Query 048119
Match_columns 266
No_of_seqs 170 out of 1700
Neff 10.6
Searched_HMMs 46136
Date Fri Mar 29 06:26:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048119.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/048119hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0156 Cytochrome P450 CYP2 s 100.0 3.7E-35 8E-40 250.6 26.4 226 30-262 25-278 (489)
2 PLN02687 flavonoid 3'-monooxyg 100.0 1.1E-30 2.4E-35 228.6 27.5 240 13-259 16-282 (517)
3 PLN03234 cytochrome P450 83B1; 100.0 2.2E-29 4.7E-34 219.9 26.7 225 29-259 26-276 (499)
4 PLN00110 flavonoid 3',5'-hydro 100.0 3.1E-29 6.7E-34 218.6 26.1 242 9-258 11-277 (504)
5 PLN03112 cytochrome P450 famil 100.0 8.3E-29 1.8E-33 216.9 26.9 235 19-259 20-285 (514)
6 PLN02971 tryptophan N-hydroxyl 100.0 1.2E-28 2.7E-33 216.6 27.1 226 28-259 54-316 (543)
7 PTZ00404 cytochrome P450; Prov 100.0 2E-28 4.4E-33 212.9 24.5 223 28-259 26-274 (482)
8 PLN02183 ferulate 5-hydroxylas 100.0 3E-28 6.6E-33 213.2 24.6 219 30-258 35-282 (516)
9 PLN02966 cytochrome P450 83A1 100.0 2.2E-27 4.8E-32 207.2 24.4 224 29-259 27-277 (502)
10 PLN00168 Cytochrome P450; Prov 100.0 3.6E-27 7.7E-32 206.6 25.6 224 28-258 32-293 (519)
11 PLN02290 cytokinin trans-hydro 100.0 5E-28 1.1E-32 212.1 19.4 220 27-258 38-302 (516)
12 KOG0158 Cytochrome P450 CYP3/C 100.0 4.8E-27 1.1E-31 198.8 22.9 223 28-260 28-279 (499)
13 PLN02655 ent-kaurene oxidase 100.0 1.1E-26 2.5E-31 201.0 23.6 220 33-258 1-255 (466)
14 PLN02394 trans-cinnamate 4-mon 99.9 2.1E-25 4.6E-30 195.0 25.7 153 29-187 28-197 (503)
15 PLN03018 homomethionine N-hydr 99.9 8.1E-25 1.7E-29 191.6 26.5 151 29-185 38-206 (534)
16 PLN02500 cytochrome P450 90B1 99.9 5E-26 1.1E-30 198.2 18.5 210 28-258 35-273 (490)
17 PF00067 p450: Cytochrome P450 99.9 1.4E-25 2.9E-30 193.5 17.3 216 33-258 1-249 (463)
18 PLN02169 fatty acid (omega-1)- 99.9 6.9E-25 1.5E-29 191.0 20.4 217 30-258 30-287 (500)
19 PLN02196 abscisic acid 8'-hydr 99.9 1.7E-24 3.7E-29 187.2 22.4 208 27-257 31-256 (463)
20 PLN02774 brassinosteroid-6-oxi 99.9 2.2E-24 4.8E-29 186.6 19.5 208 29-258 29-254 (463)
21 KOG0157 Cytochrome P450 CYP4/C 99.9 2.1E-24 4.5E-29 187.3 17.5 202 29-242 33-255 (497)
22 PLN03195 fatty acid omega-hydr 99.9 8.3E-24 1.8E-28 185.4 21.0 218 32-259 31-282 (516)
23 PLN02302 ent-kaurenoic acid ox 99.9 7.7E-23 1.7E-27 178.5 23.1 212 27-260 38-278 (490)
24 PLN02936 epsilon-ring hydroxyl 99.9 4.4E-23 9.6E-28 179.5 18.8 219 31-258 12-271 (489)
25 PLN02987 Cytochrome P450, fami 99.9 1.7E-22 3.6E-27 174.8 21.4 209 27-258 26-260 (472)
26 PLN03141 3-epi-6-deoxocathaste 99.9 2.2E-22 4.8E-27 173.7 17.6 209 28-258 4-243 (452)
27 KOG0159 Cytochrome P450 CYP11/ 99.9 5.9E-22 1.3E-26 165.3 18.0 201 30-242 49-283 (519)
28 PLN02738 carotene beta-ring hy 99.9 1.3E-21 2.9E-26 173.7 21.2 131 47-185 154-291 (633)
29 PLN02426 cytochrome P450, fami 99.8 3.8E-19 8.2E-24 155.1 20.8 201 47-259 63-289 (502)
30 PLN02648 allene oxide synthase 99.8 1.2E-19 2.7E-24 156.4 10.4 148 29-185 15-194 (480)
31 KOG0684 Cytochrome P450 [Secon 99.7 2.6E-15 5.7E-20 123.3 17.8 210 31-256 31-261 (486)
32 COG2124 CypX Cytochrome P450 [ 99.5 3.6E-12 7.7E-17 108.7 16.3 187 49-262 27-229 (411)
33 KOG0114 Predicted RNA-binding 86.2 3.2 7E-05 27.9 5.3 63 29-91 10-76 (124)
34 KOG3653 Transforming growth fa 50.1 71 0.0015 28.2 6.5 55 38-98 203-258 (534)
35 cd01646 RT_Bac_retron_I RT_Bac 36.7 79 0.0017 23.0 4.4 57 28-90 50-107 (158)
36 PRK12333 nucleoside triphospha 35.7 2.1E+02 0.0045 22.2 7.0 49 133-185 26-74 (204)
37 PF13625 Helicase_C_3: Helicas 33.8 1.2E+02 0.0026 21.2 4.9 37 47-91 77-113 (129)
38 PHA03049 IMV membrane protein; 29.9 1.4E+02 0.003 18.3 5.6 15 30-44 30-44 (68)
39 PF00076 RRM_1: RNA recognitio 28.9 1.3E+02 0.0027 17.6 5.4 50 42-91 3-58 (70)
40 PLN03134 glycine-rich RNA-bind 28.7 2E+02 0.0044 20.6 5.4 46 40-91 37-95 (144)
41 PLN03120 nucleic acid binding 27.7 2.9E+02 0.0062 22.3 6.3 59 41-99 8-70 (260)
42 PF13893 RRM_5: RNA recognitio 27.1 1.3E+02 0.0028 17.1 4.0 38 51-90 2-39 (56)
43 TIGR01661 ELAV_HUD_SF ELAV/HuD 26.8 1.5E+02 0.0033 24.7 5.1 52 40-91 272-330 (352)
44 smart00362 RRM_2 RNA recogniti 25.6 1.4E+02 0.0031 17.1 5.3 45 47-91 13-58 (72)
45 PF14259 RRM_6: RNA recognitio 22.1 1.3E+02 0.0027 17.9 2.9 47 47-93 12-60 (70)
46 KOG3718 Carnitine O-acyltransf 20.5 3.1E+02 0.0068 24.4 5.6 55 74-132 208-264 (609)
47 smart00360 RRM RNA recognition 20.2 1.8E+02 0.004 16.4 4.7 45 47-91 10-57 (71)
48 TIGR03838 queuosine_YadB gluta 20.1 1E+02 0.0023 25.0 2.7 55 30-91 3-58 (272)
No 1
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.7e-35 Score=250.64 Aligned_cols=226 Identities=29% Similarity=0.474 Sum_probs=195.7
Q ss_pred CCCCCCCCCCccccccc-------hHHHHHHHHhcCCcEEEecCccccCCceEEEEeCCHHHHHHHHHHcCccccCC---
Q 048119 30 KHLPPGLRPYPVIGNLL-------HKSLAKLAKIHGPIMNLRLGVRLSFNLVTTVVVSSPSTAKAILKEHDSLFCDR--- 99 (266)
Q Consensus 30 ~~~ppgp~~~p~~G~~~-------~~~~~~~~~~yG~i~~~~~~~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~--- 99 (266)
.+.||||+++|++||++ +..+.+++++|||++.+++|. .++|+|+|+++++|++++++..|++|
T Consensus 25 ~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~------~~~Vviss~~~akE~l~~~d~~fa~Rp~~ 98 (489)
T KOG0156|consen 25 RNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGS------VPVVVISSYEAAKEVLVKQDLEFADRPDP 98 (489)
T ss_pred CCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecC------ceEEEECCHHHHHHHHHhCCccccCCCCc
Confidence 88899999999999998 789999999999999999999 99999999999999999999999888
Q ss_pred -------CCCCCcccccCCChhHHHHHHHHHhhhcchhhhhhhHHHHHHHHHHHHHHHHHhhhCCccccHHHHHHHHHHH
Q 048119 100 -------KHHEFSLVWLPVSTLWRSYRKMCNMHIFNRQKLDASQDLRHKKIKDLLTYVEENCRAGKAIDFGQAAFNTSIN 172 (266)
Q Consensus 100 -------~~~~~~l~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~ 172 (266)
..++.|++++++|+.|+.+||.+...+|+...+++......++++.+++.+.+ .+.++++|+.+.+..++.+
T Consensus 99 ~~~~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~-~~~~~~vdl~~~l~~~~~n 177 (489)
T KOG0156|consen 99 TATLKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSK-SKKGEPVDLSELLDLLVGN 177 (489)
T ss_pred hhhHHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh-cCCCceeeHHHHHHHHHHH
Confidence 23678999998899999999999999999999999888889999999999987 3233789999999999999
Q ss_pred HHHHHHhcCCccCcc---HHHHHHHHHHHHHHhCCCCccchhc-ccccCC-CcchHHHHHHHHHHHHHHHhhhhhcC---
Q 048119 173 LLPNTIFSIDLVHPN---ERKFKDTVWGMMEEAGKPNLSDHFP-LLKKLD-LQGTRHRNTLYAGEMFEVQEHGCSIS--- 244 (266)
Q Consensus 173 vi~~~~fG~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~l~-~~~~~~~~~~~~~~~~~~~~~~i~~~--- 244 (266)
||++++||.+++..+ ..++.+.+.+..+..+.+.+.+++| ++++++ ..+..++.....+++.+++++.|+++
T Consensus 178 vI~~~~fG~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~ 257 (489)
T KOG0156|consen 178 VICRMLFGRRFEEEDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREK 257 (489)
T ss_pred HHHHHHhCCccccCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999998743 3458888999999998888899999 677776 33566677777777888888888754
Q ss_pred ---CCCCCHHHHHHhcccccC
Q 048119 245 ---IKSKDMLDTVLNIIQDKS 262 (266)
Q Consensus 245 ---~~~~d~l~~ll~~~~~~~ 262 (266)
++.+|++|.||+..++++
T Consensus 258 ~~~~~~~D~vD~lL~~~~~~~ 278 (489)
T KOG0156|consen 258 IGDEEGRDFVDALLKLMKEEK 278 (489)
T ss_pred hccCCCCcHHHHHHHhhcccc
Confidence 223799999999865443
No 2
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00 E-value=1.1e-30 Score=228.61 Aligned_cols=240 Identities=30% Similarity=0.515 Sum_probs=178.6
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCCCCccccccc------hHHHHHHHHhcCCcEEEecCccccCCceEEEEeCCHHHHH
Q 048119 13 FTLFCVMASSFNSGGRRKHLPPGLRPYPVIGNLL------HKSLAKLAKIHGPIMNLRLGVRLSFNLVTTVVVSSPSTAK 86 (266)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~ppgp~~~p~~G~~~------~~~~~~~~~~yG~i~~~~~~~~~~~~~~~~v~v~dp~~~~ 86 (266)
++.++++.++....++..+.||||+++|++||+. +..+.+|+++||+++++++|+ .++|+++||++++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~------~~~vvv~~p~~~~ 89 (517)
T PLN02687 16 VLVWCLLLRRGGSGKHKRPLPPGPRGWPVLGNLPQLGPKPHHTMAALAKTYGPLFRLRFGF------VDVVVAASASVAA 89 (517)
T ss_pred HHHHHHHhccccCCCCCCCCCccCCCCCccccHHhcCCchhHHHHHHHHHhCCeeEEecCC------ceEEEeCCHHHHH
Confidence 3444444444455455667899999999999986 678899999999999999999 9999999999999
Q ss_pred HHHHHcCccccCC---------CCCCCcccccCCChhHHHHHHHHHhhhcchhhhhhhHHHHHHHHHHHHHHHHHhhhCC
Q 048119 87 AILKEHDSLFCDR---------KHHEFSLVWLPVSTLWRSYRKMCNMHIFNRQKLDASQDLRHKKIKDLLTYVEENCRAG 157 (266)
Q Consensus 87 ~i~~~~~~~~~~~---------~~~~~~l~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~ 157 (266)
+++.++...|.++ ...+.+++++.+|+.|+++||.+++++|+.++++.+.+.+.++++++++.|.+.. ++
T Consensus 90 ~il~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~-~~ 168 (517)
T PLN02687 90 QFLRTHDANFSNRPPNSGAEHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQH-GT 168 (517)
T ss_pred HHHHhcchhhhcCCCccchhhhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhc-CC
Confidence 9999877777765 1113455566569999999999984459999999999999999999999997643 45
Q ss_pred ccccHHHHHHHHHHHHHHHHHhcCCccCcc----HHHHHHHHHHHHHHhCCCCccchhcccccCCCcchHHHHHHHHHHH
Q 048119 158 KAIDFGQAAFNTSINLLPNTIFSIDLVHPN----ERKFKDTVWGMMEEAGKPNLSDHFPLLKKLDLQGTRHRNTLYAGEM 233 (266)
Q Consensus 158 ~~~d~~~~~~~~~~~vi~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~ 233 (266)
+++|+.+.++.+++|+++.++||.++...+ ...+.+.+..+........+...+|++.|++..+..++..+..+.+
T Consensus 169 ~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~ 248 (517)
T PLN02687 169 APVNLGQLVNVCTTNALGRAMVGRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRF 248 (517)
T ss_pred CceeHHHHHHHHHHHHHHHHHhCccccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHH
Confidence 689999999999999999999999874321 2455666665555443323335667666654333334555556666
Q ss_pred HHHHhhhhhcC--------CCCCCHHHHHHhccc
Q 048119 234 FEVQEHGCSIS--------IKSKDMLDTVLNIIQ 259 (266)
Q Consensus 234 ~~~~~~~i~~~--------~~~~d~l~~ll~~~~ 259 (266)
.+++.+.++++ ...+|+++.|++..+
T Consensus 249 ~~~~~~~i~~r~~~~~~~~~~~~d~l~~ll~~~~ 282 (517)
T PLN02687 249 DAMMNGIIEEHKAAGQTGSEEHKDLLSTLLALKR 282 (517)
T ss_pred HHHHHHHHHHHHHhccccCcccccHHHHHHHhhc
Confidence 66666665521 234699999998653
No 3
>PLN03234 cytochrome P450 83B1; Provisional
Probab=99.97 E-value=2.2e-29 Score=219.88 Aligned_cols=225 Identities=23% Similarity=0.374 Sum_probs=169.9
Q ss_pred CCCCCCCCCCCccccccc-------hHHHHHHHHhcCCcEEEecCccccCCceEEEEeCCHHHHHHHHHHcCccccCC--
Q 048119 29 RKHLPPGLRPYPVIGNLL-------HKSLAKLAKIHGPIMNLRLGVRLSFNLVTTVVVSSPSTAKAILKEHDSLFCDR-- 99 (266)
Q Consensus 29 ~~~~ppgp~~~p~~G~~~-------~~~~~~~~~~yG~i~~~~~~~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~-- 99 (266)
+.+.||||+++|++||+. +.++.+++++||+++++++|+ .++|+++|||++++|+.++...|.++
T Consensus 26 ~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~------~~~vvv~dpe~~~~il~~~~~~f~~r~~ 99 (499)
T PLN03234 26 SLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGG------RRLAVISSAELAKELLKTQDLNFTARPL 99 (499)
T ss_pred CCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecC------cCEEEECCHHHHHHHHHhCCccccCCCC
Confidence 367899999999999986 568899999999999999999 99999999999999999877677665
Q ss_pred -------CCCCCcccccCCChhHHHHHHHHHhhhcchhhhhhhHHHHHHHHHHHHHHHHHhhhCCccccHHHHHHHHHHH
Q 048119 100 -------KHHEFSLVWLPVSTLWRSYRKMCNMHIFNRQKLDASQDLRHKKIKDLLTYVEENCRAGKAIDFGQAAFNTSIN 172 (266)
Q Consensus 100 -------~~~~~~l~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~ 172 (266)
...+.++.+..+++.|+++||.+..++|+.++++.+.+.+.++++++++.|.+.+++++++|+.+.+..+++|
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~~t~d 179 (499)
T PLN03234 100 LKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFTNC 179 (499)
T ss_pred chhhhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHHHHHHHHHHH
Confidence 1123444455568999999998654569999999999999999999999998765556789999999999999
Q ss_pred HHHHHHhcCCccCcc--HHHHHHHHHHHHHHhCCCCccchhcccccCC-CcchHHHHHHHHHHHHHHHhhhhhcC-----
Q 048119 173 LLPNTIFSIDLVHPN--ERKFKDTVWGMMEEAGKPNLSDHFPLLKKLD-LQGTRHRNTLYAGEMFEVQEHGCSIS----- 244 (266)
Q Consensus 173 vi~~~~fG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~-~~~~~~~~~~~~~~~~~~~~~~i~~~----- 244 (266)
++++++||.+++..+ ..++.+.+.+.............+|++.+++ +.+..++..++.+.+.+++.+.|++.
T Consensus 180 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 259 (499)
T PLN03234 180 VVCRQAFGKRYNEYGTEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPNR 259 (499)
T ss_pred HHHHHHhCCcccccchhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 999999999987653 2334444444433333222334456544332 22334566777778777777777631
Q ss_pred --CCCCCHHHHHHhccc
Q 048119 245 --IKSKDMLDTVLNIIQ 259 (266)
Q Consensus 245 --~~~~d~l~~ll~~~~ 259 (266)
.+.+|+++.|++..+
T Consensus 260 ~~~~~~d~l~~l~~~~~ 276 (499)
T PLN03234 260 PKQETESFIDLLMQIYK 276 (499)
T ss_pred cCCCcccHHHHHHHHhh
Confidence 235799999997643
No 4
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=99.97 E-value=3.1e-29 Score=218.56 Aligned_cols=242 Identities=26% Similarity=0.408 Sum_probs=176.9
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCCCCCCCCccccccc------hHHHHHHHHhcCCcEEEecCccccCCceEEEEeCCH
Q 048119 9 LWLVFTLFCVMASSFNSGGRRKHLPPGLRPYPVIGNLL------HKSLAKLAKIHGPIMNLRLGVRLSFNLVTTVVVSSP 82 (266)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~p~~G~~~------~~~~~~~~~~yG~i~~~~~~~~~~~~~~~~v~v~dp 82 (266)
.++.++.+++.++.... ++.+.||||+++|++|+++ +.++.+++++||+++++++|+ +++|+++||
T Consensus 11 ~~~~~~~~~~~~~~~~~--~~~~~pPgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~------~~~vvv~dp 82 (504)
T PLN00110 11 TLLFFITRFFIRSLLPK--PSRKLPPGPRGWPLLGALPLLGNMPHVALAKMAKRYGPVMFLKMGT------NSMVVASTP 82 (504)
T ss_pred HHHHHHHHHHHHHHhhc--ccCCCcccCCCCCeeechhhcCCchHHHHHHHHHHhCCeEEEEcCC------ccEEEECCH
Confidence 33334444444443332 3467899999999999976 678899999999999999999 999999999
Q ss_pred HHHHHHHHHcCccccCC---------CCCCCcccccCCChhHHHHHHHHHhhhcchhhhhhhHHHHHHHHHHHHHHHHHh
Q 048119 83 STAKAILKEHDSLFCDR---------KHHEFSLVWLPVSTLWRSYRKMCNMHIFNRQKLDASQDLRHKKIKDLLTYVEEN 153 (266)
Q Consensus 83 ~~~~~i~~~~~~~~~~~---------~~~~~~l~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~ 153 (266)
+++++++.++...|.++ ..++.+.+++.+|+.|+++||.++++.|+.++++.+.+.+.+++..+++.+.+.
T Consensus 83 e~~~~vl~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~ 162 (504)
T PLN00110 83 EAARAFLKTLDINFSNRPPNAGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLEL 162 (504)
T ss_pred HHHHHHHHhcchhhcCCCCccchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHh
Confidence 99999999877677765 112233444456999999999999767999999999999999999999999765
Q ss_pred hhCCccccHHHHHHHHHHHHHHHHHhcCCcc-Ccc--HHHHHHHHHHHHHHhCCCCccchhcccccCCCcchHHHHHHHH
Q 048119 154 CRAGKAIDFGQAAFNTSINLLPNTIFSIDLV-HPN--ERKFKDTVWGMMEEAGKPNLSDHFPLLKKLDLQGTRHRNTLYA 230 (266)
Q Consensus 154 ~~~~~~~d~~~~~~~~~~~vi~~~~fG~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~ 230 (266)
..+|+++|+.+++..+++|+|+.++||.++. ..+ .+++.+.+...........+.+.+|++.|++..+..++..+..
T Consensus 163 ~~~g~~~~~~~~~~~~~~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~ 242 (504)
T PLN00110 163 SQRGEPVVVPEMLTFSMANMIGQVILSRRVFETKGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLH 242 (504)
T ss_pred ccCCCcEeHHHHHHHHHHHHHHHHHhCCcccccCchhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHH
Confidence 4456789999999999999999999999862 211 2456666666655443333345667666654333334555556
Q ss_pred HHHHHHHhhhhhcC-------CCCCCHHHHHHhcc
Q 048119 231 GEMFEVQEHGCSIS-------IKSKDMLDTVLNII 258 (266)
Q Consensus 231 ~~~~~~~~~~i~~~-------~~~~d~l~~ll~~~ 258 (266)
+.+.+++.+.+++. ...+|+++.+++..
T Consensus 243 ~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~ 277 (504)
T PLN00110 243 KKFDKLLTRMIEEHTASAHERKGNPDFLDVVMANQ 277 (504)
T ss_pred HHHHHHHHHHHHHHHhhccccccCCChhhHHhhcc
Confidence 66666655555411 23469999999764
No 5
>PLN03112 cytochrome P450 family protein; Provisional
Probab=99.97 E-value=8.3e-29 Score=216.91 Aligned_cols=235 Identities=23% Similarity=0.395 Sum_probs=171.3
Q ss_pred HHhhccCCCCCCCCCCCCCCCccccccc------hHHHHHHHHhcCCcEEEecCccccCCceEEEEeCCHHHHHHHHHHc
Q 048119 19 MASSFNSGGRRKHLPPGLRPYPVIGNLL------HKSLAKLAKIHGPIMNLRLGVRLSFNLVTTVVVSSPSTAKAILKEH 92 (266)
Q Consensus 19 ~~~~~~~~~~~~~~ppgp~~~p~~G~~~------~~~~~~~~~~yG~i~~~~~~~~~~~~~~~~v~v~dp~~~~~i~~~~ 92 (266)
++..+.+..++.+.||||+++|++||+. +.++.+++++||+++++++++ .+.++++||+++++++.++
T Consensus 20 ~~~~~~~~~~~~~~ppgp~~~pl~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~------~~~v~v~dpe~~~~vl~~~ 93 (514)
T PLN03112 20 WRWLNASMRKSLRLPPGPPRWPIVGNLLQLGPLPHRDLASLCKKYGPLVYLRLGS------VDAITTDDPELIREILLRQ 93 (514)
T ss_pred HHHccccccCCCCCccCCCCCCeeeeHHhcCCchHHHHHHHHHHhCCeEEEEecC------ccEEEECCHHHHHHHHHhC
Confidence 3333344445678899999999999986 667899999999999999999 9999999999999999887
Q ss_pred CccccCC--------CCCCC-cccccCCChhHHHHHHHHHhhhcchhhhhhhHHHHHHHHHHHHHHHHHhhhCCccccHH
Q 048119 93 DSLFCDR--------KHHEF-SLVWLPVSTLWRSYRKMCNMHIFNRQKLDASQDLRHKKIKDLLTYVEENCRAGKAIDFG 163 (266)
Q Consensus 93 ~~~~~~~--------~~~~~-~l~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~ 163 (266)
...|.++ ...|. +.++..+|+.|+++||.+.+++|+.++++.+.+.+.++++.+++.+.+....++++|+.
T Consensus 94 ~~~f~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~~~~~vd~~ 173 (514)
T PLN03112 94 DDVFASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQTGKPVNLR 173 (514)
T ss_pred CcccccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhccCCeeeHH
Confidence 7777765 11122 23344469999999999765669999999999999999999999876644456689999
Q ss_pred HHHHHHHHHHHHHHHhcCCccCcc------HHHHHHHHHHHHHHhCCCCccchhcccccCCCcchHHHHHHHHHHHHHHH
Q 048119 164 QAAFNTSINLLPNTIFSIDLVHPN------ERKFKDTVWGMMEEAGKPNLSDHFPLLKKLDLQGTRHRNTLYAGEMFEVQ 237 (266)
Q Consensus 164 ~~~~~~~~~vi~~~~fG~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~ 237 (266)
+.++++++|+++.++||.++.... ..++.+.+..+............+|.+.+++..+..++..+..+.+.+++
T Consensus 174 ~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (514)
T PLN03112 174 EVLGAFSMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEKRVDEFH 253 (514)
T ss_pred HHHHHHHHHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHHHHHHHHH
Confidence 999999999999999999874211 23455555555443322233445676665532233355555666666666
Q ss_pred hhhhhc----------CCCCCCHHHHHHhccc
Q 048119 238 EHGCSI----------SIKSKDMLDTVLNIIQ 259 (266)
Q Consensus 238 ~~~i~~----------~~~~~d~l~~ll~~~~ 259 (266)
++.+++ ..+..|+++.++++.+
T Consensus 254 ~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~ 285 (514)
T PLN03112 254 DKIIDEHRRARSGKLPGGKDMDFVDVLLSLPG 285 (514)
T ss_pred HHHHHHHHHhhcccccCCccchHHHHHHHhhc
Confidence 655541 1233599999998643
No 6
>PLN02971 tryptophan N-hydroxylase
Probab=99.97 E-value=1.2e-28 Score=216.64 Aligned_cols=226 Identities=22% Similarity=0.305 Sum_probs=161.9
Q ss_pred CCCCCCCCCCCCccccccc--------hHHHHHHHHhcC-CcEEEecCccccCCceEEEEeCCHHHHHHHHHHcCccccC
Q 048119 28 RRKHLPPGLRPYPVIGNLL--------HKSLAKLAKIHG-PIMNLRLGVRLSFNLVTTVVVSSPSTAKAILKEHDSLFCD 98 (266)
Q Consensus 28 ~~~~~ppgp~~~p~~G~~~--------~~~~~~~~~~yG-~i~~~~~~~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~ 98 (266)
++.+.||||+++|++||++ +.++.+|.++|| +++++++|+ .++|+++||+++++++.+++..|.+
T Consensus 54 r~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~------~~~vvv~dpe~ikevl~~~~~~f~~ 127 (543)
T PLN02971 54 KLHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGN------THVIPVTCPKIAREIFKQQDALFAS 127 (543)
T ss_pred CCCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCC------cceEEECCHHHHHHHHHhcchhhcC
Confidence 4567899999999999986 346789999999 899999999 9999999999999999988877877
Q ss_pred C------CCCCCc---ccccCCChhHHHHHHHHHhhhcchhhhhhhHHHHHHHHHHHHHHHHHhhhCCccccHHHHHHHH
Q 048119 99 R------KHHEFS---LVWLPVSTLWRSYRKMCNMHIFNRQKLDASQDLRHKKIKDLLTYVEENCRAGKAIDFGQAAFNT 169 (266)
Q Consensus 99 ~------~~~~~~---l~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~ 169 (266)
| ...+.+ +++..+|+.|+++||++++++|+...++.+.+.+.++++.+++.+.+...+++++|+.+.++++
T Consensus 128 rp~~~~~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~ 207 (543)
T PLN02971 128 RPLTYAQKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHY 207 (543)
T ss_pred CCcccchhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHH
Confidence 7 112333 3455569999999999987777776777889999999999998887654455689999999999
Q ss_pred HHHHHHHHHhcCCccCc-----c--HHHHHHHHHHHHHHhC---CCCccchhcccccCCCcchHHHHHHHHHHHHHHHhh
Q 048119 170 SINLLPNTIFSIDLVHP-----N--ERKFKDTVWGMMEEAG---KPNLSDHFPLLKKLDLQGTRHRNTLYAGEMFEVQEH 239 (266)
Q Consensus 170 ~~~vi~~~~fG~~~~~~-----~--~~~~~~~~~~~~~~~~---~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~ 239 (266)
++|++++++||.++... + ..+..+.+..+..... ...+.+.+|++++++..+..+...+..+.+.+++.+
T Consensus 208 t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (543)
T PLN02971 208 CGNAIKRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDP 287 (543)
T ss_pred HHHHHHHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHH
Confidence 99999999999987321 1 1122333444333221 112345667666654333344444455555555554
Q ss_pred hhhc-------CC--CCCCHHHHHHhccc
Q 048119 240 GCSI-------SI--KSKDMLDTVLNIIQ 259 (266)
Q Consensus 240 ~i~~-------~~--~~~d~l~~ll~~~~ 259 (266)
.|++ +. ..+|+++.|++..+
T Consensus 288 ~i~~~~~~~~~~~~~~~~d~l~~ll~~~~ 316 (543)
T PLN02971 288 IIDERIKMWREGKRTQIEDFLDIFISIKD 316 (543)
T ss_pred HHHHHHHHHhccCCCCCcCHHHHHHhhhc
Confidence 4431 11 24699999998643
No 7
>PTZ00404 cytochrome P450; Provisional
Probab=99.97 E-value=2e-28 Score=212.90 Aligned_cols=223 Identities=17% Similarity=0.255 Sum_probs=165.8
Q ss_pred CCCCCCCCCCCCccccccc------hHHHHHHHHhcCCcEEEecCccccCCceEEEEeCCHHHHHHHHHHcCccccCC--
Q 048119 28 RRKHLPPGLRPYPVIGNLL------HKSLAKLAKIHGPIMNLRLGVRLSFNLVTTVVVSSPSTAKAILKEHDSLFCDR-- 99 (266)
Q Consensus 28 ~~~~~ppgp~~~p~~G~~~------~~~~~~~~~~yG~i~~~~~~~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~-- 99 (266)
...+.+|||+++|++||+. +..+.+++++|||++++++|+ .++|+++||+++++++.++...|.++
T Consensus 26 ~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~------~~~v~i~~p~~~~~il~~~~~~~~~r~~ 99 (482)
T PTZ00404 26 IHKNELKGPIPIPILGNLHQLGNLPHRDLTKMSKKYGGIFRIWFAD------LYTVVLSDPILIREMFVDNFDNFSDRPK 99 (482)
T ss_pred ccCCCCCCCCCCCeeccHhhhcccHHHHHHHHHHHhCCeeEEEecC------CCEEEECCHHHHHHHHHhcchhhcCCCC
Confidence 4477789999999999986 778899999999999999999 99999999999999998766556544
Q ss_pred ------CCCCCcccccCCChhHHHHHHHHHhhhcchhhhhhhHHHHHHHHHHHHHHHHHhhhCCccccHHHHHHHHHHHH
Q 048119 100 ------KHHEFSLVWLPVSTLWRSYRKMCNMHIFNRQKLDASQDLRHKKIKDLLTYVEENCRAGKAIDFGQAAFNTSINL 173 (266)
Q Consensus 100 ------~~~~~~l~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~v 173 (266)
...+.|+++. +|+.|+++||+++++ |+.++++.+.+.+.+.++++++.|.+.++.++++|+.+.+.++++|+
T Consensus 100 ~~~~~~~~~~~~l~~~-~g~~w~~~Rk~~~~~-f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dv 177 (482)
T PTZ00404 100 IPSIKHGTFYHGIVTS-SGEYWKRNREIVGKA-MRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMSA 177 (482)
T ss_pred cceeeeeccCCceecc-ChHHHHHHHHHHHHH-HhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHH
Confidence 1136777777 499999999999976 89999999999999999999999987554566799999999999999
Q ss_pred HHHHHhcCCccCcc------HHHHHHHHHHHHHHhCCCCccchhcccccCCCcchHHHHHHHHHHHHHHHhhhhhc----
Q 048119 174 LPNTIFSIDLVHPN------ERKFKDTVWGMMEEAGKPNLSDHFPLLKKLDLQGTRHRNTLYAGEMFEVQEHGCSI---- 243 (266)
Q Consensus 174 i~~~~fG~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~---- 243 (266)
++.++||.+++..+ ...+.+.+..++...........++++..+ +..+.....+..+.+.+++++++++
T Consensus 178 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 256 (482)
T PTZ00404 178 MFKYIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPL-YYQYLEHTDKNFKKIKKFIKEKYHEHLKT 256 (482)
T ss_pred HHHHHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999886432 134455555555444332222223322211 1111223344566667777666652
Q ss_pred --CCCCCCHHHHHHhccc
Q 048119 244 --SIKSKDMLDTVLNIIQ 259 (266)
Q Consensus 244 --~~~~~d~l~~ll~~~~ 259 (266)
...++|+++.|+++.+
T Consensus 257 ~~~~~~~dll~~ll~~~~ 274 (482)
T PTZ00404 257 IDPEVPRDLLDLLIKEYG 274 (482)
T ss_pred cCCCCcccHHHHHHHHhc
Confidence 1235799999998753
No 8
>PLN02183 ferulate 5-hydroxylase
Probab=99.97 E-value=3e-28 Score=213.22 Aligned_cols=219 Identities=26% Similarity=0.469 Sum_probs=161.7
Q ss_pred CCCCCCCCCCccccccc------hHHHHHHHHhcCCcEEEecCccccCCceEEEEeCCHHHHHHHHHHcCccccCC----
Q 048119 30 KHLPPGLRPYPVIGNLL------HKSLAKLAKIHGPIMNLRLGVRLSFNLVTTVVVSSPSTAKAILKEHDSLFCDR---- 99 (266)
Q Consensus 30 ~~~ppgp~~~p~~G~~~------~~~~~~~~~~yG~i~~~~~~~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~---- 99 (266)
.+.||||+++|++|++. +.++.+|+++||++|++++|+ .++|+++||+++++++.+++..|.++
T Consensus 35 ~~~ppgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~------~~~vvv~dp~~i~~il~~~~~~f~~r~~~~ 108 (516)
T PLN02183 35 LPYPPGPKGLPIIGNMLMMDQLTHRGLANLAKQYGGLFHMRMGY------LHMVAVSSPEVARQVLQVQDSVFSNRPANI 108 (516)
T ss_pred CCCCcCCCCCCeeccHHhcCCcchHHHHHHHHHhCCeeEEEeCC------cceEEeCCHHHHHHHHHhhhhhhcCCCccc
Confidence 57899999999999976 567899999999999999999 99999999999999999876666655
Q ss_pred ----CC-CCCcccccCCChhHHHHHHHHHhhhcchhhhhhhHHHHHHHHHHHHHHHHHhhhCCccccHHHHHHHHHHHHH
Q 048119 100 ----KH-HEFSLVWLPVSTLWRSYRKMCNMHIFNRQKLDASQDLRHKKIKDLLTYVEENCRAGKAIDFGQAAFNTSINLL 174 (266)
Q Consensus 100 ----~~-~~~~l~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~vi 174 (266)
.. .+.+.+++.+|+.|+++||++..++|+.++++.+.+. .++++.+++.|.+. .++++|+.+.+.++++|++
T Consensus 109 ~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~-~~~~~~~~~~l~~~--~~~~v~~~~~~~~~~~~vi 185 (516)
T PLN02183 109 AISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASV-RDEVDSMVRSVSSN--IGKPVNIGELIFTLTRNIT 185 (516)
T ss_pred chhccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHH-HHHHHHHHHHHHhc--CCCcEeHHHHHHHHHHHHH
Confidence 11 1123344446999999999954355999999888886 46789999998653 4668999999999999999
Q ss_pred HHHHhcCCccCccHHHHHHHHHHHHHHhCCCCccchhcccccCCCcchHHHHHHHHHHHHHHHhhhhhc-------C---
Q 048119 175 PNTIFSIDLVHPNERKFKDTVWGMMEEAGKPNLSDHFPLLKKLDLQGTRHRNTLYAGEMFEVQEHGCSI-------S--- 244 (266)
Q Consensus 175 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~-------~--- 244 (266)
+.++||.+.+..+ +++.+.+..+............+|++.+++.....++..+..+.+.+++.+.|++ .
T Consensus 186 ~~~~fG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 264 (516)
T PLN02183 186 YRAAFGSSSNEGQ-DEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQNAD 264 (516)
T ss_pred HhHhhcCcccchH-HHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 9999999876544 5666666665554443334456676665532223445555566666555554431 1
Q ss_pred ----CCCCCHHHHHHhcc
Q 048119 245 ----IKSKDMLDTVLNII 258 (266)
Q Consensus 245 ----~~~~d~l~~ll~~~ 258 (266)
...+|+++.+++..
T Consensus 265 ~~~~~~~~d~l~~ll~~~ 282 (516)
T PLN02183 265 NDSEEAETDMVDDLLAFY 282 (516)
T ss_pred cccccccccHHHHHHHhh
Confidence 12368999999854
No 9
>PLN02966 cytochrome P450 83A1
Probab=99.96 E-value=2.2e-27 Score=207.22 Aligned_cols=224 Identities=27% Similarity=0.439 Sum_probs=158.7
Q ss_pred CCCCCCCCCCCccccccc-------hHHHHHHHHhcCCcEEEecCccccCCceEEEEeCCHHHHHHHHHHcCccccCC--
Q 048119 29 RKHLPPGLRPYPVIGNLL-------HKSLAKLAKIHGPIMNLRLGVRLSFNLVTTVVVSSPSTAKAILKEHDSLFCDR-- 99 (266)
Q Consensus 29 ~~~~ppgp~~~p~~G~~~-------~~~~~~~~~~yG~i~~~~~~~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~-- 99 (266)
..+.||||+++|++||+. +..+.+|+++||+++++++|+ .++|+++||+.+++|+.++...|.++
T Consensus 27 ~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~------~~~vvi~~p~~i~~vl~~~~~~~~~~~~ 100 (502)
T PLN02966 27 RYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGS------RTMVVISSAELAKELLKTQDVNFADRPP 100 (502)
T ss_pred CCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCC------CcEEEECCHHHHHHHHHhCcccccCCCC
Confidence 356799999999999986 568899999999999999999 99999999999999998877666544
Q ss_pred -------CCCCCcccccCCChhHHHHHHH-HHhhhcchhhhhhhHHHHHHHHHHHHHHHHHhhhCCccccHHHHHHHHHH
Q 048119 100 -------KHHEFSLVWLPVSTLWRSYRKM-CNMHIFNRQKLDASQDLRHKKIKDLLTYVEENCRAGKAIDFGQAAFNTSI 171 (266)
Q Consensus 100 -------~~~~~~l~~~~~g~~w~~~Rk~-~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~ 171 (266)
..+..++.+..+|+.|+++||. ++ +.|+.++++.+.+.+.++++++++.|.+.+..++++|+.+.+..+|+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t~ 179 (502)
T PLN02966 101 HRGHEFISYGRRDMALNHYTPYYREIRKMGMN-HLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTN 179 (502)
T ss_pred CccceeeccCcceeeeCCCCHHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHH
Confidence 1112233344459999999999 55 55999999999999999999999999876545668999999999999
Q ss_pred HHHHHHHhcCCccCcc--HHHHHHHHHHHHHHhCCCCccchhcccccCC-CcchHHHHHHHHHH----HHHHHhhhhhcC
Q 048119 172 NLLPNTIFSIDLVHPN--ERKFKDTVWGMMEEAGKPNLSDHFPLLKKLD-LQGTRHRNTLYAGE----MFEVQEHGCSIS 244 (266)
Q Consensus 172 ~vi~~~~fG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~-~~~~~~~~~~~~~~----~~~~~~~~i~~~ 244 (266)
|+++.++||.+++..+ ..++.+.+...........+...+|++.+++ +.+..+......+. +.+.+++.++++
T Consensus 180 dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 259 (502)
T PLN02966 180 SVVCRQAFGKKYNEDGEEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPK 259 (502)
T ss_pred HHHHHHHhCCccCccchHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999987544 1233333333333333322334455433222 12222222333333 444444443321
Q ss_pred ---CCCCCHHHHHHhccc
Q 048119 245 ---IKSKDMLDTVLNIIQ 259 (266)
Q Consensus 245 ---~~~~d~l~~ll~~~~ 259 (266)
.+..|+++.|++..+
T Consensus 260 ~~~~~~~~~l~~l~~~~~ 277 (502)
T PLN02966 260 RVKPETESMIDLLMEIYK 277 (502)
T ss_pred ccccccccHHHHHHHHHh
Confidence 234699999997654
No 10
>PLN00168 Cytochrome P450; Provisional
Probab=99.96 E-value=3.6e-27 Score=206.62 Aligned_cols=224 Identities=20% Similarity=0.243 Sum_probs=156.8
Q ss_pred CCCCCCCCCCCCccccccc---------hHHHHHHHHhcCCcEEEecCccccCCceEEEEeCCHHHHHHHHHHcCccccC
Q 048119 28 RRKHLPPGLRPYPVIGNLL---------HKSLAKLAKIHGPIMNLRLGVRLSFNLVTTVVVSSPSTAKAILKEHDSLFCD 98 (266)
Q Consensus 28 ~~~~~ppgp~~~p~~G~~~---------~~~~~~~~~~yG~i~~~~~~~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~ 98 (266)
+..+.||||+++|++||+. +..+.+++++||++|++++|+ .++|+++||+++++++.++...|.+
T Consensus 32 ~~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~------~~~vvv~dpe~~~~il~~~~~~f~~ 105 (519)
T PLN00168 32 KGRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGS------RLSVFVADRRLAHAALVERGAALAD 105 (519)
T ss_pred CCCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCC------ccEEEECCHHHHHHHHHhcCCcccc
Confidence 3457799999999999985 356789999999999999999 9999999999999999988777776
Q ss_pred CC------CCC--Ccccc-cCCChhHHHHHH-HHHhhhcchhhhhhhHHHHHHHHHHHHHHHHHhhhCCccccHHHHHHH
Q 048119 99 RK------HHE--FSLVW-LPVSTLWRSYRK-MCNMHIFNRQKLDASQDLRHKKIKDLLTYVEENCRAGKAIDFGQAAFN 168 (266)
Q Consensus 99 ~~------~~~--~~l~~-~~~g~~w~~~Rk-~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~ 168 (266)
+. ..| .+++. ..+|+.|+++|| +++ ++|+.++++.+.+.+.++++.+++.|.+.++.++.+|+.+.+..
T Consensus 106 rp~~~~~~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~-~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~ 184 (519)
T PLN00168 106 RPAVASSRLLGESDNTITRSSYGPVWRLLRRNLVA-ETLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAPRVVETFQY 184 (519)
T ss_pred CCcccchhhhccCCCceeCCCCCHHHHHHHHHHHH-hccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHH
Confidence 61 112 23333 346999999987 566 45999999999999999999999999875444456899999999
Q ss_pred HHHHHHHHHHhcCCccCccHHHHHHHHHHHHHHhC-CCCccchhcccccCCCcchHHHHHHHHHHHHHHHhhhhhcC---
Q 048119 169 TSINLLPNTIFSIDLVHPNERKFKDTVWGMMEEAG-KPNLSDHFPLLKKLDLQGTRHRNTLYAGEMFEVQEHGCSIS--- 244 (266)
Q Consensus 169 ~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~--- 244 (266)
+++++++.++||.+++......+......+..... ...+...+|.+.+....+..++..+..+.+.+++.+.|+++
T Consensus 185 ~~~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (519)
T PLN00168 185 AMFCLLVLMCFGERLDEPAVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDARREY 264 (519)
T ss_pred HHHHHHHHHHcCCCcChhhHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998864321233333332222221 12234455643322111222334445555555555444311
Q ss_pred -------C--------CCCCHHHHHHhcc
Q 048119 245 -------I--------KSKDMLDTVLNII 258 (266)
Q Consensus 245 -------~--------~~~d~l~~ll~~~ 258 (266)
. ..+|+++.|++..
T Consensus 265 ~~~~~~~~~~~~~~~~~~~d~l~~ll~~~ 293 (519)
T PLN00168 265 KNHLGQGGEPPKKETTFEHSYVDTLLDIR 293 (519)
T ss_pred hhhccccCccccccccccccHHHHHHhhh
Confidence 0 1458999999754
No 11
>PLN02290 cytokinin trans-hydroxylase
Probab=99.96 E-value=5e-28 Score=212.07 Aligned_cols=220 Identities=14% Similarity=0.172 Sum_probs=160.2
Q ss_pred CCCCCCCCCCCCCccccccc--hH-----------------------HHHHHHHhcCCcEEEecCccccCCceEEEEeCC
Q 048119 27 GRRKHLPPGLRPYPVIGNLL--HK-----------------------SLAKLAKIHGPIMNLRLGVRLSFNLVTTVVVSS 81 (266)
Q Consensus 27 ~~~~~~ppgp~~~p~~G~~~--~~-----------------------~~~~~~~~yG~i~~~~~~~~~~~~~~~~v~v~d 81 (266)
+...+.||||+++|++||++ .. .+.+|+++|||++++++|+ .++|+++|
T Consensus 38 ~~~~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~------~~~vvv~d 111 (516)
T PLN02290 38 IMERQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGT------EPRLCLTE 111 (516)
T ss_pred HHHHcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCC------ccEEEECC
Confidence 33466799999999999987 11 3577899999999999999 99999999
Q ss_pred HHHHHHHHHHcCccccCC---------CCCCCcccccCCChhHHHHHHHHHhhhcchhhhhhhHHHHHHHHHHHHHHHHH
Q 048119 82 PSTAKAILKEHDSLFCDR---------KHHEFSLVWLPVSTLWRSYRKMCNMHIFNRQKLDASQDLRHKKIKDLLTYVEE 152 (266)
Q Consensus 82 p~~~~~i~~~~~~~~~~~---------~~~~~~l~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~ 152 (266)
|+++++++.++.. +.++ ...|.|+++++ |+.|+++||.+++. |+.++++.+.+.+.++++++++.|.+
T Consensus 112 p~~v~~il~~~~~-~~~r~~~~~~~~~~~~g~~l~~~~-g~~Wk~~Rk~~~~~-f~~~~l~~~~~~i~~~~~~l~~~l~~ 188 (516)
T PLN02290 112 TELIKELLTKYNT-VTGKSWLQQQGTKHFIGRGLLMAN-GADWYHQRHIAAPA-FMGDRLKGYAGHMVECTKQMLQSLQK 188 (516)
T ss_pred HHHHHHHHhcCCC-CCCCcchhhhHHHHHhcCCccccC-chHHHHHHhhcccc-cCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999987633 3333 12366777775 99999999999966 99999999999999999999999987
Q ss_pred hhhCC-ccccHHHHHHHHHHHHHHHHHhcCCccCccHHHHHHHHHHHHHHhCCCCccchhcccccCCCcchHHHHHHHHH
Q 048119 153 NCRAG-KAIDFGQAAFNTSINLLPNTIFSIDLVHPNERKFKDTVWGMMEEAGKPNLSDHFPLLKKLDLQGTRHRNTLYAG 231 (266)
Q Consensus 153 ~~~~~-~~~d~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~ 231 (266)
..+.+ .++|+.+.++++++|++++++||.+++.. +++.+.+..+............+|+++++|. +..++..+..+
T Consensus 189 ~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p~-~~~~~~~~~~~ 265 (516)
T PLN02290 189 AVESGQTEVEIGEYMTRLTADIISRTEFDSSYEKG--KQIFHLLTVLQRLCAQATRHLCFPGSRFFPS-KYNREIKSLKG 265 (516)
T ss_pred HHhcCCceEEhHHHHHHHHHHHHHHHHcCCccccc--hHHHHHHHHHHHHHHHhhhhhcCchhhhCCC-hhHHHHHHHHH
Confidence 54433 47999999999999999999999988654 2333333333322111111123455555552 23344555666
Q ss_pred HHHHHHhhhhhcC----------CCCCCHHHHHHhcc
Q 048119 232 EMFEVQEHGCSIS----------IKSKDMLDTVLNII 258 (266)
Q Consensus 232 ~~~~~~~~~i~~~----------~~~~d~l~~ll~~~ 258 (266)
.+.+++++.|+++ ...+|+++.+++..
T Consensus 266 ~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~ 302 (516)
T PLN02290 266 EVERLLMEIIQSRRDCVEIGRSSSYGDDLLGMLLNEM 302 (516)
T ss_pred HHHHHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHhc
Confidence 6666666666421 12479999999854
No 12
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.96 E-value=4.8e-27 Score=198.82 Aligned_cols=223 Identities=18% Similarity=0.227 Sum_probs=155.2
Q ss_pred CCCCCCCCCCCCccccccc--------hHHHHHHHHhcCCcEEEecCccccCCceEEEEeCCHHHHHHHHHHcCccccC-
Q 048119 28 RRKHLPPGLRPYPVIGNLL--------HKSLAKLAKIHGPIMNLRLGVRLSFNLVTTVVVSSPSTAKAILKEHDSLFCD- 98 (266)
Q Consensus 28 ~~~~~ppgp~~~p~~G~~~--------~~~~~~~~~~yG~i~~~~~~~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~- 98 (266)
+.++..|+|+++|++||+. .....+...++||+++++.+. +|.++|+|||++++|+.++.++|.+
T Consensus 28 w~rrGi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~------~p~l~v~D~elik~I~ik~F~~F~~r 101 (499)
T KOG0158|consen 28 WRRRGIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGR------QPALLVSDPELIKEILIKDFDNFYNR 101 (499)
T ss_pred hccCCCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecC------CcceEecCHHHHHHHHHHhCccCcCC
Confidence 3455789999999999998 223333333448999999999 9999999999999999999999998
Q ss_pred -C--C------CCCCcccccCCChhHHHHHHHHHhhhcchhhhhhhHHHHHHHHHHHHHHHHHhhhCCccccHHHHHHHH
Q 048119 99 -R--K------HHEFSLVWLPVSTLWRSYRKMCNMHIFNRQKLDASQDLRHKKIKDLLTYVEENCRAGKAIDFGQAAFNT 169 (266)
Q Consensus 99 -~--~------~~~~~l~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~ 169 (266)
+ . ....++++. +|++||++|..++|. |+..+++.|.|.++++++++++.+.+....+..+++.+.+.++
T Consensus 102 ~~~~~~d~~~~l~~~~Lf~~-~g~~WK~lR~~lsP~-Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~~~~~dl~~~y 179 (499)
T KOG0158|consen 102 KRPIYGDPEDPLSALNLFFL-RGERWKRLRTKLSPT-FTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQEGEIKDLCARY 179 (499)
T ss_pred CCCCcCCCCCcccccCchhc-cCchHHHHHHhhccc-cchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCccHHHHHHHH
Confidence 4 1 112445555 599999999999966 9999999999999999999999999865433578888889999
Q ss_pred HHHHHHHHHhcCCccCcc--HHHHHHHHHHHHHH-hCCCC----ccchhcccccCCCcchHHHHHHHHHHHHHHHhhhhh
Q 048119 170 SINLLPNTIFSIDLVHPN--ERKFKDTVWGMMEE-AGKPN----LSDHFPLLKKLDLQGTRHRNTLYAGEMFEVQEHGCS 242 (266)
Q Consensus 170 ~~~vi~~~~fG~~~~~~~--~~~~~~~~~~~~~~-~~~~~----~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~ 242 (266)
|.|||++++||.+.++.. ...+.......... ..... ....+|.+.... .......+..+.+.+.+.+.++
T Consensus 180 T~DVI~~~AfG~~~~s~~d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l--~~~~~~~~~~~~~~~~v~~~v~ 257 (499)
T KOG0158|consen 180 TTDVIGSCAFGLDANSLRDPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPL--RVKLFPEDVTDFFRKLVNSRVE 257 (499)
T ss_pred HHHHHhHhhcccchhhhcCchHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhh--hcccChHHHHHHHHHHHHHHHH
Confidence 999999999999988764 33444433333332 11111 122233222110 0011122223333333333333
Q ss_pred ----cCCCCCCHHHHHHhcccc
Q 048119 243 ----ISIKSKDMLDTVLNIIQD 260 (266)
Q Consensus 243 ----~~~~~~d~l~~ll~~~~~ 260 (266)
++..++|++|+|++...+
T Consensus 258 ~R~~~~~~r~Dfi~lll~~~~~ 279 (499)
T KOG0158|consen 258 QREKENIERNDFIDLLLDARAS 279 (499)
T ss_pred HHHhcCCCCchHHHHHHHhhcc
Confidence 335788999999998743
No 13
>PLN02655 ent-kaurene oxidase
Probab=99.96 E-value=1.1e-26 Score=200.96 Aligned_cols=220 Identities=20% Similarity=0.217 Sum_probs=160.7
Q ss_pred CCCCCCCccccccc-------hHHHHHHHHhcCCcEEEecCccccCCceEEEEeCCHHHHHHHHHHcCccccCC------
Q 048119 33 PPGLRPYPVIGNLL-------HKSLAKLAKIHGPIMNLRLGVRLSFNLVTTVVVSSPSTAKAILKEHDSLFCDR------ 99 (266)
Q Consensus 33 ppgp~~~p~~G~~~-------~~~~~~~~~~yG~i~~~~~~~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~------ 99 (266)
||||+++|++||++ +.++.+|+++||+++++++|+ .++|+|+||+++++++.++...|.++
T Consensus 1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~------~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~ 74 (466)
T PLN02655 1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGA------SSVVVLNSTEVAKEAMVTKFSSISTRKLSKAL 74 (466)
T ss_pred CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECC------EeEEEeCCHHHHHHHHHhcCchhcCCChhhHH
Confidence 78999999999986 678999999999999999999 99999999999999999887777666
Q ss_pred -CCCC--CcccccCCChhHHHHHHHHHhhhcchhhhhhhHHHHHHHHHHHHHHHHHhhh--CCccccHHHHHHHHHHHHH
Q 048119 100 -KHHE--FSLVWLPVSTLWRSYRKMCNMHIFNRQKLDASQDLRHKKIKDLLTYVEENCR--AGKAIDFGQAAFNTSINLL 174 (266)
Q Consensus 100 -~~~~--~~l~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~--~~~~~d~~~~~~~~~~~vi 174 (266)
.+.| .++++.++|+.|+++||.+.+++|+...++.+.+.+.+.++.+++.+.+..+ .++++|+.+.++++|+|++
T Consensus 75 ~~~~~~~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi 154 (466)
T PLN02655 75 TVLTRDKSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLS 154 (466)
T ss_pred HHHhcCCCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHH
Confidence 1222 2344555699999999988878788888889999999999999999876533 3567999999999999999
Q ss_pred HHHHhcCCccCcc----H------HHHHHHHHHHHHHhCCCCccchhcccccCCCcchHHHHHHHHHHHHHHHhhhhh--
Q 048119 175 PNTIFSIDLVHPN----E------RKFKDTVWGMMEEAGKPNLSDHFPLLKKLDLQGTRHRNTLYAGEMFEVQEHGCS-- 242 (266)
Q Consensus 175 ~~~~fG~~~~~~~----~------~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~-- 242 (266)
+.++||.+++..+ . ..+...+..+........+.+.+|.++|+|.....+...+....+.+++++.++
T Consensus 155 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 234 (466)
T PLN02655 155 LIQALGEDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQ 234 (466)
T ss_pred HHHHhccccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999876532 0 123333444444433323445778777776432333333333333344444433
Q ss_pred --c---CCCCCCHHHHHHhcc
Q 048119 243 --I---SIKSKDMLDTVLNII 258 (266)
Q Consensus 243 --~---~~~~~d~l~~ll~~~ 258 (266)
+ ..++.|+++.+++..
T Consensus 235 ~~~~~~~~~~~d~l~~ll~~~ 255 (466)
T PLN02655 235 KKRIARGEERDCYLDFLLSEA 255 (466)
T ss_pred HHhhcCCCCcccHHHHHHhcc
Confidence 1 223468999999764
No 14
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=99.95 E-value=2.1e-25 Score=195.01 Aligned_cols=153 Identities=25% Similarity=0.387 Sum_probs=128.0
Q ss_pred CCCCCCCCCCCccccccc-------hHHHHHHHHhcCCcEEEecCccccCCceEEEEeCCHHHHHHHHHHcCccccCC--
Q 048119 29 RKHLPPGLRPYPVIGNLL-------HKSLAKLAKIHGPIMNLRLGVRLSFNLVTTVVVSSPSTAKAILKEHDSLFCDR-- 99 (266)
Q Consensus 29 ~~~~ppgp~~~p~~G~~~-------~~~~~~~~~~yG~i~~~~~~~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~-- 99 (266)
+.+.||||+++|++|++. +..+.+++++|||++++++|+ +++|+++||+.+++++.+++..|.++
T Consensus 28 ~~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~------~~~v~v~dpe~i~~il~~~~~~~~~r~~ 101 (503)
T PLN02394 28 KLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQ------RNLVVVSSPELAKEVLHTQGVEFGSRTR 101 (503)
T ss_pred cCCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCC------eeEEEeCCHHHHHHHHHhCCccccCCCC
Confidence 478899999999999986 568899999999999999999 99999999999999998776656543
Q ss_pred -----CC--CCCcccccCCChhHHHHHHHHHhhhcchhhhhhhHHHHHHHHHHHHHHHHHhhh-CCccccHHHHHHHHHH
Q 048119 100 -----KH--HEFSLVWLPVSTLWRSYRKMCNMHIFNRQKLDASQDLRHKKIKDLLTYVEENCR-AGKAIDFGQAAFNTSI 171 (266)
Q Consensus 100 -----~~--~~~~l~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~-~~~~~d~~~~~~~~~~ 171 (266)
.+ .+.+.+++.+|+.|+++||.+..+.|+.++++.+.+.+.++++++++.|.+..+ .++.+|+.+.++.+++
T Consensus 102 ~~~~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~ 181 (503)
T PLN02394 102 NVVFDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMY 181 (503)
T ss_pred cchHhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHH
Confidence 11 132344445699999999999745699989999999999999999999976542 2346899999999999
Q ss_pred HHHHHHHhcCCccCcc
Q 048119 172 NLLPNTIFSIDLVHPN 187 (266)
Q Consensus 172 ~vi~~~~fG~~~~~~~ 187 (266)
|+++.++||.+++..+
T Consensus 182 dvi~~~~fG~~~~~~~ 197 (503)
T PLN02394 182 NIMYRMMFDRRFESED 197 (503)
T ss_pred HHHHHHHhCCCccccc
Confidence 9999999999987543
No 15
>PLN03018 homomethionine N-hydroxylase
Probab=99.94 E-value=8.1e-25 Score=191.61 Aligned_cols=151 Identities=19% Similarity=0.292 Sum_probs=120.3
Q ss_pred CCCCCCCCCCCccccccc-h-------HHHHHHHHhc-CCcEEEecCccccCCceEEEEeCCHHHHHHHHHHcCccccCC
Q 048119 29 RKHLPPGLRPYPVIGNLL-H-------KSLAKLAKIH-GPIMNLRLGVRLSFNLVTTVVVSSPSTAKAILKEHDSLFCDR 99 (266)
Q Consensus 29 ~~~~ppgp~~~p~~G~~~-~-------~~~~~~~~~y-G~i~~~~~~~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~ 99 (266)
..+.||||+++|++||++ . .++.++.++| |+++++++|+ .++|+|+||+++++++.+++..|.+|
T Consensus 38 ~~~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~------~~~vvvsdpe~ikevl~~~~~~f~~r 111 (534)
T PLN03018 38 SRQLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAG------THTITINSDEIAREAFRERDADLADR 111 (534)
T ss_pred CCCCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCC------ccEEEECCHHHHHHHHHhCcHhhcCC
Confidence 345799999999999986 1 2355666665 7999999999 99999999999999999887778776
Q ss_pred C-------C--CCCcccccCCChhHHHHHHHHHhhhcchhhhhhhHHHHHHHHHHHHHHHHHhhhCCccccHHHHHHHHH
Q 048119 100 K-------H--HEFSLVWLPVSTLWRSYRKMCNMHIFNRQKLDASQDLRHKKIKDLLTYVEENCRAGKAIDFGQAAFNTS 170 (266)
Q Consensus 100 ~-------~--~~~~l~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~ 170 (266)
. . ++.++++..+|+.|+++||++++.+++....+.+.+.+.++++++++.+.+..+.++++|+.+.+++++
T Consensus 112 p~~~~~~~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t 191 (534)
T PLN03018 112 PQLSIMETIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYG 191 (534)
T ss_pred CCchhhhhhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHH
Confidence 1 2 123577766699999999999977445544445556666788999999976543456799999999999
Q ss_pred HHHHHHHHhcCCccC
Q 048119 171 INLLPNTIFSIDLVH 185 (266)
Q Consensus 171 ~~vi~~~~fG~~~~~ 185 (266)
+|++++++||.+++.
T Consensus 192 ~~vi~~~~fG~~~~~ 206 (534)
T PLN03018 192 YAVTMRMLFGRRHVT 206 (534)
T ss_pred HHHHHHHHhCCcccc
Confidence 999999999998753
No 16
>PLN02500 cytochrome P450 90B1
Probab=99.94 E-value=5e-26 Score=198.22 Aligned_cols=210 Identities=19% Similarity=0.235 Sum_probs=146.9
Q ss_pred CCCCCCCCCCCCccccccc-----------hHHHHHHHHhcCCcEEEecCccccCCceEEEEeCCHHHHHHHHHHcCccc
Q 048119 28 RRKHLPPGLRPYPVIGNLL-----------HKSLAKLAKIHGPIMNLRLGVRLSFNLVTTVVVSSPSTAKAILKEHDSLF 96 (266)
Q Consensus 28 ~~~~~ppgp~~~p~~G~~~-----------~~~~~~~~~~yG~i~~~~~~~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~ 96 (266)
++.+.||||+++|++||+. +.++.+++++||+++++++|+ +++|+++||+++++++.+++..|
T Consensus 35 ~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~------~~~vvv~~p~~~~~vl~~~~~~f 108 (490)
T PLN02500 35 KRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFG------EPTIVSADAGLNRFILQNEGRLF 108 (490)
T ss_pred CCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccC------CCeEEecCHHHHHHHHhCCCCeE
Confidence 4467899999999999864 245788899999999999999 99999999999999998876666
Q ss_pred cCC-------CCCCCcccccCCChhHHHHHHHHHhhhcchhhhhh-hHHHHHHHHHHHHHHHHHhhhCCccccHHHHHHH
Q 048119 97 CDR-------KHHEFSLVWLPVSTLWRSYRKMCNMHIFNRQKLDA-SQDLRHKKIKDLLTYVEENCRAGKAIDFGQAAFN 168 (266)
Q Consensus 97 ~~~-------~~~~~~l~~~~~g~~w~~~Rk~~~~~~f~~~~l~~-~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~ 168 (266)
.++ ..++.++++. +|+.|+++||++++. |+..+++. +.+.+.+.+..+++.|.+ ++.+|+.+.+++
T Consensus 109 ~~~~~~~~~~~~g~~~~~~~-~g~~wr~~Rk~~~~~-f~~~~l~~~~~~~~~~~~~~~~~~~~~----~~~vd~~~~~~~ 182 (490)
T PLN02500 109 ECSYPRSIGGILGKWSMLVL-VGDMHRDMRSISLNF-LSHARLRTHLLKEVERHTLLVLDSWKE----NSTFSAQDEAKK 182 (490)
T ss_pred EeeCchHHHHHhCccccccc-CCHHHHHHHHHHHHh-cChHHHHHHHHHHHHHHHHHHHHHhCC----CCCEEehHHHHH
Confidence 433 1223467767 499999999999955 88888876 567777777777777632 347899999999
Q ss_pred HHHHHHHHHHhcCCccCccHHHHHHHHHHHHHHhCCCCccchhcccccCCCcchHHHHHHHHHHHHHHHhhhhhc-----
Q 048119 169 TSINLLPNTIFSIDLVHPNERKFKDTVWGMMEEAGKPNLSDHFPLLKKLDLQGTRHRNTLYAGEMFEVQEHGCSI----- 243 (266)
Q Consensus 169 ~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~----- 243 (266)
+++|++++++||.+.+..+...+.+.+......... .|. ++|... .++..++.+.+.+++++.+++
T Consensus 183 ~~~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~------~~~--~~p~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~ 253 (490)
T PLN02500 183 FTFNLMAKHIMSMDPGEEETEQLKKEYVTFMKGVVS------APL--NFPGTA-YRKALKSRATILKFIERKMEERIEKL 253 (490)
T ss_pred HHHHHHHHHHhCCCCCchHHHHHHHHHHHHHhhhhc------chh--cCCCcc-cHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999986543223333333333322111 111 123111 233444555555555555441
Q ss_pred --C---CCCCCHHHHHHhcc
Q 048119 244 --S---IKSKDMLDTVLNII 258 (266)
Q Consensus 244 --~---~~~~d~l~~ll~~~ 258 (266)
. ..++|+++.+++..
T Consensus 254 ~~~~~~~~~~d~l~~ll~~~ 273 (490)
T PLN02500 254 KEEDESVEEDDLLGWVLKHS 273 (490)
T ss_pred hcccCCCCcchHHHHHHhcc
Confidence 1 13469999999753
No 17
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=99.94 E-value=1.4e-25 Score=193.53 Aligned_cols=216 Identities=24% Similarity=0.346 Sum_probs=169.2
Q ss_pred CCCCCCCccccccc--------hHHHHHHHHhcCCcEEEecCccccCCceEEEEeCCHHHHHHHHHHcCccccCC-----
Q 048119 33 PPGLRPYPVIGNLL--------HKSLAKLAKIHGPIMNLRLGVRLSFNLVTTVVVSSPSTAKAILKEHDSLFCDR----- 99 (266)
Q Consensus 33 ppgp~~~p~~G~~~--------~~~~~~~~~~yG~i~~~~~~~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~----- 99 (266)
||||+++|++||+. +.++.+++++|||++++++++ +++++|+||+++++|+.+++..++.+
T Consensus 1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~------~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~ 74 (463)
T PF00067_consen 1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGG------QPIVVVSDPELIKEILRSRSKYFSFRPRPPW 74 (463)
T ss_dssp SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETT------EEEEEEESHHHHHHHHTTTTTTEEEEHCHHH
T ss_pred CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEec------ccccccccchhhccccccccccccccccccc
Confidence 79999999999998 567899999999999999999 99999999999999998876556543
Q ss_pred ------CCCCCcccccCCChhHHHHHHHHHhhhcchh-hhhhhHHHHHHHHHHHHHHHHHhhhCCccccHHHHHHHHHHH
Q 048119 100 ------KHHEFSLVWLPVSTLWRSYRKMCNMHIFNRQ-KLDASQDLRHKKIKDLLTYVEENCRAGKAIDFGQAAFNTSIN 172 (266)
Q Consensus 100 ------~~~~~~l~~~~~g~~w~~~Rk~~~~~~f~~~-~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~ 172 (266)
...+.++++.+ |+.|+.+|+.++++ |+.. .+ .+.+.+.++++++++.|.+..+.++.+|+.++++.+++|
T Consensus 75 ~~~~~~~~~~~~l~~~~-~~~~~~~R~~~~~~-~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d 151 (463)
T PF00067_consen 75 FEIFRGPFGGKGLFFSD-GERWRRQRRLLAPA-FSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALD 151 (463)
T ss_dssp HHHHHHHHTTTSSTTSS-HHHHHHHHHHHHHH-HSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHH
T ss_pred ccccccccccccccccc-cccccccccccccc-ccccccc-ccccccccccccccccccccccccceeeeeccccccccc
Confidence 24577888886 89999999999977 6666 66 899999999999999999876555579999999999999
Q ss_pred HHHHHHhcCCccCcc---HHHHHHHHHHHHHHhCCC--CccchhcccccCCCcchHHHHHHHHHHHHHHHhhhhhc----
Q 048119 173 LLPNTIFSIDLVHPN---ERKFKDTVWGMMEEAGKP--NLSDHFPLLKKLDLQGTRHRNTLYAGEMFEVQEHGCSI---- 243 (266)
Q Consensus 173 vi~~~~fG~~~~~~~---~~~~~~~~~~~~~~~~~~--~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~---- 243 (266)
+++.++||.+++..+ ...+.+.+..+.+.+... .+...+|+++++| ....++..++.+.+.+++.+.+++
T Consensus 152 ~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 230 (463)
T PF00067_consen 152 VIGRVLFGKDFGSLDDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYLP-TPLFRRFKRARDRLRKYIKEIIEERREE 230 (463)
T ss_dssp HHHHHHHSSHHHGTTHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred ccccccccceeeecccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccc
Confidence 999999999987443 124555566555443221 2344567666665 234455666666777776666652
Q ss_pred ---C-CCCCCHHHHHHhcc
Q 048119 244 ---S-IKSKDMLDTVLNII 258 (266)
Q Consensus 244 ---~-~~~~d~l~~ll~~~ 258 (266)
. ....|+++.+++..
T Consensus 231 ~~~~~~~~~d~l~~ll~~~ 249 (463)
T PF00067_consen 231 LDDGDESRRDLLDSLLQAS 249 (463)
T ss_dssp HHSSSSSCSSHHHHHHHHH
T ss_pred ccccccccccccccccccc
Confidence 1 24679999999986
No 18
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=99.94 E-value=6.9e-25 Score=191.03 Aligned_cols=217 Identities=15% Similarity=0.133 Sum_probs=153.7
Q ss_pred CCCCCCCCCCccccccc---------hHHHHHHHHhcCCcEE---EecCccccCCceEEEEeCCHHHHHHHHHHcCcccc
Q 048119 30 KHLPPGLRPYPVIGNLL---------HKSLAKLAKIHGPIMN---LRLGVRLSFNLVTTVVVSSPSTAKAILKEHDSLFC 97 (266)
Q Consensus 30 ~~~ppgp~~~p~~G~~~---------~~~~~~~~~~yG~i~~---~~~~~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~ 97 (266)
++..|||+++|++||+. .+++.+...+||..++ +++|+ .++|+|+||+++++|+.++...|.
T Consensus 30 ~~~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~------~~~vvv~dpe~i~~il~~~~~~~~ 103 (500)
T PLN02169 30 PHGQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSG------TDMLFTADPKNIHHILSSNFGNYP 103 (500)
T ss_pred cCCCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCC------CCeEEEcCHHHHHHHHhhCcccCC
Confidence 33468999999999986 2344444445786555 67788 999999999999999998777776
Q ss_pred CC-------CCCCCcccccCCChhHHHHHHHHHhhhcchhhhhh--hHHHHHHHHHHHHHHHHHhhhCCccccHHHHHHH
Q 048119 98 DR-------KHHEFSLVWLPVSTLWRSYRKMCNMHIFNRQKLDA--SQDLRHKKIKDLLTYVEENCRAGKAIDFGQAAFN 168 (266)
Q Consensus 98 ~~-------~~~~~~l~~~~~g~~w~~~Rk~~~~~~f~~~~l~~--~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~ 168 (266)
++ ...|.|+++++ |+.|+++||+++|. |+..++.. +.+.+.++++.+++.+.+.+..+.++|+.+.+.+
T Consensus 104 k~~~~~~~~~~~g~gl~~~~-g~~Wr~~Rk~l~p~-F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~ 181 (500)
T PLN02169 104 KGPEFKKIFDVLGEGILTVD-FELWEDLRKSNHAL-FHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMR 181 (500)
T ss_pred CcHHHHHHHHhhcCcccccC-cHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHH
Confidence 65 33478998886 99999999999965 88887754 3477778889999998765555678999999999
Q ss_pred HHHHHHHHHHhcCCccCcc----HHHHHHHHHHHHHHhCCCCccchhccc-----ccCCCcchHHHHHHHHHHHHHHHhh
Q 048119 169 TSINLLPNTIFSIDLVHPN----ERKFKDTVWGMMEEAGKPNLSDHFPLL-----KKLDLQGTRHRNTLYAGEMFEVQEH 239 (266)
Q Consensus 169 ~~~~vi~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~p~l-----~~l~~~~~~~~~~~~~~~~~~~~~~ 239 (266)
+|+|+|++++||.+.+..+ ..++.+.+....+.... ....|++ .+++ .+..++..++.+.+++++.+
T Consensus 182 ~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 257 (500)
T PLN02169 182 FMFDTSSILMTGYDPMSLSIEMLEVEFGEAADIGEEAIYY---RHFKPVILWRLQNWIG-IGLERKMRTALATVNRMFAK 257 (500)
T ss_pred HHHHHHHhheeCCCccccCCCCCCCHHHHHHHHHHHHHHh---HHhccHHHHHHHHHhC-CchhhHHHHHHHHHHHHHHH
Confidence 9999999999999875432 13455544443332211 1122321 1222 23345666777777777777
Q ss_pred hhhcC-----------CCCCCHHHHHHhcc
Q 048119 240 GCSIS-----------IKSKDMLDTVLNII 258 (266)
Q Consensus 240 ~i~~~-----------~~~~d~l~~ll~~~ 258 (266)
+|+++ ...+|+++.+++..
T Consensus 258 ~I~~r~~~~~~~~~~~~~~~d~l~~ll~~~ 287 (500)
T PLN02169 258 IISSRRKEEISRAETEPYSKDALTYYMNVD 287 (500)
T ss_pred HHHHHHHHhhccccccCCCcCHHHHHHhcc
Confidence 66521 11369999999864
No 19
>PLN02196 abscisic acid 8'-hydroxylase
Probab=99.93 E-value=1.7e-24 Score=187.19 Aligned_cols=208 Identities=19% Similarity=0.213 Sum_probs=153.0
Q ss_pred CCCCCCCCCCCCCccccccc-------hHHHHHHHHhcCCcEEEecCccccCCceEEEEeCCHHHHHHHHHHcCccccCC
Q 048119 27 GRRKHLPPGLRPYPVIGNLL-------HKSLAKLAKIHGPIMNLRLGVRLSFNLVTTVVVSSPSTAKAILKEHDSLFCDR 99 (266)
Q Consensus 27 ~~~~~~ppgp~~~p~~G~~~-------~~~~~~~~~~yG~i~~~~~~~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~ 99 (266)
.++.+.||||+++|++||+. +.++.+++++||+++++++++ +++|+++||+++++++.++...|...
T Consensus 31 ~~~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~------~~~v~v~~p~~~~~vl~~~~~~~~~~ 104 (463)
T PLN02196 31 STKLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLG------CPCVMISSPEAAKFVLVTKSHLFKPT 104 (463)
T ss_pred CCCCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecC------CceEEEcCHHHHHHHHhCCCCccccc
Confidence 34567789999999999875 668899999999999999999 99999999999999998776656322
Q ss_pred -------CCCCCcccccCCChhHHHHHHHHHhhhcchhhhhhhHHHHHHHHHHHHHHHHHhhhCCccccHHHHHHHHHHH
Q 048119 100 -------KHHEFSLVWLPVSTLWRSYRKMCNMHIFNRQKLDASQDLRHKKIKDLLTYVEENCRAGKAIDFGQAAFNTSIN 172 (266)
Q Consensus 100 -------~~~~~~l~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~ 172 (266)
..++.++++.+ |+.|+++||++++. |+.++++.+.+.+.++++++++.|. ++++|+.++++.+++|
T Consensus 105 ~~~~~~~~~g~~~l~~~~-g~~w~~~Rk~l~~~-f~~~~l~~~~~~i~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~ 177 (463)
T PLN02196 105 FPASKERMLGKQAIFFHQ-GDYHAKLRKLVLRA-FMPDAIRNMVPDIESIAQESLNSWE-----GTQINTYQEMKTYTFN 177 (463)
T ss_pred CchHHHHHcCcccccccC-cHHHHHHHHHHHHh-cChHHHHHHHHHHHHHHHHHHHcCC-----CCeEEeHHHHHHHHHH
Confidence 22234676665 99999999999965 9999999999999999999988773 3478999999999999
Q ss_pred HHHHHHhcCCccCccHHHHHHHHHHHHHHhCCCCccchhcccccCCCcchHHHHHHHHHHHHHHHhhhhhc----CCCCC
Q 048119 173 LLPNTIFSIDLVHPNERKFKDTVWGMMEEAGKPNLSDHFPLLKKLDLQGTRHRNTLYAGEMFEVQEHGCSI----SIKSK 248 (266)
Q Consensus 173 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~----~~~~~ 248 (266)
+++.++||.+..... ..+.+.+.... . ....+|+ ++|.. ..++..++.+.+.+++.+.|++ ..+..
T Consensus 178 v~~~~~fG~~~~~~~-~~~~~~~~~~~----~--~~~~~~~--~~p~~-~~~~~~~a~~~~~~~~~~~i~~~~~~~~~~~ 247 (463)
T PLN02196 178 VALLSIFGKDEVLYR-EDLKRCYYILE----K--GYNSMPI--NLPGT-LFHKSMKARKELAQILAKILSKRRQNGSSHN 247 (463)
T ss_pred HHHHHHcCCCCchHH-HHHHHHHHHHh----c--chhcccc--cCCCc-cchHHHHHHHHHHHHHHHHHHHHhhcCCCcc
Confidence 999999998754322 23332222211 1 1112332 23311 1244555666677777666653 23457
Q ss_pred CHHHHHHhc
Q 048119 249 DMLDTVLNI 257 (266)
Q Consensus 249 d~l~~ll~~ 257 (266)
|+++.+++.
T Consensus 248 d~l~~ll~~ 256 (463)
T PLN02196 248 DLLGSFMGD 256 (463)
T ss_pred cHHHHHHhc
Confidence 999999864
No 20
>PLN02774 brassinosteroid-6-oxidase
Probab=99.93 E-value=2.2e-24 Score=186.58 Aligned_cols=208 Identities=13% Similarity=0.098 Sum_probs=150.8
Q ss_pred CCCCCCCCCCCccccccc------hHHHHHHHHhcCCcEEEecCccccCCceEEEEeCCHHHHHHHHHHcCccccCC---
Q 048119 29 RKHLPPGLRPYPVIGNLL------HKSLAKLAKIHGPIMNLRLGVRLSFNLVTTVVVSSPSTAKAILKEHDSLFCDR--- 99 (266)
Q Consensus 29 ~~~~ppgp~~~p~~G~~~------~~~~~~~~~~yG~i~~~~~~~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~--- 99 (266)
+++.||||+++|++||+. ..++.+++++||+++++++|+ +++++++||+++++++.++...|..+
T Consensus 29 r~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~------~~~v~i~~p~~~~~il~~~~~~~~~~~~~ 102 (463)
T PLN02774 29 KKGLPPGTMGWPLFGETTEFLKQGPDFMKNQRLRYGSFFKSHILG------CPTIVSMDPELNRYILMNEGKGLVPGYPQ 102 (463)
T ss_pred CCCCCCCCCCCCchhhHHHHHHhhHHHHHHHHHHhccCccceecC------CCeEEEeCHHHHHHHHcCCCCeEEecCCH
Confidence 356789999999999976 567889999999999999999 99999999999999998766555332
Q ss_pred ----CCCCCcccccCCChhHHHHHHHHHhhhcchhhhhh-hHHHHHHHHHHHHHHHHHhhhCCccccHHHHHHHHHHHHH
Q 048119 100 ----KHHEFSLVWLPVSTLWRSYRKMCNMHIFNRQKLDA-SQDLRHKKIKDLLTYVEENCRAGKAIDFGQAAFNTSINLL 174 (266)
Q Consensus 100 ----~~~~~~l~~~~~g~~w~~~Rk~~~~~~f~~~~l~~-~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~vi 174 (266)
.+++.+++.. +|+.|+++|+++++. |+.+.++. +.+.+.+.++++++.|.. ++++|+.+.+..++++++
T Consensus 103 ~~~~~lg~~~~~~~-~g~~w~~~R~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~ 176 (463)
T PLN02774 103 SMLDILGTCNIAAV-HGSTHRYMRGSLLSL-ISPTMIRDHLLPKIDEFMRSHLSGWDG----LKTIDIQEKTKEMALLSA 176 (463)
T ss_pred HHHHHhCccchhhc-CCHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHhhCC----CCCEEeeHHHHHHHHHHH
Confidence 2333456665 599999999999855 89988876 789999988888887742 357999999999999999
Q ss_pred HHHHhcCCccCccHHHHHHHHHHHHHHhCCCCccchhcccccCCCcchHHHHHHHHHHHHHHHhhhhhc----CCCCCCH
Q 048119 175 PNTIFSIDLVHPNERKFKDTVWGMMEEAGKPNLSDHFPLLKKLDLQGTRHRNTLYAGEMFEVQEHGCSI----SIKSKDM 250 (266)
Q Consensus 175 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~----~~~~~d~ 250 (266)
++++||.+.+... .++.+.+..+ ... ...+|. ++|.. ..++..++.+.+.+++++.|++ ....+|+
T Consensus 177 ~~~~~g~~~~~~~-~~~~~~~~~~---~~~---~~~~~~--~lp~~-~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~d~ 246 (463)
T PLN02774 177 LKQIAGTLSKPIS-EEFKTEFFKL---VLG---TLSLPI--DLPGT-NYRSGVQARKNIVRMLRQLIQERRASGETHTDM 246 (463)
T ss_pred HHHHcCCCChHHH-HHHHHHHHHH---hcc---cccCCc--CCCCh-hhhHHHHHHHHHHHHHHHHHHHHHhcCCCcccH
Confidence 9999998654322 2333322222 111 011221 34422 2345556677777777777653 2345799
Q ss_pred HHHHHhcc
Q 048119 251 LDTVLNII 258 (266)
Q Consensus 251 l~~ll~~~ 258 (266)
++.+++..
T Consensus 247 l~~ll~~~ 254 (463)
T PLN02774 247 LGYLMRKE 254 (463)
T ss_pred HHHHHhCc
Confidence 99999743
No 21
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=99.92 E-value=2.1e-24 Score=187.32 Aligned_cols=202 Identities=21% Similarity=0.244 Sum_probs=157.1
Q ss_pred CCCCCCCCCCCccccccc---------hHHHHHHHHhcCCcEEEecCccccCCceEEEEeCCHHHHHHHHHHcCccccCC
Q 048119 29 RKHLPPGLRPYPVIGNLL---------HKSLAKLAKIHGPIMNLRLGVRLSFNLVTTVVVSSPSTAKAILKEHDSLFCDR 99 (266)
Q Consensus 29 ~~~~ppgp~~~p~~G~~~---------~~~~~~~~~~yG~i~~~~~~~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~ 99 (266)
....||||+++|++|++. ..++.++..+||++++.++|+ .+.|+++||+.+++|+.++..++.+.
T Consensus 33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~v~~~dp~~~~~Il~~~~~~~~k~ 106 (497)
T KOG0157|consen 33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGG------KPTVVTTDPELIEEILKSSNENYPKG 106 (497)
T ss_pred HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcC------eeEEEEcCHHHHHHHHhcCcccCCCc
Confidence 467789999999999987 457788889999999999999 99999999999999997555544333
Q ss_pred --------CCCCCcccccCCChhHHHHHHHHHhhhcchhhhhhhHHHHHHHHHHHHHHHHHhhhCCccccHHHHHHHHHH
Q 048119 100 --------KHHEFSLVWLPVSTLWRSYRKMCNMHIFNRQKLDASQDLRHKKIKDLLTYVEENCRAGKAIDFGQAAFNTSI 171 (266)
Q Consensus 100 --------~~~~~~l~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~ 171 (266)
.+.|+|+++++ |+.|+++||+++|+ |+.+.++.+.+.+.+.+..+...+.... .++.+|+++.++++|+
T Consensus 107 ~~~~~~~~~~lG~gll~~~-g~~W~~~Rk~~~~~-f~~~~L~~~~~~~~~~~~~~~~~~~~~~-~~~~vd~~~~~~~~tl 183 (497)
T KOG0157|consen 107 PDYPESLKPWLGDGLLFSD-GEKWHKHRKLLTPA-FHFEILKSFVPVFIESSLILLLLLELAA-SGEEVDLQDLLKRLTL 183 (497)
T ss_pred hhHHHHHHHHhcCccccCC-chHHHHHHhhccHh-hhHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCeEcHHHHHHHHHH
Confidence 45678999997 99999999999976 9999999999999999999888887643 3334999999999999
Q ss_pred HHHHHHHhcCCc-cCcc--HHHHHHHHHHHHHHhCCCCccchhc-ccccCCCcchHHHHHHHHHHHHHHHhhhhh
Q 048119 172 NLLPNTIFSIDL-VHPN--ERKFKDTVWGMMEEAGKPNLSDHFP-LLKKLDLQGTRHRNTLYAGEMFEVQEHGCS 242 (266)
Q Consensus 172 ~vi~~~~fG~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~ 242 (266)
|+|+.++||... +.+. ..++.+++..+...+.. ....| ...+++..+..++..++.+.++++++++|+
T Consensus 184 d~i~~~~~G~~~~~~~~~~~~~~~~a~~~~~~~~~~---~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~ 255 (497)
T KOG0157|consen 184 DIICKTAMGPESLDAEGPELFEYVQAFDDLTELISK---RINLPLGTKFLYGLKSERKLKKARKILHDFLEKIIR 255 (497)
T ss_pred HHHHHHhcCCccccccCCcccHHHHHHHHHHHHHHH---HHcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999222 2121 23566666655554433 12334 333444233568888899999999888887
No 22
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=99.92 E-value=8.3e-24 Score=185.44 Aligned_cols=218 Identities=13% Similarity=0.149 Sum_probs=149.2
Q ss_pred CCCCCCCCccccccc-----hHHHHHHHHhc---CCcEEEecCccccCCceEEEEeCCHHHHHHHHHHcCccccCC----
Q 048119 32 LPPGLRPYPVIGNLL-----HKSLAKLAKIH---GPIMNLRLGVRLSFNLVTTVVVSSPSTAKAILKEHDSLFCDR---- 99 (266)
Q Consensus 32 ~ppgp~~~p~~G~~~-----~~~~~~~~~~y---G~i~~~~~~~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~---- 99 (266)
.+|||+++|++||++ +..+.+|.++| |+++++++|+ .+.++++||+++++|+.++...|.++
T Consensus 31 ~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~------~~~v~i~~p~~~~~il~~~~~~~~~~~~~~ 104 (516)
T PLN03195 31 NRKGPKSWPIIGAALEQLKNYDRMHDWLVEYLSKDRTVVVKMPF------TTYTYIADPVNVEHVLKTNFANYPKGEVYH 104 (516)
T ss_pred ccCCCCCCCeecchHHHHhccchHHHHHHHHhccCCcEEEeeCC------CCceEecCHHHHHHHHhhCccccCCcHhHH
Confidence 368999999999985 33456777777 8999999999 99999999999999998765556544
Q ss_pred ----CCCCCcccccCCChhHHHHHHHHHhhhcchhhhhhhHHHH-HHHHHHHHHHHHHhhhCCccccHHHHHHHHHHHHH
Q 048119 100 ----KHHEFSLVWLPVSTLWRSYRKMCNMHIFNRQKLDASQDLR-HKKIKDLLTYVEENCRAGKAIDFGQAAFNTSINLL 174 (266)
Q Consensus 100 ----~~~~~~l~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~-~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~vi 174 (266)
...|.|+++. +|+.|+++||.+++. |+.++++.+.+.+ .+.++.+.+.+.+....++++|+.++++.+++|++
T Consensus 105 ~~~~~~~g~~l~~~-~g~~w~~~Rr~l~~~-fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi 182 (516)
T PLN03195 105 SYMEVLLGDGIFNV-DGELWRKQRKTASFE-FASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSI 182 (516)
T ss_pred HHHHHHhcCeeecc-CcHHHHHHHHhcchh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHH
Confidence 1246777766 599999999999966 8999999999986 66677788877654334668999999999999999
Q ss_pred HHHHhcCCccCcc----HHHHHHHHHHHHHHhCCCCccchhcccc-cCCCcchHHHHHHHHHHHHHHHhhhhhcC-----
Q 048119 175 PNTIFSIDLVHPN----ERKFKDTVWGMMEEAGKPNLSDHFPLLK-KLDLQGTRHRNTLYAGEMFEVQEHGCSIS----- 244 (266)
Q Consensus 175 ~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~p~l~-~l~~~~~~~~~~~~~~~~~~~~~~~i~~~----- 244 (266)
+.++||.+++..+ ...+.+.+......... .....++.+. +++ .+..+...+..+.+++++.+.+++.
T Consensus 183 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 260 (516)
T PLN03195 183 CKVGFGVEIGTLSPSLPENPFAQAFDTANIIVTL-RFIDPLWKLKKFLN-IGSEALLSKSIKVVDDFTYSVIRRRKAEMD 260 (516)
T ss_pred HHHHhCCCccccccCCCccHHHHHHHHHHHHHHH-HHhcchhhHHHhcc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999886532 12344444433221110 0011111111 122 1122333445555665555555411
Q ss_pred -------CCCCCHHHHHHhccc
Q 048119 245 -------IKSKDMLDTVLNIIQ 259 (266)
Q Consensus 245 -------~~~~d~l~~ll~~~~ 259 (266)
...+|+++.+++..+
T Consensus 261 ~~~~~~~~~~~d~l~~ll~~~~ 282 (516)
T PLN03195 261 EARKSGKKVKHDILSRFIELGE 282 (516)
T ss_pred ccccccccccccHHHHHHhccC
Confidence 124699999997643
No 23
>PLN02302 ent-kaurenoic acid oxidase
Probab=99.92 E-value=7.7e-23 Score=178.47 Aligned_cols=212 Identities=17% Similarity=0.189 Sum_probs=146.5
Q ss_pred CCCCCCCCCCCCCccccccc-----------hHHHHHHHHhcCC--cEEEecCccccCCceEEEEeCCHHHHHHHHHHcC
Q 048119 27 GRRKHLPPGLRPYPVIGNLL-----------HKSLAKLAKIHGP--IMNLRLGVRLSFNLVTTVVVSSPSTAKAILKEHD 93 (266)
Q Consensus 27 ~~~~~~ppgp~~~p~~G~~~-----------~~~~~~~~~~yG~--i~~~~~~~~~~~~~~~~v~v~dp~~~~~i~~~~~ 93 (266)
....+.||||+++|++|+++ +.++.+++++||+ ++++++++ .++++++||+++++|+.++
T Consensus 38 ~~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~------~~~vvv~~pe~~~~vl~~~- 110 (490)
T PLN02302 38 EGQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFG------QPTVLVTTPEACKRVLTDD- 110 (490)
T ss_pred cCCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCC------CCeEEEcCHHHHHHHHcCC-
Confidence 34567899999999999975 4468999999997 78999999 9999999999999999755
Q ss_pred ccccCC-------CCCCCcccccCCChhHHHHHHHHHhhhcchhhhhhhHHHHHHHHHHHHHHHHHhhhCCccccHHHHH
Q 048119 94 SLFCDR-------KHHEFSLVWLPVSTLWRSYRKMCNMHIFNRQKLDASQDLRHKKIKDLLTYVEENCRAGKAIDFGQAA 166 (266)
Q Consensus 94 ~~~~~~-------~~~~~~l~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~ 166 (266)
+.|.++ .+++.++... +|+.|+++||.+++++.+.++++.+.+.+.++++++++.+.. ++.+|+.+.+
T Consensus 111 ~~f~~~~~~~~~~~~g~~~~~~~-~g~~w~~~R~~~~~~f~~~~~l~~~~~~i~~~v~~~~~~~~~----~~~v~~~~~~ 185 (490)
T PLN02302 111 DAFEPGWPESTVELIGRKSFVGI-TGEEHKRLRRLTAAPVNGPEALSTYIPYIEENVKSCLEKWSK----MGEIEFLTEL 185 (490)
T ss_pred CccccCCchhHHHHhcccccccc-CcHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHhcC----CCCEehHHHH
Confidence 445433 1222334444 599999999999977335778999999999999999998853 2469999999
Q ss_pred HHHHHHHHHHHHhcCCccCccHHHHHHHHHHHHHHhCCCCccchhcccccCCCcchHHHHHHHHHHHHHHHhhhhh----
Q 048119 167 FNTSINLLPNTIFSIDLVHPNERKFKDTVWGMMEEAGKPNLSDHFPLLKKLDLQGTRHRNTLYAGEMFEVQEHGCS---- 242 (266)
Q Consensus 167 ~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~---- 242 (266)
+.+++++++.++||.+.+... .++.+.+..+...... ++. .+|... .++..+..+.+.+++.+.++
T Consensus 186 ~~~~~~vi~~~~~G~~~~~~~-~~~~~~~~~~~~~~~~------~~~--~~p~~~-~~~~~~~~~~l~~~~~~~i~~~~~ 255 (490)
T PLN02302 186 RKLTFKIIMYIFLSSESELVM-EALEREYTTLNYGVRA------MAI--NLPGFA-YHRALKARKKLVALFQSIVDERRN 255 (490)
T ss_pred HHHHHHHHHHHHcCCCChHHH-HHHHHHHHHHHHHhhh------CCc--CCCchh-hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998865432 3333322222211111 111 122111 12333344455555554443
Q ss_pred cC-----CCCCCHHHHHHhcccc
Q 048119 243 IS-----IKSKDMLDTVLNIIQD 260 (266)
Q Consensus 243 ~~-----~~~~d~l~~ll~~~~~ 260 (266)
+. ....|+++.++++.++
T Consensus 256 ~~~~~~~~~~~d~l~~ll~~~~~ 278 (490)
T PLN02302 256 SRKQNISPRKKDMLDLLLDAEDE 278 (490)
T ss_pred hhhccCCCCcCCHHHHHHhhhcc
Confidence 11 1457999999987543
No 24
>PLN02936 epsilon-ring hydroxylase
Probab=99.91 E-value=4.4e-23 Score=179.53 Aligned_cols=219 Identities=19% Similarity=0.218 Sum_probs=156.6
Q ss_pred CCCCCCCCCccccccc-----------hHHHHHHHHhcCCcEEEecCccccCCceEEEEeCCHHHHHHHHHHcCccccCC
Q 048119 31 HLPPGLRPYPVIGNLL-----------HKSLAKLAKIHGPIMNLRLGVRLSFNLVTTVVVSSPSTAKAILKEHDSLFCDR 99 (266)
Q Consensus 31 ~~ppgp~~~p~~G~~~-----------~~~~~~~~~~yG~i~~~~~~~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~ 99 (266)
+.-.|-.+||++|+.+ +..+.+|+++|||++++++|+ .++|+++||+++++|+.+.+..|.++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~------~~~vvv~~pe~~~~il~~~~~~f~~~ 85 (489)
T PLN02936 12 RLWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGP------RNFVVVSDPAIAKHVLRNYGSKYAKG 85 (489)
T ss_pred ccCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCC------ccEEEEcCHHHHHHHHHhccccccCc
Confidence 4457888999999977 778999999999999999999 99999999999999998766667655
Q ss_pred -------CCCCCcccccCCChhHHHHHHHHHhhhcchhhhhhhHH-HHHHHHHHHHHHHHHhhhCCccccHHHHHHHHHH
Q 048119 100 -------KHHEFSLVWLPVSTLWRSYRKMCNMHIFNRQKLDASQD-LRHKKIKDLLTYVEENCRAGKAIDFGQAAFNTSI 171 (266)
Q Consensus 100 -------~~~~~~l~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~-~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~ 171 (266)
...|.++++++ |+.|+++||.+++. |+.++++.+.+ .+.++++++++.|.+.+.+++++|+.++++++++
T Consensus 86 ~~~~~~~~~~~~~i~~~~-g~~wk~~Rk~l~~~-f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~ 163 (489)
T PLN02936 86 LVAEVSEFLFGSGFAIAE-GELWTARRRAVVPS-LHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTL 163 (489)
T ss_pred chhhhhHHHhcCccccCC-chHHHHHHHhhcCc-cCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHH
Confidence 12466777765 99999999999976 88888888755 7889999999999876545678999999999999
Q ss_pred HHHHHHHhcCCccCcc-HHHHHHHHHHHHHHhCCCCccchhccccc--CC-CcchHHHHHHHHHHHHHHHhhhhhc----
Q 048119 172 NLLPNTIFSIDLVHPN-ERKFKDTVWGMMEEAGKPNLSDHFPLLKK--LD-LQGTRHRNTLYAGEMFEVQEHGCSI---- 243 (266)
Q Consensus 172 ~vi~~~~fG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~l~~--l~-~~~~~~~~~~~~~~~~~~~~~~i~~---- 243 (266)
|+++.++||.+++..+ ..++.+.+......... .....+|++.+ +. ..+..++..++.+.+.+++.+.+++
T Consensus 164 dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~~ 242 (489)
T PLN02936 164 DVIGLSVFNYNFDSLTTDSPVIQAVYTALKEAET-RSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEI 242 (489)
T ss_pred HHHHHHHcCCCccccccCcHHHHHHHHHHHHHHH-hhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999987643 12344444333222211 11223343211 00 1112344555555555555554431
Q ss_pred ---C-----------CCCCCHHHHHHhcc
Q 048119 244 ---S-----------IKSKDMLDTVLNII 258 (266)
Q Consensus 244 ---~-----------~~~~d~l~~ll~~~ 258 (266)
. ....|+++.|++..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~d~l~~ll~~~ 271 (489)
T PLN02936 243 VEAEGEVIEGEEYVNDSDPSVLRFLLASR 271 (489)
T ss_pred HhhcccccccccccccCchHHHHHHHhcc
Confidence 0 12368999999764
No 25
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=99.91 E-value=1.7e-22 Score=174.77 Aligned_cols=209 Identities=20% Similarity=0.203 Sum_probs=141.3
Q ss_pred CCCCCCCCCCCCCccccccc-----------hHHHHHHHHhcCCcEEEecCccccCCceEEEEeCCHHHHHHHHHHcCcc
Q 048119 27 GRRKHLPPGLRPYPVIGNLL-----------HKSLAKLAKIHGPIMNLRLGVRLSFNLVTTVVVSSPSTAKAILKEHDSL 95 (266)
Q Consensus 27 ~~~~~~ppgp~~~p~~G~~~-----------~~~~~~~~~~yG~i~~~~~~~~~~~~~~~~v~v~dp~~~~~i~~~~~~~ 95 (266)
+.+.+.||||.++|++||++ ..++.+++++||+++++++++ +++|+++||+++++++.++...
T Consensus 26 ~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~------~~~vvv~~pe~~~~il~~~~~~ 99 (472)
T PLN02987 26 YRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFG------EPTVFSADPETNRFILQNEGKL 99 (472)
T ss_pred cCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcC------CCeEEEeCHHHHHHHHhCCCce
Confidence 44567899999999999875 235678999999999999999 9999999999999999987776
Q ss_pred ccCC-------CCCCCcccccCCChhHHHHHHHHHhhhcchhhhhhhHHHHHHHHHHHHHHHHHhhhCCccccHHHHHHH
Q 048119 96 FCDR-------KHHEFSLVWLPVSTLWRSYRKMCNMHIFNRQKLDASQDLRHKKIKDLLTYVEENCRAGKAIDFGQAAFN 168 (266)
Q Consensus 96 ~~~~-------~~~~~~l~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~ 168 (266)
|.++ .+++.|+++++ |+.|+++||++. ++++.+.++.+. .+++.++++...+.. ++++|+.+.+.+
T Consensus 100 f~~~~~~~~~~~lg~~~l~~~~-g~~wr~~R~~~~-~f~~~~~~~~~~---~~~~~~~~~~~~~~~--~~~v~~~~~~~~ 172 (472)
T PLN02987 100 FECSYPGSISNLLGKHSLLLMK-GNLHKKMHSLTM-SFANSSIIKDHL---LLDIDRLIRFNLDSW--SSRVLLMEEAKK 172 (472)
T ss_pred EEecCcHHHHHHhCcccccccC-cHHHHHHHHHHH-HhcChHHHHHHH---HHHHHHHHHHHHHhh--ccceehHHHHHH
Confidence 7544 23346788875 999999999986 534444444432 222333333221111 136899999999
Q ss_pred HHHHHHHHHHhcCCccCccHHHHHHHHHHHHHHhCCCCccchhcccccCCCcchHHHHHHHHHHHHHHHhhhhhcC----
Q 048119 169 TSINLLPNTIFSIDLVHPNERKFKDTVWGMMEEAGKPNLSDHFPLLKKLDLQGTRHRNTLYAGEMFEVQEHGCSIS---- 244 (266)
Q Consensus 169 ~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~---- 244 (266)
++++++++++||.+.+... +.+.+.+........ ...+|++ .+..++..+..+++.+++.+.|++.
T Consensus 173 ~t~~vi~~~~fg~~~~~~~-~~~~~~~~~~~~~~~----~~~~p~l-----~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 242 (472)
T PLN02987 173 ITFELTVKQLMSFDPGEWT-ESLRKEYVLVIEGFF----SVPLPLF-----STTYRRAIQARTKVAEALTLVVMKRRKEE 242 (472)
T ss_pred HHHHHHHHHHcCCCChHHH-HHHHHHHHHHHhhhh----cCCCcCC-----CchHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999998765332 333333332222111 1123432 1234556667777777777777521
Q ss_pred ----CCCCCHHHHHHhcc
Q 048119 245 ----IKSKDMLDTVLNII 258 (266)
Q Consensus 245 ----~~~~d~l~~ll~~~ 258 (266)
...+|+++.|++..
T Consensus 243 ~~~~~~~~d~l~~ll~~~ 260 (472)
T PLN02987 243 EEGAEKKKDMLAALLASD 260 (472)
T ss_pred hccCcccccHHHHHHhcC
Confidence 13579999999764
No 26
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=99.90 E-value=2.2e-22 Score=173.69 Aligned_cols=209 Identities=16% Similarity=0.196 Sum_probs=145.6
Q ss_pred CCCCCCCCCCCCccccccc-----------hHHHHHHHHhcCCcEEEecCccccCCceEEEEeCCHHHHHHHHHHcCccc
Q 048119 28 RRKHLPPGLRPYPVIGNLL-----------HKSLAKLAKIHGPIMNLRLGVRLSFNLVTTVVVSSPSTAKAILKEHDSLF 96 (266)
Q Consensus 28 ~~~~~ppgp~~~p~~G~~~-----------~~~~~~~~~~yG~i~~~~~~~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~ 96 (266)
++.+.||||.++|++||++ +.++.+++++||+||++++|+ .++|+++||++++++|.+++..|
T Consensus 4 ~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~------~~~vvv~~p~~~~~vl~~~~~~~ 77 (452)
T PLN03141 4 KKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFG------TPTIVSTDAEVNKVVLQSDGNAF 77 (452)
T ss_pred CCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCC------CCEEEEeCHHHhhHHHhCCCCee
Confidence 4577899999999999976 357789999999999999999 99999999999999999877666
Q ss_pred cCC-------CCCCCcccccCCChhHHHHHHHHHhhhcchhhhhh-hHHHHHHHHHHHHHHHHHhhhCCccccHHHHHHH
Q 048119 97 CDR-------KHHEFSLVWLPVSTLWRSYRKMCNMHIFNRQKLDA-SQDLRHKKIKDLLTYVEENCRAGKAIDFGQAAFN 168 (266)
Q Consensus 97 ~~~-------~~~~~~l~~~~~g~~w~~~Rk~~~~~~f~~~~l~~-~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~ 168 (266)
..+ ..++.++++.+ |+.|+++|+++++. |+..++.. ..+.+.+.++++++.|. .++++|+.+.+..
T Consensus 78 ~~~~~~~~~~l~g~~~~~~~~-g~~wr~~r~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 151 (452)
T PLN03141 78 VPAYPKSLTELMGKSSILLIN-GSLQRRVHGLIGAF-LKSPHLKAQITRDMERYVSESLDSWR----DDPPVLVQDETKK 151 (452)
T ss_pred eccCchhHHHHhCcccccccC-cHHHHHHHHHHHHh-cCcHHHHHHHHHHHHHHHHHHHHhcc----CCCCEEhHHHHHH
Confidence 543 22223566664 99999999999966 77766655 35566666666655542 3457899999999
Q ss_pred HHHHHHHHHHhcCCccCccHHHHHHHHHHHHHHhCCCCccchhcccccCCCcchHHHHHHHHHHHHHHHhhhhhcC----
Q 048119 169 TSINLLPNTIFSIDLVHPNERKFKDTVWGMMEEAGKPNLSDHFPLLKKLDLQGTRHRNTLYAGEMFEVQEHGCSIS---- 244 (266)
Q Consensus 169 ~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~---- 244 (266)
++++++++++||.+.+... .++.+.+..+..... .+|. ++|... ..+..++.+++.+++.+.|+++
T Consensus 152 ~~~~vi~~~~~G~~~~~~~-~~~~~~~~~~~~~~~------~~~~--~~p~~~-~~~~~~~~~~l~~~~~~~i~~~~~~~ 221 (452)
T PLN03141 152 IAFEVLVKALISLEPGEEM-EFLKKEFQEFIKGLM------SLPI--KLPGTR-LYRSLQAKKRMVKLVKKIIEEKRRAM 221 (452)
T ss_pred HHHHHHHHHHcCCCchHHH-HHHHHHHHHHhhhHH------hCcc--CCCchH-hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998764321 333333333332211 1232 233222 2334455666666666666411
Q ss_pred --C------CCCCHHHHHHhcc
Q 048119 245 --I------KSKDMLDTVLNII 258 (266)
Q Consensus 245 --~------~~~d~l~~ll~~~ 258 (266)
+ .++|+++.+++..
T Consensus 222 ~~~~~~~~~~~~d~l~~ll~~~ 243 (452)
T PLN03141 222 KNKEEDETGIPKDVVDVLLRDG 243 (452)
T ss_pred hccCccccCChhhHHHHHHhcC
Confidence 1 1469999999764
No 27
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.89 E-value=5.9e-22 Score=165.31 Aligned_cols=201 Identities=18% Similarity=0.248 Sum_probs=158.6
Q ss_pred CCCCCCCCCCccccccc----------hHHHHHHHHhcCCcEEEe-cCccccCCceEEEEeCCHHHHHHHHHHcCccccC
Q 048119 30 KHLPPGLRPYPVIGNLL----------HKSLAKLAKIHGPIMNLR-LGVRLSFNLVTTVVVSSPSTAKAILKEHDSLFCD 98 (266)
Q Consensus 30 ~~~ppgp~~~p~~G~~~----------~~~~~~~~~~yG~i~~~~-~~~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~ 98 (266)
....|||+++|++|.+. |+.....+++|||||+.. +|+ ...|++.||++++.+|++++. ++-
T Consensus 49 ~~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~------~~~V~v~~p~d~E~v~r~EG~-~P~ 121 (519)
T KOG0159|consen 49 FEEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGR------VDLVHVYNPDDVEKVFRNEGK-YPF 121 (519)
T ss_pred hhhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCC------CCeEEeeCHHHHHHHHhcCCC-CCC
Confidence 34468999999999887 778888999999999999 888 999999999999999987653 332
Q ss_pred C-------------CCCCCcccccCCChhHHHHHHHHHhhhcchhhhhhhHHHHHHHHHHHHHHHHHhhh---CCccccH
Q 048119 99 R-------------KHHEFSLVWLPVSTLWRSYRKMCNMHIFNRQKLDASQDLRHKKIKDLLTYVEENCR---AGKAIDF 162 (266)
Q Consensus 99 ~-------------~~~~~~l~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~---~~~~~d~ 162 (266)
| ..+..|++..+ |++|++.|..+++.+.++++++.+.|.++++++++++.+.+..+ +..+.|+
T Consensus 122 Rp~~~~~w~~~rd~~~~~~Gl~~~~-G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~ 200 (519)
T KOG0159|consen 122 RPLLIEPWVAYRDFRGGVCGLFLLE-GPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDF 200 (519)
T ss_pred cccccchhhhhHHhhccCCCcccCC-CHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhH
Confidence 2 22356787776 99999999999999999999999999999999999999987654 2236799
Q ss_pred HHHHHHHHHHHHHHHHhcCCccCcc------HHHHHHHHHHHHHHhCCCCccchh-cccccCCCcchHHHHHHHHHHHHH
Q 048119 163 GQAAFNTSINLLPNTIFSIDLVHPN------ERKFKDTVWGMMEEAGKPNLSDHF-PLLKKLDLQGTRHRNTLYAGEMFE 235 (266)
Q Consensus 163 ~~~~~~~~~~vi~~~~fG~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~-p~l~~l~~~~~~~~~~~~~~~~~~ 235 (266)
.+.+.+++++.||.++||++++... .+.+.+++..++..... .... +++++++ ++.++++.++.+.+.+
T Consensus 201 ~~~l~~wslEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~---l~~~p~l~r~~~-t~~wk~~~~~~D~i~~ 276 (519)
T KOG0159|consen 201 AQELYRWSLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQ---LMLMPSLWRYFP-TKVWKDFVRAWDQIFD 276 (519)
T ss_pred HHHHHHHHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHH---HHhcchHHHhCC-ChHHHHHHHHHHHHHH
Confidence 9999999999999999999998653 35677777777766544 2233 4677776 3445666666665555
Q ss_pred HHhhhhh
Q 048119 236 VQEHGCS 242 (266)
Q Consensus 236 ~~~~~i~ 242 (266)
+.++.|+
T Consensus 277 ~~~~~Id 283 (519)
T KOG0159|consen 277 VGDKYID 283 (519)
T ss_pred HHHHHHH
Confidence 5555444
No 28
>PLN02738 carotene beta-ring hydroxylase
Probab=99.89 E-value=1.3e-21 Score=173.69 Aligned_cols=131 Identities=18% Similarity=0.285 Sum_probs=115.9
Q ss_pred hHHHHHHHHhcCCcEEEecCccccCCceEEEEeCCHHHHHHHHHHcCccccCC-------CCCCCcccccCCChhHHHHH
Q 048119 47 HKSLAKLAKIHGPIMNLRLGVRLSFNLVTTVVVSSPSTAKAILKEHDSLFCDR-------KHHEFSLVWLPVSTLWRSYR 119 (266)
Q Consensus 47 ~~~~~~~~~~yG~i~~~~~~~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~-------~~~~~~l~~~~~g~~w~~~R 119 (266)
+..+.++|++||||+++++|+ .++++|+||+.+++|+.++...|.++ ...+.++++.+ |+.|+++|
T Consensus 154 ~~~l~~lh~kYGpI~ri~lGp------~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~~g~~l~~~d-ge~wr~rR 226 (633)
T PLN02738 154 FIPLYELFLTYGGIFRLTFGP------KSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFVMGKGLIPAD-GEIWRVRR 226 (633)
T ss_pred HHHHHHHHHHhCCEEEEEeCC------CCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhccCCceecCC-cHHHHHHH
Confidence 678899999999999999999 89999999999999998776666655 22466777664 99999999
Q ss_pred HHHHhhhcchhhhhhhHHHHHHHHHHHHHHHHHhhhCCccccHHHHHHHHHHHHHHHHHhcCCccC
Q 048119 120 KMCNMHIFNRQKLDASQDLRHKKIKDLLTYVEENCRAGKAIDFGQAAFNTSINLLPNTIFSIDLVH 185 (266)
Q Consensus 120 k~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~~~~ 185 (266)
+.+++. |+..+++.+.+.+.++++++++.|.+.+++++++|+.+.++.+|+|||+.++||.+++.
T Consensus 227 r~l~p~-Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~ 291 (633)
T PLN02738 227 RAIVPA-LHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDS 291 (633)
T ss_pred HhccHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCccc
Confidence 999966 99999999999999999999999987655677899999999999999999999999875
No 29
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=99.84 E-value=3.8e-19 Score=155.08 Aligned_cols=201 Identities=14% Similarity=0.147 Sum_probs=140.6
Q ss_pred hHHHHHHHHhcC-CcEEEecCccccCCceEEEEeCCHHHHHHHHHHcCccccCC--------CCCCCcccccCCChhHHH
Q 048119 47 HKSLAKLAKIHG-PIMNLRLGVRLSFNLVTTVVVSSPSTAKAILKEHDSLFCDR--------KHHEFSLVWLPVSTLWRS 117 (266)
Q Consensus 47 ~~~~~~~~~~yG-~i~~~~~~~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~--------~~~~~~l~~~~~g~~w~~ 117 (266)
+.+..++.++++ .+++++..+ . ++++||+.+++|+.++..+|.+. ...|.|+++++ |+.|++
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~------~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~g~gi~~~~-g~~wk~ 133 (502)
T PLN02426 63 CDWYAHLLRRSPTGTIHVHVLG------N--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLLGRGIFNVD-GDSWRF 133 (502)
T ss_pred HHHHHHHHHhCCCcEEEEecCC------c--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhcCCceeecC-cHHHHH
Confidence 456656777776 567776666 4 89999999999998876667654 23478888775 999999
Q ss_pred HHHHHHhhhcchhhhhhhH--HHHHHHHHHHHHHHHHhhhC--CccccHHHHHHHHHHHHHHHHHhcCCccCcc----HH
Q 048119 118 YRKMCNMHIFNRQKLDASQ--DLRHKKIKDLLTYVEENCRA--GKAIDFGQAAFNTSINLLPNTIFSIDLVHPN----ER 189 (266)
Q Consensus 118 ~Rk~~~~~~f~~~~l~~~~--~~~~~~~~~~~~~l~~~~~~--~~~~d~~~~~~~~~~~vi~~~~fG~~~~~~~----~~ 189 (266)
+||.+++. |+..+++.+. +.+.+.++++++.+.+.++. ++++|+.++++++|+|+|+.++||.+++..+ ..
T Consensus 134 ~Rk~l~~~-fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~l~~~~~~~ 212 (502)
T PLN02426 134 QRKMASLE-LGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLDPGCLELSLPIS 212 (502)
T ss_pred HHHHhHhh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCCCcccCCCCCcc
Confidence 99999966 8988888764 67788888899888765432 3579999999999999999999999986532 23
Q ss_pred HHHHHHHHHHHHhCCCCccchhcc----cccCCCcchHHHHHHHHHHHHHHHhhhhhcC-----CCCCCHHHHHHhccc
Q 048119 190 KFKDTVWGMMEEAGKPNLSDHFPL----LKKLDLQGTRHRNTLYAGEMFEVQEHGCSIS-----IKSKDMLDTVLNIIQ 259 (266)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~p~----l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~-----~~~~d~l~~ll~~~~ 259 (266)
++.+.+..+...... .....+|+ .++++. +..++..+..+.+.+++.++|+++ ...+|+++.++++.+
T Consensus 213 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~I~~r~~~~~~~~~dll~~ll~~~~ 289 (502)
T PLN02426 213 EFADAFDTASKLSAE-RAMAASPLLWKIKRLLNI-GSERKLKEAIKLVDELAAEVIRQRRKLGFSASKDLLSRFMASIN 289 (502)
T ss_pred HHHHHHHHHHHHHHH-HHhcchhHHHHHHHhccc-chhHHHHHHHHHHHHHHHHHHHHHHhcccCCcchHHHHHHhcCC
Confidence 455555443322111 01111222 123332 234566777778888888777632 235799999998653
No 30
>PLN02648 allene oxide synthase
Probab=99.81 E-value=1.2e-19 Score=156.41 Aligned_cols=148 Identities=8% Similarity=0.064 Sum_probs=121.3
Q ss_pred CCCCCCCCCCCccccccc-----------hHHHHHHHHhcCC-cEEEecCccccCCceEE-------EEeCCHHHHHHHH
Q 048119 29 RKHLPPGLRPYPVIGNLL-----------HKSLAKLAKIHGP-IMNLRLGVRLSFNLVTT-------VVVSSPSTAKAIL 89 (266)
Q Consensus 29 ~~~~ppgp~~~p~~G~~~-----------~~~~~~~~~~yG~-i~~~~~~~~~~~~~~~~-------v~v~dp~~~~~i~ 89 (266)
+.+.|||+.+||++|+.. ..++.+.+++||+ ||+++++| .|+ |+++||++++.+|
T Consensus 15 ~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g------~p~~~~~~~~v~~~~~e~~~~v~ 88 (480)
T PLN02648 15 PLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPP------GPFIAPDPRVIALLDQKSFPVLF 88 (480)
T ss_pred CCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCC------CCCCCCCCCEEEEEcCCceeeee
Confidence 466799999999999985 3788999999999 99999988 777 9999999999999
Q ss_pred HH----cCccccCC------CCCCC---cccccCCChhHHHHHHHHHhhhcchhhhhhhHHHHHHHHHHHHHHHHHhhhC
Q 048119 90 KE----HDSLFCDR------KHHEF---SLVWLPVSTLWRSYRKMCNMHIFNRQKLDASQDLRHKKIKDLLTYVEENCRA 156 (266)
Q Consensus 90 ~~----~~~~~~~~------~~~~~---~l~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~ 156 (266)
.. +...+... .+++. +++.. +|+.|+++||++.+. |+ ..++.+.|.|.+.++++++.|......
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~l~G~~~~~s~~~~-~g~~H~r~Rrll~~~-f~-~~~~~~~~~m~~~~~~~~~~w~~~~~~ 165 (480)
T PLN02648 89 DVSKVDKRDVFTGTYMPSTAFTGGYRVLSYLDP-SEPKHAKLKSFLFEL-LK-SRHRRFIPEFRAAFAELFDTWEAELAK 165 (480)
T ss_pred cchhccccccceeeeccCccccCCceeeeecCC-CCchHHHHHHHHHHH-HH-HhhhhhhhHHHHHHHHHHHHHHHHHhh
Confidence 74 33223221 33334 44444 599999999999966 88 577899999999999999999654334
Q ss_pred CccccHHHHHHHHHHHHHHHHHhcCCccC
Q 048119 157 GKAIDFGQAAFNTSINLLPNTIFSIDLVH 185 (266)
Q Consensus 157 ~~~~d~~~~~~~~~~~vi~~~~fG~~~~~ 185 (266)
++++|+.+.++++|+|++++++||.+.+.
T Consensus 166 ~~~vdv~~~~~~lt~~vi~~~lfG~~~~~ 194 (480)
T PLN02648 166 KGKAEFNDPLDQMAFNFLCKALTGKDPSE 194 (480)
T ss_pred CCCccccchHHHHHHHHHHHHHcCCCcch
Confidence 55799999999999999999999997665
No 31
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.69 E-value=2.6e-15 Score=123.31 Aligned_cols=210 Identities=11% Similarity=0.043 Sum_probs=151.2
Q ss_pred CCCCCCCC-Cccccccc------hHHHHHHHHhcCCcEEEecCccccCCceEEEEeCCHHHHHHHHHHcCccccCC----
Q 048119 31 HLPPGLRP-YPVIGNLL------HKSLAKLAKIHGPIMNLRLGVRLSFNLVTTVVVSSPSTAKAILKEHDSLFCDR---- 99 (266)
Q Consensus 31 ~~ppgp~~-~p~~G~~~------~~~~~~~~~~yG~i~~~~~~~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~---- 99 (266)
..||--++ .|++|+.. .+++++.++||||||++..+| +.+.++.+|+....++..+.....-.
T Consensus 31 ~~PPli~gwiP~lG~a~~fgk~P~eFl~~~~~K~GdVFTv~l~G------k~~Tfll~p~~~~~v~~~~~~~ld~~~~~~ 104 (486)
T KOG0684|consen 31 KEPPLIKGWIPWLGSALAFGKDPLEFLRECRKKYGDVFTVLLMG------KYMTFLLGPEGYDFVFKAKLADLDFEEAYS 104 (486)
T ss_pred CCCcccccCcchhhHHHHhccCHHHHHHHHHHhcCCeEEEEEcC------cEEEEEeCchhhHHHHcCcccccCHHHHHH
Confidence 46776664 49999988 789999999999999999999 99999999999999997653222211
Q ss_pred ----CCCCCcccccCCChhHHHHHHHHHhhhcchhhhhhhHHHHHHHHHHHHHH-HHHhhhCCccccHHHHHHHHHHHHH
Q 048119 100 ----KHHEFSLVWLPVSTLWRSYRKMCNMHIFNRQKLDASQDLRHKKIKDLLTY-VEENCRAGKAIDFGQAAFNTSINLL 174 (266)
Q Consensus 100 ----~~~~~~l~~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~-l~~~~~~~~~~d~~~~~~~~~~~vi 174 (266)
...|+|+.....+....++.+.+..+ ....+++.+.+.|.++.++.++. |.+ .+.+-.+.+....+.+.+.
T Consensus 105 ~l~~~vFg~~v~~d~~~~~~~e~~~~~k~~-L~~~~lk~~~e~m~~el~~~f~~~~~~---s~~~d~l~~~~~~ii~tAs 180 (486)
T KOG0684|consen 105 KLTTPVFGKGVVYDVPNHVMMEQKKFFKSA-LGGVALKSLVELMLEELHAYFETSLGE---SGETDGLYTFCRLIIFTAS 180 (486)
T ss_pred HhhhhhcCCCccccCCCchHHHHHHHHHHH-hchhhHHHHHHHHHHHHHHHHhccccc---ccchhHhhhhhHHHhhhhH
Confidence 33477887765588888898998866 68889999999999999999887 333 3434445666666666655
Q ss_pred HHHHhcCCccCccHHHHHHHHHHHHHHhCCCCccchhcccccCCCcchHHHHHHHHHHHHHHHhhhhhcCC-----CCCC
Q 048119 175 PNTIFSIDLVHPNERKFKDTVWGMMEEAGKPNLSDHFPLLKKLDLQGTRHRNTLYAGEMFEVQEHGCSISI-----KSKD 249 (266)
Q Consensus 175 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~-----~~~d 249 (266)
-.+.||+.....+ .+....+.+....+... -..||. ++|++. .++..++++++.+.+...|.++. ...|
T Consensus 181 ~~ll~~e~r~~~d-~~~a~l~~dLd~~F~~~--d~~FP~--~LP~~~-~r~~~ra~~~i~k~f~~~i~~rr~s~s~~~~d 254 (486)
T KOG0684|consen 181 RLLLGGEVRDQLD-ADVAKLYHDLDQGFQPF--DFLFPY--NLPIPL-LRRRDRARKKISKIFSKIILDRRASISKWDND 254 (486)
T ss_pred HHhhhhhhhhhhc-chHHHHHHHHhccccch--Hhhccc--CCCcch-hhhHHHHHHHHHHHHHHHHHHHHhccccccHH
Confidence 5666666665544 45555556555554442 345675 677554 45566888888888887776332 2348
Q ss_pred HHHHHHh
Q 048119 250 MLDTVLN 256 (266)
Q Consensus 250 ~l~~ll~ 256 (266)
+++.+++
T Consensus 255 mlq~l~~ 261 (486)
T KOG0684|consen 255 MLQSLME 261 (486)
T ss_pred HHHHHHH
Confidence 9999988
No 32
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.46 E-value=3.6e-12 Score=108.71 Aligned_cols=187 Identities=17% Similarity=0.117 Sum_probs=134.6
Q ss_pred HHHHHHHhcCCcEEEecCccccCCceE--EEEeCCHHHHHHHHHHcCccccCC-----------CCCCCc-ccccCCChh
Q 048119 49 SLAKLAKIHGPIMNLRLGVRLSFNLVT--TVVVSSPSTAKAILKEHDSLFCDR-----------KHHEFS-LVWLPVSTL 114 (266)
Q Consensus 49 ~~~~~~~~yG~i~~~~~~~~~~~~~~~--~v~v~dp~~~~~i~~~~~~~~~~~-----------~~~~~~-l~~~~~g~~ 114 (266)
....+.+.||.+...+..+ .. .+++++++.+++++.++. .+++. ...|.+ +++.+ |+.
T Consensus 27 ~~~~~~~p~~~~~~~~~~~------~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~d-g~~ 98 (411)
T COG2124 27 FLERAEDPYGDYFTLRLPG------PGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLD-GPE 98 (411)
T ss_pred hHHHHhCCCchhhhhhccC------ccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecC-CHH
Confidence 3445667788888877655 43 799999999999997652 12211 122444 55564 999
Q ss_pred HHHHHHHHHhhhcchhhhhhhHHHHHHHHHHHHHHHHHhhhCCccccHHHHHHHHHHHHHHHHHhcCCccCccHHHHHHH
Q 048119 115 WRSYRKMCNMHIFNRQKLDASQDLRHKKIKDLLTYVEENCRAGKAIDFGQAAFNTSINLLPNTIFSIDLVHPNERKFKDT 194 (266)
Q Consensus 115 w~~~Rk~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~ 194 (266)
|+++||+++++ |+++.++.+.|.+.+.++++++.+ . .++..++.+.+..++++||+ .+||.+.+... .+...
T Consensus 99 H~r~Rkl~~~~-F~~~~~~~~~~~i~~~~~~~~~~~-~---~~~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~~--~~~~~ 170 (411)
T COG2124 99 HTRLRKLLAPA-FTPRALRGYRPLIREIADRLLDDL-W---QGGADLVLDFAAELTLRVIA-ELLGVPLEDRP--QLLRW 170 (411)
T ss_pred HHHHHHHhccc-cCHHHHHHHHHHHHHHHHHHHHhc-c---cCCchhHHHHhhhhhHHHHH-HHhCCCHHHHH--HHHHH
Confidence 99999999977 999999999999999999999998 3 23678899999999999999 99999876542 22222
Q ss_pred HHHHHHHhCCCCccchhcccccCCCcchHHHHHHHHHHHHHHHhhhhhcC--CCCCCHHHHHHhcccccC
Q 048119 195 VWGMMEEAGKPNLSDHFPLLKKLDLQGTRHRNTLYAGEMFEVQEHGCSIS--IKSKDMLDTVLNIIQDKS 262 (266)
Q Consensus 195 ~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~d~l~~ll~~~~~~~ 262 (266)
........ .|. ..+ .....+..++.+.+.+++.++|+++ ...+|+++.|+.+.++++
T Consensus 171 ~~~~~~~~--------~~~--~~~-~~~~~~~~~a~~~~~~~~~~li~~rR~~~~~dlls~l~~a~~~~~ 229 (411)
T COG2124 171 SDALLLRL--------DPD--LGP-EEPWRRARAARRELDAYLRALIAERRAAPRDDLLSLLLSAEDDGG 229 (411)
T ss_pred HHHHHhcc--------Ccc--cCC-cccHHHHHHHHHHHHHHHHHHHHHhccCCcccHHHHHHHHhhCCC
Confidence 22222110 011 111 1224667788888999999999854 466899999998876654
No 33
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=86.17 E-value=3.2 Score=27.88 Aligned_cols=63 Identities=24% Similarity=0.217 Sum_probs=44.8
Q ss_pred CCCCCCCCCCCccccccc----hHHHHHHHHhcCCcEEEecCccccCCceEEEEeCCHHHHHHHHHH
Q 048119 29 RKHLPPGLRPYPVIGNLL----HKSLAKLAKIHGPIMNLRLGVRLSFNLVTTVVVSSPSTAKAILKE 91 (266)
Q Consensus 29 ~~~~ppgp~~~p~~G~~~----~~~~~~~~~~yG~i~~~~~~~~~~~~~~~~v~v~dp~~~~~i~~~ 91 (266)
+.+.||.-..+-.+-|++ .+.+-++.-+||+|.++++|..---...-.|+-.|-..++..+..
T Consensus 10 ~~rlppevnriLyirNLp~~ITseemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~dh 76 (124)
T KOG0114|consen 10 NIRLPPEVNRILYIRNLPFKITSEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKACDH 76 (124)
T ss_pred CCCCChhhheeEEEecCCccccHHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHHHH
Confidence 456677666777778887 778888999999999999984100000456777788888877753
No 34
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=50.05 E-value=71 Score=28.15 Aligned_cols=55 Identities=13% Similarity=0.082 Sum_probs=30.8
Q ss_pred CCccccccchHHHH-HHHHhcCCcEEEecCccccCCceEEEEeCCHHHHHHHHHHcCccccC
Q 048119 38 PYPVIGNLLHKSLA-KLAKIHGPIMNLRLGVRLSFNLVTTVVVSSPSTAKAILKEHDSLFCD 98 (266)
Q Consensus 38 ~~p~~G~~~~~~~~-~~~~~yG~i~~~~~~~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~ 98 (266)
..|+.+......+. .-.-+||.|++-..-+ +.+-|=.-|..-++-++++.+.|+.
T Consensus 203 sspl~~l~pl~l~eli~~Grfg~V~KaqL~~------~~VAVKifp~~~kqs~~~Ek~Iy~l 258 (534)
T KOG3653|consen 203 SSPLLELDPLQLLELIGRGRFGCVWKAQLDN------RLVAVKIFPEQEKQSFQNEKNIYSL 258 (534)
T ss_pred CcccccCCchhhHHHhhcCccceeehhhccC------ceeEEEecCHHHHHHHHhHHHHHhc
Confidence 45666654422222 2234678777766666 5555555666666666665555543
No 35
>cd01646 RT_Bac_retron_I RT_Bac_retron_I: Reverse transcriptases (RTs) in bacterial retrotransposons or retrons. The polymerase reaction of this enzyme leads to the production of a unique RNA-DNA complex called msDNA (multicopy single-stranded (ss)DNA) in which a small ssDNA branches out from a small ssRNA molecule via a 2'-5'phosphodiester linkage. Bacterial retron RTs produce cDNA corresponding to only a small portion of the retron genome.
Probab=36.66 E-value=79 Score=22.96 Aligned_cols=57 Identities=18% Similarity=0.160 Sum_probs=34.6
Q ss_pred CCCCCCCCCCCCccccccchHHHHHHHHh-cCCcEEEecCccccCCceEEEEeCCHHHHHHHHH
Q 048119 28 RRKHLPPGLRPYPVIGNLLHKSLAKLAKI-HGPIMNLRLGVRLSFNLVTTVVVSSPSTAKAILK 90 (266)
Q Consensus 28 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~-yG~i~~~~~~~~~~~~~~~~v~v~dp~~~~~i~~ 90 (266)
.....|.|+...|+++++....+.+...+ .+.+..++.-. .-+++..+++.+++++.
T Consensus 50 ~~~GlpqG~~lS~~L~~~~l~~~d~~i~~~~~~~~~~RY~D------D~~i~~~~~~~~~~~~~ 107 (158)
T cd01646 50 QTNGLPIGPLTSRFLANIYLNDVDHELKSKLKGVDYVRYVD------DIRIFADSKEEAEEILE 107 (158)
T ss_pred CCceEccCcchHHHHHHHHHHHHHHHHHhccCCceEEEecC------cEEEEcCCHHHHHHHHH
Confidence 34677889888899999883334444433 45555555444 34455666676655554
No 36
>PRK12333 nucleoside triphosphate pyrophosphohydrolase; Reviewed
Probab=35.70 E-value=2.1e+02 Score=22.15 Aligned_cols=49 Identities=4% Similarity=0.105 Sum_probs=32.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhCCccccHHHHHHHHHHHHHHHHHhcCCccC
Q 048119 133 DASQDLRHKKIKDLLTYVEENCRAGKAIDFGQAAFNTSINLLPNTIFSIDLVH 185 (266)
Q Consensus 133 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~~~~ 185 (266)
.++.+.+.+++-++++.+.. +..-++.+++..+.+.|+...-.+..-+.
T Consensus 26 ~SL~~yllEE~yEv~dAI~~----~d~~~l~EELGDlLlqVvfha~iaee~g~ 74 (204)
T PRK12333 26 ESLRPYLLEEAAEAVDALSE----GDPQELAEELGDVLLQVAFHSVIAEEEGR 74 (204)
T ss_pred HHHHHHHHHHHHHHHHHHHc----CCHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 45677788888888877754 33456777777777777766666654443
No 37
>PF13625 Helicase_C_3: Helicase conserved C-terminal domain
Probab=33.83 E-value=1.2e+02 Score=21.17 Aligned_cols=37 Identities=14% Similarity=0.153 Sum_probs=28.5
Q ss_pred hHHHHHHHHhcCCcEEEecCccccCCceEEEEeCCHHHHHHHHHH
Q 048119 47 HKSLAKLAKIHGPIMNLRLGVRLSFNLVTTVVVSSPSTAKAILKE 91 (266)
Q Consensus 47 ~~~~~~~~~~yG~i~~~~~~~~~~~~~~~~v~v~dp~~~~~i~~~ 91 (266)
...+.+|.++||.+.- .- + ...+...|++.++++...
T Consensus 77 ~~~i~~w~~~~g~v~l-~~-~------~~~l~~~d~~~l~~l~~~ 113 (129)
T PF13625_consen 77 EQSIEDWARRYGRVRL-YK-G------AYLLECDDPELLDELLAD 113 (129)
T ss_pred HHHHHHHHHhcCCEEE-ec-C------eEEEEECCHHHHHHHHhC
Confidence 5688999999997643 22 4 567789999999999853
No 38
>PHA03049 IMV membrane protein; Provisional
Probab=29.90 E-value=1.4e+02 Score=18.29 Aligned_cols=15 Identities=20% Similarity=0.481 Sum_probs=6.1
Q ss_pred CCCCCCCCCCccccc
Q 048119 30 KHLPPGLRPYPVIGN 44 (266)
Q Consensus 30 ~~~ppgp~~~p~~G~ 44 (266)
...||.|.-.+..-+
T Consensus 30 q~~~p~~e~ye~~e~ 44 (68)
T PHA03049 30 SQNPPSQEKYEKMED 44 (68)
T ss_pred CCCCCChhhccCchh
Confidence 444444433333333
No 39
>PF00076 RRM_1: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); InterPro: IPR000504 Many eukaryotic proteins containing one or more copies of a putative RNA-binding domain of about 90 amino acids are known to bind single-stranded RNAs [, , ]. The largest group of single strand RNA-binding proteins is the eukaryotic RNA recognition motif (RRM) family that contains an eight amino acid RNP-1 consensus sequence [, ]. RRM proteins have a variety of RNA binding preferences and functions, and include heterogeneous nuclear ribonucleoproteins (hnRNPs), proteins implicated in regulation of alternative splicing (SR, U2AF, Sxl), protein components of small nuclear ribonucleoproteins (U1 and U2 snRNPs), and proteins that regulate RNA stability and translation (PABP, La, Hu) [, , ]. The RRM in heterodimeric splicing factor U2 snRNP auxiliary factor (U2AF) appears to have two RRM-like domains with specialised features for protein recognition []. The motif also appears in a few single stranded DNA binding proteins. The typical RRM consists of four anti-parallel beta-strands and two alpha-helices arranged in a beta-alpha-beta-beta-alpha-beta fold with side chains that stack with RNA bases. Specificity of RNA binding is determined by multiple contacts with surrounding amino acids. A third helix is present during RNA binding in some cases []. The RRM is reviewed in a number of publications [, , ].; GO: 0003676 nucleic acid binding; PDB: 2RNE_A 2DGO_A 2DO4_A 1YTY_B 2VOO_B 2VOP_A 2VON_B 1ZH5_B 2VOD_A 1S79_A ....
Probab=28.93 E-value=1.3e+02 Score=17.60 Aligned_cols=50 Identities=24% Similarity=0.239 Sum_probs=31.7
Q ss_pred ccccc----hHHHHHHHHhcCCcEEEecCcccc--CCceEEEEeCCHHHHHHHHHH
Q 048119 42 IGNLL----HKSLAKLAKIHGPIMNLRLGVRLS--FNLVTTVVVSSPSTAKAILKE 91 (266)
Q Consensus 42 ~G~~~----~~~~~~~~~~yG~i~~~~~~~~~~--~~~~~~v~v~dp~~~~~i~~~ 91 (266)
+|+++ ...+.++..+||++..+.+..-.+ ...--.|...+++.++.++..
T Consensus 3 v~nlp~~~t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~a~V~F~~~~~a~~a~~~ 58 (70)
T PF00076_consen 3 VGNLPPDVTEEELRDFFSQFGKIESIKVMRNSSGKSKGYAFVEFESEEDAEKALEE 58 (70)
T ss_dssp EESETTTSSHHHHHHHHHTTSTEEEEEEEEETTSSEEEEEEEEESSHHHHHHHHHH
T ss_pred EcCCCCcCCHHHHHHHHHHhhhcccccccccccccccceEEEEEcCHHHHHHHHHH
Confidence 45555 667888888999886555332000 000245677899999999873
No 40
>PLN03134 glycine-rich RNA-binding protein 4; Provisional
Probab=28.71 E-value=2e+02 Score=20.63 Aligned_cols=46 Identities=22% Similarity=0.216 Sum_probs=34.9
Q ss_pred ccccccc----hHHHHHHHHhcCCcEEEecC---------ccccCCceEEEEeCCHHHHHHHHHH
Q 048119 40 PVIGNLL----HKSLAKLAKIHGPIMNLRLG---------VRLSFNLVTTVVVSSPSTAKAILKE 91 (266)
Q Consensus 40 p~~G~~~----~~~~~~~~~~yG~i~~~~~~---------~~~~~~~~~~v~v~dp~~~~~i~~~ 91 (266)
-++|++. .+.+.++.++||+|..+.+. + --.|-..+++.++.++..
T Consensus 37 lfVgnL~~~~te~~L~~~F~~~G~I~~v~i~~d~~tg~~kG------faFV~F~~~e~A~~Al~~ 95 (144)
T PLN03134 37 LFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRG------FGFVNFNDEGAATAAISE 95 (144)
T ss_pred EEEeCCCCCCCHHHHHHHHhcCCCeEEEEEEecCCCCCcce------EEEEEECCHHHHHHHHHH
Confidence 4567777 66888888999998776652 2 356778899999999964
No 41
>PLN03120 nucleic acid binding protein; Provisional
Probab=27.66 E-value=2.9e+02 Score=22.34 Aligned_cols=59 Identities=14% Similarity=0.218 Sum_probs=39.2
Q ss_pred cccccc----hHHHHHHHHhcCCcEEEecCccccCCceEEEEeCCHHHHHHHHHHcCccccCC
Q 048119 41 VIGNLL----HKSLAKLAKIHGPIMNLRLGVRLSFNLVTTVVVSSPSTAKAILKEHDSLFCDR 99 (266)
Q Consensus 41 ~~G~~~----~~~~~~~~~~yG~i~~~~~~~~~~~~~~~~v~v~dp~~~~~i~~~~~~~~~~~ 99 (266)
++||+. ...+.++...||+|..+.+..-..-...-.|-..+++.++..+.-++..+.++
T Consensus 8 fVgNLs~~tTE~dLrefFS~~G~I~~V~I~~d~~~~GfAFVtF~d~eaAe~AllLnG~~l~gr 70 (260)
T PLN03120 8 KVSNVSLKATERDIKEFFSFSGDIEYVEMQSENERSQIAYVTFKDPQGAETALLLSGATIVDQ 70 (260)
T ss_pred EEeCCCCCCCHHHHHHHHHhcCCeEEEEEeecCCCCCEEEEEeCcHHHHHHHHHhcCCeeCCc
Confidence 456665 66778888899999888762100000046778889999999997665555544
No 42
>PF13893 RRM_5: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=27.10 E-value=1.3e+02 Score=17.05 Aligned_cols=38 Identities=16% Similarity=0.139 Sum_probs=24.8
Q ss_pred HHHHHhcCCcEEEecCccccCCceEEEEeCCHHHHHHHHH
Q 048119 51 AKLAKIHGPIMNLRLGVRLSFNLVTTVVVSSPSTAKAILK 90 (266)
Q Consensus 51 ~~~~~~yG~i~~~~~~~~~~~~~~~~v~v~dp~~~~~i~~ 90 (266)
.+...+||+|..+.+..-. ...-.|-..+++.++....
T Consensus 2 ~~~f~~fG~V~~i~~~~~~--~~~a~V~f~~~~~A~~a~~ 39 (56)
T PF13893_consen 2 YKLFSKFGEVKKIKIFKKK--RGFAFVEFASVEDAQKAIE 39 (56)
T ss_dssp HHHHTTTS-EEEEEEETTS--TTEEEEEESSHHHHHHHHH
T ss_pred hHHhCCcccEEEEEEEeCC--CCEEEEEECCHHHHHHHHH
Confidence 4567789999888754300 0045667789999888885
No 43
>TIGR01661 ELAV_HUD_SF ELAV/HuD family splicing factor. These proteins contain 3 RNA-recognition motifs (rrm: pfam00076).
Probab=26.78 E-value=1.5e+02 Score=24.70 Aligned_cols=52 Identities=17% Similarity=0.109 Sum_probs=35.0
Q ss_pred ccccccc----hHHHHHHHHhcCCcEEEecCccc-c--CCceEEEEeCCHHHHHHHHHH
Q 048119 40 PVIGNLL----HKSLAKLAKIHGPIMNLRLGVRL-S--FNLVTTVVVSSPSTAKAILKE 91 (266)
Q Consensus 40 p~~G~~~----~~~~~~~~~~yG~i~~~~~~~~~-~--~~~~~~v~v~dp~~~~~i~~~ 91 (266)
-++||+. .+.+.++..+||+|..+.+..-. + --.--.|...+++.+...+..
T Consensus 272 lfV~NL~~~~~e~~L~~~F~~fG~v~~v~i~~d~~t~~skG~aFV~F~~~~~A~~Ai~~ 330 (352)
T TIGR01661 272 IFVYNLSPDTDETVLWQLFGPFGAVQNVKIIRDLTTNQCKGYGFVSMTNYDEAAMAILS 330 (352)
T ss_pred EEEeCCCCCCCHHHHHHHHHhCCCeEEEEEeEcCCCCCccceEEEEECCHHHHHHHHHH
Confidence 4668887 66788888999999888764200 0 000237788899988888764
No 44
>smart00362 RRM_2 RNA recognition motif.
Probab=25.63 E-value=1.4e+02 Score=17.06 Aligned_cols=45 Identities=18% Similarity=0.211 Sum_probs=27.4
Q ss_pred hHHHHHHHHhcCCcEEEecCccc-cCCceEEEEeCCHHHHHHHHHH
Q 048119 47 HKSLAKLAKIHGPIMNLRLGVRL-SFNLVTTVVVSSPSTAKAILKE 91 (266)
Q Consensus 47 ~~~~~~~~~~yG~i~~~~~~~~~-~~~~~~~v~v~dp~~~~~i~~~ 91 (266)
...+.++.++||++..+.+.... .-...-.+-..+++.+++++..
T Consensus 13 ~~~l~~~~~~~g~v~~~~~~~~~~~~~~~~~v~f~~~~~a~~a~~~ 58 (72)
T smart00362 13 EEDLKELFSKFGPIESVKIPKDTGKSKGFAFVEFESEEDAEKAIEA 58 (72)
T ss_pred HHHHHHHHHhcCCEEEEEEecCCCCCCceEEEEeCCHHHHHHHHHH
Confidence 45677777899987665543200 0000345667889888888754
No 45
>PF14259 RRM_6: RNA recognition motif (a.k.a. RRM, RBD, or RNP domain); PDB: 2DNN_A 1WI6_A 2EVZ_A 2ADC_A 1QM9_A 2KG1_A 2HGN_A 1U2F_A 2G4B_A 2HZC_A ....
Probab=22.13 E-value=1.3e+02 Score=17.88 Aligned_cols=47 Identities=23% Similarity=0.193 Sum_probs=28.6
Q ss_pred hHHHHHHHHhcCCcEEEecCcccc--CCceEEEEeCCHHHHHHHHHHcC
Q 048119 47 HKSLAKLAKIHGPIMNLRLGVRLS--FNLVTTVVVSSPSTAKAILKEHD 93 (266)
Q Consensus 47 ~~~~~~~~~~yG~i~~~~~~~~~~--~~~~~~v~v~dp~~~~~i~~~~~ 93 (266)
...+.++...||++-.+.+..-.- ....-.|-..+++.+++++....
T Consensus 12 ~~~l~~~f~~~g~v~~v~~~~~~~~~~~~~a~v~f~~~~~a~~al~~~~ 60 (70)
T PF14259_consen 12 EEDLRNFFSRFGPVEKVRLIKNKDGQSRGFAFVEFSSEEDAKRALELLN 60 (70)
T ss_dssp HHHHHHHCTTSSBEEEEEEEESTTSSEEEEEEEEESSHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCcceEEEEeeeccccCCEEEEEeCCHHHHHHHHHHCC
Confidence 445666677788876665432000 00034667889999999997543
No 46
>KOG3718 consensus Carnitine O-acyltransferase CROT [Lipid transport and metabolism]
Probab=20.52 E-value=3.1e+02 Score=24.35 Aligned_cols=55 Identities=13% Similarity=0.140 Sum_probs=33.8
Q ss_pred eEEEEeCCHHHHHHHHHHcCccccCCCCCCCcc--cccCCChhHHHHHHHHHhhhcchhhh
Q 048119 74 VTTVVVSSPSTAKAILKEHDSLFCDRKHHEFSL--VWLPVSTLWRSYRKMCNMHIFNRQKL 132 (266)
Q Consensus 74 ~~~v~v~dp~~~~~i~~~~~~~~~~~~~~~~~l--~~~~~g~~w~~~Rk~~~~~~f~~~~l 132 (266)
....++..|+.+..++.-....-.. + .|.++ +++++.+.|.+.|.-+- . -+..++
T Consensus 208 Edd~~l~~peel~nllk~~k~~sse-p-~gc~v~~LTs~eRd~WA~nRe~Li-~-~s~aN~ 264 (609)
T KOG3718|consen 208 EDDTILSAPEELVNLLKVRKILSSE-P-LGCCVPTLTSDERDTWARNRERLI-E-ISVANK 264 (609)
T ss_pred cCCcccCCHHHHHHHHHHHHhccCC-C-CCcchhccccccccHHHHHHHHHH-h-cChhhH
Confidence 4555677899999998643221111 1 24443 34555799999998887 4 355554
No 47
>smart00360 RRM RNA recognition motif.
Probab=20.23 E-value=1.8e+02 Score=16.41 Aligned_cols=45 Identities=22% Similarity=0.162 Sum_probs=26.8
Q ss_pred hHHHHHHHHhcCCcEEEecCcccc---CCceEEEEeCCHHHHHHHHHH
Q 048119 47 HKSLAKLAKIHGPIMNLRLGVRLS---FNLVTTVVVSSPSTAKAILKE 91 (266)
Q Consensus 47 ~~~~~~~~~~yG~i~~~~~~~~~~---~~~~~~v~v~dp~~~~~i~~~ 91 (266)
...+.++.+.||++..+.+..-.. ....-.|-..+++.+..++..
T Consensus 10 ~~~l~~~f~~~g~v~~~~i~~~~~~~~~~~~a~v~f~~~~~a~~a~~~ 57 (71)
T smart00360 10 EEELRELFSKFGKIESVRLVRDKDTGKSKGFAFVEFESEEDAEKALEA 57 (71)
T ss_pred HHHHHHHHHhhCCEeEEEEEeCCCCCCCCceEEEEeCCHHHHHHHHHH
Confidence 456677778899887766433000 000234556788888887753
No 48
>TIGR03838 queuosine_YadB glutamyl-queuosine tRNA(Asp) synthetase. This protein resembles a shortened glutamyl-tRNA ligase, but its purpose is to modify tRNA(Asp) at a queuosine position in the anticodon rather than to charge a tRNA with its cognate amino acid.
Probab=20.15 E-value=1e+02 Score=24.98 Aligned_cols=55 Identities=20% Similarity=0.204 Sum_probs=37.2
Q ss_pred CCCCCCCCCCccccccc-hHHHHHHHHhcCCcEEEecCccccCCceEEEEeCCHHHHHHHHHH
Q 048119 30 KHLPPGLRPYPVIGNLL-HKSLAKLAKIHGPIMNLRLGVRLSFNLVTTVVVSSPSTAKAILKE 91 (266)
Q Consensus 30 ~~~ppgp~~~p~~G~~~-~~~~~~~~~~yG~i~~~~~~~~~~~~~~~~v~v~dp~~~~~i~~~ 91 (266)
.+..|-|.+..-+||+. ...-..++++||.-+-+++-- .+. -=+.++..+.|+..
T Consensus 3 ~RFAPSPtG~lHiG~~rtAL~n~l~Ar~~gG~~iLRiED------tD~-~R~~~~~~~~I~~d 58 (272)
T TIGR03838 3 GRFAPSPSGPLHFGSLVAALGSYLDARAHGGRWLVRIED------LDP-PREVPGAADDILRT 58 (272)
T ss_pred eeeCCCCCCcccHHHHHHHHHHHHHHHHhCCEEEEEeCc------CCC-CCCChHHHHHHHHH
Confidence 45679999999999997 444455677888777776643 111 12567877777753
Done!