Query 048121
Match_columns 227
No_of_seqs 232 out of 1098
Neff 6.1
Searched_HMMs 46136
Date Fri Mar 29 06:27:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048121.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/048121hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1696 DltB Predicted membran 100.0 2.8E-38 6.2E-43 295.3 5.2 179 40-220 86-299 (425)
2 PF03062 MBOAT: MBOAT, membran 99.7 6.1E-17 1.3E-21 144.3 9.2 152 63-218 20-235 (322)
3 PF13813 MBOAT_2: Membrane bou 98.9 3.1E-10 6.8E-15 84.1 0.5 42 181-222 2-43 (83)
4 PLN02332 membrane bound O-acyl 98.6 4.2E-07 9.1E-12 87.0 11.9 31 188-219 307-337 (465)
5 PLN02401 diacylglycerol o-acyl 98.0 0.00039 8.4E-09 66.3 17.4 209 7-220 100-354 (446)
6 PLN03242 diacylglycerol o-acyl 97.6 0.0052 1.1E-07 58.3 17.0 128 86-219 181-328 (410)
7 KOG3860 Acyltransferase requir 96.3 0.0056 1.2E-07 59.0 4.9 75 147-223 285-362 (494)
8 KOG0380 Sterol O-acyltransfera 96.1 0.028 6E-07 54.9 8.5 130 86-221 277-426 (523)
9 KOG2704 Predicted membrane pro 90.3 1.5 3.2E-05 42.4 8.4 31 189-220 315-345 (480)
10 COG5056 ARE1 Acyl-CoA choleste 86.8 0.95 2.1E-05 43.4 4.5 65 149-219 363-428 (512)
11 KOG4312 Predicted acyltransfer 63.3 1.4E+02 0.003 28.4 14.3 149 54-215 128-307 (449)
12 COG4459 NapE Periplasmic nitra 26.9 1.5E+02 0.0032 20.9 4.1 43 23-70 10-52 (62)
13 TIGR01710 typeII_sec_gspG gene 25.7 30 0.00066 27.4 0.7 26 177-202 75-100 (134)
14 PF01526 DDE_Tnp_Tn3: Tn3 tran 23.4 30 0.00066 32.8 0.3 30 156-186 171-200 (388)
No 1
>COG1696 DltB Predicted membrane protein involved in D-alanine export [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=2.8e-38 Score=295.34 Aligned_cols=179 Identities=17% Similarity=0.266 Sum_probs=141.5
Q ss_pred HHHHhhhhhhhhhhh-------chhhH---HHHHHHHHHHHhhHhhcc--cCCCCCCCCCcchhhhhhhc-------cce
Q 048121 40 CLFLYLPLCLTSVHI-------GGTTA---FFITWLANFKLLLFAFGL--GPLSSHPPISLPLFVIVSCL-------PIK 100 (227)
Q Consensus 40 ~l~~~lPl~~~~~~~-------~g~~a---F~~~wl~tFk~l~~~~d~--g~l~~~p~~sl~~F~~~~~~-------PI~ 100 (227)
.++.++|+..+++.. ..... +.+.++.|||.++|.+|. |..+++-..++.+|++|+++ ||.
T Consensus 86 ~iL~~f~~~~~~v~~~~~~~~~~~~~~~~~plGISf~TF~~ia~l~e~~~~~~~~~~~~~fl~f~~yvsFfP~~isGPI~ 165 (425)
T COG1696 86 AILGIFKYFIFKVLPIAIFWGPLDIIGKILPLGISFYTFKSIAYLVEVRDGLIAEHIDWNFLRFLAYLSFFPTFISGPII 165 (425)
T ss_pred HHHHHHHHHHHhhhhhhccCCchhhhcccccceeEEEeeeeheehhhHhcCchHHhhhHHHHHHHHHHHHcchhhcCchh
Confidence 355677777665432 22333 566667899999999999 55553002689999877655 999
Q ss_pred ecCCCCCC--C--Cc----------chhHHHHHHHHHHHHHHHHH-HHhhcccchhch-hhHHHHHHHHHHHHHHHHHHH
Q 048121 101 IQNNNNPI--P--GA----------REGRLNYTIKGLLVAILVQL-QLAYEYSDYILS-VHPKLILLVYSLHMYFLLELI 164 (227)
Q Consensus 101 r~~~~~~q--~--~~----------~~~~~g~~~K~via~~l~~~-~~~~~~~~~~~~-~~~~~~~~~y~l~iY~dfsgy 164 (227)
|.++..+| + ++ .++.+|++||+++++.+... +.+++..+..++ .+.|.+++.|++|+|+||+||
T Consensus 166 r~~~f~~q~~~~~~~~~~~~~~~~~~~i~~G~lkK~iIa~~l~~~a~~~~~~~~~~~~~~~~~~~~~~y~~qlyfDFsGY 245 (425)
T COG1696 166 RFSRFVSQSKSPLPSFSPDLIALGAVLILLGFLKKEIIAYFLAIYAILVFGAFANYTVFTSAWLGMYAYNIQLYFDFSGY 245 (425)
T ss_pred HHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHcchhH
Confidence 99998877 1 11 36789999999999754432 334444333333 589999999999999999999
Q ss_pred HHHHHHHHHHHcCCCcCcCCCCccccCChhhHhhccchhhhhhhhhhhhcccchhh
Q 048121 165 LAASAAVARAMLGLELEPQFKKPHLSTSLQDFWGKRWNLMVTGILRPTVYKPSLHV 220 (227)
Q Consensus 165 ~d~a~g~a~~~lG~~l~~nF~~Py~s~Sl~dFWGrRWhisls~~lRdyVY~Pl~~~ 220 (227)
+|+|+|+|. ++|+++|||||+||.|+|++||| ||||+|+|+|+|||||+|+|..
T Consensus 246 sd~aig~a~-l~Gi~~PeNFn~P~~a~si~~FW-rRWHmSLS~W~rdYIyipLggs 299 (425)
T COG1696 246 SDFALGLAL-LFGIRLPENFNRPYLAKSIKDFW-RRWHMSLSTWFRDYIYIPLGGS 299 (425)
T ss_pred HHHHHHHHH-HcCCCCchhcccHHHHhhHHHHH-HHHHhhHHHHhhhheEeecCCc
Confidence 999999999 99999999999999999999999 9999999999999999999865
No 2
>PF03062 MBOAT: MBOAT, membrane-bound O-acyltransferase family; InterPro: IPR004299 The MBOAT (membrane bound O-acyl transferase) family of membrane proteins contains a variety of acyltransferase enzymes. A conserved histidine has been suggested to be the active site residue [].
Probab=99.69 E-value=6.1e-17 Score=144.31 Aligned_cols=152 Identities=24% Similarity=0.294 Sum_probs=110.0
Q ss_pred HHHHHHHHhhHhhcc--cC------------------------CCCCCCCCcchhhhhhhc-------cceecCCCCCC-
Q 048121 63 TWLANFKLLLFAFGL--GP------------------------LSSHPPISLPLFVIVSCL-------PIKIQNNNNPI- 108 (227)
Q Consensus 63 ~wl~tFk~l~~~~d~--g~------------------------l~~~p~~sl~~F~~~~~~-------PI~r~~~~~~q- 108 (227)
..+.|+|.+++++|. |. .. ...|+.+|..|..+ |+.++++..++
T Consensus 20 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ps~l~~l~Y~~~fp~~~~GP~~~y~~f~~~~ 97 (322)
T PF03062_consen 20 LMYLTLKLISYAFDYYDGKFYEESLSQDQKKIATLRLRSSKRKIK--KYPSLLEYLSYLFFFPTLLAGPILSYRDFLDFI 97 (322)
T ss_pred HHhHHHHHHHHHHHHHHccCCccchHHHHHHHHHHHhhccccccc--CCCCHHHHHHHHHHHHHHhcCchHHHHHHHHHH
Confidence 335789999999998 43 22 36788888887544 99998863322
Q ss_pred -----CCc-----------chhHHHHHHHHHHHHHHHHHH-Hhhcccch--------hchhhHHHHHHHHHHHHHHHHHH
Q 048121 109 -----PGA-----------REGRLNYTIKGLLVAILVQLQ-LAYEYSDY--------ILSVHPKLILLVYSLHMYFLLEL 163 (227)
Q Consensus 109 -----~~~-----------~~~~~g~~~K~via~~l~~~~-~~~~~~~~--------~~~~~~~~~~~~y~l~iY~dfsg 163 (227)
+.+ ..+.+|+++++++........ ......+. ......+.....+..+.|+|++|
T Consensus 98 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (322)
T PF03062_consen 98 RSRRFRWDPRQKSVFWRGLRLLFLGLFKKILIAYFLSFFPVNYLDSDEFWEKSLFLRLSLIYLWLFGFAYKYYLYFKFSG 177 (322)
T ss_pred hccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhccchhhcccccchhhHHHHHHHHHHHHHHHHHHHHh
Confidence 101 133456666666653322221 11111111 12234556677888999999999
Q ss_pred HHHHHHHHHHHHcCCC----cCcCCCCcc-ccCChhhHhhccchhhhhhhhhhhhcccch
Q 048121 164 ILAASAAVARAMLGLE----LEPQFKKPH-LSTSLQDFWGKRWNLMVTGILRPTVYKPSL 218 (227)
Q Consensus 164 y~d~a~g~a~~~lG~~----l~~nF~~Py-~s~Sl~dFWGrRWhisls~~lRdyVY~Pl~ 218 (227)
+.|+|.|.+. ++|++ .++||.+|+ .|+|.+||| |+||++++.|||+|||.|++
T Consensus 178 ~~~~a~~~~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~-r~WN~~v~~wL~~yVY~~~~ 235 (322)
T PF03062_consen 178 YWLFAEAAAI-LFGIGYDGFAPRNFYRCWENSTSFSDFW-RSWNISVHKWLKRYVYKPLG 235 (322)
T ss_pred ccHHHHHHHH-cCCccccccCCcCchhhhhhcCcHHHHH-HHhhhHHHHHHHHheeCcch
Confidence 9999999998 99999 999999998 999999999 99999999999999999995
No 3
>PF13813 MBOAT_2: Membrane bound O-acyl transferase family
Probab=98.90 E-value=3.1e-10 Score=84.14 Aligned_cols=42 Identities=31% Similarity=0.654 Sum_probs=39.1
Q ss_pred CcCCCCccccCChhhHhhccchhhhhhhhhhhhcccchhhhh
Q 048121 181 EPQFKKPHLSTSLQDFWGKRWNLMVTGILRPTVYKPSLHVFT 222 (227)
Q Consensus 181 ~~nF~~Py~s~Sl~dFWGrRWhisls~~lRdyVY~Pl~~~~~ 222 (227)
||.|++|+.|+|++||||||||+.+++.++...+.|++....
T Consensus 2 PplFg~~~~a~Slr~fWg~~WHq~~r~~~~~~~~~~~~~~~~ 43 (83)
T PF13813_consen 2 PPLFGSPWEAYSLRRFWGRRWHQLFRRPFSSIGYFPVRRVLG 43 (83)
T ss_pred CCccCCHHHHCcHHHHHhhHHHHHHHHHHHHHHHHHHHhccc
Confidence 899999999999999999999999999999999999876554
No 4
>PLN02332 membrane bound O-acyl transferase (MBOAT) family protein
Probab=98.60 E-value=4.2e-07 Score=87.00 Aligned_cols=31 Identities=29% Similarity=0.383 Sum_probs=29.4
Q ss_pred cccCChhhHhhccchhhhhhhhhhhhcccchh
Q 048121 188 HLSTSLQDFWGKRWNLMVTGILRPTVYKPSLH 219 (227)
Q Consensus 188 y~s~Sl~dFWGrRWhisls~~lRdyVY~Pl~~ 219 (227)
-.|+|++|+| ||||+++++|+|||||+|++.
T Consensus 307 E~~~s~~~~~-~~WNi~~~~Wl~~YvY~rl~~ 337 (465)
T PLN02332 307 ELAKSAVQIP-LVWNIQVSTWLRHYVYERLVP 337 (465)
T ss_pred EccCCHHHHH-HHccchHHHHHHHhEEeeCcc
Confidence 5699999999 999999999999999999975
No 5
>PLN02401 diacylglycerol o-acyltransferase
Probab=98.03 E-value=0.00039 Score=66.33 Aligned_cols=209 Identities=14% Similarity=0.265 Sum_probs=114.5
Q ss_pred HHHHHHHHHHHHHHHhhccccch--hHHHhHHHHHHHH--Hhhhhhhhhh--h--hchhhHHHHHHHHHHHHhhHhhc--
Q 048121 7 VWLSVTISLCYCHAIGKMVSKGI--KRLSCLIPVVCLF--LYLPLCLTSV--H--IGGTTAFFITWLANFKLLLFAFG-- 76 (227)
Q Consensus 7 v~~~~~~~~~y~~~i~~~~~~G~--~Rl~~l~Pv~~l~--~~lPl~~~~~--~--~~g~~aF~~~wl~tFk~l~~~~d-- 76 (227)
..+...+...-++.+-+.+.+|. .|+...+=++... ++.|...... + ..|.+.-+..-..-+|..||+.-
T Consensus 100 ~~~~~~~~~~~A~~iEk~~a~~~~~~~~~~~lh~~n~~~~l~~p~~~v~~~~~~~~sg~~l~~~~~i~~lK~~SY~~tN~ 179 (446)
T PLN02401 100 CCLSLPVFPLAAFLVEKLAYRKYISEPVVIFLHIIITTAEVLYPVLVILRCDSAVLSGVTLMLLACIVWLKLVSYAHTNY 179 (446)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhhheeEeCCCCcHHHHHHHHHHHHHHHHHHHHHHccH
Confidence 34444445556666666666554 3555544444322 3445443211 1 23333323233445899999871
Q ss_pred -c---------cCCC------CCC-CCCcchhhhhhhccceecCCCCCCCCc--chhHHHHHHHHHHHHH----HHH--H
Q 048121 77 -L---------GPLS------SHP-PISLPLFVIVSCLPIKIQNNNNPIPGA--REGRLNYTIKGLLVAI----LVQ--L 131 (227)
Q Consensus 77 -~---------g~l~------~~p-~~sl~~F~~~~~~PI~r~~~~~~q~~~--~~~~~g~~~K~via~~----l~~--~ 131 (227)
. +... +-| ..++-+|.-|...|-.-++.--|+++. +..+..-+.+++.... +.. .
T Consensus 180 d~r~~~~~~~~~~~~~~~~~~~yP~nitl~n~~yF~~~PTLvYq~~YPRT~~IRw~~v~~k~~e~~~~~~l~~~i~~q~i 259 (446)
T PLN02401 180 DMRALAKSIDKGEAPSTSANPEVSYDVTFKSLAYFMVAPTLCYQPSYPRSACIRKGWVVRQFVKLVIFTGFMGFIIEQYI 259 (446)
T ss_pred HHHHHhccccccccccccccCCCCCCCCHHHHHHHHhccceeccccCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 1 1000 011 457888888899999999988887432 1222211111111111 111 0
Q ss_pred HHhhcc-cchhch-----hh-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCcCCCCccccCChhhHhhcc
Q 048121 132 QLAYEY-SDYILS-----VH-----PKLILLVYSLHMYFLLELILAASAAVARAMLGLELEPQFKKPHLSTSLQDFWGKR 200 (227)
Q Consensus 132 ~~~~~~-~~~~~~-----~~-----~~~~~~~y~l~iY~dfsgy~d~a~g~a~~~lG~~l~~nF~~Py~s~Sl~dFWGrR 200 (227)
.++..+ .+.+.+ .+ ..-.++.|-+..|+-|+-.+++.+=+.+ +|=+ +=.+.=|.|+|..||| |.
T Consensus 260 ~P~~~ns~~~~~~~~~~~~er~lkLs~P~~~~wLl~Fy~ifh~~LN~~AEltr--FgDR--~FY~DWWNs~s~~eyw-R~ 334 (446)
T PLN02401 260 NPIVQNSQHPLKGNLLYAIERVLKLSVPNLYVWLCMFYCFFHLWLNILAELLR--FGDR--EFYKDWWNAKTVEEYW-RM 334 (446)
T ss_pred hhhHhhcccccchhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHh--hhhh--hhhhhhhccCcHHHHH-HH
Confidence 111211 111110 01 1124556777778888888777655544 3433 2234556799999999 99
Q ss_pred chhhhhhhhhhhhcccchhh
Q 048121 201 WNLMVTGILRPTVYKPSLHV 220 (227)
Q Consensus 201 Whisls~~lRdyVY~Pl~~~ 220 (227)
||+-+..|+..+||.|..++
T Consensus 335 WN~PVH~fL~RHVY~~~~~~ 354 (446)
T PLN02401 335 WNMPVHKWMVRHIYFPCLRN 354 (446)
T ss_pred cchHHHHHHHHHcChHhhhC
Confidence 99999999999999999764
No 6
>PLN03242 diacylglycerol o-acyltransferase; Provisional
Probab=97.59 E-value=0.0052 Score=58.25 Aligned_cols=128 Identities=19% Similarity=0.269 Sum_probs=77.1
Q ss_pred CCcchhhhhhhccceecCCCCCCCCc--chhHHHHHHHHHHH----HHHHH--HHHhhcc-cchhc-----hhh-----H
Q 048121 86 ISLPLFVIVSCLPIKIQNNNNPIPGA--REGRLNYTIKGLLV----AILVQ--LQLAYEY-SDYIL-----SVH-----P 146 (227)
Q Consensus 86 ~sl~~F~~~~~~PI~r~~~~~~q~~~--~~~~~g~~~K~via----~~l~~--~~~~~~~-~~~~~-----~~~-----~ 146 (227)
.++-+|.-|...|-.-+++--|+++. +..+..-+.+++.. ..+.+ ..++..+ .+... ..+ .
T Consensus 181 it~~n~~yF~~aPTL~Yq~~YPRT~~IRw~~v~~k~~~~~~~~~l~~~i~~q~i~P~~~ns~~~~~~~~~~~~er~lkL~ 260 (410)
T PLN03242 181 VTLKNIAYFMAAPTLCYQISYPRSPRIRTGWVLRQLGKLIVFNGFMGFIIAQYVNPILRNSVHPLKGNYLYAIERVLKLS 260 (410)
T ss_pred CCHHHHHHHHhccceeccccCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhcchhhcchHHHHHHHHHHh
Confidence 37888888889999999988887432 12221111111111 11111 0111111 11110 001 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCcCC-CCccccCChhhHhhccchhhhhhhhhhhhcccchh
Q 048121 147 KLILLVYSLHMYFLLELILAASAAVARAMLGLELEPQF-KKPHLSTSLQDFWGKRWNLMVTGILRPTVYKPSLH 219 (227)
Q Consensus 147 ~~~~~~y~l~iY~dfsgy~d~a~g~a~~~lG~~l~~nF-~~Py~s~Sl~dFWGrRWhisls~~lRdyVY~Pl~~ 219 (227)
.-.++.|-+..|+-|+-.+++.+=+.+ +|=+ +| +.=|.|+|..||| |.||+-+..|+..+||.|+.+
T Consensus 261 ~P~~~~~Ll~Fy~ifh~~LN~~AEltr--FgDR---~FY~DWWNs~s~~eyw-R~WN~PVH~fl~RHVY~p~~~ 328 (410)
T PLN03242 261 IPNLYVWLLMFYCFFHLWLNIVAELLC--FGDR---EFYKDWWNASEVSEYW-RLWNMPVHYWLVRHVYFPCLR 328 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--hhhh---hhhhhhhccCcHHHHH-HHcchHHHHHHHHHcChHhHh
Confidence 124556777788888888877665544 3433 44 4556799999999 999999999999999999975
No 7
>KOG3860 consensus Acyltransferase required for palmitoylation of Hedgehog (Hh) family of secreted signaling proteins [Signal transduction mechanisms]
Probab=96.28 E-value=0.0056 Score=59.04 Aligned_cols=75 Identities=13% Similarity=0.087 Sum_probs=48.3
Q ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHcCCCcCcCCCCccc-cCChhhHhhccchhhhhhhhhhhhcccchhhhhh
Q 048121 147 KLILLVYSLHM--YFLLELILAASAAVARAMLGLELEPQFKKPHL-STSLQDFWGKRWNLMVTGILRPTVYKPSLHVFTR 223 (227)
Q Consensus 147 ~~~~~~y~l~i--Y~dfsgy~d~a~g~a~~~lG~~l~~nF~~Py~-s~Sl~dFWGrRWhisls~~lRdyVY~Pl~~~~~~ 223 (227)
...+++|..-. |.-.-.-.-.-+..|. +=|++-|||--+=-. -.|-.+|| |-||-++.+|+-+|||+|+|..-++
T Consensus 285 ~~~~iay~~l~~~~LK~lvlfg~~~~~A~-lDgi~pPenmPrCI~~~ysy~~~W-R~fd~gfn~wLiryvYiplgGs~~~ 362 (494)
T KOG3860|consen 285 ESAGIAYFNLNFFWLKYLVLFGVFRLWAL-LDGIDPPENMPRCISNIYSYVFFW-RAFDRGFNKWLIRYVYIPLGGSRSS 362 (494)
T ss_pred HHhhhHHHHHHHHHHHHHHHhhHHHHHHH-hcCCCCCcccccHHHHHHHHHHHH-HHHHHHHHHHHHHHeeeccCCCccH
Confidence 34444444322 3333333334445554 669999997532211 23558999 9999999999999999999875443
No 8
>KOG0380 consensus Sterol O-acyltransferase/Diacylglycerol O-acyltransferase [Lipid transport and metabolism]
Probab=96.07 E-value=0.028 Score=54.86 Aligned_cols=130 Identities=23% Similarity=0.284 Sum_probs=79.0
Q ss_pred CCcchhhhhhhccceecCCCCCCCCc--chhHHHHHHHHHHH----HHHHHH--HHhh-cccchhch--h---h-----H
Q 048121 86 ISLPLFVIVSCLPIKIQNNNNPIPGA--REGRLNYTIKGLLV----AILVQL--QLAY-EYSDYILS--V---H-----P 146 (227)
Q Consensus 86 ~sl~~F~~~~~~PI~r~~~~~~q~~~--~~~~~g~~~K~via----~~l~~~--~~~~-~~~~~~~~--~---~-----~ 146 (227)
.++.+|.=|...|-.-+++--|++.. ++.+..-+.+++.. ..+++- .++. +..+...+ . . .
T Consensus 277 ~t~~~~lyFlf~PTLcYq~~yPRt~~iR~~yvl~k~~e~~g~~~l~~~i~~q~~vP~~~n~~~~~~~~~~~~~~~ll~l~ 356 (523)
T KOG0380|consen 277 LTLSNFLYFLFAPTLCYQLSYPRTARIRWRYVLEKFLELLGCIFLMVFIFQQWMVPVARNSKDPPFSDASRLIERLLKLM 356 (523)
T ss_pred ccHHHHHHHHhcchhcccccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhcccccchHHHHHHHHHHHh
Confidence 34567777788899999988777332 22222222222211 111111 1111 11111111 0 0 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCcCC-CCccccCChhhHhhccchhhhhhhhhhhhcccchhhh
Q 048121 147 KLILLVYSLHMYFLLELILAASAAVARAMLGLELEPQF-KKPHLSTSLQDFWGKRWNLMVTGILRPTVYKPSLHVF 221 (227)
Q Consensus 147 ~~~~~~y~l~iY~dfsgy~d~a~g~a~~~lG~~l~~nF-~~Py~s~Sl~dFWGrRWhisls~~lRdyVY~Pl~~~~ 221 (227)
.-++++|-+..|+-|...++..+=+-+ +- ..+| +.=|.|+|..||| |-||+-|..|+-.|||.|+.+..
T Consensus 357 iP~il~~Ll~FY~ifh~~LNa~AEl~r----Fa-DR~FY~DWWNs~s~~~f~-R~WN~PVH~wl~RHVY~p~~~~~ 426 (523)
T KOG0380|consen 357 IPGILIWLLFFYLIFHCWLNAVAELTR----FA-DREFYGDWWNSVSWDEFW-RTWNVPVHKWLYRHVYKPMLSRG 426 (523)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHH----hh-HHhHHHhhhccCcHHHHH-HHcCcHHHHHHHHHhhHHHHhcc
Confidence 124678888899999998887755543 22 2233 5557899999999 99999999999999999997644
No 9
>KOG2704 consensus Predicted membrane protein [Function unknown]
Probab=90.35 E-value=1.5 Score=42.36 Aligned_cols=31 Identities=29% Similarity=0.531 Sum_probs=28.9
Q ss_pred ccCChhhHhhccchhhhhhhhhhhhcccchhh
Q 048121 189 LSTSLQDFWGKRWNLMVTGILRPTVYKPSLHV 220 (227)
Q Consensus 189 ~s~Sl~dFWGrRWhisls~~lRdyVY~Pl~~~ 220 (227)
+|+|.+|.= --||+-.+.|||.+||+|+-+.
T Consensus 315 ~A~s~k~~l-~~WNi~T~~WLR~~vYeRv~k~ 345 (480)
T KOG2704|consen 315 LATSVKEML-DNWNIQTNKWLRRVVYERVEKK 345 (480)
T ss_pred HhhhHHHHH-hhcCccHHHHHHhheEEEcCCC
Confidence 799999999 9999999999999999999754
No 10
>COG5056 ARE1 Acyl-CoA cholesterol acyltransferase [Lipid metabolism]
Probab=86.80 E-value=0.95 Score=43.43 Aligned_cols=65 Identities=28% Similarity=0.502 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCcCC-CCccccCChhhHhhccchhhhhhhhhhhhcccchh
Q 048121 149 ILLVYSLHMYFLLELILAASAAVARAMLGLELEPQF-KKPHLSTSLQDFWGKRWNLMVTGILRPTVYKPSLH 219 (227)
Q Consensus 149 ~~~~y~l~iY~dfsgy~d~a~g~a~~~lG~~l~~nF-~~Py~s~Sl~dFWGrRWhisls~~lRdyVY~Pl~~ 219 (227)
.+++|-+..|.-|++.+|..+-+.+ ++ ..+| ..=|...|-.||| |-||..+.-||..-||-|...
T Consensus 363 fivlyll~FY~Ifd~iLN~vAEiTr--Fa---Dr~FYgdWWNcvsw~eFs-r~WNkPVh~fLlRHVYhssis 428 (512)
T COG5056 363 FIVLYLLFFYLIFDCILNAVAEITR--FA---DRYFYGDWWNCVSWDEFS-RIWNKPVHKFLLRHVYHSSIS 428 (512)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--Hh---hccchhhhhccccHHHHH-HHhCcHHHHHHHHHhhccccc
Confidence 4568889999999999999888876 11 2344 4456789999999 999999999999999999863
No 11
>KOG4312 consensus Predicted acyltransferase [General function prediction only]
Probab=63.35 E-value=1.4e+02 Score=28.38 Aligned_cols=149 Identities=19% Similarity=0.196 Sum_probs=76.3
Q ss_pred hchhhHHHHHHHHHHHHhhHhhcc---cCCCCCCCCCcchhhhhhhccceecCCCCC---------CCCc--chhHHHHH
Q 048121 54 IGGTTAFFITWLANFKLLLFAFGL---GPLSSHPPISLPLFVIVSCLPIKIQNNNNP---------IPGA--REGRLNYT 119 (227)
Q Consensus 54 ~~g~~aF~~~wl~tFk~l~~~~d~---g~l~~~p~~sl~~F~~~~~~PI~r~~~~~~---------q~~~--~~~~~g~~ 119 (227)
.+|+-- ..+-|+++..+|. |..+.. -.++..|.-|+-+|=...-.|-- |++. ...+.|+.
T Consensus 128 ~RGiqM-----iv~Mkl~slgFdL~~~g~~~~r-~p~p~~y~gYiYfp~tiifGPw~SF~~y~~~~~~r~~~~~~l~~~~ 201 (449)
T KOG4312|consen 128 IRGIQM-----IVIMKLTSLGFDLEKAGSNKFR-FPQPSSYVGYIYFPPTIIFGPWLSFEQYFKMRDKRWTGSENLLGFI 201 (449)
T ss_pred hhhhHH-----HHHHHHHHhhccccccCCcCcc-CCChHHhheehccCceeeeccchhHHHHHHHhcCCCcchHHHHHHH
Confidence 456542 3578999999987 555541 34455555555554433322211 1111 24456666
Q ss_pred HHHHHH--HHHHHH---HHhhcccchhchhhHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHcC--CC-----cCcCCC
Q 048121 120 IKGLLV--AILVQL---QLAYEYSDYILSVHPKLILLVYS--LHMYFLLELILAASAAVARAMLG--LE-----LEPQFK 185 (227)
Q Consensus 120 ~K~via--~~l~~~---~~~~~~~~~~~~~~~~~~~~~y~--l~iY~dfsgy~d~a~g~a~~~lG--~~-----l~~nF~ 185 (227)
...+++ +..... .-.++.-+ .-+.++..+.-+ ++.==-|-|.+.-|-.+ +.| .. ++|-=.
T Consensus 202 ~~~~lail~~i~s~cV~p~lf~fF~---~ss~fl~~y~~A~SfrfShYFVg~~tqA~~~---~~gdGatkEsDml~p~vs 275 (449)
T KOG4312|consen 202 IQSLLAILNAITSACVSPCLFEFFE---PSSQFLEDYLTAMSFRFSHYFVGLSTQAFVL---MLGDGATKESDMLVPVVS 275 (449)
T ss_pred HHHHHHHHHHHHHHhhhhHHHhhhC---chHHHHHHHHHHhhhhhhhhhHHHHHHHHHH---HcCCCcccccccchhhhc
Confidence 666655 111111 00122212 123444433322 22211123333333332 444 44 344444
Q ss_pred Cccc---cCChhhHhhccchhhhhhhhhhhhcc
Q 048121 186 KPHL---STSLQDFWGKRWNLMVTGILRPTVYK 215 (227)
Q Consensus 186 ~Py~---s~Sl~dFWGrRWhisls~~lRdyVY~ 215 (227)
+|+. .+|+.+-= +-||+..++|+++|||.
T Consensus 276 ~PlniE~pRS~~~~V-~sWN~Pmh~wL~~yifk 307 (449)
T KOG4312|consen 276 NPLNIEFPRSTLQTV-SSWNKPMHTWLHEYIFK 307 (449)
T ss_pred CceeccccHHHHHHH-HHcCCcHHHHHHHHHHH
Confidence 5553 67888888 89999999999999998
No 12
>COG4459 NapE Periplasmic nitrate reductase system, NapE component [Energy production and conversion]
Probab=26.88 E-value=1.5e+02 Score=20.86 Aligned_cols=43 Identities=28% Similarity=0.435 Sum_probs=24.1
Q ss_pred hccccchhHHHhHHHHHHHHHhhhhhhhhhhhchhhHHHHHHHHHHHH
Q 048121 23 KMVSKGIKRLSCLIPVVCLFLYLPLCLTSVHIGGTTAFFITWLANFKL 70 (227)
Q Consensus 23 ~~~~~G~~Rl~~l~Pv~~l~~~lPl~~~~~~~~g~~aF~~~wl~tFk~ 70 (227)
.+++|+.+|=....=.++.+.+.|+ -++.+.|..+| +.| -||+
T Consensus 10 ~~v~~~~~r~e~itFl~la~~l~Pi--lsV~~VG~yGF-iVW--M~Qi 52 (62)
T COG4459 10 AKVKPSEKRSEWITFLFLAFGLFPI--LSVAFVGGYGF-IVW--MFQI 52 (62)
T ss_pred ccCCcchhhhHHHHHHHHHHHHHHH--HHHHHhcchhH-HHH--HHHH
Confidence 5678898884333333334444453 34556666666 577 4555
No 13
>TIGR01710 typeII_sec_gspG general secretion pathway protein G. This model represents GspG, protein G of the main terminal branch of the general secretion pathway, also called type II secretion. It transports folded proteins across the bacterial outer membrane and is widely distributed in Gram-negative pathogens.
Probab=25.65 E-value=30 Score=27.44 Aligned_cols=26 Identities=27% Similarity=0.466 Sum_probs=20.9
Q ss_pred CCCcCcCCCCccccCChhhHhhccch
Q 048121 177 GLELEPQFKKPHLSTSLQDFWGKRWN 202 (227)
Q Consensus 177 G~~l~~nF~~Py~s~Sl~dFWGrRWh 202 (227)
+-..|.|++.||+.+..+|=||+.+.
T Consensus 75 ~~~~~~~w~~~yl~~~p~DPWg~~y~ 100 (134)
T TIGR01710 75 GEPLPKNWHGGYLEKVPQDPWGNPYQ 100 (134)
T ss_pred CCCCcccccccccccCCCCCCCCcce
Confidence 44577899999999999999985443
No 14
>PF01526 DDE_Tnp_Tn3: Tn3 transposase DDE domain; InterPro: IPR002513 Proteins containing this domain include transposases of Tn3, Tn21, Tn1721, Tn2501, Tn3926 transposons from Escherichia coli. The specific binding of the Tn3 transposase to DNA has been demonstrated. Sequence analysis has suggested that the invariant triad of Asp689, Asp765, Glu895 (numbering as in Tn3) may correspond to the D-D-35-E motif previously implicated in the catalytic performance of numerous transposases [].; GO: 0004803 transposase activity, 0006313 transposition, DNA-mediated
Probab=23.37 E-value=30 Score=32.76 Aligned_cols=30 Identities=17% Similarity=0.254 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCcCCCC
Q 048121 156 HMYFLLELILAASAAVARAMLGLELEPQFKK 186 (227)
Q Consensus 156 ~iY~dfsgy~d~a~g~a~~~lG~~l~~nF~~ 186 (227)
.+|.|-.||+|..-|++. ++|+++.|-++.
T Consensus 171 ~~~tDThG~s~~~Fal~~-llG~~f~PRi~~ 200 (388)
T PF01526_consen 171 EHYTDTHGYSDVVFALFH-LLGFRFAPRIRD 200 (388)
T ss_pred eeecCccchhhHHHHHHH-hcCCccccCccc
Confidence 469999999999999999 999999997753
Done!