Query 048118
Match_columns 303
No_of_seqs 184 out of 2129
Neff 10.9
Searched_HMMs 29240
Date Mon Mar 25 10:53:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048118.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048118hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aow_A Guanine nucleotide-bind 100.0 1.2E-45 4.2E-50 311.5 40.4 289 1-301 24-336 (340)
2 3frx_A Guanine nucleotide-bind 100.0 7.4E-45 2.5E-49 305.1 39.6 284 3-301 5-316 (319)
3 3dm0_A Maltose-binding peripla 100.0 1.7E-45 5.7E-50 339.6 38.8 300 3-303 370-694 (694)
4 2xzm_R RACK1; ribosome, transl 100.0 5.3E-43 1.8E-47 296.7 39.3 292 2-301 8-339 (343)
5 2pbi_B Guanine nucleotide-bind 100.0 3.2E-41 1.1E-45 286.9 38.1 266 6-299 55-354 (354)
6 1got_B GT-beta; complex (GTP-b 100.0 5.2E-41 1.8E-45 284.1 38.9 263 6-299 46-340 (340)
7 3ow8_A WD repeat-containing pr 100.0 7.1E-41 2.4E-45 281.1 37.0 266 8-300 25-319 (321)
8 1vyh_C Platelet-activating fac 100.0 4.3E-40 1.5E-44 285.4 37.9 263 8-300 101-409 (410)
9 3iz6_a 40S ribosomal protein R 100.0 3.3E-41 1.1E-45 289.6 30.4 275 5-302 56-375 (380)
10 2ynn_A Coatomer subunit beta'; 100.0 2.3E-40 7.9E-45 275.9 34.1 250 5-302 3-259 (304)
11 3fm0_A Protein CIAO1; WDR39,SG 100.0 3E-40 1E-44 280.0 34.0 285 1-301 1-334 (345)
12 2hes_X YDR267CP; beta-propelle 100.0 9.1E-40 3.1E-44 275.4 35.4 275 3-302 2-328 (330)
13 4gqb_B Methylosome protein 50; 100.0 1.6E-38 5.5E-43 269.0 34.9 244 13-301 80-330 (344)
14 4g56_B MGC81050 protein; prote 100.0 1.2E-38 4.3E-43 271.3 33.0 265 11-301 38-342 (357)
15 2pm7_B Protein transport prote 100.0 3E-38 1E-42 262.3 32.8 256 9-301 3-284 (297)
16 4ery_A WD repeat-containing pr 100.0 6.8E-37 2.3E-41 255.6 37.9 270 4-301 12-311 (312)
17 1nr0_A Actin interacting prote 100.0 4.4E-37 1.5E-41 279.4 39.5 266 7-301 51-354 (611)
18 1nr0_A Actin interacting prote 100.0 8E-37 2.7E-41 277.8 37.4 268 9-301 141-566 (611)
19 3bg1_A Protein SEC13 homolog; 100.0 5.1E-38 1.7E-42 263.2 25.3 254 10-301 8-292 (316)
20 3ei3_B DNA damage-binding prot 100.0 1.6E-36 5.5E-41 260.4 34.1 274 4-302 62-382 (383)
21 2ymu_A WD-40 repeat protein; u 100.0 6.3E-36 2.2E-40 269.8 37.6 258 7-299 295-577 (577)
22 4e54_B DNA damage-binding prot 100.0 4.4E-37 1.5E-41 268.6 24.8 215 7-245 111-332 (435)
23 1erj_A Transcriptional repress 100.0 5.6E-35 1.9E-39 251.9 37.0 264 13-302 62-389 (393)
24 1sq9_A Antiviral protein SKI8; 100.0 2.1E-35 7.1E-40 254.3 33.9 291 5-301 6-394 (397)
25 1gxr_A ESG1, transducin-like e 100.0 3.4E-34 1.2E-38 240.9 39.7 263 11-301 47-336 (337)
26 4gqb_B Methylosome protein 50; 100.0 2.5E-35 8.6E-40 249.4 32.8 254 11-301 26-288 (344)
27 3zwl_B Eukaryotic translation 100.0 1.8E-34 6.2E-39 245.4 36.7 265 9-301 26-345 (369)
28 1k8k_C P40, ARP2/3 complex 41 100.0 9.4E-35 3.2E-39 247.8 34.8 285 11-301 4-360 (372)
29 3jrp_A Fusion protein of prote 100.0 3E-35 1E-39 251.3 31.7 258 7-301 3-286 (379)
30 2ynn_A Coatomer subunit beta'; 100.0 5.7E-35 1.9E-39 243.3 32.4 248 7-301 47-301 (304)
31 2ymu_A WD-40 repeat protein; u 100.0 4.2E-34 1.5E-38 257.8 38.4 260 7-301 254-538 (577)
32 3odt_A Protein DOA1; ubiquitin 100.0 2.9E-34 9.8E-39 239.0 34.0 260 4-301 7-295 (313)
33 3k26_A Polycomb protein EED; W 100.0 7.3E-35 2.5E-39 247.7 27.3 272 11-302 14-366 (366)
34 3f3f_A Nucleoporin SEH1; struc 100.0 3.8E-34 1.3E-38 241.1 31.1 273 9-301 5-336 (351)
35 1r5m_A SIR4-interacting protei 100.0 5.4E-34 1.9E-38 246.9 32.6 266 11-301 41-360 (425)
36 3gre_A Serine/threonine-protei 100.0 6.8E-35 2.3E-39 254.5 27.0 290 7-299 54-437 (437)
37 3i2n_A WD repeat-containing pr 100.0 4.4E-34 1.5E-38 242.2 30.5 289 6-302 9-353 (357)
38 4a11_B DNA excision repair pro 100.0 3.4E-33 1.2E-37 240.8 36.4 281 9-302 37-365 (408)
39 3dwl_C Actin-related protein 2 100.0 5.2E-35 1.8E-39 250.3 21.6 248 12-300 8-279 (377)
40 3ow8_A WD repeat-containing pr 100.0 3.5E-33 1.2E-37 234.2 32.1 223 6-238 71-319 (321)
41 2pm9_A Protein WEB1, protein t 100.0 5.6E-34 1.9E-38 246.7 28.0 265 14-302 11-337 (416)
42 3dw8_B Serine/threonine-protei 100.0 5.5E-34 1.9E-38 249.1 28.2 268 13-301 26-372 (447)
43 4aez_A CDC20, WD repeat-contai 100.0 2.3E-33 7.9E-38 242.4 31.5 241 14-301 133-379 (401)
44 3dwl_C Actin-related protein 2 100.0 2.2E-34 7.5E-39 246.4 24.6 271 6-300 46-377 (377)
45 1gxr_A ESG1, transducin-like e 100.0 8E-33 2.7E-37 232.5 32.1 259 14-301 8-295 (337)
46 2xyi_A Probable histone-bindin 100.0 2E-33 6.8E-38 245.0 29.3 272 10-301 123-409 (430)
47 2j04_B YDR362CP, TAU91; beta p 100.0 8E-35 2.7E-39 258.5 20.8 246 14-301 132-427 (524)
48 4h5i_A Guanine nucleotide-exch 100.0 6.7E-33 2.3E-37 236.6 31.2 259 16-300 15-341 (365)
49 1got_B GT-beta; complex (GTP-b 100.0 2.7E-32 9.3E-37 230.7 34.0 225 56-301 48-300 (340)
50 1vyh_C Platelet-activating fac 100.0 1.7E-32 5.9E-37 237.6 33.1 221 57-301 102-368 (410)
51 4gga_A P55CDC, cell division c 100.0 1.7E-32 5.8E-37 238.4 32.6 243 10-301 142-394 (420)
52 3jro_A Fusion protein of prote 100.0 2.3E-33 7.8E-38 260.6 28.2 256 9-301 3-284 (753)
53 4g56_B MGC81050 protein; prote 100.0 6.9E-33 2.4E-37 235.8 28.9 228 10-241 89-344 (357)
54 2j04_B YDR362CP, TAU91; beta p 100.0 3.6E-34 1.2E-38 254.3 21.7 267 10-302 202-517 (524)
55 3mkq_A Coatomer beta'-subunit; 100.0 7.2E-33 2.5E-37 259.3 30.8 250 5-302 3-259 (814)
56 2pm9_A Protein WEB1, protein t 100.0 3.7E-34 1.2E-38 247.9 20.3 281 6-302 104-414 (416)
57 3vl1_A 26S proteasome regulato 100.0 4.3E-33 1.5E-37 241.7 26.3 238 16-301 57-321 (420)
58 2aq5_A Coronin-1A; WD40 repeat 100.0 1E-32 3.4E-37 238.4 28.3 246 18-302 37-299 (402)
59 1r5m_A SIR4-interacting protei 100.0 3.4E-32 1.1E-36 235.7 30.8 275 14-301 107-424 (425)
60 3sfz_A APAF-1, apoptotic pepti 100.0 2.4E-32 8.4E-37 266.5 33.3 266 10-301 610-912 (1249)
61 2aq5_A Coronin-1A; WD40 repeat 100.0 1.2E-32 4E-37 238.0 27.4 256 8-301 74-341 (402)
62 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.9E-32 9.9E-37 231.0 28.4 205 76-300 10-223 (345)
63 3frx_A Guanine nucleotide-bind 100.0 9.3E-32 3.2E-36 225.4 31.1 203 76-301 12-226 (319)
64 3mmy_A MRNA export factor; mRN 100.0 1.7E-32 5.7E-37 233.2 26.6 249 5-299 29-343 (368)
65 1yfq_A Cell cycle arrest prote 100.0 2.9E-32 9.9E-37 229.9 27.4 251 11-302 7-282 (342)
66 3v7d_B Cell division control p 100.0 2.6E-31 8.8E-36 233.6 33.7 244 6-301 153-420 (464)
67 3vl1_A 26S proteasome regulato 100.0 2.9E-31 9.8E-36 230.2 33.1 259 7-302 131-419 (420)
68 2pm7_B Protein transport prote 100.0 7.5E-32 2.6E-36 223.7 28.1 209 77-301 5-237 (297)
69 4ery_A WD repeat-containing pr 100.0 4.4E-31 1.5E-35 220.4 32.1 203 76-301 18-222 (312)
70 2j04_A TAU60, YPL007P, hypothe 100.0 6.1E-32 2.1E-36 236.2 27.2 255 2-301 4-296 (588)
71 2xzm_R RACK1; ribosome, transl 100.0 3.9E-31 1.3E-35 223.8 30.5 202 76-300 16-242 (343)
72 3dw8_B Serine/threonine-protei 100.0 1E-31 3.6E-36 234.7 27.6 287 6-299 72-443 (447)
73 1pgu_A Actin interacting prote 100.0 8.7E-31 3E-35 237.5 34.2 288 6-301 54-401 (615)
74 3v7d_B Cell division control p 100.0 1E-30 3.5E-35 229.8 33.3 242 8-302 114-381 (464)
75 4ggc_A P55CDC, cell division c 100.0 1.4E-30 4.9E-35 217.2 31.9 243 10-301 62-314 (318)
76 2pbi_B Guanine nucleotide-bind 100.0 1.1E-30 3.7E-35 222.0 31.5 226 56-301 57-314 (354)
77 1erj_A Transcriptional repress 100.0 1.9E-30 6.3E-35 223.7 32.4 208 78-301 61-286 (393)
78 2hes_X YDR267CP; beta-propelle 100.0 9.3E-31 3.2E-35 220.3 29.7 226 13-240 56-328 (330)
79 4aez_A CDC20, WD repeat-contai 100.0 1.8E-30 6.2E-35 224.3 31.8 241 11-301 87-335 (401)
80 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1E-29 3.5E-34 222.4 36.8 263 6-302 150-442 (445)
81 3lrv_A PRE-mRNA-splicing facto 100.0 3.7E-31 1.3E-35 223.9 25.4 232 22-301 43-291 (343)
82 3mkq_A Coatomer beta'-subunit; 100.0 7.2E-30 2.5E-34 239.0 35.9 228 7-241 47-303 (814)
83 3sfz_A APAF-1, apoptotic pepti 100.0 9E-31 3.1E-35 255.5 30.6 292 7-301 735-1157(1249)
84 3bg1_A Protein SEC13 homolog; 100.0 2.6E-31 9E-36 222.3 21.3 208 77-301 9-246 (316)
85 4gq1_A NUP37; propeller, trans 100.0 3.5E-31 1.2E-35 228.2 22.6 233 25-300 98-387 (393)
86 1pgu_A Actin interacting prote 100.0 5.9E-30 2E-34 232.1 30.8 249 11-301 14-282 (615)
87 3iz6_a 40S ribosomal protein R 100.0 2E-30 6.7E-35 222.5 25.5 215 7-242 149-377 (380)
88 1p22_A F-BOX/WD-repeat protein 100.0 7.9E-30 2.7E-34 222.6 29.2 204 77-302 209-414 (435)
89 4e54_B DNA damage-binding prot 100.0 2.3E-30 7.8E-35 226.0 24.1 207 77-302 115-327 (435)
90 1p22_A F-BOX/WD-repeat protein 100.0 7.4E-29 2.5E-33 216.4 33.2 231 12-301 130-364 (435)
91 3jrp_A Fusion protein of prote 100.0 2.2E-29 7.4E-34 214.9 28.9 210 76-301 6-239 (379)
92 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.7E-29 5.9E-34 221.4 28.7 278 16-300 5-337 (450)
93 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2.4E-28 8.2E-33 213.7 35.8 256 8-301 111-390 (445)
94 3vu4_A KMHSV2; beta-propeller 100.0 2.6E-29 9E-34 213.6 28.5 263 9-301 13-335 (355)
95 3dm0_A Maltose-binding peripla 100.0 2.7E-29 9.3E-34 231.5 28.9 204 76-301 377-591 (694)
96 2oaj_A Protein SNI1; WD40 repe 100.0 3.5E-29 1.2E-33 236.0 29.6 257 11-301 13-311 (902)
97 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.2E-28 4.2E-33 216.0 30.2 250 12-301 99-390 (450)
98 1yfq_A Cell cycle arrest prote 100.0 1E-28 3.6E-33 208.1 28.2 232 10-294 51-315 (342)
99 2w18_A PALB2, fancn, partner a 100.0 1.4E-28 4.7E-33 202.8 27.0 258 18-301 42-356 (356)
100 3odt_A Protein DOA1; ubiquitin 100.0 5.4E-28 1.8E-32 201.0 30.5 230 7-246 51-302 (313)
101 2oaj_A Protein SNI1; WD40 repe 100.0 7.7E-29 2.6E-33 233.7 27.9 255 10-301 430-782 (902)
102 1sq9_A Antiviral protein SKI8; 100.0 2.1E-28 7.3E-33 210.5 28.3 233 6-241 53-396 (397)
103 4h5i_A Guanine nucleotide-exch 100.0 1.7E-28 5.8E-33 209.3 26.7 199 14-240 132-343 (365)
104 4aow_A Guanine nucleotide-bind 100.0 1E-27 3.6E-32 201.7 30.6 205 76-302 33-246 (340)
105 3ei3_B DNA damage-binding prot 100.0 5.5E-28 1.9E-32 207.2 29.3 203 76-302 68-282 (383)
106 3lrv_A PRE-mRNA-splicing facto 100.0 1.9E-28 6.6E-33 207.2 26.1 238 16-299 77-330 (343)
107 1k8k_C P40, ARP2/3 complex 41 100.0 9.1E-28 3.1E-32 204.5 29.6 204 76-302 47-274 (372)
108 3gre_A Serine/threonine-protei 100.0 3.7E-28 1.3E-32 211.9 27.7 246 55-301 54-358 (437)
109 3bws_A Protein LP49; two-domai 100.0 4.3E-27 1.5E-31 204.8 34.3 267 8-303 116-433 (433)
110 3f3f_A Nucleoporin SEH1; struc 100.0 9.7E-28 3.3E-32 201.8 26.8 207 77-301 7-248 (351)
111 2j04_A TAU60, YPL007P, hypothe 100.0 6.3E-28 2.1E-32 211.0 26.2 248 13-291 83-350 (588)
112 1l0q_A Surface layer protein; 100.0 1.5E-26 5.1E-31 198.7 33.8 245 6-301 23-274 (391)
113 4gga_A P55CDC, cell division c 100.0 1.9E-26 6.4E-31 200.3 34.6 233 18-301 108-352 (420)
114 3mmy_A MRNA export factor; mRN 100.0 7.2E-28 2.5E-32 204.5 24.2 222 77-302 35-304 (368)
115 3jro_A Fusion protein of prote 100.0 1.2E-27 4.1E-32 222.2 27.1 209 77-301 5-237 (753)
116 3zwl_B Eukaryotic translation 100.0 2.9E-27 1E-31 200.8 27.2 202 76-302 27-249 (369)
117 3k26_A Polycomb protein EED; W 100.0 1.9E-27 6.6E-32 201.9 24.9 211 80-301 68-317 (366)
118 3i2n_A WD repeat-containing pr 100.0 3E-27 1E-31 200.1 25.6 205 79-301 63-290 (357)
119 2xyi_A Probable histone-bindin 100.0 4.2E-27 1.4E-31 205.1 26.4 220 5-241 171-411 (430)
120 4a11_B DNA excision repair pro 100.0 3.1E-26 1.1E-30 197.2 28.5 218 77-301 39-275 (408)
121 4gq1_A NUP37; propeller, trans 100.0 1E-26 3.5E-31 200.3 24.9 288 11-301 14-347 (393)
122 4ggc_A P55CDC, cell division c 100.0 3.9E-25 1.3E-29 184.2 33.2 233 18-301 28-272 (318)
123 2w18_A PALB2, fancn, partner a 100.0 1.3E-25 4.6E-30 185.0 26.8 214 17-238 113-355 (356)
124 1l0q_A Surface layer protein; 100.0 1E-24 3.5E-29 187.2 32.8 223 29-301 3-232 (391)
125 3vu4_A KMHSV2; beta-propeller 99.9 5.6E-25 1.9E-29 186.9 25.6 200 77-301 15-270 (355)
126 2hqs_A Protein TOLB; TOLB, PAL 99.9 5.9E-24 2E-28 184.3 28.4 241 9-301 111-386 (415)
127 3bws_A Protein LP49; two-domai 99.9 8.3E-23 2.8E-27 177.7 26.6 197 82-301 123-333 (433)
128 2hqs_A Protein TOLB; TOLB, PAL 99.9 4.3E-23 1.5E-27 178.9 23.8 238 16-301 63-343 (415)
129 2oit_A Nucleoporin 214KDA; NH2 99.9 3.4E-22 1.2E-26 174.0 24.9 214 16-241 37-279 (434)
130 3u4y_A Uncharacterized protein 99.9 1.8E-20 6.3E-25 157.0 30.4 252 11-302 36-304 (331)
131 1ri6_A Putative isomerase YBHE 99.9 5.6E-20 1.9E-24 154.5 28.3 244 13-301 35-307 (343)
132 1nir_A Nitrite reductase; hemo 99.9 5E-20 1.7E-24 164.6 27.9 247 7-302 171-458 (543)
133 1ri6_A Putative isomerase YBHE 99.9 5.1E-20 1.7E-24 154.7 26.0 236 29-301 6-261 (343)
134 1pby_B Quinohemoprotein amine 99.9 6.7E-20 2.3E-24 153.6 26.6 225 29-302 2-310 (337)
135 2ojh_A Uncharacterized protein 99.9 1.4E-20 4.7E-25 154.6 21.9 235 10-293 36-293 (297)
136 3vgz_A Uncharacterized protein 99.9 1.4E-19 4.8E-24 152.8 28.6 238 16-301 41-302 (353)
137 2ojh_A Uncharacterized protein 99.9 7.8E-20 2.7E-24 150.0 24.4 219 33-301 17-257 (297)
138 2ecf_A Dipeptidyl peptidase IV 99.9 2.3E-20 8E-25 173.1 23.5 256 16-301 37-366 (741)
139 1jmx_B Amine dehydrogenase; ox 99.9 1.5E-19 5.2E-24 152.2 26.1 232 20-302 4-325 (349)
140 1xfd_A DIP, dipeptidyl aminope 99.9 1.7E-20 5.8E-25 173.5 21.7 240 17-299 18-341 (723)
141 3hfq_A Uncharacterized protein 99.9 2.8E-19 9.6E-24 151.0 26.6 247 14-301 38-316 (347)
142 2oit_A Nucleoporin 214KDA; NH2 99.9 2.9E-20 9.9E-25 161.8 19.9 202 83-301 38-277 (434)
143 3u4y_A Uncharacterized protein 99.9 5.7E-19 2E-23 147.9 26.9 229 23-301 5-251 (331)
144 3o4h_A Acylamino-acid-releasin 99.9 2.3E-20 7.7E-25 168.6 19.5 238 15-300 21-274 (582)
145 1nir_A Nitrite reductase; hemo 99.9 1.1E-18 3.7E-23 156.0 28.5 233 22-302 144-402 (543)
146 3vgz_A Uncharacterized protein 99.8 4E-18 1.4E-22 143.8 30.1 236 16-292 89-334 (353)
147 1k32_A Tricorn protease; prote 99.8 2.1E-19 7.1E-24 172.6 24.5 254 11-300 199-500 (1045)
148 3scy_A Hypothetical bacterial 99.8 8.9E-17 3E-21 136.4 32.5 246 14-301 48-336 (361)
149 2z3z_A Dipeptidyl aminopeptida 99.8 5.3E-18 1.8E-22 156.5 26.2 254 13-301 118-434 (706)
150 2ecf_A Dipeptidyl peptidase IV 99.8 6.8E-18 2.3E-22 156.5 23.7 235 17-301 110-412 (741)
151 1xfd_A DIP, dipeptidyl aminope 99.8 3.4E-18 1.2E-22 158.1 21.0 245 11-301 53-392 (723)
152 2z3z_A Dipeptidyl aminopeptida 99.8 6.8E-18 2.3E-22 155.7 22.4 249 18-301 28-341 (706)
153 1k32_A Tricorn protease; prote 99.8 4.5E-17 1.6E-21 156.5 28.5 235 11-301 332-636 (1045)
154 3hfq_A Uncharacterized protein 99.8 7.6E-17 2.6E-21 136.0 26.5 207 80-301 38-270 (347)
155 1jof_A Carboxy-CIS,CIS-muconat 99.8 7.4E-17 2.5E-21 137.3 22.6 243 16-301 40-340 (365)
156 1q7f_A NHL, brain tumor CG1071 99.8 3.6E-15 1.2E-19 122.3 31.8 248 10-302 24-280 (286)
157 1pby_B Quinohemoprotein amine 99.8 2.2E-16 7.7E-21 132.0 24.9 206 17-249 35-319 (337)
158 3scy_A Hypothetical bacterial 99.8 7.4E-16 2.5E-20 130.7 26.4 204 80-301 48-290 (361)
159 1z68_A Fibroblast activation p 99.8 3.1E-17 1.1E-21 151.6 18.9 194 19-243 19-294 (719)
160 3fvz_A Peptidyl-glycine alpha- 99.8 7.9E-15 2.7E-19 122.9 31.7 242 16-301 24-321 (329)
161 1jmx_B Amine dehydrogenase; ox 99.7 3.1E-16 1.1E-20 131.9 20.1 208 17-249 44-334 (349)
162 3o4h_A Acylamino-acid-releasin 99.7 1.1E-15 3.7E-20 138.0 24.0 228 12-300 60-313 (582)
163 4a5s_A Dipeptidyl peptidase 4 99.7 1.7E-15 5.7E-20 140.6 23.4 199 17-242 18-296 (740)
164 1jof_A Carboxy-CIS,CIS-muconat 99.7 1.5E-14 5.1E-19 123.0 24.9 212 83-301 41-290 (365)
165 1z68_A Fibroblast activation p 99.7 3.4E-16 1.2E-20 144.7 15.1 233 18-301 62-390 (719)
166 3pe7_A Oligogalacturonate lyas 99.7 1.7E-14 6E-19 123.2 23.3 247 11-301 26-328 (388)
167 3azo_A Aminopeptidase; POP fam 99.7 2.3E-14 7.9E-19 131.2 23.0 260 10-300 18-321 (662)
168 3e5z_A Putative gluconolactona 99.6 1.6E-13 5.5E-18 113.1 25.2 235 11-297 23-282 (296)
169 3azo_A Aminopeptidase; POP fam 99.6 2.1E-13 7.1E-18 124.9 24.7 159 80-242 128-327 (662)
170 2dg1_A DRP35, lactonase; beta 99.6 7.9E-12 2.7E-16 104.5 31.3 241 11-293 40-301 (333)
171 3no2_A Uncharacterized protein 99.6 1.8E-12 6.1E-17 105.7 26.4 217 28-289 5-230 (276)
172 1rwi_B Serine/threonine-protei 99.6 2.5E-12 8.7E-17 104.2 26.6 236 17-301 25-263 (270)
173 1q7f_A NHL, brain tumor CG1071 99.6 7.6E-12 2.6E-16 102.4 29.5 200 78-300 26-236 (286)
174 2dg1_A DRP35, lactonase; beta 99.6 1.9E-12 6.6E-17 108.3 25.9 241 16-300 6-261 (333)
175 3pe7_A Oligogalacturonate lyas 99.6 2.7E-13 9.3E-18 115.8 20.7 192 87-301 41-272 (388)
176 2xdw_A Prolyl endopeptidase; a 99.6 2.3E-12 8E-17 118.9 28.2 241 13-301 122-413 (710)
177 4a5s_A Dipeptidyl peptidase 4 99.6 1.1E-13 3.9E-18 128.3 18.8 148 84-237 19-199 (740)
178 3c5m_A Oligogalacturonate lyas 99.6 1.5E-13 5E-18 117.6 17.9 231 18-301 38-328 (396)
179 3dsm_A Uncharacterized protein 99.6 1.2E-11 4.1E-16 103.5 29.1 234 18-301 46-301 (328)
180 2oiz_A Aromatic amine dehydrog 99.5 2.9E-12 1E-16 108.7 23.3 72 175-247 259-343 (361)
181 3c5m_A Oligogalacturonate lyas 99.5 1.6E-13 5.6E-18 117.3 15.0 255 20-300 85-380 (396)
182 2bkl_A Prolyl endopeptidase; m 99.5 2.6E-12 8.8E-17 118.4 23.6 241 13-301 118-396 (695)
183 3fvz_A Peptidyl-glycine alpha- 99.5 1.1E-11 3.6E-16 103.8 24.5 164 81-248 23-235 (329)
184 2oiz_A Aromatic amine dehydrog 99.5 2.4E-11 8.1E-16 103.1 25.6 190 86-302 54-334 (361)
185 2z2n_A Virginiamycin B lyase; 99.5 6.8E-10 2.3E-14 90.9 32.6 240 11-300 10-253 (299)
186 2gop_A Trilobed protease; beta 99.5 3E-11 1E-15 101.5 24.2 219 17-300 60-329 (347)
187 2gop_A Trilobed protease; beta 99.5 3.6E-11 1.2E-15 101.0 23.3 182 83-301 60-290 (347)
188 2bkl_A Prolyl endopeptidase; m 99.4 2.5E-11 8.7E-16 111.8 23.0 198 79-300 118-347 (695)
189 1xip_A Nucleoporin NUP159; bet 99.4 5E-12 1.7E-16 107.1 16.6 180 83-289 39-231 (388)
190 1pjx_A Dfpase, DIISOPROPYLFLUO 99.4 5.3E-10 1.8E-14 92.4 27.7 240 16-301 18-298 (314)
191 1xip_A Nucleoporin NUP159; bet 99.4 1.8E-11 6.2E-16 103.7 17.5 180 17-227 39-230 (388)
192 1qks_A Cytochrome CD1 nitrite 99.4 2.7E-09 9.1E-14 95.5 32.1 228 28-301 167-420 (567)
193 3dsm_A Uncharacterized protein 99.4 7.3E-10 2.5E-14 92.6 26.7 190 83-301 45-252 (328)
194 1yr2_A Prolyl oligopeptidase; 99.4 2.5E-10 8.7E-15 105.9 25.7 240 14-301 161-440 (741)
195 3e5z_A Putative gluconolactona 99.4 3.9E-10 1.3E-14 92.7 23.8 195 80-300 26-244 (296)
196 3dr2_A Exported gluconolactona 99.4 3.4E-10 1.2E-14 93.6 23.4 229 16-297 45-302 (305)
197 2z2n_A Virginiamycin B lyase; 99.4 9.3E-09 3.2E-13 84.0 31.8 233 16-300 57-293 (299)
198 3g4e_A Regucalcin; six bladed 99.4 7.3E-09 2.5E-13 85.2 30.8 225 16-290 13-260 (297)
199 2mad_H Methylamine dehydrogena 99.4 7.7E-09 2.6E-13 87.9 31.3 249 7-302 59-350 (373)
200 2xdw_A Prolyl endopeptidase; a 99.3 7.6E-10 2.6E-14 102.2 26.2 195 80-298 123-362 (710)
201 3hrp_A Uncharacterized protein 99.3 4.2E-09 1.5E-13 90.6 27.7 250 17-300 132-408 (409)
202 2qc5_A Streptogramin B lactona 99.3 4.6E-08 1.6E-12 79.9 32.3 235 16-300 20-258 (300)
203 1rwi_B Serine/threonine-protei 99.3 8.9E-10 3E-14 89.0 21.7 194 83-301 25-221 (270)
204 3no2_A Uncharacterized protein 99.3 8E-10 2.7E-14 90.0 20.8 180 92-301 4-194 (276)
205 2ghs_A AGR_C_1268P; regucalcin 99.3 3.8E-08 1.3E-12 82.0 30.9 221 18-291 51-291 (326)
206 1qks_A Cytochrome CD1 nitrite 99.2 7E-09 2.4E-13 92.8 25.4 185 91-301 165-372 (567)
207 2qc5_A Streptogramin B lactona 99.2 1.3E-07 4.4E-12 77.2 30.8 234 16-301 62-299 (300)
208 1yr2_A Prolyl oligopeptidase; 99.2 1.1E-08 3.8E-13 94.8 25.1 194 80-300 161-391 (741)
209 1pjx_A Dfpase, DIISOPROPYLFLUO 99.2 3.2E-08 1.1E-12 81.6 25.0 200 82-301 18-255 (314)
210 3sjl_D Methylamine dehydrogena 99.2 2.6E-08 8.9E-13 84.2 23.5 250 6-302 70-363 (386)
211 3iuj_A Prolyl endopeptidase; h 99.1 1.1E-08 3.8E-13 94.1 23.1 238 13-300 126-403 (693)
212 3c75_H MADH, methylamine dehyd 99.1 9.6E-09 3.3E-13 88.2 20.4 252 6-303 110-403 (426)
213 3hrp_A Uncharacterized protein 99.1 8E-08 2.7E-12 82.7 25.2 206 82-300 131-352 (409)
214 2qe8_A Uncharacterized protein 99.1 7.6E-08 2.6E-12 80.8 24.0 249 5-294 9-313 (343)
215 3g4e_A Regucalcin; six bladed 99.1 4.6E-07 1.6E-11 74.4 26.6 194 84-301 15-228 (297)
216 2ghs_A AGR_C_1268P; regucalcin 99.0 3.5E-07 1.2E-11 76.1 25.6 192 84-300 51-258 (326)
217 2hz6_A Endoplasmic reticulum t 99.0 1E-10 3.6E-15 99.4 3.4 186 28-248 9-200 (369)
218 2ece_A 462AA long hypothetical 98.9 2.6E-06 8.7E-11 72.9 26.8 241 25-290 93-399 (462)
219 2ece_A 462AA long hypothetical 98.9 2E-07 6.8E-12 79.6 19.5 208 91-301 93-351 (462)
220 1mda_H Methylamine dehydrogena 98.9 7.1E-08 2.4E-12 81.4 15.8 243 6-302 57-346 (368)
221 3dr2_A Exported gluconolactona 98.9 8.6E-07 2.9E-11 73.0 22.1 153 82-242 45-226 (305)
222 2hz6_A Endoplasmic reticulum t 98.9 7.4E-10 2.5E-14 94.1 3.5 177 92-301 8-191 (369)
223 2iwa_A Glutamine cyclotransfer 98.9 1.8E-06 6.2E-11 69.1 22.9 203 84-301 23-236 (266)
224 3iuj_A Prolyl endopeptidase; h 98.9 2.6E-07 8.7E-12 85.1 20.0 203 69-300 116-357 (693)
225 3sjl_D Methylamine dehydrogena 98.8 2.4E-07 8.3E-12 78.2 15.4 100 148-249 58-178 (386)
226 2qe8_A Uncharacterized protein 98.8 2.1E-06 7.1E-11 72.0 21.0 204 82-300 17-276 (343)
227 3nol_A Glutamine cyclotransfer 98.7 1E-05 3.5E-10 64.2 22.4 190 85-291 46-244 (262)
228 3nok_A Glutaminyl cyclase; bet 98.7 5E-06 1.7E-10 66.0 20.2 188 85-290 58-253 (268)
229 2mad_H Methylamine dehydrogena 98.7 1.3E-06 4.4E-11 74.1 17.8 94 150-246 48-162 (373)
230 3q7m_A Lipoprotein YFGL, BAMB; 98.7 1.6E-05 5.5E-10 67.2 24.7 224 29-300 54-294 (376)
231 1npe_A Nidogen, entactin; glyc 98.7 7.6E-05 2.6E-09 59.9 27.3 204 17-248 37-246 (267)
232 1fwx_A Nitrous oxide reductase 98.6 3.8E-06 1.3E-10 74.2 19.1 198 91-301 99-360 (595)
233 3mbr_X Glutamine cyclotransfer 98.6 7E-05 2.4E-09 58.8 23.9 191 84-290 23-222 (243)
234 1fwx_A Nitrous oxide reductase 98.6 7.2E-06 2.5E-10 72.5 19.8 90 150-240 255-361 (595)
235 1yiq_A Quinohemoprotein alcoho 98.6 1.5E-05 5.2E-10 73.1 22.7 75 130-206 239-344 (689)
236 1kb0_A Quinohemoprotein alcoho 98.6 1.2E-05 4.2E-10 73.5 22.1 131 150-301 284-506 (677)
237 3c75_H MADH, methylamine dehyd 98.6 2.9E-06 9.9E-11 72.9 16.4 99 149-249 99-218 (426)
238 1kb0_A Quinohemoprotein alcoho 98.6 8.8E-06 3E-10 74.5 20.1 163 86-249 247-516 (677)
239 3hxj_A Pyrrolo-quinoline quino 98.5 2.4E-05 8.1E-10 64.6 20.1 182 85-300 140-322 (330)
240 3q7m_A Lipoprotein YFGL, BAMB; 98.5 2.8E-05 9.7E-10 65.7 20.3 181 93-299 188-375 (376)
241 3hxj_A Pyrrolo-quinoline quino 98.4 4.6E-05 1.6E-09 62.9 19.5 141 93-245 107-248 (330)
242 2fp8_A Strictosidine synthase; 98.3 0.00039 1.3E-08 57.4 22.5 154 84-240 21-216 (322)
243 1yiq_A Quinohemoprotein alcoho 98.3 4.6E-05 1.6E-09 70.0 17.8 163 86-249 239-514 (689)
244 2fp8_A Strictosidine synthase; 98.3 0.0012 3.9E-08 54.5 27.1 251 18-301 21-312 (322)
245 1npe_A Nidogen, entactin; glyc 98.3 0.00097 3.3E-08 53.3 26.9 155 83-241 37-199 (267)
246 2iwa_A Glutamine cyclotransfer 98.2 0.0011 3.9E-08 52.9 23.8 203 5-240 9-237 (266)
247 1mda_H Methylamine dehydrogena 98.1 1.8E-05 6.2E-10 66.7 10.5 89 150-240 47-158 (368)
248 1kv9_A Type II quinohemoprotei 98.1 0.0011 3.7E-08 60.6 22.9 57 150-206 271-339 (668)
249 3nok_A Glutaminyl cyclase; bet 98.1 0.00027 9.1E-09 56.1 16.2 151 126-300 55-208 (268)
250 2ad6_A Methanol dehydrogenase 98.0 0.0011 3.7E-08 59.5 20.1 58 150-208 273-343 (571)
251 2xe4_A Oligopeptidase B; hydro 98.0 0.001 3.5E-08 61.7 19.9 152 83-240 175-354 (751)
252 3nol_A Glutamine cyclotransfer 97.9 0.0015 5.1E-08 51.8 17.0 118 126-249 43-164 (262)
253 3qqz_A Putative uncharacterize 97.9 0.0055 1.9E-07 48.6 24.1 202 11-238 22-251 (255)
254 3mbr_X Glutamine cyclotransfer 97.9 0.0039 1.3E-07 48.9 19.0 121 125-250 20-143 (243)
255 2p4o_A Hypothetical protein; p 97.9 0.0071 2.4E-07 49.4 25.5 225 17-291 33-277 (306)
256 3sov_A LRP-6, low-density lipo 97.8 0.0098 3.4E-07 49.0 23.7 205 18-248 37-246 (318)
257 1w6s_A Methanol dehydrogenase 97.7 0.0058 2E-07 55.0 20.4 58 149-207 278-349 (599)
258 3amr_A 3-phytase; beta-propell 97.7 0.013 4.5E-07 48.5 21.6 188 92-301 39-262 (355)
259 2xe4_A Oligopeptidase B; hydro 97.7 0.011 3.7E-07 54.9 22.5 194 17-238 175-398 (751)
260 4a2l_A BT_4663, two-component 97.7 0.037 1.3E-06 51.6 33.1 158 81-243 309-483 (795)
261 3v65_B Low-density lipoprotein 97.7 0.02 6.8E-07 48.5 23.7 162 84-248 161-326 (386)
262 3v64_C Agrin; beta propeller, 97.6 0.021 7.2E-07 47.6 24.6 162 83-247 117-282 (349)
263 1k3i_A Galactose oxidase precu 97.6 0.011 3.8E-07 53.9 20.6 75 86-163 247-328 (656)
264 3p5b_L Low density lipoprotein 97.6 0.027 9.2E-07 48.0 26.4 163 82-248 159-328 (400)
265 2p9w_A MAL S 1 allergenic prot 97.6 0.019 6.5E-07 47.1 19.4 158 128-301 15-214 (334)
266 1ijq_A LDL receptor, low-densi 97.6 0.023 7.8E-07 46.7 24.9 206 18-247 32-245 (316)
267 3tc9_A Hypothetical hydrolase; 97.5 0.0099 3.4E-07 51.2 17.7 152 128-301 139-300 (430)
268 4hw6_A Hypothetical protein, I 97.4 0.046 1.6E-06 47.1 21.8 152 82-239 139-303 (433)
269 3tc9_A Hypothetical hydrolase; 97.4 0.011 3.6E-07 51.0 17.3 150 83-239 138-300 (430)
270 2p4o_A Hypothetical protein; p 97.4 0.037 1.2E-06 45.1 26.1 191 83-300 33-240 (306)
271 1kv9_A Type II quinohemoprotei 97.4 0.0044 1.5E-07 56.7 14.8 163 86-249 234-497 (668)
272 3v65_B Low-density lipoprotein 97.4 0.052 1.8E-06 45.9 26.7 157 82-241 116-278 (386)
273 1flg_A Protein (quinoprotein e 97.3 0.063 2.2E-06 48.1 21.4 60 190-249 465-525 (582)
274 1n7d_A LDL receptor, low-densi 97.3 0.0029 9.8E-08 58.2 12.8 161 85-248 456-622 (699)
275 3pbp_A Nucleoporin NUP82; beta 97.3 0.031 1.1E-06 47.4 17.7 140 147-297 39-207 (452)
276 4a2l_A BT_4663, two-component 97.3 0.11 3.8E-06 48.3 31.4 156 82-243 357-529 (795)
277 3m0c_C LDL receptor, low-densi 97.2 0.13 4.4E-06 47.9 25.2 161 83-247 472-639 (791)
278 3v9f_A Two-component system se 97.2 0.13 4.6E-06 47.7 28.7 156 82-243 363-527 (781)
279 3qqz_A Putative uncharacterize 97.2 0.053 1.8E-06 42.9 26.0 204 79-299 24-250 (255)
280 3amr_A 3-phytase; beta-propell 97.1 0.084 2.9E-06 43.7 25.2 148 102-250 98-274 (355)
281 2ad6_A Methanol dehydrogenase 97.1 0.12 4E-06 46.3 20.7 67 141-209 117-194 (571)
282 3p5b_L Low density lipoprotein 97.1 0.11 3.7E-06 44.2 28.7 158 81-241 111-278 (400)
283 3v64_C Agrin; beta propeller, 97.1 0.096 3.3E-06 43.6 28.7 157 82-241 73-235 (349)
284 1w6s_A Methanol dehydrogenase 97.1 0.15 5E-06 45.9 21.0 66 142-209 124-200 (599)
285 4hw6_A Hypothetical protein, I 97.0 0.13 4.6E-06 44.1 25.6 211 82-301 182-432 (433)
286 3kya_A Putative phosphatase; s 97.0 0.042 1.4E-06 48.0 16.2 166 128-300 141-339 (496)
287 2xbg_A YCF48-like protein; pho 97.0 0.11 3.8E-06 42.7 30.1 147 83-237 81-231 (327)
288 1flg_A Protein (quinoprotein e 97.0 0.074 2.5E-06 47.7 18.0 79 148-227 465-546 (582)
289 3v9f_A Two-component system se 96.9 0.27 9.3E-06 45.6 30.3 156 81-243 312-481 (781)
290 3s94_A LRP-6, low-density lipo 96.9 0.17 5.7E-06 45.8 19.6 159 82-244 84-247 (619)
291 3sre_A PON1, serum paraoxonase 96.9 0.16 5.3E-06 42.4 21.1 153 86-240 54-252 (355)
292 1k3i_A Galactose oxidase precu 96.9 0.15 5.1E-06 46.4 19.6 116 86-203 190-326 (656)
293 3kya_A Putative phosphatase; s 96.8 0.13 4.3E-06 45.0 17.8 153 83-238 140-339 (496)
294 2p9w_A MAL S 1 allergenic prot 96.8 0.15 5.3E-06 41.8 18.9 153 85-240 16-215 (334)
295 2xbg_A YCF48-like protein; pho 96.8 0.16 5.6E-06 41.7 27.5 189 82-299 122-319 (327)
296 3m0c_C LDL receptor, low-densi 96.6 0.43 1.5E-05 44.4 29.1 159 81-242 423-591 (791)
297 1ijq_A LDL receptor, low-densi 96.6 0.21 7.2E-06 40.8 30.1 156 82-240 30-195 (316)
298 1n7d_A LDL receptor, low-densi 96.4 0.034 1.2E-06 51.0 11.7 155 83-240 407-571 (699)
299 3sov_A LRP-6, low-density lipo 96.3 0.34 1.2E-05 39.6 26.4 155 83-240 36-197 (318)
300 4a0p_A LRP6, LRP-6, low-densit 96.2 0.67 2.3E-05 41.9 25.0 198 17-242 38-239 (628)
301 3pbp_A Nucleoporin NUP82; beta 95.7 0.2 6.8E-06 42.6 12.1 115 180-302 31-158 (452)
302 1tl2_A L10, protein (tachylect 95.6 0.079 2.7E-06 40.7 8.7 107 171-295 42-156 (236)
303 3sre_A PON1, serum paraoxonase 95.6 0.84 2.9E-05 38.0 18.7 132 147-301 81-251 (355)
304 4a0p_A LRP6, LRP-6, low-densit 95.5 1.3 4.5E-05 40.0 28.4 157 82-241 37-198 (628)
305 3sbq_A Nitrous-oxide reductase 95.2 0.14 4.8E-06 45.0 10.0 70 171-240 324-408 (638)
306 1tl2_A L10, protein (tachylect 94.7 0.95 3.3E-05 34.8 12.3 101 127-235 42-158 (236)
307 2be1_A Serine/threonine-protei 94.7 0.046 1.6E-06 45.2 5.5 110 141-250 12-140 (339)
308 2xzh_A Clathrin heavy chain 1; 94.3 1.9 6.5E-05 35.4 17.7 86 150-240 50-135 (365)
309 3s94_A LRP-6, low-density lipo 94.1 3.3 0.00011 37.3 23.7 157 82-241 40-203 (619)
310 3a9g_A Putative uncharacterize 93.3 2.1 7.2E-05 35.5 13.2 70 170-241 29-115 (354)
311 2ism_A Putative oxidoreductase 93.2 3.1 0.00011 34.4 15.9 69 170-241 31-115 (352)
312 2g8s_A Glucose/sorbosone dehyd 92.9 3.4 0.00012 34.1 17.1 144 82-228 18-215 (353)
313 2vpj_A Kelch-like protein 12; 92.7 3.1 0.00011 33.2 19.8 144 92-242 62-233 (301)
314 1bpo_A Protein (clathrin); cla 92.7 4.4 0.00015 34.7 15.8 132 149-301 48-187 (494)
315 3ii7_A Kelch-like protein 7; p 92.5 3.4 0.00012 33.0 19.9 144 92-242 55-227 (306)
316 1cru_A Protein (soluble quinop 92.3 4.6 0.00016 34.8 14.2 52 170-221 27-87 (454)
317 2xn4_A Kelch-like protein 2; s 92.2 3.7 0.00013 32.7 14.8 144 92-242 108-278 (302)
318 2xn4_A Kelch-like protein 2; s 92.0 3.9 0.00013 32.6 19.5 145 92-242 61-231 (302)
319 3das_A Putative oxidoreductase 91.6 5.1 0.00017 33.1 15.1 76 165-240 27-116 (347)
320 2vpj_A Kelch-like protein 12; 91.5 4.5 0.00015 32.2 18.5 106 92-203 112-234 (301)
321 3ei3_A DNA damage-binding prot 91.3 12 0.00039 36.6 25.3 89 192-301 493-590 (1158)
322 2ism_A Putative oxidoreductase 90.4 6.7 0.00023 32.3 23.7 25 18-44 33-57 (352)
323 3a9g_A Putative uncharacterize 90.2 7 0.00024 32.3 18.6 104 82-188 29-153 (354)
324 3ei3_A DNA damage-binding prot 89.9 15 0.00052 35.8 28.6 189 82-291 554-756 (1158)
325 3das_A Putative oxidoreductase 89.9 7.5 0.00026 32.1 16.1 107 82-188 32-158 (347)
326 2be1_A Serine/threonine-protei 89.7 7.6 0.00026 31.9 18.4 113 95-209 12-139 (339)
327 1cru_A Protein (soluble quinop 88.8 11 0.00037 32.5 19.4 107 82-188 27-162 (454)
328 4asc_A Kelch repeat and BTB do 88.6 8.3 0.00028 30.9 14.2 105 92-202 98-223 (315)
329 2g8s_A Glucose/sorbosone dehyd 88.5 9.4 0.00032 31.5 13.8 98 128-228 20-147 (353)
330 1zgk_A Kelch-like ECH-associat 86.8 11 0.00036 30.2 14.1 106 92-203 121-243 (308)
331 3ii7_A Kelch-like protein 7; p 86.4 11 0.00037 30.0 19.3 103 95-203 14-130 (306)
332 1zgk_A Kelch-like ECH-associat 84.4 14 0.00048 29.5 17.8 144 92-242 70-242 (308)
333 4asc_A Kelch repeat and BTB do 84.2 14 0.00049 29.5 20.5 93 149-242 117-223 (315)
334 2woz_A Kelch repeat and BTB do 82.4 17 0.0006 29.0 14.0 52 149-202 175-233 (318)
335 1xi4_A Clathrin heavy chain; a 80.5 18 0.00063 36.1 11.6 87 149-240 48-134 (1630)
336 4gq2_M Nucleoporin NUP120; bet 75.5 4.8 0.00016 38.4 6.2 38 171-208 237-274 (950)
337 2wg3_C Hedgehog-interacting pr 71.9 48 0.0016 28.5 14.6 52 170-221 14-79 (463)
338 2woz_A Kelch repeat and BTB do 70.1 39 0.0013 26.9 18.5 92 150-242 128-233 (318)
339 3sbq_A Nitrous-oxide reductase 68.3 15 0.00052 32.6 7.1 83 210-301 322-407 (638)
340 4fhn_B Nucleoporin NUP120; pro 66.7 5.3 0.00018 38.9 4.5 37 172-208 240-276 (1139)
341 2zwa_A Leucine carboxyl methyl 65.5 81 0.0028 28.7 16.1 108 92-202 451-579 (695)
342 3s25_A Hypothetical 7-bladed b 65.1 52 0.0018 26.3 15.6 138 88-242 59-218 (302)
343 3f7f_A Nucleoporin NUP120; nuc 63.6 13 0.00046 33.9 6.1 35 172-208 224-258 (729)
344 2uvk_A YJHT; unknown function, 59.0 70 0.0024 25.8 13.0 54 192-245 286-347 (357)
345 2wg3_C Hedgehog-interacting pr 58.7 88 0.003 26.9 13.9 55 82-136 14-79 (463)
346 4gq2_M Nucleoporin NUP120; bet 57.1 90 0.0031 29.7 10.9 29 274-302 238-266 (950)
347 3f7f_A Nucleoporin NUP120; nuc 56.5 81 0.0028 28.9 9.8 37 212-249 223-259 (729)
348 3ott_A Two-component system se 55.1 1.3E+02 0.0043 27.6 20.6 156 82-243 373-548 (758)
349 4a9v_A PHOX; hydrolase, beta-p 52.5 93 0.0032 27.7 9.3 18 273-290 532-549 (592)
350 2zwa_A Leucine carboxyl methyl 49.1 1.6E+02 0.0053 26.8 16.8 150 91-242 396-579 (695)
351 1xi4_A Clathrin heavy chain; a 47.2 2.4E+02 0.0083 28.6 13.7 160 82-244 151-335 (1630)
352 3zwu_A Alkaline phosphatase PH 47.1 77 0.0026 28.3 8.2 59 213-290 478-549 (592)
353 1bpo_A Protein (clathrin); cla 45.7 1.5E+02 0.005 25.6 25.7 190 89-301 73-288 (494)
354 3s25_A Hypothetical 7-bladed b 41.7 1.3E+02 0.0045 23.9 17.4 85 149-242 88-178 (302)
355 3mez_B Mannose-specific lectin 39.0 82 0.0028 20.8 10.2 21 216-237 61-81 (113)
356 3zwu_A Alkaline phosphatase PH 35.8 2.4E+02 0.0081 25.2 9.4 56 172-227 478-547 (592)
357 4fhn_B Nucleoporin NUP120; pro 32.5 88 0.003 30.5 6.7 31 83-113 239-269 (1139)
358 3qhy_B Beta-lactamase inhibito 32.3 1.8E+02 0.0062 22.7 14.2 183 83-303 25-208 (282)
359 2uvk_A YJHT; unknown function, 29.5 2.2E+02 0.0074 22.8 15.9 41 149-190 86-128 (357)
360 4a9v_A PHOX; hydrolase, beta-p 27.6 3.3E+02 0.011 24.3 9.7 57 171-227 477-547 (592)
361 1q47_A Semaphorin 3A; beta pro 27.1 2.5E+02 0.0085 24.4 8.0 55 141-195 423-487 (495)
362 3al9_A Plexin-A2; beta-propell 23.6 1.7E+02 0.0058 25.7 6.4 55 141-195 415-476 (539)
363 3nvq_A Semaphorin-7A; beta-pro 23.5 3.5E+02 0.012 24.1 8.3 55 141-195 382-444 (590)
364 3q6k_A 43.2 kDa salivary prote 23.4 3.2E+02 0.011 22.7 14.7 54 151-204 125-194 (381)
No 1
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.2e-45 Score=311.51 Aligned_cols=289 Identities=66% Similarity=1.158 Sum_probs=247.7
Q ss_pred CccceeecccccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCcee--
Q 048118 1 MAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFV-- 78 (303)
Q Consensus 1 ~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-- 78 (303)
|.+++.++++|+||.+.|++|+|+|+++++|+|||.|++|++||+...+.....+...+.+|...|.++.++|++++.
T Consensus 24 ~~~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s 103 (340)
T 4aow_A 24 MTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALS 103 (340)
T ss_dssp --CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred cCCceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEE
Confidence 568889999999999999999999987789999999999999999876655566777888999999999999987532
Q ss_pred ----------------------cccCCEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCC
Q 048118 79 ----------------------GHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPN 136 (303)
Q Consensus 79 ----------------------~h~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 136 (303)
.+...+..+.+++++.++++++.|+.+++||........ .....|...+.+++|+++
T Consensus 104 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~-~~~~~~~~~v~~~~~~~~ 182 (340)
T 4aow_A 104 GSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYT-VQDESHSEWVSCVRFSPN 182 (340)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEE-ECSSSCSSCEEEEEECSC
T ss_pred EcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEE-EEeccccCcccceEEccC
Confidence 456678888999999999999999999999986554333 333567888999999998
Q ss_pred CCCCEEEEEeCCCcEEEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEecCCCeEEEE
Q 048118 137 TLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHAL 216 (303)
Q Consensus 137 ~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~ 216 (303)
.....+++++.|+.|++||+++++....+.+|.+.|++++|+|++++|++|+.|++|++||+++.+.+..+.....+.++
T Consensus 183 ~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~ 262 (340)
T 4aow_A 183 SSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINAL 262 (340)
T ss_dssp SSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEE
T ss_pred CCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEee
Confidence 76678899999999999999999999999999999999999999999999999999999999999999988888899999
Q ss_pred EEcCCCeEEEEEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEE
Q 048118 217 CFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIR 296 (303)
Q Consensus 217 ~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~ 296 (303)
+|+|++.+++++.|+.|++||++++..+..++.... ......+...+++++|+|++++|++|+.||.|+
T Consensus 263 ~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~-----------~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~ 331 (340)
T 4aow_A 263 CFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVI-----------STSSKAEPPQCTSLAWSADGQTLFAGYTDNLVR 331 (340)
T ss_dssp EECSSSSEEEEEETTEEEEEETTTTEEEEEECCC------------------CCCCCEEEEEECTTSSEEEEEETTSCEE
T ss_pred ecCCCCceeeccCCCEEEEEECCCCeEEEeccccce-----------eeeccCCCCCEEEEEECCCCCEEEEEeCCCEEE
Confidence 999999999999999999999998877765542211 112334566788999999999999999999999
Q ss_pred EEecc
Q 048118 297 VWGIG 301 (303)
Q Consensus 297 ~w~~~ 301 (303)
+||+.
T Consensus 332 iW~~~ 336 (340)
T 4aow_A 332 VWQVT 336 (340)
T ss_dssp EEEEE
T ss_pred EEeCC
Confidence 99985
No 2
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=7.4e-45 Score=305.14 Aligned_cols=284 Identities=47% Similarity=0.834 Sum_probs=242.4
Q ss_pred cceeecccccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCc------
Q 048118 3 EGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQ------ 76 (303)
Q Consensus 3 ~~~~~~~~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------ 76 (303)
+-+.+.+++++|.+.|++++|+|+++++|+||+.|++|++|++.......+.+...+.+|...|.++.+++++.
T Consensus 5 ~~~~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s 84 (319)
T 3frx_A 5 EVLVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSAS 84 (319)
T ss_dssp EEEEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred eEEEEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEe
Confidence 34678889999999999999999877899999999999999997655555566778889999999999998764
Q ss_pred ------------------eecccCCEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCC
Q 048118 77 ------------------FVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTL 138 (303)
Q Consensus 77 ------------------~~~h~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 138 (303)
+.+|.+.|.+++|+|++.++++++.|+.|++||..+...... ..|...+.++++.|...
T Consensus 85 ~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~---~~h~~~v~~~~~~~~~~ 161 (319)
T 3frx_A 85 WDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATL---LGHNDWVSQVRVVPNEK 161 (319)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEE---CCCSSCEEEEEECCC--
T ss_pred CCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEE---eccCCcEEEEEEccCCC
Confidence 348999999999999999999999999999999876543332 46788899999998532
Q ss_pred ----CCEEEEEeCCCcEEEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEecCCCeEE
Q 048118 139 ----QPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIH 214 (303)
Q Consensus 139 ----~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~ 214 (303)
...+++++.|+.|++||+++.+....+.+|...|.+++|+|++++|++++.||+|++||+++++.+..+.....+.
T Consensus 162 ~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~ 241 (319)
T 3frx_A 162 ADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVF 241 (319)
T ss_dssp ----CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCSCEE
T ss_pred CCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCcEE
Confidence 2379999999999999999999888999999999999999999999999999999999999999998888888999
Q ss_pred EEEEcCCCeEEEEEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCe
Q 048118 215 ALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGV 294 (303)
Q Consensus 215 ~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~ 294 (303)
+++|+|++.+++++.++.+++|+++.+..+..+...... ....+...+.+++|+|+|++|++|+.||.
T Consensus 242 ~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~------------~~~~~~~~v~~~~~spdg~~l~sg~~Dg~ 309 (319)
T 3frx_A 242 SLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAG------------YSKAAEPHAVSLAWSADGQTLFAGYTDNV 309 (319)
T ss_dssp EEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTT------------CCGGGCCCEEEEEECTTSSEEEEEETTSC
T ss_pred EEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccc------------cccCcCcceeEEEECCCCCEEEEeecCce
Confidence 999999999999999899999999887766554321110 01123345678999999999999999999
Q ss_pred EEEEecc
Q 048118 295 IRVWGIG 301 (303)
Q Consensus 295 v~~w~~~ 301 (303)
|++||+.
T Consensus 310 i~vWd~~ 316 (319)
T 3frx_A 310 IRVWQVM 316 (319)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 9999985
No 3
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.7e-45 Score=339.55 Aligned_cols=300 Identities=86% Similarity=1.388 Sum_probs=249.1
Q ss_pred cceeecccccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCc------
Q 048118 3 EGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQ------ 76 (303)
Q Consensus 3 ~~~~~~~~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------ 76 (303)
..+.+.+.+++|.+.|++++++|++.++|+|||.|++|++|++.......+.....+.+|...|.++.++++++
T Consensus 370 ~~l~~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs 449 (694)
T 3dm0_A 370 AGLVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGS 449 (694)
T ss_dssp CSSEEEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred cccchhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEe
Confidence 34667788999999999999999888899999999999999998765555566777889999999999998864
Q ss_pred ------------------eecccCCEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeee-cCCCCccceEEEEEcCCC
Q 048118 77 ------------------FVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQ-EGDAHTEWVSCVRFSPNT 137 (303)
Q Consensus 77 ------------------~~~h~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~ 137 (303)
+.+|.+.|.+++|+|++.+|++++.|+.|++||........+. ....|...|.+++|+|++
T Consensus 450 ~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 529 (694)
T 3dm0_A 450 WDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNT 529 (694)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCS
T ss_pred CCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCC
Confidence 3489999999999999999999999999999998665544332 234678889999999987
Q ss_pred CCCEEEEEeCCCcEEEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEecCCCeEEEEE
Q 048118 138 LQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALC 217 (303)
Q Consensus 138 ~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~ 217 (303)
....+++++.|+.|++||+++.++...+.+|.+.|++++|+|++++|++++.||+|++||+++++.+..+.....+.+++
T Consensus 530 ~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~ 609 (694)
T 3dm0_A 530 LQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALC 609 (694)
T ss_dssp SSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSSCEEEEE
T ss_pred CcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCCcEEEEE
Confidence 55689999999999999999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EcCCCeEEEEEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEE
Q 048118 218 FSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRV 297 (303)
Q Consensus 218 ~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~ 297 (303)
|+|++.+++++.++.|++||+++++.+..+............... ......+..++++++|+|++++|++|+.||+|++
T Consensus 610 ~sp~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~i 688 (694)
T 3dm0_A 610 FSPNRYWLCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSG-PAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRV 688 (694)
T ss_dssp ECSSSSEEEEEETTEEEEEETTTTEEEEEECCCCC-----------------CCCCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EcCCCcEEEEEcCCCEEEEECCCCCChhhhccccccccccccccc-cccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEE
Confidence 999999999999999999999999888777654332211111100 1112233456789999999999999999999999
Q ss_pred EecccC
Q 048118 298 WGIGRY 303 (303)
Q Consensus 298 w~~~~~ 303 (303)
|++++|
T Consensus 689 W~i~~~ 694 (694)
T 3dm0_A 689 WGIGRY 694 (694)
T ss_dssp EEC---
T ss_pred EeccCC
Confidence 999998
No 4
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=5.3e-43 Score=296.71 Aligned_cols=292 Identities=42% Similarity=0.789 Sum_probs=232.2
Q ss_pred ccceeecccccccccceeeeec-----CCCCCcEEEEecCCCcEEEEEcccCcc--ccceeeeeecCCCcceEEEEeCCC
Q 048118 2 AEGLVLKGTMRAHTDMVTAIAT-----PIDNSDMIVTASRDKSIIVWHLTKEEK--TYGVARRRLTGHSHFVQDVVLSSD 74 (303)
Q Consensus 2 ~~~~~~~~~~~~h~~~v~~v~~-----~~~~~~~~~t~s~d~~i~iw~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~ 74 (303)
..++.+...+++|.+.|++++| ++.++.+|+||+.|++|++|++...+. ..+.+...+.+|...|.++.++++
T Consensus 8 ~~~~~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~ 87 (343)
T 2xzm_R 8 DIQVVKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQE 87 (343)
T ss_dssp EEEEEEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSS
T ss_pred ceEeeeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCC
Confidence 3456677889999999999998 664567999999999999999875432 124456678899999999999887
Q ss_pred Cc------------------------eecccCCEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEE
Q 048118 75 GQ------------------------FVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSC 130 (303)
Q Consensus 75 ~~------------------------~~~h~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~ 130 (303)
+. +.+|.+.|.+++|+|++.+|++++.|+.|++||+.............|...|.+
T Consensus 88 ~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~ 167 (343)
T 2xzm_R 88 NCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSC 167 (343)
T ss_dssp TTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEE
T ss_pred CCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeee
Confidence 63 347999999999999999999999999999999875544433334467888999
Q ss_pred EEEcCCCC--------CCEEEEEeCCCcEEEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCC-CC
Q 048118 131 VRFSPNTL--------QPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLA-EG 201 (303)
Q Consensus 131 ~~~~~~~~--------~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~-~~ 201 (303)
++|+|+.. ...+++++.|+.|++||. ..+....+.+|...|.+++|+|++++|++|+.|++|++||++ ..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~ 246 (343)
T 2xzm_R 168 VRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLT 246 (343)
T ss_dssp EEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCS
T ss_pred eeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCc
Confidence 99999752 147999999999999994 566677888999999999999999999999999999999995 34
Q ss_pred ceEEEecCCCeEEEEEEcCCCeEEEEEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcC
Q 048118 202 KRLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSV 281 (303)
Q Consensus 202 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp 281 (303)
.....+.....+.+++|+|++.+++++.++.|++||+.+++......+..... .......++...+.+++|+|
T Consensus 247 ~~~~~~~~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~v~~~~~sp 319 (343)
T 2xzm_R 247 YPQREFDAGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAPVCTIEAEPI-------TKAEGQKGKNPQCTSLAWNA 319 (343)
T ss_dssp SCSEEEECSSCEEEEEECSSSCEEEEEESSCEEEEESSSCCSCSEEECCCCSG-------GGBTTBCCSCCCEEEEEECS
T ss_pred ccceeecCCCcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCCceEEeecCcc-------hhhhhhcCCCCceEEEEECC
Confidence 44445555677999999999999999999999999998765443111110000 00011224555688999999
Q ss_pred CCCEEEEeecCCeEEEEecc
Q 048118 282 DGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 282 ~~~~l~~gs~Dg~v~~w~~~ 301 (303)
++++|++|+.||.|++|++.
T Consensus 320 ~g~~l~sg~~Dg~v~~w~~~ 339 (343)
T 2xzm_R 320 LGKKLFAGFTDGVIRTFSFE 339 (343)
T ss_dssp SSCCEEEEETTSEEEEEEEE
T ss_pred CCCeEEEecCCceEEEEEEE
Confidence 99999999999999999974
No 5
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.2e-41 Score=286.95 Aligned_cols=266 Identities=26% Similarity=0.369 Sum_probs=219.9
Q ss_pred eecccccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCc---------
Q 048118 6 VLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQ--------- 76 (303)
Q Consensus 6 ~~~~~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--------- 76 (303)
...+++++|.+.|++++|+|++ .+|+|||.|++|++||...... ...+..+...+..+.++|++.
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~-~~l~s~s~Dg~v~vWd~~~~~~-----~~~~~~~~~~v~~~~~sp~g~~lasg~~d~ 128 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDK-RRIVSSSQDGKVIVWDSFTTNK-----EHAVTMPCTWVMACAYAPSGCAIACGGLDN 128 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCCE-----EEEEECSSSCCCEEEECTTSSEEEEESTTS
T ss_pred EEEEEecCCCCeEEEEEECCCC-CEEEEEeCCCeEEEEECCCCCc-----ceEEecCCCCEEEEEECCCCCEEEEeeCCC
Confidence 3456789999999999999875 6899999999999999765432 233445666777777777653
Q ss_pred ---------------------eecccCCEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcC
Q 048118 77 ---------------------FVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSP 135 (303)
Q Consensus 77 ---------------------~~~h~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~ 135 (303)
+.+|.+.|.+++|+|++..+++++.|+.|++||+...... .....|...|.+++|+|
T Consensus 129 ~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~--~~~~~h~~~v~~~~~~~ 206 (354)
T 2pbi_B 129 KCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLL--QSFHGHGADVLCLDLAP 206 (354)
T ss_dssp EEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEE--EEEECCSSCEEEEEECC
T ss_pred CEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEE--EEEcCCCCCeEEEEEEe
Confidence 3368899999999999999999999999999998654322 22245778899999998
Q ss_pred CCCCCEEEEEeCCCcEEEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEecC---CCe
Q 048118 136 NTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDA---GAV 212 (303)
Q Consensus 136 ~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~---~~~ 212 (303)
+.....+++|+.|+.|++||++++++...+.+|...|++++|+|++++|++++.|++|++||++.++.+..+.. ...
T Consensus 207 ~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~ 286 (354)
T 2pbi_B 207 SETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFG 286 (354)
T ss_dssp CSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSC
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccc
Confidence 65446899999999999999999999999999999999999999999999999999999999998877666543 246
Q ss_pred EEEEEEcCCCeEEEE-EcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeec
Q 048118 213 IHALCFSPNRYWLCA-ATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYT 291 (303)
Q Consensus 213 v~~~~~s~~~~~l~~-~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~ 291 (303)
+.+++|+|++.++++ +.|+.|++||+.+++.+.. +.+|...+.+++|+|++++|++|+.
T Consensus 287 ~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~--------------------l~~h~~~v~~l~~spdg~~l~sgs~ 346 (354)
T 2pbi_B 287 ASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSI--------------------LFGHENRVSTLRVSPDGTAFCSGSW 346 (354)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEE--------------------ECCCSSCEEEEEECTTSSCEEEEET
T ss_pred eeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEE--------------------EECCCCcEEEEEECCCCCEEEEEcC
Confidence 889999999876655 5689999999988765543 2345556789999999999999999
Q ss_pred CCeEEEEe
Q 048118 292 DGVIRVWG 299 (303)
Q Consensus 292 Dg~v~~w~ 299 (303)
||+|++|+
T Consensus 347 D~~v~vW~ 354 (354)
T 2pbi_B 347 DHTLRVWA 354 (354)
T ss_dssp TSEEEEEC
T ss_pred CCCEEecC
Confidence 99999996
No 6
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=5.2e-41 Score=284.15 Aligned_cols=263 Identities=24% Similarity=0.403 Sum_probs=220.3
Q ss_pred eecccccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCc---------
Q 048118 6 VLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQ--------- 76 (303)
Q Consensus 6 ~~~~~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--------- 76 (303)
....++++|.+.|++++|+|++ ++|+||+.|++|++||..... ....+..|...+..+.++|++.
T Consensus 46 ~~~~~l~gH~~~v~~~~~s~d~-~~l~s~s~Dg~v~iWd~~~~~-----~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~ 119 (340)
T 1got_B 46 RTRRTLRGHLAKIYAMHWGTDS-RLLLSASQDGKLIIWDSYTTN-----KVHAIPLRSSWVMTCAYAPSGNYVACGGLDN 119 (340)
T ss_dssp CEEEEECCCSSCEEEEEECTTS-SEEEEEETTTEEEEEETTTCC-----EEEEEECSSSCEEEEEECTTSSEEEEEETTC
T ss_pred hhheeecCCCCceEEEEECCCC-CEEEEEeCCCcEEEEECCCCC-----cceEeecCCccEEEEEECCCCCEEEEEeCCC
Confidence 3456789999999999999875 689999999999999986543 2344566777888888887653
Q ss_pred -------------------eecccCCEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCC
Q 048118 77 -------------------FVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNT 137 (303)
Q Consensus 77 -------------------~~~h~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 137 (303)
+.+|.+.|.++.|++++. +++++.|+.|++||+...... .....|...|.+++|+|++
T Consensus 120 ~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~--~~~~~h~~~v~~~~~~~~~ 196 (340)
T 1got_B 120 ICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQT--TTFTGHTGDVMSLSLAPDT 196 (340)
T ss_dssp EEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEE--EEECCCSSCEEEEEECTTS
T ss_pred eEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEE--EEEcCCCCceEEEEECCCC
Confidence 347889999999998875 889999999999998654332 2234688889999999986
Q ss_pred CCCEEEEEeCCCcEEEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEecCC---CeEE
Q 048118 138 LQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAG---AVIH 214 (303)
Q Consensus 138 ~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~---~~v~ 214 (303)
..+++|+.|+.|++||++++++...+.+|...|++++|+|++++|++|+.|++|++||+++++.+..+... ..+.
T Consensus 197 --~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~ 274 (340)
T 1got_B 197 --RLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGIT 274 (340)
T ss_dssp --SEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEE
T ss_pred --CEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceE
Confidence 58999999999999999999999999999999999999999999999999999999999998887776543 3699
Q ss_pred EEEEcCCCeEEE-EEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCC
Q 048118 215 ALCFSPNRYWLC-AATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDG 293 (303)
Q Consensus 215 ~~~~s~~~~~l~-~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg 293 (303)
+++|+|++.+++ ++.|+.|++||+.+++.+..+ .+|...+.+++|+|++.+|++|+.||
T Consensus 275 ~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~--------------------~~h~~~v~~~~~s~dg~~l~s~s~D~ 334 (340)
T 1got_B 275 SVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVL--------------------AGHDNRVSCLGVTDDGMAVATGSWDS 334 (340)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE--------------------ECCSSCEEEEEECTTSSCEEEEETTS
T ss_pred EEEECCCCCEEEEECCCCeEEEEEcccCcEeeEe--------------------ecCCCcEEEEEEcCCCCEEEEEcCCc
Confidence 999999987665 456899999999887655433 34555678899999999999999999
Q ss_pred eEEEEe
Q 048118 294 VIRVWG 299 (303)
Q Consensus 294 ~v~~w~ 299 (303)
+|++||
T Consensus 335 ~i~iWd 340 (340)
T 1got_B 335 FLKIWN 340 (340)
T ss_dssp CEEEEC
T ss_pred cEEecC
Confidence 999997
No 7
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.1e-41 Score=281.07 Aligned_cols=266 Identities=21% Similarity=0.354 Sum_probs=219.0
Q ss_pred cccccccccceeeeecCCC---CCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCc--------
Q 048118 8 KGTMRAHTDMVTAIATPID---NSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQ-------- 76 (303)
Q Consensus 8 ~~~~~~h~~~v~~v~~~~~---~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-------- 76 (303)
...+++|.+.|++++|+|+ +.++|+|||.|++|++|++..... .....+.+|...|.++.+++++.
T Consensus 25 ~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~---~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D 101 (321)
T 3ow8_A 25 FKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERL---DLQWSLEGHQLGVVSVDISHTLPIAASSSLD 101 (321)
T ss_dssp EEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEE---EEEEEECCCSSCEEEEEECSSSSEEEEEETT
T ss_pred eeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCe---eeeeeeccCCCCEEEEEECCCCCEEEEEeCC
Confidence 3568899999999999874 346899999999999999864321 23345678888888888877653
Q ss_pred ----------------eecccCCEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCC
Q 048118 77 ----------------FVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQP 140 (303)
Q Consensus 77 ----------------~~~h~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 140 (303)
+..|...+.+++|+|++++|++++.|+.|++|+......... ...+...+.+++|+|++ .
T Consensus 102 ~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~--~~~~~~~v~~~~~spdg--~ 177 (321)
T 3ow8_A 102 AHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYS--LDTRGKFILSIAYSPDG--K 177 (321)
T ss_dssp SEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEE--EECSSSCEEEEEECTTS--S
T ss_pred CcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEE--ecCCCceEEEEEECCCC--C
Confidence 235667788999999999999999999999999865432211 22456679999999986 5
Q ss_pred EEEEEeCCCcEEEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEec-CCCeEEEEEEc
Q 048118 141 TIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLD-AGAVIHALCFS 219 (303)
Q Consensus 141 ~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~s 219 (303)
.+++++.|+.|++||+++++....+.+|..+|.+++|+|++++|++++.|++|++||+++++.+..+. ....|.+++|+
T Consensus 178 ~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s 257 (321)
T 3ow8_A 178 YLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC 257 (321)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEEC
T ss_pred EEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEEC
Confidence 89999999999999999999999999999999999999999999999999999999999988887775 45679999999
Q ss_pred CCCeEE-EEEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEE
Q 048118 220 PNRYWL-CAATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVW 298 (303)
Q Consensus 220 ~~~~~l-~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w 298 (303)
|++.++ +++.|+.|++||+++++.+..+ ..+...+.+++|+|++.+|++++.||.|++|
T Consensus 258 p~~~~l~s~s~D~~v~iwd~~~~~~~~~~--------------------~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vw 317 (321)
T 3ow8_A 258 PDDTHFVSSSSDKSVKVWDVGTRTCVHTF--------------------FDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 317 (321)
T ss_dssp TTSSEEEEEETTSCEEEEETTTTEEEEEE--------------------CCCSSCEEEEEECTTSSEEEEEETTCCEEEE
T ss_pred CCCCEEEEEeCCCcEEEEeCCCCEEEEEE--------------------cCCCCcEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 998655 4567999999999988766543 2344557889999999999999999999999
Q ss_pred ec
Q 048118 299 GI 300 (303)
Q Consensus 299 ~~ 300 (303)
|.
T Consensus 318 d~ 319 (321)
T 3ow8_A 318 DC 319 (321)
T ss_dssp EC
T ss_pred eC
Confidence 96
No 8
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=4.3e-40 Score=285.42 Aligned_cols=263 Identities=29% Similarity=0.530 Sum_probs=223.3
Q ss_pred cccccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCc-----------
Q 048118 8 KGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQ----------- 76 (303)
Q Consensus 8 ~~~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----------- 76 (303)
...+.+|.+.|+++.|+|++ .+|+||+.|++|++||+.... ....+.+|...|.++.+++++.
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~-~~l~s~s~Dg~i~vwd~~~~~-----~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i 174 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVF-SVMVSASEDATIKVWDYETGD-----FERTLKGHTDSVQDISFDHSGKLLASCSADMTI 174 (410)
T ss_dssp SCEEECCSSCEEEEEECSSS-SEEEEEESSSCEEEEETTTCC-----CCEEECCCSSCEEEEEECTTSSEEEEEETTSCC
T ss_pred eEeecccCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCc-----EEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeE
Confidence 34578999999999999975 689999999999999987543 3456778999999999988764
Q ss_pred -------------eecccCCEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEE
Q 048118 77 -------------FVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIV 143 (303)
Q Consensus 77 -------------~~~h~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 143 (303)
+.+|...|.+++|+|++.++++++.|+.|++||+..... ......|...|.++.++|++ ..++
T Consensus 175 ~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~--~~~~~~h~~~v~~~~~~~~g--~~l~ 250 (410)
T 1vyh_C 175 KLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYC--VKTFTGHREWVRMVRPNQDG--TLIA 250 (410)
T ss_dssp CEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCE--EEEEECCSSCEEEEEECTTS--SEEE
T ss_pred EEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcE--EEEEeCCCccEEEEEECCCC--CEEE
Confidence 247899999999999999999999999999999865322 22224678889999999986 5799
Q ss_pred EEeCCCcEEEEECCCceeEEEEcCCCCCeeEEEECCC--------------------CCEEEEEeCCCeEEEEeCCCCce
Q 048118 144 SASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPD--------------------GSLCASGGKDGVILLWDLAEGKR 203 (303)
Q Consensus 144 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~--------------------~~~l~~~~~d~~v~iwd~~~~~~ 203 (303)
+++.|+.|++||+.++++...+.+|...|.+++|+|+ +.+|++|+.|++|++||+++++.
T Consensus 251 s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~ 330 (410)
T 1vyh_C 251 SCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC 330 (410)
T ss_dssp EEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEE
T ss_pred EEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCce
Confidence 9999999999999999999999999999999999996 67899999999999999999998
Q ss_pred EEEec-CCCeEEEEEEcCCCeEE-EEEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcC
Q 048118 204 LYSLD-AGAVIHALCFSPNRYWL-CAATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSV 281 (303)
Q Consensus 204 ~~~~~-~~~~v~~~~~s~~~~~l-~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp 281 (303)
+..+. +...|.+++|+|++.++ +++.|+.|++||+++++.+..+ ..|...+++++|+|
T Consensus 331 ~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~--------------------~~h~~~v~~l~~~~ 390 (410)
T 1vyh_C 331 LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL--------------------NAHEHFVTSLDFHK 390 (410)
T ss_dssp EEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEE--------------------ECCSSCEEEEEECS
T ss_pred EEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEE--------------------cCCCCcEEEEEEcC
Confidence 88775 46789999999998655 5567999999999887655433 33455678999999
Q ss_pred CCCEEEEeecCCeEEEEec
Q 048118 282 DGSTLFSGYTDGVIRVWGI 300 (303)
Q Consensus 282 ~~~~l~~gs~Dg~v~~w~~ 300 (303)
++.+|++|+.||+|++|++
T Consensus 391 ~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 391 TAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp SSSCEEEEETTSEEEEEC-
T ss_pred CCCEEEEEeCCCcEEEEeC
Confidence 9999999999999999986
No 9
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=3.3e-41 Score=289.61 Aligned_cols=275 Identities=25% Similarity=0.434 Sum_probs=220.8
Q ss_pred eeecccccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCc--------
Q 048118 5 LVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQ-------- 76 (303)
Q Consensus 5 ~~~~~~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-------- 76 (303)
+....++++|.+.|++++|+|++ ++|+||+.|++|++||..... ....+..|...|.++.++|+++
T Consensus 56 ~~~~~~l~gH~~~V~~~~~sp~~-~~l~s~s~D~~v~iWd~~~~~-----~~~~~~~h~~~v~~~~~s~~g~~las~~~d 129 (380)
T 3iz6_a 56 LVCCRTLQGHSGKVYSLDWTPEK-NWIVSASQDGRLIVWNALTSQ-----KTHAIKLHCPWVMECAFAPNGQSVACGGLD 129 (380)
T ss_dssp CEEEEEECCCSSCEEEEEECTTS-SCEEEEETTSEEEEEETTTTE-----EEEEEECCCTTCCCCEECTTSSEEEECCSS
T ss_pred eEEeecccccccEEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCc-----cceEEecCCCCEEEEEECCCCCEEEEeeCC
Confidence 44566799999999999999975 689999999999999986532 3345566777777777777653
Q ss_pred -----------------------eecccCCEEEEEEeeCC-CEEEEEeCCCcEEEEecCCceeeeee---cCCCCccceE
Q 048118 77 -----------------------FVGHTKDVLSVAFSIDN-RQIVSASRDRTIKLWNTLGECKYTIQ---EGDAHTEWVS 129 (303)
Q Consensus 77 -----------------------~~~h~~~i~~i~~~~~~-~~l~t~~~d~~i~vw~~~~~~~~~~~---~~~~~~~~i~ 129 (303)
+.+|.+.|.++.|+|++ .+|++|+.|+.|++||+......... ....|...|.
T Consensus 130 ~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~ 209 (380)
T 3iz6_a 130 SACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVL 209 (380)
T ss_dssp SCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEE
T ss_pred CcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeE
Confidence 34788899999999974 57999999999999998654332221 1245778899
Q ss_pred EEEEcCCCCCCEEEEEeCCCcEEEEECC-CceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEec
Q 048118 130 CVRFSPNTLQPTIVSASWDRTVKVWNLS-NCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLD 208 (303)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~ 208 (303)
+++|+|.. ...+++|+.|+.|++||++ ..+....+.+|.+.|++++|+|++++|++|+.|++|++||+++++.+..+.
T Consensus 210 ~~~~~~~~-~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~ 288 (380)
T 3iz6_a 210 SLSINSLN-ANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYN 288 (380)
T ss_dssp EEEECSSS-CCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEEC
T ss_pred EEEeecCC-CCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEec
Confidence 99998743 3589999999999999997 456778899999999999999999999999999999999999998877664
Q ss_pred CC--------CeEEEEEEcCCCeEEEEE-cCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEE
Q 048118 209 AG--------AVIHALCFSPNRYWLCAA-TEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNW 279 (303)
Q Consensus 209 ~~--------~~v~~~~~s~~~~~l~~~-~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (303)
.. ..+.+++|+|++.+++++ .||.|++||+..++.+..+.. ....|...+++++|
T Consensus 289 ~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~----------------~~~~h~~~v~~l~~ 352 (380)
T 3iz6_a 289 REPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGT----------------LQNSHEGRISCLGL 352 (380)
T ss_dssp CCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECC----------------SCSSCCCCCCEEEE
T ss_pred ccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEec----------------ccCCCCCceEEEEE
Confidence 31 247899999998766554 689999999988776554321 01234556788999
Q ss_pred cCCCCEEEEeecCCeEEEEeccc
Q 048118 280 SVDGSTLFSGYTDGVIRVWGIGR 302 (303)
Q Consensus 280 sp~~~~l~~gs~Dg~v~~w~~~~ 302 (303)
+|++.+|++|+.||+|++|++..
T Consensus 353 s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 353 SSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp CSSSSEEEEECTTSCEEEEECCS
T ss_pred CCCCCEEEEeeCCCCEEEEecCC
Confidence 99999999999999999999863
No 10
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.3e-40 Score=275.94 Aligned_cols=250 Identities=25% Similarity=0.404 Sum_probs=206.0
Q ss_pred eeecccccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCE
Q 048118 5 LVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDV 84 (303)
Q Consensus 5 ~~~~~~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i 84 (303)
+.+..++++|.+.|++++|+|++ .+|+||+.|++|++||+..... .. .+.+|..+|
T Consensus 3 l~~~~~~~~h~~~V~~~~fsp~~-~~l~s~~~dg~v~lWd~~~~~~-----~~------------------~~~~~~~~v 58 (304)
T 2ynn_A 3 LDIKKTFSNRSDRVKGIDFHPTE-PWVLTTLYSGRVELWNYETQVE-----VR------------------SIQVTETPV 58 (304)
T ss_dssp CCCEEEEEEECSCEEEEEECSSS-SEEEEEETTSEEEEEETTTTEE-----EE------------------EEECCSSCE
T ss_pred ceeEEeecCCCCceEEEEECCCC-CEEEEEcCCCcEEEEECCCCce-----eE------------------EeeccCCcE
Confidence 45667899999999999999975 6899999999999999864321 11 245688899
Q ss_pred EEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCc-eeEE
Q 048118 85 LSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNC-KLRA 163 (303)
Q Consensus 85 ~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~-~~~~ 163 (303)
.+++|+|++.+|++|+.|+.|++||....... .....|...|.+++|+|++ ..+++|+.|+.|++||++++ ....
T Consensus 59 ~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~--~~~~~h~~~v~~~~~~~~~--~~l~sgs~D~~v~lWd~~~~~~~~~ 134 (304)
T 2ynn_A 59 RAGKFIARKNWIIVGSDDFRIRVFNYNTGEKV--VDFEAHPDYIRSIAVHPTK--PYVLSGSDDLTVKLWNWENNWALEQ 134 (304)
T ss_dssp EEEEEEGGGTEEEEEETTSEEEEEETTTCCEE--EEEECCSSCEEEEEECSSS--SEEEEEETTSCEEEEEGGGTTEEEE
T ss_pred EEEEEeCCCCEEEEECCCCEEEEEECCCCcEE--EEEeCCCCcEEEEEEcCCC--CEEEEECCCCeEEEEECCCCcchhh
Confidence 99999999999999999999999998654322 2224688899999999986 58999999999999999876 5667
Q ss_pred EEcCCCCCeeEEEECC-CCCEEEEEeCCCeEEEEeCCCCceEEEec--CCCeEEEEEEcC--CCe-EEEEEcCCcEEEEe
Q 048118 164 TLAGHTGYVNTVAVSP-DGSLCASGGKDGVILLWDLAEGKRLYSLD--AGAVIHALCFSP--NRY-WLCAATEQSIKIWD 237 (303)
Q Consensus 164 ~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~v~iwd~~~~~~~~~~~--~~~~v~~~~~s~--~~~-~l~~~~~~~i~iwd 237 (303)
.+.+|...|.+++|+| ++..|++|+.|++|++||++.+.....+. ....+..++|+| ++. +++++.|+.|++||
T Consensus 135 ~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd 214 (304)
T 2ynn_A 135 TFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWD 214 (304)
T ss_dssp EECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEE
T ss_pred hhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEe
Confidence 7899999999999999 67899999999999999998776655543 346788888987 454 55666799999999
Q ss_pred CCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEeccc
Q 048118 238 LESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIGR 302 (303)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~~ 302 (303)
+++++.+..+ .+|...+..++|+|++++|++|+.||+|++||+..
T Consensus 215 ~~~~~~~~~~--------------------~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~ 259 (304)
T 2ynn_A 215 YQTKSCVATL--------------------EGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSST 259 (304)
T ss_dssp TTTTEEEEEE--------------------ECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred CCCCccceee--------------------CCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 9988766543 33445578899999999999999999999999864
No 11
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=3e-40 Score=280.01 Aligned_cols=285 Identities=23% Similarity=0.338 Sum_probs=220.0
Q ss_pred Cccceeeccccccccc-ceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCc---
Q 048118 1 MAEGLVLKGTMRAHTD-MVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQ--- 76 (303)
Q Consensus 1 ~~~~~~~~~~~~~h~~-~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--- 76 (303)
|-+.+.++.++.+|.+ .|++++|+|++ .+||||+.|++|++|++...... .......+|...|.++.++|+++
T Consensus 1 ~~~~~~~~~~~~~h~~~~v~~l~~sp~g-~~las~~~D~~i~iw~~~~~~~~--~~~~~~~~h~~~v~~~~~sp~g~~l~ 77 (345)
T 3fm0_A 1 MKDSLVLLGRVPAHPDSRCWFLAWNPAG-TLLASCGGDRRIRIWGTEGDSWI--CKSVLSEGHQRTVRKVAWSPCGNYLA 77 (345)
T ss_dssp ---CEEEEEEECCSTTSCEEEEEECTTS-SCEEEEETTSCEEEEEEETTEEE--EEEEECSSCSSCEEEEEECTTSSEEE
T ss_pred CCccEEEeeeecCCCCCcEEEEEECCCC-CEEEEEcCCCeEEEEEcCCCcce--eeeeeccccCCcEEEEEECCCCCEEE
Confidence 7788999999999998 89999999975 68999999999999998654211 11222357888999999998764
Q ss_pred -----------------------eecccCCEEEEEEeeCCCEEEEEeCCCcEEEEecCCcee-eeeecCCCCccceEEEE
Q 048118 77 -----------------------FVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECK-YTIQEGDAHTEWVSCVR 132 (303)
Q Consensus 77 -----------------------~~~h~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~-~~~~~~~~~~~~i~~~~ 132 (303)
+.+|.+.|.+++|+|++.+|++++.|+.|++||+..... ........|...|.+++
T Consensus 78 s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~ 157 (345)
T 3fm0_A 78 SASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVV 157 (345)
T ss_dssp EEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEE
T ss_pred EEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEE
Confidence 237899999999999999999999999999999864322 22333456888899999
Q ss_pred EcCCCCCCEEEEEeCCCcEEEEECCCce--eEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCC---------
Q 048118 133 FSPNTLQPTIVSASWDRTVKVWNLSNCK--LRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEG--------- 201 (303)
Q Consensus 133 ~~~~~~~~~~~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~--------- 201 (303)
|+|++ ..+++++.|+.|++||..+++ +...+.+|...|++++|+|++++|++++.|++|++||....
T Consensus 158 ~~p~~--~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~ 235 (345)
T 3fm0_A 158 WHPSQ--ELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACS 235 (345)
T ss_dssp ECSSS--SCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC
T ss_pred ECCCC--CEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceee
Confidence 99986 479999999999999997764 45678899999999999999999999999999999996322
Q ss_pred ------ceEEEec--CCCeEEEEEEcCCCe-EEEEEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccce
Q 048118 202 ------KRLYSLD--AGAVIHALCFSPNRY-WLCAATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNI 272 (303)
Q Consensus 202 ------~~~~~~~--~~~~v~~~~~s~~~~-~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (303)
+.+.++. ....|.+++|+|++. +++++.|+.|++|+.+......... ..........|..
T Consensus 236 ~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~-----------~~~~~~~~~~h~~ 304 (345)
T 3fm0_A 236 GSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPT-----------FSLTAHLHQAHSQ 304 (345)
T ss_dssp ---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCC-----------EEEEEEETTSSSS
T ss_pred ccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceee-----------EEEEeeecccccC
Confidence 1122222 356799999999875 4456679999999986543110000 0000112345667
Q ss_pred eEEEEEEcCCCC-EEEEeecCCeEEEEecc
Q 048118 273 YCTSLNWSVDGS-TLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 273 ~~~~~~~sp~~~-~l~~gs~Dg~v~~w~~~ 301 (303)
.+++++|+|+++ +|++|+.||+|++|++.
T Consensus 305 ~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~ 334 (345)
T 3fm0_A 305 DVNCVAWNPKEPGLLASCSDDGEVAFWKYQ 334 (345)
T ss_dssp CEEEEEECSSSTTEEEEEETTSCEEEEEEC
T ss_pred cEeEeEEeCCCceEEEEcCCCCcEEEEEec
Confidence 789999999985 99999999999999985
No 12
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.1e-40 Score=275.41 Aligned_cols=275 Identities=18% Similarity=0.279 Sum_probs=209.1
Q ss_pred cceeecccccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeee-c-CCCcceEEEEeCCCCc----
Q 048118 3 EGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRL-T-GHSHFVQDVVLSSDGQ---- 76 (303)
Q Consensus 3 ~~~~~~~~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~-~-~~~~~i~~~~~~~~~~---- 76 (303)
+.+.++..+++|.+.|++++|+|+ +|+||+.|++|++|++..... .....+ . +|...|.++.++|++.
T Consensus 2 ~~~~~~~~~~~h~~~v~~~~~s~~---~las~~~D~~i~lw~~~~~~~---~~~~~~~~~~h~~~v~~v~~sp~~~~las 75 (330)
T 2hes_X 2 ASINLIKSLKLYKEKIWSFDFSQG---ILATGSTDRKIKLVSVKYDDF---TLIDVLDETAHKKAIRSVAWRPHTSLLAA 75 (330)
T ss_dssp -CCEEEEEEECCSSCEEEEEEETT---EEEEEESSSCEEEEECSSSCC---EEEEEECTTCCCSCEEEEEECTTSSEEEE
T ss_pred cccccceeeccCCCceeeeccCCC---EEEEEcCCCEEEEEEecCCCe---EEEEEEecCCccCCEEEEEECCCCCEEEE
Confidence 456778889999999999999864 899999999999999865321 112223 2 3788899998888653
Q ss_pred ---------------------------eecccCCEEEEEEeeCCCEEEEEeCCCcEEEEecCCc--eeeeeecCCCCccc
Q 048118 77 ---------------------------FVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGE--CKYTIQEGDAHTEW 127 (303)
Q Consensus 77 ---------------------------~~~h~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~--~~~~~~~~~~~~~~ 127 (303)
+.+|.+.|.+++|+|++.+|++|+.|+.|++||+... ....+.....|...
T Consensus 76 ~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~ 155 (330)
T 2hes_X 76 GSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQD 155 (330)
T ss_dssp EETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSC
T ss_pred EeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCc
Confidence 2368889999999999999999999999999998421 11222333568889
Q ss_pred eEEEEEcCCCCCCEEEEEeCCCcEEEEECCCc--eeEEEEcCCCCCeeEEEECCC--CCEEEEEeCCCeEEEEeCCCC--
Q 048118 128 VSCVRFSPNTLQPTIVSASWDRTVKVWNLSNC--KLRATLAGHTGYVNTVAVSPD--GSLCASGGKDGVILLWDLAEG-- 201 (303)
Q Consensus 128 i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~v~iwd~~~~-- 201 (303)
|.+++|+|++ ..+++++.|+.|++||..++ ++...+.+|.+.|.+++|+|+ +..|++++.|++|++||++.+
T Consensus 156 v~~v~~~p~~--~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~ 233 (330)
T 2hes_X 156 VKHVIWHPSE--ALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDE 233 (330)
T ss_dssp EEEEEECSSS--SEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECT
T ss_pred eEEEEECCCC--CEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCc
Confidence 9999999985 58999999999999998765 577889999999999999998 678999999999999998754
Q ss_pred ------ceEEEec--CCCeEEEEEEcCCCeEEEEEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccce-
Q 048118 202 ------KRLYSLD--AGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNI- 272 (303)
Q Consensus 202 ------~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 272 (303)
..+..+. ....|.+++|++++.+++++.|+.|++||.++++...... ....+..
T Consensus 234 ~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~~~~~~~-----------------~~~~h~~~ 296 (330)
T 2hes_X 234 DDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDGEWKVFAK-----------------RALCHGVY 296 (330)
T ss_dssp TSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETTEEEEEEE-----------------ESCTTTTS
T ss_pred cccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCceEEEec-----------------cccccccc
Confidence 2333333 4578999999998888888899999999987653110000 0122333
Q ss_pred eEEEEEEcC--CCCEEEEeecCCeEEEEeccc
Q 048118 273 YCTSLNWSV--DGSTLFSGYTDGVIRVWGIGR 302 (303)
Q Consensus 273 ~~~~~~~sp--~~~~l~~gs~Dg~v~~w~~~~ 302 (303)
.+.+++|+| ++.+|++|+.||+|++|++..
T Consensus 297 ~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 297 EINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp CEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred eEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 567899999 688999999999999999864
No 13
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=269.02 Aligned_cols=244 Identities=20% Similarity=0.246 Sum_probs=195.0
Q ss_pred ccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEeeC
Q 048118 13 AHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSID 92 (303)
Q Consensus 13 ~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~~ 92 (303)
.|...|++++|+|+ +.|++|+.||+|++||+...+...... ....+|.+.|.+++|+|+
T Consensus 80 ~~~~~v~~~~~s~d--~~l~~~s~dg~v~lWd~~~~~~~~~~~-------------------~~~~~H~~~V~~v~~spd 138 (344)
T 4gqb_B 80 QTEAGVADLTWVGE--RGILVASDSGAVELWELDENETLIVSK-------------------FCKYEHDDIVSTVSVLSS 138 (344)
T ss_dssp EESSCEEEEEEETT--TEEEEEETTSEEEEEEECTTSSCEEEE-------------------EEEECCSSCEEEEEECTT
T ss_pred ccCCCEEEEEEeCC--CeEEEEECCCEEEEEeccCCCceeEee-------------------ccccCCCCCEEEEEECCC
Confidence 35567999999985 479999999999999997543211000 123579999999999999
Q ss_pred CCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEEEc--CCCC
Q 048118 93 NRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLA--GHTG 170 (303)
Q Consensus 93 ~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~--~~~~ 170 (303)
+++|++|+.|+.|++||+..... +.....|...|.+++|+|++ ...+++++.|+.|++||+++++....+. .+..
T Consensus 139 g~~l~sgs~d~~i~iwd~~~~~~--~~~~~~h~~~V~~~~~~~~~-~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~ 215 (344)
T 4gqb_B 139 GTQAVSGSKDICIKVWDLAQQVV--LSSYRAHAAQVTCVAASPHK-DSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGY 215 (344)
T ss_dssp SSEEEEEETTSCEEEEETTTTEE--EEEECCCSSCEEEEEECSSC-TTEEEEEETTSCEEEEETTSSSCEEECC----CC
T ss_pred CCEEEEEeCCCeEEEEECCCCcE--EEEEcCcCCceEEEEecCCC-CCceeeeccccccccccccccceeeeeecceeec
Confidence 99999999999999999865433 23335788999999999986 3478999999999999999988777664 3456
Q ss_pred CeeEEEECCC-CCEEEEEeCCCeEEEEeCCCCceEEEec-CCCeEEEEEEcCCC-eEE-EEEcCCcEEEEeCCCCceeee
Q 048118 171 YVNTVAVSPD-GSLCASGGKDGVILLWDLAEGKRLYSLD-AGAVIHALCFSPNR-YWL-CAATEQSIKIWDLESKSIVED 246 (303)
Q Consensus 171 ~i~~~~~~~~-~~~l~~~~~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~-~~l-~~~~~~~i~iwd~~~~~~~~~ 246 (303)
.+.+++|+|+ +++|++|+.||+|++||+++++.+.++. +...|.+++|+|++ .+| +++.|+.|++||+++++++.
T Consensus 216 ~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~- 294 (344)
T 4gqb_B 216 LPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFR- 294 (344)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEE-
T ss_pred cceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEE-
Confidence 7899999994 5688999999999999999999888875 46789999999987 445 46679999999998876532
Q ss_pred eeeccccccccccCccceeeccccceeEEEEEEcCCCC-EEEEeecCCeEEEEecc
Q 048118 247 LKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGS-TLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~-~l~~gs~Dg~v~~w~~~ 301 (303)
+.+|...+++++|+|+++ +|++||.||+|++|++.
T Consensus 295 --------------------~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~ 330 (344)
T 4gqb_B 295 --------------------SQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVP 330 (344)
T ss_dssp --------------------ECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC
T ss_pred --------------------EcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECC
Confidence 234556788999999986 57799999999999985
No 14
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.2e-38 Score=271.29 Aligned_cols=265 Identities=18% Similarity=0.240 Sum_probs=209.4
Q ss_pred ccccccceeeeecCCCCCcEEEEecC------CCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCce-------
Q 048118 11 MRAHTDMVTAIATPIDNSDMIVTASR------DKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQF------- 77 (303)
Q Consensus 11 ~~~h~~~v~~v~~~~~~~~~~~t~s~------d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~------- 77 (303)
..+|.+.|++++|+|++ .+|||||. |+.+++|+.......... ......|...|.++.|+|++.+
T Consensus 38 p~~H~~~V~~v~fSpDG-~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~-~~~~~~~~~~V~~~~~s~d~~~l~~s~dg 115 (357)
T 4g56_B 38 PACMEVQIGAVRYRRDG-ALLLAASSLSSRTWGGSIWVFKDPEGAPNESL-CTAGVQTEAGVTDVAWVSEKGILVASDSG 115 (357)
T ss_dssp --CCCSEEEEEEECSSS-CEEEEEECSSSSSCCEEEEEESSCC---CGGG-CSEEEECSSCEEEEEEETTTEEEEEETTS
T ss_pred cccccCCEEEEEECCCC-CEEEEEcCCCCccccCeEEEEECCCCCcceeE-ecccCCCCCCEEEEEEcCCCCEEEEECCC
Confidence 45799999999999986 69999998 678999987654332222 2223356677888888876532
Q ss_pred --------------------ecccCCEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCC
Q 048118 78 --------------------VGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNT 137 (303)
Q Consensus 78 --------------------~~h~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 137 (303)
.+|.+.|.+++|+|++++|++++.|+.|++||....... .....|...|.+++|+|++
T Consensus 116 ~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~--~~~~~h~~~v~~v~~s~~~ 193 (357)
T 4g56_B 116 AVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVL--KSYNAHSSEVNCVAACPGK 193 (357)
T ss_dssp CEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEE--EEECCCSSCEEEEEECTTC
T ss_pred EEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEE--EEEcCCCCCEEEEEEccCC
Confidence 268899999999999999999999999999998654332 2235688899999999976
Q ss_pred CCCEEEEEeCCCcEEEEECCCceeEEEE--cCCCCCeeEEEECCCC-CEEEEEeCCCeEEEEeCCCCceEEEec-CCCeE
Q 048118 138 LQPTIVSASWDRTVKVWNLSNCKLRATL--AGHTGYVNTVAVSPDG-SLCASGGKDGVILLWDLAEGKRLYSLD-AGAVI 213 (303)
Q Consensus 138 ~~~~~~~~~~dg~i~iwd~~~~~~~~~~--~~~~~~i~~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~-~~~~v 213 (303)
. ..+++++.|+.|++||+++++....+ ..+...+++++|+|++ .+|++|+.|+.|++||+++++.+..+. ....|
T Consensus 194 ~-~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v 272 (357)
T 4g56_B 194 D-TIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNI 272 (357)
T ss_dssp S-SCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCE
T ss_pred C-ceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeE
Confidence 3 46899999999999999887765443 3466789999999974 688999999999999999998887775 45789
Q ss_pred EEEEEcCCC-eEEE-EEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcC-CCCEEEEee
Q 048118 214 HALCFSPNR-YWLC-AATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSV-DGSTLFSGY 290 (303)
Q Consensus 214 ~~~~~s~~~-~~l~-~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp-~~~~l~~gs 290 (303)
.+++|+|++ .+|+ ++.|+.|++||+++++.+..+ +|...+++++|+| ++.+|++|+
T Consensus 273 ~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~---------------------~H~~~V~~vafsP~d~~~l~s~s 331 (357)
T 4g56_B 273 TGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL---------------------SHRDFVTGVAWSPLDHSKFTTVG 331 (357)
T ss_dssp EEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC---------------------CCSSCEEEEEECSSSTTEEEEEE
T ss_pred EEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC---------------------CCCCCEEEEEEeCCCCCEEEEEc
Confidence 999999986 4554 567999999999988765422 2445678999999 789999999
Q ss_pred cCCeEEEEecc
Q 048118 291 TDGVIRVWGIG 301 (303)
Q Consensus 291 ~Dg~v~~w~~~ 301 (303)
.||+|++|++.
T Consensus 332 ~Dg~v~iW~~~ 342 (357)
T 4g56_B 332 WDHKVLHHHLP 342 (357)
T ss_dssp TTSCEEEEECC
T ss_pred CCCeEEEEECC
Confidence 99999999985
No 15
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=3e-38 Score=262.32 Aligned_cols=256 Identities=19% Similarity=0.301 Sum_probs=196.3
Q ss_pred ccccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEE
Q 048118 9 GTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVA 88 (303)
Q Consensus 9 ~~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~ 88 (303)
..+.+|.+.|++++|+|++ ++||||+.|++|++|++...... .. ..+.+|.++|.+++
T Consensus 3 ~~~~~h~~~V~~~~~s~~g-~~las~s~D~~v~iw~~~~~~~~---~~------------------~~l~gH~~~V~~v~ 60 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYG-KRMATCSSDKTIKIFEVEGETHK---LI------------------DTLTGHEGPVWRVD 60 (297)
T ss_dssp EECCSCSSCEEEEEECTTS-SEEEEEETTSCEEEEEBCSSCBC---CC------------------EEECCCSSCEEEEE
T ss_pred eeccCCcCceEEEEECCCC-CEEEEEeCCCEEEEEecCCCCcE---EE------------------EEEccccCCeEEEE
Confidence 3578999999999999875 68999999999999998632110 01 13568999999999
Q ss_pred EeeC--CCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCce--eEEE
Q 048118 89 FSID--NRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCK--LRAT 164 (303)
Q Consensus 89 ~~~~--~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~--~~~~ 164 (303)
|+++ +.+|++|+.|+.|++||..............|...|.+++|+|+.....+++++.|+.|++||+++.. ....
T Consensus 61 ~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~ 140 (297)
T 2pm7_B 61 WAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPII 140 (297)
T ss_dssp ECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEE
T ss_pred ecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeee
Confidence 9863 88999999999999999864321122223457888999999997323589999999999999997653 2456
Q ss_pred EcCCCCCeeEEEECCC-------------CCEEEEEeCCCeEEEEeCCCCc----eEEEec-CCCeEEEEEEcCCC---e
Q 048118 165 LAGHTGYVNTVAVSPD-------------GSLCASGGKDGVILLWDLAEGK----RLYSLD-AGAVIHALCFSPNR---Y 223 (303)
Q Consensus 165 ~~~~~~~i~~~~~~~~-------------~~~l~~~~~d~~v~iwd~~~~~----~~~~~~-~~~~v~~~~~s~~~---~ 223 (303)
+.+|...|.+++|+|+ +++|++|+.|++|++||+++++ .+..+. +...|.+++|+|++ .
T Consensus 141 ~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~ 220 (297)
T 2pm7_B 141 IDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRS 220 (297)
T ss_dssp EECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSE
T ss_pred eecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCce
Confidence 7789999999999997 5799999999999999998765 344443 45789999999984 5
Q ss_pred EE-EEEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEecc
Q 048118 224 WL-CAATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 224 ~l-~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~ 301 (303)
++ +++.|+.|++||++.......... .....+...+.+++|+|++++|++|+.||+|++|+..
T Consensus 221 ~las~s~D~~v~iWd~~~~~~~~~~~~---------------~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 221 YMASVSQDRTCIIWTQDNEQGPWKKTL---------------LKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp EEEEEETTSCEEEEEESSTTSCCEEEE---------------SSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred EEEEEECCCcEEEEEeCCCCCccceee---------------eecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 55 456799999999876421100000 0001233457889999999999999999999999875
No 16
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=6.8e-37 Score=255.62 Aligned_cols=270 Identities=26% Similarity=0.449 Sum_probs=215.1
Q ss_pred ceeecccccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCC
Q 048118 4 GLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKD 83 (303)
Q Consensus 4 ~~~~~~~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~ 83 (303)
+..+..++.+|.+.|++++|+|++ ++|++|+.|+.|++|+...... .. .+.+|...
T Consensus 12 ~~~~~~~~~gh~~~v~~~~~s~~~-~~l~s~~~dg~i~iw~~~~~~~-----~~------------------~~~~h~~~ 67 (312)
T 4ery_A 12 NYALKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKF-----EK------------------TISGHKLG 67 (312)
T ss_dssp CCEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCE-----EE------------------EECCCSSC
T ss_pred CceeEEEEcccCCcEEEEEECCCC-CEEEEeeCCCeEEEEeCCCccc-----ch------------------hhccCCCc
Confidence 345677899999999999999875 6899999999999999864321 11 23568889
Q ss_pred EEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEE
Q 048118 84 VLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRA 163 (303)
Q Consensus 84 i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~ 163 (303)
|.+++|+|++.+|++++.|+.|++||+...... .....|...|.+++|+|++ ..+++++.|+.|++||+++++...
T Consensus 68 v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~--~~~~~~~~~v~~~~~~~~~--~~l~s~~~d~~i~iwd~~~~~~~~ 143 (312)
T 4ery_A 68 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL--KTLKGHSNYVFCCNFNPQS--NLIVSGSFDESVRIWDVKTGKCLK 143 (312)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTCCEE--EEEECCSSCEEEEEECSSS--SEEEEEETTSCEEEEETTTCCEEE
T ss_pred eEEEEEcCCCCEEEEECCCCEEEEEECCCCcEE--EEEcCCCCCEEEEEEcCCC--CEEEEEeCCCcEEEEECCCCEEEE
Confidence 999999999999999999999999998654322 2223577889999999985 589999999999999999999999
Q ss_pred EEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEec--CCCeEEEEEEcCCCeEEE-EEcCCcEEEEeCCC
Q 048118 164 TLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLD--AGAVIHALCFSPNRYWLC-AATEQSIKIWDLES 240 (303)
Q Consensus 164 ~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~-~~~~~~i~iwd~~~ 240 (303)
.+..|..+|.+++|+|++++|++++.|+.|++||+++++.+..+. ....+..++|+|++.+++ ++.|+.|++||+++
T Consensus 144 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 223 (312)
T 4ery_A 144 TLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK 223 (312)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTT
T ss_pred EecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 999999999999999999999999999999999999998877663 346789999999986554 55699999999998
Q ss_pred Cceeeeeeeccccc-----------c-------cc-------ccCccceeeccccceeEEEEEEcCCCCEEEEee--cCC
Q 048118 241 KSIVEDLKVDLKTE-----------A-------EK-------SEATTATTTIKKKNIYCTSLNWSVDGSTLFSGY--TDG 293 (303)
Q Consensus 241 ~~~~~~~~~~~~~~-----------~-------~~-------~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs--~Dg 293 (303)
++.+..+..+.... . .. .........+.+|...+.+++|+|++++|++++ .||
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~ 303 (312)
T 4ery_A 224 GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDK 303 (312)
T ss_dssp TEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTC
T ss_pred CcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCc
Confidence 87765543211100 0 00 000111234455666788999999999999987 699
Q ss_pred eEEEEecc
Q 048118 294 VIRVWGIG 301 (303)
Q Consensus 294 ~v~~w~~~ 301 (303)
+|++|+..
T Consensus 304 ~i~~W~~d 311 (312)
T 4ery_A 304 TIKLWKSD 311 (312)
T ss_dssp CEEEEECC
T ss_pred cEEEecCC
Confidence 99999864
No 17
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=4.4e-37 Score=279.43 Aligned_cols=266 Identities=23% Similarity=0.316 Sum_probs=218.9
Q ss_pred ecccccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCc----------
Q 048118 7 LKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQ---------- 76 (303)
Q Consensus 7 ~~~~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---------- 76 (303)
....+.+|.+.|++++|+|++ .+||||+.|++|++||+...+. .....+.+|...|.++.|+|+++
T Consensus 51 ~~~~~~~h~~~v~~~~~spdg-~~lasg~~d~~v~lWd~~~~~~---~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~ 126 (611)
T 1nr0_A 51 DTEIYTEHSHQTTVAKTSPSG-YYCASGDVHGNVRIWDTTQTTH---ILKTTIPVFSGPVKDISWDSESKRIAAVGEGRE 126 (611)
T ss_dssp CCEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEESSSTTC---CEEEEEECSSSCEEEEEECTTSCEEEEEECCSS
T ss_pred cCeEecCCCCceEEEEECCCC-cEEEEEeCCCCEEEeECCCCcc---eeeEeecccCCceEEEEECCCCCEEEEEECCCC
Confidence 445688999999999999975 6999999999999999864321 23345677888999999998764
Q ss_pred ----------------eecccCCEEEEEEeeCCC-EEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCC
Q 048118 77 ----------------FVGHTKDVLSVAFSIDNR-QIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQ 139 (303)
Q Consensus 77 ----------------~~~h~~~i~~i~~~~~~~-~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 139 (303)
+.+|.+.|.+++|+|++. +|++++.|+.|++||...... ......|...|.+++|+|++
T Consensus 127 ~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~--~~~l~~H~~~V~~v~fspdg-- 202 (611)
T 1nr0_A 127 RFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKF--KSTFGEHTKFVHSVRYNPDG-- 202 (611)
T ss_dssp CSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEE--EEEECCCSSCEEEEEECTTS--
T ss_pred ceeEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeE--eeeeccccCceEEEEECCCC--
Confidence 347889999999999987 699999999999999754322 22335688899999999986
Q ss_pred CEEEEEeCCCcEEEEECCCceeEEEEc-------CCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEecCC--
Q 048118 140 PTIVSASWDRTVKVWNLSNCKLRATLA-------GHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAG-- 210 (303)
Q Consensus 140 ~~~~~~~~dg~i~iwd~~~~~~~~~~~-------~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~-- 210 (303)
..+++++.|+.|++||+.+++....+. +|.+.|.+++|+|++++|++++.|++|++||+++++.+.++...
T Consensus 203 ~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~ 282 (611)
T 1nr0_A 203 SLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTR 282 (611)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSS
T ss_pred CEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCC
Confidence 589999999999999999888877774 79999999999999999999999999999999999888776432
Q ss_pred --CeEEEEEEcCCCeEEEEEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEE
Q 048118 211 --AVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFS 288 (303)
Q Consensus 211 --~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~ 288 (303)
.....+.|. ...+++++.++.|++||.+.++.... +.+|...+++++|+|++++|++
T Consensus 283 ~~~~~~~~~~~-~~~l~s~s~d~~i~~~~~~~~~~~~~--------------------~~gh~~~v~~l~~spdg~~l~s 341 (611)
T 1nr0_A 283 IEDQQLGIIWT-KQALVSISANGFINFVNPELGSIDQV--------------------RYGHNKAITALSSSADGKTLFS 341 (611)
T ss_dssp GGGCEEEEEEC-SSCEEEEETTCCEEEEETTTTEEEEE--------------------ECCCSSCEEEEEECTTSSEEEE
T ss_pred ccceeEEEEEc-CCEEEEEeCCCcEEEEeCCCCCcceE--------------------EcCCCCCEEEEEEeCCCCEEEE
Confidence 245566673 45677788899999999887654322 2345566889999999999999
Q ss_pred eecCCeEEEEecc
Q 048118 289 GYTDGVIRVWGIG 301 (303)
Q Consensus 289 gs~Dg~v~~w~~~ 301 (303)
|+.||+|++||+.
T Consensus 342 ~s~D~~v~~Wd~~ 354 (611)
T 1nr0_A 342 ADAEGHINSWDIS 354 (611)
T ss_dssp EETTSCEEEEETT
T ss_pred EeCCCcEEEEECC
Confidence 9999999999975
No 18
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=8e-37 Score=277.75 Aligned_cols=268 Identities=22% Similarity=0.349 Sum_probs=210.9
Q ss_pred ccccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCce-----------
Q 048118 9 GTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQF----------- 77 (303)
Q Consensus 9 ~~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----------- 77 (303)
.++.+|.+.|++++|+|++..+|++|+.|++|++|+.... .....+.+|...|.++.++|++++
T Consensus 141 ~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~-----~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~ 215 (611)
T 1nr0_A 141 GNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPF-----KFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIV 215 (611)
T ss_dssp BCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTB-----EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred ceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCC-----eEeeeeccccCceEEEEECCCCCEEEEEECCCcEE
Confidence 4688999999999999987667999999999999997542 345567889999999999998642
Q ss_pred --------------e------cccCCEEEEEEeeCCCEEEEEeCCCcEEEEecCCceee-ee------------------
Q 048118 78 --------------V------GHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKY-TI------------------ 118 (303)
Q Consensus 78 --------------~------~h~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~-~~------------------ 118 (303)
. +|.+.|.+++|+|++++|++++.|+.|++||+...... .+
T Consensus 216 lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (611)
T 1nr0_A 216 LYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQ 295 (611)
T ss_dssp EEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSS
T ss_pred EEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCC
Confidence 1 69999999999999999999999999999997532111 10
Q ss_pred ----------------------ecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEEE-c---------
Q 048118 119 ----------------------QEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATL-A--------- 166 (303)
Q Consensus 119 ----------------------~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~-~--------- 166 (303)
.....|...|.+++|+|++ ..+++++.|+.|++||+.+++....+ .
T Consensus 296 ~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg--~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~ 373 (611)
T 1nr0_A 296 ALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADG--KTLFSADAEGHINSWDISTGISNRVFPDVHATMITGI 373 (611)
T ss_dssp CEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTS--SEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEE
T ss_pred EEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCC--CEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEE
Confidence 1123578889999999986 57999999999999998765432211 0
Q ss_pred ------------------------------------------------------------------------CCCCCeeE
Q 048118 167 ------------------------------------------------------------------------GHTGYVNT 174 (303)
Q Consensus 167 ------------------------------------------------------------------------~~~~~i~~ 174 (303)
.|...+.+
T Consensus 374 ~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~ 453 (611)
T 1nr0_A 374 KTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSC 453 (611)
T ss_dssp EECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEE
T ss_pred EECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceE
Confidence 02234678
Q ss_pred EEECCCCCEEEEEeCCCeEEEEeCCCCce--EEEecCCCeEEEEEEcCCCeEEEE-EcCCcEEEEeCCC-Cceeeeeeec
Q 048118 175 VAVSPDGSLCASGGKDGVILLWDLAEGKR--LYSLDAGAVIHALCFSPNRYWLCA-ATEQSIKIWDLES-KSIVEDLKVD 250 (303)
Q Consensus 175 ~~~~~~~~~l~~~~~d~~v~iwd~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~-~~~~~i~iwd~~~-~~~~~~~~~~ 250 (303)
++|+|++++|++|+.|++|++||+.+++. +....+...|.+++|+|++.+|++ +.|+.|++||+.+ ++++..
T Consensus 454 va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~---- 529 (611)
T 1nr0_A 454 VALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHT---- 529 (611)
T ss_dssp EEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCC----
T ss_pred EEEeCCCCEEEEeCCCCeEEEEEccCCceeeeeccCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeee----
Confidence 99999999999999999999999987643 233456678999999999877665 5689999999876 332211
Q ss_pred cccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEecc
Q 048118 251 LKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~ 301 (303)
.....|...+++++|+|++++|++|+.||+|++|++.
T Consensus 530 --------------~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~ 566 (611)
T 1nr0_A 530 --------------NSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMN 566 (611)
T ss_dssp --------------CCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred --------------eeeeecccceeEEEECCCCCEEEEEECCCcEEEEECC
Confidence 0112255668899999999999999999999999985
No 19
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=5.1e-38 Score=263.16 Aligned_cols=254 Identities=20% Similarity=0.291 Sum_probs=189.7
Q ss_pred cccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEE
Q 048118 10 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAF 89 (303)
Q Consensus 10 ~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~ 89 (303)
.+.+|.+.|++++|+|++ ++||||+.|++|++||+...... .. ..+.+|.+.|.+++|
T Consensus 8 ~~~~H~~~V~~v~~s~~g-~~lasgs~D~~v~lwd~~~~~~~---~~------------------~~l~gH~~~V~~v~~ 65 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYG-TRLATCSSDRSVKIFDVRNGGQI---LI------------------ADLRGHEGPVWQVAW 65 (316)
T ss_dssp ------CCEEEEEECGGG-CEEEEEETTTEEEEEEEETTEEE---EE------------------EEEECCSSCEEEEEE
T ss_pred ecccccCeEEEeeEcCCC-CEEEEEeCCCeEEEEEecCCCcE---EE------------------EEEcCCCccEEEEEe
Confidence 478999999999999875 68999999999999998643210 00 135689999999999
Q ss_pred ee--CCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCce---eEEE
Q 048118 90 SI--DNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCK---LRAT 164 (303)
Q Consensus 90 ~~--~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~---~~~~ 164 (303)
++ ++.+|++|+.|+.|++||..............|...|.+++|+|+.....+++++.|+.|++||++... ....
T Consensus 66 ~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~ 145 (316)
T 3bg1_A 66 AHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKI 145 (316)
T ss_dssp CCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCB
T ss_pred CCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeee
Confidence 86 488999999999999999865321222233467888999999997434579999999999999997653 2344
Q ss_pred EcCCCCCeeEEEECCC-----------------CCEEEEEeCCCeEEEEeCCCC---ceEEEec-CCCeEEEEEEcCCC-
Q 048118 165 LAGHTGYVNTVAVSPD-----------------GSLCASGGKDGVILLWDLAEG---KRLYSLD-AGAVIHALCFSPNR- 222 (303)
Q Consensus 165 ~~~~~~~i~~~~~~~~-----------------~~~l~~~~~d~~v~iwd~~~~---~~~~~~~-~~~~v~~~~~s~~~- 222 (303)
+.+|...+.+++|+|+ +++|++|+.|++|++||++.+ +.+..+. +...|.+++|+|++
T Consensus 146 ~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~ 225 (316)
T 3bg1_A 146 NNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIG 225 (316)
T ss_dssp TTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSS
T ss_pred eccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCC
Confidence 5678899999999997 468999999999999999754 2444443 45689999999985
Q ss_pred ---e-EEEEEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEE
Q 048118 223 ---Y-WLCAATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVW 298 (303)
Q Consensus 223 ---~-~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w 298 (303)
. +++++.|+.|++||++....... . ...+..+...+.+++|+|++++|++|+.||+|++|
T Consensus 226 ~~~~~las~s~D~~v~iw~~~~~~~~~~-~---------------~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw 289 (316)
T 3bg1_A 226 LPTSTIASCSQDGRVFIWTCDDASSNTW-S---------------PKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLW 289 (316)
T ss_dssp CSCCEEEEEETTCEEEEEECSSTTCCCC-B---------------CCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEE
T ss_pred CCCceEEEEcCCCeEEEEEccCccccch-h---------------hhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEE
Confidence 4 45566799999999875311000 0 00112234467889999999999999999999999
Q ss_pred ecc
Q 048118 299 GIG 301 (303)
Q Consensus 299 ~~~ 301 (303)
+..
T Consensus 290 ~~~ 292 (316)
T 3bg1_A 290 KES 292 (316)
T ss_dssp EEC
T ss_pred EEC
Confidence 964
No 20
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.6e-36 Score=260.38 Aligned_cols=274 Identities=17% Similarity=0.252 Sum_probs=211.5
Q ss_pred ceeecccccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCC
Q 048118 4 GLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKD 83 (303)
Q Consensus 4 ~~~~~~~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~ 83 (303)
.+.+...+.+|.+.|++++|+|++..+|++|+.|+.|++|++....... .+ ...+|.+.
T Consensus 62 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~-----~~----------------~~~~h~~~ 120 (383)
T 3ei3_B 62 SYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTS-----FI----------------QGMGPGDA 120 (383)
T ss_dssp TCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEE-----EE----------------CCCSTTCB
T ss_pred ccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccce-----ee----------------ecCCcCCc
Confidence 4566778899999999999999876799999999999999987543210 00 12368899
Q ss_pred EEEEEEee-CCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeE
Q 048118 84 VLSVAFSI-DNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLR 162 (303)
Q Consensus 84 i~~i~~~~-~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~ 162 (303)
|.+++|+| ++.+|++++.|+.|++||+.+...........+...|.+++|+|++ ..+++++.|+.|++||+ +++..
T Consensus 121 v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~i~d~-~~~~~ 197 (383)
T 3ei3_B 121 ITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSR--QMLATGDSTGRLLLLGL-DGHEI 197 (383)
T ss_dssp EEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTT--TEEEEEETTSEEEEEET-TSCEE
T ss_pred eeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCC--CEEEEECCCCCEEEEEC-CCCEE
Confidence 99999999 6789999999999999999875554454444566789999999986 58999999999999999 56677
Q ss_pred EEEcCCCCCeeEEEECCCCC-EEEEEeCCCeEEEEeCCC----CceEEEecCCCeEEEEEEcC-CCeEEE-EEcCCcEEE
Q 048118 163 ATLAGHTGYVNTVAVSPDGS-LCASGGKDGVILLWDLAE----GKRLYSLDAGAVIHALCFSP-NRYWLC-AATEQSIKI 235 (303)
Q Consensus 163 ~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~v~iwd~~~----~~~~~~~~~~~~v~~~~~s~-~~~~l~-~~~~~~i~i 235 (303)
..+.+|...|.+++|+|+++ +|++++.|+.|++||+++ +..+..+.....+.+++|+| ++.+++ ++.|+.|++
T Consensus 198 ~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~i 277 (383)
T 3ei3_B 198 FKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRV 277 (383)
T ss_dssp EEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEE
T ss_pred EEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEE
Confidence 88899999999999999998 999999999999999987 66677777788999999999 886555 556899999
Q ss_pred EeCCCCceeeeeeeccccc-------------------------c-----ccc-------cCccceeeccc--cceeEEE
Q 048118 236 WDLESKSIVEDLKVDLKTE-------------------------A-----EKS-------EATTATTTIKK--KNIYCTS 276 (303)
Q Consensus 236 wd~~~~~~~~~~~~~~~~~-------------------------~-----~~~-------~~~~~~~~~~~--~~~~~~~ 276 (303)
||+++++.+..+....... . ... ........+.. +...+..
T Consensus 278 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~ 357 (383)
T 3ei3_B 278 YSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQLLLNDKRTIDIYDANSGGLVHQLRDPNAAGIISL 357 (383)
T ss_dssp EETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTTCTTCCCCEEEEETTTCCEEEEECBTTBCSCCCE
T ss_pred EECCCCccccccccccccccccccceEEeccCCCCceEEEecCCcccccCCCCeEEEEecCCCceeeeecCCCCCceEEE
Confidence 9998876654443111000 0 000 00001112222 2334456
Q ss_pred EEEcCCCCEEEEeecCCeEEEEeccc
Q 048118 277 LNWSVDGSTLFSGYTDGVIRVWGIGR 302 (303)
Q Consensus 277 ~~~sp~~~~l~~gs~Dg~v~~w~~~~ 302 (303)
++|+|++++|++|+ ||.|++||+..
T Consensus 358 ~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 358 NKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp EEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred EEEecCccEEEEec-CCcEEEEecCC
Confidence 79999999999997 99999999864
No 21
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=6.3e-36 Score=269.76 Aligned_cols=258 Identities=36% Similarity=0.589 Sum_probs=213.6
Q ss_pred ecccccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCc----------
Q 048118 7 LKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQ---------- 76 (303)
Q Consensus 7 ~~~~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---------- 76 (303)
+...+.+|...|++++++|++ .+|++++.|++|++|+.... ....+.+|...+.++.++|+++
T Consensus 295 ~~~~~~~h~~~v~~~~~~~~~-~~l~t~~~d~~i~~w~~~~~------~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~ 367 (577)
T 2ymu_A 295 LLQTLTGHSSSVWGVAFSPDG-QTIASASDDKTVKLWNRNGQ------HLQTLTGHSSSVWGVAFSPDGQTIASASDDKT 367 (577)
T ss_dssp EEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTSC------EEEEECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEEEEecCCCCeEEEEECCCC-CEEEEEeCCCeEEEEeCCCC------eeEEEeCCCCCEEEEEECCCCCEEEEEeCCCE
Confidence 344678999999999999875 68999999999999997532 2345667788888888888764
Q ss_pred -------------eecccCCEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEE
Q 048118 77 -------------FVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIV 143 (303)
Q Consensus 77 -------------~~~h~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 143 (303)
+.+|...|.+++|+|++++|++++.|+.|++|+..+...... ..|...|.+++|+|++ ..++
T Consensus 368 v~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~---~~~~~~v~~~~~s~d~--~~l~ 442 (577)
T 2ymu_A 368 VKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTL---TGHSSSVWGVAFSPDD--QTIA 442 (577)
T ss_dssp EEEEETTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTCCEEEEE---ECCSSCEEEEEECTTS--SEEE
T ss_pred EEEEcCCCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEe---cCCCCCeEEEEECCCC--CEEE
Confidence 247889999999999999999999999999999765433222 3577889999999986 5799
Q ss_pred EEeCCCcEEEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEec-CCCeEEEEEEcCCC
Q 048118 144 SASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLD-AGAVIHALCFSPNR 222 (303)
Q Consensus 144 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~ 222 (303)
+++.|+.|++||. +++....+.+|...|++++|+|++++|++++.|++|++||. +++.+..+. +...|.+++|+|++
T Consensus 443 ~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg 520 (577)
T 2ymu_A 443 SASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDG 520 (577)
T ss_dssp EEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTS
T ss_pred EEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCC
Confidence 9999999999996 56677788999999999999999999999999999999995 566666664 46789999999998
Q ss_pred eEEE-EEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEe
Q 048118 223 YWLC-AATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWG 299 (303)
Q Consensus 223 ~~l~-~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~ 299 (303)
.+|+ ++.|+.|++||. +++.+.. +.+|...+++++|+||+++|+||+.||+|++||
T Consensus 521 ~~l~s~~~dg~v~lwd~-~~~~~~~--------------------~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 521 QTIASASDDKTVKLWNR-NGQLLQT--------------------LTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp SCEEEEETTSEEEEECT-TSCEEEE--------------------EECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CEEEEEECcCEEEEEeC-CCCEEEE--------------------EcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 7665 556899999996 4444332 234556678999999999999999999999997
No 22
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=4.4e-37 Score=268.56 Aligned_cols=215 Identities=18% Similarity=0.269 Sum_probs=172.5
Q ss_pred ecccccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEE
Q 048118 7 LKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLS 86 (303)
Q Consensus 7 ~~~~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~ 86 (303)
+.....+|...|++|+|+|.++.+||+|+.||+|+|||+...+... . -.+.+|.+.|.+
T Consensus 111 ~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~---~------------------~~~~gH~~~V~~ 169 (435)
T 4e54_B 111 ILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPT---F------------------IKGIGAGGSITG 169 (435)
T ss_dssp SCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCE---E------------------ECCCSSSCCCCE
T ss_pred ecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCcee---E------------------EEccCCCCCEEE
Confidence 4445677888999999999878899999999999999986433210 0 024579999999
Q ss_pred EEEee-CCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEEE
Q 048118 87 VAFSI-DNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATL 165 (303)
Q Consensus 87 i~~~~-~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~ 165 (303)
++|+| ++.+|++++.|++|++||+.+...........+...+.+++|+|++ ..+++|+.||.|++||++. +....+
T Consensus 170 l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~g~~dg~i~~wd~~~-~~~~~~ 246 (435)
T 4e54_B 170 LKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASS--RMVVTGDNVGNVILLNMDG-KELWNL 246 (435)
T ss_dssp EEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTT--TEEEEECSSSBEEEEESSS-CBCCCS
T ss_pred EEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCC--CEEEEEeCCCcEeeeccCc-ceeEEE
Confidence 99998 6889999999999999999765544444444455567889999986 5899999999999999865 445667
Q ss_pred cCCCCCeeEEEECCCCC-EEEEEeCCCeEEEEeCCCCceEEEe----cCCCeEEEEEEcCCCeEEE-EEcCCcEEEEeCC
Q 048118 166 AGHTGYVNTVAVSPDGS-LCASGGKDGVILLWDLAEGKRLYSL----DAGAVIHALCFSPNRYWLC-AATEQSIKIWDLE 239 (303)
Q Consensus 166 ~~~~~~i~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~----~~~~~v~~~~~s~~~~~l~-~~~~~~i~iwd~~ 239 (303)
.+|...|++++|+|+++ +|++++.|++|++||+++.+....+ .+...|.+++|+|++.+|+ ++.|+.|++||++
T Consensus 247 ~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~ 326 (435)
T 4e54_B 247 RMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSAS 326 (435)
T ss_dssp BCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESS
T ss_pred ecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECC
Confidence 88999999999999876 7889999999999999876543332 3467899999999986554 5679999999998
Q ss_pred CCceee
Q 048118 240 SKSIVE 245 (303)
Q Consensus 240 ~~~~~~ 245 (303)
+++...
T Consensus 327 ~~~~~~ 332 (435)
T 4e54_B 327 QWDCPL 332 (435)
T ss_dssp SSSSEE
T ss_pred CCccce
Confidence 876543
No 23
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=5.6e-35 Score=251.94 Aligned_cols=264 Identities=22% Similarity=0.374 Sum_probs=200.0
Q ss_pred ccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeee-------------eecCCCcceEEEEeCCCCc---
Q 048118 13 AHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARR-------------RLTGHSHFVQDVVLSSDGQ--- 76 (303)
Q Consensus 13 ~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~-------------~~~~~~~~i~~~~~~~~~~--- 76 (303)
+|...|++++|+|++ ++||+|+ |+++++|++..+......... ....+...|.++.++|+++
T Consensus 62 ~h~~~V~~v~fspdg-~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~ 139 (393)
T 1erj_A 62 DHTSVVCCVKFSNDG-EYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLA 139 (393)
T ss_dssp ECSSCCCEEEECTTS-SEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEE
T ss_pred CCCCEEEEEEECCCC-CEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEE
Confidence 699999999999975 5888876 789999998654321100000 0001223588888988764
Q ss_pred ---------------------eecccCCEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcC
Q 048118 77 ---------------------FVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSP 135 (303)
Q Consensus 77 ---------------------~~~h~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~ 135 (303)
+.+|...|.+++|+|++.+|++++.|+.|++||+......... .+...+.+++|+|
T Consensus 140 s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~---~~~~~v~~~~~~~ 216 (393)
T 1erj_A 140 TGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTL---SIEDGVTTVAVSP 216 (393)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE---ECSSCEEEEEECS
T ss_pred EEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEE---EcCCCcEEEEEEC
Confidence 2479999999999999999999999999999998654322221 1345689999999
Q ss_pred CCCCCEEEEEeCCCcEEEEECCCceeEEEE-------cCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCc------
Q 048118 136 NTLQPTIVSASWDRTVKVWNLSNCKLRATL-------AGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK------ 202 (303)
Q Consensus 136 ~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~-------~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~------ 202 (303)
.. ...+++++.|+.|++||+++++....+ .+|...|++++|+|++++|++++.|++|++||+++..
T Consensus 217 ~~-~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~ 295 (393)
T 1erj_A 217 GD-GKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSK 295 (393)
T ss_dssp TT-CCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC----------
T ss_pred CC-CCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCccccc
Confidence 43 258999999999999999988776665 5788999999999999999999999999999997643
Q ss_pred ------eEEEe-cCCCeEEEEEEcCCCeEEE-EEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeE
Q 048118 203 ------RLYSL-DAGAVIHALCFSPNRYWLC-AATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYC 274 (303)
Q Consensus 203 ------~~~~~-~~~~~v~~~~~s~~~~~l~-~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (303)
....+ .+...|.+++|+|++.+++ ++.|+.|++||+++++.+..+ .+|...+
T Consensus 296 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l--------------------~~h~~~v 355 (393)
T 1erj_A 296 TPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLML--------------------QGHRNSV 355 (393)
T ss_dssp -----CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEE--------------------ECCSSCE
T ss_pred CCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEE--------------------CCCCCCE
Confidence 22222 3456799999999986554 567899999999988765433 2344456
Q ss_pred EEEEEcC------CCCEEEEeecCCeEEEEeccc
Q 048118 275 TSLNWSV------DGSTLFSGYTDGVIRVWGIGR 302 (303)
Q Consensus 275 ~~~~~sp------~~~~l~~gs~Dg~v~~w~~~~ 302 (303)
.+++|+| ++.+|++|+.||+|++|++.+
T Consensus 356 ~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 356 ISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp EEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred EEEEecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 7788765 688999999999999999864
No 24
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.1e-35 Score=254.28 Aligned_cols=291 Identities=16% Similarity=0.197 Sum_probs=221.2
Q ss_pred eeecccccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccc-cceeeeeecCCCcceEEEEeCCC----C---c
Q 048118 5 LVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKT-YGVARRRLTGHSHFVQDVVLSSD----G---Q 76 (303)
Q Consensus 5 ~~~~~~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~----~---~ 76 (303)
+.+...+++|.+.|++++|+| ++|++|+.|++|++|++...+.. .......+.+|...|.++.++++ + .
T Consensus 6 ~~~~~~~~~h~~~i~~~~~~~---~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~ 82 (397)
T 1sq9_A 6 IATANAGKAHDADIFSVSACN---SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELC 82 (397)
T ss_dssp EEEEEESSCSSSCEEEEEECS---SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEE
T ss_pred hhhhhhhhhhhcCeEEEEecC---CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCcccc
Confidence 455667899999999999987 68999999999999999765411 01124455577778888887776 5 3
Q ss_pred e-----------------------------ecc-----cCCEEEEEEe----eCCCE-EEEEeCCCcEEEEecCC-----
Q 048118 77 F-----------------------------VGH-----TKDVLSVAFS----IDNRQ-IVSASRDRTIKLWNTLG----- 112 (303)
Q Consensus 77 ~-----------------------------~~h-----~~~i~~i~~~----~~~~~-l~t~~~d~~i~vw~~~~----- 112 (303)
+ ..| ...|.+++|+ |++.+ |++++.|+.|++||+..
T Consensus 83 ~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 162 (397)
T 1sq9_A 83 LVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADES 162 (397)
T ss_dssp EEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHH
T ss_pred EEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccc
Confidence 2 245 5899999999 99999 99999999999999755
Q ss_pred -ceeee-----eecC-----CCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEEEcC---C---CCCeeEE
Q 048118 113 -ECKYT-----IQEG-----DAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAG---H---TGYVNTV 175 (303)
Q Consensus 113 -~~~~~-----~~~~-----~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~---~---~~~i~~~ 175 (303)
..... .... ..|...|.+++|+|++ .+++++.|+.|++||+++++....+.. | ...|.++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i 239 (397)
T 1sq9_A 163 NSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG---LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSV 239 (397)
T ss_dssp HHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS---EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEE
T ss_pred ccceeeccCcceeeeeeccccCCCCCceEEEECCCc---eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceE
Confidence 21111 1111 3467789999999975 799999999999999999999888988 8 9999999
Q ss_pred EECCCCCEEEEEeCC---CeEEEEeCCCCceEEEec--------------CCCeEEEEEEcCCCeEEEE-EcCCcEEEEe
Q 048118 176 AVSPDGSLCASGGKD---GVILLWDLAEGKRLYSLD--------------AGAVIHALCFSPNRYWLCA-ATEQSIKIWD 237 (303)
Q Consensus 176 ~~~~~~~~l~~~~~d---~~v~iwd~~~~~~~~~~~--------------~~~~v~~~~~s~~~~~l~~-~~~~~i~iwd 237 (303)
+|+|++++|++++.| +.|++||+++++.+..+. ....+.+++|+|++.++++ +.|+.|++||
T Consensus 240 ~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd 319 (397)
T 1sq9_A 240 KFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWD 319 (397)
T ss_dssp EECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred EECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 999999999999999 999999999998888775 4678999999999866654 5689999999
Q ss_pred CCCCceeeeeeeccccccc-cccCccceeeccccceeEEEEEEcCCC----------CEEEEeecCCeEEEEecc
Q 048118 238 LESKSIVEDLKVDLKTEAE-KSEATTATTTIKKKNIYCTSLNWSVDG----------STLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~sp~~----------~~l~~gs~Dg~v~~w~~~ 301 (303)
+++++.+..+......... .............+...+.+++|+|++ .+|++|+.||.|++|++.
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~ 394 (397)
T 1sq9_A 320 VKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREA 394 (397)
T ss_dssp TTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEE
T ss_pred cCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcC
Confidence 9999887766522110000 000000001112235667899999998 799999999999999985
No 25
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=3.4e-34 Score=240.89 Aligned_cols=263 Identities=17% Similarity=0.286 Sum_probs=212.7
Q ss_pred ccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCc--------------
Q 048118 11 MRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQ-------------- 76 (303)
Q Consensus 11 ~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-------------- 76 (303)
..+|.+.|++++|+|++ +++++++ |+.|++|++................|...+.++.++|+++
T Consensus 47 ~~~h~~~v~~~~~~~~~-~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~ 124 (337)
T 1gxr_A 47 TLNHGEVVCAVTISNPT-RHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIW 124 (337)
T ss_dssp EECCSSCCCEEEECSSS-SEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEE
T ss_pred eccCCCceEEEEEecCC-cEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEE
Confidence 44799999999999875 6888888 9999999997654322222222336778888888888763
Q ss_pred ------------eecccCCEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEE
Q 048118 77 ------------FVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVS 144 (303)
Q Consensus 77 ------------~~~h~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 144 (303)
+.+|...|.+++|+|++.++++++.|+.|++||+...... .....|...+.+++|+|++ ..+++
T Consensus 125 d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~--~~~~~~~~~i~~~~~~~~~--~~l~~ 200 (337)
T 1gxr_A 125 DLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLV--RQFQGHTDGASCIDISNDG--TKLWT 200 (337)
T ss_dssp ECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE--EEECCCSSCEEEEEECTTS--SEEEE
T ss_pred ECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCcee--eeeecccCceEEEEECCCC--CEEEE
Confidence 2367788999999999999999999999999998654332 2224577889999999976 57999
Q ss_pred EeCCCcEEEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEecCCCeEEEEEEcCCCeE
Q 048118 145 ASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYW 224 (303)
Q Consensus 145 ~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~ 224 (303)
++.|+.|++||+++++....+. +...+.+++|+|++++|++++.|+.|++||+++++..........+.+++|+|++.+
T Consensus 201 ~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 279 (337)
T 1gxr_A 201 GGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKW 279 (337)
T ss_dssp EETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSE
T ss_pred EecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCCccceeEEEECCCCCE
Confidence 9999999999999988777664 677899999999999999999999999999998876655556788999999999865
Q ss_pred EE-EEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEecc
Q 048118 225 LC-AATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 225 l~-~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~ 301 (303)
++ ++.++.|++||+++++.+.... +...+.+++|+|++++|++|+.||.|++|++-
T Consensus 280 l~~~~~dg~i~~~~~~~~~~~~~~~---------------------~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 280 FVSTGKDNLLNAWRTPYGASIFQSK---------------------ESSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEE---------------------CSSCEEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred EEEecCCCcEEEEECCCCeEEEEec---------------------CCCcEEEEEECCCCCEEEEecCCCeEEEEEEe
Confidence 55 5568999999999877653211 22346789999999999999999999999973
No 26
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.5e-35 Score=249.41 Aligned_cols=254 Identities=21% Similarity=0.200 Sum_probs=191.9
Q ss_pred ccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEe
Q 048118 11 MRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFS 90 (303)
Q Consensus 11 ~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~ 90 (303)
...|...|.+++|+|++ .+|++++ |+++++|+..... .......+.... ......|...|.+++|+
T Consensus 26 ~~~~~~~v~~~~fs~dG-~~l~~~s-d~~~r~Wd~~~~~-----~~~~~~~~~~~~-------~~~~~~~~~~v~~~~~s 91 (344)
T 4gqb_B 26 PACMERQLEAARYRSDG-ALLLGAS-SLSGRCWAGSLWL-----FKDPCAAPNEGF-------CSAGVQTEAGVADLTWV 91 (344)
T ss_dssp CSSCCSEEEEEEECTTS-CEEEEEE-CCSSSCCCEEEEE-----ESSGGGTTCGGG-------CSEEEEESSCEEEEEEE
T ss_pred cccccCCEEEEEECCCC-CEEEEEe-CCceEEeeceeee-----eccccccCCcce-------eeeeeccCCCEEEEEEe
Confidence 34567789999999986 5777776 7889999743100 000000000000 00123467789999999
Q ss_pred eCCCEEEEEeCCCcEEEEecCCceee-ee-ecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEEEcCC
Q 048118 91 IDNRQIVSASRDRTIKLWNTLGECKY-TI-QEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGH 168 (303)
Q Consensus 91 ~~~~~l~t~~~d~~i~vw~~~~~~~~-~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~ 168 (303)
|++ .+++++.|+.|+|||+...... .. .....|...|.+++|+|++ ..+++|+.|+.|++||+.++++...+.+|
T Consensus 92 ~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg--~~l~sgs~d~~i~iwd~~~~~~~~~~~~h 168 (344)
T 4gqb_B 92 GER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSG--TQAVSGSKDICIKVWDLAQQVVLSSYRAH 168 (344)
T ss_dssp TTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTS--SEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred CCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCC--CEEEEEeCCCeEEEEECCCCcEEEEEcCc
Confidence 985 6889999999999998643221 11 1223688899999999986 57999999999999999999999999999
Q ss_pred CCCeeEEEECCCCC-EEEEEeCCCeEEEEeCCCCceEEEec---CCCeEEEEEEcCC-CeEEE-EEcCCcEEEEeCCCCc
Q 048118 169 TGYVNTVAVSPDGS-LCASGGKDGVILLWDLAEGKRLYSLD---AGAVIHALCFSPN-RYWLC-AATEQSIKIWDLESKS 242 (303)
Q Consensus 169 ~~~i~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~---~~~~v~~~~~s~~-~~~l~-~~~~~~i~iwd~~~~~ 242 (303)
.+.|++++|+|++. +|++++.|++|++||+++++.+..+. ....+.+++|+|+ +.+++ ++.|+.|++||+++++
T Consensus 169 ~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~ 248 (344)
T 4gqb_B 169 AAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTS 248 (344)
T ss_dssp SSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--
T ss_pred CCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCc
Confidence 99999999999875 78999999999999999998877764 2456899999996 45555 5678999999999887
Q ss_pred eeeeeeeccccccccccCccceeeccccceeEEEEEEcCCC-CEEEEeecCCeEEEEecc
Q 048118 243 IVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDG-STLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~-~~l~~gs~Dg~v~~w~~~ 301 (303)
.+..+ ..|...+++++|+|++ ++|++|+.||+|++||+.
T Consensus 249 ~~~~~--------------------~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~ 288 (344)
T 4gqb_B 249 CVLSS--------------------AVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSS 288 (344)
T ss_dssp CCEEE--------------------ECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTT
T ss_pred EEEEE--------------------cCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECC
Confidence 65443 3345567889999998 589999999999999975
No 27
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-34 Score=245.38 Aligned_cols=265 Identities=15% Similarity=0.225 Sum_probs=217.5
Q ss_pred ccccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCce-----------
Q 048118 9 GTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQF----------- 77 (303)
Q Consensus 9 ~~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----------- 77 (303)
..+.+|.+.|++++|+|++ ++|++|+.|+.|++|++.... ....+.+|...|.++.+++++.+
T Consensus 26 ~~l~~h~~~v~~~~~s~~~-~~l~~~~~dg~i~vwd~~~~~-----~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~ 99 (369)
T 3zwl_B 26 IKLTGHERPLTQVKYNKEG-DLLFSCSKDSSASVWYSLNGE-----RLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIK 99 (369)
T ss_dssp EEEECCSSCEEEEEECTTS-CEEEEEESSSCEEEEETTTCC-----EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEE
T ss_pred EEEEEeeceEEEEEEcCCC-CEEEEEeCCCEEEEEeCCCch-----hhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEE
Confidence 3588999999999999864 699999999999999986532 34566788889999999887642
Q ss_pred ------------ecccCCEEEEEEeeCCCEEEEEeCC-----CcEEEEecCCcee---e------eeecCCCCcc--ceE
Q 048118 78 ------------VGHTKDVLSVAFSIDNRQIVSASRD-----RTIKLWNTLGECK---Y------TIQEGDAHTE--WVS 129 (303)
Q Consensus 78 ------------~~h~~~i~~i~~~~~~~~l~t~~~d-----~~i~vw~~~~~~~---~------~~~~~~~~~~--~i~ 129 (303)
..|...|.+++|+|++.++++++.+ +.|++|++..... . .......+.. .+.
T Consensus 100 iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (369)
T 3zwl_B 100 LWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAAT 179 (369)
T ss_dssp EEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEE
T ss_pred EEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCcccee
Confidence 1467789999999999999999998 9999998642210 0 0001112222 799
Q ss_pred EEEEcCCCCCCEEEEEeCCCcEEEEECCC-ceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEec
Q 048118 130 CVRFSPNTLQPTIVSASWDRTVKVWNLSN-CKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLD 208 (303)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~ 208 (303)
+++|+|++ ..+++++.||.|++||+.+ .+....+..|...|.+++|+|++++|++++.|+.|++||+++++.+..+.
T Consensus 180 ~~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 257 (369)
T 3zwl_B 180 VAGWSTKG--KYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE 257 (369)
T ss_dssp EEEECGGG--CEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EEEEcCCC--CEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec
Confidence 99999976 4789999999999999988 78888899999999999999999999999999999999999999988888
Q ss_pred CCCeEEEEEEcCCCeEEEEE-cCC--------------cEEEEeCCCCceeeeeeeccccccccccCccceeecccccee
Q 048118 209 AGAVIHALCFSPNRYWLCAA-TEQ--------------SIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIY 273 (303)
Q Consensus 209 ~~~~v~~~~~s~~~~~l~~~-~~~--------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (303)
....+..++|+|++.+++++ .++ .+++||+++++.+..+ ..+...
T Consensus 258 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~--------------------~~~~~~ 317 (369)
T 3zwl_B 258 TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRV--------------------QGHFGP 317 (369)
T ss_dssp CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEE--------------------ECCSSC
T ss_pred CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhhe--------------------ecccCc
Confidence 88899999999998776654 455 6899998887665443 234456
Q ss_pred EEEEEEcCCCCEEEEeecCCeEEEEecc
Q 048118 274 CTSLNWSVDGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 274 ~~~~~~sp~~~~l~~gs~Dg~v~~w~~~ 301 (303)
+.+++|+|++++|++|+.||.|++|++.
T Consensus 318 v~~~~~s~~~~~l~s~~~dg~v~iw~~~ 345 (369)
T 3zwl_B 318 LNTVAISPQGTSYASGGEDGFIRLHHFE 345 (369)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEEEC
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECc
Confidence 7889999999999999999999999985
No 28
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=9.4e-35 Score=247.83 Aligned_cols=285 Identities=15% Similarity=0.177 Sum_probs=219.9
Q ss_pred ccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCce-------------
Q 048118 11 MRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQF------------- 77 (303)
Q Consensus 11 ~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~------------- 77 (303)
+..|.+.|++++|+|++ ++|++++.|+.|++|++...+ ......+.+|...|.++.+++++.+
T Consensus 4 ~~~~~~~i~~~~~s~~~-~~l~~~~~d~~v~i~~~~~~~---~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vw 79 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDR-TQIAICPNNHEVHIYEKSGNK---WVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVW 79 (372)
T ss_dssp EESCSSCCCEEEECTTS-SEEEEECSSSEEEEEEEETTE---EEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred ecccCCCeEEEEECCCC-CEEEEEeCCCEEEEEeCCCCc---EEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEE
Confidence 34588999999999875 689999999999999987542 1134566788889999998887632
Q ss_pred -------------ecccCCEEEEEEeeCCCEEEEEeCCCcEEEEecCCcee--eeeecCCCCccceEEEEEcCCCCCCEE
Q 048118 78 -------------VGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECK--YTIQEGDAHTEWVSCVRFSPNTLQPTI 142 (303)
Q Consensus 78 -------------~~h~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~ 142 (303)
..|...|.+++|+|++.++++++.|+.|++|+...... ........|...|.+++|+|++ ..+
T Consensus 80 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~l 157 (372)
T 1k8k_C 80 TLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNS--VLL 157 (372)
T ss_dssp EEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTS--SEE
T ss_pred ECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCC--CEE
Confidence 35788999999999999999999999999999754321 1122234577889999999975 579
Q ss_pred EEEeCCCcEEEEECC------------------CceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceE
Q 048118 143 VSASWDRTVKVWNLS------------------NCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRL 204 (303)
Q Consensus 143 ~~~~~dg~i~iwd~~------------------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~ 204 (303)
++++.|+.|++||++ .++....+..|...|.+++|+|++++|++++.|+.|++||+++++.+
T Consensus 158 ~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 237 (372)
T 1k8k_C 158 AAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAV 237 (372)
T ss_dssp EEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEE
T ss_pred EEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCcee
Confidence 999999999999953 56778888899999999999999999999999999999999999988
Q ss_pred EEecC-CCeEEEEEEcCCCeEEEEEcCCcEEEEeCCC--Cce--eeeeeeccccc---------c---c-cccC---ccc
Q 048118 205 YSLDA-GAVIHALCFSPNRYWLCAATEQSIKIWDLES--KSI--VEDLKVDLKTE---------A---E-KSEA---TTA 263 (303)
Q Consensus 205 ~~~~~-~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~--~~~--~~~~~~~~~~~---------~---~-~~~~---~~~ 263 (303)
..+.. ...+.+++|+|++.+++++.++.|++|+++. ++. +..+....... . . .... ...
T Consensus 238 ~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (372)
T 1k8k_C 238 ATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAA 317 (372)
T ss_dssp EEEECSSCCEEEEEEEETTEEEEEETTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC--------
T ss_pred EEEccCCCCeEEEEEecCCCEEEEEeCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccc
Confidence 87754 4589999999999999999999999999987 532 11111100000 0 0 0000 000
Q ss_pred eeec-cccceeEEEEEEc-CCC---CEEEEeecCCeEEEEecc
Q 048118 264 TTTI-KKKNIYCTSLNWS-VDG---STLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 264 ~~~~-~~~~~~~~~~~~s-p~~---~~l~~gs~Dg~v~~w~~~ 301 (303)
...+ .+|...+++++|+ +++ .+|++|+.||.|++|++.
T Consensus 318 ~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~ 360 (372)
T 1k8k_C 318 GAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVR 360 (372)
T ss_dssp -CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHH
T ss_pred cccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEec
Confidence 0122 3667788999866 666 899999999999999984
No 29
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-35 Score=251.29 Aligned_cols=258 Identities=19% Similarity=0.318 Sum_probs=200.6
Q ss_pred ecccccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEE
Q 048118 7 LKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLS 86 (303)
Q Consensus 7 ~~~~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~ 86 (303)
++..+++|.+.|++++|+|++ ++|++|+.|+.|++|++...... .. ..+.+|.+.|.+
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~-~~l~~~~~dg~i~iw~~~~~~~~---~~------------------~~~~~h~~~v~~ 60 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYYG-KRLATCSSDKTIKIFEVEGETHK---LI------------------DTLTGHEGPVWR 60 (379)
T ss_dssp --CCEEECCCCEEEEEECSSS-SEEEEEETTSCEEEEEEETTEEE---EE------------------EEECCCSSCEEE
T ss_pred ccEEecCCcccEEEEEEcCCC-CEEEEEECCCcEEEEecCCCcce---ee------------------eEecCCCCcEEE
Confidence 345789999999999999875 68999999999999998632111 11 134578999999
Q ss_pred EEEeeC--CCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCc--eeE
Q 048118 87 VAFSID--NRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNC--KLR 162 (303)
Q Consensus 87 i~~~~~--~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~--~~~ 162 (303)
++|+++ +.+|++++.|+.|++||+.............|...|.+++|+|+.....+++++.|+.|++||+.+. ...
T Consensus 61 ~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~ 140 (379)
T 3jrp_A 61 VDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSP 140 (379)
T ss_dssp EEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCE
T ss_pred EEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceee
Confidence 999977 8999999999999999986553223333456788899999999832258999999999999999876 344
Q ss_pred EEEcCCCCCeeEEEECC-------------CCCEEEEEeCCCeEEEEeCCCCceE----EEec-CCCeEEEEEEcCC---
Q 048118 163 ATLAGHTGYVNTVAVSP-------------DGSLCASGGKDGVILLWDLAEGKRL----YSLD-AGAVIHALCFSPN--- 221 (303)
Q Consensus 163 ~~~~~~~~~i~~~~~~~-------------~~~~l~~~~~d~~v~iwd~~~~~~~----~~~~-~~~~v~~~~~s~~--- 221 (303)
..+..|...|.+++|+| ++.+|++++.|+.|++||++++... ..+. +...|.+++|+|+
T Consensus 141 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~ 220 (379)
T 3jrp_A 141 IIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLL 220 (379)
T ss_dssp EEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSS
T ss_pred EEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCC
Confidence 56778999999999999 6899999999999999999876532 3333 4678999999999
Q ss_pred CeEEE-EEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEec
Q 048118 222 RYWLC-AATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 300 (303)
Q Consensus 222 ~~~l~-~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~ 300 (303)
+.+++ ++.|+.|++||++++........ .....+...+.+++|+|++.+|++++.||.|++|++
T Consensus 221 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---------------~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~ 285 (379)
T 3jrp_A 221 RSYLASVSQDRTCIIWTQDNEQGPWKKTL---------------LKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE 285 (379)
T ss_dssp SEEEEEEETTSCEEEEEESSTTSCCEEEE---------------SSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEE
T ss_pred CCeEEEEeCCCEEEEEeCCCCCccceeee---------------eccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeC
Confidence 76665 45699999999987642111110 011223445788999999999999999999999998
Q ss_pred c
Q 048118 301 G 301 (303)
Q Consensus 301 ~ 301 (303)
.
T Consensus 286 ~ 286 (379)
T 3jrp_A 286 N 286 (379)
T ss_dssp E
T ss_pred C
Confidence 5
No 30
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=5.7e-35 Score=243.32 Aligned_cols=248 Identities=26% Similarity=0.377 Sum_probs=197.1
Q ss_pred ecccccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEE
Q 048118 7 LKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLS 86 (303)
Q Consensus 7 ~~~~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~ 86 (303)
.+..+.+|...|.++.|+|++ ++|++|+.|++|++||+...+.. . .+.+|.+.|.+
T Consensus 47 ~~~~~~~~~~~v~~~~~~~~~-~~l~s~s~d~~i~vwd~~~~~~~-----~------------------~~~~h~~~v~~ 102 (304)
T 2ynn_A 47 EVRSIQVTETPVRAGKFIARK-NWIIVGSDDFRIRVFNYNTGEKV-----V------------------DFEAHPDYIRS 102 (304)
T ss_dssp EEEEEECCSSCEEEEEEEGGG-TEEEEEETTSEEEEEETTTCCEE-----E------------------EEECCSSCEEE
T ss_pred eeEEeeccCCcEEEEEEeCCC-CEEEEECCCCEEEEEECCCCcEE-----E------------------EEeCCCCcEEE
Confidence 345678899999999999874 68999999999999998754321 1 35679999999
Q ss_pred EEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEEE-
Q 048118 87 VAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATL- 165 (303)
Q Consensus 87 i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~- 165 (303)
++|+|++.+|++|+.|+.|++||+...... ......|...|.+++|+|.. ...+++|+.|+.|++||+........+
T Consensus 103 ~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~-~~~~~~h~~~v~~v~~~p~~-~~~l~sgs~D~~v~iwd~~~~~~~~~~~ 180 (304)
T 2ynn_A 103 IAVHPTKPYVLSGSDDLTVKLWNWENNWAL-EQTFEGHEHFVMCVAFNPKD-PSTFASGCLDRTVKVWSLGQSTPNFTLT 180 (304)
T ss_dssp EEECSSSSEEEEEETTSCEEEEEGGGTTEE-EEEECCCCSCEEEEEECTTC-TTEEEEEETTSEEEEEETTCSSCSEEEE
T ss_pred EEEcCCCCEEEEECCCCeEEEEECCCCcch-hhhhcccCCcEEEEEECCCC-CCEEEEEeCCCeEEEEECCCCCccceec
Confidence 999999999999999999999998543211 22235688899999999954 257999999999999999876655444
Q ss_pred cCCCCCeeEEEECC--CCCEEEEEeCCCeEEEEeCCCCceEEEec-CCCeEEEEEEcCCCeEEE-EEcCCcEEEEeCCCC
Q 048118 166 AGHTGYVNTVAVSP--DGSLCASGGKDGVILLWDLAEGKRLYSLD-AGAVIHALCFSPNRYWLC-AATEQSIKIWDLESK 241 (303)
Q Consensus 166 ~~~~~~i~~~~~~~--~~~~l~~~~~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~-~~~~~~i~iwd~~~~ 241 (303)
.+|...+..+.++| ++++|++++.|++|++||+++++.+.++. +...|.+++|+|++.+++ ++.|+.|++||++++
T Consensus 181 ~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~ 260 (304)
T 2ynn_A 181 TGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTY 260 (304)
T ss_dssp CCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC
T ss_pred cCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 45667899999987 67899999999999999999999888875 457899999999986555 557999999999998
Q ss_pred ceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCC--EEEEeecCCeEEEEecc
Q 048118 242 SIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGS--TLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~--~l~~gs~Dg~v~~w~~~ 301 (303)
+.+..+.. +...+++++|+|++. ++++|+.|| +.+|+++
T Consensus 261 ~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~asg~~~g-~~~~~~~ 301 (304)
T 2ynn_A 261 KVEKTLNV--------------------GLERSWCIATHPTGRKNYIASGFDNG-FTVLSLG 301 (304)
T ss_dssp CEEEEECC--------------------SSSSEEEEEECTTCGGGCEEEEETTE-EEEEECC
T ss_pred ceeeeccC--------------------CCccEEEEEECCCCCceEEEEecCCc-eEEEEec
Confidence 87665432 223457799999875 577777555 5577764
No 31
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=4.2e-34 Score=257.82 Aligned_cols=260 Identities=36% Similarity=0.572 Sum_probs=213.9
Q ss_pred ecccccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCc----------
Q 048118 7 LKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQ---------- 76 (303)
Q Consensus 7 ~~~~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---------- 76 (303)
.+..+.+|...|++++|+|++ .++++++.|++|++|+... .....+.+|...|..+.++|+++
T Consensus 254 ~~~~~~~~~~~v~~v~~~~d~-~~l~~~~~d~~i~~w~~~~------~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~ 326 (577)
T 2ymu_A 254 LLQTLTGHSSSVNGVAFRPDG-QTIASASDDKTVKLWNRNG------QLLQTLTGHSSSVWGVAFSPDGQTIASASDDKT 326 (577)
T ss_dssp EEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTS------CEEEEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEEEEecCCCCEEEEEEcCCC-CEEEEEeCCCEEEEEeCCC------cEEEEEecCCCCeEEEEECCCCCEEEEEeCCCe
Confidence 344678899999999999875 6899999999999999642 23455678888899998888763
Q ss_pred -------------eecccCCEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEE
Q 048118 77 -------------FVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIV 143 (303)
Q Consensus 77 -------------~~~h~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 143 (303)
+.+|...|.+++|+|+++++++++.|+.|++|+..+.....+ ..|...|.+++|+|++ ..++
T Consensus 327 i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~---~~~~~~v~~~~~s~dg--~~l~ 401 (577)
T 2ymu_A 327 VKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTL---TGHSSSVRGVAFSPDG--QTIA 401 (577)
T ss_dssp EEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTCCEEEEE---ECCSSCEEEEEECTTS--SCEE
T ss_pred EEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEe---cCCCCCeEEEEECCCC--CEEE
Confidence 236888999999999999999999999999999765443333 3577889999999986 4689
Q ss_pred EEeCCCcEEEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEe-cCCCeEEEEEEcCCC
Q 048118 144 SASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL-DAGAVIHALCFSPNR 222 (303)
Q Consensus 144 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~-~~~~~v~~~~~s~~~ 222 (303)
+++.|+.|++||. +++....+.+|...|++++|+|++++|++++.|++|++||+. ++.+..+ .....+.+++|+|++
T Consensus 402 ~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~-~~~~~~~~~~~~~v~~~~~spd~ 479 (577)
T 2ymu_A 402 SASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVRGVAFSPDG 479 (577)
T ss_dssp EEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-SCEEEEEECCSSCEEEEEECTTS
T ss_pred EEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECC-CCEEEEEcCCCCCEEEEEEcCCC
Confidence 9999999999996 566778889999999999999999999999999999999974 4555554 456789999999998
Q ss_pred eEEEE-EcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEecc
Q 048118 223 YWLCA-ATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 223 ~~l~~-~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~ 301 (303)
.++++ +.|+.|++||. +++.+..+ .+|...+++++|+|++++|++|+.||.|++||..
T Consensus 480 ~~las~~~d~~i~iw~~-~~~~~~~~--------------------~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~ 538 (577)
T 2ymu_A 480 QTIASASDDKTVKLWNR-NGQLLQTL--------------------TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN 538 (577)
T ss_dssp CEEEEEETTSEEEEEET-TSCEEEEE--------------------ECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT
T ss_pred CEEEEEeCCCEEEEEcC-CCCEEEEE--------------------eCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCC
Confidence 77665 56899999996 45444332 2344567889999999999999999999999963
No 32
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-34 Score=239.01 Aligned_cols=260 Identities=25% Similarity=0.473 Sum_probs=210.5
Q ss_pred ceeecccccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCc-------
Q 048118 4 GLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQ------- 76 (303)
Q Consensus 4 ~~~~~~~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------- 76 (303)
+..+..++++|.+.|++++| |++ ++|++|+.|+.|++|++.... ....+..|...+.++.++|++.
T Consensus 7 ~~~~~~~l~~h~~~v~~~~~-~~~-~~l~s~~~dg~v~vw~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 79 (313)
T 3odt_A 7 GYQLSATLKGHDQDVRDVVA-VDD-SKVASVSRDGTVRLWSKDDQW-----LGTVVYTGQGFLNSVCYDSEKELLLFGGK 79 (313)
T ss_dssp CCEEEEEECCCSSCEEEEEE-EET-TEEEEEETTSEEEEEEESSSE-----EEEEEEECSSCEEEEEEETTTTEEEEEET
T ss_pred cHHHHHHhhCCCCCcEEEEe-cCC-CEEEEEEcCCcEEEEECCCCE-----EEEEeecCCccEEEEEECCCCCEEEEecC
Confidence 45677789999999999999 654 689999999999999985432 2344556677888888877653
Q ss_pred --------------------eecccCCEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCC
Q 048118 77 --------------------FVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPN 136 (303)
Q Consensus 77 --------------------~~~h~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 136 (303)
+.+|...|.+++| ++.++++++.|+.|++||. ....... ..|...+.+++|+|.
T Consensus 80 dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d~-~~~~~~~---~~~~~~v~~~~~~~~ 153 (313)
T 3odt_A 80 DTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWKE-GSLVYNL---QAHNASVWDAKVVSF 153 (313)
T ss_dssp TSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEET-TEEEEEE---ECCSSCEEEEEEEET
T ss_pred CCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEcC-CcEEEec---ccCCCceeEEEEccC
Confidence 2368889999999 5779999999999999993 2222222 356778999999883
Q ss_pred CCCCEEEEEeCCCcEEEEECCCceeEEEEcC-CCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEec-CCCeEE
Q 048118 137 TLQPTIVSASWDRTVKVWNLSNCKLRATLAG-HTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLD-AGAVIH 214 (303)
Q Consensus 137 ~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~-~~~~v~ 214 (303)
. ...+++++.|+.|++|| ..+....+.. |...+.+++|+|++. +++++.|+.|++||+++++.+..+. ....+.
T Consensus 154 ~-~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~ 229 (313)
T 3odt_A 154 S-ENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVY 229 (313)
T ss_dssp T-TTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred C-CCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEE
Confidence 2 35899999999999999 4455666666 889999999999988 8999999999999999999888875 567899
Q ss_pred EEEEcCCCeEEEEEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCe
Q 048118 215 ALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGV 294 (303)
Q Consensus 215 ~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~ 294 (303)
+++|+|++.+++++.|+.|++||+++++.+..+.. +...+.+++|+|+++ +++++.||.
T Consensus 230 ~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~--------------------~~~~i~~~~~~~~~~-~~~~~~dg~ 288 (313)
T 3odt_A 230 CIKLLPNGDIVSCGEDRTVRIWSKENGSLKQVITL--------------------PAISIWSVDCMSNGD-IIVGSSDNL 288 (313)
T ss_dssp EEEECTTSCEEEEETTSEEEEECTTTCCEEEEEEC--------------------SSSCEEEEEECTTSC-EEEEETTSC
T ss_pred EEEEecCCCEEEEecCCEEEEEECCCCceeEEEec--------------------cCceEEEEEEccCCC-EEEEeCCCc
Confidence 99999999888888999999999998877655432 223467899999998 667999999
Q ss_pred EEEEecc
Q 048118 295 IRVWGIG 301 (303)
Q Consensus 295 v~~w~~~ 301 (303)
|++|++.
T Consensus 289 i~iw~~~ 295 (313)
T 3odt_A 289 VRIFSQE 295 (313)
T ss_dssp EEEEESC
T ss_pred EEEEeCC
Confidence 9999985
No 33
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=7.3e-35 Score=247.72 Aligned_cols=272 Identities=18% Similarity=0.278 Sum_probs=204.2
Q ss_pred ccccccceeeeecCCC---CCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCC----Cc-------
Q 048118 11 MRAHTDMVTAIATPID---NSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSD----GQ------- 76 (303)
Q Consensus 11 ~~~h~~~v~~v~~~~~---~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~------- 76 (303)
.++|.+.|++++|+|. +...+++++.++.|++|++...+............+...+.++.++++ +.
T Consensus 14 ~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~ 93 (366)
T 3k26_A 14 KEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGS 93 (366)
T ss_dssp ECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEET
T ss_pred ecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecC
Confidence 5589999999999984 455677777778999999975543222222222335667777777766 22
Q ss_pred -----------------eecccCCEEEEEEee-CCCEEEEEeCCCcEEEEecCCceeee-eecCCCCccceEEEEEcCCC
Q 048118 77 -----------------FVGHTKDVLSVAFSI-DNRQIVSASRDRTIKLWNTLGECKYT-IQEGDAHTEWVSCVRFSPNT 137 (303)
Q Consensus 77 -----------------~~~h~~~i~~i~~~~-~~~~l~t~~~d~~i~vw~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~ 137 (303)
+.+|...|.+++|+| ++.+|++++.|+.|++||+....... ......|...|.+++|+|++
T Consensus 94 dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 173 (366)
T 3k26_A 94 RGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLG 173 (366)
T ss_dssp TCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTS
T ss_pred CCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCC
Confidence 347999999999999 89999999999999999986543322 22224678899999999975
Q ss_pred CCCEEEEEeCCCcEEEEECCCceeEEE----------------------------EcCCCCCeeEEEECCCCCEEEEEeC
Q 048118 138 LQPTIVSASWDRTVKVWNLSNCKLRAT----------------------------LAGHTGYVNTVAVSPDGSLCASGGK 189 (303)
Q Consensus 138 ~~~~~~~~~~dg~i~iwd~~~~~~~~~----------------------------~~~~~~~i~~~~~~~~~~~l~~~~~ 189 (303)
..+++++.|+.|++||+++++.... ...|...|.+++|+ +++|++++.
T Consensus 174 --~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~ 249 (366)
T 3k26_A 174 --EKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSC 249 (366)
T ss_dssp --SEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECS
T ss_pred --CEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEec
Confidence 5799999999999999987654322 23388999999998 679999999
Q ss_pred CCeEEEEeCCCCce--------------EEEec-CCCeEEEEEEcCC--CeEEEE-EcCCcEEEEeCCCCceeeeeeecc
Q 048118 190 DGVILLWDLAEGKR--------------LYSLD-AGAVIHALCFSPN--RYWLCA-ATEQSIKIWDLESKSIVEDLKVDL 251 (303)
Q Consensus 190 d~~v~iwd~~~~~~--------------~~~~~-~~~~v~~~~~s~~--~~~l~~-~~~~~i~iwd~~~~~~~~~~~~~~ 251 (303)
|+.|++||+++++. +..+. ....+.+++|+|+ +.++++ +.||.|++||+++++......
T Consensus 250 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~--- 326 (366)
T 3k26_A 250 ENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKC--- 326 (366)
T ss_dssp SSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEE---
T ss_pred CCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccc---
Confidence 99999999987643 33332 3456788899998 876665 568999999998875432111
Q ss_pred ccccccccCccceeecccc--ceeEEEEEEcCCCCEEEEeecCCeEEEEeccc
Q 048118 252 KTEAEKSEATTATTTIKKK--NIYCTSLNWSVDGSTLFSGYTDGVIRVWGIGR 302 (303)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~~ 302 (303)
..+..+ ...+.+++|+|++++|++|+.||.|++||+.+
T Consensus 327 -------------~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 327 -------------TTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp -------------EEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred -------------eEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 112222 45678999999999999999999999999864
No 34
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=3.8e-34 Score=241.06 Aligned_cols=273 Identities=18% Similarity=0.272 Sum_probs=199.6
Q ss_pred ccccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEE
Q 048118 9 GTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVA 88 (303)
Q Consensus 9 ~~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~ 88 (303)
..+++|.+.|++++|+|++ ++|++|+.|++|++|++........ .. ..+.+|...|.+++
T Consensus 5 ~~~~gH~~~v~~~~~~~~~-~~l~~~~~dg~i~iw~~~~~~~~~~-~~------------------~~~~~~~~~v~~~~ 64 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYG-RHVATCSSDQHIKVFKLDKDTSNWE-LS------------------DSWRAHDSSIVAID 64 (351)
T ss_dssp CEECCCSSCEEEEEECSSS-SEEEEEETTSEEEEEEECSSSCCEE-EE------------------EEEECCSSCEEEEE
T ss_pred ccCcccccceeEEEEcCCC-CEEEEeeCCCeEEEEECCCCCCcce-ec------------------ceeccCCCcEEEEE
Confidence 4578999999999999864 6899999999999999875432110 00 13457999999999
Q ss_pred Eee--CCCEEEEEeCCCcEEEEecCCcee-------eeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCc
Q 048118 89 FSI--DNRQIVSASRDRTIKLWNTLGECK-------YTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNC 159 (303)
Q Consensus 89 ~~~--~~~~l~t~~~d~~i~vw~~~~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~ 159 (303)
|+| ++.+|++++.|+.|++||+..... ........|...|.+++|+|+.....+++++.|+.|++||++++
T Consensus 65 ~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~ 144 (351)
T 3f3f_A 65 WASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEP 144 (351)
T ss_dssp ECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSST
T ss_pred EcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCCh
Confidence 999 599999999999999999864311 12233346788899999999721257999999999999999776
Q ss_pred eeEEEE-------------cCCCCCeeEEEECCC---CCEEEEEeCCCeEEEEeCCCCce--EEEec-CCCeEEEEEEcC
Q 048118 160 KLRATL-------------AGHTGYVNTVAVSPD---GSLCASGGKDGVILLWDLAEGKR--LYSLD-AGAVIHALCFSP 220 (303)
Q Consensus 160 ~~~~~~-------------~~~~~~i~~~~~~~~---~~~l~~~~~d~~v~iwd~~~~~~--~~~~~-~~~~v~~~~~s~ 220 (303)
+....+ ..|...+.+++|+|+ +..+++++.|+.+.+|+...++. +..+. ....|.+++|+|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p 224 (351)
T 3f3f_A 145 SDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAP 224 (351)
T ss_dssp TCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECC
T ss_pred HHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECC
Confidence 532221 257788999999997 89999999999998888877664 44443 467899999999
Q ss_pred CC----eEE-EEEcCCcEEEEeCCCCceeeeeeeccccc--------------------------cccccCccceeeccc
Q 048118 221 NR----YWL-CAATEQSIKIWDLESKSIVEDLKVDLKTE--------------------------AEKSEATTATTTIKK 269 (303)
Q Consensus 221 ~~----~~l-~~~~~~~i~iwd~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~ 269 (303)
++ .++ +++.|+.|++||++.+............. ............+..
T Consensus 225 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (351)
T 3f3f_A 225 SIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDD 304 (351)
T ss_dssp CSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECT
T ss_pred CCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEec
Confidence 97 544 55679999999987653221110000000 000000112334456
Q ss_pred cceeEEEEEEcCCCCEEEEeecCCeEEEEecc
Q 048118 270 KNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 270 ~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~ 301 (303)
|...+++++|+|++++|++|+.||.|++|++.
T Consensus 305 h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~ 336 (351)
T 3f3f_A 305 HNGEVWSVSWNLTGTILSSAGDDGKVRLWKAT 336 (351)
T ss_dssp TSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred ccccEEEEEEcCCCCEEEEecCCCcEEEEecC
Confidence 67778999999999999999999999999985
No 35
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.4e-34 Score=246.93 Aligned_cols=266 Identities=15% Similarity=0.230 Sum_probs=211.3
Q ss_pred ccccccceeeeecCCCCCcEEEEecCCCcEEEEEc----ccCcc-----ccceeeeeecC------CCcceEEEEeCCCC
Q 048118 11 MRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHL----TKEEK-----TYGVARRRLTG------HSHFVQDVVLSSDG 75 (303)
Q Consensus 11 ~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~----~~~~~-----~~~~~~~~~~~------~~~~i~~~~~~~~~ 75 (303)
.+.|.+.|++++|+|++..+|++|+.|+.|++|++ ..... ........+.. |...|.++.++|++
T Consensus 41 ~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 120 (425)
T 1r5m_A 41 EIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDG 120 (425)
T ss_dssp EEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTS
T ss_pred eeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCC
Confidence 45566899999999986559999999999999999 54431 11111111222 56789999999876
Q ss_pred ce-----------------------ecccCCEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccc-----
Q 048118 76 QF-----------------------VGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEW----- 127 (303)
Q Consensus 76 ~~-----------------------~~h~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~----- 127 (303)
.+ .+|...|.+++|+|++.+|++++.|+.|++|++......... ..+...
T Consensus 121 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~ 198 (425)
T 1r5m_A 121 NSIVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHF--ELKETGGSSIN 198 (425)
T ss_dssp SEEEEEETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEE--CCC--------
T ss_pred CEEEEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEe--eccccCcccee
Confidence 42 368899999999999999999999999999998654332211 222233
Q ss_pred ----------eEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEe
Q 048118 128 ----------VSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWD 197 (303)
Q Consensus 128 ----------i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd 197 (303)
+.++.|+|++ .+++++.++.|++||+.+++....+..|...|.+++|+|++++|++++.|+.|++||
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d 275 (425)
T 1r5m_A 199 AENHSGDGSLGVDVEWVDDD---KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWH 275 (425)
T ss_dssp -------CCCBSCCEEEETT---EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEC
T ss_pred eccccCCcceeeEEEEcCCC---EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEE
Confidence 7788898864 689999999999999999888888999999999999999999999999999999999
Q ss_pred CCCCceEEEec-CCCeEEEEEEcCCCeEEEEEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEE
Q 048118 198 LAEGKRLYSLD-AGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTS 276 (303)
Q Consensus 198 ~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (303)
+++++.+..+. ....+.+++|+|++.+++++.++.|++||+++++.+..+. .+...+.+
T Consensus 276 ~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--------------------~~~~~i~~ 335 (425)
T 1r5m_A 276 GGNGNSQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALSI--------------------VDGVPIFA 335 (425)
T ss_dssp SSSBSCSEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEEEE--------------------CTTCCEEE
T ss_pred CCCCccceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEecc--------------------cCCccEEE
Confidence 99888777775 5678999999999966677789999999999887665433 22335678
Q ss_pred EEEcCCCCEEEEeecCCeEEEEecc
Q 048118 277 LNWSVDGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 277 ~~~sp~~~~l~~gs~Dg~v~~w~~~ 301 (303)
++|+|++.+|++|+.||.|++||+.
T Consensus 336 ~~~s~~~~~l~~~~~dg~i~i~~~~ 360 (425)
T 1r5m_A 336 GRISQDGQKYAVAFMDGQVNVYDLK 360 (425)
T ss_dssp EEECTTSSEEEEEETTSCEEEEECH
T ss_pred EEEcCCCCEEEEEECCCeEEEEECC
Confidence 9999999999999999999999984
No 36
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.8e-35 Score=254.52 Aligned_cols=290 Identities=13% Similarity=0.198 Sum_probs=205.3
Q ss_pred ecccc-cccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCcccc-ceeeeeecCCCcceEEEEeCCCCcee------
Q 048118 7 LKGTM-RAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTY-GVARRRLTGHSHFVQDVVLSSDGQFV------ 78 (303)
Q Consensus 7 ~~~~~-~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~------ 78 (303)
++.++ ++|.+.|++++|+|.++.+|+||+.|++|++|++...+... ......+ .|...|.++.+++++.+.
T Consensus 54 ~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~d 132 (437)
T 3gre_A 54 LIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKD 132 (437)
T ss_dssp EEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEETT
T ss_pred EEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeCC
Confidence 44556 88999999999998335799999999999999987522111 0011122 477888889888865421
Q ss_pred -------------------------------c--ccCCEEEEE--EeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCC
Q 048118 79 -------------------------------G--HTKDVLSVA--FSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDA 123 (303)
Q Consensus 79 -------------------------------~--h~~~i~~i~--~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~ 123 (303)
. +...+.++. +++++.++++++.|+.|++||+.............
T Consensus 133 g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 212 (437)
T 3gre_A 133 GQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSP 212 (437)
T ss_dssp SEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCG
T ss_pred CEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCC
Confidence 0 333444444 44678899999999999999986543322222223
Q ss_pred CccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEEEc-CCCCCeeEEEECC----CCCEEEEEeCCCeEEEEeC
Q 048118 124 HTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLA-GHTGYVNTVAVSP----DGSLCASGGKDGVILLWDL 198 (303)
Q Consensus 124 ~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~i~~~~~~~----~~~~l~~~~~d~~v~iwd~ 198 (303)
|...|.+++|+|++ ..+++|+.||.|++||++++++...+. .|...|++++++| ++++|++++.||+|++||+
T Consensus 213 h~~~v~~~~~s~~~--~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~ 290 (437)
T 3gre_A 213 RHGAVSSICIDEEC--CVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNF 290 (437)
T ss_dssp GGCCEEEEEECTTS--CEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEET
T ss_pred CCCceEEEEECCCC--CEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEc
Confidence 77889999999985 589999999999999999999888876 6778999996654 5779999999999999999
Q ss_pred CCCceEEEec---------------------------CCCeEEEEEEcCCCeEEEEEcCCcEEEEeCCCCceeeeeeecc
Q 048118 199 AEGKRLYSLD---------------------------AGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDL 251 (303)
Q Consensus 199 ~~~~~~~~~~---------------------------~~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~ 251 (303)
++++.+..+. ....|.+++|+++..+++++.|+.|++||+++++....+....
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~ 370 (437)
T 3gre_A 291 VKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDEATSSIVMFSLNELSSSKAVISPS 370 (437)
T ss_dssp TTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEEEGGGTEEEEEETTCGGGCEEEECC-
T ss_pred CCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEECCceEEEecCCCCeEEEEECCCcccceEEeccc
Confidence 9988776653 2234788899944345556679999999999887765554211
Q ss_pred cccc---------------cc--ccCccceeeccccceeEEEEEEcCC--CCEEEEeecCCeEEEEe
Q 048118 252 KTEA---------------EK--SEATTATTTIKKKNIYCTSLNWSVD--GSTLFSGYTDGVIRVWG 299 (303)
Q Consensus 252 ~~~~---------------~~--~~~~~~~~~~~~~~~~~~~~~~sp~--~~~l~~gs~Dg~v~~w~ 299 (303)
.... .. ............|...+++++|+++ +.+|++|+.||.|++|+
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 371 RFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp -CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred ccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 0000 00 0000001112236677889999988 77999999999999995
No 37
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=4.4e-34 Score=242.22 Aligned_cols=289 Identities=12% Similarity=0.154 Sum_probs=208.5
Q ss_pred eecccccccccceeeeecCCCCCcEEEEecC---CCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCC---Cc---
Q 048118 6 VLKGTMRAHTDMVTAIATPIDNSDMIVTASR---DKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSD---GQ--- 76 (303)
Q Consensus 6 ~~~~~~~~h~~~v~~v~~~~~~~~~~~t~s~---d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~--- 76 (303)
.+...+++|.+.|++++|+|++..++++|+. |+.|++|++...... .....+|...|.++.++++ +.
T Consensus 9 ~~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~~l~ 84 (357)
T 3i2n_A 9 IIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLK----LLREIEKAKPIKCGTFGATSLQQRYLA 84 (357)
T ss_dssp EEEEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEE----EEEEEEESSCEEEEECTTCCTTTCCEE
T ss_pred HhhhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCccc----ceeeecccCcEEEEEEcCCCCCCceEE
Confidence 4445578899999999999987777778877 999999999754321 1112246677888888876 22
Q ss_pred ----------------------eecccCCEEEEEE------eeCCCEEEEEeCCCcEEEEecCCce--eeeeecCCC-Cc
Q 048118 77 ----------------------FVGHTKDVLSVAF------SIDNRQIVSASRDRTIKLWNTLGEC--KYTIQEGDA-HT 125 (303)
Q Consensus 77 ----------------------~~~h~~~i~~i~~------~~~~~~l~t~~~d~~i~vw~~~~~~--~~~~~~~~~-~~ 125 (303)
+.+|.+.|.+++| +|++.+|++++.|+.|++||+.... ...+..... ..
T Consensus 85 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~ 164 (357)
T 3i2n_A 85 TGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENK 164 (357)
T ss_dssp EEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCC
T ss_pred EecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCC
Confidence 3478899999955 6789999999999999999986532 222221111 23
Q ss_pred cceEEEE----EcCCCCCCEEEEEeCCCcEEEEECCCceeEEEEcCCCCCeeEEEECC---CCCEEEEEeCCCeEEEEeC
Q 048118 126 EWVSCVR----FSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSP---DGSLCASGGKDGVILLWDL 198 (303)
Q Consensus 126 ~~i~~~~----~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~---~~~~l~~~~~d~~v~iwd~ 198 (303)
..+.+++ |+|++ ..+++++.|+.|++||+++++... ...|...|.+++|+| ++++|++++.||.|++||+
T Consensus 165 ~~v~~~~~~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~ 241 (357)
T 3i2n_A 165 RDCWTVAFGNAYNQEE--RVVCAGYDNGDIKLFDLRNMALRW-ETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDM 241 (357)
T ss_dssp CCEEEEEEECCCC-CC--CEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEE
T ss_pred CceEEEEEEeccCCCC--CEEEEEccCCeEEEEECccCceee-ecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeC
Confidence 4688888 55654 589999999999999999888754 356788999999999 8999999999999999999
Q ss_pred CCCceEEEe------cCCCeEEEEEEcCCCe-EE-EEEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeecccc
Q 048118 199 AEGKRLYSL------DAGAVIHALCFSPNRY-WL-CAATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKK 270 (303)
Q Consensus 199 ~~~~~~~~~------~~~~~v~~~~~s~~~~-~l-~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (303)
++++.+..+ .....+.+++|+|++. ++ +++.|+.|++||++.+.........-.... ..........+..+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~ 320 (357)
T 3i2n_A 242 RTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMG-VAGSVSLLQNVTLS 320 (357)
T ss_dssp EEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCC-CCCEEEEEEEEECC
T ss_pred cCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccc-cccccceeeccccC
Confidence 876544333 3567899999999976 44 556799999999976543221110000000 00000122344556
Q ss_pred ceeEEEEEEcCCCCEEE-EeecCCeEEEEeccc
Q 048118 271 NIYCTSLNWSVDGSTLF-SGYTDGVIRVWGIGR 302 (303)
Q Consensus 271 ~~~~~~~~~sp~~~~l~-~gs~Dg~v~~w~~~~ 302 (303)
...+.+++|+|++++|+ +|+.||.|++||+.+
T Consensus 321 ~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 321 TQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTK 353 (357)
T ss_dssp SSCEEEEEECSSSTTEEEEEETTSEEEEEEECC
T ss_pred CCCeeEEEEcCCCCeEEEEecCCCcEEEEECCC
Confidence 66789999999999998 899999999999865
No 38
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=3.4e-33 Score=240.80 Aligned_cols=281 Identities=18% Similarity=0.240 Sum_probs=207.6
Q ss_pred ccccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEE
Q 048118 9 GTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVA 88 (303)
Q Consensus 9 ~~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~ 88 (303)
..+++|.+.|++++|+|.++++|++|+.|+.|++|++............ ...........+|...|.+++
T Consensus 37 ~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~v~~~~ 106 (408)
T 4a11_B 37 DVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCK----------AVCSIGRDHPDVHRYSVETVQ 106 (408)
T ss_dssp EECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEEC----------EEEEECTTCTTCCSSCEEEEE
T ss_pred eeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEecc----------ccccccccccccCCCcEEEEE
Confidence 4577899999999999934579999999999999999754322111100 000011122346899999999
Q ss_pred Eee-CCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCC-CCEEEEEeCCCcEEEEECCCceeEEEEc
Q 048118 89 FSI-DNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTL-QPTIVSASWDRTVKVWNLSNCKLRATLA 166 (303)
Q Consensus 89 ~~~-~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~dg~i~iwd~~~~~~~~~~~ 166 (303)
|+| ++.++++++.|+.|++||+.......... +...+.++.++|... ...+++++.++.|++||+++++....+.
T Consensus 107 ~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~ 183 (408)
T 4a11_B 107 WYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN---FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQ 183 (408)
T ss_dssp ECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE---CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEEC
T ss_pred EccCCCcEEEEEeCCCeEEEeeCCCCccceecc---CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeec
Confidence 999 77899999999999999987544332221 455688899988542 2478999999999999999998888999
Q ss_pred CCCCCeeEEEECCCCC-EEEEEeCCCeEEEEeCCCCc-eEEEe----------------cCCCeEEEEEEcCCCeEE-EE
Q 048118 167 GHTGYVNTVAVSPDGS-LCASGGKDGVILLWDLAEGK-RLYSL----------------DAGAVIHALCFSPNRYWL-CA 227 (303)
Q Consensus 167 ~~~~~i~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~-~~~~~----------------~~~~~v~~~~~s~~~~~l-~~ 227 (303)
.|...|.+++|+|+++ +|++++.||.|++||++.+. .+..+ .....+.+++|+|++.++ ++
T Consensus 184 ~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 263 (408)
T 4a11_B 184 GHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTV 263 (408)
T ss_dssp CCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEE
T ss_pred CCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEe
Confidence 9999999999999998 58999999999999998765 33332 234679999999998655 45
Q ss_pred EcCCcEEEEeCCCCceeeeeeecccccc---------------------------ccccCccceeeccccceeEEEEEEc
Q 048118 228 ATEQSIKIWDLESKSIVEDLKVDLKTEA---------------------------EKSEATTATTTIKKKNIYCTSLNWS 280 (303)
Q Consensus 228 ~~~~~i~iwd~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~s 280 (303)
+.|+.|++||+++++............. ...........+..+...+.+++|+
T Consensus 264 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s 343 (408)
T 4a11_B 264 GTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQ 343 (408)
T ss_dssp ETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEE
T ss_pred cCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEc
Confidence 5799999999988765432211100000 0001112233445667778999999
Q ss_pred CCCCEEEEeecCCeEEEEeccc
Q 048118 281 VDGSTLFSGYTDGVIRVWGIGR 302 (303)
Q Consensus 281 p~~~~l~~gs~Dg~v~~w~~~~ 302 (303)
|++++|++|+.||.|++|++..
T Consensus 344 ~~~~~l~s~~~dg~i~iw~~~~ 365 (408)
T 4a11_B 344 SNFQELYSGSRDCNILAWVPSL 365 (408)
T ss_dssp TTTTEEEEEETTSCEEEEEECC
T ss_pred CCCCEEEEECCCCeEEEEeCCC
Confidence 9999999999999999999864
No 39
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.2e-35 Score=250.28 Aligned_cols=248 Identities=18% Similarity=0.176 Sum_probs=186.7
Q ss_pred cccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEee
Q 048118 12 RAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSI 91 (303)
Q Consensus 12 ~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~ 91 (303)
+.|.+.|++++|+|++ ++|++|+.|+.|++|++..... .. ...+.+|.+.|.+++|+|
T Consensus 8 ~~~~~~v~~~~~s~~g-~~l~~~~~d~~i~iw~~~~~~~---~~------------------~~~~~~h~~~v~~~~~s~ 65 (377)
T 3dwl_C 8 HILPKPSYEHAFNSQR-TEFVTTTATNQVELYEQDGNGW---KH------------------ARTFSDHDKIVTCVDWAP 65 (377)
T ss_dssp EECSSCCSCCEECSSS-SEEECCCSSSCBCEEEEETTEE---EE------------------CCCBCCCSSCEEEEEECT
T ss_pred ecCCCcEEEEEECCCC-CEEEEecCCCEEEEEEccCCce---EE------------------EEEEecCCceEEEEEEeC
Confidence 3456789999999975 6999999999999999864310 00 123567999999999999
Q ss_pred CCCEEEEEeCCCcEEEEecCCce-eeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCce---eEEEEcC
Q 048118 92 DNRQIVSASRDRTIKLWNTLGEC-KYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCK---LRATLAG 167 (303)
Q Consensus 92 ~~~~l~t~~~d~~i~vw~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~---~~~~~~~ 167 (303)
++.+|++++.|+.|++||+.... .........|...|.+++|+|++ ..+++++.|+.|++||+++++ ....+..
T Consensus 66 ~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 143 (377)
T 3dwl_C 66 KSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNE--DKFAVGSGARVISVCYFEQENDWWVSKHLKR 143 (377)
T ss_dssp TTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTS--SCCEEEESSSCEEECCC-----CCCCEEECS
T ss_pred CCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCC--CEEEEEecCCeEEEEEECCcccceeeeEeec
Confidence 99999999999999999986543 11223334678889999999976 468999999999999998776 4667777
Q ss_pred -CCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCC------------------CceEEEecCCCeEEEEEEcCCCeEE-EE
Q 048118 168 -HTGYVNTVAVSPDGSLCASGGKDGVILLWDLAE------------------GKRLYSLDAGAVIHALCFSPNRYWL-CA 227 (303)
Q Consensus 168 -~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~------------------~~~~~~~~~~~~v~~~~~s~~~~~l-~~ 227 (303)
|...|++++|+|++++|++++.|++|++||++. ++.+..+.....|.+++|+|++.++ ++
T Consensus 144 ~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~ 223 (377)
T 3dwl_C 144 PLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYA 223 (377)
T ss_dssp SCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEE
T ss_pred ccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEE
Confidence 999999999999999999999999999999852 3444455556789999999998655 45
Q ss_pred EcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEec
Q 048118 228 ATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 300 (303)
Q Consensus 228 ~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~ 300 (303)
+.|+.|++||+++++..... ...+..+...+.+++|+|++++|++|+.|+.+ +|+.
T Consensus 224 ~~d~~i~iwd~~~~~~~~~~----------------~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~ 279 (377)
T 3dwl_C 224 GHDSSVTIAYPSAPEQPPRA----------------LITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQG 279 (377)
T ss_dssp ETTTEEC-CEECSTTSCEEE----------------CCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECC
T ss_pred eCCCcEEEEECCCCCCccee----------------eEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEe
Confidence 67999999999887641110 01123345567889999999999999877777 6654
No 40
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.5e-33 Score=234.22 Aligned_cols=223 Identities=22% Similarity=0.344 Sum_probs=186.5
Q ss_pred eecccccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCc---------
Q 048118 6 VLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQ--------- 76 (303)
Q Consensus 6 ~~~~~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--------- 76 (303)
.+...+.+|...|.++.+++++ .++++++.|++|++||+.... ....+..+...+..+.++|+++
T Consensus 71 ~~~~~l~gh~~~v~~~~~~~~~-~~l~s~s~D~~i~lWd~~~~~-----~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg 144 (321)
T 3ow8_A 71 DLQWSLEGHQLGVVSVDISHTL-PIAASSSLDAHIRLWDLENGK-----QIKSIDAGPVDAWTLAFSPDSQYLATGTHVG 144 (321)
T ss_dssp EEEEEECCCSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTTE-----EEEEEECCTTCCCCEEECTTSSEEEEECTTS
T ss_pred eeeeeeccCCCCEEEEEECCCC-CEEEEEeCCCcEEEEECCCCC-----EEEEEeCCCccEEEEEECCCCCEEEEEcCCC
Confidence 3445689999999999999875 689999999999999987543 2333445555566677777653
Q ss_pred ---------------eecccCCEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCE
Q 048118 77 ---------------FVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPT 141 (303)
Q Consensus 77 ---------------~~~h~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 141 (303)
+..|...|.+++|+|++++|++++.|+.|++||+..... +.....|...|.+++|+|++ ..
T Consensus 145 ~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~--~~~~~~h~~~v~~l~~spd~--~~ 220 (321)
T 3ow8_A 145 KVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKL--LHTLEGHAMPIRSLTFSPDS--QL 220 (321)
T ss_dssp EEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE--EEEECCCSSCCCEEEECTTS--CE
T ss_pred cEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcE--EEEEcccCCceeEEEEcCCC--CE
Confidence 235677899999999999999999999999999865432 22234678889999999986 57
Q ss_pred EEEEeCCCcEEEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEec-CCCeEEEEEEcC
Q 048118 142 IVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLD-AGAVIHALCFSP 220 (303)
Q Consensus 142 ~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~s~ 220 (303)
+++++.|+.|++||+++++....+.+|...|.+++|+|++++|++++.|++|++||+++++++.++. ....|.+++|+|
T Consensus 221 l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~ 300 (321)
T 3ow8_A 221 LVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNG 300 (321)
T ss_dssp EEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT
T ss_pred EEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECC
Confidence 9999999999999999999999999999999999999999999999999999999999999988874 467899999999
Q ss_pred CCeEE-EEEcCCcEEEEeC
Q 048118 221 NRYWL-CAATEQSIKIWDL 238 (303)
Q Consensus 221 ~~~~l-~~~~~~~i~iwd~ 238 (303)
++..| +++.|+.|++||.
T Consensus 301 ~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 301 NGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp TSSEEEEEETTCCEEEEEC
T ss_pred CCCEEEEEeCCCeEEEEeC
Confidence 98654 5567999999996
No 41
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.6e-34 Score=246.72 Aligned_cols=265 Identities=17% Similarity=0.283 Sum_probs=209.6
Q ss_pred cccceeeeecCCCCCcEEEEe----------cCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCc-------
Q 048118 14 HTDMVTAIATPIDNSDMIVTA----------SRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQ------- 76 (303)
Q Consensus 14 h~~~v~~v~~~~~~~~~~~t~----------s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------- 76 (303)
+...|.+++|+|++..++++| +.|++|++|++...... ..... ..|...|.++.+++++.
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~--~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~ 87 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSE--KPIAS-LQVDSKFNDLDWSHNNKIIAGALD 87 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGC--SCSCC-CCCSSCEEEEEECSSSSCEEEEES
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCC--cEEEE-EecCCceEEEEECCCCCeEEEEcc
Confidence 345799999999876799999 89999999998754321 01111 23566788888877653
Q ss_pred ---------------------eecccCCEEEEEEeeC-CCEEEEEeCCCcEEEEecCCce-------eeeeecCCCCccc
Q 048118 77 ---------------------FVGHTKDVLSVAFSID-NRQIVSASRDRTIKLWNTLGEC-------KYTIQEGDAHTEW 127 (303)
Q Consensus 77 ---------------------~~~h~~~i~~i~~~~~-~~~l~t~~~d~~i~vw~~~~~~-------~~~~~~~~~~~~~ 127 (303)
+.+|.+.|.+++|+|+ +.+|++++.|+.|++||+.... .........|...
T Consensus 88 dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (416)
T 2pm9_A 88 NGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDE 167 (416)
T ss_dssp SSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCC
T ss_pred CCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCC
Confidence 2368889999999998 8999999999999999986543 1112223457788
Q ss_pred eEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEEEcCC------CCCeeEEEECCCC-CEEEEEeCCC---eEEEEe
Q 048118 128 VSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGH------TGYVNTVAVSPDG-SLCASGGKDG---VILLWD 197 (303)
Q Consensus 128 i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~------~~~i~~~~~~~~~-~~l~~~~~d~---~v~iwd 197 (303)
|.+++|+|++ ...+++++.|+.|++||+++++....+..+ ...+.+++|+|++ .++++++.|+ .|++||
T Consensus 168 v~~~~~~~~~-~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d 246 (416)
T 2pm9_A 168 VISLAWNQSL-AHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWD 246 (416)
T ss_dssp CCEEEECSSC-TTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEE
T ss_pred eeEEEeCCCC-CcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEe
Confidence 9999999984 257999999999999999999888888776 7889999999987 6899999998 999999
Q ss_pred CCCC-ceEEEec--CCCeEEEEEEcC-CCeEE-EEEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccce
Q 048118 198 LAEG-KRLYSLD--AGAVIHALCFSP-NRYWL-CAATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNI 272 (303)
Q Consensus 198 ~~~~-~~~~~~~--~~~~v~~~~~s~-~~~~l-~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (303)
++++ +.+..+. ....+.+++|+| ++.++ +++.|+.|++||+++++.+..+. .+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~--------------------~~~~ 306 (416)
T 2pm9_A 247 LRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFP--------------------ARGN 306 (416)
T ss_dssp TTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEE--------------------CSSS
T ss_pred CCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeec--------------------CCCC
Confidence 9986 4555554 567899999999 76554 55679999999999887665443 2333
Q ss_pred eEEEEEEcCCC-CEEEEeecCCeEEEEeccc
Q 048118 273 YCTSLNWSVDG-STLFSGYTDGVIRVWGIGR 302 (303)
Q Consensus 273 ~~~~~~~sp~~-~~l~~gs~Dg~v~~w~~~~ 302 (303)
.+.+++|+|++ .+|++++.||.|++|++..
T Consensus 307 ~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~ 337 (416)
T 2pm9_A 307 WCFKTKFAPEAPDLFACASFDNKIEVQTLQN 337 (416)
T ss_dssp CCCCEEECTTCTTEEEECCSSSEEEEEESCC
T ss_pred ceEEEEECCCCCCEEEEEecCCcEEEEEccC
Confidence 45679999999 7999999999999999853
No 42
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=5.5e-34 Score=249.15 Aligned_cols=268 Identities=17% Similarity=0.273 Sum_probs=191.5
Q ss_pred ccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceeccc-----------
Q 048118 13 AHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHT----------- 81 (303)
Q Consensus 13 ~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~----------- 81 (303)
.|.+.|++++|+|++ ++||+|+.||.|++|++.......... ... ... ...+.+|.
T Consensus 26 ~~~~~V~~v~~s~~g-~~la~g~~dg~v~iw~~~~~~~~~~~~------~~~-~~~-----~~~~~~h~~~~~~~~~~~~ 92 (447)
T 3dw8_B 26 AEADIISTVEFNHSG-ELLATGDKGGRVVIFQQEQENKIQSHS------RGE-YNV-----YSTFQSHEPEFDYLKSLEI 92 (447)
T ss_dssp CGGGSEEEEEECSSS-SEEEEEETTSEEEEEEECC-----CCC------CCC-EEE-----EEEEECCCCEEEGGGTEEE
T ss_pred cccCcEEEEEECCCC-CEEEEEcCCCeEEEEEecCCCCCCccc------ccc-eeE-----ecccccccccccccccccc
Confidence 367899999999864 799999999999999987543110000 000 000 01345666
Q ss_pred -CCEEEEEEeeCC--CEEEEEeCCCcEEEEecCCceee--------------------------------------eeec
Q 048118 82 -KDVLSVAFSIDN--RQIVSASRDRTIKLWNTLGECKY--------------------------------------TIQE 120 (303)
Q Consensus 82 -~~i~~i~~~~~~--~~l~t~~~d~~i~vw~~~~~~~~--------------------------------------~~~~ 120 (303)
+.|.+++|+|++ .+|++++.|+.|++|++...... ....
T Consensus 93 ~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (447)
T 3dw8_B 93 EEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIF 172 (447)
T ss_dssp CCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEE
T ss_pred cCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEe
Confidence 889999999998 79999999999999997432110 0011
Q ss_pred CCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCC-ceeEE-------EEcCCCCCeeEEEECCCC-CEEEEEeCCC
Q 048118 121 GDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSN-CKLRA-------TLAGHTGYVNTVAVSPDG-SLCASGGKDG 191 (303)
Q Consensus 121 ~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~-~~~~~-------~~~~~~~~i~~~~~~~~~-~~l~~~~~d~ 191 (303)
...|...|.+++|+|++ ..+++| .|+.|++||+.. .+... .+.+|...|++++|+|++ ++|++++.||
T Consensus 173 ~~~h~~~v~~~~~~~~~--~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg 249 (447)
T 3dw8_B 173 ANAHTYHINSISINSDY--ETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKG 249 (447)
T ss_dssp CSCCSSCCCEEEECTTS--SEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTS
T ss_pred ccCCCcceEEEEEcCCC--CEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCC
Confidence 34688889999999975 478887 899999999984 33333 255789999999999998 8999999999
Q ss_pred eEEEEeCCCCce----EEEecCCC-------------eEEEEEEcCCCeEEEEEcCCcEEEEeCCC-Cceeeeeeecccc
Q 048118 192 VILLWDLAEGKR----LYSLDAGA-------------VIHALCFSPNRYWLCAATEQSIKIWDLES-KSIVEDLKVDLKT 253 (303)
Q Consensus 192 ~v~iwd~~~~~~----~~~~~~~~-------------~v~~~~~s~~~~~l~~~~~~~i~iwd~~~-~~~~~~~~~~~~~ 253 (303)
+|++||+++++. +..+.... .|.+++|+|++.++++++++.|++||++. ++.+..+..+...
T Consensus 250 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iwd~~~~~~~~~~~~~~~~~ 329 (447)
T 3dw8_B 250 TIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVETYQVHEYL 329 (447)
T ss_dssp CEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEEEEEETTCCSSCSCCEESCGGG
T ss_pred eEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeCCeEEEEeCCCCccccceeeccccc
Confidence 999999998875 55554432 89999999999888777779999999987 6655544432100
Q ss_pred ccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEecc
Q 048118 254 EAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~ 301 (303)
...... . .-......+..++|+|++++|++|+.||.|++||+.
T Consensus 330 ~~~l~~----~-~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~ 372 (447)
T 3dw8_B 330 RSKLCS----L-YENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRN 372 (447)
T ss_dssp TTTHHH----H-HHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETT
T ss_pred cccccc----c-ccccccccceEEEECCCCCEEEEeccCCEEEEEEcC
Confidence 000000 0 000000012348899999999999999999999985
No 43
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.3e-33 Score=242.43 Aligned_cols=241 Identities=21% Similarity=0.366 Sum_probs=197.9
Q ss_pred cccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEeeCC
Q 048118 14 HTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSIDN 93 (303)
Q Consensus 14 h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~~~ 93 (303)
|...|++++|+|++ ++|++|+.||.|++|++...... . .+.+|...|.+++| ++
T Consensus 133 ~~~~v~~v~~s~~~-~~l~~~~~dg~i~iwd~~~~~~~-----~------------------~~~~~~~~v~~~~~--~~ 186 (401)
T 4aez_A 133 ESTYVASVKWSHDG-SFLSVGLGNGLVDIYDVESQTKL-----R------------------TMAGHQARVGCLSW--NR 186 (401)
T ss_dssp TTCCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEE-----E------------------EECCCSSCEEEEEE--ET
T ss_pred CCCCEEEEEECCCC-CEEEEECCCCeEEEEECcCCeEE-----E------------------EecCCCCceEEEEE--CC
Confidence 78899999999864 68999999999999998653211 1 23468889999999 45
Q ss_pred CEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEEEcCCCCCee
Q 048118 94 RQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVN 173 (303)
Q Consensus 94 ~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~ 173 (303)
.++++++.|+.|++||+..... .......|...|.+++|+|++ ..+++++.|+.|++||+++++....+..|...|.
T Consensus 187 ~~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~v~~~~~~~~~--~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~ 263 (401)
T 4aez_A 187 HVLSSGSRSGAIHHHDVRIANH-QIGTLQGHSSEVCGLAWRSDG--LQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVK 263 (401)
T ss_dssp TEEEEEETTSEEEEEETTSSSC-EEEEEECCSSCEEEEEECTTS--SEEEEEETTSCEEEEETTCSSEEEEECCCSSCCC
T ss_pred CEEEEEcCCCCEEEEecccCcc-eeeEEcCCCCCeeEEEEcCCC--CEEEEEeCCCeEEEccCCCCCccEEecCCcceEE
Confidence 7999999999999999863221 122223578889999999975 5899999999999999999998888999999999
Q ss_pred EEEECCCCC-EEEEEe--CCCeEEEEeCCCCceEEEecCCCeEEEEEEcCCCeEEEEE---cCCcEEEEeCCCCceeeee
Q 048118 174 TVAVSPDGS-LCASGG--KDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAA---TEQSIKIWDLESKSIVEDL 247 (303)
Q Consensus 174 ~~~~~~~~~-~l~~~~--~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~---~~~~i~iwd~~~~~~~~~~ 247 (303)
+++|+|++. ++++++ .|+.|++||+++++.+..+.....+.+++|+|++..++++ .++.|++||+++++.....
T Consensus 264 ~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~ 343 (401)
T 4aez_A 264 AVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQV 343 (401)
T ss_dssp EEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEE
T ss_pred EEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEE
Confidence 999999764 666655 7999999999999999888888899999999998777653 5899999999876554332
Q ss_pred eeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEecc
Q 048118 248 KVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~ 301 (303)
. +..+...+.+++|+|++++|++|+.||.|++|++.
T Consensus 344 ~------------------~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~ 379 (401)
T 4aez_A 344 D------------------IPAHDTRVLYSALSPDGRILSTAASDENLKFWRVY 379 (401)
T ss_dssp E------------------EECCSSCCCEEEECTTSSEEEEECTTSEEEEEECC
T ss_pred E------------------ecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECC
Confidence 2 22344456789999999999999999999999984
No 44
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.2e-34 Score=246.41 Aligned_cols=271 Identities=16% Similarity=0.188 Sum_probs=191.6
Q ss_pred eecccccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEE
Q 048118 6 VLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVL 85 (303)
Q Consensus 6 ~~~~~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~ 85 (303)
..+..+.+|.+.|++++|+|++ ++|++++.|++|++|++....... . ...+.+|...|.
T Consensus 46 ~~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~d~~v~vwd~~~~~~~~--~------------------~~~~~~~~~~v~ 104 (377)
T 3dwl_C 46 KHARTFSDHDKIVTCVDWAPKS-NRIVTCSQDRNAYVYEKRPDGTWK--Q------------------TLVLLRLNRAAT 104 (377)
T ss_dssp EECCCBCCCSSCEEEEEECTTT-CCEEEEETTSSEEEC------CCC--C------------------EEECCCCSSCEE
T ss_pred EEEEEEecCCceEEEEEEeCCC-CEEEEEeCCCeEEEEEcCCCCcee--e------------------eeEecccCCceE
Confidence 4566789999999999999875 689999999999999987543000 0 012456889999
Q ss_pred EEEEeeCCCEEEEEeCCCcEEEEecCCceee-eeecCCC-CccceEEEEEcCCCCCCEEEEEeCCCcEEEEECC------
Q 048118 86 SVAFSIDNRQIVSASRDRTIKLWNTLGECKY-TIQEGDA-HTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLS------ 157 (303)
Q Consensus 86 ~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~-~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~------ 157 (303)
+++|+|++.+|++++.|+.|++||+...... ....... |...|.+++|+|++ ..+++++.|+.|++||+.
T Consensus 105 ~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~l~~~~~d~~i~iwd~~~~~~~~ 182 (377)
T 3dwl_C 105 FVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNN--VLLAAGCADRKAYVLSAYVRDVDA 182 (377)
T ss_dssp EEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTS--SEEEEEESSSCEEEEEECCSSCC-
T ss_pred EEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCC--CEEEEEeCCCEEEEEEEEecccCC
Confidence 9999999999999999999999998654311 1111223 78899999999975 589999999999999985
Q ss_pred ------------CceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCce----EEEec-CCCeEEEEEEcC
Q 048118 158 ------------NCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKR----LYSLD-AGAVIHALCFSP 220 (303)
Q Consensus 158 ------------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~----~~~~~-~~~~v~~~~~s~ 220 (303)
.+++...+ +|...|++++|+|++++|++++.|++|++||+++++. +..+. ....+.+++|+|
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 261 (377)
T 3dwl_C 183 KPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWAN 261 (377)
T ss_dssp CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEE
T ss_pred Cccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcC
Confidence 24455556 8999999999999999999999999999999998876 44443 356799999999
Q ss_pred CCeEEEEEcCCcEEEEeCCCCce--eeeeeecccccc-----------ccccCc-------------------cceeecc
Q 048118 221 NRYWLCAATEQSIKIWDLESKSI--VEDLKVDLKTEA-----------EKSEAT-------------------TATTTIK 268 (303)
Q Consensus 221 ~~~~l~~~~~~~i~iwd~~~~~~--~~~~~~~~~~~~-----------~~~~~~-------------------~~~~~~~ 268 (303)
++.+++++.++.+.+|+...... ...+........ ...... .......
T Consensus 262 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 341 (377)
T 3dwl_C 262 ESAIVAAGYNYSPILLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPT 341 (377)
T ss_dssp TTEEEEEESSSSEEEECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSS
T ss_pred CCCEEEEEcCCcEEEEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccchhhccccccccccCc
Confidence 99999999988888998764321 111111000000 000000 0000112
Q ss_pred ccceeEEEEEEcCCC-C---EEEEeecCCeEEEEec
Q 048118 269 KKNIYCTSLNWSVDG-S---TLFSGYTDGVIRVWGI 300 (303)
Q Consensus 269 ~~~~~~~~~~~sp~~-~---~l~~gs~Dg~v~~w~~ 300 (303)
.|...++++.+.+.. . .|+||+.||.|++||+
T Consensus 342 ~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 342 VHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp SCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred cccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 256667888865543 3 6999999999999986
No 45
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=8e-33 Score=232.50 Aligned_cols=259 Identities=19% Similarity=0.313 Sum_probs=209.3
Q ss_pred cccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCcee---------------
Q 048118 14 HTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFV--------------- 78 (303)
Q Consensus 14 h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--------------- 78 (303)
|.+.|.+++++|++ ++++++..++.+..|..... .......+|...|.++.+++++++.
T Consensus 8 ~~~~v~~~~~s~dg-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~h~~~v~~~~~~~~~~~l~~~~dg~i~iw~~~~ 81 (337)
T 1gxr_A 8 GSKPAYSFHVTADG-QMQPVPFPPDALIGPGIPRH-----ARQINTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISH 81 (337)
T ss_dssp EEEECCEEEECSSS-CEEECCCCTTSSSSTTCCSE-----EEEEEEECCSSCCCEEEECSSSSEEEEECBSEEEEEETTS
T ss_pred cCCceeEEEECCCC-CEEEeecCCCcEeccccCCc-----cccceeccCCCceEEEEEecCCcEEEEcCCCeEEEEECCC
Confidence 45789999999986 57777777776666643321 1122233577788888888776421
Q ss_pred -------------cccCCEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEE
Q 048118 79 -------------GHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSA 145 (303)
Q Consensus 79 -------------~h~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 145 (303)
+|...|.+++|+|+++++++++.|+.|++|+..............|...+.+++|+|++ ..++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~l~~~ 159 (337)
T 1gxr_A 82 PGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDS--KVCFSC 159 (337)
T ss_dssp TTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTS--SEEEEE
T ss_pred CCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCC--CEEEEE
Confidence 57889999999999999999999999999998654322222334567789999999975 579999
Q ss_pred eCCCcEEEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEecCCCeEEEEEEcCCCeEE
Q 048118 146 SWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWL 225 (303)
Q Consensus 146 ~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l 225 (303)
+.|+.|++||+++++....+..|...+.+++|+|++++|++++.|+.|++||+++++.+..+.....+.+++|+|++.++
T Consensus 160 ~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l 239 (337)
T 1gxr_A 160 CSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWL 239 (337)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEE
T ss_pred eCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999988888888889999999998766
Q ss_pred EE-EcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEecc
Q 048118 226 CA-ATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 226 ~~-~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~ 301 (303)
++ +.++.|++||+++++... +..+...+.+++|+|++++|++++.||.|++|++.
T Consensus 240 ~~~~~~~~i~~~~~~~~~~~~---------------------~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~ 295 (337)
T 1gxr_A 240 AVGMESSNVEVLHVNKPDKYQ---------------------LHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTP 295 (337)
T ss_dssp EEEETTSCEEEEETTSSCEEE---------------------ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred EEEcCCCcEEEEECCCCCeEE---------------------EcCCccceeEEEECCCCCEEEEecCCCcEEEEECC
Confidence 55 568999999998765421 12234457889999999999999999999999975
No 46
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=2e-33 Score=245.05 Aligned_cols=272 Identities=21% Similarity=0.326 Sum_probs=204.5
Q ss_pred cccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEE
Q 048118 10 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAF 89 (303)
Q Consensus 10 ~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~ 89 (303)
...+|.+.|++++|+|.++.+|++++.||.|++|++........ ..+. ..+...+.+|...|.+++|
T Consensus 123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~-----~~~~--------~~~~~~~~~h~~~v~~l~~ 189 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPE-----PSGE--------CQPDLRLRGHQKEGYGLSW 189 (430)
T ss_dssp EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCC-----TTCC--------CCCSEEEECCSSCCCCEEE
T ss_pred EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccC-----cccc--------CCCcEEecCCCCCeEEEEe
Confidence 46779999999999997678999999999999999975321100 0000 0111245689999999999
Q ss_pred eeCCC-EEEEEeCCCcEEEEecCCcee-----eeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCc---e
Q 048118 90 SIDNR-QIVSASRDRTIKLWNTLGECK-----YTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNC---K 160 (303)
Q Consensus 90 ~~~~~-~l~t~~~d~~i~vw~~~~~~~-----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~---~ 160 (303)
+|++. +|++|+.|+.|++|++..... ........|...|.+++|+|.. ...+++++.|+.|++||+++. +
T Consensus 190 ~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~-~~~l~s~~~dg~i~i~d~~~~~~~~ 268 (430)
T 2xyi_A 190 NPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLH-ESLFGSVADDQKLMIWDTRNNNTSK 268 (430)
T ss_dssp CTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSC-TTEEEEEETTSEEEEEETTCSCSSS
T ss_pred CCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCC-CCEEEEEeCCCeEEEEECCCCCCCc
Confidence 99988 999999999999999865211 1122234678889999999954 358899999999999999876 5
Q ss_pred eEEEEcCCCCCeeEEEECCCCC-EEEEEeCCCeEEEEeCCC-CceEEEec-CCCeEEEEEEcCCC-e-EEEEEcCCcEEE
Q 048118 161 LRATLAGHTGYVNTVAVSPDGS-LCASGGKDGVILLWDLAE-GKRLYSLD-AGAVIHALCFSPNR-Y-WLCAATEQSIKI 235 (303)
Q Consensus 161 ~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~v~iwd~~~-~~~~~~~~-~~~~v~~~~~s~~~-~-~l~~~~~~~i~i 235 (303)
....+..|...|++++|+|+++ +|++|+.||+|++||++. ++++..+. ....|.+++|+|++ . +++++.|+.|++
T Consensus 269 ~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~i 348 (430)
T 2xyi_A 269 PSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHV 348 (430)
T ss_dssp CSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEE
T ss_pred ceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEE
Confidence 6677788999999999999887 688999999999999987 45566664 56789999999987 3 455667999999
Q ss_pred EeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCC-EEEEeecCCeEEEEecc
Q 048118 236 WDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGS-TLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 236 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~-~l~~gs~Dg~v~~w~~~ 301 (303)
||++......... ..............++...+.+++|+|+++ +|++++.||.|++|++.
T Consensus 349 wd~~~~~~~~~~~------~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 349 WDLSKIGEEQSTE------DAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp EEGGGTTCCCCHH------HHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred EeCCCCccccCcc------ccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcc
Confidence 9997632111000 000000112233445666789999999999 89999999999999985
No 47
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8e-35 Score=258.50 Aligned_cols=246 Identities=13% Similarity=0.133 Sum_probs=181.7
Q ss_pred cccceeeeecCCCC-C-------cEEEE-------------------ecCCCcEEEEEcccCccccceeeeeecCCCcce
Q 048118 14 HTDMVTAIATPIDN-S-------DMIVT-------------------ASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFV 66 (303)
Q Consensus 14 h~~~v~~v~~~~~~-~-------~~~~t-------------------~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i 66 (303)
+.+.|.+++|+|.. + .+||+ ++.|++|+||++...+.... ..
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~-~~---------- 200 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCV-KV---------- 200 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEE-EE----------
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCce-EE----------
Confidence 45788999999864 1 35554 66889999999864321100 00
Q ss_pred EEEEeCCCCceecccCCEEEEEEeeC------CCEEEEEeCCCcEEEEecCCceee---------eeecCCCCccceEEE
Q 048118 67 QDVVLSSDGQFVGHTKDVLSVAFSID------NRQIVSASRDRTIKLWNTLGECKY---------TIQEGDAHTEWVSCV 131 (303)
Q Consensus 67 ~~~~~~~~~~~~~h~~~i~~i~~~~~------~~~l~t~~~d~~i~vw~~~~~~~~---------~~~~~~~~~~~i~~~ 131 (303)
..+.+|.+.|.+++|+|+ +.+||+++.|++|++||+...... .......|...|.++
T Consensus 201 --------~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv 272 (524)
T 2j04_B 201 --------QTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTF 272 (524)
T ss_dssp --------EEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEE
T ss_pred --------EEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEE
Confidence 013456788999999986 579999999999999998543110 011224577889999
Q ss_pred EEcCCCCCCEEEEEeCCCcEEEEECCCc-eeEEEEcCCCCCeeEE--EECCCC-CEEEEEeCCCeEEEEeCCCCceEEEe
Q 048118 132 RFSPNTLQPTIVSASWDRTVKVWNLSNC-KLRATLAGHTGYVNTV--AVSPDG-SLCASGGKDGVILLWDLAEGKRLYSL 207 (303)
Q Consensus 132 ~~~~~~~~~~~~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~i~~~--~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~ 207 (303)
+|+|+ ..+++|+.||+|++||++++ .+...+.+|...|+++ .|+|++ ++|++++.|++|++||+++++.+..+
T Consensus 273 ~~s~~---~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~ 349 (524)
T 2j04_B 273 DFLSP---TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTT 349 (524)
T ss_dssp EESSS---SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEE
T ss_pred EecCC---CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccc
Confidence 99985 37999999999999999865 3456688999999999 568887 89999999999999999987655443
Q ss_pred cC---CCeEEEEEEcCCCeEE-EEEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCC
Q 048118 208 DA---GAVIHALCFSPNRYWL-CAATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDG 283 (303)
Q Consensus 208 ~~---~~~v~~~~~s~~~~~l-~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~ 283 (303)
.. ...+.+++|+|++..+ +++.|+.|++||++++..+.. +.+|...+++++|+|++
T Consensus 350 ~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~--------------------l~gH~~~V~sva~Sp~g 409 (524)
T 2j04_B 350 VSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHP--------------------LVSRETTITAIGVSRLH 409 (524)
T ss_dssp EEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEE--------------------EEECSSCEEEEECCSSC
T ss_pred ccccccCcccceEeCCCcCeEEEeCCCCcEEEEECccccccee--------------------eecCCCceEEEEeCCCC
Confidence 21 1347889999987555 455688999999987654332 23355568899999999
Q ss_pred CEEEEeecCCeEEEEecc
Q 048118 284 STLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 284 ~~l~~gs~Dg~v~~w~~~ 301 (303)
++|++|+.||+|++||+.
T Consensus 410 ~~l~Sgs~Dgtv~lwd~~ 427 (524)
T 2j04_B 410 PMVLAGSADGSLIITNAA 427 (524)
T ss_dssp CBCEEEETTTEEECCBSC
T ss_pred CeEEEEECCCEEEEEech
Confidence 999999999999999974
No 48
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=6.7e-33 Score=236.59 Aligned_cols=259 Identities=10% Similarity=0.045 Sum_probs=184.7
Q ss_pred cceeeeecCCCCCcEEEEecCCC-------cEEEEEcccCccccc-----eeeeeecCCCcceEEEEeCCC---------
Q 048118 16 DMVTAIATPIDNSDMIVTASRDK-------SIIVWHLTKEEKTYG-----VARRRLTGHSHFVQDVVLSSD--------- 74 (303)
Q Consensus 16 ~~v~~v~~~~~~~~~~~t~s~d~-------~i~iw~~~~~~~~~~-----~~~~~~~~~~~~i~~~~~~~~--------- 74 (303)
-+|++++|+|++ .+|++||.|. .|++|++........ .....+..+...+.++.+..+
T Consensus 15 ~PV~sv~fs~dg-~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~~~~~~g~~~~ 93 (365)
T 4h5i_A 15 YPAYGAKFLNND-TLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASKGIILVGCNEN 93 (365)
T ss_dssp SCEEEEEEEETT-EEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEETTEEEEECCCC
T ss_pred CCEEEEEEeCCC-cEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCCCEEEEEECCC
Confidence 479999999875 6899987654 599999865432111 111223444444444433221
Q ss_pred ----------Cc-----------------------eecccCCEEEEEEeeCCCEEEE--EeCCCcEEEEecCCceeeeee
Q 048118 75 ----------GQ-----------------------FVGHTKDVLSVAFSIDNRQIVS--ASRDRTIKLWNTLGECKYTIQ 119 (303)
Q Consensus 75 ----------~~-----------------------~~~h~~~i~~i~~~~~~~~l~t--~~~d~~i~vw~~~~~~~~~~~ 119 (303)
+. ...+...+.+++|+|+|+++++ ++.|+.|+|||..........
T Consensus 94 ~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~ 173 (365)
T 4h5i_A 94 STKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEI 173 (365)
T ss_dssp HHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEE
T ss_pred ccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEe
Confidence 00 0123345788999999998764 457899999998654332222
Q ss_pred cCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEE--EEcCCCCCeeEEEECCCCCEEEEEeCCC----eE
Q 048118 120 EGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRA--TLAGHTGYVNTVAVSPDGSLCASGGKDG----VI 193 (303)
Q Consensus 120 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~d~----~v 193 (303)
.|...|.+++|+|++ ..+++++ ++.+++|+..+++... ....|...|.+++|+|+++.+++++.|+ .+
T Consensus 174 ---~~~~~V~~v~fspdg--~~l~s~s-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i 247 (365)
T 4h5i_A 174 ---ETRGEVKDLHFSTDG--KVVAYIT-GSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVL 247 (365)
T ss_dssp ---ECSSCCCEEEECTTS--SEEEEEC-SSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEE
T ss_pred ---CCCCceEEEEEccCC--ceEEecc-ceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEE
Confidence 245679999999986 4677776 4556666666655433 3456888899999999999999999887 68
Q ss_pred EEEeCCCCceE----EEe-cCCCeEEEEEEcCCCeEEEE-EcCCcEEEEeCCCCceeeeeeeccccccccccCccceeec
Q 048118 194 LLWDLAEGKRL----YSL-DAGAVIHALCFSPNRYWLCA-ATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTI 267 (303)
Q Consensus 194 ~iwd~~~~~~~----~~~-~~~~~v~~~~~s~~~~~l~~-~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (303)
+.||+...... ..+ .....|.+++|+|++.+|++ +.|+.|++||+++++.+..+ +
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~-------------------~ 308 (365)
T 4h5i_A 248 TKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIF-------------------K 308 (365)
T ss_dssp EEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEE-------------------T
T ss_pred eecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEe-------------------c
Confidence 88998766432 222 34568999999999987765 56899999999988766432 2
Q ss_pred cccceeEEEEEEcCCCCEEEEeecCCeEEEEec
Q 048118 268 KKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 300 (303)
Q Consensus 268 ~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~ 300 (303)
.+|...+++++|||||++|++||.|++||||++
T Consensus 309 ~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~i 341 (365)
T 4h5i_A 309 QAHSFAITEVTISPDSTYVASVSAANTIHIIKL 341 (365)
T ss_dssp TSSSSCEEEEEECTTSCEEEEEETTSEEEEEEC
T ss_pred CcccCCEEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 456677899999999999999999999999998
No 49
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.7e-32 Score=230.65 Aligned_cols=225 Identities=26% Similarity=0.425 Sum_probs=185.7
Q ss_pred eeeecCCCcceEEEEeCCCCce------------------------ecccCCEEEEEEeeCCCEEEEEeCCCcEEEEecC
Q 048118 56 RRRLTGHSHFVQDVVLSSDGQF------------------------VGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTL 111 (303)
Q Consensus 56 ~~~~~~~~~~i~~~~~~~~~~~------------------------~~h~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~ 111 (303)
...+.+|...|.++.+++++++ ..|...|.+++|+|++.++++++.|+.|++|++.
T Consensus 48 ~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~ 127 (340)
T 1got_B 48 RRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLK 127 (340)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETT
T ss_pred heeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECc
Confidence 4556778888888888877642 3678889999999999999999999999999985
Q ss_pred Ccee--eeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEeC
Q 048118 112 GECK--YTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGK 189 (303)
Q Consensus 112 ~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 189 (303)
.... ........|...|.++.|++++ .+++++.|+.|++||+.+++....+.+|.+.|.+++|+|++++|++|+.
T Consensus 128 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~---~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~ 204 (340)
T 1got_B 128 TREGNVRVSRELAGHTGYLSCCRFLDDN---QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGAC 204 (340)
T ss_dssp TCSBSCEEEEEEECCSSCEEEEEEEETT---EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred cCCCcceeEEEecCCCccEEEEEECCCC---cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeC
Confidence 4311 1122234678889999999864 5899999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEeCCCCceEEEec-CCCeEEEEEEcCCCeEEE-EEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeec
Q 048118 190 DGVILLWDLAEGKRLYSLD-AGAVIHALCFSPNRYWLC-AATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTI 267 (303)
Q Consensus 190 d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~-~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (303)
|++|++||+++++.+..+. +...|.+++|+|++.+++ ++.|+.|++||+++++.+..+..
T Consensus 205 d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~------------------ 266 (340)
T 1got_B 205 DASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSH------------------ 266 (340)
T ss_dssp TSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC------------------
T ss_pred CCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEcc------------------
Confidence 9999999999998888775 457899999999986655 55699999999998765543321
Q ss_pred cccceeEEEEEEcCCCCEEEEeecCCeEEEEecc
Q 048118 268 KKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 268 ~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~ 301 (303)
......+.+++|+|++++|++|+.||.|++||+.
T Consensus 267 ~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~ 300 (340)
T 1got_B 267 DNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL 300 (340)
T ss_dssp TTCCSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred CCcccceEEEEECCCCCEEEEECCCCeEEEEEcc
Confidence 1112246789999999999999999999999974
No 50
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.7e-32 Score=237.64 Aligned_cols=221 Identities=29% Similarity=0.471 Sum_probs=188.9
Q ss_pred eeecCCCcceEEEEeCCCCc------------------------eecccCCEEEEEEeeCCCEEEEEeCCCcEEEEecCC
Q 048118 57 RRLTGHSHFVQDVVLSSDGQ------------------------FVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG 112 (303)
Q Consensus 57 ~~~~~~~~~i~~~~~~~~~~------------------------~~~h~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~ 112 (303)
..+.+|...|.++.++|++. +.+|.+.|.+++|+|++.+|++|+.|+.|++||+..
T Consensus 102 ~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~ 181 (410)
T 1vyh_C 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG 181 (410)
T ss_dssp CEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTS
T ss_pred EeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Confidence 34667889999999988753 347999999999999999999999999999999865
Q ss_pred ceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCe
Q 048118 113 ECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGV 192 (303)
Q Consensus 113 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~ 192 (303)
... +.....|...|.+++|+|++ ..+++++.|+.|++||+.++.+...+.+|...|.++.++|++.+|++|+.|++
T Consensus 182 ~~~--~~~~~~h~~~V~~v~~~p~~--~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~ 257 (410)
T 1vyh_C 182 FEC--IRTMHGHDHNVSSVSIMPNG--DHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 257 (410)
T ss_dssp SCE--EECCCCCSSCEEEEEECSSS--SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred Cce--eEEEcCCCCCEEEEEEeCCC--CEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCe
Confidence 322 23345688899999999986 57999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCceEEEec-CCCeEEEEEEcCC--------------------C-eEEEEEcCCcEEEEeCCCCceeeeeeec
Q 048118 193 ILLWDLAEGKRLYSLD-AGAVIHALCFSPN--------------------R-YWLCAATEQSIKIWDLESKSIVEDLKVD 250 (303)
Q Consensus 193 v~iwd~~~~~~~~~~~-~~~~v~~~~~s~~--------------------~-~~l~~~~~~~i~iwd~~~~~~~~~~~~~ 250 (303)
|++||+++++....+. ....|.+++|+|+ + .+++++.|+.|++||+++++.+..+
T Consensus 258 v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~--- 334 (410)
T 1vyh_C 258 VRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL--- 334 (410)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEE---
T ss_pred EEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEE---
Confidence 9999999988877764 4678999999995 3 3556667999999999988765433
Q ss_pred cccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEecc
Q 048118 251 LKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~ 301 (303)
.+|...+.+++|+|++++|++|+.||+|++||+.
T Consensus 335 -----------------~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~ 368 (410)
T 1vyh_C 335 -----------------VGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368 (410)
T ss_dssp -----------------ECCSSCEEEEEECSSSSCEEEEETTTEEEEECCT
T ss_pred -----------------ECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 2344567889999999999999999999999984
No 51
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.7e-32 Score=238.42 Aligned_cols=243 Identities=23% Similarity=0.374 Sum_probs=196.4
Q ss_pred cccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEE
Q 048118 10 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAF 89 (303)
Q Consensus 10 ~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~ 89 (303)
.+++|.+.|++|+|+|++ .+||+|+.|++|++|++..... .. .+.+|...+.++++
T Consensus 142 ~~~~~~~~V~sv~fspdg-~~lasgs~Dg~v~iWd~~~~~~-----~~------------------~~~~h~~~v~~~s~ 197 (420)
T 4gga_A 142 QMEQPGEYISSVAWIKEG-NYLAVGTSSAEVQLWDVQQQKR-----LR------------------NMTSHSARVGSLSW 197 (420)
T ss_dssp ECCSTTCCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEE-----EE------------------EECCCSSCEEEEEE
T ss_pred EecCCCCcEEEEEECCCC-CEEEEEECCCeEEEEEcCCCcE-----EE------------------EEeCCCCceEEEee
Confidence 467888899999999875 6999999999999999865321 11 24568888888776
Q ss_pred eeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCce----eEEEE
Q 048118 90 SIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCK----LRATL 165 (303)
Q Consensus 90 ~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~----~~~~~ 165 (303)
+ +.++++|+.|+.+++|+....... ......|...+..+.++|++ ..+++++.|+.+++|+..+++ .....
T Consensus 198 ~--~~~l~sgs~d~~i~~~d~~~~~~~-~~~~~~h~~~~~~~~~~~~g--~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~ 272 (420)
T 4gga_A 198 N--SYILSSGSRSGHIHHHDVRVAEHH-VATLSGHSQEVCGLRWAPDG--RHLASGGNDNLVNVWPSAPGEGGWVPLQTF 272 (420)
T ss_dssp E--TTEEEEEETTSEEEEEETTSSSCE-EEEEECCSSCEEEEEECTTS--SEEEEEETTSCEEEEESSCCSSCSCCSEEE
T ss_pred C--CCEEEEEeCCCceeEeeeccccee-eEEecccccceeeeeecCCC--CeeeeeeccccceEEeeccccccceeeeee
Confidence 4 679999999999999997543222 22224677889999999986 579999999999999997654 34567
Q ss_pred cCCCCCeeEEEECCCCC-EEEE--EeCCCeEEEEeCCCCceEEEecCCCeEEEEEEcCCCeEEEE-E--cCCcEEEEeCC
Q 048118 166 AGHTGYVNTVAVSPDGS-LCAS--GGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCA-A--TEQSIKIWDLE 239 (303)
Q Consensus 166 ~~~~~~i~~~~~~~~~~-~l~~--~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~--~~~~i~iwd~~ 239 (303)
..|...|.+++|+|.+. .+++ |+.|++|++||+.+++.+..+.....+.++.|+|++..+++ + .|+.|++||++
T Consensus 273 ~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~ 352 (420)
T 4gga_A 273 TQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYP 352 (420)
T ss_dssp CCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETT
T ss_pred cccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECC
Confidence 78899999999999654 5555 45799999999999999988888888999999998755543 3 58999999999
Q ss_pred CCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEecc
Q 048118 240 SKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~ 301 (303)
+++.+..+ .+|...|++++|+|+|.+|+||+.||+|++||+.
T Consensus 353 ~~~~v~~l--------------------~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~ 394 (420)
T 4gga_A 353 TMAKVAEL--------------------KGHTSRVLSLTMSPDGATVASAAADETLRLWRCF 394 (420)
T ss_dssp TCCEEEEE--------------------CCCSSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred CCcEEEEE--------------------cCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 88766543 3456678899999999999999999999999984
No 52
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-33 Score=260.58 Aligned_cols=256 Identities=19% Similarity=0.306 Sum_probs=197.0
Q ss_pred ccccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEE
Q 048118 9 GTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVA 88 (303)
Q Consensus 9 ~~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~ 88 (303)
..+++|.+.|++++|+|++ ++|++|+.||+|++|++..... ... ..+.+|.+.|.+++
T Consensus 3 ~~l~gH~~~V~~l~~s~dg-~~latg~~dg~I~vwd~~~~~~---~~~------------------~~l~~h~~~V~~l~ 60 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYG-KRLATCSSDKTIKIFEVEGETH---KLI------------------DTLTGHEGPVWRVD 60 (753)
T ss_dssp -----CCCCEEEECCCSSS-CCEEEEETTTEEEEEEEETTEE---EEE------------------EEECCCSSCEEEEE
T ss_pred eecccCcceeEEEEECCCC-CeEEEEECCCcEEEEecCCCCC---ccc------------------eeccCCcCceEEEE
Confidence 4688999999999999875 6899999999999999863211 111 13457999999999
Q ss_pred EeeC--CCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCc--eeEEE
Q 048118 89 FSID--NRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNC--KLRAT 164 (303)
Q Consensus 89 ~~~~--~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~--~~~~~ 164 (303)
|+++ +.++++|+.|+.|++||+.............|...|.+++|+|+.....+++|+.||.|++||+.++ .....
T Consensus 61 ~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~ 140 (753)
T 3jro_A 61 WAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPII 140 (753)
T ss_dssp ECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEE
T ss_pred ecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeE
Confidence 9988 8999999999999999986653333344456888999999999732258999999999999999876 34456
Q ss_pred EcCCCCCeeEEEECC-------------CCCEEEEEeCCCeEEEEeCCCCc----eEEEec-CCCeEEEEEEcCC---Ce
Q 048118 165 LAGHTGYVNTVAVSP-------------DGSLCASGGKDGVILLWDLAEGK----RLYSLD-AGAVIHALCFSPN---RY 223 (303)
Q Consensus 165 ~~~~~~~i~~~~~~~-------------~~~~l~~~~~d~~v~iwd~~~~~----~~~~~~-~~~~v~~~~~s~~---~~ 223 (303)
+.+|...|.+++|+| ++.+|++|+.||+|++||++++. .+..+. +...|.+++|+|+ +.
T Consensus 141 ~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~ 220 (753)
T 3jro_A 141 IDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRS 220 (753)
T ss_dssp EECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSE
T ss_pred eecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCC
Confidence 778999999999999 58999999999999999998764 333443 4678999999999 76
Q ss_pred EEE-EEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEecc
Q 048118 224 WLC-AATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 224 ~l~-~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~ 301 (303)
+++ ++.||.|++||+++++...... ......+...+++++|+|++.+|++|+.||.|++|++.
T Consensus 221 ~l~s~s~Dg~I~iwd~~~~~~~~~~~---------------~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 221 YLASVSQDRTCIIWTQDNEQGPWKKT---------------LLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (753)
T ss_dssp EEEEEESSSCEEEEEESSSSSCCBCC---------------BSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCC
T ss_pred EEEEEecCCEEEEecCCCCCCcceeE---------------EeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecC
Confidence 665 4569999999998754211100 01112234456789999999999999999999999975
No 53
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=6.9e-33 Score=235.85 Aligned_cols=228 Identities=20% Similarity=0.223 Sum_probs=181.2
Q ss_pred cccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCc-------------
Q 048118 10 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQ------------- 76 (303)
Q Consensus 10 ~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------------- 76 (303)
...+|.+.|++++|+|++ .+++++.|++|++||+...+... .......+|...|.++.++|+++
T Consensus 89 ~~~~~~~~V~~~~~s~d~--~~l~~s~dg~v~lWd~~~~~~~~-~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~i 165 (357)
T 4g56_B 89 AGVQTEAGVTDVAWVSEK--GILVASDSGAVELWEILEKESLL-VNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKV 165 (357)
T ss_dssp EEEECSSCEEEEEEETTT--EEEEEETTSCEEEC--------C-CCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEE
T ss_pred ccCCCCCCEEEEEEcCCC--CEEEEECCCEEEEeeccccceeE-EEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEE
Confidence 456788899999999864 57788999999999987643221 12233457888999999999864
Q ss_pred -----------eecccCCEEEEEEeeCCC-EEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEE
Q 048118 77 -----------FVGHTKDVLSVAFSIDNR-QIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVS 144 (303)
Q Consensus 77 -----------~~~h~~~i~~i~~~~~~~-~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 144 (303)
+.+|...|.+++|++++. ++++++.|+.|++||+.............+...+.+++|+|+. ...+++
T Consensus 166 wd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~-~~~la~ 244 (357)
T 4g56_B 166 WDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEK-DDTFAC 244 (357)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTS-TTEEEE
T ss_pred EECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcc-cceEEE
Confidence 347999999999999875 7899999999999998654322222233456779999999975 357889
Q ss_pred EeCCCcEEEEECCCceeEEEEcCCCCCeeEEEECCCC-CEEEEEeCCCeEEEEeCCCCceEEEecCCCeEEEEEEcC-CC
Q 048118 145 ASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDG-SLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSP-NR 222 (303)
Q Consensus 145 ~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~-~~ 222 (303)
|+.|+.|++||++++++...+.+|...|++++|+|++ ++|++|+.|++|++||+++++.+..+.+...|++++|+| ++
T Consensus 245 g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~ 324 (357)
T 4g56_B 245 GDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDH 324 (357)
T ss_dssp EESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSST
T ss_pred eecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCC
Confidence 9999999999999999999999999999999999987 578999999999999999999888887788999999998 56
Q ss_pred eEE-EEEcCCcEEEEeCCCC
Q 048118 223 YWL-CAATEQSIKIWDLESK 241 (303)
Q Consensus 223 ~~l-~~~~~~~i~iwd~~~~ 241 (303)
.+| +++.|+.|++||+...
T Consensus 325 ~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 325 SKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp TEEEEEETTSCEEEEECC--
T ss_pred CEEEEEcCCCeEEEEECCCC
Confidence 555 5667999999998653
No 54
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.6e-34 Score=254.32 Aligned_cols=267 Identities=12% Similarity=0.097 Sum_probs=191.4
Q ss_pred cccccccceeeeecCCC-----CCcEEEEecCCCcEEEEEcccCccc------cceeeeeecCCCcceEEEEeCCCCc--
Q 048118 10 TMRAHTDMVTAIATPID-----NSDMIVTASRDKSIIVWHLTKEEKT------YGVARRRLTGHSHFVQDVVLSSDGQ-- 76 (303)
Q Consensus 10 ~~~~h~~~v~~v~~~~~-----~~~~~~t~s~d~~i~iw~~~~~~~~------~~~~~~~~~~~~~~i~~~~~~~~~~-- 76 (303)
.+.+|.+.|+.++|+|. ..++||+++.|++|++|++...... ...+...+.+|...+.++.+++++.
T Consensus 202 ~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~la 281 (524)
T 2j04_B 202 TIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTTVV 281 (524)
T ss_dssp EEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSSEEE
T ss_pred EEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCCeEE
Confidence 35677889999999986 2469999999999999999754321 1112235667888888888876431
Q ss_pred ----------------------eecccCCEEEE--EEeeCC-CEEEEEeCCCcEEEEecCCceee-eeecCCCCccceEE
Q 048118 77 ----------------------FVGHTKDVLSV--AFSIDN-RQIVSASRDRTIKLWNTLGECKY-TIQEGDAHTEWVSC 130 (303)
Q Consensus 77 ----------------------~~~h~~~i~~i--~~~~~~-~~l~t~~~d~~i~vw~~~~~~~~-~~~~~~~~~~~i~~ 130 (303)
+.+|.+.|.++ .|++++ .+|+|++.|++|+|||+...... .... ......+.+
T Consensus 282 sgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~-~~~~~~v~~ 360 (524)
T 2j04_B 282 CGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVS-RFRGSNLVP 360 (524)
T ss_dssp EEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEE-ECSCCSCCC
T ss_pred EEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccccc-ccccCcccc
Confidence 35799999999 567787 89999999999999998543211 1111 111123778
Q ss_pred EEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEe---
Q 048118 131 VRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL--- 207 (303)
Q Consensus 131 ~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~--- 207 (303)
++|+|++ ..+++++.|+.|++||++++.+...+.+|.+.|++++|+|+++.|++|+.|++|++||+..+ .+...
T Consensus 361 v~fsp~~--~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~-~~~~~~~~ 437 (524)
T 2j04_B 361 VVYCPQI--YSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARR-LLHGIKNS 437 (524)
T ss_dssp EEEETTT--TEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS-TTTCC---
T ss_pred eEeCCCc--CeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh-hccccccC
Confidence 9999975 46899999999999999998887888899999999999999999999999999999998654 22211
Q ss_pred ---cCCCeEEEEEEcCCCeEEEEEcCCcEEEEeCC-CCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCC
Q 048118 208 ---DAGAVIHALCFSPNRYWLCAATEQSIKIWDLE-SKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDG 283 (303)
Q Consensus 208 ---~~~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~ 283 (303)
.....+.+++|+|++..+.... ...+|+.. ++.. ...+.++...+.+++|+|++
T Consensus 438 ~~~~~~~~v~~v~~sp~g~~~~~~~--~~~~~~~~~~g~~--------------------~~~l~gh~~~V~~Vafsp~~ 495 (524)
T 2j04_B 438 SATQKSLRLWKWDYSIKDDKYRIDS--SYEVYPLTVNDVS--------------------KAKIDAHGINITCTKWNETS 495 (524)
T ss_dssp ---CCCCEEEECBCCSSSCEEEECC--CCCCCC---------------------------------CCCSCCCEEECCST
T ss_pred ccceeeeEEEEeccCCCCCeEEccC--CceecccccCCcc--------------------eeeecCCCceEEEEECCCCC
Confidence 1122577899999987543322 22222221 1111 11234455667889999996
Q ss_pred C---EEEEeecCCeEEEEeccc
Q 048118 284 S---TLFSGYTDGVIRVWGIGR 302 (303)
Q Consensus 284 ~---~l~~gs~Dg~v~~w~~~~ 302 (303)
. .+|+|+.||+|+||++..
T Consensus 496 ~~~~~lAsg~~~g~vrlw~l~~ 517 (524)
T 2j04_B 496 AGGKCYAFSNSAGLLTLEYLSL 517 (524)
T ss_dssp TTTTEEEEECTTSEEEEEECSC
T ss_pred CccHHHHhhccCceEEEEEccc
Confidence 4 999999999999999864
No 55
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=7.2e-33 Score=259.32 Aligned_cols=250 Identities=25% Similarity=0.415 Sum_probs=206.4
Q ss_pred eeecccccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCE
Q 048118 5 LVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDV 84 (303)
Q Consensus 5 ~~~~~~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i 84 (303)
+.+...+.+|.+.|++++|+|++ .+|++|+.||.|++|+...... .. .+.+|.+.|
T Consensus 3 l~~~~~~~~h~~~v~~i~~sp~~-~~la~~~~~g~v~iwd~~~~~~-----~~------------------~~~~~~~~v 58 (814)
T 3mkq_A 3 LDIKKTFSNRSDRVKGIDFHPTE-PWVLTTLYSGRVEIWNYETQVE-----VR------------------SIQVTETPV 58 (814)
T ss_dssp CCCEEEEEEECSCEEEEEECSSS-SEEEEEETTSEEEEEETTTTEE-----EE------------------EEECCSSCE
T ss_pred cccceeeecCCCceEEEEECCCC-CEEEEEeCCCEEEEEECCCCce-----EE------------------EEecCCCcE
Confidence 45667799999999999999975 6899999999999999864321 11 245688999
Q ss_pred EEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCc-eeEE
Q 048118 85 LSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNC-KLRA 163 (303)
Q Consensus 85 ~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~-~~~~ 163 (303)
.+++|+|++.+|++++.|+.|++|+........ ....|...|.+++|+|++ ..+++++.||.|++||+.++ ....
T Consensus 59 ~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~--~~~~~~~~v~~~~~s~~~--~~l~~~~~dg~i~vw~~~~~~~~~~ 134 (814)
T 3mkq_A 59 RAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVV--DFEAHPDYIRSIAVHPTK--PYVLSGSDDLTVKLWNWENNWALEQ 134 (814)
T ss_dssp EEEEEEGGGTEEEEEETTSEEEEEETTTCCEEE--EEECCSSCEEEEEECSSS--SEEEEEETTSEEEEEEGGGTSEEEE
T ss_pred EEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEE--EEecCCCCEEEEEEeCCC--CEEEEEcCCCEEEEEECCCCceEEE
Confidence 999999999999999999999999986543222 224577889999999986 57999999999999999876 6777
Q ss_pred EEcCCCCCeeEEEECC-CCCEEEEEeCCCeEEEEeCCCCceEEEecC--CCeEEEEEEcC--CCeEEE-EEcCCcEEEEe
Q 048118 164 TLAGHTGYVNTVAVSP-DGSLCASGGKDGVILLWDLAEGKRLYSLDA--GAVIHALCFSP--NRYWLC-AATEQSIKIWD 237 (303)
Q Consensus 164 ~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~--~~~v~~~~~s~--~~~~l~-~~~~~~i~iwd 237 (303)
.+.+|...|.+++|+| +++.|++++.||+|++||+.+++....+.. ...+..++|+| ++.+++ ++.++.|++||
T Consensus 135 ~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d 214 (814)
T 3mkq_A 135 TFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWD 214 (814)
T ss_dssp EEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEE
T ss_pred EEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 8889999999999999 888999999999999999988776665533 36788999998 776554 55689999999
Q ss_pred CCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEeccc
Q 048118 238 LESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIGR 302 (303)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~~ 302 (303)
+++++.+..+. .+...+.+++|+|++++|++|+.||.|++||+..
T Consensus 215 ~~~~~~~~~~~--------------------~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~ 259 (814)
T 3mkq_A 215 YQTKSCVATLE--------------------GHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSST 259 (814)
T ss_dssp TTTTEEEEEEE--------------------CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred CCCCcEEEEEc--------------------CCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 98877654432 2334567899999999999999999999999864
No 56
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.7e-34 Score=247.88 Aligned_cols=281 Identities=16% Similarity=0.260 Sum_probs=205.0
Q ss_pred eecccccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEE
Q 048118 6 VLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVL 85 (303)
Q Consensus 6 ~~~~~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~ 85 (303)
..+..+.+|...|++++|+|++..+|++++.|++|++||+.......... ... ....+.+|...|.
T Consensus 104 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-~~~-------------~~~~~~~~~~~v~ 169 (416)
T 2pm9_A 104 NSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNY-TPL-------------TPGQSMSSVDEVI 169 (416)
T ss_dssp CEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTC-CCB-------------CCCCSCCSSCCCC
T ss_pred cchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccc-ccc-------------ccccccCCCCCee
Confidence 35567889999999999999866899999999999999997543110000 000 0012356888999
Q ss_pred EEEEeeC-CCEEEEEeCCCcEEEEecCCceeeeeecCC----CCccceEEEEEcCCCCCCEEEEEeCCC---cEEEEECC
Q 048118 86 SVAFSID-NRQIVSASRDRTIKLWNTLGECKYTIQEGD----AHTEWVSCVRFSPNTLQPTIVSASWDR---TVKVWNLS 157 (303)
Q Consensus 86 ~i~~~~~-~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~dg---~i~iwd~~ 157 (303)
+++|+|+ +.++++++.|+.|++||+............ .|...+.+++|+|++ ...+++++.|+ .|++||++
T Consensus 170 ~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~d~~~~~i~~~d~~ 248 (416)
T 2pm9_A 170 SLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKN-STRVATATGSDNDPSILIWDLR 248 (416)
T ss_dssp EEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSC-TTEEEEEECCSSSCCCCEEETT
T ss_pred EEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCC-CCEEEEEECCCCCceEEEEeCC
Confidence 9999999 789999999999999998654332222111 126789999999985 34789999998 99999998
Q ss_pred Cc-eeEEEEc-CCCCCeeEEEECC-CCCEEEEEeCCCeEEEEeCCCCceEEEec-CCCeEEEEEEcCCC-eEEE-EEcCC
Q 048118 158 NC-KLRATLA-GHTGYVNTVAVSP-DGSLCASGGKDGVILLWDLAEGKRLYSLD-AGAVIHALCFSPNR-YWLC-AATEQ 231 (303)
Q Consensus 158 ~~-~~~~~~~-~~~~~i~~~~~~~-~~~~l~~~~~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~-~~l~-~~~~~ 231 (303)
+. +....+. +|...|++++|+| ++++|++++.|++|++||+++++.+..+. ....+.+++|+|++ .+++ ++.|+
T Consensus 249 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~ 328 (416)
T 2pm9_A 249 NANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDN 328 (416)
T ss_dssp STTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSS
T ss_pred CCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCC
Confidence 75 5666777 8999999999999 89999999999999999999999888875 35789999999987 5554 55689
Q ss_pred cEEEEeCCCCceeeeeee-c---------cccccc----c--ccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeE
Q 048118 232 SIKIWDLESKSIVEDLKV-D---------LKTEAE----K--SEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVI 295 (303)
Q Consensus 232 ~i~iwd~~~~~~~~~~~~-~---------~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v 295 (303)
.|++||+++.+....... . ...... . ...... .....+...+..++|+|+|++|++|+.||.|
T Consensus 329 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v 407 (416)
T 2pm9_A 329 KIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHL-QAPTWYGEPSPAAHWAFGGKLVQITPDGKGV 407 (416)
T ss_dssp EEEEEESCCCCCSSCC----------------------CCSCCCSSCC-CCCSTTCCCSCCCEEETTTEEECBCTTSSCB
T ss_pred cEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccc-cCCccccCCccceEEeeCCeEEEEeCCCCeE
Confidence 999999987654322110 0 000000 0 000000 0011123345678999999999999999999
Q ss_pred EEEeccc
Q 048118 296 RVWGIGR 302 (303)
Q Consensus 296 ~~w~~~~ 302 (303)
++|++..
T Consensus 408 ~~w~~~~ 414 (416)
T 2pm9_A 408 SITNPKI 414 (416)
T ss_dssp CCBCCCC
T ss_pred EEEEecc
Confidence 9999853
No 57
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=4.3e-33 Score=241.68 Aligned_cols=238 Identities=18% Similarity=0.300 Sum_probs=189.1
Q ss_pred cceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEeeCCCE
Q 048118 16 DMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSIDNRQ 95 (303)
Q Consensus 16 ~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~~~~~ 95 (303)
+.++.++|+|++ ++|++++.|+.+++|+........ .+..| ..+....|++++.+
T Consensus 57 ~~~~~~~~s~~g-~~l~~~~~d~~v~i~d~~~~~~~~-----------------------~~~~~-~~~~~~~~~~~~~~ 111 (420)
T 3vl1_A 57 DAGKGNTFEKVG-SHLYKARLDGHDFLFNTIIRDGSK-----------------------MLKRA-DYTAVDTAKLQMRR 111 (420)
T ss_dssp BCCTTCEEEEEE-TTEEEEEETTEEEEEECCSEETTT-----------------------TSCSC-CEEEEEEECSSSCE
T ss_pred ccccceeeeecC-CeEEEEEcCCcEEEEEecccceee-----------------------EEecC-CceEEEEEecCCCE
Confidence 345688999875 579999999999999986432211 11122 23344578899999
Q ss_pred EEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEEEcCCCCCeeEE
Q 048118 96 IVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTV 175 (303)
Q Consensus 96 l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~ 175 (303)
|++++.|+.|++||...... ......|...|.+++|+|++ ..+++++.|+.|++||+.+++....+.+|...|.++
T Consensus 112 l~~~~~dg~i~iwd~~~~~~--~~~~~~h~~~v~~~~~~~~~--~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~ 187 (420)
T 3vl1_A 112 FILGTTEGDIKVLDSNFNLQ--REIDQAHVSEITKLKFFPSG--EALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDI 187 (420)
T ss_dssp EEEEETTSCEEEECTTSCEE--EEETTSSSSCEEEEEECTTS--SEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEE
T ss_pred EEEEECCCCEEEEeCCCcce--eeecccccCccEEEEECCCC--CEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEE
Confidence 99999999999999865433 23335688899999999985 489999999999999999998888999999999999
Q ss_pred EECCCCCEEEEEeCCCeEEEEeCCCCceEEEecC----CCeEEE---------------------EEEcCCCeEEE-EEc
Q 048118 176 AVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDA----GAVIHA---------------------LCFSPNRYWLC-AAT 229 (303)
Q Consensus 176 ~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~----~~~v~~---------------------~~~s~~~~~l~-~~~ 229 (303)
+|+|++++|++++.|++|++||+++++.+..+.. ...+.+ ++|+|++.+++ ++.
T Consensus 188 ~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 267 (420)
T 3vl1_A 188 AIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHV 267 (420)
T ss_dssp EEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEET
T ss_pred EEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcC
Confidence 9999999999999999999999999988877642 234444 44578886665 456
Q ss_pred CCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCC-EEEEeecCCeEEEEecc
Q 048118 230 EQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGS-TLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 230 ~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~-~l~~gs~Dg~v~~w~~~ 301 (303)
++.|++||+++++.+..+. ..+...+.+++|+|++. +|++|+.||.|++||+.
T Consensus 268 dg~i~i~d~~~~~~~~~~~-------------------~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~ 321 (420)
T 3vl1_A 268 SGVITVHNVFSKEQTIQLP-------------------SKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLR 321 (420)
T ss_dssp TSCEEEEETTTCCEEEEEC-------------------CTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETT
T ss_pred CCeEEEEECCCCceeEEcc-------------------cccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcC
Confidence 8999999998876554332 12334578899999998 99999999999999985
No 58
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1e-32 Score=238.41 Aligned_cols=246 Identities=21% Similarity=0.265 Sum_probs=192.5
Q ss_pred eeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEee-CCCEE
Q 048118 18 VTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSI-DNRQI 96 (303)
Q Consensus 18 v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~-~~~~l 96 (303)
...++++|....++++++.||.|++|++.+..... ..-..+.+|.+.|.+++|+| ++.+|
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~-------------------~~~~~~~~h~~~V~~~~~~p~~~~~l 97 (402)
T 2aq5_A 37 SGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVD-------------------KNVPLVCGHTAPVLDIAWCPHNDNVI 97 (402)
T ss_dssp SCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECC-------------------TTCCCBCCCSSCEEEEEECTTCTTEE
T ss_pred CCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCC-------------------CCCceEecCCCCEEEEEeCCCCCCEE
Confidence 44567777665666678999999999986432110 00123567999999999999 89999
Q ss_pred EEEeCCCcEEEEecCCcee-----eeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEEE--cCCC
Q 048118 97 VSASRDRTIKLWNTLGECK-----YTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATL--AGHT 169 (303)
Q Consensus 97 ~t~~~d~~i~vw~~~~~~~-----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~--~~~~ 169 (303)
++++.|+.|++|++..... ........|...|.+++|+|++ ...+++++.|+.|++||+.+++....+ ..|.
T Consensus 98 ~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 176 (402)
T 2aq5_A 98 ASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTA-QNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHP 176 (402)
T ss_dssp EEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSB-TTEEEEEETTSCEEEEETTTTEEEEEECTTTCC
T ss_pred EEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCC-CCEEEEEcCCCEEEEEECCCCCccEEEecCCCC
Confidence 9999999999999865311 1122224678889999999985 348999999999999999999998888 7899
Q ss_pred CCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEe-cC-C-CeEEEEEEcCCCeEEEEE----cCCcEEEEeCCCCc
Q 048118 170 GYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL-DA-G-AVIHALCFSPNRYWLCAA----TEQSIKIWDLESKS 242 (303)
Q Consensus 170 ~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~-~~-~-~~v~~~~~s~~~~~l~~~----~~~~i~iwd~~~~~ 242 (303)
..|++++|+|++++|++++.|+.|++||+++++.+..+ .. . ..+..++|+|++.+++++ .++.|++||+++.+
T Consensus 177 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 177 DTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLE 256 (402)
T ss_dssp SCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCS
T ss_pred CceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCcccc
Confidence 99999999999999999999999999999999888776 32 2 347889999999988876 68999999998754
Q ss_pred ee-eeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEE-EeecCCeEEEEeccc
Q 048118 243 IV-EDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLF-SGYTDGVIRVWGIGR 302 (303)
Q Consensus 243 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~-~gs~Dg~v~~w~~~~ 302 (303)
.. ..... .+...+..++|+|++.+|+ +|+.||.|++|++..
T Consensus 257 ~~~~~~~~-------------------~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~ 299 (402)
T 2aq5_A 257 EPLSLQEL-------------------DTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITS 299 (402)
T ss_dssp SCSEEEEC-------------------CCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECS
T ss_pred CCceEEec-------------------cCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecC
Confidence 31 11110 1122356789999999886 566899999999853
No 59
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-32 Score=235.66 Aligned_cols=275 Identities=19% Similarity=0.233 Sum_probs=208.3
Q ss_pred cccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCcee---------------
Q 048118 14 HTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFV--------------- 78 (303)
Q Consensus 14 h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--------------- 78 (303)
|.+.|++++|+|++ ++|++|+.|+.|++|+.. +.....+..|...|.++.++|++.+.
T Consensus 107 ~~~~v~~~~~s~~~-~~l~~~~~dg~i~i~~~~------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 179 (425)
T 1r5m_A 107 TTNQVTCLAWSHDG-NSIVTGVENGELRLWNKT------GALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVI 179 (425)
T ss_dssp -CBCEEEEEECTTS-SEEEEEETTSCEEEEETT------SCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETT
T ss_pred CCCceEEEEEcCCC-CEEEEEeCCCeEEEEeCC------CCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECC
Confidence 67899999999864 699999999999999832 23345567788899999998876421
Q ss_pred ---------cccCC---------------EEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEc
Q 048118 79 ---------GHTKD---------------VLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFS 134 (303)
Q Consensus 79 ---------~h~~~---------------i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~ 134 (303)
.|... +.+++|++++ .+++++.|+.|++||....... .....|...|.+++|+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~--~~~~~~~~~i~~~~~~ 256 (425)
T 1r5m_A 180 SGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPT--GKLIGHHGPISVLEFN 256 (425)
T ss_dssp TTEEEEEECCC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCS--EEECCCSSCEEEEEEE
T ss_pred CCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCcee--eeeccCCCceEEEEEC
Confidence 23333 7888999875 5888999999999998654222 2223577889999999
Q ss_pred CCCCCCEEEEEeCCCcEEEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEecC-CCeE
Q 048118 135 PNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDA-GAVI 213 (303)
Q Consensus 135 ~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~-~~~v 213 (303)
|++ ..+++++.|+.|++||+.+++....+..|...|.+++|+|++ ++++++.|+.|++||+++++.+..+.. ...+
T Consensus 257 ~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i 333 (425)
T 1r5m_A 257 DTN--KLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPI 333 (425)
T ss_dssp TTT--TEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCE
T ss_pred CCC--CEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccE
Confidence 986 489999999999999999988888899999999999999999 999999999999999999988877754 6789
Q ss_pred EEEEEcCCCeEEEE-EcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccce--eEEEEEEcCCCCEEEEee
Q 048118 214 HALCFSPNRYWLCA-ATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNI--YCTSLNWSVDGSTLFSGY 290 (303)
Q Consensus 214 ~~~~~s~~~~~l~~-~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~sp~~~~l~~gs 290 (303)
.+++|+|++.++++ +.++.|++||+++++........................+..+.. .+.+++|+|++++|++|+
T Consensus 334 ~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 413 (425)
T 1r5m_A 334 FAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAY 413 (425)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEe
Confidence 99999999876654 568999999997665211000000000000000012233444433 788999999999999999
Q ss_pred cCCeEEEEecc
Q 048118 291 TDGVIRVWGIG 301 (303)
Q Consensus 291 ~Dg~v~~w~~~ 301 (303)
.||.|++|++.
T Consensus 414 ~dg~i~iw~~~ 424 (425)
T 1r5m_A 414 SLQEGSVVAIP 424 (425)
T ss_dssp SSSCCEEEECC
T ss_pred cCceEEEEeec
Confidence 99999999974
No 60
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=2.4e-32 Score=266.50 Aligned_cols=266 Identities=25% Similarity=0.431 Sum_probs=212.7
Q ss_pred cccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEE
Q 048118 10 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAF 89 (303)
Q Consensus 10 ~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~ 89 (303)
.+.+|.+.|++++|+|++ .++++|+.|++|++|+....... . .+.+|.+.|.+++|
T Consensus 610 ~~~~h~~~v~~~~~s~~~-~~l~s~~~d~~i~vw~~~~~~~~-----~------------------~~~~h~~~v~~~~~ 665 (1249)
T 3sfz_A 610 VVRPHTDAVYHACFSQDG-QRIASCGADKTLQVFKAETGEKL-----L------------------DIKAHEDEVLCCAF 665 (1249)
T ss_dssp EECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEE-----E------------------EECCCSSCEEEEEE
T ss_pred EEecccccEEEEEECCCC-CEEEEEeCCCeEEEEECCCCCEE-----E------------------EeccCCCCEEEEEE
Confidence 467899999999999875 68999999999999998654321 1 24578999999999
Q ss_pred eeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEEEcCCC
Q 048118 90 SIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHT 169 (303)
Q Consensus 90 ~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~ 169 (303)
+|++.++++++.|+.|++||....... .....|...|.+++|+|++....+++++.|+.|++||+.++++...+.+|.
T Consensus 666 s~~~~~l~s~~~d~~v~vwd~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~ 743 (1249)
T 3sfz_A 666 SSDDSYIATCSADKKVKIWDSATGKLV--HTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHT 743 (1249)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTCCEE--EEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCS
T ss_pred ecCCCEEEEEeCCCeEEEEECCCCceE--EEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCC
Confidence 999999999999999999998654322 222367888999999997656689999999999999999999999999999
Q ss_pred CCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEecC--------------CCeEEEEEEcCCCeEEEEEcCCcEEE
Q 048118 170 GYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDA--------------GAVIHALCFSPNRYWLCAATEQSIKI 235 (303)
Q Consensus 170 ~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~--------------~~~v~~~~~s~~~~~l~~~~~~~i~i 235 (303)
+.|++++|+|++++|++++.||+|++||+++++....+.. ...+.+++|+|++..++++.++.+.+
T Consensus 744 ~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~ 823 (1249)
T 3sfz_A 744 NSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLL 823 (1249)
T ss_dssp SCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEE
T ss_pred CCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEE
Confidence 9999999999999999999999999999998877655432 22577889999998888888899999
Q ss_pred EeCCCCceeeeeeeccc---------ccc--------------ccccCccceeeccccceeEEEEEEcCCCCEEEEeecC
Q 048118 236 WDLESKSIVEDLKVDLK---------TEA--------------EKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTD 292 (303)
Q Consensus 236 wd~~~~~~~~~~~~~~~---------~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~D 292 (303)
||+.++..+..+..... +.. ...........+..+...+.+++|+|++.+|++++.|
T Consensus 824 ~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~d 903 (1249)
T 3sfz_A 824 FDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDD 903 (1249)
T ss_dssp EETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCC
Confidence 99988776655431100 000 0000111223345667778999999999999999999
Q ss_pred CeEEEEecc
Q 048118 293 GVIRVWGIG 301 (303)
Q Consensus 293 g~v~~w~~~ 301 (303)
|.|++|++.
T Consensus 904 g~v~vw~~~ 912 (1249)
T 3sfz_A 904 QTIRVWETK 912 (1249)
T ss_dssp SCEEEEEHH
T ss_pred CeEEEEEcc
Confidence 999999964
No 61
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.2e-32 Score=238.03 Aligned_cols=256 Identities=19% Similarity=0.264 Sum_probs=197.9
Q ss_pred cccccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEE
Q 048118 8 KGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSV 87 (303)
Q Consensus 8 ~~~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i 87 (303)
...+.+|.+.|++++|+|.++++|++|+.|++|++|++......... . .+...+.+|...|.++
T Consensus 74 ~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~--------~--------~~~~~~~~h~~~v~~~ 137 (402)
T 2aq5_A 74 VPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPL--------R--------EPVITLEGHTKRVGIV 137 (402)
T ss_dssp CCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCB--------C--------SCSEEEECCSSCEEEE
T ss_pred CceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCcccc--------C--------CceEEecCCCCeEEEE
Confidence 34578999999999999955689999999999999998754211000 0 0112456799999999
Q ss_pred EEeeCC-CEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEEE-
Q 048118 88 AFSIDN-RQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATL- 165 (303)
Q Consensus 88 ~~~~~~-~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~- 165 (303)
+|+|++ .+|++++.|+.|++||+.............|...|.+++|+|++ ..+++++.|+.|++||+++++....+
T Consensus 138 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~iwd~~~~~~~~~~~ 215 (402)
T 2aq5_A 138 AWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDG--ALICTSCRDKRVRVIEPRKGTVVAEKD 215 (402)
T ss_dssp EECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTS--SCEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred EECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCC--CEEEEEecCCcEEEEeCCCCceeeeec
Confidence 999998 69999999999999998654332222114678889999999976 47999999999999999999888888
Q ss_pred cCCCCC-eeEEEECCCCCEEEEE---eCCCeEEEEeCCCCce---EEEecCCCeEEEEEEcCCCeEEE-EE-cCCcEEEE
Q 048118 166 AGHTGY-VNTVAVSPDGSLCASG---GKDGVILLWDLAEGKR---LYSLDAGAVIHALCFSPNRYWLC-AA-TEQSIKIW 236 (303)
Q Consensus 166 ~~~~~~-i~~~~~~~~~~~l~~~---~~d~~v~iwd~~~~~~---~~~~~~~~~v~~~~~s~~~~~l~-~~-~~~~i~iw 236 (303)
..|.+. +..+.|+|++++|++| +.|+.|++||+++++. ...+.....+.+++|+|++.+++ ++ .|+.|++|
T Consensus 216 ~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~ 295 (402)
T 2aq5_A 216 RPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYF 295 (402)
T ss_dssp CSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEE
T ss_pred cCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEE
Confidence 678765 8999999999999999 7899999999987654 33345567789999999987664 44 58999999
Q ss_pred eCCCCce-eeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEecc
Q 048118 237 DLESKSI-VEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 237 d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~ 301 (303)
|+++++. +..+... . +...+.+++|+|++.++++ .|+.+++|++.
T Consensus 296 d~~~~~~~~~~l~~~-----------------~-~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~ 341 (402)
T 2aq5_A 296 EITSEAPFLHYLSMF-----------------S-SKESQRGMGYMPKRGLEVN--KCEIARFYKLH 341 (402)
T ss_dssp EECSSTTCEEEEEEE-----------------C-CSSCCSEEEECCGGGSCGG--GTEEEEEEEEE
T ss_pred EecCCCcceEeeccc-----------------c-cCCcccceEEeccccccee--cceeEEEEEcC
Confidence 9988763 2222210 0 1234567999999988764 56799999975
No 62
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.9e-32 Score=230.95 Aligned_cols=205 Identities=24% Similarity=0.405 Sum_probs=167.7
Q ss_pred ceecccC-CEEEEEEeeCCCEEEEEeCCCcEEEEecCCceee-eeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEE
Q 048118 76 QFVGHTK-DVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKY-TIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKV 153 (303)
Q Consensus 76 ~~~~h~~-~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~i 153 (303)
.+.+|.+ .|++++|+|++.+|++|+.|+.|+||+....... .......|...|.+++|+|++ ..+++++.|+.+++
T Consensus 10 ~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g--~~l~s~s~D~~v~i 87 (345)
T 3fm0_A 10 RVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCG--NYLASASFDATTCI 87 (345)
T ss_dssp EECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTS--SEEEEEETTSCEEE
T ss_pred eecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCC--CEEEEEECCCcEEE
Confidence 3557877 8999999999999999999999999998654321 122235688899999999986 58999999999999
Q ss_pred EECCCc--eeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCce---EEEec-CCCeEEEEEEcCCCeEEE-
Q 048118 154 WNLSNC--KLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKR---LYSLD-AGAVIHALCFSPNRYWLC- 226 (303)
Q Consensus 154 wd~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~---~~~~~-~~~~v~~~~~s~~~~~l~- 226 (303)
||+..+ ++...+.+|...|.+++|+|++++|++++.|++|++||++++.. +..+. ....|.+++|+|++.+++
T Consensus 88 w~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s 167 (345)
T 3fm0_A 88 WKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLAS 167 (345)
T ss_dssp EEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEE
T ss_pred EEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEE
Confidence 998765 45678899999999999999999999999999999999987643 33333 456899999999986554
Q ss_pred EEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEec
Q 048118 227 AATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 300 (303)
Q Consensus 227 ~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~ 300 (303)
++.|+.|++||.+.++.... ..+.+|...+.+++|+|++.+|++|+.||+|++|++
T Consensus 168 ~s~d~~i~~w~~~~~~~~~~------------------~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 168 ASYDDTVKLYREEEDDWVCC------------------ATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQ 223 (345)
T ss_dssp EETTSCEEEEEEETTEEEEE------------------EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred EeCCCcEEEEEecCCCEEEE------------------EEecCCCCceEEEEECCCCCEEEEEeCCCeEEEecc
Confidence 55699999999876543211 123455667889999999999999999999999985
No 63
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=9.3e-32 Score=225.39 Aligned_cols=203 Identities=26% Similarity=0.449 Sum_probs=169.3
Q ss_pred ceecccCCEEEEEEeeCC-CEEEEEeCCCcEEEEecCCce---eeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcE
Q 048118 76 QFVGHTKDVLSVAFSIDN-RQIVSASRDRTIKLWNTLGEC---KYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTV 151 (303)
Q Consensus 76 ~~~~h~~~i~~i~~~~~~-~~l~t~~~d~~i~vw~~~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i 151 (303)
.+.+|.+.|.+++|+|++ .+|++|+.|+.|++|++.... .........|...|.+++|+|++ ..+++++.|+.|
T Consensus 12 ~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg--~~l~s~s~D~~v 89 (319)
T 3frx_A 12 TLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADG--AYALSASWDKTL 89 (319)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTS--SEEEEEETTSEE
T ss_pred EEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCC--CEEEEEeCCCEE
Confidence 567899999999999965 799999999999999974321 11233345788899999999986 589999999999
Q ss_pred EEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEe-cCCCeEEEEEEcCCC-------e
Q 048118 152 KVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL-DAGAVIHALCFSPNR-------Y 223 (303)
Q Consensus 152 ~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~-~~~~~v~~~~~s~~~-------~ 223 (303)
++||+.+++....+.+|...|.+++|+|++.+|++++.|++|++||++.. .+..+ .....+.+++|+|.. .
T Consensus 90 ~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~-~~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 168 (319)
T 3frx_A 90 RLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ-CLATLLGHNDWVSQVRVVPNEKADDDSVT 168 (319)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC-EEEEECCCSSCEEEEEECCC------CCE
T ss_pred EEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-eEEEEeccCCcEEEEEEccCCCCCCCccE
Confidence 99999999999999999999999999999999999999999999999754 44444 456789999999853 3
Q ss_pred EEEEEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEecc
Q 048118 224 WLCAATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 224 ~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~ 301 (303)
+++++.|+.|++||+++.+.... +.+|...+.+++|+|++++|++|+.||.|++||+.
T Consensus 169 l~s~~~d~~i~~wd~~~~~~~~~--------------------~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~ 226 (319)
T 3frx_A 169 IISAGNDKMVKAWNLNQFQIEAD--------------------FIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLA 226 (319)
T ss_dssp EEEEETTSCEEEEETTTTEEEEE--------------------ECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETT
T ss_pred EEEEeCCCEEEEEECCcchhhee--------------------ecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 56677899999999987765432 23345567889999999999999999999999985
No 64
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.7e-32 Score=233.16 Aligned_cols=249 Identities=17% Similarity=0.295 Sum_probs=188.6
Q ss_pred eeecccccccccceeeeecCCCC--CcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccC
Q 048118 5 LVLKGTMRAHTDMVTAIATPIDN--SDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTK 82 (303)
Q Consensus 5 ~~~~~~~~~h~~~v~~v~~~~~~--~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~ 82 (303)
+..+..+++|.+.|++++|+|+. +++|++|+.|+.|++|++....... . ..+.+|.+
T Consensus 29 ~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~---~------------------~~~~~h~~ 87 (368)
T 3mmy_A 29 MKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTI---P------------------KAQQMHTG 87 (368)
T ss_dssp TCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEE---E------------------EEEEECSS
T ss_pred cceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCcee---E------------------EEeccccC
Confidence 34555789999999999999975 5899999999999999987522110 0 12457899
Q ss_pred CEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEE--cCCCCCCEEEEEeCCCcEEEEECCCce
Q 048118 83 DVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRF--SPNTLQPTIVSASWDRTVKVWNLSNCK 160 (303)
Q Consensus 83 ~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~dg~i~iwd~~~~~ 160 (303)
.|.+++|+|++.+|++++.|+.|++||+........ ..|...|.+++| +|++ ..+++++.|+.|++||+++++
T Consensus 88 ~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~---~~~~~~v~~~~~~~~~~~--~~l~~~~~dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 88 PVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQI---AQHDAPVKTIHWIKAPNY--SCVMTGSWDKTLKFWDTRSSN 162 (368)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE---EECSSCEEEEEEEECSSC--EEEEEEETTSEEEEECSSCSS
T ss_pred CEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceee---ccccCceEEEEEEeCCCC--CEEEEccCCCcEEEEECCCCc
Confidence 999999999999999999999999999876543332 247788999999 6654 579999999999999998876
Q ss_pred eEEEEcCCC-----------------------------------------CCeeEEEECCCCCE----EEEEeCCCeEEE
Q 048118 161 LRATLAGHT-----------------------------------------GYVNTVAVSPDGSL----CASGGKDGVILL 195 (303)
Q Consensus 161 ~~~~~~~~~-----------------------------------------~~i~~~~~~~~~~~----l~~~~~d~~v~i 195 (303)
....+..+. ..+..+.+.++... +++++.|+.|++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i 242 (368)
T 3mmy_A 163 PMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAI 242 (368)
T ss_dssp CSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEE
T ss_pred EEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEE
Confidence 655554332 22334444433332 899999999999
Q ss_pred EeCCCC---ceEEEecCCC-------------eEEEEEEcCCCeEE-EEEcCCcEEEEeCCCCceeeeeeeccccccccc
Q 048118 196 WDLAEG---KRLYSLDAGA-------------VIHALCFSPNRYWL-CAATEQSIKIWDLESKSIVEDLKVDLKTEAEKS 258 (303)
Q Consensus 196 wd~~~~---~~~~~~~~~~-------------~v~~~~~s~~~~~l-~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 258 (303)
||++.. +.+..+.... .+.+++|+|++.++ +++.||.|++||+++++.+..+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---------- 312 (368)
T 3mmy_A 243 HYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSE---------- 312 (368)
T ss_dssp EESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECC----------
T ss_pred EecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEec----------
Confidence 999876 3344443322 59999999998655 55679999999999887665432
Q ss_pred cCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEe
Q 048118 259 EATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWG 299 (303)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~ 299 (303)
.+...+.+++|+|++.+|++|+.|+..+.|+
T Consensus 313 ----------~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~ 343 (368)
T 3mmy_A 313 ----------QLDQPISACCFNHNGNIFAYASSYDWSKGHE 343 (368)
T ss_dssp ----------CCSSCEEEEEECTTSSCEEEEECCCSTTCGG
T ss_pred ----------CCCCCceEEEECCCCCeEEEEeccccccccc
Confidence 3344678899999999999999998655544
No 65
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=2.9e-32 Score=229.90 Aligned_cols=251 Identities=14% Similarity=0.134 Sum_probs=193.2
Q ss_pred ccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEe
Q 048118 11 MRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFS 90 (303)
Q Consensus 11 ~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~ 90 (303)
..+|.+.|++++|+|++ .+|++++.|+.|++|++....... .. ..+.+|...|.+++|+
T Consensus 7 ~~~h~~~v~~~~~s~~~-~~l~~~~~d~~v~iw~~~~~~~~~--~~------------------~~~~~~~~~v~~~~~~ 65 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSK-SLLLITSWDGSLTVYKFDIQAKNV--DL------------------LQSLRYKHPLLCCNFI 65 (342)
T ss_dssp SSCCSSCEEEEEEEGGG-TEEEEEETTSEEEEEEEETTTTEE--EE------------------EEEEECSSCEEEEEEE
T ss_pred ccCCCCcEEEEEEcCCC-CEEEEEcCCCeEEEEEeCCCCccc--cc------------------eeeeecCCceEEEEEC
Confidence 45899999999999864 689999999999999987543110 00 0234688999999999
Q ss_pred eCCC-EEEEEeCCCcEEEEec-CCceeeeeecCCC--CccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCC--------
Q 048118 91 IDNR-QIVSASRDRTIKLWNT-LGECKYTIQEGDA--HTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSN-------- 158 (303)
Q Consensus 91 ~~~~-~l~t~~~d~~i~vw~~-~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~-------- 158 (303)
|++. ++++++.|+.|++|++ ....... ... |...|.+++|+| + ..+++++.|+.|++||+++
T Consensus 66 ~~~~~~l~~~~~dg~i~~wd~~~~~~~~~---~~~~~~~~~v~~l~~~~-~--~~l~s~~~d~~i~iwd~~~~~~~~~~~ 139 (342)
T 1yfq_A 66 DNTDLQIYVGTVQGEILKVDLIGSPSFQA---LTNNEANLGICRICKYG-D--DKLIAASWDGLIEVIDPRNYGDGVIAV 139 (342)
T ss_dssp ESSSEEEEEEETTSCEEEECSSSSSSEEE---CBSCCCCSCEEEEEEET-T--TEEEEEETTSEEEEECHHHHTTBCEEE
T ss_pred CCCCcEEEEEcCCCeEEEEEeccCCceEe---ccccCCCCceEEEEeCC-C--CEEEEEcCCCeEEEEcccccccccccc
Confidence 9999 9999999999999998 6653322 234 788899999999 4 5899999999999999876
Q ss_pred -ceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCC-CceE---EEecCCCeEEEEEEcC-CCeEE-EEEcCC
Q 048118 159 -CKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAE-GKRL---YSLDAGAVIHALCFSP-NRYWL-CAATEQ 231 (303)
Q Consensus 159 -~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~-~~~~---~~~~~~~~v~~~~~s~-~~~~l-~~~~~~ 231 (303)
+++...+. |...+.+++|+|++ +++++.|+.|++||+++ +... ........+.+++|+| ++.++ +++.+|
T Consensus 140 ~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg 216 (342)
T 1yfq_A 140 KNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDG 216 (342)
T ss_dssp EESCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTS
T ss_pred cCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCC
Confidence 55555555 78899999999987 89999999999999987 5432 2234567899999999 87555 556789
Q ss_pred cEEEEeCCCC------ceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEeccc
Q 048118 232 SIKIWDLESK------SIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIGR 302 (303)
Q Consensus 232 ~i~iwd~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~~ 302 (303)
.|++|+++.. +....++...... ....+...+.+++|+|++++|++|+.||.|++||+..
T Consensus 217 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~ 282 (342)
T 1yfq_A 217 RVAVEFFDDQGDDYNSSKRFAFRCHRLNL-----------KDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQT 282 (342)
T ss_dssp EEEEEECCTTCCSTTCTTCEEEECCCCCT-----------TCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTT
T ss_pred cEEEEEEcCCCcccccccceeeecccccc-----------cccccceeEEEEEEcCCCCEEEEecCCceEEEEcCcc
Confidence 9999999765 3333222110000 0012234678899999999999999999999999853
No 66
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.6e-31 Score=233.63 Aligned_cols=244 Identities=25% Similarity=0.395 Sum_probs=195.4
Q ss_pred eecccccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEE
Q 048118 6 VLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVL 85 (303)
Q Consensus 6 ~~~~~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~ 85 (303)
..+..+.+|.+.|+++.|+|++ ++++|+.|++|++||+..... .. .+.+|.+.|.
T Consensus 153 ~~~~~~~~h~~~V~~l~~~~~~--~l~s~s~dg~i~vwd~~~~~~-----~~------------------~~~~h~~~v~ 207 (464)
T 3v7d_B 153 KFLLQLSGHDGGVWALKYAHGG--ILVSGSTDRTVRVWDIKKGCC-----TH------------------VFEGHNSTVR 207 (464)
T ss_dssp EEEEEECCCSSCEEEEEECSTT--EEEEEETTSCEEEEETTTTEE-----EE------------------EECCCSSCEE
T ss_pred cEEEEEeCCCcCEEEEEEcCCC--EEEEEeCCCCEEEEECCCCcE-----EE------------------EECCCCCccE
Confidence 3455688999999999998754 899999999999999864321 11 2456889999
Q ss_pred EEEEee--CCCEEEEEeCCCcEEEEecCCceee---------------------eeecCCCCccceEEEEEcCCCCCCEE
Q 048118 86 SVAFSI--DNRQIVSASRDRTIKLWNTLGECKY---------------------TIQEGDAHTEWVSCVRFSPNTLQPTI 142 (303)
Q Consensus 86 ~i~~~~--~~~~l~t~~~d~~i~vw~~~~~~~~---------------------~~~~~~~~~~~i~~~~~~~~~~~~~~ 142 (303)
+++|++ ++.++++++.|+.|++||+...... .......|...+.++..+. ..+
T Consensus 208 ~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~l 283 (464)
T 3v7d_B 208 CLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHG----NIV 283 (464)
T ss_dssp EEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEET----TEE
T ss_pred EEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCC----CEE
Confidence 999984 6789999999999999997543211 0122345666777775432 479
Q ss_pred EEEeCCCcEEEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEec-CCCeEEEEEEcCC
Q 048118 143 VSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLD-AGAVIHALCFSPN 221 (303)
Q Consensus 143 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~s~~ 221 (303)
++++.|+.|++||+.+++....+.+|...|.+++|+|+++++++|+.||.|++||+++++.+..+. +...+.+++|++
T Consensus 284 ~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~- 362 (464)
T 3v7d_B 284 VSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSD- 362 (464)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECS-
T ss_pred EEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEcC-
Confidence 999999999999999999999999999999999999999999999999999999999999988875 457899999984
Q ss_pred CeEEEEEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEecc
Q 048118 222 RYWLCAATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 222 ~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~ 301 (303)
..+++++.|+.|++||+++++...... +...+..++|+|++.+|++|+ ||.|++||+.
T Consensus 363 ~~l~s~s~dg~v~vwd~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~ 420 (464)
T 3v7d_B 363 KFLVSAAADGSIRGWDANDYSRKFSYH---------------------HTNLSAITTFYVSDNILVSGS-ENQFNIYNLR 420 (464)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEE---------------------CTTCCCEEEEEECSSEEEEEE-TTEEEEEETT
T ss_pred CEEEEEeCCCcEEEEECCCCceeeeec---------------------CCCCccEEEEEeCCCEEEEec-CCeEEEEECC
Confidence 567777889999999998765433221 011224477899999999998 9999999974
No 67
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2.9e-31 Score=230.19 Aligned_cols=259 Identities=15% Similarity=0.255 Sum_probs=193.7
Q ss_pred ecccccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEE
Q 048118 7 LKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLS 86 (303)
Q Consensus 7 ~~~~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~ 86 (303)
....+.+|.+.|++++|+|++ ++|++|+.|++|++||+...... ..+.+|.+.|.+
T Consensus 131 ~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~d~~i~iwd~~~~~~~-----------------------~~~~~h~~~v~~ 186 (420)
T 3vl1_A 131 QREIDQAHVSEITKLKFFPSG-EALISSSQDMQLKIWSVKDGSNP-----------------------RTLIGHRATVTD 186 (420)
T ss_dssp EEEETTSSSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCCCC-----------------------EEEECCSSCEEE
T ss_pred eeeecccccCccEEEEECCCC-CEEEEEeCCCeEEEEeCCCCcCc-----------------------eEEcCCCCcEEE
Confidence 344578999999999999875 69999999999999998754321 134578999999
Q ss_pred EEEeeCCCEEEEEeCCCcEEEEecCCcee-eeeecCCCCccceEEEEE---------------------cCCCCCCEEEE
Q 048118 87 VAFSIDNRQIVSASRDRTIKLWNTLGECK-YTIQEGDAHTEWVSCVRF---------------------SPNTLQPTIVS 144 (303)
Q Consensus 87 i~~~~~~~~l~t~~~d~~i~vw~~~~~~~-~~~~~~~~~~~~i~~~~~---------------------~~~~~~~~~~~ 144 (303)
++|+|++.+|++++.|+.|++||+..... ..+.....+...+.++++ +|++ ..+++
T Consensus 187 ~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~--~~l~~ 264 (420)
T 3vl1_A 187 IAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYG--KYVIA 264 (420)
T ss_dssp EEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTT--EEEEE
T ss_pred EEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCC--CEEEE
Confidence 99999999999999999999999865432 222222234445555555 4543 47899
Q ss_pred EeCCCcEEEEECCCceeEEEEc-CCCCCeeEEEECCCCC-EEEEEeCCCeEEEEeCCCCce-EEEec--CCCeEEEEEEc
Q 048118 145 ASWDRTVKVWNLSNCKLRATLA-GHTGYVNTVAVSPDGS-LCASGGKDGVILLWDLAEGKR-LYSLD--AGAVIHALCFS 219 (303)
Q Consensus 145 ~~~dg~i~iwd~~~~~~~~~~~-~~~~~i~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~-~~~~~--~~~~v~~~~~s 219 (303)
++.||.|++||+++++....+. .|...|++++|+|+++ +|++++.||.|++||+++++. +..+. ....+.++.+.
T Consensus 265 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~ 344 (420)
T 3vl1_A 265 GHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFA 344 (420)
T ss_dssp EETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEE
T ss_pred EcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeC
Confidence 9999999999999887666654 5788999999999998 999999999999999998754 44443 56788888776
Q ss_pred CCCeEEEEEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCC---EEEEeecCCeEE
Q 048118 220 PNRYWLCAATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGS---TLFSGYTDGVIR 296 (303)
Q Consensus 220 ~~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~---~l~~gs~Dg~v~ 296 (303)
+++.+++++.|+.|++||+...+....+... .....+..+...+.+++|+|++. .|++.+.+|.+.
T Consensus 345 ~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~-----------~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~ 413 (420)
T 3vl1_A 345 AGALFVSSGFDTSIKLDIISDPESERPAIEF-----------ETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCA 413 (420)
T ss_dssp TTEEEEEETTTEEEEEEEECCTTCCSCEECT-----------TSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEE
T ss_pred CCCEEEEecCCccEEEEeccCCCCCccceec-----------cCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEE
Confidence 4445555667999999998764322211100 00111233444567899999999 788888899999
Q ss_pred EEeccc
Q 048118 297 VWGIGR 302 (303)
Q Consensus 297 ~w~~~~ 302 (303)
+|++.+
T Consensus 414 ~~~~~~ 419 (420)
T 3vl1_A 414 LYNLSN 419 (420)
T ss_dssp EEESCC
T ss_pred EEeccC
Confidence 999853
No 68
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=7.5e-32 Score=223.69 Aligned_cols=209 Identities=20% Similarity=0.326 Sum_probs=165.1
Q ss_pred eecccCCEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEEC
Q 048118 77 FVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNL 156 (303)
Q Consensus 77 ~~~h~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~ 156 (303)
+.+|.+.|.+++|+|+|++|++|+.|+.|+||+..............|...|.+++|+|......+++++.|+.|++||+
T Consensus 5 ~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~ 84 (297)
T 2pm7_B 5 ANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKE 84 (297)
T ss_dssp CCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEB
T ss_pred ccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEc
Confidence 45799999999999999999999999999999986432222233457889999999986422358999999999999999
Q ss_pred CCce--eEEEEcCCCCCeeEEEECCC--CCEEEEEeCCCeEEEEeCCCCce--EEEe-cCCCeEEEEEEcCCC-------
Q 048118 157 SNCK--LRATLAGHTGYVNTVAVSPD--GSLCASGGKDGVILLWDLAEGKR--LYSL-DAGAVIHALCFSPNR------- 222 (303)
Q Consensus 157 ~~~~--~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~v~iwd~~~~~~--~~~~-~~~~~v~~~~~s~~~------- 222 (303)
.+++ ....+.+|...|.+++|+|+ +++|++++.|++|++||++++.. ...+ .+...+.+++|+|+.
T Consensus 85 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~ 164 (297)
T 2pm7_B 85 ENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEH 164 (297)
T ss_dssp SSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC-------
T ss_pred CCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccC
Confidence 8763 45667889999999999997 88999999999999999986532 2222 345689999999962
Q ss_pred -------eEEEEEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCC---CEEEEeecC
Q 048118 223 -------YWLCAATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDG---STLFSGYTD 292 (303)
Q Consensus 223 -------~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~---~~l~~gs~D 292 (303)
.+++++.|+.|++||+++++....+ ...+.+|...+.+++|+|++ .+|++|+.|
T Consensus 165 ~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~----------------~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D 228 (297)
T 2pm7_B 165 NGTKESRKFVTGGADNLVKIWKYNSDAQTYVL----------------ESTLEGHSDWVRDVAWSPTVLLRSYMASVSQD 228 (297)
T ss_dssp -----CCEEEEEETTSCEEEEEEETTTTEEEE----------------EEEECCCSSCEEEEEECCCCSSSEEEEEEETT
T ss_pred CCCCCcceEEEEcCCCcEEEEEEcCCCceEEE----------------EEEecCCCCceEEEEECCCCCCceEEEEEECC
Confidence 4555667999999998765421110 12345566778999999985 799999999
Q ss_pred CeEEEEecc
Q 048118 293 GVIRVWGIG 301 (303)
Q Consensus 293 g~v~~w~~~ 301 (303)
|+|++||+.
T Consensus 229 ~~v~iWd~~ 237 (297)
T 2pm7_B 229 RTCIIWTQD 237 (297)
T ss_dssp SCEEEEEES
T ss_pred CcEEEEEeC
Confidence 999999975
No 69
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=4.4e-31 Score=220.37 Aligned_cols=203 Identities=29% Similarity=0.472 Sum_probs=172.9
Q ss_pred ceecccCCEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEE
Q 048118 76 QFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWN 155 (303)
Q Consensus 76 ~~~~h~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd 155 (303)
.+.+|.+.|.+++|+|++++|++++.|+.|++|+....... .....|...|.+++|+|++ ..+++++.|+.|++||
T Consensus 18 ~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~--~~~~~h~~~v~~~~~~~~~--~~l~s~~~d~~i~vwd 93 (312)
T 4ery_A 18 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE--KTISGHKLGISDVAWSSDS--NLLVSASDDKTLKIWD 93 (312)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE--EEECCCSSCEEEEEECTTS--SEEEEEETTSEEEEEE
T ss_pred EEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccc--hhhccCCCceEEEEEcCCC--CEEEEECCCCEEEEEE
Confidence 35689999999999999999999999999999998543222 2224678889999999986 5899999999999999
Q ss_pred CCCceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEecC-CCeEEEEEEcCCCeEE-EEEcCCcE
Q 048118 156 LSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDA-GAVIHALCFSPNRYWL-CAATEQSI 233 (303)
Q Consensus 156 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~-~~~v~~~~~s~~~~~l-~~~~~~~i 233 (303)
+.+++....+.+|...|.+++|+|++++|++++.|++|++||+++++.+..+.. ...+.+++|+|++.++ +++.|+.|
T Consensus 94 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 173 (312)
T 4ery_A 94 VSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 173 (312)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcE
Confidence 999999999999999999999999999999999999999999999988887754 5689999999998655 45679999
Q ss_pred EEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEecc
Q 048118 234 KIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 234 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~ 301 (303)
++||+++++.+..+.. .+...+..++|+|++++|++|+.||.|++||+.
T Consensus 174 ~~wd~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~ 222 (312)
T 4ery_A 174 RIWDTASGQCLKTLID-------------------DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 222 (312)
T ss_dssp EEEETTTCCEEEEECC-------------------SSCCCEEEEEECTTSSEEEEEETTTEEEEEETT
T ss_pred EEEECCCCceeeEEec-------------------cCCCceEEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 9999998776543321 112335678999999999999999999999985
No 70
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.1e-32 Score=236.18 Aligned_cols=255 Identities=12% Similarity=0.086 Sum_probs=197.8
Q ss_pred ccceeecccccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCce----
Q 048118 2 AEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQF---- 77 (303)
Q Consensus 2 ~~~~~~~~~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---- 77 (303)
.++|.+-+ +.-.+-|.+|+|+|++ .++||+|.|++|+ +.... ..+.+|...+..+.++|++..
T Consensus 4 ~~~~~~~~--~~~~~~v~sv~~SpDG-~~iASas~D~TV~--d~~~~--------~~l~gh~~~v~~V~FsPdg~~~~~~ 70 (588)
T 2j04_A 4 LKDLLVDR--KEFEDWKNNLTWARDG-TLYLTTFPDISIG--QPKYA--------KDINCNSKNLFHVKEFPLEFENKLD 70 (588)
T ss_dssp CBCEEECS--CCCSSSSCCEEECTTS-CEEEECSSSEEEE--EECCC--------SCCSSBGGGTEEEEEECCCCCCTTT
T ss_pred hHhhcccH--hHhhccEEEEEECCCC-CEEEEEcCCceee--ccccc--------ceecCCCccEEEEEECCCCCcceEE
Confidence 34555543 2333679999999975 6999999999999 53211 223578889999999987632
Q ss_pred ----------e-cccCCEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCc-----cceEEEEEcCCCCCCE
Q 048118 78 ----------V-GHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHT-----EWVSCVRFSPNTLQPT 141 (303)
Q Consensus 78 ----------~-~h~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~~~ 141 (303)
. .|...|.+++|+|+|.+||+++.|+.|++|+..+ . ....+ |. ..+.+++|+|++ ..
T Consensus 71 ~~~~~~~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~-~---l~~l~-~~~~~~~~sv~svafSPDG--~~ 143 (588)
T 2j04_A 71 FELAQQNGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK-M---LTNLD-SKGNLSSRTYHCFEWNPIE--SS 143 (588)
T ss_dssp TSCCCSSCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE-E---EEECC-CSSCSTTTCEEEEEECSSS--SC
T ss_pred EEeCCCceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc-e---eeecc-CCCccccccEEEEEEcCCC--CE
Confidence 1 5677899999999999999999999999999643 1 11122 33 259999999987 57
Q ss_pred EEEEeCCCcEEEEECCCcee-------EEEE----cCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCce---EEEe
Q 048118 142 IVSASWDRTVKVWNLSNCKL-------RATL----AGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKR---LYSL 207 (303)
Q Consensus 142 ~~~~~~dg~i~iwd~~~~~~-------~~~~----~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~---~~~~ 207 (303)
+++|+.||.|++||+.+++. ..++ .+|.+.|.+++|+|+| +++++.|++|++||+.+++. ..++
T Consensus 144 LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL 221 (588)
T 2j04_A 144 IVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMI 221 (588)
T ss_dssp EEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEE
T ss_pred EEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeee
Confidence 99999999999999988752 4665 6677899999999999 88889999999999987763 2344
Q ss_pred --cCCCeEEEEEEcCCCeEEEEEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEE--cCCC
Q 048118 208 --DAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNW--SVDG 283 (303)
Q Consensus 208 --~~~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--sp~~ 283 (303)
.+...|.+++|+ +..++++.++.|++||+.+++.... . .+|...+.+++| +|++
T Consensus 222 ~~~h~~~V~svaFs--g~~LASa~~~tIkLWd~~~~~~~~~-~-------------------~gh~~~V~~va~~~s~d~ 279 (588)
T 2j04_A 222 QNASRRKITDLKIV--DYKVVLTCPGYVHKIDLKNYSISSL-K-------------------TGSLENFHIIPLNHEKES 279 (588)
T ss_dssp ECCCSSCCCCEEEE--TTEEEEECSSEEEEEETTTTEEEEE-E-------------------CSCCSCCCEEEETTCSSC
T ss_pred cccccCcEEEEEEE--CCEEEEEeCCeEEEEECCCCeEEEE-E-------------------cCCCceEEEEEeeeCCCC
Confidence 234689999999 4667777789999999988765321 1 134455677999 9999
Q ss_pred CEEEEeecCCeEEEEecc
Q 048118 284 STLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 284 ~~l~~gs~Dg~v~~w~~~ 301 (303)
..|++++.||+ ++|..+
T Consensus 280 ~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 280 TILLMSNKTSY-KVLLED 296 (588)
T ss_dssp EEEEECSSCEE-EEEESS
T ss_pred CEEEEEcCCCC-EEEeec
Confidence 99999999999 999864
No 71
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.9e-31 Score=223.82 Aligned_cols=202 Identities=26% Similarity=0.445 Sum_probs=164.9
Q ss_pred ceecccCCEEEEEE-----ee-CCCEEEEEeCCCcEEEEecCCce-----eeeeecCCCCccceEEEEEcCCCCCCEEEE
Q 048118 76 QFVGHTKDVLSVAF-----SI-DNRQIVSASRDRTIKLWNTLGEC-----KYTIQEGDAHTEWVSCVRFSPNTLQPTIVS 144 (303)
Q Consensus 76 ~~~~h~~~i~~i~~-----~~-~~~~l~t~~~d~~i~vw~~~~~~-----~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 144 (303)
.+.+|.+.|++++| ++ ++.+|++|+.|+.|++|++.... .........|...|.+++|+|++ ..+++
T Consensus 16 ~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~--~~l~s 93 (343)
T 2xzm_R 16 ILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQEN--CFAIS 93 (343)
T ss_dssp EEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSST--TEEEE
T ss_pred eeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCC--CEEEE
Confidence 46789999999999 66 89999999999999999975321 11223335788899999999975 57999
Q ss_pred EeCCCcEEEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEe---cCCCeEEEEEEcCC
Q 048118 145 ASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL---DAGAVIHALCFSPN 221 (303)
Q Consensus 145 ~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~---~~~~~v~~~~~s~~ 221 (303)
++.|+.|++||+++++....+.+|...|.+++|+|++++|++++.|++|++||+......... .....+.+++|+|+
T Consensus 94 ~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 173 (343)
T 2xzm_R 94 SSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPI 173 (343)
T ss_dssp EETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCC
T ss_pred EcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccc
Confidence 999999999999999999999999999999999999999999999999999999844332222 24567999999998
Q ss_pred C-----------eEEEEEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEee
Q 048118 222 R-----------YWLCAATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGY 290 (303)
Q Consensus 222 ~-----------~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs 290 (303)
+ .+++++.|+.|++||.+ .+... .+..|...+.+++|+|++++|++|+
T Consensus 174 ~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~--------------------~~~~h~~~v~~~~~s~~g~~l~sgs 232 (343)
T 2xzm_R 174 MKSANKVQPFAPYFASVGWDGRLKVWNTN-FQIRY--------------------TFKAHESNVNHLSISPNGKYIATGG 232 (343)
T ss_dssp CCSCSCCCSSCCEEEEEETTSEEEEEETT-TEEEE--------------------EEECCSSCEEEEEECTTSSEEEEEE
T ss_pred cccccccCCCCCEEEEEcCCCEEEEEcCC-CceeE--------------------EEcCccccceEEEECCCCCEEEEEc
Confidence 5 45566779999999953 32221 1233455678899999999999999
Q ss_pred cCCeEEEEec
Q 048118 291 TDGVIRVWGI 300 (303)
Q Consensus 291 ~Dg~v~~w~~ 300 (303)
.||.|++||+
T Consensus 233 ~dg~v~iwd~ 242 (343)
T 2xzm_R 233 KDKKLLIWDI 242 (343)
T ss_dssp TTCEEEEEES
T ss_pred CCCeEEEEEC
Confidence 9999999998
No 72
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1e-31 Score=234.69 Aligned_cols=287 Identities=16% Similarity=0.243 Sum_probs=193.7
Q ss_pred eecccccccc------------cceeeeecCCCCC-cEEEEecCCCcEEEEEcccCccccceeeeeecCCCc--------
Q 048118 6 VLKGTMRAHT------------DMVTAIATPIDNS-DMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSH-------- 64 (303)
Q Consensus 6 ~~~~~~~~h~------------~~v~~v~~~~~~~-~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~-------- 64 (303)
.+...+.+|. +.|++++|+|++. .+|++++.|++|++|++........ ...+..+..
T Consensus 72 ~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~--~~~~~~~~g~~~~~~~~ 149 (447)
T 3dw8_B 72 NVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPE--GYNLKEEDGRYRDPTTV 149 (447)
T ss_dssp EEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEE--CCSCC--------CCCC
T ss_pred eEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcc--eecccCccccccCcccc
Confidence 3566788998 8899999999753 5899999999999999865321100 000000000
Q ss_pred ------ceEE----EEeCCCCc-eecccCCEEEEEEeeCCCEEEEEeCCCcEEEEecCCce-eeeee-----cCCCCccc
Q 048118 65 ------FVQD----VVLSSDGQ-FVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGEC-KYTIQ-----EGDAHTEW 127 (303)
Q Consensus 65 ------~i~~----~~~~~~~~-~~~h~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~-~~~~~-----~~~~~~~~ 127 (303)
.... +...+... ..+|...|.+++|+|++.+|++| .|+.|++||+.... ..... ....|...
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 228 (447)
T 3dw8_B 150 TTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEV 228 (447)
T ss_dssp CSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCC
T ss_pred cceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcc
Confidence 0000 00000112 24799999999999999999998 79999999986322 11111 23357788
Q ss_pred eEEEEEcCCCCCCEEEEEeCCCcEEEEECCCcee----EEEEcCCCC------------CeeEEEECCCCCEEEEEeCCC
Q 048118 128 VSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKL----RATLAGHTG------------YVNTVAVSPDGSLCASGGKDG 191 (303)
Q Consensus 128 i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~----~~~~~~~~~------------~i~~~~~~~~~~~l~~~~~d~ 191 (303)
|.+++|+|++ ...+++++.||.|++||+++++. ...+..|.. .|.+++|+|++++|++++. +
T Consensus 229 v~~~~~~p~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~ 306 (447)
T 3dw8_B 229 ITAAEFHPNS-CNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-L 306 (447)
T ss_dssp EEEEEECSSC-TTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-S
T ss_pred eEEEEECCCC-CcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-C
Confidence 9999999985 24799999999999999998776 677888876 8999999999999999998 9
Q ss_pred eEEEEeCCC-CceEEEecCCCe----------------EEEEEEcCCCeEEE-EEcCCcEEEEeCCCCceeeeeeecccc
Q 048118 192 VILLWDLAE-GKRLYSLDAGAV----------------IHALCFSPNRYWLC-AATEQSIKIWDLESKSIVEDLKVDLKT 253 (303)
Q Consensus 192 ~v~iwd~~~-~~~~~~~~~~~~----------------v~~~~~s~~~~~l~-~~~~~~i~iwd~~~~~~~~~~~~~~~~ 253 (303)
.|++||++. ++.+..+..... +..++|+|++.+++ ++.|+.|++||+++++.+. +......
T Consensus 307 ~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~-~~~~~~~ 385 (447)
T 3dw8_B 307 SVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT-LEASREN 385 (447)
T ss_dssp EEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE-EECCSTT
T ss_pred eEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee-eeecccc
Confidence 999999986 666655543221 23489999987665 4569999999999887652 2111100
Q ss_pred ccccccC-------------ccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEe
Q 048118 254 EAEKSEA-------------TTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWG 299 (303)
Q Consensus 254 ~~~~~~~-------------~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~ 299 (303)
....... .......-.....+..++|+|++.+||+|+.++ +++|.
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~ 443 (447)
T 3dw8_B 386 NKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQ 443 (447)
T ss_dssp CCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEE
T ss_pred cccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecce-eeeec
Confidence 0000000 000000011223467799999999999999887 55554
No 73
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=8.7e-31 Score=237.53 Aligned_cols=288 Identities=14% Similarity=0.196 Sum_probs=221.5
Q ss_pred eecccccccccc-eeeeecCC--CCCcEEEEecCCCcEEEEEcccCcc---ccceeeeeecCCCcceEEEEeCCCCce--
Q 048118 6 VLKGTMRAHTDM-VTAIATPI--DNSDMIVTASRDKSIIVWHLTKEEK---TYGVARRRLTGHSHFVQDVVLSSDGQF-- 77 (303)
Q Consensus 6 ~~~~~~~~h~~~-v~~v~~~~--~~~~~~~t~s~d~~i~iw~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~-- 77 (303)
.....+.+|.+. |++++|+| ++ ++|++|+.|++|++|++..... ........+..|...|..+.++|++++
T Consensus 54 ~~~~~~~~h~~~~v~~~~~sp~~~~-~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 132 (615)
T 1pgu_A 54 PPVVQFTGHGSSVVTTVKFSPIKGS-QYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLC 132 (615)
T ss_dssp CSEEEECTTTTSCEEEEEECSSTTC-CEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEE
T ss_pred ccceEEecCCCceEEEEEECcCCCC-CEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEE
Confidence 445578899999 99999998 64 6999999999999999964310 012334556678889999999988642
Q ss_pred ------------------------ecccCCEEEEEEeeCCC-EEEEEeCCCcEEEEecCCceeeeeecCCCCcc---ceE
Q 048118 78 ------------------------VGHTKDVLSVAFSIDNR-QIVSASRDRTIKLWNTLGECKYTIQEGDAHTE---WVS 129 (303)
Q Consensus 78 ------------------------~~h~~~i~~i~~~~~~~-~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~---~i~ 129 (303)
.+|...|.+++|+|++. ++++++.|+.|++||....... .....|.. .|.
T Consensus 133 ~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~--~~~~~~~~~~~~v~ 210 (615)
T 1pgu_A 133 VVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFS--ASDRTHHKQGSFVR 210 (615)
T ss_dssp EEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEE--EEECSSSCTTCCEE
T ss_pred EeccCCCCccEEEEEECCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCccee--eeecccCCCCceEE
Confidence 36888999999999998 8999999999999998654322 22245666 899
Q ss_pred EEEEcCC-CCCCEEEEEeCCCcEEEEECCCceeEEEE-c---CCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceE
Q 048118 130 CVRFSPN-TLQPTIVSASWDRTVKVWNLSNCKLRATL-A---GHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRL 204 (303)
Q Consensus 130 ~~~~~~~-~~~~~~~~~~~dg~i~iwd~~~~~~~~~~-~---~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~ 204 (303)
+++|+|+ + ..+++++.|+.|++||+.+++....+ . .|...|.+++|+ ++++|++++.|+.|++||+++++.+
T Consensus 211 ~~~~~~~~~--~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~ 287 (615)
T 1pgu_A 211 DVEFSPDSG--EFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCV 287 (615)
T ss_dssp EEEECSTTC--CEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEE
T ss_pred EEEECCCCC--CEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEE
Confidence 9999998 5 47999999999999999999988888 6 899999999999 9999999999999999999999888
Q ss_pred EEecCC-----CeEEEEEEcCCCeEEEEEcCCcEEEEeCCCCceeeeeeecccccc--cccc------------Ccccee
Q 048118 205 YSLDAG-----AVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLKTEA--EKSE------------ATTATT 265 (303)
Q Consensus 205 ~~~~~~-----~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~--~~~~------------~~~~~~ 265 (303)
..+... ..+.++.|+.+..+++++.++.|++||+++++.+..+..+..... .... ......
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~ 367 (615)
T 1pgu_A 288 QKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSM 367 (615)
T ss_dssp EEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEE
T ss_pred EEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhh
Confidence 777544 567888887556677778899999999988776655432211000 0000 000011
Q ss_pred eccccceeEEEEEEcCCCCEEEEeecCCeEEEEecc
Q 048118 266 TIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 266 ~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~ 301 (303)
. ..+...+.+++| +++.+|++++.||.+++|++.
T Consensus 368 ~-~~~~~~v~~~~~-~~~~~l~~~~~d~~i~~~~~~ 401 (615)
T 1pgu_A 368 H-QDHSNLIVSLDN-SKAQEYSSISWDDTLKVNGIT 401 (615)
T ss_dssp E-CCCCSCEEEEEC-CSTTCCEEEETTTEEEETTEE
T ss_pred c-CcccCceEEEEE-CCCcEEEEEeCCCCEEEEEcc
Confidence 1 345566788888 567888999999999999874
No 74
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1e-30 Score=229.82 Aligned_cols=242 Identities=29% Similarity=0.475 Sum_probs=192.8
Q ss_pred cccccccccce-eeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEE
Q 048118 8 KGTMRAHTDMV-TAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLS 86 (303)
Q Consensus 8 ~~~~~~h~~~v-~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~ 86 (303)
...+++|.+.| +++.++ ++++++|+.|++|++||+..... .. .+.+|.+.|.+
T Consensus 114 ~~~l~~h~~~v~~~~~~~---~~~l~sgs~dg~i~vwd~~~~~~-----~~------------------~~~~h~~~V~~ 167 (464)
T 3v7d_B 114 RTTLRGHMTSVITCLQFE---DNYVITGADDKMIRVYDSINKKF-----LL------------------QLSGHDGGVWA 167 (464)
T ss_dssp EEEEECCSSSCEEEEEEE---TTEEEEEETTSCEEEEETTTTEE-----EE------------------EECCCSSCEEE
T ss_pred eEEEcCCCCCcEEEEEEC---CCEEEEEcCCCcEEEEECCCCcE-----EE------------------EEeCCCcCEEE
Confidence 34688998885 666664 36999999999999999865321 11 24579999999
Q ss_pred EEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCce------
Q 048118 87 VAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCK------ 160 (303)
Q Consensus 87 i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~------ 160 (303)
++|++++ ++++|+.|+.|++||+..... ......|...|.+++|++......+++++.|+.|++||+.+.+
T Consensus 168 l~~~~~~-~l~s~s~dg~i~vwd~~~~~~--~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~ 244 (464)
T 3v7d_B 168 LKYAHGG-ILVSGSTDRTVRVWDIKKGCC--THVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHG 244 (464)
T ss_dssp EEECSTT-EEEEEETTSCEEEEETTTTEE--EEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC----
T ss_pred EEEcCCC-EEEEEeCCCCEEEEECCCCcE--EEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCccccccc
Confidence 9999988 999999999999999865432 2223468889999999964434689999999999999997654
Q ss_pred -----------------eEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEec-CCCeEEEEEEcCCC
Q 048118 161 -----------------LRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLD-AGAVIHALCFSPNR 222 (303)
Q Consensus 161 -----------------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~ 222 (303)
....+.+|...+.++ +++++++++++.|+.|++||+++++.+..+. ....+.+++|+|++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 322 (464)
T 3v7d_B 245 EEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHER 322 (464)
T ss_dssp --CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTT
T ss_pred ccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCC
Confidence 245677888888877 5678999999999999999999999888875 46789999999997
Q ss_pred eEE-EEEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEecc
Q 048118 223 YWL-CAATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 223 ~~l-~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~ 301 (303)
.++ +++.|+.|++||+++++.+..+. .+...+.+++|+ +.+|++|+.||.|++||+.
T Consensus 323 ~~l~sg~~dg~i~vwd~~~~~~~~~~~--------------------~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~ 380 (464)
T 3v7d_B 323 KRCISASMDTTIRIWDLENGELMYTLQ--------------------GHTALVGLLRLS--DKFLVSAAADGSIRGWDAN 380 (464)
T ss_dssp TEEEEEETTSCEEEEETTTTEEEEEEC--------------------CCSSCEEEEEEC--SSEEEEEETTSEEEEEETT
T ss_pred CEEEEEeCCCcEEEEECCCCcEEEEEe--------------------CCCCcEEEEEEc--CCEEEEEeCCCcEEEEECC
Confidence 655 55678999999999887665432 334456778887 5799999999999999986
Q ss_pred c
Q 048118 302 R 302 (303)
Q Consensus 302 ~ 302 (303)
.
T Consensus 381 ~ 381 (464)
T 3v7d_B 381 D 381 (464)
T ss_dssp T
T ss_pred C
Confidence 4
No 75
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.4e-30 Score=217.22 Aligned_cols=243 Identities=23% Similarity=0.365 Sum_probs=192.0
Q ss_pred cccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEE
Q 048118 10 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAF 89 (303)
Q Consensus 10 ~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~ 89 (303)
.+++|...|++++|+|++ ++|++|+.|++|++|++..... .. .+.+|...+.++
T Consensus 62 ~~~~~~~~V~~v~~~~~~-~~l~sgs~Dg~v~iw~~~~~~~-----~~------------------~~~~h~~~~~~~-- 115 (318)
T 4ggc_A 62 QMEQPGEYISSVAWIKEG-NYLAVGTSSAEVQLWDVQQQKR-----LR------------------NMTSHSARVGSL-- 115 (318)
T ss_dssp ECCSTTCCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEE-----EE------------------EEECCSSCEEEE--
T ss_pred EecCCCCeEEEEEECCCC-CEEEEEECCCcEEEeecCCcee-----EE------------------EecCccceEEEe--
Confidence 467888999999999875 6999999999999999875421 11 234677777654
Q ss_pred eeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCce----eEEEE
Q 048118 90 SIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCK----LRATL 165 (303)
Q Consensus 90 ~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~----~~~~~ 165 (303)
++++..+++++.++.+++|+....... ......|...+.++.+++++ ..+++++.|+.|++||+++++ .....
T Consensus 116 ~~~~~~l~s~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~ 192 (318)
T 4ggc_A 116 SWNSYILSSGSRSGHIHHHDVRVAEHH-VATLSGHSQEVCGLRWAPDG--RHLASGGNDNLVNVWPSAPGEGGWVPLQTF 192 (318)
T ss_dssp EEETTEEEEEETTSEEEEEETTSSSCE-EEEEECCSSCEEEEEECTTS--SEEEEEETTSCEEEEESSCBTTBSCCSEEE
T ss_pred ecCCCEEEEEecCCceEeeecCCCcee-EEEEcCccCceEEEEEcCCC--CEEEEEecCcceeEEECCCCcccccceeee
Confidence 455679999999999999987543221 22224577789999999876 579999999999999998754 23455
Q ss_pred cCCCCCeeEEEECCCCC-EE--EEEeCCCeEEEEeCCCCceEEEecCCCeEEEEEEcCCCeEEE-EE--cCCcEEEEeCC
Q 048118 166 AGHTGYVNTVAVSPDGS-LC--ASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLC-AA--TEQSIKIWDLE 239 (303)
Q Consensus 166 ~~~~~~i~~~~~~~~~~-~l--~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~--~~~~i~iwd~~ 239 (303)
..+.+.|..+.++|++. .+ ++++.+++|++||.+.............+..+.|+|++..++ ++ .|+.|++||++
T Consensus 193 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~ 272 (318)
T 4ggc_A 193 TQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYP 272 (318)
T ss_dssp CCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETT
T ss_pred cccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECC
Confidence 66788999999999765 33 466789999999999988887777778899999999875443 33 58999999999
Q ss_pred CCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEecc
Q 048118 240 SKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~ 301 (303)
+++.+..+ .+|...+++++|+|++++|+|||.||+|++||+.
T Consensus 273 ~~~~~~~l--------------------~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~ 314 (318)
T 4ggc_A 273 TMAKVAEL--------------------KGHTSRVLSLTMSPDGATVASAAADETLRLWRCF 314 (318)
T ss_dssp TCCEEEEE--------------------CCCSSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred CCcEEEEE--------------------cCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 88776543 3455678899999999999999999999999985
No 76
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.1e-30 Score=222.05 Aligned_cols=226 Identities=22% Similarity=0.375 Sum_probs=171.0
Q ss_pred eeeecCCCcceEEEEeCCCCce------------------------ecccCCEEEEEEeeCCCEEEEEeCCCcEEEEecC
Q 048118 56 RRRLTGHSHFVQDVVLSSDGQF------------------------VGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTL 111 (303)
Q Consensus 56 ~~~~~~~~~~i~~~~~~~~~~~------------------------~~h~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~ 111 (303)
...+.+|...|.++.++|++++ ..|...|.+++|+|++.++++++.|+.+++|++.
T Consensus 57 ~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~ 136 (354)
T 2pbi_B 57 RRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLT 136 (354)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECC
T ss_pred EEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEe
Confidence 3445566666666666665431 2345556677777777777777777777777653
Q ss_pred Cce----eeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEEEcCCCCCeeEEEECC--CCCEEE
Q 048118 112 GEC----KYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSP--DGSLCA 185 (303)
Q Consensus 112 ~~~----~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~ 185 (303)
... .........|...|.+++|+|++ ..+++++.|+.|++||+.++++...+.+|...|.+++++| ++++|+
T Consensus 137 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~ 214 (354)
T 2pbi_B 137 FDKNENMAAKKKSVAMHTNYLSACSFTNSD--MQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFV 214 (354)
T ss_dssp CCTTCCSGGGCEEEEECSSCEEEEEECSSS--SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEE
T ss_pred ccccccccccceeeeccCCcEEEEEEeCCC--CEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEE
Confidence 210 00011112477789999999985 4799999999999999999999999999999999999988 468999
Q ss_pred EEeCCCeEEEEeCCCCceEEEec-CCCeEEEEEEcCCCeEEE-EEcCCcEEEEeCCCCceeeeeeeccccccccccCccc
Q 048118 186 SGGKDGVILLWDLAEGKRLYSLD-AGAVIHALCFSPNRYWLC-AATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTA 263 (303)
Q Consensus 186 ~~~~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~-~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (303)
+|+.||+|++||+++++.+..+. +...|.+++|+|++.+++ ++.|+.|++||++.++.+..+..
T Consensus 215 sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~-------------- 280 (354)
T 2pbi_B 215 SGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSK-------------- 280 (354)
T ss_dssp EEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC--------------
T ss_pred EEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC--------------
Confidence 99999999999999999888775 467899999999986555 55699999999988765432211
Q ss_pred eeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEecc
Q 048118 264 TTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 264 ~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~ 301 (303)
......+.+++|+|++.+|++|+.||.|++||+.
T Consensus 281 ----~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~ 314 (354)
T 2pbi_B 281 ----ESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVL 314 (354)
T ss_dssp ----TTCCSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred ----CCcccceeEEEEeCCCCEEEEEECCCcEEEEECC
Confidence 0112235679999999999999999999999974
No 77
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.9e-30 Score=223.68 Aligned_cols=208 Identities=22% Similarity=0.456 Sum_probs=168.7
Q ss_pred ecccCCEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeee-eecCC---------------CCccceEEEEEcCCCCCCE
Q 048118 78 VGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYT-IQEGD---------------AHTEWVSCVRFSPNTLQPT 141 (303)
Q Consensus 78 ~~h~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~-~~~~~---------------~~~~~i~~~~~~~~~~~~~ 141 (303)
.+|.+.|.+++|+|+|++|++++ ++.+++|+........ +.... .+...|.+++|+|++ ..
T Consensus 61 ~~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg--~~ 137 (393)
T 1erj_A 61 LDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDG--KF 137 (393)
T ss_dssp EECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTS--SE
T ss_pred cCCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCC--CE
Confidence 36999999999999999999876 6899999975432211 11000 122358999999986 57
Q ss_pred EEEEeCCCcEEEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEecCCCeEEEEEEcC-
Q 048118 142 IVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSP- 220 (303)
Q Consensus 142 ~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~- 220 (303)
+++|+.|+.|++||+.+++....+.+|...|.+++|+|++++|++++.|++|++||+++++....+.....+.+++|+|
T Consensus 138 l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~ 217 (393)
T 1erj_A 138 LATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPG 217 (393)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECST
T ss_pred EEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECC
Confidence 9999999999999999999999999999999999999999999999999999999999999888887778899999999
Q ss_pred CCeEE-EEEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEe
Q 048118 221 NRYWL-CAATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWG 299 (303)
Q Consensus 221 ~~~~l-~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~ 299 (303)
++.++ +++.|+.|++||+++++.+..+.... ....+|...+.+++|+|++.+|++|+.||.|++||
T Consensus 218 ~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~-------------~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd 284 (393)
T 1erj_A 218 DGKYIAAGSLDRAVRVWDSETGFLVERLDSEN-------------ESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWN 284 (393)
T ss_dssp TCCEEEEEETTSCEEEEETTTCCEEEEEC-------------------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEeecccc-------------cCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 66555 45679999999999887765543210 01234556678999999999999999999999999
Q ss_pred cc
Q 048118 300 IG 301 (303)
Q Consensus 300 ~~ 301 (303)
+.
T Consensus 285 ~~ 286 (393)
T 1erj_A 285 LQ 286 (393)
T ss_dssp C-
T ss_pred CC
Confidence 84
No 78
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.3e-31 Score=220.34 Aligned_cols=226 Identities=23% Similarity=0.334 Sum_probs=168.5
Q ss_pred ccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCcc--ccceeeeeecCCCcceEEEEeCCCCc--------------
Q 048118 13 AHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEK--TYGVARRRLTGHSHFVQDVVLSSDGQ-------------- 76 (303)
Q Consensus 13 ~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~-------------- 76 (303)
+|.+.|++++|+|++ .+|++|+.|++|++|++..... ........+.+|...|.++.++|+++
T Consensus 56 ~h~~~v~~v~~sp~~-~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iw 134 (330)
T 2hes_X 56 AHKKAIRSVAWRPHT-SLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIW 134 (330)
T ss_dssp CCCSCEEEEEECTTS-SEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEE
T ss_pred CccCCEEEEEECCCC-CEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEE
Confidence 399999999999975 6899999999999999853211 11234556778999999999988753
Q ss_pred --------------eecccCCEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEE
Q 048118 77 --------------FVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTI 142 (303)
Q Consensus 77 --------------~~~h~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 142 (303)
+.+|...|.+++|+|++.+|++++.|+.|++|+........+.....|...|.+++|+|+.....+
T Consensus 135 d~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l 214 (330)
T 2hes_X 135 ETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRL 214 (330)
T ss_dssp ECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEE
T ss_pred eccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEE
Confidence 236888999999999999999999999999999754322233344578889999999997434579
Q ss_pred EEEeCCCcEEEEECCCc--------eeEEEEcC-CCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCc--eEEEe--cC
Q 048118 143 VSASWDRTVKVWNLSNC--------KLRATLAG-HTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK--RLYSL--DA 209 (303)
Q Consensus 143 ~~~~~dg~i~iwd~~~~--------~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~--~~~~~--~~ 209 (303)
++++.|+.|++||+.+. .+...+.. |...|.+++|++++ +|++++.||+|++||..+++ .+... .+
T Consensus 215 ~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h 293 (330)
T 2hes_X 215 CSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCH 293 (330)
T ss_dssp EEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTT
T ss_pred EEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEecccccc
Confidence 99999999999998653 33444554 88999999999765 78999999999999998764 23332 23
Q ss_pred CC-eEEEEEEcC--CCeEE-EEEcCCcEEEEeCCC
Q 048118 210 GA-VIHALCFSP--NRYWL-CAATEQSIKIWDLES 240 (303)
Q Consensus 210 ~~-~v~~~~~s~--~~~~l-~~~~~~~i~iwd~~~ 240 (303)
.. .+.+++|+| ++.+| +++.|+.|++||++.
T Consensus 294 ~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 294 GVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp TTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred ccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 33 799999999 56544 567799999999864
No 79
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.8e-30 Score=224.25 Aligned_cols=241 Identities=20% Similarity=0.344 Sum_probs=190.4
Q ss_pred ccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEe
Q 048118 11 MRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFS 90 (303)
Q Consensus 11 ~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~ 90 (303)
..+|.+.++...+++.+ +.+++++.|+.|++|++...... ... ...|...|.+++|+
T Consensus 87 ~~~~~~~~~~~~~~~s~-~~l~~~~~d~~v~lw~~~~~~~~-----~~~-----------------~~~~~~~v~~v~~s 143 (401)
T 4aez_A 87 APGIIDDYYLNLLDWSN-LNVVAVALERNVYVWNADSGSVS-----ALA-----------------ETDESTYVASVKWS 143 (401)
T ss_dssp CTTCCCCTTCBCEEECT-TSEEEEEETTEEEEEETTTCCEE-----EEE-----------------ECCTTCCEEEEEEC
T ss_pred CCCCcCCceEEEEeecC-CCEEEEECCCeEEEeeCCCCcEe-----Eee-----------------ecCCCCCEEEEEEC
Confidence 44666664443333333 45888999999999998654321 000 11377899999999
Q ss_pred eCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECC-CceeEEEEcCCC
Q 048118 91 IDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLS-NCKLRATLAGHT 169 (303)
Q Consensus 91 ~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~-~~~~~~~~~~~~ 169 (303)
|++.+|++++.|+.|++||....... .....|...|.+++|++ ..+++++.||.|++||++ .......+.+|.
T Consensus 144 ~~~~~l~~~~~dg~i~iwd~~~~~~~--~~~~~~~~~v~~~~~~~----~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 217 (401)
T 4aez_A 144 HDGSFLSVGLGNGLVDIYDVESQTKL--RTMAGHQARVGCLSWNR----HVLSSGSRSGAIHHHDVRIANHQIGTLQGHS 217 (401)
T ss_dssp TTSSEEEEEETTSCEEEEETTTCCEE--EEECCCSSCEEEEEEET----TEEEEEETTSEEEEEETTSSSCEEEEEECCS
T ss_pred CCCCEEEEECCCCeEEEEECcCCeEE--EEecCCCCceEEEEECC----CEEEEEcCCCCEEEEecccCcceeeEEcCCC
Confidence 99999999999999999998654322 22246788899999965 379999999999999998 466778888999
Q ss_pred CCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEec-CCCeEEEEEEcCCC-eEEEEE---cCCcEEEEeCCCCcee
Q 048118 170 GYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLD-AGAVIHALCFSPNR-YWLCAA---TEQSIKIWDLESKSIV 244 (303)
Q Consensus 170 ~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~-~~l~~~---~~~~i~iwd~~~~~~~ 244 (303)
+.|.+++|+|++++|++++.|+.|++||+++++.+..+. ....+.+++|+|++ .+++++ .|+.|++||+++++.+
T Consensus 218 ~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~ 297 (401)
T 4aez_A 218 SEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARV 297 (401)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEE
T ss_pred CCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEE
Confidence 999999999999999999999999999999988887774 56789999999975 566655 4899999999988776
Q ss_pred eeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEE--eecCCeEEEEecc
Q 048118 245 EDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFS--GYTDGVIRVWGIG 301 (303)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~--gs~Dg~v~~w~~~ 301 (303)
..+.. ...+.+++|+|++++|++ |+.||.|++|++.
T Consensus 298 ~~~~~---------------------~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~ 335 (401)
T 4aez_A 298 NTVDA---------------------GSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYS 335 (401)
T ss_dssp EEEEC---------------------SSCEEEEEECSSSSEEEEEECTTTCEEEEEEEE
T ss_pred EEEeC---------------------CCcEEEEEECCCCCeEEEEeecCCCcEEEEecC
Confidence 54431 123678999999999998 5599999999975
No 80
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1e-29 Score=222.38 Aligned_cols=263 Identities=23% Similarity=0.404 Sum_probs=211.1
Q ss_pred eecccccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCC--------C--
Q 048118 6 VLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSD--------G-- 75 (303)
Q Consensus 6 ~~~~~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--------~-- 75 (303)
..+..+.+|.+.|+++.++ ++++++|+.|++|++|++...+ ....+.+|...|.++.+.++ +
T Consensus 150 ~~~~~~~~h~~~v~~~~~~---~~~l~s~~~dg~i~vwd~~~~~-----~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~i 221 (445)
T 2ovr_B 150 KCLRTLVGHTGGVWSSQMR---DNIIISGSTDRTLKVWNAETGE-----CIHTLYGHTSTVRCMHLHEKRVVSGSRDATL 221 (445)
T ss_dssp CEEEECCCCSSCEEEEEEE---TTEEEEEETTSCEEEEETTTTE-----EEEEECCCSSCEEEEEEETTEEEEEETTSEE
T ss_pred cEEEEEcCCCCCEEEEEec---CCEEEEEeCCCeEEEEECCcCc-----EEEEECCCCCcEEEEEecCCEEEEEeCCCEE
Confidence 3455788999999999997 3589999999999999986542 34556677777777766432 1
Q ss_pred ------------ceecccCCEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEE
Q 048118 76 ------------QFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIV 143 (303)
Q Consensus 76 ------------~~~~h~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 143 (303)
.+.+|...|.++++ ++.++++++.|+.|++||...... ......|...|.++.|+. ..++
T Consensus 222 ~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~~v~~~~~~~----~~l~ 293 (445)
T 2ovr_B 222 RVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETC--LHTLQGHTNRVYSLQFDG----IHVV 293 (445)
T ss_dssp EEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEE--EEEECCCSSCEEEEEECS----SEEE
T ss_pred EEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcE--eEEecCCCCceEEEEECC----CEEE
Confidence 23478999999998 788999999999999999854332 222346778899999932 4799
Q ss_pred EEeCCCcEEEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEec----CCCeEEEEEEc
Q 048118 144 SASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLD----AGAVIHALCFS 219 (303)
Q Consensus 144 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~----~~~~v~~~~~s 219 (303)
+++.|+.|++||+++++....+.+|...+.++.++ ++++++++.||.|++||+++++.+..+. ....|.+++|+
T Consensus 294 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 371 (445)
T 2ovr_B 294 SGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN 371 (445)
T ss_dssp EEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC
T ss_pred EEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEe--CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC
Confidence 99999999999999999999999999999988874 6799999999999999999999888875 45689999997
Q ss_pred CCCeEEEEEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCe----E
Q 048118 220 PNRYWLCAATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGV----I 295 (303)
Q Consensus 220 ~~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~----v 295 (303)
+ ..+++++.||.|++||+++++.+..+.... ...+...+++++|+|++.++++|+.||+ +
T Consensus 372 ~-~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~---------------~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l 435 (445)
T 2ovr_B 372 K-NFVITSSDDGTVKLWDLKTGEFIRNLVTLE---------------SGGSGGVVWRIRASNTKLVCAVGSRNGTEETKL 435 (445)
T ss_dssp S-SEEEEEETTSEEEEEETTTCCEEEEEEECT---------------TGGGTCEEEEEEECSSEEEEEEECSSSSSCCEE
T ss_pred C-CEEEEEeCCCeEEEEECCCCceeeeeeccc---------------cCCCCceEEEEEecCCEEEEEEcccCCCCccEE
Confidence 4 456667789999999999998876653210 1223456789999999999999999998 9
Q ss_pred EEEeccc
Q 048118 296 RVWGIGR 302 (303)
Q Consensus 296 ~~w~~~~ 302 (303)
.+||++.
T Consensus 436 ~v~df~~ 442 (445)
T 2ovr_B 436 LVLDFDV 442 (445)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9999863
No 81
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.7e-31 Score=223.94 Aligned_cols=232 Identities=12% Similarity=0.091 Sum_probs=174.3
Q ss_pred ecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEeeCCCEEEEEeC
Q 048118 22 ATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSIDNRQIVSASR 101 (303)
Q Consensus 22 ~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~~~~~l~t~~~ 101 (303)
++.++ +.++++|+.|++|++||+....... .+ ....|.++.++|. +++++.
T Consensus 43 ~~~~d-~~~l~sg~~Dg~v~iwd~~~~~~~~-----~~--------------------~~~~v~~~~~~~~---~~s~s~ 93 (343)
T 3lrv_A 43 SMYYD-KWVCMCRCEDGALHFTQLKDSKTIT-----TI--------------------TTPNPRTGGEHPA---IISRGP 93 (343)
T ss_dssp SSSEE-EEEEEEEEETTEEEEEEESSSSCEE-----EE--------------------EEECCCTTCCCCS---EEEECS
T ss_pred hhcCC-CCEEEEECCCCcEEEEECCCCcEEE-----EE--------------------ecCCceeeeeCCc---eEEecC
Confidence 34433 4789999999999999987543211 10 0234556677777 999999
Q ss_pred CCcEEEEecCCcee-------e-eeecCCCCccceEEEEEcC--CCCCCEEEEEeCCCcEEEEECCCceeEEEEc-CCCC
Q 048118 102 DRTIKLWNTLGECK-------Y-TIQEGDAHTEWVSCVRFSP--NTLQPTIVSASWDRTVKVWNLSNCKLRATLA-GHTG 170 (303)
Q Consensus 102 d~~i~vw~~~~~~~-------~-~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~-~~~~ 170 (303)
|+.|++|+..+... . .......|...|.+++|+| ++ ..+++++.||.|++||+++++...... .+..
T Consensus 94 D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~ 171 (343)
T 3lrv_A 94 CNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNT--EYFIWADNRGTIGFQSYEDDSQYIVHSAKSDV 171 (343)
T ss_dssp TTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---C--CEEEEEETTCCEEEEESSSSCEEEEECCCSSC
T ss_pred CCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCC--CEEEEEeCCCcEEEEECCCCcEEEEEecCCCC
Confidence 99999998653210 0 0111124557799999999 64 589999999999999999888766554 3456
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceE-EEecC--CCeEEEEEEcCCCeEEEEEcCCcEEEEeCCCCceeeee
Q 048118 171 YVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRL-YSLDA--GAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDL 247 (303)
Q Consensus 171 ~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~-~~~~~--~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~ 247 (303)
.+++++|+|++++|++|+.||.|++||+++++.+ ..+.. ...|.+++|+|++.+|++++++.|++||+++++.+..+
T Consensus 172 ~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~~~~~~ 251 (343)
T 3lrv_A 172 EYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVVCFDLRKDVGTLAY 251 (343)
T ss_dssp CCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEEEEETTSSTTCBSS
T ss_pred ceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCCcceee
Confidence 8999999999999999999999999999998877 66654 68999999999998888877889999999987654332
Q ss_pred eeccccccccccCccceeeccccceeE--EEEEEcCCCCEEEEeec-CCeEEEEecc
Q 048118 248 KVDLKTEAEKSEATTATTTIKKKNIYC--TSLNWSVDGSTLFSGYT-DGVIRVWGIG 301 (303)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~sp~~~~l~~gs~-Dg~v~~w~~~ 301 (303)
... ..+...+ .+++|+|++++|++|+. |+.+++|++.
T Consensus 252 ~~~-----------------~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~ 291 (343)
T 3lrv_A 252 PTY-----------------TIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFD 291 (343)
T ss_dssp CCC-----------------BC-----CCEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred ccc-----------------ccccccccceEEEECCCCCEEEEecCCCCcEEEEEEc
Confidence 210 0000111 35899999999999998 9999999874
No 82
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=7.2e-30 Score=239.01 Aligned_cols=228 Identities=21% Similarity=0.331 Sum_probs=190.8
Q ss_pred ecccccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCc----------
Q 048118 7 LKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQ---------- 76 (303)
Q Consensus 7 ~~~~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---------- 76 (303)
.+..+.+|...|++++|+|++ ++|++|+.|+.|++|++.... ....+.+|...|.++.++|++.
T Consensus 47 ~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vw~~~~~~-----~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 120 (814)
T 3mkq_A 47 EVRSIQVTETPVRAGKFIARK-NWIIVGSDDFRIRVFNYNTGE-----KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLT 120 (814)
T ss_dssp EEEEEECCSSCEEEEEEEGGG-TEEEEEETTSEEEEEETTTCC-----EEEEEECCSSCEEEEEECSSSSEEEEEETTSE
T ss_pred eEEEEecCCCcEEEEEEeCCC-CEEEEEeCCCeEEEEECCCCc-----EEEEEecCCCCEEEEEEeCCCCEEEEEcCCCE
Confidence 445678899999999999975 689999999999999987543 3455667888999999998764
Q ss_pred ---------------eecccCCEEEEEEee-CCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCC
Q 048118 77 ---------------FVGHTKDVLSVAFSI-DNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQP 140 (303)
Q Consensus 77 ---------------~~~h~~~i~~i~~~~-~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 140 (303)
+.+|.+.|.+++|+| ++..+++++.|+.|++||+......... ...+...+.+++|+|.+...
T Consensus 121 i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~ 199 (814)
T 3mkq_A 121 VKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTL-TTGQERGVNYVDYYPLPDKP 199 (814)
T ss_dssp EEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEE-ECCCTTCCCEEEECCSTTCC
T ss_pred EEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEE-ecCCCCCEEEEEEEECCCCC
Confidence 236889999999999 8889999999999999998543222111 12344678999999943346
Q ss_pred EEEEEeCCCcEEEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEecC-CCeEEEEEEc
Q 048118 141 TIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDA-GAVIHALCFS 219 (303)
Q Consensus 141 ~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~-~~~v~~~~~s 219 (303)
.+++++.||.|++||+.+++....+.+|...|.+++|+|++++|++++.||.|++||+.+++.+..+.. ...+.+++|+
T Consensus 200 ~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~ 279 (814)
T 3mkq_A 200 YMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATH 279 (814)
T ss_dssp EEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEEC
T ss_pred EEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEc
Confidence 899999999999999999999999999999999999999999999999999999999999988887754 4689999999
Q ss_pred CCCe--EEEEEcCCcEEEEeCCCC
Q 048118 220 PNRY--WLCAATEQSIKIWDLESK 241 (303)
Q Consensus 220 ~~~~--~l~~~~~~~i~iwd~~~~ 241 (303)
|++. +++++.++.+.+|++...
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~ 303 (814)
T 3mkq_A 280 PTGRKNYIASGFDNGFTVLSLGND 303 (814)
T ss_dssp TTCGGGEEEEEETTEEEEEECSCC
T ss_pred cCCCceEEEEEeCCCEEEEEcCCC
Confidence 9975 688888999999998654
No 83
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=9e-31 Score=255.50 Aligned_cols=292 Identities=24% Similarity=0.389 Sum_probs=224.0
Q ss_pred ecccccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccce--------------------------------
Q 048118 7 LKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGV-------------------------------- 54 (303)
Q Consensus 7 ~~~~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~-------------------------------- 54 (303)
....+.+|.+.|++++|+|++ +++++++.|++|++||+.........
T Consensus 735 ~~~~~~~h~~~v~~~~~sp~~-~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l 813 (1249)
T 3sfz_A 735 CRNTMFGHTNSVNHCRFSPDD-ELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKI 813 (1249)
T ss_dssp EEEEECCCSSCEEEEEECSST-TEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEE
T ss_pred hhheecCCCCCEEEEEEecCC-CEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEE
Confidence 344678999999999999875 68999999999999998643211000
Q ss_pred ------------------eeeeecCCCcceEEEEeCCCCc------------------------eecccCCEEEEEEeeC
Q 048118 55 ------------------ARRRLTGHSHFVQDVVLSSDGQ------------------------FVGHTKDVLSVAFSID 92 (303)
Q Consensus 55 ------------------~~~~~~~~~~~i~~~~~~~~~~------------------------~~~h~~~i~~i~~~~~ 92 (303)
......+|...+..+.++|++. +.+|.+.|.+++|+|+
T Consensus 814 ~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spd 893 (1249)
T 3sfz_A 814 IVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPD 893 (1249)
T ss_dssp EEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTT
T ss_pred EEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCC
Confidence 0011125566677777777653 3478999999999999
Q ss_pred CCEEEEEeCCCcEEEEecCCcee------------------------------eeeecC-----CCCccceEEEEEcCCC
Q 048118 93 NRQIVSASRDRTIKLWNTLGECK------------------------------YTIQEG-----DAHTEWVSCVRFSPNT 137 (303)
Q Consensus 93 ~~~l~t~~~d~~i~vw~~~~~~~------------------------------~~~~~~-----~~~~~~i~~~~~~~~~ 137 (303)
+.++++++.|+.|++|+...... ...... ......+.+++|+|++
T Consensus 894 g~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g 973 (1249)
T 3sfz_A 894 GSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHL 973 (1249)
T ss_dssp SSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTS
T ss_pred CCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCC
Confidence 99999999999999998531100 000000 0123458899999986
Q ss_pred CCCEEEEEeCCCcEEEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEecCCCeEEEEE
Q 048118 138 LQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALC 217 (303)
Q Consensus 138 ~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~ 217 (303)
..+++|+.+|.|++||+.+++....+.+|...|++++|+|++++|++++.||.|++||+.+++.+........+.+++
T Consensus 974 --~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~ 1051 (1249)
T 3sfz_A 974 --EYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFR 1051 (1249)
T ss_dssp --SEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEEEEE
T ss_pred --CEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEEEEE
Confidence 579999999999999999999888899999999999999999999999999999999999988876666778899999
Q ss_pred EcCCCeEEEEEcCCcEEEEeCCCCceeeeeeecccc--------cc-------cc-------ccCccceeeccccceeEE
Q 048118 218 FSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLKT--------EA-------EK-------SEATTATTTIKKKNIYCT 275 (303)
Q Consensus 218 ~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~--------~~-------~~-------~~~~~~~~~~~~~~~~~~ 275 (303)
|+|++.+++++.++.|++||+.+++.+..+..+... .. .. .........+..+...+.
T Consensus 1052 ~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~ 1131 (1249)
T 3sfz_A 1052 LLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVR 1131 (1249)
T ss_dssp ECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCCCCCSSCEE
T ss_pred EcCCCcEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcceeeeeccCCCcEE
Confidence 999999999999999999999988776554322110 00 00 001112234455667789
Q ss_pred EEEEcCCCCEEEEeecCCeEEEEecc
Q 048118 276 SLNWSVDGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 276 ~~~~sp~~~~l~~gs~Dg~v~~w~~~ 301 (303)
+++|+|++++|++|+.||.|++||+.
T Consensus 1132 ~~~~s~dg~~lat~~~dg~i~vwd~~ 1157 (1249)
T 3sfz_A 1132 CSAFSLDGILLATGDDNGEIRIWNVS 1157 (1249)
T ss_dssp EEEECSSSSEEEEEETTSCCCEEESS
T ss_pred EEEECCCCCEEEEEeCCCEEEEEECC
Confidence 99999999999999999999999985
No 84
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.6e-31 Score=222.35 Aligned_cols=208 Identities=21% Similarity=0.329 Sum_probs=158.5
Q ss_pred eecccCCEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEEC
Q 048118 77 FVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNL 156 (303)
Q Consensus 77 ~~~h~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~ 156 (303)
+.+|.+.|.+++|+|++++|++|+.|+.|++||+.............|...|.+++|+|......+++++.|+.|++||+
T Consensus 9 ~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~ 88 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWRE 88 (316)
T ss_dssp -----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECC
T ss_pred cccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEEC
Confidence 45799999999999999999999999999999986432222233346888999999986321247999999999999999
Q ss_pred CCc--eeEEEEcCCCCCeeEEEECCC--CCEEEEEeCCCeEEEEeCCCCceE---EEe-cCCCeEEEEEEcCCC------
Q 048118 157 SNC--KLRATLAGHTGYVNTVAVSPD--GSLCASGGKDGVILLWDLAEGKRL---YSL-DAGAVIHALCFSPNR------ 222 (303)
Q Consensus 157 ~~~--~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~v~iwd~~~~~~~---~~~-~~~~~v~~~~~s~~~------ 222 (303)
+++ +....+.+|...|.+++|+|+ +.+|++|+.|++|++||++.+... ..+ .+...+.+++|+|+.
T Consensus 89 ~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 168 (316)
T 3bg1_A 89 ENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLI 168 (316)
T ss_dssp SSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC----
T ss_pred CCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcccc
Confidence 876 355678889999999999997 789999999999999999875322 112 234568889999872
Q ss_pred ------------eEEEEEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCC----CEE
Q 048118 223 ------------YWLCAATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDG----STL 286 (303)
Q Consensus 223 ------------~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~----~~l 286 (303)
.+++++.|+.|++||++....... ...+..|...+.+++|+|++ .+|
T Consensus 169 ~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~-----------------~~~l~~h~~~V~~v~~sp~~~~~~~~l 231 (316)
T 3bg1_A 169 DHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKE-----------------EQKLEAHSDWVRDVAWAPSIGLPTSTI 231 (316)
T ss_dssp --CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEE-----------------EECCBCCSSCEEEEECCCCSSCSCCEE
T ss_pred ccccccCccccceEEEecCCCeEEEEEeCCCCccce-----------------eeecccCCCceEEEEecCCCCCCCceE
Confidence 445566799999999865421111 11234566678899999986 789
Q ss_pred EEeecCCeEEEEecc
Q 048118 287 FSGYTDGVIRVWGIG 301 (303)
Q Consensus 287 ~~gs~Dg~v~~w~~~ 301 (303)
++|+.||+|++|++.
T Consensus 232 as~s~D~~v~iw~~~ 246 (316)
T 3bg1_A 232 ASCSQDGRVFIWTCD 246 (316)
T ss_dssp EEEETTCEEEEEECS
T ss_pred EEEcCCCeEEEEEcc
Confidence 999999999999874
No 85
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=3.5e-31 Score=228.20 Aligned_cols=233 Identities=16% Similarity=0.187 Sum_probs=159.2
Q ss_pred CCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEee--------CCCEE
Q 048118 25 IDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSI--------DNRQI 96 (303)
Q Consensus 25 ~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~--------~~~~l 96 (303)
+....++++|+.|++|++|+....+...... -..+.+|++.|++++|+| ++++|
T Consensus 98 ~~~~~~las~~~d~~v~lw~~~~~~~~~~~~------------------~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~l 159 (393)
T 4gq1_A 98 PVYSLFLACVCQDNTVRLIITKNETIITQHV------------------LGGKSGHHNFVNDIDIADVYSADNRLAEQVI 159 (393)
T ss_dssp CEEEEEEEEEETTSCEEEEEEETTEEEEEEE------------------ECTTTSCSSCEEEEEEEEEECTTCSEEEEEE
T ss_pred CCCCCEEEEEeCCCcEEEEECCCCccceeee------------------ecccCCCCCceEEEEEccccccccCCCCCEE
Confidence 3345789999999999999986543211111 124568999999999998 78899
Q ss_pred EEEeCCCcEEEEecCCce-eeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEE-----------
Q 048118 97 VSASRDRTIKLWNTLGEC-KYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRAT----------- 164 (303)
Q Consensus 97 ~t~~~d~~i~vw~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~----------- 164 (303)
++++.|++|+|||+.... .... ..|...+.+++|+|++ ...+++++.|+.|++||+++++....
T Consensus 160 as~s~D~tv~~Wd~~~~~~~~~~---~~~~~~v~~v~~~p~~-~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~ 235 (393)
T 4gq1_A 160 ASVGDDCTLIIWRLTDEGPILAG---YPLSSPGISVQFRPSN-PNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPW 235 (393)
T ss_dssp EEEETTSEEEEEEEETTEEEEEE---EECSSCEEEEEEETTE-EEEEEEEETTSEEEEEETTCCC----------CSCCC
T ss_pred EEEECCCeEEEEECCCCceeeee---cCCCCCcEEEEECCCC-CceEEecCCCCEEEEEECCCCcccccccccCCcccce
Confidence 999999999999985432 2222 2466779999999975 24799999999999999987643221
Q ss_pred --------------EcCCCCCeeEEEEC-CCCCEEEEEeCCCeEEEEeCCCCceEEEecC-CCeEE--------------
Q 048118 165 --------------LAGHTGYVNTVAVS-PDGSLCASGGKDGVILLWDLAEGKRLYSLDA-GAVIH-------------- 214 (303)
Q Consensus 165 --------------~~~~~~~i~~~~~~-~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~-~~~v~-------------- 214 (303)
..+|...+.++.|+ |+++.|++++.|+++++||+..++....+.. ...+.
T Consensus 236 ~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 315 (393)
T 4gq1_A 236 LLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLF 315 (393)
T ss_dssp SEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSS
T ss_pred EEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEcccccccccc
Confidence 23567788899886 7999999999999999999987654433211 11111
Q ss_pred ----EEEEcC--CCeEEEEE-cCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEE
Q 048118 215 ----ALCFSP--NRYWLCAA-TEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLF 287 (303)
Q Consensus 215 ----~~~~s~--~~~~l~~~-~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~ 287 (303)
...|+| ++.+++++ .|+.|++||+.+++..... ..+...+.+++|+|||++||
T Consensus 316 ~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~--------------------~~~~~~V~svafspdG~~LA 375 (393)
T 4gq1_A 316 PSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIP--------------------IQLGMPIVDFCWHQDGSHLA 375 (393)
T ss_dssp CCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEE--------------------EECSSCEEEEEECTTSSEEE
T ss_pred CcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEe--------------------cCCCCcEEEEEEcCCCCEEE
Confidence 123333 34555555 5899999999887654322 12334578999999999999
Q ss_pred EeecCCeEEEEec
Q 048118 288 SGYTDGVIRVWGI 300 (303)
Q Consensus 288 ~gs~Dg~v~~w~~ 300 (303)
+++.||.+ +|.+
T Consensus 376 ~as~~Gv~-lvrL 387 (393)
T 4gq1_A 376 IATEGSVL-LTRL 387 (393)
T ss_dssp EEESSEEE-EEEE
T ss_pred EEeCCCeE-EEEE
Confidence 99987753 4443
No 86
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.98 E-value=5.9e-30 Score=232.06 Aligned_cols=249 Identities=17% Similarity=0.231 Sum_probs=196.8
Q ss_pred ccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCC-EEEEEE
Q 048118 11 MRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKD-VLSVAF 89 (303)
Q Consensus 11 ~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~-i~~i~~ 89 (303)
-..|.+.|++++|+|++ ++|++++ |+.|++|++....... ... ..+.+|.+. |.+++|
T Consensus 14 ~~~~~~~v~~~~~spdg-~~l~~~~-~~~v~v~~~~~~~~~~-~~~------------------~~~~~h~~~~v~~~~~ 72 (615)
T 1pgu_A 14 PSTQRNFTTHLSYDPTT-NAIAYPC-GKSAFVRCLDDGDSKV-PPV------------------VQFTGHGSSVVTTVKF 72 (615)
T ss_dssp CCCCTTCCCCCEEETTT-TEEEEEE-TTEEEEEECCSSCCSS-CSE------------------EEECTTTTSCEEEEEE
T ss_pred CCCccCceeEEEECCCC-CEEEEec-CCeEEEEECCCCCCcc-ccc------------------eEEecCCCceEEEEEE
Confidence 35688899999999975 5788887 7899999987431000 001 135678999 999999
Q ss_pred ee--CCCEEEEEeCCCcEEEEecCCc------eeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCC----CcEEEEECC
Q 048118 90 SI--DNRQIVSASRDRTIKLWNTLGE------CKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWD----RTVKVWNLS 157 (303)
Q Consensus 90 ~~--~~~~l~t~~~d~~i~vw~~~~~------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d----g~i~iwd~~ 157 (303)
+| ++++|++++.|+.|++|++... ..........|...|.+++|+|++ ..+++++.+ +.|++||
T Consensus 73 sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~--~~l~~~~~~~~~~~~v~~~d-- 148 (615)
T 1pgu_A 73 SPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEG--RRLCVVGEGRDNFGVFISWD-- 148 (615)
T ss_dssp CSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTS--SEEEEEECCSSCSEEEEETT--
T ss_pred CcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCC--CEEEEeccCCCCccEEEEEE--
Confidence 99 9999999999999999998422 122222334577889999999986 478888877 6888888
Q ss_pred CceeEEEEcCCCCCeeEEEECCCCC-EEEEEeCCCeEEEEeCCCCceEEEecC-CC---eEEEEEEcCC-CeEEE-EEcC
Q 048118 158 NCKLRATLAGHTGYVNTVAVSPDGS-LCASGGKDGVILLWDLAEGKRLYSLDA-GA---VIHALCFSPN-RYWLC-AATE 230 (303)
Q Consensus 158 ~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~-~~---~v~~~~~s~~-~~~l~-~~~~ 230 (303)
.++....+.+|...|++++|+|+++ .+++++.|+.|++||+.+++.+..+.. .. .+.+++|+|+ +.+++ ++.+
T Consensus 149 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 228 (615)
T 1pgu_A 149 SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSD 228 (615)
T ss_dssp TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETT
T ss_pred CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCC
Confidence 5567788899999999999999998 899999999999999999988887763 45 7999999999 87665 5569
Q ss_pred CcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEecc
Q 048118 231 QSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 231 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~ 301 (303)
+.|++||+++++.+..+... ...+...+.+++|+ ++.+|++++.||.|++||+.
T Consensus 229 g~i~vwd~~~~~~~~~~~~~----------------~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~ 282 (615)
T 1pgu_A 229 RKISCFDGKSGEFLKYIEDD----------------QEPVQGGIFALSWL-DSQKFATVGADATIRVWDVT 282 (615)
T ss_dssp CCEEEEETTTCCEEEECCBT----------------TBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETT
T ss_pred CeEEEEECCCCCEeEEeccc----------------ccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECC
Confidence 99999999988766543100 00234457889999 99999999999999999985
No 87
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.98 E-value=2e-30 Score=222.53 Aligned_cols=215 Identities=21% Similarity=0.375 Sum_probs=172.7
Q ss_pred ecccccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEE
Q 048118 7 LKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLS 86 (303)
Q Consensus 7 ~~~~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~ 86 (303)
+...+.+|.+.|.++.|.|+++.+|+||+.|++|++||+...... ..+. .....+|...|.+
T Consensus 149 ~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~-----~~~~-------------~~~~~~h~~~v~~ 210 (380)
T 3iz6_a 149 VSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRI-----SIFG-------------SEFPSGHTADVLS 210 (380)
T ss_dssp TCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEE-----EEEC-------------CCSSSSCCSCEEE
T ss_pred ceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEE-----EEee-------------cccCCCCccCeEE
Confidence 345688999999999999987778999999999999998754321 1110 0112468899999
Q ss_pred EEEee-CCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEEE
Q 048118 87 VAFSI-DNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATL 165 (303)
Q Consensus 87 i~~~~-~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~ 165 (303)
++|++ ++.+|++|+.|+.|++||+..... .......|...|.+++|+|++ ..+++++.|+.|++||+++++....+
T Consensus 211 ~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~-~~~~~~~h~~~v~~v~~~p~~--~~l~s~s~D~~i~lwd~~~~~~~~~~ 287 (380)
T 3iz6_a 211 LSINSLNANMFISGSCDTTVRLWDLRITSR-AVRTYHGHEGDINSVKFFPDG--QRFGTGSDDGTCRLFDMRTGHQLQVY 287 (380)
T ss_dssp EEECSSSCCEEEEEETTSCEEEEETTTTCC-CCEEECCCSSCCCEEEECTTS--SEEEEECSSSCEEEEETTTTEEEEEE
T ss_pred EEeecCCCCEEEEEECCCeEEEEECCCCCc-ceEEECCcCCCeEEEEEecCC--CeEEEEcCCCeEEEEECCCCcEEEEe
Confidence 99987 788999999999999999853211 122234688899999999986 57999999999999999998887777
Q ss_pred cCCC-------CCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEe-----cCCCeEEEEEEcCCCeEEEEE-cCCc
Q 048118 166 AGHT-------GYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL-----DAGAVIHALCFSPNRYWLCAA-TEQS 232 (303)
Q Consensus 166 ~~~~-------~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~-----~~~~~v~~~~~s~~~~~l~~~-~~~~ 232 (303)
..+. ..|++++|+|++++|++|+.||.|++||+..++.+..+ .+...|.+++|+|++.+|+++ .|+.
T Consensus 288 ~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~ 367 (380)
T 3iz6_a 288 NREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKN 367 (380)
T ss_dssp CCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSC
T ss_pred cccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCC
Confidence 5543 24899999999999999999999999999988877665 245689999999998776654 6999
Q ss_pred EEEEeCCCCc
Q 048118 233 IKIWDLESKS 242 (303)
Q Consensus 233 i~iwd~~~~~ 242 (303)
|++|++...+
T Consensus 368 i~iW~~~~~~ 377 (380)
T 3iz6_a 368 LKIWAFSGHR 377 (380)
T ss_dssp EEEEECCSSS
T ss_pred EEEEecCCCc
Confidence 9999987653
No 88
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.98 E-value=7.9e-30 Score=222.57 Aligned_cols=204 Identities=29% Similarity=0.467 Sum_probs=156.5
Q ss_pred eecccCCEEEEEEeeCCCEEEEEeCCCcEEEEecCCceee-eeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEE
Q 048118 77 FVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKY-TIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWN 155 (303)
Q Consensus 77 ~~~h~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd 155 (303)
+.+|.+.|.+++|+ +.++++|+.|+.|++||....... .......|...|.+++|+. ..+++++.||.|++||
T Consensus 209 ~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~l~s~~~dg~i~vwd 282 (435)
T 1p22_A 209 LIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD----KYIVSASGDRTIKVWN 282 (435)
T ss_dssp ECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEET----TEEEEEETTSEEEEEE
T ss_pred EcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCC----CEEEEEeCCCeEEEEE
Confidence 44788899999997 459999999999999998653322 1123346788899999943 4799999999999999
Q ss_pred CCCceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEec-CCCeEEEEEEcCCCeEEEEEcCCcEE
Q 048118 156 LSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLD-AGAVIHALCFSPNRYWLCAATEQSIK 234 (303)
Q Consensus 156 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~i~ 234 (303)
+++++....+.+|...|.++.++ ++++++|+.||.|++||+++++.+..+. ....+.+++|+ ...+++++.||.|+
T Consensus 283 ~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~-~~~l~sg~~dg~i~ 359 (435)
T 1p22_A 283 TSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD-NKRIVSGAYDGKIK 359 (435)
T ss_dssp TTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEECC-SSEEEEEETTSCEE
T ss_pred CCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEec-CCEEEEEeCCCcEE
Confidence 99999999999999999999984 6899999999999999999999888876 45789999983 34566677899999
Q ss_pred EEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEeccc
Q 048118 235 IWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIGR 302 (303)
Q Consensus 235 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~~ 302 (303)
+||+++++.... .........+..+...+.+++| ++.+|++|+.||.|++||+..
T Consensus 360 vwd~~~~~~~~~-----------~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~ 414 (435)
T 1p22_A 360 VWDLVAALDPRA-----------PAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLN 414 (435)
T ss_dssp EEEHHHHTSTTS-----------CTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC---
T ss_pred EEECCCCCCccc-----------cccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCC
Confidence 999865431100 0000012233445556677888 778999999999999999853
No 89
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.97 E-value=2.3e-30 Score=226.02 Aligned_cols=207 Identities=19% Similarity=0.287 Sum_probs=162.0
Q ss_pred eecccCCEEEEEEee-CCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEE
Q 048118 77 FVGHTKDVLSVAFSI-DNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWN 155 (303)
Q Consensus 77 ~~~h~~~i~~i~~~~-~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd 155 (303)
..+|...|++++|+| ++.+||+|+.||.|+|||+.............|...|.+++|+|.. ...|++++.||+|++||
T Consensus 115 ~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~-~~~l~s~s~D~~v~iwd 193 (435)
T 4e54_B 115 AAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLN-TNQFYASSMEGTTRLQD 193 (435)
T ss_dssp EEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSC-TTEEEEECSSSCEEEEE
T ss_pred CCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCC-CCEEEEEeCCCEEEEee
Confidence 356888999999999 4679999999999999998654433344445788999999999853 25899999999999999
Q ss_pred CCCceeEEEEcCC--CCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEec-CCCeEEEEEEcCCCe-EE-EEEcC
Q 048118 156 LSNCKLRATLAGH--TGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLD-AGAVIHALCFSPNRY-WL-CAATE 230 (303)
Q Consensus 156 ~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~-~l-~~~~~ 230 (303)
++++........+ ...+.+++|+|++++|++|+.||.|++||++.. .+..+. +...|.+++|+|++. ++ +++.|
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~-~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d 272 (435)
T 4e54_B 194 FKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK-ELWNLRMHKKKVTHVALNPCCDWFLATASVD 272 (435)
T ss_dssp TTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC-BCCCSBCCSSCEEEEEECTTCSSEEEEEETT
T ss_pred ccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc-eeEEEecccceEEeeeecCCCceEEEEecCc
Confidence 9876554433333 345788999999999999999999999998754 444443 467899999999863 44 45679
Q ss_pred CcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEeccc
Q 048118 231 QSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIGR 302 (303)
Q Consensus 231 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~~ 302 (303)
+.|++||+++.+....+. ....|...+++++|+|++.+|++|+.||.|++||+..
T Consensus 273 ~~v~iwd~~~~~~~~~~~-----------------~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~ 327 (435)
T 4e54_B 273 QTVKIWDLRQVRGKASFL-----------------YSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQ 327 (435)
T ss_dssp SBCCEEETTTCCSSSCCS-----------------BCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSS
T ss_pred ceeeEEecccccccceEE-----------------EeeeccccccceeECCCCCeeEEEcCCCEEEEEECCC
Confidence 999999998765332211 1123455678899999999999999999999999853
No 90
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=7.4e-29 Score=216.43 Aligned_cols=231 Identities=26% Similarity=0.472 Sum_probs=186.0
Q ss_pred cccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEee
Q 048118 12 RAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSI 91 (303)
Q Consensus 12 ~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~ 91 (303)
.+|...|+++.++ ++++++|+.|++|++||+...+. .. .+.+|.+.|.+++|
T Consensus 130 ~~~~~~v~~~~~d---~~~l~~g~~dg~i~iwd~~~~~~-----~~------------------~~~~h~~~v~~l~~-- 181 (435)
T 1p22_A 130 SETSKGVYCLQYD---DQKIVSGLRDNTIKIWDKNTLEC-----KR------------------ILTGHTGSVLCLQY-- 181 (435)
T ss_dssp CSSCCCEEEEECC---SSEEEEEESSSCEEEEESSSCCE-----EE------------------EECCCSSCEEEEEC--
T ss_pred cCCCCcEEEEEEC---CCEEEEEeCCCeEEEEeCCCCeE-----EE------------------EEcCCCCcEEEEEE--
Confidence 3566779999883 46899999999999999864321 11 24578889999988
Q ss_pred CCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeE---EEEcCC
Q 048118 92 DNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLR---ATLAGH 168 (303)
Q Consensus 92 ~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~---~~~~~~ 168 (303)
++.++++|+.|+.|++||...... ......|...|.+++|+++ .+++++.||.|++||+.+++.. ..+.+|
T Consensus 182 ~~~~l~sg~~dg~i~vwd~~~~~~--~~~~~~h~~~v~~l~~~~~----~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~ 255 (435)
T 1p22_A 182 DERVIITGSSDSTVRVWDVNTGEM--LNTLIHHCEAVLHLRFNNG----MMVTCSKDRSIAVWDMASPTDITLRRVLVGH 255 (435)
T ss_dssp CSSEEEEEETTSCEEEEESSSCCE--EEEECCCCSCEEEEECCTT----EEEEEETTSCEEEEECSSSSCCEEEEEECCC
T ss_pred CCCEEEEEcCCCeEEEEECCCCcE--EEEEcCCCCcEEEEEEcCC----EEEEeeCCCcEEEEeCCCCCCceeeeEecCC
Confidence 788999999999999999865432 2223467888999999753 7999999999999999876543 667889
Q ss_pred CCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEec-CCCeEEEEEEcCCCeEEEEEcCCcEEEEeCCCCceeeee
Q 048118 169 TGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLD-AGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDL 247 (303)
Q Consensus 169 ~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~ 247 (303)
...|.++++ +++++++|+.||.|++||+++++.+..+. ....+.+++|+ +..+++++.|+.|++||+++++.+..+
T Consensus 256 ~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~g~~dg~i~iwd~~~~~~~~~~ 332 (435)
T 1p22_A 256 RAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGACLRVL 332 (435)
T ss_dssp SSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE-TTEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred CCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC-CCEEEEEeCCCeEEEEECCCCCEEEEE
Confidence 999999999 67899999999999999999999888875 45678999985 356667778999999999988766543
Q ss_pred eeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEecc
Q 048118 248 KVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~ 301 (303)
. .+...+.+++| ++.+|++|+.||.|++||+.
T Consensus 333 ~--------------------~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~ 364 (435)
T 1p22_A 333 E--------------------GHEELVRCIRF--DNKRIVSGAYDGKIKVWDLV 364 (435)
T ss_dssp C--------------------CCSSCEEEEEC--CSSEEEEEETTSCEEEEEHH
T ss_pred e--------------------CCcCcEEEEEe--cCCEEEEEeCCCcEEEEECC
Confidence 2 23445667777 78899999999999999973
No 91
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.2e-29 Score=214.89 Aligned_cols=210 Identities=21% Similarity=0.320 Sum_probs=169.7
Q ss_pred ceecccCCEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEE
Q 048118 76 QFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWN 155 (303)
Q Consensus 76 ~~~~h~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd 155 (303)
.+.+|.+.|.+++|+|++.+|++++.|+.|++|++.............|...|.+++|+|+.....+++++.||.|++||
T Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd 85 (379)
T 3jrp_A 6 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK 85 (379)
T ss_dssp CEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred EecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEE
Confidence 45689999999999999999999999999999998643333334445688899999998763235899999999999999
Q ss_pred CCCce--eEEEEcCCCCCeeEEEECCC--CCEEEEEeCCCeEEEEeCCCCceE--EE-ecCCCeEEEEEEcC--------
Q 048118 156 LSNCK--LRATLAGHTGYVNTVAVSPD--GSLCASGGKDGVILLWDLAEGKRL--YS-LDAGAVIHALCFSP-------- 220 (303)
Q Consensus 156 ~~~~~--~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~v~iwd~~~~~~~--~~-~~~~~~v~~~~~s~-------- 220 (303)
+.+++ ....+..|...|.+++|+|+ +++|++++.|+.|++||++.+... .. ......+.+++|+|
T Consensus 86 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 165 (379)
T 3jrp_A 86 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGE 165 (379)
T ss_dssp EETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC------
T ss_pred cCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcccccccc
Confidence 98886 66778889999999999999 999999999999999999877432 22 24567899999999
Q ss_pred -----CCe-EEEEEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCC---CCEEEEeec
Q 048118 221 -----NRY-WLCAATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVD---GSTLFSGYT 291 (303)
Q Consensus 221 -----~~~-~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~---~~~l~~gs~ 291 (303)
++. +++++.|+.|++||+++++..... ...+..+...+.+++|+|+ +.+|++|+.
T Consensus 166 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~----------------~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~ 229 (379)
T 3jrp_A 166 HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVL----------------ESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ 229 (379)
T ss_dssp ----CTTCEEEEEETTSCEEEEEEETTTTEEEE----------------EEEECCCSSCEEEEEECCCCSSSEEEEEEET
T ss_pred ccCCCCCCEEEEEeCCCeEEEEEecCCCcceee----------------EEEEecccCcEeEEEECCCCCCCCeEEEEeC
Confidence 455 555667999999999765432211 1123445566789999999 899999999
Q ss_pred CCeEEEEecc
Q 048118 292 DGVIRVWGIG 301 (303)
Q Consensus 292 Dg~v~~w~~~ 301 (303)
||.|++||+.
T Consensus 230 dg~i~iwd~~ 239 (379)
T 3jrp_A 230 DRTCIIWTQD 239 (379)
T ss_dssp TSCEEEEEES
T ss_pred CCEEEEEeCC
Confidence 9999999985
No 92
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.7e-29 Score=221.40 Aligned_cols=278 Identities=10% Similarity=0.125 Sum_probs=191.6
Q ss_pred cceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEE---------------------------
Q 048118 16 DMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQD--------------------------- 68 (303)
Q Consensus 16 ~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~--------------------------- 68 (303)
.+++++.|+|++. +++++ .++.|++|++..+++.. .......+......
T Consensus 5 ~p~~~v~~s~dg~-~l~~~-~~~~i~v~d~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (450)
T 2vdu_B 5 HPLQNLLTSRDGS-LVFAI-IKNCILSFKYQSPNHWE--FAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNK 80 (450)
T ss_dssp CCCCEEEECSSSS-EEEEE-ETTEEEEEEEETTTEEE--EEEEEECCC--------------------------------
T ss_pred ccEEEEEecCCCC-EEEEE-eCCeEEEEECCCCCcce--eeeecCCccccccccccccchhhccccccccccccccccCc
Confidence 4789999998864 55544 57899999987654110 11111111100000
Q ss_pred ---------EEeCCCCceecccCCEEEEEEeeCCCEE-EEEeCCCcEEEEecC--CceeeeeecCCCCccceEEEEEcCC
Q 048118 69 ---------VVLSSDGQFVGHTKDVLSVAFSIDNRQI-VSASRDRTIKLWNTL--GECKYTIQEGDAHTEWVSCVRFSPN 136 (303)
Q Consensus 69 ---------~~~~~~~~~~~h~~~i~~i~~~~~~~~l-~t~~~d~~i~vw~~~--~~~~~~~~~~~~~~~~i~~~~~~~~ 136 (303)
....+.....+|.+.|.+++|+|++.+| ++++.|+.|++|++. ............+...|.+++|+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~ 160 (450)
T 2vdu_B 81 GDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAED 160 (450)
T ss_dssp -------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTT
T ss_pred CccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCC
Confidence 0001111234677789999999999996 899999999999986 3322222111234567999999998
Q ss_pred CCCCEEEEEeCCCcEEEEECCCceeEE----EEcCCCCCeeEEEECCC---CCEEEEEeCCCeEEEEeCCCCceEEEe--
Q 048118 137 TLQPTIVSASWDRTVKVWNLSNCKLRA----TLAGHTGYVNTVAVSPD---GSLCASGGKDGVILLWDLAEGKRLYSL-- 207 (303)
Q Consensus 137 ~~~~~~~~~~~dg~i~iwd~~~~~~~~----~~~~~~~~i~~~~~~~~---~~~l~~~~~d~~v~iwd~~~~~~~~~~-- 207 (303)
+ ..+++++.+|.+++|++.+.+... .+.+|...|++++|+|+ +++|++++.|++|++||+++++.+..+
T Consensus 161 ~--~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~ 238 (450)
T 2vdu_B 161 D--TTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLF 238 (450)
T ss_dssp S--SEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECC
T ss_pred C--CEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeec
Confidence 6 579999999999999998765433 66789999999999999 899999999999999999998887764
Q ss_pred cCCCeEEEEEEcCCCeEE-EEEcCCcEEEEeCCCCceeeeeeeccccccccccC--cc---ceeeccccceeEEEEEEcC
Q 048118 208 DAGAVIHALCFSPNRYWL-CAATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEA--TT---ATTTIKKKNIYCTSLNWSV 281 (303)
Q Consensus 208 ~~~~~v~~~~~s~~~~~l-~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~sp 281 (303)
.....|.+++|+ ++.++ +++.|+.|++||+++++.+..+............. .. ...........+..++|+|
T Consensus 239 ~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~ 317 (450)
T 2vdu_B 239 GHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSK 317 (450)
T ss_dssp CCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECS
T ss_pred CCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeC
Confidence 356789999999 87655 55679999999999998877665321000000000 00 0000012234568899999
Q ss_pred CCCEEEEee-cCCeEEEEec
Q 048118 282 DGSTLFSGY-TDGVIRVWGI 300 (303)
Q Consensus 282 ~~~~l~~gs-~Dg~v~~w~~ 300 (303)
++++|++++ .|+.|++|++
T Consensus 318 ~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 318 NLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp SSSEEEEEETTCSEEEEEEE
T ss_pred CCCEEEEEECCCCeEEEEEe
Confidence 999999999 9999999998
No 93
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=2.4e-28 Score=213.74 Aligned_cols=256 Identities=25% Similarity=0.464 Sum_probs=200.5
Q ss_pred cccccccccce-eeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCC--------C---
Q 048118 8 KGTMRAHTDMV-TAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSD--------G--- 75 (303)
Q Consensus 8 ~~~~~~h~~~v-~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--------~--- 75 (303)
...+.+|.+.| +++.++ ++++++|+.|++|++|++.... ....+.+|...|.++.++++ +
T Consensus 111 ~~~l~~h~~~v~~~~~~~---g~~l~sg~~dg~i~vwd~~~~~-----~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~i~ 182 (445)
T 2ovr_B 111 PKVLKGHDDHVITCLQFC---GNRIVSGSDDNTLKVWSAVTGK-----CLRTLVGHTGGVWSSQMRDNIIISGSTDRTLK 182 (445)
T ss_dssp CEEEECSTTSCEEEEEEE---TTEEEEEETTSCEEEEETTTCC-----EEEECCCCSSCEEEEEEETTEEEEEETTSCEE
T ss_pred eEEecccCCCcEEEEEEc---CCEEEEEECCCcEEEEECCCCc-----EEEEEcCCCCCEEEEEecCCEEEEEeCCCeEE
Confidence 44688998874 666653 4689999999999999986543 34556678888877766532 1
Q ss_pred -----------ceecccCCEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEE
Q 048118 76 -----------QFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVS 144 (303)
Q Consensus 76 -----------~~~~h~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 144 (303)
.+.+|...|.+++|+ +..+++++.|+.|++||....... .....|...+.+++++. ..+++
T Consensus 183 vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~--~~~~~~~~~v~~~~~~~----~~l~~ 254 (445)
T 2ovr_B 183 VWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCL--HVLMGHVAAVRCVQYDG----RRVVS 254 (445)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEE--EEEECCSSCEEEEEECS----SCEEE
T ss_pred EEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEE--EEEcCCcccEEEEEECC----CEEEE
Confidence 245799999999985 568999999999999998653322 22235778899999943 36899
Q ss_pred EeCCCcEEEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEecC-CCeEEEEEEcCCCe
Q 048118 145 ASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDA-GAVIHALCFSPNRY 223 (303)
Q Consensus 145 ~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~-~~~v~~~~~s~~~~ 223 (303)
++.||.|++||+++++....+.+|...|.++.+ ++.++++++.|+.|++||+++++.+..+.. ...+.++.+++ ..
T Consensus 255 ~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-~~ 331 (445)
T 2ovr_B 255 GAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD-NI 331 (445)
T ss_dssp EETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEET-TE
T ss_pred EcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEeC-CE
Confidence 999999999999999999999999999999999 688999999999999999999998887753 46777887753 45
Q ss_pred EEEEEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEecc
Q 048118 224 WLCAATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 224 ~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~ 301 (303)
+++++.|+.|++||+++++.+..+... ..+...+.+++|+ +.+|++|+.||.|++||+.
T Consensus 332 l~~~~~dg~i~vwd~~~~~~~~~~~~~-----------------~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~ 390 (445)
T 2ovr_B 332 LVSGNADSTVKIWDIKTGQCLQTLQGP-----------------NKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLK 390 (445)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECST-----------------TSCSSCEEEEEEC--SSEEEEEETTSEEEEEETT
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEccC-----------------CCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECC
Confidence 666778999999999988776554321 1133456778885 5799999999999999975
No 94
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=2.6e-29 Score=213.58 Aligned_cols=263 Identities=10% Similarity=0.135 Sum_probs=172.3
Q ss_pred ccccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEE
Q 048118 9 GTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVA 88 (303)
Q Consensus 9 ~~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~ 88 (303)
.++.+|.+.|++++|+|++ .+|++|+.| .+++|+........ ..+...+..++
T Consensus 13 ~~~~~h~~~V~~v~fs~dg-~~la~g~~~-~~~iw~~~~~~~~~-------------------------~~~~~~~~~~~ 65 (355)
T 3vu4_A 13 VPENHVSNPVTDYEFNQDQ-SCLILSTLK-SFEIYNVHPVAHIM-------------------------SQEMRHLSKVR 65 (355)
T ss_dssp ------CCCCCEEEECTTS-SEEEEECSS-EEEEEEETTEEEEE-------------------------EEECSCCCEEE
T ss_pred cccccCCCceEEEEECCCC-CEEEEEcCC-EEEEEecCCcceee-------------------------eeecCCeEEEE
Confidence 3568899999999999975 588888776 47899976432110 01112355677
Q ss_pred EeeCCCEE-EEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCC---------------C-------------
Q 048118 89 FSIDNRQI-VSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTL---------------Q------------- 139 (303)
Q Consensus 89 ~~~~~~~l-~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---------------~------------- 139 (303)
+.+++..+ ++++.|+.|++||........... +...|.+++++++.. .
T Consensus 66 ~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~---~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~ 142 (355)
T 3vu4_A 66 MLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK---VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGV 142 (355)
T ss_dssp ECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE---CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEE
T ss_pred EcCCCCEEEEEECCccEEEEEECCCCcEEEEEE---CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCce
Confidence 77777765 567778899999975432221111 233466666655310 0
Q ss_pred -----CEEEE--EeCCCcEEEEECCCce----------------eEEEEcCCCCCeeEEEECCCCCEEEEEeCCCe-EEE
Q 048118 140 -----PTIVS--ASWDRTVKVWNLSNCK----------------LRATLAGHTGYVNTVAVSPDGSLCASGGKDGV-ILL 195 (303)
Q Consensus 140 -----~~~~~--~~~dg~i~iwd~~~~~----------------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~-v~i 195 (303)
..++. |+.+|.|++||+.+++ ....+.+|.+.|++++|+|++++|++|+.|++ |++
T Consensus 143 ~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~i 222 (355)
T 3vu4_A 143 CEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRV 222 (355)
T ss_dssp EEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEE
T ss_pred EEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEE
Confidence 12333 5789999999998754 26778999999999999999999999999998 999
Q ss_pred EeCCCCceEEEec---CCCeEEEEEEcCCCeEEEE-EcCCcEEEEeCCCCceeeeeeecc--ccccccccCccceeeccc
Q 048118 196 WDLAEGKRLYSLD---AGAVIHALCFSPNRYWLCA-ATEQSIKIWDLESKSIVEDLKVDL--KTEAEKSEATTATTTIKK 269 (303)
Q Consensus 196 wd~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~~-~~~~~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 269 (303)
||+++++.+..+. +...|.+++|+|++.++++ +.|+.|++||++.....+...+.. .+.............+..
T Consensus 223 wd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (355)
T 3vu4_A 223 FKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSV 302 (355)
T ss_dssp EETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCC
T ss_pred EECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEecc
Confidence 9999999998886 5788999999999876654 568999999997654322111100 000000000000000110
Q ss_pred -cceeEEEEEEcCCCCEEEEeecCCeEEEEecc
Q 048118 270 -KNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 270 -~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~ 301 (303)
.......++|+|++++|++++.||.+++|++.
T Consensus 303 ~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~ 335 (355)
T 3vu4_A 303 DKHVRGCKIAWISESSLVVVWPHTRMIETFKVV 335 (355)
T ss_dssp CTTCCCCEEEESSSSEEEEEETTTTEEEEEEEE
T ss_pred CCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEE
Confidence 11111348999999999999999999999874
No 95
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.97 E-value=2.7e-29 Score=231.51 Aligned_cols=204 Identities=29% Similarity=0.460 Sum_probs=168.9
Q ss_pred ceecccCCEEEEEEeeCC-CEEEEEeCCCcEEEEecCCcee---eeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcE
Q 048118 76 QFVGHTKDVLSVAFSIDN-RQIVSASRDRTIKLWNTLGECK---YTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTV 151 (303)
Q Consensus 76 ~~~~h~~~i~~i~~~~~~-~~l~t~~~d~~i~vw~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i 151 (303)
.+.+|++.|++++|++++ .+|+||+.|+.|++|++..... ........|...|.+++|+|++ ..+++|+.|+.|
T Consensus 377 ~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g--~~l~sgs~Dg~v 454 (694)
T 3dm0_A 377 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDG--QFALSGSWDGEL 454 (694)
T ss_dssp EEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTS--SEEEEEETTSEE
T ss_pred hcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCC--CEEEEEeCCCcE
Confidence 367899999999999875 7899999999999999753211 1122234688899999999986 589999999999
Q ss_pred EEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEe----cCCCeEEEEEEcCCC---eE
Q 048118 152 KVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL----DAGAVIHALCFSPNR---YW 224 (303)
Q Consensus 152 ~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~----~~~~~v~~~~~s~~~---~~ 224 (303)
++||+.+++....+.+|...|.+++|+|++++|++++.|++|++||+......... .+...|.+++|+|++ .+
T Consensus 455 ~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l 534 (694)
T 3dm0_A 455 RLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTI 534 (694)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEE
T ss_pred EEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceE
Confidence 99999999999999999999999999999999999999999999998755433222 234579999999985 35
Q ss_pred EEEEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEecc
Q 048118 225 LCAATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 225 l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~ 301 (303)
++++.|+.|++||+++++.... +..|...+.+++|+|++++|++|+.||.|++||+.
T Consensus 535 ~s~s~d~~v~vwd~~~~~~~~~--------------------~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~ 591 (694)
T 3dm0_A 535 VSASWDKTVKVWNLSNCKLRST--------------------LAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLA 591 (694)
T ss_dssp EEEETTSCEEEEETTTCCEEEE--------------------ECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETT
T ss_pred EEEeCCCeEEEEECCCCcEEEE--------------------EcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECC
Confidence 6677899999999988765443 23455567899999999999999999999999984
No 96
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.5e-29 Score=236.02 Aligned_cols=257 Identities=11% Similarity=0.085 Sum_probs=187.1
Q ss_pred ccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEe
Q 048118 11 MRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFS 90 (303)
Q Consensus 11 ~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~ 90 (303)
..+|.+.|++++|+|++ .+||+|+.|++|++|+....+. .. ...|...|.+++|+
T Consensus 13 ~~gh~~~V~~lafspdg-~~lAsgs~Dg~I~lw~~~~~~~-----~~-------------------~~~~~~~V~~l~fs 67 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQ-NLLAIATVTGEVHIYGQQQVEV-----VI-------------------KLEDRSAIKEMRFV 67 (902)
T ss_dssp EEECSSCEEEEEEETTT-TEEEEEETTSEEEEECSTTCEE-----EE-------------------ECSSCCCEEEEEEE
T ss_pred ccCCCCCcEEEEECCCC-CEEEEEeCCCEEEEEeCCCcEE-----EE-------------------EcCCCCCEEEEEEc
Confidence 45899999999999975 6999999999999998753211 00 12367789999999
Q ss_pred eCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeE--------
Q 048118 91 IDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLR-------- 162 (303)
Q Consensus 91 ~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~-------- 162 (303)
| +++|++++.|+.|++||+......... .+...|.+++|+|++ ..+++|+.||.|++||+.++++.
T Consensus 68 p-g~~L~S~s~D~~v~lWd~~~~~~~~~~---~~~~~V~~v~~sp~g--~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~ 141 (902)
T 2oaj_A 68 K-GIYLVVINAKDTVYVLSLYSQKVLTTV---FVPGKITSIDTDASL--DWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQ 141 (902)
T ss_dssp T-TTEEEEEETTCEEEEEETTTCSEEEEE---ECSSCEEEEECCTTC--SEEEEEETTSCEEEEETTTTEEEEEEECCHH
T ss_pred C-CCEEEEEECcCeEEEEECCCCcEEEEE---cCCCCEEEEEECCCC--CEEEEEcCCCcEEEEECCCCccccceecccc
Confidence 9 889999999999999998653322211 144679999999986 58999999999999999887753
Q ss_pred ---EEEcCCCCCeeEEEECCC-CCEEEEEeCCCeEEEEeCCCCceEEEecCC-------------------CeEEEEEEc
Q 048118 163 ---ATLAGHTGYVNTVAVSPD-GSLCASGGKDGVILLWDLAEGKRLYSLDAG-------------------AVIHALCFS 219 (303)
Q Consensus 163 ---~~~~~~~~~i~~~~~~~~-~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~-------------------~~v~~~~~s 219 (303)
..+.+|.+.|++++|+|+ +..|++|+.|++| +||+++++.+..+... ..|.+++|+
T Consensus 142 ~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fs 220 (902)
T 2oaj_A 142 KSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYH 220 (902)
T ss_dssp HHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEEC
T ss_pred ccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEc
Confidence 123568899999999996 4689999999999 9999999888776533 569999999
Q ss_pred CCCeEEE-EEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEc----CCC-CEEEEeecC-
Q 048118 220 PNRYWLC-AATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWS----VDG-STLFSGYTD- 292 (303)
Q Consensus 220 ~~~~~l~-~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s----p~~-~~l~~gs~D- 292 (303)
|++.+++ ++.|+.|++||+++++.+....+.......... ......+ .+...+.+++|+ |++ .+|++|+.|
T Consensus 221 pdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~-~~~~~~~-~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~ 298 (902)
T 2oaj_A 221 PNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQP-DYIRDSS-TNAAKISKVYWMCENNPEYTSLLISHKSIS 298 (902)
T ss_dssp TTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCT-TCCCCCS-SCCCEEEEEEEEECSSTTEEEEEEEEECST
T ss_pred CCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCC-cCCCCCc-cccCCeeEEEEEecCCCCCCEEEEeCCCCC
Confidence 9987665 556999999999988765421110000000000 0000000 123357889995 554 467788776
Q ss_pred ----CeEEEEecc
Q 048118 293 ----GVIRVWGIG 301 (303)
Q Consensus 293 ----g~v~~w~~~ 301 (303)
+.+++|+++
T Consensus 299 ~~~~~~v~~~~~~ 311 (902)
T 2oaj_A 299 RGDNQSLTMIDLG 311 (902)
T ss_dssp TSSCCCEEEEEEE
T ss_pred CCCCceEEEEecC
Confidence 378888853
No 97
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.2e-28 Score=215.97 Aligned_cols=250 Identities=17% Similarity=0.203 Sum_probs=185.3
Q ss_pred cccccceeeeecCCCCCcEEEEecCCCcEEEEEcc--cCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEE
Q 048118 12 RAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLT--KEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAF 89 (303)
Q Consensus 12 ~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~ 89 (303)
.+|.+.|++++|+|++..++++|+.|++|++|++. .... ...+. ...|...|.+++|
T Consensus 99 ~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~-----~~~~~----------------~~~~~~~v~~~~~ 157 (450)
T 2vdu_B 99 PPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNV-----LKLRK----------------RFCFSKRPNAISI 157 (450)
T ss_dssp -CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSC-----EEEEE----------------EEECSSCEEEEEE
T ss_pred CccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCce-----eeeee----------------cccCCCCceEEEE
Confidence 35677899999999865435999999999999986 3221 11110 1246688999999
Q ss_pred eeCCCEEEEEeCCCcEEEEecCCceee--eeecCCCCccceEEEEEcCC-CCCCEEEEEeCCCcEEEEECCCceeEEE-E
Q 048118 90 SIDNRQIVSASRDRTIKLWNTLGECKY--TIQEGDAHTEWVSCVRFSPN-TLQPTIVSASWDRTVKVWNLSNCKLRAT-L 165 (303)
Q Consensus 90 ~~~~~~l~t~~~d~~i~vw~~~~~~~~--~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~dg~i~iwd~~~~~~~~~-~ 165 (303)
+|++.+|++++.|+.|.+|++...... .......|...|.+++|+|+ .....+++++.|+.|++||+.+++.... +
T Consensus 158 sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~ 237 (450)
T 2vdu_B 158 AEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWL 237 (450)
T ss_dssp CTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEEC
T ss_pred cCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeee
Confidence 999999999999999999997543221 11122357788999999998 1125799999999999999998887766 5
Q ss_pred cCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEecC--------------------------CCeEEEEEEc
Q 048118 166 AGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDA--------------------------GAVIHALCFS 219 (303)
Q Consensus 166 ~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~--------------------------~~~v~~~~~s 219 (303)
.+|...|++++|+ ++++|++++.|++|++||+++++.+..+.. ...+..++|+
T Consensus 238 ~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~ 316 (450)
T 2vdu_B 238 FGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKS 316 (450)
T ss_dssp CCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEEC
T ss_pred cCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEe
Confidence 6899999999999 999999999999999999999987776641 2468899999
Q ss_pred CCCeEEEEE--cCCcEEEEeC--CCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeec----
Q 048118 220 PNRYWLCAA--TEQSIKIWDL--ESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYT---- 291 (303)
Q Consensus 220 ~~~~~l~~~--~~~~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~---- 291 (303)
|++.+++++ .++.|++|++ ..+..+..+. .+..+ ..+.+++|+|++.++++++.
T Consensus 317 ~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~-----------------~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~ 378 (450)
T 2vdu_B 317 KNLPFVAFFVEATKCIIILEMSEKQKGDLALKQ-----------------IITFP-YNVISLSAHNDEFQVTLDNKESSG 378 (450)
T ss_dssp SSSSEEEEEETTCSEEEEEEECSSSTTCEEEEE-----------------EEECS-SCEEEEEEETTEEEEEECCTTCCS
T ss_pred CCCCEEEEEECCCCeEEEEEeccCCCCceeecc-----------------EeccC-CceEEEEecCCcEEEEEecccCCC
Confidence 998766554 5899999999 4442211111 11112 34678999996545555553
Q ss_pred --CCeEEEEecc
Q 048118 292 --DGVIRVWGIG 301 (303)
Q Consensus 292 --Dg~v~~w~~~ 301 (303)
++.|.+|.+.
T Consensus 379 ~~~~~i~v~~~~ 390 (450)
T 2vdu_B 379 VQKNFAKFIEYN 390 (450)
T ss_dssp SCCCSEEEEEEE
T ss_pred CCCcceEEEEEE
Confidence 5668888764
No 98
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.97 E-value=1e-28 Score=208.10 Aligned_cols=232 Identities=12% Similarity=0.151 Sum_probs=183.4
Q ss_pred cccccccceeeeecCCCCCc-EEEEecCCCcEEEEEc-ccCccccceeeeeecCCCcceEEEEeCCCCceec--ccCCEE
Q 048118 10 TMRAHTDMVTAIATPIDNSD-MIVTASRDKSIIVWHL-TKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVG--HTKDVL 85 (303)
Q Consensus 10 ~~~~h~~~v~~v~~~~~~~~-~~~t~s~d~~i~iw~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--h~~~i~ 85 (303)
.+.+|...|++++|+|+ +. +|++|+.|+.|++|++ ..... ..+.+ |...|.
T Consensus 51 ~~~~~~~~v~~~~~~~~-~~~~l~~~~~dg~i~~wd~~~~~~~------------------------~~~~~~~~~~~v~ 105 (342)
T 1yfq_A 51 QSLRYKHPLLCCNFIDN-TDLQIYVGTVQGEILKVDLIGSPSF------------------------QALTNNEANLGIC 105 (342)
T ss_dssp EEEECSSCEEEEEEEES-SSEEEEEEETTSCEEEECSSSSSSE------------------------EECBSCCCCSCEE
T ss_pred eeeecCCceEEEEECCC-CCcEEEEEcCCCeEEEEEeccCCce------------------------EeccccCCCCceE
Confidence 45689999999999987 46 8999999999999998 64321 02345 889999
Q ss_pred EEEEeeCCCEEEEEeCCCcEEEEecCCc---e----eeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCC
Q 048118 86 SVAFSIDNRQIVSASRDRTIKLWNTLGE---C----KYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSN 158 (303)
Q Consensus 86 ~i~~~~~~~~l~t~~~d~~i~vw~~~~~---~----~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~ 158 (303)
+++|+| +.++++++.|+.|++||.... . ....... .+...+.+++|+|+. +++++.|+.|++||+++
T Consensus 106 ~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~----l~~~~~d~~i~i~d~~~ 179 (342)
T 1yfq_A 106 RICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNT-KVKNKIFTMDTNSSR----LIVGMNNSQVQWFRLPL 179 (342)
T ss_dssp EEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSS-SSCCCEEEEEECSSE----EEEEESTTEEEEEESSC
T ss_pred EEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEE-eeCCceEEEEecCCc----EEEEeCCCeEEEEECCc
Confidence 999999 999999999999999997430 0 1111122 267789999999863 88999999999999987
Q ss_pred -ce--eEEEEcCCCCCeeEEEECC-CCCEEEEEeCCCeEEEEeCCCC------ceEEEecC----------CCeEEEEEE
Q 048118 159 -CK--LRATLAGHTGYVNTVAVSP-DGSLCASGGKDGVILLWDLAEG------KRLYSLDA----------GAVIHALCF 218 (303)
Q Consensus 159 -~~--~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~v~iwd~~~~------~~~~~~~~----------~~~v~~~~~ 218 (303)
.. .......|...+.+++|+| +++++++++.||.+++|++... +.+..+.. ...+.+++|
T Consensus 180 ~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 259 (342)
T 1yfq_A 180 CEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEF 259 (342)
T ss_dssp CTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEE
T ss_pred cccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEE
Confidence 43 3344566788999999999 9999999999999999999876 55555532 238999999
Q ss_pred cCCCeEE-EEEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeecccc-ceeEEEEEEcCCCCEEEEeecCCe
Q 048118 219 SPNRYWL-CAATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKK-NIYCTSLNWSVDGSTLFSGYTDGV 294 (303)
Q Consensus 219 s~~~~~l-~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~sp~~~~l~~gs~Dg~ 294 (303)
+|++.++ +++.+|.|++||+++++.+..+. .+ ...+.+++ |++.+|++|+.||.
T Consensus 260 s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~--------------------~~h~~~v~~~~--~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 260 SPRHKFLYTAGSDGIISCWNLQTRKKIKNFA--------------------KFNEDSVVKIA--CSDNILCLATSDDT 315 (342)
T ss_dssp CTTTCCEEEEETTSCEEEEETTTTEEEEECC--------------------CCSSSEEEEEE--ECSSEEEEEEECTH
T ss_pred cCCCCEEEEecCCceEEEEcCccHhHhhhhh--------------------cccCCCceEec--CCCCeEEEEecCCc
Confidence 9998655 45668999999999887665432 22 34566777 99999999999998
No 99
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=1.4e-28 Score=202.79 Aligned_cols=258 Identities=16% Similarity=0.132 Sum_probs=166.6
Q ss_pred eeeeecCCC-CC-cEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCc-ee------cccCCEEEEE
Q 048118 18 VTAIATPID-NS-DMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQ-FV------GHTKDVLSVA 88 (303)
Q Consensus 18 v~~v~~~~~-~~-~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~------~h~~~i~~i~ 88 (303)
+.++-|... .. --++++++ .+|++|+..... .-.+......+..+|..+.+.|+.. +. -+...|..++
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla 118 (356)
T 2w18_A 42 VSAMFWERAGCKEPCIITACE-DVVSLWKALDAW--QWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALF 118 (356)
T ss_dssp EEEEEEC----CEEEEEEEES-SEEEEEEESSSS--BEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEEC
T ss_pred EeeeeeccCCCCccEEEEecc-ceEEEcccCCCc--cceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEE
Confidence 445555443 22 24666665 599999987641 1234555666676777776666432 10 1334566666
Q ss_pred EeeC----CCEEEEEe--------------------CCCcEEEEecCCceeeeeecCCCCccceEEEEEcC-CCCCCEEE
Q 048118 89 FSID----NRQIVSAS--------------------RDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSP-NTLQPTIV 143 (303)
Q Consensus 89 ~~~~----~~~l~t~~--------------------~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~ 143 (303)
++|+ +.++++++ .|+.|++|++....+. ......|...+..++|+| ++.+..++
T Consensus 119 ~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~-~~s~~~~~~~v~~l~fs~~~g~~~~La 197 (356)
T 2w18_A 119 CSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGG-KENQFLMPPEETILTFAEVQGMQEALL 197 (356)
T ss_dssp C------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCE-EEEEEECCCSSCEEEEEEEETSTTEEE
T ss_pred ECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCce-eeeeccCCCceeeEEeeccCCCCceEE
Confidence 6666 55555544 3777888877332111 111124555667778887 44456899
Q ss_pred EEeCCCcEEEEECCCceeEEEEcCCC---CCeeEEEECCCCCEE------------EEEeCCCeEEEEeCCCCceEEEe-
Q 048118 144 SASWDRTVKVWNLSNCKLRATLAGHT---GYVNTVAVSPDGSLC------------ASGGKDGVILLWDLAEGKRLYSL- 207 (303)
Q Consensus 144 ~~~~dg~i~iwd~~~~~~~~~~~~~~---~~i~~~~~~~~~~~l------------~~~~~d~~v~iwd~~~~~~~~~~- 207 (303)
+++.|++|++||++++++..++.+|. ..+.+++|+|+|+++ ++|+.|++|++||..+++.+..+
T Consensus 198 SgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~ 277 (356)
T 2w18_A 198 GTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVML 277 (356)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEE
T ss_pred EecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEE
Confidence 99999999999999999999998654 357778999999876 56788999999999998876543
Q ss_pred ---cCC--CeEEEEEEcCCCeEEE-EEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeecccccee-EEEEEEc
Q 048118 208 ---DAG--AVIHALCFSPNRYWLC-AATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIY-CTSLNWS 280 (303)
Q Consensus 208 ---~~~--~~v~~~~~s~~~~~l~-~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s 280 (303)
+.+ ..+.+..++ +.+++ ++.|+.|++||+++++.+..++- |... +..++||
T Consensus 278 ~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~g--------------------H~~~vvs~vafS 335 (356)
T 2w18_A 278 YCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPP--------------------VSDQHWSFVKWS 335 (356)
T ss_dssp ECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECC--------------------C--CCCCEEEEC
T ss_pred eeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecC--------------------CCCCeEEEEEEC
Confidence 111 123333333 43444 45699999999999988776532 1111 2347899
Q ss_pred CCCCEEEEeecCCeEEEEecc
Q 048118 281 VDGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 281 p~~~~l~~gs~Dg~v~~w~~~ 301 (303)
|||++|++|+.|++|++||+.
T Consensus 336 PDG~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 336 GTDSHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp SSSSEEEEECTTSCEEEEEEC
T ss_pred CCCCEEEEEECCCcEEEecCC
Confidence 999999999999999999963
No 100
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5.4e-28 Score=201.02 Aligned_cols=230 Identities=17% Similarity=0.270 Sum_probs=187.5
Q ss_pred ecccccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCC--------C---
Q 048118 7 LKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSD--------G--- 75 (303)
Q Consensus 7 ~~~~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--------~--- 75 (303)
....+..|...|.+++|+|++ .++++++.|+.+++|++..... ......+..|...+.++.+... +
T Consensus 51 ~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~ 127 (313)
T 3odt_A 51 LGTVVYTGQGFLNSVCYDSEK-ELLLFGGKDTMINGVPLFATSG--EDPLYTLIGHQGNVCSLSFQDGVVISGSWDKTAK 127 (313)
T ss_dssp EEEEEEECSSCEEEEEEETTT-TEEEEEETTSCEEEEETTCCTT--SCC-CEECCCSSCEEEEEEETTEEEEEETTSEEE
T ss_pred EEEEeecCCccEEEEEECCCC-CEEEEecCCCeEEEEEeeecCC--CCcccchhhcccCEEEEEecCCEEEEEeCCCCEE
Confidence 445577889999999999865 6999999999999999865421 1233445667777777766322 1
Q ss_pred ---------ceecccCCEEEEEEee-CCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEE
Q 048118 76 ---------QFVGHTKDVLSVAFSI-DNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSA 145 (303)
Q Consensus 76 ---------~~~~h~~~i~~i~~~~-~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 145 (303)
.+..|...|.+++|+| ++.++++++.|+.|++||... .... ....+...+.+++|+|++ .++++
T Consensus 128 ~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~~--~~~~~~~~i~~~~~~~~~---~~~~~ 201 (313)
T 3odt_A 128 VWKEGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDK-VIKT--FSGIHNDVVRHLAVVDDG---HFISC 201 (313)
T ss_dssp EEETTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTE-EEEE--ECSSCSSCEEEEEEEETT---EEEEE
T ss_pred EEcCCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCc-eEEE--EeccCcccEEEEEEcCCC---eEEEc
Confidence 2347899999999998 899999999999999999432 2211 222377789999999985 38999
Q ss_pred eCCCcEEEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEecC-CCeEEEEEEcCCCeE
Q 048118 146 SWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDA-GAVIHALCFSPNRYW 224 (303)
Q Consensus 146 ~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~-~~~v~~~~~s~~~~~ 224 (303)
+.|+.|++||+++++....+.+|...|++++|+|++ .|++++.||.|++||+++++.+..+.. ...+.+++|+|++.+
T Consensus 202 ~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 280 (313)
T 3odt_A 202 SNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGDI 280 (313)
T ss_dssp ETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSCE
T ss_pred cCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCCE
Confidence 999999999999999999999999999999999998 588999999999999999988877754 458999999999999
Q ss_pred EEEEcCCcEEEEeCCCCceeee
Q 048118 225 LCAATEQSIKIWDLESKSIVED 246 (303)
Q Consensus 225 l~~~~~~~i~iwd~~~~~~~~~ 246 (303)
++++.|+.|++||+++++....
T Consensus 281 ~~~~~dg~i~iw~~~~~~~~~~ 302 (313)
T 3odt_A 281 IVGSSDNLVRIFSQEKSRWASE 302 (313)
T ss_dssp EEEETTSCEEEEESCGGGCCC-
T ss_pred EEEeCCCcEEEEeCCCCceeeh
Confidence 9999999999999988766543
No 101
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=7.7e-29 Score=233.71 Aligned_cols=255 Identities=14% Similarity=0.108 Sum_probs=186.6
Q ss_pred cccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEE
Q 048118 10 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAF 89 (303)
Q Consensus 10 ~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~ 89 (303)
.+.+|...+..++|+|+ +++|+||+.|++|++||+........ .+..+.+.. .--.+|...|.+++|
T Consensus 430 ~l~G~~~~v~sv~~spd-g~~laSgs~DgtVrlWd~~~g~~~~~-----------~~~~~~l~~-~~~~~h~~~V~svaf 496 (902)
T 2oaj_A 430 LLKGGVRTKRQKLPAEY-GTAFITGHSNGSVRIYDASHGDIQDN-----------ASFEVNLSR-TLNKAKELAVDKISF 496 (902)
T ss_dssp SCCCSBCCCCCCCCCSE-EEEEEEEETTSEEEEEESSCCTTTTT-----------BCEEEEHHH-HTTCSSSCCEEEEEE
T ss_pred cccCCcCCCCccccccc-CcEEEEecCCCcEEEEECCCccccCC-----------ceEEeechh-hcCCCCCCceeEEEe
Confidence 46788888888899986 47999999999999999875421100 000000000 000268899999999
Q ss_pred eeCCCEEEEEeCCCcEEEEecCCcee-------------------------------------------eeeecCCCCcc
Q 048118 90 SIDNRQIVSASRDRTIKLWNTLGECK-------------------------------------------YTIQEGDAHTE 126 (303)
Q Consensus 90 ~~~~~~l~t~~~d~~i~vw~~~~~~~-------------------------------------------~~~~~~~~~~~ 126 (303)
+|++++||+|+.|++|+||++.+... ........|..
T Consensus 497 spdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~ 576 (902)
T 2oaj_A 497 AAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKG 576 (902)
T ss_dssp ETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSC
T ss_pred cCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCC
Confidence 99999999999999999999743210 01223345888
Q ss_pred ceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEE--E---Ec-CCCCCeeEEEEC-----CCC---CEEEEEeCCCe
Q 048118 127 WVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRA--T---LA-GHTGYVNTVAVS-----PDG---SLCASGGKDGV 192 (303)
Q Consensus 127 ~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~--~---~~-~~~~~i~~~~~~-----~~~---~~l~~~~~d~~ 192 (303)
.|.+++|+|++ .+++|+.|++|++||+++..... . +. +|.+.|++++|+ ||| ++|++|+.|++
T Consensus 577 ~V~svafSpdG---~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~t 653 (902)
T 2oaj_A 577 KTSAINNSNIG---FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGE 653 (902)
T ss_dssp SEEEEEECBTS---EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSE
T ss_pred cEEEEEecCCc---EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCc
Confidence 99999999985 79999999999999998876543 2 22 788999999999 885 79999999999
Q ss_pred EEEEeC---CCCceEEEec------CCCeEEEEE-Ec----------------------CCCeEEEEEcCCcEEEEeCCC
Q 048118 193 ILLWDL---AEGKRLYSLD------AGAVIHALC-FS----------------------PNRYWLCAATEQSIKIWDLES 240 (303)
Q Consensus 193 v~iwd~---~~~~~~~~~~------~~~~v~~~~-~s----------------------~~~~~l~~~~~~~i~iwd~~~ 240 (303)
|++||+ .+++.+..+. ...+|.+++ |+ +++.+++++ +..|++|++.+
T Consensus 654 v~~wd~~p~~~g~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~~~-~~~ir~~~~~~ 732 (902)
T 2oaj_A 654 VITYKILPASGGKFDVQLMDITNVTSKGPIHKIDAFSKETKSSCLATIPKMQNLSKGLCIPGIVLITG-FDDIRLITLGK 732 (902)
T ss_dssp EEEEEEEECGGGCEEEEEEEEEECCSSCCCCEEEEEETTTCCBCBCBHHHHHGGGGTCCCCEEEEEEC-SSEEEEECTTC
T ss_pred EEEEEEecCCCCcEEEEecCceecCCCCceEEEEeEecCCCCcccCCHHHHhccCCCCCCCeEEEEEe-ccceEEEeCcc
Confidence 999999 6776554442 234555554 55 455555555 78999999988
Q ss_pred CceeeeeeeccccccccccCccceeeccccceeEEEE---E------EcCCCCEEEEeecCCeEEEEecc
Q 048118 241 KSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSL---N------WSVDGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~------~sp~~~~l~~gs~Dg~v~~w~~~ 301 (303)
++...+.- .+...+.++ . |++++..|++++.||+|++|++-
T Consensus 733 ~k~~~k~~--------------------~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~s~p 782 (902)
T 2oaj_A 733 SKSTHKGF--------------------KYPLAATGLSYISTVEKNNDRKNLTVIITLEINGHLRVFTIP 782 (902)
T ss_dssp CCEEEEEC--------------------SSCEEEEEEEEEEEECSSSCEEEEEEEEEEETTSEEEEEETT
T ss_pred ccceeeEc--------------------ccceeeeEEEEEEeccccccccCceEEEEEeCCCcEEEEECc
Confidence 77654331 112233444 5 78889999999999999999974
No 102
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.97 E-value=2.1e-28 Score=210.46 Aligned_cols=233 Identities=15% Similarity=0.203 Sum_probs=183.5
Q ss_pred eecccccccccceeeeecCCC---CC---cEEEEecCCCcEEEEEcccCccccceeeeeecCC-----CcceEEEEeC--
Q 048118 6 VLKGTMRAHTDMVTAIATPID---NS---DMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGH-----SHFVQDVVLS-- 72 (303)
Q Consensus 6 ~~~~~~~~h~~~v~~v~~~~~---~~---~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~-----~~~i~~~~~~-- 72 (303)
.....+.+|...|++++|+|+ ++ .+|++++.|+.|++|++.............+..| ...|.++.++
T Consensus 53 ~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 132 (397)
T 1sq9_A 53 DKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGAS 132 (397)
T ss_dssp GGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECC
T ss_pred CcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeec
Confidence 345668899999999999986 24 6899999999999999976543222223444555 4667777666
Q ss_pred --CCCce-e------------------------------------------cccCCEEEEEEeeCCCEEEEEeCCCcEEE
Q 048118 73 --SDGQF-V------------------------------------------GHTKDVLSVAFSIDNRQIVSASRDRTIKL 107 (303)
Q Consensus 73 --~~~~~-~------------------------------------------~h~~~i~~i~~~~~~~~l~t~~~d~~i~v 107 (303)
+++.+ . .|...|.+++|+|++ ++++++.|+.|++
T Consensus 133 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i 211 (397)
T 1sq9_A 133 NDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQI 211 (397)
T ss_dssp C----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEE
T ss_pred cCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEE
Confidence 55432 1 156678899999999 9999999999999
Q ss_pred EecCCceee-eeecCCCC---ccceEEEEEcCCCCCCEEEEEeCC---CcEEEEECCCceeEEEEcC-------------
Q 048118 108 WNTLGECKY-TIQEGDAH---TEWVSCVRFSPNTLQPTIVSASWD---RTVKVWNLSNCKLRATLAG------------- 167 (303)
Q Consensus 108 w~~~~~~~~-~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~d---g~i~iwd~~~~~~~~~~~~------------- 167 (303)
||+...... .+.....| ...|.+++|+|++ ..+++++.| +.|++||+++++....+..
T Consensus 212 ~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~--~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (397)
T 1sq9_A 212 SELSTLRPLYNFESQHSMINNSNSIRSVKFSPQG--SLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFA 289 (397)
T ss_dssp EETTTTEEEEEEECCC---CCCCCEEEEEECSST--TEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBS
T ss_pred EECCCCceeEEEeccccccccCCccceEEECCCC--CEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccc
Confidence 998654322 22211126 7789999999985 578999999 9999999999998888988
Q ss_pred CCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEec------C----------------CCeEEEEEEcCCC---
Q 048118 168 HTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLD------A----------------GAVIHALCFSPNR--- 222 (303)
Q Consensus 168 ~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~------~----------------~~~v~~~~~s~~~--- 222 (303)
|...|.+++|+|++++|++++.|+.|++||+++++.+..+. . ...|.+++|+|++
T Consensus 290 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~ 369 (397)
T 1sq9_A 290 HSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRS 369 (397)
T ss_dssp BSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSB
T ss_pred cCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccc
Confidence 99999999999999999999999999999999999888876 3 6789999999996
Q ss_pred --------eEEEEEcCCcEEEEeCCCC
Q 048118 223 --------YWLCAATEQSIKIWDLESK 241 (303)
Q Consensus 223 --------~~l~~~~~~~i~iwd~~~~ 241 (303)
.+++++.|+.|++||++++
T Consensus 370 ~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 370 GMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp STTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred cccccccceEEEecCCCcEEEEEcCCC
Confidence 4556677999999998765
No 103
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=1.7e-28 Score=209.31 Aligned_cols=199 Identities=12% Similarity=0.168 Sum_probs=153.4
Q ss_pred cccceeeeecCCCCCcEEE--EecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEee
Q 048118 14 HTDMVTAIATPIDNSDMIV--TASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSI 91 (303)
Q Consensus 14 h~~~v~~v~~~~~~~~~~~--t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~ 91 (303)
+.+.+.+++|+|++. +++ +++.|++|++||....... . ...|.+.|.+++|+|
T Consensus 132 ~~~~~~~v~fSpDg~-~la~as~~~d~~i~iwd~~~~~~~-----~-------------------~~~~~~~V~~v~fsp 186 (365)
T 4h5i_A 132 ADDYTKLVYISREGT-VAAIASSKVPAIMRIIDPSDLTEK-----F-------------------EIETRGEVKDLHFST 186 (365)
T ss_dssp TTCCEEEEEECTTSS-CEEEEESCSSCEEEEEETTTTEEE-----E-------------------EEECSSCCCEEEECT
T ss_pred cccCEEEEEEcCCCC-EEEEEECCCCCEEEEeECCCCcEE-----E-------------------EeCCCCceEEEEEcc
Confidence 344577899999864 554 5557999999998653321 1 123677899999999
Q ss_pred CCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCC----cEEEEECCCcee----EE
Q 048118 92 DNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDR----TVKVWNLSNCKL----RA 163 (303)
Q Consensus 92 ~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg----~i~iwd~~~~~~----~~ 163 (303)
+|+++++++.++.+.+|...+.. ........|...|.+++|+|++ ..+++++.|+ .++.|++..... ..
T Consensus 187 dg~~l~s~s~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~v~fspdg--~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~ 263 (365)
T 4h5i_A 187 DGKVVAYITGSSLEVISTVTGSC-IARKTDFDKNWSLSKINFIADD--TVLIAASLKKGKGIVLTKISIKSGNTSVLRSK 263 (365)
T ss_dssp TSSEEEEECSSCEEEEETTTCCE-EEEECCCCTTEEEEEEEEEETT--EEEEEEEESSSCCEEEEEEEEETTEEEEEEEE
T ss_pred CCceEEeccceeEEEEEeccCcc-eeeeecCCCCCCEEEEEEcCCC--CEEEEEecCCcceeEEeecccccceecceeee
Confidence 99999999876654444443332 2223334577889999999986 4678887776 688898866543 34
Q ss_pred EEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEec--CCCeEEEEEEcCCCeEEEE-EcCCcEEEEeCCC
Q 048118 164 TLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLD--AGAVIHALCFSPNRYWLCA-ATEQSIKIWDLES 240 (303)
Q Consensus 164 ~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~-~~~~~i~iwd~~~ 240 (303)
.+.+|...|++++|+|+|++||+|+.|++|++||+++++++.++. +...|++++|+|++.+|++ +.|+.|+|||+..
T Consensus 264 ~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 264 QVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp EEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred eecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 577899999999999999999999999999999999999998863 4678999999999977765 5699999999854
No 104
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.97 E-value=1e-27 Score=201.70 Aligned_cols=205 Identities=27% Similarity=0.419 Sum_probs=168.3
Q ss_pred ceecccCCEEEEEEeeC-CCEEEEEeCCCcEEEEecCCce---eeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcE
Q 048118 76 QFVGHTKDVLSVAFSID-NRQIVSASRDRTIKLWNTLGEC---KYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTV 151 (303)
Q Consensus 76 ~~~~h~~~i~~i~~~~~-~~~l~t~~~d~~i~vw~~~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i 151 (303)
.+.||++.|++++|+|+ +.+|+||+.|++|+|||+.... .........|...|.+++|+|++ ..+++++.|+.|
T Consensus 33 tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg--~~l~s~~~d~~i 110 (340)
T 4aow_A 33 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDG--QFALSGSWDGTL 110 (340)
T ss_dssp EECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTS--SEEEEEETTSEE
T ss_pred EECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCC--CEEEEEcccccc
Confidence 46789999999999997 6899999999999999975422 11223345788899999999986 589999999999
Q ss_pred EEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEe--cCCCeEEEEEEcCCC--e-EEE
Q 048118 152 KVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL--DAGAVIHALCFSPNR--Y-WLC 226 (303)
Q Consensus 152 ~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~--~~~~~v~~~~~s~~~--~-~l~ 226 (303)
++|+............+...+....++|++++|++++.|+.+++||+......... .....+..++|++++ . +++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s 190 (340)
T 4aow_A 111 RLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVS 190 (340)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEE
T ss_pred eEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEE
Confidence 99999988888888888889999999999999999999999999999876554332 235678899998864 3 445
Q ss_pred EEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEeccc
Q 048118 227 AATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIGR 302 (303)
Q Consensus 227 ~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~~ 302 (303)
++.|+.|++||+++++.+..+. .+...+.+++|+|++++|++|+.||.|++||+..
T Consensus 191 ~~~d~~i~i~d~~~~~~~~~~~--------------------~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~ 246 (340)
T 4aow_A 191 CGWDKLVKVWNLANCKLKTNHI--------------------GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNE 246 (340)
T ss_dssp EETTSCEEEEETTTTEEEEEEC--------------------CCSSCEEEEEECTTSSEEEEEETTCEEEEEETTT
T ss_pred EcCCCEEEEEECCCCceeeEec--------------------CCCCcEEEEEECCCCCEEEEEeCCCeEEEEEecc
Confidence 6679999999999887654432 3344578899999999999999999999999853
No 105
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.97 E-value=5.5e-28 Score=207.22 Aligned_cols=203 Identities=17% Similarity=0.274 Sum_probs=163.1
Q ss_pred ceecccCCEEEEEEeeCC-CEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEE
Q 048118 76 QFVGHTKDVLSVAFSIDN-RQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVW 154 (303)
Q Consensus 76 ~~~~h~~~i~~i~~~~~~-~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iw 154 (303)
.+.+|.+.|.+++|+|++ .+|++|+.|+.|++||..............|...|.+++|+|+. ...+++++.|+.|++|
T Consensus 68 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~l~s~~~d~~i~iw 146 (383)
T 3ei3_B 68 TASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFN-TNQLFVSSIRGATTLR 146 (383)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTE-EEEEEEEETTTEEEEE
T ss_pred eccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCC-CCEEEEEeCCCEEEEE
Confidence 356899999999999999 89999999999999998754433333334588899999999943 2579999999999999
Q ss_pred ECCCceeEEEEcC---CCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEec-CCCeEEEEEEcCCCe--EEEEE
Q 048118 155 NLSNCKLRATLAG---HTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLD-AGAVIHALCFSPNRY--WLCAA 228 (303)
Q Consensus 155 d~~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~--~l~~~ 228 (303)
|+.+. ....+.. |...|.+++|+|++++|++++.|+.|++||++ ++.+..+. ....|.+++|+|++. +++++
T Consensus 147 d~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~ 224 (383)
T 3ei3_B 147 DFSGS-VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GHEIFKEKLHKAKVTHAEFNPRCDWLMATSS 224 (383)
T ss_dssp ETTSC-EEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SCEEEEEECSSSCEEEEEECSSCTTEEEEEE
T ss_pred ECCCC-ceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CCEEEEeccCCCcEEEEEECCCCCCEEEEEe
Confidence 99864 4444443 34789999999999999999999999999994 56666654 567899999999985 44556
Q ss_pred cCCcEEEEeCCCCc----eeeeeeeccccccccccCccceeeccccceeEEEEEEcC-CCCEEEEeecCCeEEEEeccc
Q 048118 229 TEQSIKIWDLESKS----IVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSV-DGSTLFSGYTDGVIRVWGIGR 302 (303)
Q Consensus 229 ~~~~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp-~~~~l~~gs~Dg~v~~w~~~~ 302 (303)
.|+.|++||+++.+ .+..+ .+...+.+++|+| ++.+|++++.||.|++||+..
T Consensus 225 ~d~~i~iwd~~~~~~~~~~~~~~---------------------~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~ 282 (383)
T 3ei3_B 225 VDATVKLWDLRNIKDKNSYIAEM---------------------PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYD 282 (383)
T ss_dssp TTSEEEEEEGGGCCSTTCEEEEE---------------------ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTB
T ss_pred CCCEEEEEeCCCCCcccceEEEe---------------------cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCC
Confidence 79999999998632 22111 2345678899999 999999999999999999853
No 106
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.9e-28 Score=207.21 Aligned_cols=238 Identities=11% Similarity=0.059 Sum_probs=173.2
Q ss_pred cceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcc-eEEEEeCCCCceecccCCEEEEEEee--C
Q 048118 16 DMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHF-VQDVVLSSDGQFVGHTKDVLSVAFSI--D 92 (303)
Q Consensus 16 ~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~h~~~i~~i~~~~--~ 92 (303)
..|.++.++|. +++++.|++|++|+........ ...... +.. ...+|.++|.+++|+| +
T Consensus 77 ~~v~~~~~~~~----~~s~s~D~~i~~w~~~~~~~~~-------~~~~~~~~~~-------~~~~~~~~v~~~~~~~~~~ 138 (343)
T 3lrv_A 77 PNPRTGGEHPA----IISRGPCNRLLLLYPGNQITIL-------DSKTNKVLRE-------IEVDSANEIIYMYGHNEVN 138 (343)
T ss_dssp ECCCTTCCCCS----EEEECSTTEEEEEETTTEEEEE-------ETTTCCEEEE-------EECCCSSCEEEEECCC---
T ss_pred CCceeeeeCCc----eEEecCCCeEEEEEccCceEEe-------ecCCcceeEE-------eecCCCCCEEEEEcCCCCC
Confidence 56778888865 9999999999999875321000 000000 111 1125678999999999 9
Q ss_pred CCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeE-EEEcC-CCC
Q 048118 93 NRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLR-ATLAG-HTG 170 (303)
Q Consensus 93 ~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~-~~~~~-~~~ 170 (303)
+.++++++.|+.|++||+......... ...+...+.+++|+|++ ..+++|+.||.|++||+++++.. ..+.. |.+
T Consensus 139 ~~~l~s~s~dg~i~~wd~~~~~~~~~~-~~~~~~~i~~~~~~pdg--~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~ 215 (343)
T 3lrv_A 139 TEYFIWADNRGTIGFQSYEDDSQYIVH-SAKSDVEYSSGVLHKDS--LLLALYSPDGILDVYNLSSPDQASSRFPVDEEA 215 (343)
T ss_dssp CCEEEEEETTCCEEEEESSSSCEEEEE-CCCSSCCCCEEEECTTS--CEEEEECTTSCEEEEESSCTTSCCEECCCCTTS
T ss_pred CCEEEEEeCCCcEEEEECCCCcEEEEE-ecCCCCceEEEEECCCC--CEEEEEcCCCEEEEEECCCCCCCccEEeccCCC
Confidence 999999999999999998654332222 22345569999999986 57999999999999999998876 77887 999
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEecC----CCeE--EEEEEcCCCeEEEEE-c-CCcEEEEeCCCCc
Q 048118 171 YVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDA----GAVI--HALCFSPNRYWLCAA-T-EQSIKIWDLESKS 242 (303)
Q Consensus 171 ~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~----~~~v--~~~~~s~~~~~l~~~-~-~~~i~iwd~~~~~ 242 (303)
+|++++|+|++.+|++++ |++|++||+++++.+..+.. ...+ .+++|+|++.+++++ . ++.|++|+++...
T Consensus 216 ~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~ 294 (343)
T 3lrv_A 216 KIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKT 294 (343)
T ss_dssp CEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred CEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccc
Confidence 999999999999999999 55999999998876544431 1223 469999999877663 3 8999999986543
Q ss_pred eeeeeeeccccccccccCccceeeccccceeEEEEEEcC---CCCEEEEeecCCeEEEEe
Q 048118 243 IVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSV---DGSTLFSGYTDGVIRVWG 299 (303)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp---~~~~l~~gs~Dg~v~~w~ 299 (303)
..... ..+..+.|+| +...|++++.||.++++-
T Consensus 295 ~~~~~------------------------~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~ 330 (343)
T 3lrv_A 295 KNWTK------------------------DEESALCLQSDTADFTDMDVVCGDGGIAAIL 330 (343)
T ss_dssp CSEEE------------------------EEEEECCC----CCCCEEEEEEETTEEEEEE
T ss_pred cceEe------------------------cCceeEecCccccccceeEEEecCCceEEEE
Confidence 21111 1234567787 888999999999998873
No 107
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.97 E-value=9.1e-28 Score=204.53 Aligned_cols=204 Identities=18% Similarity=0.266 Sum_probs=165.5
Q ss_pred ceecccCCEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEE
Q 048118 76 QFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWN 155 (303)
Q Consensus 76 ~~~~h~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd 155 (303)
.+.+|...|.+++|+|++.+|++++.|+.|++||+.............|...|.+++|+|++ ..+++++.|+.|++||
T Consensus 47 ~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~v~i~d 124 (372)
T 1k8k_C 47 ELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNE--KKFAVGSGSRVISICY 124 (372)
T ss_dssp EEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTS--SEEEEEETTSSEEEEE
T ss_pred eecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCC--CEEEEEeCCCEEEEEE
Confidence 35689999999999999999999999999999998654333233334577889999999986 5899999999999999
Q ss_pred CCCce----eEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCC------------------CCceEEEec-CCCe
Q 048118 156 LSNCK----LRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLA------------------EGKRLYSLD-AGAV 212 (303)
Q Consensus 156 ~~~~~----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~------------------~~~~~~~~~-~~~~ 212 (303)
+...+ .......|...|.+++|+|++++|++++.|+.|++||++ .++.+..+. ....
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (372)
T 1k8k_C 125 FEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGW 204 (372)
T ss_dssp EETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSC
T ss_pred ecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCe
Confidence 97765 223336688999999999999999999999999999953 566666664 4568
Q ss_pred EEEEEEcCCCeEE-EEEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeec
Q 048118 213 IHALCFSPNRYWL-CAATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYT 291 (303)
Q Consensus 213 v~~~~~s~~~~~l-~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~ 291 (303)
+.+++|+|++.++ +++.|+.|++||+++++.+..+. .+...+.+++|+|++.+|++| .
T Consensus 205 v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--------------------~~~~~v~~~~~~~~~~~l~~~-~ 263 (372)
T 1k8k_C 205 VHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLA--------------------SETLPLLAVTFITESSLVAAG-H 263 (372)
T ss_dssp EEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEE--------------------CSSCCEEEEEEEETTEEEEEE-T
T ss_pred EEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEc--------------------cCCCCeEEEEEecCCCEEEEE-e
Confidence 9999999998555 55678999999998887665443 223346789999999988888 8
Q ss_pred CCeEEEEeccc
Q 048118 292 DGVIRVWGIGR 302 (303)
Q Consensus 292 Dg~v~~w~~~~ 302 (303)
||.|++|++..
T Consensus 264 d~~i~i~~~~~ 274 (372)
T 1k8k_C 264 DCFPVLFTYDS 274 (372)
T ss_dssp TSSCEEEEEET
T ss_pred CCeEEEEEccC
Confidence 99999999853
No 108
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.7e-28 Score=211.87 Aligned_cols=246 Identities=11% Similarity=0.144 Sum_probs=180.3
Q ss_pred eeeee-cCCCcceEEEEeCC-CCce-----------------------------ecccCCEEEEEEeeCCCEEEEEeCCC
Q 048118 55 ARRRL-TGHSHFVQDVVLSS-DGQF-----------------------------VGHTKDVLSVAFSIDNRQIVSASRDR 103 (303)
Q Consensus 55 ~~~~~-~~~~~~i~~~~~~~-~~~~-----------------------------~~h~~~i~~i~~~~~~~~l~t~~~d~ 103 (303)
....+ .+|...|.++.++| ++.+ .+|.+.|.+++|+|++.+|++++.|+
T Consensus 54 ~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg 133 (437)
T 3gre_A 54 LIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDG 133 (437)
T ss_dssp EEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCC
Confidence 44555 67888899998888 6532 15788999999999999999999999
Q ss_pred cEEEEecC----Cceeeeee-------cCCC--CccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEEEcC--C
Q 048118 104 TIKLWNTL----GECKYTIQ-------EGDA--HTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAG--H 168 (303)
Q Consensus 104 ~i~vw~~~----~~~~~~~~-------~~~~--~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~--~ 168 (303)
.|++||+. +....... .... +...+.++.+........+++++.|+.|++||+++++....+.. |
T Consensus 134 ~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h 213 (437)
T 3gre_A 134 QIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPR 213 (437)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGG
T ss_pred EEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCC
Confidence 99999973 11111000 0011 34456666633222235899999999999999999999888888 8
Q ss_pred CCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEe--cCCCeEEEEEEcC----CCeEEEE-EcCCcEEEEeCCCC
Q 048118 169 TGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL--DAGAVIHALCFSP----NRYWLCA-ATEQSIKIWDLESK 241 (303)
Q Consensus 169 ~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~--~~~~~v~~~~~s~----~~~~l~~-~~~~~i~iwd~~~~ 241 (303)
...|++++|+|++++|++|+.||+|++||+++++.+..+ .....|.+++|+| ++.++++ +.|+.|++||++++
T Consensus 214 ~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 293 (437)
T 3gre_A 214 HGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKG 293 (437)
T ss_dssp GCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTT
T ss_pred CCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCC
Confidence 899999999999999999999999999999999988876 4456899996654 5656655 46889999999998
Q ss_pred ceeeeeeecccccc----ccccCccceeeccc--cceeEEEEEEcCCCCEEEEeecCCeEEEEecc
Q 048118 242 SIVEDLKVDLKTEA----EKSEATTATTTIKK--KNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 242 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~--~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~ 301 (303)
+.+..+........ ...........+.+ +...+++++|+ ++++|++|+.||.|++||+.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~ 358 (437)
T 3gre_A 294 HCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLN 358 (437)
T ss_dssp EEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETT
T ss_pred cEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECC
Confidence 87766653211000 00000000111222 55567889999 77899999999999999985
No 109
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=4.3e-27 Score=204.78 Aligned_cols=267 Identities=14% Similarity=0.104 Sum_probs=198.4
Q ss_pred cccccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCc-----------
Q 048118 8 KGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQ----------- 76 (303)
Q Consensus 8 ~~~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----------- 76 (303)
+..+..+ ..+.+++|+| ++.++++++.|+.|++||....+.........+.+|...+..+.+++++.
T Consensus 116 ~~~~~~~-~~~~~~~~s~-~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v 193 (433)
T 3bws_A 116 ISRFKTG-FQPKSVRFID-NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAV 193 (433)
T ss_dssp EEEEECS-SCBCCCEESS-SSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEE
T ss_pred EEEEcCC-CCceEEEEeC-CCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEE
Confidence 3334444 3466899998 56788999999999999987654322111113446667777777766553
Q ss_pred -------------eecccCCEEEEEEeeCCCEEE-EEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEE
Q 048118 77 -------------FVGHTKDVLSVAFSIDNRQIV-SASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTI 142 (303)
Q Consensus 77 -------------~~~h~~~i~~i~~~~~~~~l~-t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 142 (303)
+..|...+.+++|+|++.+++ +++.|+.|++||......... .. ....+.+++|+|++ ..+
T Consensus 194 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~--~~-~~~~~~~~~~~~~g--~~l 268 (433)
T 3bws_A 194 HVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRK--TD-KIGLPRGLLLSKDG--KEL 268 (433)
T ss_dssp EEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEE--CC-CCSEEEEEEECTTS--SEE
T ss_pred EEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEE--ec-CCCCceEEEEcCCC--CEE
Confidence 235777899999999999875 555899999999865432221 12 23458899999986 356
Q ss_pred EEEe--------CCCcEEEEECCCceeEEEEcCCCCCeeEEEECCCCCEE-EEEeCCCeEEEEeCCCCceEEEecCCCeE
Q 048118 143 VSAS--------WDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLC-ASGGKDGVILLWDLAEGKRLYSLDAGAVI 213 (303)
Q Consensus 143 ~~~~--------~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~d~~v~iwd~~~~~~~~~~~~~~~v 213 (303)
++++ .|+.|++||+.+++....+ .|...+..++|+|+++.+ ++++.|+.|++||+.+++.+..+.....+
T Consensus 269 ~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~ 347 (433)
T 3bws_A 269 YIAQFSASNQESGGGRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDKP 347 (433)
T ss_dssp EEEEEESCTTCSCCEEEEEEETTTTEEEEEE-EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECSSSE
T ss_pred EEEECCCCccccCCCeEEEEECCCCcEEeec-cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCCCCC
Confidence 6666 4889999999988776655 345678899999999755 66688999999999999888888777889
Q ss_pred EEEEEcCCCeEEEEEc----------------CCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEE
Q 048118 214 HALCFSPNRYWLCAAT----------------EQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSL 277 (303)
Q Consensus 214 ~~~~~s~~~~~l~~~~----------------~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (303)
.+++|+|++..++++. ||.|++||+++++.+..+.. ...+..+
T Consensus 348 ~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~---------------------~~~~~~~ 406 (433)
T 3bws_A 348 NTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA---------------------GNQPTGL 406 (433)
T ss_dssp EEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC---------------------SSSEEEE
T ss_pred CeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC---------------------CCCCceE
Confidence 9999999987655443 35999999998877654431 1134679
Q ss_pred EEcCCCCEEEEeec-CCeEEEEecccC
Q 048118 278 NWSVDGSTLFSGYT-DGVIRVWGIGRY 303 (303)
Q Consensus 278 ~~sp~~~~l~~gs~-Dg~v~~w~~~~~ 303 (303)
+|+|++++|++++. |+.|++|++..|
T Consensus 407 ~~s~dg~~l~~~~~~d~~i~v~~~~~~ 433 (433)
T 3bws_A 407 DVSPDNRYLVISDFLDHQIRVYRRDGF 433 (433)
T ss_dssp EECTTSCEEEEEETTTTEEEEEEETTC
T ss_pred EEcCCCCEEEEEECCCCeEEEEEecCC
Confidence 99999999988775 999999999865
No 110
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.96 E-value=9.7e-28 Score=201.82 Aligned_cols=207 Identities=24% Similarity=0.328 Sum_probs=162.9
Q ss_pred eecccCCEEEEEEeeCCCEEEEEeCCCcEEEEecCCcee--eeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEE
Q 048118 77 FVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECK--YTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVW 154 (303)
Q Consensus 77 ~~~h~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iw 154 (303)
+.+|.+.|.+++|+|++.+|++++.|+.|++|++..... ........|...|.+++|+|......+++++.||.|++|
T Consensus 7 ~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vw 86 (351)
T 3f3f_A 7 DSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLW 86 (351)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEE
T ss_pred CcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEE
Confidence 468999999999999999999999999999999864311 122223467888999999994112589999999999999
Q ss_pred ECCCc---------eeEEEEcCCCCCeeEEEECCC--CCEEEEEeCCCeEEEEeCCCCceEEEe--------------cC
Q 048118 155 NLSNC---------KLRATLAGHTGYVNTVAVSPD--GSLCASGGKDGVILLWDLAEGKRLYSL--------------DA 209 (303)
Q Consensus 155 d~~~~---------~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~v~iwd~~~~~~~~~~--------------~~ 209 (303)
|+.++ +....+..|...|.+++|+|+ +++|++++.||.|++||+++++.+..+ ..
T Consensus 87 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (351)
T 3f3f_A 87 EEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANH 166 (351)
T ss_dssp EECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSC
T ss_pred ecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCc
Confidence 99876 557778899999999999999 999999999999999999887643322 23
Q ss_pred CCeEEEEEEcCC---CeEE-EEEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCC--
Q 048118 210 GAVIHALCFSPN---RYWL-CAATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDG-- 283 (303)
Q Consensus 210 ~~~v~~~~~s~~---~~~l-~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~-- 283 (303)
...+.+++|+|+ +.++ +++.++.+.+|+...++.... ..+..+...+.+++|+|++
T Consensus 167 ~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~h~~~i~~~~~~p~~~~ 228 (351)
T 3f3f_A 167 LQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVA------------------AKLPGHKSLIRSISWAPSIGR 228 (351)
T ss_dssp SCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEE------------------EECCCCCSCEEEEEECCCSSC
T ss_pred ccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeee------------------eecCCCCcceeEEEECCCCCC
Confidence 457889999996 5544 555677887777665543211 1233455567899999998
Q ss_pred --CEEEEeecCCeEEEEecc
Q 048118 284 --STLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 284 --~~l~~gs~Dg~v~~w~~~ 301 (303)
.+|++|+.||.|++||+.
T Consensus 229 ~~~~l~s~~~dg~i~iwd~~ 248 (351)
T 3f3f_A 229 WYQLIATGCKDGRIRIFKIT 248 (351)
T ss_dssp SSEEEEEEETTSCEEEEEEE
T ss_pred cceEEEEEcCCCeEEEEeCC
Confidence 799999999999999985
No 111
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=6.3e-28 Score=210.99 Aligned_cols=248 Identities=11% Similarity=0.110 Sum_probs=175.7
Q ss_pred ccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEeeC
Q 048118 13 AHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSID 92 (303)
Q Consensus 13 ~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~~ 92 (303)
.|.+.|.+++|+|++ .+||+++.||++++|+... ....+. |...+ ....|.+++|+|+
T Consensus 83 ~~~~~V~~vawSPdG-~~LAs~s~dg~V~iwd~~~-------~l~~l~-~~~~~-------------~~~sv~svafSPD 140 (588)
T 2j04_A 83 QPVCYPRVCKPSPID-DWMAVLSNNGNVSVFKDNK-------MLTNLD-SKGNL-------------SSRTYHCFEWNPI 140 (588)
T ss_dssp SCSCCEEEEEECSSS-SCEEEEETTSCEEEEETTE-------EEEECC-CSSCS-------------TTTCEEEEEECSS
T ss_pred CCCCcEEEEEECCCC-CEEEEEeCCCcEEEEeCCc-------eeeecc-CCCcc-------------ccccEEEEEEcCC
Confidence 457889999999975 6899999999999998532 111111 11100 1235899999999
Q ss_pred CCEEEEEeCCCcEEEEecCCcee--------eeee-cCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCcee--
Q 048118 93 NRQIVSASRDRTIKLWNTLGECK--------YTIQ-EGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKL-- 161 (303)
Q Consensus 93 ~~~l~t~~~d~~i~vw~~~~~~~--------~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~-- 161 (303)
|++|++|+.||+|++|+..+... ..+. ....|..+|.+++|+|++ +++++.|++|++||+.+++.
T Consensus 141 G~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg----Laass~D~tVrlWd~~~~~~~~ 216 (588)
T 2j04_A 141 ESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV----LVAALSNNSVFSMTVSASSHQP 216 (588)
T ss_dssp SSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE----EEEEETTCCEEEECCCSSSSCC
T ss_pred CCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc----EEEEeCCCeEEEEECCCCcccc
Confidence 99999999999999999865421 1111 123577899999999974 78899999999999987763
Q ss_pred -EEEE-cCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCce-EEEecCCCeEEEEEE--cCCCeEEEEEc-CCcEEE
Q 048118 162 -RATL-AGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKR-LYSLDAGAVIHALCF--SPNRYWLCAAT-EQSIKI 235 (303)
Q Consensus 162 -~~~~-~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~-~~~~~~~~~v~~~~~--s~~~~~l~~~~-~~~i~i 235 (303)
..++ .+|...|.+++|+ ++.||+++ +++|++||+.+++. .....+...+.+++| +|++..++.+. +|. ++
T Consensus 217 ~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-kl 292 (588)
T 2j04_A 217 VSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KV 292 (588)
T ss_dssp CEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EE
T ss_pred ceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EE
Confidence 3556 4788899999999 68999887 69999999998877 555567788999999 99998887776 788 99
Q ss_pred EeCCCCceeeeeeecccccc---ccccCccceeeccccceeEEEEEEcCCCCEEEEeec
Q 048118 236 WDLESKSIVEDLKVDLKTEA---EKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYT 291 (303)
Q Consensus 236 wd~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~ 291 (303)
|..+.-..-........... ...........+.. ...+.+++|||||..+|+++.
T Consensus 293 w~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~~-~~~I~~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 293 LLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYET-TLVIHGISLSPDGYSIAIVYD 350 (588)
T ss_dssp EESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSCC-EEEEEEEEECTTSSEEEEEEE
T ss_pred EeeccEEECCCceEEEEcCCEEEEEECCCCceeeecc-ceEEEEEEECCCCCEEEEEEe
Confidence 99863111000000000000 00000011112233 556889999999999998874
No 112
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=1.5e-26 Score=198.67 Aligned_cols=245 Identities=14% Similarity=0.125 Sum_probs=186.0
Q ss_pred eecccccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEE
Q 048118 6 VLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVL 85 (303)
Q Consensus 6 ~~~~~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~ 85 (303)
.++..+..|. .+.+++|+|++..++++++.|++|++||+...+. ... + .+...+.
T Consensus 23 ~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~-----~~~------------------~-~~~~~v~ 77 (391)
T 1l0q_A 23 KVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNV-----IAT------------------V-PAGSSPQ 77 (391)
T ss_dssp EEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEE-----EEE------------------E-ECSSSEE
T ss_pred eEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeE-----EEE------------------E-ECCCCcc
Confidence 3444566664 5899999998765568888999999999864321 111 1 1233789
Q ss_pred EEEEeeCCCEEE-EEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEE
Q 048118 86 SVAFSIDNRQIV-SASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRAT 164 (303)
Q Consensus 86 ~i~~~~~~~~l~-t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~ 164 (303)
+++|+|++++++ +++.|+.|++||........... +...+.+++|+|++. ..+++++.++.|++||+.+++....
T Consensus 78 ~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~---~~~~~~~~~~s~dg~-~l~~~~~~~~~v~~~d~~~~~~~~~ 153 (391)
T 1l0q_A 78 GVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK---TGKSPLGLALSPDGK-KLYVTNNGDKTVSVINTVTKAVINT 153 (391)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE---CSSSEEEEEECTTSS-EEEEEETTTTEEEEEETTTTEEEEE
T ss_pred ceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEe---CCCCcceEEECCCCC-EEEEEeCCCCEEEEEECCCCcEEEE
Confidence 999999999775 45567999999987543322221 223578999999862 2447888899999999999988887
Q ss_pred EcCCCCCeeEEEECCCCCEE-EEEeCCCeEEEEeCCCCceEEEecCCCeEEEEEEcCCCeEEEEE----cCCcEEEEeCC
Q 048118 165 LAGHTGYVNTVAVSPDGSLC-ASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAA----TEQSIKIWDLE 239 (303)
Q Consensus 165 ~~~~~~~i~~~~~~~~~~~l-~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~----~~~~i~iwd~~ 239 (303)
+..+. .+..++|+|+++.+ ++++.++.|++||+++++.+..+.....+.+++|+|++..++++ .++.|++||++
T Consensus 154 ~~~~~-~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~ 232 (391)
T 1l0q_A 154 VSVGR-SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTG 232 (391)
T ss_dssp EECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETT
T ss_pred EecCC-CcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECC
Confidence 77654 56899999999887 56778999999999999888888777889999999998655544 47899999999
Q ss_pred CCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEE-EEeecCCeEEEEecc
Q 048118 240 SKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTL-FSGYTDGVIRVWGIG 301 (303)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l-~~gs~Dg~v~~w~~~ 301 (303)
+++.+..+... ..+..++|+|++++| ++++.|+.|++||+.
T Consensus 233 ~~~~~~~~~~~---------------------~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~ 274 (391)
T 1l0q_A 233 TNKITARIPVG---------------------PDPAGIAVTPDGKKVYVALSFXNTVSVIDTA 274 (391)
T ss_dssp TTEEEEEEECC---------------------SSEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred CCeEEEEEecC---------------------CCccEEEEccCCCEEEEEcCCCCEEEEEECC
Confidence 88766544321 123678999999977 677899999999985
No 113
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.96 E-value=1.9e-26 Score=200.34 Aligned_cols=233 Identities=20% Similarity=0.380 Sum_probs=180.3
Q ss_pred eeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEeeCCCEEE
Q 048118 18 VTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSIDNRQIV 97 (303)
Q Consensus 18 v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~~~~~l~ 97 (303)
.+.|+|++. ++|++| .|++|+|||...+... ..+ .+.+|...|++++|+|+|.+|+
T Consensus 108 ~~~l~wS~~--n~lAvg-ld~tV~lWd~~tg~~~-----~~~----------------~~~~~~~~V~sv~fspdg~~la 163 (420)
T 4gga_A 108 LNLVDWSSG--NVLAVA-LDNSVYLWSASSGDIL-----QLL----------------QMEQPGEYISSVAWIKEGNYLA 163 (420)
T ss_dssp CBCEEECTT--SEEEEE-ETTEEEEEETTTCCEE-----EEE----------------ECCSTTCCEEEEEECTTSSEEE
T ss_pred ceeEEECCC--CEEEEE-eCCEEEEEECCCCCEE-----EEE----------------EecCCCCcEEEEEECCCCCEEE
Confidence 346888854 566665 5999999998754321 111 1235778899999999999999
Q ss_pred EEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCc-eeEEEEcCCCCCeeEEE
Q 048118 98 SASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNC-KLRATLAGHTGYVNTVA 176 (303)
Q Consensus 98 t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~i~~~~ 176 (303)
+|+.|+.|++||....... .....|...+.++.+++ ..+++|+.|+.+++||.... .....+.+|...+..+.
T Consensus 164 sgs~Dg~v~iWd~~~~~~~--~~~~~h~~~v~~~s~~~----~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~ 237 (420)
T 4gga_A 164 VGTSSAEVQLWDVQQQKRL--RNMTSHSARVGSLSWNS----YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLR 237 (420)
T ss_dssp EEETTSCEEEEETTTTEEE--EEECCCSSCEEEEEEET----TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEE
T ss_pred EEECCCeEEEEEcCCCcEE--EEEeCCCCceEEEeeCC----CEEEEEeCCCceeEeeecccceeeEEecccccceeeee
Confidence 9999999999998654332 23356788899998875 37999999999999998764 45677889999999999
Q ss_pred ECCCCCEEEEEeCCCeEEEEeCCCCce----EEE-ecCCCeEEEEEEcCCC-eEEEEE---cCCcEEEEeCCCCceeeee
Q 048118 177 VSPDGSLCASGGKDGVILLWDLAEGKR----LYS-LDAGAVIHALCFSPNR-YWLCAA---TEQSIKIWDLESKSIVEDL 247 (303)
Q Consensus 177 ~~~~~~~l~~~~~d~~v~iwd~~~~~~----~~~-~~~~~~v~~~~~s~~~-~~l~~~---~~~~i~iwd~~~~~~~~~~ 247 (303)
++|+++++++++.|+.+++|+...++. +.. ......|.+++|+|.+ .+++++ .|+.|++||+++++....+
T Consensus 238 ~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~ 317 (420)
T 4gga_A 238 WAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV 317 (420)
T ss_dssp ECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEE
T ss_pred ecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceee
Confidence 999999999999999999999987653 222 2446789999999975 454432 4899999999998876544
Q ss_pred eeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEee--cCCeEEEEecc
Q 048118 248 KVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGY--TDGVIRVWGIG 301 (303)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs--~Dg~v~~w~~~ 301 (303)
.. ...+.++.|+|++..+++++ .||.|++||+.
T Consensus 318 ~~---------------------~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~ 352 (420)
T 4gga_A 318 DA---------------------HSQVCSILWSPHYKELISGHGFAQNQLVIWKYP 352 (420)
T ss_dssp EC---------------------SSCEEEEEEETTTTEEEEEECTTTCCEEEEETT
T ss_pred cc---------------------ccceeeeeecCCCCeEEEEEecCCCEEEEEECC
Confidence 32 12356788999999887654 79999999974
No 114
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.96 E-value=7.2e-28 Score=204.49 Aligned_cols=222 Identities=18% Similarity=0.215 Sum_probs=165.9
Q ss_pred eecccCCEEEEEEeeC---CCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEE
Q 048118 77 FVGHTKDVLSVAFSID---NRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKV 153 (303)
Q Consensus 77 ~~~h~~~i~~i~~~~~---~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~i 153 (303)
+.+|.+.|.+++|+|+ |.+|++++.|+.|++|++.............|...|.+++|+|++ ..+++++.||.|++
T Consensus 35 ~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~l~s~~~dg~v~i 112 (368)
T 3mmy_A 35 TSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDG--SKVFTASCDKTAKM 112 (368)
T ss_dssp SSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTS--SEEEEEETTSEEEE
T ss_pred ccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCC--CEEEEEcCCCcEEE
Confidence 4579999999999999 599999999999999998642222112223578889999999975 57999999999999
Q ss_pred EECCCceeEEEEcCCCCCeeEEEE--CCCCCEEEEEeCCCeEEEEeCCCCceEEEecCCCeEEEEEEcCCCeEEEEEcCC
Q 048118 154 WNLSNCKLRATLAGHTGYVNTVAV--SPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAATEQ 231 (303)
Q Consensus 154 wd~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~ 231 (303)
||+.+++... +..|...|++++| +|++++|++++.|+.|++||+++++.+..+.....+.++.+.++ .+++++.++
T Consensus 113 wd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 190 (368)
T 3mmy_A 113 WDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYP-MAVVATAER 190 (368)
T ss_dssp EETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETT-EEEEEEGGG
T ss_pred EEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCC-eeEEEeCCC
Confidence 9999888665 5568999999999 99999999999999999999999988888877777777777754 556677788
Q ss_pred cEEEEeCCCCceeeeeee------------c---------ccccccc-------ccCc---cceeeccccce--------
Q 048118 232 SIKIWDLESKSIVEDLKV------------D---------LKTEAEK-------SEAT---TATTTIKKKNI-------- 272 (303)
Q Consensus 232 ~i~iwd~~~~~~~~~~~~------------~---------~~~~~~~-------~~~~---~~~~~~~~~~~-------- 272 (303)
.+.+|+++.......... . +...... .... .....+..+..
T Consensus 191 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (368)
T 3mmy_A 191 GLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAP 270 (368)
T ss_dssp CEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCC
T ss_pred cEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeeccccccccc
Confidence 899998876432211000 0 0000000 0000 11112223332
Q ss_pred ----eEEEEEEcCCCCEEEEeecCCeEEEEeccc
Q 048118 273 ----YCTSLNWSVDGSTLFSGYTDGVIRVWGIGR 302 (303)
Q Consensus 273 ----~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~~ 302 (303)
.+.+++|+|++++|++|+.||.|++||+..
T Consensus 271 ~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~ 304 (368)
T 3mmy_A 271 QDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDA 304 (368)
T ss_dssp EEECCEEEEEECTTTCCEEEEETTSCEEEEETTT
T ss_pred ccccceEEEEEecCCCEEEEEccCCeEEEEECCC
Confidence 588999999999999999999999999853
No 115
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.2e-27 Score=222.20 Aligned_cols=209 Identities=21% Similarity=0.331 Sum_probs=167.9
Q ss_pred eecccCCEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEEC
Q 048118 77 FVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNL 156 (303)
Q Consensus 77 ~~~h~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~ 156 (303)
+.+|.+.|++++|+|++.++++|+.|+.|++|+..+...........|...|.+++|+|+.....+++|+.||.|++||+
T Consensus 5 l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~ 84 (753)
T 3jro_A 5 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKE 84 (753)
T ss_dssp ---CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEE
T ss_pred cccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEEC
Confidence 46899999999999999999999999999999986433333444457889999999998733368999999999999999
Q ss_pred CCce--eEEEEcCCCCCeeEEEECCC--CCEEEEEeCCCeEEEEeCCCCce---EEEecCCCeEEEEEEcC---------
Q 048118 157 SNCK--LRATLAGHTGYVNTVAVSPD--GSLCASGGKDGVILLWDLAEGKR---LYSLDAGAVIHALCFSP--------- 220 (303)
Q Consensus 157 ~~~~--~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~v~iwd~~~~~~---~~~~~~~~~v~~~~~s~--------- 220 (303)
.+++ ....+.+|...|++++|+|+ ++.+++|+.||.|++||++++.. .........+.+++|+|
T Consensus 85 ~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~ 164 (753)
T 3jro_A 85 ENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEH 164 (753)
T ss_dssp ETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-------
T ss_pred CCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccccccc
Confidence 8876 66778889999999999999 99999999999999999987632 22224567899999999
Q ss_pred ----CC-eEEEEEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCC---CCEEEEeecC
Q 048118 221 ----NR-YWLCAATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVD---GSTLFSGYTD 292 (303)
Q Consensus 221 ----~~-~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~---~~~l~~gs~D 292 (303)
++ .+++++.||.|++||++++...... ...+..|...+.+++|+|+ +.+|++|+.|
T Consensus 165 ~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~----------------~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~D 228 (753)
T 3jro_A 165 NGTKESRKFVTGGADNLVKIWKYNSDAQTYVL----------------ESTLEGHSDWVRDVAWSPTVLLRSYLASVSQD 228 (753)
T ss_dssp --CGGGCCEEEEETTSCEEEEEEETTTTEEEE----------------EEEECCCSSCEEEEEECCCCSSSEEEEEEESS
T ss_pred ccCCCCCEEEEEECCCeEEEEeccCCccccee----------------eeeecCCCCcEEEEEeccCCCCCCEEEEEecC
Confidence 34 4556677999999999765322111 1223445667889999999 8999999999
Q ss_pred CeEEEEecc
Q 048118 293 GVIRVWGIG 301 (303)
Q Consensus 293 g~v~~w~~~ 301 (303)
|.|++||+.
T Consensus 229 g~I~iwd~~ 237 (753)
T 3jro_A 229 RTCIIWTQD 237 (753)
T ss_dssp SCEEEEEES
T ss_pred CEEEEecCC
Confidence 999999985
No 116
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.9e-27 Score=200.80 Aligned_cols=202 Identities=17% Similarity=0.265 Sum_probs=164.6
Q ss_pred ceecccCCEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEE
Q 048118 76 QFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWN 155 (303)
Q Consensus 76 ~~~~h~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd 155 (303)
.+.+|.+.|.+++|+|++.+|++++.|+.|++||...... ......|...|.+++|+|++ ..+++++.|+.|++||
T Consensus 27 ~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~--~~~~~~h~~~v~~~~~~~~~--~~l~s~~~dg~i~iwd 102 (369)
T 3zwl_B 27 KLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGER--LGTLDGHTGTIWSIDVDCFT--KYCVTGSADYSIKLWD 102 (369)
T ss_dssp EEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCE--EEEECCCSSCEEEEEECTTS--SEEEEEETTTEEEEEE
T ss_pred EEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchh--hhhhhhcCCcEEEEEEcCCC--CEEEEEeCCCeEEEEE
Confidence 3678999999999999999999999999999999865332 22234678889999999975 5899999999999999
Q ss_pred CCCceeEEEEcCCCCCeeEEEECCCCCEEEEEeCC-----CeEEEEeCCCCceE-----------EEe-cC--CCeEEEE
Q 048118 156 LSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKD-----GVILLWDLAEGKRL-----------YSL-DA--GAVIHAL 216 (303)
Q Consensus 156 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~v~iwd~~~~~~~-----------~~~-~~--~~~v~~~ 216 (303)
+.+++....+. +...+.+++|+|+++++++++.+ +.|++||+..+... ..+ .. ...+.++
T Consensus 103 ~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (369)
T 3zwl_B 103 VSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVA 181 (369)
T ss_dssp TTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEE
T ss_pred CCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEE
Confidence 99998888777 78899999999999999999998 99999999765321 111 11 2289999
Q ss_pred EEcCCCeEEE-EEcCCcEEEEeCCC-CceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCe
Q 048118 217 CFSPNRYWLC-AATEQSIKIWDLES-KSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGV 294 (303)
Q Consensus 217 ~~s~~~~~l~-~~~~~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~ 294 (303)
+|+|++.+++ ++.++.|++||+++ .+.+..+. .+...+.+++|+|++.+|++++.||.
T Consensus 182 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--------------------~~~~~v~~~~~~~~~~~l~~~~~d~~ 241 (369)
T 3zwl_B 182 GWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSID--------------------LHEKSISDMQFSPDLTYFITSSRDTN 241 (369)
T ss_dssp EECGGGCEEEEEETTSEEEEEETTTTTEEEEEEE--------------------CCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEe--------------------cCCCceeEEEECCCCCEEEEecCCce
Confidence 9999986655 55689999999987 44443322 23345678999999999999999999
Q ss_pred EEEEeccc
Q 048118 295 IRVWGIGR 302 (303)
Q Consensus 295 v~~w~~~~ 302 (303)
|++||+..
T Consensus 242 i~v~d~~~ 249 (369)
T 3zwl_B 242 SFLVDVST 249 (369)
T ss_dssp EEEEETTT
T ss_pred EEEEECCC
Confidence 99999853
No 117
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.96 E-value=1.9e-27 Score=201.86 Aligned_cols=211 Identities=18% Similarity=0.262 Sum_probs=163.4
Q ss_pred ccCCEEEEEEeeC----CCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcC-CCCCCEEEEEeCCCcEEEE
Q 048118 80 HTKDVLSVAFSID----NRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSP-NTLQPTIVSASWDRTVKVW 154 (303)
Q Consensus 80 h~~~i~~i~~~~~----~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~dg~i~iw 154 (303)
|...|.+++|+|+ +.+|++++.|+.|++||........ ....|...|.+++|+| ++ ..+++++.||.|++|
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~--~~l~s~~~dg~i~iw 143 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIK--HYVGHGNAINELKFHPRDP--NLLLSVSKDHALRLW 143 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEE--EEESCCSCEEEEEECSSCT--TEEEEEETTSCEEEE
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEee--eecCCCCcEEEEEECCCCC--CEEEEEeCCCeEEEE
Confidence 6678999999999 6799999999999999986433222 2235788899999999 54 589999999999999
Q ss_pred ECCCceeEEEE---cCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEec-----------------------
Q 048118 155 NLSNCKLRATL---AGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLD----------------------- 208 (303)
Q Consensus 155 d~~~~~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~----------------------- 208 (303)
|+++++....+ ..|...|.+++|+|++++|++++.||.|++||+++++.+..+.
T Consensus 144 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (366)
T 3k26_A 144 NIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPD 223 (366)
T ss_dssp ETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCS
T ss_pred EeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCc
Confidence 99999888888 6899999999999999999999999999999998765433221
Q ss_pred ------CCCeEEEEEEcCCCeEEEEEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCC
Q 048118 209 ------AGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVD 282 (303)
Q Consensus 209 ------~~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~ 282 (303)
....|.+++|+ ...+++++.++.|++||+++.+...... ............+..+...+..++|+|+
T Consensus 224 ~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 296 (366)
T 3k26_A 224 FSTRDIHRNYVDCVRWL-GDLILSKSCENAIVCWKPGKMEDDIDKI------KPSESNVTILGRFDYSQCDIWYMRFSMD 296 (366)
T ss_dssp EEECSSCSSCCCEEEEE-TTEEEEECSSSEEEEEEESSTTCCGGGC------CTTCCCEEEEEEEECSSCCSSCCCCEEC
T ss_pred cccccCCcceEEEEEEc-CCEEEEEecCCEEEEEeCCCcccccccc------ccCCcchheeccccccCCcEEEEEEcCC
Confidence 45678999998 4566667789999999987764311100 0000111112233444455677889999
Q ss_pred --CCEEEEeecCCeEEEEecc
Q 048118 283 --GSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 283 --~~~l~~gs~Dg~v~~w~~~ 301 (303)
+.+|++|+.||.|++||+.
T Consensus 297 ~~~~~l~~~~~dg~i~vwd~~ 317 (366)
T 3k26_A 297 FWQKMLALGNQVGKLYVWDLE 317 (366)
T ss_dssp TTSSEEEEECTTSCEEEEECC
T ss_pred CCCcEEEEEecCCcEEEEECC
Confidence 9999999999999999985
No 118
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.96 E-value=3e-27 Score=200.07 Aligned_cols=205 Identities=17% Similarity=0.255 Sum_probs=162.8
Q ss_pred cccCCEEEEEEeeC---CCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEc------CCCCCCEEEEEeCCC
Q 048118 79 GHTKDVLSVAFSID---NRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFS------PNTLQPTIVSASWDR 149 (303)
Q Consensus 79 ~h~~~i~~i~~~~~---~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~~~~dg 149 (303)
+|...|.+++|+|+ +.++++++.|+.|++|+...... .......|...|.++.|. |++ ..+++++.|+
T Consensus 63 ~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~s~~~--~~l~~~~~d~ 139 (357)
T 3i2n_A 63 EKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEM-PVYSVKGHKEIINAIDGIGGLGIGEGA--PEIVTGSRDG 139 (357)
T ss_dssp EESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSS-CSEEECCCSSCEEEEEEESGGGCC-CC--CEEEEEETTS
T ss_pred cccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCc-cEEEEEecccceEEEeeccccccCCCc--cEEEEEeCCC
Confidence 78899999999998 69999999999999999865431 122234678889999664 443 5899999999
Q ss_pred cEEEEECCCce-eEEEEcCCCC----CeeEEE----ECCCCCEEEEEeCCCeEEEEeCCCCceEEEecCCCeEEEEEEcC
Q 048118 150 TVKVWNLSNCK-LRATLAGHTG----YVNTVA----VSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSP 220 (303)
Q Consensus 150 ~i~iwd~~~~~-~~~~~~~~~~----~i~~~~----~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~ 220 (303)
.|++||+.+++ ....+..|.+ .+.+++ |+|++++|++++.|+.|++||+++++..........+.+++|+|
T Consensus 140 ~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~ 219 (357)
T 3i2n_A 140 TVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDR 219 (357)
T ss_dssp CEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESC
T ss_pred eEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCC
Confidence 99999998876 6677765554 788888 78999999999999999999999998877777778999999999
Q ss_pred ---CCeE-EEEEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCC-EEEEeecCCeE
Q 048118 221 ---NRYW-LCAATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGS-TLFSGYTDGVI 295 (303)
Q Consensus 221 ---~~~~-l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~-~l~~gs~Dg~v 295 (303)
++.+ ++++.++.|++||+++++.+..+.. .....+...+.+++|+|+++ +|++|+.||.|
T Consensus 220 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---------------~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 284 (357)
T 3i2n_A 220 KDISMNKLVATSLEGKFHVFDMRTQHPTKGFAS---------------VSEKAHKSTVWQVRHLPQNRELFLTAGGAGGL 284 (357)
T ss_dssp SSSSCCEEEEEESTTEEEEEEEEEEETTTEEEE---------------EEEECCSSCEEEEEEETTEEEEEEEEETTSEE
T ss_pred CCCCCCEEEEECCCCeEEEEeCcCCCcccceee---------------eccCCCcCCEEEEEECCCCCcEEEEEeCCCcE
Confidence 6654 4556799999999876544332221 01224555678899999998 89999999999
Q ss_pred EEEecc
Q 048118 296 RVWGIG 301 (303)
Q Consensus 296 ~~w~~~ 301 (303)
++||+.
T Consensus 285 ~iwd~~ 290 (357)
T 3i2n_A 285 HLWKYE 290 (357)
T ss_dssp EEEEEE
T ss_pred EEeecC
Confidence 999985
No 119
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.96 E-value=4.2e-27 Score=205.09 Aligned_cols=220 Identities=24% Similarity=0.418 Sum_probs=172.5
Q ss_pred eeecccccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCE
Q 048118 5 LVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDV 84 (303)
Q Consensus 5 ~~~~~~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i 84 (303)
......+.+|...|++++|+|.+..+|++|+.||+|++|++......... +.+...+.+|...|
T Consensus 171 ~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~----------------~~~~~~~~~h~~~v 234 (430)
T 2xyi_A 171 CQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRV----------------IDAKNIFTGHTAVV 234 (430)
T ss_dssp CCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGE----------------EECSEEECCCSSCE
T ss_pred CCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCce----------------eccceeecCCCCCE
Confidence 44556788999999999999987669999999999999999753221110 00112355789999
Q ss_pred EEEEEee-CCCEEEEEeCCCcEEEEecCCce-eeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCC-cee
Q 048118 85 LSVAFSI-DNRQIVSASRDRTIKLWNTLGEC-KYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSN-CKL 161 (303)
Q Consensus 85 ~~i~~~~-~~~~l~t~~~d~~i~vw~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~-~~~ 161 (303)
.+++|+| ++.+|++++.|+.|++||+.... .........|...|.+++|+|++ ...+++|+.||.|++||+++ .+.
T Consensus 235 ~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~-~~~l~tg~~dg~v~vwd~~~~~~~ 313 (430)
T 2xyi_A 235 EDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYS-EFILATGSADKTVALWDLRNLKLK 313 (430)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSC-TTEEEEEETTSEEEEEETTCTTSC
T ss_pred eeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCC-CCEEEEEeCCCeEEEEeCCCCCCC
Confidence 9999999 67899999999999999986431 11112223577889999999976 34789999999999999987 566
Q ss_pred EEEEcCCCCCeeEEEECCCCC-EEEEEeCCCeEEEEeCCC--------------CceEEEec-CCCeEEEEEEcCCCe-E
Q 048118 162 RATLAGHTGYVNTVAVSPDGS-LCASGGKDGVILLWDLAE--------------GKRLYSLD-AGAVIHALCFSPNRY-W 224 (303)
Q Consensus 162 ~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~v~iwd~~~--------------~~~~~~~~-~~~~v~~~~~s~~~~-~ 224 (303)
...+..|...|++++|+|+++ +|++++.|++|++||+.. .+.+.... +...|++++|+|++. +
T Consensus 314 ~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~ 393 (430)
T 2xyi_A 314 LHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWI 393 (430)
T ss_dssp SEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTE
T ss_pred eEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCE
Confidence 788888999999999999885 789999999999999986 24444443 356799999999986 4
Q ss_pred -EEEEcCCcEEEEeCCCC
Q 048118 225 -LCAATEQSIKIWDLESK 241 (303)
Q Consensus 225 -l~~~~~~~i~iwd~~~~ 241 (303)
++++.|+.|++|++...
T Consensus 394 l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 394 ICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp EEEEETTSEEEEEEECHH
T ss_pred EEEEECCCCEEEeEcccc
Confidence 45567999999998654
No 120
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.96 E-value=3.1e-26 Score=197.23 Aligned_cols=218 Identities=22% Similarity=0.314 Sum_probs=168.3
Q ss_pred eecccCCEEEEEEee-CCCEEEEEeCCCcEEEEecCCceeeeee-----------cCCCCccceEEEEEcCCCCCCEEEE
Q 048118 77 FVGHTKDVLSVAFSI-DNRQIVSASRDRTIKLWNTLGECKYTIQ-----------EGDAHTEWVSCVRFSPNTLQPTIVS 144 (303)
Q Consensus 77 ~~~h~~~i~~i~~~~-~~~~l~t~~~d~~i~vw~~~~~~~~~~~-----------~~~~~~~~i~~~~~~~~~~~~~~~~ 144 (303)
+.+|.+.|.+++|+| ++.+|++++.|+.|++|+.......... ....|...|.+++|+|+. ...+++
T Consensus 39 ~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~s 117 (408)
T 4a11_B 39 ERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHD-TGMFTS 117 (408)
T ss_dssp CCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTC-TTCEEE
T ss_pred eeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCC-CcEEEE
Confidence 356999999999999 9999999999999999998543221111 112478889999999954 247899
Q ss_pred EeCCCcEEEEECCCceeEEEEcCCCCCeeEEEECCCC---CEEEEEeCCCeEEEEeCCCCceEEEec-CCCeEEEEEEcC
Q 048118 145 ASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDG---SLCASGGKDGVILLWDLAEGKRLYSLD-AGAVIHALCFSP 220 (303)
Q Consensus 145 ~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~---~~l~~~~~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~s~ 220 (303)
++.|+.|++||+.+++....+. +...+.++.++|.+ .++++++.|+.|++||+++++.+..+. ....+.+++|+|
T Consensus 118 ~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~ 196 (408)
T 4a11_B 118 SSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSP 196 (408)
T ss_dssp EETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECS
T ss_pred EeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECC
Confidence 9999999999999988877766 67789999999854 499999999999999999988877775 467899999999
Q ss_pred CCe--EEEEEcCCcEEEEeCCCCce-eeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEE
Q 048118 221 NRY--WLCAATEQSIKIWDLESKSI-VEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRV 297 (303)
Q Consensus 221 ~~~--~l~~~~~~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~ 297 (303)
++. +++++.|+.|++||++++.. +..+.... .............+...+.+++|+|++.+|++|+.||.|++
T Consensus 197 ~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v 271 (408)
T 4a11_B 197 RYDYILATASADSRVKLWDVRRASGCLITLDQHN-----GKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRL 271 (408)
T ss_dssp SCTTEEEEEETTSCEEEEETTCSSCCSEECCTTT-----TCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred CCCcEEEEEcCCCcEEEEECCCCCcccccccccc-----cccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEE
Confidence 975 44667799999999987652 22221100 00011111222445667889999999999999999999999
Q ss_pred Eecc
Q 048118 298 WGIG 301 (303)
Q Consensus 298 w~~~ 301 (303)
||+.
T Consensus 272 wd~~ 275 (408)
T 4a11_B 272 WNSS 275 (408)
T ss_dssp EETT
T ss_pred EECC
Confidence 9985
No 121
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=1e-26 Score=200.26 Aligned_cols=288 Identities=12% Similarity=0.068 Sum_probs=167.0
Q ss_pred ccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCcccc--ce--eeeeecCCCcceEEEEeCCCCc--eecccCCE
Q 048118 11 MRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTY--GV--ARRRLTGHSHFVQDVVLSSDGQ--FVGHTKDV 84 (303)
Q Consensus 11 ~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~--~~--~~~~~~~~~~~i~~~~~~~~~~--~~~h~~~i 84 (303)
++.+...+.-....|...++++ ++.|+.|++|+........ +. .....-.+...+..+.+.+... ...|...+
T Consensus 14 l~~~p~~~~w~~~~~~~~~l~a-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (393)
T 4gq1_A 14 LNVRPYTTTWCSQSPSCSNLLA-IGHDTGITIYCASEEQTPGSTGLTLQELFTIQTGLPTLHLSFSSSCSYSENLHDGDG 92 (393)
T ss_dssp TTCCEEEEEECTTSGGGTTEEE-EEESSEEEEEEEEECCSSSCCSEEEEEEEEEECSSCEEEEEECTTCEEECC------
T ss_pred CCCCCeEEEEeCCCCCCCCEEE-EECCCCEEEEECCCCCcccccccceeeeEEEecCCCeeeEeecCCccccccccCCCc
Confidence 4444433333334555555544 5567889999875432110 11 1111112334455555554332 22455556
Q ss_pred EEEEEeeCCCEEEEEeCCCcEEEEecCCceee---eeecCCCCccceEEEEEcCCC------CCCEEEEEeCCCcEEEEE
Q 048118 85 LSVAFSIDNRQIVSASRDRTIKLWNTLGECKY---TIQEGDAHTEWVSCVRFSPNT------LQPTIVSASWDRTVKVWN 155 (303)
Q Consensus 85 ~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~------~~~~~~~~~~dg~i~iwd 155 (303)
....+.+++.++++++.|++|+|||....... ......+|...|.+++|+|.. ....|++++.|++|++||
T Consensus 93 ~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd 172 (393)
T 4gq1_A 93 NVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWR 172 (393)
T ss_dssp ----CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEE
T ss_pred ceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEE
Confidence 66667778889999999999999997654322 233456799999999999721 124799999999999999
Q ss_pred CCCceeEEEEcCCCCCeeEEEECCCCC-EEEEEeCCCeEEEEeCCCCceEEEec--------------------------
Q 048118 156 LSNCKLRATLAGHTGYVNTVAVSPDGS-LCASGGKDGVILLWDLAEGKRLYSLD-------------------------- 208 (303)
Q Consensus 156 ~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~-------------------------- 208 (303)
+.++.....+..|...+.+++|+|++. +|++++.|++|++||+++++......
T Consensus 173 ~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 252 (393)
T 4gq1_A 173 LTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSG 252 (393)
T ss_dssp EETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------C
T ss_pred CCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccc
Confidence 988877777788889999999999874 79999999999999998876432211
Q ss_pred CCCeEEEEEEc-CCCeEE-EEEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcC--CCC
Q 048118 209 AGAVIHALCFS-PNRYWL-CAATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSV--DGS 284 (303)
Q Consensus 209 ~~~~v~~~~~s-~~~~~l-~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp--~~~ 284 (303)
....+.++.|+ |++..+ +++.|+.+++||+..++....+............. ........ ..+.....|+| ++.
T Consensus 253 ~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~ 330 (393)
T 4gq1_A 253 IASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLL-PNVQGISL-FPSLLGACPHPRYMDY 330 (393)
T ss_dssp CSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCS-CSEEEECS-SCCSSCCEECSSCTTE
T ss_pred ccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEc-cccccccc-cCcceeEEEccCCCCE
Confidence 12346677776 676554 55678999999998776554443211110000000 00000011 11112233444 344
Q ss_pred EEEEeecCCeEEEEecc
Q 048118 285 TLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 285 ~l~~gs~Dg~v~~w~~~ 301 (303)
++++|+.||+|++||+.
T Consensus 331 ~~~sgs~Dg~V~lwd~~ 347 (393)
T 4gq1_A 331 FATAHSQHGLIQLINTY 347 (393)
T ss_dssp EEEEETTTTEEEEEETT
T ss_pred EEEEECCCCEEEEEECC
Confidence 67889999999999975
No 122
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.95 E-value=3.9e-25 Score=184.18 Aligned_cols=233 Identities=20% Similarity=0.376 Sum_probs=174.4
Q ss_pred eeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEeeCCCEEE
Q 048118 18 VTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSIDNRQIV 97 (303)
Q Consensus 18 v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~~~~~l~ 97 (303)
.++|+|+++ ++||+| .|++|+|||...++. ...+ ++.+|...|.+++|+|++++++
T Consensus 28 ~~~l~WS~~--~~lAvg-~D~tV~iWd~~tg~~-----~~~~----------------~~~~~~~~V~~v~~~~~~~~l~ 83 (318)
T 4ggc_A 28 LNLVDWSSG--NVLAVA-LDNSVYLWSASSGDI-----LQLL----------------QMEQPGEYISSVAWIKEGNYLA 83 (318)
T ss_dssp CBCEEECTT--SEEEEE-ETTEEEEEETTTCCE-----EEEE----------------ECCSTTCCEEEEEECTTSSEEE
T ss_pred ceEEEECCC--CEEEEE-eCCEEEEEECCCCCE-----EEEE----------------EecCCCCeEEEEEECCCCCEEE
Confidence 367899975 466655 599999999875432 1111 1235788899999999999999
Q ss_pred EEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCc-eeEEEEcCCCCCeeEEE
Q 048118 98 SASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNC-KLRATLAGHTGYVNTVA 176 (303)
Q Consensus 98 t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~i~~~~ 176 (303)
+|+.|+.|++|+........ ....|...+.++.+.+ ..+++++.++.+++|+.... .....+.+|...+..+.
T Consensus 84 sgs~Dg~v~iw~~~~~~~~~--~~~~h~~~~~~~~~~~----~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (318)
T 4ggc_A 84 VGTSSAEVQLWDVQQQKRLR--NMTSHSARVGSLSWNS----YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLR 157 (318)
T ss_dssp EEETTSEEEEEETTTTEEEE--EEECCSSCEEEEEEET----TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEE
T ss_pred EEECCCcEEEeecCCceeEE--EecCccceEEEeecCC----CEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEE
Confidence 99999999999986543322 2235667777776654 36899999999999998765 45667888999999999
Q ss_pred ECCCCCEEEEEeCCCeEEEEeCCCCceEE-----EecCCCeEEEEEEcCCC-eEEE--E-EcCCcEEEEeCCCCceeeee
Q 048118 177 VSPDGSLCASGGKDGVILLWDLAEGKRLY-----SLDAGAVIHALCFSPNR-YWLC--A-ATEQSIKIWDLESKSIVEDL 247 (303)
Q Consensus 177 ~~~~~~~l~~~~~d~~v~iwd~~~~~~~~-----~~~~~~~v~~~~~s~~~-~~l~--~-~~~~~i~iwd~~~~~~~~~~ 247 (303)
+++++++|++++.|++|++||+++++... .......+..++++|++ .++. . +.++.|++||.+........
T Consensus 158 ~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~ 237 (318)
T 4ggc_A 158 WAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV 237 (318)
T ss_dssp ECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEE
T ss_pred EcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccc
Confidence 99999999999999999999998765321 22345678999999875 3332 2 24688999999877654322
Q ss_pred eeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEe--ecCCeEEEEecc
Q 048118 248 KVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSG--YTDGVIRVWGIG 301 (303)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~g--s~Dg~v~~w~~~ 301 (303)
. +...+..+.|+|++..++++ +.||.|++||+.
T Consensus 238 ~---------------------~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~ 272 (318)
T 4ggc_A 238 D---------------------AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYP 272 (318)
T ss_dssp E---------------------CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETT
T ss_pred c---------------------ceeeeeeeeecccccceEEEEEcCCCEEEEEECC
Confidence 1 12234668899999887765 489999999985
No 123
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=1.3e-25 Score=185.04 Aligned_cols=214 Identities=17% Similarity=0.121 Sum_probs=150.3
Q ss_pred ceeeeecCCC---CCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCce----ecccCCEEEEEE
Q 048118 17 MVTAIATPID---NSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQF----VGHTKDVLSVAF 89 (303)
Q Consensus 17 ~v~~v~~~~~---~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----~~h~~~i~~i~~ 89 (303)
.|..++++|+ -+.++++++. .+++|.+..+ ........+|+..|.-..++++++. .+|...+..++|
T Consensus 113 ~v~sla~spd~~~~~~~l~s~g~--~~~v~~l~~g----~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~f 186 (356)
T 2w18_A 113 EIRALFCSSDDESEKQVLLKSGN--IKAVLGLTKR----RLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTF 186 (356)
T ss_dssp EEEEECC------CCEEEEEEEE--EEEEEEETTT----EEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEE
T ss_pred ceEEEEECCCccccccEEEeCCC--eEEEEecCCC----cEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEe
Confidence 4555566654 0356777664 4888987432 1122224678999999999998865 478889999999
Q ss_pred ee---CCCEEEEEeCCCcEEEEecCCc-eeeeeecCCCCccceEEEEEcCCCCCC----------EEEEEeCCCcEEEEE
Q 048118 90 SI---DNRQIVSASRDRTIKLWNTLGE-CKYTIQEGDAHTEWVSCVRFSPNTLQP----------TIVSASWDRTVKVWN 155 (303)
Q Consensus 90 ~~---~~~~l~t~~~d~~i~vw~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~----------~~~~~~~dg~i~iwd 155 (303)
++ ++.+|++++.|++|+|||+... ....+.....+...+.+++|+|++... .+++|+.|++|++||
T Consensus 187 s~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd 266 (356)
T 2w18_A 187 AEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVIN 266 (356)
T ss_dssp EEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEE
T ss_pred eccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEE
Confidence 99 7799999999999999998743 334443222234467788999976210 136788999999999
Q ss_pred CCCceeEEEE-----cCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEecCC-C-eEEEEEEcCCCeEEEE-
Q 048118 156 LSNCKLRATL-----AGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAG-A-VIHALCFSPNRYWLCA- 227 (303)
Q Consensus 156 ~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~-~-~v~~~~~s~~~~~l~~- 227 (303)
..+++....+ .+|...+.+..++ +..+++++.|++|++||+.+++.+.++... . .+.+++|+|++.+|++
T Consensus 267 ~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSG 344 (356)
T 2w18_A 267 PKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAG 344 (356)
T ss_dssp TTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEE
T ss_pred CCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEE
Confidence 9998876654 3666655544444 788999999999999999999999998632 3 3456899999976654
Q ss_pred EcCCcEEEEeC
Q 048118 228 ATEQSIKIWDL 238 (303)
Q Consensus 228 ~~~~~i~iwd~ 238 (303)
+.|+.|++||+
T Consensus 345 S~D~TIklWd~ 355 (356)
T 2w18_A 345 QKDGNIFVYHY 355 (356)
T ss_dssp CTTSCEEEEEE
T ss_pred ECCCcEEEecC
Confidence 56999999995
No 124
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.95 E-value=1e-24 Score=187.21 Aligned_cols=223 Identities=15% Similarity=0.180 Sum_probs=171.3
Q ss_pred cEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEeeCCCEE-EEEeCCCcEEE
Q 048118 29 DMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSIDNRQI-VSASRDRTIKL 107 (303)
Q Consensus 29 ~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~~~~~l-~t~~~d~~i~v 107 (303)
.++++++.|+.|++||+..... ... +..| ..+.+++|+|+++++ ++++.|+.|++
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~-----~~~------------------~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v 58 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKV-----TAT------------------IPVG-SNPMGAVISPDGTKVYVANAHSNDVSI 58 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEE-----EEE------------------EECS-SSEEEEEECTTSSEEEEEEGGGTEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCeE-----EEE------------------eecC-CCcceEEECCCCCEEEEECCCCCeEEE
Confidence 4789999999999999865321 111 1223 457899999999876 67779999999
Q ss_pred EecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEEEcCCCCCeeEEEECCCCCEE-EE
Q 048118 108 WNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLC-AS 186 (303)
Q Consensus 108 w~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~ 186 (303)
||........... . ...+.+++|+|++. ..++++..++.|++||+.+++....+..+ ..+.+++|+|+++.+ ++
T Consensus 59 ~d~~~~~~~~~~~--~-~~~v~~~~~spdg~-~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~ 133 (391)
T 1l0q_A 59 IDTATNNVIATVP--A-GSSPQGVAVSPDGK-QVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVT 133 (391)
T ss_dssp EETTTTEEEEEEE--C-SSSEEEEEECTTSS-EEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEE
T ss_pred EECCCCeEEEEEE--C-CCCccceEECCCCC-EEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEE
Confidence 9986543322221 1 22789999999863 23455667799999999999888777754 468999999999977 67
Q ss_pred EeCCCeEEEEeCCCCceEEEecCCCeEEEEEEcCCCeEE-EE-EcCCcEEEEeCCCCceeeeeeeccccccccccCccce
Q 048118 187 GGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWL-CA-ATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTAT 264 (303)
Q Consensus 187 ~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~-~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (303)
++.|+.|++||+.+++.+..+.....+..++|+|++..+ ++ ..++.|++||+++++.+..+..
T Consensus 134 ~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~--------------- 198 (391)
T 1l0q_A 134 NNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKV--------------- 198 (391)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC---------------
T ss_pred eCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEec---------------
Confidence 788999999999999988888777778999999998655 33 4578999999998876544321
Q ss_pred eeccccceeEEEEEEcCCCCEEEEee---cCCeEEEEecc
Q 048118 265 TTIKKKNIYCTSLNWSVDGSTLFSGY---TDGVIRVWGIG 301 (303)
Q Consensus 265 ~~~~~~~~~~~~~~~sp~~~~l~~gs---~Dg~v~~w~~~ 301 (303)
...+..++|+|++++|++++ .|+.|++||+.
T Consensus 199 ------~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~ 232 (391)
T 1l0q_A 199 ------EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTG 232 (391)
T ss_dssp ------SSEEEEEEECTTSSEEEEEEECSSCCEEEEEETT
T ss_pred ------CCCccceEECCCCCEEEEEecCcCCCcEEEEECC
Confidence 12346789999999999888 69999999975
No 125
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.94 E-value=5.6e-25 Score=186.89 Aligned_cols=200 Identities=15% Similarity=0.161 Sum_probs=145.1
Q ss_pred eecccCCEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEEC
Q 048118 77 FVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNL 156 (303)
Q Consensus 77 ~~~h~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~ 156 (303)
+.+|.+.|.+++|+|+|.+|++|+.++ +++|+........... ...+..+.+.++. ...+++++.|+.|++||.
T Consensus 15 ~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~d~~v~iWd~ 88 (355)
T 3vu4_A 15 ENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQE----MRHLSKVRMLHRT-NYVAFVTGVKEVVHIWDD 88 (355)
T ss_dssp ----CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEE----CSCCCEEEECTTS-SEEEEECSSTTEEEEEET
T ss_pred cccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeee----cCCeEEEEEcCCC-CEEEEEECCccEEEEEEC
Confidence 356899999999999999999988765 7899976433222111 1136667777764 234467888899999999
Q ss_pred CCceeEEEEcCCCCCeeEEEECCCC-----------------------------------CEEEE--EeCCCeEEEEeCC
Q 048118 157 SNCKLRATLAGHTGYVNTVAVSPDG-----------------------------------SLCAS--GGKDGVILLWDLA 199 (303)
Q Consensus 157 ~~~~~~~~~~~~~~~i~~~~~~~~~-----------------------------------~~l~~--~~~d~~v~iwd~~ 199 (303)
.+++....+. +...|.+++++++. .++++ |+.||.|++||++
T Consensus 89 ~~~~~~~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~ 167 (355)
T 3vu4_A 89 VKKQDVSRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQ 167 (355)
T ss_dssp TTTEEEEEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECC
T ss_pred CCCcEEEEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECC
Confidence 9998887776 55688888887653 23333 4678888888887
Q ss_pred CCc---------------e-EEEe-cCCCeEEEEEEcCCCeEEEE-EcCCc-EEEEeCCCCceeeeeeeccccccccccC
Q 048118 200 EGK---------------R-LYSL-DAGAVIHALCFSPNRYWLCA-ATEQS-IKIWDLESKSIVEDLKVDLKTEAEKSEA 260 (303)
Q Consensus 200 ~~~---------------~-~~~~-~~~~~v~~~~~s~~~~~l~~-~~~~~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 260 (303)
+++ + +..+ .+...|.+++|+|++.++++ +.|+. |++||+++++.+..+..
T Consensus 168 ~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~----------- 236 (355)
T 3vu4_A 168 SSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRR----------- 236 (355)
T ss_dssp C------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEEC-----------
T ss_pred CCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEc-----------
Confidence 654 1 3344 34578999999999876655 56898 99999998877654431
Q ss_pred ccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEecc
Q 048118 261 TTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~ 301 (303)
..+...+.+++|+|++++|++|+.||+|++||+.
T Consensus 237 -------g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~ 270 (355)
T 3vu4_A 237 -------GLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIF 270 (355)
T ss_dssp -------TTCCSCEEEEEECTTSCEEEEEETTCEEEEEESS
T ss_pred -------CCCCCcEEEEEECCCCCEEEEEECCCEEEEEEcc
Confidence 0134567889999999999999999999999985
No 126
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.94 E-value=5.9e-24 Score=184.26 Aligned_cols=241 Identities=11% Similarity=0.111 Sum_probs=174.8
Q ss_pred ccccccccceeeeecCCC-------------CCcEEEEecCC------CcEEEEEcccCccccceeeeeecCCCcceEEE
Q 048118 9 GTMRAHTDMVTAIATPID-------------NSDMIVTASRD------KSIIVWHLTKEEKTYGVARRRLTGHSHFVQDV 69 (303)
Q Consensus 9 ~~~~~h~~~v~~v~~~~~-------------~~~~~~t~s~d------~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~ 69 (303)
..+.+|...+..+++.+. -...++.++.+ +.|++||...... .
T Consensus 111 ~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~------~------------ 172 (415)
T 2hqs_A 111 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQ------F------------ 172 (415)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSCSC------E------------
T ss_pred eEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCCCC------E------------
Confidence 346777777776666541 02456666654 7999999853211 0
Q ss_pred EeCCCCceecccCCEEEEEEeeCCCEEEEEeCCC---cEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEE-EE
Q 048118 70 VLSSDGQFVGHTKDVLSVAFSIDNRQIVSASRDR---TIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIV-SA 145 (303)
Q Consensus 70 ~~~~~~~~~~h~~~i~~i~~~~~~~~l~t~~~d~---~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~ 145 (303)
.+.+|...+.+++|+|+|++|++++.|+ .|++||+.+.....+. .+...+.+++|+|++. .++ ++
T Consensus 173 ------~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~---~~~~~~~~~~~spdg~--~la~~~ 241 (415)
T 2hqs_A 173 ------VVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVA---SFPRHNGAPAFSPDGS--KLAFAL 241 (415)
T ss_dssp ------EEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEE---CCSSCEEEEEECTTSS--EEEEEE
T ss_pred ------EEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEee---cCCCcccCEEEcCCCC--EEEEEE
Confidence 2346788999999999999999999885 9999998654333322 3455789999999873 454 66
Q ss_pred eCCCc--EEEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEeC-CC--eEEEEeCCCCceEEEecCCCeEEEEEEcC
Q 048118 146 SWDRT--VKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGK-DG--VILLWDLAEGKRLYSLDAGAVIHALCFSP 220 (303)
Q Consensus 146 ~~dg~--i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~--~v~iwd~~~~~~~~~~~~~~~v~~~~~s~ 220 (303)
+.++. |++||+.+++. ..+..|...+.+++|+|+|+.|++++. ++ +|.+||+.+++..........+.+++|+|
T Consensus 242 ~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~sp 320 (415)
T 2hqs_A 242 SKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSS 320 (415)
T ss_dssp CTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECT
T ss_pred ecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECC
Confidence 66655 99999988775 467778889999999999999988876 44 78888998776433233456788999999
Q ss_pred CCeEEEEEc-C---CcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCC---
Q 048118 221 NRYWLCAAT-E---QSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDG--- 293 (303)
Q Consensus 221 ~~~~l~~~~-~---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg--- 293 (303)
++.+|+.+. + ..|++||+++++... +. .+. .+.+++|+|+|++|++++.|+
T Consensus 321 dG~~l~~~~~~~g~~~i~~~d~~~~~~~~-l~--------------------~~~-~~~~~~~spdg~~l~~~s~~~~~~ 378 (415)
T 2hqs_A 321 DGKFMVMVSSNGGQQHIAKQDLATGGVQV-LS--------------------STF-LDETPSLAPNGTMVIYSSSQGMGS 378 (415)
T ss_dssp TSSEEEEEEECSSCEEEEEEETTTCCEEE-CC--------------------CSS-SCEEEEECTTSSEEEEEEEETTEE
T ss_pred CCCEEEEEECcCCceEEEEEECCCCCEEE-ec--------------------CCC-CcCCeEEcCCCCEEEEEEcCCCcc
Confidence 998776554 2 489999998876521 11 011 346789999999999988887
Q ss_pred eEEEEecc
Q 048118 294 VIRVWGIG 301 (303)
Q Consensus 294 ~v~~w~~~ 301 (303)
.|.+||+.
T Consensus 379 ~l~~~d~~ 386 (415)
T 2hqs_A 379 VLNLVSTD 386 (415)
T ss_dssp EEEEEETT
T ss_pred EEEEEECC
Confidence 79999874
No 127
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.92 E-value=8.3e-23 Score=177.65 Aligned_cols=197 Identities=14% Similarity=0.113 Sum_probs=156.9
Q ss_pred CCEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeee---cCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCC
Q 048118 82 KDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQ---EGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSN 158 (303)
Q Consensus 82 ~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~ 158 (303)
..+.+++|+|++.++++++.|+.|++||.......... ....|...+.+++|+|++ ..+++++.|+.|++||+++
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~s~~~d~~v~~~d~~~ 200 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHN--ELWVSQMQANAVHVFDLKT 200 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGT--EEEEEEGGGTEEEEEETTT
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCC--EEEEEECCCCEEEEEECCC
Confidence 34568999997778888888999999998643322211 123566789999998875 4788999999999999999
Q ss_pred ceeEEEEcCCCCCeeEEEECCCCCEEE-EEeCCCeEEEEeCCCCceEEEecCCCeEEEEEEcCCCeEEEEEc--------
Q 048118 159 CKLRATLAGHTGYVNTVAVSPDGSLCA-SGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAAT-------- 229 (303)
Q Consensus 159 ~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-------- 229 (303)
++....+..|...+.+++|+|+++.++ +++.|+.|++||+++++.+..+.....+.+++|+|++..++++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~ 280 (433)
T 3bws_A 201 LAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQES 280 (433)
T ss_dssp CCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCS
T ss_pred ceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCcccc
Confidence 888888888889999999999999875 45579999999999999888887778899999999986655443
Q ss_pred -CCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCE-EEEeecCCeEEEEecc
Q 048118 230 -EQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGST-LFSGYTDGVIRVWGIG 301 (303)
Q Consensus 230 -~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~-l~~gs~Dg~v~~w~~~ 301 (303)
++.|++||+++++.+..+.. ...+..++|+|+++. +++++.|+.|++||+.
T Consensus 281 ~dg~i~~~d~~~~~~~~~~~~---------------------~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~ 333 (433)
T 3bws_A 281 GGGRLGIYSMDKEKLIDTIGP---------------------PGNKRHIVSGNTENKIYVSDMCCSKIEVYDLK 333 (433)
T ss_dssp CCEEEEEEETTTTEEEEEEEE---------------------EECEEEEEECSSTTEEEEEETTTTEEEEEETT
T ss_pred CCCeEEEEECCCCcEEeeccC---------------------CCCcceEEECCCCCEEEEEecCCCEEEEEECC
Confidence 77999999998876543321 123467899999975 5677999999999985
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.92 E-value=4.3e-23 Score=178.86 Aligned_cols=238 Identities=14% Similarity=0.132 Sum_probs=167.1
Q ss_pred cceeeeecCCCCCcEEEEec----CCC----cEEEEEc--ccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEE
Q 048118 16 DMVTAIATPIDNSDMIVTAS----RDK----SIIVWHL--TKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVL 85 (303)
Q Consensus 16 ~~v~~v~~~~~~~~~~~t~s----~d~----~i~iw~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~ 85 (303)
..+....|.+.+.+++++|+ .|| ++++||+ ....... ... +.+|...+.
T Consensus 63 ~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~---~~~------------------~~~~~~~~~ 121 (415)
T 2hqs_A 63 QEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLA---QNS------------------YKVNKQWLR 121 (415)
T ss_dssp GGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEE---EEE------------------EEECGGGHH
T ss_pred cCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEe---eeE------------------EEcChhHHH
Confidence 45677788888888898987 567 8999998 6543211 111 223333333
Q ss_pred EEEEee--------------CCCEEEEEeCC------CcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEE
Q 048118 86 SVAFSI--------------DNRQIVSASRD------RTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSA 145 (303)
Q Consensus 86 ~i~~~~--------------~~~~l~t~~~d------~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 145 (303)
.+++++ .+..++.++.+ +.|++||..+.....+. .|...+.+++|+|++ ..++++
T Consensus 122 ~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~---~~~~~v~~~~~Spdg--~~la~~ 196 (415)
T 2hqs_A 122 YAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVH---RSPQPLMSPAWSPDG--SKLAYV 196 (415)
T ss_dssp HHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSCSCEEEE---EESSCEEEEEECTTS--SEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCCCCEEEe---CCCCcceeeEEcCCC--CEEEEE
Confidence 333332 25566666554 79999998754333332 356679999999987 468888
Q ss_pred eCCC---cEEEEECCCceeEEEEcCCCCCeeEEEECCCCCEEE-EEeCCC--eEEEEeCCCCceEEEecCCCeEEEEEEc
Q 048118 146 SWDR---TVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCA-SGGKDG--VILLWDLAEGKRLYSLDAGAVIHALCFS 219 (303)
Q Consensus 146 ~~dg---~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d~--~v~iwd~~~~~~~~~~~~~~~v~~~~~s 219 (303)
+.++ .|++||+.+++.. .+..|...+.+++|+|+|+.|+ +++.++ .|++||+.+++..........+.+++|+
T Consensus 197 s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~s 275 (415)
T 2hqs_A 197 TFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWF 275 (415)
T ss_dssp ECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEEC
T ss_pred EecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEEC
Confidence 8775 9999999988765 4667788999999999999887 666555 4999999887764333445678999999
Q ss_pred CCCeEEEEEc--CC--cEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecC---
Q 048118 220 PNRYWLCAAT--EQ--SIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTD--- 292 (303)
Q Consensus 220 ~~~~~l~~~~--~~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~D--- 292 (303)
|++..++.++ ++ .|++||+++++... + ..+...+.+++|+|+|++|++++.+
T Consensus 276 pdg~~l~~~s~~~g~~~i~~~d~~~~~~~~-l--------------------~~~~~~~~~~~~spdG~~l~~~~~~~g~ 334 (415)
T 2hqs_A 276 PDSQNLAFTSDQAGRPQVYKVNINGGAPQR-I--------------------TWEGSQNQDADVSSDGKFMVMVSSNGGQ 334 (415)
T ss_dssp TTSSEEEEEECTTSSCEEEEEETTSSCCEE-C--------------------CCSSSEEEEEEECTTSSEEEEEEECSSC
T ss_pred CCCCEEEEEECCCCCcEEEEEECCCCCEEE-E--------------------ecCCCcccCeEECCCCCEEEEEECcCCc
Confidence 9998666554 33 68888988765321 1 1112345678999999999988875
Q ss_pred CeEEEEecc
Q 048118 293 GVIRVWGIG 301 (303)
Q Consensus 293 g~v~~w~~~ 301 (303)
+.|++||+.
T Consensus 335 ~~i~~~d~~ 343 (415)
T 2hqs_A 335 QHIAKQDLA 343 (415)
T ss_dssp EEEEEEETT
T ss_pred eEEEEEECC
Confidence 589999974
No 129
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.91 E-value=3.4e-22 Score=173.96 Aligned_cols=214 Identities=11% Similarity=0.087 Sum_probs=153.9
Q ss_pred cceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEeeCCCE
Q 048118 16 DMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSIDNRQ 95 (303)
Q Consensus 16 ~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~~~~~ 95 (303)
..++.+++++.+ +++++++.|+ +++|+....... .....+...+. ...+ .....|.+.|.+++|+|++.+
T Consensus 37 ~~~n~lavs~~~-~~l~~~~~dg-v~v~~~~~~~~~-----~~~~~~~~~~~--~~~~-~~~~~~~~~v~~l~~spdg~~ 106 (434)
T 2oit_A 37 ERSSLLAVSNKY-GLVFAGGASG-LQIFPTKNLLIQ-----NKPGDDPNKIV--DKVQ-GLLVPMKFPIHHLALSCDNLT 106 (434)
T ss_dssp SCCBCEEEETTT-TEEEEEETTE-EEEEEHHHHCCC-----CCTTCCTTCEE--ECCC-CEEECCSSCEEEEEECTTSCE
T ss_pred CCccEEEEecCC-CEEEEECCCE-EEEEEchHhhhh-----cccccCccccc--ccCc-cccccCCCcccEEEEcCCCCE
Confidence 347788888765 5888888887 999986532110 00000000000 0001 112346778999999999999
Q ss_pred EE----EEeCCCcEEEEecCCc---------eeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeE
Q 048118 96 IV----SASRDRTIKLWNTLGE---------CKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLR 162 (303)
Q Consensus 96 l~----t~~~d~~i~vw~~~~~---------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~ 162 (303)
|+ +++.|+.|++||+... ..........|...|.+++|+|+. ...+++++.||.|++||++++...
T Consensus 107 lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~-~~~las~s~Dg~v~iwD~~~~~~~ 185 (434)
T 2oit_A 107 LSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTV-PSMVAVCLADGSIAVLQVTETVKV 185 (434)
T ss_dssp EEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSC-TTEEEEEETTSCEEEEEESSSEEE
T ss_pred EEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCC-CCEEEEEECCCeEEEEEcCCCcce
Confidence 99 8889999999997432 111233345678899999999974 357999999999999999988776
Q ss_pred EEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEecC--------CCeEEEEEEcCCCeEEEEEc--CC-
Q 048118 163 ATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDA--------GAVIHALCFSPNRYWLCAAT--EQ- 231 (303)
Q Consensus 163 ~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~--------~~~v~~~~~s~~~~~l~~~~--~~- 231 (303)
....+|...|++++|+|+|++|++|+.||+|++||++ ++....+.. ...+.+++|++++.++++.. +|
T Consensus 186 ~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~ 264 (434)
T 2oit_A 186 CATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGT 264 (434)
T ss_dssp EEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCC
T ss_pred eeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCc
Confidence 6667788999999999999999999999999999998 554444321 12789999999988775543 32
Q ss_pred -----cEEEEeCCCC
Q 048118 232 -----SIKIWDLESK 241 (303)
Q Consensus 232 -----~i~iwd~~~~ 241 (303)
.+++|+++..
T Consensus 265 ~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 265 LETSPDVVMALLPKK 279 (434)
T ss_dssp SSSCCEEEEEECCCT
T ss_pred cCCCCceEEEEeccC
Confidence 3899999765
No 130
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.90 E-value=1.8e-20 Score=157.04 Aligned_cols=252 Identities=12% Similarity=0.113 Sum_probs=166.0
Q ss_pred ccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEe
Q 048118 11 MRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFS 90 (303)
Q Consensus 11 ~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~ 90 (303)
+..+...+ .++++|++..+++++..++.|.+||....... .. .+..+..+..+++|+
T Consensus 36 ~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~----~~------------------~~~~~~~~~~~~~~s 92 (331)
T 3u4y_A 36 ITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPK----VV------------------AIQEGQSSMADVDIT 92 (331)
T ss_dssp EECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCE----EE------------------EEEECSSCCCCEEEC
T ss_pred EEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCcee----EE------------------ecccCCCCccceEEC
Confidence 34444556 89999987655666666899999998654320 11 112233444448999
Q ss_pred eCCCEEEEEeCCC---cEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCc-EEEEECCCceeE----
Q 048118 91 IDNRQIVSASRDR---TIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRT-VKVWNLSNCKLR---- 162 (303)
Q Consensus 91 ~~~~~l~t~~~d~---~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~-i~iwd~~~~~~~---- 162 (303)
|++++++++..++ .|.+||........... ......+++|+|++. ..+++...++. |.+|++......
T Consensus 93 ~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~---~~~~~~~~~~spdg~-~l~~~~~~~~~~i~~~~~~~~g~~~~~~ 168 (331)
T 3u4y_A 93 PDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIP---IPYDAVGIAISPNGN-GLILIDRSSANTVRRFKIDADGVLFDTG 168 (331)
T ss_dssp TTSSEEEECCCSSSSCEEEEEETTTTEEEEEEE---CCTTEEEEEECTTSS-CEEEEEETTTTEEEEEEECTTCCEEEEE
T ss_pred CCCCEEEEecCCCCcccEEEEECCCCCeEEEEE---CCCCccceEECCCCC-EEEEEecCCCceEEEEEECCCCcEeecC
Confidence 9999988555553 89999986543322221 122358899999873 35556666688 999998653321
Q ss_pred EEEcCCCCCeeEEEECCCCCEEEE-EeCCCeEEEEeCCCCce---EEEecCCCeEEEEEEcCCCeEEEEE--cCCcEEEE
Q 048118 163 ATLAGHTGYVNTVAVSPDGSLCAS-GGKDGVILLWDLAEGKR---LYSLDAGAVIHALCFSPNRYWLCAA--TEQSIKIW 236 (303)
Q Consensus 163 ~~~~~~~~~i~~~~~~~~~~~l~~-~~~d~~v~iwd~~~~~~---~~~~~~~~~v~~~~~s~~~~~l~~~--~~~~i~iw 236 (303)
............++|+|+|+++++ +..++.|.+||+.+++. +..+.....+..++|+|++.++.++ .++.|.+|
T Consensus 169 ~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~ 248 (331)
T 3u4y_A 169 QEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNF 248 (331)
T ss_dssp EEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEE
T ss_pred CccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEE
Confidence 112223456789999999996654 44689999999998887 7777767777889999999865544 36789999
Q ss_pred eCCCCce--eeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEee-cCCeEEEEeccc
Q 048118 237 DLESKSI--VEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGY-TDGVIRVWGIGR 302 (303)
Q Consensus 237 d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs-~Dg~v~~w~~~~ 302 (303)
|++++++ +..+........ ........++|+|++++|++++ .++.|.+||+..
T Consensus 249 d~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~ 304 (331)
T 3u4y_A 249 NQLSGTLSFVKSFGHGLLIDP-------------RPLFGANQMALNKTETKLFISANISRELKVFTISG 304 (331)
T ss_dssp ETTTTEEEEEEEEECCCCCCC-------------GGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTS
T ss_pred ECCCCceeeecccccccccCC-------------CCcccccceEECCCCCEEEEecCCCCcEEEEEecC
Confidence 9998876 222211100000 0000114578999999876554 567999999853
No 131
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.88 E-value=5.6e-20 Score=154.46 Aligned_cols=244 Identities=10% Similarity=0.129 Sum_probs=157.4
Q ss_pred ccccceeeeecCCCCCcEEEEecCC-CcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEee
Q 048118 13 AHTDMVTAIATPIDNSDMIVTASRD-KSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSI 91 (303)
Q Consensus 13 ~h~~~v~~v~~~~~~~~~~~t~s~d-~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~ 91 (303)
.|...+..++|+|++ +++++++.+ +.|++|++........ .... +.. .+.+..++|+|
T Consensus 35 ~~~~~~~~~~~spdg-~~l~~~~~~~~~v~~~~~~~~~~~~~-~~~~------------------~~~-~~~~~~~~~s~ 93 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDK-RYLYVGVRPEFRVLAYRIAPDDGALT-FAAE------------------SAL-PGSLTHISTDH 93 (343)
T ss_dssp ECSSCCCCEEECTTS-SEEEEEETTTTEEEEEEECTTTCCEE-EEEE------------------EEC-SSCCSEEEECT
T ss_pred ecCCCCceEEECCCC-CEEEEeecCCCeEEEEEecCCCCcee-eccc------------------ccc-CCCCcEEEEcC
Confidence 456678899999976 456666665 9999999862211100 0000 111 12567899999
Q ss_pred CCCEEEEEeC-CCcEEEEecCCce-eeeeecCCCCccceEEEEEcCCCCCCEEEEEe-CCCcEEEEECCC-ceeEE----
Q 048118 92 DNRQIVSASR-DRTIKLWNTLGEC-KYTIQEGDAHTEWVSCVRFSPNTLQPTIVSAS-WDRTVKVWNLSN-CKLRA---- 163 (303)
Q Consensus 92 ~~~~l~t~~~-d~~i~vw~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~dg~i~iwd~~~-~~~~~---- 163 (303)
+++++++++. ++.|.+|++.... ........ ....+.+++|+|++ ..+++++ .++.|++||+.+ ++...
T Consensus 94 dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg--~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~ 170 (343)
T 1ri6_A 94 QGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVE-GLDGCHSANISPDN--RTLWVPALKQDRICLFTVSDDGHLVAQDPA 170 (343)
T ss_dssp TSSEEEEEETTTTEEEEEEEETTEEEEEEEEEC-CCTTBCCCEECTTS--SEEEEEEGGGTEEEEEEECTTSCEEEEEEE
T ss_pred CCCEEEEEecCCCeEEEEECCCCcccccccccc-CCCCceEEEECCCC--CEEEEecCCCCEEEEEEecCCCceeeeccc
Confidence 9998766664 8889999983111 11111111 22347789999986 3455555 899999999987 54432
Q ss_pred EEcC-CCCCeeEEEECCCCCEEEEEe-CCCeEEEEeCCC--Cce--EEEe---cC----CCeEEEEEEcCCCeEEE-EE-
Q 048118 164 TLAG-HTGYVNTVAVSPDGSLCASGG-KDGVILLWDLAE--GKR--LYSL---DA----GAVIHALCFSPNRYWLC-AA- 228 (303)
Q Consensus 164 ~~~~-~~~~i~~~~~~~~~~~l~~~~-~d~~v~iwd~~~--~~~--~~~~---~~----~~~v~~~~~s~~~~~l~-~~- 228 (303)
.+.. ....+..++|+|+++++++++ .++.+.+||+.. ++. ...+ .. ...+..++|+|++..++ +.
T Consensus 171 ~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~ 250 (343)
T 1ri6_A 171 EVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDR 250 (343)
T ss_dssp EEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEET
T ss_pred ccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEec
Confidence 2222 234678899999999775554 789999999953 322 2222 11 23567899999986554 33
Q ss_pred cCCcEEEEeCCC--Cc--eeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEee-cCCeEEEEecc
Q 048118 229 TEQSIKIWDLES--KS--IVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGY-TDGVIRVWGIG 301 (303)
Q Consensus 229 ~~~~i~iwd~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs-~Dg~v~~w~~~ 301 (303)
.++.|.+||++. +. .+..+. ... .+..++|+|++++|++++ .|+.+.+|+++
T Consensus 251 ~~~~i~v~d~~~~~~~~~~~~~~~--------------------~~~-~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 251 TASLITVFSVSEDGSVLSKEGFQP--------------------TET-QPRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp TTTEEEEEEECTTSCCEEEEEEEE--------------------CSS-SCCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred CCCEEEEEEEcCCCCceEEeeeec--------------------CCC-ccceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 578999999972 22 111111 001 135689999999888777 68999999664
No 132
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.88 E-value=5e-20 Score=164.57 Aligned_cols=247 Identities=11% Similarity=0.087 Sum_probs=171.5
Q ss_pred ecccccccccceeeeecCCCCCcEEEEecCCCcEEEEEc--ccCccccceeeeeecCCCcceEEEEeCCCCceecccCCE
Q 048118 7 LKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHL--TKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDV 84 (303)
Q Consensus 7 ~~~~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i 84 (303)
++.++..+.. +..+.++|++ +++++++.|++|++||+ .... ....+ . +...+
T Consensus 171 ~~~~i~~g~~-~~~v~~spdg-~~l~v~~~d~~V~v~D~~~~t~~-----~~~~i------------------~-~g~~p 224 (543)
T 1nir_A 171 IVKVIDTGYA-VHISRMSASG-RYLLVIGRDARIDMIDLWAKEPT-----KVAEI------------------K-IGIEA 224 (543)
T ss_dssp EEEEEECSTT-EEEEEECTTS-CEEEEEETTSEEEEEETTSSSCE-----EEEEE------------------E-CCSEE
T ss_pred EEEEEecCcc-cceEEECCCC-CEEEEECCCCeEEEEECcCCCCc-----EEEEE------------------e-cCCCc
Confidence 4455553322 8899999875 68999999999999998 3321 11111 1 23456
Q ss_pred EEEEEee----CCCEEEEEe-CCCcEEEEecCCceee-eeecC----C---CC-ccceEEEEEcCCCCCCEEEEEeCCCc
Q 048118 85 LSVAFSI----DNRQIVSAS-RDRTIKLWNTLGECKY-TIQEG----D---AH-TEWVSCVRFSPNTLQPTIVSASWDRT 150 (303)
Q Consensus 85 ~~i~~~~----~~~~l~t~~-~d~~i~vw~~~~~~~~-~~~~~----~---~~-~~~i~~~~~~~~~~~~~~~~~~~dg~ 150 (303)
..++|+| +|+++++++ .++.|.+||....... .+... + .| ...+..+.++|++. ..+++...++.
T Consensus 225 ~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~-~~~vs~~~~g~ 303 (543)
T 1nir_A 225 RSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHP-EFIVNVKETGK 303 (543)
T ss_dssp EEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSS-EEEEEETTTTE
T ss_pred ceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCC-EEEEEECCCCe
Confidence 8899999 999998887 4899999997543222 22110 0 02 22578899999763 46778888999
Q ss_pred EEEEECCCceeEE--EEcCCCCCeeEEEECCCCCEEEEEe-CCCeEEEEeCCCCceEEEecCC-----CeEEEEEEcCC-
Q 048118 151 VKVWNLSNCKLRA--TLAGHTGYVNTVAVSPDGSLCASGG-KDGVILLWDLAEGKRLYSLDAG-----AVIHALCFSPN- 221 (303)
Q Consensus 151 i~iwd~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~v~iwd~~~~~~~~~~~~~-----~~v~~~~~s~~- 221 (303)
|.+||..+.+... .+. +...+..+.|+|++++|++++ .+++|.+||+.+++.+..+... .....+ ++|+
T Consensus 304 i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~ 381 (543)
T 1nir_A 304 VLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKY 381 (543)
T ss_dssp EEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTT
T ss_pred EEEEEecCCCcceeEEec-cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCC
Confidence 9999998755332 333 456688899999999876655 5899999999999888776532 112222 4676
Q ss_pred CeEEEEE--cCCcEEEEeCCC-------CceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEee--
Q 048118 222 RYWLCAA--TEQSIKIWDLES-------KSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGY-- 290 (303)
Q Consensus 222 ~~~l~~~--~~~~i~iwd~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs-- 290 (303)
+.+++++ .++.|.+||+.+ .+.+..++. +......+.++|++++|.+++
T Consensus 382 g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~--------------------~g~~~~~v~~~pdg~~l~v~~~~ 441 (543)
T 1nir_A 382 GPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQG--------------------QGGGSLFIKTHPKSSHLYVDTTF 441 (543)
T ss_dssp EEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEEC--------------------SCSCCCCEECCTTCCEEEECCTT
T ss_pred ccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEc--------------------CCCCceEEEcCCCCCcEEEecCC
Confidence 6666655 478999999987 555554432 122234578999999999998
Q ss_pred -----cCCeEEEEeccc
Q 048118 291 -----TDGVIRVWGIGR 302 (303)
Q Consensus 291 -----~Dg~v~~w~~~~ 302 (303)
.+++|.+||+..
T Consensus 442 ~~~~~~~~~v~v~d~~~ 458 (543)
T 1nir_A 442 NPDARISQSVAVFDLKN 458 (543)
T ss_dssp CSSHHHHTCEEEEETTC
T ss_pred CCCcccCceEEEEECCC
Confidence 388999999864
No 133
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.88 E-value=5.1e-20 Score=154.71 Aligned_cols=236 Identities=17% Similarity=0.266 Sum_probs=154.3
Q ss_pred cEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEeeCCCEEEEEeCC-CcEEE
Q 048118 29 DMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSIDNRQIVSASRD-RTIKL 107 (303)
Q Consensus 29 ~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~~~~~l~t~~~d-~~i~v 107 (303)
.++++++.|+.|++|++...... . .. ....|...+..++|+|+++++++++.+ +.|.+
T Consensus 6 ~l~~~~~~~~~v~~~~~~~~~~~-~-~~-------------------~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~ 64 (343)
T 1ri6_A 6 TVYIASPESQQIHVWNLNHEGAL-T-LT-------------------QVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLA 64 (343)
T ss_dssp EEEEEEGGGTEEEEEEECTTSCE-E-EE-------------------EEEECSSCCCCEEECTTSSEEEEEETTTTEEEE
T ss_pred EEEEeCCCCCeEEEEEECCCCcE-E-Ee-------------------eeEecCCCCceEEECCCCCEEEEeecCCCeEEE
Confidence 45566688999999998532110 0 00 012355677889999999988888886 89999
Q ss_pred EecC--CceeeeeecCCCCccceEEEEEcCCCCCCEEEEE-eCCCcEEEEECC---CceeEEEEcCCCCCeeEEEECCCC
Q 048118 108 WNTL--GECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSA-SWDRTVKVWNLS---NCKLRATLAGHTGYVNTVAVSPDG 181 (303)
Q Consensus 108 w~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~dg~i~iwd~~---~~~~~~~~~~~~~~i~~~~~~~~~ 181 (303)
|++. +...........+ ..+..++|+|++ ..++++ ..++.|.+||+. ..+....+..+ ..+.+++|+|++
T Consensus 65 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~dg--~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg 140 (343)
T 1ri6_A 65 YRIAPDDGALTFAAESALP-GSLTHISTDHQG--QFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISPDN 140 (343)
T ss_dssp EEECTTTCCEEEEEEEECS-SCCSEEEECTTS--SEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECTTS
T ss_pred EEecCCCCceeeccccccC-CCCcEEEEcCCC--CEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEECCCC
Confidence 9985 2222212111112 256789999986 345444 458899999994 33444444443 458889999999
Q ss_pred CEEEEEe-CCCeEEEEeCCC-CceE------EEecCCCeEEEEEEcCCCeEE-EEE-cCCcEEEEeCCC--Cceeeeeee
Q 048118 182 SLCASGG-KDGVILLWDLAE-GKRL------YSLDAGAVIHALCFSPNRYWL-CAA-TEQSIKIWDLES--KSIVEDLKV 249 (303)
Q Consensus 182 ~~l~~~~-~d~~v~iwd~~~-~~~~------~~~~~~~~v~~~~~s~~~~~l-~~~-~~~~i~iwd~~~--~~~~~~~~~ 249 (303)
+++++++ .++.|++||+.+ ++.. ........+..++|+|++.++ +++ .++.|.+||++. ++.......
T Consensus 141 ~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~ 220 (343)
T 1ri6_A 141 RTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTL 220 (343)
T ss_dssp SEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEE
T ss_pred CEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeec
Confidence 9888777 899999999987 5432 122345578889999998755 444 578999999953 332111110
Q ss_pred ccccccccccCccceeeccccceeEEEEEEcCCCCEEE-EeecCCeEEEEecc
Q 048118 250 DLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLF-SGYTDGVIRVWGIG 301 (303)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~-~gs~Dg~v~~w~~~ 301 (303)
.... . -......+..++|+|++++|+ ++..|+.|++|++.
T Consensus 221 ~~~~------~------~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 221 DMMP------E------NFSDTRWAADIHITPDGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp ECSC------T------TCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred cccC------c------cccccCCccceEECCCCCEEEEEecCCCEEEEEEEc
Confidence 0000 0 001122456799999998777 55589999999985
No 134
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.88 E-value=6.7e-20 Score=153.60 Aligned_cols=225 Identities=15% Similarity=0.178 Sum_probs=156.2
Q ss_pred cEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccC-CEEEEEEeeCCCEE-EEEeCCCcEE
Q 048118 29 DMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTK-DVLSVAFSIDNRQI-VSASRDRTIK 106 (303)
Q Consensus 29 ~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~-~i~~i~~~~~~~~l-~t~~~d~~i~ 106 (303)
+++++++.+++|.+||....+.. ..+. .++.. .+..++|+|+++++ +++..++.|.
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~-----~~~~-----------------~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~ 59 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVD-----KVIT-----------------IADAGPTPMVPMVAPGGRIAYATVNKSESLV 59 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEE-----EEEE-----------------CTTCTTCCCCEEECTTSSEEEEEETTTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEE-----EEEE-----------------cCCCCCCccceEEcCCCCEEEEEeCCCCeEE
Confidence 57999999999999998653211 1110 01111 36678999999765 5566678999
Q ss_pred EEecCCceee-eeecCCC--CccceEEEEEcCCCCCCEEEEEe------------CCCcEEEEECCCceeEEEEcCCCCC
Q 048118 107 LWNTLGECKY-TIQEGDA--HTEWVSCVRFSPNTLQPTIVSAS------------WDRTVKVWNLSNCKLRATLAGHTGY 171 (303)
Q Consensus 107 vw~~~~~~~~-~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~------------~dg~i~iwd~~~~~~~~~~~~~~~~ 171 (303)
+||....... .+..... +...+.+++|+|++ ..++++. .++.|.+||+.+++....+.. ...
T Consensus 60 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg--~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~ 136 (337)
T 1pby_B 60 KIDLVTGETLGRIDLSTPEERVKSLFGAALSPDG--KTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQ 136 (337)
T ss_dssp EEETTTCCEEEEEECCBTTEEEECTTCEEECTTS--SEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSS
T ss_pred EEECCCCCeEeeEEcCCcccccccccceEECCCC--CEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCC
Confidence 9998543322 2221110 11245678999986 3455554 579999999998887766654 346
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEecCC-----------------------------------------
Q 048118 172 VNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAG----------------------------------------- 210 (303)
Q Consensus 172 i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~----------------------------------------- 210 (303)
+..++|+|++++|+++ ++.|.+||+.+++.+..+...
T Consensus 137 ~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (337)
T 1pby_B 137 ITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADP 214 (337)
T ss_dssp CCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSG
T ss_pred cceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccc
Confidence 7889999999988777 688999999887665433211
Q ss_pred --------------------------CeEEEEEEcCCCeEEEEEcCCcEEEEeCCCCceeeeeeeccccccccccCccce
Q 048118 211 --------------------------AVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTAT 264 (303)
Q Consensus 211 --------------------------~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (303)
..+..++|+|++.+++++ ++.|++||+++++.+..+...
T Consensus 215 ~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~v~~~d~~~~~~~~~~~~~-------------- 279 (337)
T 1pby_B 215 TAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA-YNVLESFDLEKNASIKRVPLP-------------- 279 (337)
T ss_dssp GGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE-ESEEEEEETTTTEEEEEEECS--------------
T ss_pred cccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe-CCeEEEEECCCCcCcceecCC--------------
Confidence 123457889998777666 789999999887766544321
Q ss_pred eeccccceeEEEEEEcCCCCEEEEeecCCeEEEEeccc
Q 048118 265 TTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIGR 302 (303)
Q Consensus 265 ~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~~ 302 (303)
..+.+++|+|++++|++++.|+.|++||+..
T Consensus 280 -------~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~ 310 (337)
T 1pby_B 280 -------HSYYSVNVSTDGSTVWLGGALGDLAAYDAET 310 (337)
T ss_dssp -------SCCCEEEECTTSCEEEEESBSSEEEEEETTT
T ss_pred -------CceeeEEECCCCCEEEEEcCCCcEEEEECcC
Confidence 1134688999999999999999999999853
No 135
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.88 E-value=1.4e-20 Score=154.57 Aligned_cols=235 Identities=13% Similarity=0.107 Sum_probs=159.7
Q ss_pred cccccccceeeeecCCCCCcEEEEecCCCcEEEEEccc-CccccceeeeeecCCCcceEEEEeCCCCceecc-cCCEEEE
Q 048118 10 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTK-EEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGH-TKDVLSV 87 (303)
Q Consensus 10 ~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h-~~~i~~i 87 (303)
.+..|...|.+++|+|++ ++|++++ ++.|.+|++.. .... .. ..+| ...+.++
T Consensus 36 ~~~~~~~~v~~~~~spdg-~~l~~~~-~~~i~~~d~~~~~~~~-----~~------------------~~~~~~~~~~~~ 90 (297)
T 2ojh_A 36 VVWQTPELFEAPNWSPDG-KYLLLNS-EGLLYRLSLAGDPSPE-----KV------------------DTGFATICNNDH 90 (297)
T ss_dssp EEEEESSCCEEEEECTTS-SEEEEEE-TTEEEEEESSSCCSCE-----EC------------------CCTTCCCBCSCC
T ss_pred eeccCCcceEeeEECCCC-CEEEEEc-CCeEEEEeCCCCCCce-----Ee------------------ccccccccccce
Confidence 355688889999999976 5777776 78999999865 3221 00 1122 3567789
Q ss_pred EEeeCCCEEEEEe--CCCcEEEEec--CCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEEC--CCcee
Q 048118 88 AFSIDNRQIVSAS--RDRTIKLWNT--LGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNL--SNCKL 161 (303)
Q Consensus 88 ~~~~~~~~l~t~~--~d~~i~vw~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~--~~~~~ 161 (303)
+|+|+++++++++ .++..+||.. .+.....+ . ....+.+++|+|++. ..++++..++.+++|++ .+++
T Consensus 91 ~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~---~-~~~~~~~~~~spdg~-~l~~~~~~~~~~~l~~~~~~~~~- 164 (297)
T 2ojh_A 91 GISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLM---T-KNLPSYWHGWSPDGK-SFTYCGIRDQVFDIYSMDIDSGV- 164 (297)
T ss_dssp EECTTSSEEEEEECTTTSSCEEEEEETTCCCCEEC---C-SSSSEEEEEECTTSS-EEEEEEEETTEEEEEEEETTTCC-
T ss_pred EECCCCCEEEEEEeCCCCcceEEEEECCCCceEEe---e-cCCCccceEECCCCC-EEEEEECCCCceEEEEEECCCCc-
Confidence 9999999999998 4456666654 33222111 1 122378899999863 23447788999999985 3333
Q ss_pred EEEEcCCCCCeeEEEECCCCCEEEEEe-CCCeEEEEeCC-CCceEEEec-CCCeEEEEEEcCCCeEEEEE-cC-------
Q 048118 162 RATLAGHTGYVNTVAVSPDGSLCASGG-KDGVILLWDLA-EGKRLYSLD-AGAVIHALCFSPNRYWLCAA-TE------- 230 (303)
Q Consensus 162 ~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~v~iwd~~-~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~-~~------- 230 (303)
...+..+...+.+++|+|+++.|+.++ .++.+++|++. .+..+..+. ....+..++|+|++.+++.+ .+
T Consensus 165 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 244 (297)
T 2ojh_A 165 ETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHP 244 (297)
T ss_dssp EEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCC
T ss_pred ceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCccc
Confidence 355666778899999999999887766 58999999886 444444543 34578889999998766544 33
Q ss_pred ----CcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCC
Q 048118 231 ----QSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDG 293 (303)
Q Consensus 231 ----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg 293 (303)
+.|++||+++++....... ..+...+..++|+|++++|++++.|.
T Consensus 245 ~~~~~~l~~~d~~~~~~~~~~~~------------------~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 245 RDLDVRVQLMDMDGGNVETLFDL------------------FGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp SSEEEEEEEEETTSCSCEEEEEE------------------EESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred ccCceEEEEEecCCCCceeeecc------------------CCCCcccccceECCCCCEEEEEEecc
Confidence 4699999987754322211 11112234578999999998887764
No 136
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.88 E-value=1.4e-19 Score=152.79 Aligned_cols=238 Identities=10% Similarity=0.090 Sum_probs=166.9
Q ss_pred cceeeeecCCCCCcEEEEecC------CCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEE
Q 048118 16 DMVTAIATPIDNSDMIVTASR------DKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAF 89 (303)
Q Consensus 16 ~~v~~v~~~~~~~~~~~t~s~------d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~ 89 (303)
..+..++++|++..++++... ++.|.+||....+.. ... .....+..++|
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~-----~~~-------------------~~~~~~~~~~~ 96 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVT-----QAI-------------------HNDLKPFGATI 96 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEE-----EEE-------------------EESSCCCSEEE
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEE-----EEE-------------------ecCCCcceEEE
Confidence 456788999876544444433 568999998654321 110 01223567899
Q ss_pred eeCCCEE-EEEeCCCcEEEEecCCcee-eeeecCCCC------ccceEEEEEcCCCCCCEEEEE--eCCCcEEEEECCCc
Q 048118 90 SIDNRQI-VSASRDRTIKLWNTLGECK-YTIQEGDAH------TEWVSCVRFSPNTLQPTIVSA--SWDRTVKVWNLSNC 159 (303)
Q Consensus 90 ~~~~~~l-~t~~~d~~i~vw~~~~~~~-~~~~~~~~~------~~~i~~~~~~~~~~~~~~~~~--~~dg~i~iwd~~~~ 159 (303)
+|+++++ ++...++.|.+||...... ..+...... ...+.++.|+|++. .++.+ +.++.|.+||..++
T Consensus 97 s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~--~l~~~~~~~~~~i~~~d~~~~ 174 (353)
T 3vgz_A 97 NNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATN--TVYISGIGKESVIWVVDGGNI 174 (353)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTT--EEEEEEESSSCEEEEEETTTT
T ss_pred CCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCC--EEEEEecCCCceEEEEcCCCC
Confidence 9999855 4555679999999864432 222221111 11267899999863 34443 35789999999999
Q ss_pred eeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEecC-----CCeEEEEEEcCCCeEEEEE--cCCc
Q 048118 160 KLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDA-----GAVIHALCFSPNRYWLCAA--TEQS 232 (303)
Q Consensus 160 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~-----~~~v~~~~~s~~~~~l~~~--~~~~ 232 (303)
+....+..+...+..++|+|+++.+++++.++.+.+||+.+++.+..+.. ...+..++|+|++..+.++ .++.
T Consensus 175 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 254 (353)
T 3vgz_A 175 KLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAE 254 (353)
T ss_dssp EEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSE
T ss_pred ceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCE
Confidence 88888775556688899999999999999999999999999988776643 3457789999998654433 3589
Q ss_pred EEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEee-cCCeEEEEecc
Q 048118 233 IKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGY-TDGVIRVWGIG 301 (303)
Q Consensus 233 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs-~Dg~v~~w~~~ 301 (303)
|.+||.++++.+..+... . ...++|+|+++++++++ .++.|.+||+.
T Consensus 255 v~~~d~~~~~~~~~~~~~-------------------~---~~~~~~s~dg~~l~v~~~~~~~v~~~d~~ 302 (353)
T 3vgz_A 255 VLVVDTRNGNILAKVAAP-------------------E---SLAVLFNPARNEAYVTHRQAGKVSVIDAK 302 (353)
T ss_dssp EEEEETTTCCEEEEEECS-------------------S---CCCEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EEEEECCCCcEEEEEEcC-------------------C---CceEEECCCCCEEEEEECCCCeEEEEECC
Confidence 999999998877655421 0 02478999999665554 79999999985
No 137
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.87 E-value=7.8e-20 Score=150.02 Aligned_cols=219 Identities=14% Similarity=0.113 Sum_probs=148.9
Q ss_pred EecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEeeCCCEEEEEeCCCcEEEEecCC
Q 048118 33 TASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLG 112 (303)
Q Consensus 33 t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~ 112 (303)
+++.|++|++||+...... .+..|...|.+++|+|+++++++++ ++.|.+||..+
T Consensus 17 ~~~~~~~i~~~d~~~~~~~------------------------~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~ 71 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMR------------------------VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAG 71 (297)
T ss_dssp -CCCCEEEEEEETTTTEEE------------------------EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSS
T ss_pred CCCcceeEEEEeCCCCcee------------------------eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCC
Confidence 4567899999998643211 1234778899999999999999886 78999999865
Q ss_pred -ceeeeeecCCCCccceEEEEEcCCCCCCEEEEEe--CCCcEEEE--ECCCceeEEEEcCCCCCeeEEEECCCCCEEE-E
Q 048118 113 -ECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSAS--WDRTVKVW--NLSNCKLRATLAGHTGYVNTVAVSPDGSLCA-S 186 (303)
Q Consensus 113 -~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--~dg~i~iw--d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~ 186 (303)
........ ..+...+.+++|+|++ ..+++++ .++..++| +..+++ ...+..+ ..+..++|+|+++.|+ +
T Consensus 72 ~~~~~~~~~-~~~~~~~~~~~~spdg--~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~ 146 (297)
T 2ojh_A 72 DPSPEKVDT-GFATICNNDHGISPDG--ALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYC 146 (297)
T ss_dssp CCSCEECCC-TTCCCBCSCCEECTTS--SEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEE
T ss_pred CCCceEecc-ccccccccceEECCCC--CEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEE
Confidence 43222221 1223567889999986 4677777 33445554 555544 3334433 3588899999999877 7
Q ss_pred EeCCCeEEEEeCC--CCceEEEecCCCeEEEEEEcCCCeEEEE-E-cCCcEEEEeCC-CCceeeeeeeccccccccccCc
Q 048118 187 GGKDGVILLWDLA--EGKRLYSLDAGAVIHALCFSPNRYWLCA-A-TEQSIKIWDLE-SKSIVEDLKVDLKTEAEKSEAT 261 (303)
Q Consensus 187 ~~~d~~v~iwd~~--~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~-~~~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~ 261 (303)
++.++.+++|++. +++..........+.+++|+|++..++. + .++.+.+|+++ .+..+..
T Consensus 147 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~--------------- 211 (297)
T 2ojh_A 147 GIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVER--------------- 211 (297)
T ss_dssp EEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEE---------------
T ss_pred ECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEE---------------
Confidence 7789999999853 4443322344567899999999876554 3 37888888875 2222221
Q ss_pred cceeeccccceeEEEEEEcCCCCEEEEeecC-----------CeEEEEecc
Q 048118 262 TATTTIKKKNIYCTSLNWSVDGSTLFSGYTD-----------GVIRVWGIG 301 (303)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~D-----------g~v~~w~~~ 301 (303)
+..+...+..++|+|++++|++++.+ +.|.+||+.
T Consensus 212 -----~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~ 257 (297)
T 2ojh_A 212 -----ITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMD 257 (297)
T ss_dssp -----CCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETT
T ss_pred -----EecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecC
Confidence 12223456778999999999988876 569999874
No 138
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.87 E-value=2.3e-20 Score=173.07 Aligned_cols=256 Identities=13% Similarity=0.097 Sum_probs=168.8
Q ss_pred cceeeeecCCCCCcEEEEecC-CC-----cEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCc-e--e---cccCC
Q 048118 16 DMVTAIATPIDNSDMIVTASR-DK-----SIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQ-F--V---GHTKD 83 (303)
Q Consensus 16 ~~v~~v~~~~~~~~~~~t~s~-d~-----~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~--~---~h~~~ 83 (303)
..+..++|+|++ ++|++++. |+ +|++|++...+.. ..+..+...-..-.++.+.. . . .....
T Consensus 37 ~~~~~~~~SpdG-~~la~~~~~d~~~~~~~i~~~d~~~g~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (741)
T 2ecf_A 37 PTLMKPKVAPDG-SRVTFLRGKDSDRNQLDLWSYDIGSGQTR-----LLVDSKVVLPGTETLSDEEKARRERQRIAAMTG 110 (741)
T ss_dssp CCCEEEEECTTS-SEEEEEECCSSCTTEEEEEEEETTTCCEE-----EEECGGGTC--------------------CCEE
T ss_pred CCCCCceEecCC-CEEEEEeccCCCCcccEEEEEECCCCcee-----EccchhhcccccccccchhhhhhhhhhhccccC
Confidence 468999999976 57888888 88 8999998754321 11111100000000000000 0 0 00123
Q ss_pred EEEEEEeeCCCEEEEEeCCCcEEEEecCCc---eeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCce
Q 048118 84 VLSVAFSIDNRQIVSASRDRTIKLWNTLGE---CKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCK 160 (303)
Q Consensus 84 i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~ 160 (303)
|..++|+|+|++|++++. +.|.+||+.+. ....+ ..+...+.+++|+|++ ..++.++ ++.|++||+.+++
T Consensus 111 v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l---~~~~~~~~~~~~SPDG--~~la~~~-~~~i~~~d~~~g~ 183 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQL---THGEGFATDAKLSPKG--GFVSFIR-GRNLWVIDLASGR 183 (741)
T ss_dssp SCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBC---CCSSSCEEEEEECTTS--SEEEEEE-TTEEEEEETTTTE
T ss_pred cceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEc---ccCCcccccccCCCCC--CEEEEEe-CCcEEEEecCCCC
Confidence 678999999999999887 89999998654 22222 2345668999999997 3566655 5699999998877
Q ss_pred eEEEEcCCCCC----------------eeEEEECCCCCEEEEEeCCC---------------------------------
Q 048118 161 LRATLAGHTGY----------------VNTVAVSPDGSLCASGGKDG--------------------------------- 191 (303)
Q Consensus 161 ~~~~~~~~~~~----------------i~~~~~~~~~~~l~~~~~d~--------------------------------- 191 (303)
.......+... +..++|+|||++|++++.|+
T Consensus 184 ~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~ 263 (741)
T 2ecf_A 184 QMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQV 263 (741)
T ss_dssp EEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEE
T ss_pred EEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCee
Confidence 65544333332 47799999999999988765
Q ss_pred eEEEEeCCC-CceEEEe---cCCCeEEEEEEcCCCeEEEEEc------CCcEEEEeCCCCceeeeeeeccccccccccCc
Q 048118 192 VILLWDLAE-GKRLYSL---DAGAVIHALCFSPNRYWLCAAT------EQSIKIWDLESKSIVEDLKVDLKTEAEKSEAT 261 (303)
Q Consensus 192 ~v~iwd~~~-~~~~~~~---~~~~~v~~~~~s~~~~~l~~~~------~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 261 (303)
.|.+||+.+ ++..... .....+..++| |++..|+... +..|++||+++++....+..... .
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~-------~- 334 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSP-------T- 334 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECS-------S-
T ss_pred EEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCC-------C-
Confidence 889999988 7654332 13457889999 9997766442 45799999998875543321100 0
Q ss_pred cceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEecc
Q 048118 262 TATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~ 301 (303)
....+..++|+|||+++++++.||.+++|.+.
T Consensus 335 --------~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~ 366 (741)
T 2ecf_A 335 --------WVPLHNSLRFLDDGSILWSSERTGFQHLYRID 366 (741)
T ss_dssp --------CCCCCSCCEECTTSCEEEEECTTSSCEEEEEC
T ss_pred --------cCCcCCceEECCCCeEEEEecCCCccEEEEEc
Confidence 00012357899999999999999988888653
No 139
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.87 E-value=1.5e-19 Score=152.25 Aligned_cols=232 Identities=13% Similarity=0.100 Sum_probs=157.0
Q ss_pred eeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEeeCCCEE-EE
Q 048118 20 AIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSIDNRQI-VS 98 (303)
Q Consensus 20 ~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~~~~~l-~t 98 (303)
.++++++ ..++++++.+++|.+||...... ...+.. +....+..++|+|+++++ ++
T Consensus 4 g~~~~~~-~~~~v~~~~~~~v~~~d~~~~~~-----~~~~~~-----------------~~~~~~~~~~~s~dg~~~~v~ 60 (349)
T 1jmx_B 4 GPALKAG-HEYMIVTNYPNNLHVVDVASDTV-----YKSCVM-----------------PDKFGPGTAMMAPDNRTAYVL 60 (349)
T ss_dssp CCCCCTT-CEEEEEEETTTEEEEEETTTTEE-----EEEEEC-----------------SSCCSSCEEEECTTSSEEEEE
T ss_pred cccccCC-CEEEEEeCCCCeEEEEECCCCcE-----EEEEec-----------------CCCCCCceeEECCCCCEEEEE
Confidence 4556654 57899999999999999865321 111110 011135678999999865 45
Q ss_pred EeCCCcEEEEecCCceeeeeecCCCC----ccceEEEEEcCCCCCCEEEEEeCC------------CcEEEEECCCce--
Q 048118 99 ASRDRTIKLWNTLGECKYTIQEGDAH----TEWVSCVRFSPNTLQPTIVSASWD------------RTVKVWNLSNCK-- 160 (303)
Q Consensus 99 ~~~d~~i~vw~~~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~d------------g~i~iwd~~~~~-- 160 (303)
+..++.|.+||..+............ ...+.+++|+|++ ..+++++.+ +.|.+||+.+++
T Consensus 61 ~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg--~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~ 138 (349)
T 1jmx_B 61 NNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDG--KEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEA 138 (349)
T ss_dssp ETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTS--SEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGB
T ss_pred eCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCC--CEEEEEcccccccccccccCCCeEEEEECCCcccc
Confidence 56789999999865433221111110 2235678999986 356666644 899999998743
Q ss_pred -eEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEecCCC----------------------------
Q 048118 161 -LRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGA---------------------------- 211 (303)
Q Consensus 161 -~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~---------------------------- 211 (303)
....+.. ...+.+++|+|+++ +++++. .|.+||+.+++.+..+....
T Consensus 139 ~~~~~~~~-~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (349)
T 1jmx_B 139 KPVRTFPM-PRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLY 214 (349)
T ss_dssp CCSEEEEC-CSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEE
T ss_pred ceeeeccC-CCcccceeECCCCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeee
Confidence 2333433 34688899999999 555543 49999998887765553221
Q ss_pred -----------------------------------------eEEEEEEcC-CCeEEEEEcCCcEEEEeCCCCceeeeeee
Q 048118 212 -----------------------------------------VIHALCFSP-NRYWLCAATEQSIKIWDLESKSIVEDLKV 249 (303)
Q Consensus 212 -----------------------------------------~v~~~~~s~-~~~~l~~~~~~~i~iwd~~~~~~~~~~~~ 249 (303)
.+..++|+| ++..++++ ++.|++||+++++.+..+..
T Consensus 215 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~-~~~v~~~d~~~~~~~~~~~~ 293 (349)
T 1jmx_B 215 TIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQRKLIKAANL 293 (349)
T ss_dssp EEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-ESEEEEEETTTTEEEEEEEC
T ss_pred eeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE-cCeEEEEECccCeEEEEEcC
Confidence 234567789 88777766 88999999998877655432
Q ss_pred ccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEeccc
Q 048118 250 DLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIGR 302 (303)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~~ 302 (303)
. ..+..++|+|++++|++++.++.|++||+..
T Consensus 294 ~---------------------~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~ 325 (349)
T 1jmx_B 294 D---------------------HTYYCVAFDKKGDKLYLGGTFNDLAVFNPDT 325 (349)
T ss_dssp S---------------------SCCCEEEECSSSSCEEEESBSSEEEEEETTT
T ss_pred C---------------------CCccceEECCCCCEEEEecCCCeEEEEeccc
Confidence 1 0124588999999988899999999999853
No 140
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.87 E-value=1.7e-20 Score=173.50 Aligned_cols=240 Identities=11% Similarity=0.054 Sum_probs=162.4
Q ss_pred ceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccC---CEEEEEEeeCC
Q 048118 17 MVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTK---DVLSVAFSIDN 93 (303)
Q Consensus 17 ~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~---~i~~i~~~~~~ 93 (303)
.+..++|+|++. ++++ +.|++|++|+....... ..+ ..|.. .|.+++|+|+|
T Consensus 18 ~~~~~~~spdg~-~~~~-~~dg~i~~~d~~~g~~~-----~~~------------------~~~~~~~~~v~~~~~SpDg 72 (723)
T 1xfd_A 18 HDPEAKWISDTE-FIYR-EQKGTVRLWNVETNTST-----VLI------------------EGKKIESLRAIRYEISPDR 72 (723)
T ss_dssp CCCCCCBSSSSC-BCCC-CSSSCEEEBCGGGCCCE-----EEE------------------CTTTTTTTTCSEEEECTTS
T ss_pred cccccEEcCCCc-EEEE-eCCCCEEEEECCCCcEE-----EEe------------------ccccccccccceEEECCCC
Confidence 367889999764 6655 78999999998754321 111 12222 47899999999
Q ss_pred CEEEEEeCC---------CcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEE
Q 048118 94 RQIVSASRD---------RTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRAT 164 (303)
Q Consensus 94 ~~l~t~~~d---------~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~ 164 (303)
++|++++.+ +.+.+||+.+.....+.....+...+..++|+|++. .++.++. +.|++||+.+++....
T Consensus 73 ~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~--~la~~~~-~~i~~~~~~~g~~~~~ 149 (723)
T 1xfd_A 73 EYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQ--QLIFIFE-NNIYYCAHVGKQAIRV 149 (723)
T ss_dssp SEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTT--CEEEEET-TEEEEESSSSSCCEEE
T ss_pred CEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCC--EEEEEEC-CeEEEEECCCCceEEE
Confidence 999999875 678899986543322332233444577899999973 4666554 7999999988876655
Q ss_pred EcCCCCCe------------------eEEEECCCCCEEEEEeCCC----------------------------------e
Q 048118 165 LAGHTGYV------------------NTVAVSPDGSLCASGGKDG----------------------------------V 192 (303)
Q Consensus 165 ~~~~~~~i------------------~~~~~~~~~~~l~~~~~d~----------------------------------~ 192 (303)
...+...+ .+++|+|||+.|++++.|+ .
T Consensus 150 ~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 229 (723)
T 1xfd_A 150 VSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSIS 229 (723)
T ss_dssp ECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEE
T ss_pred ecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeE
Confidence 55443333 7899999999999887553 7
Q ss_pred EEEEeCCCCceEEEecC-------CCeEEEEEEcCCCeEEEEEc-----CCcEEEEeCCCCceeeeeeeccccccccccC
Q 048118 193 ILLWDLAEGKRLYSLDA-------GAVIHALCFSPNRYWLCAAT-----EQSIKIWDLESKSIVEDLKVDLKTEAEKSEA 260 (303)
Q Consensus 193 v~iwd~~~~~~~~~~~~-------~~~v~~~~~s~~~~~l~~~~-----~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 260 (303)
|++||+.+++....+.. ...+..++|+||+.+++... +..|++||+.+++....+..... .
T Consensus 230 l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~-------~ 302 (723)
T 1xfd_A 230 LHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESE-------A 302 (723)
T ss_dssp EEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECS-------S
T ss_pred EEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccC-------C
Confidence 99999988875444442 35788999999998775542 24699999988875443221000 0
Q ss_pred ccceeeccccceeEEEEEEcCCCCEEEE--eecCC------eEEEEe
Q 048118 261 TTATTTIKKKNIYCTSLNWSVDGSTLFS--GYTDG------VIRVWG 299 (303)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~sp~~~~l~~--gs~Dg------~v~~w~ 299 (303)
. . ......++|+|||+.|+. +..|| .|.+||
T Consensus 303 ~-----~---~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 341 (723)
T 1xfd_A 303 W-----L---HRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSS 341 (723)
T ss_dssp C-----C---CCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEEC
T ss_pred E-----E---eccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEe
Confidence 0 0 000024789999997764 55677 455566
No 141
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.86 E-value=2.8e-19 Score=150.99 Aligned_cols=247 Identities=13% Similarity=0.140 Sum_probs=158.4
Q ss_pred cccceeeeecCCCCCcEEEEecC--CCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEee
Q 048118 14 HTDMVTAIATPIDNSDMIVTASR--DKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSI 91 (303)
Q Consensus 14 h~~~v~~v~~~~~~~~~~~t~s~--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~ 91 (303)
+...+..++|+|++. +++++.. ++.|.+|++...... ... .+..+...+..++|+|
T Consensus 38 ~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~---~~~------------------~~~~~~~~p~~~a~sp 95 (347)
T 3hfq_A 38 ATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAH---KLN------------------TVVAPGTPPAYVAVDE 95 (347)
T ss_dssp ECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEE---EEE------------------EEEEESCCCSEEEEET
T ss_pred ccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEE---Eee------------------eeecCCCCCEEEEECC
Confidence 445677889998764 5555432 689999998533211 000 1123455677899999
Q ss_pred CCCEEEEEe-CCCcEEEEecCCc-eeeeee--cCCC-------CccceEEEEEcCCCCCCEEEEEeCCCcEEEEECC-Cc
Q 048118 92 DNRQIVSAS-RDRTIKLWNTLGE-CKYTIQ--EGDA-------HTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLS-NC 159 (303)
Q Consensus 92 ~~~~l~t~~-~d~~i~vw~~~~~-~~~~~~--~~~~-------~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~-~~ 159 (303)
+|++|++++ .++.|.+|++... ....+. .... ....+.+++|+|++. .+++...++.|++|++. ++
T Consensus 96 dg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~--l~v~~~~~~~v~~~~~~~~g 173 (347)
T 3hfq_A 96 ARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR--LAVIDLGSDKVYVYNVSDAG 173 (347)
T ss_dssp TTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC--EEEEETTTTEEEEEEECTTS
T ss_pred CCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc--EEEEeCCCCEEEEEEECCCC
Confidence 999888887 7789999997521 111111 1110 123478899999873 66667778899999998 45
Q ss_pred eeE--EEEcCC-CCCeeEEEECCCCCEEEE-EeCCCeEEEEeCCC--Cce--EEEec---C----CCeEEEEEEcCCCeE
Q 048118 160 KLR--ATLAGH-TGYVNTVAVSPDGSLCAS-GGKDGVILLWDLAE--GKR--LYSLD---A----GAVIHALCFSPNRYW 224 (303)
Q Consensus 160 ~~~--~~~~~~-~~~i~~~~~~~~~~~l~~-~~~d~~v~iwd~~~--~~~--~~~~~---~----~~~v~~~~~s~~~~~ 224 (303)
+.. ..+..+ ......++|+|+|+++++ +..++.+.+|++.. ++. +..+. . ...+..++|+|++.+
T Consensus 174 ~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~ 253 (347)
T 3hfq_A 174 QLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHF 253 (347)
T ss_dssp CEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCE
T ss_pred cEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCE
Confidence 432 222222 235778999999996655 45689999999874 432 22221 1 146889999999976
Q ss_pred EEE--EcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecC-CeEEEEecc
Q 048118 225 LCA--ATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTD-GVIRVWGIG 301 (303)
Q Consensus 225 l~~--~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~D-g~v~~w~~~ 301 (303)
|++ ..++.|.+|++........+. .+..+...+..++|+|+|++|++++.+ +.|.+|+++
T Consensus 254 l~v~~~~~~~v~v~~~~~~g~~~~~~-----------------~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 254 LYVSNRGYNTLAVFAVTADGHLTLIQ-----------------QISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp EEEEEETTTEEEEEEECGGGCEEEEE-----------------EEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EEEEeCCCCEEEEEEECCCCcEEEeE-----------------EEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 533 347899999986332111111 011111223568999999988887764 999999653
No 142
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.86 E-value=2.9e-20 Score=161.83 Aligned_cols=202 Identities=12% Similarity=0.110 Sum_probs=143.1
Q ss_pred CEEEEEEeeCCCEEEEEeCCCcEEEEecCCcee--------eeee-----cCCCCccceEEEEEcCCCCCCEEE----EE
Q 048118 83 DVLSVAFSIDNRQIVSASRDRTIKLWNTLGECK--------YTIQ-----EGDAHTEWVSCVRFSPNTLQPTIV----SA 145 (303)
Q Consensus 83 ~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~--------~~~~-----~~~~~~~~i~~~~~~~~~~~~~~~----~~ 145 (303)
.++.+++++++.++++++.|+ +++|+...... .... ..-.+...|.+++|+|++ ..++ ++
T Consensus 38 ~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg--~~lav~~~sg 114 (434)
T 2oit_A 38 RSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDN--LTLSACMMSS 114 (434)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTS--CEEEEEEEET
T ss_pred CccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCC--CEEEEEEecc
Confidence 466789999999999999888 88886421000 0000 001234569999999986 4566 78
Q ss_pred eCCCcEEEEECCCc--------e---eEEEEcCCCCCeeEEEECCC-CCEEEEEeCCCeEEEEeCCCCceEEEe-cCCCe
Q 048118 146 SWDRTVKVWNLSNC--------K---LRATLAGHTGYVNTVAVSPD-GSLCASGGKDGVILLWDLAEGKRLYSL-DAGAV 212 (303)
Q Consensus 146 ~~dg~i~iwd~~~~--------~---~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~d~~v~iwd~~~~~~~~~~-~~~~~ 212 (303)
+.|+.|++||+.+. + ....+.+|...|.+++|+|+ +.+|++++.||+|++||+++++.+... .....
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~ 194 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVA 194 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGC
T ss_pred CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCc
Confidence 88999999998654 1 13455678999999999997 789999999999999999988665443 34568
Q ss_pred EEEEEEcCCCeEEE-EEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEE-ee
Q 048118 213 IHALCFSPNRYWLC-AATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFS-GY 290 (303)
Q Consensus 213 v~~~~~s~~~~~l~-~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~-gs 290 (303)
+.+++|+|++.+|+ ++.|+.|++||.+ ++....+...... -..+...+.++.|++++.++++ ++
T Consensus 195 v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~-------------~~~~~~~v~~v~w~~~~~~l~~~~~ 260 (434)
T 2oit_A 195 VTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFY-------------ESDHPVRVLDVLWIGTYVFAIVYAA 260 (434)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTC-------------CTTSCEEEEEEEEEETTEEEEEEEE
T ss_pred eeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCccc-------------CCCCceeEEEEEEecCceEEEEEcc
Confidence 99999999986554 5578999999998 4443333211100 0123456788999998877654 44
Q ss_pred cCCe------EEEEecc
Q 048118 291 TDGV------IRVWGIG 301 (303)
Q Consensus 291 ~Dg~------v~~w~~~ 301 (303)
.||. +++|++.
T Consensus 261 ~dg~~~~~~~v~i~~l~ 277 (434)
T 2oit_A 261 ADGTLETSPDVVMALLP 277 (434)
T ss_dssp TTCCSSSCCEEEEEECC
T ss_pred CCCccCCCCceEEEEec
Confidence 4543 8899874
No 143
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.86 E-value=5.7e-19 Score=147.92 Aligned_cols=229 Identities=15% Similarity=0.102 Sum_probs=154.6
Q ss_pred cCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEeeCCCEEEEEeC-
Q 048118 23 TPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSIDNRQIVSASR- 101 (303)
Q Consensus 23 ~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~~~~~l~t~~~- 101 (303)
|.+.....+++++.++.|.+||....+.. .. ...+...+ .++|+|+++++++++.
T Consensus 5 ~~~~~~~~~v~~~~~~~v~~~d~~~~~~~-----~~------------------~~~~~~~~-~~~~s~dg~~l~~~~~~ 60 (331)
T 3u4y_A 5 FQTTSNFGIVVEQHLRRISFFSTDTLEIL-----NQ------------------ITLGYDFV-DTAITSDCSNVVVTSDF 60 (331)
T ss_dssp --CCCCEEEEEEGGGTEEEEEETTTCCEE-----EE------------------EECCCCEE-EEEECSSSCEEEEEEST
T ss_pred EcCCCCEEEEEecCCCeEEEEeCccccee-----ee------------------EEccCCcc-eEEEcCCCCEEEEEeCC
Confidence 44555667999999999999998654321 10 11123445 8999999996666655
Q ss_pred CCcEEEEecCCcee-eeeecCCCCccceEEEEEcCCCCCCEEEEEeCCC---cEEEEECCCceeEEEEcCCCCCeeEEEE
Q 048118 102 DRTIKLWNTLGECK-YTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDR---TVKVWNLSNCKLRATLAGHTGYVNTVAV 177 (303)
Q Consensus 102 d~~i~vw~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~i~~~~~ 177 (303)
++.|.+||...... .... ..+..+..+++|+|++ ..++++..++ .|.+||+.+++....+..+ .....++|
T Consensus 61 ~~~i~~~d~~~~~~~~~~~--~~~~~~~~~~~~s~dg--~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~ 135 (331)
T 3u4y_A 61 CQTLVQIETQLEPPKVVAI--QEGQSSMADVDITPDD--QFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAI 135 (331)
T ss_dssp TCEEEEEECSSSSCEEEEE--EECSSCCCCEEECTTS--SEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEE
T ss_pred CCeEEEEECCCCceeEEec--ccCCCCccceEECCCC--CEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEE
Confidence 88999999865432 1111 1223334448999986 3555444442 8999999998887777654 45689999
Q ss_pred CCCCCEEEE-EeCCCe-EEEEeCCCCceE-----EEecCCCeEEEEEEcCCCeEE-EEE-cCCcEEEEeCCCCce---ee
Q 048118 178 SPDGSLCAS-GGKDGV-ILLWDLAEGKRL-----YSLDAGAVIHALCFSPNRYWL-CAA-TEQSIKIWDLESKSI---VE 245 (303)
Q Consensus 178 ~~~~~~l~~-~~~d~~-v~iwd~~~~~~~-----~~~~~~~~v~~~~~s~~~~~l-~~~-~~~~i~iwd~~~~~~---~~ 245 (303)
+|+|+++++ ...++. +.+|++.....+ ..+........++|+|++.++ ++. .++.|.+||+++++. +.
T Consensus 136 spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~ 215 (331)
T 3u4y_A 136 SPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLN 215 (331)
T ss_dssp CTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEE
T ss_pred CCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceee
Confidence 999985544 455678 999998754332 223445567899999999744 333 478899999988876 43
Q ss_pred eeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEe-ecCCeEEEEecc
Q 048118 246 DLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSG-YTDGVIRVWGIG 301 (303)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~g-s~Dg~v~~w~~~ 301 (303)
.+.. ...+..++|+|+|++|+++ ..++.|.+||+.
T Consensus 216 ~~~~---------------------~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~ 251 (331)
T 3u4y_A 216 AVGT---------------------NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQL 251 (331)
T ss_dssp EEEC---------------------SSCCCCEEECTTSSEEEEECSSEEEEEEEETT
T ss_pred eccC---------------------CCCCceEEECCCCCEEEEEEcCCCEEEEEECC
Confidence 3321 0123458899999976655 468899999975
No 144
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.86 E-value=2.3e-20 Score=168.64 Aligned_cols=238 Identities=16% Similarity=0.128 Sum_probs=157.7
Q ss_pred ccceeeeecCCCCCcEEEEecC-CCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceeccc-CCEEEEEEeeC
Q 048118 15 TDMVTAIATPIDNSDMIVTASR-DKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHT-KDVLSVAFSID 92 (303)
Q Consensus 15 ~~~v~~v~~~~~~~~~~~t~s~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~-~~i~~i~~~~~ 92 (303)
...|++++++|++ ++||+++. |++++||++...+ .. ++..|. ..+..++|+|+
T Consensus 21 ~~~~~~~~~~~DG-~~la~~s~~~g~~~lw~~~~g~-----~~-------------------~lt~~~~~~~~~~~~spd 75 (582)
T 3o4h_A 21 AVEKYSLQGVVDG-DKLLVVGFSEGSVNAYLYDGGE-----TV-------------------KLNREPINSVLDPHYGVG 75 (582)
T ss_dssp HSCEEEEEEEETT-TEEEEEEEETTEEEEEEEETTE-----EE-------------------ECCSSCCSEECEECTTCS
T ss_pred ccchheeecCCCC-CeEEEEEccCCceeEEEEcCCC-----cE-------------------eeecccccccccccCCCC
Confidence 4569999999986 57888877 9999999974221 11 112233 46778899998
Q ss_pred CCEEEEEeC---CCcEEEEec----CCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEEE
Q 048118 93 NRQIVSASR---DRTIKLWNT----LGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATL 165 (303)
Q Consensus 93 ~~~l~t~~~---d~~i~vw~~----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~ 165 (303)
+++++++. +...++|.. .+... .+... ......+|+|++....++++. ++.+.+||+.+++.....
T Consensus 76 -~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~----~~~~~~~~s~dg~~~~~~s~~-~~~~~l~d~~~g~~~~l~ 148 (582)
T 3o4h_A 76 -RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEAV----KPMRILSGVDTGEAVVFTGAT-EDRVALYALDGGGLRELA 148 (582)
T ss_dssp -EEEEEEECSTTSCCEEEEEEETTSTTCCE-ECTTS----CSBEEEEEEECSSCEEEEEEC-SSCEEEEEEETTEEEEEE
T ss_pred -eEEEEeccCCCCcceEEEEEeccCCCccc-cccCC----CCceeeeeCCCCCeEEEEecC-CCCceEEEccCCcEEEee
Confidence 77777765 455677654 22221 22111 123356788876443444444 445559999888765544
Q ss_pred cCCCCCeeEEEECCCCCEEEEEeCC----CeEEEEeCCCCceEEEecCCCeEEEEEEcCCCeEEEEE-cCC--cEEEEeC
Q 048118 166 AGHTGYVNTVAVSPDGSLCASGGKD----GVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAA-TEQ--SIKIWDL 238 (303)
Q Consensus 166 ~~~~~~i~~~~~~~~~~~l~~~~~d----~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~~--~i~iwd~ 238 (303)
..+ . .+++|+|||+.|++++.+ +.|++||+.+++..........+..++|||||.+++.+ .++ .|++||+
T Consensus 149 ~~~-~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~ 225 (582)
T 3o4h_A 149 RLP-G--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDP 225 (582)
T ss_dssp EES-S--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECT
T ss_pred cCC-C--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcC
Confidence 332 2 789999999999988877 78999999888765333445678999999999887754 356 7999999
Q ss_pred CCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEec
Q 048118 239 ESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 300 (303)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~ 300 (303)
++++.. .+...... .. ... ........|+|||.++++++.||++++|++
T Consensus 226 ~~~~~~-~~~~~~~~------~~----~~~--~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 226 RDGSVE-DLELPSKD------FS----SYR--PTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp TTCCEE-ECCCSCSH------HH----HHC--CSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred CCCcEE-EccCCCcC------hh----hhh--hccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 887654 22110000 00 000 011223459999999999999999999986
No 145
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.85 E-value=1.1e-18 Score=155.99 Aligned_cols=233 Identities=15% Similarity=0.160 Sum_probs=164.3
Q ss_pred ecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEeeCCCEEEEEeC
Q 048118 22 ATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSIDNRQIVSASR 101 (303)
Q Consensus 22 ~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~~~~~l~t~~~ 101 (303)
.++|++ .++++++.|++|.+||....+. ...+. .++. +..++|+|+|+++++++.
T Consensus 144 ~~~p~~-~~~vs~~~d~~V~v~D~~t~~~-----~~~i~-----------------~g~~--~~~v~~spdg~~l~v~~~ 198 (543)
T 1nir_A 144 DLDLPN-LFSVTLRDAGQIALVDGDSKKI-----VKVID-----------------TGYA--VHISRMSASGRYLLVIGR 198 (543)
T ss_dssp CCCGGG-EEEEEEGGGTEEEEEETTTCCE-----EEEEE-----------------CSTT--EEEEEECTTSCEEEEEET
T ss_pred ccCCCC-EEEEEEcCCCeEEEEECCCceE-----EEEEe-----------------cCcc--cceEEECCCCCEEEEECC
Confidence 367754 6899999999999999865431 11111 0222 788999999999999999
Q ss_pred CCcEEEEec--CCcee-eeeecCCCCccceEEEEEcC----CCCCCEEEEEe-CCCcEEEEECCCceeEEEEcCC-----
Q 048118 102 DRTIKLWNT--LGECK-YTIQEGDAHTEWVSCVRFSP----NTLQPTIVSAS-WDRTVKVWNLSNCKLRATLAGH----- 168 (303)
Q Consensus 102 d~~i~vw~~--~~~~~-~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~-~dg~i~iwd~~~~~~~~~~~~~----- 168 (303)
|+.|++||+ ..... ..+. ....+..++|+| ++ ..+++++ .++.|.+||..+.++...+..+
T Consensus 199 d~~V~v~D~~~~t~~~~~~i~----~g~~p~~va~sp~~~~dg--~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~ 272 (543)
T 1nir_A 199 DARIDMIDLWAKEPTKVAEIK----IGIEARSVESSKFKGYED--RYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVD 272 (543)
T ss_dssp TSEEEEEETTSSSCEEEEEEE----CCSEEEEEEECCSTTCTT--TEEEEEEEESSEEEEEETTTCCEEEEEECCEECSS
T ss_pred CCeEEEEECcCCCCcEEEEEe----cCCCcceEEeCCCcCCCC--CEEEEEEccCCeEEEEeccccccceeecccCcccC
Confidence 999999998 43222 2222 233478999999 76 3566655 5899999999998888777542
Q ss_pred ------CCCeeEEEECCCCCE-EEEEeCCCeEEEEeCCCCceEE--EecCCCeEEEEEEcCCCeEEE-EE-cCCcEEEEe
Q 048118 169 ------TGYVNTVAVSPDGSL-CASGGKDGVILLWDLAEGKRLY--SLDAGAVIHALCFSPNRYWLC-AA-TEQSIKIWD 237 (303)
Q Consensus 169 ------~~~i~~~~~~~~~~~-l~~~~~d~~v~iwd~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~-~~-~~~~i~iwd 237 (303)
...+..+.++|++.. +++...+++|.+||..+.+.+. .+.....+..++|+|++.++. ++ .++.|.+||
T Consensus 273 ~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D 352 (543)
T 1nir_A 273 TQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVID 352 (543)
T ss_dssp SCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEE
T ss_pred ccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEE
Confidence 236889999997765 4566679999999998765443 455566678899999987544 43 478999999
Q ss_pred CCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCC-CCEEEEee-cCCeEEEEeccc
Q 048118 238 LESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVD-GSTLFSGY-TDGVIRVWGIGR 302 (303)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~-~~~l~~gs-~Dg~v~~w~~~~ 302 (303)
+++++++..+.....+ |......+ ++|+ +..+++++ .|++|.+||+..
T Consensus 353 ~~tg~l~~~i~~g~~p----------------h~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 353 SKDRRLSALVDVGKTP----------------HPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp TTTTEEEEEEECSSSB----------------CCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred CCCCeEEEeeccCCCC----------------CCCCCccc-CCCCCccEEEeccCCCceEEEEEeCC
Confidence 9999887765431100 00011122 4677 56677765 689999999853
No 146
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.85 E-value=4e-18 Score=143.79 Aligned_cols=236 Identities=11% Similarity=0.076 Sum_probs=164.5
Q ss_pred cceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCce-ecccCCEEEEEEeeCCC
Q 048118 16 DMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQF-VGHTKDVLSVAFSIDNR 94 (303)
Q Consensus 16 ~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~h~~~i~~i~~~~~~~ 94 (303)
..+..+.++|++..++++...++.|.+||....+.. ..+..+.. ... ......+..++|+|+++
T Consensus 89 ~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~-----~~~~~~~~----------~~~~~~~~~~~~~~~~s~dg~ 153 (353)
T 3vgz_A 89 LKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVK-----GRLVLDDR----------KRTEEVRPLQPRELVADDATN 153 (353)
T ss_dssp SCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEE-----EEEESCCC----------CCCSSCCCCEEEEEEEETTTT
T ss_pred CCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeE-----EEEecCCC----------ccccccCCCCCceEEECCCCC
Confidence 346778899887667778888899999998654321 11110000 000 00011267899999999
Q ss_pred EEEEEe--CCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEEEcC----C
Q 048118 95 QIVSAS--RDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAG----H 168 (303)
Q Consensus 95 ~l~t~~--~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~----~ 168 (303)
++++++ .++.|.+||.......... ..+...+.++.|+|++ ..+++++.++.|.+||+.+++....+.. +
T Consensus 154 ~l~~~~~~~~~~i~~~d~~~~~~~~~~--~~~~~~~~~~~~s~dg--~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~ 229 (353)
T 3vgz_A 154 TVYISGIGKESVIWVVDGGNIKLKTAI--QNTGKMSTGLALDSEG--KRLYTTNADGELITIDTADNKILSRKKLLDDGK 229 (353)
T ss_dssp EEEEEEESSSCEEEEEETTTTEEEEEE--CCCCTTCCCCEEETTT--TEEEEECTTSEEEEEETTTTEEEEEEECCCSSS
T ss_pred EEEEEecCCCceEEEEcCCCCceEEEe--cCCCCccceEEECCCC--CEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCC
Confidence 777665 4788999998654332222 1123336778899986 4677788899999999999887776654 4
Q ss_pred CCCeeEEEECCCCCEEEEEeC-CCeEEEEeCCCCceEEEecCCCeEEEEEEcCCCeEE-EEE-cCCcEEEEeCCCCceee
Q 048118 169 TGYVNTVAVSPDGSLCASGGK-DGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWL-CAA-TEQSIKIWDLESKSIVE 245 (303)
Q Consensus 169 ~~~i~~~~~~~~~~~l~~~~~-d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~-~~~~i~iwd~~~~~~~~ 245 (303)
...+..++|+|+++.+++++. ++.|.+||+.+++.+..+..... ..++|+|++..+ ++. .++.|.+||.++++.+.
T Consensus 230 ~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~ 308 (353)
T 3vgz_A 230 EHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPES-LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVK 308 (353)
T ss_dssp CCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSC-CCEEEETTTTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC-ceEEECCCCCEEEEEECCCCeEEEEECCCCeEEE
Confidence 456788999999997766654 59999999999988877765443 568999998644 444 47899999999888766
Q ss_pred eeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecC
Q 048118 246 DLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTD 292 (303)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~D 292 (303)
.+... ..+..++|+|++++|+++..+
T Consensus 309 ~~~~~---------------------~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 309 TFDTP---------------------THPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp EEECC---------------------SEEEEEEECTTSCEEEEEEEC
T ss_pred EEecC---------------------CCCCeEEEcCCCCEEEEEEcc
Confidence 54321 134678999999987777665
No 147
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.85 E-value=2.1e-19 Score=172.64 Aligned_cols=254 Identities=14% Similarity=0.125 Sum_probs=182.6
Q ss_pred ccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCcee------------
Q 048118 11 MRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFV------------ 78 (303)
Q Consensus 11 ~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~------------ 78 (303)
+.+|...+.++.|+++ .++++++.|+++++|.+...... ...+..+.. +....++|+++..
T Consensus 199 l~~~~~~v~~~~~s~d--~l~~~~~~dg~~~l~~~~~~g~~----~~~l~~~~~-~~~~~~SpDG~~la~~~~~~i~~~d 271 (1045)
T 1k32_A 199 IVDMSTHVSSPVIVGH--RIYFITDIDGFGQIYSTDLDGKD----LRKHTSFTD-YYPRHLNTDGRRILFSKGGSIYIFN 271 (1045)
T ss_dssp EECCSSCCEEEEEETT--EEEEEECTTSSCEEEEEETTSCS----CEECCCCCS-SCEEEEEESSSCEEEEETTEEEEEC
T ss_pred CcCCCCcccceEEeCC--EEEEEEeccCceEEEEEeCCCCc----ceEecCCCC-cceeeEcCCCCEEEEEeCCEEEEec
Confidence 4678889999999865 67788888999999987532211 111222221 2233455554311
Q ss_pred ---------------------cccCCEEEEEEe-eCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCcc-ceEEEEEcC
Q 048118 79 ---------------------GHTKDVLSVAFS-IDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTE-WVSCVRFSP 135 (303)
Q Consensus 79 ---------------------~h~~~i~~i~~~-~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~-~i~~~~~~~ 135 (303)
.|...+..++|+ |+|+++++++ ++.|.+|+........+ ..+.. .+..++|+
T Consensus 272 ~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~---~~~~~~~~~~~~~s- 346 (1045)
T 1k32_A 272 PDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKV---PEPLRIRYVRRGGD- 346 (1045)
T ss_dssp TTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEEC---SCCSCEEEEEECSS-
T ss_pred CCceEeeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEc---cCCCcceEEeeeEc-
Confidence 133468899999 9999998887 78899999765432222 23444 68889999
Q ss_pred CCCCCEEEEEeCCCcEE-EEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEe-cCCCeE
Q 048118 136 NTLQPTIVSASWDRTVK-VWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL-DAGAVI 213 (303)
Q Consensus 136 ~~~~~~~~~~~~dg~i~-iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~-~~~~~v 213 (303)
++ ..+++++.++.+. +||+.+++... +.+|...+..++|+|+|++|++++.++.|++||+.+++..... .....+
T Consensus 347 dg--~~l~~~s~~~~l~~~~d~~~~~~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v 423 (1045)
T 1k32_A 347 TK--VAFIHGTREGDFLGIYDYRTGKAEK-FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMI 423 (1045)
T ss_dssp SE--EEEEEEETTEEEEEEEETTTCCEEE-CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCC
T ss_pred CC--CeEEEEECCCceEEEEECCCCCceE-ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCc
Confidence 65 3577777788888 89988766543 4477788999999999999999999999999999988876555 445667
Q ss_pred EEEEEcCCCeEEEEEc-C----------CcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCC
Q 048118 214 HALCFSPNRYWLCAAT-E----------QSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVD 282 (303)
Q Consensus 214 ~~~~~s~~~~~l~~~~-~----------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~ 282 (303)
..++|+|++.+++.+. + +.|++||+.+++. ..+. .+...+..++|+|+
T Consensus 424 ~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~-~~l~--------------------~~~~~~~~~~~spd 482 (1045)
T 1k32_A 424 TDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKI-FAAT--------------------TENSHDYAPAFDAD 482 (1045)
T ss_dssp CCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEE-EECS--------------------CSSSBEEEEEECTT
T ss_pred cceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcE-EEee--------------------CCCcccCCceEcCC
Confidence 8899999998776543 3 3899999987752 2221 12223456889999
Q ss_pred CCEEEEeecCCeEEEEec
Q 048118 283 GSTLFSGYTDGVIRVWGI 300 (303)
Q Consensus 283 ~~~l~~gs~Dg~v~~w~~ 300 (303)
|++|++++.++..++|+.
T Consensus 483 G~~l~~~s~~~~~~~~~~ 500 (1045)
T 1k32_A 483 SKNLYYLSYRSLDPSPDR 500 (1045)
T ss_dssp SCEEEEEESCCCCCEECS
T ss_pred CCEEEEEecccCCcCcch
Confidence 999999999988888864
No 148
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.82 E-value=8.9e-17 Score=136.39 Aligned_cols=246 Identities=13% Similarity=0.177 Sum_probs=154.4
Q ss_pred cccceeeeecCCCCCcEEEEecCC----CcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEE
Q 048118 14 HTDMVTAIATPIDNSDMIVTASRD----KSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAF 89 (303)
Q Consensus 14 h~~~v~~v~~~~~~~~~~~t~s~d----~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~ 89 (303)
+...+..++|+|++ ++|++++.+ +.+.+|++......... .. ....+...+..+++
T Consensus 48 ~~~~p~~l~~spdg-~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~-~~------------------~~~~~~~~p~~~~~ 107 (361)
T 3scy_A 48 EVANPSYLIPSADG-KFVYSVNEFSKDQAAVSAFAFDKEKGTLHL-LN------------------TQKTMGADPCYLTT 107 (361)
T ss_dssp ECSCCCSEEECTTS-SEEEEEECCSSTTCEEEEEEEETTTTEEEE-EE------------------EEECSSSCEEEEEE
T ss_pred cCCCCceEEECCCC-CEEEEEEccCCCCCcEEEEEEeCCCCcEEE-ee------------------EeccCCCCcEEEEE
Confidence 45567788999876 567777775 79999998653111100 00 01123345566777
Q ss_pred eeCCCEEEEEe-CCCcEEEEecCCceee-ee---ecC--------CCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEEC
Q 048118 90 SIDNRQIVSAS-RDRTIKLWNTLGECKY-TI---QEG--------DAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNL 156 (303)
Q Consensus 90 ~~~~~~l~t~~-~d~~i~vw~~~~~~~~-~~---~~~--------~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~ 156 (303)
+++++++++ .++.|.+|++...... .. ... ..+...+.+++|+|++. ..+++...++.|++|++
T Consensus 108 --dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~-~l~~~~~~~~~v~v~~~ 184 (361)
T 3scy_A 108 --NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGK-YLLADDLGTDQIHKFNI 184 (361)
T ss_dssp --CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSS-EEEEEETTTTEEEEEEE
T ss_pred --CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCC-EEEEEeCCCCEEEEEEE
Confidence 777776665 6789999997532111 00 000 01122357899999873 24455556889999988
Q ss_pred CCce-------eE------EEEcCCCCCeeEEEECCCCCEEEEEe-CCCeEEEEeCCCCce--EEEec----CCCeEEEE
Q 048118 157 SNCK-------LR------ATLAGHTGYVNTVAVSPDGSLCASGG-KDGVILLWDLAEGKR--LYSLD----AGAVIHAL 216 (303)
Q Consensus 157 ~~~~-------~~------~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~v~iwd~~~~~~--~~~~~----~~~~v~~~ 216 (303)
.... +. ............++|+|+|+++++++ .++.|.+||+.+++. +..+. .......+
T Consensus 185 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i 264 (361)
T 3scy_A 185 NPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDI 264 (361)
T ss_dssp CTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEE
T ss_pred cCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccE
Confidence 6432 21 11222345678899999999887776 689999999987643 22222 12346789
Q ss_pred EEcCCCeEEEEE-c--CCcEEEEeCC--CCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEee-
Q 048118 217 CFSPNRYWLCAA-T--EQSIKIWDLE--SKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGY- 290 (303)
Q Consensus 217 ~~s~~~~~l~~~-~--~~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs- 290 (303)
+|+|++.+|+++ . ++.|.+|++. ++++...... .. ...+..++|+|+|++|++++
T Consensus 265 ~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~------------------~~-g~~~~~~~~spdg~~l~~~~~ 325 (361)
T 3scy_A 265 HLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQ------------------LT-GIHPRNFIITPNGKYLLVACR 325 (361)
T ss_dssp EECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEE------------------EC-SSCCCEEEECTTSCEEEEEET
T ss_pred EECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEe------------------cC-CCCCceEEECCCCCEEEEEEC
Confidence 999999866444 3 4789999985 3332111110 00 11235689999999888887
Q ss_pred cCCeEEEEecc
Q 048118 291 TDGVIRVWGIG 301 (303)
Q Consensus 291 ~Dg~v~~w~~~ 301 (303)
.++.|.+|.++
T Consensus 326 ~~~~v~v~~~d 336 (361)
T 3scy_A 326 DTNVIQIFERD 336 (361)
T ss_dssp TTTEEEEEEEC
T ss_pred CCCCEEEEEEE
Confidence 67999998653
No 149
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.82 E-value=5.3e-18 Score=156.46 Aligned_cols=254 Identities=13% Similarity=0.152 Sum_probs=158.2
Q ss_pred ccccceeeeecCCCCCcEEEEecCCCcEEEEEccc-----CccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEE
Q 048118 13 AHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTK-----EEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSV 87 (303)
Q Consensus 13 ~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~-----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i 87 (303)
.+...+..++|+|++ ++|+++ .|+.|.+|++.. .+.. .....+...+..-. + .+..+...+.++
T Consensus 118 ~~~~~~~~~~~SpdG-~~la~~-~~~~i~v~~~~~~~~~~g~~~-----~~~~~~~~~~~~g~--~--~~~ee~~~~~~~ 186 (706)
T 2z3z_A 118 DTNEETASLDFSPVG-DRVAYV-RNHNLYIARGGKLGEGMSRAI-----AVTIDGTETLVYGQ--A--VHQREFGIEKGT 186 (706)
T ss_dssp CCTTCCTTCEECTTS-SEEEEE-ETTEEEEEECBCTTSCCCCCE-----ESCSCCBTTEEESS--C--CGGGCTTCCCSE
T ss_pred CCcccccCCcCCCCC-CEEEEE-ECCeEEEEecCcccccCCCcE-----EeccCCCCCeEccc--c--hhhhhcCCCceE
Confidence 344556777787765 456653 567788887754 2211 00000000000000 0 011112235789
Q ss_pred EEeeCCCEEEEEe---------------------------------CCCcEEEEecCCceeeeeecCCCCccceEEEEEc
Q 048118 88 AFSIDNRQIVSAS---------------------------------RDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFS 134 (303)
Q Consensus 88 ~~~~~~~~l~t~~---------------------------------~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~ 134 (303)
.|+|+|++|++++ .+..|.+||+.+.....+.....+...+.+++|+
T Consensus 187 ~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~s 266 (706)
T 2z3z_A 187 FWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWS 266 (706)
T ss_dssp EECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEEC
T ss_pred EECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEE
Confidence 9999999999887 4467999998665433333223456678999999
Q ss_pred CCCCCCEEEEEeCCC-----cEEEEECCCc-eeEEEEcC-CC---CCeeEEEECC--CCCEEEEEeCCCeEEEEeCC-CC
Q 048118 135 PNTLQPTIVSASWDR-----TVKVWNLSNC-KLRATLAG-HT---GYVNTVAVSP--DGSLCASGGKDGVILLWDLA-EG 201 (303)
Q Consensus 135 ~~~~~~~~~~~~~dg-----~i~iwd~~~~-~~~~~~~~-~~---~~i~~~~~~~--~~~~l~~~~~d~~v~iwd~~-~~ 201 (303)
|++ ..+++++.++ .|++||+.++ ........ +. ..+..+.|+| +|+++++++.|+.+++|++. ++
T Consensus 267 pdg--~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~ 344 (706)
T 2z3z_A 267 PDE--NILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTG 344 (706)
T ss_dssp TTS--SEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTS
T ss_pred CCC--CEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCC
Confidence 987 3567666665 8999999888 43332221 22 2346789999 99999999999999999876 55
Q ss_pred ceEEEecC-CCeEEE-EEEcCCCeEEE-EEc-CC----cEEEEeCCCCceeeeeeeccccccccccCccceeecccccee
Q 048118 202 KRLYSLDA-GAVIHA-LCFSPNRYWLC-AAT-EQ----SIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIY 273 (303)
Q Consensus 202 ~~~~~~~~-~~~v~~-~~~s~~~~~l~-~~~-~~----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (303)
..+..+.. ...+.. ++|+|++..++ ++. ++ .|+.||+++++. ..+. +...
T Consensus 345 ~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~-~~l~---------------------~~~~ 402 (706)
T 2z3z_A 345 RLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKT-KDLT---------------------PESG 402 (706)
T ss_dssp CEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCC-EESC---------------------CSSS
T ss_pred CEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCc-eecc---------------------CCCc
Confidence 55555543 334655 79999986554 333 33 677777766542 1111 0112
Q ss_pred EEEEEEcCCCCEEEEeecC----CeEEEEecc
Q 048118 274 CTSLNWSVDGSTLFSGYTD----GVIRVWGIG 301 (303)
Q Consensus 274 ~~~~~~sp~~~~l~~gs~D----g~v~~w~~~ 301 (303)
+.+++|||+|++|+.++.+ +.+.+||+.
T Consensus 403 ~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~ 434 (706)
T 2z3z_A 403 MHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIG 434 (706)
T ss_dssp EEEEEECTTSSEEEEEEECSSCSCEEEEEESS
T ss_pred eEEEEECCCCCEEEEEecCCCCCcEEEEEECC
Confidence 4578999999988876554 569999874
No 150
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.80 E-value=6.8e-18 Score=156.55 Aligned_cols=235 Identities=10% Similarity=0.071 Sum_probs=157.1
Q ss_pred ceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEeeCCCEE
Q 048118 17 MVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSIDNRQI 96 (303)
Q Consensus 17 ~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~~~~~l 96 (303)
.|..++|+|++ ++|++++. +.|.+|++...... .. .++..|...+..++|+|+|++|
T Consensus 110 ~v~~~~~SpDg-~~l~~~~~-~~i~~~d~~~~~~~---~~------------------~~l~~~~~~~~~~~~SPDG~~l 166 (741)
T 2ecf_A 110 GIVDYQWSPDA-QRLLFPLG-GELYLYDLKQEGKA---AV------------------RQLTHGEGFATDAKLSPKGGFV 166 (741)
T ss_dssp ESCCCEECTTS-SEEEEEET-TEEEEEESSSCSTT---SC------------------CBCCCSSSCEEEEEECTTSSEE
T ss_pred CcceeEECCCC-CEEEEEeC-CcEEEEECCCCCcc---eE------------------EEcccCCcccccccCCCCCCEE
Confidence 47899999986 57777776 89999998654100 00 0233466778999999999999
Q ss_pred EEEeCCCcEEEEecCCceeeeeecCCCCcc----------------ceEEEEEcCCCCCCEEEEEeCCC-----------
Q 048118 97 VSASRDRTIKLWNTLGECKYTIQEGDAHTE----------------WVSCVRFSPNTLQPTIVSASWDR----------- 149 (303)
Q Consensus 97 ~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~----------------~i~~~~~~~~~~~~~~~~~~~dg----------- 149 (303)
+.++. +.|.+||..+.....+.. .+.. .+.+++|+|++. .+++++.|+
T Consensus 167 a~~~~-~~i~~~d~~~g~~~~~~~--~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~--~l~~~~~d~~~~~~~~~~~~ 241 (741)
T 2ecf_A 167 SFIRG-RNLWVIDLASGRQMQLTA--DGSTTIGNGIAEFVADEEMDRHTGYWWAPDDS--AIAYARIDESPVPVQKRYEV 241 (741)
T ss_dssp EEEET-TEEEEEETTTTEEEECCC--CCCSSEEESCCCHHHHHHSCCCCSEEECTTSS--CEEEEEEECTTSCEEEEEEE
T ss_pred EEEeC-CcEEEEecCCCCEEEecc--CCccceeccccceeeeeccccccceEECCCCC--EEEEEEEcCCCCceEecCCC
Confidence 98874 689999986543322221 1111 136789999973 466665554
Q ss_pred ----------------------cEEEEECCC-ceeEEEEc--CCCCCeeEEEECCCCCEEEEEeC-----CCeEEEEeCC
Q 048118 150 ----------------------TVKVWNLSN-CKLRATLA--GHTGYVNTVAVSPDGSLCASGGK-----DGVILLWDLA 199 (303)
Q Consensus 150 ----------------------~i~iwd~~~-~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~-----d~~v~iwd~~ 199 (303)
.|++||+.+ ++...... .|...+..++| |+|+.|++++. +..|.+||+.
T Consensus 242 ~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~ 320 (741)
T 2ecf_A 242 YADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLA 320 (741)
T ss_dssp CSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETT
T ss_pred CCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECC
Confidence 788899988 76554332 36678899999 99999887653 5689999999
Q ss_pred CCceEEEecC--CC---eEEEEEEcCCCeEEEEE-cCCcEEEEeCC-CCceeeeeeeccccccccccCccceeeccccce
Q 048118 200 EGKRLYSLDA--GA---VIHALCFSPNRYWLCAA-TEQSIKIWDLE-SKSIVEDLKVDLKTEAEKSEATTATTTIKKKNI 272 (303)
Q Consensus 200 ~~~~~~~~~~--~~---~v~~~~~s~~~~~l~~~-~~~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (303)
+++....+.. .. .+..++|+|++.+++++ .++.+.+|.++ .++ ...+. .+..
T Consensus 321 ~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~--------------------~~~~ 379 (741)
T 2ecf_A 321 SNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALT--------------------HGNW 379 (741)
T ss_dssp TCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESC--------------------CSSS
T ss_pred CCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeee--------------------ecce
Confidence 8876544422 11 34578999999866655 46666666543 222 22221 1122
Q ss_pred eEEEE-EEcCCCCEEE-EeecCC--eEEEEecc
Q 048118 273 YCTSL-NWSVDGSTLF-SGYTDG--VIRVWGIG 301 (303)
Q Consensus 273 ~~~~~-~~sp~~~~l~-~gs~Dg--~v~~w~~~ 301 (303)
.+..+ .|+|+++.|+ +++.|+ .+++|++.
T Consensus 380 ~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~ 412 (741)
T 2ecf_A 380 SVDELLAVDEKAGLAYFRAGIESARESQIYAVP 412 (741)
T ss_dssp CEEEEEEEETTTTEEEEEECSSCTTCBEEEEEE
T ss_pred EEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEE
Confidence 23455 5999998765 555566 89999874
No 151
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.80 E-value=3.4e-18 Score=158.11 Aligned_cols=245 Identities=10% Similarity=0.092 Sum_probs=158.0
Q ss_pred cccccc---ceeeeecCCCCCcEEEEecCC---------CcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCcee
Q 048118 11 MRAHTD---MVTAIATPIDNSDMIVTASRD---------KSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFV 78 (303)
Q Consensus 11 ~~~h~~---~v~~v~~~~~~~~~~~t~s~d---------~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 78 (303)
+.+|.. .|..++|+|++ ++|++++.+ +.+.+||+...... .+. ...
T Consensus 53 ~~~~~~~~~~v~~~~~SpDg-~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~------~l~---------------~~~ 110 (723)
T 1xfd_A 53 IEGKKIESLRAIRYEISPDR-EYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQ------SLD---------------PPE 110 (723)
T ss_dssp ECTTTTTTTTCSEEEECTTS-SEEEEEESCCCCSSSCCCSEEEEEESSSCCCE------ECC---------------CTT
T ss_pred eccccccccccceEEECCCC-CEEEEEecCccceeecceeeEEEEECCCCceE------ecc---------------CCc
Confidence 444543 38999999986 578888765 77889998654310 111 011
Q ss_pred cccCCEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCcc------------------ceEEEEEcCCCCCC
Q 048118 79 GHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTE------------------WVSCVRFSPNTLQP 140 (303)
Q Consensus 79 ~h~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~------------------~i~~~~~~~~~~~~ 140 (303)
+|...+..++|+|+|++|+.++. +.|.+|+..+.....+.. .+.. .+.+++|+|++ .
T Consensus 111 ~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~--~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg--~ 185 (723)
T 1xfd_A 111 VSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVS--TGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDG--T 185 (723)
T ss_dssp CCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEEC--CCBTTTEEEEECCHHHHHTTSSSSEEEEECTTS--S
T ss_pred cccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEec--CCCCCceECcccceeEEEEeccCcceEEECCCC--C
Confidence 34445778999999999998886 789999986543322221 1111 23789999997 3
Q ss_pred EEEEEeCCC----------------------------------cEEEEECCCceeEEEEcCC------CCCeeEEEECCC
Q 048118 141 TIVSASWDR----------------------------------TVKVWNLSNCKLRATLAGH------TGYVNTVAVSPD 180 (303)
Q Consensus 141 ~~~~~~~dg----------------------------------~i~iwd~~~~~~~~~~~~~------~~~i~~~~~~~~ 180 (303)
.+++++.++ .|++||+.+++....+..+ ...+..++|+||
T Consensus 186 ~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpD 265 (723)
T 1xfd_A 186 RLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATS 265 (723)
T ss_dssp EEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSS
T ss_pred EEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCC
Confidence 566665432 7999999887755555543 567889999999
Q ss_pred CCEEEEEeC----CCeEEEEeCCCCceEEEec--CCCeE----EEEEEcCCCeEEEE--E-cCC------cEEEEe-CCC
Q 048118 181 GSLCASGGK----DGVILLWDLAEGKRLYSLD--AGAVI----HALCFSPNRYWLCA--A-TEQ------SIKIWD-LES 240 (303)
Q Consensus 181 ~~~l~~~~~----d~~v~iwd~~~~~~~~~~~--~~~~v----~~~~~s~~~~~l~~--~-~~~------~i~iwd-~~~ 240 (303)
|+++++.+. +..|++||+.+++...... ....+ ..++|+|+|..++. + .++ .|++|| ..+
T Consensus 266 g~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~ 345 (723)
T 1xfd_A 266 TKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPN 345 (723)
T ss_dssp SEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCC
T ss_pred CeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCC
Confidence 998876643 3589999999887654332 22222 36799999875543 2 355 577787 333
Q ss_pred Cce--eeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecC---CeEEEEecc
Q 048118 241 KSI--VEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTD---GVIRVWGIG 301 (303)
Q Consensus 241 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~D---g~v~~w~~~ 301 (303)
++. ...+. .........++|+|||+.|+..+.+ +.+++|++.
T Consensus 346 ~~~~~~~~l~-------------------~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~ 392 (723)
T 1xfd_A 346 SSNDNIQSIT-------------------SGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSAN 392 (723)
T ss_dssp SSSCCCCBSC-------------------CSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEEC
T ss_pred CCccceeEee-------------------cCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEe
Confidence 320 11111 0011112236899999998765554 889999874
No 152
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.80 E-value=6.8e-18 Score=155.71 Aligned_cols=249 Identities=14% Similarity=0.125 Sum_probs=154.8
Q ss_pred eeeeecCCCCCcEEEEecCCCcEEEEEcccCccc-cceeeeeecCCCcceEEEEeCC-CCceecccCCEEEEEEeeCCCE
Q 048118 18 VTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKT-YGVARRRLTGHSHFVQDVVLSS-DGQFVGHTKDVLSVAFSIDNRQ 95 (303)
Q Consensus 18 v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~-~~~~~~h~~~i~~i~~~~~~~~ 95 (303)
+..+.|. + +.+++++.|+ | +||...++.. ... +. +..... .+++ ++....+...|.+++|+|+ ..
T Consensus 28 ~~~~~w~--g-~~~~~~~~~~-i-~~d~~tg~~~~~~l----~~-~~~~~~--~l~~~~~~~~~~~~~v~~~~~spd-~~ 94 (706)
T 2z3z_A 28 VVGLQWM--G-DNYVFIEGDD-L-VFNKANGKSAQTTR----FS-AADLNA--LMPEGCKFQTTDAFPSFRTLDAGR-GL 94 (706)
T ss_dssp CTTCEEE--T-TEEEEEETTE-E-EEEC-------CEE----EE-HHHHHT--TC-----------CCCEEEEETTT-TE
T ss_pred CCCCcCc--C-CeEEEEeCCc-E-EEECCCCcEeeEEe----ec-hhHhhh--hccchhccccccccCceeEEECCC-Ce
Confidence 5566776 3 4577777788 8 9998765431 100 00 000000 0000 0001122356899999999 66
Q ss_pred EEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCC-----ceeEEEEcCCCC
Q 048118 96 IVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSN-----CKLRATLAGHTG 170 (303)
Q Consensus 96 l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~-----~~~~~~~~~~~~ 170 (303)
++.+ .++.|++||+.+....... .+...+.+++|+|++ ..+++ ..++.|++||+.+ ++.......+..
T Consensus 95 ~~~~-~~~~i~~~d~~~~~~~~l~---~~~~~~~~~~~SpdG--~~la~-~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~ 167 (706)
T 2z3z_A 95 VVLF-TQGGLVGFDMLARKVTYLF---DTNEETASLDFSPVG--DRVAY-VRNHNLYIARGGKLGEGMSRAIAVTIDGTE 167 (706)
T ss_dssp EEEE-ETTEEEEEETTTTEEEEEE---CCTTCCTTCEECTTS--SEEEE-EETTEEEEEECBCTTSCCCCCEESCSCCBT
T ss_pred EEEE-ECCEEEEEECCCCceEEcc---CCcccccCCcCCCCC--CEEEE-EECCeEEEEecCcccccCCCcEEeccCCCC
Confidence 5555 4599999998665433322 123446778999987 35666 4789999999987 765543333333
Q ss_pred C--------------eeEEEECCCCCEEEEEe---------------------------------CCCeEEEEeCCCCce
Q 048118 171 Y--------------VNTVAVSPDGSLCASGG---------------------------------KDGVILLWDLAEGKR 203 (303)
Q Consensus 171 ~--------------i~~~~~~~~~~~l~~~~---------------------------------~d~~v~iwd~~~~~~ 203 (303)
. +.++.|+|||++|++++ .+..|++||+.+++.
T Consensus 168 ~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~ 247 (706)
T 2z3z_A 168 TLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKT 247 (706)
T ss_dssp TEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEE
T ss_pred CeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCce
Confidence 2 47899999999999887 457899999998875
Q ss_pred EEEe---cCCCeEEEEEEcCCCeEEEE-EcCC-----cEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeE
Q 048118 204 LYSL---DAGAVIHALCFSPNRYWLCA-ATEQ-----SIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYC 274 (303)
Q Consensus 204 ~~~~---~~~~~v~~~~~s~~~~~l~~-~~~~-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (303)
.... .....+..++|+|++..++. +.++ .|++||+++++....+.... ... ....+
T Consensus 248 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~------~~~---------~~~~~ 312 (706)
T 2z3z_A 248 VYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVET------DKH---------YVEPL 312 (706)
T ss_dssp EECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEE------CSS---------CCCCC
T ss_pred EeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEcc------CCC---------eECcc
Confidence 4433 23467899999999976655 3443 89999998874333221100 000 00012
Q ss_pred EEEEEcC--CCCEEEEeecCCeEEEEecc
Q 048118 275 TSLNWSV--DGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 275 ~~~~~sp--~~~~l~~gs~Dg~v~~w~~~ 301 (303)
..+.|+| +|++|++++.||.+++|.+.
T Consensus 313 ~~~~~sp~~dg~~l~~~~~~g~~~l~~~~ 341 (706)
T 2z3z_A 313 HPLTFLPGSNNQFIWQSRRDGWNHLYLYD 341 (706)
T ss_dssp SCCEECTTCSSEEEEEECTTSSCEEEEEE
T ss_pred CCceeecCCCCEEEEEEccCCccEEEEEE
Confidence 3478999 99999999999999999764
No 153
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.80 E-value=4.5e-17 Score=156.47 Aligned_cols=235 Identities=10% Similarity=0.023 Sum_probs=169.6
Q ss_pred cccccc-ceeeeecCCCCCcEEEEecCCCcEE-EEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEE
Q 048118 11 MRAHTD-MVTAIATPIDNSDMIVTASRDKSII-VWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVA 88 (303)
Q Consensus 11 ~~~h~~-~v~~v~~~~~~~~~~~t~s~d~~i~-iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~ 88 (303)
+..|.. .+..++|+ + ++.|+.++.+..+. +|+...... . .+.+|...+..++
T Consensus 332 ~~~~~~~~~~~~~~s-d-g~~l~~~s~~~~l~~~~d~~~~~~------~------------------~l~~~~~~~~~~~ 385 (1045)
T 1k32_A 332 VPEPLRIRYVRRGGD-T-KVAFIHGTREGDFLGIYDYRTGKA------E------------------KFEENLGNVFAMG 385 (1045)
T ss_dssp CSCCSCEEEEEECSS-S-EEEEEEEETTEEEEEEEETTTCCE------E------------------ECCCCCCSEEEEE
T ss_pred ccCCCcceEEeeeEc-C-CCeEEEEECCCceEEEEECCCCCc------e------------------EecCCccceeeeE
Confidence 455666 78899999 5 46788888887787 888753211 0 1224667889999
Q ss_pred EeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCC----------CcEEEEECCC
Q 048118 89 FSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWD----------RTVKVWNLSN 158 (303)
Q Consensus 89 ~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d----------g~i~iwd~~~ 158 (303)
|+|+|++|++++.++.|++||+.+.....+. ..+...+.+++|+|++ ..+++++.+ +.|++||+.+
T Consensus 386 ~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~--~~~~~~v~~~~~SpDG--~~la~~~~~~~~~~~~~~~~~i~l~d~~~ 461 (1045)
T 1k32_A 386 VDRNGKFAVVANDRFEIMTVDLETGKPTVIE--RSREAMITDFTISDNS--RFIAYGFPLKHGETDGYVMQAIHVYDMEG 461 (1045)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTCCEEEEE--ECSSSCCCCEEECTTS--CEEEEEEEECSSTTCSCCEEEEEEEETTT
T ss_pred ECCCCCEEEEECCCCeEEEEECCCCceEEec--cCCCCCccceEECCCC--CeEEEEecCccccccCCCCCeEEEEECCC
Confidence 9999999999999999999998654333222 2356667889999987 356666554 4899999988
Q ss_pred ceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCce-----------------------------------
Q 048118 159 CKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKR----------------------------------- 203 (303)
Q Consensus 159 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~----------------------------------- 203 (303)
++ ...+..|...+..++|+|+|+.|++++.++...+|+......
T Consensus 462 g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (1045)
T 1k32_A 462 RK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEY 540 (1045)
T ss_dssp TE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCC
T ss_pred Cc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccccCceeEEEEeCCCCCCccccCcCccccccccc
Confidence 77 566777888889999999999999999887777776432211
Q ss_pred --------EEEec-CCCeEEEEEEcCCCeEEEE------------E--cCCcEEEEeCCCCceeeeeeeccccccccccC
Q 048118 204 --------LYSLD-AGAVIHALCFSPNRYWLCA------------A--TEQSIKIWDLESKSIVEDLKVDLKTEAEKSEA 260 (303)
Q Consensus 204 --------~~~~~-~~~~v~~~~~s~~~~~l~~------------~--~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 260 (303)
+..+. ....+..++++|++.+++. + ....|++||+++++... +.
T Consensus 541 d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~------------ 607 (1045)
T 1k32_A 541 DLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTE-VK------------ 607 (1045)
T ss_dssp CCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEEE-EE------------
T ss_pred cccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECCCCcEEE-ee------------
Confidence 11111 1245788999999976664 1 24478999998776421 11
Q ss_pred ccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEecc
Q 048118 261 TTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~ 301 (303)
..+.+++|||||++|++++.| .+++||+.
T Consensus 608 -----------~~v~~~~~S~DG~~l~~~~~~-~i~~~d~~ 636 (1045)
T 1k32_A 608 -----------NNLTDLRLSADRKTVMVRKDD-GKIYTFPL 636 (1045)
T ss_dssp -----------EEEEEEEECTTSCEEEEEETT-SCEEEEES
T ss_pred -----------cCcceEEECCCCCEEEEEcCC-cEEEEeCc
Confidence 124568899999999999877 89999985
No 154
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.80 E-value=7.6e-17 Score=136.01 Aligned_cols=207 Identities=16% Similarity=0.199 Sum_probs=131.7
Q ss_pred ccCCEEEEEEeeCCCEEEEEeC---CCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEe-CCCcEEEEE
Q 048118 80 HTKDVLSVAFSIDNRQIVSASR---DRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSAS-WDRTVKVWN 155 (303)
Q Consensus 80 h~~~i~~i~~~~~~~~l~t~~~---d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~dg~i~iwd 155 (303)
+...+..++|+|+|+ +++++. ++.|.+|++.......+.....+...+..++|+|++ ..+++++ .++.|.+|+
T Consensus 38 ~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg--~~l~~~~~~~~~v~v~~ 114 (347)
T 3hfq_A 38 ATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEAR--QLVYSANYHKGTAEVMK 114 (347)
T ss_dssp ECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTT--TEEEEEETTTTEEEEEE
T ss_pred ccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCC--CEEEEEeCCCCEEEEEE
Confidence 345566799999999 555544 689999998543322222111233456789999987 3456555 789999999
Q ss_pred CCC-ce--eEEEEcC---------CCCCeeEEEECCCCCEEEEEeCCCeEEEEeCC-CCceE--E--EecCCCeEEEEEE
Q 048118 156 LSN-CK--LRATLAG---------HTGYVNTVAVSPDGSLCASGGKDGVILLWDLA-EGKRL--Y--SLDAGAVIHALCF 218 (303)
Q Consensus 156 ~~~-~~--~~~~~~~---------~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~-~~~~~--~--~~~~~~~v~~~~~ 218 (303)
+.. +. ....+.. +...+.+++|+|+|+++++...++.|.+|++. +++.. . ..........++|
T Consensus 115 ~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~ 194 (347)
T 3hfq_A 115 IAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVF 194 (347)
T ss_dssp ECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEE
T ss_pred eCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEE
Confidence 952 22 2233321 11247889999999966666678999999998 44322 1 1223446778999
Q ss_pred cCCCeEEEEE--cCCcEEEEeCCC--CceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEE-EEeecCC
Q 048118 219 SPNRYWLCAA--TEQSIKIWDLES--KSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTL-FSGYTDG 293 (303)
Q Consensus 219 s~~~~~l~~~--~~~~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l-~~gs~Dg 293 (303)
+|++.+++++ .++.|.+|+++. +++............ ......+..++|+|+|++| +++..++
T Consensus 195 spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~------------~~~~~~~~~i~~spdG~~l~v~~~~~~ 262 (347)
T 3hfq_A 195 SPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPAD------------YTAHNGAAAIRLSHDGHFLYVSNRGYN 262 (347)
T ss_dssp CTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTT------------CCSCCEEEEEEECTTSCEEEEEEETTT
T ss_pred CCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCC------------CCCCCcceeEEECCCCCEEEEEeCCCC
Confidence 9999755443 467899999864 433211111000000 0011345779999999977 4556699
Q ss_pred eEEEEecc
Q 048118 294 VIRVWGIG 301 (303)
Q Consensus 294 ~v~~w~~~ 301 (303)
.|.+|++.
T Consensus 263 ~v~v~~~~ 270 (347)
T 3hfq_A 263 TLAVFAVT 270 (347)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEC
Confidence 99999975
No 155
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.77 E-value=7.4e-17 Score=137.27 Aligned_cols=243 Identities=10% Similarity=0.052 Sum_probs=152.1
Q ss_pred cceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEeeCCCE
Q 048118 16 DMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSIDNRQ 95 (303)
Q Consensus 16 ~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~~~~~ 95 (303)
..+..++++|++ ++|++++.+ .|.+|++....+. ..... . ..+ +.+..++|+|+|++
T Consensus 40 ~~~~~~a~spdg-~~l~~~~~~-~v~~~~~~~~g~~----~~~~~----------~------~~~-g~~~~~~~spdg~~ 96 (365)
T 1jof_A 40 EPISWMTFDHER-KNIYGAAMK-KWSSFAVKSPTEI----VHEAS----------H------PIG-GHPRANDADTNTRA 96 (365)
T ss_dssp CCCSEEEECTTS-SEEEEEEBT-EEEEEEEEETTEE----EEEEE----------E------ECC-SSGGGGCTTSCCEE
T ss_pred CCCcEEEECCCC-CEEEEEccc-eEEEEEECCCCCE----EEeeE----------e------ecC-CCCccEEECCCCCE
Confidence 357788999875 578888887 9999998621111 00000 0 000 11334778899884
Q ss_pred --EEEEe-------------CCCcEEEEecCC--ceeeeeecC-CCCccceEEEEEcCCCCCCEEEEEe-CCCcEEEEEC
Q 048118 96 --IVSAS-------------RDRTIKLWNTLG--ECKYTIQEG-DAHTEWVSCVRFSPNTLQPTIVSAS-WDRTVKVWNL 156 (303)
Q Consensus 96 --l~t~~-------------~d~~i~vw~~~~--~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~-~dg~i~iwd~ 156 (303)
++++. .++.+.+|++.. .....+... ..+...+.+++|+|++. .++++. .++.|++||+
T Consensus 97 l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~--~l~~~~~~~~~v~~~~~ 174 (365)
T 1jof_A 97 IFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTET--YLYSADLTANKLWTHRK 174 (365)
T ss_dssp EEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSS--EEEEEETTTTEEEEEEE
T ss_pred EEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCC--EEEEEcCCCCEEEEEEE
Confidence 44543 689999999853 221112110 11234578999999873 455544 4689999999
Q ss_pred C-CceeE--EEEc--CCCCCeeEEEECCCCCEEEEEeC-CCeEEEEeCC--CCceE---E---EecCC----C-------
Q 048118 157 S-NCKLR--ATLA--GHTGYVNTVAVSPDGSLCASGGK-DGVILLWDLA--EGKRL---Y---SLDAG----A------- 211 (303)
Q Consensus 157 ~-~~~~~--~~~~--~~~~~i~~~~~~~~~~~l~~~~~-d~~v~iwd~~--~~~~~---~---~~~~~----~------- 211 (303)
. +++.. ..+. .|...+..++|+|+|+++++++. +++|.+|++. +++.. . .+... .
T Consensus 175 ~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~ 254 (365)
T 1jof_A 175 LASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGL 254 (365)
T ss_dssp CTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBS
T ss_pred CCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCccccccccc
Confidence 8 66543 2333 23456889999999999887765 7899999765 45432 1 12211 2
Q ss_pred eEEEEE-EcCCCeEEEEEc--CC-----cEEEEeCC-CCceeeeee-eccccccccccCccceeeccccceeEEEEEEcC
Q 048118 212 VIHALC-FSPNRYWLCAAT--EQ-----SIKIWDLE-SKSIVEDLK-VDLKTEAEKSEATTATTTIKKKNIYCTSLNWSV 281 (303)
Q Consensus 212 ~v~~~~-~s~~~~~l~~~~--~~-----~i~iwd~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp 281 (303)
.+..++ |+|++.+|+++. .+ .|.+|+++ ++++..... .. ........++|+|
T Consensus 255 ~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~------------------~~~~~~~~~a~sp 316 (365)
T 1jof_A 255 YRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSP------------------TPTSGGHSNAVSP 316 (365)
T ss_dssp EEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEE------------------CSSCCTTCCCEEE
T ss_pred ccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeee------------------cCCCCcccceecC
Confidence 588899 999997665443 23 79999986 454332111 00 0000113477899
Q ss_pred ---CCCEEEEeecC-CeEEEEecc
Q 048118 282 ---DGSTLFSGYTD-GVIRVWGIG 301 (303)
Q Consensus 282 ---~~~~l~~gs~D-g~v~~w~~~ 301 (303)
+|++|++++.+ +.|.+|+++
T Consensus 317 ~~~dg~~l~v~~~~~~~v~v~~~~ 340 (365)
T 1jof_A 317 CPWSDEWMAITDDQEGWLEIYRWK 340 (365)
T ss_dssp CTTCTTEEEEECSSSCEEEEEEEE
T ss_pred CCcCCCEEEEEEcCCCeEEEEEEc
Confidence 89999998875 999999874
No 156
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.77 E-value=3.6e-15 Score=122.30 Aligned_cols=248 Identities=15% Similarity=0.201 Sum_probs=167.0
Q ss_pred cccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEE
Q 048118 10 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAF 89 (303)
Q Consensus 10 ~~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~ 89 (303)
.-.+|-..+.++++++++ +++++.+.++.|.+|+... .. ...+. ..+.-.+|...+..+++
T Consensus 24 ~~~g~~~~p~~v~~~~~g-~l~v~~~~~~~i~~~d~~g-~~-----~~~~~------------~~~~~~~~~~~p~~i~~ 84 (286)
T 1q7f_A 24 VMEGQFTEPSGVAVNAQN-DIIVADTNNHRIQIFDKEG-RF-----KFQFG------------ECGKRDSQLLYPNRVAV 84 (286)
T ss_dssp SSTTCBSCEEEEEECTTC-CEEEEEGGGTEEEEECTTS-CE-----EEEEC------------CBSSSTTCBSSEEEEEE
T ss_pred CCCCccCCCceEEECCCC-CEEEEECCCCEEEEECCCC-cE-----EEEec------------ccCCCcccccCceEEEE
Confidence 345566778899999875 6888888899999998642 11 11110 00111234456888999
Q ss_pred e-eCCCEEEEEeC-CCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEEEc-
Q 048118 90 S-IDNRQIVSASR-DRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLA- 166 (303)
Q Consensus 90 ~-~~~~~l~t~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~- 166 (303)
. +++.++++... ++.|.+|+..+.....+. ..+...+.+++++|++ ..+++...++.|.+||.. ++....+.
T Consensus 85 ~~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~--~~~~~~~~~i~~~~~g--~l~v~~~~~~~i~~~~~~-g~~~~~~~~ 159 (286)
T 1q7f_A 85 VRNSGDIIVTERSPTHQIQIYNQYGQFVRKFG--ATILQHPRGVTVDNKG--RIIVVECKVMRVIIFDQN-GNVLHKFGC 159 (286)
T ss_dssp ETTTTEEEEEECGGGCEEEEECTTSCEEEEEC--TTTCSCEEEEEECTTS--CEEEEETTTTEEEEECTT-SCEEEEEEC
T ss_pred EcCCCeEEEEcCCCCCEEEEECCCCcEEEEec--CccCCCceEEEEeCCC--CEEEEECCCCEEEEEcCC-CCEEEEeCC
Confidence 5 66766666543 789999996554332221 1233457889999976 356666678899999964 44444443
Q ss_pred -CCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEecCC---CeEEEEEEcCCCeEEEEEc-CC-cEEEEeCCC
Q 048118 167 -GHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAG---AVIHALCFSPNRYWLCAAT-EQ-SIKIWDLES 240 (303)
Q Consensus 167 -~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~---~~v~~~~~s~~~~~l~~~~-~~-~i~iwd~~~ 240 (303)
.+...+..++++|+++++++.+.++.|++||.. ++.+..+... ..+..+++++++.++++.. ++ .|.+||..
T Consensus 160 ~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~- 237 (286)
T 1q7f_A 160 SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD- 237 (286)
T ss_dssp TTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-
T ss_pred CCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC-
Confidence 344568999999999988887889999999974 5555555432 4678999999987766654 44 89999964
Q ss_pred CceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEeccc
Q 048118 241 KSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIGR 302 (303)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~~ 302 (303)
++.+..+... .....+.+++++|+|.++++ +.|++|++|++..
T Consensus 238 g~~~~~~~~~------------------~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 238 GQLISALESK------------------VKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp SCEEEEEEES------------------SCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSC
T ss_pred CCEEEEEccc------------------CCCCcceeEEECCCCcEEEE-CCCCeEEEEEccc
Confidence 4444433221 01113467899999986666 6799999998753
No 157
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.77 E-value=2.2e-16 Score=132.02 Aligned_cols=206 Identities=12% Similarity=0.141 Sum_probs=144.7
Q ss_pred ceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEeeCCCEE
Q 048118 17 MVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSIDNRQI 96 (303)
Q Consensus 17 ~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~~~~~l 96 (303)
.+..++++|++..++++++.++.|.+||+...+.. ..+. ....+ .|...+..++|+|+++++
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~-----~~~~----------~~~~~---~~~~~~~~~~~s~dg~~l 96 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETL-----GRID----------LSTPE---ERVKSLFGAALSPDGKTL 96 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEE-----EEEE----------CCBTT---EEEECTTCEEECTTSSEE
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeE-----eeEE----------cCCcc---cccccccceEECCCCCEE
Confidence 47889999987666788888999999998654321 1110 00000 012245678999999988
Q ss_pred EEEe------------CCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEE
Q 048118 97 VSAS------------RDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRAT 164 (303)
Q Consensus 97 ~t~~------------~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~ 164 (303)
++++ .++.|.+||............ ...+.+++|+|++. .++++ ++.|.+||+.+++....
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~---~~~~~~~~~s~dg~--~l~~~--~~~i~~~d~~~~~~~~~ 169 (337)
T 1pby_B 97 AIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA---PRQITMLAWARDGS--KLYGL--GRDLHVMDPEAGTLVED 169 (337)
T ss_dssp EEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC---CSSCCCEEECTTSS--CEEEE--SSSEEEEETTTTEEEEE
T ss_pred EEEecccccccccccccCceEEEEECCCCcEEEEEeC---CCCcceeEECCCCC--EEEEe--CCeEEEEECCCCcEeee
Confidence 8886 579999999865432222111 22356788999863 34444 68899999887765544
Q ss_pred EcCCC------------------------------------------------------------------CCeeEEEEC
Q 048118 165 LAGHT------------------------------------------------------------------GYVNTVAVS 178 (303)
Q Consensus 165 ~~~~~------------------------------------------------------------------~~i~~~~~~ 178 (303)
+..+. ..+..++|+
T Consensus 170 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s 249 (337)
T 1pby_B 170 KPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVN 249 (337)
T ss_dssp ECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEEC
T ss_pred eeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEEC
Confidence 33211 124468999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceEEEecCCCeEEEEEEcCCCeEE-EEEcCCcEEEEeCCCCceeeeeee
Q 048118 179 PDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWL-CAATEQSIKIWDLESKSIVEDLKV 249 (303)
Q Consensus 179 ~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~~~i~iwd~~~~~~~~~~~~ 249 (303)
|++++++++ ++.|.+||+.+++.+..+.....+.+++|+|++..+ +++.++.|.+||+++++.+..++.
T Consensus 250 ~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~ 319 (337)
T 1pby_B 250 PAKTRAFGA--YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDL 319 (337)
T ss_dssp TTSSEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEEC
T ss_pred CCCCEEEEe--CCeEEEEECCCCcCcceecCCCceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEc
Confidence 999998888 799999999999888777766678899999998655 445678999999999988876654
No 158
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.76 E-value=7.4e-16 Score=130.68 Aligned_cols=204 Identities=10% Similarity=0.118 Sum_probs=129.0
Q ss_pred ccCCEEEEEEeeCCCEEEEEeCC----CcEEEEecCCc--eeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEE
Q 048118 80 HTKDVLSVAFSIDNRQIVSASRD----RTIKLWNTLGE--CKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKV 153 (303)
Q Consensus 80 h~~~i~~i~~~~~~~~l~t~~~d----~~i~vw~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~i 153 (303)
+...+..++|+|++++|++++.+ +.|.+|++... ....+.....+......+++ ++ ...+++...++.|.+
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg-~~l~~~~~~~~~v~~ 124 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NG-KNIVTANYSGGSITV 124 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CS-SEEEEEETTTTEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CC-CEEEEEECCCCEEEE
Confidence 34556679999999999998886 79999987432 22122111112334556666 33 223444446889999
Q ss_pred EECCCceeE----EE--EcC--------CCCCeeEEEECCCCCEEEEEe-CCCeEEEEeCCCCce--------------E
Q 048118 154 WNLSNCKLR----AT--LAG--------HTGYVNTVAVSPDGSLCASGG-KDGVILLWDLAEGKR--------------L 204 (303)
Q Consensus 154 wd~~~~~~~----~~--~~~--------~~~~i~~~~~~~~~~~l~~~~-~d~~v~iwd~~~~~~--------------~ 204 (303)
|++...... .. ..+ +...+.+++|+|+|+++++++ .++.|.+|++..... .
T Consensus 125 ~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~ 204 (361)
T 3scy_A 125 FPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEA 204 (361)
T ss_dssp EEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEE
T ss_pred EEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccc
Confidence 998643211 11 111 122357899999999776555 588999998864331 2
Q ss_pred EEecCCCeEEEEEEcCCCeEEEEE--cCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCC
Q 048118 205 YSLDAGAVIHALCFSPNRYWLCAA--TEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVD 282 (303)
Q Consensus 205 ~~~~~~~~v~~~~~s~~~~~l~~~--~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~ 282 (303)
...........++|+|++.+++++ .++.|.+||++++++........ ...+......++|+||
T Consensus 205 ~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~---------------~~~~~~~~~~i~~spd 269 (361)
T 3scy_A 205 FKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAA---------------DTVNAQGSGDIHLSPD 269 (361)
T ss_dssp EECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEES---------------CSSCCCCEEEEEECTT
T ss_pred eecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEec---------------CCCCCCCcccEEECCC
Confidence 233445667889999999765444 37899999998665422111110 0111122367899999
Q ss_pred CCEEEEeec--CCeEEEEecc
Q 048118 283 GSTLFSGYT--DGVIRVWGIG 301 (303)
Q Consensus 283 ~~~l~~gs~--Dg~v~~w~~~ 301 (303)
|++|++++. ++.|.+|++.
T Consensus 270 g~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 270 GKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp SSEEEEEECSSSCEEEEEEEC
T ss_pred CCEEEEECCCCCCEEEEEEEc
Confidence 998876665 4899999984
No 159
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.76 E-value=3.1e-17 Score=151.65 Aligned_cols=194 Identities=11% Similarity=0.081 Sum_probs=130.9
Q ss_pred eeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccC---CEEEEEEeeCCCE
Q 048118 19 TAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTK---DVLSVAFSIDNRQ 95 (303)
Q Consensus 19 ~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~---~i~~i~~~~~~~~ 95 (303)
..+.|+|++ .+ +..+.|++|++|+....... ..+ .+|.. .+.+++|+|+|++
T Consensus 19 ~~~~~s~dg-~~-~~~~~d~~i~~~~~~~g~~~-----~~~------------------~~~~~~~~~~~~~~~SpDg~~ 73 (719)
T 1z68_A 19 FFPNWISGQ-EY-LHQSADNNIVLYNIETGQSY-----TIL------------------SNRTMKSVNASNYGLSPDRQF 73 (719)
T ss_dssp CCCEESSSS-EE-EEECTTSCEEEEESSSCCEE-----EEE------------------CHHHHHTTTCSEEEECTTSSE
T ss_pred CccEECCCC-eE-EEEcCCCCEEEEEcCCCcEE-----EEE------------------ccccccccceeeEEECCCCCe
Confidence 367899876 44 44556999999998654321 111 11211 3778999999999
Q ss_pred EEEEeC---------CCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEEE-
Q 048118 96 IVSASR---------DRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATL- 165 (303)
Q Consensus 96 l~t~~~---------d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~- 165 (303)
|++++. ++.|++||+.+........ -...+..++|+|++. .++.+ .++.|++||+.+++.....
T Consensus 74 la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~---l~~~~~~~~~SPDG~--~la~~-~~~~i~~~~~~~g~~~~l~~ 147 (719)
T 1z68_A 74 VYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNE---LPRPIQYLCWSPVGS--KLAYV-YQNNIYLKQRPGDPPFQITF 147 (719)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEETTTTEECCSSC---CCSSBCCEEECSSTT--CEEEE-ETTEEEEESSTTSCCEECCC
T ss_pred EEEEecCceeEEeecceEEEEEECCCCcccccee---cCcccccceECCCCC--EEEEE-ECCeEEEEeCCCCCcEEEec
Confidence 998876 7899999986654310011 123477899999974 45555 4789999999877654322
Q ss_pred cCCCCCe-----------------eEEEECCCCCEEEEEeCCC----------------------------------eEE
Q 048118 166 AGHTGYV-----------------NTVAVSPDGSLCASGGKDG----------------------------------VIL 194 (303)
Q Consensus 166 ~~~~~~i-----------------~~~~~~~~~~~l~~~~~d~----------------------------------~v~ 194 (303)
.++...+ .+++|||||+.|++++.|. .|+
T Consensus 148 ~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~ 227 (719)
T 1z68_A 148 NGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIF 227 (719)
T ss_dssp CCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEE
T ss_pred CCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEE
Confidence 2222222 4899999999999987652 788
Q ss_pred EEeCCCCceE--EEe-------cCCCeEEEEEEcCCCeEEEEEcC-----CcEEEEe----CCCCce
Q 048118 195 LWDLAEGKRL--YSL-------DAGAVIHALCFSPNRYWLCAATE-----QSIKIWD----LESKSI 243 (303)
Q Consensus 195 iwd~~~~~~~--~~~-------~~~~~v~~~~~s~~~~~l~~~~~-----~~i~iwd----~~~~~~ 243 (303)
+||+.+++.. ..+ .....+..++|+||+.+++...+ ..|++|| .++++.
T Consensus 228 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~ 294 (719)
T 1z68_A 228 IIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDC 294 (719)
T ss_dssp EEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEEC
T ss_pred EEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCce
Confidence 9999887642 111 13456889999999887765432 2489999 766654
No 160
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.76 E-value=7.9e-15 Score=122.94 Aligned_cols=242 Identities=13% Similarity=0.154 Sum_probs=166.6
Q ss_pred cceeeeecCCCCCcEEEEecCCC------------------------cEEEEEcccCccccceeeeeecCCCcceEEEEe
Q 048118 16 DMVTAIATPIDNSDMIVTASRDK------------------------SIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVL 71 (303)
Q Consensus 16 ~~v~~v~~~~~~~~~~~t~s~d~------------------------~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 71 (303)
..+.+|+++|++ +++++.+.++ +|.+||...... ....
T Consensus 24 ~~v~~va~d~~G-~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~-----~~~~------------ 85 (329)
T 3fvz_A 24 GQVSGVALDSKN-NLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEI-----LQSS------------ 85 (329)
T ss_dssp SCEEEEEECTTC-CEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCE-----EEEE------------
T ss_pred CCceEEEECCCC-CEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeE-----Eecc------------
Confidence 468899999875 6888887774 466665432211 0000
Q ss_pred CCCCceecccCCEEEEEEeeCCCEEEEEeCCCcEEEEecCCc--eeeeeec------CCCCccceEEEEEcC-CCCCCEE
Q 048118 72 SSDGQFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGE--CKYTIQE------GDAHTEWVSCVRFSP-NTLQPTI 142 (303)
Q Consensus 72 ~~~~~~~~h~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~--~~~~~~~------~~~~~~~i~~~~~~~-~~~~~~~ 142 (303)
-.++-..+..++++++|.++++...++.|++|+..+. ....+.. ...+......++++| ++ ..+
T Consensus 86 -----~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g--~ly 158 (329)
T 3fvz_A 86 -----GKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTG--AVF 158 (329)
T ss_dssp -----CTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTC--CEE
T ss_pred -----CCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCC--eEE
Confidence 0123346889999999998888888999999998654 2222210 012334578999999 44 355
Q ss_pred EEEe-CCCcEEEEECCCceeEEEEcC----------CCCCeeEEEECCC-CCEEEEEeCCCeEEEEeCCCCceEEEec--
Q 048118 143 VSAS-WDRTVKVWNLSNCKLRATLAG----------HTGYVNTVAVSPD-GSLCASGGKDGVILLWDLAEGKRLYSLD-- 208 (303)
Q Consensus 143 ~~~~-~dg~i~iwd~~~~~~~~~~~~----------~~~~i~~~~~~~~-~~~l~~~~~d~~v~iwd~~~~~~~~~~~-- 208 (303)
++.+ .++.|++||. +++....+.. +......++++|+ ++++++...+++|++||..+++.+..+.
T Consensus 159 v~d~~~~~~I~~~~~-~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~ 237 (329)
T 3fvz_A 159 VSDGYCNSRIVQFSP-SGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHA 237 (329)
T ss_dssp EEECSSCCEEEEECT-TSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCT
T ss_pred EEeCCCCCeEEEEcC-CCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEecc
Confidence 6655 5899999994 5665555532 2234789999998 6777777789999999998888887763
Q ss_pred -CCCeEEEEEEcCCCeEEEEE--------cCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEE
Q 048118 209 -AGAVIHALCFSPNRYWLCAA--------TEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNW 279 (303)
Q Consensus 209 -~~~~v~~~~~s~~~~~l~~~--------~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (303)
....+..++|+| +..+... .+..|++||..+++++..+... ..+...+..+++
T Consensus 238 ~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~-----------------~~~~~~p~~ia~ 299 (329)
T 3fvz_A 238 SFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPV-----------------RKHFDMPHDIVA 299 (329)
T ss_dssp TTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCS-----------------SSCCSSEEEEEE
T ss_pred ccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCC-----------------CCccCCeeEEEE
Confidence 245688999999 5444332 2347999999988876544210 112234578999
Q ss_pred cCCCCEEEEeecCCeEEEEecc
Q 048118 280 SVDGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 280 sp~~~~l~~gs~Dg~v~~w~~~ 301 (303)
+|+|.++++...+++|++|++.
T Consensus 300 ~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 300 SEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp CTTSEEEEEESSSCCEEEEEEE
T ss_pred CCCCCEEEEECCCCEEEEEeCC
Confidence 9999888888999999999874
No 161
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.74 E-value=3.1e-16 Score=131.91 Aligned_cols=208 Identities=14% Similarity=0.106 Sum_probs=141.9
Q ss_pred ceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEeeCCCEE
Q 048118 17 MVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSIDNRQI 96 (303)
Q Consensus 17 ~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~~~~~l 96 (303)
.+..++++|++..++++++.++.|.+||+...+.. ..+. ...... .+...+..++|+|+|+++
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~-----~~~~----------~~~~~~--~~~~~~~~~~~spdg~~l 106 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNT-----FHAN----------LSSVPG--EVGRSMYSFAISPDGKEV 106 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEE-----EEEE----------SCCSTT--EEEECSSCEEECTTSSEE
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEE-----EEEE----------cccccc--cccccccceEECCCCCEE
Confidence 46788899887556677778999999998643221 1110 000000 001235678999999999
Q ss_pred EEEeCC------------CcEEEEecCCceee-eeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEE
Q 048118 97 VSASRD------------RTIKLWNTLGECKY-TIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRA 163 (303)
Q Consensus 97 ~t~~~d------------~~i~vw~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~ 163 (303)
++++.+ +.|.+||+...... ...... +...+.+++|+|++. ++.++ +.|.+||..+++...
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~---l~~~~--~~i~~~d~~~~~~~~ 180 (349)
T 1jmx_B 107 YATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS---LYVAG--PDIYKMDVKTGKYTV 180 (349)
T ss_dssp EEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC---EEEES--SSEEEECTTTCCEEE
T ss_pred EEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc---EEEcc--CcEEEEeCCCCceec
Confidence 988865 89999997542111 111111 222477889999873 33343 349999998877665
Q ss_pred EEcCCC--------------------------------------------------------------------CCeeEE
Q 048118 164 TLAGHT--------------------------------------------------------------------GYVNTV 175 (303)
Q Consensus 164 ~~~~~~--------------------------------------------------------------------~~i~~~ 175 (303)
.+..+. ..+..+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (349)
T 1jmx_B 181 ALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTG 260 (349)
T ss_dssp EECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEE
T ss_pred cccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceee
Confidence 554321 134567
Q ss_pred EECC-CCCEEEEEeCCCeEEEEeCCCCceEEEecCCCeEEEEEEcCCCe-EEEEEcCCcEEEEeCCCCceeeeeee
Q 048118 176 AVSP-DGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRY-WLCAATEQSIKIWDLESKSIVEDLKV 249 (303)
Q Consensus 176 ~~~~-~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~~~i~iwd~~~~~~~~~~~~ 249 (303)
+++| ++++++++ ++.|.+||+.+++.+..+.....+..++|+|++. +++++.++.|.+||+++++.+..++.
T Consensus 261 ~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~ 334 (349)
T 1jmx_B 261 LRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKL 334 (349)
T ss_dssp EECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEEC
T ss_pred EecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCCCccceEECCCCCEEEEecCCCeEEEEeccccceeeeeec
Confidence 7889 99998888 8899999999998887776666677899999975 44455678999999999988776654
No 162
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.73 E-value=1.1e-15 Score=138.00 Aligned_cols=228 Identities=12% Similarity=0.061 Sum_probs=150.6
Q ss_pred cccc-cceeeeecCCCCCcEEEEecC---CCcEEEEEccc--CccccceeeeeecCCCcceEEEEeCCCCceecccCCEE
Q 048118 12 RAHT-DMVTAIATPIDNSDMIVTASR---DKSIIVWHLTK--EEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVL 85 (303)
Q Consensus 12 ~~h~-~~v~~v~~~~~~~~~~~t~s~---d~~i~iw~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~ 85 (303)
..|. ..+..++|+|+ .++++++. +...++|.+.. ..... .+. ....+.
T Consensus 60 t~~~~~~~~~~~~spd--~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-----~l~-------------------~~~~~~ 113 (582)
T 3o4h_A 60 NREPINSVLDPHYGVG--RVILVRDVSKGAEQHALFKVNTSRPGEEQ-----RLE-------------------AVKPMR 113 (582)
T ss_dssp CSSCCSEECEECTTCS--EEEEEEECSTTSCCEEEEEEETTSTTCCE-----ECT-------------------TSCSBE
T ss_pred ecccccccccccCCCC--eEEEEeccCCCCcceEEEEEeccCCCccc-----ccc-------------------CCCCce
Confidence 3444 57899999986 57777765 56678877653 22110 000 011223
Q ss_pred EEEEeeCCCE-EEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCC----CcEEEEECCCce
Q 048118 86 SVAFSIDNRQ-IVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWD----RTVKVWNLSNCK 160 (303)
Q Consensus 86 ~i~~~~~~~~-l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d----g~i~iwd~~~~~ 160 (303)
..+|+|+++. +++.+.++.+.+||+.+.....+... .. .+++|+|++ ..+++++.+ +.|++||+.+++
T Consensus 114 ~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~---~~--~~~~~spDG--~~la~~~~~~~~~~~i~~~d~~~g~ 186 (582)
T 3o4h_A 114 ILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARL---PG--FGFVSDIRG--DLIAGLGFFGGGRVSLFTSNLSSGG 186 (582)
T ss_dssp EEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEE---SS--CEEEEEEET--TEEEEEEEEETTEEEEEEEETTTCC
T ss_pred eeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecC---CC--ceEEECCCC--CEEEEEEEcCCCCeEEEEEcCCCCC
Confidence 5578888753 33334444556999865433333221 11 678899987 367766665 779999998877
Q ss_pred eEEEEcCCCCCeeEEEECCCCCEEEEEeCCC--eEEEEeCCCCceEEEec-CCCeEEEEE--------EcCCCeEEEE-E
Q 048118 161 LRATLAGHTGYVNTVAVSPDGSLCASGGKDG--VILLWDLAEGKRLYSLD-AGAVIHALC--------FSPNRYWLCA-A 228 (303)
Q Consensus 161 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~--~v~iwd~~~~~~~~~~~-~~~~v~~~~--------~s~~~~~l~~-~ 228 (303)
.. .+..|...+..++|+|||+.|+++..++ +|++||+.+++.. .+. ....+..++ |+|++.++++ .
T Consensus 187 ~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~ 264 (582)
T 3o4h_A 187 LR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVAR 264 (582)
T ss_dssp CE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEE
T ss_pred ce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEE
Confidence 65 5677888899999999999999888888 9999999988766 332 222333344 9999965554 4
Q ss_pred cCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCe---EEEEec
Q 048118 229 TEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGV---IRVWGI 300 (303)
Q Consensus 229 ~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~---v~~w~~ 300 (303)
.++.+++|++ ++..... ...+.+++|+ +++++++++.+.. +.+|+.
T Consensus 265 ~~g~~~l~~~--g~~~~~~-----------------------~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~ 313 (582)
T 3o4h_A 265 REGRSAVFID--GERVEAP-----------------------QGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPS 313 (582)
T ss_dssp ETTEEEEEET--TEEECCC-----------------------SSEEEEEEEE-TTEEEEEEEETTEEEEEEEETT
T ss_pred cCCcEEEEEE--CCeeccC-----------------------CCceEEEEec-CCEEEEEEcCCCCCCeEEEEcC
Confidence 6899999999 4432200 0134578899 9999998888854 566654
No 163
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.71 E-value=1.7e-15 Score=140.57 Aligned_cols=199 Identities=11% Similarity=0.119 Sum_probs=131.9
Q ss_pred ceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEeeCCCEE
Q 048118 17 MVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSIDNRQI 96 (303)
Q Consensus 17 ~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~~~~~l 96 (303)
....+.|+|++ .+++++ |++|++|++..+.. ...+.++.. ..+......++|+|+|+++
T Consensus 18 ~~~~~~w~~dg-~~~~~~--~~~i~~~~~~~~~~-----~~~~~~~~~-------------~~~~~~~~~~~~Spdg~~l 76 (740)
T 4a5s_A 18 KLYSLRWISDH-EYLYKQ--ENNILVFNAEYGNS-----SVFLENSTF-------------DEFGHSINDYSISPDGQFI 76 (740)
T ss_dssp CCCCEEECSSS-EEEEEE--TTEEEEEETTTCCE-----EEEECTTTT-------------TTCCSCCCEEEECTTSSEE
T ss_pred cccccEECCCC-cEEEEc--CCcEEEEECCCCce-----EEEEechhh-------------hhhcccccceEECCCCCEE
Confidence 35688999875 677775 99999999875432 111222211 1122233457899999999
Q ss_pred EEEeCC---------CcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEE-Ec
Q 048118 97 VSASRD---------RTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRAT-LA 166 (303)
Q Consensus 97 ~t~~~d---------~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~-~~ 166 (303)
+.++.+ +.+.+||+.+.....+ ..+...+...+|+|++. .++.+ .++.|++|++.+++.... ..
T Consensus 77 ~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l---~~~~~~~~~~~~SPdG~--~la~~-~~~~i~~~~~~~~~~~~lt~~ 150 (740)
T 4a5s_A 77 LLEYNYVKQWRHSYTASYDIYDLNKRQLITE---ERIPNNTQWVTWSPVGH--KLAYV-WNNDIYVKIEPNLPSYRITWT 150 (740)
T ss_dssp EEEEEEEECSSSCEEEEEEEEETTTTEECCS---SCCCTTEEEEEECSSTT--CEEEE-ETTEEEEESSTTSCCEECCSC
T ss_pred EEEECCeeeEEEccceEEEEEECCCCcEEEc---ccCCCcceeeEECCCCC--EEEEE-ECCeEEEEECCCCceEEEcCC
Confidence 988876 4556999876543322 23455688999999984 35554 578999999987764431 22
Q ss_pred CCCCCe-----------------eEEEECCCCCEEEEEeCCC------------------------------------eE
Q 048118 167 GHTGYV-----------------NTVAVSPDGSLCASGGKDG------------------------------------VI 193 (303)
Q Consensus 167 ~~~~~i-----------------~~~~~~~~~~~l~~~~~d~------------------------------------~v 193 (303)
++...+ ..+.|||||+.|+.++.|. +|
T Consensus 151 g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l 230 (740)
T 4a5s_A 151 GKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKF 230 (740)
T ss_dssp CBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEE
T ss_pred CCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEE
Confidence 222222 3589999999998875322 58
Q ss_pred EEEeCCC---Cc--eEEEec-------CCCeEEEEEEcCCCeEEEEEc-----CCcEEEEeCCCCc
Q 048118 194 LLWDLAE---GK--RLYSLD-------AGAVIHALCFSPNRYWLCAAT-----EQSIKIWDLESKS 242 (303)
Q Consensus 194 ~iwd~~~---~~--~~~~~~-------~~~~v~~~~~s~~~~~l~~~~-----~~~i~iwd~~~~~ 242 (303)
++||+.+ ++ ....+. ....+..++|+||+.+++... +..|++||+.+++
T Consensus 231 ~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 231 FVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp EEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred EEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 8899988 63 222332 345688999999998665432 2369999998775
No 164
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.69 E-value=1.5e-14 Score=122.99 Aligned_cols=212 Identities=13% Similarity=0.116 Sum_probs=131.3
Q ss_pred CEEEEEEeeCCCEEEEEeCCCcEEEEecC-CceeeeeecCCCCccceEEEEEcCCCCCCEEEEEe-------------CC
Q 048118 83 DVLSVAFSIDNRQIVSASRDRTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSAS-------------WD 148 (303)
Q Consensus 83 ~i~~i~~~~~~~~l~t~~~d~~i~vw~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-------------~d 148 (303)
.+..++|+|++++|++++.+ .|.+|++. ............. ....+++|+|++...+++++. .+
T Consensus 41 ~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~ 118 (365)
T 1jof_A 41 PISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFA 118 (365)
T ss_dssp CCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSC
T ss_pred CCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC-CCCccEEECCCCCEEEEEEecCCcceeccceeecCC
Confidence 56689999999999988888 89999974 2222111110001 113447788886211234442 68
Q ss_pred CcEEEEECC-CceeEEEEc----CCCCCeeEEEECCCCCEEEEEeC-CCeEEEEeCC-CCceE--EEec---CCCeEEEE
Q 048118 149 RTVKVWNLS-NCKLRATLA----GHTGYVNTVAVSPDGSLCASGGK-DGVILLWDLA-EGKRL--YSLD---AGAVIHAL 216 (303)
Q Consensus 149 g~i~iwd~~-~~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~~-d~~v~iwd~~-~~~~~--~~~~---~~~~v~~~ 216 (303)
+.+.+|++. +++....+. .+...+.+++|+|+|++++++.. ++.|++||+. +++.. ..+. ....+..+
T Consensus 119 g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~ 198 (365)
T 1jof_A 119 GYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWV 198 (365)
T ss_dssp CEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEE
T ss_pred ceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEe
Confidence 999999996 455443333 24567899999999998877654 6899999998 66542 2332 25568899
Q ss_pred EEcCCCeEEEEEc--CCcEEEEeCC--CCceeeee-eeccccccccccCccceeeccccceeEEEEE-EcCCCCEEEEee
Q 048118 217 CFSPNRYWLCAAT--EQSIKIWDLE--SKSIVEDL-KVDLKTEAEKSEATTATTTIKKKNIYCTSLN-WSVDGSTLFSGY 290 (303)
Q Consensus 217 ~~s~~~~~l~~~~--~~~i~iwd~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~sp~~~~l~~gs 290 (303)
+|+|++.+++++. ++.|.+|+++ ++++.... .+...+...... .. ... ....+..++ |+|||++|++++
T Consensus 199 ~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~-~~---~~~-~~~~~~~i~~~spdG~~l~v~~ 273 (365)
T 1jof_A 199 AMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDR-DP---ETG-KGLYRADVCALTFSGKYMFASS 273 (365)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCB-CT---TTS-SBSEEEEEEEECTTSSEEEEEE
T ss_pred EECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCc-cc---ccc-cccccccEEEECCCCCEEEEEC
Confidence 9999997665543 5789999765 45432100 010000000000 00 000 011457899 999999888776
Q ss_pred cCC------eEEEEecc
Q 048118 291 TDG------VIRVWGIG 301 (303)
Q Consensus 291 ~Dg------~v~~w~~~ 301 (303)
.+. .|.+|++.
T Consensus 274 ~~~~~~~~~~i~v~~~~ 290 (365)
T 1jof_A 274 RANKFELQGYIAGFKLR 290 (365)
T ss_dssp EESSTTSCCEEEEEEEC
T ss_pred CCCCCCCCCeEEEEEEC
Confidence 433 89999974
No 165
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.69 E-value=3.4e-16 Score=144.67 Aligned_cols=233 Identities=12% Similarity=0.132 Sum_probs=146.1
Q ss_pred eeeeecCCCCCcEEEEecC---------CCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEE
Q 048118 18 VTAIATPIDNSDMIVTASR---------DKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVA 88 (303)
Q Consensus 18 v~~v~~~~~~~~~~~t~s~---------d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~ 88 (303)
+..++|+|++ ++|++++. |++|++||+...+... .. + ....+..++
T Consensus 62 ~~~~~~SpDg-~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~---~~------------------~---l~~~~~~~~ 116 (719)
T 1z68_A 62 ASNYGLSPDR-QFVYLESDYSKLWRYSYTATYYIYDLSNGEFVR---GN------------------E---LPRPIQYLC 116 (719)
T ss_dssp CSEEEECTTS-SEEEEEEEEEECSSSCEEEEEEEEETTTTEECC---SS------------------C---CCSSBCCEE
T ss_pred eeeEEECCCC-CeEEEEecCceeEEeecceEEEEEECCCCcccc---ce------------------e---cCcccccce
Confidence 8899999986 57888776 7899999986542100 00 0 013466799
Q ss_pred EeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccce-----------------EEEEEcCCCCCCEEEEEeCCC--
Q 048118 89 FSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWV-----------------SCVRFSPNTLQPTIVSASWDR-- 149 (303)
Q Consensus 89 ~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i-----------------~~~~~~~~~~~~~~~~~~~dg-- 149 (303)
|+|+|++|+.+. |+.|++|+..+.....+. ...+...+ .+++|+|++ ..|++++.|.
T Consensus 117 ~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~-~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG--~~la~~~~d~~~ 192 (719)
T 1z68_A 117 WSPVGSKLAYVY-QNNIYLKQRPGDPPFQIT-FNGRENKIFNGIPDWVYEEEMLATKYALWWSPNG--KFLAYAEFNDTD 192 (719)
T ss_dssp ECSSTTCEEEEE-TTEEEEESSTTSCCEECC-CCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTS--SEEEEEEEECTT
T ss_pred ECCCCCEEEEEE-CCeEEEEeCCCCCcEEEe-cCCCcCCeEcccccceeeeecccCcccEEECCCC--CEEEEEEECCCC
Confidence 999999999885 789999998543322221 11222212 479999997 3577665442
Q ss_pred --------------------------------cEEEEECCCceeE--EE------EcCCCCCeeEEEECCCCCEEEEEeC
Q 048118 150 --------------------------------TVKVWNLSNCKLR--AT------LAGHTGYVNTVAVSPDGSLCASGGK 189 (303)
Q Consensus 150 --------------------------------~i~iwd~~~~~~~--~~------~~~~~~~i~~~~~~~~~~~l~~~~~ 189 (303)
.|++||+.+++.. .. +.+|...+..++|+||++++++...
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~ 272 (719)
T 1z68_A 193 IPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLK 272 (719)
T ss_dssp SCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEE
T ss_pred CceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEec
Confidence 7889999887642 11 2357778999999999877766443
Q ss_pred C----CeEEEEe----CCCCceEEEe-----cCCCeEE-----EEEEcCCCeEEEE--E-cCC--cEEEEeCCCCceeee
Q 048118 190 D----GVILLWD----LAEGKRLYSL-----DAGAVIH-----ALCFSPNRYWLCA--A-TEQ--SIKIWDLESKSIVED 246 (303)
Q Consensus 190 d----~~v~iwd----~~~~~~~~~~-----~~~~~v~-----~~~~s~~~~~l~~--~-~~~--~i~iwd~~~~~~~~~ 246 (303)
. ..|.+|| +.+++..... .....+. .+.|+|++..++. + .++ .|++||+.+++.. .
T Consensus 273 ~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~~-~ 351 (719)
T 1z68_A 273 RVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAI-Q 351 (719)
T ss_dssp SSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTCE-E
T ss_pred cccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCceE-e
Confidence 2 2588899 7766543322 1223343 6789999864432 3 333 5888887765421 1
Q ss_pred eeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeec-----CCeEEEEecc
Q 048118 247 LKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYT-----DGVIRVWGIG 301 (303)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~-----Dg~v~~w~~~ 301 (303)
+. .+...+..+.++ +++.|+..+. ++..++|.+.
T Consensus 352 lt--------------------~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~ 390 (719)
T 1z68_A 352 IT--------------------SGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRIS 390 (719)
T ss_dssp CS--------------------CSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEE
T ss_pred cc--------------------cCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEe
Confidence 11 111113345555 7776665554 4889999763
No 166
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.68 E-value=1.7e-14 Score=123.21 Aligned_cols=247 Identities=11% Similarity=0.039 Sum_probs=147.0
Q ss_pred ccccccceee-----eecCCCCCcEEEEecC-CCc--EEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccC
Q 048118 11 MRAHTDMVTA-----IATPIDNSDMIVTASR-DKS--IIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTK 82 (303)
Q Consensus 11 ~~~h~~~v~~-----v~~~~~~~~~~~t~s~-d~~--i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~ 82 (303)
+..|...... .+|+|++ ++|+.++. ++. |.+|++...+. .... .++..
T Consensus 26 lt~~~~~~~~~~~~~~~~SpDg-~~l~~~~~~~g~~~l~~~d~~~g~~-----~~lt------------------~~~~~ 81 (388)
T 3pe7_A 26 LTPPDVTCHRNYFYQKCFTRDG-SKLLFGGAFDGPWNYYLLDLNTQVA-----TQLT------------------EGRGD 81 (388)
T ss_dssp CSCTTSCEECCCTTSCCBCTTS-CEEEEEECTTSSCEEEEEETTTCEE-----EECC------------------CSSCB
T ss_pred ecCCcccccchhhcCccCCCCC-CEEEEEEcCCCCceEEEEeCCCCce-----EEee------------------eCCCC
Confidence 4455544554 7899986 46676666 775 66666643221 1111 12233
Q ss_pred CEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEE--EcCCCCCCEEEE----------------
Q 048118 83 DVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVR--FSPNTLQPTIVS---------------- 144 (303)
Q Consensus 83 ~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~---------------- 144 (303)
.+....|+|+++.|+.++.++.|.+||+.+.....+.. .+...+.... ++|++ ..++.
T Consensus 82 ~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~--~~~~~~~~~~~~~~~dg--~~l~~~~~~~~~~~~~~~~~~ 157 (388)
T 3pe7_A 82 NTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQ--VPAEWVGYGTWVANSDC--TKLVGIEIRREDWVPLTDWKK 157 (388)
T ss_dssp CSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE--CCTTEEEEEEEEECTTS--SEEEEEEEEGGGCCCCCSHHH
T ss_pred CccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeee--chhhcccccceeECCCC--CeeccccccCcccccccccch
Confidence 33356799999999999999999999986543332222 1223333333 46765 23432
Q ss_pred ------EeCCCcEEEEECCCceeEEEEcCCCCCeeEEEECC-CCCEEEEEeCC------CeEEEEeCCCCceEEEecCC-
Q 048118 145 ------ASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSP-DGSLCASGGKD------GVILLWDLAEGKRLYSLDAG- 210 (303)
Q Consensus 145 ------~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d------~~v~iwd~~~~~~~~~~~~~- 210 (303)
...+..|.+||+.+++... +..+...+..+.|+| +|+.|+..+.+ ..|.++|+..++........
T Consensus 158 ~~~~~~~~~~~~l~~~d~~~g~~~~-l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~ 236 (388)
T 3pe7_A 158 FHEFYFTKPCCRLMRVDLKTGESTV-ILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAE 236 (388)
T ss_dssp HHHHGGGCCCEEEEEEETTTCCEEE-EEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCT
T ss_pred hhhhhccCCcceEEEEECCCCceEE-eecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCC
Confidence 1234679999998876543 334566789999999 99988877653 37888887665432222222
Q ss_pred -CeEEEEEEcCCCeEEEE-Ec-CC----cEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCC
Q 048118 211 -AVIHALCFSPNRYWLCA-AT-EQ----SIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDG 283 (303)
Q Consensus 211 -~~v~~~~~s~~~~~l~~-~~-~~----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~ 283 (303)
..+...+|+|++..|+. +. ++ .|++||+++++......... .... .. ......|+|||
T Consensus 237 ~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~---------~~~~-~~-----~~~~~~~spdg 301 (388)
T 3pe7_A 237 GESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPA---------CSHL-MS-----NYDGSLMVGDG 301 (388)
T ss_dssp TEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECC---------EEEE-EE-----CTTSSEEEEEE
T ss_pred CcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCC---------ceee-ee-----cCCCCeEccCC
Confidence 35778899999875543 32 12 39999999876432111100 0000 00 00113689999
Q ss_pred CEEEEe---------ecCCeEEEEecc
Q 048118 284 STLFSG---------YTDGVIRVWGIG 301 (303)
Q Consensus 284 ~~l~~g---------s~Dg~v~~w~~~ 301 (303)
+.|+.. ..+..|.+||+.
T Consensus 302 ~~l~~~~~~~~~~~~~~~~~i~~~d~~ 328 (388)
T 3pe7_A 302 SDAPVDVQDDSGYKIENDPFLYVFNMK 328 (388)
T ss_dssp CCC------------CCCCEEEEEETT
T ss_pred CcceeEeeeccccccCCCCEEEEEecc
Confidence 987754 556789999874
No 167
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.65 E-value=2.3e-14 Score=131.19 Aligned_cols=260 Identities=11% Similarity=0.032 Sum_probs=156.8
Q ss_pred cccccccceeeeecCCCCCcEEEEe--cCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEE
Q 048118 10 TMRAHTDMVTAIATPIDNSDMIVTA--SRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSV 87 (303)
Q Consensus 10 ~~~~h~~~v~~v~~~~~~~~~~~t~--s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i 87 (303)
.+.+|...+..++++++ .-++++. +.++...||....... ...+..+...+. .. .|.-.-...
T Consensus 18 ~~~~~~~~~~~~~~s~~-~~~~~~~~~~~~~~~~l~~~~~~~~-----~~~l~~~~~~~~-------~~--~~~~~~~~~ 82 (662)
T 3azo_A 18 LVASRSGRPACVGAVGD-EVWWVAPRPAEAGRATLVRRRADGA-----EESALPAPWNVR-------NR--VFEYSGFPW 82 (662)
T ss_dssp HHHHTCSCCEEEEEETT-EEEEEEEETTTTTEEEEEEECTTSC-----EEESSCTTCCBC-------CC--GGGTCCCCE
T ss_pred HHhhcCCccceeEEcCC-eEEEEecCcccCCcEEEEEECCCCC-----cceeCCCCcccc-------cc--ccccCCccc
Confidence 46778889999999864 3456666 5688999998632211 111111110000 00 011101134
Q ss_pred EEe--eCCCE-EEEEeC-CCcEEEEecC--C-ceeeeeecCC--CCccceEEEEEcCCCCCCEEEEEeCC----------
Q 048118 88 AFS--IDNRQ-IVSASR-DRTIKLWNTL--G-ECKYTIQEGD--AHTEWVSCVRFSPNTLQPTIVSASWD---------- 148 (303)
Q Consensus 88 ~~~--~~~~~-l~t~~~-d~~i~vw~~~--~-~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~d---------- 148 (303)
.|+ |+|++ |+.++. +..|.+++.. + .....+.... .+...+..++|+|++ ..+++++.+
T Consensus 83 ~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg--~~l~~~~~~~~~~~~~~~~ 160 (662)
T 3azo_A 83 AGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPER--GEVWCMAEEFTGEGPSDVR 160 (662)
T ss_dssp EEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTT--TEEEEEEEEECSSSTTCEE
T ss_pred eeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCC--CEEEEEEecccCCCCCCce
Confidence 455 99988 765543 4566666664 2 2222221110 145567899999997 356666655
Q ss_pred CcEEEEECCC------ceeEEEEc-CCCCCeeEEEECCCCCEEEEEeCC--------CeEEEEeCC-CCc--eEEEe-c-
Q 048118 149 RTVKVWNLSN------CKLRATLA-GHTGYVNTVAVSPDGSLCASGGKD--------GVILLWDLA-EGK--RLYSL-D- 208 (303)
Q Consensus 149 g~i~iwd~~~------~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d--------~~v~iwd~~-~~~--~~~~~-~- 208 (303)
..|++||+.+ ++.. .+. .+...+..++|||||++|+.++.+ ..|.+||+. +++ ....+ .
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~ 239 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVR-ELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG 239 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSE-ESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE
T ss_pred eEEEEEECCCCccccCCcee-EEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC
Confidence 5799999987 5543 444 555678889999999999887755 379999998 461 22232 2
Q ss_pred CCCeEEEEEEcCCCeEEEEEc-CC--cEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCE
Q 048118 209 AGAVIHALCFSPNRYWLCAAT-EQ--SIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGST 285 (303)
Q Consensus 209 ~~~~v~~~~~s~~~~~l~~~~-~~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~ 285 (303)
....+..++|+|++.+++.+. ++ .|++||+.+++......... ....+... ..+..++|+|++.+
T Consensus 240 ~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~-------~~~~p~w~-----~~~~~~~~~~~~~~ 307 (662)
T 3azo_A 240 PEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREE-------EFAGPLWT-----PGMRWFAPLANGLI 307 (662)
T ss_dssp TTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSS-------BSSCCCCS-----TTCCSEEECTTSCE
T ss_pred CCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccc-------cccCcccc-----ccCceEeEeCCCEE
Confidence 246788999999998665554 45 68888876665432211100 00000000 00234788999999
Q ss_pred EEEeecCCeEEEEec
Q 048118 286 LFSGYTDGVIRVWGI 300 (303)
Q Consensus 286 l~~gs~Dg~v~~w~~ 300 (303)
+++++. |.+++|.+
T Consensus 308 ~~~~~~-~~~~l~~~ 321 (662)
T 3azo_A 308 AVVHGK-GAAVLGIL 321 (662)
T ss_dssp EEEEBS-SSCEEEEE
T ss_pred EEEEEc-CccEEEEE
Confidence 999998 99999944
No 168
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.65 E-value=1.6e-13 Score=113.06 Aligned_cols=235 Identities=12% Similarity=0.081 Sum_probs=153.7
Q ss_pred ccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEe
Q 048118 11 MRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFS 90 (303)
Q Consensus 11 ~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~ 90 (303)
+..+.....++.|+|++..+++++..++.|..|+.... . . .+..+...+.+++++
T Consensus 23 l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~------~------------------~~~~~~~~~~~l~~~ 77 (296)
T 3e5z_A 23 LADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-L------S------------------PEMHPSHHQNGHCLN 77 (296)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-E------E------------------EEESSCSSEEEEEEC
T ss_pred EecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-e------E------------------EEECCCCCcceeeEC
Confidence 33444567789999876558888999999999987532 1 1 112344568899999
Q ss_pred eCCCEEEEEeCCCcEEEEecCCceeeeee-c-CCCCccceEEEEEcCCCCCCEEEE----Ee-------------CCCcE
Q 048118 91 IDNRQIVSASRDRTIKLWNTLGECKYTIQ-E-GDAHTEWVSCVRFSPNTLQPTIVS----AS-------------WDRTV 151 (303)
Q Consensus 91 ~~~~~l~t~~~d~~i~vw~~~~~~~~~~~-~-~~~~~~~i~~~~~~~~~~~~~~~~----~~-------------~dg~i 151 (303)
++|.++++...++.|.+|+.......... . .......+..++++|++ ..+++ |+ ..+.|
T Consensus 78 ~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G--~l~vtd~~~g~~~~~~~~~~~~~~~~~~l 155 (296)
T 3e5z_A 78 KQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDG--SLWFSDPTYGIDKPEEGYGGEMELPGRWV 155 (296)
T ss_dssp TTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTS--CEEEEECSHHHHCGGGSSCCCCCSSSCEE
T ss_pred CCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCC--CEEEECCccccccccccccccccCCCcEE
Confidence 99998887777789999997432222111 1 11111235678899876 34554 22 13456
Q ss_pred EEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCC-CCce---EEEec-CCCeEEEEEEcCCCeEEE
Q 048118 152 KVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLA-EGKR---LYSLD-AGAVIHALCFSPNRYWLC 226 (303)
Q Consensus 152 ~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~-~~~~---~~~~~-~~~~v~~~~~s~~~~~l~ 226 (303)
..++.. ++. ..+..+......++|+|+++.+++.+.++.|.+||+. .++. ...+. ....+..++++++|.+.+
T Consensus 156 ~~~~~~-g~~-~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v 233 (296)
T 3e5z_A 156 FRLAPD-GTL-SAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWA 233 (296)
T ss_dssp EEECTT-SCE-EEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEE
T ss_pred EEECCC-CCE-EEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEE
Confidence 666654 443 3344555677899999999988777778999999986 4433 12221 223456789999998666
Q ss_pred EEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEE-cCCCCEEEEeecCCeEEE
Q 048118 227 AATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNW-SVDGSTLFSGYTDGVIRV 297 (303)
Q Consensus 227 ~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-sp~~~~l~~gs~Dg~v~~ 297 (303)
+. ++.|.+||.+ ++.+..+... .. +.+++| +|+++.|.+++.++.+++
T Consensus 234 ~~-~~~v~~~~~~-g~~~~~~~~~--------------------~~-~~~~~f~~~d~~~L~v~t~~~l~~~ 282 (296)
T 3e5z_A 234 SA-GDGVHVLTPD-GDELGRVLTP--------------------QT-TSNLCFGGPEGRTLYMTVSTEFWSI 282 (296)
T ss_dssp EE-TTEEEEECTT-SCEEEEEECS--------------------SC-CCEEEEESTTSCEEEEEETTEEEEE
T ss_pred Ec-CCeEEEECCC-CCEEEEEECC--------------------CC-ceeEEEECCCCCEEEEEcCCeEEEE
Confidence 66 8899999986 5554443321 11 356778 689999998888765443
No 169
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.61 E-value=2.1e-13 Score=124.86 Aligned_cols=159 Identities=17% Similarity=0.176 Sum_probs=108.9
Q ss_pred ccCCEEEEEEeeCCCEEEEEeCC----------CcEEEEecCC------ceeeeeecCCCCccceEEEEEcCCCCCCEEE
Q 048118 80 HTKDVLSVAFSIDNRQIVSASRD----------RTIKLWNTLG------ECKYTIQEGDAHTEWVSCVRFSPNTLQPTIV 143 (303)
Q Consensus 80 h~~~i~~i~~~~~~~~l~t~~~d----------~~i~vw~~~~------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 143 (303)
|...+..++|+|+|+.|+.++.| ..|.+|++.+ .....+. ..+...+..++|+|++ ..++
T Consensus 128 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~SpDG--~~la 203 (662)
T 3azo_A 128 GGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELS--DDAHRFVTGPRLSPDG--RQAV 203 (662)
T ss_dssp TCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESS--CSCSSEECCCEECTTS--SEEE
T ss_pred CCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEE--ecCCCcccCceECCCC--CEEE
Confidence 45567889999999999988877 5789999866 3222221 0233456778999997 3566
Q ss_pred EEeCC--------CcEEEEECC-Cc---eeEEEEcCCCCCeeEEEECCCCCEEEEEeCCC--eEEEEeCCCCceEEEecC
Q 048118 144 SASWD--------RTVKVWNLS-NC---KLRATLAGHTGYVNTVAVSPDGSLCASGGKDG--VILLWDLAEGKRLYSLDA 209 (303)
Q Consensus 144 ~~~~d--------g~i~iwd~~-~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~--~v~iwd~~~~~~~~~~~~ 209 (303)
..+.+ ..|++||+. ++ +......++...+..+.|+|+|++++++..++ .|.+||+.+++.......
T Consensus 204 ~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~ 283 (662)
T 3azo_A 204 WLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRR 283 (662)
T ss_dssp EEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCC
T ss_pred EEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccc
Confidence 55544 379999998 46 44444445567899999999999777777788 677777766654332221
Q ss_pred CCe---------EEEEEEcCCCeEEEEEcCCcEEEE--eCCCCc
Q 048118 210 GAV---------IHALCFSPNRYWLCAATEQSIKIW--DLESKS 242 (303)
Q Consensus 210 ~~~---------v~~~~~s~~~~~l~~~~~~~i~iw--d~~~~~ 242 (303)
... +..++|+|++.+++.+..+.+++| |+.+++
T Consensus 284 ~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~ 327 (662)
T 3azo_A 284 EEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVLGILDPESGE 327 (662)
T ss_dssp SSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEEEEEETTTTE
T ss_pred cccccCccccccCceEeEeCCCEEEEEEEcCccEEEEEECCCCc
Confidence 111 456889998877766544777777 665554
No 170
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.60 E-value=7.9e-12 Score=104.53 Aligned_cols=241 Identities=11% Similarity=0.083 Sum_probs=148.9
Q ss_pred ccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEe
Q 048118 11 MRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFS 90 (303)
Q Consensus 11 ~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~ 90 (303)
+..+...+.+++|++++ ++++++..++.|.+|+....... . + ...+...+.+++++
T Consensus 40 ~~~~~~~~~~~~~~~~g-~l~~~~~~~~~i~~~d~~~~~~~-----~-----------~-------~~~~~~~~~~i~~~ 95 (333)
T 2dg1_A 40 ISKKGLQLEGLNFDRQG-QLFLLDVFEGNIFKINPETKEIK-----R-----------P-------FVSHKANPAAIKIH 95 (333)
T ss_dssp EESSCCCEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEE-----E-----------E-------EECSSSSEEEEEEC
T ss_pred EeccCccccCcEECCCC-CEEEEECCCCEEEEEeCCCCcEE-----E-----------E-------eeCCCCCcceEEEC
Confidence 34455567788898765 57778888999999987543211 0 0 00234578899999
Q ss_pred eCCCEEEEEeCC----CcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeC------CCcEEEEECCCce
Q 048118 91 IDNRQIVSASRD----RTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASW------DRTVKVWNLSNCK 160 (303)
Q Consensus 91 ~~~~~l~t~~~d----~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~------dg~i~iwd~~~~~ 160 (303)
+++.++++...+ +.|.+|+..+...............+..+.++|++ ..+++... .+.|..+|..+++
T Consensus 96 ~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g--~l~v~~~~~~~~~~~~~l~~~~~~~~~ 173 (333)
T 2dg1_A 96 KDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKG--GFYFTDFRGYSTNPLGGVYYVSPDFRT 173 (333)
T ss_dssp TTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTS--CEEEEECCCBTTBCCEEEEEECTTSCC
T ss_pred CCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCC--CEEEEeccccccCCCceEEEEeCCCCE
Confidence 999888877666 68999997654322121111233468899999976 34444332 2456666665544
Q ss_pred eEEEEcCCCCCeeEEEECCCCCEE-EEEeCCCeEEEEeCCC-CceEE--------EecCCCeEEEEEEcCCCeEEEEE-c
Q 048118 161 LRATLAGHTGYVNTVAVSPDGSLC-ASGGKDGVILLWDLAE-GKRLY--------SLDAGAVIHALCFSPNRYWLCAA-T 229 (303)
Q Consensus 161 ~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~d~~v~iwd~~~-~~~~~--------~~~~~~~v~~~~~s~~~~~l~~~-~ 229 (303)
... +......+..++|+|+++.| ++.+.++.|.+||+.+ +..+. .+.....+..+++++++.+.++. .
T Consensus 174 ~~~-~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~ 252 (333)
T 2dg1_A 174 VTP-IIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYG 252 (333)
T ss_dssp EEE-EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEET
T ss_pred EEE-eecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcC
Confidence 433 22223457889999999865 4445688999999863 33221 11112467889999998755544 5
Q ss_pred CCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCC
Q 048118 230 EQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDG 293 (303)
Q Consensus 230 ~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg 293 (303)
++.|.+||.+ ++.+..+...... .++...+.+++|+|+++.|.+++.++
T Consensus 253 ~~~v~~~d~~-g~~~~~~~~~~~~--------------~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 253 QGRVLVFNKR-GYPIGQILIPGRD--------------EGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp TTEEEEECTT-SCEEEEEECTTGG--------------GTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred CCEEEEECCC-CCEEEEEEcCCCc--------------cccccCcceEEECCCCCEEEEEeCcc
Confidence 6889999984 5544433221000 00111345688999988777666653
No 171
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.60 E-value=1.8e-12 Score=105.75 Aligned_cols=217 Identities=14% Similarity=0.097 Sum_probs=148.6
Q ss_pred CcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceeccc-CCEEEEEEeeCCCEEEEEeCCCcEE
Q 048118 28 SDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHT-KDVLSVAFSIDNRQIVSASRDRTIK 106 (303)
Q Consensus 28 ~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~-~~i~~i~~~~~~~~l~t~~~d~~i~ 106 (303)
+++|++++.|+.|.+||.++++... .+ ..+. ..+.++.+.|+|++++ +.++.|.
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w-----~~------------------~~~~~~~~~~~~~~pdG~ilv--s~~~~V~ 59 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVW-----EY------------------PLEKGWECNSVAATKAGEILF--SYSKGAK 59 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEE-----EE------------------ECCTTCCCCEEEECTTSCEEE--ECBSEEE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEE-----Ee------------------CCCccCCCcCeEECCCCCEEE--eCCCCEE
Confidence 3689999999999999986543221 11 1122 3467888999999888 3467899
Q ss_pred EEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeC-CCcEEEEECCCceeEEEEc------CCCCCeeEEEECC
Q 048118 107 LWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASW-DRTVKVWNLSNCKLRATLA------GHTGYVNTVAVSP 179 (303)
Q Consensus 107 vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-dg~i~iwd~~~~~~~~~~~------~~~~~i~~~~~~~ 179 (303)
.||..++..+.... .....+.++.+.|++ ..+++.+. ++.+..+|. +++.+.++. .+......+...+
T Consensus 60 ~~d~~G~~~W~~~~--~~~~~~~~~~~~~dG--~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~ 134 (276)
T 3no2_A 60 MITRDGRELWNIAA--PAGCEMQTARILPDG--NALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNK 134 (276)
T ss_dssp EECTTSCEEEEEEC--CTTCEEEEEEECTTS--CEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECT
T ss_pred EECCCCCEEEEEcC--CCCccccccEECCCC--CEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECC
Confidence 99986655554432 122357788888886 46666665 777888886 566555443 1112445667899
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceEEEecCCCeEEEEEEcCCCeEEEEEc-CCcEEEEeCCCCceeeeeeeccccccccc
Q 048118 180 DGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAAT-EQSIKIWDLESKSIVEDLKVDLKTEAEKS 258 (303)
Q Consensus 180 ~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 258 (303)
+|+++++...+++|..||.. ++.+.++.......++...+++.+++++. ++.|..+|.++++++.++...-..
T Consensus 135 ~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~----- 208 (276)
T 3no2_A 135 KGNYLVPLFATSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIE----- 208 (276)
T ss_dssp TSCEEEEETTTTEEEEECTT-SCEEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSB-----
T ss_pred CCCEEEEecCCCEEEEECCC-CCEEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCC-----
Confidence 99999999999999999988 99998887665666777888887766554 557999999999988776421000
Q ss_pred cCccceeeccccceeEEEEEEcCCCCEEEEe
Q 048118 259 EATTATTTIKKKNIYCTSLNWSVDGSTLFSG 289 (303)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~g 289 (303)
. ....++..+...++|..+++.
T Consensus 209 ~---------~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 209 G---------VQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp S---------CCCSEEEEEEECTTSCEEEEE
T ss_pred C---------ccccccccceEcCCCCEEEEe
Confidence 0 011234556666777766665
No 172
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.59 E-value=2.5e-12 Score=104.15 Aligned_cols=236 Identities=6% Similarity=-0.044 Sum_probs=155.2
Q ss_pred ceeeeecCCCCCcEEE-EecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEeeCCCE
Q 048118 17 MVTAIATPIDNSDMIV-TASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSIDNRQ 95 (303)
Q Consensus 17 ~v~~v~~~~~~~~~~~-t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~~~~~ 95 (303)
...++++++++ ++++ +.+.++.|..|+....... ... ..+...+.++++++++.+
T Consensus 25 ~p~~i~~~~~g-~l~v~~~~~~~~i~~~~~~~~~~~------~~~-----------------~~~~~~p~~i~~~~~g~l 80 (270)
T 1rwi_B 25 SPSGVAVDSAG-NVYVTSEGMYGRVVKLATGSTGTT------VLP-----------------FNGLYQPQGLAVDGAGTV 80 (270)
T ss_dssp CEEEEEECTTC-CEEEEECSSSCEEEEECC-----E------ECC-----------------CCSCCSCCCEEECTTCCE
T ss_pred CccceEECCCC-CEEEEccCCCCcEEEecCCCcccc------eEe-----------------eCCcCCcceeEECCCCCE
Confidence 56788888765 5677 5577889999976432110 000 012234667899999886
Q ss_pred EEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEEEcCCCCCeeEE
Q 048118 96 IVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTV 175 (303)
Q Consensus 96 l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~ 175 (303)
+++.. ++.|.+|+..+....... ......+..++++|++ ..+++...++.|.+|+..+.............+..+
T Consensus 81 ~v~~~-~~~i~~~d~~~~~~~~~~--~~~~~~p~~i~~~~~g--~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i 155 (270)
T 1rwi_B 81 YVTDF-NNRVVTLAAGSNNQTVLP--FDGLNYPEGLAVDTQG--AVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGV 155 (270)
T ss_dssp EEEET-TTEEEEECTTCSCCEECC--CCSCSSEEEEEECTTC--CEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCE
T ss_pred EEEcC-CCEEEEEeCCCceEeeee--cCCcCCCcceEECCCC--CEEEEECCCCEEEEEECCCceeEeeccccCCCceeE
Confidence 66655 889999997654322221 1122457889999875 356666667889999765544332222233467889
Q ss_pred EECCCCCEEEEEeCCCeEEEEeCCCCceEEEecC-CCeEEEEEEcCCCeEEEEE-cCCcEEEEeCCCCceeeeeeecccc
Q 048118 176 AVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDA-GAVIHALCFSPNRYWLCAA-TEQSIKIWDLESKSIVEDLKVDLKT 253 (303)
Q Consensus 176 ~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~-~~~~i~iwd~~~~~~~~~~~~~~~~ 253 (303)
+++|+++++++...++.|.+||............ ...+..+++++++.+.++. .++.|.+||........ ..
T Consensus 156 ~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~-~~----- 229 (270)
T 1rwi_B 156 AVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV-LP----- 229 (270)
T ss_dssp EECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE-CC-----
T ss_pred EEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee-ec-----
Confidence 9999999777777788999999877654433222 2567889999998655554 47789999986543211 00
Q ss_pred ccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEecc
Q 048118 254 EAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~ 301 (303)
......+..++++|+|.++++...+++|+++++.
T Consensus 230 --------------~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~ 263 (270)
T 1rwi_B 230 --------------FTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSL 263 (270)
T ss_dssp --------------CCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCC
T ss_pred --------------cCCCCCceeEEECCCCCEEEEECCCCEEEEEcCC
Confidence 0011235678999999988899999999999874
No 173
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.59 E-value=7.6e-12 Score=102.37 Aligned_cols=200 Identities=14% Similarity=0.229 Sum_probs=139.1
Q ss_pred ecccCCEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecC---CCCccceEEEEEc-CCCCCCEEEEEeC-CCcEE
Q 048118 78 VGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEG---DAHTEWVSCVRFS-PNTLQPTIVSASW-DRTVK 152 (303)
Q Consensus 78 ~~h~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~---~~~~~~i~~~~~~-~~~~~~~~~~~~~-dg~i~ 152 (303)
.++-..+.++++++++.++++...++.|.+|+..+.....+... ..+...+..+++. +++ ..+++... ++.|+
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g--~l~v~~~~~~~~i~ 103 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSG--DIIVTERSPTHQIQ 103 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTT--EEEEEECGGGCEEE
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCC--eEEEEcCCCCCEEE
Confidence 34556788999999999888888899999999765433322110 1233457889984 543 23444322 88999
Q ss_pred EEECCCceeEEEEcC-CCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEec---CCCeEEEEEEcCCCeEEEEE
Q 048118 153 VWNLSNCKLRATLAG-HTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLD---AGAVIHALCFSPNRYWLCAA 228 (303)
Q Consensus 153 iwd~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~~~ 228 (303)
+|| .+++....+.. +...+..++++|+++++++...++.|.+||.. ++.+..+. ....+..++++|++.++++.
T Consensus 104 ~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~ 181 (286)
T 1q7f_A 104 IYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISD 181 (286)
T ss_dssp EEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEE
T ss_pred EEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEE
Confidence 999 45665555543 34578899999999988887788999999964 55555553 23468899999998766654
Q ss_pred -cCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCC-eEEEEec
Q 048118 229 -TEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDG-VIRVWGI 300 (303)
Q Consensus 229 -~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg-~v~~w~~ 300 (303)
.++.|++||... +.+..+.. .+....+..++++|+|.++++...++ .|.+|+.
T Consensus 182 ~~~~~i~~~~~~g-~~~~~~~~------------------~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~ 236 (286)
T 1q7f_A 182 NRAHCVKVFNYEG-QYLRQIGG------------------EGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ 236 (286)
T ss_dssp GGGTEEEEEETTC-CEEEEESC------------------TTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT
T ss_pred CCCCEEEEEcCCC-CEEEEEcc------------------CCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC
Confidence 478999999753 33332211 00112346789999999888888886 9999985
No 174
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.58 E-value=1.9e-12 Score=108.26 Aligned_cols=241 Identities=9% Similarity=0.026 Sum_probs=154.2
Q ss_pred cceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEeeCCCE
Q 048118 16 DMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSIDNRQ 95 (303)
Q Consensus 16 ~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~~~~~ 95 (303)
..|.++.|++.. ..++..+.++.++.|.-.. .. .+..+...+.+++|++++.+
T Consensus 6 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--------~~------------------~~~~~~~~~~~~~~~~~g~l 58 (333)
T 2dg1_A 6 QDLPTLFYSGKS-NSAVPIISESELQTITAEP--------WL------------------EISKKGLQLEGLNFDRQGQL 58 (333)
T ss_dssp CCCCBCCSCGGG-GCSSCCCCGGGSCEEECEE--------EE------------------EEESSCCCEEEEEECTTSCE
T ss_pred cccceeeecCCc-cceeEEeecccCcccccce--------eE------------------EEeccCccccCcEECCCCCE
Confidence 457778888764 4466667788888883210 11 11234445678999999998
Q ss_pred EEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCC----CcEEEEECCCceeEEEEc--CCC
Q 048118 96 IVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWD----RTVKVWNLSNCKLRATLA--GHT 169 (303)
Q Consensus 96 l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d----g~i~iwd~~~~~~~~~~~--~~~ 169 (303)
++++..++.|.+|+..+........ .+...+.+++++|++ ..+++...+ +.|.+||..+++....+. .+.
T Consensus 59 ~~~~~~~~~i~~~d~~~~~~~~~~~--~~~~~~~~i~~~~dg--~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~ 134 (333)
T 2dg1_A 59 FLLDVFEGNIFKINPETKEIKRPFV--SHKANPAAIKIHKDG--RLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTA 134 (333)
T ss_dssp EEEETTTCEEEEECTTTCCEEEEEE--CSSSSEEEEEECTTS--CEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSC
T ss_pred EEEECCCCEEEEEeCCCCcEEEEee--CCCCCcceEEECCCC--cEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccC
Confidence 8888889999999976543322221 234568899999986 345554444 589999988776543333 234
Q ss_pred CCeeEEEECCCCCEEEEEeC------CCeEEEEeCCCCceEEEecCCCeEEEEEEcCCCeEE-EE-EcCCcEEEEeCCC-
Q 048118 170 GYVNTVAVSPDGSLCASGGK------DGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWL-CA-ATEQSIKIWDLES- 240 (303)
Q Consensus 170 ~~i~~~~~~~~~~~l~~~~~------d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~-~~~~~i~iwd~~~- 240 (303)
..+..++++|+|+++++... .+.|..+|..+++.............++|+|++..+ ++ ..++.|++||+++
T Consensus 135 ~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~ 214 (333)
T 2dg1_A 135 YCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDD 214 (333)
T ss_dssp CCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTT
T ss_pred CcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCC
Confidence 56889999999988776653 356777776654433222222347789999998644 33 3468999999863
Q ss_pred CceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEec
Q 048118 241 KSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 300 (303)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~ 300 (303)
+..+..+..... ...... ..+..++++++|.++++...++.|.+||.
T Consensus 215 g~~~~~~~~~~~------------~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~ 261 (333)
T 2dg1_A 215 GVTIQPFGATIP------------YYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNK 261 (333)
T ss_dssp SSSEEEEEEEEE------------EECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred CcCcccccceEE------------EecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECC
Confidence 332221110000 000111 23466889999998888888899999986
No 175
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.58 E-value=2.7e-13 Score=115.77 Aligned_cols=192 Identities=13% Similarity=0.126 Sum_probs=127.9
Q ss_pred EEEeeCCCEEEEEeC-CCc--EEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEE
Q 048118 87 VAFSIDNRQIVSASR-DRT--IKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRA 163 (303)
Q Consensus 87 i~~~~~~~~l~t~~~-d~~--i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~ 163 (303)
.+|+|+|++|+.++. ++. |.+||..+.....+. ..+...+..+.|+|++ ..++.++.++.|++||+.+++...
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt--~~~~~~~~~~~~spdg--~~l~~~~~~~~l~~~d~~~g~~~~ 116 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLT--EGRGDNTFGGFLSPDD--DALFYVKDGRNLMRVDLATLEENV 116 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECC--CSSCBCSSSCEECTTS--SEEEEEETTTEEEEEETTTCCEEE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEee--eCCCCCccceEEcCCC--CEEEEEeCCCeEEEEECCCCccee
Confidence 689999999988887 664 777787654333222 2233333456799987 468888888999999999888766
Q ss_pred EEcCCCCCeeEE--EECCCCCEEEEE----------------------eCCCeEEEEeCCCCceEEEecCCCeEEEEEEc
Q 048118 164 TLAGHTGYVNTV--AVSPDGSLCASG----------------------GKDGVILLWDLAEGKRLYSLDAGAVIHALCFS 219 (303)
Q Consensus 164 ~~~~~~~~i~~~--~~~~~~~~l~~~----------------------~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s 219 (303)
.+..+...+... .++|++++++.. ..+..|.+||+.+++..........+..++|+
T Consensus 117 ~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~s 196 (388)
T 3pe7_A 117 VYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYR 196 (388)
T ss_dssp EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEE
T ss_pred eeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEEC
Confidence 665555544333 348999988742 24478999999988765444445668899999
Q ss_pred C-CCeEEEEEc-------CCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeec
Q 048118 220 P-NRYWLCAAT-------EQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYT 291 (303)
Q Consensus 220 ~-~~~~l~~~~-------~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~ 291 (303)
| ++..++... ...|+++|..+++... +.. ......+....|+|||+.|+..+.
T Consensus 197 p~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~------------------~~~~~~~~~~~~spdg~~l~~~~~ 257 (388)
T 3pe7_A 197 PYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRK-VKT------------------HAEGESCTHEFWVPDGSALVYVSY 257 (388)
T ss_dssp TTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEE-SCC------------------CCTTEEEEEEEECTTSSCEEEEEE
T ss_pred CCCCCEEEEEEecCCCCCcceEEEEeCCCCceEE-eee------------------CCCCcccccceECCCCCEEEEEec
Confidence 9 987766543 2378888876543221 110 000123456789999997765433
Q ss_pred -CC----eEEEEecc
Q 048118 292 -DG----VIRVWGIG 301 (303)
Q Consensus 292 -Dg----~v~~w~~~ 301 (303)
++ .|.+||+.
T Consensus 258 ~~~~~~~~l~~~d~~ 272 (388)
T 3pe7_A 258 LKGSPDRFIYSADPE 272 (388)
T ss_dssp ETTCCCEEEEEECTT
T ss_pred CCCCCcceEEEEecC
Confidence 22 39999874
No 176
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.58 E-value=2.3e-12 Score=118.93 Aligned_cols=241 Identities=9% Similarity=0.076 Sum_probs=151.3
Q ss_pred ccccceeeeecCCCCCcEEEEecCCC-----cEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEE
Q 048118 13 AHTDMVTAIATPIDNSDMIVTASRDK-----SIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSV 87 (303)
Q Consensus 13 ~h~~~v~~v~~~~~~~~~~~t~s~d~-----~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i 87 (303)
+|...+..++|+|++. +||.++.++ +|++||+..++.... . ..+ ..+..+
T Consensus 122 ~~~~~~~~~~~SPDg~-~la~~~~~~G~~~~~i~v~d~~tg~~~~~----~-------------------~~~-~~~~~~ 176 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGE-YFAYGLSASGSDWVTIKFMKVDGAKELPD----V-------------------LER-VKFSCM 176 (710)
T ss_dssp TSCEEEEEEEECTTSS-EEEEEEEETTCSCEEEEEEETTTTEEEEE----E-------------------EEE-ECSCCE
T ss_pred CCCEEEEEEEECCCCC-EEEEEEcCCCCceEEEEEEECCCCCCCcc----c-------------------ccC-cccceE
Confidence 3444678899999864 666554433 899999875432100 0 001 124468
Q ss_pred EEeeCCCEEEEEeCCCc----------------EEEEecCCcee--eeeecCCCCccceEEEEEcCCCCCCEEEEEeC--
Q 048118 88 AFSIDNRQIVSASRDRT----------------IKLWNTLGECK--YTIQEGDAHTEWVSCVRFSPNTLQPTIVSASW-- 147 (303)
Q Consensus 88 ~~~~~~~~l~t~~~d~~----------------i~vw~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-- 147 (303)
+|+|+|+.|+.++.++. |.+|++.+... ..+.....+...+..+.|+|++. .++..+.
T Consensus 177 ~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~--~l~~~~~~~ 254 (710)
T 2xdw_A 177 AWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGR--YVLLSIREG 254 (710)
T ss_dssp EECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSC--EEEEEEECS
T ss_pred EEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCC--EEEEEEEcc
Confidence 99999999998888766 99999854321 12222222345577899999873 4444433
Q ss_pred ---CCcEEEEECCC------ce-eEEEEcCCCCCeeEEEECCCCCEEEEEeCC----CeEEEEeCCCCce--EEEe-cCC
Q 048118 148 ---DRTVKVWNLSN------CK-LRATLAGHTGYVNTVAVSPDGSLCASGGKD----GVILLWDLAEGKR--LYSL-DAG 210 (303)
Q Consensus 148 ---dg~i~iwd~~~------~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----~~v~iwd~~~~~~--~~~~-~~~ 210 (303)
+..|++||+.+ +. ....+..+...+.. .|+|+|+.|+..+.+ +.|.+||+.++.. ...+ ...
T Consensus 255 ~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~ 333 (710)
T 2xdw_A 255 CDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEH 333 (710)
T ss_dssp SSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCC
T ss_pred CCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCC
Confidence 56899999975 42 34556656655554 478888887666543 3699999987641 1222 222
Q ss_pred --CeEEEEEEcCCCeEEEEE-cCC--cEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCE
Q 048118 211 --AVIHALCFSPNRYWLCAA-TEQ--SIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGST 285 (303)
Q Consensus 211 --~~v~~~~~s~~~~~l~~~-~~~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~ 285 (303)
..+..++|++++.+++.. .++ .|++||+.+++.+..+.. ....+..++++|++..
T Consensus 334 ~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~--------------------~~~~v~~~~~s~d~~~ 393 (710)
T 2xdw_A 334 EKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPL--------------------EVGSVVGYSGQKKDTE 393 (710)
T ss_dssp SSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECC--------------------CSSEEEEEECCTTCSE
T ss_pred CCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCC--------------------CCceEEEEecCCCCCE
Confidence 368889998777666554 455 577888866665443321 1224566788999876
Q ss_pred EEEe----ecCCeEEEEecc
Q 048118 286 LFSG----YTDGVIRVWGIG 301 (303)
Q Consensus 286 l~~g----s~Dg~v~~w~~~ 301 (303)
++.. ...+++..||+.
T Consensus 394 l~~~~ss~~~P~~i~~~d~~ 413 (710)
T 2xdw_A 394 IFYQFTSFLSPGIIYHCDLT 413 (710)
T ss_dssp EEEEEECSSCCCEEEEEETT
T ss_pred EEEEEeCCCCCCEEEEEECC
Confidence 6533 235789899874
No 177
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.57 E-value=1.1e-13 Score=128.27 Aligned_cols=148 Identities=17% Similarity=0.133 Sum_probs=100.3
Q ss_pred EEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCC---CccceEEEEEcCCCCCCEEEEEeCC---------CcE
Q 048118 84 VLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDA---HTEWVSCVRFSPNTLQPTIVSASWD---------RTV 151 (303)
Q Consensus 84 i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~d---------g~i 151 (303)
...+.|+|++++++++ |+.|++|+..+.....+..... .......+.|+|++ ..++.++.+ +.+
T Consensus 19 ~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg--~~l~~~~~~~~~~r~~~~~~~ 94 (740)
T 4a5s_A 19 LYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDG--QFILLEYNYVKQWRHSYTASY 94 (740)
T ss_dssp CCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTS--SEEEEEEEEEECSSSCEEEEE
T ss_pred ccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCC--CEEEEEECCeeeEEEccceEE
Confidence 4578999999988886 8999999986543332221111 11122347899997 356666654 567
Q ss_pred EEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEec-C-CCeE----------------
Q 048118 152 KVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLD-A-GAVI---------------- 213 (303)
Q Consensus 152 ~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~-~-~~~v---------------- 213 (303)
.+||+.+++.. .+..+...+..++|||||+.||.++ ++.|++||+.+++...... . ...+
T Consensus 95 ~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~ 172 (740)
T 4a5s_A 95 DIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSA 172 (740)
T ss_dssp EEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSS
T ss_pred EEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCC
Confidence 79999988764 3566777899999999999998884 7899999998876543211 1 1112
Q ss_pred -EEEEEcCCCeEEEEEc--CCcEEEEe
Q 048118 214 -HALCFSPNRYWLCAAT--EQSIKIWD 237 (303)
Q Consensus 214 -~~~~~s~~~~~l~~~~--~~~i~iwd 237 (303)
..++|||||..|+... +..+.+|+
T Consensus 173 ~~~~~wSpDg~~la~~~~d~~~v~~~~ 199 (740)
T 4a5s_A 173 YSALWWSPNGTFLAYAQFNDTEVPLIE 199 (740)
T ss_dssp SBCEEECTTSSEEEEEEEECTTCCEEE
T ss_pred CcceEECCCCCEEEEEEEcccCCceEE
Confidence 2488999998776542 33344444
No 178
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.57 E-value=1.5e-13 Score=117.57 Aligned_cols=231 Identities=15% Similarity=0.083 Sum_probs=139.9
Q ss_pred eeeeecCCCCCcEEEEe-cCCC--cEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCC-EEEEEEeeCC
Q 048118 18 VTAIATPIDNSDMIVTA-SRDK--SIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKD-VLSVAFSIDN 93 (303)
Q Consensus 18 v~~v~~~~~~~~~~~t~-s~d~--~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~-i~~i~~~~~~ 93 (303)
+..++|+|++. +|+.. ..++ .|.+|++...+. . .+. .+... ...+.|+|+|
T Consensus 38 ~~~~~~SpdG~-~l~~~~~~~g~~~l~~~d~~~~~~-----~-~l~------------------~~~~~~~~~~~~spdg 92 (396)
T 3c5m_A 38 FYQKCFTQDGK-KLLFAGDFDGNRNYYLLNLETQQA-----V-QLT------------------EGKGDNTFGGFISTDE 92 (396)
T ss_dssp TTSCCBCTTSC-EEEEEECTTSSCEEEEEETTTTEE-----E-ECC------------------CSSCBCTTTCEECTTS
T ss_pred eecCcCCCCCC-EEEEEEecCCCceEEEEECCCCcE-----E-Eee------------------cCCCCccccceECCCC
Confidence 67888999865 55544 3333 577777653321 0 010 11111 2236799999
Q ss_pred CEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEE-------------------EEEcCCCCCCEEEEE-----eCCC
Q 048118 94 RQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSC-------------------VRFSPNTLQPTIVSA-----SWDR 149 (303)
Q Consensus 94 ~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~-------------------~~~~~~~~~~~~~~~-----~~dg 149 (303)
++|+.++.++.|.+|+..+.....+... +...... +.|+|++. .++.. ..+.
T Consensus 93 ~~l~~~~~~~~l~~~d~~~~~~~~~~~~--~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~--~~~~~~~~~~~~~~ 168 (396)
T 3c5m_A 93 RAFFYVKNELNLMKVDLETLEEQVIYTV--DEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTS--WEKFAEFYHTNPTC 168 (396)
T ss_dssp SEEEEEETTTEEEEEETTTCCEEEEEEC--CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCS--HHHHHHHHHTCCCE
T ss_pred CEEEEEEcCCcEEEEECCCCCcEEEEec--ccccCCCCCEEEeccCCccccccccccccCCCCc--ceeeeeeccCCCcc
Confidence 9999999999999999865433222221 1111211 23455542 22221 3556
Q ss_pred cEEEEECCCceeEEEEcCCCCCeeEEEECC-CCCEEEEEeCC------CeEEEEeCCCCceEEEecC--CCeEEEEEEcC
Q 048118 150 TVKVWNLSNCKLRATLAGHTGYVNTVAVSP-DGSLCASGGKD------GVILLWDLAEGKRLYSLDA--GAVIHALCFSP 220 (303)
Q Consensus 150 ~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d------~~v~iwd~~~~~~~~~~~~--~~~v~~~~~s~ 220 (303)
.|.+||+.+++..... .+...+..+.|+| +++.|+..+.+ ..|.+||+..++....... ...+..++|+|
T Consensus 169 ~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~sp 247 (396)
T 3c5m_A 169 RLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIP 247 (396)
T ss_dssp EEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECT
T ss_pred eEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECC
Confidence 7999999887765443 4566788999999 78877666543 4688899876543222221 23578899999
Q ss_pred CCeEEEE-EcC-----CcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcC-CCCEEEEee---
Q 048118 221 NRYWLCA-ATE-----QSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSV-DGSTLFSGY--- 290 (303)
Q Consensus 221 ~~~~l~~-~~~-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp-~~~~l~~gs--- 290 (303)
++..|+. +.+ +.|++||+++++...... ... .. ..|+| +|+++++++
T Consensus 248 dg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~------------------~~~----~~-~~~s~~dg~~l~~~~~~~ 304 (396)
T 3c5m_A 248 DGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV------------------MPP----CS-HLMSNFDGSLMVGDGCDA 304 (396)
T ss_dssp TSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE------------------CCS----EE-EEEECSSSSEEEEEECCC
T ss_pred CCCEEEEEecCCCCccceEEEEECCCCCeEEeee------------------CCC----CC-CCccCCCCceEEEecCCc
Confidence 9875443 332 349999998775432110 000 12 67999 999888765
Q ss_pred -------------cCCeEEEEecc
Q 048118 291 -------------TDGVIRVWGIG 301 (303)
Q Consensus 291 -------------~Dg~v~~w~~~ 301 (303)
.++.|.+||+.
T Consensus 305 p~~~~~~~~~~~~~~~~i~~~d~~ 328 (396)
T 3c5m_A 305 PVDVADADSYNIENDPFLYVLNTK 328 (396)
T ss_dssp ----------CCCCCCEEEEEETT
T ss_pred ceeeccccccccCCCCcEEEEecc
Confidence 34789999874
No 179
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.57 E-value=1.2e-11 Score=103.46 Aligned_cols=234 Identities=9% Similarity=0.012 Sum_probs=153.2
Q ss_pred eeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEeeCCCEEE
Q 048118 18 VTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSIDNRQIV 97 (303)
Q Consensus 18 v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~~~~~l~ 97 (303)
...+.++ +..++++...++.|.+||....+.. ..+ .....+..+++++++.+++
T Consensus 46 ~~~i~~~--~~~lyv~~~~~~~v~viD~~t~~~~-----~~i-------------------~~~~~p~~i~~~~~g~lyv 99 (328)
T 3dsm_A 46 AQSMVIR--DGIGWIVVNNSHVIFAIDINTFKEV-----GRI-------------------TGFTSPRYIHFLSDEKAYV 99 (328)
T ss_dssp EEEEEEE--TTEEEEEEGGGTEEEEEETTTCCEE-----EEE-------------------ECCSSEEEEEEEETTEEEE
T ss_pred ceEEEEE--CCEEEEEEcCCCEEEEEECcccEEE-----EEc-------------------CCCCCCcEEEEeCCCeEEE
Confidence 4556554 3567777788899999998654321 111 1124567899999986555
Q ss_pred EEeCCCcEEEEecCCceee-eeecCC--CCccceEEEEEcCCCCCCEEEEEe--CCCcEEEEECCCceeEEEEcCCCCCe
Q 048118 98 SASRDRTIKLWNTLGECKY-TIQEGD--AHTEWVSCVRFSPNTLQPTIVSAS--WDRTVKVWNLSNCKLRATLAGHTGYV 172 (303)
Q Consensus 98 t~~~d~~i~vw~~~~~~~~-~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~i 172 (303)
+...++.|.+||..+.... .+.... ........+++. + ..+..+. .++.|.++|..+++....+... ...
T Consensus 100 ~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~-~---~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g-~~p 174 (328)
T 3dsm_A 100 TQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQY-G---KYVYVNCWSYQNRILKIDTETDKVVDELTIG-IQP 174 (328)
T ss_dssp EEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEE-T---TEEEEEECTTCCEEEEEETTTTEEEEEEECS-SCB
T ss_pred EECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEE-C---CEEEEEcCCCCCEEEEEECCCCeEEEEEEcC-CCc
Confidence 5548899999998654332 222111 011123445552 2 2344444 4889999999998887777643 345
Q ss_pred eEEEECCCCCEEEEEeCC----------CeEEEEeCCCCceEEEecC--CCeEEEEEEcCCCeEEEEEcCCcEEEEeCCC
Q 048118 173 NTVAVSPDGSLCASGGKD----------GVILLWDLAEGKRLYSLDA--GAVIHALCFSPNRYWLCAATEQSIKIWDLES 240 (303)
Q Consensus 173 ~~~~~~~~~~~l~~~~~d----------~~v~iwd~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~ 240 (303)
..+.++|+|++++++..+ +.|.++|..+++....+.. +.....++|+|++..+.++.. .|++||..+
T Consensus 175 ~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~-~v~~~d~~t 253 (328)
T 3dsm_A 175 TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN-DIWRMPVEA 253 (328)
T ss_dssp CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS-SEEEEETTC
T ss_pred cceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc-EEEEEECCC
Confidence 678999999877776654 7999999998887766643 446889999998876666554 999999987
Q ss_pred CceeeeeeeccccccccccCccceeeccccceeEEEEEEcCC-CCEEEEe----ecCCeEEEEecc
Q 048118 241 KSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVD-GSTLFSG----YTDGVIRVWGIG 301 (303)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~-~~~l~~g----s~Dg~v~~w~~~ 301 (303)
+++...... .........++++|+ +..+++. ..++.|.+||..
T Consensus 254 ~~~~~~~~~------------------~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 254 DRVPVRPFL------------------EFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp SSCCSSCSB------------------CCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred Cceeeeeee------------------cCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 765311000 000123467899995 5555565 678999999864
No 180
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.54 E-value=2.9e-12 Score=108.65 Aligned_cols=72 Identities=8% Similarity=0.156 Sum_probs=59.6
Q ss_pred EEECCCCCEEEEEeC-----------CCeEEEEeCCCCceEEEecCCCeEEEEEEcCCCeEEEEEcCCcEEEEeCCCC--
Q 048118 175 VAVSPDGSLCASGGK-----------DGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESK-- 241 (303)
Q Consensus 175 ~~~~~~~~~l~~~~~-----------d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~-- 241 (303)
++++|+++.+.++.. ..+|.+||+.+++.+.++..+. ...++|+|++.+|+++.++.|.+||.+++
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~~~v~v~D~~t~~l 337 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDGGNVNVYDISQPEP 337 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEECSSCEEEEECSSSSC
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeCCCeEEEEECCCCcc
Confidence 688999887766543 3489999999999999987777 99999999998777776799999999998
Q ss_pred ceeeee
Q 048118 242 SIVEDL 247 (303)
Q Consensus 242 ~~~~~~ 247 (303)
+++..+
T Consensus 338 ~~~~~i 343 (361)
T 2oiz_A 338 KLLRTI 343 (361)
T ss_dssp EEEEEE
T ss_pred eeeEEe
Confidence 776543
No 181
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.53 E-value=1.6e-13 Score=117.29 Aligned_cols=255 Identities=13% Similarity=0.044 Sum_probs=142.0
Q ss_pred eeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceE---EEEeCCCCceecccCCEEEEEEeeCCCEE
Q 048118 20 AIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQ---DVVLSSDGQFVGHTKDVLSVAFSIDNRQI 96 (303)
Q Consensus 20 ~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~---~~~~~~~~~~~~h~~~i~~i~~~~~~~~l 96 (303)
.+.|+|++ ++|+.++.++.|.+|++...+.. .....+..+.. .+++........ -....+.|+|+++.+
T Consensus 85 ~~~~spdg-~~l~~~~~~~~l~~~d~~~~~~~-----~~~~~~~~~~~~g~~l~~~~~~~~~~--~~~~~~~~spdg~~~ 156 (396)
T 3c5m_A 85 GGFISTDE-RAFFYVKNELNLMKVDLETLEEQ-----VIYTVDEEWKGYGTWVANSDCTKLVG--IEILKRDWQPLTSWE 156 (396)
T ss_dssp TCEECTTS-SEEEEEETTTEEEEEETTTCCEE-----EEEECCTTEEEEEEEEECTTSSEEEE--EEEEGGGCCCCCSHH
T ss_pred cceECCCC-CEEEEEEcCCcEEEEECCCCCcE-----EEEecccccCCCCCEEEeccCCcccc--ccccccccCCCCcce
Confidence 36788875 57888888889999998654321 11111111111 111111110000 000113567888776
Q ss_pred EEE-----eCCCcEEEEecCCceeeeeecCCCCccceEEEEEcC-CCCCCEEEEEeCC------CcEEEEECCCceeEEE
Q 048118 97 VSA-----SRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSP-NTLQPTIVSASWD------RTVKVWNLSNCKLRAT 164 (303)
Q Consensus 97 ~t~-----~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~d------g~i~iwd~~~~~~~~~ 164 (303)
+.. ..+..|.+||+.+.....+. .+...+..+.|+| ++ ..++..+.+ ..|.+||+.+++...
T Consensus 157 ~~~~~~~~~~~~~l~~~d~~~g~~~~~~---~~~~~~~~~~~sp~dg--~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~- 230 (396)
T 3c5m_A 157 KFAEFYHTNPTCRLIKVDIETGELEVIH---QDTAWLGHPIYRPFDD--STVGFCHEGPHDLVDARMWLVNEDGSNVRK- 230 (396)
T ss_dssp HHHHHHHTCCCEEEEEEETTTCCEEEEE---EESSCEEEEEEETTEE--EEEEEEECSCSSSCSCCCEEEETTSCCCEE-
T ss_pred eeeeeccCCCcceEEEEECCCCcEEeec---cCCcccccceECCCCC--CEEEEEecCCCCCCCceEEEEECCCCceeE-
Confidence 544 35667888997654332222 2344578899999 54 234444332 468888987655333
Q ss_pred EcCC--CCCeeEEEECCCCCEEEEEeCC-----CeEEEEeCCCCceEEEecCCCeEEEEEEcC-CCeEEEEEc-------
Q 048118 165 LAGH--TGYVNTVAVSPDGSLCASGGKD-----GVILLWDLAEGKRLYSLDAGAVIHALCFSP-NRYWLCAAT------- 229 (303)
Q Consensus 165 ~~~~--~~~i~~~~~~~~~~~l~~~~~d-----~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~------- 229 (303)
+..+ ...+..+.|+|+|+.|+.++.+ +.|.+||+.+++......... .. ..|+| ++.+++.+.
T Consensus 231 l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~-~~-~~~s~~dg~~l~~~~~~~p~~~ 308 (396)
T 3c5m_A 231 IKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP-CS-HLMSNFDGSLMVGDGCDAPVDV 308 (396)
T ss_dssp SSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS-EE-EEEECSSSSEEEEEECCC----
T ss_pred eeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC-CC-CCccCCCCceEEEecCCcceee
Confidence 3222 2257788999999987776543 459999998876533222222 33 88999 987776532
Q ss_pred ----------CCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeec-CCeEEEE
Q 048118 230 ----------EQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYT-DGVIRVW 298 (303)
Q Consensus 230 ----------~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~-Dg~v~~w 298 (303)
+..|++||+.+++.. .+..... .... ............+|+|+|+.|+.++. ++...+|
T Consensus 309 ~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~------~~~~---~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~ 378 (396)
T 3c5m_A 309 ADADSYNIENDPFLYVLNTKAKSAQ-KLCKHST------SWDV---LDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIY 378 (396)
T ss_dssp ------CCCCCCEEEEEETTTTBCC-EEEECCC------CCCC---BTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEE
T ss_pred ccccccccCCCCcEEEEecccCceE-EccCCCC------cccc---ccccccCCCCCceEccCCCeEEEEecCCCCceEE
Confidence 367999999877542 1211000 0000 00000001234679999998776654 6666676
Q ss_pred ec
Q 048118 299 GI 300 (303)
Q Consensus 299 ~~ 300 (303)
.+
T Consensus 379 ~~ 380 (396)
T 3c5m_A 379 IA 380 (396)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 182
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.53 E-value=2.6e-12 Score=118.38 Aligned_cols=241 Identities=11% Similarity=-0.012 Sum_probs=143.4
Q ss_pred ccccceeeeecCCCCCcEEE-----EecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEE
Q 048118 13 AHTDMVTAIATPIDNSDMIV-----TASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSV 87 (303)
Q Consensus 13 ~h~~~v~~v~~~~~~~~~~~-----t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i 87 (303)
+|...+..++|+|++. +|| +|+.+.+|++||+..++... .. .+... ....+
T Consensus 118 ~~~~~~~~~~~SPDG~-~la~~~~~~G~~~~~i~v~dl~tg~~~~-------~~--------------~~~~~--~~~~~ 173 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGK-KVAFAQKPNAADEAVLHVIDVDSGEWSK-------VD--------------VIEGG--KYATP 173 (695)
T ss_dssp SSCEEEEEEEECTTSS-EEEEEEEETTCSCCEEEEEETTTCCBCS-------SC--------------CBSCC--TTCCC
T ss_pred CCCEEEEEEEECCCCC-EEEEEECCCCCceEEEEEEECCCCCCcC-------Cc--------------ccCcc--cccce
Confidence 4656788999999864 666 44556789999997643210 00 00000 01468
Q ss_pred EEeeCCCEEEEEeCCCc-------------EEEEecCCcee--eeeecCCCCccceEEEEEcCCCCCCEEEEEeCCC---
Q 048118 88 AFSIDNRQIVSASRDRT-------------IKLWNTLGECK--YTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDR--- 149 (303)
Q Consensus 88 ~~~~~~~~l~t~~~d~~-------------i~vw~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg--- 149 (303)
+|+|+|+.|+.++.|.. |.+|++.+... ..+.....+...+..+.|+|++. .++..+.++
T Consensus 174 ~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~--~l~~~~~~~~~~ 251 (695)
T 2bkl_A 174 KWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGK--YLFVYILRGWSE 251 (695)
T ss_dssp EECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSC--CEEEEEEETTTE
T ss_pred EEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCC--EEEEEEeCCCCc
Confidence 89999999999988776 99999864321 12222233445678899999973 344444444
Q ss_pred -cEEEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEe---CCCeEEEEeCCCCce---EEEecC--CCeEEEEEEcC
Q 048118 150 -TVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGG---KDGVILLWDLAEGKR---LYSLDA--GAVIHALCFSP 220 (303)
Q Consensus 150 -~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~---~d~~v~iwd~~~~~~---~~~~~~--~~~v~~~~~s~ 220 (303)
.|++++..+++.. .+..+...+....+ +++.+++.+. .++.|.+||+.+++. ...+.. ...+..++|+
T Consensus 252 ~~l~~~~~~~~~~~-~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~- 328 (695)
T 2bkl_A 252 NDVYWKRPGEKDFR-LLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV- 328 (695)
T ss_dssp EEEEEECTTCSSCE-EEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-
T ss_pred eEEEEEcCCCCceE-EeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-
Confidence 6777766555433 34445555566666 5566444443 258999999987642 222222 4567888888
Q ss_pred CCeEE-EEEcCCcEEEEeCC-CCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEE----EeecCCe
Q 048118 221 NRYWL-CAATEQSIKIWDLE-SKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLF----SGYTDGV 294 (303)
Q Consensus 221 ~~~~l-~~~~~~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~----~gs~Dg~ 294 (303)
++.++ ....++..++|.+. .++....+... ....+..++++|++..|+ +....++
T Consensus 329 ~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~-------------------~~~~v~~~~~s~d~~~l~~~~ss~~~P~~ 389 (695)
T 2bkl_A 329 GGHLSLEYLKDATSEVRVATLKGKPVRTVQLP-------------------GVGAASNLMGLEDLDDAYYVFTSFTTPRQ 389 (695)
T ss_dssp TTEEEEEEEETTEEEEEEEETTCCEEEECCCS-------------------SSSEECCCBSCTTCSEEEEEEEETTEEEE
T ss_pred CCEEEEEEEECCEEEEEEEeCCCCeeEEecCC-------------------CCeEEEEeecCCCCCEEEEEEcCCCCCCE
Confidence 44444 44567766666543 23322222110 012344567889888766 3334578
Q ss_pred EEEEecc
Q 048118 295 IRVWGIG 301 (303)
Q Consensus 295 v~~w~~~ 301 (303)
|.+||+.
T Consensus 390 v~~~d~~ 396 (695)
T 2bkl_A 390 IYKTSVS 396 (695)
T ss_dssp EEEEETT
T ss_pred EEEEECC
Confidence 9999874
No 183
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.52 E-value=1.1e-11 Score=103.84 Aligned_cols=164 Identities=19% Similarity=0.197 Sum_probs=117.0
Q ss_pred cCCEEEEEEeeCCCEEEEEeCC------------------------CcEEEEecCCceeeeeecCCCCccceEEEEEcCC
Q 048118 81 TKDVLSVAFSIDNRQIVSASRD------------------------RTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPN 136 (303)
Q Consensus 81 ~~~i~~i~~~~~~~~l~t~~~d------------------------~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 136 (303)
-+.+.+++++++|+++++...+ +.|.+||......... ....+-.....++++|+
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~-~~~~~~~~p~gia~d~~ 101 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQS-SGKNLFYLPHGLSIDTD 101 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEE-ECTTTCSSEEEEEECTT
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEec-cCCCccCCceEEEECCC
Confidence 3578899999999988888777 3689999753322211 12233345788999998
Q ss_pred CCCCEEEEEeCCCcEEEEECCCce-eEEEE---------cCCCCCeeEEEECC-CCCEEEEEe-CCCeEEEEeCCCCceE
Q 048118 137 TLQPTIVSASWDRTVKVWNLSNCK-LRATL---------AGHTGYVNTVAVSP-DGSLCASGG-KDGVILLWDLAEGKRL 204 (303)
Q Consensus 137 ~~~~~~~~~~~dg~i~iwd~~~~~-~~~~~---------~~~~~~i~~~~~~~-~~~~l~~~~-~d~~v~iwd~~~~~~~ 204 (303)
+ ..+++...++.|+.||..... ....+ ..+......++++| +++++++.+ .+++|++|| ..++.+
T Consensus 102 g--~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~ 178 (329)
T 3fvz_A 102 G--NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFV 178 (329)
T ss_dssp S--CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEE
T ss_pred C--CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEE
Confidence 6 367777788999999986542 44444 23444688999999 788888886 699999999 556666
Q ss_pred EEecC-C----------CeEEEEEEcCC-CeEEEEE-cCCcEEEEeCCCCceeeeee
Q 048118 205 YSLDA-G----------AVIHALCFSPN-RYWLCAA-TEQSIKIWDLESKSIVEDLK 248 (303)
Q Consensus 205 ~~~~~-~----------~~v~~~~~s~~-~~~l~~~-~~~~i~iwd~~~~~~~~~~~ 248 (303)
..+.. . .....++++|+ +.++++. .++.|++||.++++.+..+.
T Consensus 179 ~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~ 235 (329)
T 3fvz_A 179 TQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIK 235 (329)
T ss_dssp EEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEC
T ss_pred EEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEe
Confidence 55531 1 23788999998 6665554 57789999998787776553
No 184
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.50 E-value=2.4e-11 Score=103.05 Aligned_cols=190 Identities=15% Similarity=0.141 Sum_probs=112.9
Q ss_pred EEEEeeCCCEEEEEe----------CCCcEEEEecCCcee-eeeecCCC---CccceEEEEEcCCCCCCEEEEEeC--CC
Q 048118 86 SVAFSIDNRQIVSAS----------RDRTIKLWNTLGECK-YTIQEGDA---HTEWVSCVRFSPNTLQPTIVSASW--DR 149 (303)
Q Consensus 86 ~i~~~~~~~~l~t~~----------~d~~i~vw~~~~~~~-~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~--dg 149 (303)
.++|+|++++++++. .++.|.+||...... ..+..... +......++++|++. .++++.. ++
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~--~l~v~n~~~~~ 131 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGK--FIVLQNASPAT 131 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSS--EEEEEEESSSE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCC--EEEEECCCCCC
Confidence 789999999988876 367899999754222 22221111 112345688999873 4555543 68
Q ss_pred cEEEEECCCceeEEE-EcCCCCCeeEEEECCCC-CEEEEEeCCCeEEEEeCCC-CceE----------------------
Q 048118 150 TVKVWNLSNCKLRAT-LAGHTGYVNTVAVSPDG-SLCASGGKDGVILLWDLAE-GKRL---------------------- 204 (303)
Q Consensus 150 ~i~iwd~~~~~~~~~-~~~~~~~i~~~~~~~~~-~~l~~~~~d~~v~iwd~~~-~~~~---------------------- 204 (303)
.|.+||+.+++.... +.. .....+.+.|++ ..+++.+.||++.+|++.. ++..
T Consensus 132 ~v~v~d~~~~~~~~~~i~~--~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (361)
T 2oiz_A 132 SIGIVDVAKGDYVEDVTAA--AGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPAL 209 (361)
T ss_dssp EEEEEETTTTEEEEEEGGG--TTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEE
T ss_pred eEEEEECCCCcEEEEEecC--CCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecc
Confidence 999999999887766 432 112223344433 3344444455554444432 1111
Q ss_pred ---------------------------EEecCC-----------CeEEEEEEcCCCeEEEE-Ec-----------CCcEE
Q 048118 205 ---------------------------YSLDAG-----------AVIHALCFSPNRYWLCA-AT-----------EQSIK 234 (303)
Q Consensus 205 ---------------------------~~~~~~-----------~~v~~~~~s~~~~~l~~-~~-----------~~~i~ 234 (303)
..+... .....++|+|++..+.+ .. .+.|.
T Consensus 210 ~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~ 289 (361)
T 2oiz_A 210 DKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIW 289 (361)
T ss_dssp CSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEE
T ss_pred cCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEE
Confidence 000000 00011577887544333 22 24788
Q ss_pred EEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEeccc
Q 048118 235 IWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIGR 302 (303)
Q Consensus 235 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~~ 302 (303)
+||+++++.+..+... . +..++|+|||++|++++. +.|.+||...
T Consensus 290 viD~~t~~~v~~i~~~--------------------~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t 334 (361)
T 2oiz_A 290 VMDTKTKQRVARIPGR--------------------D--ALSMTIDQQRNLMLTLDG-GNVNVYDISQ 334 (361)
T ss_dssp EEETTTTEEEEEEECT--------------------T--CCEEEEETTTTEEEEECS-SCEEEEECSS
T ss_pred EEECCCCcEEEEEecC--------------------C--eeEEEECCCCCEEEEeCC-CeEEEEECCC
Confidence 9998888877665431 1 367899999999998887 9999999753
No 185
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.48 E-value=6.8e-10 Score=90.88 Aligned_cols=240 Identities=13% Similarity=0.064 Sum_probs=158.8
Q ss_pred ccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEe
Q 048118 11 MRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFS 90 (303)
Q Consensus 11 ~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~ 90 (303)
+..+...+.++++++++ .++++...++.|..|+.. .... . +.. ..+...+..++++
T Consensus 10 ~~~~~~~~~~i~~d~~g-~l~v~~~~~~~v~~~d~~-~~~~----~------------~~~------~~~~~~~~~i~~~ 65 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKG-KVWITQHKANMISCINLD-GKIT----E------------YPL------PTPDAKVMCLTIS 65 (299)
T ss_dssp CCSSSCCEEEEEECTTS-CEEEEETTTTEEEEECTT-CCEE----E------------EEC------SSTTCCEEEEEEC
T ss_pred CCCcCCCccceEECCCC-CEEEEecCCCcEEEEcCC-CCeE----E------------ecC------CcccCceeeEEEC
Confidence 44455678999999765 577777668899999865 2110 0 000 0123567889999
Q ss_pred eCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEE-EEcCCC
Q 048118 91 IDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRA-TLAGHT 169 (303)
Q Consensus 91 ~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~-~~~~~~ 169 (303)
+++.++++...++.|..|+..+... ... .......+.++++++++ ..+++...++.|..||. +++... ......
T Consensus 66 ~~g~l~v~~~~~~~i~~~~~~g~~~-~~~-~~~~~~~~~~i~~~~~g--~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~ 140 (299)
T 2z2n_A 66 SDGEVWFTENAANKIGRITKKGIIK-EYT-LPNPDSAPYGITEGPNG--DIWFTEMNGNRIGRITD-DGKIREYELPNKG 140 (299)
T ss_dssp TTSCEEEEETTTTEEEEECTTSCEE-EEE-CSSTTCCEEEEEECTTS--CEEEEETTTTEEEEECT-TCCEEEEECSSTT
T ss_pred CCCCEEEeCCCCCeEEEECCCCcEE-EEe-CCCcCCCceeeEECCCC--CEEEEecCCceEEEECC-CCCEEEecCCCCC
Confidence 9998888777788899998754321 111 11123457889998875 35565556789999998 544332 223344
Q ss_pred CCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEE-ec-CCCeEEEEEEcCCCeEEEEE-cCCcEEEEeCCCCceeee
Q 048118 170 GYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYS-LD-AGAVIHALCFSPNRYWLCAA-TEQSIKIWDLESKSIVED 246 (303)
Q Consensus 170 ~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~-~~-~~~~v~~~~~s~~~~~l~~~-~~~~i~iwd~~~~~~~~~ 246 (303)
..+..+++.++++.+++...++.|..||. +++.... .. ....+..+++++++.+.++. .++.|.+||. +++...
T Consensus 141 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~- 217 (299)
T 2z2n_A 141 SYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITE- 217 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-
T ss_pred CCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEE-
Confidence 56889999999988887777889999998 5554332 22 23467889999988755554 4678999998 554321
Q ss_pred eeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEec
Q 048118 247 LKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 300 (303)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~ 300 (303)
+.. ......+..+++.++|...++...++.|..||.
T Consensus 218 ~~~------------------~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 218 FKI------------------PTPNARPHAITAGAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp EEC------------------SSTTCCEEEEEECSTTCEEEEETTTTEEEEEET
T ss_pred EEC------------------CCCCCCceeEEECCCCCEEEeccCCceEEEECC
Confidence 111 011223567889999887776667888888875
No 186
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.47 E-value=3e-11 Score=101.46 Aligned_cols=219 Identities=13% Similarity=0.146 Sum_probs=129.7
Q ss_pred ceeeeecCCCCCcEEEEecCC---Cc--EEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEee
Q 048118 17 MVTAIATPIDNSDMIVTASRD---KS--IIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSI 91 (303)
Q Consensus 17 ~v~~v~~~~~~~~~~~t~s~d---~~--i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~ 91 (303)
.+..+.|+|++. +|+.++.+ +. |.+|++...+. .. +..+.. +..++|+|
T Consensus 60 ~~~~~~~SpDg~-~la~~~~~~~~~~~~l~~~~~~~g~~-----~~-------------------l~~~~~-~~~~~wsp 113 (347)
T 2gop_A 60 NATMPRISPDGK-KIAFMRANEEKKVSEIWVADLETLSS-----KK-------------------ILEAKN-IRSLEWNE 113 (347)
T ss_dssp SCEEEEECTTSS-EEEEEEEETTTTEEEEEEEETTTTEE-----EE-------------------EEEESE-EEEEEECT
T ss_pred cCCCeEECCCCC-EEEEEEeccCCCcceEEEEECCCCce-----EE-------------------EEcCCC-ccceeECC
Confidence 466789999864 66666543 34 55555543211 10 111223 77889999
Q ss_pred CCCEEEEEeCC---------------------------CcEEEEecCCcee-eeeecCCCCccceEEEEEcCCCCCCEEE
Q 048118 92 DNRQIVSASRD---------------------------RTIKLWNTLGECK-YTIQEGDAHTEWVSCVRFSPNTLQPTIV 143 (303)
Q Consensus 92 ~~~~l~t~~~d---------------------------~~i~vw~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 143 (303)
+|+.|+.++.+ ..|.+|++.+... ..+.. . .+..+.|+|++ .++
T Consensus 114 dg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~----~-~~~~~~~spdg---~~~ 185 (347)
T 2gop_A 114 DSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK----P-RFSSGIWHRDK---IVV 185 (347)
T ss_dssp TSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE----E-TTCEEEEETTE---EEE
T ss_pred CCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC----C-CcccccCCCCe---EEE
Confidence 99988877642 4688888865433 23322 1 46788999986 455
Q ss_pred EEeCCC-------cEEEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEeCC--------CeEEEEeCCCCceEEEec
Q 048118 144 SASWDR-------TVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKD--------GVILLWDLAEGKRLYSLD 208 (303)
Q Consensus 144 ~~~~dg-------~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--------~~v~iwd~~~~~~~~~~~ 208 (303)
++..++ ...+|.+.+++.. .+..+ ..+..+ +|+|+.|+.++.+ ..|.+|| +++......
T Consensus 186 ~~~~~~~~~~~~~~~~l~~~d~~~~~-~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~ 259 (347)
T 2gop_A 186 NVPHREIIPQYFKFWDIYIWEDGKEE-KMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILD 259 (347)
T ss_dssp EEECCCSSCCSSCCEEEEEEETTEEE-EEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESST
T ss_pred EEecccccccccccccEEEeCCCceE-EeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccc
Confidence 554432 3344433354433 33333 445444 8999988777644 4788888 444332222
Q ss_pred -CCCeEEE-EEEcCCCeEEEEEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEE
Q 048118 209 -AGAVIHA-LCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTL 286 (303)
Q Consensus 209 -~~~~v~~-~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l 286 (303)
....+.. +.|+ ++.++++..++.+++| +.+++... +. .....+.+++|+| ..+
T Consensus 260 ~~~~~~~~~~~~s-dg~~~~~~~~~~~~l~-~~~g~~~~-~~--------------------~~~~~v~~~~~s~--~~~ 314 (347)
T 2gop_A 260 EVDRGVGQAKIKD-GKVYFTLFEEGSVNLY-IWDGEIKP-IA--------------------KGRHWIMGFDVDE--IVV 314 (347)
T ss_dssp TCCSEEEEEEEET-TEEEEEEEETTEEEEE-EESSSEEE-EE--------------------CSSSEEEEEEESS--SEE
T ss_pred cCCcccCCccEEc-CcEEEEEecCCcEEEE-EcCCceEE-Ee--------------------cCCCeEEeeeeeC--cEE
Confidence 2456775 8999 8833445567889998 76443211 10 0122456788999 677
Q ss_pred EEeecCCeE-EEEec
Q 048118 287 FSGYTDGVI-RVWGI 300 (303)
Q Consensus 287 ~~gs~Dg~v-~~w~~ 300 (303)
++++.++.. ++|.+
T Consensus 315 ~~~~~~~~~~~l~~~ 329 (347)
T 2gop_A 315 YLKETATRLRELFTW 329 (347)
T ss_dssp EEEECSSSCCEEEEE
T ss_pred EEEcCCCChHHheEe
Confidence 787777765 77754
No 187
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.45 E-value=3.6e-11 Score=101.00 Aligned_cols=182 Identities=9% Similarity=0.117 Sum_probs=111.6
Q ss_pred CEEEEEEeeCCCEEEEEeCC---Cc--EEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeC----------
Q 048118 83 DVLSVAFSIDNRQIVSASRD---RT--IKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASW---------- 147 (303)
Q Consensus 83 ~i~~i~~~~~~~~l~t~~~d---~~--i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~---------- 147 (303)
.+..++|+|+|++|+..+.+ +. |.+|++.+.....+.. ... +..++|+|++. .++.++.
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~---~~~-~~~~~wspdg~--~l~~~~~~~~~~~~~~~ 133 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILE---AKN-IRSLEWNEDSR--KLLIVGFKRREDEDFIF 133 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEE---ESE-EEEEEECTTSS--EEEEEEECCCC------
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEc---CCC-ccceeECCCCC--EEEEEEccCCCcCCcEE
Confidence 45678999999998877654 33 6667765543333322 122 88899999873 4555442
Q ss_pred -----------------CCcEEEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCC-------eEEEEeCCCCce
Q 048118 148 -----------------DRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDG-------VILLWDLAEGKR 203 (303)
Q Consensus 148 -----------------dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~-------~v~iwd~~~~~~ 203 (303)
...|.+||+.+++....+.. . .+..+.|+|+| +++++..+. ...+|.+.+++.
T Consensus 134 ~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~ 210 (347)
T 2gop_A 134 EDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE 210 (347)
T ss_dssp ---CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE
T ss_pred EcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce
Confidence 24688999988876344444 3 78899999999 777775542 334444334433
Q ss_pred EEEecCCCeEEEEEEcCCCeEEEEEc-C--------CcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeE
Q 048118 204 LYSLDAGAVIHALCFSPNRYWLCAAT-E--------QSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYC 274 (303)
Q Consensus 204 ~~~~~~~~~v~~~~~s~~~~~l~~~~-~--------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (303)
..+.....+.. ++|+|..++... + ..|++|| +++... +. ..+...+
T Consensus 211 -~~l~~~~~~~~--~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~-l~-------------------~~~~~~~ 265 (347)
T 2gop_A 211 -EKMFEKVSFYA--VDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMG-IL-------------------DEVDRGV 265 (347)
T ss_dssp -EEEEEEESEEE--EEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEE-SS-------------------TTCCSEE
T ss_pred -EEeccCcceee--ECCCCCEEEEEEccccCCccccceEEEEC--CCceEe-cc-------------------ccCCccc
Confidence 22211123333 389987554432 2 3688888 433221 10 1111223
Q ss_pred EE-EEEcCCCCEEEEeecCCeEEEEecc
Q 048118 275 TS-LNWSVDGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 275 ~~-~~~sp~~~~l~~gs~Dg~v~~w~~~ 301 (303)
.. +.|+ ++ ++++++.|+.+++| +.
T Consensus 266 ~~~~~~s-dg-~~~~~~~~~~~~l~-~~ 290 (347)
T 2gop_A 266 GQAKIKD-GK-VYFTLFEEGSVNLY-IW 290 (347)
T ss_dssp EEEEEET-TE-EEEEEEETTEEEEE-EE
T ss_pred CCccEEc-Cc-EEEEEecCCcEEEE-Ec
Confidence 43 7899 88 99999999999999 74
No 188
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.44 E-value=2.5e-11 Score=111.75 Aligned_cols=198 Identities=10% Similarity=0.008 Sum_probs=124.2
Q ss_pred cccCCEEEEEEeeCCCEEE-----EEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCc---
Q 048118 79 GHTKDVLSVAFSIDNRQIV-----SASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRT--- 150 (303)
Q Consensus 79 ~h~~~i~~i~~~~~~~~l~-----t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~--- 150 (303)
+|...+..++|+|+|++|+ .|+.+..|++||+.+.......... ......++|+|++ ..|+.++.+..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~--~~~~~~~~wspDg--~~l~~~~~d~~~~~ 193 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIE--GGKYATPKWTPDS--KGFYYEWLPTDPSI 193 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBS--CCTTCCCEECTTS--SEEEEEECCCCTTS
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccC--cccccceEEecCC--CEEEEEEecCCCCC
Confidence 4555688899999999988 4455678999998664332000000 1111568899987 36777777665
Q ss_pred ----------EEEEECCCce----eEEEEcCCCCCeeEEEECCCCCEEEEEeCCC----eEEEEeCCCCceEEEecCCCe
Q 048118 151 ----------VKVWNLSNCK----LRATLAGHTGYVNTVAVSPDGSLCASGGKDG----VILLWDLAEGKRLYSLDAGAV 212 (303)
Q Consensus 151 ----------i~iwd~~~~~----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~----~v~iwd~~~~~~~~~~~~~~~ 212 (303)
|++|++.+++ ++.....+...+..+.|+|+|++|+.++.++ .|.+||..+++..........
T Consensus 194 ~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~ 273 (695)
T 2bkl_A 194 KVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGA 273 (695)
T ss_dssp CGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSC
T ss_pred ccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCc
Confidence 9999998765 2333334556788999999999988777665 677777655543222222223
Q ss_pred EEEEEEcCCCeEEEEEc----CCcEEEEeCCCCce--eeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEE
Q 048118 213 IHALCFSPNRYWLCAAT----EQSIKIWDLESKSI--VEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTL 286 (303)
Q Consensus 213 v~~~~~s~~~~~l~~~~----~~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l 286 (303)
+....+ +++.+++.+. ++.|++||+++++. ...+.. ......+..++|+ ++.++
T Consensus 274 ~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~------------------~~~~~~l~~~~~~-~~~lv 333 (695)
T 2bkl_A 274 KYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVP------------------EDSSASLLSVSIV-GGHLS 333 (695)
T ss_dssp CEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEEC------------------CCSSCEEEEEEEE-TTEEE
T ss_pred eEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEec------------------CCCCCeEEEEEEE-CCEEE
Confidence 344445 4544444443 47899999876532 011100 0001234556777 66788
Q ss_pred EEeecCCeEEEEec
Q 048118 287 FSGYTDGVIRVWGI 300 (303)
Q Consensus 287 ~~gs~Dg~v~~w~~ 300 (303)
++...|+..++|.+
T Consensus 334 ~~~~~dg~~~l~~~ 347 (695)
T 2bkl_A 334 LEYLKDATSEVRVA 347 (695)
T ss_dssp EEEEETTEEEEEEE
T ss_pred EEEEECCEEEEEEE
Confidence 89999999998865
No 189
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.43 E-value=5e-12 Score=107.12 Aligned_cols=180 Identities=9% Similarity=0.001 Sum_probs=126.8
Q ss_pred CEEEEEEeeCCCEEEEEeCCCcEEEEecCCcee--------eeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEE
Q 048118 83 DVLSVAFSIDNRQIVSASRDRTIKLWNTLGECK--------YTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVW 154 (303)
Q Consensus 83 ~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~--------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iw 154 (303)
+++.+++++...++++|+.++ +++|++..... ........... |..++| ++ ..++++ .++.|++|
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~--~~L~v~-~~~~l~v~ 111 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HG--DQVLVS-TRNALYSL 111 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ET--TEEEEE-ESSEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CC--CEEEEE-cCCcEEEE
Confidence 578899999999999999975 66698532110 00000012334 899999 43 466666 88999999
Q ss_pred ECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEecCCCeEEEEEEcCCCeEEEEEcCCcEE
Q 048118 155 NLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAATEQSIK 234 (303)
Q Consensus 155 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~i~ 234 (303)
|+.+.........|...+.++.+.+. .+++++.||.+.+||+.+++... ....|.+++|||+| ++++..||.++
T Consensus 112 dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~---~~~~Vs~v~WSpkG-~~vg~~dg~i~ 185 (388)
T 1xip_A 112 DLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ---LAQNVTSFDVTNSQ-LAVLLKDRSFQ 185 (388)
T ss_dssp ESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE---EEESEEEEEECSSE-EEEEETTSCEE
T ss_pred EchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc---ccCCceEEEEcCCc-eEEEEcCCcEE
Confidence 99776555556667778888877654 38889999999999999776543 23579999999999 56778899999
Q ss_pred EEeCCCCce--eeeeeeccccccccccCccceeecc---ccceeEEEEEEcCCCCEEEEe
Q 048118 235 IWDLESKSI--VEDLKVDLKTEAEKSEATTATTTIK---KKNIYCTSLNWSVDGSTLFSG 289 (303)
Q Consensus 235 iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~sp~~~~l~~g 289 (303)
+|+.+.++. ...+... + .+. ++...+.++.|.+++.++++-
T Consensus 186 ~~~~~~~~~~~k~~I~~P--p------------~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 186 SFAWRNGEMEKQFEFSLP--S------------ELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp EEEEETTEEEEEEEECCC--H------------HHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred EEcCCCccccccceecCC--c------------ccccccCCCeeEEEEEEecCCeEEEEE
Confidence 999877664 3333211 0 011 234667889999988887763
No 190
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.42 E-value=5.3e-10 Score=92.38 Aligned_cols=240 Identities=10% Similarity=0.075 Sum_probs=146.9
Q ss_pred cceeeeecCCCCCcEEEE-------ecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEE
Q 048118 16 DMVTAIATPIDNSDMIVT-------ASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVA 88 (303)
Q Consensus 16 ~~v~~v~~~~~~~~~~~t-------~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~ 88 (303)
....+++|++++ .++++ +..++.|..|+....... .+ .. + ...++...+..++
T Consensus 18 ~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~------~~----------~~-~--~~~~~~~~~~~i~ 77 (314)
T 1pjx_A 18 PGAEGPVFDKNG-DFYIVAPEVEVNGKPAGEILRIDLKTGKKT------VI----------CK-P--EVNGYGGIPAGCQ 77 (314)
T ss_dssp TTCEEEEECTTS-CEEEEETTCEETTEECCEEEEECTTTCCEE------EE----------EC-C--EETTEECCEEEEE
T ss_pred CCccCceECCCC-CEEEEEeccccCCCCCCEEEEEeCCCCcEE------EE----------Ee-c--ccCCCCCCCceEE
Confidence 345688888654 67777 567889999986533211 00 00 0 0012345688999
Q ss_pred EeeC-CCEEEEEeCCCcEEEEecCCceeeee-ecC--CCCccceEEEEEcCCCCCCEEEEEeCC---------------C
Q 048118 89 FSID-NRQIVSASRDRTIKLWNTLGECKYTI-QEG--DAHTEWVSCVRFSPNTLQPTIVSASWD---------------R 149 (303)
Q Consensus 89 ~~~~-~~~l~t~~~d~~i~vw~~~~~~~~~~-~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~d---------------g 149 (303)
++++ +.++++. ..+.|.+|+..+.. ... ... ......+.++++++++ ...++...+ +
T Consensus 78 ~~~~~g~l~v~~-~~~~l~~~d~~g~~-~~~~~~~~~~~~~~~~~~i~~d~~g--~l~v~~~~~~~~~~~~~~~~~~~~~ 153 (314)
T 1pjx_A 78 CDRDANQLFVAD-MRLGLLVVQTDGTF-EEIAKKDSEGRRMQGCNDCAFDYEG--NLWITAPAGEVAPADYTRSMQEKFG 153 (314)
T ss_dssp ECSSSSEEEEEE-TTTEEEEEETTSCE-EECCSBCTTSCBCBCCCEEEECTTS--CEEEEECBCBCTTSCCCBTTSSSCE
T ss_pred EecCCCcEEEEE-CCCCEEEEeCCCCE-EEEEeccCCCccccCCcCEEECCCC--CEEEEecCcccccccccccccCCCC
Confidence 9999 6655544 34478889876322 211 111 1112347789999876 344544433 4
Q ss_pred cEEEEECCCceeEEEEcCCCCCeeEEEEC----CCCCEEEEE-eCCCeEEEEeCC-CCc-----eEEEecCC--CeEEEE
Q 048118 150 TVKVWNLSNCKLRATLAGHTGYVNTVAVS----PDGSLCASG-GKDGVILLWDLA-EGK-----RLYSLDAG--AVIHAL 216 (303)
Q Consensus 150 ~i~iwd~~~~~~~~~~~~~~~~i~~~~~~----~~~~~l~~~-~~d~~v~iwd~~-~~~-----~~~~~~~~--~~v~~~ 216 (303)
.|..||.. ++.... ..+......++++ |+++.+..+ ..++.|.+||+. .++ ....+... .....+
T Consensus 154 ~l~~~~~~-g~~~~~-~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i 231 (314)
T 1pjx_A 154 SIYCFTTD-GQMIQV-DTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGM 231 (314)
T ss_dssp EEEEECTT-SCEEEE-EEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEE
T ss_pred eEEEECCC-CCEEEe-ccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCce
Confidence 67777765 443332 2233456788999 998765444 568899999986 343 12222222 567889
Q ss_pred EEcCCCeEEEEE-cCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEE-EEeecCCe
Q 048118 217 CFSPNRYWLCAA-TEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTL-FSGYTDGV 294 (303)
Q Consensus 217 ~~s~~~~~l~~~-~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l-~~gs~Dg~ 294 (303)
++++++.+.++. .++.|.+||.++++.+..+.. ....+.+++|+|+++.| ++...++.
T Consensus 232 ~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~--------------------~~~~~~~i~~~~dg~~l~v~~~~~~~ 291 (314)
T 1pjx_A 232 DFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRC--------------------PFEKPSNLHFKPQTKTIFVTEHENNA 291 (314)
T ss_dssp EEBTTCCEEEEEETTTEEEEECTTCBSCSEEEEC--------------------SSSCEEEEEECTTSSEEEEEETTTTE
T ss_pred EECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeC--------------------CCCCceeEEECCCCCEEEEEeCCCCe
Confidence 999998765554 678999999886655433221 11235678899999954 55566789
Q ss_pred EEEEecc
Q 048118 295 IRVWGIG 301 (303)
Q Consensus 295 v~~w~~~ 301 (303)
|..|++.
T Consensus 292 l~~~~~~ 298 (314)
T 1pjx_A 292 VWKFEWQ 298 (314)
T ss_dssp EEEEECS
T ss_pred EEEEeCC
Confidence 9999864
No 191
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.40 E-value=1.8e-11 Score=103.69 Aligned_cols=180 Identities=12% Similarity=0.081 Sum_probs=124.1
Q ss_pred ceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEeeCCCEE
Q 048118 17 MVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSIDNRQI 96 (303)
Q Consensus 17 ~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~~~~~l 96 (303)
.++.+++++.. +++++|+.+ .+++|++....+........ +.+ .....+.+ |+.++| ++.+|
T Consensus 39 ~~nlLais~~~-gll~a~~~~-~l~v~~~~~l~~~~~~~~~~------------~~~-~~~~~lp~-V~~l~f--d~~~L 100 (388)
T 1xip_A 39 SLQNLDISNSK-SLFVAASGS-KAVVGELQLLRDHITSDSTP------------LTF-KWEKEIPD-VIFVCF--HGDQV 100 (388)
T ss_dssp CCBCEEEETTT-TEEEEEETT-EEEEEEHHHHHHHHHSSSCC------------CCC-SEEEECTT-EEEEEE--ETTEE
T ss_pred cccEEEEcCCC-CEEEEeCCC-EEEEEEhhHhhhhhcccccc------------ccc-eEEeeCCC-eeEEEE--CCCEE
Confidence 47888888764 678888887 56669976432111000000 000 01123455 899999 88899
Q ss_pred EEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEEEcCCCCCeeEEE
Q 048118 97 VSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVA 176 (303)
Q Consensus 97 ~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~ 176 (303)
+++ .++.|++||.......... ..+...+.++.+.+. .++.++.||.+.+||++++.... +...|++++
T Consensus 101 ~v~-~~~~l~v~dv~sl~~~~~~--~~~~~~v~~i~~~~p----~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~ 169 (388)
T 1xip_A 101 LVS-TRNALYSLDLEELSEFRTV--TSFEKPVFQLKNVNN----TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFD 169 (388)
T ss_dssp EEE-ESSEEEEEESSSTTCEEEE--EECSSCEEEEEECSS----EEEEEETTSEEEEEETTTCCEEE----EEESEEEEE
T ss_pred EEE-cCCcEEEEEchhhhccCcc--ceeecceeeEEecCC----CEEEEECCCCEEEEEccCCcccc----ccCCceEEE
Confidence 888 8899999997543221111 123445777776653 37888999999999998776543 346899999
Q ss_pred ECCCCCEEEEEeCCCeEEEEeCCCCce--EEEe------c----CCCeEEEEEEcCCCeEEEE
Q 048118 177 VSPDGSLCASGGKDGVILLWDLAEGKR--LYSL------D----AGAVIHALCFSPNRYWLCA 227 (303)
Q Consensus 177 ~~~~~~~l~~~~~d~~v~iwd~~~~~~--~~~~------~----~~~~v~~~~~s~~~~~l~~ 227 (303)
|||.| ++.|..||++++|+...++. ..++ . ....|.+++|.+++.++++
T Consensus 170 WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 170 VTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp ECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 99999 67899999999998877664 4455 1 3578999999999887765
No 192
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.39 E-value=2.7e-09 Score=95.45 Aligned_cols=228 Identities=13% Similarity=0.079 Sum_probs=150.7
Q ss_pred CcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEeeCCCEEEEEeCCCcEEE
Q 048118 28 SDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSIDNRQIVSASRDRTIKL 107 (303)
Q Consensus 28 ~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~~~~~l~t~~~d~~i~v 107 (303)
..++++...+++|.++|....+.. ..+ .....+..+.++|+|+++++++.|+.|.+
T Consensus 167 ~~~~V~~~~~~~V~viD~~t~~v~-----~~i-------------------~~g~~p~~v~~SpDGr~lyv~~~dg~V~v 222 (567)
T 1qks_A 167 NLFSVTLRDAGQIALIDGSTYEIK-----TVL-------------------DTGYAVHISRLSASGRYLFVIGRDGKVNM 222 (567)
T ss_dssp GEEEEEETTTTEEEEEETTTCCEE-----EEE-------------------ECSSCEEEEEECTTSCEEEEEETTSEEEE
T ss_pred ceEEEEeCCCCeEEEEECCCCeEE-----EEE-------------------eCCCCccceEECCCCCEEEEEcCCCeEEE
Confidence 357788888999999998654321 111 01224568999999999999999999999
Q ss_pred EecC--Cc-eeeeeecCCCCccceEEEEEc----CCCCCCEEEEEeCCCcEEEEECCCceeEEEEcC----------C-C
Q 048118 108 WNTL--GE-CKYTIQEGDAHTEWVSCVRFS----PNTLQPTIVSASWDRTVKVWNLSNCKLRATLAG----------H-T 169 (303)
Q Consensus 108 w~~~--~~-~~~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~----------~-~ 169 (303)
||+. .. ....+. .. .....+.|+ |++. ..+++...++.+.++|..+.+.+..+.- | .
T Consensus 223 iD~~~~t~~~v~~i~---~G-~~P~~ia~s~~~~pDGk-~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~ 297 (567)
T 1qks_A 223 IDLWMKEPTTVAEIK---IG-SEARSIETSKMEGWEDK-YAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPE 297 (567)
T ss_dssp EETTSSSCCEEEEEE---CC-SEEEEEEECCSTTCTTT-EEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESC
T ss_pred EECCCCCCcEeEEEe---cC-CCCceeEEccccCCCCC-EEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCC
Confidence 9984 22 222222 11 124688999 5763 3455566679999999988887766542 1 1
Q ss_pred CCeeEEEECCCCCEEE-EEeCCCeEEEEeCCCCc--eEEEecCCCeEEEEEEcCCCeEEEEE--cCCcEEEEeCCCCcee
Q 048118 170 GYVNTVAVSPDGSLCA-SGGKDGVILLWDLAEGK--RLYSLDAGAVIHALCFSPNRYWLCAA--TEQSIKIWDLESKSIV 244 (303)
Q Consensus 170 ~~i~~~~~~~~~~~l~-~~~~d~~v~iwd~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~--~~~~i~iwd~~~~~~~ 244 (303)
..+..+..++++..++ ....+|+|.++|....+ .+..+......+.+.|+|++.++.++ .++.|.++|+++++++
T Consensus 298 ~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~ 377 (567)
T 1qks_A 298 PRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLV 377 (567)
T ss_dssp CCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEE
T ss_pred CceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEE
Confidence 2577888888876554 44567999999987653 23345556677889999998765443 4689999999999877
Q ss_pred eeeee-ccccccccccCccceeeccccceeEEEEEEcCCCC-EEEEee-cCCeEEEEecc
Q 048118 245 EDLKV-DLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGS-TLFSGY-TDGVIRVWGIG 301 (303)
Q Consensus 245 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~-~l~~gs-~Dg~v~~w~~~ 301 (303)
..+.+ ...+ |...-..+ ++|++. ..+++. .++.|.++|..
T Consensus 378 ~~i~vgg~~P----------------hpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~ 420 (567)
T 1qks_A 378 AIEDTGGQTP----------------HPGRGANF-VHPTFGPVWATSHMGDDSVALIGTD 420 (567)
T ss_dssp EEEECSSSSB----------------CCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECC
T ss_pred EEEeccCcCC----------------CCccceee-ECCCCCcEEEeCCCCCCeEEEecCC
Confidence 65543 1110 00000111 478754 444443 56899999875
No 193
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.39 E-value=7.3e-10 Score=92.57 Aligned_cols=190 Identities=13% Similarity=0.077 Sum_probs=129.8
Q ss_pred CEEEEEEeeCCCEEEEEeCCCcEEEEecCCcee-eeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCcee
Q 048118 83 DVLSVAFSIDNRQIVSASRDRTIKLWNTLGECK-YTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKL 161 (303)
Q Consensus 83 ~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~ 161 (303)
....+.+. .+.++++...++.|.+||...... ..+. .......+++++++ ...++...++.|.+||..+++.
T Consensus 45 ~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~----~~~~p~~i~~~~~g--~lyv~~~~~~~v~~iD~~t~~~ 117 (328)
T 3dsm_A 45 VAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT----GFTSPRYIHFLSDE--KAYVTQIWDYRIFIINPKTYEI 117 (328)
T ss_dssp CEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE----CCSSEEEEEEEETT--EEEEEEBSCSEEEEEETTTTEE
T ss_pred cceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC----CCCCCcEEEEeCCC--eEEEEECCCCeEEEEECCCCeE
Confidence 34566664 455666666789999999864332 2221 12346788888775 2344444789999999999887
Q ss_pred EEEEcCCC-----CCeeEEEECCCCCEEEEEe-CCCeEEEEeCCCCceEEEecCCCeEEEEEEcCCCeEEEEEcC-----
Q 048118 162 RATLAGHT-----GYVNTVAVSPDGSLCASGG-KDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAATE----- 230 (303)
Q Consensus 162 ~~~~~~~~-----~~i~~~~~~~~~~~l~~~~-~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----- 230 (303)
...+.... .....+++ .+++.+++.. .+++|.++|+.+++.+.++........++++|++.+++++..
T Consensus 118 ~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~ 196 (328)
T 3dsm_A 118 TGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGS 196 (328)
T ss_dssp EEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTC
T ss_pred EEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCC
Confidence 76665432 13456677 3444444443 489999999999988887766666678899999886666542
Q ss_pred ------CcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEecc
Q 048118 231 ------QSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 231 ------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~ 301 (303)
+.|.++|.+++++...+.+.. ......++++|++++|.++.. .|.+||+.
T Consensus 197 ~~~~~~~~v~~id~~t~~v~~~~~~~~-------------------g~~p~~la~~~d~~~lyv~~~--~v~~~d~~ 252 (328)
T 3dsm_A 197 PYGYEAPSLYRIDAETFTVEKQFKFKL-------------------GDWPSEVQLNGTRDTLYWINN--DIWRMPVE 252 (328)
T ss_dssp SSCBCCCEEEEEETTTTEEEEEEECCT-------------------TCCCEEEEECTTSCEEEEESS--SEEEEETT
T ss_pred ccccCCceEEEEECCCCeEEEEEecCC-------------------CCCceeEEEecCCCEEEEEcc--EEEEEECC
Confidence 689999999888765543211 012367899999998887765 88888874
No 194
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.38 E-value=2.5e-10 Score=105.86 Aligned_cols=240 Identities=10% Similarity=0.008 Sum_probs=138.6
Q ss_pred cccceeeeecCCCCCcEEEEecCC-----CcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEE
Q 048118 14 HTDMVTAIATPIDNSDMIVTASRD-----KSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVA 88 (303)
Q Consensus 14 h~~~v~~v~~~~~~~~~~~t~s~d-----~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~ 88 (303)
|...+..++|+|++. +||.++.+ .+|++||+..++.... . + +...+..++
T Consensus 161 ~~~~~~~~~~SPDG~-~la~~~~~~G~e~~~i~v~dl~tg~~~~~----~-------~-------------~~~~~~~~~ 215 (741)
T 1yr2_A 161 GATALDAWAASDDGR-LLAYSVQDGGSDWRTVKFVGVADGKPLAD----E-------L-------------KWVKFSGLA 215 (741)
T ss_dssp --EEEEEEEECTTSS-EEEEEEEETTCSEEEEEEEETTTCCEEEE----E-------E-------------EEEESCCCE
T ss_pred CCEEEEeEEECCCCC-EEEEEEcCCCCceEEEEEEECCCCCCCCc----c-------C-------------CCceeccEE
Confidence 434677889999864 56655443 3699999875432100 0 0 001123578
Q ss_pred EeeCCCEEEEEeCCCc--------------EEEEecCCcee--eeeecCCCCccceEEEEEcCCCCCCEEEEEeC-----
Q 048118 89 FSIDNRQIVSASRDRT--------------IKLWNTLGECK--YTIQEGDAHTEWVSCVRFSPNTLQPTIVSASW----- 147 (303)
Q Consensus 89 ~~~~~~~l~t~~~d~~--------------i~vw~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~----- 147 (303)
|+|+ +.|+.++.|+. |.+|++.+... ..+.....+...+..+.|+|++. .++..+.
T Consensus 216 wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~--~l~~~~~~~~~~ 292 (741)
T 1yr2_A 216 WLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGR--WVVITSSEGTDP 292 (741)
T ss_dssp ESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSC--EEEEEEECTTCS
T ss_pred EECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCC--EEEEEEEccCCC
Confidence 9999 88888776654 78888743321 12222222333578899999873 4544443
Q ss_pred CCcEEEEECCCc--eeEEEEcCCCCCeeEEEECCCCCEEEEEeC----CCeEEEEeCCCCc-eEEE-ec-CCCeEEEEEE
Q 048118 148 DRTVKVWNLSNC--KLRATLAGHTGYVNTVAVSPDGSLCASGGK----DGVILLWDLAEGK-RLYS-LD-AGAVIHALCF 218 (303)
Q Consensus 148 dg~i~iwd~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----d~~v~iwd~~~~~-~~~~-~~-~~~~v~~~~~ 218 (303)
...|++||+.++ +....+..+...+.... +|+|+.|+..+. .+.|.+||+.++. .... +. ....+..+++
T Consensus 293 ~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~ 371 (741)
T 1yr2_A 293 VNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGI 371 (741)
T ss_dssp CCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEE
T ss_pred cceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEE
Confidence 348999999776 31344555554555443 488988877765 3469999998742 2222 22 2345667788
Q ss_pred cCCCeEEEEEcCCcEEEEeCC-CCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEE----EeecCC
Q 048118 219 SPNRYWLCAATEQSIKIWDLE-SKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLF----SGYTDG 293 (303)
Q Consensus 219 s~~~~~l~~~~~~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~----~gs~Dg 293 (303)
+.+..++....++..++|.+. .++....+.. .....+..++++|+++.|+ +....+
T Consensus 372 ~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~-------------------~~~~~v~~~~~s~d~~~l~~~~ss~~~P~ 432 (741)
T 1yr2_A 372 AGNRLFASYIHDAKSQVLAFDLDGKPAGAVSL-------------------PGIGSASGLSGRPGDRHAYLSFSSFTQPA 432 (741)
T ss_dssp EBTEEEEEEEETTEEEEEEEETTSCEEEECBC-------------------SSSCEEEEEECCBTCSCEEEEEEETTEEE
T ss_pred ECCEEEEEEEECCEEEEEEEeCCCCceeeccC-------------------CCCeEEEEeecCCCCCEEEEEEcCCCCCC
Confidence 733334444557765555432 2333222211 0123456688899988665 233457
Q ss_pred eEEEEecc
Q 048118 294 VIRVWGIG 301 (303)
Q Consensus 294 ~v~~w~~~ 301 (303)
+|.+||+.
T Consensus 433 ~i~~~d~~ 440 (741)
T 1yr2_A 433 TVLALDPA 440 (741)
T ss_dssp EEEEEETT
T ss_pred EEEEEECC
Confidence 89999874
No 195
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.37 E-value=3.9e-10 Score=92.66 Aligned_cols=195 Identities=13% Similarity=0.034 Sum_probs=127.0
Q ss_pred ccCCEEEEEEeeCCC-EEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCC
Q 048118 80 HTKDVLSVAFSIDNR-QIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSN 158 (303)
Q Consensus 80 h~~~i~~i~~~~~~~-~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~ 158 (303)
+.....+++|+|++. +++++..++.|..|+..+. ..... .+...+.+++++|++ ..+++...++.|.+||..+
T Consensus 26 ~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~---~~~~~~~~l~~~~dg--~l~v~~~~~~~i~~~d~~~ 99 (296)
T 3e5z_A 26 GFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEM---HPSHHQNGHCLNKQG--HLIACSHGLRRLERQREPG 99 (296)
T ss_dssp CCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEE---SSCSSEEEEEECTTC--CEEEEETTTTEEEEECSTT
T ss_pred CCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEE---CCCCCcceeeECCCC--cEEEEecCCCeEEEEcCCC
Confidence 344567899999998 7788888999999998765 22222 234557899999976 3555555568999999977
Q ss_pred ceeEEEEcCC----CCCeeEEEECCCCCEEEEE----e-------------CCCeEEEEeCCCCceEEEecCCCeEEEEE
Q 048118 159 CKLRATLAGH----TGYVNTVAVSPDGSLCASG----G-------------KDGVILLWDLAEGKRLYSLDAGAVIHALC 217 (303)
Q Consensus 159 ~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~----~-------------~d~~v~iwd~~~~~~~~~~~~~~~v~~~~ 217 (303)
++........ ...+..++++|+|+++++. + ..+.|..++.. ++.............++
T Consensus 100 g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~ 178 (296)
T 3e5z_A 100 GEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLA 178 (296)
T ss_dssp CCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEEE
T ss_pred CcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCccEE
Confidence 7654332211 2346789999999988873 2 13466666655 44332233445678899
Q ss_pred EcCCCeEEEEE-cCCcEEEEeCC-CCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeE
Q 048118 218 FSPNRYWLCAA-TEQSIKIWDLE-SKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVI 295 (303)
Q Consensus 218 ~s~~~~~l~~~-~~~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v 295 (303)
|+|++..+++. .++.|++|++. .+++....... . .....+..++++++|.+.++. ++.|
T Consensus 179 ~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~----------------~~~~~p~~i~~d~~G~l~v~~--~~~v 239 (296)
T 3e5z_A 179 FLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-T----------------VEPGKTDGLRVDAGGLIWASA--GDGV 239 (296)
T ss_dssp ECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-C----------------CSSSCCCSEEEBTTSCEEEEE--TTEE
T ss_pred ECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-e----------------CCCCCCCeEEECCCCCEEEEc--CCeE
Confidence 99998766443 36789999986 44330111110 0 011122457889999866655 8889
Q ss_pred EEEec
Q 048118 296 RVWGI 300 (303)
Q Consensus 296 ~~w~~ 300 (303)
.+|+.
T Consensus 240 ~~~~~ 244 (296)
T 3e5z_A 240 HVLTP 244 (296)
T ss_dssp EEECT
T ss_pred EEECC
Confidence 99976
No 196
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.37 E-value=3.4e-10 Score=93.56 Aligned_cols=229 Identities=10% Similarity=0.089 Sum_probs=141.9
Q ss_pred cceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEeeCCCE
Q 048118 16 DMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSIDNRQ 95 (303)
Q Consensus 16 ~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~~~~~ 95 (303)
.......|+|++..++++...++.|..|+.. .+. . .+..+...+..++++++|++
T Consensus 45 ~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~~------~------------------~~~~~~~~~~gl~~d~dG~l 99 (305)
T 3dr2_A 45 TWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GTV------D------------------VLLDATAFTNGNAVDAQQRL 99 (305)
T ss_dssp SSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SCE------E------------------EEEESCSCEEEEEECTTSCE
T ss_pred cCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CCE------E------------------EEeCCCCccceeeECCCCCE
Confidence 3456778888765578888888999999762 210 0 11223456788999999987
Q ss_pred EEEEeCCCcEEEEecCCceeeeeecCCC-CccceEEEEEcCCCCCCEEEE----EeC-------------CCcEEEEECC
Q 048118 96 IVSASRDRTIKLWNTLGECKYTIQEGDA-HTEWVSCVRFSPNTLQPTIVS----ASW-------------DRTVKVWNLS 157 (303)
Q Consensus 96 l~t~~~d~~i~vw~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~----~~~-------------dg~i~iwd~~ 157 (303)
+++...++.|.+|+..+........... ....+..+.++|++ ...++ |.. .+.|..+|..
T Consensus 100 ~v~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~i~~d~dG--~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~ 177 (305)
T 3dr2_A 100 VHCEHGRRAITRSDADGQAHLLVGRYAGKRLNSPNDLIVARDG--AIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPD 177 (305)
T ss_dssp EEEETTTTEEEEECTTSCEEEEECEETTEECSCCCCEEECTTS--CEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSS
T ss_pred EEEECCCCEEEEECCCCCEEEEEeccCCCccCCCCCEEECCCC--CEEEeCcCCCccccccccccccccCCCeEEEEcCC
Confidence 7665556789999875432211111111 11235678888876 34454 322 2457777776
Q ss_pred CceeEEEEcCCCCCeeEEEECCCCCEEEEEeCC------CeEEEEeCCCCceEE---Ee-c-CCCeEEEEEEcCCCeEEE
Q 048118 158 NCKLRATLAGHTGYVNTVAVSPDGSLCASGGKD------GVILLWDLAEGKRLY---SL-D-AGAVIHALCFSPNRYWLC 226 (303)
Q Consensus 158 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d------~~v~iwd~~~~~~~~---~~-~-~~~~v~~~~~s~~~~~l~ 226 (303)
+++..... .......++|+|+++.|..+... +.|.+|++..+. +. .+ . .......++++++|.+.+
T Consensus 178 ~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G~lwv 254 (305)
T 3dr2_A 178 GSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGGWLWS 254 (305)
T ss_dssp SCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTSCEEE
T ss_pred CCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCCCEEE
Confidence 66544333 33456789999999987776654 789999987543 21 11 1 122334578888888555
Q ss_pred EEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEE
Q 048118 227 AATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRV 297 (303)
Q Consensus 227 ~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~ 297 (303)
+. .+.|.+||.+ ++.+..+... . .+.+++|+|+++.|..++.++..++
T Consensus 255 ~~-~~gv~~~~~~-g~~~~~~~~~------------------~---~~~~~~f~~d~~~L~it~~~~l~~~ 302 (305)
T 3dr2_A 255 SS-GTGVCVFDSD-GQLLGHIPTP------------------G---TASNCTFDQAQQRLFITGGPCLWML 302 (305)
T ss_dssp CC-SSEEEEECTT-SCEEEEEECS------------------S---CCCEEEECTTSCEEEEEETTEEEEE
T ss_pred ec-CCcEEEECCC-CCEEEEEECC------------------C---ceeEEEEeCCCCEEEEEcCCeEEEE
Confidence 54 4569999984 5554443321 0 1356889999998888887765544
No 197
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.37 E-value=9.3e-09 Score=84.04 Aligned_cols=233 Identities=9% Similarity=0.013 Sum_probs=148.9
Q ss_pred cceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEeeCCCE
Q 048118 16 DMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSIDNRQ 95 (303)
Q Consensus 16 ~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~~~~~ 95 (303)
..+..+++++++ .++++...++.|..|+... . .. .+.. ......+..+++.+++.+
T Consensus 57 ~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~g-~----~~------------~~~~------~~~~~~~~~i~~~~~g~l 112 (299)
T 2z2n_A 57 AKVMCLTISSDG-EVWFTENAANKIGRITKKG-I----IK------------EYTL------PNPDSAPYGITEGPNGDI 112 (299)
T ss_dssp CCEEEEEECTTS-CEEEEETTTTEEEEECTTS-C----EE------------EEEC------SSTTCCEEEEEECTTSCE
T ss_pred CceeeEEECCCC-CEEEeCCCCCeEEEECCCC-c----EE------------EEeC------CCcCCCceeeEECCCCCE
Confidence 457788888754 5777777678888887541 1 00 0000 012346788999999988
Q ss_pred EEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEE-EcCCCCCeeE
Q 048118 96 IVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRAT-LAGHTGYVNT 174 (303)
Q Consensus 96 l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~-~~~~~~~i~~ 174 (303)
+++...++.|.+|+..+... ... .......+..+++++++ ...++...++.|..||. +++.... .......+..
T Consensus 113 ~v~~~~~~~i~~~d~~g~~~-~~~-~~~~~~~~~~i~~~~~g--~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~ 187 (299)
T 2z2n_A 113 WFTEMNGNRIGRITDDGKIR-EYE-LPNKGSYPSFITLGSDN--ALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVG 187 (299)
T ss_dssp EEEETTTTEEEEECTTCCEE-EEE-CSSTTCCEEEEEECTTS--CEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEE
T ss_pred EEEecCCceEEEECCCCCEE-Eec-CCCCCCCCceEEEcCCC--CEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCccee
Confidence 88777788899998743222 121 11223457889999875 34555555788999998 6554432 2334456889
Q ss_pred EEECCCCCEEEEEeCCCeEEEEeCCCCceEEE-ec-CCCeEEEEEEcCCCeEEEEE-cCCcEEEEeCCCCceeeeeeecc
Q 048118 175 VAVSPDGSLCASGGKDGVILLWDLAEGKRLYS-LD-AGAVIHALCFSPNRYWLCAA-TEQSIKIWDLESKSIVEDLKVDL 251 (303)
Q Consensus 175 ~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~-~~-~~~~v~~~~~s~~~~~l~~~-~~~~i~iwd~~~~~~~~~~~~~~ 251 (303)
++++++++++++...++.|.+||. +++.... .. ....+..+++++++.+.++. .++.|..||.. +++ ..+...
T Consensus 188 i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~-g~~-~~~~~~- 263 (299)
T 2z2n_A 188 ITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTSN-NII-EEYPIQ- 263 (299)
T ss_dssp EEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEETT-TEE-EEEECS-
T ss_pred EEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECCC-Cce-EEEeCC-
Confidence 999999997777767889999998 5553321 22 23568899999998765555 57899999983 432 222110
Q ss_pred ccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEec
Q 048118 252 KTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 300 (303)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~ 300 (303)
.....+.++++ +++.+.++.+ .+.+..++.
T Consensus 264 -----------------~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~ 293 (299)
T 2z2n_A 264 -----------------IKSAEPHGICF-DGETIWFAME-CDKIGKLTL 293 (299)
T ss_dssp -----------------SSSCCEEEEEE-CSSCEEEEET-TTEEEEEEE
T ss_pred -----------------CCCCccceEEe-cCCCEEEEec-CCcEEEEEc
Confidence 11123466788 8887766655 556666654
No 198
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.36 E-value=7.3e-09 Score=85.17 Aligned_cols=225 Identities=12% Similarity=0.096 Sum_probs=139.3
Q ss_pred cceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEeeCCCE
Q 048118 16 DMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSIDNRQ 95 (303)
Q Consensus 16 ~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~~~~~ 95 (303)
..-.+..|++++..++++...++.|..|+....... . ......+.+++++++|.+
T Consensus 13 ~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~------~-------------------~~~~~~~~~i~~~~dG~l 67 (297)
T 3g4e_A 13 RCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ------R-------------------VTMDAPVSSVALRQSGGY 67 (297)
T ss_dssp SBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE------E-------------------EECSSCEEEEEEBTTSSE
T ss_pred ccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE------E-------------------EeCCCceEEEEECCCCCE
Confidence 345577888866677888888899999987543210 0 012346788999999996
Q ss_pred EEEEeCCCcEEEEecCCceeeeeecCC--CCccceEEEEEcCCCCCCEEEEE-eC--------CCcEEEEECCC-ceeEE
Q 048118 96 IVSASRDRTIKLWNTLGECKYTIQEGD--AHTEWVSCVRFSPNTLQPTIVSA-SW--------DRTVKVWNLSN-CKLRA 163 (303)
Q Consensus 96 l~t~~~d~~i~vw~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~-~~--------dg~i~iwd~~~-~~~~~ 163 (303)
+++ . ++.|.+||..+.....+.... .....+..++++|++. ..++. .. ...-.+|.+.. ++...
T Consensus 68 ~v~-~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~--l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~ 143 (297)
T 3g4e_A 68 VAT-I-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGR--YFAGTMAEETAPAVLERHQGALYSLFPDHHVKK 143 (297)
T ss_dssp EEE-E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSC--EEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE
T ss_pred EEE-E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCC--EEEecCCcccccccccCCCcEEEEEECCCCEEE
Confidence 554 3 567889997644332222211 1234578899999862 33332 21 12234444432 33322
Q ss_pred EEcCCCCCeeEEEECCCCCEE-EEEeCCCeEEEEeC--CCCce-----EEEec-CCCeEEEEEEcCCCeEEEE-EcCCcE
Q 048118 164 TLAGHTGYVNTVAVSPDGSLC-ASGGKDGVILLWDL--AEGKR-----LYSLD-AGAVIHALCFSPNRYWLCA-ATEQSI 233 (303)
Q Consensus 164 ~~~~~~~~i~~~~~~~~~~~l-~~~~~d~~v~iwd~--~~~~~-----~~~~~-~~~~v~~~~~s~~~~~l~~-~~~~~i 233 (303)
+.........++|+|+++.| ++.+.++.|.+||+ .++.. +..+. .......++++++|.+.++ ...+.|
T Consensus 144 -~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v 222 (297)
T 3g4e_A 144 -YFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRV 222 (297)
T ss_dssp -EEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEE
T ss_pred -EeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEE
Confidence 22233456789999999876 45556889999987 44432 12222 1346778999999865544 456789
Q ss_pred EEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEc-CCCCEEEEee
Q 048118 234 KIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWS-VDGSTLFSGY 290 (303)
Q Consensus 234 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-p~~~~l~~gs 290 (303)
.+||.++++++..+... ...+++++|. |+++.|.+++
T Consensus 223 ~~~d~~tG~~~~~i~~p--------------------~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 223 IRLDPVTGKRLQTVKLP--------------------VDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp EEECTTTCCEEEEEECS--------------------SSBEEEEEEESGGGCEEEEEE
T ss_pred EEEcCCCceEEEEEECC--------------------CCCceEEEEeCCCCCEEEEEc
Confidence 99999888877655432 1235778998 8887665444
No 199
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.35 E-value=7.7e-09 Score=87.86 Aligned_cols=249 Identities=11% Similarity=0.050 Sum_probs=147.1
Q ss_pred ecccccccccceeeeecCCCCCcEEEEec---------CCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCce
Q 048118 7 LKGTMRAHTDMVTAIATPIDNSDMIVTAS---------RDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQF 77 (303)
Q Consensus 7 ~~~~~~~h~~~v~~v~~~~~~~~~~~t~s---------~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 77 (303)
++.++.....+ .+.++|++....++.. .++.|.+||....+... .+......+.
T Consensus 59 ~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~---------------~i~~~~~~~~ 121 (373)
T 2mad_H 59 ILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIA---------------DIELPDAPRF 121 (373)
T ss_pred EEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEE---------------EEECCCcccc
Confidence 34444443333 8889998764444432 36789999986432211 1110000011
Q ss_pred ecccCCEEEEEEeeCCCEEEEEeC--CCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEE
Q 048118 78 VGHTKDVLSVAFSIDNRQIVSASR--DRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWN 155 (303)
Q Consensus 78 ~~h~~~i~~i~~~~~~~~l~t~~~--d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd 155 (303)
. +......+.|+|+|++|+.+.. ++.|.++| ........ .... . .++.+.|.+. ..+++.+.||.+.++|
T Consensus 122 ~-~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~-~i~~-~---~~~~~~~~~~-~~~~~~~~dg~~~~vd 193 (373)
T 2mad_H 122 D-VGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQ-LLSS-P---TCYHIHPGAP-STFYLLCAQGGLAKTD 193 (373)
T ss_pred c-cCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeE-EcCC-C---ceEEEEeCCC-ceEEEEcCCCCEEEEE
Confidence 0 0123457899999999988874 47899999 65432211 0111 1 1344555543 3566778899999999
Q ss_pred CCCceeEEEEc-----CCCCCe-eEEEECCCCCEEEEEeCCCeEEEEeCCCCc--eEEEecC-----------CCeEEEE
Q 048118 156 LSNCKLRATLA-----GHTGYV-NTVAVSPDGSLCASGGKDGVILLWDLAEGK--RLYSLDA-----------GAVIHAL 216 (303)
Q Consensus 156 ~~~~~~~~~~~-----~~~~~i-~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~--~~~~~~~-----------~~~v~~~ 216 (303)
. +++...... ....++ ....+.+++..++..+..+.+.+.|+..+. .+..+.. ......+
T Consensus 194 ~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~ 272 (373)
T 2mad_H 194 H-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQV 272 (373)
T ss_pred C-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeE
Confidence 9 766553221 111221 224556665554444578899999987543 2222211 1223447
Q ss_pred EEcCCCeEEEEEc-----------CCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCC-
Q 048118 217 CFSPNRYWLCAAT-----------EQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGS- 284 (303)
Q Consensus 217 ~~s~~~~~l~~~~-----------~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~- 284 (303)
+++|++..+.+.. .+.|.++|..+++.+..+.... ....++|+|||+
T Consensus 273 ~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~---------------------~p~~i~~s~Dg~~ 331 (373)
T 2mad_H 273 AYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGH---------------------DVDAISVAQDGGP 331 (373)
T ss_pred EECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCC---------------------CcCeEEECCCCCe
Confidence 7889875544432 2579999999998887664321 235689999999
Q ss_pred EEEEee-cCCeEEEEeccc
Q 048118 285 TLFSGY-TDGVIRVWGIGR 302 (303)
Q Consensus 285 ~l~~gs-~Dg~v~~w~~~~ 302 (303)
.++++. .++.|.++|+..
T Consensus 332 ~l~v~~~~~~~V~ViD~~t 350 (373)
T 2mad_H 332 DLYALSAGTEVLHIYDAGA 350 (373)
T ss_pred EEEEEcCCCCeEEEEECCC
Confidence 777877 599999999854
No 200
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.34 E-value=7.6e-10 Score=102.18 Aligned_cols=195 Identities=11% Similarity=0.024 Sum_probs=122.7
Q ss_pred ccCCEEEEEEeeCCCEEEEEeCCC-----cEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCc----
Q 048118 80 HTKDVLSVAFSIDNRQIVSASRDR-----TIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRT---- 150 (303)
Q Consensus 80 h~~~i~~i~~~~~~~~l~t~~~d~-----~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~---- 150 (303)
|...+..++|+|+|++|+.+..++ .|++||+.+........ ....+..++|+|++ ..|+.++.++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~---~~~~~~~~~wspDg--~~l~~~~~~~~~~~~ 197 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL---ERVKFSCMAWTHDG--KGMFYNAYPQQDGKS 197 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEE---EEECSCCEEECTTS--SEEEEEECCCCSSCC
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccc---cCcccceEEEEeCC--CEEEEEEECCccccc
Confidence 444678899999999988776543 89999987654332211 11124568999987 35666666655
Q ss_pred ------------EEEEECCCcee--EEEEc--CCCCCeeEEEECCCCCEEEEEeC-----CCeEEEEeCCC------Cc-
Q 048118 151 ------------VKVWNLSNCKL--RATLA--GHTGYVNTVAVSPDGSLCASGGK-----DGVILLWDLAE------GK- 202 (303)
Q Consensus 151 ------------i~iwd~~~~~~--~~~~~--~~~~~i~~~~~~~~~~~l~~~~~-----d~~v~iwd~~~------~~- 202 (303)
|++|++.+++. ...+. .+...+..+.|+|+|++|+.++. +..|.+||+.+ +.
T Consensus 198 ~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~ 277 (710)
T 2xdw_A 198 DGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGIL 277 (710)
T ss_dssp SSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC
T ss_pred cccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCcc
Confidence 99999987652 12222 24456788999999999887764 57899999976 42
Q ss_pred eEEEec-CCCeEEEEEEcCCCeEEE-EEc----CCcEEEEeCCCCce--eeeeeeccccccccccCccceeeccccceeE
Q 048118 203 RLYSLD-AGAVIHALCFSPNRYWLC-AAT----EQSIKIWDLESKSI--VEDLKVDLKTEAEKSEATTATTTIKKKNIYC 274 (303)
Q Consensus 203 ~~~~~~-~~~~v~~~~~s~~~~~l~-~~~----~~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (303)
.+..+. ....+.. .|+|++..++ .+. ...|++||+.+++. ...+.. ......+
T Consensus 278 ~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~------------------~~~~~~~ 338 (710)
T 2xdw_A 278 KWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVP------------------EHEKDVL 338 (710)
T ss_dssp CCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEEC------------------CCSSCEE
T ss_pred ceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccC------------------CCCCCeE
Confidence 233332 2222333 4777765444 333 23699999876531 111110 0011134
Q ss_pred EEEEEcCCCCEEEEeecCCeEEEE
Q 048118 275 TSLNWSVDGSTLFSGYTDGVIRVW 298 (303)
Q Consensus 275 ~~~~~sp~~~~l~~gs~Dg~v~~w 298 (303)
..++|++++.+++++..|+..++|
T Consensus 339 ~~~~~~~~~~lv~~~~~~g~~~l~ 362 (710)
T 2xdw_A 339 EWVACVRSNFLVLCYLHDVKNTLQ 362 (710)
T ss_dssp EEEEEETTTEEEEEEEETTEEEEE
T ss_pred EEEEEEcCCEEEEEEEECCEEEEE
Confidence 567888878888899999965554
No 201
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.31 E-value=4.2e-09 Score=90.64 Aligned_cols=250 Identities=10% Similarity=0.086 Sum_probs=149.8
Q ss_pred ceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEeeCCCEE
Q 048118 17 MVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSIDNRQI 96 (303)
Q Consensus 17 ~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~~~~~l 96 (303)
....+++++++ +++++...++.|+.|+....... .+. ....... ++|++++..+
T Consensus 132 ~P~~la~d~~g-~lyv~d~~~~~I~~id~~~g~~~----------------~~~--------~~~~~~~-ia~~~~g~~l 185 (409)
T 3hrp_A 132 YMWGIAAVGNN-TVLAYQRDDPRVRLISVDDNKVT----------------TVH--------PGFKGGK-PAVTKDKQRV 185 (409)
T ss_dssp CEEEEEECSTT-EEEEEETTTTEEEEEETTTTEEE----------------EEE--------ETCCBCB-CEECTTSSEE
T ss_pred CceEEEEeCCC-CEEEEecCCCcEEEEECCCCEEE----------------Eee--------ccCCCCc-eeEecCCCcE
Confidence 46788898765 57788777889999987542211 000 0011223 8899999988
Q ss_pred EEEeCCC--cEEEEecCCceee-eeecCCC-CccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEE----EcCC
Q 048118 97 VSASRDR--TIKLWNTLGECKY-TIQEGDA-HTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRAT----LAGH 168 (303)
Q Consensus 97 ~t~~~d~--~i~vw~~~~~~~~-~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~----~~~~ 168 (303)
+.+..++ .|.+++....... ....... ....+.+++++|+. ..+..+..++.|+.||..++..... ..++
T Consensus 186 ~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~--g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~ 263 (409)
T 3hrp_A 186 YSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETE--EWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGS 263 (409)
T ss_dssp EEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTS--SEEEEECTTCEEEEEETTTCCEEEEEECCCCSC
T ss_pred EEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCC--CeEEEEECCCcEEEEECCCCCEEEEecccccCC
Confidence 8888766 6777776432211 1101011 22345778899843 2455567788999999977653322 2222
Q ss_pred CCCe--eEEEECCC-CCEEEEEeCCCeEEEEeCCCCceEEEecC--------------CCeEEEEEEcCCCeEEEEE--c
Q 048118 169 TGYV--NTVAVSPD-GSLCASGGKDGVILLWDLAEGKRLYSLDA--------------GAVIHALCFSPNRYWLCAA--T 229 (303)
Q Consensus 169 ~~~i--~~~~~~~~-~~~l~~~~~d~~v~iwd~~~~~~~~~~~~--------------~~~v~~~~~s~~~~~l~~~--~ 229 (303)
...- ..++|+|+ +.++++-...++|+.|+.........-.. -.....++++|++.++++. .
T Consensus 264 ~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~ 343 (409)
T 3hrp_A 264 LGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFK 343 (409)
T ss_dssp CCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTT
T ss_pred CCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCC
Confidence 2222 38999995 55666666789999999764321111010 1347789999998755544 5
Q ss_pred CCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEec
Q 048118 230 EQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 300 (303)
Q Consensus 230 ~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~ 300 (303)
++.|+.|++.++.+.. +.-........ ... ...........++++|++.++++-..+++|+.+.+
T Consensus 344 ~~~I~~~~~~~G~v~~-~~g~~~~~g~~-~g~----~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 344 GYCLRKLDILDGYVST-VAGQVDVASQI-DGT----PLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp TCEEEEEETTTTEEEE-EEECTTCBSCC-CBS----TTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCEEEEEECCCCEEEE-EeCCCCCCCcC-CCC----hhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 6789999987775432 11110000000 000 00111234678999999888888888999998875
No 202
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.30 E-value=4.6e-08 Score=79.91 Aligned_cols=235 Identities=10% Similarity=0.024 Sum_probs=152.8
Q ss_pred cceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEeeCCCE
Q 048118 16 DMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSIDNRQ 95 (303)
Q Consensus 16 ~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~~~~~ 95 (303)
..+.++.+++++ .++++...++.|.+|+.. .... .+.. ..+...+..+++.+++.+
T Consensus 20 ~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~-~~~~----------------~~~~------~~~~~~~~~i~~~~~g~l 75 (300)
T 2qc5_A 20 SGPYGITSSEDG-KVWFTQHKANKISSLDQS-GRIK----------------EFEV------PTPDAKVMCLIVSSLGDI 75 (300)
T ss_dssp CCEEEEEECTTS-CEEEEETTTTEEEEECTT-SCEE----------------EEEC------SSTTCCEEEEEECTTSCE
T ss_pred CCcceeeECCCC-CEEEEcCCCCeEEEECCC-CceE----------------EEEC------CCCCCcceeEEECCCCCE
Confidence 467888888764 577777778899999865 2110 0000 012346788999999988
Q ss_pred EEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEE-EEcCCCCCeeE
Q 048118 96 IVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRA-TLAGHTGYVNT 174 (303)
Q Consensus 96 l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~-~~~~~~~~i~~ 174 (303)
+++...++.|..++..+... .... ......+.++++.+++ ..+++...++.|..+|.. ++... .+......+..
T Consensus 76 ~v~~~~~~~v~~~d~~g~~~-~~~~-~~~~~~~~~i~~~~~g--~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~ 150 (300)
T 2qc5_A 76 WFTENGANKIGKLSKKGGFT-EYPL-PQPDSGPYGITEGLNG--DIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAF 150 (300)
T ss_dssp EEEETTTTEEEEECTTSCEE-EEEC-SSTTCCEEEEEECSTT--CEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEE
T ss_pred EEEecCCCeEEEECCCCCeE-EecC-CCCCCCCccceECCCC--CEEEEccCCCeEEEECCC-CCEEEccCCCCCCCcee
Confidence 77776678899998764322 2211 1122457889998865 355555557889999987 54432 23333457889
Q ss_pred EEECCCCCEEEEEeCCCeEEEEeCCCCceEE-Eec-CCCeEEEEEEcCCCeEEEEEc-CCcEEEEeCCCCceeeeeeecc
Q 048118 175 VAVSPDGSLCASGGKDGVILLWDLAEGKRLY-SLD-AGAVIHALCFSPNRYWLCAAT-EQSIKIWDLESKSIVEDLKVDL 251 (303)
Q Consensus 175 ~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~-~~~-~~~~v~~~~~s~~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~ 251 (303)
+++.++++++++...++.|..+|. +++... ... ....+..+++++++.+.++.. .+.|.+||. +++... ...
T Consensus 151 i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~-- 225 (300)
T 2qc5_A 151 ITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISE-YDI-- 225 (300)
T ss_dssp EEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EEC--
T ss_pred EEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEE-EEC--
Confidence 999999997776666889999998 444332 121 234678899999887655554 567999998 443322 110
Q ss_pred ccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEec
Q 048118 252 KTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 300 (303)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~ 300 (303)
......+..+++.++|.+.++...++.|..|+.
T Consensus 226 ----------------~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 226 ----------------PTPNARPHAITAGKNSEIWFTEWGANQIGRITN 258 (300)
T ss_dssp ----------------SSTTCCEEEEEECSTTCEEEEETTTTEEEEECT
T ss_pred ----------------CCCCCCceEEEECCCCCEEEeccCCCeEEEECC
Confidence 011123467888999887777667788888875
No 203
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.30 E-value=8.9e-10 Score=89.03 Aligned_cols=194 Identities=8% Similarity=-0.054 Sum_probs=127.7
Q ss_pred CEEEEEEeeCCCEEE-EEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCcee
Q 048118 83 DVLSVAFSIDNRQIV-SASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKL 161 (303)
Q Consensus 83 ~i~~i~~~~~~~~l~-t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~ 161 (303)
.+.++++++++.+++ +...++.|.+|+..+....... ......+.++++++++ ..+++.. ++.|..||..+...
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~--~~~~~~p~~i~~~~~g--~l~v~~~-~~~i~~~d~~~~~~ 99 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLP--FNGLYQPQGLAVDGAG--TVYVTDF-NNRVVTLAAGSNNQ 99 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECC--CCSCCSCCCEEECTTC--CEEEEET-TTEEEEECTTCSCC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEe--eCCcCCcceeEECCCC--CEEEEcC-CCEEEEEeCCCceE
Confidence 677899999998777 5467889999986443221111 1222346778898875 3444444 88999999876544
Q ss_pred EEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEec-CCCeEEEEEEcCCCeEEEEE-cCCcEEEEeCC
Q 048118 162 RATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLD-AGAVIHALCFSPNRYWLCAA-TEQSIKIWDLE 239 (303)
Q Consensus 162 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~-~~~~i~iwd~~ 239 (303)
..........+..++++|+++++++...++.|.+|+..+........ ....+..+++++++.++++. .++.|.+||..
T Consensus 100 ~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~ 179 (270)
T 1rwi_B 100 TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAE 179 (270)
T ss_dssp EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTT
T ss_pred eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecC
Confidence 32212233568899999999988777778999999876544332221 22356788999988755554 46799999987
Q ss_pred CCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEecc
Q 048118 240 SKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~ 301 (303)
......... .....+..+++.++|.++++...++.|.+|+..
T Consensus 180 ~~~~~~~~~--------------------~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~ 221 (270)
T 1rwi_B 180 SNNQVVLPF--------------------TDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAG 221 (270)
T ss_dssp TCCEEECCC--------------------SSCCSEEEEEECTTCCEEEEETTTSCEEEECTT
T ss_pred CCceEeecc--------------------cCCCCceEEEECCCCCEEEEECCCCcEEEEcCC
Confidence 654322100 001234678899999877777788999999864
No 204
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.29 E-value=8e-10 Score=89.98 Aligned_cols=180 Identities=13% Similarity=0.095 Sum_probs=127.9
Q ss_pred CCCEEEEEeCCCcEEEEec-CCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEEEcCCC-
Q 048118 92 DNRQIVSASRDRTIKLWNT-LGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHT- 169 (303)
Q Consensus 92 ~~~~l~t~~~d~~i~vw~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~- 169 (303)
.+++|++++.|+.|.+||. .++..+.+.... ...+.++.+.|++ ..++ +.++.|+.||. +++.+.++..+.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~--~~~~~~~~~~pdG--~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~ 76 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEK--GWECNSVAATKAG--EILF--SYSKGAKMITR-DGRELWNIAAPAG 76 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCT--TCCCCEEEECTTS--CEEE--ECBSEEEEECT-TSCEEEEEECCTT
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCc--cCCCcCeEECCCC--CEEE--eCCCCEEEECC-CCCEEEEEcCCCC
Confidence 4568899999999999998 455444443211 1346788899986 3455 45788999998 788887777643
Q ss_pred CCeeEEEECCCCCEEEEEeC-CCeEEEEeCCCCceEEEecCC-------CeEEEEEEcCCCeEEEEE-cCCcEEEEeCCC
Q 048118 170 GYVNTVAVSPDGSLCASGGK-DGVILLWDLAEGKRLYSLDAG-------AVIHALCFSPNRYWLCAA-TEQSIKIWDLES 240 (303)
Q Consensus 170 ~~i~~~~~~~~~~~l~~~~~-d~~v~iwd~~~~~~~~~~~~~-------~~v~~~~~s~~~~~l~~~-~~~~i~iwd~~~ 240 (303)
..+.++.+.|+|+.+++.+. ++++..+|. +++.+..+... ...+.+++.+++.++++. .++.|.+||.+
T Consensus 77 ~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~- 154 (276)
T 3no2_A 77 CEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN- 154 (276)
T ss_dssp CEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-
T ss_pred ccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-
Confidence 46888999999999998887 788888885 67766665321 123445678888777655 57899999998
Q ss_pred CceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEecc
Q 048118 241 KSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~ 301 (303)
++++.++.... ...++...+++.++++++.+++|..+|..
T Consensus 155 G~~~w~~~~~~---------------------~~~~~~~~~~g~~~v~~~~~~~v~~~d~~ 194 (276)
T 3no2_A 155 GQLLNSVKLSG---------------------TPFSSAFLDNGDCLVACGDAHCFVQLNLE 194 (276)
T ss_dssp SCEEEEEECSS---------------------CCCEEEECTTSCEEEECBTTSEEEEECTT
T ss_pred CCEEEEEECCC---------------------CccceeEcCCCCEEEEeCCCCeEEEEeCc
Confidence 88877654310 01224556888888888888888887754
No 205
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.28 E-value=3.8e-08 Score=82.04 Aligned_cols=221 Identities=14% Similarity=0.048 Sum_probs=134.6
Q ss_pred eeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEeeCCCEEE
Q 048118 18 VTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSIDNRQIV 97 (303)
Q Consensus 18 v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~~~~~l~ 97 (303)
.....|+|++..++++...++.|..|+....... . + .....+.++.++++|.+++
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~------~----------~---------~~~~~v~~i~~~~dg~l~v 105 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT------V----------H---------ALPFMGSALAKISDSKQLI 105 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE------E----------E---------ECSSCEEEEEEEETTEEEE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE------E----------E---------ECCCcceEEEEeCCCeEEE
Confidence 3466788876677788777888988887532110 0 0 1124678899999998777
Q ss_pred EEeCCCcEEEEecCCceeeeeecCC--CCccceEEEEEcCCCCCCEEEEEeC------CCcEEEEECCCceeEEEEcCCC
Q 048118 98 SASRDRTIKLWNTLGECKYTIQEGD--AHTEWVSCVRFSPNTLQPTIVSASW------DRTVKVWNLSNCKLRATLAGHT 169 (303)
Q Consensus 98 t~~~d~~i~vw~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~------dg~i~iwd~~~~~~~~~~~~~~ 169 (303)
+. . ..|.+||..+.....+.... .....+..++++|++. .+++... .+.|..++ +++... +..+.
T Consensus 106 ~~-~-~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~--l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~~ 178 (326)
T 2ghs_A 106 AS-D-DGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGA--LWIGTMGRKAETGAGSIYHVA--KGKVTK-LFADI 178 (326)
T ss_dssp EE-T-TEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSC--EEEEEEETTCCTTCEEEEEEE--TTEEEE-EEEEE
T ss_pred EE-C-CCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCC--EEEEeCCCcCCCCceEEEEEe--CCcEEE-eeCCC
Confidence 54 4 34888987543322222111 1124578899999862 3333321 24566666 444332 22223
Q ss_pred CCeeEEEECCCCCEEEEE-eCCCeEEEEeCC--CC-c-----eEEEec-CCCeEEEEEEcCCCeEEEEE-cCCcEEEEeC
Q 048118 170 GYVNTVAVSPDGSLCASG-GKDGVILLWDLA--EG-K-----RLYSLD-AGAVIHALCFSPNRYWLCAA-TEQSIKIWDL 238 (303)
Q Consensus 170 ~~i~~~~~~~~~~~l~~~-~~d~~v~iwd~~--~~-~-----~~~~~~-~~~~v~~~~~s~~~~~l~~~-~~~~i~iwd~ 238 (303)
.....++|+|+++.+..+ +.++.|.+||+. ++ + .+..+. .......+++++++.+.++. .++.|.+||.
T Consensus 179 ~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~ 258 (326)
T 2ghs_A 179 SIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT 258 (326)
T ss_dssp SSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT
T ss_pred cccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC
Confidence 456789999999876544 557899999985 55 2 122222 23456788999988655444 4678999998
Q ss_pred CCCceeeeeeeccccccccccCccceeeccccceeEEEEEEc-CCCCEEEEeec
Q 048118 239 ESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWS-VDGSTLFSGYT 291 (303)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-p~~~~l~~gs~ 291 (303)
+++.+..+... ...+.+++|+ |++..|.+++.
T Consensus 259 -~g~~~~~i~~~--------------------~~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 259 -DGNHIARYEVP--------------------GKQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp -TCCEEEEEECS--------------------CSBEEEEEEESTTSCEEEEEEB
T ss_pred -CCCEEEEEECC--------------------CCCcEEEEEecCCCCEEEEEec
Confidence 45554433221 1235778998 88876654443
No 206
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.23 E-value=7e-09 Score=92.76 Aligned_cols=185 Identities=11% Similarity=0.011 Sum_probs=128.8
Q ss_pred eCCCEEEEEeCCCcEEEEecCCceee-eeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECC--CceeEEEEcC
Q 048118 91 IDNRQIVSASRDRTIKLWNTLGECKY-TIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLS--NCKLRATLAG 167 (303)
Q Consensus 91 ~~~~~l~t~~~d~~i~vw~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~--~~~~~~~~~~ 167 (303)
+.+.++++...++.|.++|..+.... .+.. ...+..+.++|++ .++++++.++.|.+||+. +.+...++..
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~----g~~p~~v~~SpDG--r~lyv~~~dg~V~viD~~~~t~~~v~~i~~ 238 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDT----GYAVHISRLSASG--RYLFVIGRDGKVNMIDLWMKEPTTVAEIKI 238 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEEC----SSCEEEEEECTTS--CEEEEEETTSEEEEEETTSSSCCEEEEEEC
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeC----CCCccceEECCCC--CEEEEEcCCCeEEEEECCCCCCcEeEEEec
Confidence 44556777888999999998654322 2221 1235689999987 367777899999999995 6777777765
Q ss_pred CCCCeeEEEEC----CCCCEEEEEeC-CCeEEEEeCCCCceEEEecCC------------CeEEEEEEcCCCeEE--EEE
Q 048118 168 HTGYVNTVAVS----PDGSLCASGGK-DGVILLWDLAEGKRLYSLDAG------------AVIHALCFSPNRYWL--CAA 228 (303)
Q Consensus 168 ~~~~i~~~~~~----~~~~~l~~~~~-d~~v~iwd~~~~~~~~~~~~~------------~~v~~~~~s~~~~~l--~~~ 228 (303)
.. ....++|+ |+|++++++.. ++++.++|..+.+.+..+... ..+..+..++++..+ ...
T Consensus 239 G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~ 317 (567)
T 1qks_A 239 GS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVK 317 (567)
T ss_dssp CS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred CC-CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEec
Confidence 33 35689999 69998877765 699999999998888776431 256778888875433 333
Q ss_pred cCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEee-cCCeEEEEecc
Q 048118 229 TEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGY-TDGVIRVWGIG 301 (303)
Q Consensus 229 ~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs-~Dg~v~~w~~~ 301 (303)
..|.|.++|....+.+....+. ...+...+.|+|+++++++++ .++.|.++|+.
T Consensus 318 ~~g~v~~vd~~~~~~~~v~~i~-------------------~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~ 372 (567)
T 1qks_A 318 ETGKILLVDYTDLNNLKTTEIS-------------------AERFLHDGGLDGSHRYFITAANARNKLVVIDTK 372 (567)
T ss_dssp TTTEEEEEETTCSSEEEEEEEE-------------------CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETT
T ss_pred CCCeEEEEecCCCccceeeeee-------------------ccccccCceECCCCCEEEEEeCCCCeEEEEECC
Confidence 5689999998765432211110 011234578999999876654 68999999875
No 207
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.22 E-value=1.3e-07 Score=77.22 Aligned_cols=234 Identities=12% Similarity=0.057 Sum_probs=146.6
Q ss_pred cceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEeeCCCE
Q 048118 16 DMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSIDNRQ 95 (303)
Q Consensus 16 ~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~~~~~ 95 (303)
..+..+.+++++ .++++...++.|..|+.. .... .+.. ......+..+++.+++.+
T Consensus 62 ~~~~~i~~~~~g-~l~v~~~~~~~v~~~d~~-g~~~----------------~~~~------~~~~~~~~~i~~~~~g~l 117 (300)
T 2qc5_A 62 AKVMCLIVSSLG-DIWFTENGANKIGKLSKK-GGFT----------------EYPL------PQPDSGPYGITEGLNGDI 117 (300)
T ss_dssp CCEEEEEECTTS-CEEEEETTTTEEEEECTT-SCEE----------------EEEC------SSTTCCEEEEEECSTTCE
T ss_pred CcceeEEECCCC-CEEEEecCCCeEEEECCC-CCeE----------------EecC------CCCCCCCccceECCCCCE
Confidence 456777777654 566666667778888754 2110 0000 011245788999999988
Q ss_pred EEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEE-EEcCCCCCeeE
Q 048118 96 IVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRA-TLAGHTGYVNT 174 (303)
Q Consensus 96 l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~-~~~~~~~~i~~ 174 (303)
+++...++.|..++..+... ... .......+.++++.+++ ...++...++.|..+|. +++... ....+...+..
T Consensus 118 ~v~~~~~~~i~~~~~~g~~~-~~~-~~~~~~~~~~i~~d~~g--~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~ 192 (300)
T 2qc5_A 118 WFTQLNGDRIGKLTADGTIY-EYD-LPNKGSYPAFITLGSDN--ALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVG 192 (300)
T ss_dssp EEEETTTTEEEEECTTSCEE-EEE-CSSTTCCEEEEEECTTS--SEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEE
T ss_pred EEEccCCCeEEEECCCCCEE-Ecc-CCCCCCCceeEEECCCC--CEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcce
Confidence 88777678899998764322 121 11123457889998875 34555555788999998 444433 22233456889
Q ss_pred EEECCCCCEEEEEeCCCeEEEEeCCCCceEEE-ec-CCCeEEEEEEcCCCeEEEEE-cCCcEEEEeCCCCceeeeeeecc
Q 048118 175 VAVSPDGSLCASGGKDGVILLWDLAEGKRLYS-LD-AGAVIHALCFSPNRYWLCAA-TEQSIKIWDLESKSIVEDLKVDL 251 (303)
Q Consensus 175 ~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~-~~-~~~~v~~~~~s~~~~~l~~~-~~~~i~iwd~~~~~~~~~~~~~~ 251 (303)
++++++++++++....+.|.++|. +++.... .. ....+.++++++++.+.++. .++.|..||. ++++. .+...
T Consensus 193 i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~-~~~~~- 268 (300)
T 2qc5_A 193 ITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITN-DNTIQ-EYQLQ- 268 (300)
T ss_dssp EEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCEE-EEECC-
T ss_pred EEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECC-CCcEE-EEECC-
Confidence 999999988777767788999998 4443322 22 23567889999998755554 3689999998 34332 12110
Q ss_pred ccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEecc
Q 048118 252 KTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~ 301 (303)
.....+.++...++|.+.++.. . .|..++..
T Consensus 269 -----------------~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 269 -----------------TENAEPHGITFGKDGSVWFALK-C-KIGKLNLN 299 (300)
T ss_dssp -----------------STTCCCCCEEECTTSCEEEECS-S-EEEEEEEC
T ss_pred -----------------ccCCccceeEeCCCCCEEEEcc-C-ceEEeCCC
Confidence 0011235578889988666665 5 77777653
No 208
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.18 E-value=1.1e-08 Score=94.85 Aligned_cols=194 Identities=14% Similarity=0.077 Sum_probs=114.7
Q ss_pred ccCCEEEEEEeeCCCEEEEEeCC-----CcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCc----
Q 048118 80 HTKDVLSVAFSIDNRQIVSASRD-----RTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRT---- 150 (303)
Q Consensus 80 h~~~i~~i~~~~~~~~l~t~~~d-----~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~---- 150 (303)
|...+..++|+|+|++|+.+..+ ..|++||+.+....... .....+..++|+|+ . .++.+..++.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~---~~~~~~~~~~wspD-~--~l~~~~~~~~~~~~ 234 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE---LKWVKFSGLAWLGN-D--ALLYSRFAEPKEGQ 234 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE---EEEEESCCCEESTT-S--EEEEEECCCC----
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc---CCCceeccEEEECC-C--EEEEEEecCccccc
Confidence 33467789999999998877654 35999998664332211 01111246789997 3 4555555443
Q ss_pred ----------EEEEECCCcee--EEEEc--CCCCCeeEEEECCCCCEEEEEeCCC-----eEEEEeCCCC--ceEEEec-
Q 048118 151 ----------VKVWNLSNCKL--RATLA--GHTGYVNTVAVSPDGSLCASGGKDG-----VILLWDLAEG--KRLYSLD- 208 (303)
Q Consensus 151 ----------i~iwd~~~~~~--~~~~~--~~~~~i~~~~~~~~~~~l~~~~~d~-----~v~iwd~~~~--~~~~~~~- 208 (303)
|++|++.+++. ...+. .+...+..+.|+|+|++|+..+.++ .|.+||+.++ +....+.
T Consensus 235 ~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~ 314 (741)
T 1yr2_A 235 AFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIP 314 (741)
T ss_dssp ----CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEEC
T ss_pred ccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecC
Confidence 88999876542 22222 2333588999999999988777544 8999999876 3123332
Q ss_pred CCCeEEEEEEcCCCeEEE-EEc----CCcEEEEeCCCCc-eeeeeeeccccccccccCccceeeccccceeEEEEEEcCC
Q 048118 209 AGAVIHALCFSPNRYWLC-AAT----EQSIKIWDLESKS-IVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVD 282 (303)
Q Consensus 209 ~~~~v~~~~~s~~~~~l~-~~~----~~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~ 282 (303)
......... +|++..++ .+. ++.|++||+.++. ....+.. .....+..++|+ +
T Consensus 315 ~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~-------------------~~~~~l~~~~~~-~ 373 (741)
T 1yr2_A 315 DLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVP-------------------ESKDNLESVGIA-G 373 (741)
T ss_dssp SSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEEC-------------------CCSSEEEEEEEE-B
T ss_pred CCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEec-------------------CCCCeEEEEEEE-C
Confidence 222223332 36665444 333 3459999987642 1111110 001123345666 5
Q ss_pred CCEEEEeecCCeEEEEec
Q 048118 283 GSTLFSGYTDGVIRVWGI 300 (303)
Q Consensus 283 ~~~l~~gs~Dg~v~~w~~ 300 (303)
+.++++...||..++|.+
T Consensus 374 ~~lv~~~~~dg~~~l~~~ 391 (741)
T 1yr2_A 374 NRLFASYIHDAKSQVLAF 391 (741)
T ss_dssp TEEEEEEEETTEEEEEEE
T ss_pred CEEEEEEEECCEEEEEEE
Confidence 567788888988888754
No 209
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.17 E-value=3.2e-08 Score=81.59 Aligned_cols=200 Identities=14% Similarity=0.110 Sum_probs=125.8
Q ss_pred CCEEEEEEeeCCCEEEE-------EeCCCcEEEEecCCceeeeeec--CCCCccceEEEEEcCC-CCCCEEEEEeCCCcE
Q 048118 82 KDVLSVAFSIDNRQIVS-------ASRDRTIKLWNTLGECKYTIQE--GDAHTEWVSCVRFSPN-TLQPTIVSASWDRTV 151 (303)
Q Consensus 82 ~~i~~i~~~~~~~~l~t-------~~~d~~i~vw~~~~~~~~~~~~--~~~~~~~i~~~~~~~~-~~~~~~~~~~~dg~i 151 (303)
..+.+++|++++.++++ ...++.|.+|+........... ...+...+.++.++++ + .+..++..+.|
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g---~l~v~~~~~~l 94 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDAN---QLFVADMRLGL 94 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSS---EEEEEETTTEE
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCC---cEEEEECCCCE
Confidence 34568899999988877 5778899999964432222211 0113345788999887 4 34445555578
Q ss_pred EEEECCCceeEEE-EcC----CCCCeeEEEECCCCCEEEEEeCC---------------CeEEEEeCCCCceEEEecCCC
Q 048118 152 KVWNLSNCKLRAT-LAG----HTGYVNTVAVSPDGSLCASGGKD---------------GVILLWDLAEGKRLYSLDAGA 211 (303)
Q Consensus 152 ~iwd~~~~~~~~~-~~~----~~~~i~~~~~~~~~~~l~~~~~d---------------~~v~iwd~~~~~~~~~~~~~~ 211 (303)
.+||.. ++.... ... ....+..++++|+|+++++...+ +.|..+|.. ++.........
T Consensus 95 ~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~ 172 (314)
T 1pjx_A 95 LVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQ 172 (314)
T ss_dssp EEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEES
T ss_pred EEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCC
Confidence 899987 654432 211 12357899999999888777655 577778765 44332222223
Q ss_pred eEEEEEEc----CCCeEE-EEE-cCCcEEEEeCC-CCceeeeeeeccccccccccCccceeeccccc-eeEEEEEEcCCC
Q 048118 212 VIHALCFS----PNRYWL-CAA-TEQSIKIWDLE-SKSIVEDLKVDLKTEAEKSEATTATTTIKKKN-IYCTSLNWSVDG 283 (303)
Q Consensus 212 ~v~~~~~s----~~~~~l-~~~-~~~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~sp~~ 283 (303)
....++++ |++..+ ++. .++.|++||.+ .+++.. .... ..+.... .....++++++|
T Consensus 173 ~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~-~~~~--------------~~~~~~~~~~p~~i~~d~~G 237 (314)
T 1pjx_A 173 FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIEN-KKVW--------------GHIPGTHEGGADGMDFDEDN 237 (314)
T ss_dssp SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEE-EEEE--------------EECCCCSSCEEEEEEEBTTC
T ss_pred CcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCcccc-ceEE--------------EECCCCCCCCCCceEECCCC
Confidence 45788999 998543 333 46889999976 333211 1000 0011111 234668899999
Q ss_pred CEEEEeecCCeEEEEecc
Q 048118 284 STLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 284 ~~l~~gs~Dg~v~~w~~~ 301 (303)
.++++...++.|.+||..
T Consensus 238 ~l~v~~~~~~~i~~~d~~ 255 (314)
T 1pjx_A 238 NLLVANWGSSHIEVFGPD 255 (314)
T ss_dssp CEEEEEETTTEEEEECTT
T ss_pred CEEEEEcCCCEEEEEcCC
Confidence 988888889999999874
No 210
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.15 E-value=2.6e-08 Score=84.15 Aligned_cols=250 Identities=13% Similarity=0.094 Sum_probs=146.7
Q ss_pred eecccccccccceeeeecCCCCCcEEEEec---------CCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCc
Q 048118 6 VLKGTMRAHTDMVTAIATPIDNSDMIVTAS---------RDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQ 76 (303)
Q Consensus 6 ~~~~~~~~h~~~v~~v~~~~~~~~~~~t~s---------~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 76 (303)
.+++++.....+ .+.++|++...+++.+ .++.|.+||....+.. ..+.+.+..+
T Consensus 70 ~v~~~I~vG~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~---------------~~I~v~~g~r 132 (386)
T 3sjl_D 70 RVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPT---------------ADIELPDAPR 132 (386)
T ss_dssp EEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEE---------------EEEEETTCCC
T ss_pred eEEEEEECCCCC--cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEE---------------EEEECCCccc
Confidence 344444443333 4889998765555542 3678999998754321 1111111000
Q ss_pred eecccCCEEEEEEeeCCCEEEEEeC--CCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEE
Q 048118 77 FVGHTKDVLSVAFSIDNRQIVSASR--DRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVW 154 (303)
Q Consensus 77 ~~~h~~~i~~i~~~~~~~~l~t~~~--d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iw 154 (303)
. ........+.++|+|++++.+.. ++.|.++|.............. |....|.+. ..+++.+.||.+.+.
T Consensus 133 ~-~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g------~~~~~P~g~-~~~~~~~~DG~~~~v 204 (386)
T 3sjl_D 133 F-LVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD------CYHIFPTAP-DTFFMHCRDGSLAKV 204 (386)
T ss_dssp C-CBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS------EEEEEEEET-TEEEEEETTSCEEEE
T ss_pred c-ccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC------cceeecCCC-ceeEEECCCCCEEEE
Confidence 0 00112346889999998887764 6899999986653322211111 111224332 356688889999999
Q ss_pred ECCC-ceeEEEEcCCC----CCee-EEEE-CCCCCEEEEEeCCCeEEEEeCCCCc--eEEEec--------C---CCeEE
Q 048118 155 NLSN-CKLRATLAGHT----GYVN-TVAV-SPDGSLCASGGKDGVILLWDLAEGK--RLYSLD--------A---GAVIH 214 (303)
Q Consensus 155 d~~~-~~~~~~~~~~~----~~i~-~~~~-~~~~~~l~~~~~d~~v~iwd~~~~~--~~~~~~--------~---~~~v~ 214 (303)
++.+ ++.......+. .++. ...| .++|+++. .+.+|+|.+.|+.++. .+..+. . .....
T Consensus 205 ~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q 283 (386)
T 3sjl_D 205 AFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQ 283 (386)
T ss_dssp ECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSS
T ss_pred ECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcc
Confidence 9876 55432221111 2222 2355 36775544 5568999999997654 222221 0 01223
Q ss_pred EEEEcCCCeEEEEEc-----------CCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCC
Q 048118 215 ALCFSPNRYWLCAAT-----------EQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDG 283 (303)
Q Consensus 215 ~~~~s~~~~~l~~~~-----------~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~ 283 (303)
.+++++++..+.+.. .+.|.++|+++++.++.+.+. ..+++++++||+
T Consensus 284 ~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg---------------------~~~~~lavs~D~ 342 (386)
T 3sjl_D 284 QVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG---------------------HEIDSINVSQDE 342 (386)
T ss_dssp CEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE---------------------EEECEEEECSSS
T ss_pred eeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC---------------------CCcceEEECCCC
Confidence 467788875554432 257999999999998876542 124579999999
Q ss_pred C-EEEEe-ecCCeEEEEeccc
Q 048118 284 S-TLFSG-YTDGVIRVWGIGR 302 (303)
Q Consensus 284 ~-~l~~g-s~Dg~v~~w~~~~ 302 (303)
+ +|+++ ..++.|.++|...
T Consensus 343 ~~~ly~tn~~~~~VsViD~~t 363 (386)
T 3sjl_D 343 KPLLYALSTGDKTLYIHDAES 363 (386)
T ss_dssp SCEEEEEETTTTEEEEEETTT
T ss_pred CeEEEEEcCCCCeEEEEECCC
Confidence 6 66664 5599999999854
No 211
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.15 E-value=1.1e-08 Score=94.13 Aligned_cols=238 Identities=13% Similarity=0.122 Sum_probs=136.3
Q ss_pred ccccceeeeecCCCCCcEEE-E----ecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEE
Q 048118 13 AHTDMVTAIATPIDNSDMIV-T----ASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSV 87 (303)
Q Consensus 13 ~h~~~v~~v~~~~~~~~~~~-t----~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i 87 (303)
+|...+..++|+|++. ++| + |+...+|++||+..++.... . +.. .....+
T Consensus 126 ~~~~~l~~~~~SpDg~-~lAy~~~~~G~~~~~i~v~dl~tg~~~~~----~------------------~~~--~k~~~~ 180 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGR-ILAYSLSLAGSDWREIHLMDVESKQPLET----P------------------LKD--VKFSGI 180 (693)
T ss_dssp TSCCEEEEEEECTTSS-EEEEEEECSSCCEEEEEEEETTTCSEEEE----E------------------EEE--EESCCC
T ss_pred CCcEEEEEEEECCCCC-EEEEEEecCCCceEEEEEEECCCCCCCcc----c------------------cCC--ceeccE
Confidence 3555678889999865 555 3 33335799999876432100 0 000 001356
Q ss_pred EEeeCCCEEEEEeCCCc-------------EEEEecCCcee--eeeecCCC-CccceEEEEEcCCCCCCEEEEEeC---C
Q 048118 88 AFSIDNRQIVSASRDRT-------------IKLWNTLGECK--YTIQEGDA-HTEWVSCVRFSPNTLQPTIVSASW---D 148 (303)
Q Consensus 88 ~~~~~~~~l~t~~~d~~-------------i~vw~~~~~~~--~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~---d 148 (303)
+|+ |++.|+.++.+.. |.+|++..... ..+..... +......+.|+|++. ..+++... .
T Consensus 181 ~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~ 258 (693)
T 3iuj_A 181 SWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDR-FLLISAANSTSG 258 (693)
T ss_dssp EEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSC-EEEEEEESSSSC
T ss_pred EEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCC-EEEEEEccCCCC
Confidence 899 9998888887743 88888754321 12222222 334467889999874 23344332 3
Q ss_pred CcEEEEECCCce-eEEEEcCCCCCeeEEEECCCCCEEE-EEeCC---CeEEEEeCCCCce--EEEe-cCCCeEEEEEEcC
Q 048118 149 RTVKVWNLSNCK-LRATLAGHTGYVNTVAVSPDGSLCA-SGGKD---GVILLWDLAEGKR--LYSL-DAGAVIHALCFSP 220 (303)
Q Consensus 149 g~i~iwd~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d---~~v~iwd~~~~~~--~~~~-~~~~~v~~~~~s~ 220 (303)
..|+++|+.+.. ....+..+....... +++++..|+ ++..+ +.|..+|+.++.. ...+ .....+. .|++
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~ 335 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHS 335 (693)
T ss_dssp CEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEE
T ss_pred cEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEE
Confidence 589999987653 334455555555554 566666554 44333 6899999987643 1222 2222222 6777
Q ss_pred CCeEEEEE--cCC--cEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecC----
Q 048118 221 NRYWLCAA--TEQ--SIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTD---- 292 (303)
Q Consensus 221 ~~~~l~~~--~~~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~D---- 292 (303)
++..|+.. .++ .|++||+..+. ...+... ....+..+.++|+++.|+....+
T Consensus 336 ~g~~lv~~~~~~g~~~l~~~d~~g~~-~~~l~~p-------------------~~~~~~~~~~~~d~~~l~~~~ss~~tP 395 (693)
T 3iuj_A 336 GSGYLFAEYMVDATARVEQFDYEGKR-VREVALP-------------------GLGSVSGFNGKHDDPALYFGFENYAQP 395 (693)
T ss_dssp ETTEEEEEEEETTEEEEEEECTTSCE-EEEECCS-------------------SSSEEEECCCCTTCSCEEEEEECSSSC
T ss_pred ECCEEEEEEEECCeeEEEEEECCCCe-eEEeecC-------------------CCceEEeeecCCCCCEEEEEecCCCCC
Confidence 76544433 343 68999987543 2222210 11123456677888766655555
Q ss_pred CeEEEEec
Q 048118 293 GVIRVWGI 300 (303)
Q Consensus 293 g~v~~w~~ 300 (303)
+.+..||+
T Consensus 396 ~~l~~~d~ 403 (693)
T 3iuj_A 396 PTLYRFEP 403 (693)
T ss_dssp CEEEEECT
T ss_pred CEEEEEEC
Confidence 78888876
No 212
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.13 E-value=9.6e-09 Score=88.20 Aligned_cols=252 Identities=12% Similarity=0.092 Sum_probs=151.6
Q ss_pred eecccccccccceeeeecCCCCCcEEEEec---------CCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCc
Q 048118 6 VLKGTMRAHTDMVTAIATPIDNSDMIVTAS---------RDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQ 76 (303)
Q Consensus 6 ~~~~~~~~h~~~v~~v~~~~~~~~~~~t~s---------~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 76 (303)
.+++++..-..+ .+.++|++...+++.. .++.|.++|........ .+.+...++
T Consensus 110 ~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~---------------~I~v~g~~r 172 (426)
T 3c75_H 110 RILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIA---------------DIELPDAPR 172 (426)
T ss_dssp EEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEE---------------EEEETTCCC
T ss_pred EEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEE---------------EEECCCccc
Confidence 444455444344 7889998766555543 46789999887543211 111110000
Q ss_pred eecccCCEEEEEEeeCCCEEEEEeC--CCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEE
Q 048118 77 FVGHTKDVLSVAFSIDNRQIVSASR--DRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVW 154 (303)
Q Consensus 77 ~~~h~~~i~~i~~~~~~~~l~t~~~--d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iw 154 (303)
+. .......+.++|+|++++.+.. ++.|.+.|.............. +....|++. ..+++.+.||.+.+.
T Consensus 173 ~~-~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g------~~~~~p~g~-~~~v~~~~dG~~~~V 244 (426)
T 3c75_H 173 FL-VGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD------CYHIFPASP-TVFYMNCRDGSLARV 244 (426)
T ss_dssp CC-BSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS------EEEEEEEET-TEEEEEETTSSEEEE
T ss_pred cc-cCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC------ceeeccCCC-cEEEEEcCCCCEEEE
Confidence 00 0112345789999999988764 5789999986543321111111 122334332 356777888998888
Q ss_pred ECCCceeEEEE----cCCCCCe-eEEEECCCCCEEEEEeCCCeEEEEeCCCCceE--EEecC--------C---CeEEEE
Q 048118 155 NLSNCKLRATL----AGHTGYV-NTVAVSPDGSLCASGGKDGVILLWDLAEGKRL--YSLDA--------G---AVIHAL 216 (303)
Q Consensus 155 d~~~~~~~~~~----~~~~~~i-~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~--~~~~~--------~---~~v~~~ 216 (303)
+..+++..... .-...++ ..+.+.+++..++..+..+++.+.|+..+... ..+.. . .....+
T Consensus 245 ~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~v 324 (426)
T 3c75_H 245 DFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQT 324 (426)
T ss_dssp ECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCE
T ss_pred ECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceee
Confidence 88655544221 1111222 23567898887777778899999998654421 11110 0 011126
Q ss_pred EEcCCCeEEEEEc-----------CCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCC-
Q 048118 217 CFSPNRYWLCAAT-----------EQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGS- 284 (303)
Q Consensus 217 ~~s~~~~~l~~~~-----------~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~- 284 (303)
+++|++..+.+.. .+.|.++|..+.+.+..+.+. .....+.|+||++
T Consensus 325 a~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg---------------------~~P~gia~spDg~~ 383 (426)
T 3c75_H 325 AYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG---------------------HEIDSINVSQDAEP 383 (426)
T ss_dssp EEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE---------------------EEECEEEECCSSSC
T ss_pred EEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC---------------------CCcCeEEEccCCCE
Confidence 7899865443332 347999999999988876542 1246789999998
Q ss_pred EEEEee-cCCeEEEEecccC
Q 048118 285 TLFSGY-TDGVIRVWGIGRY 303 (303)
Q Consensus 285 ~l~~gs-~Dg~v~~w~~~~~ 303 (303)
++++.. .++.|.++|+..+
T Consensus 384 ~lyv~n~~s~~VsVID~~t~ 403 (426)
T 3c75_H 384 LLYALSAGTQTLHIYDAATG 403 (426)
T ss_dssp EEEEEETTTTEEEEEETTTC
T ss_pred EEEEEcCCCCeEEEEECCCC
Confidence 888887 5999999998653
No 213
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.11 E-value=8e-08 Score=82.66 Aligned_cols=206 Identities=11% Similarity=0.043 Sum_probs=127.4
Q ss_pred CCEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCC--cEEEEECCCc
Q 048118 82 KDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDR--TVKVWNLSNC 159 (303)
Q Consensus 82 ~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg--~i~iwd~~~~ 159 (303)
..+..++|++++.++++...++.|++||..+.....+... . .... ++|+|++ ..++++..++ .|..++...+
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~--~-~~~~-ia~~~~g--~~l~~~d~~~~~~I~~~d~~~~ 204 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG--F-KGGK-PAVTKDK--QRVYSIGWEGTHTVYVYMKASG 204 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEET--C-CBCB-CEECTTS--SEEEEEBSSTTCEEEEEEGGGT
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc--C-CCCc-eeEecCC--CcEEEEecCCCceEEEEEcCCC
Confidence 4688999999999888777789999999875444333222 1 1123 8899876 3566666655 7888887654
Q ss_pred eeEEEE----cCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEE----ecCCCe---EEEEEEcCC-CeEEEE
Q 048118 160 KLRATL----AGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYS----LDAGAV---IHALCFSPN-RYWLCA 227 (303)
Q Consensus 160 ~~~~~~----~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~----~~~~~~---v~~~~~s~~-~~~l~~ 227 (303)
.....+ ......+.+++++|++..|.++..+++|+.||..++..... ...... ...++|+|+ +.++++
T Consensus 205 ~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~ 284 (409)
T 3hrp_A 205 WAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMS 284 (409)
T ss_dssp TCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEE
T ss_pred ceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEE
Confidence 433333 21345678899999555555566788999999987653221 111111 228999994 655554
Q ss_pred E-cCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEee-cCCeEEEEec
Q 048118 228 A-TEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGY-TDGVIRVWGI 300 (303)
Q Consensus 228 ~-~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs-~Dg~v~~w~~ 300 (303)
. ..+.|+.|+.... . ..+.-..... ..... ............++++|+|.++++-+ .+++|+.|++
T Consensus 285 d~~~~~I~~~~~~g~-~-~~~~g~~~~~---g~~dg--~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~ 352 (409)
T 3hrp_A 285 DQNLSSVYKITPDGE-C-EWFCGSATQK---TVQDG--LREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDI 352 (409)
T ss_dssp ETTTTEEEEECTTCC-E-EEEEECTTCC---SCBCE--EGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEET
T ss_pred eCCCCEEEEEecCCC-E-EEEEeCCCCC---CcCCC--cccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEEC
Confidence 4 4678999997643 1 1111000000 00000 00001122357899999999888877 8999999984
No 214
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.09 E-value=7.6e-08 Score=80.78 Aligned_cols=249 Identities=12% Similarity=0.070 Sum_probs=144.2
Q ss_pred eeecccccccccceeeeecCCCCCcEEEEec--CCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccC
Q 048118 5 LVLKGTMRAHTDMVTAIATPIDNSDMIVTAS--RDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTK 82 (303)
Q Consensus 5 ~~~~~~~~~h~~~v~~v~~~~~~~~~~~t~s--~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~ 82 (303)
|+++..+. ..+..|++++++ +++++.. .++.++||.+. ..+ ...++... .....|..
T Consensus 9 ~~~v~~~~---~~p~~va~~~~g-~~~v~~~~~~~~~~~l~~~~-~g~-----~~~~p~~~-----------~~~~~~~~ 67 (343)
T 2qe8_A 9 LEVVAELS---LAPGNITLTPDG-RLFLSLHQFYQPEMQVAELT-QDG-----LIPFPPQS-----------GNAIITFD 67 (343)
T ss_dssp CEEEEEES---SCEEEEEECTTS-CEEEEECGGGCCSCSEEEEE-TTE-----EEESCCCC-----------SSCCCCCS
T ss_pred eEEEEEcC---CCcceEEECCCC-CEEEEeCCCCCCceEEEEEC-CCC-----eecCCCcc-----------cCccccee
Confidence 44444433 468899999865 6788863 23447777765 211 11111100 01123556
Q ss_pred CEEEEEEeeCCCEEEEEeC-----CCcEEEEecCCce-eeeeecC---CCCccceEEEEEcCCCCCCEEEEEe---CCCc
Q 048118 83 DVLSVAFSIDNRQIVSASR-----DRTIKLWNTLGEC-KYTIQEG---DAHTEWVSCVRFSPNTLQPTIVSAS---WDRT 150 (303)
Q Consensus 83 ~i~~i~~~~~~~~l~t~~~-----d~~i~vw~~~~~~-~~~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~---~dg~ 150 (303)
.+..+++++++.++++-.. ++.|.+||..+.. ...+... ..+......++++|+.. ...++-. .++.
T Consensus 68 ~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g-~~yvtd~~~~~~~~ 146 (343)
T 2qe8_A 68 TVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHN-FVYISDPAPDDKAA 146 (343)
T ss_dssp CEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTT-EEEEEECCSGGGCE
T ss_pred EeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCC-EEEEEcCccCCCCe
Confidence 8999999999876665433 5789999986443 2222211 11223457888987532 2344444 6789
Q ss_pred EEEEECCCceeEEEEcCCC-----------------------------CCeeEEEECCCCCEEEEEeCCC-eEEEEeCC-
Q 048118 151 VKVWNLSNCKLRATLAGHT-----------------------------GYVNTVAVSPDGSLCASGGKDG-VILLWDLA- 199 (303)
Q Consensus 151 i~iwd~~~~~~~~~~~~~~-----------------------------~~i~~~~~~~~~~~l~~~~~d~-~v~iwd~~- 199 (303)
|.+||+.+++....+.+|. ..+..++++|+++.|.++..++ .+..++..
T Consensus 147 i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~ 226 (343)
T 2qe8_A 147 LIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSAD 226 (343)
T ss_dssp EEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHH
T ss_pred EEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHH
Confidence 9999998777655543321 1357899999999888777655 55555431
Q ss_pred --CCc--------eEEEecCCCeEEEEEEcCCCeEEEEE-cCCcEEEEeCCCCceeeeeeeccccccccccCccceeecc
Q 048118 200 --EGK--------RLYSLDAGAVIHALCFSPNRYWLCAA-TEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIK 268 (303)
Q Consensus 200 --~~~--------~~~~~~~~~~v~~~~~s~~~~~l~~~-~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (303)
.+. .+...........+++++++.+.++. .++.|.+||.+++++......
T Consensus 227 ~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~------------------- 287 (343)
T 2qe8_A 227 LSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTD------------------- 287 (343)
T ss_dssp HTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEEC-------------------
T ss_pred hcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEEC-------------------
Confidence 110 00111111234458899988655554 578999999855543211110
Q ss_pred ccceeEEEEEEcCCCCEEEEeecCCe
Q 048118 269 KKNIYCTSLNWSVDGSTLFSGYTDGV 294 (303)
Q Consensus 269 ~~~~~~~~~~~sp~~~~l~~gs~Dg~ 294 (303)
....+..++++.+++.++++.+..+.
T Consensus 288 ~~~~~p~~va~~~~g~l~v~~~~~~~ 313 (343)
T 2qe8_A 288 EKLSWTDSFNFGSDGYLYFDCNQLHH 313 (343)
T ss_dssp GGGSCEEEEEECTTSCEEEEECCGGG
T ss_pred CceecCCeeEECCCCcEEEEeCcccc
Confidence 01234577899999888777765443
No 215
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.05 E-value=4.6e-07 Score=74.36 Aligned_cols=194 Identities=12% Similarity=0.081 Sum_probs=118.5
Q ss_pred EEEEEEeeC-CCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeE
Q 048118 84 VLSVAFSID-NRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLR 162 (303)
Q Consensus 84 i~~i~~~~~-~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~ 162 (303)
.-+..|+++ +.++.+...++.|..|+..+....... ....+.+++++|++. ++.+. ++.|.+||..+++..
T Consensus 15 ~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~----~~~~~~~i~~~~dG~---l~v~~-~~~l~~~d~~~g~~~ 86 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVT----MDAPVSSVALRQSGG---YVATI-GTKFCALNWKEQSAV 86 (297)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEE----CSSCEEEEEEBTTSS---EEEEE-TTEEEEEETTTTEEE
T ss_pred ccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEe----CCCceEEEEECCCCC---EEEEE-CCeEEEEECCCCcEE
Confidence 346788885 455666667889999998654332221 134588999999862 34344 568999999877654
Q ss_pred EEEcC----CCCCeeEEEECCCCCEEEEEeC-----------CCeEEEEeCCCCceEEEecCCCeEEEEEEcCCCeEEEE
Q 048118 163 ATLAG----HTGYVNTVAVSPDGSLCASGGK-----------DGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCA 227 (303)
Q Consensus 163 ~~~~~----~~~~i~~~~~~~~~~~l~~~~~-----------d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 227 (303)
..... ....+..++++|+|+++++... .+.|..++.. ++...........+.++|+|++..+..
T Consensus 87 ~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~~~~~pngi~~spdg~~lyv 165 (297)
T 3g4e_A 87 VLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYFDQVDISNGLDWSLDHKIFYY 165 (297)
T ss_dssp EEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEEEEESBEEEEEECTTSCEEEE
T ss_pred EEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEEEeeccccccceEEcCCCCEEEE
Confidence 32221 1234788999999997765432 1344444432 332222222345678999999865433
Q ss_pred --EcCCcEEEEeC--CCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEecc
Q 048118 228 --ATEQSIKIWDL--ESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 228 --~~~~~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~ 301 (303)
..++.|++|++ .++.+.. .+.. ..+.........+++.++|.+.++....+.|..||..
T Consensus 166 ~~~~~~~i~~~~~d~~~G~~~~-~~~~--------------~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~ 228 (297)
T 3g4e_A 166 IDSLSYSVDAFDYDLQTGQISN-RRSV--------------YKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPV 228 (297)
T ss_dssp EEGGGTEEEEEEECTTTCCEEE-EEEE--------------EECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTT
T ss_pred ecCCCCcEEEEeccCCCCcccC-cEEE--------------EECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCC
Confidence 33688999987 4444321 1100 0011112244678889999888877788889999863
No 216
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.03 E-value=3.5e-07 Score=76.13 Aligned_cols=192 Identities=13% Similarity=0.030 Sum_probs=115.6
Q ss_pred EEEEEEeeCC-CEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeE
Q 048118 84 VLSVAFSIDN-RQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLR 162 (303)
Q Consensus 84 i~~i~~~~~~-~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~ 162 (303)
..+..|+|++ .++++...++.|..|+..+....... ....+.++.++|++ .++.++.+ -|.+||..+++..
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~----~~~~v~~i~~~~dg---~l~v~~~~-gl~~~d~~~g~~~ 122 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKTVHA----LPFMGSALAKISDS---KQLIASDD-GLFLRDTATGVLT 122 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEE----CSSCEEEEEEEETT---EEEEEETT-EEEEEETTTCCEE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE----CCCcceEEEEeCCC---eEEEEECC-CEEEEECCCCcEE
Confidence 3567899974 45666667889999998654332222 12458889999875 24444444 4899998877654
Q ss_pred EEEcC---C-CCCeeEEEECCCCCEEEEEeC------CCeEEEEeCCCCceEEEecCCCeEEEEEEcCCCeEEEEE--cC
Q 048118 163 ATLAG---H-TGYVNTVAVSPDGSLCASGGK------DGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAA--TE 230 (303)
Q Consensus 163 ~~~~~---~-~~~i~~~~~~~~~~~l~~~~~------d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~--~~ 230 (303)
..... . ...+..+.++|+|+++++... .+.|..++ +++...........+.++|+|++..+..+ .+
T Consensus 123 ~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~ 200 (326)
T 2ghs_A 123 LHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKV 200 (326)
T ss_dssp EEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTT
T ss_pred EEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCC
Confidence 32221 1 235789999999997765542 24566666 44432211222346789999998655433 36
Q ss_pred CcEEEEeCC--CC-ceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEec
Q 048118 231 QSIKIWDLE--SK-SIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 300 (303)
Q Consensus 231 ~~i~iwd~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~ 300 (303)
+.|++||++ ++ ++.. .+.. ..+.........+.+.++|.+.++...++.|..|+.
T Consensus 201 ~~I~~~d~~~~~Gl~~~~-~~~~--------------~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~ 258 (326)
T 2ghs_A 201 NRLMRVPLDARTGLPTGK-AEVF--------------IDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT 258 (326)
T ss_dssp CEEEEEEBCTTTCCBSSC-CEEE--------------EECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT
T ss_pred CEEEEEEcccccCCcccC-ceEE--------------EECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC
Confidence 789999986 44 3211 0000 000001122356778888887776666788888875
No 217
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.02 E-value=1e-10 Score=99.36 Aligned_cols=186 Identities=15% Similarity=0.095 Sum_probs=98.2
Q ss_pred CcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEeeCCCEEEEEeCCCcEEE
Q 048118 28 SDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSIDNRQIVSASRDRTIKL 107 (303)
Q Consensus 28 ~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~~~~~l~t~~~d~~i~v 107 (303)
++++++++.|+.|..||...++.... +.. +.+.+..+..++..+++++.|+.|..
T Consensus 9 ~~~v~~gs~dg~v~a~d~~tG~~~W~-----~~~--------------------~~~~s~p~~~~g~~~v~~s~dg~l~a 63 (369)
T 2hz6_A 9 ETLLFVSTLDGSLHAVSKRTGSIKWT-----LKE--------------------DPVLQVPTHVEEPAFLPDPNDGSLYT 63 (369)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEE-----EEC--------------------CCSCCCC-----CCEEECTTTCCEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEE-----ecC--------------------CCceecceEcCCCEEEEeCCCCEEEE
Confidence 46899999999999999876543221 110 11222223456667787889999999
Q ss_pred EecCC-ceeeeeecCCCCccceEEEEEcCCC-CCCEEEEEeCCCcEEEEECCCceeEEEEcCCCCCeeEEEECCCCCEEE
Q 048118 108 WNTLG-ECKYTIQEGDAHTEWVSCVRFSPNT-LQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCA 185 (303)
Q Consensus 108 w~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 185 (303)
||... +..+.... . ....+. .+|-. ....+++++.++.++.||.++++.+..+..+. ...++|++..++
T Consensus 64 ~d~~tG~~~w~~~~-~-~~~~~~---~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~ 134 (369)
T 2hz6_A 64 LGSKNNEGLTKLPF-T-IPELVQ---ASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLY 134 (369)
T ss_dssp C-----CCSEECSC-C-HHHHHT---TCSCC-----CCCCEEEEEEEEECCC--------------------------EE
T ss_pred EECCCCceeeeeec-c-Cccccc---cCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEE
Confidence 99743 22222110 0 001110 01110 11246677889999999999998876665443 234567788889
Q ss_pred EEeCCCeEEEEeCCCCceEEEecCCCeEEEEEEcCC----CeEEEEEcCCcEEEEeCCCCceeeeee
Q 048118 186 SGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPN----RYWLCAATEQSIKIWDLESKSIVEDLK 248 (303)
Q Consensus 186 ~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~----~~~l~~~~~~~i~iwd~~~~~~~~~~~ 248 (303)
+++.|+.|+.||.++++.+..+.... ....++.++ +.+++++.++.|+.||.++++.+....
T Consensus 135 ~~~~dg~v~a~d~~tG~~~W~~~~~~-~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 200 (369)
T 2hz6_A 135 LGRTEYTITMYDTKTRELRWNATYFD-YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN 200 (369)
T ss_dssp EEEEEEEEECCCSSSSSCCCEEEEEE-ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE
T ss_pred EEecCCEEEEEECCCCCEEEeEeccc-ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEec
Confidence 99999999999999998766543211 122233332 567777889999999999998876544
No 218
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.93 E-value=2.6e-06 Score=72.86 Aligned_cols=241 Identities=14% Similarity=0.144 Sum_probs=136.3
Q ss_pred CCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCcee-c-ccCCEEEEEEeeCCCEEEEEeCC
Q 048118 25 IDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFV-G-HTKDVLSVAFSIDNRQIVSASRD 102 (303)
Q Consensus 25 ~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~-h~~~i~~i~~~~~~~~l~t~~~d 102 (303)
+++..+++++..++.|.++|..+........ +. +.++ .+. . -......+...|+| +++++..+
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~--k~-----------ie~~-~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~ 157 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKII--KV-----------IEPE-EVKKVSGYSRLHTVHCGPDA-IYISALGN 157 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEE--EE-----------ECHH-HHHHHHCEEEEEEEEECSSC-EEEEEEEE
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceee--ee-----------echh-hcccccCCCcccceeECCCe-EEEEcCCC
Confidence 6677788889999999999986432211100 00 0000 000 0 01133456677888 66666555
Q ss_pred ------CcEEEEecCCceeeeeecCCCCc-cceEEEEEcCCCCCCEEEEEe-------------------CCCcEEEEEC
Q 048118 103 ------RTIKLWNTLGECKYTIQEGDAHT-EWVSCVRFSPNTLQPTIVSAS-------------------WDRTVKVWNL 156 (303)
Q Consensus 103 ------~~i~vw~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~-------------------~dg~i~iwd~ 156 (303)
+.+.+.|..+............. ..-..+.|+|+. ..+++.. ....|.+||+
T Consensus 158 ~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~--~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~ 235 (462)
T 2ece_A 158 EEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPN--EVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDL 235 (462)
T ss_dssp TTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTT--TEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEET
T ss_pred cCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCC--CEEEEccCcCccccccccchhhhhhccCCEEEEEEC
Confidence 68999997643322221111111 112357788875 4667664 3689999999
Q ss_pred CCceeEEEEcCC-C-CCeeEEEE--CCCCCEEEEEe------CCCeEEEEeCCCCce--EEEe--cC-------------
Q 048118 157 SNCKLRATLAGH-T-GYVNTVAV--SPDGSLCASGG------KDGVILLWDLAEGKR--LYSL--DA------------- 209 (303)
Q Consensus 157 ~~~~~~~~~~~~-~-~~i~~~~~--~~~~~~l~~~~------~d~~v~iwd~~~~~~--~~~~--~~------------- 209 (303)
.+++...++.-. . .....+.| +|+++++.+++ .+++|.+|....++. +..+ ..
T Consensus 236 ~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~ 315 (462)
T 2ece_A 236 RKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKP 315 (462)
T ss_dssp TTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGG
T ss_pred CCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccc
Confidence 988877777642 1 22345555 99999876665 566887765543321 1111 10
Q ss_pred ----CCeEEEEEEcCCCeEEEEEc--CCcEEEEeCCCC---ceeeeeeeccccccccccCccceeecccc--ceeEEEEE
Q 048118 210 ----GAVIHALCFSPNRYWLCAAT--EQSIKIWDLESK---SIVEDLKVDLKTEAEKSEATTATTTIKKK--NIYCTSLN 278 (303)
Q Consensus 210 ----~~~v~~~~~s~~~~~l~~~~--~~~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 278 (303)
......+.+|+|+.+|.++. .+.|.+||+... +++..+.+. ... .... .. ++. ......+.
T Consensus 316 f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tG--G~~--~~~~---~~-~G~~~~ggPr~~~ 387 (462)
T 2ece_A 316 FKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLG--GIF--HRAD---HP-AGHKLTGAPQMLE 387 (462)
T ss_dssp GTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECB--TTT--TCBC---CT-TSCCCCSCCCCEE
T ss_pred cccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeC--Cee--cccc---cc-ccccCCCCCCEEE
Confidence 23456788999998776664 678999998532 344333321 000 0000 00 000 01234578
Q ss_pred EcCCCCEEEEee
Q 048118 279 WSVDGSTLFSGY 290 (303)
Q Consensus 279 ~sp~~~~l~~gs 290 (303)
++|||++|.++.
T Consensus 388 lSpDGk~LyVaN 399 (462)
T 2ece_A 388 ISRDGRRVYVTN 399 (462)
T ss_dssp ECTTSSEEEEEC
T ss_pred EcCCCCEEEEEc
Confidence 999999999888
No 219
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.91 E-value=2e-07 Score=79.63 Aligned_cols=208 Identities=17% Similarity=0.183 Sum_probs=123.0
Q ss_pred eCCCEE-EEEeCCCcEEEEecCCcee-----eeeecC----CCCccceEEEEEcCCCCCCEEEEEeCC------CcEEEE
Q 048118 91 IDNRQI-VSASRDRTIKLWNTLGECK-----YTIQEG----DAHTEWVSCVRFSPNTLQPTIVSASWD------RTVKVW 154 (303)
Q Consensus 91 ~~~~~l-~t~~~d~~i~vw~~~~~~~-----~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~d------g~i~iw 154 (303)
+++++| +++..++.|.++|...... ..+... +.....-..+...|++ .++++..+ +.|.++
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG---i~Vs~~g~~~g~~~g~v~vl 169 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA---IYISALGNEEGEGPGGILML 169 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC---EEEEEEEETTSCSCCEEEEE
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe---EEEEcCCCcCCCCCCeEEEE
Confidence 666654 5566788999999753311 111000 0011123445666875 45554444 789999
Q ss_pred ECCCceeEEEEcCCC---CCeeEEEECCCCCEEEEEe-------------------CCCeEEEEeCCCCceEEEecCC--
Q 048118 155 NLSNCKLRATLAGHT---GYVNTVAVSPDGSLCASGG-------------------KDGVILLWDLAEGKRLYSLDAG-- 210 (303)
Q Consensus 155 d~~~~~~~~~~~~~~---~~i~~~~~~~~~~~l~~~~-------------------~d~~v~iwd~~~~~~~~~~~~~-- 210 (303)
|.++++.+.++.... ..-..+.|+|+++.++++. ...+|.+||+.+++.+.++..+
T Consensus 170 D~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~ 249 (462)
T 2ece_A 170 DHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE 249 (462)
T ss_dssp CTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT
T ss_pred ECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCC
Confidence 999999888876322 2234688999999888774 3789999999998888887664
Q ss_pred -CeEEEEEE--cCCCeEEEE--E-----cCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEc
Q 048118 211 -AVIHALCF--SPNRYWLCA--A-----TEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWS 280 (303)
Q Consensus 211 -~~v~~~~~--s~~~~~l~~--~-----~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 280 (303)
.....+.| +|++.++.+ . -+++|.+|..+.++......+++...............+.+.......+.+|
T Consensus 250 g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS 329 (462)
T 2ece_A 250 NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDIS 329 (462)
T ss_dssp EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEEC
T ss_pred CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEEC
Confidence 23445555 999865433 3 4568888776654432222121111000000000000000101234678899
Q ss_pred CCCCEEEEeec-CCeEEEEecc
Q 048118 281 VDGSTLFSGYT-DGVIRVWGIG 301 (303)
Q Consensus 281 p~~~~l~~gs~-Dg~v~~w~~~ 301 (303)
|||++|.++.. .+.|.+||+.
T Consensus 330 ~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 330 LDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp TTSCEEEEEETTTTEEEEEECS
T ss_pred CCCCEEEEEeCCCCEEEEEEec
Confidence 99998876655 7899999974
No 220
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.88 E-value=7.1e-08 Score=81.41 Aligned_cols=243 Identities=10% Similarity=0.042 Sum_probs=140.4
Q ss_pred eecccccccccceeeeecCCCCCcEEEEec---------CCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCc
Q 048118 6 VLKGTMRAHTDMVTAIATPIDNSDMIVTAS---------RDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQ 76 (303)
Q Consensus 6 ~~~~~~~~h~~~v~~v~~~~~~~~~~~t~s---------~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 76 (303)
++++++.....+ .+.++|++...+++.+ .+++|.+||....+... .+.+....+
T Consensus 57 ~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~---------------~I~v~~~~~ 119 (368)
T 1mda_H 57 VTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIA---------------DIELPDAPR 119 (368)
T ss_dssp EEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEE---------------EEEETTSCS
T ss_pred eEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEE---------------EEECCCccc
Confidence 445555444444 7899998776555542 47899999987654221 111110000
Q ss_pred eecccCCEEEEEEeeCCCEEEEEeC--CCcEEE--EecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEE
Q 048118 77 FVGHTKDVLSVAFSIDNRQIVSASR--DRTIKL--WNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVK 152 (303)
Q Consensus 77 ~~~h~~~i~~i~~~~~~~~l~t~~~--d~~i~v--w~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~ 152 (303)
+. .......+.++|+|++++.+.. +..+.+ +|... ...+.... |....|++. ..+++.+.|+.+.
T Consensus 120 ~~-~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t--v~~i~v~~-------~~~~~p~g~-~~~~~~~~dg~~~ 188 (368)
T 1mda_H 120 FS-VGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD--DQLTKSAS-------CFHIHPGAA-ATHYLGSCPASLA 188 (368)
T ss_dssp CC-BSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE--EEEEECSS-------CCCCEEEET-TEEECCCCTTSCE
T ss_pred cc-cCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh--ceEEECCC-------ceEEccCCC-eEEEEEcCCCCEE
Confidence 00 0012446889999999888864 456888 88744 22221110 011234432 3456667788888
Q ss_pred EEECCC-----ceeEEE----EcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCc--eEEEecCC-------Ce--
Q 048118 153 VWNLSN-----CKLRAT----LAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK--RLYSLDAG-------AV-- 212 (303)
Q Consensus 153 iwd~~~-----~~~~~~----~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~--~~~~~~~~-------~~-- 212 (303)
+.|+.+ ++.... +.-...+. . ++++..++..+. +.+.+.|+.++. .+..+... ..
T Consensus 189 ~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p 263 (368)
T 1mda_H 189 ASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRS 263 (368)
T ss_dssp EEECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEE
T ss_pred EEECccccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEecccccccccccc
Confidence 888876 332210 11112233 3 566666666666 999999986542 22222211 11
Q ss_pred --EEEEEEcCCCeEEEEE-c-C--------CcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEc
Q 048118 213 --IHALCFSPNRYWLCAA-T-E--------QSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWS 280 (303)
Q Consensus 213 --v~~~~~s~~~~~l~~~-~-~--------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 280 (303)
...++++|++..+.++ . . +.+.++|+.+.+.+..+.+. .....++|+
T Consensus 264 ~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg---------------------~~p~gi~~s 322 (368)
T 1mda_H 264 AGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNG---------------------HDSDAIIAA 322 (368)
T ss_dssp CSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEE---------------------EEECEEEEC
T ss_pred CcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECC---------------------CCcceEEEC
Confidence 1126799997544432 2 2 35779999999888766532 124678999
Q ss_pred CCCC-EEEEee-cCCeEEEEeccc
Q 048118 281 VDGS-TLFSGY-TDGVIRVWGIGR 302 (303)
Q Consensus 281 p~~~-~l~~gs-~Dg~v~~w~~~~ 302 (303)
|||+ .+++.. .++.|.++|+..
T Consensus 323 ~Dg~~l~va~~~~~~~VsVID~~t 346 (368)
T 1mda_H 323 QDGASDNYANSAGTEVLDIYDAAS 346 (368)
T ss_dssp CSSSCEEEEEETTTTEEEEEESSS
T ss_pred CCCCEEEEEccCCCCeEEEEECCC
Confidence 9998 455666 599999999864
No 221
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.88 E-value=8.6e-07 Score=72.98 Aligned_cols=153 Identities=14% Similarity=0.104 Sum_probs=98.2
Q ss_pred CCEEEEEEeeCCC-EEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCce
Q 048118 82 KDVLSVAFSIDNR-QIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCK 160 (303)
Q Consensus 82 ~~i~~i~~~~~~~-~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~ 160 (303)
.-.....|+++++ ++.+...++.|..|+..+.. .... .....+..+.+++++ ..+++...++.|..|+.. ++
T Consensus 45 ~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~~-~~~~---~~~~~~~gl~~d~dG--~l~v~~~~~~~v~~~~~~-g~ 117 (305)
T 3dr2_A 45 TWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGTV-DVLL---DATAFTNGNAVDAQQ--RLVHCEHGRRAITRSDAD-GQ 117 (305)
T ss_dssp SSEEEEEEEGGGTEEEEEETTTTEEEEEETTSCE-EEEE---ESCSCEEEEEECTTS--CEEEEETTTTEEEEECTT-SC
T ss_pred cCccCCeEeCCCCEEEEEECCCCEEEEEeCCCCE-EEEe---CCCCccceeeECCCC--CEEEEECCCCEEEEECCC-CC
Confidence 3456788999998 56677778899999875432 2221 123457889999976 344444445789999875 44
Q ss_pred eEEEEc---CC-CCCeeEEEECCCCCEEEE----EeC-------------CCeEEEEeCCCCceEEEecCCCeEEEEEEc
Q 048118 161 LRATLA---GH-TGYVNTVAVSPDGSLCAS----GGK-------------DGVILLWDLAEGKRLYSLDAGAVIHALCFS 219 (303)
Q Consensus 161 ~~~~~~---~~-~~~i~~~~~~~~~~~l~~----~~~-------------d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s 219 (303)
...... +. ...+..++++|+|+++++ |.. .+.|..+|..+++..... .....+.++|+
T Consensus 118 ~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~s 196 (305)
T 3dr2_A 118 AHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFS 196 (305)
T ss_dssp EEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEEC
T ss_pred EEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEc
Confidence 322211 11 134678999999998886 332 256888887666543222 22456789999
Q ss_pred CCCeEEEEE-cC------CcEEEEeCCCCc
Q 048118 220 PNRYWLCAA-TE------QSIKIWDLESKS 242 (303)
Q Consensus 220 ~~~~~l~~~-~~------~~i~iwd~~~~~ 242 (303)
|++..|..+ .. +.|++|++..+.
T Consensus 197 pdg~~lyv~~~~~~~~~~~~i~~~~~~~~~ 226 (305)
T 3dr2_A 197 PDEQTLYVSQTPEQGHGSVEITAFAWRDGA 226 (305)
T ss_dssp TTSSEEEEEECCC---CCCEEEEEEEETTE
T ss_pred CCCCEEEEEecCCcCCCCCEEEEEEecCCC
Confidence 998755443 33 689999987654
No 222
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.88 E-value=7.4e-10 Score=94.11 Aligned_cols=177 Identities=16% Similarity=0.155 Sum_probs=89.8
Q ss_pred CCCEEEEEeCCCcEEEEecC-CceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEEEcCCCC
Q 048118 92 DNRQIVSASRDRTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTG 170 (303)
Q Consensus 92 ~~~~l~t~~~d~~i~vw~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 170 (303)
++..+++++.|+.|..||.. ++..+.... ..+.+..+..++ ..+++++.|+.|+.||.++++....+..+..
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-----~~~~s~p~~~~g--~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~ 80 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-----DPVLQVPTHVEE--PAFLPDPNDGSLYTLGSKNNEGLTKLPFTIP 80 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC-----CCSCCCC-------CCEEECTTTCCEEEC-----CCSEECSCCHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC-----CCceecceEcCC--CEEEEeCCCCEEEEEECCCCceeeeeeccCc
Confidence 46788899999999999964 344444332 112222222332 2466678999999999988876555543211
Q ss_pred -Cee-EEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEecCCCeEEEEEEcCCC-eEEEEEcCCcEEEEeCCCCceeeee
Q 048118 171 -YVN-TVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNR-YWLCAATEQSIKIWDLESKSIVEDL 247 (303)
Q Consensus 171 -~i~-~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~~~i~iwd~~~~~~~~~~ 247 (303)
.+. +..+. .+..+++++.|+.++.||.++|+.+..+..... ..++|++ .+++++.++.|+.||.++++++...
T Consensus 81 ~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~---~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 81 ELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA---DSLSPSTSLLYLGRTEYTITMYDTKTRELRWNA 156 (369)
T ss_dssp HHHTTCSCC------CCCCEEEEEEEEECCC-------------------------EEEEEEEEEEECCCSSSSSCCCEE
T ss_pred cccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc---ccccccCCEEEEEecCCEEEEEECCCCCEEEeE
Confidence 110 01111 345677888899999999999998877654332 2344554 4555667899999999998876554
Q ss_pred eeccccccccccCccceeeccccceeEEEEEEcCCC---CEEEEeecCCeEEEEecc
Q 048118 248 KVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDG---STLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~---~~l~~gs~Dg~v~~w~~~ 301 (303)
..... ....+.++. ..+++++.||.++.||..
T Consensus 157 ~~~~~----------------------~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~ 191 (369)
T 2hz6_A 157 TYFDY----------------------AASLPEDDVDYKMSHFVSNGDGLVVTVDSE 191 (369)
T ss_dssp EEEEE----------------------CCBCCCCCTTCCCCEEEEETSCEEEEECTT
T ss_pred ecccc----------------------cCccccCCccccceEEEECCCCEEEEEECC
Confidence 32100 011122221 456778888888888863
No 223
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.88 E-value=1.8e-06 Score=69.12 Aligned_cols=203 Identities=6% Similarity=0.014 Sum_probs=128.8
Q ss_pred EEEEEEeeCCCEEEEEeC--CCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCcee
Q 048118 84 VLSVAFSIDNRQIVSASR--DRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKL 161 (303)
Q Consensus 84 i~~i~~~~~~~~l~t~~~--d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~ 161 (303)
...+.|++++.++++.+. ++.|++.|..............+ .....+.+..+ ...++.-.++.+.++|..+.+.
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~-~fgeGi~~~g~---~lyv~t~~~~~v~viD~~t~~v 98 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDS-YFGEGLTLLNE---KLYQVVWLKNIGFIYDRRTLSN 98 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTT-CCEEEEEEETT---EEEEEETTCSEEEEEETTTTEE
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCC-cceEEEEEeCC---EEEEEEecCCEEEEEECCCCcE
Confidence 568999998765555553 57899999865433222111111 11234555432 2344445678999999999988
Q ss_pred EEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEecCC------CeEEEEEEcCCCeEEEEE-cCCcEE
Q 048118 162 RATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAG------AVIHALCFSPNRYWLCAA-TEQSIK 234 (303)
Q Consensus 162 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~------~~v~~~~~s~~~~~l~~~-~~~~i~ 234 (303)
..++...... ...++++++.+.++..+++|.++|..+.+.+.++..+ ...+.+.|. ++.+.+.. ..+.|.
T Consensus 99 ~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~ 175 (266)
T 2iwa_A 99 IKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIA 175 (266)
T ss_dssp EEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEE
T ss_pred EEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEE
Confidence 8887533112 2335567776666667899999999998888777542 136678887 66555544 478999
Q ss_pred EEeCCCCceeeeeeec-cccccccccCccceeeccccceeEEEEEEcCCCC-EEEEeecCCeEEEEecc
Q 048118 235 IWDLESKSIVEDLKVD-LKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGS-TLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 235 iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~-~l~~gs~Dg~v~~w~~~ 301 (303)
+.|.++++++..+.+. +........ .........++|+|+++ +++++...+.+.+-++.
T Consensus 176 vID~~tg~V~~~I~~~g~~~~~~~~~--------~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~ 236 (266)
T 2iwa_A 176 RISAKDGTLLGWILLPNLRKKLIDEG--------FRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLH 236 (266)
T ss_dssp EEETTTCCEEEEEECHHHHHHHHHTT--------CTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEE
T ss_pred EEECCCCcEEEEEECCCccccccccc--------ccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEe
Confidence 9999999998877653 110000000 00112346799999987 55667788888887763
No 224
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.86 E-value=2.6e-07 Score=85.06 Aligned_cols=203 Identities=14% Similarity=0.112 Sum_probs=114.3
Q ss_pred EEeCCCCceecccCCEEEEEEeeCCCEEEEE-----eCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEE
Q 048118 69 VVLSSDGQFVGHTKDVLSVAFSIDNRQIVSA-----SRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIV 143 (303)
Q Consensus 69 ~~~~~~~~~~~h~~~i~~i~~~~~~~~l~t~-----~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 143 (303)
+.+.++.--.+|...+..++|+|+|+++|-+ +....|++||+.+........ .......++|+ ++ ..|+
T Consensus 116 vllD~n~la~~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~---~~~k~~~~~Ws-Dg--~~l~ 189 (693)
T 3iuj_A 116 VFLDPNTLSPDGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL---KDVKFSGISWL-GN--EGFF 189 (693)
T ss_dssp EEECGGGGSTTSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE---EEEESCCCEEE-TT--TEEE
T ss_pred EEEehhhccCCCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc---CCceeccEEEe-CC--CEEE
Confidence 3444433223455678889999999988743 333579999986543222110 00112457788 76 3466
Q ss_pred EEeCCC-------------cEEEEECCCcee----EEEEcC-CCCCeeEEEECCCCCEEEEEeC----CCeEEEEeCCCC
Q 048118 144 SASWDR-------------TVKVWNLSNCKL----RATLAG-HTGYVNTVAVSPDGSLCASGGK----DGVILLWDLAEG 201 (303)
Q Consensus 144 ~~~~dg-------------~i~iwd~~~~~~----~~~~~~-~~~~i~~~~~~~~~~~l~~~~~----d~~v~iwd~~~~ 201 (303)
.+..+. .|++|++.+.+. +..... |......+.++|+|++|+.... +..|.++|+.++
T Consensus 190 y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~ 269 (693)
T 3iuj_A 190 YSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQE 269 (693)
T ss_dssp EEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTST
T ss_pred EEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCC
Confidence 666553 389999876542 222222 3345778999999998754432 358999999766
Q ss_pred c-eEEEec-CCCeEEEEEEcCCC-eEEEEEc----CCcEEEEeCCCCce--eeeeeeccccccccccCccceeeccccce
Q 048118 202 K-RLYSLD-AGAVIHALCFSPNR-YWLCAAT----EQSIKIWDLESKSI--VEDLKVDLKTEAEKSEATTATTTIKKKNI 272 (303)
Q Consensus 202 ~-~~~~~~-~~~~v~~~~~s~~~-~~l~~~~----~~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (303)
. ....+. ........ +++++ .++..+. .++|..+|+.++.. ...+.. +..
T Consensus 270 ~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~--------------------~~~ 328 (693)
T 3iuj_A 270 NAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIP--------------------ERQ 328 (693)
T ss_dssp TCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEEC--------------------CCS
T ss_pred CCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEec--------------------CCC
Confidence 3 223332 22222333 44444 4444443 25789999876532 011100 001
Q ss_pred eEEEEEEcCCCCEEEEeec-CC--eEEEEec
Q 048118 273 YCTSLNWSVDGSTLFSGYT-DG--VIRVWGI 300 (303)
Q Consensus 273 ~~~~~~~sp~~~~l~~gs~-Dg--~v~~w~~ 300 (303)
.+. .|+|++.+|+.... || .|++|++
T Consensus 329 ~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~ 357 (693)
T 3iuj_A 329 QVL--TVHSGSGYLFAEYMVDATARVEQFDY 357 (693)
T ss_dssp SCE--EEEEETTEEEEEEEETTEEEEEEECT
T ss_pred CEE--EEEEECCEEEEEEEECCeeEEEEEEC
Confidence 112 67888887765554 44 5777765
No 225
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.77 E-value=2.4e-07 Score=78.23 Aligned_cols=100 Identities=17% Similarity=0.131 Sum_probs=79.3
Q ss_pred CCcEEEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEe----------CCCeEEEEeCCCCceEEEecCC-------
Q 048118 148 DRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGG----------KDGVILLWDLAEGKRLYSLDAG------- 210 (303)
Q Consensus 148 dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----------~d~~v~iwd~~~~~~~~~~~~~------- 210 (303)
++.|.++|..+++...++.....+ . ++++|+|+++.++. .++.|.+||..+.+.+.++...
T Consensus 58 ~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~ 135 (386)
T 3sjl_D 58 VTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLV 135 (386)
T ss_dssp SEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCB
T ss_pred CCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCcccccc
Confidence 679999999999988888765555 3 99999999887665 3678999999999988877432
Q ss_pred -CeEEEEEEcCCCeEEEEEc---CCcEEEEeCCCCceeeeeee
Q 048118 211 -AVIHALCFSPNRYWLCAAT---EQSIKIWDLESKSIVEDLKV 249 (303)
Q Consensus 211 -~~v~~~~~s~~~~~l~~~~---~~~i~iwd~~~~~~~~~~~~ 249 (303)
.....++|+|||.++.++. ++.|.++|+.+++++..+.+
T Consensus 136 g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v 178 (386)
T 3sjl_D 136 GTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDV 178 (386)
T ss_dssp SCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC
T ss_pred CCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEEC
Confidence 2345689999997665543 57899999999999887754
No 226
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.77 E-value=2.1e-06 Score=71.98 Aligned_cols=204 Identities=13% Similarity=0.131 Sum_probs=119.3
Q ss_pred CCEEEEEEeeCCCEEEEEe--CCCcEEEEecCCceeeeee----cCCCCccceEEEEEcCCCCCCEEEEEeC-----CCc
Q 048118 82 KDVLSVAFSIDNRQIVSAS--RDRTIKLWNTLGECKYTIQ----EGDAHTEWVSCVRFSPNTLQPTIVSASW-----DRT 150 (303)
Q Consensus 82 ~~i~~i~~~~~~~~l~t~~--~d~~i~vw~~~~~~~~~~~----~~~~~~~~i~~~~~~~~~~~~~~~~~~~-----dg~ 150 (303)
..+..++++++|+.+++.. .++.++||.+......... ....+...+..+++++++ ..+++-.. +..
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g--~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNG--IVWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSS--EEEEEECHHHHTSCCE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCC--cEEEEcCCCCcCCCCe
Confidence 4678899999999888864 2343556654322111110 111233468899999875 23333222 578
Q ss_pred EEEEECCCceeEEEEcCC------CCCeeEEEECCCCCE-EEEEe---CCCeEEEEeCCCCceEEEecC-----------
Q 048118 151 VKVWNLSNCKLRATLAGH------TGYVNTVAVSPDGSL-CASGG---KDGVILLWDLAEGKRLYSLDA----------- 209 (303)
Q Consensus 151 i~iwd~~~~~~~~~~~~~------~~~i~~~~~~~~~~~-l~~~~---~d~~v~iwd~~~~~~~~~~~~----------- 209 (303)
|.+||+.+++....+... ......++++|++.. +++.. .++.|.+||+.+++....+..
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~ 174 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDL 174 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCC
T ss_pred EEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccce
Confidence 999999988866655422 234688999986544 45555 678999999987765443311
Q ss_pred -------------------CCeEEEEEEcCCCeEEEEE-cC-CcEEEEeCC---CCceeeeeeeccccccccccCcccee
Q 048118 210 -------------------GAVIHALCFSPNRYWLCAA-TE-QSIKIWDLE---SKSIVEDLKVDLKTEAEKSEATTATT 265 (303)
Q Consensus 210 -------------------~~~v~~~~~s~~~~~l~~~-~~-~~i~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (303)
...+..++|+|++..|..+ .. +.|+.++.. .+.+ ..... ... .
T Consensus 175 ~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~-~~~~~-------~~~-----~ 241 (343)
T 2qe8_A 175 VIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQL-TDAEL-------GSK-----I 241 (343)
T ss_dssp EETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTC-CHHHH-------HTT-----C
T ss_pred eECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCC-Chhhh-------hcc-----e
Confidence 0125779999998655443 33 355555431 1100 00000 000 0
Q ss_pred eccccceeEEEEEEcCCCCEEEEeecCCeEEEEec
Q 048118 266 TIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 300 (303)
Q Consensus 266 ~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~ 300 (303)
...+.......++++++|.++++...++.|.+||.
T Consensus 242 ~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 242 ERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITS 276 (343)
T ss_dssp EEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEET
T ss_pred EecccCCCCceEEECCCCCEEEEccCCCeEEEEEC
Confidence 00001112345888999999999999999999987
No 227
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.73 E-value=1e-05 Score=64.18 Aligned_cols=190 Identities=8% Similarity=0.011 Sum_probs=118.5
Q ss_pred EEEEEeeCCCEEEEEeCCC--cEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeE
Q 048118 85 LSVAFSIDNRQIVSASRDR--TIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLR 162 (303)
Q Consensus 85 ~~i~~~~~~~~l~t~~~d~--~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~ 162 (303)
..+.|+ ++.++.+.+.++ .|+++|+.+............ ..-..+....+ ...+..-.++.+.+||.++.+..
T Consensus 46 qGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~-~FgeGit~~g~---~ly~ltw~~~~v~v~D~~t~~~~ 120 (262)
T 3nol_A 46 EGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKR-YFGEGISDWKD---KIVGLTWKNGLGFVWNIRNLRQV 120 (262)
T ss_dssp EEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTT-CCEEEEEEETT---EEEEEESSSSEEEEEETTTCCEE
T ss_pred ceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCc-cceeEEEEeCC---EEEEEEeeCCEEEEEECccCcEE
Confidence 567887 677777777766 899999865433222211111 11123444332 23333345789999999999988
Q ss_pred EEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEecCC------CeEEEEEEcCCCeEEEEE-cCCcEEE
Q 048118 163 ATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAG------AVIHALCFSPNRYWLCAA-TEQSIKI 235 (303)
Q Consensus 163 ~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~------~~v~~~~~s~~~~~l~~~-~~~~i~i 235 (303)
.++.... .-..+ .++++.|+.+..+++|.++|..+.+.+.++... ..++.+.|. +|.+.+.. .++.|.+
T Consensus 121 ~ti~~~~-eG~gl--t~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~v 196 (262)
T 3nol_A 121 RSFNYDG-EGWGL--THNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVR 196 (262)
T ss_dssp EEEECSS-CCCCE--EECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEE
T ss_pred EEEECCC-CceEE--ecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEE
Confidence 8887532 21333 356776666656789999999999888776542 234567776 56655554 5789999
Q ss_pred EeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeec
Q 048118 236 WDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYT 291 (303)
Q Consensus 236 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~ 291 (303)
.|.++++++..+.+.-....... . .......+.|+|+|+++.|++.+.
T Consensus 197 IDp~tG~V~~~Id~~~L~~~~~~-~-------~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 197 IDPETGKVTGIIDLNGILAEAGP-L-------PSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp ECTTTCBEEEEEECTTGGGGSCS-C-------CSSCCCEEEEEEETTTTEEEEEET
T ss_pred EECCCCcEEEEEECCcCcccccc-c-------cCcCCceEEEEEcCCCCEEEEECC
Confidence 99999999988776421110000 0 011123478999999887776654
No 228
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.71 E-value=5e-06 Score=65.96 Aligned_cols=188 Identities=6% Similarity=-0.020 Sum_probs=119.9
Q ss_pred EEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEE
Q 048118 85 LSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRAT 164 (303)
Q Consensus 85 ~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~ 164 (303)
..+.|+ ++.+..+.+.++.|+++|+.+....... .... ..-..+.+..+ ...+..-.++.+.+||.++.+.+.+
T Consensus 58 qGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~-~FgeGit~~g~---~Ly~ltw~~~~v~V~D~~Tl~~~~t 131 (268)
T 3nok_A 58 QGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGN-IFAEGLASDGE---RLYQLTWTEGLLFTWSGMPPQRERT 131 (268)
T ss_dssp EEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTT-CCEEEEEECSS---CEEEEESSSCEEEEEETTTTEEEEE
T ss_pred ceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCC-cceeEEEEeCC---EEEEEEccCCEEEEEECCcCcEEEE
Confidence 567776 4667778888899999998643322211 1111 11123555432 2344445688999999999998888
Q ss_pred EcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEecCC------CeEEEEEEcCCCeEEEEE-cCCcEEEEe
Q 048118 165 LAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAG------AVIHALCFSPNRYWLCAA-TEQSIKIWD 237 (303)
Q Consensus 165 ~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~------~~v~~~~~s~~~~~l~~~-~~~~i~iwd 237 (303)
+.... .-..++ ++++.|+.+..+++|.++|..+.+.+.++... ..++.+.|. +|.+.+.. ..+.|.+.|
T Consensus 132 i~~~~-eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vID 207 (268)
T 3nok_A 132 TRYSG-EGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEID 207 (268)
T ss_dssp EECSS-CCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEEC
T ss_pred EeCCC-ceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEe
Confidence 87532 223444 56777777767899999999999888777532 245677777 56555554 478999999
Q ss_pred CCCCceeeeeeec-cccccccccCccceeeccccceeEEEEEEcCCCCEEEEee
Q 048118 238 LESKSIVEDLKVD-LKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGY 290 (303)
Q Consensus 238 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs 290 (303)
.++++++..+.+. +....... ........+.|+|.|+++.|++.+
T Consensus 208 p~TG~V~~~Idl~~L~~~~~~~--------~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 208 PATGTVVGVIDASALTRAVAGQ--------VTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp TTTCBEEEEEECHHHHHHHTTT--------CCCTTCCEEEEEECTTTCCEEEEE
T ss_pred CCCCcEEEEEECCCCccccccc--------ccCcCCceEEEEEcCCCCEEEEeC
Confidence 9999999887764 11111000 001112347899999876555444
No 229
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.70 E-value=1.3e-06 Score=74.15 Aligned_cols=94 Identities=11% Similarity=0.012 Sum_probs=73.7
Q ss_pred cEEEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEe----------CCCeEEEEeCCCCceEEEecCC--------C
Q 048118 150 TVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGG----------KDGVILLWDLAEGKRLYSLDAG--------A 211 (303)
Q Consensus 150 ~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----------~d~~v~iwd~~~~~~~~~~~~~--------~ 211 (303)
.|.++|..+++...++.....+ .+.++|+++++.++. .++.|.++|..+.+.+..+... .
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~ 125 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGP 125 (373)
T ss_pred EEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCC
Confidence 7899999999888777654444 899999999988775 3678999999988877766432 2
Q ss_pred eEEEEEEcCCCeEEEEEc---CCcEEEEeCCCCceeee
Q 048118 212 VIHALCFSPNRYWLCAAT---EQSIKIWDLESKSIVED 246 (303)
Q Consensus 212 ~v~~~~~s~~~~~l~~~~---~~~i~iwd~~~~~~~~~ 246 (303)
....++|+|++.+|.++. ++.|.++| ++++++..
T Consensus 126 ~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~ 162 (373)
T 2mad_H 126 YSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQ 162 (373)
T ss_pred CccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeE
Confidence 345789999998776553 46799999 99888765
No 230
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.70 E-value=1.6e-05 Score=67.24 Aligned_cols=224 Identities=12% Similarity=0.151 Sum_probs=124.7
Q ss_pred cEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEeeCCCEEEEEeCCCcEEEE
Q 048118 29 DMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLW 108 (303)
Q Consensus 29 ~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~~~~~l~t~~~d~~i~vw 108 (303)
+.+..++.++.|..+|..+++...... +..... ........+.. ....++..++.++.++.|..+
T Consensus 54 ~~v~~~~~~g~v~a~d~~tG~~~W~~~---~~~~~~-----------~~~~~~~~~~~-~~~~~~~~v~v~~~~g~l~a~ 118 (376)
T 3q7m_A 54 NVVYAADRAGLVKALNADDGKEIWSVS---LAEKDG-----------WFSKEPALLSG-GVTVSGGHVYIGSEKAQVYAL 118 (376)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEE---CCC--------------CCSCCCCCEEE-EEEEETTEEEEEETTSEEEEE
T ss_pred CEEEEEcCCCeEEEEEccCCceeeeec---Cccccc-----------cccccCccccc-CceEeCCEEEEEcCCCEEEEE
Confidence 567778888899999986554322111 000000 00000111221 112235567778889999999
Q ss_pred ecC-CceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEEEcCCCCCe-----eEEEECCCCC
Q 048118 109 NTL-GECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYV-----NTVAVSPDGS 182 (303)
Q Consensus 109 ~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i-----~~~~~~~~~~ 182 (303)
|.. +...+......... ...... + ..++.++.++.+..+|..+++............ ...... +.
T Consensus 119 d~~tG~~~W~~~~~~~~~---~~p~~~-~---~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~ 189 (376)
T 3q7m_A 119 NTSDGTVAWQTKVAGEAL---SRPVVS-D---GLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FG 189 (376)
T ss_dssp ETTTCCEEEEEECSSCCC---SCCEEE-T---TEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TT
T ss_pred ECCCCCEEEEEeCCCceE---cCCEEE-C---CEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CC
Confidence 975 33333332211100 011111 1 357778889999999999888776654422111 112222 35
Q ss_pred EEEEEeCCCeEEEEeCCCCceEEEecCCCeE-----E---EEEEc---CCCeEEEEEcCCcEEEEeCCCCceeeeeeecc
Q 048118 183 LCASGGKDGVILLWDLAEGKRLYSLDAGAVI-----H---ALCFS---PNRYWLCAATEQSIKIWDLESKSIVEDLKVDL 251 (303)
Q Consensus 183 ~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~v-----~---~~~~s---~~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~ 251 (303)
.++.++.++.+..+|..+++.+......... . .+... .++.+++.+.++.+..+|.++++.+.......
T Consensus 190 ~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~ 269 (376)
T 3q7m_A 190 AAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGS 269 (376)
T ss_dssp EEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCCC
T ss_pred EEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCCC
Confidence 6777888999999999999988766432110 0 01011 14566666778999999999988765433110
Q ss_pred ccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEec
Q 048118 252 KTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 300 (303)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~ 300 (303)
...+. .++..|.+++.+|.+..+|.
T Consensus 270 ----------------------~~~~~--~~~~~l~~~~~~g~l~~~d~ 294 (376)
T 3q7m_A 270 ----------------------VNDFI--VDGNRIYLVDQNDRVMALTI 294 (376)
T ss_dssp ----------------------EEEEE--EETTEEEEEETTCCEEEEET
T ss_pred ----------------------CCCce--EECCEEEEEcCCCeEEEEEC
Confidence 01111 23556777777777777775
No 231
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.67 E-value=7.6e-05 Score=59.90 Aligned_cols=204 Identities=13% Similarity=0.065 Sum_probs=121.4
Q ss_pred ceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEeeCCCEE
Q 048118 17 MVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSIDNRQI 96 (303)
Q Consensus 17 ~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~~~~~l 96 (303)
.+..+++++.+..++++-..++.|..++....... . + +. ........+++++++..+
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~-----~-----------~-~~------~~~~~p~~ia~d~~~~~l 93 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPT-----T-----------I-IR------QDLGSPEGIALDHLGRTI 93 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCE-----E-----------E-EC------TTCCCEEEEEEETTTTEE
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcE-----E-----------E-EE------CCCCCccEEEEEecCCeE
Confidence 35678888866667777777788888887432110 0 0 00 011356789999876554
Q ss_pred E-EEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeC---CCcEEEEECCCceeEEEEcCCCCCe
Q 048118 97 V-SASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASW---DRTVKVWNLSNCKLRATLAGHTGYV 172 (303)
Q Consensus 97 ~-t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~i 172 (303)
+ +-...+.|.+++..+.....+... .......++++|+. ..+..+.. .+.|..+++................
T Consensus 94 yv~d~~~~~I~~~~~~g~~~~~~~~~--~~~~P~~i~vd~~~--g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P 169 (267)
T 1npe_A 94 FWTDSQLDRIEVAKMDGTQRRVLFDT--GLVNPRGIVTDPVR--GNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLP 169 (267)
T ss_dssp EEEETTTTEEEEEETTSCSCEEEECS--SCSSEEEEEEETTT--TEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCE
T ss_pred EEEECCCCEEEEEEcCCCCEEEEEEC--CCCCccEEEEeeCC--CEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCC
Confidence 4 445567888888765332222211 11345789999854 23433333 3678888875433222222223456
Q ss_pred eEEEECCCCCEE-EEEeCCCeEEEEeCCCCceEEEecCCCeEEEEEEcCCCeEEEEE-cCCcEEEEeCCCCceeeeee
Q 048118 173 NTVAVSPDGSLC-ASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAA-TEQSIKIWDLESKSIVEDLK 248 (303)
Q Consensus 173 ~~~~~~~~~~~l-~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~~~i~iwd~~~~~~~~~~~ 248 (303)
..++++|++..| ++-...++|.++|+.................++.. ++.++++. ..+.|..+|..+++.+..+.
T Consensus 170 ~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i~ 246 (267)
T 1npe_A 170 NGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTFH 246 (267)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEEC
T ss_pred cEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCceEEEc
Confidence 889999987665 44456789999998754433223333334566665 34444443 46899999999888776554
No 232
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.63 E-value=3.8e-06 Score=74.22 Aligned_cols=198 Identities=11% Similarity=0.107 Sum_probs=122.3
Q ss_pred eCCCEEEEEeC-CCcEEEEecCCceeeeeecCCCCccceEEEEE-c-CCCCCCEEEEEe------------------CCC
Q 048118 91 IDNRQIVSASR-DRTIKLWNTLGECKYTIQEGDAHTEWVSCVRF-S-PNTLQPTIVSAS------------------WDR 149 (303)
Q Consensus 91 ~~~~~l~t~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~-~-~~~~~~~~~~~~------------------~dg 149 (303)
++|+++..+.. ++.|.+.|+.......+... +....+..+++ . |++ .++++++ .++
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~i-p~g~~phg~~~~~~p~~--~~v~~~~~~~~p~~~dg~~l~~~~~~~~ 175 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEI-PNAKGIHGLRPQKWPRS--NYVFCNGEDETPLVNDGTNMEDVANYVN 175 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEEC-SSCCSEEEEEECCSSBC--SEEEEEECSCEESSCSSSSTTCGGGEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeC-CCCCCCcceeeeecCCC--cEEEEecccccccCCCCcccccccccCc
Confidence 37777665554 55688889865432222221 11223667776 4 665 3455553 245
Q ss_pred cEEEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCC--------------------------------------
Q 048118 150 TVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDG-------------------------------------- 191 (303)
Q Consensus 150 ~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~-------------------------------------- 191 (303)
.+-+.|..+.+...++.--. .-..++++|+|+++.+++.+.
T Consensus 176 ~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~ 254 (595)
T 1fwx_A 176 VFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELN 254 (595)
T ss_dssp EEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEET
T ss_pred eEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEEC
Confidence 78899999988777765322 345678999999988887543
Q ss_pred eEEEEeCCC--Cce-EEEecCCCeEEEEEEcCCCeEEEEEc--CCcEEEEeCCCCceeeeeeeccccccccccCccceee
Q 048118 192 VILLWDLAE--GKR-LYSLDAGAVIHALCFSPNRYWLCAAT--EQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTT 266 (303)
Q Consensus 192 ~v~iwd~~~--~~~-~~~~~~~~~v~~~~~s~~~~~l~~~~--~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (303)
.|.|.|.++ ++. +..+..+.....+.++|||.++.++. ++.|.++|+++.+....-++..... ....
T Consensus 255 ~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~--------v~~~ 326 (595)
T 1fwx_A 255 GVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSA--------VVAE 326 (595)
T ss_dssp TEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGG--------EEEC
T ss_pred cEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccc--------eEEE
Confidence 467777776 444 45555455566789999998776664 6789999997543211101100000 0000
Q ss_pred ccccceeEEEEEEcCCCCEEEEeecCCeEEEEecc
Q 048118 267 IKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 267 ~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~ 301 (303)
.. .......++|+|+|....+..-|+.|.+||+.
T Consensus 327 v~-vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~ 360 (595)
T 1fwx_A 327 PE-LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIE 360 (595)
T ss_dssp CB-CCSCEEEEEECTTSEEEEEETTTTEEEEEEHH
T ss_pred cC-CCCCcceEEECCCCeEEEEEecCCcEEEEEhh
Confidence 00 12234678999999555677889999999985
No 233
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.61 E-value=7e-05 Score=58.83 Aligned_cols=191 Identities=13% Similarity=0.027 Sum_probs=117.9
Q ss_pred EEEEEEeeCCCEEEEEeCC--CcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCcee
Q 048118 84 VLSVAFSIDNRQIVSASRD--RTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKL 161 (303)
Q Consensus 84 i~~i~~~~~~~~l~t~~~d--~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~ 161 (303)
...+.|++ +.++.+.+.+ ..|+.+|+.+............. .-..+....+ ......-.++.+.+||.++.+.
T Consensus 23 tqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~-fgeGi~~~~~---~ly~ltw~~~~v~v~D~~tl~~ 97 (243)
T 3mbr_X 23 TEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPY-FGAGIVAWRD---RLIQLTWRNHEGFVYDLATLTP 97 (243)
T ss_dssp EEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTC-CEEEEEEETT---EEEEEESSSSEEEEEETTTTEE
T ss_pred cccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCc-ceeEEEEeCC---EEEEEEeeCCEEEEEECCcCcE
Confidence 45788876 5666666665 48999998654332222111111 1123444332 2333445678999999999998
Q ss_pred EEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEecCC------CeEEEEEEcCCCeEEEEE-cCCcEE
Q 048118 162 RATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAG------AVIHALCFSPNRYWLCAA-TEQSIK 234 (303)
Q Consensus 162 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~------~~v~~~~~s~~~~~l~~~-~~~~i~ 234 (303)
..++.... .-..++ ++++.|..+..+++|.++|..+.+.+.++... ..++.+.+. ++.+.+.. ..+.|.
T Consensus 98 ~~ti~~~~-~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~ 173 (243)
T 3mbr_X 98 RARFRYPG-EGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIA 173 (243)
T ss_dssp EEEEECSS-CCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEE
T ss_pred EEEEeCCC-CceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEE
Confidence 88887533 224444 45666655556889999999998888777542 245667776 55555554 578999
Q ss_pred EEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEee
Q 048118 235 IWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGY 290 (303)
Q Consensus 235 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs 290 (303)
+.|.++++++..+.+.-....... .. .......+.|+++|+++.|++.+
T Consensus 174 vIDp~tG~V~~~idl~~l~~~~~~-~~------~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 174 RIDPASGKVVAWIDLQALVPDADA-LT------DSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp EECTTTCBEEEEEECGGGSTTTTS-CC------CTTSSCEEEEEEETTTTEEEEEE
T ss_pred EEECCCCCEEEEEECCcCcccccc-cc------CCcCCceEEEEEcCCCCEEEEEC
Confidence 999999999988775421110000 00 01112347899999887666555
No 234
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.60 E-value=7.2e-06 Score=72.51 Aligned_cols=90 Identities=13% Similarity=0.138 Sum_probs=62.9
Q ss_pred cEEEEECCC--cee-EEEEcCCCCCeeEEEECCCCCEEEEEe-CCCeEEEEeCCCCc------------eEEEecCCCeE
Q 048118 150 TVKVWNLSN--CKL-RATLAGHTGYVNTVAVSPDGSLCASGG-KDGVILLWDLAEGK------------RLYSLDAGAVI 213 (303)
Q Consensus 150 ~i~iwd~~~--~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~v~iwd~~~~~------------~~~~~~~~~~v 213 (303)
.|.+.|.++ ++. ...+... ....++.++|||+++++++ .+.+|.++|+.+.+ .+..+..+...
T Consensus 255 ~V~VID~~~~~~~~~~~~Ipvg-~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP 333 (595)
T 1fwx_A 255 GVKVVDGRKEASSLFTRYIPIA-NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGP 333 (595)
T ss_dssp TEEEEECSGGGCCSSEEEEEEE-SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCE
T ss_pred cEEEEeCcccCCceeEEEEecC-CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCc
Confidence 366677765 333 3334321 2456789999999876665 58899999998653 34556667778
Q ss_pred EEEEEcCCCeEEEE-EcCCcEEEEeCCC
Q 048118 214 HALCFSPNRYWLCA-ATEQSIKIWDLES 240 (303)
Q Consensus 214 ~~~~~s~~~~~l~~-~~~~~i~iwd~~~ 240 (303)
..++|+|+|...++ .-+++|.+||++.
T Consensus 334 ~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 334 LHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp EEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred ceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 88999999943233 3489999999876
No 235
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.59 E-value=1.5e-05 Score=73.09 Aligned_cols=75 Identities=13% Similarity=0.145 Sum_probs=50.7
Q ss_pred EEEEcCCCCCCEEEEEeCCC-------------------cEEEEECCCceeEEEEcC--CC-------CCeeEEEECCCC
Q 048118 130 CVRFSPNTLQPTIVSASWDR-------------------TVKVWNLSNCKLRATLAG--HT-------GYVNTVAVSPDG 181 (303)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~dg-------------------~i~iwd~~~~~~~~~~~~--~~-------~~i~~~~~~~~~ 181 (303)
.+.++|+. ..++.+..++ .|..+|.++++.+..++. |. .+........+|
T Consensus 239 ~~~~d~~~--~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G 316 (689)
T 1yiq_A 239 SFAYDPEL--NLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDG 316 (689)
T ss_dssp CEEEETTT--TEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETT
T ss_pred ceeEcCCC--CEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCC
Confidence 45677654 3566666665 399999999998877654 21 111112222245
Q ss_pred C---EEEEEeCCCeEEEEeCCCCceEEE
Q 048118 182 S---LCASGGKDGVILLWDLAEGKRLYS 206 (303)
Q Consensus 182 ~---~l~~~~~d~~v~iwd~~~~~~~~~ 206 (303)
+ .++.++.+|.++++|.++++.+..
T Consensus 317 ~~~~~v~~~~~~G~l~~lD~~tG~~l~~ 344 (689)
T 1yiq_A 317 KPRKVLMQAPKNGFFYVIDRATGELLSA 344 (689)
T ss_dssp EEEEEEEECCTTSEEEEEETTTCCEEEE
T ss_pred cEEEEEEEECCCCeEEEEECCCCCEecc
Confidence 4 788899999999999999998744
No 236
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.59 E-value=1.2e-05 Score=73.54 Aligned_cols=131 Identities=15% Similarity=0.209 Sum_probs=87.0
Q ss_pred cEEEEECCCceeEEEEcC--CC-------CCeeEEEECCCC---CEEEEEeCCCeEEEEeCCCCceEEEecCC-------
Q 048118 150 TVKVWNLSNCKLRATLAG--HT-------GYVNTVAVSPDG---SLCASGGKDGVILLWDLAEGKRLYSLDAG------- 210 (303)
Q Consensus 150 ~i~iwd~~~~~~~~~~~~--~~-------~~i~~~~~~~~~---~~l~~~~~d~~v~iwd~~~~~~~~~~~~~------- 210 (303)
.|..+|.++++.+..++. |. .....+....+| ..++.++.+|.+.++|.++++.+..+...
T Consensus 284 sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~ 363 (677)
T 1kb0_A 284 SIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASG 363 (677)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEE
T ss_pred EEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccc
Confidence 599999999988776653 21 111222333366 67889999999999999999988765321
Q ss_pred -----CeE------------------------EEEEEcCCCeEEEE-Ec-------------------------------
Q 048118 211 -----AVI------------------------HALCFSPNRYWLCA-AT------------------------------- 229 (303)
Q Consensus 211 -----~~v------------------------~~~~~s~~~~~l~~-~~------------------------------- 229 (303)
.++ ..++++|++.++.+ ..
T Consensus 364 ~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g 443 (677)
T 1kb0_A 364 YDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTA 443 (677)
T ss_dssp ECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCC
T ss_pred cCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccc
Confidence 111 14678887554433 21
Q ss_pred ------------CCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEE
Q 048118 230 ------------EQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRV 297 (303)
Q Consensus 230 ------------~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~ 297 (303)
.+.|..||+++++++...+.... .....+++.+.++++|+.||.+++
T Consensus 444 ~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~---------------------~~~g~~~~~g~~v~~g~~dg~l~a 502 (677)
T 1kb0_A 444 KFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSP---------------------WNGGTLTTAGNVVFQGTADGRLVA 502 (677)
T ss_dssp EEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSS---------------------CCCCEEEETTTEEEEECTTSEEEE
T ss_pred cccccccCCCCCccEEEEEeCCCCcEEeecCCCCC---------------------CcCcceEeCCCEEEEECCCCcEEE
Confidence 16789999999888766543110 011234567788999999999999
Q ss_pred Eecc
Q 048118 298 WGIG 301 (303)
Q Consensus 298 w~~~ 301 (303)
||+.
T Consensus 503 ~D~~ 506 (677)
T 1kb0_A 503 YHAA 506 (677)
T ss_dssp EETT
T ss_pred EECC
Confidence 9974
No 237
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.57 E-value=2.9e-06 Score=72.87 Aligned_cols=99 Identities=16% Similarity=0.131 Sum_probs=79.5
Q ss_pred CcEEEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEe----------CCCeEEEEeCCCCceEEEecCC--------
Q 048118 149 RTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGG----------KDGVILLWDLAEGKRLYSLDAG-------- 210 (303)
Q Consensus 149 g~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----------~d~~v~iwd~~~~~~~~~~~~~-------- 210 (303)
+.|.++|..+++...++.....+ .+.++|+++++.++. .++.|.++|..+++.+.++...
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g 176 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVG 176 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBS
T ss_pred CeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccC
Confidence 69999999999998888765555 899999999887765 4679999999999988776432
Q ss_pred CeEEEEEEcCCCeEEEEEc---CCcEEEEeCCCCceeeeeee
Q 048118 211 AVIHALCFSPNRYWLCAAT---EQSIKIWDLESKSIVEDLKV 249 (303)
Q Consensus 211 ~~v~~~~~s~~~~~l~~~~---~~~i~iwd~~~~~~~~~~~~ 249 (303)
.....+.|+|++.++.++. ++.|.+.|+.+++++..+.+
T Consensus 177 ~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v 218 (426)
T 3c75_H 177 TYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDV 218 (426)
T ss_dssp CCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC
T ss_pred CCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEc
Confidence 2345688999997776653 57899999999999887765
No 238
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.55 E-value=8.8e-06 Score=74.53 Aligned_cols=163 Identities=12% Similarity=0.116 Sum_probs=103.4
Q ss_pred EEEEeeCCCEEEEEeCCC-------------------cEEEEecCC-ceeeeeecCCCCc-------cceEEEEEcCCCC
Q 048118 86 SVAFSIDNRQIVSASRDR-------------------TIKLWNTLG-ECKYTIQEGDAHT-------EWVSCVRFSPNTL 138 (303)
Q Consensus 86 ~i~~~~~~~~l~t~~~d~-------------------~i~vw~~~~-~~~~~~~~~~~~~-------~~i~~~~~~~~~~ 138 (303)
.+++++++.+++.+..++ .|..+|..+ +..+..+.. .+. .....+....++.
T Consensus 247 ~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~-~~d~wd~~~~~~p~l~~~~~dG~ 325 (677)
T 1kb0_A 247 SMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQET-PGDNWDYTSTQPMILADIKIAGK 325 (677)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESS-TTCCSCCCCCSCCEEEEEEETTE
T ss_pred ceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecC-CCcccccccCCCcEEEecccCCc
Confidence 567888888887776653 477777653 333333321 111 1111122222221
Q ss_pred -CCEEEEEeCCCcEEEEECCCceeEEEEcCCC-----------CCe------------------------eEEEECCCCC
Q 048118 139 -QPTIVSASWDRTVKVWNLSNCKLRATLAGHT-----------GYV------------------------NTVAVSPDGS 182 (303)
Q Consensus 139 -~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~-----------~~i------------------------~~~~~~~~~~ 182 (303)
...++.++.+|.++++|..+++.+..+.... .++ ..++++|++.
T Consensus 326 ~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~ 405 (677)
T 1kb0_A 326 PRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTG 405 (677)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTT
T ss_pred EeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCC
Confidence 1357888999999999999998776543211 001 1468889888
Q ss_pred EEEEEeC-------------------------------------------CCeEEEEeCCCCceEEEecCCCeEEEEEEc
Q 048118 183 LCASGGK-------------------------------------------DGVILLWDLAEGKRLYSLDAGAVIHALCFS 219 (303)
Q Consensus 183 ~l~~~~~-------------------------------------------d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s 219 (303)
++.+... .+.|..||+.+++.+.++.....+....+.
T Consensus 406 ~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~ 485 (677)
T 1kb0_A 406 LVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLT 485 (677)
T ss_dssp EEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEE
T ss_pred EEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceE
Confidence 8776543 278999999999988877554333333333
Q ss_pred C-CCeEEEEEcCCcEEEEeCCCCceeeeeee
Q 048118 220 P-NRYWLCAATEQSIKIWDLESKSIVEDLKV 249 (303)
Q Consensus 220 ~-~~~~l~~~~~~~i~iwd~~~~~~~~~~~~ 249 (303)
. ++.++.++.++.+++||.++++++..+.+
T Consensus 486 ~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~ 516 (677)
T 1kb0_A 486 TAGNVVFQGTADGRLVAYHAATGEKLWEAPT 516 (677)
T ss_dssp ETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred eCCCEEEEECCCCcEEEEECCCCceeeeeeC
Confidence 3 45566666799999999999999887764
No 239
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.51 E-value=2.4e-05 Score=64.65 Aligned_cols=182 Identities=14% Similarity=0.136 Sum_probs=110.1
Q ss_pred EEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEE
Q 048118 85 LSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRAT 164 (303)
Q Consensus 85 ~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~ 164 (303)
.++...+++. +..++.++.|..+|..+........ ....+.++...+++ .+..++ +.+..+| .+++....
T Consensus 140 ~~~~~~~~g~-l~vgt~~~~l~~~d~~g~~~~~~~~---~~~~~~~~~~d~~g---~l~v~t--~~l~~~d-~~g~~~~~ 209 (330)
T 3hxj_A 140 ATPIVSEDGT-IYVGSNDNYLYAINPDGTEKWRFKT---NDAITSAASIGKDG---TIYFGS--DKVYAIN-PDGTEKWN 209 (330)
T ss_dssp SCCEECTTSC-EEEECTTSEEEEECTTSCEEEEEEC---SSCCCSCCEECTTC---CEEEES--SSEEEEC-TTSCEEEE
T ss_pred eeeEEcCCCE-EEEEcCCCEEEEECCCCCEeEEEec---CCCceeeeEEcCCC---EEEEEe--CEEEEEC-CCCcEEEE
Confidence 3444555555 5557777889999876433332221 12234445555543 244455 8899999 66666656
Q ss_pred EcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEecCC-CeEEEEEEcCCCeEEEEEcCCcEEEEeCCCCce
Q 048118 165 LAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAG-AVIHALCFSPNRYWLCAATEQSIKIWDLESKSI 243 (303)
Q Consensus 165 ~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~ 243 (303)
+......+.++...+++... .++.++.+..+|. +++.+..+... ..+..+...+++.+.+++.++.|..+|. +++.
T Consensus 210 ~~~~~~~~~~~~~~~~g~l~-v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~-~g~~ 286 (330)
T 3hxj_A 210 FYAGYWTVTRPAISEDGTIY-VTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTDTIYFGSYDGHLYAINP-DGTE 286 (330)
T ss_dssp ECCSSCCCSCCEECTTSCEE-EEETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTSCEEEECTTCEEEEECT-TSCE
T ss_pred EccCCcceeceEECCCCeEE-EEcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCCeEEEecCCCCEEEECC-CCcE
Confidence 65555678888888887654 4666788888874 55555554332 2233455566777777777889999996 5665
Q ss_pred eeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEec
Q 048118 244 VEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 300 (303)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~ 300 (303)
+...... ...+.++...+++. |..|+.+|.+++...
T Consensus 287 ~~~~~~~--------------------~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~ 322 (330)
T 3hxj_A 287 KWNFETG--------------------SWIIATPVIDENGT-IYFGTRNGKFYALFN 322 (330)
T ss_dssp EEEEECS--------------------SCCCSCCEECTTCC-EEEECTTSCEEEEEC
T ss_pred EEEEEcC--------------------CccccceEEcCCCE-EEEEcCCCeEEEEec
Confidence 5433221 00112344445554 666899999988764
No 240
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.49 E-value=2.8e-05 Score=65.73 Aligned_cols=181 Identities=14% Similarity=0.140 Sum_probs=107.9
Q ss_pred CCEEEEEeCCCcEEEEecCC-ceeeeeecCCCC-cc---ceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEEEcC
Q 048118 93 NRQIVSASRDRTIKLWNTLG-ECKYTIQEGDAH-TE---WVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAG 167 (303)
Q Consensus 93 ~~~l~t~~~d~~i~vw~~~~-~~~~~~~~~~~~-~~---~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~ 167 (303)
+..++.+..++.+..+|... ...+........ .. .+..+...|-.....+..++.++.+..+|..+++.......
T Consensus 188 ~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~ 267 (376)
T 3q7m_A 188 FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKREL 267 (376)
T ss_dssp TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECC
T ss_pred CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccC
Confidence 34677778888899998743 333322211100 00 00000011100123567778899999999998887665542
Q ss_pred CCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEecC-C-CeEEEEEEcCCCeEEEEEcCCcEEEEeCCCCceee
Q 048118 168 HTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDA-G-AVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVE 245 (303)
Q Consensus 168 ~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~-~-~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~ 245 (303)
.....+.. ++..+..++.++.+..+|..+++.+..... . ......... ++.+++.+.+|.++++|.++++++.
T Consensus 268 --~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~-~~~l~v~~~~g~l~~~d~~tG~~~~ 342 (376)
T 3q7m_A 268 --GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLY-NGNLVVGDSEGYLHWINVEDGRFVA 342 (376)
T ss_dssp --CCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEEE-TTEEEEECTTSEEEEEETTTCCEEE
T ss_pred --CCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEEE-CCEEEEEeCCCeEEEEECCCCcEEE
Confidence 23444444 356777788899999999999998876641 1 112222222 5667777778999999999998876
Q ss_pred eeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEe
Q 048118 246 DLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWG 299 (303)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~ 299 (303)
....... .. . .... ..+..|.+++.||.|..|+
T Consensus 343 ~~~~~~~------~~------------~-~~~~--~~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 343 QQKVDSS------GF------------Q-TEPV--AADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp EEECCTT------CB------------C-SCCE--EETTEEEEEBTTSCEEEEE
T ss_pred EEecCCC------cc------------e-eCCE--EECCEEEEEeCCCEEEEEe
Confidence 5443100 00 0 0011 1256788899999999987
No 241
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.42 E-value=4.6e-05 Score=62.89 Aligned_cols=141 Identities=12% Similarity=0.087 Sum_probs=94.2
Q ss_pred CCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEEEcCCCCCe
Q 048118 93 NRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYV 172 (303)
Q Consensus 93 ~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i 172 (303)
+..+..++.++.|..+|..+...+.... ....+.++...+++ .+..++.++.+..+|.. ++....+......+
T Consensus 107 ~~~l~v~t~~~~l~~~d~~g~~~~~~~~---~~~~~~~~~~~~~g---~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~ 179 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTDGTEKWRFKT---KKAIYATPIVSEDG---TIYVGSNDNYLYAINPD-GTEKWRFKTNDAIT 179 (330)
T ss_dssp TTEEEEECTTSEEEEECTTSCEEEEEEC---SSCCCSCCEECTTS---CEEEECTTSEEEEECTT-SCEEEEEECSSCCC
T ss_pred CCEEEEEecCCEEEEEcCCCCEEEEEcC---CCceeeeeEEcCCC---EEEEEcCCCEEEEECCC-CCEeEEEecCCCce
Confidence 4456677788889999876433333221 22223444455443 46667888999999988 76665565555667
Q ss_pred eEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEecC-CCeEEEEEEcCCCeEEEEEcCCcEEEEeCCCCceee
Q 048118 173 NTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDA-GAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVE 245 (303)
Q Consensus 173 ~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~ 245 (303)
.++...+++..++.. +.+..+| .+++.+..... ...+.++...+++.+.+++.++.|..+|. +++.+.
T Consensus 180 ~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~-~g~~~~ 248 (330)
T 3hxj_A 180 SAASIGKDGTIYFGS---DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINP-DGTEKW 248 (330)
T ss_dssp SCCEECTTCCEEEES---SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEECT-TSCEEE
T ss_pred eeeEEcCCCEEEEEe---CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeEEEEcCCCeEEEECC-CCCEeE
Confidence 778887788765544 7899999 77776666543 34566777888888777777889999985 444443
No 242
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.30 E-value=0.00039 Score=57.38 Aligned_cols=154 Identities=12% Similarity=0.083 Sum_probs=94.1
Q ss_pred EEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCC-----------------CccceEEEEEcC-CCCCCEEEEE
Q 048118 84 VLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDA-----------------HTEWVSCVRFSP-NTLQPTIVSA 145 (303)
Q Consensus 84 i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~-----------------~~~~i~~~~~~~-~~~~~~~~~~ 145 (303)
..++++++++.++.++..++.|..|+..+.....+..... ....+..+++.+ ++ .+..+
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g---~l~v~ 97 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNN---QLYIV 97 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT---EEEEE
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCC---cEEEE
Confidence 4467888898877788888999999875432222111000 012367888887 43 45555
Q ss_pred eCCCcEEEEECCCceeEEEE---cC-CCCCeeEEEECC-CCCEEEEEeC-----------------CCeEEEEeCCCCce
Q 048118 146 SWDRTVKVWNLSNCKLRATL---AG-HTGYVNTVAVSP-DGSLCASGGK-----------------DGVILLWDLAEGKR 203 (303)
Q Consensus 146 ~~dg~i~iwd~~~~~~~~~~---~~-~~~~i~~~~~~~-~~~~l~~~~~-----------------d~~v~iwd~~~~~~ 203 (303)
...+.|..+|..+++..... .+ .......+++.| +|+..++... ++.|..+|..+++.
T Consensus 98 d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 177 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKET 177 (322)
T ss_dssp ETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEE
T ss_pred ECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEE
Confidence 55556888887655432211 11 113467899999 9987766432 36788898876653
Q ss_pred EEEecCCCeEEEEEEcCCCeEEEE--EcCCcEEEEeCCC
Q 048118 204 LYSLDAGAVIHALCFSPNRYWLCA--ATEQSIKIWDLES 240 (303)
Q Consensus 204 ~~~~~~~~~v~~~~~s~~~~~l~~--~~~~~i~iwd~~~ 240 (303)
..........+.++++|++..+.+ ...+.|+.|++..
T Consensus 178 ~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 178 TLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp EEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred EEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 222111123456899999864433 3467899999875
No 243
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.28 E-value=4.6e-05 Score=69.95 Aligned_cols=163 Identities=10% Similarity=0.110 Sum_probs=102.2
Q ss_pred EEEEeeCCCEEEEEeCCCc-------------------EEEEecCC-ceeeeeecCCCCc-------cceEEEEEcCCCC
Q 048118 86 SVAFSIDNRQIVSASRDRT-------------------IKLWNTLG-ECKYTIQEGDAHT-------EWVSCVRFSPNTL 138 (303)
Q Consensus 86 ~i~~~~~~~~l~t~~~d~~-------------------i~vw~~~~-~~~~~~~~~~~~~-------~~i~~~~~~~~~~ 138 (303)
.+++++++.+++.+..++. |..+|..+ +..+..+.. .+. ..........++.
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~-~~d~wd~~~~~~~~l~d~~~~G~ 317 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTT-PGDAWDYTATQHMILAELPIDGK 317 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESS-TTCCSCCCCCSCEEEEEEEETTE
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecC-CcccccccCCCCcEEEeeccCCc
Confidence 4678888888888877753 88888753 334333321 111 1111111111221
Q ss_pred -CCEEEEEeCCCcEEEEECCCceeEEEEcCCC-C--------------------------------------CeeEEEEC
Q 048118 139 -QPTIVSASWDRTVKVWNLSNCKLRATLAGHT-G--------------------------------------YVNTVAVS 178 (303)
Q Consensus 139 -~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~-~--------------------------------------~i~~~~~~ 178 (303)
...++.++.+|.++++|..+++.+....-.. . .-..++++
T Consensus 318 ~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~d 397 (689)
T 1yiq_A 318 PRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYN 397 (689)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEE
T ss_pred EEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceEC
Confidence 1257788999999999999988763321100 0 01126788
Q ss_pred CCCCEEEEEeC---------------------------------------------CCeEEEEeCCCCceEEEecCCCeE
Q 048118 179 PDGSLCASGGK---------------------------------------------DGVILLWDLAEGKRLYSLDAGAVI 213 (303)
Q Consensus 179 ~~~~~l~~~~~---------------------------------------------d~~v~iwd~~~~~~~~~~~~~~~v 213 (303)
|+..++.+... +|.|+.||+.+++.+.+.......
T Consensus 398 p~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~ 477 (689)
T 1yiq_A 398 PDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIF 477 (689)
T ss_dssp TTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSC
T ss_pred CCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCc
Confidence 88777766532 378999999999988877544332
Q ss_pred EEEEEc-CCCeEEEEEcCCcEEEEeCCCCceeeeeee
Q 048118 214 HALCFS-PNRYWLCAATEQSIKIWDLESKSIVEDLKV 249 (303)
Q Consensus 214 ~~~~~s-~~~~~l~~~~~~~i~iwd~~~~~~~~~~~~ 249 (303)
..-.+. .++.++.++.|+.++.||.++++++.+.+.
T Consensus 478 ~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~ 514 (689)
T 1yiq_A 478 NGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPA 514 (689)
T ss_dssp CCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred cCccceECCCEEEEECCCCcEEEEECCCCccceeeeC
Confidence 222233 345666667799999999999999877654
No 244
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.27 E-value=0.0012 Score=54.52 Aligned_cols=251 Identities=10% Similarity=0.046 Sum_probs=132.8
Q ss_pred eeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCC----ceecccCCEEEEEEee-C
Q 048118 18 VTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDG----QFVGHTKDVLSVAFSI-D 92 (303)
Q Consensus 18 v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~~h~~~i~~i~~~~-~ 92 (303)
...+++++++ +++.++..++.|..|+....... .+......-. ....++ ........+..+++.+ +
T Consensus 21 p~~i~~d~~g-~~l~v~~~~~~i~~~~~~~~~~~------~~~~~~~~~~--~~~~~g~~~~~~~~~~~~p~gi~~~~~~ 91 (322)
T 2fp8_A 21 PNSFTFDSTN-KGFYTSVQDGRVIKYEGPNSGFV------DFAYASPYWN--KAFCENSTDAEKRPLCGRTYDISYNLQN 91 (322)
T ss_dssp CCCEECCTTC-SSEEEECTTSEEEEECCTTTCEE------EEEESCTTCC--HHHHTTCCCGGGHHHHCCEEEEEEETTT
T ss_pred ceEEEEcCCC-CEEEEEcCCCeEEEECCCCCceE------EEeccccccc--ccccccccchhccccCCCCceEEEcCCC
Confidence 4667788763 55677777888888876432110 0000000000 000000 0011123578899997 5
Q ss_pred CCEEEEEeCCCcEEEEecCCceeeeeec-CC-CCccceEEEEEcC-CCCCCEEEEEeC-----------------CCcEE
Q 048118 93 NRQIVSASRDRTIKLWNTLGECKYTIQE-GD-AHTEWVSCVRFSP-NTLQPTIVSASW-----------------DRTVK 152 (303)
Q Consensus 93 ~~~l~t~~~d~~i~vw~~~~~~~~~~~~-~~-~~~~~i~~~~~~~-~~~~~~~~~~~~-----------------dg~i~ 152 (303)
+. |+.+...+.|..++..+.....+.. .. ........+++.+ ++ ...++-.. ++.|.
T Consensus 92 g~-l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G--~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~ 168 (322)
T 2fp8_A 92 NQ-LYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTG--IVYFTDVSTLYDDRGVQQIMDTSDKTGRLI 168 (322)
T ss_dssp TE-EEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTC--CEEEEESCSSCCTTCHHHHHHHTCCCEEEE
T ss_pred Cc-EEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCC--EEEEECCcccccccccceehcccCCCceEE
Confidence 55 4445555557788765332211211 01 1112356788888 65 23333211 36788
Q ss_pred EEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEE-eCCCeEEEEeCCCC---c-eEEEecCCCeEEEEEEcCCCeEEEE
Q 048118 153 VWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASG-GKDGVILLWDLAEG---K-RLYSLDAGAVIHALCFSPNRYWLCA 227 (303)
Q Consensus 153 iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~v~iwd~~~~---~-~~~~~~~~~~v~~~~~s~~~~~l~~ 227 (303)
.+|..+++....... ......++++|+++.|..+ +..++|.++++... + .... .... ...+++.++|.+.++
T Consensus 169 ~~d~~~~~~~~~~~~-~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~-~~~g-P~gi~~d~~G~l~va 245 (322)
T 2fp8_A 169 KYDPSTKETTLLLKE-LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLV-KIPN-PGNIKRNADGHFWVS 245 (322)
T ss_dssp EEETTTTEEEEEEEE-ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEE-ECSS-EEEEEECTTSCEEEE
T ss_pred EEeCCCCEEEEeccC-CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEE-eCCC-CCCeEECCCCCEEEE
Confidence 888876654332221 2345679999999866544 56789999998742 1 1111 1222 677899998865544
Q ss_pred E-c----------CCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEE
Q 048118 228 A-T----------EQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIR 296 (303)
Q Consensus 228 ~-~----------~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~ 296 (303)
. . .+.|..+|.. ++.+..+...-.. . ...++.+.+ .++.++++....+.|.
T Consensus 246 ~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~-----~-----------~~~~~~~~~-~~g~L~v~~~~~~~i~ 307 (322)
T 2fp8_A 246 SSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPF-----A-----------GEHFEQIQE-HDGLLYIGTLFHGSVG 307 (322)
T ss_dssp EEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTT-----T-----------TSCCCEEEE-ETTEEEEECSSCSEEE
T ss_pred ecCcccccccCCCccEEEEECCC-CCEEEEEECCCCC-----c-----------cccceEEEE-eCCEEEEeecCCCceE
Confidence 3 3 3568888864 5555444321000 0 011233444 3566666666788898
Q ss_pred EEecc
Q 048118 297 VWGIG 301 (303)
Q Consensus 297 ~w~~~ 301 (303)
.+++.
T Consensus 308 ~~~~~ 312 (322)
T 2fp8_A 308 ILVYD 312 (322)
T ss_dssp EEEC-
T ss_pred EEecc
Confidence 88874
No 245
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.26 E-value=0.00097 Score=53.34 Aligned_cols=155 Identities=11% Similarity=0.008 Sum_probs=94.2
Q ss_pred CEEEEEEeeCCCEE-EEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCcee
Q 048118 83 DVLSVAFSIDNRQI-VSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKL 161 (303)
Q Consensus 83 ~i~~i~~~~~~~~l-~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~ 161 (303)
.+..+++++++..| ++-...+.|..++..+.....+.. ........++++|.+. ...++-...+.|.++++.....
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~--~~~~~p~~ia~d~~~~-~lyv~d~~~~~I~~~~~~g~~~ 113 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIR--QDLGSPEGIALDHLGR-TIFWTDSQLDRIEVAKMDGTQR 113 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEC--TTCCCEEEEEEETTTT-EEEEEETTTTEEEEEETTSCSC
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEE--CCCCCccEEEEEecCC-eEEEEECCCCEEEEEEcCCCCE
Confidence 46789999866554 444556789999876543222221 1123467899988642 3444445567899999865433
Q ss_pred EEEEcCCCCCeeEEEECCCCCEEEEEeC---CCeEEEEeCCCCceEEEe--cCCCeEEEEEEcCCCe-EEEE-EcCCcEE
Q 048118 162 RATLAGHTGYVNTVAVSPDGSLCASGGK---DGVILLWDLAEGKRLYSL--DAGAVIHALCFSPNRY-WLCA-ATEQSIK 234 (303)
Q Consensus 162 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~---d~~v~iwd~~~~~~~~~~--~~~~~v~~~~~s~~~~-~l~~-~~~~~i~ 234 (303)
.............++++|++..|..+.. .+.|..+++..... ..+ ........+++++++. +.++ ...+.|.
T Consensus 114 ~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~-~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~ 192 (267)
T 1npe_A 114 RVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR-RILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAE 192 (267)
T ss_dssp EEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC-EEEECTTCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc-EEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEE
Confidence 2222222245688999996665544443 46888888764322 222 2224577899999753 3333 3467899
Q ss_pred EEeCCCC
Q 048118 235 IWDLESK 241 (303)
Q Consensus 235 iwd~~~~ 241 (303)
++|....
T Consensus 193 ~~~~~g~ 199 (267)
T 1npe_A 193 CLNPAQP 199 (267)
T ss_dssp EEETTEE
T ss_pred EEecCCC
Confidence 9998754
No 246
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.23 E-value=0.0011 Score=52.87 Aligned_cols=203 Identities=7% Similarity=-0.028 Sum_probs=121.3
Q ss_pred eeecccccccccc--eeeeecCCCCCcEEEEecC--CCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecc
Q 048118 5 LVLKGTMRAHTDM--VTAIATPIDNSDMIVTASR--DKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGH 80 (303)
Q Consensus 5 ~~~~~~~~~h~~~--v~~v~~~~~~~~~~~t~s~--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h 80 (303)
.+++.++ .|... ...+.+++++ .++++.+. ++.|.+.|...++... .. .+ +..
T Consensus 9 ~~vv~~~-p~~~~~f~~Gl~~~~dg-~Lyvstg~~~~s~v~~iD~~tg~v~~-----~i----------~l-~~~----- 65 (266)
T 2iwa_A 9 VEVLNEF-PHDPYAFTQGLVYAEND-TLFESTGLYGRSSVRQVALQTGKVEN-----IH----------KM-DDS----- 65 (266)
T ss_dssp EEEEEEE-ECCTTCCEEEEEECSTT-EEEEEECSTTTCEEEEEETTTCCEEE-----EE----------EC-CTT-----
T ss_pred ceEEEEE-ECCCCCCcccEEEeCCC-eEEEECCCCCCCEEEEEECCCCCEEE-----EE----------ec-CCC-----
Confidence 3556555 35433 4689998763 55665553 6799999987654211 11 00 000
Q ss_pred cCCEEEEEEeeCCCEEEEEeCCCcEEEEecCCcee-eeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCc
Q 048118 81 TKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECK-YTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNC 159 (303)
Q Consensus 81 ~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~ 159 (303)
.-...+++. .+.+.++.-.++.+.++|...... ..+....+ .. ..+ .+++. ..+ .+..++.|.++|..+.
T Consensus 66 -~fgeGi~~~-g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~--~g-~gl--t~Dg~-~l~-vs~gs~~l~viD~~t~ 136 (266)
T 2iwa_A 66 -YFGEGLTLL-NEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMK--DG-WGL--ATDGK-ILY-GSDGTSILYEIDPHTF 136 (266)
T ss_dssp -CCEEEEEEE-TTEEEEEETTCSEEEEEETTTTEEEEEEECCSS--SC-CEE--EECSS-SEE-EECSSSEEEEECTTTC
T ss_pred -cceEEEEEe-CCEEEEEEecCCEEEEEECCCCcEEEEEECCCC--Ce-EEE--EECCC-EEE-EECCCCeEEEEECCCC
Confidence 011234444 234445555678999999764332 22222101 11 223 34442 234 4456889999999998
Q ss_pred eeEEEEcCCC-----CCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEecCC--------------CeEEEEEEcC
Q 048118 160 KLRATLAGHT-----GYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAG--------------AVIHALCFSP 220 (303)
Q Consensus 160 ~~~~~~~~~~-----~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~--------------~~v~~~~~s~ 220 (303)
+....+.-.. ...+.+.+. +++.++....++.|.+.|..+++.+..+... ...+.++|+|
T Consensus 137 ~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~ 215 (266)
T 2iwa_A 137 KLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQ 215 (266)
T ss_dssp CEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEET
T ss_pred cEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcC
Confidence 8776665321 135677777 6766666656889999999999988877542 3568999999
Q ss_pred CCe-EEEEE-cCCcEEEEeCCC
Q 048118 221 NRY-WLCAA-TEQSIKIWDLES 240 (303)
Q Consensus 221 ~~~-~l~~~-~~~~i~iwd~~~ 240 (303)
++. +++++ ..++++..++..
T Consensus 216 ~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 216 ENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp TTTEEEEEETTCSEEEEEEEEE
T ss_pred CCCEEEEECCCCCeEEEEEEec
Confidence 864 33333 467788777643
No 247
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.11 E-value=1.8e-05 Score=66.71 Aligned_cols=89 Identities=9% Similarity=-0.066 Sum_probs=71.0
Q ss_pred cEEEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEe----------CCCeEEEEeCCCCceEEEecCC--------C
Q 048118 150 TVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGG----------KDGVILLWDLAEGKRLYSLDAG--------A 211 (303)
Q Consensus 150 ~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----------~d~~v~iwd~~~~~~~~~~~~~--------~ 211 (303)
.|.++|..+++.+.++.....+ .+.++|+++++.++. .++.|.+||+.+++.+.++..+ .
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 7889999999998888765555 799999999887775 3789999999999998887532 2
Q ss_pred eEEEEEEcCCCeEEEEEc---CCcEEE--EeCCC
Q 048118 212 VIHALCFSPNRYWLCAAT---EQSIKI--WDLES 240 (303)
Q Consensus 212 ~v~~~~~s~~~~~l~~~~---~~~i~i--wd~~~ 240 (303)
....++++||+.++.++. .+.+.+ +|..+
T Consensus 125 ~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 125 RVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp CTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred CcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 355789999997776653 456888 99866
No 248
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.11 E-value=0.0011 Score=60.65 Aligned_cols=57 Identities=16% Similarity=0.197 Sum_probs=40.2
Q ss_pred cEEEEECCCceeEEEEcC--CC-------CCeeEEEECCCCC---EEEEEeCCCeEEEEeCCCCceEEE
Q 048118 150 TVKVWNLSNCKLRATLAG--HT-------GYVNTVAVSPDGS---LCASGGKDGVILLWDLAEGKRLYS 206 (303)
Q Consensus 150 ~i~iwd~~~~~~~~~~~~--~~-------~~i~~~~~~~~~~---~l~~~~~d~~v~iwd~~~~~~~~~ 206 (303)
.|..+|.++++.+..++. |. .+.....+..+|+ .++.++.+|.+.++|..+|+.+..
T Consensus 271 ~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~ 339 (668)
T 1kv9_A 271 SILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISA 339 (668)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEE
T ss_pred eEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecc
Confidence 499999999998777653 22 2222222223564 688899999999999999998743
No 249
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.10 E-value=0.00027 Score=56.12 Aligned_cols=151 Identities=11% Similarity=0.126 Sum_probs=96.3
Q ss_pred cceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEEEcCCCCCeeE--EEECCCCCEEEEEeCCCeEEEEeCCCCce
Q 048118 126 EWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNT--VAVSPDGSLCASGGKDGVILLWDLAEGKR 203 (303)
Q Consensus 126 ~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~--~~~~~~~~~l~~~~~d~~v~iwd~~~~~~ 203 (303)
.....+.|+.+ ....+.+.+|.|+++|+++++....+ - ...... +.+.. ++.....-.++.+.++|..+.+.
T Consensus 55 ~ftqGL~~~~~---~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-~~~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~ 128 (268)
T 3nok_A 55 AFTQGLVFHQG---HFFESTGHQGTLRQLSLESAQPVWME-R-LGNIFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQR 128 (268)
T ss_dssp CCEEEEEEETT---EEEEEETTTTEEEECCSSCSSCSEEE-E-CTTCCEEEEEECS-SCEEEEESSSCEEEEEETTTTEE
T ss_pred cccceEEEECC---EEEEEcCCCCEEEEEECCCCcEEeEE-C-CCCcceeEEEEeC-CEEEEEEccCCEEEEEECCcCcE
Confidence 34577888742 46677788889999999999877766 2 223333 55543 34445556799999999999999
Q ss_pred EEEecCCCeEEEEEEcCCCe-EEEEEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCC
Q 048118 204 LYSLDAGAVIHALCFSPNRY-WLCAATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVD 282 (303)
Q Consensus 204 ~~~~~~~~~v~~~~~s~~~~-~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~ 282 (303)
+.++.....-..+++ ++. ++++..++.|+++|.++.+.+..+.+...... -...+.+.|. +
T Consensus 129 ~~ti~~~~eGwGLt~--Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~---------------v~~lNeLe~~-d 190 (268)
T 3nok_A 129 ERTTRYSGEGWGLCY--WNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQP---------------VELINELECA-N 190 (268)
T ss_dssp EEEEECSSCCCCEEE--ETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEE---------------CCCEEEEEEE-T
T ss_pred EEEEeCCCceeEEec--CCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcc---------------cccccccEEe-C
Confidence 988875443334443 443 34444578999999999988887765321100 0122445555 5
Q ss_pred CCEEEEeecCCeEEEEec
Q 048118 283 GSTLFSGYTDGVIRVWGI 300 (303)
Q Consensus 283 ~~~l~~gs~Dg~v~~w~~ 300 (303)
|...+....++.|.+-|.
T Consensus 191 G~lyanvw~s~~I~vIDp 208 (268)
T 3nok_A 191 GVIYANIWHSSDVLEIDP 208 (268)
T ss_dssp TEEEEEETTCSEEEEECT
T ss_pred CEEEEEECCCCeEEEEeC
Confidence 554444445666666654
No 250
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.99 E-value=0.0011 Score=59.47 Aligned_cols=58 Identities=12% Similarity=0.129 Sum_probs=40.4
Q ss_pred cEEEEECCCceeEEEEcCC--C--------CCeeEEEECCCCC---EEEEEeCCCeEEEEeCCCCceEEEec
Q 048118 150 TVKVWNLSNCKLRATLAGH--T--------GYVNTVAVSPDGS---LCASGGKDGVILLWDLAEGKRLYSLD 208 (303)
Q Consensus 150 ~i~iwd~~~~~~~~~~~~~--~--------~~i~~~~~~~~~~---~l~~~~~d~~v~iwd~~~~~~~~~~~ 208 (303)
.|..+|.++++.+..++.. . .++. +...++|+ .++.++.+|.+.++|..+++.+....
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~ 343 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEK 343 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeec
Confidence 5899999999887766532 1 1221 22224664 56778889999999999999877653
No 251
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.96 E-value=0.001 Score=61.71 Aligned_cols=152 Identities=12% Similarity=0.082 Sum_probs=87.5
Q ss_pred CEEEEEEe-eCCCEEEEEeC-CC----cEEEEecCCc-eeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCC-----Cc
Q 048118 83 DVLSVAFS-IDNRQIVSASR-DR----TIKLWNTLGE-CKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWD-----RT 150 (303)
Q Consensus 83 ~i~~i~~~-~~~~~l~t~~~-d~----~i~vw~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d-----g~ 150 (303)
.+...+|+ |+|++++-+.. +| .|.++|+.+. .... +.-......+.|+|++. .|+....+ ..
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~----~~~~~~~~~~~WspDg~--~l~y~~~d~~~~~~~ 248 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIA----DKVSGTNGEIVWGPDHT--SLFYVTKDETLRENK 248 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCC----CCEEEECSCCEECSSTT--EEEEEEECTTCCEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCC----ccccCceeeEEEecCCC--EEEEEEECCCCCCCE
Confidence 46678999 99998774432 22 4888898654 3111 00011123578999873 34444443 25
Q ss_pred EEEEECCCcee--EEEEc-CCCCCeeEEEECCCCCEEEEEeC---CCeEEEEeCCCCc-eE--EEec--CCCeEEEEEEc
Q 048118 151 VKVWNLSNCKL--RATLA-GHTGYVNTVAVSPDGSLCASGGK---DGVILLWDLAEGK-RL--YSLD--AGAVIHALCFS 219 (303)
Q Consensus 151 i~iwd~~~~~~--~~~~~-~~~~~i~~~~~~~~~~~l~~~~~---d~~v~iwd~~~~~-~~--~~~~--~~~~v~~~~~s 219 (303)
|+.+++.+.+. ...+. ........+.|+|+|++|+..+. ...|.++|+.++. .. ..+. ......+..|+
T Consensus 249 v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~ 328 (751)
T 2xe4_A 249 VWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMH 328 (751)
T ss_dssp EEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEE
T ss_pred EEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeee
Confidence 77788876532 12222 22234567899999998876552 3478888987652 12 3332 22344556655
Q ss_pred CCCeEEEEEcC-----CcEEEEeCCC
Q 048118 220 PNRYWLCAATE-----QSIKIWDLES 240 (303)
Q Consensus 220 ~~~~~l~~~~~-----~~i~iwd~~~ 240 (303)
.++.++..+.. ..|+.+|+.+
T Consensus 329 ~g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 329 GTSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp TTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred eCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 55555555432 2577777654
No 252
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.90 E-value=0.0015 Score=51.78 Aligned_cols=118 Identities=14% Similarity=0.136 Sum_probs=79.5
Q ss_pred cceEEEEEcCCCCCCEEEEEeCCC--cEEEEECCCceeEEEEcCCCCCeeEEEECCCCCEE-EEEeCCCeEEEEeCCCCc
Q 048118 126 EWVSCVRFSPNTLQPTIVSASWDR--TVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLC-ASGGKDGVILLWDLAEGK 202 (303)
Q Consensus 126 ~~i~~~~~~~~~~~~~~~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~d~~v~iwd~~~~~ 202 (303)
.....+.|+ ++ ....+.+.+| .|+.+|+++++....+.-.. ......+.+++..| ...-.++.+.++|..+.+
T Consensus 43 ~ftqGL~~~-~~--~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~ 118 (262)
T 3nol_A 43 AFTEGFFYR-NG--YFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLR 118 (262)
T ss_dssp CEEEEEEEE-TT--EEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEEEEEETTTCC
T ss_pred cccceEEEE-CC--EEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEeeCCEEEEEECccCc
Confidence 345778888 33 3555666655 89999999999887775432 33333333344444 444568999999999999
Q ss_pred eEEEecCCCeEEEEEEcCCCeEE-EEEcCCcEEEEeCCCCceeeeeee
Q 048118 203 RLYSLDAGAVIHALCFSPNRYWL-CAATEQSIKIWDLESKSIVEDLKV 249 (303)
Q Consensus 203 ~~~~~~~~~~v~~~~~s~~~~~l-~~~~~~~i~iwd~~~~~~~~~~~~ 249 (303)
.+.++.....-..++ +++..| .+...+.|+++|.++.+.+..+.+
T Consensus 119 ~~~ti~~~~eG~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V 164 (262)
T 3nol_A 119 QVRSFNYDGEGWGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITV 164 (262)
T ss_dssp EEEEEECSSCCCCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEEC
T ss_pred EEEEEECCCCceEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEe
Confidence 998887544323444 344433 333467899999999988887765
No 253
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.89 E-value=0.0055 Score=48.60 Aligned_cols=202 Identities=10% Similarity=0.097 Sum_probs=117.7
Q ss_pred ccccccceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEe
Q 048118 11 MRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFS 90 (303)
Q Consensus 11 ~~~h~~~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~ 90 (303)
+.+-.+.+..++++|++..+++....++.|...|.. .. ..+. +.+. + ....-.|++.
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~-----v~~~----------i~l~------g-~~D~EGIa~~ 78 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GD-----LIRT----------IPLD------F-VKDLETIEYI 78 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CC-----EEEE----------EECS------S-CSSEEEEEEC
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CC-----EEEE----------EecC------C-CCChHHeEEe
Confidence 444446789999998765566656666666666654 11 1111 1110 0 1345678888
Q ss_pred eCCCEEEEEeCCCcEEEEecCCcee----eeee--c-CCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCC---ce
Q 048118 91 IDNRQIVSASRDRTIKLWNTLGECK----YTIQ--E-GDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSN---CK 160 (303)
Q Consensus 91 ~~~~~l~t~~~d~~i~vw~~~~~~~----~~~~--~-~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~---~~ 160 (303)
+++.++++.-.++.+.++++..... .... . ....+.....++++|... .+.++.......+|.... ..
T Consensus 79 ~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~--~L~va~E~~p~~i~~~~g~~~~~ 156 (255)
T 3qqz_A 79 GDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDH--TFWFFKEKNPIEVYKVNGLLSSN 156 (255)
T ss_dssp STTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTT--EEEEEEESSSEEEEEEESTTCSS
T ss_pred CCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCC--EEEEEECcCCceEEEEcccccCC
Confidence 8887767665667788877543221 1111 0 112345578999999752 344444443444443321 11
Q ss_pred eEEEEc-------CCCCCeeEEEECCCCC-EEEEEeCCCeEEEEeCCCCceEEEecCC----------CeEEEEEEcCCC
Q 048118 161 LRATLA-------GHTGYVNTVAVSPDGS-LCASGGKDGVILLWDLAEGKRLYSLDAG----------AVIHALCFSPNR 222 (303)
Q Consensus 161 ~~~~~~-------~~~~~i~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~~----------~~v~~~~~s~~~ 222 (303)
....+. .+...+.+++++|... +++....++.+.++|.. ++.+..+... .....++|.++|
T Consensus 157 ~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G 235 (255)
T 3qqz_A 157 ELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASG 235 (255)
T ss_dssp CCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTC
T ss_pred ceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCC
Confidence 111111 1234578999999554 55666678899999976 4454444221 256789999999
Q ss_pred eEEEEEcCCcEEEEeC
Q 048118 223 YWLCAATEQSIKIWDL 238 (303)
Q Consensus 223 ~~l~~~~~~~i~iwd~ 238 (303)
.+..++..+.++.|.-
T Consensus 236 ~lyIvsE~n~~y~f~~ 251 (255)
T 3qqz_A 236 NIYIVSEPNRFYRFTP 251 (255)
T ss_dssp CEEEEETTTEEEEEEC
T ss_pred CEEEEcCCceEEEEEe
Confidence 8888888777777753
No 254
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.88 E-value=0.0039 Score=48.89 Aligned_cols=121 Identities=12% Similarity=0.019 Sum_probs=81.2
Q ss_pred ccceEEEEEcCCCCCCEEEEEeCC--CcEEEEECCCceeEEEEcCCCCCeeEEEECCCCC-EEEEEeCCCeEEEEeCCCC
Q 048118 125 TEWVSCVRFSPNTLQPTIVSASWD--RTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGS-LCASGGKDGVILLWDLAEG 201 (303)
Q Consensus 125 ~~~i~~~~~~~~~~~~~~~~~~~d--g~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~ 201 (303)
......+.|+++ ....+.+.+ +.|+.+|+.+++....+.-.. ......+.+.+. .....-.++.+.++|..+.
T Consensus 20 ~~ftqGL~~~~~---~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~-~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl 95 (243)
T 3mbr_X 20 TAFTEGLFYLRG---HLYESTGETGRSSVRKVDLETGRILQRAEVPP-PYFGAGIVAWRDRLIQLTWRNHEGFVYDLATL 95 (243)
T ss_dssp TCCEEEEEEETT---EEEEEECCTTSCEEEEEETTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEEEEEETTTT
T ss_pred ccccccEEEECC---EEEEECCCCCCceEEEEECCCCCEEEEEeCCC-CcceeEEEEeCCEEEEEEeeCCEEEEEECCcC
Confidence 345678889863 345555554 489999999999887765432 223222223344 4455557899999999999
Q ss_pred ceEEEecCCCeEEEEEEcCCCeEEEEEcCCcEEEEeCCCCceeeeeeec
Q 048118 202 KRLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVD 250 (303)
Q Consensus 202 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~ 250 (303)
+.+.++.....-..++.. .+.++++..++.|+++|.++.+.+..+.+.
T Consensus 96 ~~~~ti~~~~~Gwglt~d-g~~L~vSdgs~~l~~iDp~t~~~~~~I~V~ 143 (243)
T 3mbr_X 96 TPRARFRYPGEGWALTSD-DSHLYMSDGTAVIRKLDPDTLQQVGSIKVT 143 (243)
T ss_dssp EEEEEEECSSCCCEEEEC-SSCEEEECSSSEEEEECTTTCCEEEEEECE
T ss_pred cEEEEEeCCCCceEEeeC-CCEEEEECCCCeEEEEeCCCCeEEEEEEEc
Confidence 999888765433445533 234444445778999999999888777653
No 255
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.88 E-value=0.0071 Score=49.39 Aligned_cols=225 Identities=10% Similarity=0.045 Sum_probs=115.9
Q ss_pred ceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEeeCCCEE
Q 048118 17 MVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSIDNRQI 96 (303)
Q Consensus 17 ~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~~~~~l 96 (303)
....+++++++ +++++-..++.|..|+.... . ... + ...+.+..+++.+++.++
T Consensus 33 ~pegia~~~~g-~lyv~d~~~~~I~~~d~~g~--~----~~~------------~-------~~~~~p~gia~~~dG~l~ 86 (306)
T 2p4o_A 33 FLENLASAPDG-TIFVTNHEVGEIVSITPDGN--Q----QIH------------A-------TVEGKVSGLAFTSNGDLV 86 (306)
T ss_dssp CEEEEEECTTS-CEEEEETTTTEEEEECTTCC--E----EEE------------E-------ECSSEEEEEEECTTSCEE
T ss_pred CcceEEECCCC-CEEEEeCCCCeEEEECCCCc--e----EEE------------E-------eCCCCceeEEEcCCCcEE
Confidence 45677888754 56777667778877765321 0 000 0 011346789999999866
Q ss_pred EEEeCCC--cEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEE-Ec-------
Q 048118 97 VSASRDR--TIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRAT-LA------- 166 (303)
Q Consensus 97 ~t~~~d~--~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~-~~------- 166 (303)
++....+ .|..++........+... ........++..+.+ ..+++-..++.|..+|..+++.... ..
T Consensus 87 vad~~~~~~~v~~~d~~~g~~~~~~~~-~~~~~~~g~~~~~~~--~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~ 163 (306)
T 2p4o_A 87 ATGWNADSIPVVSLVKSDGTVETLLTL-PDAIFLNGITPLSDT--QYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSN 163 (306)
T ss_dssp EEEECTTSCEEEEEECTTSCEEEEEEC-TTCSCEEEEEESSSS--EEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSS
T ss_pred EEeccCCcceEEEEcCCCCeEEEEEeC-CCccccCcccccCCC--cEEEEECCCCeEEEEeCCCCcEeEEEECCcccccc
Confidence 6554332 355555433222222111 111112334433332 2344444578899999765431111 10
Q ss_pred --CCCCCeeEEEECCCCCEEEE-EeCCCeEEEEeCCC-Cce--EEEecCCCeEEEEEEcCCCeEEEEE-cCCcEEEEeCC
Q 048118 167 --GHTGYVNTVAVSPDGSLCAS-GGKDGVILLWDLAE-GKR--LYSLDAGAVIHALCFSPNRYWLCAA-TEQSIKIWDLE 239 (303)
Q Consensus 167 --~~~~~i~~~~~~~~~~~l~~-~~~d~~v~iwd~~~-~~~--~~~~~~~~~v~~~~~s~~~~~l~~~-~~~~i~iwd~~ 239 (303)
........+ +|+++.|.. -+..++|..+++.. ++. ...+........++++++|.+.++. ..+.|.++|..
T Consensus 164 ~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~ 241 (306)
T 2p4o_A 164 SESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD 241 (306)
T ss_dssp TTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT
T ss_pred ccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEECCC
Confidence 111233445 788876644 45678999999864 321 1111111233457788888654443 46789999875
Q ss_pred CCceeeeeeeccccccccccCccceeeccccceeEEEEEEc---CCCCEEEEeec
Q 048118 240 SKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWS---VDGSTLFSGYT 291 (303)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s---p~~~~l~~gs~ 291 (303)
+++.....+. ......++++|. |+++.|.+++.
T Consensus 242 -G~~~~~~~~~------------------~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 242 -RSTTIIAQAE------------------QGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp -CCEEEEECGG------------------GTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred -CCEEEEeecc------------------cccCCceEEEEecccCCCCEEEEECC
Confidence 4432110110 001234678898 88777666554
No 256
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.81 E-value=0.0098 Score=48.96 Aligned_cols=205 Identities=10% Similarity=0.020 Sum_probs=114.6
Q ss_pred eeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEeeCCC-EE
Q 048118 18 VTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSIDNR-QI 96 (303)
Q Consensus 18 v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~~~~-~l 96 (303)
..++.|++.+..++.+-...+.|..++.......... .......+..+++.+.+. ++
T Consensus 37 ~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~----------------------~~~~l~~p~glavd~~~g~ly 94 (318)
T 3sov_A 37 AAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNV----------------------VVSGLLSPDGLACDWLGEKLY 94 (318)
T ss_dssp EEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEE----------------------EEECCSCCCEEEEETTTTEEE
T ss_pred cEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEE----------------------EcCCCCCccEEEEEcCCCeEE
Confidence 4466677654555555555666666665432100000 000112345788886544 44
Q ss_pred EEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEe--CCCcEEEEECCCceeEEEEcCCCCCeeE
Q 048118 97 VSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSAS--WDRTVKVWNLSNCKLRATLAGHTGYVNT 174 (303)
Q Consensus 97 ~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~i~~ 174 (303)
.+-...+.|.+++..+.....+.. ........++++|.. ..+.... ..+.|...++............-..-..
T Consensus 95 ~~d~~~~~I~~~~~dG~~~~~l~~--~~~~~P~giavdp~~--g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Png 170 (318)
T 3sov_A 95 WTDSETNRIEVSNLDGSLRKVLFW--QELDQPRAIALDPSS--GFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNG 170 (318)
T ss_dssp EEETTTTEEEEEETTSCSCEEEEC--SSCSSEEEEEEEGGG--TEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEE
T ss_pred EEECCCCEEEEEECCCCcEEEEEe--CCCCCccEEEEeCCC--CEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccE
Confidence 555566788888876543322221 122345788888854 2344444 3577888887543322222222345688
Q ss_pred EEECCCCCEEEEE-eCCCeEEEEeCCCCceEEEec-CCCeEEEEEEcCCCeEEEEEcCCcEEEEeCCCCceeeeee
Q 048118 175 VAVSPDGSLCASG-GKDGVILLWDLAEGKRLYSLD-AGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLK 248 (303)
Q Consensus 175 ~~~~~~~~~l~~~-~~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~~ 248 (303)
++++|++..|..+ +..+.|..+|+.......... .......+++..++.+.+-...+.|..+|..+++....+.
T Consensus 171 lavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 171 LTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIH 246 (318)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred EEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeCCEEEEEecCCCeEEEEECCCCCceEEEe
Confidence 9999976655444 567899999986433221122 2334556777655444454456889999987776555443
No 257
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.74 E-value=0.0058 Score=54.97 Aligned_cols=58 Identities=12% Similarity=0.128 Sum_probs=41.1
Q ss_pred CcEEEEECCCceeEEEEcCCC----------CCeeEEEEC-CCC---CEEEEEeCCCeEEEEeCCCCceEEEe
Q 048118 149 RTVKVWNLSNCKLRATLAGHT----------GYVNTVAVS-PDG---SLCASGGKDGVILLWDLAEGKRLYSL 207 (303)
Q Consensus 149 g~i~iwd~~~~~~~~~~~~~~----------~~i~~~~~~-~~~---~~l~~~~~d~~v~iwd~~~~~~~~~~ 207 (303)
+.|..+|.++++.+..++... .++. +... .+| ..++.++.+|.+.++|.++++.+...
T Consensus 278 ~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~ 349 (599)
T 1w6s_A 278 MTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSAN 349 (599)
T ss_dssp SEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred ceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecc
Confidence 479999999998877665421 1121 2222 467 46777889999999999999987664
No 258
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.74 E-value=0.013 Score=48.49 Aligned_cols=188 Identities=11% Similarity=0.226 Sum_probs=107.7
Q ss_pred CCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCC----CCCC-E-EEEEeC--CCcEEEEECC--Ccee
Q 048118 92 DNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPN----TLQP-T-IVSASW--DRTVKVWNLS--NCKL 161 (303)
Q Consensus 92 ~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~-~-~~~~~~--dg~i~iwd~~--~~~~ 161 (303)
..++++.....+-+.+||+.+.....+.. ..++.+..-|+ +... . +++.-. +..|.+|++. +++
T Consensus 39 ~~s~ii~t~k~~gL~Vydl~G~~l~~~~~-----g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~- 112 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSLDGKMLHSYNT-----GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT- 112 (355)
T ss_dssp GGCEEEEEETTTEEEEEETTSCEEEEECC-----SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-
T ss_pred CccEEEEEcCCCCEEEEcCCCcEEEEccC-----CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-
Confidence 44567767777889999997665433321 22344443331 1111 2 233333 5789999763 333
Q ss_pred EEEEcC------CC-CCeeEEEE--CCC-CC-EEEEEeCCCeEEEEeCC-------CCceEEEecCCCeEEEEEEcCC-C
Q 048118 162 RATLAG------HT-GYVNTVAV--SPD-GS-LCASGGKDGVILLWDLA-------EGKRLYSLDAGAVIHALCFSPN-R 222 (303)
Q Consensus 162 ~~~~~~------~~-~~i~~~~~--~~~-~~-~l~~~~~d~~v~iwd~~-------~~~~~~~~~~~~~v~~~~~s~~-~ 222 (303)
...+.. .. ..+..+++ +|. ++ ++++...+|.+..|++. +.+.++++...+.+..+...+. +
T Consensus 113 l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g 192 (355)
T 3amr_A 113 LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYG 192 (355)
T ss_dssp EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTT
T ss_pred eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCC
Confidence 333321 11 45666777 774 44 57778889999999983 3356778877888888888876 4
Q ss_pred eEEEEEcCCcEEEEeCC-----CCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCC-EEEEee-cCCeE
Q 048118 223 YWLCAATEQSIKIWDLE-----SKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGS-TLFSGY-TDGVI 295 (303)
Q Consensus 223 ~~l~~~~~~~i~iwd~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~-~l~~gs-~Dg~v 295 (303)
.++++-.+..|+.|+.+ +++++..... . .+...... ..+...++++ +|+++| .+++.
T Consensus 193 ~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~--g-------------~l~aDvEG-Lai~~~~~g~gyLivSsQG~~s~ 256 (355)
T 3amr_A 193 RLYIAEEDEAIWKFSAEPDGGSNGTVIDRADG--R-------------HLTRDIEG-LTIYYAADGKGYLMASSQGNSSY 256 (355)
T ss_dssp EEEEEETTTEEEEEECSTTSCSCCEEEEEBSS--S-------------SBCSCEEE-EEEEECGGGCEEEEEEEGGGTEE
T ss_pred eEEEecccceEEEEeCCcCCCCCceEEEEecC--C-------------ccccCcce-EEEEecCCCCEEEEEEcCCCCEE
Confidence 55555566668888855 2233321110 0 01100111 1233356666 677666 57799
Q ss_pred EEEecc
Q 048118 296 RVWGIG 301 (303)
Q Consensus 296 ~~w~~~ 301 (303)
.+||..
T Consensus 257 ~Vydr~ 262 (355)
T 3amr_A 257 AIYDRQ 262 (355)
T ss_dssp EEEESS
T ss_pred EEEECC
Confidence 999874
No 259
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.72 E-value=0.011 Score=54.86 Aligned_cols=194 Identities=8% Similarity=0.031 Sum_probs=98.1
Q ss_pred ceeeeecC-CCCCcEEEEecCCC----cEEEEEcccC-ccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEe
Q 048118 17 MVTAIATP-IDNSDMIVTASRDK----SIIVWHLTKE-EKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFS 90 (303)
Q Consensus 17 ~v~~v~~~-~~~~~~~~t~s~d~----~i~iw~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~ 90 (303)
.+....|+ |++..+..+.+.+| +|+++++..+ +.... .+ . .....+.|+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-----------~~-----------~---~~~~~~~Ws 229 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-----------KV-----------S---GTNGEIVWG 229 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-----------CE-----------E---EECSCCEEC
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-----------cc-----------c---CceeeEEEe
Confidence 46677899 87653333433333 4888888654 31100 00 0 001257799
Q ss_pred eCCCEEEEEeCCC-----cEEEEecCCcee--eeeecCCCCccceEEEEEcCCCCCCEEEEEe--CCCcEEEEECCCc--
Q 048118 91 IDNRQIVSASRDR-----TIKLWNTLGECK--YTIQEGDAHTEWVSCVRFSPNTLQPTIVSAS--WDRTVKVWNLSNC-- 159 (303)
Q Consensus 91 ~~~~~l~t~~~d~-----~i~vw~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--~dg~i~iwd~~~~-- 159 (303)
|+++.|+....|. .|.++++.+... ..+.. .........+.|+|++.. .+++.. ....|.++|+.++
T Consensus 230 pDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~-~~~~~~~~~~~~SpDg~~-l~~~~~~~~~~~l~~~d~~~~~~ 307 (751)
T 2xe4_A 230 PDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYE-EHNPLFSAFMYKAADTNT-LCIGSQSPETAEVHLLDLRKGNA 307 (751)
T ss_dssp SSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEE-CCCTTCEEEEEECTTSSE-EEEEEECSSCEEEEEEESSSCTT
T ss_pred cCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEe-cCCCceEEEEEECCCCCE-EEEEecCCCCceEEEEECCCCCC
Confidence 9998777666552 466666644221 11111 122234567889998732 233332 2346888888764
Q ss_pred ee-EEEEc-CCCCCeeEEEECCCCCEE-EEEeCC----CeEEEEeCCCC-c--e-EEEecCCCeEEEEEEcCCCeEEEEE
Q 048118 160 KL-RATLA-GHTGYVNTVAVSPDGSLC-ASGGKD----GVILLWDLAEG-K--R-LYSLDAGAVIHALCFSPNRYWLCAA 228 (303)
Q Consensus 160 ~~-~~~~~-~~~~~i~~~~~~~~~~~l-~~~~~d----~~v~iwd~~~~-~--~-~~~~~~~~~v~~~~~s~~~~~l~~~ 228 (303)
+. ...+. ...+...++.|+. +..| +.+..+ ..|..+|+.++ + . +..-.....+..+.+..+..++...
T Consensus 308 ~~~~~~l~~~~~~~~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~ 386 (751)
T 2xe4_A 308 HNTLEIVRPREKGVRYDVQMHG-TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGR 386 (751)
T ss_dssp CCCEEESSCCCTTCCEEEEEET-TTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEE
T ss_pred CceeEEeecCCCCceEEEeeee-CCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEE
Confidence 22 02332 2334556666544 5544 444333 36777787642 2 2 2211222245666665332333334
Q ss_pred cCC--cEEEEeC
Q 048118 229 TEQ--SIKIWDL 238 (303)
Q Consensus 229 ~~~--~i~iwd~ 238 (303)
.++ .|+++|+
T Consensus 387 ~~g~~~l~~~dl 398 (751)
T 2xe4_A 387 RAGLTRIWTMMA 398 (751)
T ss_dssp ETTEEEEEEEEC
T ss_pred eCCEEEEEEEec
Confidence 455 4677775
No 260
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.67 E-value=0.037 Score=51.62 Aligned_cols=158 Identities=11% Similarity=0.120 Sum_probs=102.7
Q ss_pred cCCEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeec----CCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEEC
Q 048118 81 TKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQE----GDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNL 156 (303)
Q Consensus 81 ~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~ 156 (303)
...|.++...++|.+.+ |+.++-|..++........... .......|.++...+++ .+-.|+.++-|..|+.
T Consensus 309 ~~~i~~i~~D~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g---~lWiGt~~~Gl~~~~~ 384 (795)
T 4a2l_A 309 QRSVRSIFMDSQGGMWL-GTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDK---NLWIGTNDGGLNLYNP 384 (795)
T ss_dssp SSCEEEEEECTTSCEEE-EESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTS---CEEEEESSSCEEEECT
T ss_pred CCcEEEEEEeCCcCEEE-EECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCC---CEEEEECCCCeEEEcC
Confidence 35688888888887554 6666778888754322111111 01123458888887764 3556777778999998
Q ss_pred CCceeEEEEcC--------CCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEec-----CCCeEEEEEEcCCCe
Q 048118 157 SNCKLRATLAG--------HTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLD-----AGAVIHALCFSPNRY 223 (303)
Q Consensus 157 ~~~~~~~~~~~--------~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~-----~~~~v~~~~~s~~~~ 223 (303)
.+++....... ....|.++...++++.|-.|+.++-+..+|..+++...-.. ....|.++...+++.
T Consensus 385 ~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~ 464 (795)
T 4a2l_A 385 ITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGN 464 (795)
T ss_dssp TTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSC
T ss_pred CCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCC
Confidence 76654332211 13568899888888845567777789999988765432211 235688888888777
Q ss_pred EEEEEcCCcEEEEeCCCCce
Q 048118 224 WLCAATEQSIKIWDLESKSI 243 (303)
Q Consensus 224 ~l~~~~~~~i~iwd~~~~~~ 243 (303)
+.+++. +.+.+||.++++.
T Consensus 465 lwigt~-~Gl~~~~~~~~~~ 483 (795)
T 4a2l_A 465 LWLGTL-SALVRFNPEQRSF 483 (795)
T ss_dssp EEEEES-SCEEEEETTTTEE
T ss_pred EEEEec-CceeEEeCCCCeE
Confidence 655555 6799999877654
No 261
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.67 E-value=0.02 Score=48.52 Aligned_cols=162 Identities=12% Similarity=0.021 Sum_probs=93.2
Q ss_pred EEEEEEeeCCCE-EEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCC-CcEEEEECCCcee
Q 048118 84 VLSVAFSIDNRQ-IVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWD-RTVKVWNLSNCKL 161 (303)
Q Consensus 84 i~~i~~~~~~~~-l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d-g~i~iwd~~~~~~ 161 (303)
...+++.+.+.. +++-...+.|.+.+..+.....+.. ........++++|... ..+++-... +.|..+++.....
T Consensus 161 p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~--~~l~~P~giavdp~~g-~ly~td~~~~~~I~r~~~dG~~~ 237 (386)
T 3v65_B 161 PGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW--QSLEKPRAIALHPMEG-TIYWTDWGNTPRIEASSMDGSGR 237 (386)
T ss_dssp CCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEEC--SSCSCEEEEEEETTTT-EEEEEECSSSCEEEEEETTSCSC
T ss_pred ccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeec--CCCCCCcEEEEEcCCC-eEEEeccCCCCEEEEEeCCCCCc
Confidence 356778875544 4454556778887776543322221 1223457888988642 223333333 6788888765433
Q ss_pred EEEEcCCCCCeeEEEECCCCCEEE-EEeCCCeEEEEeCCCCceEEEec-CCCeEEEEEEcCCCeEEEEEcCCcEEEEeCC
Q 048118 162 RATLAGHTGYVNTVAVSPDGSLCA-SGGKDGVILLWDLAEGKRLYSLD-AGAVIHALCFSPNRYWLCAATEQSIKIWDLE 239 (303)
Q Consensus 162 ~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~ 239 (303)
.......-.....++++|++..|. +-+..+.|..+|+........+. .......+++..+..+.+-...+.|..+|..
T Consensus 238 ~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~ 317 (386)
T 3v65_B 238 RIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKF 317 (386)
T ss_dssp EEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETT
T ss_pred EEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEECCEEEEeeCCCCeEEEEECC
Confidence 332333334568899998666554 44567889999986543322222 2234566777544444444457789999866
Q ss_pred CCceeeeee
Q 048118 240 SKSIVEDLK 248 (303)
Q Consensus 240 ~~~~~~~~~ 248 (303)
+++....+.
T Consensus 318 ~G~~~~~i~ 326 (386)
T 3v65_B 318 TGKNQEIIR 326 (386)
T ss_dssp TCCSCEEEE
T ss_pred CCcceEEEc
Confidence 665554443
No 262
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.62 E-value=0.021 Score=47.62 Aligned_cols=162 Identities=12% Similarity=0.010 Sum_probs=93.0
Q ss_pred CEEEEEEeeCCC-EEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCC-CcEEEEECCCce
Q 048118 83 DVLSVAFSIDNR-QIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWD-RTVKVWNLSNCK 160 (303)
Q Consensus 83 ~i~~i~~~~~~~-~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d-g~i~iwd~~~~~ 160 (303)
....+++.+.+. +..+-...+.|.+.+..+.....+.. ..-.....++++|... ..+.+-... +.|..+++....
T Consensus 117 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~--~~l~~P~~iavdp~~g-~ly~td~~~~~~I~r~~~dG~~ 193 (349)
T 3v64_C 117 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW--QSLEKPRAIALHPMEG-TIYWTDWGNTPRIEASSMDGSG 193 (349)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--TTCSCEEEEEEETTTT-EEEEEECSSSCEEEEEETTSCS
T ss_pred CccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEe--CCCCCcceEEEecCcC-eEEEeccCCCCEEEEEeCCCCC
Confidence 345788887554 44555556788888876543322221 1223457889998642 233333333 778888876433
Q ss_pred eEEEEcCCCCCeeEEEECCCCCEEE-EEeCCCeEEEEeCCCCceEEEec-CCCeEEEEEEcCCCeEEEEEcCCcEEEEeC
Q 048118 161 LRATLAGHTGYVNTVAVSPDGSLCA-SGGKDGVILLWDLAEGKRLYSLD-AGAVIHALCFSPNRYWLCAATEQSIKIWDL 238 (303)
Q Consensus 161 ~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~i~iwd~ 238 (303)
........-.....++++|++..|. +-+..++|..+|+........+. .......+++..+..+.+-...+.|..+|.
T Consensus 194 ~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~ 273 (349)
T 3v64_C 194 RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANK 273 (349)
T ss_dssp CEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred cEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEECCEEEEecCCCCeEEEEEc
Confidence 2221222234568899998666554 44457899999987543222222 123455677754444444445778888886
Q ss_pred CCCceeeee
Q 048118 239 ESKSIVEDL 247 (303)
Q Consensus 239 ~~~~~~~~~ 247 (303)
.+++....+
T Consensus 274 ~~G~~~~~i 282 (349)
T 3v64_C 274 FTGKNQEII 282 (349)
T ss_dssp TTCCSCEEE
T ss_pred cCCCccEEe
Confidence 566554444
No 263
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.61 E-value=0.011 Score=53.86 Aligned_cols=75 Identities=7% Similarity=0.144 Sum_probs=44.0
Q ss_pred EEEEeeCCCEEEEEeC-CCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEe-CC-----CcEEEEECCC
Q 048118 86 SVAFSIDNRQIVSASR-DRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSAS-WD-----RTVKVWNLSN 158 (303)
Q Consensus 86 ~i~~~~~~~~l~t~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~d-----g~i~iwd~~~ 158 (303)
++++..++.+++.|+. +..+.+||............. ....-.++...+++ ..++.|+ .+ ..+.+||..+
T Consensus 247 ~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~-~~R~~~s~~~~~dg--~iyv~GG~~~~~~~~~~~e~yd~~t 323 (656)
T 1k3i_A 247 GISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQ-VARGYQSSATMSDG--RVFTIGGSWSGGVFEKNGEVYSPSS 323 (656)
T ss_dssp EEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCS-SCCSSCEEEECTTS--CEEEECCCCCSSSCCCCEEEEETTT
T ss_pred cccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCC-ccccccceEEecCC--eEEEEeCcccCCcccccceEeCCCC
Confidence 4566788999998884 457999997654332221111 11111234444454 3566666 34 5689999987
Q ss_pred ceeEE
Q 048118 159 CKLRA 163 (303)
Q Consensus 159 ~~~~~ 163 (303)
++...
T Consensus 324 ~~W~~ 328 (656)
T 1k3i_A 324 KTWTS 328 (656)
T ss_dssp TEEEE
T ss_pred Cccee
Confidence 76443
No 264
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.59 E-value=0.027 Score=47.97 Aligned_cols=163 Identities=13% Similarity=0.014 Sum_probs=97.5
Q ss_pred CCEEEEEEeeC-CCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEe--CCCcEEEEECCC
Q 048118 82 KDVLSVAFSID-NRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSAS--WDRTVKVWNLSN 158 (303)
Q Consensus 82 ~~i~~i~~~~~-~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--~dg~i~iwd~~~ 158 (303)
..+..+++.+. +.+..+-...+.|.+.+..+.....+... .-.....++++|.. ..+.... ..+.|...++..
T Consensus 159 ~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~--~~~~P~~iavdp~~--g~ly~td~~~~~~I~~~~~dG 234 (400)
T 3p5b_L 159 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE--NGSKPRAIVVDPVH--GFMYWTDWGTPAKIKKGGLNG 234 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEEC--SSCCEEEEEEETTT--TEEEEEECSSSCCEEEEETTS
T ss_pred CCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeC--CCCCcceEEEeccc--CeEEEEeCCCCCEEEEEeCCC
Confidence 35678888874 44455555667888888765433333221 12235788999864 2344333 247888888865
Q ss_pred ceeEEEEcCCCCCeeEEEECCCCCEEEEE-eCCCeEEEEeCCCCceEEEec---CCCeEEEEEEcCCCeEEEEEcCCcEE
Q 048118 159 CKLRATLAGHTGYVNTVAVSPDGSLCASG-GKDGVILLWDLAEGKRLYSLD---AGAVIHALCFSPNRYWLCAATEQSIK 234 (303)
Q Consensus 159 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~v~iwd~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~~~~~~~i~ 234 (303)
..........-.....++++|++..|..+ +..++|..+|+.......... .-.....+++..+..+.+-...+.|.
T Consensus 235 ~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~~~~V~ 314 (400)
T 3p5b_L 235 VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIF 314 (400)
T ss_dssp CSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEESSSCSEE
T ss_pred CccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecCCCCeEE
Confidence 44333333333567889999877766555 457899999986543322111 12334566665444444444568899
Q ss_pred EEeCCCCceeeeee
Q 048118 235 IWDLESKSIVEDLK 248 (303)
Q Consensus 235 iwd~~~~~~~~~~~ 248 (303)
.+|..+++.+..+.
T Consensus 315 ~~~~~~G~~~~~i~ 328 (400)
T 3p5b_L 315 SANRLTGSDVNLLA 328 (400)
T ss_dssp EEESSSCCCCEEEE
T ss_pred EEEcCCCCceEEEe
Confidence 99977776555443
No 265
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.58 E-value=0.019 Score=47.11 Aligned_cols=158 Identities=9% Similarity=0.079 Sum_probs=99.2
Q ss_pred eEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEE-EcC----CCC--CeeEEEE---CCCCCEEEEEe---------
Q 048118 128 VSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRAT-LAG----HTG--YVNTVAV---SPDGSLCASGG--------- 188 (303)
Q Consensus 128 i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~-~~~----~~~--~i~~~~~---~~~~~~l~~~~--------- 188 (303)
..+++|++.. ....++.-..+.|..||...+..... +.+ ... .+..+.+ .|+++++++..
T Consensus 15 PE~~~wd~~~-g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g 93 (334)
T 2p9w_A 15 PEDTIYDRTR-QVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFAD 93 (334)
T ss_dssp CSCEEEETTT-TEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTS
T ss_pred CcCccCcCCC-CEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccc
Confidence 3467888753 22344444789999999875543332 222 111 3578999 68887777543
Q ss_pred ----CCCeEEEEeCC---CCceEEEecC--------------CCeEEEEEEcCCCeEEE-EEcC-CcEEEEeCCCCceee
Q 048118 189 ----KDGVILLWDLA---EGKRLYSLDA--------------GAVIHALCFSPNRYWLC-AATE-QSIKIWDLESKSIVE 245 (303)
Q Consensus 189 ----~d~~v~iwd~~---~~~~~~~~~~--------------~~~v~~~~~s~~~~~l~-~~~~-~~i~iwd~~~~~~~~ 245 (303)
.+..|..+|+. +++.+..... ....+.++..++|...+ .+.. +.|...+.......
T Consensus 94 ~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~- 172 (334)
T 2p9w_A 94 QSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVS- 172 (334)
T ss_dssp CCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEE-
T ss_pred cccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEe-
Confidence 26789999999 7776655432 12488999999986554 5556 77887776544221
Q ss_pred eeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEecc
Q 048118 246 DLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~ 301 (303)
...... .. .......+.|+++|++.+|++...+|.+..+|+.
T Consensus 173 ~~~~~~-------~~-------~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 173 TFAWES-------GN-------GGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp EEEECC-------CC-------SSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred eeeecC-------CC-------cccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 111100 00 0011223568999999988888779999999864
No 266
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.57 E-value=0.023 Score=46.65 Aligned_cols=206 Identities=15% Similarity=0.075 Sum_probs=113.6
Q ss_pred eeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEeeCCC-EE
Q 048118 18 VTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSIDNR-QI 96 (303)
Q Consensus 18 v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~~~~-~l 96 (303)
...+.|++.+..++++-...+.|..+++........ . . ..+. ..-..+..+++.+.+. +.
T Consensus 32 p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~-~-----------~-~~~~------~~~~~p~glavd~~~~~ly 92 (316)
T 1ijq_A 32 VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSS-Y-----------D-TVIS------RDIQAPDGLAVDWIHSNIY 92 (316)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEC---------C-----------E-EEEC------SSCSCCCEEEEETTTTEEE
T ss_pred eEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcc-c-----------E-EEEe------CCCCCcCEEEEeecCCeEE
Confidence 456777766555666666667777777643100000 0 0 0000 0112345788886554 44
Q ss_pred EEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeC-C-CcEEEEECCCceeEEEE-cCCCCCee
Q 048118 97 VSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASW-D-RTVKVWNLSNCKLRATL-AGHTGYVN 173 (303)
Q Consensus 97 ~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-d-g~i~iwd~~~~~~~~~~-~~~~~~i~ 173 (303)
++-...+.|.+.+..+.....+... .-.....++++|... .+..... . +.|..+++.... ...+ ...-....
T Consensus 93 ~~d~~~~~I~~~~~~g~~~~~~~~~--~~~~P~~iavdp~~g--~ly~~d~~~~~~I~~~~~dG~~-~~~~~~~~~~~P~ 167 (316)
T 1ijq_A 93 WTDSVLGTVSVADTKGVKRKTLFRE--NGSKPRAIVVDPVHG--FMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQWPN 167 (316)
T ss_dssp EEETTTTEEEEEETTSSSEEEEEEC--TTCCEEEEEEETTTT--EEEEEECSSSCEEEEEETTSCC-EEEEECSSCSCEE
T ss_pred EEECCCCEEEEEeCCCCceEEEEEC--CCCCcceEEeCCCCC--EEEEEccCCCCeEEEEcCCCCC-eEEEEECCCCCce
Confidence 5555678899988765433222221 123457888988542 3433333 2 678888875433 3333 22234567
Q ss_pred EEEECCCCCEEEEE-eCCCeEEEEeCCCCce--EEEec-CCCeEEEEEEcCCCeEEEEEcCCcEEEEeCCCCceeeee
Q 048118 174 TVAVSPDGSLCASG-GKDGVILLWDLAEGKR--LYSLD-AGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDL 247 (303)
Q Consensus 174 ~~~~~~~~~~l~~~-~~d~~v~iwd~~~~~~--~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~ 247 (303)
.++++|++..|..+ +..++|..+|+..... +.... .......+++..+..+.+-...+.|..+|..+++.+..+
T Consensus 168 gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~~d~~~~~V~~~~~~~g~~~~~i 245 (316)
T 1ijq_A 168 GITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLL 245 (316)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred EEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEECCEEEEEECCCCeEEEEeCCCCcceEEE
Confidence 89999877666444 4577999999874322 22211 123455677754433444445678999998766655444
No 267
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.49 E-value=0.0099 Score=51.20 Aligned_cols=152 Identities=9% Similarity=0.101 Sum_probs=89.4
Q ss_pred eEEEEEcC-CCCCCEEEEEeCCCcEEEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEeC-CC----eEEEEeCCCC
Q 048118 128 VSCVRFSP-NTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGK-DG----VILLWDLAEG 201 (303)
Q Consensus 128 i~~~~~~~-~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~----~v~iwd~~~~ 201 (303)
...++++| +. ..+..+...+.|+.+|+.+++...... .......++++++++.|.++.. .+ .+.+.+....
T Consensus 139 P~~lavdp~~~--g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~ 215 (430)
T 3tc9_A 139 AVWLSFDPKNH--NHLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESG 215 (430)
T ss_dssp CCEEEEETTEE--EEEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGT
T ss_pred CCEEEECCCCC--CeEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCc
Confidence 45788887 33 234444444889999998766544333 3456788999999996655543 22 3444443221
Q ss_pred ce-EEEecCCCeEEEEEEcC-CCeEEEEE-cCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEE
Q 048118 202 KR-LYSLDAGAVIHALCFSP-NRYWLCAA-TEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLN 278 (303)
Q Consensus 202 ~~-~~~~~~~~~v~~~~~s~-~~~~l~~~-~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (303)
.. ...+........++++| ++.++++. ..++|+.++...+........ . .......++
T Consensus 216 ~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~------------------~-~~~~P~gia 276 (430)
T 3tc9_A 216 FKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTI------------------Q-DSGWEFHIQ 276 (430)
T ss_dssp SCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEEC------------------S-SSSCCEEEE
T ss_pred eeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEc------------------C-CCCcceeEE
Confidence 11 11222223345678899 66655544 467899999876543211110 0 011235689
Q ss_pred EcCCCCE-EEEeecCCeEEEEecc
Q 048118 279 WSVDGST-LFSGYTDGVIRVWGIG 301 (303)
Q Consensus 279 ~sp~~~~-l~~gs~Dg~v~~w~~~ 301 (303)
|+|++++ +++-...+.|..++.+
T Consensus 277 ~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 277 FHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEEE
T ss_pred EcCCCCEEEEEECCCCEEEEEeCC
Confidence 9999994 4555677888887753
No 268
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.45 E-value=0.046 Score=47.08 Aligned_cols=152 Identities=14% Similarity=0.183 Sum_probs=86.1
Q ss_pred CCEEEEEEeeC--CCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCC---C-cEEEEE
Q 048118 82 KDVLSVAFSID--NRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWD---R-TVKVWN 155 (303)
Q Consensus 82 ~~i~~i~~~~~--~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d---g-~i~iwd 155 (303)
.....++|+|+ ...|..+...+.|+.++........+.. .......+++++++. .+++-... . .+...+
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~---~~~~P~giavd~dG~--lyVad~~~~~~~~gv~~~~ 213 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT---NIGQCADVNFTLNGD--MVVVDDQSSDTNTGIYLFT 213 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC---CCSCEEEEEECTTCC--EEEEECCSCTTSEEEEEEC
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec---CCCCccEEEECCCCC--EEEEcCCCCcccceEEEEE
Confidence 34678999984 3445445444889999875443333221 223467899999863 33333211 1 133333
Q ss_pred CCCcee-EEEEcCCCCCeeEEEECC-CCCEEEEEeCCCeEEEEeCCCCceEEE---ecCCCeEEEEEEcCCCeEEEEE--
Q 048118 156 LSNCKL-RATLAGHTGYVNTVAVSP-DGSLCASGGKDGVILLWDLAEGKRLYS---LDAGAVIHALCFSPNRYWLCAA-- 228 (303)
Q Consensus 156 ~~~~~~-~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~v~iwd~~~~~~~~~---~~~~~~v~~~~~s~~~~~l~~~-- 228 (303)
...... ...+. .......++++| ++.++++-..+++|+.+|..++..... ......-..++|+|++..|..+
T Consensus 214 ~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~ 292 (433)
T 4hw6_A 214 RASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYN 292 (433)
T ss_dssp GGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEET
T ss_pred CCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeC
Confidence 221111 11121 123456688999 677666666788999999886654222 2222223469999998643333
Q ss_pred cCCcEEEEeCC
Q 048118 229 TEQSIKIWDLE 239 (303)
Q Consensus 229 ~~~~i~iwd~~ 239 (303)
..+.|+.++..
T Consensus 293 ~~~~I~~~~~d 303 (433)
T 4hw6_A 293 GKHCIYRVDYN 303 (433)
T ss_dssp TTTEEEEEEBC
T ss_pred CCCEEEEEeCC
Confidence 46789998765
No 269
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.44 E-value=0.011 Score=51.02 Aligned_cols=150 Identities=11% Similarity=0.205 Sum_probs=89.9
Q ss_pred CEEEEEEee-CCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeC-CC----cEEEEEC
Q 048118 83 DVLSVAFSI-DNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASW-DR----TVKVWNL 156 (303)
Q Consensus 83 ~i~~i~~~~-~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-dg----~i~iwd~ 156 (303)
....++++| ++..|..+...+.|+.+|..+.....+.. .......+++++++ ..+..+.. ++ .+..++.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~---~~~~P~~ia~d~~G--~~lyvad~~~~~~~~~v~~~~~ 212 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS---GLSKVRTICWTHEA--DSMIITNDQNNNDRPNNYILTR 212 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC---CCSCEEEEEECTTS--SEEEEEECCSCTTSEEEEEEEG
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec---CCCCcceEEEeCCC--CEEEEEeCCCCcccceEEEEeC
Confidence 467899997 35555555555788888876543333322 22346789999876 33443333 22 2333443
Q ss_pred CCceeE--EEEcCCCCCeeEEEECC-CCCEEEEEeCCCeEEEEeCCCCce--EEEecCCCeEEEEEEcCCCeEEEEE--c
Q 048118 157 SNCKLR--ATLAGHTGYVNTVAVSP-DGSLCASGGKDGVILLWDLAEGKR--LYSLDAGAVIHALCFSPNRYWLCAA--T 229 (303)
Q Consensus 157 ~~~~~~--~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~v~iwd~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~~--~ 229 (303)
. +... ..+.. ......++++| ++.++++-...++|..++...+.. +.........+.++|+|++.+|..+ .
T Consensus 213 ~-g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~ 290 (430)
T 3tc9_A 213 E-SGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVN 290 (430)
T ss_dssp G-GTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETT
T ss_pred C-Cceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECC
Confidence 2 2211 22221 23456788999 677766666788999999876654 2222223456789999998744333 4
Q ss_pred CCcEEEEeCC
Q 048118 230 EQSIKIWDLE 239 (303)
Q Consensus 230 ~~~i~iwd~~ 239 (303)
.+.|+.++.+
T Consensus 291 ~~~I~~~~~d 300 (430)
T 3tc9_A 291 QHYILRSDYD 300 (430)
T ss_dssp TTEEEEEEEE
T ss_pred CCEEEEEeCC
Confidence 6789887764
No 270
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.41 E-value=0.037 Score=45.08 Aligned_cols=191 Identities=13% Similarity=0.062 Sum_probs=106.0
Q ss_pred CEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEe-CCC-cEEEEECCCce
Q 048118 83 DVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSAS-WDR-TVKVWNLSNCK 160 (303)
Q Consensus 83 ~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~dg-~i~iwd~~~~~ 160 (303)
....++|++++.++++-..++.|..|+..+....... . ......+++.+++. .+++.. .++ .|..+|..+++
T Consensus 33 ~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~-~---~~~p~gia~~~dG~--l~vad~~~~~~~v~~~d~~~g~ 106 (306)
T 2p4o_A 33 FLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHAT-V---EGKVSGLAFTSNGD--LVATGWNADSIPVVSLVKSDGT 106 (306)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEE-C---SSEEEEEEECTTSC--EEEEEECTTSCEEEEEECTTSC
T ss_pred CcceEEECCCCCEEEEeCCCCeEEEECCCCceEEEEe-C---CCCceeEEEcCCCc--EEEEeccCCcceEEEEcCCCCe
Confidence 4568999999887777667888999987654322221 1 13477899998862 344332 222 46667776766
Q ss_pred eEEEEcC-CCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCc-eEEEe--------c--CCCeEEEEEEcCCCeEEE--
Q 048118 161 LRATLAG-HTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK-RLYSL--------D--AGAVIHALCFSPNRYWLC-- 226 (303)
Q Consensus 161 ~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~-~~~~~--------~--~~~~v~~~~~s~~~~~l~-- 226 (303)
....... .......++..+++..+++...++.|.++|...++ .+... . .....+.+ ++++..+.
T Consensus 107 ~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~ 184 (306)
T 2p4o_A 107 VETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVS 184 (306)
T ss_dssp EEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEE
T ss_pred EEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEE
Confidence 5432221 12233455555655555555568899999986543 22110 0 11234445 66664333
Q ss_pred EEcCCcEEEEeCCC-CceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEec
Q 048118 227 AATEQSIKIWDLES-KSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 300 (303)
Q Consensus 227 ~~~~~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~ 300 (303)
-...+.|+.|++.. +++ ....... .. .....+++.++|.+.++....+.|.+++.
T Consensus 185 d~~~~~I~~~~~~~~g~~-~~~~~~~--------------~~----~~P~gi~vd~dG~l~va~~~~~~V~~~~~ 240 (306)
T 2p4o_A 185 NTEKMLLLRIPVDSTDKP-GEPEIFV--------------EQ----TNIDDFAFDVEGNLYGATHIYNSVVRIAP 240 (306)
T ss_dssp ETTTTEEEEEEBCTTSCB-CCCEEEE--------------ES----CCCSSEEEBTTCCEEEECBTTCCEEEECT
T ss_pred eCCCCEEEEEEeCCCCCC-CccEEEe--------------cc----CCCCCeEECCCCCEEEEeCCCCeEEEECC
Confidence 33467899999864 221 1110000 00 11234667777776666666677777764
No 271
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.38 E-value=0.0044 Score=56.66 Aligned_cols=163 Identities=10% Similarity=0.107 Sum_probs=98.0
Q ss_pred EEEEeeCCCEEEEEeCCC-------------------cEEEEecCC-ceeeeeecCCCCc-------cceEEEEEcCCCC
Q 048118 86 SVAFSIDNRQIVSASRDR-------------------TIKLWNTLG-ECKYTIQEGDAHT-------EWVSCVRFSPNTL 138 (303)
Q Consensus 86 ~i~~~~~~~~l~t~~~d~-------------------~i~vw~~~~-~~~~~~~~~~~~~-------~~i~~~~~~~~~~ 138 (303)
.+++.++..+++.+..++ .|..+|..+ +..+..+.. .|. .+.....+..++.
T Consensus 234 ~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~-~~~~wd~~~~~~~~~~d~~~~G~ 312 (668)
T 1kv9_A 234 SMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVT-PGDSWDFTATQQITLAELNIDGK 312 (668)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESS-TTCCSCCCCCSCEEEEEEEETTE
T ss_pred ceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecC-CCccccccCCCCcEEEEeccCCc
Confidence 367788878888777665 377777643 333333321 111 1111111112221
Q ss_pred -CCEEEEEeCCCcEEEEECCCceeEEEEcCCC------------CC------------------------eeEEEECCCC
Q 048118 139 -QPTIVSASWDRTVKVWNLSNCKLRATLAGHT------------GY------------------------VNTVAVSPDG 181 (303)
Q Consensus 139 -~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~------------~~------------------------i~~~~~~~~~ 181 (303)
...++.++.+|.++++|..+++.+....... .+ -..++++|+.
T Consensus 313 ~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~ 392 (668)
T 1kv9_A 313 PRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGT 392 (668)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTT
T ss_pred EEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCC
Confidence 1257888999999999999988764322110 00 0125677776
Q ss_pred CEEEEE------------------------------------eCCCeEEEEeCCCCceEEEecCCCeEEEEEEc-CCCeE
Q 048118 182 SLCASG------------------------------------GKDGVILLWDLAEGKRLYSLDAGAVIHALCFS-PNRYW 224 (303)
Q Consensus 182 ~~l~~~------------------------------------~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s-~~~~~ 224 (303)
..+.+. ..+|.|..||+.+++.+.+...........+. .++.+
T Consensus 393 g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v 472 (668)
T 1kv9_A 393 GLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLV 472 (668)
T ss_dssp TEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEE
T ss_pred CEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEE
Confidence 655431 12488999999999988776543322221222 35566
Q ss_pred EEEEcCCcEEEEeCCCCceeeeeee
Q 048118 225 LCAATEQSIKIWDLESKSIVEDLKV 249 (303)
Q Consensus 225 l~~~~~~~i~iwd~~~~~~~~~~~~ 249 (303)
++++.++.++.||.++++++..++.
T Consensus 473 f~g~~dg~l~a~d~~tG~~l~~~~~ 497 (668)
T 1kv9_A 473 FQGTAAGQMHAYSADKGEALWQFEA 497 (668)
T ss_dssp EEECTTSEEEEEETTTCCEEEEEEC
T ss_pred EEECCcccchhhhhhcChhheEecC
Confidence 6677799999999999999877664
No 272
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.36 E-value=0.052 Score=45.90 Aligned_cols=157 Identities=13% Similarity=-0.016 Sum_probs=92.3
Q ss_pred CCEEEEEEeeCCCEE-EEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCce
Q 048118 82 KDVLSVAFSIDNRQI-VSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCK 160 (303)
Q Consensus 82 ~~i~~i~~~~~~~~l-~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~ 160 (303)
..+..++|++....| .+-...+.|..++..+.....+... .......+++++.. ....++-...+.|.+.++....
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~--~~~~p~glavd~~~-g~lY~~d~~~~~I~~~~~dg~~ 192 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST--GLESPGGLAVDWVH-DKLYWTDSGTSRIEVANLDGAH 192 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECS--SCSCCCCEEEETTT-TEEEEEETTTTEEEECBTTSCS
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeC--CCCCccEEEEEeCC-CeEEEEcCCCCeEEEEeCCCCc
Confidence 356789999765544 4445667788888765432222211 11123457777643 2234444556788888876544
Q ss_pred eEEEEcCCCCCeeEEEECCCCCEEEEE-eCC-CeEEEEeCCCCceEEEec-CCCeEEEEEEcCCC-eEEEE-EcCCcEEE
Q 048118 161 LRATLAGHTGYVNTVAVSPDGSLCASG-GKD-GVILLWDLAEGKRLYSLD-AGAVIHALCFSPNR-YWLCA-ATEQSIKI 235 (303)
Q Consensus 161 ~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d-~~v~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~-~~l~~-~~~~~i~i 235 (303)
....+.........++++|.+..|..+ ... +.|...++.......... .-...+.++++|++ .+..+ +..+.|+.
T Consensus 193 ~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~ 272 (386)
T 3v65_B 193 RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIER 272 (386)
T ss_dssp CEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEE
T ss_pred eEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEE
Confidence 333333334567889999876655444 344 788888886543322222 23457789999764 33333 34678999
Q ss_pred EeCCCC
Q 048118 236 WDLESK 241 (303)
Q Consensus 236 wd~~~~ 241 (303)
+|+...
T Consensus 273 ~d~dG~ 278 (386)
T 3v65_B 273 ANLDGS 278 (386)
T ss_dssp ECTTSC
T ss_pred EeCCCC
Confidence 998643
No 273
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.33 E-value=0.063 Score=48.11 Aligned_cols=60 Identities=13% Similarity=0.153 Sum_probs=43.1
Q ss_pred CCeEEEEeCCCCceEEEecCCCeEEE-EEEcCCCeEEEEEcCCcEEEEeCCCCceeeeeee
Q 048118 190 DGVILLWDLAEGKRLYSLDAGAVIHA-LCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKV 249 (303)
Q Consensus 190 d~~v~iwd~~~~~~~~~~~~~~~v~~-~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~~~ 249 (303)
+|.|..||+.+++.+.+......+.. .....++.++.++.|+.++.||.++++++.+.+.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~ 525 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQT 525 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred cceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecC
Confidence 68899999999998877643322211 1111356777777899999999999999887664
No 274
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.31 E-value=0.0029 Score=58.15 Aligned_cols=161 Identities=14% Similarity=0.030 Sum_probs=88.0
Q ss_pred EEEEEeeCC-CEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEE-eCCCcEEEEECCCceeE
Q 048118 85 LSVAFSIDN-RQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSA-SWDRTVKVWNLSNCKLR 162 (303)
Q Consensus 85 ~~i~~~~~~-~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~dg~i~iwd~~~~~~~ 162 (303)
..|++.+.+ .++++-...+.|.+.+..+.....+... .......++++|.... ++++- +..+.|..+++......
T Consensus 456 ~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~--~~~~P~giavDp~~g~-ly~td~~~~~~I~~~~~dG~~~~ 532 (699)
T 1n7d_A 456 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE--QGSKPRAIVVDPVHGF-MYWTDWGTPAKIKKGGLNGVDIY 532 (699)
T ss_dssp CCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCC--SSCCCCCEECCSSSSC-CEECCCSSSCCEEBCCSSSCCCC
T ss_pred ceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeC--CCCCcceEEEccCCCc-EEEcccCCCCeEEEEeCCCCCee
Confidence 456777543 4444445567888888765433222211 1122456778875422 22222 22367887776543222
Q ss_pred EEEcCCCCCeeEEEECCCCC-EEEEEeCCCeEEEEeCCCCceEEEecC---CCeEEEEEEcCCCeEEEEEcCCcEEEEeC
Q 048118 163 ATLAGHTGYVNTVAVSPDGS-LCASGGKDGVILLWDLAEGKRLYSLDA---GAVIHALCFSPNRYWLCAATEQSIKIWDL 238 (303)
Q Consensus 163 ~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~~~~~~~i~iwd~ 238 (303)
..+...-.....|+++|++. ++.+-+..++|.++|+........+.. ......+++..+..+++....+.|..+|.
T Consensus 533 ~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~ 612 (699)
T 1n7d_A 533 SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANR 612 (699)
T ss_dssp EESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEET
T ss_pred EEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEc
Confidence 22222223456899998755 445555678999999864332211111 12223455555544444445688999998
Q ss_pred CCCceeeeee
Q 048118 239 ESKSIVEDLK 248 (303)
Q Consensus 239 ~~~~~~~~~~ 248 (303)
.+++.+..+.
T Consensus 613 ~~G~~~~~i~ 622 (699)
T 1n7d_A 613 LTGSDVNLLA 622 (699)
T ss_dssp TTEEEEECCC
T ss_pred cCCCceEEee
Confidence 8887766654
No 275
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.30 E-value=0.031 Score=47.45 Aligned_cols=140 Identities=19% Similarity=0.229 Sum_probs=86.0
Q ss_pred CCCcEEEEECCCceeEEEEcCC----CCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCc------------eEEEec--
Q 048118 147 WDRTVKVWNLSNCKLRATLAGH----TGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK------------RLYSLD-- 208 (303)
Q Consensus 147 ~dg~i~iwd~~~~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~------------~~~~~~-- 208 (303)
.++.||..++......+.+.-. -..+..+..+|+|.+||..+ +..|.|..+..+. ..+.+.
T Consensus 39 ~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~ 117 (452)
T 3pbp_A 39 QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSID 117 (452)
T ss_dssp ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGG
T ss_pred ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcC
Confidence 3466777776643333333322 23578899999999998886 4689998887321 112221
Q ss_pred -----CCCeEEEEEEcCC----CeEEEEEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEE
Q 048118 209 -----AGAVIHALCFSPN----RYWLCAATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNW 279 (303)
Q Consensus 209 -----~~~~v~~~~~s~~----~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (303)
...+|.++.|+|- ..+++..+|+.|++||+........ .++.. . ..+.......-+.+++|
T Consensus 118 ~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~---~L~k~-----~--~~fg~d~~~~ev~S~~F 187 (452)
T 3pbp_A 118 EEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI---VLNKP-----N--NSFGLDARVNDITDLEF 187 (452)
T ss_dssp GCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE---EESCC-----C--SEEESCSSCCCEEEEEE
T ss_pred CcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc---chhcc-----c--cccCCCcccceEEEEEE
Confidence 2467999999995 4677888999999999976332111 11100 0 00111112244678999
Q ss_pred cCCCCEEEE--eecCCeEEE
Q 048118 280 SVDGSTLFS--GYTDGVIRV 297 (303)
Q Consensus 280 sp~~~~l~~--gs~Dg~v~~ 297 (303)
+.++-.|.. ....|.|+.
T Consensus 188 g~~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 188 SKDGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp CTTSSCEEEEECTTSCEEEE
T ss_pred cCCCcEEEEEecCCCCCEEE
Confidence 998876666 447788754
No 276
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.30 E-value=0.11 Score=48.33 Aligned_cols=156 Identities=8% Similarity=0.085 Sum_probs=99.5
Q ss_pred CCEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecC------CCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEE
Q 048118 82 KDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEG------DAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWN 155 (303)
Q Consensus 82 ~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~------~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd 155 (303)
..|.++...++|.+.+ |..++-|..|+............ ......|.++...+++ ..+-.|+.++-+..||
T Consensus 357 ~~V~~i~~d~~g~lWi-Gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g--~~lWigt~~~Gl~~~d 433 (795)
T 4a2l_A 357 NVVSCIVEDKDKNLWI-GTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKK--SLVYIGTHAGGLSILH 433 (795)
T ss_dssp SSEEEEEECTTSCEEE-EESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTT--TEEEEEETTTEEEEEE
T ss_pred CeeEEEEECCCCCEEE-EECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCC--CEEEEEeCcCceeEEe
Confidence 4688888888776554 66776788888754322111111 1123568888877654 2256677777799999
Q ss_pred CCCceeEEEEc----CCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEec-------CCCeEEEEEEcCCCeE
Q 048118 156 LSNCKLRATLA----GHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLD-------AGAVIHALCFSPNRYW 224 (303)
Q Consensus 156 ~~~~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~-------~~~~v~~~~~s~~~~~ 224 (303)
..+++...... .....|.++...+++++.+.. . +.+..||..+++...... ....|.++...+++.+
T Consensus 434 ~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~l 511 (795)
T 4a2l_A 434 RNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-L-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRL 511 (795)
T ss_dssp TTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-S-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCE
T ss_pred CCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-c-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCE
Confidence 88766543221 123578899988888766544 3 458889987664322111 1256888988888865
Q ss_pred EEEEcCCcEEEEeCCCCce
Q 048118 225 LCAATEQSIKIWDLESKSI 243 (303)
Q Consensus 225 l~~~~~~~i~iwd~~~~~~ 243 (303)
.+++. +.|..||.++++.
T Consensus 512 Wigt~-~Gl~~~~~~~~~~ 529 (795)
T 4a2l_A 512 WIGGE-EGLSVFKQEGLDI 529 (795)
T ss_dssp EEEES-SCEEEEEEETTEE
T ss_pred EEEeC-CceEEEeCCCCeE
Confidence 55555 6799999876654
No 277
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.24 E-value=0.13 Score=47.86 Aligned_cols=161 Identities=14% Similarity=0.054 Sum_probs=95.3
Q ss_pred CEEEEEEeeCCCE-EEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeC--CCcEEEEECCCc
Q 048118 83 DVLSVAFSIDNRQ-IVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASW--DRTVKVWNLSNC 159 (303)
Q Consensus 83 ~i~~i~~~~~~~~-l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~--dg~i~iwd~~~~ 159 (303)
.+..|++.+.+.. +++-...+.|.+.++.+.....+... .......|+++|.. ..|....+ .+.|...++...
T Consensus 472 ~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~--~l~~P~gIaVDp~~--g~LYwtD~g~~~~I~~~~~dG~ 547 (791)
T 3m0c_C 472 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE--NGSKPRAIVVDPVH--GFMYWTDWGTPAKIKKGGLNGV 547 (791)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEEC--TTCCEEEEEEETTT--TEEEEEECSSSCEEEEEETTSC
T ss_pred CcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeC--CCCCcceEEEecCC--CCEEEecCCCCCeEEEEecCCC
Confidence 4567888877654 44555667888888876544333221 12336789998864 23444432 367888888654
Q ss_pred eeEEEEcCCCCCeeEEEECCCCCEEEEE-eCCCeEEEEeCCCCceEEEecC---CCeEEEEEEcCCCeEEEEEcCCcEEE
Q 048118 160 KLRATLAGHTGYVNTVAVSPDGSLCASG-GKDGVILLWDLAEGKRLYSLDA---GAVIHALCFSPNRYWLCAATEQSIKI 235 (303)
Q Consensus 160 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~v~iwd~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~~~~~~~i~i 235 (303)
.....+...-.....|++++.+..|..+ ...++|...++........+.. -.....+++..+..+++-...+.|..
T Consensus 548 ~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~~~~I~~ 627 (791)
T 3m0c_C 548 DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFS 627 (791)
T ss_dssp CEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEE
T ss_pred ceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEECCCCEEEE
Confidence 4433333333567899999866666554 4567899999865443222221 12344666654433333345678888
Q ss_pred EeCCCCceeeee
Q 048118 236 WDLESKSIVEDL 247 (303)
Q Consensus 236 wd~~~~~~~~~~ 247 (303)
.|..+++.+..+
T Consensus 628 ~dk~tG~~~~~l 639 (791)
T 3m0c_C 628 ANRLTGSDVNLL 639 (791)
T ss_dssp EETTTCCCCEEE
T ss_pred EeCCCCcceEEe
Confidence 887666544433
No 278
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.22 E-value=0.13 Score=47.71 Aligned_cols=156 Identities=11% Similarity=0.106 Sum_probs=96.8
Q ss_pred CCEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeee-cCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCce
Q 048118 82 KDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQ-EGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCK 160 (303)
Q Consensus 82 ~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~ 160 (303)
..|.++...++|.+.+ |..++-|..++.......... ........|.++...+++ .+-.|+.++-+..++..+++
T Consensus 363 ~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g---~lWigt~~~Gl~~~~~~~~~ 438 (781)
T 3v9f_A 363 KVVSSVCDDGQGKLWI-GTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEG---NLWFGTYLGNISYYNTRLKK 438 (781)
T ss_dssp SCEEEEEECTTSCEEE-EEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTS---CEEEEETTEEEEEECSSSCE
T ss_pred cceEEEEEcCCCCEEE-EeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCC---CEEEEeccCCEEEEcCCCCc
Confidence 4688888877776554 555566888886432211111 011233568888877654 35557776778889887665
Q ss_pred eEEEEc--CCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEec-C-----CCeEEEEEEcCCCeEEEEEcCCc
Q 048118 161 LRATLA--GHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLD-A-----GAVIHALCFSPNRYWLCAATEQS 232 (303)
Q Consensus 161 ~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~-~-----~~~v~~~~~s~~~~~l~~~~~~~ 232 (303)
...... .....|.++...+++.+.+ |+. +.+..+|..+++...... . ...+.++...+++.+.+++.++-
T Consensus 439 ~~~~~~~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G 516 (781)
T 3v9f_A 439 FQIIELEKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG 516 (781)
T ss_dssp EEECCSTTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC
T ss_pred EEEeccCCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCC
Confidence 433211 1345788898888776554 444 568889987654322211 1 35788998888887666666566
Q ss_pred EEEEeCCCCce
Q 048118 233 IKIWDLESKSI 243 (303)
Q Consensus 233 i~iwd~~~~~~ 243 (303)
|..||.++++.
T Consensus 517 l~~~~~~~~~~ 527 (781)
T 3v9f_A 517 VGIYTPDMQLV 527 (781)
T ss_dssp EEEECTTCCEE
T ss_pred EEEEeCCCCeE
Confidence 88899876543
No 279
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.22 E-value=0.053 Score=42.93 Aligned_cols=204 Identities=10% Similarity=0.106 Sum_probs=114.9
Q ss_pred cccCCEEEEEEeeCCCE-EEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECC
Q 048118 79 GHTKDVLSVAFSIDNRQ-IVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLS 157 (303)
Q Consensus 79 ~h~~~i~~i~~~~~~~~-l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~ 157 (303)
+-.+.+-.++++|++.. +++...++.|...|..+.....+... . ......+++.+++ .++++.-.++.+.++++.
T Consensus 24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~-g-~~D~EGIa~~~~g--~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLD-F-VKDLETIEYIGDN--QFVISDERDYAIYVISLT 99 (255)
T ss_dssp TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEECS-S-CSSEEEEEECSTT--EEEEEETTTTEEEEEEEC
T ss_pred CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEecC-C-CCChHHeEEeCCC--EEEEEECCCCcEEEEEcC
Confidence 33457889999997664 44566777777778765433333221 1 1235567777654 344555566788888775
Q ss_pred Cce---eEEEEc------CCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCC---CceEEEec--------CCCeEEEEE
Q 048118 158 NCK---LRATLA------GHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAE---GKRLYSLD--------AGAVIHALC 217 (303)
Q Consensus 158 ~~~---~~~~~~------~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~---~~~~~~~~--------~~~~v~~~~ 217 (303)
... ...... ..+.....++++|.++.|.++.+.....+|.+.. ...+.... .-....+++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 433 122221 1234568999999987776666654445554431 11111110 112357889
Q ss_pred EcCC-CeEEEEE-cCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeE
Q 048118 218 FSPN-RYWLCAA-TEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVI 295 (303)
Q Consensus 218 ~s~~-~~~l~~~-~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v 295 (303)
++|. +.+++.+ ....|..+|.+ ++++..+........ +.......-.++|.|+|.+.++ |+-+.+
T Consensus 180 ~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~-----------l~~~~~qpEGia~d~~G~lyIv-sE~n~~ 246 (255)
T 3qqz_A 180 FNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRG-----------LSHNIKQAEGVAMDASGNIYIV-SEPNRF 246 (255)
T ss_dssp EETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGG-----------CSSCCCSEEEEEECTTCCEEEE-ETTTEE
T ss_pred EcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCC-----------cccccCCCCeeEECCCCCEEEE-cCCceE
Confidence 9997 4555555 46778999976 446655544321110 0001112345889999985555 666666
Q ss_pred EEEe
Q 048118 296 RVWG 299 (303)
Q Consensus 296 ~~w~ 299 (303)
..|.
T Consensus 247 y~f~ 250 (255)
T 3qqz_A 247 YRFT 250 (255)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5553
No 280
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.13 E-value=0.084 Score=43.70 Aligned_cols=148 Identities=14% Similarity=0.164 Sum_probs=90.7
Q ss_pred CCcEEEEecC--CceeeeeecC--C--CCccceEEEEE--cCCCCCCEEEEEeCCCcEEEEECC---C----ceeEEEEc
Q 048118 102 DRTIKLWNTL--GECKYTIQEG--D--AHTEWVSCVRF--SPNTLQPTIVSASWDRTVKVWNLS---N----CKLRATLA 166 (303)
Q Consensus 102 d~~i~vw~~~--~~~~~~~~~~--~--~~~~~i~~~~~--~~~~~~~~~~~~~~dg~i~iwd~~---~----~~~~~~~~ 166 (303)
+++|++|++. ......+... . .....+..+++ +|.....+++....+|.+..|++. + .+.+.++.
T Consensus 98 ~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~ 177 (355)
T 3amr_A 98 KNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK 177 (355)
T ss_dssp CCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE
T ss_pred CCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec
Confidence 5889999663 2222111100 0 01134556777 664433456777888999999882 2 24556665
Q ss_pred CCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCC-----CCceEEEecCC---CeEEEEEEc--CCC--eEEEEE-cCCcE
Q 048118 167 GHTGYVNTVAVSPDGSLCASGGKDGVILLWDLA-----EGKRLYSLDAG---AVIHALCFS--PNR--YWLCAA-TEQSI 233 (303)
Q Consensus 167 ~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~-----~~~~~~~~~~~---~~v~~~~~s--~~~--~~l~~~-~~~~i 233 (303)
-. +.+..+...+....|..+-++.-|..++.+ +++.+..+..+ ..+..+++- +++ .+++++ .+++.
T Consensus 178 lg-sq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~ 256 (355)
T 3amr_A 178 MN-SQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSY 256 (355)
T ss_dssp CS-SCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEE
T ss_pred CC-CCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEE
Confidence 43 467788888888899999888777777754 23455444322 356777773 433 455555 36789
Q ss_pred EEEeCC-CCceeeeeeec
Q 048118 234 KIWDLE-SKSIVEDLKVD 250 (303)
Q Consensus 234 ~iwd~~-~~~~~~~~~~~ 250 (303)
.+||.+ ..+.+..+.+.
T Consensus 257 ~Vydr~~~~~~vg~f~Ig 274 (355)
T 3amr_A 257 AIYDRQGKNKYVADFRIT 274 (355)
T ss_dssp EEEESSTTCCEEEEEEEC
T ss_pred EEEECCCCCcEEEEEEec
Confidence 999996 66677666543
No 281
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.10 E-value=0.12 Score=46.28 Aligned_cols=67 Identities=15% Similarity=0.123 Sum_probs=44.8
Q ss_pred EEEEEeCCCcEEEEECCCceeEEEEcCCC--C--Cee-EEEECCCCCEEEEEeC------CCeEEEEeCCCCceEEEecC
Q 048118 141 TIVSASWDRTVKVWNLSNCKLRATLAGHT--G--YVN-TVAVSPDGSLCASGGK------DGVILLWDLAEGKRLYSLDA 209 (303)
Q Consensus 141 ~~~~~~~dg~i~iwd~~~~~~~~~~~~~~--~--~i~-~~~~~~~~~~l~~~~~------d~~v~iwd~~~~~~~~~~~~ 209 (303)
.++.++.|+.+..+|..+++.+.+..... . .+. ...+. + ..+++++. ++.|..+|.++++.+.++..
T Consensus 117 ~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~-g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 194 (571)
T 2ad6_A 117 QIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA-K-DTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFA 194 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-T-TEEEEECBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred EEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEE-C-CEEEEEecCCccCCCCEEEEEECCCCcEEEEEcc
Confidence 57778889999999999998776554211 0 111 11111 3 35555554 79999999999998877643
No 282
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.09 E-value=0.11 Score=44.22 Aligned_cols=158 Identities=12% Similarity=-0.027 Sum_probs=94.1
Q ss_pred cCCEEEEEEeeCCCEEE-EEeCCCcEEEEecCCce----eeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEE
Q 048118 81 TKDVLSVAFSIDNRQIV-SASRDRTIKLWNTLGEC----KYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWN 155 (303)
Q Consensus 81 ~~~i~~i~~~~~~~~l~-t~~~d~~i~vw~~~~~~----~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd 155 (303)
...+..++|++....|. +-...+.|..++..+.. ...+.. ........+++.+.. ....++-...+.|.+.+
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~--~~~~~p~glavD~~~-~~lY~~d~~~~~I~~~~ 187 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS--RDIQAPDGLAVDWIH-SNIYWTDSVLGTVSVAD 187 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEEC--SSCSCEEEEEEETTT-TEEEEEETTTTEEEEEC
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEe--CCCCCcccEEEEecC-CceEEEECCCCeEEEEe
Confidence 35678899998655544 44456778878765421 111111 122335678887643 23444455678899999
Q ss_pred CCCceeEEEEcCCCCCeeEEEECCCCCEEEEEe--CCCeEEEEeCCCCceEEEecC-CCeEEEEEEcCCCeEEEEE--cC
Q 048118 156 LSNCKLRATLAGHTGYVNTVAVSPDGSLCASGG--KDGVILLWDLAEGKRLYSLDA-GAVIHALCFSPNRYWLCAA--TE 230 (303)
Q Consensus 156 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~d~~v~iwd~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~--~~ 230 (303)
+........+.........++++|.+..|..+. ..+.|...++........+.. -...+.+++++++..|..+ ..
T Consensus 188 ~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~ 267 (400)
T 3p5b_L 188 TKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKL 267 (400)
T ss_dssp TTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCC
Confidence 876554444443345578999999666554443 247888888865443222222 2567889999865444333 35
Q ss_pred CcEEEEeCCCC
Q 048118 231 QSIKIWDLESK 241 (303)
Q Consensus 231 ~~i~iwd~~~~ 241 (303)
+.|+.+|++..
T Consensus 268 ~~I~~~d~dG~ 278 (400)
T 3p5b_L 268 HSISSIDVNGG 278 (400)
T ss_dssp TEEEEEETTSC
T ss_pred CEEEEEeCCCC
Confidence 78999998654
No 283
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.09 E-value=0.096 Score=43.60 Aligned_cols=157 Identities=13% Similarity=-0.000 Sum_probs=93.0
Q ss_pred CCEEEEEEeeCCCEEE-EEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCce
Q 048118 82 KDVLSVAFSIDNRQIV-SASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCK 160 (303)
Q Consensus 82 ~~i~~i~~~~~~~~l~-t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~ 160 (303)
..+..++|++....|. +-...+.|..++..+.....+... .......+++.+.. ....++-...+.|.+.++....
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~--~~~~p~glavd~~~-g~ly~~d~~~~~I~~~~~dG~~ 149 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST--GLESPGGLAVDWVH-DKLYWTDSGTSRIEVANLDGAH 149 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS--SCSCCCEEEEETTT-TEEEEEETTTTEEEEEETTSCS
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeC--CCCCccEEEEecCC-CeEEEEcCCCCeEEEEcCCCCc
Confidence 3467899997655544 444567788888765432222211 11223567777643 2334455556789999986544
Q ss_pred eEEEEcCCCCCeeEEEECCCCCEE-EEEeCC-CeEEEEeCCCCceEEEec-CCCeEEEEEEcCCCe-EEEE-EcCCcEEE
Q 048118 161 LRATLAGHTGYVNTVAVSPDGSLC-ASGGKD-GVILLWDLAEGKRLYSLD-AGAVIHALCFSPNRY-WLCA-ATEQSIKI 235 (303)
Q Consensus 161 ~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~d-~~v~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~-~l~~-~~~~~i~i 235 (303)
....+.........++++|.+..| .+-... +.|...++.......... .-...+.++++|++. +..+ ...+.|..
T Consensus 150 ~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~ 229 (349)
T 3v64_C 150 RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIER 229 (349)
T ss_dssp CEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred eEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEE
Confidence 333333334567889999966554 444444 789888876543322222 234578899998643 3333 34578999
Q ss_pred EeCCCC
Q 048118 236 WDLESK 241 (303)
Q Consensus 236 wd~~~~ 241 (303)
+|+...
T Consensus 230 ~~~dG~ 235 (349)
T 3v64_C 230 ANLDGS 235 (349)
T ss_dssp EETTSC
T ss_pred EeCCCC
Confidence 998653
No 284
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.08 E-value=0.15 Score=45.88 Aligned_cols=66 Identities=15% Similarity=0.205 Sum_probs=44.3
Q ss_pred EEEEeCCCcEEEEECCCceeEEEEcCCC----CCee-EEEECCCCCEEEEEe------CCCeEEEEeCCCCceEEEecC
Q 048118 142 IVSASWDRTVKVWNLSNCKLRATLAGHT----GYVN-TVAVSPDGSLCASGG------KDGVILLWDLAEGKRLYSLDA 209 (303)
Q Consensus 142 ~~~~~~dg~i~iwd~~~~~~~~~~~~~~----~~i~-~~~~~~~~~~l~~~~------~d~~v~iwd~~~~~~~~~~~~ 209 (303)
++.++.|+.+..+|.++++.+.+..... ..++ ...+. ++ .+++++ .++.|+-+|.++++.+.++..
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcC
Confidence 7778889999999999998776543221 0111 11111 34 455554 389999999999999887643
No 285
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.03 E-value=0.13 Score=44.15 Aligned_cols=211 Identities=10% Similarity=0.063 Sum_probs=105.8
Q ss_pred CCEEEEEEeeCCCEEEEEeCC---Cc-EEEEecCCcee--eeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEE
Q 048118 82 KDVLSVAFSIDNRQIVSASRD---RT-IKLWNTLGECK--YTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWN 155 (303)
Q Consensus 82 ~~i~~i~~~~~~~~l~t~~~d---~~-i~vw~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd 155 (303)
..+..++++++|.++++.... .. +...+...... ..... -.....++++|.. ....++-..++.|+.+|
T Consensus 182 ~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~~----~~~P~giavd~~~-G~lyv~d~~~~~V~~~d 256 (433)
T 4hw6_A 182 GQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERLSLCN----ARGAKTCAVHPQN-GKIYYTRYHHAMISSYD 256 (433)
T ss_dssp SCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEEEEEE----CSSBCCCEECTTT-CCEEECBTTCSEEEEEC
T ss_pred CCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeeccccccc----cCCCCEEEEeCCC-CeEEEEECCCCEEEEEE
Confidence 357789999999955544321 11 22222211110 01110 1123457777732 23444444567899999
Q ss_pred CCCceeEEEE-cC-CCCCeeEEEECCCCCEE-EEEeCCCeEEEEeCCC--Cce--EEEe----c------------CCCe
Q 048118 156 LSNCKLRATL-AG-HTGYVNTVAVSPDGSLC-ASGGKDGVILLWDLAE--GKR--LYSL----D------------AGAV 212 (303)
Q Consensus 156 ~~~~~~~~~~-~~-~~~~i~~~~~~~~~~~l-~~~~~d~~v~iwd~~~--~~~--~~~~----~------------~~~~ 212 (303)
..++.....+ .. ....-..++++|+++.| ++-...++|+.++... +.. ...+ . .-..
T Consensus 257 ~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~ 336 (433)
T 4hw6_A 257 PATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWG 336 (433)
T ss_dssp TTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSS
T ss_pred CCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcC
Confidence 8766552222 21 12233569999999855 4555678999988652 211 0111 0 0123
Q ss_pred EEEEEE---------cCCCeEEEEE-cCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEc-C
Q 048118 213 IHALCF---------SPNRYWLCAA-TEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWS-V 281 (303)
Q Consensus 213 v~~~~~---------s~~~~~l~~~-~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-p 281 (303)
...+++ .+++.+.++- ..+.|+.++. .+.+. .+.-... ......... .............+++. +
T Consensus 337 P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v~-t~~G~g~-~~~~G~~dG-~~~~~~~~~~P~giavd~~ 412 (433)
T 4hw6_A 337 PNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRVT-TYAGRGN-SREWGYVDG-ELRSQALFNHPTSIAYDMK 412 (433)
T ss_dssp EEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEEE-EEECCCT-TCSSCCBCE-ETTTTCBCSSEEEEEEETT
T ss_pred CccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCEE-EEEeCCC-CCccccCCC-ccccccEeCCCcEEEEECC
Confidence 566888 6666555443 4577888885 34332 1111000 000000000 00001112235778999 5
Q ss_pred CCCEEEEeecCCeEEEEecc
Q 048118 282 DGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 282 ~~~~l~~gs~Dg~v~~w~~~ 301 (303)
++.++++=...++|+.+++.
T Consensus 413 ~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 413 RKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp TTEEEEEEGGGTEEEEEEEC
T ss_pred CCEEEEEeCCCCEEEEEecC
Confidence 66666666678899888764
No 286
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.00 E-value=0.042 Score=47.97 Aligned_cols=166 Identities=10% Similarity=0.045 Sum_probs=88.0
Q ss_pred eEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEEEcCC---CCCeeEEEE-------CCCCCEEEEEeCCC------
Q 048118 128 VSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGH---TGYVNTVAV-------SPDGSLCASGGKDG------ 191 (303)
Q Consensus 128 i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~---~~~i~~~~~-------~~~~~~l~~~~~d~------ 191 (303)
...++|+|.....++++-...+.|++.|+.++......... ......++| +++++.|+++...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 56789998421234444444567999999887765544332 235788999 99999666665443
Q ss_pred -eEEEEeCCC-CceE-----EEecCCCeEEEEEEcCC-CeEEEEE-cCCcEEEEeCC-------CCceeeeeeecccccc
Q 048118 192 -VILLWDLAE-GKRL-----YSLDAGAVIHALCFSPN-RYWLCAA-TEQSIKIWDLE-------SKSIVEDLKVDLKTEA 255 (303)
Q Consensus 192 -~v~iwd~~~-~~~~-----~~~~~~~~v~~~~~s~~-~~~l~~~-~~~~i~iwd~~-------~~~~~~~~~~~~~~~~ 255 (303)
.|.+.+... ++.. ..+........++++|+ +.++++. .++.|+.+|++ ++.+-....... .
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~-~-- 297 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNN-P-- 297 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGC-T--
T ss_pred ceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccc-c--
Confidence 366665333 1111 11111123345677884 4444433 46778888876 333200000000 0
Q ss_pred ccccCccceeeccccceeEEEEEEcCCCCEE-EEeecCCeEEEEec
Q 048118 256 EKSEATTATTTIKKKNIYCTSLNWSVDGSTL-FSGYTDGVIRVWGI 300 (303)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l-~~gs~Dg~v~~w~~ 300 (303)
. ......... ...+...++|+|+|.+| ++=+..+.|+.++.
T Consensus 298 --g-~~~~l~~~~-~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 298 --N-TFKQLFTIA-DPSWEFQIFIHPTGKYAYFGVINNHYFMRSDY 339 (496)
T ss_dssp --T-TEEEEEECS-SSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred --c-ccceeEecC-CCCCceEEEEcCCCCEEEEEeCCCCEEEEEec
Confidence 0 000000111 11223578999999954 44456778888654
No 287
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.00 E-value=0.11 Score=42.71 Aligned_cols=147 Identities=14% Similarity=0.110 Sum_probs=76.9
Q ss_pred CEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeec-CCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCce-
Q 048118 83 DVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQE-GDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCK- 160 (303)
Q Consensus 83 ~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~- 160 (303)
.+..|.+.+ +..++ ++.++.|..- ..+...+.... .......+..+.+.+++ .++.++.++.|..- ...++
T Consensus 81 ~~~~i~~~~-~~~~~-~g~~g~i~~S-~DgG~tW~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~g~v~~S-~DgG~t 153 (327)
T 2xbg_A 81 RFNSVSFQG-NEGWI-VGEPPIMLHT-TDGGQSWSQIPLDPKLPGSPRLIKALGNG---SAEMITNVGAIYRT-KDSGKN 153 (327)
T ss_dssp EEEEEEEET-TEEEE-EEETTEEEEE-SSTTSSCEECCCCTTCSSCEEEEEEEETT---EEEEEETTCCEEEE-SSTTSS
T ss_pred cEEEEEecC-CeEEE-EECCCeEEEE-CCCCCCceECccccCCCCCeEEEEEECCC---CEEEEeCCccEEEE-cCCCCC
Confidence 466777765 44444 4555644332 22111222111 11122335666665443 34444556655332 12222
Q ss_pred eEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeC--CCCceEEEecCCCeEEEEEEcCCCeEEEEEcCCcEEEEe
Q 048118 161 LRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDL--AEGKRLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWD 237 (303)
Q Consensus 161 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~--~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~i~iwd 237 (303)
...........+..+.+.|++.+++.+...+..+-+|- .+=+.+ .......+..+.+.+++.+++++.+|.+++.+
T Consensus 154 W~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~-~~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~ 231 (327)
T 2xbg_A 154 WQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPH-NRTTSRRLHNMGFTPDGRLWMIVNGGKIAFSD 231 (327)
T ss_dssp EEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEE-ECCSSSCEEEEEECTTSCEEEEETTTEEEEEE
T ss_pred CEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeEC-CCCCCCccceeEECCCCCEEEEeCCceEEEec
Confidence 22223344567889999998888876654444444442 111222 12234567888899988888888888877764
No 288
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.95 E-value=0.074 Score=47.69 Aligned_cols=79 Identities=18% Similarity=0.276 Sum_probs=51.6
Q ss_pred CCcEEEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEecCCCeEEE--EEEcCCCe-E
Q 048118 148 DRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHA--LCFSPNRY-W 224 (303)
Q Consensus 148 dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~--~~~s~~~~-~ 224 (303)
+|.|..||+.+++.+.+..... +...-.+...+.+++.++.|+.++.+|.++++.+.++.....+.+ +.|..++. +
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qY 543 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQY 543 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred cceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEE
Confidence 5789999999998776654332 221111112356777799999999999999999988865433322 44545653 4
Q ss_pred EEE
Q 048118 225 LCA 227 (303)
Q Consensus 225 l~~ 227 (303)
+++
T Consensus 544 v~~ 546 (582)
T 1flg_A 544 LGV 546 (582)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 289
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.90 E-value=0.27 Score=45.65 Aligned_cols=156 Identities=13% Similarity=0.007 Sum_probs=98.4
Q ss_pred cCCEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeee-------cCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEE
Q 048118 81 TKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQ-------EGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKV 153 (303)
Q Consensus 81 ~~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~-------~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~i 153 (303)
...|.++...++|.+- .|..++-|..++.......... ........|.++...+++ .+-.|+.++-|..
T Consensus 312 ~~~v~~i~~D~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g---~lWigt~~~Gl~~ 387 (781)
T 3v9f_A 312 NASARYIFQDSFNNIW-IGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQG---KLWIGTDGGGINV 387 (781)
T ss_dssp SSCEEEEEECSSCCEE-EEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTS---CEEEEEBSSCEEE
T ss_pred CCeEEEEEEeCCCCEE-EEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCC---CEEEEeCCCcEEE
Confidence 4568888888887654 4666666888876432211111 111123468888887654 3556676677888
Q ss_pred EECCCceeEEEE---cCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEec----CCCeEEEEEEcCCCeEEE
Q 048118 154 WNLSNCKLRATL---AGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLD----AGAVIHALCFSPNRYWLC 226 (303)
Q Consensus 154 wd~~~~~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~ 226 (303)
||..+++..... ......|.++...+++.+.+ |+.++.+..+|..+++.. .+. ....|.++...+++.+.+
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~v~~i~~d~~g~lwi 465 (781)
T 3v9f_A 388 FENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQ-IIELEKNELLDVRVFYEDKNKKIWI 465 (781)
T ss_dssp EETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEE-ECCSTTTCCCCEEEEEECTTSEEEE
T ss_pred EECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEE-EeccCCCCCCeEEEEEECCCCCEEE
Confidence 987654332110 11235788998888877655 666677888998766432 222 235788888888887655
Q ss_pred EEcCCcEEEEeCCCCce
Q 048118 227 AATEQSIKIWDLESKSI 243 (303)
Q Consensus 227 ~~~~~~i~iwd~~~~~~ 243 (303)
++. +.|..||.++++.
T Consensus 466 gt~-~Gl~~~~~~~~~~ 481 (781)
T 3v9f_A 466 GTH-AGVFVIDLASKKV 481 (781)
T ss_dssp EET-TEEEEEESSSSSC
T ss_pred EEC-CceEEEeCCCCeE
Confidence 555 6799999876654
No 290
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.87 E-value=0.17 Score=45.78 Aligned_cols=159 Identities=10% Similarity=0.024 Sum_probs=88.6
Q ss_pred CCEEEEEEeeCCCE-EEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeC--CCcEEEEECCC
Q 048118 82 KDVLSVAFSIDNRQ-IVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASW--DRTVKVWNLSN 158 (303)
Q Consensus 82 ~~i~~i~~~~~~~~-l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~--dg~i~iwd~~~ 158 (303)
..+..+++.+.+.. ..+-...+.|.+.+..+.....+... .-.....++++|.. ..+....+ .+.|...++..
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~--~l~~P~~Iavdp~~--g~ly~tD~g~~~~I~r~~~dG 159 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQ--ELDQPRAIALDPSS--GFMYWTDWGEVPKIERAGMDG 159 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS--SCSCCCCEEEETTT--TEEEEEECSSSCEEEEEETTS
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeC--CCCCCceEEEecCC--CeEEEeccCCCCEEEEEECCC
Confidence 35778999986554 44445668899988876533333211 12234578888864 23444343 45677777654
Q ss_pred ceeEEEEcCCCCCeeEEEECCCCCEEEEE-eCCCeEEEEeCCCCceEEEec-CCCeEEEEEEcCCCeEEEEEcCCcEEEE
Q 048118 159 CKLRATLAGHTGYVNTVAVSPDGSLCASG-GKDGVILLWDLAEGKRLYSLD-AGAVIHALCFSPNRYWLCAATEQSIKIW 236 (303)
Q Consensus 159 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~i~iw 236 (303)
..........-.....+++++++..|..+ +..++|...|+.......... .......+++.++..+.+-...+.|...
T Consensus 160 ~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~~ly~td~~~~~V~~~ 239 (619)
T 3s94_A 160 SSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILAC 239 (619)
T ss_dssp CSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSSEEEEECTTTCSEEEE
T ss_pred CceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCCEEEEecCCCCEEEEE
Confidence 33333232333456889999876655444 456789999886543221111 1112234566555333333346788888
Q ss_pred eCCCCcee
Q 048118 237 DLESKSIV 244 (303)
Q Consensus 237 d~~~~~~~ 244 (303)
|..+++..
T Consensus 240 d~~tg~~~ 247 (619)
T 3s94_A 240 NKYTGEGL 247 (619)
T ss_dssp ESSSCCCC
T ss_pred ECCCCccc
Confidence 88766543
No 291
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.87 E-value=0.16 Score=42.38 Aligned_cols=153 Identities=11% Similarity=0.081 Sum_probs=83.0
Q ss_pred EEEEeeCCCEEEEEe------------CCCcEEEEecCCc--eee--eeec--CCCCccceEEEEEcCC--CCCCEEEEE
Q 048118 86 SVAFSIDNRQIVSAS------------RDRTIKLWNTLGE--CKY--TIQE--GDAHTEWVSCVRFSPN--TLQPTIVSA 145 (303)
Q Consensus 86 ~i~~~~~~~~l~t~~------------~d~~i~vw~~~~~--~~~--~~~~--~~~~~~~i~~~~~~~~--~~~~~~~~~ 145 (303)
.+...++|..+++++ .+|.|.++|..+. ... .+.. .+........+.+.++ +....+++-
T Consensus 54 Di~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvn 133 (355)
T 3sre_A 54 DLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVN 133 (355)
T ss_dssp EEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEE
T ss_pred eeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEE
Confidence 455677765555542 6888999997532 111 1111 1112223556666553 211123332
Q ss_pred e--CCCcEEEEECCCc--e--eEEEEcCC-CCCeeEEEECCCCCEEEEEe-----------------CCCeEEEEeCCCC
Q 048118 146 S--WDRTVKVWNLSNC--K--LRATLAGH-TGYVNTVAVSPDGSLCASGG-----------------KDGVILLWDLAEG 201 (303)
Q Consensus 146 ~--~dg~i~iwd~~~~--~--~~~~~~~~-~~~i~~~~~~~~~~~l~~~~-----------------~d~~v~iwd~~~~ 201 (303)
- .+..|.+|++... . ....+.+. -...+.+.+.++|.+.++.. ..|.|.-+|..
T Consensus 134 h~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~-- 211 (355)
T 3sre_A 134 HPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN-- 211 (355)
T ss_dssp CSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--
T ss_pred CCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--
Confidence 2 2567778776432 2 23344432 24578899999998777653 12455555542
Q ss_pred ceEEEecCCCeEEEEEEcCCCeEEEEE--cCCcEEEEeCCC
Q 048118 202 KRLYSLDAGAVIHALCFSPNRYWLCAA--TEQSIKIWDLES 240 (303)
Q Consensus 202 ~~~~~~~~~~~v~~~~~s~~~~~l~~~--~~~~i~iwd~~~ 240 (303)
+.......-...+.++|+||+..+.++ ..+.|+.|+++.
T Consensus 212 ~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 212 DVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp CCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred eEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 211111222456789999998554443 468899999864
No 292
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.86 E-value=0.15 Score=46.42 Aligned_cols=116 Identities=11% Similarity=0.104 Sum_probs=68.3
Q ss_pred EEEEee-CCCEEEEEeCCC-----------cEEEEecCCceeeeeecC-CCCccceEEEEEcCCCCCCEEEEEe-CCCcE
Q 048118 86 SVAFSI-DNRQIVSASRDR-----------TIKLWNTLGECKYTIQEG-DAHTEWVSCVRFSPNTLQPTIVSAS-WDRTV 151 (303)
Q Consensus 86 ~i~~~~-~~~~l~t~~~d~-----------~i~vw~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~-~dg~i 151 (303)
.+++.+ ++++++.|+.+. .+.+||............ ..+.....++++.+++ ..++.|+ .+..+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g--~lyv~GG~~~~~v 267 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNG--QIVVTGGNDAKKT 267 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTS--CEEEECSSSTTCE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCC--CEEEeCCCCCCce
Confidence 556677 788888887643 477888765432221111 1111222235555654 3566666 45689
Q ss_pred EEEECCCceeEEEEcCCCCC-eeEEEECCCCCEEEEEe-CC-----CeEEEEeCCCCce
Q 048118 152 KVWNLSNCKLRATLAGHTGY-VNTVAVSPDGSLCASGG-KD-----GVILLWDLAEGKR 203 (303)
Q Consensus 152 ~iwd~~~~~~~~~~~~~~~~-i~~~~~~~~~~~l~~~~-~d-----~~v~iwd~~~~~~ 203 (303)
.+||..+++....-.-+... -.++...++++.++.|+ .+ ..+.+||..+.+-
T Consensus 268 ~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W 326 (656)
T 1k3i_A 268 SLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTW 326 (656)
T ss_dssp EEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEE
T ss_pred EEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcc
Confidence 99999876544321112222 23456667899999998 34 4689999887653
No 293
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.84 E-value=0.13 Score=44.98 Aligned_cols=153 Identities=14% Similarity=0.139 Sum_probs=89.1
Q ss_pred CEEEEEEeeC-CC-EEEEEeCCCcEEEEecCCceeeeeecC-CCCccceEEEEE-------cCCCCCCEEEEEeCCC---
Q 048118 83 DVLSVAFSID-NR-QIVSASRDRTIKLWNTLGECKYTIQEG-DAHTEWVSCVRF-------SPNTLQPTIVSASWDR--- 149 (303)
Q Consensus 83 ~i~~i~~~~~-~~-~l~t~~~d~~i~vw~~~~~~~~~~~~~-~~~~~~i~~~~~-------~~~~~~~~~~~~~~dg--- 149 (303)
....|+|+|. +. ++++....+.|++.|........+... .........++| ++++. .++.+...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~--~lyvad~~~~~~ 217 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAE--YMIVAIDYDGKG 217 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTC--EEEEEECCCTTG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCC--EEEEEeCCCCCc
Confidence 4678999983 44 444444446788888766444433221 112234788999 88762 344444443
Q ss_pred ----cEEEEECCC-ceeE-----EEEcCCCCCeeEEEECCC-CCEEEEEeCCCeEEEEeCC-------CCce--------
Q 048118 150 ----TVKVWNLSN-CKLR-----ATLAGHTGYVNTVAVSPD-GSLCASGGKDGVILLWDLA-------EGKR-------- 203 (303)
Q Consensus 150 ----~i~iwd~~~-~~~~-----~~~~~~~~~i~~~~~~~~-~~~l~~~~~d~~v~iwd~~-------~~~~-------- 203 (303)
.|.+++... +... ..+... .....++++|+ +.++++-..++.|..+|+. ++..
T Consensus 218 ~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~ 296 (496)
T 3kya_A 218 DESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNN 296 (496)
T ss_dssp GGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGC
T ss_pred ccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccc
Confidence 255665333 1221 122211 23457889994 5555666678899999987 4432
Q ss_pred ------EEEecCCCeEEEEEEcCCCeEEEE--EcCCcEEEEeC
Q 048118 204 ------LYSLDAGAVIHALCFSPNRYWLCA--ATEQSIKIWDL 238 (303)
Q Consensus 204 ------~~~~~~~~~v~~~~~s~~~~~l~~--~~~~~i~iwd~ 238 (303)
+.........+.++|+|++..|.. ...+.|+.++.
T Consensus 297 ~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 297 PNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDY 339 (496)
T ss_dssp TTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred ccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEec
Confidence 223333345678999999874333 34678888654
No 294
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.83 E-value=0.15 Score=41.77 Aligned_cols=153 Identities=10% Similarity=0.115 Sum_probs=96.5
Q ss_pred EEEEEeeCCCEEEEEe-CCCcEEEEecCCceeeeeecCC----C-CccceEEEEE---cCCCCCCEEEEEe---------
Q 048118 85 LSVAFSIDNRQIVSAS-RDRTIKLWNTLGECKYTIQEGD----A-HTEWVSCVRF---SPNTLQPTIVSAS--------- 146 (303)
Q Consensus 85 ~~i~~~~~~~~l~t~~-~d~~i~vw~~~~~~~~~~~~~~----~-~~~~i~~~~~---~~~~~~~~~~~~~--------- 146 (303)
.+++|++....|..++ ..+.|..|+..+.....+.... . ....+..+.+ .|++ .++++..
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~g--rL~vv~~~~~af~~~g 93 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSK--RLFAVMKNAKSFNFAD 93 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCC--EEEEEEEETTTTCTTS
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCC--cEEEEEcccccccccc
Confidence 3688988766766666 6899999998643222221111 0 1123578889 5653 2444333
Q ss_pred ----CCCcEEEEECC---CceeEEEEc--C-----------CCCCeeEEEECCCCCEEEEEeCC-CeEEEEeCCCCceEE
Q 048118 147 ----WDRTVKVWNLS---NCKLRATLA--G-----------HTGYVNTVAVSPDGSLCASGGKD-GVILLWDLAEGKRLY 205 (303)
Q Consensus 147 ----~dg~i~iwd~~---~~~~~~~~~--~-----------~~~~i~~~~~~~~~~~l~~~~~d-~~v~iwd~~~~~~~~ 205 (303)
.+..+..||+. +++...... . -......++..++|+..++++.- +.|...+.... .+.
T Consensus 94 ~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~~~ 172 (334)
T 2p9w_A 94 QSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK-TVS 172 (334)
T ss_dssp CCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC-CEE
T ss_pred cccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-EEe
Confidence 25779999998 666544332 1 11247899999999999988888 88877776543 222
Q ss_pred Ee--cC-----CCeEEEEEEcCCCeEE-EEEcCCcEEEEeCCC
Q 048118 206 SL--DA-----GAVIHALCFSPNRYWL-CAATEQSIKIWDLES 240 (303)
Q Consensus 206 ~~--~~-----~~~v~~~~~s~~~~~l-~~~~~~~i~iwd~~~ 240 (303)
.+ .. ..-.+.++++|++..| +..+.++|..+|++.
T Consensus 173 ~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 173 TFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp EEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred eeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 22 11 1124578999998544 444588999999874
No 295
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.80 E-value=0.16 Score=41.71 Aligned_cols=189 Identities=11% Similarity=0.028 Sum_probs=99.3
Q ss_pred CCEEEEEEeeCCCEEEEEeCCCcE-EEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEE-EEC--C
Q 048118 82 KDVLSVAFSIDNRQIVSASRDRTI-KLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKV-WNL--S 157 (303)
Q Consensus 82 ~~i~~i~~~~~~~~l~t~~~d~~i-~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~i-wd~--~ 157 (303)
+.+..+.+.+++..++.+ .++.| +-.|- +....... ......+..+.+.|++ ..++ .+.+|.+.. .|- .
T Consensus 122 ~~~~~i~~~~~~~~~~~~-~~g~v~~S~Dg-G~tW~~~~--~~~~~~~~~~~~~~~~--~~~~-~g~~G~~~~S~d~gG~ 194 (327)
T 2xbg_A 122 GSPRLIKALGNGSAEMIT-NVGAIYRTKDS-GKNWQALV--QEAIGVMRNLNRSPSG--EYVA-VSSRGSFYSTWEPGQT 194 (327)
T ss_dssp SCEEEEEEEETTEEEEEE-TTCCEEEESST-TSSEEEEE--CSCCCCEEEEEECTTS--CEEE-EETTSSEEEEECTTCS
T ss_pred CCeEEEEEECCCCEEEEe-CCccEEEEcCC-CCCCEEee--cCCCcceEEEEEcCCC--cEEE-EECCCcEEEEeCCCCC
Confidence 346677777777666655 45543 22231 22221221 1233457888898864 3444 445555544 342 2
Q ss_pred CceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEec-----CCCeEEEEEEcCCCeEEEEEcCCc
Q 048118 158 NCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLD-----AGAVIHALCFSPNRYWLCAATEQS 232 (303)
Q Consensus 158 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~-----~~~~v~~~~~s~~~~~l~~~~~~~ 232 (303)
+.+.. -......+..+.+.++++.++ ++.+|.+.+.+...++.-..+. ....+.++++.+++.+++++.++.
T Consensus 195 tW~~~--~~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~ 271 (327)
T 2xbg_A 195 AWEPH--NRTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGA 271 (327)
T ss_dssp SCEEE--ECCSSSCEEEEEECTTSCEEE-EETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTC
T ss_pred ceeEC--CCCCCCccceeEECCCCCEEE-EeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCCe
Confidence 22222 123446788899999887664 4467888776422233221121 123578899998888888888887
Q ss_pred EEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEe
Q 048118 233 IKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWG 299 (303)
Q Consensus 233 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~ 299 (303)
|+ +..+.++.-..+... ......+.++.|.+++ .+++++.+|.|.-++
T Consensus 272 i~-~S~DgG~tW~~~~~~-----------------~~~~~~~~~v~~~~~~-~~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 272 LL-CSQDGGQTWQQDVDV-----------------KKVPSNFYKILFFSPD-QGFILGQKGILLRYV 319 (327)
T ss_dssp EE-EESSTTSSCEECGGG-----------------TTSSSCCCEEEEEETT-EEEEECSTTEEEEEC
T ss_pred EE-EeCCCCcccEEcCcc-----------------CCCCCCeEEEEEECCC-ceEEEcCCceEEEEc
Confidence 74 333333221111100 0000112346666544 466667789887664
No 296
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.64 E-value=0.43 Score=44.39 Aligned_cols=159 Identities=11% Similarity=-0.041 Sum_probs=93.6
Q ss_pred cCCEEEEEEeeCCCE-EEEEeCCCcEEEEecCCce----eeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEE
Q 048118 81 TKDVLSVAFSIDNRQ-IVSASRDRTIKLWNTLGEC----KYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWN 155 (303)
Q Consensus 81 ~~~i~~i~~~~~~~~-l~t~~~d~~i~vw~~~~~~----~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd 155 (303)
...+..++|++.... +.+-...+.|..+++.+.. ...+.. ........|++.+.+ ..+.++-...+.|.+.+
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~--~~l~~P~GLAvD~~~-~~LY~tD~~~~~I~v~~ 499 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS--RDIQAPDGLAVDWIH-SNIYWTDSVLGTVSVAD 499 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC--SSCSCCCEEEEETTT-TEEEEEETTTTEEEEEE
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEe--cCCCCcceeeeeecC-CcEEEEecCCCeEEEEe
Confidence 345678999985544 4454556778777765421 111111 112234567777654 23445556678899999
Q ss_pred CCCceeEEEEcCCCCCeeEEEECCCCCEEEEEe-C-CCeEEEEeCCCCceEEEecC-CCeEEEEEEcCCCeEEEEE--cC
Q 048118 156 LSNCKLRATLAGHTGYVNTVAVSPDGSLCASGG-K-DGVILLWDLAEGKRLYSLDA-GAVIHALCFSPNRYWLCAA--TE 230 (303)
Q Consensus 156 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~-d~~v~iwd~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~--~~ 230 (303)
+........+.........|+++|.+..|..+. . .++|.+.++........+.. -.....|++++.+..|..+ ..
T Consensus 500 ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~ 579 (791)
T 3m0c_C 500 TKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKL 579 (791)
T ss_dssp TTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCC
Confidence 875544333333445678999999765554443 2 37899998875544333332 2467889999764333333 35
Q ss_pred CcEEEEeCCCCc
Q 048118 231 QSIKIWDLESKS 242 (303)
Q Consensus 231 ~~i~iwd~~~~~ 242 (303)
+.|..+++....
T Consensus 580 ~~I~~~d~dG~~ 591 (791)
T 3m0c_C 580 HSISSIDVNGGN 591 (791)
T ss_dssp TEEEEEETTSCS
T ss_pred CcEEEEecCCCc
Confidence 679999986543
No 297
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.64 E-value=0.21 Score=40.80 Aligned_cols=156 Identities=12% Similarity=-0.020 Sum_probs=90.6
Q ss_pred CCEEEEEEeeCCCE-EEEEeCCCcEEEEecCC----ceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEEC
Q 048118 82 KDVLSVAFSIDNRQ-IVSASRDRTIKLWNTLG----ECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNL 156 (303)
Q Consensus 82 ~~i~~i~~~~~~~~-l~t~~~d~~i~vw~~~~----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~ 156 (303)
..+..++|++.+.. +.+-...+.|..++..+ .....+.. ........+++++.. ....++-...+.|.++++
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~--~~~~~p~glavd~~~-~~ly~~d~~~~~I~~~~~ 106 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS--RDIQAPDGLAVDWIH-SNIYWTDSVLGTVSVADT 106 (316)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC--SSCSCCCEEEEETTT-TEEEEEETTTTEEEEEET
T ss_pred CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEe--CCCCCcCEEEEeecC-CeEEEEECCCCEEEEEeC
Confidence 45678999986554 44545567888888754 11111111 111224567777643 223444456788999998
Q ss_pred CCceeEEEEcCCCCCeeEEEECCCCCEEEEEe-CC-CeEEEEeCCCCceEEEe-cCCCeEEEEEEcCCCeEE-EE-EcCC
Q 048118 157 SNCKLRATLAGHTGYVNTVAVSPDGSLCASGG-KD-GVILLWDLAEGKRLYSL-DAGAVIHALCFSPNRYWL-CA-ATEQ 231 (303)
Q Consensus 157 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d-~~v~iwd~~~~~~~~~~-~~~~~v~~~~~s~~~~~l-~~-~~~~ 231 (303)
........+.........++++|.+..|..+. .. +.|...++......... ..-...+.+++++++..| .+ +..+
T Consensus 107 ~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~ 186 (316)
T 1ijq_A 107 KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH 186 (316)
T ss_dssp TSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred CCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCC
Confidence 65443333333335678999999666554443 33 78888887543322111 223467789999865433 33 3457
Q ss_pred cEEEEeCCC
Q 048118 232 SIKIWDLES 240 (303)
Q Consensus 232 ~i~iwd~~~ 240 (303)
.|..+|++.
T Consensus 187 ~I~~~d~dg 195 (316)
T 1ijq_A 187 SISSIDVNG 195 (316)
T ss_dssp EEEEEETTS
T ss_pred eEEEEecCC
Confidence 899999874
No 298
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.36 E-value=0.034 Score=51.04 Aligned_cols=155 Identities=11% Similarity=-0.032 Sum_probs=84.6
Q ss_pred CEEEEEEeeCCCEEEEE-eCCCcEEEEecCC----ceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECC
Q 048118 83 DVLSVAFSIDNRQIVSA-SRDRTIKLWNTLG----ECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLS 157 (303)
Q Consensus 83 ~i~~i~~~~~~~~l~t~-~~d~~i~vw~~~~----~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~ 157 (303)
.+..++|++.+..|+.. ...+.|..+++.+ .....+. .........+++.+... .++++-...+.|.++++.
T Consensus 407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i--~~~~~~P~glavD~~~g-~LY~tD~~~~~I~v~d~d 483 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI--SRDIQAPDGLAVDWIHS-NIYWTDSVLGTVSVADTK 483 (699)
T ss_dssp TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBC--CSCC--CCCEECCCSSS-BCEECCTTTSCEEEEBSS
T ss_pred ceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEE--eCCCCCcceEEEEeeCC-cEEEEeccCCeEEEEecC
Confidence 45678888866655544 4457788887754 1111111 01111234566665432 234444456789999986
Q ss_pred CceeEEEEcCCCCCeeEEEECCCCCEEEEEe-C-CCeEEEEeCCCCceEEEe-cCCCeEEEEEEcCCCe-EE-EEEcCCc
Q 048118 158 NCKLRATLAGHTGYVNTVAVSPDGSLCASGG-K-DGVILLWDLAEGKRLYSL-DAGAVIHALCFSPNRY-WL-CAATEQS 232 (303)
Q Consensus 158 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~-d~~v~iwd~~~~~~~~~~-~~~~~v~~~~~s~~~~-~l-~~~~~~~ 232 (303)
.......+.........++++|.+..|..+. . .++|.+.++........+ ..-...+.++|+|++. ++ +-+..+.
T Consensus 484 g~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~ 563 (699)
T 1n7d_A 484 GVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 563 (699)
T ss_dssp SCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTE
T ss_pred CCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCe
Confidence 5544333332234557889999655444433 2 378888877543221111 1123456789998743 33 3334678
Q ss_pred EEEEeCCC
Q 048118 233 IKIWDLES 240 (303)
Q Consensus 233 i~iwd~~~ 240 (303)
|..+++..
T Consensus 564 I~~~d~dG 571 (699)
T 1n7d_A 564 ISSIDVNG 571 (699)
T ss_dssp EEEECSSS
T ss_pred EEEEccCC
Confidence 99999864
No 299
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.33 E-value=0.34 Score=39.64 Aligned_cols=155 Identities=12% Similarity=-0.001 Sum_probs=90.4
Q ss_pred CEEEEEEeeCCC-EEEEEeCCCcEEEEecCCcee-eeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCce
Q 048118 83 DVLSVAFSIDNR-QIVSASRDRTIKLWNTLGECK-YTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCK 160 (303)
Q Consensus 83 ~i~~i~~~~~~~-~l~t~~~d~~i~vw~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~ 160 (303)
.+..++|++... ++.+-...+.|..++..+... ..+... .......+++.+.. ....++-...+.|.++++....
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~--~l~~p~glavd~~~-g~ly~~d~~~~~I~~~~~dG~~ 112 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVS--GLLSPDGLACDWLG-EKLYWTDSETNRIEVSNLDGSL 112 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEE--CCSCCCEEEEETTT-TEEEEEETTTTEEEEEETTSCS
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcC--CCCCccEEEEEcCC-CeEEEEECCCCEEEEEECCCCc
Confidence 456789998544 445555667788888754321 111110 11124467777643 2234444556789999986543
Q ss_pred eEEEEcCCCCCeeEEEECCCCCEEEEEe--CCCeEEEEeCCCCceEEEec-CCCeEEEEEEcCCC-eEEEE-EcCCcEEE
Q 048118 161 LRATLAGHTGYVNTVAVSPDGSLCASGG--KDGVILLWDLAEGKRLYSLD-AGAVIHALCFSPNR-YWLCA-ATEQSIKI 235 (303)
Q Consensus 161 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~-~~l~~-~~~~~i~i 235 (303)
....+.........+++.|.+..|..+. ..+.|...++.......... .-...+.+++++++ .+..+ +..+.|+.
T Consensus 113 ~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~ 192 (318)
T 3sov_A 113 RKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHK 192 (318)
T ss_dssp CEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEE
Confidence 3333333345678899998766555444 35788888876433222222 22456789999864 33333 34678999
Q ss_pred EeCCC
Q 048118 236 WDLES 240 (303)
Q Consensus 236 wd~~~ 240 (303)
+|+..
T Consensus 193 ~d~dG 197 (318)
T 3sov_A 193 SNLDG 197 (318)
T ss_dssp EETTS
T ss_pred EcCCC
Confidence 99864
No 300
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.21 E-value=0.67 Score=41.89 Aligned_cols=198 Identities=10% Similarity=0.030 Sum_probs=112.5
Q ss_pred ceeeeecCCCCCcEEEEecCCCcEEEEEcccCccccceeeeeecCCCcceEEEEeCCCCceecccCCEEEEEEeeCCCEE
Q 048118 17 MVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFVGHTKDVLSVAFSIDNRQI 96 (303)
Q Consensus 17 ~v~~v~~~~~~~~~~~t~s~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~h~~~i~~i~~~~~~~~l 96 (303)
.+..|+|++.+..++.+-..++.|..+++...... .+ +.. -...+..+++.+.+..|
T Consensus 38 ~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~----------------~v-~~~------g~~~P~GlAvD~~~~~L 94 (628)
T 4a0p_A 38 EASALDFDVTDNRIYWTDISLKTISRAFMNGSALE----------------HV-VEF------GLDYPEGMAVDWLGKNL 94 (628)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE----------------EE-ECS------SCSCCCEEEEETTTTEE
T ss_pred ceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcE----------------EE-EeC------CCCCcceEEEEeCCCEE
Confidence 35577888766666666666777777766422110 00 000 01234578888665544
Q ss_pred -EEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeC--CCcEEEEECCCceeEEEEcCCCCCee
Q 048118 97 -VSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASW--DRTVKVWNLSNCKLRATLAGHTGYVN 173 (303)
Q Consensus 97 -~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~i~ 173 (303)
.+-...+.|.+.++.+.....+... .-.....++++|.. ..+....+ .+.|...++....... +...-....
T Consensus 95 Y~tD~~~~~I~v~~~dG~~~~~l~~~--~l~~P~~iavdp~~--G~lY~tD~g~~~~I~r~~~dG~~~~~-l~~~~~~P~ 169 (628)
T 4a0p_A 95 YWADTGTNRIEVSKLDGQHRQVLVWK--DLDSPRALALDPAE--GFMYWTEWGGKPKIDRAAMDGSERTT-LVPNVGRAN 169 (628)
T ss_dssp EEEETTTTEEEEEETTSTTCEEEECS--SCCCEEEEEEETTT--TEEEEEECSSSCEEEEEETTSCSCEE-EECSCSSEE
T ss_pred EEEECCCCEEEEEecCCCcEEEEEeC--CCCCcccEEEccCC--CeEEEeCCCCCCEEEEEeCCCCceEE-EECCCCCcc
Confidence 4444567788888765433222211 22345789999854 24444442 5678778876544332 223345678
Q ss_pred EEEECCCCCEEEEE-eCCCeEEEEeCCCCceEEEecCCCeEEEEEEcCCCeEEEEEcCCcEEEEeCCCCc
Q 048118 174 TVAVSPDGSLCASG-GKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKS 242 (303)
Q Consensus 174 ~~~~~~~~~~l~~~-~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~ 242 (303)
.++++++++.|..+ ...+.|...|+.................+++..+..+.+-...+.|...|..+++
T Consensus 170 GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~~l~~P~glav~~~~ly~tD~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 170 GLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIADDLPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQ 239 (628)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECCSCEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred eEEEccccCEEEEEECCCCEEEEEcCCCCceEEeeccCCCceEEEEECCEEEEecCCCCEEEEEECCCCC
Confidence 89999976666554 4578999999875433211122233456777654333333346788888876554
No 301
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.65 E-value=0.2 Score=42.59 Aligned_cols=115 Identities=10% Similarity=0.086 Sum_probs=68.6
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceEE--Eec---CCCeEEEEEEcCCCeEEEEEcCCcEEEEeCCCCceeee-eeecccc
Q 048118 180 DGSLCASGGKDGVILLWDLAEGKRLY--SLD---AGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVED-LKVDLKT 253 (303)
Q Consensus 180 ~~~~l~~~~~d~~v~iwd~~~~~~~~--~~~---~~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~-~~~~~~~ 253 (303)
+|..++.+ .++.||..++..+..-+ ..+ ....+..+..||+|.+||..++..|.+-.+-.+..... ....
T Consensus 31 n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~--- 106 (452)
T 3pbp_A 31 NGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQ--- 106 (452)
T ss_dssp TTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHH---
T ss_pred CCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccc---
Confidence 44444433 24678877776433222 222 12256779999999999999999999998863321110 0000
Q ss_pred ccccccCccceeecc----ccceeEEEEEEcCC---CCEEEEeecCCeEEEEeccc
Q 048118 254 EAEKSEATTATTTIK----KKNIYCTSLNWSVD---GSTLFSGYTDGVIRVWGIGR 302 (303)
Q Consensus 254 ~~~~~~~~~~~~~~~----~~~~~~~~~~~sp~---~~~l~~gs~Dg~v~~w~~~~ 302 (303)
.........+. .....+..+.|+|- +..|++=..|+.||+||+.+
T Consensus 107 ----~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 107 ----DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp ----HTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred ----cccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEccc
Confidence 00000001111 01345778999995 45899999999999999974
No 302
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.59 E-value=0.079 Score=40.75 Aligned_cols=107 Identities=14% Similarity=0.057 Sum_probs=61.6
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEecCCCeE--------EEEEEcCCCeEEEEEcCCcEEEEeCCCCc
Q 048118 171 YVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVI--------HALCFSPNRYWLCAATEQSIKIWDLESKS 242 (303)
Q Consensus 171 ~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~v--------~~~~~s~~~~~l~~~~~~~i~iwd~~~~~ 242 (303)
.+..++|+|+|.+.++ .+|.+.-.+..+.+...-+.....| ..+.|.|++.+.++ +||.|+-++--+..
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav-~dG~iyr~~pP~~~ 118 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV-SKDKLYKASPPQSD 118 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE-ETTEEEEESCCCST
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe-CCCEEEEeCCCcCC
Confidence 5779999999987776 6787776665442210000111223 67889999988877 77999877742110
Q ss_pred eeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeE
Q 048118 243 IVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVI 295 (303)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v 295 (303)
-- ... .. ........-..+..|.+.|+|.+.++. ||.+
T Consensus 119 ~~-----~Wl-----~~---a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~l 156 (236)
T 1tl2_A 119 TD-----NWI-----AR---ATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQF 156 (236)
T ss_dssp TC-----CHH-----HH---SEEEECSSGGGEEEEEECTTSCEEEEE--TTEE
T ss_pred CC-----cee-----cc---ccEeccCCCCceEEEEECCCceEEEEe--CCcE
Confidence 00 000 00 000001111223678899999988877 7765
No 303
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.58 E-value=0.84 Score=37.97 Aligned_cols=132 Identities=10% Similarity=0.155 Sum_probs=72.8
Q ss_pred CCCcEEEEECCCc--ee-EEEEcC-----CCCCeeEEEECC--CCC--EEEEEeC--CCeEEEEeCCCCc----eEEEec
Q 048118 147 WDRTVKVWNLSNC--KL-RATLAG-----HTGYVNTVAVSP--DGS--LCASGGK--DGVILLWDLAEGK----RLYSLD 208 (303)
Q Consensus 147 ~dg~i~iwd~~~~--~~-~~~~~~-----~~~~i~~~~~~~--~~~--~l~~~~~--d~~v~iwd~~~~~----~~~~~~ 208 (303)
.+|.|.++|.++. +. .-.+.+ ..-....+.+.+ ++. ++++-.. +.++.+|++.... .+.++.
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 6889999998732 22 112222 122456666644 453 3444333 5688888775432 122333
Q ss_pred C--CCeEEEEEEcCCCeEEEEEc----C--------------CcEEEEeCCCCceeeeeeeccccccccccCccceeecc
Q 048118 209 A--GAVIHALCFSPNRYWLCAAT----E--------------QSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIK 268 (303)
Q Consensus 209 ~--~~~v~~~~~s~~~~~l~~~~----~--------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (303)
. -...+.+.+.++|.+.++.. + +.|+.+|.. + +.. +.
T Consensus 161 g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~-~~~--------------------~~ 217 (355)
T 3sre_A 161 HKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--D-VRV--------------------VA 217 (355)
T ss_dssp CTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--C-CEE--------------------EE
T ss_pred cCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--e-EEE--------------------ee
Confidence 2 24678888888887655532 1 234444431 1 000 01
Q ss_pred ccceeEEEEEEcCCCCEEEEe-ecCCeEEEEecc
Q 048118 269 KKNIYCTSLNWSVDGSTLFSG-YTDGVIRVWGIG 301 (303)
Q Consensus 269 ~~~~~~~~~~~sp~~~~l~~g-s~Dg~v~~w~~~ 301 (303)
......+.++||||+++|.++ +..+.|..|++.
T Consensus 218 ~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~ 251 (355)
T 3sre_A 218 EGFDFANGINISPDGKYVYIAELLAHKIHVYEKH 251 (355)
T ss_dssp EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred cCCcccCcceECCCCCEEEEEeCCCCeEEEEEEC
Confidence 112235789999999876655 467899999874
No 304
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=95.54 E-value=1.3 Score=39.98 Aligned_cols=157 Identities=10% Similarity=0.001 Sum_probs=94.1
Q ss_pred CCEEEEEEeeCCCEE-EEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCce
Q 048118 82 KDVLSVAFSIDNRQI-VSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCK 160 (303)
Q Consensus 82 ~~i~~i~~~~~~~~l-~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~ 160 (303)
..+..++|++....+ .+-..++.|..++..+.....+... .......+++.+.. .....+-...+.|.+.++....
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~--g~~~P~GlAvD~~~-~~LY~tD~~~~~I~v~~~dG~~ 113 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEF--GLDYPEGMAVDWLG-KNLYWADTGTNRIEVSKLDGQH 113 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS--SCSCCCEEEEETTT-TEEEEEETTTTEEEEEETTSTT
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeC--CCCCcceEEEEeCC-CEEEEEECCCCEEEEEecCCCc
Confidence 356789999865554 4555678888888765422222211 11234567777653 2234444556789999986543
Q ss_pred eEEEEcCCCCCeeEEEECCCCCEEEEEe--CCCeEEEEeCCCCceEEEecCCCeEEEEEEcCCCeEEEE--EcCCcEEEE
Q 048118 161 LRATLAGHTGYVNTVAVSPDGSLCASGG--KDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCA--ATEQSIKIW 236 (303)
Q Consensus 161 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~--~~~~~i~iw 236 (303)
....+...-.....+++.|....|..+. ..++|...++.................+++++++..|.. ...+.|..+
T Consensus 114 ~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~ 193 (628)
T 4a0p_A 114 RQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESS 193 (628)
T ss_dssp CEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEE
Confidence 3332323345568999998655554443 356888888765443322333456788999986543333 346789999
Q ss_pred eCCCC
Q 048118 237 DLESK 241 (303)
Q Consensus 237 d~~~~ 241 (303)
|+...
T Consensus 194 d~dG~ 198 (628)
T 4a0p_A 194 NMLGL 198 (628)
T ss_dssp ETTSC
T ss_pred cCCCC
Confidence 98654
No 305
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.23 E-value=0.14 Score=45.04 Aligned_cols=70 Identities=11% Similarity=0.116 Sum_probs=50.4
Q ss_pred CeeEEEECCCCCEEEEEe-CCCeEEEEeCCCCc-------------eEEEecCCCeEEEEEEcCCCeEEEEE-cCCcEEE
Q 048118 171 YVNTVAVSPDGSLCASGG-KDGVILLWDLAEGK-------------RLYSLDAGAVIHALCFSPNRYWLCAA-TEQSIKI 235 (303)
Q Consensus 171 ~i~~~~~~~~~~~l~~~~-~d~~v~iwd~~~~~-------------~~~~~~~~~~v~~~~~s~~~~~l~~~-~~~~i~i 235 (303)
....+.++|||++++.++ .+.++.++|++.-. .+.....+......+|.++|...++. -|.+|..
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvk 403 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVK 403 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEE
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEEE
Confidence 345688999999987766 58899999987421 12334455566778999999544443 4889999
Q ss_pred EeCCC
Q 048118 236 WDLES 240 (303)
Q Consensus 236 wd~~~ 240 (303)
||+..
T Consensus 404 Wni~~ 408 (638)
T 3sbq_A 404 WNMEE 408 (638)
T ss_dssp EEHHH
T ss_pred EeccH
Confidence 99864
No 306
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.70 E-value=0.95 Score=34.83 Aligned_cols=101 Identities=13% Similarity=0.128 Sum_probs=62.4
Q ss_pred ceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCcee------EEEEc--CCCCCeeEEEECCCCCEEEEEeCCCeEEEEeC
Q 048118 127 WVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKL------RATLA--GHTGYVNTVAVSPDGSLCASGGKDGVILLWDL 198 (303)
Q Consensus 127 ~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~------~~~~~--~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~ 198 (303)
.+..++|+|++ .|.+. .+|.+.-.+..+.+. ...+- +.. ....+.|.|+|.+.++ .||.|.-++.
T Consensus 42 ~~~~laf~P~G---~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~-~F~a~~fD~~G~LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 42 NFKFLFLSPGG---ELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWN-QFQFLFFDPNGYLYAV--SKDKLYKASP 114 (236)
T ss_dssp TCSEEEECTTS---CEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGG-GCSEEEECTTSCEEEE--ETTEEEEESC
T ss_pred cceeEEECCCc---cEEEE-eCCeEEEECCCCCCcccccccccEecccccc-cceEEEECCCCCEEEe--CCCEEEEeCC
Confidence 35689999976 24444 778777666544211 11121 111 1467899999988877 5699988876
Q ss_pred CCCceE------EEecC--CCeEEEEEEcCCCeEEEEEcCCcEEE
Q 048118 199 AEGKRL------YSLDA--GAVIHALCFSPNRYWLCAATEQSIKI 235 (303)
Q Consensus 199 ~~~~~~------~~~~~--~~~v~~~~~s~~~~~l~~~~~~~i~i 235 (303)
.+...- ..+.. -..+..+.|.|+|.+.++. ++.++-
T Consensus 115 P~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~lyr 158 (236)
T 1tl2_A 115 PQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQFYK 158 (236)
T ss_dssp CCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEEEE
T ss_pred CcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe-CCcEEe
Confidence 432110 00100 1356889999999988888 888653
No 307
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.67 E-value=0.046 Score=45.20 Aligned_cols=110 Identities=8% Similarity=0.067 Sum_probs=71.8
Q ss_pred EEEEEeCCCcEEEEECCCceeEEEEcCC-CCCeeEEEE--CC-CCCEEEEE-eCCCeEEEEeCCCCceEEEecC-----C
Q 048118 141 TIVSASWDRTVKVWNLSNCKLRATLAGH-TGYVNTVAV--SP-DGSLCASG-GKDGVILLWDLAEGKRLYSLDA-----G 210 (303)
Q Consensus 141 ~~~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~i~~~~~--~~-~~~~l~~~-~~d~~v~iwd~~~~~~~~~~~~-----~ 210 (303)
.++.++.||.|.-.|..+++.+.++... ..++....- .+ ++..++.. +.||.+..+|..+|.....+.. .
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~ 91 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVST 91 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTT
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccceec
Confidence 5788999999999999999988877653 122222111 01 22334443 5899999999988765544321 1
Q ss_pred CeEEE---EEE------cCCCeEEEEEcCCcEEEEeCCCCceeeeeeec
Q 048118 211 AVIHA---LCF------SPNRYWLCAATEQSIKIWDLESKSIVEDLKVD 250 (303)
Q Consensus 211 ~~v~~---~~~------s~~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~ 250 (303)
+++.. ... +.++.+++++.+++++..|+++|+.+.+....
T Consensus 92 SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 92 SPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp CSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred cccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence 22221 001 24667778888999999999999998877643
No 308
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=94.27 E-value=1.9 Score=35.41 Aligned_cols=86 Identities=7% Similarity=0.136 Sum_probs=60.0
Q ss_pred cEEEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEecCCCeEEEEEEcCCCeEEEEEc
Q 048118 150 TVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAAT 229 (303)
Q Consensus 150 ~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 229 (303)
.|.+.|+.+......- .-..-+..++|..+.+|.-. ..+++++|+++.+++..+.....|.=-.|-.+ ..|+.-+
T Consensus 50 ~VvIiDl~n~~~~~Rr---pi~AdsAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~e~VvfWkWis~-~~L~lVT 124 (365)
T 2xzh_A 50 QVVIIDMNDPSNPIRR---PISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISL-NTVALVT 124 (365)
T ss_dssp EEEEEETTSTTSCEEE---ECCCSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEECSS-SEEEEEE
T ss_pred EEEEEECCCCCCcccc---ccccceeeeCCCccEEEEec-CCeEEEechHHhhhhcceecCCccEEEEecCC-CeEEEEc
Confidence 5777888764322111 11223566799888887765 68999999999999988876666655556433 4566777
Q ss_pred CCcEEEEeCCC
Q 048118 230 EQSIKIWDLES 240 (303)
Q Consensus 230 ~~~i~iwd~~~ 240 (303)
+..|+-|+++.
T Consensus 125 ~taVyHWs~~~ 135 (365)
T 2xzh_A 125 DNAVYHWSMEG 135 (365)
T ss_dssp SSEEEEEESST
T ss_pred CCcEEEEcccC
Confidence 88999999875
No 309
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=94.06 E-value=3.3 Score=37.35 Aligned_cols=157 Identities=13% Similarity=0.008 Sum_probs=90.5
Q ss_pred CCEEEEEEeeCCCEEEEE-eCCCcEEEEecCCcee-eeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCc
Q 048118 82 KDVLSVAFSIDNRQIVSA-SRDRTIKLWNTLGECK-YTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNC 159 (303)
Q Consensus 82 ~~i~~i~~~~~~~~l~t~-~~d~~i~vw~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~ 159 (303)
..+..++|++.+..+.-+ ...+.|..++..+... ..+.. ........+++++.+ ....++-...+.|.+.++...
T Consensus 40 ~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~--~~~~~P~GlAvD~~~-~~ly~~d~~~~~I~v~~~dG~ 116 (619)
T 3s94_A 40 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVV--SGLLSPDGLACDWLG-EKLYWTDSETNRIEVSNLDGS 116 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEEC--SSCSCEEEEEEETTT-TEEEEEETTTTEEEEEETTSC
T ss_pred CceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEe--CCCCCcCeEEEEecC-CEEEEEeCCCCEEEEEECCCC
Confidence 456789999866655544 4456777777654321 11211 112346788888754 234444556788999998654
Q ss_pred eeEEEEcCCCCCeeEEEECCCCCEEEEEe--CCCeEEEEeCCCCceEEEe-cCCCeEEEEEEcCCCeEE-EE-EcCCcEE
Q 048118 160 KLRATLAGHTGYVNTVAVSPDGSLCASGG--KDGVILLWDLAEGKRLYSL-DAGAVIHALCFSPNRYWL-CA-ATEQSIK 234 (303)
Q Consensus 160 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~d~~v~iwd~~~~~~~~~~-~~~~~v~~~~~s~~~~~l-~~-~~~~~i~ 234 (303)
.....+...-.....+++.|.+..|..+. ..+.|...++......... ..-...+.+++++++..| .+ ...+.|+
T Consensus 117 ~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~ 196 (619)
T 3s94_A 117 LRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIH 196 (619)
T ss_dssp SCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEE
T ss_pred CEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEE
Confidence 43333333344567899999755554443 2467777776543322222 223457789999864333 33 3457899
Q ss_pred EEeCCCC
Q 048118 235 IWDLESK 241 (303)
Q Consensus 235 iwd~~~~ 241 (303)
.+|+...
T Consensus 197 ~~~~dG~ 203 (619)
T 3s94_A 197 KSNLDGT 203 (619)
T ss_dssp EESSSCC
T ss_pred EecCCCC
Confidence 9998654
No 310
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=93.35 E-value=2.1 Score=35.49 Aligned_cols=70 Identities=19% Similarity=0.207 Sum_probs=44.3
Q ss_pred CCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCc-eEEEec----CCCeEEEEEEcCC----CeEEEEEc----C----Cc
Q 048118 170 GYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK-RLYSLD----AGAVIHALCFSPN----RYWLCAAT----E----QS 232 (303)
Q Consensus 170 ~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~-~~~~~~----~~~~v~~~~~s~~----~~~l~~~~----~----~~ 232 (303)
.....++|.|+|++++ +..+|+|+++|. .++ .+..+. .......++++|+ +.+.++.. + +.
T Consensus 29 ~~P~~ia~~pdG~l~V-~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLV-TERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp SCEEEEEEEETTEEEE-EETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEEEcCCCeEEE-EeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 4567899999998555 456699999973 443 232221 2245788999997 44444332 2 56
Q ss_pred EEEEeCCCC
Q 048118 233 IKIWDLESK 241 (303)
Q Consensus 233 i~iwd~~~~ 241 (303)
|..|+....
T Consensus 107 v~r~~~~~~ 115 (354)
T 3a9g_A 107 VIRGRLDGS 115 (354)
T ss_dssp EEEEEECSS
T ss_pred EEEEEECCC
Confidence 777776543
No 311
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=93.22 E-value=3.1 Score=34.41 Aligned_cols=69 Identities=20% Similarity=0.291 Sum_probs=44.4
Q ss_pred CCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCc--eEEEec----CCCeEEEEEEcCC----CeEEEEEc-C-----CcE
Q 048118 170 GYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK--RLYSLD----AGAVIHALCFSPN----RYWLCAAT-E-----QSI 233 (303)
Q Consensus 170 ~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~--~~~~~~----~~~~v~~~~~s~~----~~~l~~~~-~-----~~i 233 (303)
..-..++|.|+|+++++ ..+++|++++ .++ .+..+. .......++++|+ +.+.++.. . +.|
T Consensus 31 ~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp SCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 45678999999986554 5669999998 333 222221 1346788999998 44433332 2 678
Q ss_pred EEEeCCCC
Q 048118 234 KIWDLESK 241 (303)
Q Consensus 234 ~iwd~~~~ 241 (303)
..|+....
T Consensus 108 ~r~~~~~~ 115 (352)
T 2ism_A 108 VRLRHLGE 115 (352)
T ss_dssp EEEEECSS
T ss_pred EEEEeCCC
Confidence 88887643
No 312
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=92.92 E-value=3.4 Score=34.15 Aligned_cols=144 Identities=15% Similarity=0.153 Sum_probs=74.2
Q ss_pred CCEEEEEEeeCCC-EEEEEeCCCcEEEEecCCceeeeeecC----CCCccceEEEEEcCC---CCCCEEEEEeC------
Q 048118 82 KDVLSVAFSIDNR-QIVSASRDRTIKLWNTLGECKYTIQEG----DAHTEWVSCVRFSPN---TLQPTIVSASW------ 147 (303)
Q Consensus 82 ~~i~~i~~~~~~~-~l~t~~~d~~i~vw~~~~~~~~~~~~~----~~~~~~i~~~~~~~~---~~~~~~~~~~~------ 147 (303)
.....|+|.|+|+ +++ +...+.|++++..+.....+... .........++++|+ .. ...++-..
T Consensus 18 ~~P~~i~~~pdG~~l~V-~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g-~lYv~~~~~~~~g~ 95 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLI-TLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSR-RIWLSYSEVGDDGK 95 (353)
T ss_dssp SSEEEEEECSTTCCEEE-EETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHC-EEEEEEEEECSSSC
T ss_pred CCcEEEEEcCCCCEEEE-EeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCC-EEEEEEeCCCCCCC
Confidence 3567899999998 555 55678898887543221111100 111234678999995 21 22232222
Q ss_pred -CCcEEEEECCCc--ee--EEE-EcCC------CCCeeEEEECCCCCEEEEEeC-------------CCeEEEEeCCCC-
Q 048118 148 -DRTVKVWNLSNC--KL--RAT-LAGH------TGYVNTVAVSPDGSLCASGGK-------------DGVILLWDLAEG- 201 (303)
Q Consensus 148 -dg~i~iwd~~~~--~~--~~~-~~~~------~~~i~~~~~~~~~~~l~~~~~-------------d~~v~iwd~~~~- 201 (303)
...|..|++... +. ... +..- ...-..+.|.|+|.+.++.+. .|+|.-+|....
T Consensus 96 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~ 175 (353)
T 2g8s_A 96 AGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEI 175 (353)
T ss_dssp EEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCC
T ss_pred ceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCC
Confidence 224555665432 11 111 1110 112356999999965555433 245666665432
Q ss_pred -------------ceEEEecCCCeEEEEEEcC-CCeEEEEE
Q 048118 202 -------------KRLYSLDAGAVIHALCFSP-NRYWLCAA 228 (303)
Q Consensus 202 -------------~~~~~~~~~~~v~~~~~s~-~~~~l~~~ 228 (303)
..+..... -....++|+| ++.+.++-
T Consensus 176 p~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~d 215 (353)
T 2g8s_A 176 PDDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLNE 215 (353)
T ss_dssp CTTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEEE
T ss_pred CCCCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEEe
Confidence 11222111 2356789999 66655543
No 313
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=92.74 E-value=3.1 Score=33.17 Aligned_cols=144 Identities=12% Similarity=0.168 Sum_probs=69.1
Q ss_pred CCCEEEEEeCC-----CcEEEEecCCce---eeeeecCCCCccceEEEEEcCCCCCCEEEEEeCC-----CcEEEEECCC
Q 048118 92 DNRQIVSASRD-----RTIKLWNTLGEC---KYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWD-----RTVKVWNLSN 158 (303)
Q Consensus 92 ~~~~l~t~~~d-----~~i~vw~~~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d-----g~i~iwd~~~ 158 (303)
++.+++.|+.+ ..+.+||..... ...............++.. ++ ..++.|+.+ ..+.+||..+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~--~lyv~GG~~~~~~~~~~~~~d~~~ 137 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GD--MIYVSGGFDGSRRHTSMERYDPNI 137 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TT--EEEEECCBCSSCBCCEEEEEETTT
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CC--EEEEEcccCCCcccceEEEEcCCC
Confidence 56667777754 357788875543 2222111111111122222 22 245555543 3588899887
Q ss_pred ceeEEE--EcCCCCCeeEEEECCCCCEEEEEeCC-----CeEEEEeCCCCceEEE--ecCCCeEEEEEEcCCCeEEE-EE
Q 048118 159 CKLRAT--LAGHTGYVNTVAVSPDGSLCASGGKD-----GVILLWDLAEGKRLYS--LDAGAVIHALCFSPNRYWLC-AA 228 (303)
Q Consensus 159 ~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~v~iwd~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~-~~ 228 (303)
++.... +.........+.+ +++.++.|+.+ ..+.++|+.+.+-... ....-.-.+++.. ++.+++ ++
T Consensus 138 ~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG 214 (301)
T 2vpj_A 138 DQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL-NDHIYVVGG 214 (301)
T ss_dssp TEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECC
T ss_pred CeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE-CCEEEEEeC
Confidence 664332 2111111122222 56677777654 4578889877653222 1111111122222 344443 33
Q ss_pred c-----CCcEEEEeCCCCc
Q 048118 229 T-----EQSIKIWDLESKS 242 (303)
Q Consensus 229 ~-----~~~i~iwd~~~~~ 242 (303)
. ...+.+||+++.+
T Consensus 215 ~~~~~~~~~v~~yd~~~~~ 233 (301)
T 2vpj_A 215 FDGTAHLSSVEAYNIRTDS 233 (301)
T ss_dssp BCSSSBCCCEEEEETTTTE
T ss_pred CCCCcccceEEEEeCCCCc
Confidence 3 2468999987654
No 314
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=92.67 E-value=4.4 Score=34.73 Aligned_cols=132 Identities=8% Similarity=0.128 Sum_probs=78.1
Q ss_pred CcEEEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEecCCCeEEEEEEcCCCeEEEEE
Q 048118 149 RTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAA 228 (303)
Q Consensus 149 g~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 228 (303)
..|.|.|+.+......- .-..-+..++|..+.+|.-. ..+++|+|+++.+++..+.....|.=-.|-.+ ..|+.-
T Consensus 48 ~~vvIiDl~~~~~~~rr---pi~AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis~-~~l~lV 122 (494)
T 1bpo_A 48 AQVVIIDMNDPSNPIRR---PISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISL-NTVALV 122 (494)
T ss_dssp CEEEEEETTSTTSCEEE---ECCCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEET-TEEEEE
T ss_pred CeEEEEECCCCCcceec---ccccceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecCC-CeEEEE
Confidence 36777888764322111 11233567899888877665 68999999999999888765444433344322 356777
Q ss_pred cCCcEEEEeCCCCce-eeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEee---c----CCeEEEEec
Q 048118 229 TEQSIKIWDLESKSI-VEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGY---T----DGVIRVWGI 300 (303)
Q Consensus 229 ~~~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs---~----Dg~v~~w~~ 300 (303)
++..|+-|++..... .+-..-+ ..+. ...+.+..-++++++++..+ . .|.+.+|..
T Consensus 123 T~taVyHWsi~~~s~P~kvFdR~--------------~~L~--~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~ 186 (494)
T 1bpo_A 123 TDNAVYHWSMEGESQPVKMFDRH--------------SSLA--GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSV 186 (494)
T ss_dssp CSSEEEEEESSSSCCCEEEEECC--------------GGGT--TCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEES
T ss_pred cCCeeEEecccCCCCchhheecc--------------hhcc--cceEEEEEECCCCCeEEEEeecccCCcccceEEEeec
Confidence 888999999965321 1111100 0111 24556677788888766332 2 355566655
Q ss_pred c
Q 048118 301 G 301 (303)
Q Consensus 301 ~ 301 (303)
.
T Consensus 187 e 187 (494)
T 1bpo_A 187 D 187 (494)
T ss_dssp T
T ss_pred c
Confidence 3
No 315
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=92.50 E-value=3.4 Score=33.05 Aligned_cols=144 Identities=11% Similarity=0.135 Sum_probs=69.1
Q ss_pred CCCEEEEEeCC----CcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCC------CcEEEEECCCcee
Q 048118 92 DNRQIVSASRD----RTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWD------RTVKVWNLSNCKL 161 (303)
Q Consensus 92 ~~~~l~t~~~d----~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d------g~i~iwd~~~~~~ 161 (303)
++.+++.|+.+ ..+.+||....................++.. ++ ..++.|+.+ ..+.+||..+.+.
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~--~iyv~GG~~~~~~~~~~~~~~d~~~~~W 130 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EG--KIYTSGGSEVGNSALYLFECYDTRTESW 130 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TT--EEEEECCBBTTBSCCCCEEEEETTTTEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CC--EEEEECCCCCCCcEeeeEEEEeCCCCce
Confidence 56667777754 5677788765543332211111111122222 22 245556654 4588999987764
Q ss_pred EEEEcCCCC--CeeEEEECCCCCEEEEEeC---------CCeEEEEeCCCCceEEE--ecCCCeEEEEEEcCCCeEEEE-
Q 048118 162 RATLAGHTG--YVNTVAVSPDGSLCASGGK---------DGVILLWDLAEGKRLYS--LDAGAVIHALCFSPNRYWLCA- 227 (303)
Q Consensus 162 ~~~~~~~~~--~i~~~~~~~~~~~l~~~~~---------d~~v~iwd~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~- 227 (303)
...-..... ....+.+ +++.++.|+. -..+.+||+.+.+-... ....-.-.+++.. ++.+++.
T Consensus 131 ~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~G 207 (306)
T 3ii7_A 131 HTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVG 207 (306)
T ss_dssp EEECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEEC
T ss_pred EeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEe
Confidence 432111111 1122222 5566677664 24578889877643221 1111111122222 3444433
Q ss_pred Ec-----CCcEEEEeCCCCc
Q 048118 228 AT-----EQSIKIWDLESKS 242 (303)
Q Consensus 228 ~~-----~~~i~iwd~~~~~ 242 (303)
+. -..+.+||.++.+
T Consensus 208 G~~~~~~~~~~~~yd~~~~~ 227 (306)
T 3ii7_A 208 GQNGLGGLDNVEYYDIKLNE 227 (306)
T ss_dssp CEETTEEBCCEEEEETTTTE
T ss_pred CCCCCCCCceEEEeeCCCCc
Confidence 32 2468889887653
No 316
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=92.26 E-value=4.6 Score=34.76 Aligned_cols=52 Identities=15% Similarity=0.303 Sum_probs=34.5
Q ss_pred CCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCce--EEEec-------CCCeEEEEEEcCC
Q 048118 170 GYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKR--LYSLD-------AGAVIHALCFSPN 221 (303)
Q Consensus 170 ~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~--~~~~~-------~~~~v~~~~~s~~ 221 (303)
.....++|.|+|+++++-...++|++++...++. +..+. .......++|+|+
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pd 87 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCC
Confidence 4567899999999777655445798887654442 22222 1234668999994
No 317
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=92.17 E-value=3.7 Score=32.74 Aligned_cols=144 Identities=10% Similarity=0.139 Sum_probs=67.5
Q ss_pred CCCEEEEEeCCC-----cEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeC-------CCcEEEEECCCc
Q 048118 92 DNRQIVSASRDR-----TIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASW-------DRTVKVWNLSNC 159 (303)
Q Consensus 92 ~~~~l~t~~~d~-----~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-------dg~i~iwd~~~~ 159 (303)
++..++.|+.++ .+.+||........+...........++.. ++ ..++.|+. -..+.+||+.++
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~--~iyv~GG~~~~~~~~~~~~~~yd~~~~ 183 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GG--LLYAVGGYDVASRQCLSTVECYNATTN 183 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TT--EEEEECCEETTTTEECCCEEEEETTTT
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CC--EEEEEeCCCCCCCccccEEEEEeCCCC
Confidence 566667777553 356677655443332211111111122222 21 24444543 245889998876
Q ss_pred eeEEE--EcCCCCCeeEEEECCCCCEEEEEeCC-----CeEEEEeCCCCceEEE--ecCCCeEEEEEEcCCCeEE-EEEc
Q 048118 160 KLRAT--LAGHTGYVNTVAVSPDGSLCASGGKD-----GVILLWDLAEGKRLYS--LDAGAVIHALCFSPNRYWL-CAAT 229 (303)
Q Consensus 160 ~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~v~iwd~~~~~~~~~--~~~~~~v~~~~~s~~~~~l-~~~~ 229 (303)
+.... +.........+.+ +++.++.|+.+ ..+.+||+.+.+-... ....-.-.+++.. ++.++ .++.
T Consensus 184 ~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~i~v~GG~ 260 (302)
T 2xn4_A 184 EWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAV-NGLLYVVGGD 260 (302)
T ss_dssp EEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCB
T ss_pred cEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEE-CCEEEEECCc
Confidence 64432 1111111222222 46677777754 3688899877653221 1111111112222 34443 4333
Q ss_pred C-----CcEEEEeCCCCc
Q 048118 230 E-----QSIKIWDLESKS 242 (303)
Q Consensus 230 ~-----~~i~iwd~~~~~ 242 (303)
+ ..+.+||.++.+
T Consensus 261 ~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 261 DGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp CSSSBCCCEEEEETTTTE
T ss_pred CCCcccccEEEEcCCCCe
Confidence 3 358888887653
No 318
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=91.97 E-value=3.9 Score=32.60 Aligned_cols=145 Identities=12% Similarity=0.196 Sum_probs=67.9
Q ss_pred CCCEEEEEeCC-----CcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCC-----cEEEEECCCcee
Q 048118 92 DNRQIVSASRD-----RTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDR-----TVKVWNLSNCKL 161 (303)
Q Consensus 92 ~~~~l~t~~~d-----~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg-----~i~iwd~~~~~~ 161 (303)
++.+++.|+.+ ..+.+||....................++.+ ++ ..++.|+.++ .+.+||+.+++.
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~--~iyv~GG~~~~~~~~~~~~~d~~~~~W 136 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NG--LLYAVGGFDGSTGLSSVEAYNIKSNEW 136 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TT--EEEEEEEECSSCEEEEEEEEETTTTEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--CC--EEEEEcCCCCCccCceEEEEeCCCCeE
Confidence 56677777754 3477788765543332211111111122222 22 2455565543 477889877664
Q ss_pred EEEEc--CCCCCeeEEEECCCCCEEEEEeCC-------CeEEEEeCCCCceEEE--ecCCCeEEEEEEcCCCeEEEEEcC
Q 048118 162 RATLA--GHTGYVNTVAVSPDGSLCASGGKD-------GVILLWDLAEGKRLYS--LDAGAVIHALCFSPNRYWLCAATE 230 (303)
Q Consensus 162 ~~~~~--~~~~~i~~~~~~~~~~~l~~~~~d-------~~v~iwd~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~ 230 (303)
...-. ........+.+ +++.++.|+.+ ..+.++|+.+.+-... ....-.-.+++...+..++.++.+
T Consensus 137 ~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 214 (302)
T 2xn4_A 137 FHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHD 214 (302)
T ss_dssp EEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBS
T ss_pred eecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCC
Confidence 43211 11111122222 45666776642 3578888877653221 111111112222223333343332
Q ss_pred -----CcEEEEeCCCCc
Q 048118 231 -----QSIKIWDLESKS 242 (303)
Q Consensus 231 -----~~i~iwd~~~~~ 242 (303)
..+.+||.++.+
T Consensus 215 ~~~~~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 215 GPLVRKSVEVYDPTTNA 231 (302)
T ss_dssp SSSBCCCEEEEETTTTE
T ss_pred CCcccceEEEEeCCCCC
Confidence 468899987653
No 319
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=91.62 E-value=5.1 Score=33.14 Aligned_cols=76 Identities=17% Similarity=0.197 Sum_probs=47.5
Q ss_pred EcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCce--EEEec-----CCCeEEEEEEcCC----CeEEEE-E--cC
Q 048118 165 LAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKR--LYSLD-----AGAVIHALCFSPN----RYWLCA-A--TE 230 (303)
Q Consensus 165 ~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~--~~~~~-----~~~~v~~~~~s~~----~~~l~~-~--~~ 230 (303)
+...-.....++|.|+|+++++-...|+|++++...++. +..+. .......++++|+ +.+.+. + .+
T Consensus 27 va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~ 106 (347)
T 3das_A 27 VATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASD 106 (347)
T ss_dssp EECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSS
T ss_pred eecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCC
Confidence 333345678999999999877665589999998665543 22221 2345678999985 433332 2 34
Q ss_pred CcEEEEeCCC
Q 048118 231 QSIKIWDLES 240 (303)
Q Consensus 231 ~~i~iwd~~~ 240 (303)
+.|.-|.+..
T Consensus 107 ~~v~R~~~~~ 116 (347)
T 3das_A 107 NRIVRMLYDE 116 (347)
T ss_dssp EEEEEEEBCT
T ss_pred CEEEEEEeCC
Confidence 5566665543
No 320
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=91.45 E-value=4.5 Score=32.21 Aligned_cols=106 Identities=10% Similarity=0.098 Sum_probs=54.0
Q ss_pred CCCEEEEEeCC-----CcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCC-----CcEEEEECCCcee
Q 048118 92 DNRQIVSASRD-----RTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWD-----RTVKVWNLSNCKL 161 (303)
Q Consensus 92 ~~~~l~t~~~d-----~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d-----g~i~iwd~~~~~~ 161 (303)
++.+++.|+.+ ..+.+||........+.........-.++.. ++ ..++.|+.+ ..+.+||+.+++.
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~--~iyv~GG~~~~~~~~~~~~~d~~~~~W 187 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SG--VIYCLGGYDGLNILNSVEKYDPHTGHW 187 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TT--EEEEECCBCSSCBCCCEEEEETTTTEE
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CC--EEEEECCCCCCcccceEEEEeCCCCcE
Confidence 56666777654 3567778765443332211111111122222 22 245556554 4588999887764
Q ss_pred EEEEcCCC--CCeeEEEECCCCCEEEEEeCC-----CeEEEEeCCCCce
Q 048118 162 RATLAGHT--GYVNTVAVSPDGSLCASGGKD-----GVILLWDLAEGKR 203 (303)
Q Consensus 162 ~~~~~~~~--~~i~~~~~~~~~~~l~~~~~d-----~~v~iwd~~~~~~ 203 (303)
...-.... .....+.+ +++.++.|+.+ ..+.+||+.+.+-
T Consensus 188 ~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 234 (301)
T 2vpj_A 188 TNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSW 234 (301)
T ss_dssp EEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred EeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcE
Confidence 43211111 11122223 46677777764 4688899887653
No 321
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=91.30 E-value=12 Score=36.64 Aligned_cols=89 Identities=8% Similarity=0.014 Sum_probs=51.3
Q ss_pred eEEEEeCCCCceEEEecC--CCeEEEEEEcCCCeEEEEEcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccc
Q 048118 192 VILLWDLAEGKRLYSLDA--GAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKK 269 (303)
Q Consensus 192 ~v~iwd~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (303)
.|++.+...+..+..+.. +..|...+.+. .+++.+ .++.+..++++.+++....+. .+
T Consensus 493 ~Irli~~~~~~~~~~w~~p~~~~I~~As~n~-~~vvva-~g~~l~~fel~~~~L~~~~~~----------------~l-- 552 (1158)
T 3ei3_A 493 SVRLVSQEPKALVSEWKEPQAKNISVASCNS-SQVVVA-VGRALYYLQIHPQELRQISHT----------------EM-- 552 (1158)
T ss_dssp CEEEEESSSCCEEEEECCTTCCCCCEEEECS-SEEEEE-ETTEEEEEEEETTEEEEEEEE----------------EC--
T ss_pred EEEEEECCCCeEEEEEECCCCCEEEEEEeCC-CEEEEE-ECCEEEEEEeeCCceeeeccc----------------CC--
Confidence 466677655555555543 33555555543 344444 567888887765543221110 11
Q ss_pred cceeEEEEEEcCC------CCEEEEeec-CCeEEEEecc
Q 048118 270 KNIYCTSLNWSVD------GSTLFSGYT-DGVIRVWGIG 301 (303)
Q Consensus 270 ~~~~~~~~~~sp~------~~~l~~gs~-Dg~v~~w~~~ 301 (303)
...+.++++.|. +.++++|.. |++|+++++.
T Consensus 553 -~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~ 590 (1158)
T 3ei3_A 553 -EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLP 590 (1158)
T ss_dssp -SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETT
T ss_pred -CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECC
Confidence 112455666543 469999997 9999999874
No 322
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=90.37 E-value=6.7 Score=32.35 Aligned_cols=25 Identities=24% Similarity=0.291 Sum_probs=17.3
Q ss_pred eeeeecCCCCCcEEEEecCCCcEEEEE
Q 048118 18 VTAIATPIDNSDMIVTASRDKSIIVWH 44 (303)
Q Consensus 18 v~~v~~~~~~~~~~~t~s~d~~i~iw~ 44 (303)
...+++.|++ +++++ ..++.|.+++
T Consensus 33 P~~ia~~pdG-~l~V~-e~~g~I~~i~ 57 (352)
T 2ism_A 33 PWALAFLPDG-GMLIA-ERPGRIRLFR 57 (352)
T ss_dssp EEEEEECTTS-CEEEE-ETTTEEEEEE
T ss_pred ceEEEEcCCC-eEEEE-eCCCeEEEEE
Confidence 4678888875 45555 4558888886
No 323
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=90.17 E-value=7 Score=32.29 Aligned_cols=104 Identities=19% Similarity=0.165 Sum_probs=57.4
Q ss_pred CCEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecC---CCCccceEEEEEcCCCC--CCEEEEEeC---C----C
Q 048118 82 KDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEG---DAHTEWVSCVRFSPNTL--QPTIVSASW---D----R 149 (303)
Q Consensus 82 ~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~--~~~~~~~~~---d----g 149 (303)
.....++|.|+|.+++ +..++.|++++..+. ..+... .........++++|+-. ....++-.. + .
T Consensus 29 ~~P~~ia~~pdG~l~V-~e~~g~I~~~d~~G~--~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLV-TERPGRLVLISPSGK--KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp SCEEEEEEEETTEEEE-EETTTEEEEECSSCE--EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCeEEEEcCCCeEEE-EeCCCEEEEEeCCCc--eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 3567899999998555 456688988875433 112111 11223578899999611 122233221 2 4
Q ss_pred cEEEEECCCc--e------eEEEEcC-CCCCeeEEEECCCCCEEEEEe
Q 048118 150 TVKVWNLSNC--K------LRATLAG-HTGYVNTVAVSPDGSLCASGG 188 (303)
Q Consensus 150 ~i~iwd~~~~--~------~~~~~~~-~~~~i~~~~~~~~~~~l~~~~ 188 (303)
.|..|+.... . ....+.. .......++|.|+|.+.++.+
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 5777776543 1 1111221 111245789999998766643
No 324
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=89.93 E-value=15 Score=35.80 Aligned_cols=189 Identities=8% Similarity=-0.050 Sum_probs=94.5
Q ss_pred CCEEEEEEeeC------CCEEEEEeC-CCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEE
Q 048118 82 KDVLSVAFSID------NRQIVSASR-DRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVW 154 (303)
Q Consensus 82 ~~i~~i~~~~~------~~~l~t~~~-d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iw 154 (303)
++|.|+++.+. +.+++.|.. |++++++.+........+.... .....++.+..-....++..|-.||.+..+
T Consensus 554 ~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~-~~~p~si~l~~~~~~~~L~igl~dG~l~~~ 632 (1158)
T 3ei3_A 554 HEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGG-EIIPRSILMTTFESSHYLLCALGDGALFYF 632 (1158)
T ss_dssp SCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCS-SCCEEEEEEEEETTEEEEEEEETTSEEEEE
T ss_pred CceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCC-CCCCcEEEEEEeCCCcEEEEEeCCCeEEEE
Confidence 46778877653 358888886 9999999986433222222111 112333333211123578889999998766
Q ss_pred ECC--CceeE---EEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEecCCCeEEEEEEcCCC--eEEEE
Q 048118 155 NLS--NCKLR---ATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNR--YWLCA 227 (303)
Q Consensus 155 d~~--~~~~~---~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~--~~l~~ 227 (303)
.+. ++++. ..+-+ ..++.-..+...+..-+.+..++...++.-+..-....+.....-....|+... .-++.
T Consensus 633 ~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~~~l~~s~l~~~~v~~~~~F~se~~~~g~v~ 711 (1158)
T 3ei3_A 633 GLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLAL 711 (1158)
T ss_dssp EECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEEEESSSCEEEEESSSSEEEEEBSSSCCCEEEEECCSSSTTEEEE
T ss_pred EEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEEEECCCCEEEEEcCCceEEeccChHHhceEeccCcccCCCcEEE
Confidence 543 44432 22333 345554445444443333333455545543322222222333333444565432 22334
Q ss_pred EcCCcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeec
Q 048118 228 ATEQSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYT 291 (303)
Q Consensus 228 ~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~ 291 (303)
.+++.++|..+..-.....-++++. ..+..++++|+.+.++++..
T Consensus 712 ~~~~~LrI~~i~~~~~~~~~~ipL~-------------------~Tprri~y~~~~~~~~v~~~ 756 (1158)
T 3ei3_A 712 ANNSTLTIGTIDEIQKLHIRTVPLY-------------------ESPRKICYQEVSQCFGVLSS 756 (1158)
T ss_dssp ECSSCEEEEEECCSSSEEEEEEECS-------------------SEEEEEEEEGGGTEEEEEEE
T ss_pred EcCCceEEEEecccCCeeEEEEeCC-------------------CCceEEEEcCCCCEEEEEEE
Confidence 5566788887754322211111111 12356778887776665543
No 325
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=89.86 E-value=7.5 Score=32.12 Aligned_cols=107 Identities=15% Similarity=0.057 Sum_probs=58.9
Q ss_pred CCEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecC----CCCccceEEEEEcCCCC--CCEEEEE--eCCCcEEE
Q 048118 82 KDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEG----DAHTEWVSCVRFSPNTL--QPTIVSA--SWDRTVKV 153 (303)
Q Consensus 82 ~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~----~~~~~~i~~~~~~~~~~--~~~~~~~--~~dg~i~i 153 (303)
...+.|+|.|+|.++++--..+.|++++..+.....+... .........++++|+-. ....++- ..+..|.-
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R 111 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVR 111 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEE
Confidence 4678999999999887766589898887543222111111 11234578899999511 1122221 23445555
Q ss_pred EECCCc----------ee-EEEEcC-CCCCeeEEEECCCCCEEEEEe
Q 048118 154 WNLSNC----------KL-RATLAG-HTGYVNTVAVSPDGSLCASGG 188 (303)
Q Consensus 154 wd~~~~----------~~-~~~~~~-~~~~i~~~~~~~~~~~l~~~~ 188 (303)
|.+... +. ...+.. ....-..+.|.|+|.+.++.+
T Consensus 112 ~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 112 MLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp EEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred EEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 655431 11 112221 111235689999998776654
No 326
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=89.67 E-value=7.6 Score=31.95 Aligned_cols=113 Identities=9% Similarity=0.103 Sum_probs=61.8
Q ss_pred EEEEEeCCCcEEEEecC-CceeeeeecCCCCccceEEEEEcCCCCCCEEEEE--eCCCcEEEEECCCceeEEEEcC----
Q 048118 95 QIVSASRDRTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSA--SWDRTVKVWNLSNCKLRATLAG---- 167 (303)
Q Consensus 95 ~l~t~~~d~~i~vw~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~dg~i~iwd~~~~~~~~~~~~---- 167 (303)
.++.++.||.|.-.|.. ++.++..... ...++....-........++.+ ..||.+..++..++.....+..
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~--~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHIIWSIEPE--NFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECGG--GSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCC--ccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 56778888888888754 3344443221 1011111110000001133333 5899999999887754433321
Q ss_pred CCCCeeE---EEE-C----CCCCEEEEEeCCCeEEEEeCCCCceEEEecC
Q 048118 168 HTGYVNT---VAV-S----PDGSLCASGGKDGVILLWDLAEGKRLYSLDA 209 (303)
Q Consensus 168 ~~~~i~~---~~~-~----~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~ 209 (303)
...++.. ..+ . ..+..+.+|+.+|++...|+++|+.+..+..
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 1122221 000 0 1345778999999999999999998887753
No 327
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=88.77 E-value=11 Score=32.46 Aligned_cols=107 Identities=13% Similarity=0.168 Sum_probs=56.1
Q ss_pred CCEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecC-C-----CCccceEEEEEcCCCC--CCEEEEEeC------
Q 048118 82 KDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEG-D-----AHTEWVSCVRFSPNTL--QPTIVSASW------ 147 (303)
Q Consensus 82 ~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~-~-----~~~~~i~~~~~~~~~~--~~~~~~~~~------ 147 (303)
...+.|+|.|+|.++++-...+.|++++........+... . ........++|+|+-. ..+.++-+.
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 3567999999998777654445688776432211111111 1 1234577899999521 112222221
Q ss_pred ------CCcEEEEECCCc--ee------EEEEcC-CCCCeeEEEECCCCCEEEEEe
Q 048118 148 ------DRTVKVWNLSNC--KL------RATLAG-HTGYVNTVAVSPDGSLCASGG 188 (303)
Q Consensus 148 ------dg~i~iwd~~~~--~~------~~~~~~-~~~~i~~~~~~~~~~~l~~~~ 188 (303)
...|.-++.... +. ...+.. .......++|.|+|.+.++.+
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 124555554321 11 111221 112367899999998776644
No 328
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=88.57 E-value=8.3 Score=30.92 Aligned_cols=105 Identities=10% Similarity=0.072 Sum_probs=51.8
Q ss_pred CCCEEEEEeCC--------CcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeC-C-----CcEEEEECC
Q 048118 92 DNRQIVSASRD--------RTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASW-D-----RTVKVWNLS 157 (303)
Q Consensus 92 ~~~~l~t~~~d--------~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-d-----g~i~iwd~~ 157 (303)
++..++.|+.+ ..+.+||....................++.. ++ ..++.|+. + ..+.+||..
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~--~iyv~GG~~~~~~~~~~~~~yd~~ 173 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSH--MD--LVYVIGGKGSDRKCLNKMCVYDPK 173 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TT--EEEEECCBCTTSCBCCCEEEEETT
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEE--CC--EEEEEeCCCCCCcccceEEEEeCC
Confidence 55666666632 3477788765433222211111111122222 21 24555655 2 468899988
Q ss_pred CceeEEEEcCCCC--CeeEEEECCCCCEEEEEeCCC-----eEEEEeCCCCc
Q 048118 158 NCKLRATLAGHTG--YVNTVAVSPDGSLCASGGKDG-----VILLWDLAEGK 202 (303)
Q Consensus 158 ~~~~~~~~~~~~~--~i~~~~~~~~~~~l~~~~~d~-----~v~iwd~~~~~ 202 (303)
+.+....-..... ....+.+ +++.++.|+.++ .+.++|+.+.+
T Consensus 174 ~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 174 KFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp TTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred CCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCe
Confidence 7654322111111 1122222 567777777654 57788887764
No 329
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=88.54 E-value=9.4 Score=31.49 Aligned_cols=98 Identities=17% Similarity=0.239 Sum_probs=53.8
Q ss_pred eEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeEEEE-------cCCCCCeeEEEECCC---CCEE-EEEeC-------
Q 048118 128 VSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATL-------AGHTGYVNTVAVSPD---GSLC-ASGGK------- 189 (303)
Q Consensus 128 i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~-------~~~~~~i~~~~~~~~---~~~l-~~~~~------- 189 (303)
...++|.|++.. ++.+...|.|++++.. ++....+ .........++++|+ +..| ++-+.
T Consensus 20 P~~i~~~pdG~~--l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 20 PWALAFLPDNHG--MLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp EEEEEECSTTCC--EEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred cEEEEEcCCCCE--EEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 467889998621 4556678999999853 3221111 112345688999995 4444 43332
Q ss_pred CCeEEEEeCCCC-------ceEEE-ecC----CCeEEEEEEcCCCeEEEEE
Q 048118 190 DGVILLWDLAEG-------KRLYS-LDA----GAVIHALCFSPNRYWLCAA 228 (303)
Q Consensus 190 d~~v~iwd~~~~-------~~~~~-~~~----~~~v~~~~~s~~~~~l~~~ 228 (303)
..+|..+++... +.+.. +.. ......++|.|++.+.++.
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~ 147 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIAL 147 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEE
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEE
Confidence 235666665432 11111 111 1224568999999665554
No 330
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=86.77 E-value=11 Score=30.18 Aligned_cols=106 Identities=9% Similarity=0.109 Sum_probs=52.5
Q ss_pred CCCEEEEEeCC-----CcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCC-----CcEEEEECCCcee
Q 048118 92 DNRQIVSASRD-----RTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWD-----RTVKVWNLSNCKL 161 (303)
Q Consensus 92 ~~~~l~t~~~d-----~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d-----g~i~iwd~~~~~~ 161 (303)
++.+++.|+.+ ..+.+||..................-.++.+ ++ ..++.|+.+ ..+.+||+.+.+.
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~--~iyv~GG~~~~~~~~~~~~yd~~~~~W 196 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NR--LLYAVGGFDGTNRLNSAECYYPERNEW 196 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TT--EEEEECCBCSSCBCCCEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CC--EEEEEeCCCCCCcCceEEEEeCCCCeE
Confidence 55666666643 3466777755433322111111111122222 22 245555544 4588999877654
Q ss_pred EEE--EcCCCCCeeEEEECCCCCEEEEEeCC-----CeEEEEeCCCCce
Q 048118 162 RAT--LAGHTGYVNTVAVSPDGSLCASGGKD-----GVILLWDLAEGKR 203 (303)
Q Consensus 162 ~~~--~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~v~iwd~~~~~~ 203 (303)
... +.........+.+ +++.++.|+.+ ..+.+||+.+.+-
T Consensus 197 ~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 243 (308)
T 1zgk_A 197 RMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETW 243 (308)
T ss_dssp EECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred eeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcE
Confidence 321 1111111222333 56677777754 4688899877653
No 331
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=86.44 E-value=11 Score=29.99 Aligned_cols=103 Identities=14% Similarity=0.185 Sum_probs=51.9
Q ss_pred EEEEEeC--CCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCC----CcEEEEECCCceeEEEEcCC
Q 048118 95 QIVSASR--DRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWD----RTVKVWNLSNCKLRATLAGH 168 (303)
Q Consensus 95 ~l~t~~~--d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d----g~i~iwd~~~~~~~~~~~~~ 168 (303)
+++.|+. ...+.+||........+...........++.. ++ ..++.|+.+ ..+.+||..+++....-...
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~--~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p 89 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW--DN--VVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP 89 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEE--TT--EEEEECCBSSSBCCEEEEEETTTTEEEEEECCS
T ss_pred EEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEE--CC--EEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC
Confidence 4445554 35677888765543332211111111122222 21 245566654 56888998877644322111
Q ss_pred C--CCeeEEEECCCCCEEEEEeCC------CeEEEEeCCCCce
Q 048118 169 T--GYVNTVAVSPDGSLCASGGKD------GVILLWDLAEGKR 203 (303)
Q Consensus 169 ~--~~i~~~~~~~~~~~l~~~~~d------~~v~iwd~~~~~~ 203 (303)
. .....+.+ +++.++.|+.+ ..+.+||+.+.+-
T Consensus 90 ~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W 130 (306)
T 3ii7_A 90 TPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESW 130 (306)
T ss_dssp SCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEE
T ss_pred ccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCce
Confidence 1 11222222 56677777765 4688889887653
No 332
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=84.40 E-value=14 Score=29.45 Aligned_cols=144 Identities=10% Similarity=0.095 Sum_probs=67.1
Q ss_pred CCCEEEEEeC----C-----CcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCC-----CcEEEEECC
Q 048118 92 DNRQIVSASR----D-----RTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWD-----RTVKVWNLS 157 (303)
Q Consensus 92 ~~~~l~t~~~----d-----~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~d-----g~i~iwd~~ 157 (303)
++.+++.|+. + ..+.+||........+...........++.+ ++ ..++.|+.+ ..+.+||..
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~--~iyv~GG~~~~~~~~~~~~yd~~ 145 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DG--HIYAVGGSHGCIHHNSVERYEPE 145 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TT--EEEEECCEETTEECCCEEEEETT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE--CC--EEEEEcCCCCCcccccEEEECCC
Confidence 5556666665 2 3567778765443322211111111122222 22 244555433 468889987
Q ss_pred CceeEEE--EcCCCCCeeEEEECCCCCEEEEEeCC-----CeEEEEeCCCCceEEE--ecCCCeEEEEEEcCCCeEE-EE
Q 048118 158 NCKLRAT--LAGHTGYVNTVAVSPDGSLCASGGKD-----GVILLWDLAEGKRLYS--LDAGAVIHALCFSPNRYWL-CA 227 (303)
Q Consensus 158 ~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~v~iwd~~~~~~~~~--~~~~~~v~~~~~s~~~~~l-~~ 227 (303)
+.+.... +.........+.+ +++.++.|+.+ ..+.++|+.+.+-... ....-.-.+++.. ++.++ ..
T Consensus 146 ~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~G 222 (308)
T 1zgk_A 146 RDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL-HNCIYAAG 222 (308)
T ss_dssp TTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEEC
T ss_pred CCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE-CCEEEEEe
Confidence 7654322 1111111122223 56677777654 4578888876643211 1111111122222 44444 33
Q ss_pred EcC-----CcEEEEeCCCCc
Q 048118 228 ATE-----QSIKIWDLESKS 242 (303)
Q Consensus 228 ~~~-----~~i~iwd~~~~~ 242 (303)
+.+ ..+.+||+++.+
T Consensus 223 G~~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 223 GYDGQDQLNSVERYDVETET 242 (308)
T ss_dssp CBCSSSBCCCEEEEETTTTE
T ss_pred CCCCCCccceEEEEeCCCCc
Confidence 332 568899987653
No 333
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=84.22 E-value=14 Score=29.46 Aligned_cols=93 Identities=12% Similarity=0.110 Sum_probs=44.8
Q ss_pred CcEEEEECCCceeEEEEcCCCCCe-eEEEECCCCCEEEEEeC-C-----CeEEEEeCCCCceEEE--ecCCCeEEEEEEc
Q 048118 149 RTVKVWNLSNCKLRATLAGHTGYV-NTVAVSPDGSLCASGGK-D-----GVILLWDLAEGKRLYS--LDAGAVIHALCFS 219 (303)
Q Consensus 149 g~i~iwd~~~~~~~~~~~~~~~~i-~~~~~~~~~~~l~~~~~-d-----~~v~iwd~~~~~~~~~--~~~~~~v~~~~~s 219 (303)
..+.+||..+++....-.-..... .++.. .+++.++.|+. + ..+.++|+.+.+-... ....-.-.+++..
T Consensus 117 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 195 (315)
T 4asc_A 117 DSVMCYDRLSFKWGESDPLPYVVYGHTVLS-HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH 195 (315)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE
T ss_pred ceEEEECCCCCcEeECCCCCCcccceeEEE-ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE
Confidence 458899988765432111111111 12222 34567777775 2 3688888877643221 1111111122222
Q ss_pred CCCeEEEEEcCC-----cEEEEeCCCCc
Q 048118 220 PNRYWLCAATEQ-----SIKIWDLESKS 242 (303)
Q Consensus 220 ~~~~~l~~~~~~-----~i~iwd~~~~~ 242 (303)
.+..++.++.++ .+.+||.++.+
T Consensus 196 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 196 DGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp TTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred CCEEEEEeccCCCCccceEEEEECCCCe
Confidence 333444444332 58888887653
No 334
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=82.36 E-value=17 Score=29.02 Aligned_cols=52 Identities=17% Similarity=0.266 Sum_probs=28.6
Q ss_pred CcEEEEECCCceeEEEEcCCC--CCeeEEEECCCCCEEEEEeCC-----CeEEEEeCCCCc
Q 048118 149 RTVKVWNLSNCKLRATLAGHT--GYVNTVAVSPDGSLCASGGKD-----GVILLWDLAEGK 202 (303)
Q Consensus 149 g~i~iwd~~~~~~~~~~~~~~--~~i~~~~~~~~~~~l~~~~~d-----~~v~iwd~~~~~ 202 (303)
..+.+||..+++....-.... .....+.+ +++.++.|+.+ ..+.+||+.+.+
T Consensus 175 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 175 NRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred ceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 458899998776443211111 11122222 46677777643 256688887765
No 335
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=80.53 E-value=18 Score=36.08 Aligned_cols=87 Identities=7% Similarity=0.146 Sum_probs=57.6
Q ss_pred CcEEEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEecCCCeEEEEEEcCCCeEEEEE
Q 048118 149 RTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAA 228 (303)
Q Consensus 149 g~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 228 (303)
..|.|.|+.++..... ..-..-+..++|..+.+|.-. ..+++|+|+.+.+++..+.....|.=-.|-. ...++.-
T Consensus 48 ~~vvIidl~~~~~~~r---rpi~AdsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e~VvfWkWis-~~~l~lV 122 (1630)
T 1xi4_A 48 AQVVIIDMNDPSNPIR---RPISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWIS-LNTVALV 122 (1630)
T ss_pred ceEEEEECCCCCCccc---ccccchhhccCCCcceEEEec-CCeEEEeehHHhhhhcccccCCCceEEEecC-CCeeEEE
Confidence 3677778866432211 111223456789888777664 6899999999988887776655554444533 3456777
Q ss_pred cCCcEEEEeCCC
Q 048118 229 TEQSIKIWDLES 240 (303)
Q Consensus 229 ~~~~i~iwd~~~ 240 (303)
++..|+-|++..
T Consensus 123 T~~aVyHW~~~~ 134 (1630)
T 1xi4_A 123 TDNAVYHWSMEG 134 (1630)
T ss_pred cCCeEEEeccCC
Confidence 788999999964
No 336
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=75.46 E-value=4.8 Score=38.37 Aligned_cols=38 Identities=8% Similarity=0.048 Sum_probs=32.0
Q ss_pred CeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEec
Q 048118 171 YVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLD 208 (303)
Q Consensus 171 ~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~ 208 (303)
.+.++...++..++.+-+.|+++|+|++.+++++.+.+
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 45667777788899999999999999999999887753
No 337
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=71.89 E-value=48 Score=28.53 Aligned_cols=52 Identities=19% Similarity=0.168 Sum_probs=32.9
Q ss_pred CCeeEEEECCCCC-EEEEEeCCCeEEEEeCCCC---ceEEEec----C------CCeEEEEEEcCC
Q 048118 170 GYVNTVAVSPDGS-LCASGGKDGVILLWDLAEG---KRLYSLD----A------GAVIHALCFSPN 221 (303)
Q Consensus 170 ~~i~~~~~~~~~~-~l~~~~~d~~v~iwd~~~~---~~~~~~~----~------~~~v~~~~~s~~ 221 (303)
..-..|+|.|++. .++++...|.|++++.... +.+..+. . ..-...++|+|+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 4557899999985 3445667899999975422 1222221 1 234667899986
No 338
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=70.14 E-value=39 Score=26.86 Aligned_cols=92 Identities=12% Similarity=0.235 Sum_probs=43.3
Q ss_pred cEEEEECCCceeEEEEcCCCCCe-eEEEECCCCCEEEEEeC------CCeEEEEeCCCCceEEE--ecCCCeEEEEEEcC
Q 048118 150 TVKVWNLSNCKLRATLAGHTGYV-NTVAVSPDGSLCASGGK------DGVILLWDLAEGKRLYS--LDAGAVIHALCFSP 220 (303)
Q Consensus 150 ~i~iwd~~~~~~~~~~~~~~~~i-~~~~~~~~~~~l~~~~~------d~~v~iwd~~~~~~~~~--~~~~~~v~~~~~s~ 220 (303)
.+.+||..+.+....-....... .++.. .+++.++.|+. -..+.++|+.+.+-... ....-.-.+++...
T Consensus 128 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~ 206 (318)
T 2woz_A 128 SVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHK 206 (318)
T ss_dssp EEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEET
T ss_pred eEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEEC
Confidence 47888988766443211111111 11222 35666677764 23588899887653221 11111111222223
Q ss_pred CCeEEEEEcC-----CcEEEEeCCCCc
Q 048118 221 NRYWLCAATE-----QSIKIWDLESKS 242 (303)
Q Consensus 221 ~~~~l~~~~~-----~~i~iwd~~~~~ 242 (303)
+..++.++.+ ..+.+||+++.+
T Consensus 207 ~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 207 GKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp TEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred CEEEEEcCcCCCCccceEEEEECCCCe
Confidence 3334444332 357788877653
No 339
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=68.29 E-value=15 Score=32.59 Aligned_cols=83 Identities=11% Similarity=0.093 Sum_probs=48.5
Q ss_pred CCeEEEEEEcCCCeEEEEEc--CCcEEEEeCCCCceeeeeee-ccccccccccCccceeeccccceeEEEEEEcCCCCEE
Q 048118 210 GAVIHALCFSPNRYWLCAAT--EQSIKIWDLESKSIVEDLKV-DLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTL 286 (303)
Q Consensus 210 ~~~v~~~~~s~~~~~l~~~~--~~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l 286 (303)
......+..+|||.+++++. +..+.++|++.-...-.-++ ...... ..... -.......+|.++|...
T Consensus 322 pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~--------~ae~e-~GlGPlHt~Fd~~G~aY 392 (638)
T 3sbq_A 322 PKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVI--------VGEPE-LGLGPLHTTFDGRGNAY 392 (638)
T ss_dssp SSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGE--------EECCB-CCSCEEEEEECSSSEEE
T ss_pred CCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccce--------Eeecc-CCCcccEEEECCCCceE
Confidence 33445677899998887765 67899999864211000000 000000 00000 12334668899999666
Q ss_pred EEeecCCeEEEEecc
Q 048118 287 FSGYTDGVIRVWGIG 301 (303)
Q Consensus 287 ~~gs~Dg~v~~w~~~ 301 (303)
.|-.-|..|.-|++.
T Consensus 393 TtlfidSqvvkWni~ 407 (638)
T 3sbq_A 393 TTLFIDSQVVKWNME 407 (638)
T ss_dssp EEETTTTEEEEEEHH
T ss_pred eeeeecceEEEEecc
Confidence 677789999999985
No 340
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=66.69 E-value=5.3 Score=38.89 Aligned_cols=37 Identities=8% Similarity=0.066 Sum_probs=30.4
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEec
Q 048118 172 VNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLD 208 (303)
Q Consensus 172 i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~ 208 (303)
+-+++..++..++++-+.|+++|+||+.+++++.+.+
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 3445566777899999999999999999999887753
No 341
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=65.52 E-value=81 Score=28.71 Aligned_cols=108 Identities=8% Similarity=0.102 Sum_probs=56.1
Q ss_pred CCCEEEEEeCCC------cEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCC--cEEEEECCCceeEE
Q 048118 92 DNRQIVSASRDR------TIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDR--TVKVWNLSNCKLRA 163 (303)
Q Consensus 92 ~~~~l~t~~~d~------~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg--~i~iwd~~~~~~~~ 163 (303)
++..++.||.++ .+.+||..................-.++.+. ++ ..++.|+.++ .+.+||..+++...
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~-~~--~iyv~GG~~~~~~v~~yd~~t~~W~~ 527 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLP-DG--NVLILGGVTEGPAMLLYNVTEEIFKD 527 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECT-TS--CEEEECCBCSSCSEEEEETTTTEEEE
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEc-CC--EEEEECCCCCCCCEEEEECCCCceEE
Confidence 666777777543 4667777654333221111111111222222 22 3556666554 68999998776433
Q ss_pred EEc-----CCCCCeeEEEECCC-CCEEEEEeC--C-----CeEEEEeCCCCc
Q 048118 164 TLA-----GHTGYVNTVAVSPD-GSLCASGGK--D-----GVILLWDLAEGK 202 (303)
Q Consensus 164 ~~~-----~~~~~i~~~~~~~~-~~~l~~~~~--d-----~~v~iwd~~~~~ 202 (303)
.-. ........+.+..+ ++.++.|+. + ..+.+||+.+.+
T Consensus 528 ~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 528 VTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp CCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred ccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 211 11112233555554 667777775 2 358889988776
No 342
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=65.11 E-value=52 Score=26.34 Aligned_cols=138 Identities=8% Similarity=0.039 Sum_probs=69.9
Q ss_pred EEeeCCCEEEEEeCC--------------CcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEe----CCC
Q 048118 88 AFSIDNRQIVSASRD--------------RTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSAS----WDR 149 (303)
Q Consensus 88 ~~~~~~~~l~t~~~d--------------~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~----~dg 149 (303)
-+++++.+|+-+... ..|+..++.+.....+... .+..+++.+ ..++-.. .+.
T Consensus 59 ~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~-------~~~~~s~~g--~~Iy~~~~~~~~~~ 129 (302)
T 3s25_A 59 YINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPD-------PCIYASLIG--NYIYYLHYDTQTAT 129 (302)
T ss_dssp EEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECS-------CEEEEEEET--TEEEEEEESSSSCE
T ss_pred eEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecC-------CccEEEEeC--CEEEEEeecCCCCc
Confidence 346777777666442 3455555554432222211 112455554 2444433 334
Q ss_pred cEEEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEeC-CCeEEEEeCCCCceEEEecCCCeEEEEEEcCCCeEEEEE
Q 048118 150 TVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGK-DGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAA 228 (303)
Q Consensus 150 ~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 228 (303)
.|...++.... ...+..+.. ..++|+++.|.-.+. ..+|.+.++..+.....+. +. .. ..+.|++.+|.-.
T Consensus 130 ~Iy~~~~dGs~-~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~-~~-~~-~~~~P~g~~iy~t 201 (302)
T 3s25_A 130 SLYRIRIDGEE-KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD-CN-CY-KPVVLDDTNVYYM 201 (302)
T ss_dssp EEEEEETTSCC-CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC-SC-EE-EEEEEETTEEEEE
T ss_pred eEEEEECCCCC-eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC-CC-cc-ceeeecCCEEEEE
Confidence 55555665433 333443322 345778888776554 6788888887665432222 22 22 2355776555443
Q ss_pred c-C--CcEEEEeCCCCc
Q 048118 229 T-E--QSIKIWDLESKS 242 (303)
Q Consensus 229 ~-~--~~i~iwd~~~~~ 242 (303)
. . ..|..-++....
T Consensus 202 ~~~~~~~I~~~~ldG~~ 218 (302)
T 3s25_A 202 DVNRDNAIVHVNINNPN 218 (302)
T ss_dssp EGGGTTEEEEECSSSCC
T ss_pred EcCCCcEEEEEECCCCC
Confidence 2 2 357666665543
No 343
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=63.56 E-value=13 Score=33.88 Aligned_cols=35 Identities=11% Similarity=0.166 Sum_probs=27.9
Q ss_pred eeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEec
Q 048118 172 VNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLD 208 (303)
Q Consensus 172 i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~ 208 (303)
|.++.+ +..++++-+.|+++|+||+.+++.+.+.+
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 444444 46799999999999999999999877654
No 344
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=59.02 E-value=70 Score=25.82 Aligned_cols=54 Identities=9% Similarity=0.002 Sum_probs=22.5
Q ss_pred eEEEEeCCCCce--EEEecCCCeEEEEEEcCCCeEEEEEcC------CcEEEEeCCCCceee
Q 048118 192 VILLWDLAEGKR--LYSLDAGAVIHALCFSPNRYWLCAATE------QSIKIWDLESKSIVE 245 (303)
Q Consensus 192 ~v~iwd~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~~~~------~~i~iwd~~~~~~~~ 245 (303)
.+.+||+.+.+- +..+...-.-.+++...+..++.++.+ ..+.++++++++.+.
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~ 347 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTV 347 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBSSEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEE
T ss_pred eEEEEecCCCceeeCCCCCCCcccceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEe
Confidence 467888876542 222221111111222223344445432 246667877766543
No 345
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=58.68 E-value=88 Score=26.87 Aligned_cols=55 Identities=15% Similarity=0.215 Sum_probs=33.5
Q ss_pred CCEEEEEEeeCCC-EEEEEeCCCcEEEEecCCcee-eeeec-----CC----CCccceEEEEEcCC
Q 048118 82 KDVLSVAFSIDNR-QIVSASRDRTIKLWNTLGECK-YTIQE-----GD----AHTEWVSCVRFSPN 136 (303)
Q Consensus 82 ~~i~~i~~~~~~~-~l~t~~~d~~i~vw~~~~~~~-~~~~~-----~~----~~~~~i~~~~~~~~ 136 (303)
...+.|+|.|++. +++.+...+.|++++..+... ..+.. .. ........++++|+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 3567899999996 455567789999997533211 01110 00 11345788999996
No 346
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=57.10 E-value=90 Score=29.74 Aligned_cols=29 Identities=14% Similarity=0.040 Sum_probs=24.7
Q ss_pred EEEEEEcCCCCEEEEeecCCeEEEEeccc
Q 048118 274 CTSLNWSVDGSTLFSGYTDGVIRVWGIGR 302 (303)
Q Consensus 274 ~~~~~~sp~~~~l~~gs~Dg~v~~w~~~~ 302 (303)
+.+++..++..++++=+.|+++|+|++.+
T Consensus 238 ~~~~~~~~~~~~lftl~~D~~LRiWsl~t 266 (950)
T 4gq2_M 238 IISMIFLSTYNVLVMLSLDYKLKVLDLST 266 (950)
T ss_dssp EEEEEEETTTTEEEEEETTCEEEEEETTT
T ss_pred EEEEeecCCCcEEEEEECCCEEEEEECCC
Confidence 45677788889999999999999999754
No 347
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=56.47 E-value=81 Score=28.92 Aligned_cols=37 Identities=32% Similarity=0.638 Sum_probs=29.5
Q ss_pred eEEEEEEcCCCeEEEEEcCCcEEEEeCCCCceeeeeee
Q 048118 212 VIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKV 249 (303)
Q Consensus 212 ~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~~~ 249 (303)
.|.++.+ ++..+++.+-|.++++||+++++.+....+
T Consensus 223 ~Is~~~~-~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF-HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE-TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc-CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 4555544 467888999999999999999998877665
No 348
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=55.13 E-value=1.3e+02 Score=27.56 Aligned_cols=156 Identities=8% Similarity=0.030 Sum_probs=0.0
Q ss_pred CCEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCC----CccceEEEEEcCCCCCCEEEEEeCCCcEEEEECC
Q 048118 82 KDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDA----HTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLS 157 (303)
Q Consensus 82 ~~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~ 157 (303)
..|.++.-..+|.+.+.. ++-|..++.............. ....|.++...+++ .+-.|+..+-+..+|..
T Consensus 373 ~~v~~i~~d~~g~lWigt--~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g---~lWigT~~~Gl~~~~~~ 447 (758)
T 3ott_A 373 NRIRHIYEDKEQQLWIAT--DGSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAG---QLWISTCLGGIFVVDKH 447 (758)
T ss_dssp SCEEEEEECTTSCEEEEE--TTEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTS---EEEEEESSSCEEEEEHH
T ss_pred CceEEEEECCCCCEEEEe--CCcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCC---CEEEEECCCceEEEccc
Q ss_pred C------ceeE--EEEcCCCC----CeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEecC----CCeEEEEEEcCC
Q 048118 158 N------CKLR--ATLAGHTG----YVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDA----GAVIHALCFSPN 221 (303)
Q Consensus 158 ~------~~~~--~~~~~~~~----~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~----~~~v~~~~~s~~ 221 (303)
+ .... ..+....+ .|.++...++|++.+.++..+-+..+|..+++...-... ...+.++....+
T Consensus 448 ~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~~~t~~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~ 527 (758)
T 3ott_A 448 KLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDNEGNVWVLLYNNKGIDKINPRTREVTKLFADELTGEKSPNYLLCDED 527 (758)
T ss_dssp HHHHCCSSEEECSEEECGGGTCSCSCEEEEEECTTSCEEEEETTCSSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTT
T ss_pred cccccCCcceecccccccccccccceeeeEEEcCCCCEEEEccCCCCcEEEeCCCCceEEecCCCcCCCcccceEEECCC
Q ss_pred CeEEEEEcCCcEEEEeCCCCce
Q 048118 222 RYWLCAATEQSIKIWDLESKSI 243 (303)
Q Consensus 222 ~~~l~~~~~~~i~iwd~~~~~~ 243 (303)
+.+-+++..| +..||.++.+.
T Consensus 528 g~lWigt~~G-l~~~~~~~~~~ 548 (758)
T 3ott_A 528 GLLWVGFHGG-VMRINPKDESQ 548 (758)
T ss_dssp SCEEEEETTE-EEEECC--CCC
T ss_pred CCEEEEecCc-eEEEecCCCce
No 349
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=52.46 E-value=93 Score=27.69 Aligned_cols=18 Identities=39% Similarity=0.558 Sum_probs=14.6
Q ss_pred eEEEEEEcCCCCEEEEee
Q 048118 273 YCTSLNWSVDGSTLFSGY 290 (303)
Q Consensus 273 ~~~~~~~sp~~~~l~~gs 290 (303)
.++.++|+||+++|+++-
T Consensus 532 EpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 532 EVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEEEECTTSSEEEEEE
T ss_pred cccCCEECCCCCEEEEEE
Confidence 357899999999888764
No 350
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=49.06 E-value=1.6e+02 Score=26.84 Aligned_cols=150 Identities=12% Similarity=0.107 Sum_probs=73.9
Q ss_pred eCCCEEEEEeCC----CcEEEEecCCceeeeee-c-----CCCCccceEEEEEcCCCCCCEEEEEeCC------CcEEEE
Q 048118 91 IDNRQIVSASRD----RTIKLWNTLGECKYTIQ-E-----GDAHTEWVSCVRFSPNTLQPTIVSASWD------RTVKVW 154 (303)
Q Consensus 91 ~~~~~l~t~~~d----~~i~vw~~~~~~~~~~~-~-----~~~~~~~i~~~~~~~~~~~~~~~~~~~d------g~i~iw 154 (303)
.++..++.||.+ ..+.+||........+. . .......-.++.+..++ ..++.||.+ ..+.+|
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~--~lyv~GG~~~~~~~~~dv~~y 473 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNN--QLLLIGGRKAPHQGLSDNWIF 473 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTT--EEEEECCBSSTTCBCCCCEEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCC--EEEEEcCCCCCCCccccEEEE
Confidence 456677777753 35677776554333332 1 01111112233332122 245556543 357889
Q ss_pred ECCCceeEEEEcCCCCC-eeEEEECCCCCEEEEEeCCC--eEEEEeCCCCceEEEec------CCCeEEEEEEcCC-CeE
Q 048118 155 NLSNCKLRATLAGHTGY-VNTVAVSPDGSLCASGGKDG--VILLWDLAEGKRLYSLD------AGAVIHALCFSPN-RYW 224 (303)
Q Consensus 155 d~~~~~~~~~~~~~~~~-i~~~~~~~~~~~l~~~~~d~--~v~iwd~~~~~~~~~~~------~~~~v~~~~~s~~-~~~ 224 (303)
|..+++....-...... -.+...-.+++.++.|+.++ .+.+||..+.+-...-. ......++.+..+ +.+
T Consensus 474 d~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~i 553 (695)
T 2zwa_A 474 DMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQG 553 (695)
T ss_dssp ETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEE
T ss_pred eCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEE
Confidence 98876543221111111 12233324778888888654 68899988765322111 1111222444544 444
Q ss_pred EEEE-c--C-----CcEEEEeCCCCc
Q 048118 225 LCAA-T--E-----QSIKIWDLESKS 242 (303)
Q Consensus 225 l~~~-~--~-----~~i~iwd~~~~~ 242 (303)
++.+ . + +.+++||+.+..
T Consensus 554 yv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 554 IILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp EEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred EEECCcCCCCCeeeCcEEEEEccCCc
Confidence 4433 2 1 358899987665
No 351
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=47.19 E-value=2.4e+02 Score=28.57 Aligned_cols=160 Identities=12% Similarity=0.151 Sum_probs=79.6
Q ss_pred CCEEEEEEeeCCCEEEEEe-------CCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEE-EeC---CCc
Q 048118 82 KDVLSVAFSIDNRQIVSAS-------RDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVS-ASW---DRT 150 (303)
Q Consensus 82 ~~i~~i~~~~~~~~l~t~~-------~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~---dg~ 150 (303)
..|..-..+++.++++..| -.|.+.+|...... .+..++|......+...-+.....+++ +.. .+.
T Consensus 151 ~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~---sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~k 227 (1630)
T 1xi4_A 151 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV---SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGK 227 (1630)
T ss_pred CeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc---chhhhHhHhhhheeccCCCCCCceEEEEEEecCCCce
Confidence 3466777788888776544 23667777653221 122233433332232221111111222 111 267
Q ss_pred EEEEECCCc-----eeE----EE-EcC--CCCCeeEEEECCCCCEEEEEeCCCeEEEEeCCCCceEEEecC-CCeEEEEE
Q 048118 151 VKVWNLSNC-----KLR----AT-LAG--HTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDA-GAVIHALC 217 (303)
Q Consensus 151 i~iwd~~~~-----~~~----~~-~~~--~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~~~~~~~~~~~-~~~v~~~~ 217 (303)
+++-++... ... .. +.. ..+---++..++.-..+..-+.-|.+.++|+.++..++.-.. ..+|-..+
T Consensus 228 Lhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~ 307 (1630)
T 1xi4_A 228 LHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTA 307 (1630)
T ss_pred EEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEEec
Confidence 888877432 110 00 010 112233566677666777778899999999999988765321 22333222
Q ss_pred Ec-CCCeEEEEEcCCcEEEEeCCCCcee
Q 048118 218 FS-PNRYWLCAATEQSIKIWDLESKSIV 244 (303)
Q Consensus 218 ~s-~~~~~l~~~~~~~i~iwd~~~~~~~ 244 (303)
.+ +.+-++++...|.|.--.+....++
T Consensus 308 ~~~~~~g~~~vnr~G~vl~v~v~~~~iv 335 (1630)
T 1xi4_A 308 PHEATAGIIGVNRKGQVLSVCVEEENII 335 (1630)
T ss_pred cCCCCCceEEEcCCceEEEEEEccchhh
Confidence 22 2344555555555554444444333
No 352
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=47.09 E-value=77 Score=28.28 Aligned_cols=59 Identities=19% Similarity=0.127 Sum_probs=35.5
Q ss_pred EEEEEEcCCCeEEEEEcC-------------CcEEEEeCCCCceeeeeeeccccccccccCccceeeccccceeEEEEEE
Q 048118 213 IHALCFSPNRYWLCAATE-------------QSIKIWDLESKSIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNW 279 (303)
Q Consensus 213 v~~~~~s~~~~~l~~~~~-------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (303)
.--|+|+|.|.++++... +.+.+.+..++++...+... ....++.++|
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P-------------------~gaE~TG~~f 538 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGP-------------------IGCEVTGISF 538 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECC-------------------TTCEEEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCC-------------------CCccCcCeeE
Confidence 345889998875444321 23556666666654433321 1223567899
Q ss_pred cCCCCEEEEee
Q 048118 280 SVDGSTLFSGY 290 (303)
Q Consensus 280 sp~~~~l~~gs 290 (303)
+||+++|++.-
T Consensus 539 spDg~tlfvni 549 (592)
T 3zwu_A 539 SPDQKTLFVGI 549 (592)
T ss_dssp CTTSSEEEEEE
T ss_pred CCCCCEEEEEE
Confidence 99999888763
No 353
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=45.72 E-value=1.5e+02 Score=25.62 Aligned_cols=190 Identities=13% Similarity=0.190 Sum_probs=100.0
Q ss_pred EeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCc-eeEEEEcC
Q 048118 89 FSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNC-KLRATLAG 167 (303)
Q Consensus 89 ~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~-~~~~~~~~ 167 (303)
.+|....+|.=. ...+.++|+....+...... .+..+..-..+++. + .-=.+..|+.|++.+. .+...+.-
T Consensus 73 MnP~~~iiALra-g~~lQiFnle~K~klks~~~--~e~VvfWkWis~~~----l-~lVT~taVyHWsi~~~s~P~kvFdR 144 (494)
T 1bpo_A 73 MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM--TDDVTFWKWISLNT----V-ALVTDNAVYHWSMEGESQPVKMFDR 144 (494)
T ss_dssp ECSSSSCEEEEE-TTEEEEEETTTTEEEEEEEC--SSCCCEEEEEETTE----E-EEECSSEEEEEESSSSCCCEEEEEC
T ss_pred eCCCCcEEEEec-CCeEEEEchHHhhhhcceec--CCCceEEEecCCCe----E-EEEcCCeeEEecccCCCCchhheec
Confidence 455554444333 57899999976655433221 22334444445542 2 2235678999999653 45555554
Q ss_pred CC----CCeeEEEECCCCCEEEEEe---CC----CeEEEEeCCCCceEEEecCC-CeEEEEEEc--CC-CeEEEEEc---
Q 048118 168 HT----GYVNTVAVSPDGSLCASGG---KD----GVILLWDLAEGKRLYSLDAG-AVIHALCFS--PN-RYWLCAAT--- 229 (303)
Q Consensus 168 ~~----~~i~~~~~~~~~~~l~~~~---~d----~~v~iwd~~~~~~~~~~~~~-~~v~~~~~s--~~-~~~l~~~~--- 229 (303)
|. ..|.....+++.++++..+ .+ |.+.+|..+.+.. +.++.. .....+... +. ..+++.+.
T Consensus 145 ~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s-Q~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~ 223 (494)
T 1bpo_A 145 HSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS-QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQ 223 (494)
T ss_dssp CGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCE-EEECCSEEEEEEEECTTCSSEEEEEEEEECST
T ss_pred chhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccccc-chheeeeeeeEEEecCCCCCCceEEEEEEecC
Confidence 42 4577778899999876443 23 5667777654321 112211 111111111 11 13344332
Q ss_pred -CCcEEEEeCCCCc-----e-eeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEecc
Q 048118 230 -EQSIKIWDLESKS-----I-VEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIG 301 (303)
Q Consensus 230 -~~~i~iwd~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~ 301 (303)
.+++++-++.... . .+...+...+ ....-+..++..|+....+..-..-|.+++||+.
T Consensus 224 ~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fpp--------------e~~~DFPvamqvs~kygviyviTK~G~i~lyDle 288 (494)
T 1bpo_A 224 AGGKLHIIEVGTPPTGNQPFPKKAVDVFFPP--------------EAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLE 288 (494)
T ss_dssp TCCEEEEEECSCCCTTCCCCCCEEEECCCCT--------------TSTTCCEEEEEEETTTTEEEEEETTSEEEEEETT
T ss_pred CCcEEEEEEcCCCccCCCCccceeeeeeCCc--------------ccccCceeEEEecccCCEEEEEecCceEEEEecc
Confidence 3678888874320 0 0000100000 1112234567788888888888889999999874
No 354
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=41.75 E-value=1.3e+02 Score=23.92 Aligned_cols=85 Identities=7% Similarity=-0.039 Sum_probs=45.5
Q ss_pred CcEEEEECCCceeEEEEcCCCCCeeEEEECCCCCEEEEEe----CCCeEEEEeCCCCceEEEecCCCeEEEEEEcCCCeE
Q 048118 149 RTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGG----KDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYW 224 (303)
Q Consensus 149 g~i~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~ 224 (303)
..|+..++...+.. .+.. .. ...++++++.|+-.. ....|...++...+...-..... .++++++..
T Consensus 88 ~~Iy~i~~dg~~~~-~l~~--~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g~~ 158 (302)
T 3s25_A 88 NSLCRIKRNGHGST-VLDP--DP--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL----FTCNTSDRY 158 (302)
T ss_dssp EEEEEEETTSCCCE-EEEC--SC--EEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC----CCSEEETTE
T ss_pred CeEEEEeCCCCcce-Eeec--CC--ccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc----eEeeEECCE
Confidence 45777777655432 2322 22 235677888877654 34466666665433222122211 345666655
Q ss_pred EEEEc--CCcEEEEeCCCCc
Q 048118 225 LCAAT--EQSIKIWDLESKS 242 (303)
Q Consensus 225 l~~~~--~~~i~iwd~~~~~ 242 (303)
|.-.. ..+|+.-++..+.
T Consensus 159 iy~t~~g~~~Iy~~~l~g~~ 178 (302)
T 3s25_A 159 FYYNNPKNGQLYRYDTASQS 178 (302)
T ss_dssp EEEECTTTCCEEEEETTTTE
T ss_pred EEEEeCCCceEEEEECCCCC
Confidence 55444 4678888876554
No 355
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=38.95 E-value=82 Score=20.76 Aligned_cols=21 Identities=0% Similarity=-0.053 Sum_probs=9.1
Q ss_pred EEEcCCCeEEEEEcCCcEEEEe
Q 048118 216 LCFSPNRYWLCAATEQSIKIWD 237 (303)
Q Consensus 216 ~~~s~~~~~l~~~~~~~i~iwd 237 (303)
+.+..+|.++....++.+ +|.
T Consensus 61 l~l~~dGNLVl~d~~~~~-iW~ 81 (113)
T 3mez_B 61 MRLGHSGELDITDDRLNT-VFV 81 (113)
T ss_dssp EEECTTSCEEEECTTSCE-EEE
T ss_pred EEEeCCCcEEEECCCCCE-EEE
Confidence 445555554443333332 444
No 356
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=35.77 E-value=2.4e+02 Score=25.19 Aligned_cols=56 Identities=21% Similarity=0.246 Sum_probs=35.0
Q ss_pred eeEEEECCCCCEEEEEeCC------------CeEEEEeCCCCceE--EEecCCCeEEEEEEcCCCeEEEE
Q 048118 172 VNTVAVSPDGSLCASGGKD------------GVILLWDLAEGKRL--YSLDAGAVIHALCFSPNRYWLCA 227 (303)
Q Consensus 172 i~~~~~~~~~~~l~~~~~d------------~~v~iwd~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~~ 227 (303)
.-.|.|+|.|++++.--.+ ..+.+.+..+++.. .+...+..+..++|+||+..|.+
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfv 547 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFV 547 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEE
Confidence 3568999999976654221 13444455555432 22345688999999999755433
No 357
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=32.55 E-value=88 Score=30.48 Aligned_cols=31 Identities=19% Similarity=0.235 Sum_probs=24.7
Q ss_pred CEEEEEEeeCCCEEEEEeCCCcEEEEecCCc
Q 048118 83 DVLSVAFSIDNRQIVSASRDRTIKLWNTLGE 113 (303)
Q Consensus 83 ~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~ 113 (303)
.+.+++..++..++.|-+.|+++|+|++...
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~ 269 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTN 269 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTT
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCC
Confidence 3455666778889999999999999998543
No 358
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=32.31 E-value=1.8e+02 Score=22.75 Aligned_cols=183 Identities=15% Similarity=0.157 Sum_probs=0.0
Q ss_pred CEEEEEEeeCCCEEEEEeCCCcEEEEecCCceeeeeecCCCCccceEEEEEcCCCCCCEEEEEeCCCcEEEEECCCceeE
Q 048118 83 DVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLR 162 (303)
Q Consensus 83 ~i~~i~~~~~~~~l~t~~~d~~i~vw~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~dg~i~iwd~~~~~~~ 162 (303)
.|..++.......+++ |+.|..|-........+. ......|..++-.... .++. . ||.|..|-....-..
T Consensus 25 ~i~~ia~G~~h~~~l~---~G~v~~wG~n~~Gqlg~p--~~~~~~i~~ia~G~~h---s~~l-~-~G~v~~wG~n~~Gql 94 (282)
T 3qhy_B 25 GVDAIAGGYFHGLALK---GGKVLGWGANLNGQLTMP--AATQSGVDAIAAGNYH---SLAL-K-DGEVIAWGGNEDGQT 94 (282)
T ss_dssp SCCEEEECSSEEEEEE---TTEEEEEECCSSSTTSCC--GGGGSCCCEEEECSSE---EEEE-E-TTEEEEEECCTTSTT
T ss_pred CCcEEEeCCCeEEEEE---CCEEEEEeCCCCCCCCCC--ccCCCCEEEEEeCCCE---EEEE-E-CCEEEEeeCCCCCCC
Q ss_pred EEEcCCCCCeeEEEECCCCCEEEEEeCCCeEEEEeCC-CCceEEEecCCCeEEEEEEcCCCeEEEEEcCCcEEEEeCCCC
Q 048118 163 ATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLA-EGKRLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESK 241 (303)
Q Consensus 163 ~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~v~iwd~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~ 241 (303)
..-..-...|..++.......+++ ||.|..|-.. .++.-........|..++....-.++.. +|.++.|-....
T Consensus 95 g~P~~~~~~v~~ia~G~~hs~al~---~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~~~l~--~G~v~~wG~n~~ 169 (282)
T 3qhy_B 95 TVPAEARSGVDAIAAGAWASYALK---DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTALAVK--NGGVIAWGDNYF 169 (282)
T ss_dssp CCCGGGSSSEEEEEEETTEEEEEE---TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEEEE--TTEEEEEECCTT
T ss_pred CCCcccCCCeEEEECcCCEEEEEe---CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEEEEEE--CCEEEEecCCCC
Q ss_pred ceeeeeeeccccccccccCccceeeccccceeEEEEEEcCCCCEEEEeecCCeEEEEecccC
Q 048118 242 SIVEDLKVDLKTEAEKSEATTATTTIKKKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIGRY 303 (303)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~l~~gs~Dg~v~~w~~~~~ 303 (303)
..+. .-......+..++-......++ .||.|..|.-+.|
T Consensus 170 gqlg--------------------~p~~~~~~v~~i~~G~~hs~al---~~G~v~~wG~n~~ 208 (282)
T 3qhy_B 170 GQTT--------------------VPAEAQSGVDDVAGGIFHSLAL---KDGKVIAWGDNRY 208 (282)
T ss_dssp STTS--------------------CCGGGGSSEEEEEECSSEEEEE---ETTEEEEEECCTT
T ss_pred CCCC--------------------CceecCCCeEEEEecCCEEEEE---ECCeEEEEECCCC
No 359
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=29.49 E-value=2.2e+02 Score=22.78 Aligned_cols=41 Identities=17% Similarity=0.278 Sum_probs=21.1
Q ss_pred CcEEEEECCCceeEEEEcCC-CCCe-eEEEECCCCCEEEEEeCC
Q 048118 149 RTVKVWNLSNCKLRATLAGH-TGYV-NTVAVSPDGSLCASGGKD 190 (303)
Q Consensus 149 g~i~iwd~~~~~~~~~~~~~-~~~i-~~~~~~~~~~~l~~~~~d 190 (303)
..+.+||..+.+....-... .... .++.. .+++.++.|+.+
T Consensus 86 ~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~ 128 (357)
T 2uvk_A 86 NDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV-HNGKAYVTGGVN 128 (357)
T ss_dssp CCEEEEETTTTEEEECSCCCSSCCSSEEEEE-ETTEEEEEECCC
T ss_pred ccEEEEeCCCCcEEECCCCCCcccccceEEE-ECCEEEEEeCcC
Confidence 46889998876643321111 1111 12222 456777888754
No 360
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=27.61 E-value=3.3e+02 Score=24.28 Aligned_cols=57 Identities=19% Similarity=0.239 Sum_probs=36.7
Q ss_pred CeeEEEECCCCCEEEEEeC------------CCeEEEEeCCCCceEEEe--cCCCeEEEEEEcCCCeEEEE
Q 048118 171 YVNTVAVSPDGSLCASGGK------------DGVILLWDLAEGKRLYSL--DAGAVIHALCFSPNRYWLCA 227 (303)
Q Consensus 171 ~i~~~~~~~~~~~l~~~~~------------d~~v~iwd~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~ 227 (303)
....|.|.++|.+.+.... ...+..++..+++....+ .....++.++|+||+..|.+
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV 547 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFV 547 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEE
Confidence 4567999999987763311 115666666666543333 23567899999999865543
No 361
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=27.13 E-value=2.5e+02 Score=24.35 Aligned_cols=55 Identities=15% Similarity=0.041 Sum_probs=35.9
Q ss_pred EEEEEeCCCcEEEEECC-Cce-------eEEEEcC--CCCCeeEEEECCCCCEEEEEeCCCeEEE
Q 048118 141 TIVSASWDRTVKVWNLS-NCK-------LRATLAG--HTGYVNTVAVSPDGSLCASGGKDGVILL 195 (303)
Q Consensus 141 ~~~~~~~dg~i~iwd~~-~~~-------~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~d~~v~i 195 (303)
.+..|+.+|.|.-.-+. ... ...++.- ...+|..+.++++.++|.+++.++.++|
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 46667888887654332 111 2223332 3468899999999999999988877665
No 362
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=23.63 E-value=1.7e+02 Score=25.73 Aligned_cols=55 Identities=7% Similarity=-0.065 Sum_probs=34.4
Q ss_pred EEEEEeCCCcEEEEECCCc----eeEEEEc--CCCCCee-EEEECCCCCEEEEEeCCCeEEE
Q 048118 141 TIVSASWDRTVKVWNLSNC----KLRATLA--GHTGYVN-TVAVSPDGSLCASGGKDGVILL 195 (303)
Q Consensus 141 ~~~~~~~dg~i~iwd~~~~----~~~~~~~--~~~~~i~-~~~~~~~~~~l~~~~~d~~v~i 195 (303)
.+..|+.+|.|.-.-+... ....++. ....+|. .+.+++++.+|.+++.++.++|
T Consensus 415 V~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 415 VVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred EEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 5667888888765544321 1222222 1235674 8899998889988887665554
No 363
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=23.51 E-value=3.5e+02 Score=24.12 Aligned_cols=55 Identities=5% Similarity=-0.061 Sum_probs=36.0
Q ss_pred EEEEEeCCCcEEEEECCC-c----e-eEEEEc--CCCCCeeEEEECCCCCEEEEEeCCCeEEE
Q 048118 141 TIVSASWDRTVKVWNLSN-C----K-LRATLA--GHTGYVNTVAVSPDGSLCASGGKDGVILL 195 (303)
Q Consensus 141 ~~~~~~~dg~i~iwd~~~-~----~-~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~d~~v~i 195 (303)
.+..|+.+|.|.-.-+.. + . ...++. ....+|..+.++++...|.+++.++.+++
T Consensus 382 VlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 382 VLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 456688888876543322 2 1 122332 23567899999999889988888776665
No 364
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=23.44 E-value=3.2e+02 Score=22.71 Aligned_cols=54 Identities=13% Similarity=0.216 Sum_probs=31.9
Q ss_pred EEEEECCCc--eeEEEEcC------CCCCeeEEEEC---CC----CCEE-EEEeCCCeEEEEeCCCCceE
Q 048118 151 VKVWNLSNC--KLRATLAG------HTGYVNTVAVS---PD----GSLC-ASGGKDGVILLWDLAEGKRL 204 (303)
Q Consensus 151 i~iwd~~~~--~~~~~~~~------~~~~i~~~~~~---~~----~~~l-~~~~~d~~v~iwd~~~~~~~ 204 (303)
|.+||++++ +..+.+.- ....+..+++. |. +.+. ++=+..+.|.|+|+.+++.-
T Consensus 125 Lv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~sw 194 (381)
T 3q6k_A 125 IVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSW 194 (381)
T ss_dssp EEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEE
Confidence 445677766 65554432 12356777776 22 2233 34345778999999887643
Done!