BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048114
(234 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q4KLT0|RN217_XENLA Probable E3 ubiquitin-protein ligase RNF217 OS=Xenopus laevis
GN=rnf217 PE=2 SV=1
Length = 282
Score = 77.4 bits (189), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 87/187 (46%), Gaps = 14/187 (7%)
Query: 50 CDICVEPKSTDESFSIKGCSHSYCTECMTKYVASKLQENITSINCPVADCKGVLEPEYCR 109
C +C+E +S + C C EC+ +Y++S++Q I CP+ +C L+
Sbjct: 3 CRVCLEDRSIK---PLPCCKKPVCDECLKRYLSSQVQLGQAEIQCPITECNKHLDESTIL 59
Query: 110 DILPEDVFNRWGNALCEAVILGAQKFYCP-------FKDCSALLIDDGGEAIRESVCPDC 162
LP D ++ L E + + CP FK + + E + CP C
Sbjct: 60 YSLPHDDIIKYKYFL-ELSRMDSSTKPCPQCKHFTTFKRKTHIPNPTKSENKLKIQCPSC 118
Query: 163 NRMFCAQCKVPWHAGIRCAEFQKLHKDEREPEDIMLMTLAQKENWRRCPNCKIFVEKKEG 222
++C +C PWH G+ C E++K K R + + + N ++CP CK+ +++ EG
Sbjct: 119 QFIWCFRCHAPWHEGVNCREYKKGDKLLRHWANEIEHG---QRNAQKCPRCKVHIQRTEG 175
Query: 223 CRYMRCS 229
C +M CS
Sbjct: 176 CDHMTCS 182
>sp|P50876|R144A_HUMAN Probable E3 ubiquitin-protein ligase RNF144A OS=Homo sapiens
GN=RNF144A PE=1 SV=2
Length = 292
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 7/205 (3%)
Query: 32 SNSKNEVTIEERIETSFICDICVEPKSTDESFSIKGCSHSYCTECMTKYVASKLQENI-T 90
+ ++ T + ++ C +C+ ++ +I C +CT C+ +YV ++E + T
Sbjct: 2 TTTRYRPTWDLALDPLVSCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLET 61
Query: 91 SINCPVADC--KGVLEPEYCRDILPEDVFNRWGNALCE-AVILGAQKFYCPFKDCSAL-- 145
+I+CP A C +G L+ ++ ++ R+ E V+ + +CP C A+
Sbjct: 62 AISCPDAACPKQGHLQENEIECMVAAEIMQRYKKLQFEREVLFDPCRTWCPASTCQAVCQ 121
Query: 146 LIDDGGEAIRESVCPDCNRMFCAQCKVPWHAGIRCAEFQKLHKDEREPEDIMLMTLAQKE 205
L D G + + C C FC+ CK WH G C E + E M
Sbjct: 122 LQDVGLQTPQPVQCKACRMEFCSTCKASWHPGQGCPETMPITFLPGETSAAFKME-EDDA 180
Query: 206 NWRRCPNCKIFVEKKEGCRYMRCSS 230
+RCP CK+++E+ EGC M C +
Sbjct: 181 PIKRCPKCKVYIERDEGCAQMMCKN 205
>sp|A4IIY1|R144A_XENTR Probable E3 ubiquitin-protein ligase RNF144A OS=Xenopus tropicalis
GN=rnf144a PE=2 SV=1
Length = 292
Score = 75.1 bits (183), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 97/205 (47%), Gaps = 7/205 (3%)
Query: 32 SNSKNEVTIEERIETSFICDICVEPKSTDESFSIKGCSHSYCTECMTKYVASKLQENI-T 90
+ ++ T + +E C +C+ + ++ +I C +CT C+ +YV ++E + T
Sbjct: 2 TTARYRPTWDLALEPLVSCKLCLGEYTVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLET 61
Query: 91 SINCPVADC--KGVLEPEYCRDILPEDVFNRWGNALCEA-VILGAQKFYCPFKDCSAL-- 145
+I+CP A C +G L+ ++ ++ ++ E ++L + +CP C A+
Sbjct: 62 AISCPDASCPKRGHLQENEIECMVAAEIMQKYKKLQFEKEILLDPCRTWCPSSSCQAVCK 121
Query: 146 LIDDGGEAIRESVCPDCNRMFCAQCKVPWHAGIRCAEFQKLHKDEREPEDIMLMTLAQKE 205
L + G + + C C+ FC+ CK WH G C E + + +L
Sbjct: 122 LQEKGIQNPQLVQCSACDIEFCSACKANWHPGQGCPENMAITFLPGDSSSF-FKSLEDDV 180
Query: 206 NWRRCPNCKIFVEKKEGCRYMRCSS 230
+RCP CK+++E+ EGC M C +
Sbjct: 181 PIKRCPKCKVYIERDEGCAQMMCKN 205
>sp|Q925F3|R144A_MOUSE Probable E3 ubiquitin-protein ligase RNF144A OS=Mus musculus
GN=Rnf144a PE=1 SV=1
Length = 292
Score = 74.3 bits (181), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 7/205 (3%)
Query: 32 SNSKNEVTIEERIETSFICDICVEPKSTDESFSIKGCSHSYCTECMTKYVASKLQENI-T 90
+ ++ T + ++ C +C+ ++ +I C +CT C+ +YV ++E + T
Sbjct: 2 TTARYRPTWDLALDPLVSCKLCLGEYPAEQMTTIAQCQCIFCTLCLKQYVELLIKEGLET 61
Query: 91 SINCPVADC--KGVLEPEYCRDILPEDVFNRWGNALCE-AVILGAQKFYCPFKDCSAL-- 145
+I+CP A C +G L+ ++ ++ R+ E V+ + +CP C A+
Sbjct: 62 AISCPDAACPKQGHLQENEIECMVAAEIMQRYKKLQFEREVLFDPCRTWCPASTCQAVCQ 121
Query: 146 LIDDGGEAIRESVCPDCNRMFCAQCKVPWHAGIRCAEFQKLHKDEREPEDIMLMTLAQKE 205
L D G + + C C+ FC+ CK WH G C E + E M
Sbjct: 122 LQDIGLQTPQLVQCKACDMEFCSACKARWHPGQGCPETMPITFLPGETSSAFKMEEGDAP 181
Query: 206 NWRRCPNCKIFVEKKEGCRYMRCSS 230
+RCP C++++E+ EGC M C +
Sbjct: 182 I-KRCPKCRVYIERDEGCAQMMCKN 205
>sp|D3YYI7|RN217_MOUSE Probable E3 ubiquitin-protein ligase RNF217 OS=Mus musculus
GN=Rnf217 PE=3 SV=2
Length = 515
Score = 74.3 bits (181), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 82/193 (42%), Gaps = 22/193 (11%)
Query: 48 FICDICVEPKSTDESFSIKGCSHSYCTECMTKYVASKLQENITSINCPVADCKGVLEPEY 107
+C +C+E K + C + C EC+ Y++S++Q I CPV +C LE
Sbjct: 234 LMCRVCLEDKPIK---PLPCCKKAVCEECLKIYLSSQVQLGQVEIKCPVTECFEFLEETT 290
Query: 108 C------RDILPEDVFNRWGNALCEAVILGAQKFYCPFKDCSALLIDDGGEAIRESVCPD 161
D + F G K + FK + E+ + CP
Sbjct: 291 VVYNLTHEDSIKYKYFLELGRIDSSTKPCPQCKHFTTFKKKGHIPTPSRSESRYKIQCPT 350
Query: 162 CNRMFCAQCKVPWHAGIRCAEFQKLHKDEREPEDIMLMTLAQ-----KENWRRCPNCKIF 216
C ++C +C PWH G+ C E++K D +L A + N ++CP CKI
Sbjct: 351 CQLIWCFKCHSPWHEGVNCKEYKK--------GDKLLRHWASEIEHGQRNAQKCPKCKIH 402
Query: 217 VEKKEGCRYMRCS 229
+++ EGC +M CS
Sbjct: 403 IQRTEGCDHMTCS 415
>sp|Q7Z419|R144B_HUMAN E3 ubiquitin-protein ligase RNF144B OS=Homo sapiens GN=RNF144B PE=1
SV=1
Length = 303
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 87/189 (46%), Gaps = 13/189 (6%)
Query: 48 FICDICVEPKSTDESFSIKGCSHSYCTECMTKYVASKLQENITS-INCPVADC--KGVLE 104
C +C+ +S D+ +++ C +CT C+ +Y+ ++E S I CP C G L+
Sbjct: 28 ITCKLCLCEQSLDKMTTLQECQCIFCTACLKQYMQLAIREGCGSPITCPDMVCLNHGTLQ 87
Query: 105 PEYCRDILPEDVFNRWGNALCE-AVILGAQKFYCPFKDCSALL----IDDGGEAIRESVC 159
++P D F + E V L + +CP DC + D G + E C
Sbjct: 88 EAEIACLVPVDQFQLYQRLKFEREVHLDPYRTWCPVADCQTVCPVASSDPGQPVLVE--C 145
Query: 160 PDCNRMFCAQCKVPWHAGIRCAEFQKLHKDEREPEDIMLMTLAQKENWRRCPNCKIFVEK 219
P C+ FC+ CK WHA + C + Q + E L + ++CP C++++E+
Sbjct: 146 PSCHLKFCSCCKDAWHAEVSCRDSQPI---VLPTEHRALFGTDAEAPIKQCPVCRVYIER 202
Query: 220 KEGCRYMRC 228
EGC M C
Sbjct: 203 NEGCAQMMC 211
>sp|A5PK27|R144B_BOVIN E3 ubiquitin-protein ligase RNF144B OS=Bos taurus GN=RNF144B PE=2
SV=1
Length = 304
Score = 70.9 bits (172), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 11/186 (5%)
Query: 50 CDICVEPKSTDESFSIKGCSHSYCTECMTKYVASKLQENITS-INCPVADC--KGVLEPE 106
C +C+ +S D+ +++ C +CT C+ +Y+ ++E S I CP C G L+
Sbjct: 31 CKLCLCEQSLDKMTTLQECRCIFCTACLKQYMQLAIREGCGSPITCPDMVCLNHGTLQEA 90
Query: 107 YCRDILPEDVFNRWGNALCE-AVILGAQKFYCPFKDCSAL---LIDDGGEAIRESVCPDC 162
++P D F + E V L + +CP DC + D G+ + CP C
Sbjct: 91 EIACLVPVDQFQLYQRLKFEREVHLDPCRTWCPVADCQTVCPVATSDPGQPVLVE-CPSC 149
Query: 163 NRMFCAQCKVPWHAGIRCAEFQKLHKDEREPEDIMLMTLAQKENWRRCPNCKIFVEKKEG 222
+ FC+ CK WHA + C + Q E L ++CP C++++E+ EG
Sbjct: 150 HLKFCSCCKDAWHAEVSCRDSQ---PGILPTEHGTLFGTETDAPIKQCPVCRVYIERNEG 206
Query: 223 CRYMRC 228
C M C
Sbjct: 207 CAQMMC 212
>sp|Q8BKD6|R144B_MOUSE E3 ubiquitin-protein ligase RNF144B OS=Mus musculus GN=Rnf144b PE=2
SV=2
Length = 301
Score = 70.5 bits (171), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 83/185 (44%), Gaps = 11/185 (5%)
Query: 50 CDICVEPKSTDESFSIKGCSHSYCTECMTKYVASKLQENITS-INCPVADC--KGVLEPE 106
C +C+ +S D+ ++ C +CT C+ +Y+ ++E S I CP C G L+
Sbjct: 30 CKLCLCEQSLDKMTMLQECQCIFCTPCLKQYMVLSIREGCGSPITCPDMVCLNHGTLQET 89
Query: 107 YCRDILPEDVFNRWGNALCE-AVILGAQKFYCPFKDCSALLIDDGGEAIRESV--CPDCN 163
++P D F + E V + + +CP DC + G+ + + CP C+
Sbjct: 90 EIACLVPLDEFQLYQRLKFEREVHMDPLRTWCPVADCQTVCHISAGDPGQPVLVECPSCH 149
Query: 164 RMFCAQCKVPWHAGIRCAEFQKLHKDEREPEDIMLMTLAQKENWRRCPNCKIFVEKKEGC 223
FC+ CK WH C + Q PE L ++CP C+I++E+ EGC
Sbjct: 150 LKFCSCCKDAWHEESSCRDSQ-----SAMPEHGALFGTDADAPIKQCPVCRIYIERNEGC 204
Query: 224 RYMRC 228
M C
Sbjct: 205 AQMMC 209
>sp|Q9JI90|RNF14_MOUSE E3 ubiquitin-protein ligase RNF14 OS=Mus musculus GN=Rnf14 PE=2
SV=2
Length = 485
Score = 70.5 bits (171), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 89/209 (42%), Gaps = 28/209 (13%)
Query: 48 FICDICVEPKSTDESFSIKGCSHSYCTECMTKYVASKLQEN-ITSINCPVADCKGVLEPE 106
F+C IC K + C H YC C+ Y ++++ + +NCP C V P
Sbjct: 219 FLCSICFCEKLGSDCMYFLECKHVYCKACLKDYFEIQIKDGQVKCLNCPEPQCPSVATPG 278
Query: 107 YCRDILPEDVFNRWGNALCEAVI-LGAQKFYCPFKDCSALLIDDGGEAIRESVCPDCNRM 165
++++ D+F R+ L ++ + L A YCP C ++ + G + ++C CN
Sbjct: 279 QVKELVEADLFARYDRLLLQSTLDLMADVVYCPRPCCQLPVMQEPGGTM--AICSSCNFA 336
Query: 166 FCAQCKVPWHA-----------------GIRCAEFQKLHKDEREPEDIMLMTLAQKE--- 205
FC C++ +H ++ E K ++R + ++ L + E
Sbjct: 337 FCTLCRLTYHGLSPCKVTAEKLIDLRNEYLQADEATKRFLEQRYGKRVIQKALEEMESKD 396
Query: 206 ----NWRRCPNCKIFVEKKEGCRYMRCSS 230
N + CP C ++K +GC M C+
Sbjct: 397 WLEKNSKSCPCCGTPIQKLDGCNKMTCTG 425
>sp|Q9UBS8|RNF14_HUMAN E3 ubiquitin-protein ligase RNF14 OS=Homo sapiens GN=RNF14 PE=1
SV=1
Length = 474
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 88/209 (42%), Gaps = 28/209 (13%)
Query: 48 FICDICVEPKSTDESFSIKGCSHSYCTECMTKYVASKLQEN-ITSINCPVADCKGVLEPE 106
F+C IC K E C H YC C+ Y ++++ + +NCP C V P
Sbjct: 218 FLCSICFCEKLGSECMYFLECRHVYCKACLKDYFEIQIRDGQVQCLNCPEPKCPSVATPG 277
Query: 107 YCRDILPEDVFNRWGNALCEAVI-LGAQKFYCPFKDCSALLIDDGGEAIRESVCPDCNRM 165
++++ ++F R+ L ++ + L A YCP C ++ + G + +C CN
Sbjct: 278 QVKELVEAELFARYDRLLLQSSLDLMADVVYCPRPCCQLPVMQEPGCTM--GICSSCNFA 335
Query: 166 FCAQCKVPWHA-----------------GIRCAEFQKLHKDEREPEDIMLMTLAQKE--- 205
FC C++ +H ++ E K D+R + ++ L + E
Sbjct: 336 FCTLCRLTYHGVSPCKVTAEKLMDLRNEYLQADEANKRLLDQRYGKRVIQKALEEMESKE 395
Query: 206 ----NWRRCPNCKIFVEKKEGCRYMRCSS 230
N + CP C +EK +GC M C+
Sbjct: 396 WLEKNSKSCPCCGTPIEKLDGCNKMTCTG 424
>sp|Q6DH94|R1442_DANRE Probable E3 ubiquitin-protein ligase RNF144A-B OS=Danio rerio
GN=rnf144ab PE=2 SV=1
Length = 293
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 96/203 (47%), Gaps = 6/203 (2%)
Query: 32 SNSKNEVTIEERIETSFICDICVEPKSTDESFSIKGCSHSYCTECMTKYVASKLQENI-T 90
S+S+ E + + + C +C+ ++ +I C +C+ C+ +YV ++E + T
Sbjct: 2 SSSRYEPSWDVDLAPLLSCKLCLGEFPLEQMTTISQCQCIFCSLCLKQYVELLIKEGLET 61
Query: 91 SINCPVADC--KGVLEPEYCRDILPEDVFNRWGNALCE-AVILGAQKFYCPFKDCSALL- 146
+I+CP + C +G L ++ +V + E V+L + +CP C A+
Sbjct: 62 AISCPDSACPKQGHLLENEIECMVAGEVMQHYKRLQFEREVLLDPCRTWCPSSSCQAVCQ 121
Query: 147 IDDGGEAIRESV-CPDCNRMFCAQCKVPWHAGIRCAEFQKLHKDEREPEDIMLMTLAQKE 205
+++ + + V CP+C+ FC+ C+ H G C E + L + +
Sbjct: 122 LNEAEVQLPQPVQCPECSLRFCSACRADCHTGQACQEMLPITTFLPGENGSNLKSQEDEA 181
Query: 206 NWRRCPNCKIFVEKKEGCRYMRC 228
+RCP CK+++E+ EGC M C
Sbjct: 182 PIKRCPKCKVYIERDEGCAQMMC 204
>sp|A9JTG5|HOIL1_DANRE RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Danio
rerio GN=rbck1 PE=2 SV=1
Length = 714
Score = 67.8 bits (164), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 25/210 (11%)
Query: 33 NSKNEVTIEERIETSFICDICVEPKSTDESFSIKGCSHSYCTECMTKYVASKLQENITSI 92
+ ++ V ER+E C IC + E ++ C H +C EC+ + L +
Sbjct: 473 DGQDLVPNPERVE----CRICYVELESGEGVLLRECLHCFCKECLRSVI---LMSEDPQV 525
Query: 93 NCPVAD----CKGVLEPEYCRDILPEDVFNRW---GNALCEAVILGAQKFYCPFKDCSAL 145
CP D C VL+ R ++ D + W G ++ E+ G+ ++C DC
Sbjct: 526 ACPYRDESYACDCVLQEREIRALVSVDDYQHWLQRGLSVAESRCEGS--YHCATADCPGW 583
Query: 146 LIDDGGEAIRESVCPDCNRMFCAQCKVPWHAGIRCAEFQ------KLHKDEREPEDIMLM 199
+ + + + CP C + C CK H G+ C ++Q ++ +L
Sbjct: 584 CVYE--DTVNTFHCPVCKKQNCLLCKA-IHEGMNCKQYQDDLTARAINDSAARRTRDLLK 640
Query: 200 TLAQKENWRRCPNCKIFVEKKEGCRYMRCS 229
TL CP C I V+KKEGC ++RC+
Sbjct: 641 TLVNSGEAMHCPQCGIIVQKKEGCDWLRCT 670
>sp|Q9SKC3|ARI9_ARATH Probable E3 ubiquitin-protein ligase ARI9 OS=Arabidopsis thaliana
GN=ARI9 PE=2 SV=1
Length = 543
Score = 67.8 bits (164), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 81/187 (43%), Gaps = 13/187 (6%)
Query: 50 CDICVEPKSTDESFSIKGCSHSYCTECMTKYVASKLQEN--ITSINCPVADCKGVLEPEY 107
C IC E + +E + C H YC C Y+ +K+++ + CP C + +
Sbjct: 128 CGICFESYTREEIARV-SCGHPYCKTCWAGYITTKIEDGPGCLRVKCPEPSCSAAVGKDM 186
Query: 108 CRDILPEDVFNRWGNALCEAVILGAQKF-YCPFKDCSALLIDDGGEAIRESVCPDCNRMF 166
D+ V ++ + + + +K +CP C + G E+ V C+ F
Sbjct: 187 IEDVTETKVNEKYSRYILRSYVEDGKKIKWCPSPGCGYAVEFGGSESSSYDVSCLCSYRF 246
Query: 167 CAQCKVPWHAGIRCAEFQKL---HKDEREPEDIMLMTLAQKENWRRCPNCKIFVEKKEGC 223
C C H+ + C K ++DE E ++ ML N + CP CK +EK +GC
Sbjct: 247 CWNCSEDAHSPVDCDTVSKWIFKNQDESENKNWMLA------NSKPCPECKRPIEKNDGC 300
Query: 224 RYMRCSS 230
+M CS+
Sbjct: 301 NHMTCSA 307
>sp|P0CE10|Y4102_ARATH Putative uncharacterized protein At4g01020, chloroplastic
OS=Arabidopsis thaliana GN=At4g01020 PE=4 SV=1
Length = 1787
Score = 67.8 bits (164), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 89/188 (47%), Gaps = 10/188 (5%)
Query: 45 ETSFICDICVEPKSTDESFSIKGCSHSYCTECMT-KYVASKLQENITSINCPVADCKGVL 103
E C IC+ D+ +S++GCSH +C C+ ++ AS + I C DC +
Sbjct: 1556 EIELECPICL--SEVDDGYSLEGCSHLFCKACLLEQFEASMRNFDAFPILCSHIDCGAPI 1613
Query: 104 EPEYCRDILPEDVFNRWGNALCEAVILGA--QKFYCPFKDCSALLIDDGGEAIRES-VCP 160
R +L ++ + +A A + + + +C DC ++ G + E +C
Sbjct: 1614 VVADMRALLSQEKLDELISASLSAFVTSSDGKLRFCSTPDCPSIYRVAGPQESGEPFICG 1673
Query: 161 DCNRMFCAQCKVPWHAGIRCAEFQKLHKDEREPEDIMLMTLAQKENWRRCPNCKIFVEKK 220
C+ C +C + +H I C ++K +E D+ L A+ ++ + CP CK +EK
Sbjct: 1674 ACHSETCTRCHLEYHPLITCERYKKF----KENPDLSLKDWAKGKDVKECPICKSTIEKT 1729
Query: 221 EGCRYMRC 228
+GC +++C
Sbjct: 1730 DGCNHLQC 1737
>sp|Q8IWT3|CUL9_HUMAN Cullin-9 OS=Homo sapiens GN=CUL9 PE=1 SV=2
Length = 2517
Score = 67.0 bits (162), Expect = 1e-10, Method: Composition-based stats.
Identities = 48/192 (25%), Positives = 78/192 (40%), Gaps = 18/192 (9%)
Query: 50 CDICVEPKSTDESFSIKGCSHSYCTECMTKYVASKLQENIT-SINCPVADCKGVLEPEYC 108
C +CV P D+ C H C C +Y+ +++++N+ + CP+ADC +
Sbjct: 2070 CPVCVSPLGCDDDLPSLCCMHYCCKSCWNEYLTTRIEQNLVLNCTCPIADCPAQPTGAFI 2129
Query: 109 RDILPE-DVFNRWGNALCEAVILGAQKF-YCPF-KDCSALLIDDGGEAIRESVCPDCNRM 165
R I+ +V +++ AL + +C + C +L G + C C
Sbjct: 2130 RAIVSSPEVISKYEKALLRGYVESCSNLTWCTNPQGCDRILCRQGLGC--GTTCSKCGWA 2187
Query: 166 FCAQCKVP-WHAGIRCAEFQKLHKD-------EREPEDIMLMTLAQKENWRRCPNCKIFV 217
C C P H C + D E + L L K RCP+C+ +
Sbjct: 2188 SCFNCSFPEAHYPASCGHMSQWVDDGGYYDGMSVEAQSKHLAKLISK----RCPSCQAPI 2243
Query: 218 EKKEGCRYMRCS 229
EK EGC +M C+
Sbjct: 2244 EKNEGCLHMTCA 2255
>sp|Q5RFV4|R1441_DANRE Probable E3 ubiquitin-protein ligase RNF144A-A OS=Danio rerio
GN=rnf144aa PE=3 SV=1
Length = 293
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 6/203 (2%)
Query: 32 SNSKNEVTIEERIETSFICDICVEPKSTDESFSIKGCSHSYCTECMTKYVASKLQENI-T 90
+ ++ T + ++ C +C+ ++ +I C +CT C+ +YV ++E T
Sbjct: 2 TTARYRPTWDLALDPLVSCKLCLGEFPLEQMTTITQCQCVFCTMCLKQYVELLIKEGFET 61
Query: 91 SINCPVADC--KGVLEPEYCRDILPEDVFNRWGNALCEA-VILGAQKFYCPFKDCSALLI 147
+I+CP + C +G L+ ++ ++ R+ E V+L + +CP C A+
Sbjct: 62 AISCPDSACPKRGHLQENEIECMVATEIMQRYRKLQFEKEVLLDPSRTWCPSSTCQAVCQ 121
Query: 148 DDGGEAIRESV--CPDCNRMFCAQCKVPWHAGIRCAEFQKLHKDEREPEDIMLMTLAQKE 205
+ + + C C FC+ CK WH C E +
Sbjct: 122 LKESDTVLPQLVRCSVCTLEFCSACKASWHPDQDCQENVPITSFLPGESSSFFKADDDDA 181
Query: 206 NWRRCPNCKIFVEKKEGCRYMRC 228
+RCP CK+++E+ EGC M C
Sbjct: 182 PIKRCPKCKVYIERDEGCAQMMC 204
>sp|Q9BYM8|HOIL1_HUMAN RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Homo
sapiens GN=RBCK1 PE=1 SV=2
Length = 510
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 86/194 (44%), Gaps = 23/194 (11%)
Query: 50 CDICVEPKSTDESFSIKGCSHSYCTECMTKYVASKLQENITSINCPVAD----CKG-VLE 104
C +C + E+ ++ C H++C EC+ + + + ++CP D C G +LE
Sbjct: 282 CPVCYSVLAPGEAVVLRECLHTFCRECLQGTIRNSQE---AEVSCPFIDNTYSCSGKLLE 338
Query: 105 PEYCRDILPEDVFNRWGNALCEAVILGAQKFYCPFKDCSA--LLIDDGGEAIRESVCPDC 162
E + PED + A A ++C DC DD + E CP C
Sbjct: 339 REIKALLTPEDYQRFLDLGISIAENRSAFSYHCKTPDCKGWCFFEDD----VNEFTCPVC 394
Query: 163 NRMFCAQCKVPWHAGIRCAEFQKLHKDEREPEDI-------MLMTLAQKENWRRCPNCKI 215
+ C CK H + C E+Q+ R D+ ML + Q+ RCP C+I
Sbjct: 395 FHVNCLLCKA-IHEQMNCKEYQE-DLALRAQNDVAARQTTEMLKVMLQQGEAMRCPQCQI 452
Query: 216 FVEKKEGCRYMRCS 229
V+KK+GC ++RC+
Sbjct: 453 VVQKKDGCDWIRCT 466
>sp|Q62921|HOIL1_RAT RanBP-type and C3HC4-type zinc finger-containing protein 1
OS=Rattus norvegicus GN=Rbck1 PE=1 SV=3
Length = 508
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 83/194 (42%), Gaps = 23/194 (11%)
Query: 50 CDICVEPKSTDESFSIKGCSHSYCTECMTKYVASKLQENITSINCPVAD----CKGVLEP 105
C +C + E+ ++ C H++C EC+ + + + ++CP D C G L
Sbjct: 280 CPVCYSVLAPGEAVVLRECLHTFCRECLQGTIRNSQE---AEVSCPFIDNTYSCPGKLLE 336
Query: 106 EYCRDIL-PEDVFNRWGNALCEAVILGAQKFYCPFKDCSA--LLIDDGGEAIRESVCPDC 162
R +L PED + A ++C DC DD + E CP C
Sbjct: 337 REIRALLSPEDYQRFLDLGVSIAENRSTLSYHCKTPDCRGWCFFEDD----VNEFTCPVC 392
Query: 163 NRMFCAQCKVPWHAGIRCAEFQKLHKDEREPEDI-------MLMTLAQKENWRRCPNCKI 215
R+ C CK H + C E+Q R D+ ML + Q+ CP C+I
Sbjct: 393 TRVNCLLCKA-IHERMNCREYQD-DLAHRARNDVAAQQTTEMLRVMLQQGEAMYCPQCRI 450
Query: 216 FVEKKEGCRYMRCS 229
V+KK+GC ++RC+
Sbjct: 451 VVQKKDGCDWIRCT 464
>sp|P36113|YKZ7_YEAST RING finger protein YKR017C OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YKR017C PE=1 SV=1
Length = 551
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 91/217 (41%), Gaps = 18/217 (8%)
Query: 24 SVTEKGQCSNSKNEVTIEERIETSFICDICVEPKSTDESFSIKGCSHSYCTECMTKYVAS 83
S T + N N E + F C IC + K T E+F+++ C H YC C Y+
Sbjct: 153 STTANIKKDNDYNSHFREVEFKNDFTCIICCDKKDT-ETFALE-CGHEYCINCYRHYIKD 210
Query: 84 KLQENITSINCPVADCKGVLEPEYCRDILPEDVFNRWGNALCEAVILGAQKFY--CPFKD 141
KL E I C DC L+ E ++ ++ ++ ++ + + Y CPF D
Sbjct: 211 KLHEG-NIITC--MDCSLALKNEDIDKVMGHPSSSKLMDSSIKSFVQKHNRNYKWCPFAD 267
Query: 142 CSAL--LIDDGG--EAIRESVCP--DCNRM--FCAQCKVPWHAGIRCAEFQKLHKDEREP 193
C ++ L D E R P CN FC C H+ C K R+
Sbjct: 268 CKSIVHLRDTSSLPEYTRLHYSPFVKCNSFHRFCFNCGFEVHSPADCKITTAWVKKARKE 327
Query: 194 EDIMLMTLAQKENWRRCPNCKIFVEKKEGCRYMRCSS 230
+I+ L+ + CP C + +EK GC +M CSS
Sbjct: 328 SEILNWVLSHT---KECPKCSVNIEKNGGCNHMVCSS 361
>sp|Q9WUB0|HOIL1_MOUSE RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Mus
musculus GN=Rbck1 PE=1 SV=2
Length = 508
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 82/194 (42%), Gaps = 23/194 (11%)
Query: 50 CDICVEPKSTDESFSIKGCSHSYCTECMTKYVASKLQENITSINCPVAD----CKGVLEP 105
C +C + E+ ++ C H++C EC+ + + + + CP D C G L
Sbjct: 280 CPVCYSVLAPGEAVVLRECLHTFCRECLQGTIRNSQEAEVA---CPFIDSTYSCPGKLLE 336
Query: 106 EYCRDIL-PEDVFNRWGNALCEAVILGAQKFYCPFKDCSA--LLIDDGGEAIRESVCPDC 162
R +L PED + A ++C DC DD + E CP C
Sbjct: 337 REIRALLSPEDYQRFLDLGVSIAENRSTLSYHCKTPDCRGWCFFEDD----VNEFTCPVC 392
Query: 163 NRMFCAQCKVPWHAGIRCAEFQKLHKDEREPEDI-------MLMTLAQKENWRRCPNCKI 215
R+ C CK H + C E+Q R D+ ML + Q+ CP C+I
Sbjct: 393 TRVNCLLCKA-IHEHMNCREYQD-DLALRAQNDVAARQTTEMLKVMLQQGEAMHCPQCRI 450
Query: 216 FVEKKEGCRYMRCS 229
V+KK+GC ++RC+
Sbjct: 451 VVQKKDGCDWIRCT 464
>sp|E6ZIJ1|HOIL1_DICLA RanBP-type and C3HC4-type zinc finger-containing protein 1
OS=Dicentrarchus labrax GN=rbck1 PE=3 SV=1
Length = 707
Score = 64.7 bits (156), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 21/193 (10%)
Query: 50 CDICVEPKSTDESFSIKGCSHSYCTECMTKYVASKLQENITSINCPVAD----CKGVLEP 105
C IC E ++ C H +C EC+ + L E ++CP D C L+
Sbjct: 479 CRICYMDLQPGEGVLLRECLHCFCRECLRSVIM--LSEE-PEVSCPYRDDTYSCACSLQE 535
Query: 106 EYCRDILPEDVFNRW---GNALCEAVILGAQKFYCPFKDCSALLIDDGGEAIRESVCPDC 162
R ++P + + RW G ++ E+ G+ ++C DC + + + + CP C
Sbjct: 536 REIRALVPAEEYERWLQRGLSVAESRCEGS--YHCATPDCLGWCVYE--DTVNVFHCPVC 591
Query: 163 NRMFCAQCKVPWHAGIRCAEFQ------KLHKDEREPEDIMLMTLAQKENWRRCPNCKIF 216
+ C CK H G+ C ++Q ++ +L TL Q CP C I
Sbjct: 592 RKHNCLICKS-IHEGMNCKQYQDDLAARAINDSAARRTTQLLKTLVQSGEAMHCPQCGII 650
Query: 217 VEKKEGCRYMRCS 229
V+K++GC ++RC+
Sbjct: 651 VQKRDGCDWLRCT 663
>sp|Q6T486|RBRA_DICDI Probable E3 ubiquitin-protein ligase rbrA OS=Dictyostelium
discoideum GN=rbrA PE=3 SV=1
Length = 520
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 88/189 (46%), Gaps = 13/189 (6%)
Query: 50 CDICVEPKSTDESFSIKGCSHSYCTECMTKYVASKLQENITSIN--CPVADCKGVLEPEY 107
C IC+E ++F++ C+H YC C Y+ K+ E I CP CK ++ +
Sbjct: 139 CLICLEDYPPTQTFALI-CNHRYCLPCYKNYLEIKVSEGPECIYTPCPAPKCKVIVHQDA 197
Query: 108 CRDILPEDVFNRWGNALCEAVIL-GAQKFYCPFKDCSALLIDDGGEAIRESVCPDCNRMF 166
+ I+ +VF R+ N + ++ + Q +CP C + D E +E+V C +
Sbjct: 198 FKQIVSPEVFERFNNFILKSYVDDNPQVKWCPAPGCIYSIRCDRKER-KEAVNCKCGFQY 256
Query: 167 CAQC---KVPWHAGIRCAEFQK-LHKDEREPEDIMLMTLAQKENWRRCPNCKIFVEKKEG 222
C C ++ H C++ K L K E E++ M N ++CP C+ +EK G
Sbjct: 257 CFNCNDYEIGDHMPCPCSQVDKWLQKASDESENVTWMLA----NTKKCPECRSPIEKNGG 312
Query: 223 CRYMRCSSN 231
C +M C N
Sbjct: 313 CMHMTCRKN 321
>sp|Q9SKC4|ARI10_ARATH Probable E3 ubiquitin-protein ligase ARI10 OS=Arabidopsis thaliana
GN=ARI10 PE=2 SV=1
Length = 514
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 85/193 (44%), Gaps = 15/193 (7%)
Query: 45 ETSFICDICVEPKSTDESFSIKGCSHSYCTECMTKYVASKLQEN--ITSINCPVADCKGV 102
E C IC E + E S+ C H YC C T Y+ +K+++ + CP C V
Sbjct: 116 EVDIQCGICFESYTRKEIASV-SCGHPYCKTCWTGYITTKIEDGPGCLRVKCPEPSCYAV 174
Query: 103 LEPEYCRDILPEDVFNRWGNALCEAVILGAQKF-YCPFKDCSALLIDDGGEAIRESVCPD 161
+ + ++ + +++ + + +K +CP C + + GE+ V
Sbjct: 175 VGQDMIDEVTEKKDKDKYYRYFLRSYVEDGKKMKWCPSPGCECAV--EFGESSGYDVACL 232
Query: 162 CNRMFCAQCKVPWHAGIRCAEFQKL---HKDEREPEDIMLMTLAQKENWRRCPNCKIFVE 218
C+ FC C H+ + C K ++DE E ++ +L N + CP CK +E
Sbjct: 233 CSYRFCWNCSEDAHSPVDCETVSKWIFKNQDESENKNWILA------NSKPCPKCKRPIE 286
Query: 219 KKEGCRYMRCSSN 231
K GC +M CS++
Sbjct: 287 KSHGCNHMTCSAS 299
>sp|Q8TC41|RN217_HUMAN Probable E3 ubiquitin-protein ligase RNF217 OS=Homo sapiens
GN=RNF217 PE=2 SV=3
Length = 275
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 63/152 (41%), Gaps = 9/152 (5%)
Query: 84 KLQENITSINCPVADCKGVLEPEYC------RDILPEDVFNRWGNALCEAVILGAQKFYC 137
K+Q I CP+ +C LE D + F G K +
Sbjct: 2 KVQLGQVEIKCPITECFEFLEETTVVYNLTHEDSIKYKYFLELGRIDSSTKPCPQCKHFT 61
Query: 138 PFKDCSALLIDDGGEAIRESVCPDCNRMFCAQCKVPWHAGIRCAEFQKLHKDEREPEDIM 197
FK + E+ + CP C ++C +C PWH G+ C E++K K R +
Sbjct: 62 TFKKKGHIPTPSRSESKYKIQCPTCQFVWCFKCHSPWHEGVNCKEYKKGDKLLRHWASEI 121
Query: 198 LMTLAQKENWRRCPNCKIFVEKKEGCRYMRCS 229
+ N ++CP CKI +++ EGC +M CS
Sbjct: 122 EHG---QRNAQKCPKCKIHIQRTEGCDHMTCS 150
>sp|O76924|ARI2_DROME Protein ariadne-2 OS=Drosophila melanogaster GN=ari-2 PE=2 SV=1
Length = 509
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 88/186 (47%), Gaps = 10/186 (5%)
Query: 47 SFICDICVEPKSTDESFSIKGCSHSYCTECMTKYVASKLQENI-TSINCPVADCKGVLEP 105
S +C +C + D+ +S+ C HS+C +C T Y +++ + I T I C C +
Sbjct: 150 SQMCPVCASSQLGDKFYSL-ACGHSFCKDCWTIYFETQIFQGISTQIGCMAQMCNVRVPE 208
Query: 106 EYCRDILPEDVF-NRWGN-ALCEAVILGAQKFYCPFKDCSALLIDDGGEAIRESVCPDCN 163
+ ++ V +++ A + V + +CP +C +++ + + ++C C+
Sbjct: 209 DLVLTLVTRPVMRDKYQQFAFKDYVKSHPELRFCPGPNCQ-IIVQSSEISAKRAICKACH 267
Query: 164 RMFCAQCKVPWHAGIRCAEFQK-LHKDEREPEDIMLMTLAQKENWRRCPNCKIFVEKKEG 222
FC +C + +HA C +K L K + E ++ K+ CP C I +EK G
Sbjct: 268 TGFCFRCGMDYHAPTDCQVIKKWLTKCADDSETANYISAHTKD----CPKCHICIEKNGG 323
Query: 223 CRYMRC 228
C +M+C
Sbjct: 324 CNHMQC 329
>sp|Q54CX4|Y5521_DICDI Uncharacterized protein DDB_G0292642 OS=Dictyostelium discoideum
GN=DDB_G0292642 PE=4 SV=2
Length = 903
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 92/224 (41%), Gaps = 14/224 (6%)
Query: 13 FGKAKKPFSSRSVTEKGQCSNSKNEVTIEERIETSFICDIC-VEPKSTDESFSIKGCSHS 71
FG KK +K K +EE +E C IC +E ++E F+++ C H
Sbjct: 583 FGIEKKVLRQYIKLKKEMEDRKKVSTKLEEPVE----CKICYMEYDQSNEVFTLE-CDHV 637
Query: 72 YCTECMTKYVASKLQEN-ITSINCPVADCKGVLEPEYCRDILPEDVFNRWGNALCEAVIL 130
YC +C+T+++ + E + I+CP CK ++ + E + ++ A +
Sbjct: 638 YCFDCITEHLRILITEGRVLDISCPHPQCKKEIKESEIYMLTNEKNWLKYQKFSMIASLK 697
Query: 131 GAQKFYCPFKDCSALLIDDGGEAIRESVCPDCNRMFCAQCKVPWHAGIRCA----EFQKL 186
+CP DC + G E CP C+ FC C H G +C E Q
Sbjct: 698 TEPIKWCPTPDCDTP-VRGGSERNPILNCPKCSNDFCWICGEYSHEGAKCGTEAMELQGR 756
Query: 187 HKDEREPEDIMLMTL--AQKENWRRCPNCKIFVEKKEGCRYMRC 228
E + + K + CP CK +EK +GC +M C
Sbjct: 757 KNKSIESAATAYIDFLESNKHFVKPCPTCKSHIEKHDGCNHMTC 800
>sp|Q9LVX0|ARI3_ARATH Probable E3 ubiquitin-protein ligase ARI3 OS=Arabidopsis thaliana
GN=ARI3 PE=2 SV=1
Length = 537
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 83/185 (44%), Gaps = 12/185 (6%)
Query: 50 CDICVEPKSTDESFSIKGCSHSYCTECMTKYVASKLQENITS-INCPVADCKGVLEPEYC 108
CD+C+E + C H +C +C + K+ E + I C +CK + + +
Sbjct: 121 CDVCMEDDLPSNVMTRMECGHRFCNDCWIGHFTVKINEGESKRILCMAHECKAICDEDVV 180
Query: 109 RDILPEDVFNRWGNALCEAVILGAQKF-YCPFK-DCSALL--IDDGGEAIRESVCPDCNR 164
R ++ ++ +R+ L E+ + +CP K C + + I+DG + + V C
Sbjct: 181 RKLVSPELADRYDRFLIESYVEDNNMVKWCPSKPHCGSAIRKIEDGHDVV--EVGCSCGL 238
Query: 165 MFCAQCKVPWHAGIRCAEFQKLHKD-EREPEDIMLMTLAQKENWRRCPNCKIFVEKKEGC 223
FC C H+ C ++ K E E E + +T+ N + CP C ++K++GC
Sbjct: 239 QFCFSCLSESHSPCSCLMWKLWKKKCEDESETVNWITV----NTKLCPKCSKPIQKRDGC 294
Query: 224 RYMRC 228
M C
Sbjct: 295 NLMTC 299
>sp|O95376|ARI2_HUMAN E3 ubiquitin-protein ligase ARIH2 OS=Homo sapiens GN=ARIH2 PE=1
SV=1
Length = 493
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 10/184 (5%)
Query: 50 CDICVEPKSTDESFSIKGCSHSYCTECMTKYVASKLQENI-TSINCPVADCKGVLEPEYC 108
C +C++ + S+ C H +C C ++ + +++ + ++C DC ++
Sbjct: 139 CAVCMQFVRKENLLSL-ACQHQFCRSCWEQHCSVLVKDGVGVGVSCMAQDCPLRTPEDFV 197
Query: 109 RDILP-EDVFNRWGNALCEAVILGAQKF-YCPFKDCSALLIDDGGEAIRESVCPDCNRMF 166
+LP E++ ++ L + + CP DC ++I R C CN +F
Sbjct: 198 FPLLPNEELREKYRRYLFRDYVESHYQLQLCPGADC-PMVIRVQEPRARRVQCNRCNEVF 256
Query: 167 CAQCKVPWHAGIRCAEFQK-LHKDEREPEDIMLMTLAQKENWRRCPNCKIFVEKKEGCRY 225
C +C+ +HA CA +K L K + E ++ K+ CP C I +EK GC +
Sbjct: 257 CFKCRQMYHAPTDCATIRKWLTKCADDSETANYISAHTKD----CPKCNICIEKNGGCNH 312
Query: 226 MRCS 229
M+CS
Sbjct: 313 MQCS 316
>sp|Q924T7|RNF31_MOUSE E3 ubiquitin-protein ligase RNF31 OS=Mus musculus GN=Rnf31 PE=1
SV=2
Length = 1066
Score = 57.0 bits (136), Expect = 1e-07, Method: Composition-based stats.
Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 21/197 (10%)
Query: 50 CDICVEPKSTDESFSIKGCSHSYCTECMTKYVASKLQE-NITSINCPVADCKGVLEPEYC 108
C +C + ++ C + C EC ++ L+E +IT + CP + +
Sbjct: 693 CAVCGWALPRNRMQALISCECTICPECFRQHFTIALKEKHITDMVCPACGRPDLTDDAQL 752
Query: 109 -----------RDILPEDVFNRWGNALCEAVILGAQKF-YCPFKDCSALLIDDGGEAIRE 156
R+ L D + + L EAV++ KF +C CS I + + E
Sbjct: 753 LSYFSTLDIQLRESLDPDAYALFHKKLTEAVLMRDPKFLWC--AQCSFGFIYEREQL--E 808
Query: 157 SVCPDCNRMFCAQCKVPW---HAGIRCAEFQKLHKDEREPEDIMLMTLAQKENWRRCPNC 213
+ CP C++ FC +CK W H G C +FQ + + + +EN CP C
Sbjct: 809 ATCPQCHQTFCVRCKRQWEEQHRGRSCEDFQNWKRTNDPEYQAQGLAMYLQENGIDCPKC 868
Query: 214 KI-FVEKKEGCRYMRCS 229
K + + GC + C+
Sbjct: 869 KFSYALARGGCMHFHCT 885
>sp|Q9SKC2|ARI11_ARATH Probable E3 ubiquitin-protein ligase ARI11 OS=Arabidopsis thaliana
GN=ARI11 PE=2 SV=1
Length = 542
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 80/190 (42%), Gaps = 9/190 (4%)
Query: 45 ETSFICDICVEPKSTDESFSIKGCSHSYCTECMTKYVASKLQEN--ITSINCPVADCKGV 102
E C IC E + E + C H YC C T Y+ +K+++ + CP C V
Sbjct: 134 EVDIQCGICFESYTRKEIARV-SCGHPYCKTCWTGYITTKIEDGPGCLRVKCPEPSCYAV 192
Query: 103 LEPEYCRDILPEDVFNRWGNALCEAVILGAQKF-YCPFKDCS-ALLIDDGGEAIRESVCP 160
+ + ++ + +++ + + +K +CP C A+ G + + C
Sbjct: 193 VGQDMIDEVTEKKDKDKYYRYFLRSYVEDGKKMKWCPSPGCEYAVEFGVNGSSSYDVSCL 252
Query: 161 DCNRMFCAQCKVPWHAGIRCAEFQKLHKDEREPEDIMLMTLAQKENWRRCPNCKIFVEKK 220
C+ FC C H+ + C K ++ + M LA+ + CP CK +EK
Sbjct: 253 -CSYKFCWNCCEDAHSPVDCETVSKWLLKNKDESENMNWILAKT---KPCPKCKRPIEKN 308
Query: 221 EGCRYMRCSS 230
GC +M CS+
Sbjct: 309 TGCNHMSCSA 318
>sp|Q9Z1K6|ARI2_MOUSE E3 ubiquitin-protein ligase ARIH2 OS=Mus musculus GN=Arih2 PE=2
SV=1
Length = 492
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 10/184 (5%)
Query: 50 CDICVEPKSTDESFSIKGCSHSYCTECMTKYVASKLQENI-TSINCPVADCKGVLEPEYC 108
C +C++ + S+ C H +C C ++ + +++ + I+C DC ++
Sbjct: 138 CAVCMQFVRKENLLSL-ACQHQFCRSCWEQHCSVLVKDGVGVGISCMAQDCPLRTPEDFV 196
Query: 109 RDILP-EDVFNRWGNALCEAVILGA-QKFYCPFKDCSALLIDDGGEAIRESVCPDCNRMF 166
+LP E++ +++ L + Q CP DC ++I R C C+ +F
Sbjct: 197 FPLLPNEELRDKYRRYLFRDYVESHFQLQLCPGADC-PMVIRVQEPRARRVQCNRCSEVF 255
Query: 167 CAQCKVPWHAGIRCAEFQK-LHKDEREPEDIMLMTLAQKENWRRCPNCKIFVEKKEGCRY 225
C +C+ +HA CA +K L K + E ++ K+ CP C I +EK GC +
Sbjct: 256 CFKCRQMYHAPTDCATIRKWLTKCADDSETANYISAHTKD----CPKCNICIEKNGGCNH 311
Query: 226 MRCS 229
M+CS
Sbjct: 312 MQCS 315
>sp|Q9P3U4|YKX2_SCHPO Uncharacterized RING finger protein C328.02 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC328.02 PE=3 SV=1
Length = 504
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 68/167 (40%), Gaps = 10/167 (5%)
Query: 68 CSHSYCTECMTKYVASKLQENITSINCPVADCKGVLEPEYCRDILPEDVFNRWGNALCEA 127
C H +C C +Y+ S++ E + I CP C ++ + +L E +R+ L +
Sbjct: 147 CDHEFCLACYRQYLDSRISEGESVIQCPEESCTQIVSIQSITKVLDEKSLDRYHRLLDRS 206
Query: 128 VILGAQKF-YCPFKDCSALLIDDGGEAIRESVCP----DCNRMFCAQCKVPWHAGIRCAE 182
+ +CP DC + +A SV P +C + FC C H C
Sbjct: 207 FVDDNDHLRWCPAPDCEFAIECHVTQASLSSVVPTVTCNCGKQFCFGCGHDNHQPTICPL 266
Query: 183 FQ-KLHKDEREPEDIMLMTLAQKENWRRCPNCKIFVEKKEGCRYMRC 228
+ L K + + E + KE CP C +EK GC +M C
Sbjct: 267 VKIWLQKCQDDSETANWIHANTKE----CPKCSTTIEKNGGCNHMTC 309
>sp|P50636|RN19A_MOUSE E3 ubiquitin-protein ligase RNF19A OS=Mus musculus GN=Rnf19a PE=1
SV=2
Length = 840
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 91/230 (39%), Gaps = 36/230 (15%)
Query: 20 FSSRSVTEKGQCSNSKNEVTIEERIETSFICDICVEPKSTDESFSIKGCSHSYCTECMTK 79
FS+ + ++ G S SK I + IE C +C+ S D I C H C +C+ +
Sbjct: 109 FSTNTSSDNGLTSISKQ---IGDFIE----CPLCLLRHSKDRFPDIMTCHHRSCVDCLRQ 161
Query: 80 YVASKLQENITSINCPVADCKGVLEPEYCRDILPEDV---------FNRWGNALCEAVIL 130
Y+ ++ E+ +I+CP +C P R IL +DV RW ++
Sbjct: 162 YLRIEISESRVNISCP--ECTERFNPHDIRLILSDDVLMEKYEEFMLRRW-------LVA 212
Query: 131 GAQKFYCPFKDCSALLIDDGGEAIRESVCP--DCNRMFCAQCKVPWHAGIRC-------A 181
+CP DC +I G + + C C FC CK WH C A
Sbjct: 213 DPDCRWCPAPDCGYAVIAFGCASCPKLTCGREGCGTEFCYHCKQIWHPNQTCDAARQERA 272
Query: 182 EFQKLHKDEREPEDIMLMTLAQKENWRRCPNCKIFVEKKE--GCRYMRCS 229
+ +L + A ++ + CP C ++ K C +M C+
Sbjct: 273 QSLRLRTIRSSSISYSQESGAAADDIKPCPRCAAYIIKMNDGSCNHMTCA 322
>sp|Q84RR0|ARI7_ARATH Probable E3 ubiquitin-protein ligase ARI7 OS=Arabidopsis thaliana
GN=ARI7 PE=2 SV=1
Length = 562
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 81/189 (42%), Gaps = 10/189 (5%)
Query: 45 ETSFICDICVEPKSTDESFSIKGCSHSYCTECMTKYVASKLQEN--ITSINCPVADCKGV 102
++ C IC + ++ S+ C H +CT C T Y+++ + + + CP C
Sbjct: 132 DSELTCGICFDSYPPEKIASVS-CGHPFCTTCWTGYISTTINDGPGCLMLRCPDPSCLAA 190
Query: 103 LEPEYCRDILPEDVFNRWGNALCEAVILGAQKF-YCPFKDCSALLIDDGGEAIRESVCPD 161
+ + + ED ++ + I +K +CP C + G + C
Sbjct: 191 VGHDMVDKLASEDEKEKYNRYFLRSYIEDNRKMKWCPAPGCDFAIDFVAGSGNYDVSCL- 249
Query: 162 CNRMFCAQCKVPWHAGIRCAEFQK-LHKDEREPEDIMLMTLAQKENWRRCPNCKIFVEKK 220
C+ FC C H + C+ K + K+ E E+ M LA N + CP CK +EK
Sbjct: 250 CSFSFCWNCTEEAHRPVDCSTVSKWILKNSAESEN-MNWILA---NSKPCPRCKRPIEKN 305
Query: 221 EGCRYMRCS 229
+GC +M C+
Sbjct: 306 QGCMHMTCT 314
>sp|Q2VJ60|RN19A_PIG E3 ubiquitin-protein ligase RNF19A OS=Sus scrofa GN=RNF19A PE=2
SV=1
Length = 838
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 91/230 (39%), Gaps = 36/230 (15%)
Query: 20 FSSRSVTEKGQCSNSKNEVTIEERIETSFICDICVEPKSTDESFSIKGCSHSYCTECMTK 79
FS+ + ++ G S SK I + IE C +C+ S D I C H C +C+ +
Sbjct: 109 FSTNTSSDNGLTSISKQ---IGDFIE----CPLCLLRHSKDRFPEIMTCHHRSCVDCLRQ 161
Query: 80 YVASKLQENITSINCPVADCKGVLEPEYCRDILPEDV---------FNRWGNALCEAVIL 130
Y+ ++ E+ +I+CP +C P R IL +DV RW ++
Sbjct: 162 YLRIEISESRVNISCP--ECTERFNPHDIRLILSDDVLMEKYEEFMLRRW-------LVA 212
Query: 131 GAQKFYCPFKDCSALLIDDGGEAIRESVCP--DCNRMFCAQCKVPWHAGIRC-------A 181
+CP DC +I G + + C C FC CK WH C A
Sbjct: 213 DPDCRWCPAPDCGYAVIAFGCASCPKLTCGREGCGTEFCYHCKQIWHPNQTCDAARQERA 272
Query: 182 EFQKLHKDEREPEDIMLMTLAQKENWRRCPNCKIFVEKKE--GCRYMRCS 229
+ +L + A ++ + CP C ++ K C +M C+
Sbjct: 273 QSLRLRTIRSSSISYSQESGAAADDIKPCPRCAAYIIKMNDGSCNHMTCA 322
>sp|Q9NV58|RN19A_HUMAN E3 ubiquitin-protein ligase RNF19A OS=Homo sapiens GN=RNF19A PE=1
SV=3
Length = 838
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 91/230 (39%), Gaps = 36/230 (15%)
Query: 20 FSSRSVTEKGQCSNSKNEVTIEERIETSFICDICVEPKSTDESFSIKGCSHSYCTECMTK 79
FS+ + ++ G S SK I + IE C +C+ S D I C H C +C+ +
Sbjct: 109 FSTNTSSDNGLTSISKQ---IGDFIE----CPLCLLRHSKDRFPDIMTCHHRSCVDCLRQ 161
Query: 80 YVASKLQENITSINCPVADCKGVLEPEYCRDILPEDV---------FNRWGNALCEAVIL 130
Y+ ++ E+ +I+CP +C P R IL +DV RW ++
Sbjct: 162 YLRIEISESRVNISCP--ECTERFNPHDIRLILSDDVLMEKYEEFMLRRW-------LVA 212
Query: 131 GAQKFYCPFKDCSALLIDDGGEAIRESVCP--DCNRMFCAQCKVPWHAGIRC-------A 181
+CP DC +I G + + C C FC CK WH C A
Sbjct: 213 DPDCRWCPAPDCGYAVIAFGCASCPKLTCGREGCGTEFCYHCKQIWHPNQTCDAARQERA 272
Query: 182 EFQKLHKDEREPEDIMLMTLAQKENWRRCPNCKIFVEKKE--GCRYMRCS 229
+ +L + A ++ + CP C ++ K C +M C+
Sbjct: 273 QSLRLRTIRSSSISYSQESGAAADDIKPCPRCAAYIIKMNDGSCNHMTCA 322
>sp|Q96EP0|RNF31_HUMAN E3 ubiquitin-protein ligase RNF31 OS=Homo sapiens GN=RNF31 PE=1
SV=1
Length = 1072
Score = 54.7 bits (130), Expect = 6e-07, Method: Composition-based stats.
Identities = 46/197 (23%), Positives = 80/197 (40%), Gaps = 21/197 (10%)
Query: 50 CDICVEPKSTDESFSIKGCSHSYCTECMTKYVASKLQE-NITSINCPVADCKGVLEPEYC 108
C +C + ++ C + C +C ++ L+E +IT + CP + +
Sbjct: 699 CAVCGWALPHNRMQALTSCECTICPDCFRQHFTIALKEKHITDMVCPACGRPDLTDDTQL 758
Query: 109 -----------RDILPEDVFNRWGNALCEAVILGAQKF-YCPFKDCSALLIDDGGEAIRE 156
R+ L D + + L E V++ KF +C CS I + + E
Sbjct: 759 LSYFSTLDIQLRESLEPDAYALFHKKLTEGVLMRDPKFLWC--AQCSFGFIYEREQL--E 814
Query: 157 SVCPDCNRMFCAQCKVPW---HAGIRCAEFQKLHKDEREPEDIMLMTLAQKENWRRCPNC 213
+ CP C++ FC +CK W H G C +FQ + + + +EN CP C
Sbjct: 815 ATCPQCHQTFCVRCKRQWEEQHRGRSCEDFQNWKRMNDPEYQAQGLAMYLQENGIDCPKC 874
Query: 214 KI-FVEKKEGCRYMRCS 229
K + + GC + C+
Sbjct: 875 KFSYALARGGCMHFHCT 891
>sp|Q9Z1K5|ARI1_MOUSE E3 ubiquitin-protein ligase ARIH1 OS=Mus musculus GN=Arih1 PE=2
SV=3
Length = 555
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 79/188 (42%), Gaps = 16/188 (8%)
Query: 50 CDICVEPKSTDESFSIKGCSHSYCTECMTKYVASKLQENIT--SINCPVADCKGVLEPEY 107
C IC + F+ C H +C +C ++Y+ +K+ E +I+CP C +++
Sbjct: 184 CQICY-LNYPNSYFTGLECGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDDNT 242
Query: 108 CRDILPEDVFNRWGNALCEAVILGAQKF--YCPFKDCSALLIDDGGEAIRESVCPDCNRM 165
++ + L + + +CP DC ++ +A + V C R
Sbjct: 243 VMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQYPDA--KPVRCKCGRQ 300
Query: 166 FCAQCKVPWHAGIRCAEFQKLHK---DEREPEDIMLMTLAQKENWRRCPNCKIFVEKKEG 222
FC C WH ++C +K K D+ E + + N + CP C + +EK G
Sbjct: 301 FCFNCGENWHDPVKCKWLKKWIKKCDDDSETSNWIAA------NTKECPKCHVTIEKDGG 354
Query: 223 CRYMRCSS 230
C +M C +
Sbjct: 355 CNHMVCRN 362
>sp|A2VEA3|ARI1_BOVIN E3 ubiquitin-protein ligase ARIH1 OS=Bos taurus GN=ARIH1 PE=2 SV=1
Length = 555
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 79/188 (42%), Gaps = 16/188 (8%)
Query: 50 CDICVEPKSTDESFSIKGCSHSYCTECMTKYVASKLQENIT--SINCPVADCKGVLEPEY 107
C IC + F+ C H +C +C ++Y+ +K+ E +I+CP C +++
Sbjct: 184 CQICY-LNYPNSYFTGLECGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDDNT 242
Query: 108 CRDILPEDVFNRWGNALCEAVILGAQKF--YCPFKDCSALLIDDGGEAIRESVCPDCNRM 165
++ + L + + +CP DC ++ +A + V C R
Sbjct: 243 VMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQYPDA--KPVRCKCGRQ 300
Query: 166 FCAQCKVPWHAGIRCAEFQKLHK---DEREPEDIMLMTLAQKENWRRCPNCKIFVEKKEG 222
FC C WH ++C +K K D+ E + + N + CP C + +EK G
Sbjct: 301 FCFNCGENWHDPVKCKWLKKWIKKCDDDSETSNWIAA------NTKECPKCHVTIEKDGG 354
Query: 223 CRYMRCSS 230
C +M C +
Sbjct: 355 CNHMVCRN 362
>sp|Q8L829|ARI5_ARATH Probable E3 ubiquitin-protein ligase ARI5 OS=Arabidopsis thaliana
GN=ARI5 PE=2 SV=1
Length = 552
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 80/190 (42%), Gaps = 18/190 (9%)
Query: 48 FICDICVEPKSTDESFSIKGCSHSYCTECMTKYVASKLQENIT--SINCPVADCKGVLEP 105
F C IC + + +E S+ C H +C C T Y+++ + + + CP C +
Sbjct: 130 FTCGICFDSYTLEEIVSVS-CGHPFCATCWTGYISTTINDGPGCLMLKCPDPSCPAAI-- 186
Query: 106 EYCRDIL-----PEDVFNRWGNALCEAVILGAQKFYCPFKDCSALLIDDGGEAIRESVCP 160
RD++ ED + L V + + +CP C + GG + C
Sbjct: 187 --GRDMIDKLASKEDKEKYYRYFLRSYVEVNREMKWCPAPGCEHAIDFAGGTESYDVSCL 244
Query: 161 DCNRMFCAQCKVPWHAGIRCAEFQK-LHKDEREPEDIMLMTLAQKENWRRCPNCKIFVEK 219
C+ FC C H + C K + K+ E E+ M LA N + CP CK +EK
Sbjct: 245 -CSHSFCWNCTEEAHRPVDCDTVGKWILKNSAESEN-MNWILA---NSKPCPKCKRPIEK 299
Query: 220 KEGCRYMRCS 229
GC +M C+
Sbjct: 300 NHGCMHMTCT 309
>sp|Q9Y4X5|ARI1_HUMAN E3 ubiquitin-protein ligase ARIH1 OS=Homo sapiens GN=ARIH1 PE=1
SV=2
Length = 557
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 15/175 (8%)
Query: 63 FSIKGCSHSYCTECMTKYVASKLQENIT--SINCPVADCKGVLEPEYCRDILPEDVFNRW 120
F+ C H +C +C ++Y+ +K+ E +I+CP C +++ ++ +
Sbjct: 198 FTGLECGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDDNTVMRLITDSKVKLK 257
Query: 121 GNALCEAVILGAQKF--YCPFKDCSALLIDDGGEAIRESVCPDCNRMFCAQCKVPWHAGI 178
L + + +CP DC ++ +A + V C R FC C WH +
Sbjct: 258 YQHLITNSFVECNRLLKWCPAPDCHHVVKVQYPDA--KPVRCKCGRQFCFNCGENWHDPV 315
Query: 179 RCAEFQKLHK---DEREPEDIMLMTLAQKENWRRCPNCKIFVEKKEGCRYMRCSS 230
+C +K K D+ E + + N + CP C + +EK GC +M C +
Sbjct: 316 KCKWLKKWIKKCDDDSETSNWIAA------NTKECPKCHVTIEKDGGCNHMVCRN 364
>sp|Q32NS4|ARI1_XENLA E3 ubiquitin-protein ligase arih1 OS=Xenopus laevis GN=arih1 PE=2
SV=1
Length = 529
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 91/224 (40%), Gaps = 18/224 (8%)
Query: 14 GKAKKPFSSRSVTEKGQCSNSKNEVTIEERIETSFICDICVEPKSTDESFSIKGCSHSYC 73
G +K FS V + S ++ T ++ C IC + F+ C H +C
Sbjct: 124 GNLEKLFSECHVINPSKKSRTRQMNTRSSALDMP--CQICY-LNYPNSYFTGLECGHKFC 180
Query: 74 TECMTKYVASKLQENIT--SINCPVADCKGVLEPEYCRDILPEDVFNRWGNALCEAVILG 131
+C +Y+ +K+ E +I+CP C +++ ++ + L +
Sbjct: 181 MQCWGEYLTTKIIEEGMGQTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLITNSFVE 240
Query: 132 AQKF--YCPFKDCSALLIDDGGEAIRESVCPDCNRMFCAQCKVPWHAGIRCAEFQKLHK- 188
+ +CP DC ++ +A + V C R FC C WH ++C +K K
Sbjct: 241 CNRLLKWCPAPDCHHVVKVQYPDA--KPVHCKCGRQFCFNCGENWHDPVKCKWLRKWIKK 298
Query: 189 --DEREPEDIMLMTLAQKENWRRCPNCKIFVEKKEGCRYMRCSS 230
D+ E + + N + CP C + +EK GC +M C +
Sbjct: 299 CDDDSETSNWIAA------NTKECPKCHVTIEKDGGCNHMVCRN 336
>sp|B1H1E4|ARI1_XENTR E3 ubiquitin-protein ligase arih1 OS=Xenopus tropicalis GN=arih1
PE=2 SV=1
Length = 529
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 15/175 (8%)
Query: 63 FSIKGCSHSYCTECMTKYVASKLQENIT--SINCPVADCKGVLEPEYCRDILPEDVFNRW 120
F+ C H +C +C ++Y+ +K+ E +I+CP C +++ ++ +
Sbjct: 170 FTGLECGHKFCMQCWSEYLTTKIIEEGMGQTISCPAHGCDILVDDNTVMRLITDSKVKLK 229
Query: 121 GNALCEAVILGAQKF--YCPFKDCSALLIDDGGEAIRESVCPDCNRMFCAQCKVPWHAGI 178
L + + +CP DC ++ +A + V C R FC C WH +
Sbjct: 230 YQHLITNSFVECNRLLKWCPAPDCHHVVKVQYPDA--KPVRCKCGRQFCFNCGENWHDPV 287
Query: 179 RCAEFQKLHK---DEREPEDIMLMTLAQKENWRRCPNCKIFVEKKEGCRYMRCSS 230
+C +K K D+ E + + N + CP C + +EK GC +M C +
Sbjct: 288 KCKWLKKWIKKCDDDSETSNWIAA------NTKECPKCHVTIEKDGGCNHMVCRN 336
>sp|Q6NW85|ARI1L_DANRE E3 ubiquitin-protein ligase arih1l OS=Danio rerio GN=arih1l PE=2
SV=1
Length = 533
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 74/175 (42%), Gaps = 15/175 (8%)
Query: 63 FSIKGCSHSYCTECMTKYVASKLQENIT--SINCPVADCKGVLEPEYCRDILPEDVFNRW 120
F+ C H +C +C Y+ +K+ E +I+CP +C +++ ++ +
Sbjct: 174 FTGLECGHKFCMQCWGDYLTTKIIEEGMGQTISCPAHNCDILVDDNTVMRLITDSKVKLK 233
Query: 121 GNALCEAVILGAQKF--YCPFKDCSALLIDDGGEAIRESVCPDCNRMFCAQCKVPWHAGI 178
L + + +CP DC ++ +A + V C R FC C WH +
Sbjct: 234 YQHLITNSFVECNRLLKWCPAPDCHHVVKVQYPDA--KPVRCKCGRQFCFNCGENWHDPV 291
Query: 179 RCAEFQKLHK---DEREPEDIMLMTLAQKENWRRCPNCKIFVEKKEGCRYMRCSS 230
+C +K K D+ E + + N + CP C + +EK GC +M C +
Sbjct: 292 KCKWLRKWIKKCDDDSETSNWIAA------NTKECPKCHVTIEKDGGCNHMVCRN 340
>sp|Q08B84|RN19B_XENLA E3 ubiquitin-protein ligase RNF19B OS=Xenopus laevis GN=rnf19b PE=2
SV=2
Length = 687
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 78/192 (40%), Gaps = 14/192 (7%)
Query: 50 CDICVEPKSTDESFSIKGCSHSYCTECMTKYVASKLQENITSINCPVADCKGVLEPEYCR 109
C +C+ + +E + C H C C+ +Y+ ++ E+ ++ CP +C L P++ R
Sbjct: 95 CPLCLVRQPPEEIPELLSCRHRSCLRCLRQYLRIEICESRVNLRCP--ECAERLSPQHVR 152
Query: 110 DILPEDVFNRWGNALCEAVILGAQK--FYCPFKDCSALLIDDGGEAIRESVC--PDCNRM 165
IL + + R L A +CP DC +I G + + C C
Sbjct: 153 AILRDPLLTRKYEEFLLRRCLAADPDCRWCPAPDCGYAVIAYGCASCPKLTCEREGCRTE 212
Query: 166 FCAQCKVPWHAGIRC--AEFQK---LHKDEREPEDIML-MTLAQKENWRRCPNCKIFVEK 219
FC CK WH C A Q+ L + P I ++ + CP C ++ K
Sbjct: 213 FCYHCKHVWHPNQTCDMARQQRAPSLGVRRKHPSGISYGQESGSADDMKSCPRCSAYIIK 272
Query: 220 KE--GCRYMRCS 229
C +M CS
Sbjct: 273 MNDGSCNHMTCS 284
>sp|P0C8K8|ARI6_ARATH Putative E3 ubiquitin-protein ligase ARI6 OS=Arabidopsis thaliana
GN=ARI6 PE=5 SV=1
Length = 552
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 77/186 (41%), Gaps = 9/186 (4%)
Query: 48 FICDICVEPKSTDESFSIKGCSHSYCTECMTKYVASKLQEN--ITSINCPVADCKGVLEP 105
F C IC E +E+ S+ C H +C C T Y+++ + + + CP C +
Sbjct: 131 FTCGICFESYPLEETISVS-CGHPFCATCWTGYISTSINDGPGCLMLKCPYPCCPAAIGR 189
Query: 106 EYCRDILPEDVFNRWGNALCEAVILGAQKFYC-PFKDCSALLIDDGGEAIRESVCPDCNR 164
+ ++ ++ R+ + + ++ C P C + G V C+
Sbjct: 190 DMIDNLCSKEDKERYYRYFLRSYVEVNREMKCCPAPGCEHAISFAAGTESNYDVSCLCSH 249
Query: 165 MFCAQCKVPWHAGIRCAEFQK-LHKDEREPEDIMLMTLAQKENWRRCPNCKIFVEKKEGC 223
FC C H + C K + K+ E E+ M LA N + CP CK +EK GC
Sbjct: 250 SFCWNCSEEAHRPVDCDTVGKWILKNSTESEN-MNWILA---NSKPCPKCKRPIEKNHGC 305
Query: 224 RYMRCS 229
+M C+
Sbjct: 306 MHMTCT 311
>sp|Q6PFJ9|ARI1_DANRE E3 ubiquitin-protein ligase arih1 OS=Danio rerio GN=arih1 PE=2 SV=1
Length = 527
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 73/175 (41%), Gaps = 15/175 (8%)
Query: 63 FSIKGCSHSYCTECMTKYVASKLQENIT--SINCPVADCKGVLEPEYCRDILPEDVFNRW 120
F+ C H +C +C Y+ +K+ E +I+CP C +++ ++ +
Sbjct: 168 FTGLECGHKFCMQCWGDYLTTKIIEEGMGQTISCPAHSCDILVDDNTVMRLITDSKVKLK 227
Query: 121 GNALCEAVILGAQKF--YCPFKDCSALLIDDGGEAIRESVCPDCNRMFCAQCKVPWHAGI 178
L + + +CP DC ++ +A + V C R FC C WH +
Sbjct: 228 YQHLITNSFVECNRLLKWCPAPDCHHVVKVQYPDA--KPVRCKCGRQFCFNCGENWHDPV 285
Query: 179 RCAEFQKLHK---DEREPEDIMLMTLAQKENWRRCPNCKIFVEKKEGCRYMRCSS 230
+C +K K D+ E + + N + CP C + +EK GC +M C +
Sbjct: 286 KCKWLRKWIKKCDDDSETSNWIAA------NTKECPKCHVTIEKDGGCNHMVCRN 334
>sp|Q9US46|ITT1_SCHPO E3 ubiquitin-protein ligase itt1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=itt1 PE=4 SV=1
Length = 435
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 92/231 (39%), Gaps = 41/231 (17%)
Query: 35 KNEVTIEERIETSFICDICVEPKSTDESFSIKGCSHSYCTECMTKYVASKLQENITS-IN 93
KN +E +I F C++C + + + F + C H C C+ Y +QE + S I
Sbjct: 160 KNAKLLEFQIR-KFQCNVCFDEFNGTDCFQLTRCGHVSCQSCLRDYYTMCIQEGMFSQIK 218
Query: 94 CPVADCKG---VLEPEYCRDILPEDVFNRWGNALCEAVIL--GAQKFYCPFKDCSALLID 148
C DC VL + I+ + NR+ L E + +CP C
Sbjct: 219 CIDLDCGKDAPVLTLKELESIVGVQLTNRY-KELEEKRRYENDSNIIFCPRSFCQGPSKR 277
Query: 149 DGGEAIRESVCPDCNRMFCAQCKVPWHAGIRCAEFQK---------LHKDEREPE----- 194
D G+ + ++C C+ FC+ C+ WH + + + L+ E EPE
Sbjct: 278 DPGQKL--AICQKCDFAFCSFCQATWHGDLSPCKLEGDSKKLVEMYLNYQENEPEKALEL 335
Query: 195 ---------DIMLMTLAQKE--------NWRRCPNCKIFVEKKEGCRYMRC 228
D ++ + E N +RCP C VE+ +GC +M C
Sbjct: 336 EKRYGKRIIDRLVEQVKNDEEAEKWVLLNGQRCPTCDRVVERIDGCCHMNC 386
>sp|O60260|PRKN2_HUMAN E3 ubiquitin-protein ligase parkin OS=Homo sapiens GN=PARK2 PE=1
SV=2
Length = 465
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 74/183 (40%), Gaps = 27/183 (14%)
Query: 70 HSYCTECMTKYVASKLQENI--------TSINCPVADCKGVLEPEYCR-DILPEDVFNRW 120
H C +C Y ++L + S+ C VA C L E IL E+ +NR+
Sbjct: 257 HVICLDCFHLYCVTRLNDRQFVHDPQLGYSLPC-VAGCPNSLIKELHHFRILGEEQYNRY 315
Query: 121 GNALCEAVILGAQKFYCPFKDCSALLIDDGGEAIRESVCPDCNRM-----FCAQCKVPWH 175
E +L CP C A L+ + + R+ C N + FC +CK +H
Sbjct: 316 QQYGAEECVLQMGGVLCPRPGCGAGLLPEPDQ--RKVTCEGGNGLGCGFAFCRECKEAYH 373
Query: 176 AGIRCAEF-------QKLHKDEREPEDIMLMTLAQ---KENWRRCPNCKIFVEKKEGCRY 225
G A F Q DER E ++ K+ + CP C + VEK GC +
Sbjct: 374 EGECSAVFEASGTTTQAYRVDERAAEQARWEAASKETIKKTTKPCPRCHVPVEKNGGCMH 433
Query: 226 MRC 228
M+C
Sbjct: 434 MKC 436
>sp|Q80TT8|CUL9_MOUSE Cullin-9 OS=Mus musculus GN=Cul9 PE=2 SV=2
Length = 1865
Score = 50.4 bits (119), Expect = 1e-05, Method: Composition-based stats.
Identities = 47/192 (24%), Positives = 79/192 (41%), Gaps = 18/192 (9%)
Query: 50 CDICVEPKSTDESFSIKGCSHSYCTECMTKYVASKLQEN-ITSINCPVADCKGVLEPEYC 108
C +CV P + C H C C +Y+ +++++N + + CP+ADC +
Sbjct: 1409 CPVCVTPLGPHDDSPSLCCLHCCCKSCWNEYLTTRIEQNFVLNCTCPIADCPAQPTGAFI 1468
Query: 109 RDILPE-DVFNRWGNALCEAVILGAQKF-YCPF-KDCSALLIDDGGEAIRESVCPDCNRM 165
R+I+ +V +++ AL + +C + C +L G + + C C
Sbjct: 1469 RNIVSSPEVISKYEKALLRGYVESCSNLTWCTNPQGCDRILCRQGLGS--GTTCSKCGWA 1526
Query: 166 FCAQCKVP-WHAGIRCAEFQKLHKD-------EREPEDIMLMTLAQKENWRRCPNCKIFV 217
C C P H C + D E + L L K RCP+C+ +
Sbjct: 1527 SCFSCSFPEAHYPASCGHMSQWVDDGGYYDGMSVEAQSKHLAKLISK----RCPSCQAPI 1582
Query: 218 EKKEGCRYMRCS 229
EK EGC +M C+
Sbjct: 1583 EKNEGCLHMTCA 1594
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.444
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,075,192
Number of Sequences: 539616
Number of extensions: 3544118
Number of successful extensions: 8643
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 123
Number of HSP's that attempted gapping in prelim test: 8353
Number of HSP's gapped (non-prelim): 290
length of query: 234
length of database: 191,569,459
effective HSP length: 114
effective length of query: 120
effective length of database: 130,053,235
effective search space: 15606388200
effective search space used: 15606388200
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)