Query 048121
Match_columns 227
No_of_seqs 232 out of 1098
Neff 6.1
Searched_HMMs 13730
Date Mon Mar 25 10:57:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048121.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/048121hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1r4pb_ b.40.2.1 (B:) Verotoxi 33.5 2.7 0.0002 27.1 -0.9 13 192-204 24-36 (70)
2 d1c4qa_ b.40.2.1 (A:) Verotoxi 28.4 3.8 0.00027 26.3 -0.9 13 192-204 25-37 (69)
3 d1or7c_ a.180.1.1 (C:) N-termi 9.3 38 0.0028 21.2 0.4 19 190-210 26-44 (66)
4 d1t92a_ d.24.1.3 (A:) Pullulan 8.9 43 0.0032 23.0 0.6 25 184-219 56-80 (108)
5 d1sdia_ a.198.1.1 (A:) Hypothe 7.3 46 0.0033 25.8 0.2 12 196-207 184-195 (213)
6 d1o98a2 c.76.1.3 (A:2-76,A:311 6.2 1.2E+02 0.0085 21.3 2.1 20 165-185 250-269 (275)
7 d1cjya2 c.19.1.2 (A:142-721) C 5.9 75 0.0055 28.0 0.8 10 191-200 148-157 (580)
8 d3cx5c1 f.32.1.1 (C:262-385) M 5.0 4.5E+02 0.033 17.7 4.7 62 16-77 15-81 (124)
9 d1hc8a_ a.4.7.1 (A:) Ribosomal 5.0 1.3E+02 0.0093 19.2 1.4 21 160-181 54-74 (74)
10 d1x3aa1 a.240.1.1 (A:8-94) Syn 4.8 81 0.0059 20.7 0.2 9 192-201 65-73 (87)
No 1
>d1r4pb_ b.40.2.1 (B:) Verotoxin-1/shiga-toxin, B-pentamer {Shigella dysenteriae, toxin II [TaxId: 622]}
Probab=33.54 E-value=2.7 Score=27.07 Aligned_cols=13 Identities=38% Similarity=1.135 Sum_probs=10.4
Q ss_pred ChhhHhhccchhh
Q 048121 192 SLQDFWGKRWNLM 204 (227)
Q Consensus 192 Sl~dFWGrRWhis 204 (227)
+=+|+|-.|||+-
T Consensus 24 agkeywtnrwnlq 36 (70)
T d1r4pb_ 24 DGKEYWTSRWNLQ 36 (70)
T ss_dssp TTEEEEECCTTHH
T ss_pred cCceeeccccchh
Confidence 3468999999974
No 2
>d1c4qa_ b.40.2.1 (A:) Verotoxin-1/shiga-toxin, B-pentamer {Escherichia coli [TaxId: 562]}
Probab=28.38 E-value=3.8 Score=26.31 Aligned_cols=13 Identities=23% Similarity=0.171 Sum_probs=10.5
Q ss_pred ChhhHhhccchhh
Q 048121 192 SLQDFWGKRWNLM 204 (227)
Q Consensus 192 Sl~dFWGrRWhis 204 (227)
+=+|+|-.|||+-
T Consensus 25 ~gkeywtnrwnlq 37 (69)
T d1c4qa_ 25 GDKELATNRANLQ 37 (69)
T ss_dssp TTEEEEECCTTHH
T ss_pred cCceehhcccchh
Confidence 4479999999974
No 3
>d1or7c_ a.180.1.1 (C:) N-terminal, cytoplasmic domain of anti-sigmaE factor RseA {Escherichia coli [TaxId: 562]}
Probab=9.28 E-value=38 Score=21.17 Aligned_cols=19 Identities=21% Similarity=0.660 Sum_probs=13.7
Q ss_pred cCChhhHhhccchhhhhhhhh
Q 048121 190 STSLQDFWGKRWNLMVTGILR 210 (227)
Q Consensus 190 s~Sl~dFWGrRWhisls~~lR 210 (227)
....++.| +|+|+. +..+|
T Consensus 26 d~e~~~~W-~~Yhli-~d~lr 44 (66)
T d1or7c_ 26 NPEMQKTW-ESYHLI-RDSMR 44 (66)
T ss_dssp CHHHHHHH-HHHHHH-HHHHH
T ss_pred CHHHHHHH-HHHHHH-HHHHh
Confidence 35688999 999986 44444
No 4
>d1t92a_ d.24.1.3 (A:) Pullulanase secretion protein PulG {Klebsiella pneumoniae [TaxId: 573]}
Probab=8.87 E-value=43 Score=22.95 Aligned_cols=25 Identities=16% Similarity=0.084 Sum_probs=20.8
Q ss_pred CCCccccCChhhHhhccchhhhhhhhhhhhcccchh
Q 048121 184 FKKPHLSTSLQDFWGKRWNLMVTGILRPTVYKPSLH 219 (227)
Q Consensus 184 F~~Py~s~Sl~dFWGrRWhisls~~lRdyVY~Pl~~ 219 (227)
.+.||+...+.|=|| ++|+|..-+.
T Consensus 56 ~~gpYl~~~p~DPWG-----------~~Y~Y~~pg~ 80 (108)
T d1t92a_ 56 PEGGYIRRLPQDPWG-----------SDYQLLSPGQ 80 (108)
T ss_dssp CTTTTSSSCCBCTTS-----------CBCEEECSCG
T ss_pred ccCCccccCCCCCCC-----------CceEEecCCC
Confidence 689999999999999 7888876543
No 5
>d1sdia_ a.198.1.1 (A:) Hypothetical protein YcfC {Escherichia coli [TaxId: 562]}
Probab=7.35 E-value=46 Score=25.82 Aligned_cols=12 Identities=33% Similarity=0.423 Sum_probs=8.5
Q ss_pred Hhhccchhhhhh
Q 048121 196 FWGKRWNLMVTG 207 (227)
Q Consensus 196 FWGrRWhisls~ 207 (227)
.=|+|||+.+++
T Consensus 184 ~GG~Rwqllf~R 195 (213)
T d1sdia_ 184 VGGGRLQLMFSR 195 (213)
T ss_dssp TTCCHHHHHHHH
T ss_pred hCCchhhHHhhH
Confidence 337889888763
No 6
>d1o98a2 c.76.1.3 (A:2-76,A:311-510) 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, catalytic domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=6.20 E-value=1.2e+02 Score=21.32 Aligned_cols=20 Identities=15% Similarity=0.232 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHcCCCcCcCCC
Q 048121 165 LAASAAVARAMLGLELEPQFK 185 (227)
Q Consensus 165 ~d~a~g~a~~~lG~~l~~nF~ 185 (227)
.|++.-+.. ++|++.|++.+
T Consensus 250 ~Di~PTil~-l~Gi~~P~~~~ 269 (275)
T d1o98a2 250 GDLAPTMLD-LLGLPQPKEMT 269 (275)
T ss_dssp GGHHHHHHH-HHTCCCCTTCC
T ss_pred eeHHHHHHH-HhCcCCCCCCc
Confidence 489999988 99999998753
No 7
>d1cjya2 c.19.1.2 (A:142-721) Cytosolic phospholipase A2 catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=5.86 E-value=75 Score=28.05 Aligned_cols=10 Identities=20% Similarity=0.527 Sum_probs=8.7
Q ss_pred CChhhHhhcc
Q 048121 191 TSLQDFWGKR 200 (227)
Q Consensus 191 ~Sl~dFWGrR 200 (227)
+|+.|+|||=
T Consensus 148 ~sltD~wg~~ 157 (580)
T d1cjya2 148 VTFTDIFGML 157 (580)
T ss_dssp CCHHHHHHHH
T ss_pred CchhhHHHHH
Confidence 8999999974
No 8
>d3cx5c1 f.32.1.1 (C:262-385) Mitochondrial cytochrome b subunit, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=5.04 E-value=4.5e+02 Score=17.69 Aligned_cols=62 Identities=21% Similarity=0.207 Sum_probs=38.1
Q ss_pred HHHHHHhhccccchhHHHhHHHHHHHHHhhhhhhhh-h---hhchh-hHHHHHHHHHHHHhhHhhcc
Q 048121 16 CYCHAIGKMVSKGIKRLSCLIPVVCLFLYLPLCLTS-V---HIGGT-TAFFITWLANFKLLLFAFGL 77 (227)
Q Consensus 16 ~y~~~i~~~~~~G~~Rl~~l~Pv~~l~~~lPl~~~~-~---~~~g~-~aF~~~wl~tFk~l~~~~d~ 77 (227)
...|.|-|.+|--..-.+++.-.++++..+|+.=.+ . ..+-. -.++..|..+|=.+.+.-.+
T Consensus 15 l~~YaiLRsiP~k~~Gvl~~~~si~il~~lP~l~~s~~~s~~~rp~~k~~fw~fv~~fi~LtwlG~~ 81 (124)
T d3cx5c1 15 LPFYAILRSIPDKLLGVITMFAAILVLLVLPFTDRSVVRGNTFKVLSKFFFFIFVFNFVLLGQIGAC 81 (124)
T ss_dssp HHHHHHHHTSSSHHHHHHHHHHHHHGGGGHHHHCCCSSSSSTTCHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHhhhhhhhcchhhHHHHHHHHHHHHHHHHHHhcCC
Confidence 456888888876556677777777777788875322 1 12211 12345566777777776554
No 9
>d1hc8a_ a.4.7.1 (A:) Ribosomal protein L11, C-terminal domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=4.99 E-value=1.3e+02 Score=19.19 Aligned_cols=21 Identities=24% Similarity=0.381 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHHHcCCCcC
Q 048121 160 LLELILAASAAVARAMLGLELE 181 (227)
Q Consensus 160 dfsgy~d~a~g~a~~~lG~~l~ 181 (227)
|++.-.-+.+|.|+ -+|++++
T Consensus 54 ~l~~a~k~v~GtAr-SMGI~Ve 74 (74)
T d1hc8a_ 54 SIEAAMRMIEGTAR-SMGIVVE 74 (74)
T ss_dssp SHHHHHHHHHHHHH-HHTEEEC
T ss_pred CHHHHHHHHHhhHh-hceEEeC
Confidence 66777788888888 8888754
No 10
>d1x3aa1 a.240.1.1 (A:8-94) Synapse associated protein 1, SYAP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.76 E-value=81 Score=20.73 Aligned_cols=9 Identities=22% Similarity=0.903 Sum_probs=5.8
Q ss_pred ChhhHhhccc
Q 048121 192 SLQDFWGKRW 201 (227)
Q Consensus 192 Sl~dFWGrRW 201 (227)
|=.+|| +|+
T Consensus 65 ~e~~FW-~rY 73 (87)
T d1x3aa1 65 KEEVFW-RNY 73 (87)
T ss_dssp CHHHHH-HHH
T ss_pred CHHHHH-HHH
Confidence 345888 665
Done!