence 011 1122222211 112233344432 22 345566689999999988888776421 11
Q ss_pred CcccccCCCccccccccccccccccccccccCCccccC-CCcccccc-ccccccccchHHHHHHHHHHHHHHhhhcchhh
Q 048106 374 YKECDVNVPVSNIISEHCRKHVSRMKQCRVDSSHALKS-SPWFRFPY-PLQWGTPVFHWKMAVVMCVVSVIASVDSVGSY 451 (694)
Q Consensus 374 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~vD~s~~v~~-apWf~lP~-p~~~G~P~F~~~~il~~l~v~lv~~vEsiG~~ 451 (694)
.| ...| .-+...-.. ..|+..|. +.+|.. -..++++.+.+++.-.+|+-
T Consensus 599 ~k---l~vp--------------------~~~~~t~~~~rgw~v~~~~~~P~~~---~~~A~ipalll~iLiFmDqq--- 649 (876)
T KOG1172|consen 599 PK---LPVP--------------------SVFPPTWPFDRGWFVPPFGKNPWWY---VFAALIPALLLTILIFMDQQ--- 649 (876)
T ss_pred Cc---cccC--------------------cCCCCCCcccCCeeeCCCCCCCHHH---HHHHHHHHHHHHHHHHhcch---
Confidence 00 0011 111111111 36776552 222221 12455666667777777641
Q ss_pred hhhhhhccC--C-CCCCcccccccccchhHHHHHhhhcCCCCcc-cccccceeee----------------eccccccee
Q 048106 452 HASSLLVAS--R-PPTPGVVSRAIGLEGLCSVLAGLWGTGTGST-TLTENVHTIA----------------VTKMGSRRA 511 (694)
Q Consensus 452 ~A~~~~~~~--~-~~~~~~i~Rgi~adGl~silAGl~Gtg~p~T-tyseNvGvIa----------------lTgvaSR~v 511 (694)
-++.+++. + ..+.....=-++.-|+.++++|++|- ..+. ...++.-=+. .-+|..-|+
T Consensus 650 -Its~iv~rke~kLKKgsgyH~DLlllgil~~icsllGL-Pw~~~a~p~S~~H~~SL~v~~~~~apge~~~i~~V~EQRv 727 (876)
T KOG1172|consen 650 -ITAVIVNRKENKLKKGSGYHLDLLLLGILTLICSLLGL-PWSNAATVQSPMHTKSLAVESETSAPGEQPQIVGVREQRV 727 (876)
T ss_pred -HHHHHhhcccccCCCCcchhHHHHHHHHHHHHHHhcCC-CccccccccCHHHHHHHHHhhcccCCCCccccccchhhhh
Confidence 11222211 1 11222233357888999999999994 4332 3333321111 112333333
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhCChhhhhHHHHHHHHHHHHhhccc
Q 048106 512 VEIGAGILIVLSLIGKVGGFIASIPQVMVAGLLCFMWAMLAALGLSN 558 (694)
Q Consensus 512 ~~~aa~~LIllgf~PK~~allasIP~pVlGG~livlfg~i~~sGl~~ 558 (694)
--+-..+|+. ++--...++-.||.+|+.|+.+|| |.=...|.+.
T Consensus 728 tgll~~llvg--ls~~~~pvL~~IP~~VL~GvFlYM-gv~SL~Gnqf 771 (876)
T KOG1172|consen 728 TGLLQFLLVG--LSVLLLPVLKLIPMPVLYGVFLYM-GVSSLPGNQF 771 (876)
T ss_pred HHHHHHHHHH--HHHHHHHHHhhccHHHHHHHHHHH-hhccCCccHH
Confidence 3333333333 333344589999999999998874 4444444443
No 19
>KOG0236 consensus Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) [Inorganic ion transport and metabolism]
Probab=98.03 E-value=8.1e-05 Score=87.93 Aligned_cols=243 Identities=13% Similarity=0.183 Sum_probs=140.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHhCCceehhhhhhhhhhhhhcccccccc----------h------hh----h
Q 048106 262 KELQGAIIIGSVFQAFLGYSGLMSLLLRLINPVVVAPTIAAVGLSFYSYGFPLVGT----------C------LE----I 321 (694)
Q Consensus 262 ~~~~GaiivaGl~~ilLg~tgl~~~L~r~fpPvV~g~vV~lIGlsL~~~g~~~~g~----------~------~~----i 321 (694)
..+.-..+++|++|+++|++++ +++.++++..++...+.+.++.+....++..-+ + .. .
T Consensus 166 ~va~~lt~l~Giiq~~mG~lrL-Gfl~~~lS~~~l~GFt~gaa~~I~~sQlk~llGi~~~~~~~~~~~~~~~~~~~~~~~ 244 (665)
T KOG0236|consen 166 QVATTLTFLTGIIQLILGLLRL-GFLVRFLSEPALSGFTTGAALHIVTSQLKVLLGITSFPRHSGPGSIVFIVFDLLANL 244 (665)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-ChHHHHccHHHHhHhhhhhhhhhhHHhhHhhccccccCCCCCceeEEEeeHHhhhcc
Confidence 3445567999999999999884 999999998888887888877776554433210 0 00 0
Q ss_pred h--HHHHHHHHHHHHHH---H-HHHhhhhhh--HHHhhHHHHHHHHHHHHHHhhhhccCcCcccccCCCccccccccccc
Q 048106 322 G--VVQILLVILFSLYL---R-KISVIGHRI--FLIYAVPLGLAITWAAAFLLTETGAYNYKECDVNVPVSNIISEHCRK 393 (694)
Q Consensus 322 g--~~~~ll~i~~sl~l---~-~i~~~g~~~--~r~~aVLIGi~vG~iva~~lg~~g~~~~~~~~~~~p~~~~~~~~~~~ 393 (694)
. .....+.+++..++ + ...++.+.+ ...-.-++.+++++++++.+...+.+. +
T Consensus 245 ~~~~~~~~~~l~~l~~L~~~k~~~~~~~~k~~~v~~~~~li~vIi~T~~~~~~~~~~~~~--------~----------- 305 (665)
T KOG0236|consen 245 PKTLATLVLSLIFLVVLLLTKELNPKFKKKLFSVPIPFELIVVIIGTLISYIFRLEGRYG--------P----------- 305 (665)
T ss_pred cccchhhhhHHHHHHHHHHHHHhhhhhcccceeecccHHHHHHHHHHHHHHHhccccccC--------C-----------
Confidence 0 01122222221111 2 111111211 122235677777887777764321100 0
Q ss_pred cccccccccccCCccccCCCccccccccccccccchHHHHHHHHHHHHHHhhhcchhhhhhhhhccCCCCCCcccccccc
Q 048106 394 HVSRMKQCRVDSSHALKSSPWFRFPYPLQWGTPVFHWKMAVVMCVVSVIASVDSVGSYHASSLLVASRPPTPGVVSRAIG 473 (694)
Q Consensus 394 ~~~~~~~~~vD~s~~v~~apWf~lP~p~~~G~P~F~~~~il~~l~v~lv~~vEsiG~~~A~~~~~~~~~~~~~~i~Rgi~ 473 (694)
..++ +.-...|...+|.. .+....+..++.+.+++.+|+++--.+.++..+ ..-+-++-++
T Consensus 306 -------~~~~--~i~~g~~~~~lp~~------~~~~~~~~~~~~i~iva~~~~iai~k~fa~~~~----y~vd~nqELi 366 (665)
T KOG0236|consen 306 -------IIVG--EIPRGFPPPSLPPL------SLTPQVIPDAFAIAIVALLEHIAIGKSFASLHG----YKVDSNQELI 366 (665)
T ss_pred -------eeec--cCCCCCCCCCCCCh------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----CeeCCChHHH
Confidence 0010 10112233333311 111234555888899999998766666654322 2223467899
Q ss_pred cchhHHHHHhhhcCCCCcccccccceeeeecccccceehhHHHH-HHHHHHHHHHHHHHHHhCChhhhhHHHHHH
Q 048106 474 LEGLCSVLAGLWGTGTGSTTLTENVHTIAVTKMGSRRAVEIGAG-ILIVLSLIGKVGGFIASIPQVMVAGLLCFM 547 (694)
Q Consensus 474 adGl~silAGl~Gtg~p~TtyseNvGvIalTgvaSR~v~~~aa~-~LIllgf~PK~~allasIP~pVlGG~livl 547 (694)
|-|++++++++|++ .|.|..-.+..+=..+|+.++-..++.++ .++.+- .++.++..||.+|++++.+..
T Consensus 367 AlG~~Ni~sSff~~-~p~tgs~sRSav~~~sG~~T~~s~i~~~~~vl~~l~---~l~p~f~~iP~~vLaaIIi~a 437 (665)
T KOG0236|consen 367 ALGISNILSSFFGC-YPTTGSFSRSAVNIKSGGRTQVAGIVSAALVLLALL---FLGPLFYYIPKCVLAAIIISA 437 (665)
T ss_pred HHHHHHHhhhhhce-EcccchhhHHHHHhhcCCcchHHHHHHHHHHHHHHH---HHHHHhhhhhHHHHHHHHHHH
Confidence 99999999999997 77775555555556677777776554443 333333 234599999999999887653
No 20
>PF11840 DUF3360: Protein of unknown function (DUF3360); InterPro: IPR021794 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 489 to 517 amino acids in length.
Probab=96.52 E-value=0.14 Score=56.46 Aligned_cols=368 Identities=15% Similarity=0.164 Sum_probs=171.9
Q ss_pred CCCCCCCcceeeeccCCCCC-CCCC-------CCCCcceecCCCCChHHHHHHHHHHHHHHHHHHhHHHHHHHhhcCCCc
Q 048106 148 QPRRAPRNEEMVVVDGMDDD-GFTS-------RHSHMKYQLRDTPGLVPIGLYGFQHYLSMLGSLILIPLVIVPAMGGSH 219 (694)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~-~~~~-------~~~~l~y~l~d~Pp~~~~illGlQH~LaM~~~~IvvPlIia~a~Gl~~ 219 (694)
+.||.+.++++++.+.+.+- -+.. .-++..|+.+|--|.. .|.---.+|+++.+ ...++.+|+++
T Consensus 19 ~~hkpaseF~~R~~yL~HeLqIm~pkRw~~nLP~rD~rfE~ED~vPAl----AgtIGkivMvsAv~---aafA~~lgL~~ 91 (492)
T PF11840_consen 19 ELHKPASEFETRSEYLEHELQIMSPKRWRLNLPFRDYRFEWEDLVPAL----AGTIGKIVMVSAVA---AAFAAPLGLSP 91 (492)
T ss_pred HhhCChhhcccHHHHHhhhhhhcCcccccCCCCCcccccchHHhhHHH----HhhhhHHHHHHHHH---HHHhhccCCCh
Confidence 34455556666665553111 1111 1134567777766533 22222234444322 22344568876
Q ss_pred chh------HHHHHHHHHHHHHHHHHHHHhccCcceEeccccchHHHHHHHHH----HHHHHHHHHHHHHhhhHHHHHHH
Q 048106 220 EDT------SNVVSTVLFVSGVTTLLHTFFGSRLPLIQGSSFNFKHIMKELQG----AIIIGSVFQAFLGYSGLMSLLLR 289 (694)
Q Consensus 220 ~~~------~~lIsatl~vsGIaTllQ~~~G~rLPiv~GpSfafi~~~~~~~G----aiivaGl~~ilLg~tgl~~~L~r 289 (694)
+-. ..+|.+.+|+.=+++++.= .++|+=-.||=--.++.+.+.-| --+.-|++-+++++++.-+++.+
T Consensus 92 ~Fv~envR~EllI~a~lFvil~Sgfl~P--~anLAGthgPmIpLIp~ivaaGgHPLalgilvg~fGlil~~~kggS~L~~ 169 (492)
T PF11840_consen 92 EFVIENVRYELLIAALLFVILFSGFLNP--RANLAGTHGPMIPLIPLIVAAGGHPLALGILVGVFGLILSIFKGGSKLVN 169 (492)
T ss_pred hHhhhhhhhhhhHHHHHHHHHHHhccCc--cccccCCCCCcchhhHHHHHcCCCcHHHHHHHHHHHHHHHHhcchhHHHh
Confidence 522 2345555454444444322 34555445554444444332111 12455788889999988899999
Q ss_pred HhCCceehhhhhhhhhhhhhccc---ccccchhhhhHHHH-HHHHHHHHHHHHHHhhhhhhHHHhhHHHHHHHHHHHHHH
Q 048106 290 LINPVVVAPTIAAVGLSFYSYGF---PLVGTCLEIGVVQI-LLVILFSLYLRKISVIGHRIFLIYAVPLGLAITWAAAFL 365 (694)
Q Consensus 290 ~fpPvV~g~vV~lIGlsL~~~g~---~~~g~~~~ig~~~~-ll~i~~sl~l~~i~~~g~~~~r~~aVLIGi~vG~iva~~ 365 (694)
+=.--|.|....-.|+.=....+ ..|....+.+.... ++++...+| ..+.++.||+ .+|.++-+++-+++++
T Consensus 170 LTs~gv~ggLllylG~~G~~~qi~kl~~wa~~~~~~~i~fvvi~~tiv~Y-a~L~k~~KrW---LaIPl~~~~a~~~a~~ 245 (492)
T PF11840_consen 170 LTSHGVCGGLLLYLGFVGLIGQIKKLFAWANGFDMGYIAFVVIIVTIVLY-AYLAKIEKRW---LAIPLCSILAGVLAFA 245 (492)
T ss_pred hhcCccccceeeeehhhhHHHHHHHHHHHHhccCccHHHHHHHHHHHHHH-HHHHHhccch---hhhhHHHHHHHHHHHH
Confidence 98888887644433322111001 11111112221111 111112223 2245566776 6789999999999999
Q ss_pred hhhhccCcCcccccCCCccccccccccccccccccccccCCccccCCCccccccccccccccch-HHHHHHHHHHHH-HH
Q 048106 366 LTETGAYNYKECDVNVPVSNIISEHCRKHVSRMKQCRVDSSHALKSSPWFRFPYPLQWGTPVFH-WKMAVVMCVVSV-IA 443 (694)
Q Consensus 366 lg~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~vD~s~~v~~apWf~lP~p~~~G~P~F~-~~~il~~l~v~l-v~ 443 (694)
+|.- ++... +. +.-++++ .=|..=-.-.+.|+|.++ +-+++++.+... .=
T Consensus 246 lGa~--f~f~t-----~p-----------------glp~lnP----~YWWge~tGw~LglP~~~hfiav~PFAiLAVaMW 297 (492)
T PF11840_consen 246 LGAP--FEFTT-----EP-----------------GLPNLNP----MYWWGEETGWQLGLPTLEHFIAVLPFAILAVAMW 297 (492)
T ss_pred cCCC--ceeec-----CC-----------------CCCCCCC----cccccCCcccccCCCcHHHHHHhccHHHHHHHHh
Confidence 8741 11110 00 1111111 112222222345677644 223333322222 22
Q ss_pred hhhcchhhhhhhhhccCCCCCCc---ccccccccchhHHHHHhhhcCCCCcccccccceeee--ecccccceehhHHHHH
Q 048106 444 SVDSVGSYHASSLLVASRPPTPG---VVSRAIGLEGLCSVLAGLWGTGTGSTTLTENVHTIA--VTKMGSRRAVEIGAGI 518 (694)
Q Consensus 444 ~vEsiG~~~A~~~~~~~~~~~~~---~i~Rgi~adGl~silAGl~Gtg~p~TtyseNvGvIa--lTgvaSR~v~~~aa~~ 518 (694)
+-|.+|+-. .++.+ ..+..++ +++.....-.+=.++++++|. ++.++|=-.=.|- +-|.-=+---++.+++
T Consensus 298 SpDflghrv-Fqeln-ypk~~~kvlMnvDDTm~~~siRQ~vGs~lGG--gN~~SsWgTymIPaaIaKRPIpggAiLtg~~ 373 (492)
T PF11840_consen 298 SPDFLGHRV-FQELN-YPKETKKVLMNVDDTMTMCSIRQIVGSILGG--GNIASSWGTYMIPAAIAKRPIPGGAILTGLL 373 (492)
T ss_pred CchHHHHHH-HHHhc-CchhhcceeecccchhHHHHHHHHHhhcccC--CcccccchhhhhhHHHhcCCCCchHHHHHHH
Confidence 346666543 33432 1111121 357788888888999999984 3433322211221 1121111223445556
Q ss_pred HHHHHHHHHHHHHHHhCChhhhhHHHHH-HHHHHHHhhccccccc
Q 048106 519 LIVLSLIGKVGGFIASIPQVMVAGLLCF-MWAMLAALGLSNLRYS 562 (694)
Q Consensus 519 LIllgf~PK~~allasIP~pVlGG~liv-lfg~i~~sGl~~L~~~ 562 (694)
+|+.++.+-=.- + ++=.||+--++++ +|--+.-+|+++.+..
T Consensus 374 Ci~~av~GyPMd-l-avw~Pvl~vALlvGVflPLleAGmqm~r~~ 416 (492)
T PF11840_consen 374 CIVAAVWGYPMD-L-AVWPPVLRVALLVGVFLPLLEAGMQMTRKG 416 (492)
T ss_pred HHHHHHhcCcch-h-hhcccHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 666655441000 1 1224565555443 3445667899877654
No 21
>PF00955 HCO3_cotransp: HCO3- transporter family Only partial structure; InterPro: IPR011531 Bicarbonate (HCO3 -) transport mechanisms are the principal regulators of pH in animal cells. Such transport also plays a vital role in acid-base movements in the stomach, pancreas, intestine, kidney, reproductive organs and the central nervous system. Functional studies have suggested four different HCO3 - transport modes. Anion exchanger proteins exchange HCO3 - for Cl- in a reversible, electroneutral manner []. Na+/HCO3 - co-transport proteins mediate the coupled movement of Na+ and HCO3 - across plasma membranes, often in an electrogenic manner []. Na- driven Cl-/HCO3 - exchange and K+/HCO3 - exchange activities have also been detected in certain cell types, although the molecular identities of the proteins responsible remain to be determined. Sequence analysis of the two families of HCO3 - transporters that have been cloned to date (the anion exchangers and Na+/HCO3 - co-transporters) reveals that they are homologous. This is not entirely unexpected, given that they both transport HCO3 - and are inhibited by a class of pharmacological agents called disulphonic stilbenes []. They share around ~25-30% sequence identity, which is distributed along their entire sequence length, and have similar predicted membrane topologies, suggesting they have ~10 transmembrane (TM) domains. This domain is found at the C terminus of many bicarbonate transport proteins. It is also found in some plant proteins responsible for boron transport []. In these proteins it covers almost the entire length of the sequence.; GO: 0006820 anion transport, 0016021 integral to membrane; PDB: 1BH7_A 1BTT_A 1BZK_A 1BTQ_A 1BTR_A 1BNX_A 1BTS_A.
Probab=95.72 E-value=0.0088 Score=68.72 Aligned_cols=180 Identities=17% Similarity=0.275 Sum_probs=0.8
Q ss_pred hhhHHHhhHHHHHHHHHHHHHHhhhhccCcCcccccCCCccccccccccccccccccccccCCcccc-CCCccccccccc
Q 048106 344 HRIFLIYAVPLGLAITWAAAFLLTETGAYNYKECDVNVPVSNIISEHCRKHVSRMKQCRVDSSHALK-SSPWFRFPYPLQ 422 (694)
Q Consensus 344 ~~~~r~~aVLIGi~vG~iva~~lg~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~vD~s~~v~-~apWf~lP~p~~ 422 (694)
++++.=|+++|++++-..+.+.++ ... . ..++|. ++.+... .-.|+--|.
T Consensus 277 R~~isDf~v~iaI~~~~~~~~~~~-~~~--~---kL~vp~--------------------~f~pt~~~~r~W~v~p~--- 327 (510)
T PF00955_consen 277 REIISDFGVPIAILIMTLVDYLFG-VDT--P---KLNVPS--------------------SFKPTSPGKRGWFVNPF--- 327 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHhHHhhHHHHHHHHHHHHHHHhc-ccc--c---ccCCCC--------------------CCCCCCCCCCCeecCcc---
Confidence 455667889999998877776554 110 0 011111 1211111 145765442
Q ss_pred cccccch-HHHHHHHHHHHHHHhhhcchhhhhhhhhccC--CC-CCCcccccccccchhHHHHHhhhcCCCCcc-ccccc
Q 048106 423 WGTPVFH-WKMAVVMCVVSVIASVDSVGSYHASSLLVAS--RP-PTPGVVSRAIGLEGLCSVLAGLWGTGTGST-TLTEN 497 (694)
Q Consensus 423 ~G~P~F~-~~~il~~l~v~lv~~vEsiG~~~A~~~~~~~--~~-~~~~~i~Rgi~adGl~silAGl~Gtg~p~T-tyseN 497 (694)
...|.+. +.++++.+.+++.-.+|. .-++.+++. ++ .+....+=-++.-|+.++++|++|- .... +..++
T Consensus 328 ~~~p~w~~~aA~~palll~iL~F~Dq----nIts~ivn~~e~kLkKg~gyH~DL~llgi~~~v~sllGL-Pw~~aa~~~S 402 (510)
T PF00955_consen 328 GSLPWWAIFAAIIPALLLTILFFMDQ----NITSLIVNRPENKLKKGSGYHLDLFLLGIITLVCSLLGL-PWMNAATPQS 402 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHH----hHhHHHhCChhhccCCCCcccHHHHHHHHHHHHHHHcCC-CCcccCccCC
Confidence 1223332 234555566666666662 111122211 11 1111223346788999999999994 3332 23222
Q ss_pred -ceeeee---------------cccccceehhHHHHHHHHHHHHHHHHHHHHhCChhhhhHHHHHHHHHHHHhhccccc
Q 048106 498 -VHTIAV---------------TKMGSRRAVEIGAGILIVLSLIGKVGGFIASIPQVMVAGLLCFMWAMLAALGLSNLR 560 (694)
Q Consensus 498 -vGvIal---------------TgvaSR~v~~~aa~~LIllgf~PK~~allasIP~pVlGG~livlfg~i~~sGl~~L~ 560 (694)
.++-++ .+|..-|+--+...+|+ |+..-+.-++..||.||+.|+.++| |.-...|.+.++
T Consensus 403 ~~Hv~sL~~~~~~~~pGe~~~i~~V~EqRvT~l~~~~Li--gls~~l~pvL~~IP~~VL~GvFlym-G~~sL~gnq~~~ 478 (510)
T PF00955_consen 403 PMHVRSLAVESETSAPGEKPKIVGVREQRVTGLLVHLLI--GLSLFLLPVLKLIPMPVLYGVFLYM-GVTSLSGNQFFE 478 (510)
T ss_dssp -----------------------------------------------------------------------------TT
T ss_pred HHHhCcccEEeccccCCCCCeeCeEEEecccHHHHHHHH--HHHHHHHHHHHHhhHHHHHHHHHhh-eeeeecCccHHH
Confidence 122222 23333343333333344 4444466689999999999999985 555556655443
No 22
>KOG0162 consensus Myosin class I heavy chain [Cytoskeleton]
Probab=71.96 E-value=28 Score=41.87 Aligned_cols=48 Identities=17% Similarity=0.222 Sum_probs=21.7
Q ss_pred CCCCCCCCCCCCCCCCCcceeeeccCCCCCCCCCCCCC-------cceecCCCCC-hHH
Q 048106 138 PTERNQHPQPQPRRAPRNEEMVVVDGMDDDGFTSRHSH-------MKYQLRDTPG-LVP 188 (694)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------l~y~l~d~Pp-~~~ 188 (694)
++|.+-+|+||+.......-..+. -|||..+...+ .++-++|.|+ |++
T Consensus 1033 ~pP~~g~P~PpPp~~~~k~p~~~A---~Y~y~gq~~dEls~~~~diIei~~edpSGWw~ 1088 (1106)
T KOG0162|consen 1033 PPPPAGRPKPPPPAKPPKNPVCEA---LYDYPGQDVDELSFKKGDIIEIMREDPSGWWL 1088 (1106)
T ss_pred CCCCCCCCCccCCCCCCCCcceee---eccCCCCCcccccccCCCEEEEeccCCCcchh
Confidence 334444455555444333332333 45665434333 4455555663 543
No 23
>TIGR00843 benE benzoate transporter. The benzoate transporter family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter.
Probab=67.49 E-value=43 Score=37.95 Aligned_cols=127 Identities=18% Similarity=0.205 Sum_probs=73.2
Q ss_pred HHHHHHHHHHHHHHHHHhccCcc---------eEeccccchHHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHhCCce
Q 048106 226 VSTVLFVSGVTTLLHTFFGSRLP---------LIQGSSFNFKHIMKELQGAIIIGSVFQAFLGYS-GLMSLLLRLINPVV 295 (694)
Q Consensus 226 Isatl~vsGIaTllQ~~~G~rLP---------iv~GpSfafi~~~~~~~GaiivaGl~~ilLg~t-gl~~~L~r~fpPvV 295 (694)
+...+.++|++|++-+.||. .+ +.+|+.--.. ...=+++.+++|++.++++.+ +..-.+...+|+.+
T Consensus 256 ~~~~~~~tGl~sll~ApfGg-~~~nlaaitaAic~G~~ah~d--~~rR~~a~i~~Gv~yll~glfag~i~~l~~~~P~~l 332 (395)
T TIGR00843 256 AKPIIAAAGLAALFAAFAGG-ISIGIAAITAAICMGKDAHED--KDKRWIAAAAAGIFYLLAGLFAGAITALFAALPKEL 332 (395)
T ss_pred chHHHHHHHHHHHHHhccCC-chhhhhHHhHHHhcCcccccC--cCccchHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
Confidence 57888999999999999974 44 4444422110 223468889999999999987 76777888888766
Q ss_pred ehhhhhhhhhhhhhcccccccchh-hhhHHHHHHHHHHHHHHHHHHhhhhhhHHHhhHHHHHHHHHHHHH
Q 048106 296 VAPTIAAVGLSFYSYGFPLVGTCL-EIGVVQILLVILFSLYLRKISVIGHRIFLIYAVPLGLAITWAAAF 364 (694)
Q Consensus 296 ~g~vV~lIGlsL~~~g~~~~g~~~-~ig~~~~ll~i~~sl~l~~i~~~g~~~~r~~aVLIGi~vG~iva~ 364 (694)
+.. +-|+.|+..-........ +-..-.. .++.|.+- ..|-.++.+.+-+.|+++|.+...
T Consensus 333 i~~---laGlAll~~~~~~l~~a~~~~~~r~~-a~~tflvt-----aSg~~~~gigaafWgl~~G~~~~~ 393 (395)
T TIGR00843 333 IAA---LAGLALLGAIAGNIKIALHEDQERDA-ALIAFLAT-----ASGLHFLGIGSAFWGLCAGGLAYF 393 (395)
T ss_pred HHH---HHHHHHHHHHHHHHHHHhcCcchhHH-HHHHHHHH-----HhcCCcccccHHHHHHHHHHHHHH
Confidence 553 446666432111110000 0000000 11112211 123344556778888998876554
No 24
>PF03594 BenE: Benzoate membrane transport protein; InterPro: IPR004711 The benzoate:H+ symporter (BenE) family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter [, ]. Proteins in this family are about 400 residues in length and probably span the membrane 12 times. They exhibit about 30% identity to each other and limited sequence similarity to members of the aromatic acid:H+symporter (AAHS) family of the major facilitator superfamily (MFS). However the degree of similarity with the latter proteins is insufficient to establish homology. Thus, in spite of the sequence similarity and their similar substrate specificities, the BenE family must be considered separately. This family is classified as TC number 2.A.46 under the transporter classification (TC) system [].; GO: 0016021 integral to membrane
Probab=46.95 E-value=17 Score=40.79 Aligned_cols=45 Identities=20% Similarity=0.442 Sum_probs=39.6
Q ss_pred CCcccccccceeeeecccccceehhHHHHHHHHHHHHHHHHHHHHhCChhhhhHHH
Q 048106 489 TGSTTLTENVHTIAVTKMGSRRAVEIGAGILIVLSLIGKVGGFIASIPQVMVAGLL 544 (694)
Q Consensus 489 ~p~TtyseNvGvIalTgvaSR~v~~~aa~~LIllgf~PK~~allasIP~pVlGG~l 544 (694)
.+-.+|.|-+| ++..++++++++|+.+-|..++..||.++..+++
T Consensus 82 ~~~~~~~eavG-----------Afl~~~~Li~l~G~tg~~~rl~~~IP~~ia~AML 126 (378)
T PF03594_consen 82 LPGYSFAEAVG-----------AFLVAGALILLLGVTGLFGRLMRRIPPPIASAML 126 (378)
T ss_pred ccCCCHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
Confidence 33457888888 7999999999999999999999999999887775
No 25
>PHA03419 E4 protein; Provisional
Probab=45.28 E-value=1.1e+02 Score=31.31 Aligned_cols=8 Identities=38% Similarity=0.443 Sum_probs=3.5
Q ss_pred cccCCCCC
Q 048106 66 LEAGRARA 73 (694)
Q Consensus 66 ~~~~~~~~ 73 (694)
||.|++..
T Consensus 45 le~g~~~~ 52 (200)
T PHA03419 45 LETGYPFC 52 (200)
T ss_pred cccCCCCC
Confidence 34444443
No 26
>TIGR00815 sulP high affinity sulphate transporter 1. (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
Probab=39.86 E-value=31 Score=40.51 Aligned_cols=115 Identities=12% Similarity=0.173 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHhhhcchhhhhhhhhccCCCCCCcccccccccchhHHHHHhhhcCCCCcccccccceeeeec-----ccc
Q 048106 433 AVVMCVVSVIASVDSVGSYHASSLLVASRPPTPGVVSRAIGLEGLCSVLAGLWGTGTGSTTLTENVHTIAVT-----KMG 507 (694)
Q Consensus 433 il~~l~v~lv~~vEsiG~~~A~~~~~~~~~~~~~~i~Rgi~adGl~silAGl~Gtg~p~TtyseNvGvIalT-----gva 507 (694)
++.-+.++++.+-++++--. +++ -++ .-|+.+--+..++.++||+ .+.....-...+..++ +..
T Consensus 18 i~aGltv~~~~iP~~~ayA~----lag-lpp-----~~GLysa~~~~iv~alfGs-s~~~i~Gp~a~~sl~~~~~v~~~~ 86 (563)
T TIGR00815 18 LMAGLTVGILLIPQAMAYAI----LAG-LSP-----IYGLYTSFVPPFIYALFGT-SRDIAIGPVAVMSLLLGSVIARVG 86 (563)
T ss_pred HHHHHHHHHHHHHHHHHHHH----HcC-CCc-----hhhhHHHHHHHHHhheecC-CCcccCCHHHHHHHHHHHHHHHhc
Confidence 44455556666666555432 221 111 2357777778888888885 6665554433322211 111
Q ss_pred cc------------eehhHHHHHHHHHHHHHHHHHHHHhCChhhhhHHHHHHHHHHHHhhcccc
Q 048106 508 SR------------RAVEIGAGILIVLSLIGKVGGFIASIPQVMVAGLLCFMWAMLAALGLSNL 559 (694)
Q Consensus 508 SR------------~v~~~aa~~LIllgf~PK~~allasIP~pVlGG~livlfg~i~~sGl~~L 559 (694)
.. .....+|++++++|++ |++.++..||.||+.|.+.-+--.++.+.++.+
T Consensus 87 ~~~~~~~~~~~~a~~l~~l~Gi~~~~~g~l-rlG~l~~~is~~Vi~Gf~~g~a~~i~~~Ql~~~ 149 (563)
T TIGR00815 87 LQYLFDCDAIRLAFTLTLLAGIFQVILGLL-RLGFLIEFLSHAVISGFMTGAAITIGLSQLKGL 149 (563)
T ss_pred CCCCcccHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 3567788899999965 699999999999999999887666775555544
No 27
>PRK11660 putative transporter; Provisional
Probab=34.56 E-value=6.8e+02 Score=29.53 Aligned_cols=77 Identities=16% Similarity=0.236 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHHHHhccCcceEeccccchHHHHHHHHH-----HHHHHHHHH-HHHHhhhHHHHHHHHhCCceehhh
Q 048106 226 VSTVLFVSGVTTLLHTFFGSRLPLIQGSSFNFKHIMKELQG-----AIIIGSVFQ-AFLGYSGLMSLLLRLINPVVVAPT 299 (694)
Q Consensus 226 Isatl~vsGIaTllQ~~~G~rLPiv~GpSfafi~~~~~~~G-----aiivaGl~~-ilLg~tgl~~~L~r~fpPvV~g~v 299 (694)
...-|++-|++.++=++|| .+|..- ++.- ..+..-.| +-++++++. +.+-+ ..-+..++|-.+.+++
T Consensus 313 ~n~EL~a~G~aNi~~~~fg-g~p~~~--s~sr-Sa~n~~aGarT~la~iv~a~~~ll~ll~---l~~ll~~iP~~vLa~i 385 (568)
T PRK11660 313 ANSELVGQGLGNIVAPFFG-GITATA--AIAR-SAANVRAGATSPISAVIHALLVLLALLV---LAPLLSYLPLSAMAAL 385 (568)
T ss_pred CcHHHHHHhHHHHHHHHhC-cccccc--hHHH-HHHHHhcCCCcHHHHHHHHHHHHHHHHH---HHHHHHhCcHHHHHHH
Confidence 4677889999999999995 477532 2211 11222222 223333333 33222 3458899999999999
Q ss_pred hhhhhhhhhh
Q 048106 300 IAAVGLSFYS 309 (694)
Q Consensus 300 V~lIGlsL~~ 309 (694)
++.+|+.++.
T Consensus 386 li~~~~~m~~ 395 (568)
T PRK11660 386 LLMVAWNMSE 395 (568)
T ss_pred HHHHHHHhhh
Confidence 9999998864
No 28
>KOG0559 consensus Dihydrolipoamide succinyltransferase (2-oxoglutarate dehydrogenase, E2 subunit) [Energy production and conversion]
Probab=34.31 E-value=1e+02 Score=34.50 Aligned_cols=13 Identities=23% Similarity=0.442 Sum_probs=10.4
Q ss_pred ChHHHHHHHHHHH
Q 048106 185 GLVPIGLYGFQHY 197 (694)
Q Consensus 185 p~~~~illGlQH~ 197 (694)
.+.++..+++||-
T Consensus 289 ~F~KA~~~Alq~q 301 (457)
T KOG0559|consen 289 GFSKAAAYALQDQ 301 (457)
T ss_pred HHHHHHHHHhhhC
Confidence 4678888999985
No 29
>COG3135 BenE Uncharacterized protein involved in benzoate metabolism [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=31.90 E-value=87 Score=35.15 Aligned_cols=45 Identities=24% Similarity=0.467 Sum_probs=38.8
Q ss_pred CcccccccceeeeecccccceehhHHHHHHHHHHHHHHHHHHHHhCChhhhhHHHH
Q 048106 490 GSTTLTENVHTIAVTKMGSRRAVEIGAGILIVLSLIGKVGGFIASIPQVMVAGLLC 545 (694)
Q Consensus 490 p~TtyseNvGvIalTgvaSR~v~~~aa~~LIllgf~PK~~allasIP~pVlGG~li 545 (694)
+--+|.|-+| +++.++..++++|++..|+.++..||.++..+++-
T Consensus 98 ~g~s~~eaVG-----------AfiVt~~li~l~G~~~~l~rl~~~IP~sla~AmlA 142 (402)
T COG3135 98 GGLSFAEAVG-----------AFIVTGALIILCGLTGPLTRLMRIIPPSLAAAMLA 142 (402)
T ss_pred CCCCHHHHHH-----------HHHHHHHHHHHHhhhHHHHHHHHhCChHHHHHHHH
Confidence 3447888888 79999999999999999999999999988766653
No 30
>KOG4085 consensus Uncharacterized conserved protein [Function unknown]
Probab=30.86 E-value=61 Score=31.78 Aligned_cols=47 Identities=23% Similarity=0.275 Sum_probs=39.5
Q ss_pred cccccceehhHHHHHHHHHHHHHHHHHHHHhCChhhhhHHHHHHHHHHHHh
Q 048106 504 TKMGSRRAVEIGAGILIVLSLIGKVGGFIASIPQVMVAGLLCFMWAMLAAL 554 (694)
Q Consensus 504 TgvaSR~v~~~aa~~LIllgf~PK~~allasIP~pVlGG~livlfg~i~~s 554 (694)
-|-.+|-+.++++++.+++|++. .++.=|...++|++-++-|++.+.
T Consensus 28 ~r~l~rl~gilgaf~~~~fGvf~----~ITls~~c~vAgvlqm~agfivll 74 (175)
T KOG4085|consen 28 YRWLCRLSGILGAFSCAIFGVFN----CITLSPLCIVAGVLQMMAGFIVLL 74 (175)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh----HHhhhHHHHHHHHHHHHHHHHHHH
Confidence 46667888999999999999877 888899999999998887777653
No 31
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []. Characterised proteins in this entry include: Xanthine permease PbuX, involved in cellualar xanthine transport [] Uric acid permeases which promotes uptake of uric acid into the cell in limiting-nitrogen conditions [] Uracil permease [] Sodium-dependent vitamin C transporter, a sodium/ascorbate cotransporter mediating electrogenic uptake of Vitamin C [] These proteins generally contain 12 transmembrane regions. Many members of this family are uncharacterised and may transport other substrates eg. RutG is likely to transport pyrimidines into the cell [].; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3QE7_A.
Probab=28.15 E-value=3.1e+02 Score=30.59 Aligned_cols=90 Identities=18% Similarity=0.253 Sum_probs=52.5
Q ss_pred HhhcCCCcchhHHHHHHHHHHHHHHHHHHHHhccCcceEeccccchHHHHHHH----HHHHHHHHHHHHHHHhhhHHHHH
Q 048106 212 VPAMGGSHEDTSNVVSTVLFVSGVTTLLHTFFGSRLPLIQGSSFNFKHIMKEL----QGAIIIGSVFQAFLGYSGLMSLL 287 (694)
Q Consensus 212 a~a~Gl~~~~~~~lIsatl~vsGIaTllQ~~~G~rLPiv~GpSfafi~~~~~~----~GaiivaGl~~ilLg~tgl~~~L 287 (694)
++..|.+.++ ..-+..++++-|++|++=+++|+ .|..-- -.-.+.++.- -=..+.++++.+++++++....+
T Consensus 256 ~~~~~~~~~~-~~~~~r~l~~dg~~~~l~gl~G~-~~~t~~--~en~g~i~~t~v~Sr~~~~~a~~~~i~~~~~p~~~~l 331 (389)
T PF00860_consen 256 ARIAGKDDPR-PPRIRRGLLADGLGTILAGLFGT-SPTTTY--SENAGGIAATGVASRRVGLTAGVILILFGLSPKFAPL 331 (389)
T ss_dssp HHHHTS-TCC-CCCHHHHHHHHHHHHHHHHHHT----EEE---HHHHHHHHHHTB--HHHHHHHHHHHHHHT--HHHHHH
T ss_pred HHHhCCCCcc-chhhcccceeeeeeeeechhhcC-CCCccc--cccchhhhhhccccceeeeHHHHHHHHHhhHHHHHHH
Confidence 4445555443 34578999999999999999987 554221 1111122221 22456788888889888777888
Q ss_pred HHHhCCcee-hhhhhhhhh
Q 048106 288 LRLINPVVV-APTIAAVGL 305 (694)
Q Consensus 288 ~r~fpPvV~-g~vV~lIGl 305 (694)
...+|..|. ++.+.+.|.
T Consensus 332 ~~~IP~~v~gg~~lv~~g~ 350 (389)
T PF00860_consen 332 FASIPSPVIGGPLLVLFGM 350 (389)
T ss_dssp HTTS-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccchHHHHHH
Confidence 888888874 444445553
No 32
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=28.00 E-value=2.3e+02 Score=34.83 Aligned_cols=44 Identities=11% Similarity=0.029 Sum_probs=31.3
Q ss_pred HHHHHHhhcCCCcchhHHHHHHHHHHHHHHHHHHHH----hccCcceEe
Q 048106 207 IPLVIVPAMGGSHEDTSNVVSTVLFVSGVTTLLHTF----FGSRLPLIQ 251 (694)
Q Consensus 207 vPlIia~a~Gl~~~~~~~lIsatl~vsGIaTllQ~~----~G~rLPiv~ 251 (694)
.|.+.. .+|++..+...+.+..++...+++++-.+ +|.|..++.
T Consensus 190 lp~i~~-~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii 237 (742)
T TIGR01299 190 LPSAEK-DLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLI 237 (742)
T ss_pred HHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHH
Confidence 344433 47899888888888888888899988775 566544433
No 33
>PF15234 LAT: Linker for activation of T-cells
Probab=26.10 E-value=2e+02 Score=29.34 Aligned_cols=8 Identities=63% Similarity=1.568 Sum_probs=4.2
Q ss_pred CCCCCCCC
Q 048106 11 KPGPWPPA 18 (694)
Q Consensus 11 ~~~~~~p~ 18 (694)
...||||+
T Consensus 57 t~~pwp~a 64 (230)
T PF15234_consen 57 TLAPWPPA 64 (230)
T ss_pred CCCCCCcc
Confidence 44555555
No 34
>KOG2675 consensus Adenylate cyclase-associated protein (CAP/Srv2p) [Cytoskeleton; Signal transduction mechanisms]
Probab=24.85 E-value=2e+02 Score=33.00 Aligned_cols=14 Identities=36% Similarity=0.641 Sum_probs=6.6
Q ss_pred chhhhhCCCcCccc
Q 048106 28 SWAKRTGFRPKFSG 41 (694)
Q Consensus 28 ~~~~~~~~~~~~~~ 41 (694)
.|-|+-|=.|+-|+
T Consensus 212 ~W~~~g~~~~~~sa 225 (480)
T KOG2675|consen 212 VWNKDGGAAPDASA 225 (480)
T ss_pred eecCCCCccccccc
Confidence 45444444444444
No 35
>COG1620 LldP L-lactate permease [Energy production and conversion]
Probab=23.74 E-value=3.8e+02 Score=31.59 Aligned_cols=81 Identities=14% Similarity=0.087 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHhhhcchhhhhhhhhccCCCCCCcccccccccchhHHHHHhhhcCCCCcccccccceeeeecccccceeh
Q 048106 433 AVVMCVVSVIASVDSVGSYHASSLLVASRPPTPGVVSRAIGLEGLCSVLAGLWGTGTGSTTLTENVHTIAVTKMGSRRAV 512 (694)
Q Consensus 433 il~~l~v~lv~~vEsiG~~~A~~~~~~~~~~~~~~i~Rgi~adGl~silAGl~Gtg~p~TtyseNvGvIalTgvaSR~v~ 512 (694)
.+.+..+++-.+.|-.|++..+-+... +--+++|++=-+++=.+++++=|.-|= ++ +.
T Consensus 69 ~IV~~AI~Lyk~~~~sG~f~~Ir~~i~-~It~DrRiQ~llIg~~FgaflEGAaGF--Gt-------------------P~ 126 (522)
T COG1620 69 WIIFGAIFLYKMSVKSGAFDIIRKSLA-NITPDRRIQLLLIGFCFGAFLEGAAGF--GT-------------------PA 126 (522)
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHh-ccCCcchhhhhhHHHHHHHHHhhhccc--CC-------------------hH
Confidence 456788899999999999998765442 223456788888888999999887653 33 68
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhC
Q 048106 513 EIGAGILIVLSLIGKVGGFIASI 535 (694)
Q Consensus 513 ~~aa~~LIllgf~PK~~allasI 535 (694)
.++|-+|+-+||-|--++.++.|
T Consensus 127 AI~ApLLVgLGF~PL~AA~l~LI 149 (522)
T COG1620 127 AIAAPLLVGLGFNPLKAAGLCLI 149 (522)
T ss_pred HHHHHHHHHcCCChHHHHHHHHH
Confidence 89999999999999777776655
No 36
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=23.71 E-value=1.1e+03 Score=26.50 Aligned_cols=73 Identities=19% Similarity=0.229 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCcceEeccccchHHHHHHH-----HHHHHHHHHHHHHHHhhhHHHHHHHHhCCceehh
Q 048106 224 NVVSTVLFVSGVTTLLHTFFGSRLPLIQGSSFNFKHIMKEL-----QGAIIIGSVFQAFLGYSGLMSLLLRLINPVVVAP 298 (694)
Q Consensus 224 ~lIsatl~vsGIaTllQ~~~G~rLPiv~GpSfafi~~~~~~-----~GaiivaGl~~ilLg~tgl~~~L~r~fpPvV~g~ 298 (694)
.-++..++..|++|++=+++| ..|.. +|.-.....+. .-+.+++|++.+++++++....+...+|..|.+.
T Consensus 253 ~~~~~~l~~~Gi~~i~aglfG-~~p~t---~~~~~~~~~~~tg~~sr~~~~~~~~~lil~~l~~~~~~l~~~iP~~vlgg 328 (406)
T TIGR03173 253 KDLAGGLRADGLGSALGGLFN-TFPYT---SFSQNVGLVQLTGVKSRYVVAAAGVILVLLGLFPKLAALVASIPQPVLGG 328 (406)
T ss_pred hhccchHHhccHHHHHHHHhC-CCCCc---chhhhHHHHHHhCCCchHhHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 346789999999999999998 47742 23211111111 1224788899999988777788999999988887
Q ss_pred hh
Q 048106 299 TI 300 (694)
Q Consensus 299 vV 300 (694)
+.
T Consensus 329 ~~ 330 (406)
T TIGR03173 329 AG 330 (406)
T ss_pred HH
Confidence 33
No 37
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=23.30 E-value=2.8e+02 Score=31.35 Aligned_cols=73 Identities=19% Similarity=0.217 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHHHHHHhccCcceEeccccchHH-----HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhCCceehhh
Q 048106 225 VVSTVLFVSGVTTLLHTFFGSRLPLIQGSSFNFKH-----IMKELQGAIIIGSVFQAFLGYSGLMSLLLRLINPVVVAPT 299 (694)
Q Consensus 225 lIsatl~vsGIaTllQ~~~G~rLPiv~GpSfafi~-----~~~~~~GaiivaGl~~ilLg~tgl~~~L~r~fpPvV~g~v 299 (694)
-++..+++-|++|++=+++|+ .|..- +..-.+ ..+.-. +..++|++.+++++++-...+...+|..|.+.+
T Consensus 270 ~~~r~l~adGl~~i~aglfG~-~p~t~--~sen~g~~~~T~~~sr~-~~~~~a~~~i~~~l~pk~~~l~~~iP~~vlgg~ 345 (415)
T TIGR00801 270 RLHRGVLADGLATLLAGLFGG-FPNTT--FAQNIGVIALTRVASRW-VIVGAAVILIALGFFPKIAALITSIPSPVLGGA 345 (415)
T ss_pred cccchHHHhhHHHHHHHhcCC-CCCcc--hhhhheeeeecCCCchH-HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 467899999999999999984 66522 110001 111122 567788888898887667888899998888864
Q ss_pred hh
Q 048106 300 IA 301 (694)
Q Consensus 300 V~ 301 (694)
.+
T Consensus 346 ~l 347 (415)
T TIGR00801 346 SI 347 (415)
T ss_pred HH
Confidence 44
No 38
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]
Probab=23.16 E-value=1.4e+02 Score=35.27 Aligned_cols=117 Identities=15% Similarity=0.150 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHhhhcchhhhhhhhhccCCCCCCcccccccccchhHHHHHhhhcCCCCcccccccceeeee--ccccc-
Q 048106 432 MAVVMCVVSVIASVDSVGSYHASSLLVASRPPTPGVVSRAIGLEGLCSVLAGLWGTGTGSTTLTENVHTIAV--TKMGS- 508 (694)
Q Consensus 432 ~il~~l~v~lv~~vEsiG~~~A~~~~~~~~~~~~~~i~Rgi~adGl~silAGl~Gtg~p~TtyseNvGvIal--TgvaS- 508 (694)
-++.-+.+.++..=|+++--.+.+- + -..|+.+.=++.++.++||+ .+.-..+.-.+...+ .-+++
T Consensus 24 Dl~AGltva~valP~ama~a~~aGv-------~---p~~GLyas~i~~~v~alfGg-s~~~i~GPt~a~~~v~a~~i~~~ 92 (554)
T COG0659 24 DLLAGLTVAAVALPLAMAFAIAAGV-------P---PEAGLYASIVAGIIYALFGG-SRGLISGPTGAFAVVLAAVIASL 92 (554)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHcCC-------C---HHHHHHHHHHHHHHHHHHcC-CccceeccchhhHHHHHHHHHHH
Confidence 4556666777777777665442221 1 14589999999999999994 777655443332222 11110
Q ss_pred -c-------eehhHHHHHHHHHHHHHHHHHHHHhCChhhhhHHHHHHHHHHHHhhccccc
Q 048106 509 -R-------RAVEIGAGILIVLSLIGKVGGFIASIPQVMVAGLLCFMWAMLAALGLSNLR 560 (694)
Q Consensus 509 -R-------~v~~~aa~~LIllgf~PK~~allasIP~pVlGG~livlfg~i~~sGl~~L~ 560 (694)
. -+...+|+|++++|++ |++.++.-||.||+-|.+.=+--.|+...+..+.
T Consensus 93 ~~~g~~~~~~~tllaGv~~i~~G~l-RLG~li~fip~pVl~Gf~~Giai~I~~~Ql~~~~ 151 (554)
T COG0659 93 VETGLALAFLATLLAGVFQILLGLL-RLGRLIRFIPRPVLIGFTAGIAILIILTQLPVLL 151 (554)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 1 1455678888888865 7999999999999998887665556666665443
No 39
>COG4666 TRAP-type uncharacterized transport system, fused permease components [General function prediction only]
Probab=23.13 E-value=35 Score=40.56 Aligned_cols=24 Identities=46% Similarity=0.825 Sum_probs=21.1
Q ss_pred hhhhCCCcCccc--cccCCCCCccCC
Q 048106 30 AKRTGFRPKFSG--ETNASDSGQISL 53 (694)
Q Consensus 30 ~~~~~~~~~~~~--~~~~~~~~~~~~ 53 (694)
.||.||+|.|.| |+.||..||+-.
T Consensus 259 MkR~Gy~~~~AgAvEaaAS~GGQimP 284 (642)
T COG4666 259 MKRAGYPPEFAGAVEAAASTGGQLMP 284 (642)
T ss_pred HHhcCCChhcccceehhhhcCCchhh
Confidence 599999999999 678888899874
No 40
>COG4129 Predicted membrane protein [Function unknown]
Probab=21.92 E-value=5.6e+02 Score=28.47 Aligned_cols=19 Identities=11% Similarity=0.359 Sum_probs=11.2
Q ss_pred HHhhHHHHHHHHHHHHHHh
Q 048106 348 LIYAVPLGLAITWAAAFLL 366 (694)
Q Consensus 348 r~~aVLIGi~vG~iva~~l 366 (694)
|..-+++|++++.++-+.+
T Consensus 129 r~l~~~vG~~~a~lvn~~~ 147 (332)
T COG4129 129 RFLLVFVGVGVAFLVNLVM 147 (332)
T ss_pred HHHHHHHHHHHHHHHhhhc
Confidence 4455667777666655443
No 41
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=21.86 E-value=5.9e+02 Score=29.84 Aligned_cols=44 Identities=9% Similarity=0.088 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHhhcCCCcchhHHHHHHHHHHHH
Q 048106 187 VPIGLYGFQHYLSMLGSLILIPLVIVPAMGGSHEDTSNVVSTVLFVSG 234 (694)
Q Consensus 187 ~~~illGlQH~LaM~~~~IvvPlIia~a~Gl~~~~~~~lIsatl~vsG 234 (694)
..+++-++-|..+..|-.+=-.-+++..+|.+.+ .+--|++++|
T Consensus 426 ~vTFigSIlWIA~fSYLMVWwa~~iGeT~gIp~e----IMGLTiLAAG 469 (588)
T KOG1307|consen 426 PVTFIGSILWIAAFSYLMVWWANIIGETLGIPDE----IMGLTILAAG 469 (588)
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHHcccccCCCHH----HhhhhhhhcC
Confidence 4567777777765555444455566666777765 3444545444
No 42
>PHA03247 large tegument protein UL36; Provisional
Probab=20.35 E-value=1.3e+03 Score=32.91 Aligned_cols=13 Identities=15% Similarity=0.243 Sum_probs=7.6
Q ss_pred CCCCCCchhhhhC
Q 048106 22 TPVPPSSWAKRTG 34 (694)
Q Consensus 22 ~~~~~~~~~~~~~ 34 (694)
+.-+++-|...+|
T Consensus 2848 P~~~~~g~~~~~~ 2860 (3151)
T PHA03247 2848 PSLPLGGSVAPGG 2860 (3151)
T ss_pred CCCCCCCccCCCC
Confidence 4455667766653
Done!