Query 048125
Match_columns 258
No_of_seqs 130 out of 2194
Neff 10.9
Searched_HMMs 46136
Date Fri Mar 29 06:30:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048125.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/048125hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 7.3E-29 1.6E-33 226.7 15.3 236 2-247 98-334 (968)
2 PLN00113 leucine-rich repeat r 100.0 1.2E-28 2.6E-33 225.2 14.2 227 4-239 147-374 (968)
3 KOG4194 Membrane glycoprotein 99.9 5.9E-28 1.3E-32 196.7 1.6 254 1-258 153-428 (873)
4 KOG4194 Membrane glycoprotein 99.9 5.9E-28 1.3E-32 196.7 0.9 243 2-255 202-448 (873)
5 KOG0444 Cytoskeletal regulator 99.9 4.3E-24 9.3E-29 176.1 -5.5 247 2-257 108-373 (1255)
6 KOG0472 Leucine-rich repeat pr 99.9 1.3E-23 2.8E-28 164.6 -2.9 249 2-258 233-540 (565)
7 KOG0444 Cytoskeletal regulator 99.9 5.6E-24 1.2E-28 175.5 -6.3 216 2-232 131-373 (1255)
8 KOG0472 Leucine-rich repeat pr 99.8 1.7E-23 3.6E-28 164.0 -10.5 236 3-258 51-309 (565)
9 KOG4237 Extracellular matrix p 99.8 1.8E-22 3.9E-27 157.7 -5.6 247 2-258 72-358 (498)
10 PLN03210 Resistant to P. syrin 99.8 1.3E-18 2.9E-23 160.7 16.8 94 6-110 598-691 (1153)
11 KOG0618 Serine/threonine phosp 99.8 8.3E-22 1.8E-26 168.4 -5.0 241 2-257 246-487 (1081)
12 PLN03210 Resistant to P. syrin 99.8 6E-18 1.3E-22 156.4 16.6 237 2-257 616-904 (1153)
13 PRK15370 E3 ubiquitin-protein 99.8 6.9E-19 1.5E-23 153.8 8.3 227 3-258 184-427 (754)
14 cd00116 LRR_RI Leucine-rich re 99.8 4.6E-20 9.9E-25 149.0 0.4 252 2-258 3-290 (319)
15 PRK15387 E3 ubiquitin-protein 99.8 7.5E-18 1.6E-22 146.8 13.4 224 2-258 206-457 (788)
16 PRK15370 E3 ubiquitin-protein 99.7 5.1E-18 1.1E-22 148.4 9.6 203 22-257 178-399 (754)
17 cd00116 LRR_RI Leucine-rich re 99.7 6.6E-20 1.4E-24 148.0 -3.2 251 2-258 28-319 (319)
18 KOG0618 Serine/threonine phosp 99.7 1.1E-19 2.4E-24 155.6 -5.7 240 2-258 224-464 (1081)
19 KOG0617 Ras suppressor protein 99.7 1.6E-19 3.6E-24 126.4 -4.8 161 42-215 29-190 (264)
20 KOG0617 Ras suppressor protein 99.7 1.2E-18 2.6E-23 122.2 -4.2 165 65-243 29-194 (264)
21 KOG4237 Extracellular matrix p 99.7 1.1E-18 2.4E-23 136.8 -5.7 241 4-258 53-334 (498)
22 PRK15387 E3 ubiquitin-protein 99.7 9.1E-16 2E-20 134.0 11.3 210 2-241 227-465 (788)
23 KOG1909 Ran GTPase-activating 99.5 1.3E-15 2.9E-20 117.8 -2.0 234 21-258 29-310 (382)
24 KOG0532 Leucine-rich repeat (L 99.3 5.2E-14 1.1E-18 115.6 -4.3 169 50-234 79-247 (722)
25 KOG0532 Leucine-rich repeat (L 99.3 6.2E-14 1.4E-18 115.2 -4.7 212 3-232 56-271 (722)
26 KOG3207 Beta-tubulin folding c 99.3 4.8E-13 1E-17 106.7 0.0 209 20-234 119-339 (505)
27 KOG3207 Beta-tubulin folding c 99.3 3.8E-13 8.2E-18 107.3 -0.8 184 45-234 120-314 (505)
28 KOG1909 Ran GTPase-activating 99.3 6E-14 1.3E-18 108.8 -5.5 232 2-234 35-311 (382)
29 COG4886 Leucine-rich repeat (L 99.2 2E-11 4.3E-16 101.6 6.0 179 42-235 112-291 (394)
30 COG4886 Leucine-rich repeat (L 99.2 1.4E-11 3E-16 102.5 4.8 192 50-258 97-289 (394)
31 PF14580 LRR_9: Leucine-rich r 99.2 1.9E-11 4.2E-16 88.6 4.3 121 126-252 20-146 (175)
32 KOG1259 Nischarin, modulator o 99.2 9E-12 1.9E-16 95.5 1.5 126 126-258 285-411 (490)
33 PLN03150 hypothetical protein; 99.1 7.6E-11 1.7E-15 102.9 6.5 107 150-257 419-526 (623)
34 PF14580 LRR_9: Leucine-rich r 99.1 4.3E-11 9.4E-16 86.8 2.4 124 46-180 19-147 (175)
35 PF13855 LRR_8: Leucine rich r 99.1 2.8E-10 6.1E-15 68.2 5.1 59 150-208 2-60 (61)
36 PF13855 LRR_8: Leucine rich r 99.1 1.7E-10 3.7E-15 69.1 4.0 59 198-257 2-60 (61)
37 KOG1259 Nischarin, modulator o 99.0 7.6E-11 1.7E-15 90.4 1.3 190 39-235 207-413 (490)
38 PLN03150 hypothetical protein; 98.9 1.4E-09 3E-14 95.1 6.5 108 127-234 420-528 (623)
39 KOG2120 SCF ubiquitin ligase, 98.8 5.2E-11 1.1E-15 91.1 -7.3 194 23-224 186-390 (419)
40 KOG0531 Protein phosphatase 1, 98.7 7.3E-10 1.6E-14 92.6 -2.4 175 42-234 91-268 (414)
41 KOG0531 Protein phosphatase 1, 98.7 9.1E-10 2E-14 92.0 -2.7 173 21-210 94-268 (414)
42 KOG1859 Leucine-rich repeat pr 98.7 2.2E-10 4.8E-15 97.3 -7.6 126 126-258 165-291 (1096)
43 KOG4658 Apoptotic ATPase [Sign 98.6 2.5E-08 5.4E-13 89.7 4.1 92 12-110 561-652 (889)
44 KOG2982 Uncharacterized conser 98.6 9.2E-09 2E-13 79.0 1.2 184 44-235 69-263 (418)
45 KOG2982 Uncharacterized conser 98.6 8E-09 1.7E-13 79.3 0.4 210 42-258 41-261 (418)
46 KOG2120 SCF ubiquitin ligase, 98.6 3.5E-10 7.5E-15 86.7 -8.1 177 47-232 186-374 (419)
47 KOG4658 Apoptotic ATPase [Sign 98.6 2.6E-08 5.7E-13 89.5 2.1 104 21-133 544-650 (889)
48 KOG1859 Leucine-rich repeat pr 98.5 1E-09 2.2E-14 93.5 -7.1 153 93-257 102-265 (1096)
49 COG5238 RNA1 Ran GTPase-activa 98.4 1.2E-08 2.6E-13 77.5 -2.5 44 66-112 89-132 (388)
50 COG5238 RNA1 Ran GTPase-activa 98.3 9.3E-08 2E-12 72.7 -1.4 228 2-234 35-316 (388)
51 KOG1644 U2-associated snRNP A' 98.2 2.6E-06 5.7E-11 62.1 5.7 128 103-234 22-153 (233)
52 KOG1644 U2-associated snRNP A' 98.2 3.4E-06 7.3E-11 61.6 5.3 107 69-185 42-152 (233)
53 PF12799 LRR_4: Leucine Rich r 98.2 2E-06 4.2E-11 47.4 2.7 36 198-234 2-37 (44)
54 KOG4579 Leucine-rich repeat (L 98.1 8.2E-08 1.8E-12 65.5 -3.7 108 127-239 29-140 (177)
55 KOG4579 Leucine-rich repeat (L 98.1 1.1E-07 2.3E-12 65.0 -3.9 84 100-186 53-136 (177)
56 PF12799 LRR_4: Leucine Rich r 98.0 4.7E-06 1E-10 45.8 2.7 36 221-258 1-36 (44)
57 KOG3665 ZYG-1-like serine/thre 98.0 9.5E-07 2.1E-11 77.8 -0.6 135 100-236 122-265 (699)
58 PF13306 LRR_5: Leucine rich r 97.9 8.8E-05 1.9E-09 51.4 8.0 100 126-230 13-112 (129)
59 PRK15386 type III secretion pr 97.9 7.2E-05 1.6E-09 61.5 8.3 137 66-231 49-187 (426)
60 PF13306 LRR_5: Leucine rich r 97.8 0.00016 3.4E-09 50.1 8.0 121 96-223 8-128 (129)
61 KOG4341 F-box protein containi 97.8 8.5E-07 1.8E-11 71.3 -4.7 47 12-58 180-228 (483)
62 KOG4341 F-box protein containi 97.8 7.2E-07 1.6E-11 71.7 -5.1 67 14-80 156-227 (483)
63 PRK15386 type III secretion pr 97.8 0.00033 7.1E-09 57.7 9.9 53 21-79 51-104 (426)
64 KOG3665 ZYG-1-like serine/thre 97.7 1.9E-05 4.2E-10 69.7 2.5 90 16-112 142-232 (699)
65 KOG1947 Leucine rich repeat pr 97.6 3.2E-06 7E-11 72.2 -4.5 112 20-137 186-307 (482)
66 KOG2739 Leucine-rich acidic nu 97.2 0.00021 4.6E-09 54.4 2.0 100 149-253 43-150 (260)
67 KOG2739 Leucine-rich acidic nu 97.1 0.00024 5.2E-09 54.1 1.3 105 21-133 42-151 (260)
68 KOG1947 Leucine rich repeat pr 96.9 4.9E-05 1.1E-09 64.9 -4.2 115 44-161 186-307 (482)
69 KOG2123 Uncharacterized conser 96.6 4.8E-05 1E-09 58.5 -5.2 82 99-185 18-100 (388)
70 KOG2123 Uncharacterized conser 96.5 9.4E-05 2E-09 57.0 -4.4 86 21-115 18-103 (388)
71 KOG4308 LRR-containing protein 95.9 1.6E-05 3.5E-10 67.3 -12.6 183 71-257 89-301 (478)
72 PF00560 LRR_1: Leucine Rich R 95.8 0.0054 1.2E-07 28.0 1.2 18 223-241 2-19 (22)
73 KOG3864 Uncharacterized conser 94.8 0.0029 6.2E-08 46.6 -2.3 81 150-230 102-185 (221)
74 KOG3864 Uncharacterized conser 94.7 0.0047 1E-07 45.5 -1.4 84 126-209 102-188 (221)
75 PF13504 LRR_7: Leucine rich r 94.4 0.028 6E-07 23.8 1.3 13 222-234 2-14 (17)
76 KOG4308 LRR-containing protein 94.3 0.0001 2.2E-09 62.5 -12.3 38 197-234 262-303 (478)
77 KOG0473 Leucine-rich repeat pr 93.0 0.0024 5.1E-08 48.2 -5.5 86 146-234 39-124 (326)
78 PF13516 LRR_6: Leucine Rich r 91.6 0.042 9E-07 25.5 -0.4 14 221-234 2-15 (24)
79 smart00369 LRR_TYP Leucine-ric 91.3 0.17 3.6E-06 23.9 1.6 18 221-239 2-19 (26)
80 smart00370 LRR Leucine-rich re 91.3 0.17 3.6E-06 23.9 1.6 18 221-239 2-19 (26)
81 smart00368 LRR_RI Leucine rich 84.7 0.75 1.6E-05 22.2 1.5 13 245-258 2-14 (28)
82 KOG0473 Leucine-rich repeat pr 84.0 0.035 7.5E-07 42.2 -5.0 83 125-210 42-124 (326)
83 KOG3763 mRNA export factor TAP 80.5 0.84 1.8E-05 39.2 1.2 92 15-106 211-307 (585)
84 smart00367 LRR_CC Leucine-rich 78.9 0.69 1.5E-05 21.8 0.1 16 21-36 1-17 (26)
85 smart00364 LRR_BAC Leucine-ric 76.3 1.9 4.1E-05 20.5 1.2 18 221-239 2-19 (26)
86 smart00365 LRR_SD22 Leucine-ri 74.3 2.9 6.2E-05 19.8 1.6 14 221-234 2-15 (26)
87 KOG3763 mRNA export factor TAP 73.0 1.8 3.8E-05 37.4 1.1 63 171-235 216-284 (585)
88 KOG4242 Predicted myosin-I-bin 44.5 50 0.0011 28.5 4.7 34 223-257 415-451 (553)
89 TIGR00864 PCC polycystin catio 23.4 69 0.0015 34.1 2.7 32 3-35 1-32 (2740)
90 PF05725 FNIP: FNIP Repeat; I 22.0 1.4E+02 0.0031 15.8 3.1 6 151-156 14-19 (44)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.96 E-value=7.3e-29 Score=226.70 Aligned_cols=236 Identities=37% Similarity=0.581 Sum_probs=99.7
Q ss_pred CCCCcCcccCCCCcchhccCCCCceEEecCCcccccccccccCCCCCcEEEeecccCCCCCCC-ccccCCcceEEecccc
Q 048125 2 FDFPFNQLQGSLPSDLGFTLPNLEGLNLAGNQFTGPIPVSISNASNLRELMIGKNGFSGKVPS-LENLHKLQRVIISQNH 80 (258)
Q Consensus 2 l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~-~~~l~~L~~L~l~~~~ 80 (258)
|++++|.+++.+|..++.++.+|++|++++|.+++..|. ..+++|++|++++|.+....+. +..+++|++|++++|.
T Consensus 98 L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~ 175 (968)
T PLN00113 98 INLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNV 175 (968)
T ss_pred EECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCc
Confidence 344555555555555444455555555555544433332 2234444444444444322222 4445555555555554
Q ss_pred ccCcCCCccchhhhccccCCCCcEEEeecccccccccccccccccccceEEecccccCCccCccCCCCCcccEEEeeCCc
Q 048125 81 LGNYGEKDNLEFVNSLVNASRLELLQISDNNFGGMLPEAVGNFSTRLGILSVAENQLFGNIPSGLRNLVNLELLDLSGNQ 160 (258)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~ 160 (258)
+.. ..+..+..+++|++|++++|.+.+.+|..+..+ .+|+.|++++|.+....|..++.+++|++|++++|.
T Consensus 176 l~~-------~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l-~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~ 247 (968)
T PLN00113 176 LVG-------KIPNSLTNLTSLEFLTLASNQLVGQIPRELGQM-KSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNN 247 (968)
T ss_pred ccc-------cCChhhhhCcCCCeeeccCCCCcCcCChHHcCc-CCccEEECcCCccCCcCChhHhcCCCCCEEECcCce
Confidence 432 222333444444444444444443344333333 244444444444433334444444444444444444
Q ss_pred cccccCCcccCccCCcEEEecCCccccccCCCCCCCCCcceEecccccccccCCcccccCcCCcEEeccCCccccccccc
Q 048125 161 FTSRIPGSIGDLQKLQMLGLNGNKFLGEIPSSIGNLTLLMTLNFAENMLEGSIPSSLGKCQNLIVLDLYNNNLSGTIPSE 240 (258)
Q Consensus 161 ~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~ 240 (258)
+.+..|..+..+++|++|++++|.+.+..|..+..+++|+.|++++|.+.+.+|..+..+++|+.|++++|.+.+.+|..
T Consensus 248 l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~ 327 (968)
T PLN00113 248 LTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVA 327 (968)
T ss_pred eccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChh
Confidence 43333334444444444444444443333333333344444444444333333333333333333333333333333333
Q ss_pred cccccCc
Q 048125 241 VIGLSSL 247 (258)
Q Consensus 241 ~~~~~~l 247 (258)
+..++++
T Consensus 328 ~~~l~~L 334 (968)
T PLN00113 328 LTSLPRL 334 (968)
T ss_pred HhcCCCC
Confidence 3333333
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.96 E-value=1.2e-28 Score=225.25 Aligned_cols=227 Identities=36% Similarity=0.603 Sum_probs=96.0
Q ss_pred CCcCcccCCCCcchhccCCCCceEEecCCcccccccccccCCCCCcEEEeecccCCCCCCC-ccccCCcceEEecccccc
Q 048125 4 FPFNQLQGSLPSDLGFTLPNLEGLNLAGNQFTGPIPVSISNASNLRELMIGKNGFSGKVPS-LENLHKLQRVIISQNHLG 82 (258)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~ 82 (258)
+++|.+++.+|..+. ++++|++|++.+|.+.+..|..+.++++|++|++++|.+....+. +..+++|+.|++++|.+.
T Consensus 147 Ls~n~~~~~~p~~~~-~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~ 225 (968)
T PLN00113 147 LSNNMLSGEIPNDIG-SFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLS 225 (968)
T ss_pred CcCCcccccCChHHh-cCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccC
Confidence 333333333343333 244444444444444434444444444444444444443322221 344444444444444433
Q ss_pred CcCCCccchhhhccccCCCCcEEEeecccccccccccccccccccceEEecccccCCccCccCCCCCcccEEEeeCCccc
Q 048125 83 NYGEKDNLEFVNSLVNASRLELLQISDNNFGGMLPEAVGNFSTRLGILSVAENQLFGNIPSGLRNLVNLELLDLSGNQFT 162 (258)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~ 162 (258)
. ..+..+..+++|++|++++|.+.+..|..+..+ ++|+.|++++|.+....|..+..+++|++|++++|.+.
T Consensus 226 ~-------~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l-~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~ 297 (968)
T PLN00113 226 G-------EIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNL-KNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLS 297 (968)
T ss_pred C-------cCChhHhcCCCCCEEECcCceeccccChhHhCC-CCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeec
Confidence 2 222233444444444444444443444433333 24444444444443333444444444444444444444
Q ss_pred cccCCcccCccCCcEEEecCCccccccCCCCCCCCCcceEecccccccccCCcccccCcCCcEEeccCCcccccccc
Q 048125 163 SRIPGSIGDLQKLQMLGLNGNKFLGEIPSSIGNLTLLMTLNFAENMLEGSIPSSLGKCQNLIVLDLYNNNLSGTIPS 239 (258)
Q Consensus 163 ~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~ 239 (258)
+..|..+..+++|++|++++|.+.+..|..+..+++|+.|++++|.+.+..|..++.+++|+.+++++|++.+.+|.
T Consensus 298 ~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~ 374 (968)
T PLN00113 298 GEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPE 374 (968)
T ss_pred cCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCCh
Confidence 33444444444444444444444434444444444444444444444444444444444444444444444433333
No 3
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.94 E-value=5.9e-28 Score=196.70 Aligned_cols=254 Identities=23% Similarity=0.232 Sum_probs=186.7
Q ss_pred CCCCCcCcccCCCCcchhccCCCCceEEecCCcccccccccccCCCCCcEEEeecccCCCCCCC-ccccCCcceEEeccc
Q 048125 1 DFDFPFNQLQGSLPSDLGFTLPNLEGLNLAGNQFTGPIPVSISNASNLRELMIGKNGFSGKVPS-LENLHKLQRVIISQN 79 (258)
Q Consensus 1 ~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~-~~~l~~L~~L~l~~~ 79 (258)
.||++.|.++ ++|...+..-.++++|++.+|.|+.....+|.++..|..|.++.|.++..+.. |..+++|+.|.|..|
T Consensus 153 slDLSrN~is-~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN 231 (873)
T KOG4194|consen 153 SLDLSRNLIS-EIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRN 231 (873)
T ss_pred hhhhhhchhh-cccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhcccc
Confidence 3678888888 88887777678899999999999988888888888999999999998887776 666888888888888
Q ss_pred cccCcCCCccc----------------h-hhhccccCCCCcEEEeecccccccccccccccccccceEEecccccCCccC
Q 048125 80 HLGNYGEKDNL----------------E-FVNSLVNASRLELLQISDNNFGGMLPEAVGNFSTRLGILSVAENQLFGNIP 142 (258)
Q Consensus 80 ~~~~~~~~~~~----------------~-~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~~~~ 142 (258)
.+.-....+.. + ..-.|..+.++++|+++.|++.......++.+ ++|+.|+++.|.+..+.+
T Consensus 232 ~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgL-t~L~~L~lS~NaI~rih~ 310 (873)
T KOG4194|consen 232 RIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGL-TSLEQLDLSYNAIQRIHI 310 (873)
T ss_pred ceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhccccccc-chhhhhccchhhhheeec
Confidence 77643221000 0 00134455556666666665552222233333 567777777777766666
Q ss_pred ccCCCCCcccEEEeeCCccccccCCcccCccCCcEEEecCCccccccCCCCCCCCCcceEecccccccccCC---ccccc
Q 048125 143 SGLRNLVNLELLDLSGNQFTSRIPGSIGDLQKLQMLGLNGNKFLGEIPSSIGNLTLLMTLNFAENMLEGSIP---SSLGK 219 (258)
Q Consensus 143 ~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~---~~~~~ 219 (258)
....-.++|++|++++|.++...++.|..+..|+.|.+++|.+...-..+|..+++|++||++.|.++..+. ..+.+
T Consensus 311 d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~g 390 (873)
T KOG4194|consen 311 DSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNG 390 (873)
T ss_pred chhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhcc
Confidence 666667788888888888877777778888888888888888775555678888889999999988764333 34566
Q ss_pred CcCCcEEeccCCccccccc-cccccccCcceeEecCCCCC
Q 048125 220 CQNLIVLDLYNNNLSGTIP-SEVIGLSSLSIYLDLSQNQL 258 (258)
Q Consensus 220 ~~~L~~L~l~~~~l~~~~~-~~~~~~~~l~~~L~l~~n~~ 258 (258)
+++|+.|.+.||+|+ .++ .+|..+++| ++|||.+|.|
T Consensus 391 l~~LrkL~l~gNqlk-~I~krAfsgl~~L-E~LdL~~Nai 428 (873)
T KOG4194|consen 391 LPSLRKLRLTGNQLK-SIPKRAFSGLEAL-EHLDLGDNAI 428 (873)
T ss_pred chhhhheeecCceee-ecchhhhccCccc-ceecCCCCcc
Confidence 899999999999999 555 688999999 9999999875
No 4
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.94 E-value=5.9e-28 Score=196.69 Aligned_cols=243 Identities=23% Similarity=0.270 Sum_probs=186.6
Q ss_pred CCCCcCcccCCCCcchhccCCCCceEEecCCcccccccccccCCCCCcEEEeecccCCCCCCC-ccccCCcceEEecccc
Q 048125 2 FDFPFNQLQGSLPSDLGFTLPNLEGLNLAGNQFTGPIPVSISNASNLRELMIGKNGFSGKVPS-LENLHKLQRVIISQNH 80 (258)
Q Consensus 2 l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~-~~~l~~L~~L~l~~~~ 80 (258)
|.++.|.++ .+|...+.++++|+.|++..|.+.-+..-.|.+++.|+.|.+..|++...... |.++.++++|+|..|.
T Consensus 202 lkLsrNrit-tLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~ 280 (873)
T KOG4194|consen 202 LKLSRNRIT-TLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNR 280 (873)
T ss_pred eecccCccc-ccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccch
Confidence 445555665 56666555566666666666655533344555666666666666666554443 6666677777777776
Q ss_pred ccCcCCCccchhhhccccCCCCcEEEeecccccccccccccccccccceEEecccccCCccCccCCCCCcccEEEeeCCc
Q 048125 81 LGNYGEKDNLEFVNSLVNASRLELLQISDNNFGGMLPEAVGNFSTRLGILSVAENQLFGNIPSGLRNLVNLELLDLSGNQ 160 (258)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~ 160 (258)
+..... .-+.+++.|+.|+++.|.+...-++.|... ++|+.|++++|.+.+..+..|..+.+|++|.++.|.
T Consensus 281 l~~vn~-------g~lfgLt~L~~L~lS~NaI~rih~d~Wsft-qkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Ns 352 (873)
T KOG4194|consen 281 LQAVNE-------GWLFGLTSLEQLDLSYNAIQRIHIDSWSFT-QKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNS 352 (873)
T ss_pred hhhhhc-------ccccccchhhhhccchhhhheeecchhhhc-ccceeEeccccccccCChhHHHHHHHhhhhcccccc
Confidence 654321 246688999999999999986666666554 589999999999997778889999999999999999
Q ss_pred cccccCCcccCccCCcEEEecCCcccccc---CCCCCCCCCcceEecccccccccCCcccccCcCCcEEeccCCcccccc
Q 048125 161 FTSRIPGSIGDLQKLQMLGLNGNKFLGEI---PSSIGNLTLLMTLNFAENMLEGSIPSSLGKCQNLIVLDLYNNNLSGTI 237 (258)
Q Consensus 161 ~~~~~~~~~~~~~~L~~L~l~~~~~~~~~---~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~ 237 (258)
++.....+|..+.+|+.|++..|.+...+ ...|..++.|+.|++.||++.......+.+++.|++|++.+|.|.+.-
T Consensus 353 i~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq 432 (873)
T KOG4194|consen 353 IDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQ 432 (873)
T ss_pred hHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeec
Confidence 99888889999999999999999987644 345788999999999999998677788999999999999999999888
Q ss_pred ccccccccCcceeEecCC
Q 048125 238 PSEVIGLSSLSIYLDLSQ 255 (258)
Q Consensus 238 ~~~~~~~~~l~~~L~l~~ 255 (258)
+.+|..+ .| .+|.++.
T Consensus 433 ~nAFe~m-~L-k~Lv~nS 448 (873)
T KOG4194|consen 433 PNAFEPM-EL-KELVMNS 448 (873)
T ss_pred ccccccc-hh-hhhhhcc
Confidence 8888888 77 7776653
No 5
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.86 E-value=4.3e-24 Score=176.15 Aligned_cols=247 Identities=31% Similarity=0.411 Sum_probs=134.2
Q ss_pred CCCCcCcccCCCCcchhccCCCCceEEecCCcccccccccccCCCCCcEEEeecccCCCCCCCccccCCcceEEeccccc
Q 048125 2 FDFPFNQLQGSLPSDLGFTLPNLEGLNLAGNQFTGPIPVSISNASNLRELMIGKNGFSGKVPSLENLHKLQRVIISQNHL 81 (258)
Q Consensus 2 l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~L~~L~l~~~~~ 81 (258)
||+++|.++ ++|..+-. ..++-.|++++|+|..+...-|.++.-|-.|++++|.+...++....+..|+.|.+++|.+
T Consensus 108 lDLShNqL~-EvP~~LE~-AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe~LPPQ~RRL~~LqtL~Ls~NPL 185 (1255)
T KOG0444|consen 108 LDLSHNQLR-EVPTNLEY-AKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLEMLPPQIRRLSMLQTLKLSNNPL 185 (1255)
T ss_pred eecchhhhh-hcchhhhh-hcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhhhcCHHHHHHhhhhhhhcCCChh
Confidence 455666666 56665553 5556666666666654333334455555566666666666666566666666666666654
Q ss_pred cCcCCC------------------ccchhhhccccCCCCcEEEeecccccccccccccccccccceEEecccccCCccCc
Q 048125 82 GNYGEK------------------DNLEFVNSLVNASRLELLQISDNNFGGMLPEAVGNFSTRLGILSVAENQLFGNIPS 143 (258)
Q Consensus 82 ~~~~~~------------------~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~~~~~ 143 (258)
..+.-. ....++.++-.+.+|+.++++.|++. .+|+.+..+ ++|+.|++++|+++ .+.-
T Consensus 186 ~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l-~~LrrLNLS~N~it-eL~~ 262 (1255)
T KOG0444|consen 186 NHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKL-RNLRRLNLSGNKIT-ELNM 262 (1255)
T ss_pred hHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhh-hhhheeccCcCcee-eeec
Confidence 332100 00123333444445555555555554 445544444 25555555555554 2222
Q ss_pred cCCCCCcccEEEeeCCccccccCCcccCccCCcEEEecCCccc-cccCCCCCCCCCcceEecccccccccCCcccccCcC
Q 048125 144 GLRNLVNLELLDLSGNQFTSRIPGSIGDLQKLQMLGLNGNKFL-GEIPSSIGNLTLLMTLNFAENMLEGSIPSSLGKCQN 222 (258)
Q Consensus 144 ~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~-~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~ 222 (258)
....+.++++|+++.|.++ ..|.++..++.|+.|.+.+|+++ +-+|..++.+.+|+.+..++|.+. ..|..++.|..
T Consensus 263 ~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~k 340 (1255)
T KOG0444|consen 263 TEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVK 340 (1255)
T ss_pred cHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHH
Confidence 2334445555555555555 45555555555665555555543 134555555666666666666554 55666666666
Q ss_pred CcEEeccCCccccccccccccccCcceeEecCCCC
Q 048125 223 LIVLDLYNNNLSGTIPSEVIGLSSLSIYLDLSQNQ 257 (258)
Q Consensus 223 L~~L~l~~~~l~~~~~~~~~~~~~l~~~L~l~~n~ 257 (258)
|+.|.+..|++- .+|.++--++.+ ..||+..|+
T Consensus 341 L~kL~L~~NrLi-TLPeaIHlL~~l-~vLDlreNp 373 (1255)
T KOG0444|consen 341 LQKLKLDHNRLI-TLPEAIHLLPDL-KVLDLRENP 373 (1255)
T ss_pred HHHhccccccee-echhhhhhcCCc-ceeeccCCc
Confidence 666666666665 566666666666 666666554
No 6
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.86 E-value=1.3e-23 Score=164.58 Aligned_cols=249 Identities=29% Similarity=0.391 Sum_probs=192.0
Q ss_pred CCCCcCcccCCCCcchhccCCCCceEEecCCcccccccccccCCCCCcEEEeecccCCCCCCCccccCCcceEEeccccc
Q 048125 2 FDFPFNQLQGSLPSDLGFTLPNLEGLNLAGNQFTGPIPVSISNASNLRELMIGKNGFSGKVPSLENLHKLQRVIISQNHL 81 (258)
Q Consensus 2 l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~L~~L~l~~~~~ 81 (258)
|.+..|+++ .+|+.++.+++.+..|+++.++++ ..|+.++.++.|++|++++|.++..+..++.+ .|+.|-+.+|.+
T Consensus 233 lh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is~Lp~sLgnl-hL~~L~leGNPl 309 (565)
T KOG0472|consen 233 LHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPL 309 (565)
T ss_pred HHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCccccCCcccccc-eeeehhhcCCch
Confidence 345667777 888888888999999999999988 68888888999999999999999988888888 899999988854
Q ss_pred cCcC-----------------------------CCc-c----chhhhccccCCCCcEEEeeccccccccccccccccc--
Q 048125 82 GNYG-----------------------------EKD-N----LEFVNSLVNASRLELLQISDNNFGGMLPEAVGNFST-- 125 (258)
Q Consensus 82 ~~~~-----------------------------~~~-~----~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~-- 125 (258)
..+- ..+ . -.........-+.+.|++++-.++ .+|..++....
T Consensus 310 rTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~ 388 (565)
T KOG0472|consen 310 RTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSE 388 (565)
T ss_pred HHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccc-cCCHHHHHHhhhc
Confidence 3220 000 0 001112233345666777766666 56665554431
Q ss_pred ccceEEecccccC-----------------------CccCccCCCCCcccEEEeeCCccccccCCcccCccCCcEEEecC
Q 048125 126 RLGILSVAENQLF-----------------------GNIPSGLRNLVNLELLDLSGNQFTSRIPGSIGDLQKLQMLGLNG 182 (258)
Q Consensus 126 ~l~~L~l~~~~~~-----------------------~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~ 182 (258)
-+..++++.|++. ...|..+..++++..|++++|.+. ..|..+..+-.|+.++++.
T Consensus 389 ~Vt~VnfskNqL~elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~ 467 (565)
T KOG0472|consen 389 IVTSVNFSKNQLCELPKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSF 467 (565)
T ss_pred ceEEEecccchHhhhhhhhHHHHHHHHHHHhhcCccccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccc
Confidence 1566666666532 134444556788999999998887 6787888888899999999
Q ss_pred CccccccCCCCCCCCCcceEecccccccccCCcccccCcCCcEEeccCCccccccccccccccCcceeEecCCCCC
Q 048125 183 NKFLGEIPSSIGNLTLLMTLNFAENMLEGSIPSSLGKCQNLIVLDLYNNNLSGTIPSEVIGLSSLSIYLDLSQNQL 258 (258)
Q Consensus 183 ~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~l~~~L~l~~n~~ 258 (258)
|+++ .+|+.+.....++++..++|++....+..+..+.+|..|++.+|.+. .+|..+..+.++ ++|+++||||
T Consensus 468 NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL-~hLeL~gNpf 540 (565)
T KOG0472|consen 468 NRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNL-RHLELDGNPF 540 (565)
T ss_pred cccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhccccce-eEEEecCCcc
Confidence 9888 88888888888999999999998666677899999999999999999 899999999999 9999999997
No 7
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.85 E-value=5.6e-24 Score=175.48 Aligned_cols=216 Identities=28% Similarity=0.434 Sum_probs=178.1
Q ss_pred CCCCcCcccCCCCcchhccCCCCceEEecCCcccccccccccCCCCCcEEEeecccCCC---------------------
Q 048125 2 FDFPFNQLQGSLPSDLGFTLPNLEGLNLAGNQFTGPIPVSISNASNLRELMIGKNGFSG--------------------- 60 (258)
Q Consensus 2 l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~--------------------- 60 (258)
|++++|++. +||...+.++..|-.|++++|.+. .+|..+..+.+|+.|++++|++..
T Consensus 131 LNLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~Tq 208 (1255)
T KOG0444|consen 131 LNLSYNNIE-TIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQ 208 (1255)
T ss_pred EEcccCccc-cCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhccccc
Confidence 678899998 899998888999999999988877 455566677777777777776532
Q ss_pred -----CCCCccccCCcceEEeccccccCcCCCccchhhhccccCCCCcEEEeecccccccccccccccccccceEEeccc
Q 048125 61 -----KVPSLENLHKLQRVIISQNHLGNYGEKDNLEFVNSLVNASRLELLQISDNNFGGMLPEAVGNFSTRLGILSVAEN 135 (258)
Q Consensus 61 -----~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~l~~~ 135 (258)
.+..+..+.+|+.++++.|.+. .+++.+..+++|+.|++++|.++ .+....... ..+++|++++|
T Consensus 209 RTl~N~Ptsld~l~NL~dvDlS~N~Lp--------~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W-~~lEtLNlSrN 278 (1255)
T KOG0444|consen 209 RTLDNIPTSLDDLHNLRDVDLSENNLP--------IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEW-ENLETLNLSRN 278 (1255)
T ss_pred chhhcCCCchhhhhhhhhccccccCCC--------cchHHHhhhhhhheeccCcCcee-eeeccHHHH-hhhhhhccccc
Confidence 2233455666777777777665 56778889999999999999998 554444444 37999999999
Q ss_pred ccCCccCccCCCCCcccEEEeeCCccc-cccCCcccCccCCcEEEecCCccccccCCCCCCCCCcceEecccccccccCC
Q 048125 136 QLFGNIPSGLRNLVNLELLDLSGNQFT-SRIPGSIGDLQKLQMLGLNGNKFLGEIPSSIGNLTLLMTLNFAENMLEGSIP 214 (258)
Q Consensus 136 ~~~~~~~~~~~~~~~L~~L~l~~~~~~-~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~ 214 (258)
+.. .+|.++..+++|+.|...+|.+. .-+|..++.+.+|+.+...+|.+. ..|+.+..|.+|+.|.+..|++. .+|
T Consensus 279 QLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLP 355 (1255)
T KOG0444|consen 279 QLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLP 355 (1255)
T ss_pred hhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-ech
Confidence 987 78999999999999999999775 235778899999999999999887 89999999999999999999988 799
Q ss_pred cccccCcCCcEEeccCCc
Q 048125 215 SSLGKCQNLIVLDLYNNN 232 (258)
Q Consensus 215 ~~~~~~~~L~~L~l~~~~ 232 (258)
+.+.-++.|..|++..|.
T Consensus 356 eaIHlL~~l~vLDlreNp 373 (1255)
T KOG0444|consen 356 EAIHLLPDLKVLDLRENP 373 (1255)
T ss_pred hhhhhcCCcceeeccCCc
Confidence 999999999999999984
No 8
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.82 E-value=1.7e-23 Score=164.00 Aligned_cols=236 Identities=30% Similarity=0.426 Sum_probs=120.7
Q ss_pred CCCcCcccCCCCcchhccCCCCceEEecCCcccccccccccCCCCCcEEEeecccCCCCCCCccccCCcceEEecccccc
Q 048125 3 DFPFNQLQGSLPSDLGFTLPNLEGLNLAGNQFTGPIPVSISNASNLRELMIGKNGFSGKVPSLENLHKLQRVIISQNHLG 82 (258)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~L~~L~l~~~~~~ 82 (258)
.+.+|.++ .+..++- ++..+.++++.++... ..|.++.++..++.++.++|++...+.++..+..|++++.++|.+.
T Consensus 51 ils~N~l~-~l~~dl~-nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls~lp~~i~s~~~l~~l~~s~n~~~ 127 (565)
T KOG0472|consen 51 ILSHNDLE-VLREDLK-NLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLSELPEQIGSLISLVKLDCSSNELK 127 (565)
T ss_pred hhccCchh-hccHhhh-cccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHhhccHHHhhhhhhhhhhcccccee
Confidence 34455555 3344333 3555556666555554 3455555555555555655555555555555555555555555544
Q ss_pred CcCCCccchhhhccccCCCCcEEEeecccccccccccccccc----------------------cccceEEecccccCCc
Q 048125 83 NYGEKDNLEFVNSLVNASRLELLQISDNNFGGMLPEAVGNFS----------------------TRLGILSVAENQLFGN 140 (258)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~----------------------~~l~~L~l~~~~~~~~ 140 (258)
..++.+..+..++.++..+|++. .+|+.++... ..+++++...|... .
T Consensus 128 --------el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~m~~L~~ld~~~N~L~-t 197 (565)
T KOG0472|consen 128 --------ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIAMKRLKHLDCNSNLLE-T 197 (565)
T ss_pred --------ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHHHHHHHhcccchhhhh-c
Confidence 23334444444444444444444 3344333332 24444444444333 3
Q ss_pred cCccCCCCCcccEEEeeCCccccccCCcccCccCCcEEEecCCccccccC-CCCCCCCCcceEecccccccccCCccccc
Q 048125 141 IPSGLRNLVNLELLDLSGNQFTSRIPGSIGDLQKLQMLGLNGNKFLGEIP-SSIGNLTLLMTLNFAENMLEGSIPSSLGK 219 (258)
Q Consensus 141 ~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~-~~~~~~~~L~~L~l~~n~~~~~~~~~~~~ 219 (258)
+|..++.+.+|.-|++..|++. ..| .|.++..|+.+.++.|++. .+| +..+.++++..||+.+|.+. ..|..++-
T Consensus 198 lP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~cl 273 (565)
T KOG0472|consen 198 LPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICL 273 (565)
T ss_pred CChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHH
Confidence 4444444555555555555554 334 4455555555555555554 233 23345555666666666655 45555555
Q ss_pred CcCCcEEeccCCccccccccccccccCcceeEecCCCCC
Q 048125 220 CQNLIVLDLYNNNLSGTIPSEVIGLSSLSIYLDLSQNQL 258 (258)
Q Consensus 220 ~~~L~~L~l~~~~l~~~~~~~~~~~~~l~~~L~l~~n~~ 258 (258)
+.+|.+||+++|.|+ ..|..++.+ .+ +.|-+.|||+
T Consensus 274 LrsL~rLDlSNN~is-~Lp~sLgnl-hL-~~L~leGNPl 309 (565)
T KOG0472|consen 274 LRSLERLDLSNNDIS-SLPYSLGNL-HL-KFLALEGNPL 309 (565)
T ss_pred hhhhhhhcccCCccc-cCCcccccc-ee-eehhhcCCch
Confidence 566666666666666 455555555 55 5666666553
No 9
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.81 E-value=1.8e-22 Score=157.75 Aligned_cols=247 Identities=24% Similarity=0.254 Sum_probs=178.8
Q ss_pred CCCCcCcccCCCCcchhccCCCCceEEecCCcccccccccccCCCCCcEEEeec-ccCCCCCCC-ccccCCcceEEeccc
Q 048125 2 FDFPFNQLQGSLPSDLGFTLPNLEGLNLAGNQFTGPIPVSISNASNLRELMIGK-NGFSGKVPS-LENLHKLQRVIISQN 79 (258)
Q Consensus 2 l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~-~~~~~~~~~-~~~l~~L~~L~l~~~ 79 (258)
+.+..|.|+ .+|...|..+++||+|++++|.|+.+.|++|.+++.+..|.+.+ |++++.+.. |+++..|+.|.+.-|
T Consensus 72 irLdqN~I~-~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNan 150 (498)
T KOG4237|consen 72 IRLDQNQIS-SIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLNAN 150 (498)
T ss_pred EEeccCCcc-cCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcChh
Confidence 456678888 88888888888999999998888888888888888888877766 888877776 888888888888877
Q ss_pred cccCcCCCccchhhhccccCCCCcEEEeecccccccccccccccccccceEEecccccC------------CccCccCCC
Q 048125 80 HLGNYGEKDNLEFVNSLVNASRLELLQISDNNFGGMLPEAVGNFSTRLGILSVAENQLF------------GNIPSGLRN 147 (258)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~------------~~~~~~~~~ 147 (258)
++.. .....+..++++..|.+.+|.+. .++...+.....++.+.+..+... ...+..++.
T Consensus 151 ~i~C-------ir~~al~dL~~l~lLslyDn~~q-~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsg 222 (498)
T KOG4237|consen 151 HINC-------IRQDALRDLPSLSLLSLYDNKIQ-SICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSG 222 (498)
T ss_pred hhcc-------hhHHHHHHhhhcchhcccchhhh-hhccccccchhccchHhhhcCccccccccchhhhHHhhchhhccc
Confidence 7765 34457888899999999988775 444422222234555555444310 000111110
Q ss_pred CC----------------------cccEE---EeeCCccccccC-CcccCccCCcEEEecCCccccccCCCCCCCCCcce
Q 048125 148 LV----------------------NLELL---DLSGNQFTSRIP-GSIGDLQKLQMLGLNGNKFLGEIPSSIGNLTLLMT 201 (258)
Q Consensus 148 ~~----------------------~L~~L---~l~~~~~~~~~~-~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~ 201 (258)
.. .++.+ -.+.+......| ..|..+++|+.|++++|.++++.+.+|....+++.
T Consensus 223 arc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~e 302 (498)
T KOG4237|consen 223 ARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQE 302 (498)
T ss_pred ceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhh
Confidence 00 01111 111121222222 35788999999999999999888889999999999
Q ss_pred EecccccccccCCcccccCcCCcEEeccCCccccccccccccccCcceeEecCCCCC
Q 048125 202 LNFAENMLEGSIPSSLGKCQNLIVLDLYNNNLSGTIPSEVIGLSSLSIYLDLSQNQL 258 (258)
Q Consensus 202 L~l~~n~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~l~~~L~l~~n~~ 258 (258)
|.+.+|++...-..++.++..|+.|++.+|+|+..-|-.|....++ .+|+|-+||+
T Consensus 303 L~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l-~~l~l~~Np~ 358 (498)
T KOG4237|consen 303 LYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSL-STLNLLSNPF 358 (498)
T ss_pred hhcCcchHHHHHHHhhhccccceeeeecCCeeEEEeccccccccee-eeeehccCcc
Confidence 9999999986667788889999999999999997777888899999 9999998885
No 10
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.80 E-value=1.3e-18 Score=160.67 Aligned_cols=94 Identities=20% Similarity=0.264 Sum_probs=49.1
Q ss_pred cCcccCCCCcchhccCCCCceEEecCCcccccccccccCCCCCcEEEeecccCCCCCCCccccCCcceEEeccccccCcC
Q 048125 6 FNQLQGSLPSDLGFTLPNLEGLNLAGNQFTGPIPVSISNASNLRELMIGKNGFSGKVPSLENLHKLQRVIISQNHLGNYG 85 (258)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~ 85 (258)
++.++ .+|..+. +.+|++|++.++.+. .++..+..+++|+.|+++++......+.+..+++|+.|++.+|....
T Consensus 598 ~~~l~-~lP~~f~--~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~ls~l~~Le~L~L~~c~~L~-- 671 (1153)
T PLN03210 598 KYPLR-CMPSNFR--PENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPDLSMATNLETLKLSDCSSLV-- 671 (1153)
T ss_pred CCCCC-CCCCcCC--ccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCccccCCcccEEEecCCCCcc--
Confidence 33444 5555442 556666666666555 34445555666666666655433333345555666666666553221
Q ss_pred CCccchhhhccccCCCCcEEEeecc
Q 048125 86 EKDNLEFVNSLVNASRLELLQISDN 110 (258)
Q Consensus 86 ~~~~~~~~~~~~~~~~L~~L~l~~~ 110 (258)
.++..+..+++|+.|++++|
T Consensus 672 -----~lp~si~~L~~L~~L~L~~c 691 (1153)
T PLN03210 672 -----ELPSSIQYLNKLEDLDMSRC 691 (1153)
T ss_pred -----ccchhhhccCCCCEEeCCCC
Confidence 23334444555555555554
No 11
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.80 E-value=8.3e-22 Score=168.37 Aligned_cols=241 Identities=34% Similarity=0.431 Sum_probs=159.7
Q ss_pred CCCCcCcccCCCCcchhccCCCCceEEecCCcccccccccccCCCCCcEEEeecccCCCCCCCccccCCcceEEeccccc
Q 048125 2 FDFPFNQLQGSLPSDLGFTLPNLEGLNLAGNQFTGPIPVSISNASNLRELMIGKNGFSGKVPSLENLHKLQRVIISQNHL 81 (258)
Q Consensus 2 l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~L~~L~l~~~~~ 81 (258)
++++++.++ .+|.++. .|.+|+.+...++.+. ..|..+.....|+.|...+|.+...++...++..|++|++..|.+
T Consensus 246 ~dis~n~l~-~lp~wi~-~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~yip~~le~~~sL~tLdL~~N~L 322 (1081)
T KOG0618|consen 246 LDISHNNLS-NLPEWIG-ACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELEYIPPFLEGLKSLRTLDLQSNNL 322 (1081)
T ss_pred eecchhhhh-cchHHHH-hcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhhhCCCcccccceeeeeeehhccc
Confidence 445555555 5554444 3555555555555553 344444455555555555555555555555555666666666655
Q ss_pred cCcCCCccchhhhccccCC-CCcEEEeecccccccccccccccccccceEEecccccCCccCccCCCCCcccEEEeeCCc
Q 048125 82 GNYGEKDNLEFVNSLVNAS-RLELLQISDNNFGGMLPEAVGNFSTRLGILSVAENQLFGNIPSGLRNLVNLELLDLSGNQ 160 (258)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~-~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~ 160 (258)
....+. .+.... +++.+..+.+.+. ..|..=....+.|+.|++.+|..++..-..+-+.++|+.|++++|.
T Consensus 323 ~~lp~~-------~l~v~~~~l~~ln~s~n~l~-~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNr 394 (1081)
T KOG0618|consen 323 PSLPDN-------FLAVLNASLNTLNVSSNKLS-TLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNR 394 (1081)
T ss_pred cccchH-------HHhhhhHHHHHHhhhhcccc-ccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccc
Confidence 543221 111111 1333443444333 2221111122467888888888876655567788899999999999
Q ss_pred cccccCCcccCccCCcEEEecCCccccccCCCCCCCCCcceEecccccccccCCcccccCcCCcEEeccCCccccccccc
Q 048125 161 FTSRIPGSIGDLQKLQMLGLNGNKFLGEIPSSIGNLTLLMTLNFAENMLEGSIPSSLGKCQNLIVLDLYNNNLSGTIPSE 240 (258)
Q Consensus 161 ~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~ 240 (258)
+.......++.+..|+.|+++||.++ .+|+....++.|++|...+|.+. ..| .+.++++|+.+|++.|.++......
T Consensus 395 L~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~ 471 (1081)
T KOG0618|consen 395 LNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPE 471 (1081)
T ss_pred cccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhh
Confidence 98666667788999999999999998 78888999999999999999998 677 7789999999999999999443333
Q ss_pred cccccCcceeEecCCCC
Q 048125 241 VIGLSSLSIYLDLSQNQ 257 (258)
Q Consensus 241 ~~~~~~l~~~L~l~~n~ 257 (258)
....|.| +|||++||.
T Consensus 472 ~~p~p~L-kyLdlSGN~ 487 (1081)
T KOG0618|consen 472 ALPSPNL-KYLDLSGNT 487 (1081)
T ss_pred hCCCccc-ceeeccCCc
Confidence 3334889 999999985
No 12
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.78 E-value=6e-18 Score=156.41 Aligned_cols=237 Identities=24% Similarity=0.326 Sum_probs=126.2
Q ss_pred CCCCcCcccCCCCcchhccCCCCceEEecCCcccccccccccCCCCCcEEEeecccCCC-CCCCccccCCcceEEecccc
Q 048125 2 FDFPFNQLQGSLPSDLGFTLPNLEGLNLAGNQFTGPIPVSISNASNLRELMIGKNGFSG-KVPSLENLHKLQRVIISQNH 80 (258)
Q Consensus 2 l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~-~~~~~~~l~~L~~L~l~~~~ 80 (258)
|++.+|.+. .++..+. .+++|+.+++.++.....+| .+..+++|+.|++++|.... .+..+..+++|+.|++++|.
T Consensus 616 L~L~~s~l~-~L~~~~~-~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~ 692 (1153)
T PLN03210 616 LQMQGSKLE-KLWDGVH-SLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCE 692 (1153)
T ss_pred EECcCcccc-ccccccc-cCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCC
Confidence 456666666 5665554 46777777776654333344 35566667777776655432 22235566666666666643
Q ss_pred -ccCcCCCccchhhhccccCCCC---------------------cEEEeecccccccccccc------------------
Q 048125 81 -LGNYGEKDNLEFVNSLVNASRL---------------------ELLQISDNNFGGMLPEAV------------------ 120 (258)
Q Consensus 81 -~~~~~~~~~~~~~~~~~~~~~L---------------------~~L~l~~~~~~~~~~~~~------------------ 120 (258)
+... +..+ .+++| +.|+++++.+. .+|..+
T Consensus 693 ~L~~L--------p~~i-~l~sL~~L~Lsgc~~L~~~p~~~~nL~~L~L~~n~i~-~lP~~~~l~~L~~L~l~~~~~~~l 762 (1153)
T PLN03210 693 NLEIL--------PTGI-NLKSLYRLNLSGCSRLKSFPDISTNISWLDLDETAIE-EFPSNLRLENLDELILCEMKSEKL 762 (1153)
T ss_pred CcCcc--------CCcC-CCCCCCEEeCCCCCCccccccccCCcCeeecCCCccc-cccccccccccccccccccchhhc
Confidence 2211 1111 23334 44444444332 222111
Q ss_pred -----------cccccccceEEecccccCCccCccCCCCCcccEEEeeCCccccccCCcccCccCCcEEEecCCcccccc
Q 048125 121 -----------GNFSTRLGILSVAENQLFGNIPSGLRNLVNLELLDLSGNQFTSRIPGSIGDLQKLQMLGLNGNKFLGEI 189 (258)
Q Consensus 121 -----------~~~~~~l~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~ 189 (258)
...+++|+.|++++|.....+|..++.+++|++|++++|......|... .+++|++|++++|.....+
T Consensus 763 ~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~ 841 (1153)
T PLN03210 763 WERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTF 841 (1153)
T ss_pred cccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCccccc
Confidence 0011245555555554433455555555666666666553222334332 4555666666655433233
Q ss_pred CCCCCCCCCcceEecccccccccCCcccccCcCCcEEeccCCccccccccccccccCcceeEecCCCC
Q 048125 190 PSSIGNLTLLMTLNFAENMLEGSIPSSLGKCQNLIVLDLYNNNLSGTIPSEVIGLSSLSIYLDLSQNQ 257 (258)
Q Consensus 190 ~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~l~~~L~l~~n~ 257 (258)
|.. .++|+.|++++|.+. .+|..+..+++|+.|++++|+-...++..+..++.+ +++++++|.
T Consensus 842 p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L-~~L~l~~C~ 904 (1153)
T PLN03210 842 PDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHL-ETVDFSDCG 904 (1153)
T ss_pred ccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCC-CeeecCCCc
Confidence 322 245667777777776 567777777888888888763333566667777777 777777763
No 13
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.77 E-value=6.9e-19 Score=153.80 Aligned_cols=227 Identities=22% Similarity=0.368 Sum_probs=116.7
Q ss_pred CCCcCcccCCCCcchhccCCCCceEEecCCcccccccccccCCCCCcEEEeecccCCCCCCCccccCCcceEEecccccc
Q 048125 3 DFPFNQLQGSLPSDLGFTLPNLEGLNLAGNQFTGPIPVSISNASNLRELMIGKNGFSGKVPSLENLHKLQRVIISQNHLG 82 (258)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~L~~L~l~~~~~~ 82 (258)
++.++.++ .+|..+. ++|+.|++.+|.++. +|..+. .+|+.|++++|.+...+..+ ..+|+.|++++|.+.
T Consensus 184 ~L~~~~Lt-sLP~~Ip---~~L~~L~Ls~N~Lts-LP~~l~--~nL~~L~Ls~N~LtsLP~~l--~~~L~~L~Ls~N~L~ 254 (754)
T PRK15370 184 RLKILGLT-TIPACIP---EQITTLILDNNELKS-LPENLQ--GNIKTLYANSNQLTSIPATL--PDTIQEMELSINRIT 254 (754)
T ss_pred EeCCCCcC-cCCcccc---cCCcEEEecCCCCCc-CChhhc--cCCCEEECCCCccccCChhh--hccccEEECcCCccC
Confidence 44455555 5555432 345566666555552 333322 35555555555554333222 124555555555444
Q ss_pred CcCCCcc-------------chhhhccccCCCCcEEEeecccccccccccccccccccceEEecccccCCccCccCCCCC
Q 048125 83 NYGEKDN-------------LEFVNSLVNASRLELLQISDNNFGGMLPEAVGNFSTRLGILSVAENQLFGNIPSGLRNLV 149 (258)
Q Consensus 83 ~~~~~~~-------------~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~~~~~~~~~~~ 149 (258)
.++.... ..++..+ .++|+.|++++|.+. .+|..+. .+++.|++++|.+. .+|..+ .+
T Consensus 255 ~LP~~l~s~L~~L~Ls~N~L~~LP~~l--~~sL~~L~Ls~N~Lt-~LP~~lp---~sL~~L~Ls~N~Lt-~LP~~l--~~ 325 (754)
T PRK15370 255 ELPERLPSALQSLDLFHNKISCLPENL--PEELRYLSVYDNSIR-TLPAHLP---SGITHLNVQSNSLT-ALPETL--PP 325 (754)
T ss_pred cCChhHhCCCCEEECcCCccCcccccc--CCCCcEEECCCCccc-cCcccch---hhHHHHHhcCCccc-cCCccc--cc
Confidence 2211000 0011111 124555555555444 2332221 24555555555444 233222 24
Q ss_pred cccEEEeeCCccccccCCcccCccCCcEEEecCCccccccCCCCCCCCCcceEecccccccccCCcccccCcCCcEEecc
Q 048125 150 NLELLDLSGNQFTSRIPGSIGDLQKLQMLGLNGNKFLGEIPSSIGNLTLLMTLNFAENMLEGSIPSSLGKCQNLIVLDLY 229 (258)
Q Consensus 150 ~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~ 229 (258)
+|++|++++|.+.. .|..+. ++|+.|++++|.+. .+|..+. ++|+.|++++|.+. .+|..+. ..|+.|+++
T Consensus 326 sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt-~LP~~l~--~sL~~LdLs 396 (754)
T PRK15370 326 GLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALT-NLPENLP--AALQIMQAS 396 (754)
T ss_pred cceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCC-CCCHhHH--HHHHHHhhc
Confidence 67777777776663 444332 57777777777776 4555442 57777888877776 4454443 357777888
Q ss_pred CCccccccccccc----cccCcceeEecCCCCC
Q 048125 230 NNNLSGTIPSEVI----GLSSLSIYLDLSQNQL 258 (258)
Q Consensus 230 ~~~l~~~~~~~~~----~~~~l~~~L~l~~n~~ 258 (258)
+|++. .+|..+. ..+.+ .+|+|.+|++
T Consensus 397 ~N~L~-~LP~sl~~~~~~~~~l-~~L~L~~Npl 427 (754)
T PRK15370 397 RNNLV-RLPESLPHFRGEGPQP-TRIIVEYNPF 427 (754)
T ss_pred cCCcc-cCchhHHHHhhcCCCc-cEEEeeCCCc
Confidence 88777 4554333 34666 7888888875
No 14
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.77 E-value=4.6e-20 Score=148.96 Aligned_cols=252 Identities=24% Similarity=0.325 Sum_probs=128.2
Q ss_pred CCCCcCcccCCCCcchhccCCCCceEEecCCccccc----ccccccCCCCCcEEEeecccCCCCC-------CCccccCC
Q 048125 2 FDFPFNQLQGSLPSDLGFTLPNLEGLNLAGNQFTGP----IPVSISNASNLRELMIGKNGFSGKV-------PSLENLHK 70 (258)
Q Consensus 2 l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~----~~~~~~~~~~L~~L~l~~~~~~~~~-------~~~~~l~~ 70 (258)
|++..+.+++.--..++..+.+|+++++.++.++.. ++..+...+.+++++++++.+.... ..+..+++
T Consensus 3 l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~ 82 (319)
T cd00116 3 LSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCG 82 (319)
T ss_pred cccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCc
Confidence 455666665332223333466677777777766432 3333445566777777666554201 11344567
Q ss_pred cceEEeccccccCcCCCccchhhhccccCCCCcEEEeeccccccc----ccccccccccccceEEecccccCCc----cC
Q 048125 71 LQRVIISQNHLGNYGEKDNLEFVNSLVNASRLELLQISDNNFGGM----LPEAVGNFSTRLGILSVAENQLFGN----IP 142 (258)
Q Consensus 71 L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~----~~~~~~~~~~~l~~L~l~~~~~~~~----~~ 142 (258)
|++|++++|.+...... .+...... ++|++|++++|.+.+. +...+....++++.+++++|.+... ++
T Consensus 83 L~~L~l~~~~~~~~~~~---~~~~l~~~-~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~ 158 (319)
T cd00116 83 LQELDLSDNALGPDGCG---VLESLLRS-SSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALA 158 (319)
T ss_pred eeEEEccCCCCChhHHH---HHHHHhcc-CcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHH
Confidence 77777776666531111 11111111 4477777776665421 1112222223567777776665421 22
Q ss_pred ccCCCCCcccEEEeeCCccccc----cCCcccCccCCcEEEecCCcccc----ccCCCCCCCCCcceEecccccccccCC
Q 048125 143 SGLRNLVNLELLDLSGNQFTSR----IPGSIGDLQKLQMLGLNGNKFLG----EIPSSIGNLTLLMTLNFAENMLEGSIP 214 (258)
Q Consensus 143 ~~~~~~~~L~~L~l~~~~~~~~----~~~~~~~~~~L~~L~l~~~~~~~----~~~~~~~~~~~L~~L~l~~n~~~~~~~ 214 (258)
..+..+++|++|++++|.+.+. .+..+...++|++|++++|.+.+ .+...+..+++|++|++++|.+.+...
T Consensus 159 ~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~ 238 (319)
T cd00116 159 KALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGA 238 (319)
T ss_pred HHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHH
Confidence 3344455667777776666521 12223344567777776666542 223344556667777777766653222
Q ss_pred ccccc-----CcCCcEEeccCCcccc----ccccccccccCcceeEecCCCCC
Q 048125 215 SSLGK-----CQNLIVLDLYNNNLSG----TIPSEVIGLSSLSIYLDLSQNQL 258 (258)
Q Consensus 215 ~~~~~-----~~~L~~L~l~~~~l~~----~~~~~~~~~~~l~~~L~l~~n~~ 258 (258)
..+.. .++|+.|++++|++++ .+...+..++.+ +++++++|.+
T Consensus 239 ~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L-~~l~l~~N~l 290 (319)
T cd00116 239 AALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESL-LELDLRGNKF 290 (319)
T ss_pred HHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCc-cEEECCCCCC
Confidence 22211 2566777777776651 222334444566 6667666653
No 15
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.76 E-value=7.5e-18 Score=146.84 Aligned_cols=224 Identities=27% Similarity=0.352 Sum_probs=131.7
Q ss_pred CCCCcCcccCCCCcchhccCCCCceEEecCCcccccccccccCCCCCcEEEeecccCCCCCCCccccCCcceEEeccccc
Q 048125 2 FDFPFNQLQGSLPSDLGFTLPNLEGLNLAGNQFTGPIPVSISNASNLRELMIGKNGFSGKVPSLENLHKLQRVIISQNHL 81 (258)
Q Consensus 2 l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~L~~L~l~~~~~ 81 (258)
|+++++.++ ++|..+. ++|+.|.+.+|.++. +|. ..++|+.|++++|.+...+.. .++|+.|++.+|.+
T Consensus 206 LdLs~~~Lt-sLP~~l~---~~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~LtsLP~l---p~sL~~L~Ls~N~L 274 (788)
T PRK15387 206 LNVGESGLT-TLPDCLP---AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTSLPVL---PPGLLELSIFSNPL 274 (788)
T ss_pred EEcCCCCCC-cCCcchh---cCCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccCcccCc---ccccceeeccCCch
Confidence 678888888 8888765 378888888888874 443 257888888888888765432 24666666666655
Q ss_pred cCcCCCc---------cchhhhccccCCCCcEEEeecccccccccccccccccccceEEecccccCCccCccCCCCCccc
Q 048125 82 GNYGEKD---------NLEFVNSLVNASRLELLQISDNNFGGMLPEAVGNFSTRLGILSVAENQLFGNIPSGLRNLVNLE 152 (258)
Q Consensus 82 ~~~~~~~---------~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~~~~~~~~~~~~L~ 152 (258)
..++..- ...+.......++|+.|++++|.+. .+|.. +..++.|++.+|.+. .+|. ...+|+
T Consensus 275 ~~Lp~lp~~L~~L~Ls~N~Lt~LP~~p~~L~~LdLS~N~L~-~Lp~l----p~~L~~L~Ls~N~L~-~LP~---lp~~Lq 345 (788)
T PRK15387 275 THLPALPSGLCKLWIFGNQLTSLPVLPPGLQELSVSDNQLA-SLPAL----PSELCKLWAYNNQLT-SLPT---LPSGLQ 345 (788)
T ss_pred hhhhhchhhcCEEECcCCccccccccccccceeECCCCccc-cCCCC----cccccccccccCccc-cccc---cccccc
Confidence 5332100 0000000001245677777776665 23321 112333333333332 1221 012444
Q ss_pred EEEeeCCcccc-------------------ccCCcccCccCCcEEEecCCccccccCCCCCCCCCcceEecccccccccC
Q 048125 153 LLDLSGNQFTS-------------------RIPGSIGDLQKLQMLGLNGNKFLGEIPSSIGNLTLLMTLNFAENMLEGSI 213 (258)
Q Consensus 153 ~L~l~~~~~~~-------------------~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~ 213 (258)
+|++++|.+.. ..|.. ..+|+.|++++|.+. .+|.. .++|+.|++++|.+. .+
T Consensus 346 ~LdLS~N~Ls~LP~lp~~L~~L~Ls~N~L~~LP~l---~~~L~~LdLs~N~Lt-~LP~l---~s~L~~LdLS~N~Ls-sI 417 (788)
T PRK15387 346 ELSVSDNQLASLPTLPSELYKLWAYNNRLTSLPAL---PSGLKELIVSGNRLT-SLPVL---PSELKELMVSGNRLT-SL 417 (788)
T ss_pred eEecCCCccCCCCCCCcccceehhhccccccCccc---ccccceEEecCCccc-CCCCc---ccCCCEEEccCCcCC-CC
Confidence 55555544442 12221 235677777777766 34432 256777888888876 45
Q ss_pred CcccccCcCCcEEeccCCccccccccccccccCcceeEecCCCCC
Q 048125 214 PSSLGKCQNLIVLDLYNNNLSGTIPSEVIGLSSLSIYLDLSQNQL 258 (258)
Q Consensus 214 ~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~l~~~L~l~~n~~ 258 (258)
|.. ..+|+.|++++|.|+ .+|..+..++.+ .+|+|++|+|
T Consensus 418 P~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L-~~LdLs~N~L 457 (788)
T PRK15387 418 PML---PSGLLSLSVYRNQLT-RLPESLIHLSSE-TTVNLEGNPL 457 (788)
T ss_pred Ccc---hhhhhhhhhccCccc-ccChHHhhccCC-CeEECCCCCC
Confidence 543 246778888888888 788888889999 9999999986
No 16
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.75 E-value=5.1e-18 Score=148.40 Aligned_cols=203 Identities=22% Similarity=0.369 Sum_probs=117.8
Q ss_pred CCCceEEecCCcccccccccccCCCCCcEEEeecccCCCCCCCccccCCcceEEeccccccCcCCCccchhhhccccCCC
Q 048125 22 PNLEGLNLAGNQFTGPIPVSISNASNLRELMIGKNGFSGKVPSLENLHKLQRVIISQNHLGNYGEKDNLEFVNSLVNASR 101 (258)
Q Consensus 22 ~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (258)
.+...|++.+.+++. +|..+. +.++.|++++|.+...+..+. .+|+.|++++|.++.++. .+ .+.
T Consensus 178 ~~~~~L~L~~~~Lts-LP~~Ip--~~L~~L~Ls~N~LtsLP~~l~--~nL~~L~Ls~N~LtsLP~--------~l--~~~ 242 (754)
T PRK15370 178 NNKTELRLKILGLTT-IPACIP--EQITTLILDNNELKSLPENLQ--GNIKTLYANSNQLTSIPA--------TL--PDT 242 (754)
T ss_pred cCceEEEeCCCCcCc-CCcccc--cCCcEEEecCCCCCcCChhhc--cCCCEEECCCCccccCCh--------hh--hcc
Confidence 357789999888874 565443 579999999999987665443 589999999999875432 11 235
Q ss_pred CcEEEeecccccccccccccccccccceEEecccccCCccCccCCCCCcccEEEeeCCccccccCCccc-----------
Q 048125 102 LELLQISDNNFGGMLPEAVGNFSTRLGILSVAENQLFGNIPSGLRNLVNLELLDLSGNQFTSRIPGSIG----------- 170 (258)
Q Consensus 102 L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~----------- 170 (258)
|+.|++++|.+. .+|..+. .+|+.|+++.|.+. .+|..+. ++|++|++++|.+.. .|..+.
T Consensus 243 L~~L~Ls~N~L~-~LP~~l~---s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp~sL~~L~Ls~N 314 (754)
T PRK15370 243 IQEMELSINRIT-ELPERLP---SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLPSGITHLNVQSN 314 (754)
T ss_pred ccEEECcCCccC-cCChhHh---CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-CcccchhhHHHHHhcCC
Confidence 777777777766 5554432 35677777766665 3444332 366777777666653 232221
Q ss_pred --------CccCCcEEEecCCccccccCCCCCCCCCcceEecccccccccCCcccccCcCCcEEeccCCccccccccccc
Q 048125 171 --------DLQKLQMLGLNGNKFLGEIPSSIGNLTLLMTLNFAENMLEGSIPSSLGKCQNLIVLDLYNNNLSGTIPSEVI 242 (258)
Q Consensus 171 --------~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~ 242 (258)
..++|+.|++++|.++ .+|..+. ++|+.|++++|.+. .+|..+. ++|+.|++++|+++ .+|..+.
T Consensus 315 ~Lt~LP~~l~~sL~~L~Ls~N~Lt-~LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt-~LP~~l~ 387 (754)
T PRK15370 315 SLTALPETLPPGLKTLEAGENALT-SLPASLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALT-NLPENLP 387 (754)
T ss_pred ccccCCccccccceeccccCCccc-cCChhhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCC-CCCHhHH
Confidence 1134455555555444 2333222 45555555555554 3333321 45555555555555 3443332
Q ss_pred cccCcceeEecCCCC
Q 048125 243 GLSSLSIYLDLSQNQ 257 (258)
Q Consensus 243 ~~~~l~~~L~l~~n~ 257 (258)
..+ ++|++++|.
T Consensus 388 --~sL-~~LdLs~N~ 399 (754)
T PRK15370 388 --AAL-QIMQASRNN 399 (754)
T ss_pred --HHH-HHHhhccCC
Confidence 134 555555554
No 17
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.74 E-value=6.6e-20 Score=148.03 Aligned_cols=251 Identities=24% Similarity=0.353 Sum_probs=175.1
Q ss_pred CCCCcCcccCC----CCcchhccCCCCceEEecCCcccc------cccccccCCCCCcEEEeecccCCCCCCC-cccc--
Q 048125 2 FDFPFNQLQGS----LPSDLGFTLPNLEGLNLAGNQFTG------PIPVSISNASNLRELMIGKNGFSGKVPS-LENL-- 68 (258)
Q Consensus 2 l~~~~~~~~~~----~~~~~~~~~~~L~~L~l~~~~~~~------~~~~~~~~~~~L~~L~l~~~~~~~~~~~-~~~l-- 68 (258)
|++.++.+++. ++..+. ..++++++++.++.+.+ ..+..+..+++|+.|++++|.+...... +..+
T Consensus 28 l~l~~~~l~~~~~~~i~~~l~-~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~ 106 (319)
T cd00116 28 LRLEGNTLGEEAAKALASALR-PQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLR 106 (319)
T ss_pred EeecCCCCcHHHHHHHHHHHh-hCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhc
Confidence 56677777532 333333 57889999999887662 2344567789999999999998743332 4334
Q ss_pred -CCcceEEeccccccCcCCCccchhhhccccC-CCCcEEEeecccccccc----cccccccccccceEEecccccCCc--
Q 048125 69 -HKLQRVIISQNHLGNYGEKDNLEFVNSLVNA-SRLELLQISDNNFGGML----PEAVGNFSTRLGILSVAENQLFGN-- 140 (258)
Q Consensus 69 -~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~-~~L~~L~l~~~~~~~~~----~~~~~~~~~~l~~L~l~~~~~~~~-- 140 (258)
++|++|++++|+++..+.. .+...+..+ ++|+.|++++|.+.+.. ...+... ..+++|++++|.+...
T Consensus 107 ~~~L~~L~ls~~~~~~~~~~---~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~-~~L~~L~l~~n~l~~~~~ 182 (319)
T cd00116 107 SSSLQELKLNNNGLGDRGLR---LLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRAN-RDLKELNLANNGIGDAGI 182 (319)
T ss_pred cCcccEEEeeCCccchHHHH---HHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhC-CCcCEEECcCCCCchHHH
Confidence 4499999999988742211 334456667 89999999999887332 2222222 4799999999987632
Q ss_pred --cCccCCCCCcccEEEeeCCccccc----cCCcccCccCCcEEEecCCccccccCCCC-----CCCCCcceEecccccc
Q 048125 141 --IPSGLRNLVNLELLDLSGNQFTSR----IPGSIGDLQKLQMLGLNGNKFLGEIPSSI-----GNLTLLMTLNFAENML 209 (258)
Q Consensus 141 --~~~~~~~~~~L~~L~l~~~~~~~~----~~~~~~~~~~L~~L~l~~~~~~~~~~~~~-----~~~~~L~~L~l~~n~~ 209 (258)
++..+...++|++|++++|.+.+. ....+..+++|++|++++|.+.+.....+ ...+.|++|++++|.+
T Consensus 183 ~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i 262 (319)
T cd00116 183 RALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDI 262 (319)
T ss_pred HHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCC
Confidence 233345567999999999988632 23455678899999999998875222111 1347999999999998
Q ss_pred cc----cCCcccccCcCCcEEeccCCccccc----cccccccc-cCcceeEecCCCCC
Q 048125 210 EG----SIPSSLGKCQNLIVLDLYNNNLSGT----IPSEVIGL-SSLSIYLDLSQNQL 258 (258)
Q Consensus 210 ~~----~~~~~~~~~~~L~~L~l~~~~l~~~----~~~~~~~~-~~l~~~L~l~~n~~ 258 (258)
++ .+...+..+++|+++++++|++++. ....+... +.+ ++++|.+|++
T Consensus 263 ~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 319 (319)
T cd00116 263 TDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNEL-ESLWVKDDSF 319 (319)
T ss_pred CcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCch-hhcccCCCCC
Confidence 62 2334455678999999999999854 34445555 567 9999999986
No 18
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.71 E-value=1.1e-19 Score=155.58 Aligned_cols=240 Identities=25% Similarity=0.266 Sum_probs=180.1
Q ss_pred CCCCcCcccCCCCcchhccCCCCceEEecCCcccccccccccCCCCCcEEEeecccCCCCCCCccccCCcceEEeccccc
Q 048125 2 FDFPFNQLQGSLPSDLGFTLPNLEGLNLAGNQFTGPIPVSISNASNLRELMIGKNGFSGKVPSLENLHKLQRVIISQNHL 81 (258)
Q Consensus 2 l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~L~~L~l~~~~~ 81 (258)
|+.++|.++...+. + --.+|++++++++.++ .+|..+..+.+|+.++..+|.+...+.++....+|+.|...+|.+
T Consensus 224 L~a~~n~l~~~~~~--p-~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~~lp~ri~~~~~L~~l~~~~nel 299 (1081)
T KOG0618|consen 224 LYADHNPLTTLDVH--P-VPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLVALPLRISRITSLVSLSAAYNEL 299 (1081)
T ss_pred eeeccCcceeeccc--c-ccccceeeecchhhhh-cchHHHHhcccceEecccchhHHhhHHHHhhhhhHHHHHhhhhhh
Confidence 34555655522221 1 1456777777777777 355777778888888888887766666677777788887777777
Q ss_pred cCcCCCccchhhhccccCCCCcEEEeeccccccccccccccccc-ccceEEecccccCCccCccCCCCCcccEEEeeCCc
Q 048125 82 GNYGEKDNLEFVNSLVNASRLELLQISDNNFGGMLPEAVGNFST-RLGILSVAENQLFGNIPSGLRNLVNLELLDLSGNQ 160 (258)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~-~l~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~ 160 (258)
.. +++....+..|++|++..|.+. .+|+.+..... .++.++.+.+++.....-.-...+.|+.|.+.+|.
T Consensus 300 ~y--------ip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~ 370 (1081)
T KOG0618|consen 300 EY--------IPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNH 370 (1081)
T ss_pred hh--------CCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCc
Confidence 63 3344556778999999999887 66665444332 36777777776652221122346789999999999
Q ss_pred cccccCCcccCccCCcEEEecCCccccccCCCCCCCCCcceEecccccccccCCcccccCcCCcEEeccCCccccccccc
Q 048125 161 FTSRIPGSIGDLQKLQMLGLNGNKFLGEIPSSIGNLTLLMTLNFAENMLEGSIPSSLGKCQNLIVLDLYNNNLSGTIPSE 240 (258)
Q Consensus 161 ~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~ 240 (258)
+++..-..+...++|+.|++++|++.......+.+++.|+.|+++||.++ .+|..+..+..|++|...+|.|. ..| .
T Consensus 371 Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e 447 (1081)
T KOG0618|consen 371 LTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-E 447 (1081)
T ss_pred ccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-h
Confidence 98766667888999999999999988443446789999999999999998 78899999999999999999999 778 8
Q ss_pred cccccCcceeEecCCCCC
Q 048125 241 VIGLSSLSIYLDLSQNQL 258 (258)
Q Consensus 241 ~~~~~~l~~~L~l~~n~~ 258 (258)
+..++.| +.+|||.|++
T Consensus 448 ~~~l~qL-~~lDlS~N~L 464 (1081)
T KOG0618|consen 448 LAQLPQL-KVLDLSCNNL 464 (1081)
T ss_pred hhhcCcc-eEEecccchh
Confidence 8999999 9999999874
No 19
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.70 E-value=1.6e-19 Score=126.45 Aligned_cols=161 Identities=30% Similarity=0.541 Sum_probs=101.6
Q ss_pred ccCCCCCcEEEeecccCCCCCCCccccCCcceEEeccccccCcCCCccchhhhccccCCCCcEEEeeccccccccccccc
Q 048125 42 ISNASNLRELMIGKNGFSGKVPSLENLHKLQRVIISQNHLGNYGEKDNLEFVNSLVNASRLELLQISDNNFGGMLPEAVG 121 (258)
Q Consensus 42 ~~~~~~L~~L~l~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~ 121 (258)
+..+.+++.|.+++|++..+++.+..+.+|+.|++++|+++ ..+..++.+++|+.|++.-|.+. ..|..++
T Consensus 29 Lf~~s~ITrLtLSHNKl~~vppnia~l~nlevln~~nnqie--------~lp~~issl~klr~lnvgmnrl~-~lprgfg 99 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLTVVPPNIAELKNLEVLNLSNNQIE--------ELPTSISSLPKLRILNVGMNRLN-ILPRGFG 99 (264)
T ss_pred ccchhhhhhhhcccCceeecCCcHHHhhhhhhhhcccchhh--------hcChhhhhchhhhheecchhhhh-cCccccC
Confidence 44566777777777777777777777777777777777776 45566777777777777766665 6666666
Q ss_pred ccccccceEEecccccCC-ccCccCCCCCcccEEEeeCCccccccCCcccCccCCcEEEecCCccccccCCCCCCCCCcc
Q 048125 122 NFSTRLGILSVAENQLFG-NIPSGLRNLVNLELLDLSGNQFTSRIPGSIGDLQKLQMLGLNGNKFLGEIPSSIGNLTLLM 200 (258)
Q Consensus 122 ~~~~~l~~L~l~~~~~~~-~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~ 200 (258)
.++ .++.|++.+|...+ .+|..|..++.|+.|+++.|++. ..|..++.+++|+.|.+.+|.+. .+|..++.+..|+
T Consensus 100 s~p-~levldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lr 176 (264)
T KOG0617|consen 100 SFP-ALEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLR 176 (264)
T ss_pred CCc-hhhhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHH
Confidence 663 66667666665543 24555555556666666666555 55555556666666666665555 4555555555555
Q ss_pred eEecccccccccCCc
Q 048125 201 TLNFAENMLEGSIPS 215 (258)
Q Consensus 201 ~L~l~~n~~~~~~~~ 215 (258)
.|.+.+|+++ .+|.
T Consensus 177 elhiqgnrl~-vlpp 190 (264)
T KOG0617|consen 177 ELHIQGNRLT-VLPP 190 (264)
T ss_pred HHhcccceee-ecCh
Confidence 6666666555 3443
No 20
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.66 E-value=1.2e-18 Score=122.15 Aligned_cols=165 Identities=31% Similarity=0.522 Sum_probs=145.5
Q ss_pred ccccCCcceEEeccccccCcCCCccchhhhccccCCCCcEEEeecccccccccccccccccccceEEecccccCCccCcc
Q 048125 65 LENLHKLQRVIISQNHLGNYGEKDNLEFVNSLVNASRLELLQISDNNFGGMLPEAVGNFSTRLGILSVAENQLFGNIPSG 144 (258)
Q Consensus 65 ~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~~~~~~ 144 (258)
+..+.++..|.+++|+++ .+++.+..+.+|+.|++++|.+. .+|..+..+ ++++.|++.-|+.. ..|..
T Consensus 29 Lf~~s~ITrLtLSHNKl~--------~vppnia~l~nlevln~~nnqie-~lp~~issl-~klr~lnvgmnrl~-~lprg 97 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT--------VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSL-PKLRILNVGMNRLN-ILPRG 97 (264)
T ss_pred ccchhhhhhhhcccCcee--------ecCCcHHHhhhhhhhhcccchhh-hcChhhhhc-hhhhheecchhhhh-cCccc
Confidence 345567888999999998 55667888999999999999998 888888877 48999999988876 78999
Q ss_pred CCCCCcccEEEeeCCccc-cccCCcccCccCCcEEEecCCccccccCCCCCCCCCcceEecccccccccCCcccccCcCC
Q 048125 145 LRNLVNLELLDLSGNQFT-SRIPGSIGDLQKLQMLGLNGNKFLGEIPSSIGNLTLLMTLNFAENMLEGSIPSSLGKCQNL 223 (258)
Q Consensus 145 ~~~~~~L~~L~l~~~~~~-~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L 223 (258)
|+.++.|+.||+.+|++. ...|+.|-.++.|+.|.+++|.+. .+|...+++.+|+.|.+.+|.+. .+|..++.+..|
T Consensus 98 fgs~p~levldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~l 175 (264)
T KOG0617|consen 98 FGSFPALEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRL 175 (264)
T ss_pred cCCCchhhhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHH
Confidence 999999999999999886 367888889999999999999988 88999999999999999999988 799999999999
Q ss_pred cEEeccCCcccccccccccc
Q 048125 224 IVLDLYNNNLSGTIPSEVIG 243 (258)
Q Consensus 224 ~~L~l~~~~l~~~~~~~~~~ 243 (258)
++|.++||+++ .+|..+..
T Consensus 176 relhiqgnrl~-vlppel~~ 194 (264)
T KOG0617|consen 176 RELHIQGNRLT-VLPPELAN 194 (264)
T ss_pred HHHhcccceee-ecChhhhh
Confidence 99999999999 77765543
No 21
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.66 E-value=1.1e-18 Score=136.79 Aligned_cols=241 Identities=23% Similarity=0.290 Sum_probs=174.1
Q ss_pred CCcCcccCCCCcchhccCCCCceEEecCCcccccccccccCCCCCcEEEeecccCCCCCCC-ccccCCcceEEecc-ccc
Q 048125 4 FPFNQLQGSLPSDLGFTLPNLEGLNLAGNQFTGPIPVSISNASNLRELMIGKNGFSGKVPS-LENLHKLQRVIISQ-NHL 81 (258)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~-~~~l~~L~~L~l~~-~~~ 81 (258)
....+++ ++|+.+. +....+.+..|.|+.+.+.+|..+++|++|++++|.+....+. |.++..|.+|.+.+ |++
T Consensus 53 Cr~~GL~-eVP~~LP---~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI 128 (498)
T KOG4237|consen 53 CRGKGLT-EVPANLP---PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKI 128 (498)
T ss_pred ccCCCcc-cCcccCC---CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCch
Confidence 3445666 7887764 3567889999999988888999999999999999999877776 88999988887776 888
Q ss_pred cCcCCCccchhhhccccCCCCcEEEeecccccccccccccccccccceEEecccccCCccCc-cCCCCCcccEEEeeCCc
Q 048125 82 GNYGEKDNLEFVNSLVNASRLELLQISDNNFGGMLPEAVGNFSTRLGILSVAENQLFGNIPS-GLRNLVNLELLDLSGNQ 160 (258)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~~~~~-~~~~~~~L~~L~l~~~~ 160 (258)
++... ..|..+..++-|.+..|++.-.....+..+ +++..|.+.+|.+. .+++ .|..+..++++++..|+
T Consensus 129 ~~l~k-------~~F~gL~slqrLllNan~i~Cir~~al~dL-~~l~lLslyDn~~q-~i~~~tf~~l~~i~tlhlA~np 199 (498)
T KOG4237|consen 129 TDLPK-------GAFGGLSSLQRLLLNANHINCIRQDALRDL-PSLSLLSLYDNKIQ-SICKGTFQGLAAIKTLHLAQNP 199 (498)
T ss_pred hhhhh-------hHhhhHHHHHHHhcChhhhcchhHHHHHHh-hhcchhcccchhhh-hhccccccchhccchHhhhcCc
Confidence 76432 357778888888888888763333334444 57888888888776 3444 67788888999888887
Q ss_pred ccc------------ccCCcccCccC----------------------CcEE--Ee-cCCccccccC-CCCCCCCCcceE
Q 048125 161 FTS------------RIPGSIGDLQK----------------------LQML--GL-NGNKFLGEIP-SSIGNLTLLMTL 202 (258)
Q Consensus 161 ~~~------------~~~~~~~~~~~----------------------L~~L--~l-~~~~~~~~~~-~~~~~~~~L~~L 202 (258)
... ..+..++.+.. ++.+ .+ +.+......| ..|+.+++|+++
T Consensus 200 ~icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~l 279 (498)
T KOG4237|consen 200 FICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKL 279 (498)
T ss_pred cccccccchhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEe
Confidence 321 11111111110 1111 01 1111111222 347889999999
Q ss_pred ecccccccccCCcccccCcCCcEEeccCCccccccccccccccCcceeEecCCCCC
Q 048125 203 NFAENMLEGSIPSSLGKCQNLIVLDLYNNNLSGTIPSEVIGLSSLSIYLDLSQNQL 258 (258)
Q Consensus 203 ~l~~n~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~l~~~L~l~~n~~ 258 (258)
++++|.+++.-+.+|.+..++++|++..|+|...-...|..+..| +.|+|++|.|
T Consensus 280 nlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L-~tL~L~~N~i 334 (498)
T KOG4237|consen 280 NLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGL-KTLSLYDNQI 334 (498)
T ss_pred ccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccc-eeeeecCCee
Confidence 999999999999999999999999999999995555678888899 9999999975
No 22
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.65 E-value=9.1e-16 Score=133.99 Aligned_cols=210 Identities=31% Similarity=0.375 Sum_probs=140.6
Q ss_pred CCCCcCcccCCCCcchhccCCCCceEEecCCcccccccccccCCCCCcEE--------------------EeecccCCCC
Q 048125 2 FDFPFNQLQGSLPSDLGFTLPNLEGLNLAGNQFTGPIPVSISNASNLREL--------------------MIGKNGFSGK 61 (258)
Q Consensus 2 l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L--------------------~l~~~~~~~~ 61 (258)
|++.+|+++ .+|. ..++|++|++.+|.++. +|.. .++|+.| ++++|.+...
T Consensus 227 L~L~~N~Lt-~LP~----lp~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~Ls~N~L~~Lp~lp~~L~~L~Ls~N~Lt~L 297 (788)
T PRK15387 227 LVIPDNNLT-SLPA----LPPELRTLEVSGNQLTS-LPVL---PPGLLELSIFSNPLTHLPALPSGLCKLWIFGNQLTSL 297 (788)
T ss_pred EEccCCcCC-CCCC----CCCCCcEEEecCCccCc-ccCc---ccccceeeccCCchhhhhhchhhcCEEECcCCccccc
Confidence 567778888 6775 26788888888887774 3321 2344444 4444444433
Q ss_pred CCCccccCCcceEEeccccccCcCCCc-cch-------hhhccccC-CCCcEEEeecccccccccccccccccccceEEe
Q 048125 62 VPSLENLHKLQRVIISQNHLGNYGEKD-NLE-------FVNSLVNA-SRLELLQISDNNFGGMLPEAVGNFSTRLGILSV 132 (258)
Q Consensus 62 ~~~~~~l~~L~~L~l~~~~~~~~~~~~-~~~-------~~~~~~~~-~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~l 132 (258)
+. ..++|+.|++++|.++..+..- .+. ....+..+ ++|+.|++++|.+. .+|.. +.+++.|++
T Consensus 298 P~---~p~~L~~LdLS~N~L~~Lp~lp~~L~~L~Ls~N~L~~LP~lp~~Lq~LdLS~N~Ls-~LP~l----p~~L~~L~L 369 (788)
T PRK15387 298 PV---LPPGLQELSVSDNQLASLPALPSELCKLWAYNNQLTSLPTLPSGLQELSVSDNQLA-SLPTL----PSELYKLWA 369 (788)
T ss_pred cc---cccccceeECCCCccccCCCCcccccccccccCccccccccccccceEecCCCccC-CCCCC----Ccccceehh
Confidence 22 2367888888888877643210 000 00001111 25777888877776 44432 246777777
Q ss_pred cccccCCccCccCCCCCcccEEEeeCCccccccCCcccCccCCcEEEecCCccccccCCCCCCCCCcceEeccccccccc
Q 048125 133 AENQLFGNIPSGLRNLVNLELLDLSGNQFTSRIPGSIGDLQKLQMLGLNGNKFLGEIPSSIGNLTLLMTLNFAENMLEGS 212 (258)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~ 212 (258)
+.|.+. .+|.. .++|+.|++++|.+.. .|.. .++|+.|++++|.+. .+|.. ..+|+.|++++|.+. .
T Consensus 370 s~N~L~-~LP~l---~~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Ls-sIP~l---~~~L~~L~Ls~NqLt-~ 436 (788)
T PRK15387 370 YNNRLT-SLPAL---PSGLKELIVSGNRLTS-LPVL---PSELKELMVSGNRLT-SLPML---PSGLLSLSVYRNQLT-R 436 (788)
T ss_pred hccccc-cCccc---ccccceEEecCCcccC-CCCc---ccCCCEEEccCCcCC-CCCcc---hhhhhhhhhccCccc-c
Confidence 777665 34432 3579999999999984 4543 357999999999998 46653 357889999999998 7
Q ss_pred CCcccccCcCCcEEeccCCcccccccccc
Q 048125 213 IPSSLGKCQNLIVLDLYNNNLSGTIPSEV 241 (258)
Q Consensus 213 ~~~~~~~~~~L~~L~l~~~~l~~~~~~~~ 241 (258)
+|..++.+++|..+++++|.+++..+..+
T Consensus 437 LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 437 LPESLIHLSSETTVNLEGNPLSERTLQAL 465 (788)
T ss_pred cChHHhhccCCCeEECCCCCCCchHHHHH
Confidence 89889999999999999999997766655
No 23
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.49 E-value=1.3e-15 Score=117.83 Aligned_cols=234 Identities=22% Similarity=0.309 Sum_probs=167.3
Q ss_pred CCCCceEEecCCccccc----ccccccCCCCCcEEEeecccCC----CCCC-------CccccCCcceEEeccccccCcC
Q 048125 21 LPNLEGLNLAGNQFTGP----IPVSISNASNLRELMIGKNGFS----GKVP-------SLENLHKLQRVIISQNHLGNYG 85 (258)
Q Consensus 21 ~~~L~~L~l~~~~~~~~----~~~~~~~~~~L~~L~l~~~~~~----~~~~-------~~~~l~~L~~L~l~~~~~~~~~ 85 (258)
+..+..++++++.+... +...+.+.+.|+..++++--.. ..+. .+.+.++|++|+|++|.+.+.+
T Consensus 29 ~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g 108 (382)
T KOG1909|consen 29 MDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKG 108 (382)
T ss_pred cCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccc
Confidence 67788999999988754 3334556677887777663221 1111 1355679999999999988765
Q ss_pred CCccchhhhccccCCCCcEEEeecccccccc----cc--------cccccccccceEEecccccCCc----cCccCCCCC
Q 048125 86 EKDNLEFVNSLVNASRLELLQISDNNFGGML----PE--------AVGNFSTRLGILSVAENQLFGN----IPSGLRNLV 149 (258)
Q Consensus 86 ~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~----~~--------~~~~~~~~l~~L~l~~~~~~~~----~~~~~~~~~ 149 (258)
.. .+..-+.++..|++|+|.+|.+.-.. .. ......+.|+++.+.+|...+. +...|...+
T Consensus 109 ~~---~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~ 185 (382)
T KOG1909|consen 109 IR---GLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQSHP 185 (382)
T ss_pred hH---HHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHHhcc
Confidence 55 44555677889999999999775211 11 1112225899999998876533 445667778
Q ss_pred cccEEEeeCCcccc----ccCCcccCccCCcEEEecCCcccc----ccCCCCCCCCCcceEecccccccccCCccc----
Q 048125 150 NLELLDLSGNQFTS----RIPGSIGDLQKLQMLGLNGNKFLG----EIPSSIGNLTLLMTLNFAENMLEGSIPSSL---- 217 (258)
Q Consensus 150 ~L~~L~l~~~~~~~----~~~~~~~~~~~L~~L~l~~~~~~~----~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~---- 217 (258)
.|+++.+.+|.|.. .....+.++++|+.|++.+|.++. .+...++..++|+.+++++|.+.......+
T Consensus 186 ~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al 265 (382)
T KOG1909|consen 186 TLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDAL 265 (382)
T ss_pred ccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHHHH
Confidence 99999999998862 234567889999999999998864 445667778899999999999875544433
Q ss_pred -ccCcCCcEEeccCCcccc----ccccccccccCcceeEecCCCCC
Q 048125 218 -GKCQNLIVLDLYNNNLSG----TIPSEVIGLSSLSIYLDLSQNQL 258 (258)
Q Consensus 218 -~~~~~L~~L~l~~~~l~~----~~~~~~~~~~~l~~~L~l~~n~~ 258 (258)
...+.|+.+.+.+|.|+. .+..++...|.+ ..|+|++|.+
T Consensus 266 ~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL-~kLnLngN~l 310 (382)
T KOG1909|consen 266 KESAPSLEVLELAGNEITRDAALALAACMAEKPDL-EKLNLNGNRL 310 (382)
T ss_pred hccCCCCceeccCcchhHHHHHHHHHHHHhcchhh-HHhcCCcccc
Confidence 337899999999999972 234556678888 9999999864
No 24
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.31 E-value=5.2e-14 Score=115.61 Aligned_cols=169 Identities=27% Similarity=0.451 Sum_probs=88.1
Q ss_pred EEEeecccCCCCCCCccccCCcceEEeccccccCcCCCccchhhhccccCCCCcEEEeecccccccccccccccccccce
Q 048125 50 ELMIGKNGFSGKVPSLENLHKLQRVIISQNHLGNYGEKDNLEFVNSLVNASRLELLQISDNNFGGMLPEAVGNFSTRLGI 129 (258)
Q Consensus 50 ~L~l~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~ 129 (258)
..+++.|++..++.+++.+..|+.+.++.|.+. .+++.+..+..|+.++++.|.+. .+|..++.++ |+.
T Consensus 79 ~aDlsrNR~~elp~~~~~f~~Le~liLy~n~~r--------~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp--Lkv 147 (722)
T KOG0532|consen 79 FADLSRNRFSELPEEACAFVSLESLILYHNCIR--------TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP--LKV 147 (722)
T ss_pred hhhccccccccCchHHHHHHHHHHHHHHhccce--------ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc--cee
Confidence 445555555555555555555555555555554 33444555555555555555554 5555555442 555
Q ss_pred EEecccccCCccCccCCCCCcccEEEeeCCccccccCCcccCccCCcEEEecCCccccccCCCCCCCCCcceEecccccc
Q 048125 130 LSVAENQLFGNIPSGLRNLVNLELLDLSGNQFTSRIPGSIGDLQKLQMLGLNGNKFLGEIPSSIGNLTLLMTLNFAENML 209 (258)
Q Consensus 130 L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~~ 209 (258)
|.++.|++. .+|+.++..+.|.+++.+.|.+. ..|..+..+..|+.|.+..|++. .+|+.+..+ .|.+||++.|.+
T Consensus 148 li~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNki 223 (722)
T KOG0532|consen 148 LIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKI 223 (722)
T ss_pred EEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCce
Confidence 555555554 44444455555555555555555 34444455555555555555544 334433322 245555555555
Q ss_pred cccCCcccccCcCCcEEeccCCccc
Q 048125 210 EGSIPSSLGKCQNLIVLDLYNNNLS 234 (258)
Q Consensus 210 ~~~~~~~~~~~~~L~~L~l~~~~l~ 234 (258)
. .+|..|..+..|++|.+.+|-+.
T Consensus 224 s-~iPv~fr~m~~Lq~l~LenNPLq 247 (722)
T KOG0532|consen 224 S-YLPVDFRKMRHLQVLQLENNPLQ 247 (722)
T ss_pred e-ecchhhhhhhhheeeeeccCCCC
Confidence 5 45555555555555555555555
No 25
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.29 E-value=6.2e-14 Score=115.18 Aligned_cols=212 Identities=24% Similarity=0.364 Sum_probs=168.8
Q ss_pred CCCcCcccCCCCcc-hhccCCCCceEEecCCcccccccccccCCCCCcEEEeecccCCCCCCCccccCCcceEEeccccc
Q 048125 3 DFPFNQLQGSLPSD-LGFTLPNLEGLNLAGNQFTGPIPVSISNASNLRELMIGKNGFSGKVPSLENLHKLQRVIISQNHL 81 (258)
Q Consensus 3 ~~~~~~~~~~~~~~-~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~L~~L~l~~~~~ 81 (258)
.+++..+. ..|.. +.+.+..-...+++.|.+. .+|..++.+-.|+.+.+++|.+...+..+..+..|..++++.|.+
T Consensus 56 ~Ls~rrlk-~fpr~a~~~~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r~ip~~i~~L~~lt~l~ls~Nql 133 (722)
T KOG0532|consen 56 LLSGRRLK-EFPRGAASYDLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIRTIPEAICNLEALTFLDLSSNQL 133 (722)
T ss_pred ccccchhh-cCCCccccccccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccceecchhhhhhhHHHHhhhccchh
Confidence 34444455 45542 2233555666777888777 677778888889999999999988888888999999999999988
Q ss_pred cCcCCCccchhhhccccCCCCcEEEeecccccccccccccccccccceEEecccccCCccCccCCCCCcccEEEeeCCcc
Q 048125 82 GNYGEKDNLEFVNSLVNASRLELLQISDNNFGGMLPEAVGNFSTRLGILSVAENQLFGNIPSGLRNLVNLELLDLSGNQF 161 (258)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~ 161 (258)
+ ..+..++.+| |+.|.+++|+++ .+|..++ ....+..|+++.|.+. .+|..++.+.+|+.+.+..|++
T Consensus 134 S--------~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig-~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l 201 (722)
T KOG0532|consen 134 S--------HLPDGLCDLP-LKVLIVSNNKLT-SLPEEIG-LLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHL 201 (722)
T ss_pred h--------cCChhhhcCc-ceeEEEecCccc-cCCcccc-cchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhh
Confidence 7 4566777777 899999999998 8888888 4468999999999876 6777788889999999999998
Q ss_pred ccccCCcccCccCCcEEEecCCccccccCCCCCCCCCcceEecccccccccCCccccc---CcCCcEEeccCCc
Q 048125 162 TSRIPGSIGDLQKLQMLGLNGNKFLGEIPSSIGNLTLLMTLNFAENMLEGSIPSSLGK---CQNLIVLDLYNNN 232 (258)
Q Consensus 162 ~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~---~~~L~~L~l~~~~ 232 (258)
. ..|..+..+ .|..|+++.|++. .+|-.|..+.+|++|-+.+|.++ ..|..++- ..-.++|+.+-|.
T Consensus 202 ~-~lp~El~~L-pLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~q 271 (722)
T KOG0532|consen 202 E-DLPEELCSL-PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ-SPPAQICEKGKVHIFKYLSTQACQ 271 (722)
T ss_pred h-hCCHHHhCC-ceeeeecccCcee-ecchhhhhhhhheeeeeccCCCC-CChHHHHhccceeeeeeecchhcc
Confidence 8 566666655 4999999999998 88999999999999999999998 67766643 3445678888773
No 26
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.28 E-value=4.8e-13 Score=106.72 Aligned_cols=209 Identities=22% Similarity=0.222 Sum_probs=128.6
Q ss_pred cCCCCceEEecCCccccccc-ccccCCCCCcEEEeecccCCCCCCC---ccccCCcceEEeccccccCcCCCccchhhhc
Q 048125 20 TLPNLEGLNLAGNQFTGPIP-VSISNASNLRELMIGKNGFSGKVPS---LENLHKLQRVIISQNHLGNYGEKDNLEFVNS 95 (258)
Q Consensus 20 ~~~~L~~L~l~~~~~~~~~~-~~~~~~~~L~~L~l~~~~~~~~~~~---~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~ 95 (258)
++.+|+++.+.++.+..... .....|++++.|+++.|-+....+. ...+++|+.|+++.|++...... ..
T Consensus 119 n~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s------~~ 192 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISS------NT 192 (505)
T ss_pred hHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccc------cc
Confidence 46778888888776653221 2345678888888888877543222 56778888888888877543222 11
Q ss_pred cccCCCCcEEEeecccccccccccccccccccceEEecccccCCccCccCCCCCcccEEEeeCCcccccc-CCcccCccC
Q 048125 96 LVNASRLELLQISDNNFGGMLPEAVGNFSTRLGILSVAENQLFGNIPSGLRNLVNLELLDLSGNQFTSRI-PGSIGDLQK 174 (258)
Q Consensus 96 ~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~-~~~~~~~~~ 174 (258)
...++.|+.|.++.|.++-.-...+....|+++.|++.+|.....-......++.|++|++++|++-... -.....++.
T Consensus 193 ~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~ 272 (505)
T KOG3207|consen 193 TLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPG 272 (505)
T ss_pred hhhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccc
Confidence 2246677888888887652111112222357888888877421111122234567888888888765221 134566788
Q ss_pred CcEEEecCCcccc-ccCCC-----CCCCCCcceEecccccccc-cCCcccccCcCCcEEeccCCccc
Q 048125 175 LQMLGLNGNKFLG-EIPSS-----IGNLTLLMTLNFAENMLEG-SIPSSLGKCQNLIVLDLYNNNLS 234 (258)
Q Consensus 175 L~~L~l~~~~~~~-~~~~~-----~~~~~~L~~L~l~~n~~~~-~~~~~~~~~~~L~~L~l~~~~l~ 234 (258)
|..|+++.+.+.+ ..|+. ...+++|+.|++..|.+.+ .....+...++|+.+.+..|.+.
T Consensus 273 L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln 339 (505)
T KOG3207|consen 273 LNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLN 339 (505)
T ss_pred hhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhccccccc
Confidence 8888888887765 22333 3557888888888888742 22233455677777777777775
No 27
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.28 E-value=3.8e-13 Score=107.29 Aligned_cols=184 Identities=21% Similarity=0.221 Sum_probs=77.7
Q ss_pred CCCCcEEEeecccCCCCCC--CccccCCcceEEeccccccCcCCCccchhhhccccCCCCcEEEeecccccccccccccc
Q 048125 45 ASNLRELMIGKNGFSGKVP--SLENLHKLQRVIISQNHLGNYGEKDNLEFVNSLVNASRLELLQISDNNFGGMLPEAVGN 122 (258)
Q Consensus 45 ~~~L~~L~l~~~~~~~~~~--~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~ 122 (258)
+.+|+.+.+.++....... ....+++++.|++++|-+..+. .+......+|+|+.|+++.|.+..-.......
T Consensus 120 ~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~-----~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~ 194 (505)
T KOG3207|consen 120 LKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWF-----PVLKIAEQLPSLENLNLSSNRLSNFISSNTTL 194 (505)
T ss_pred HHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHH-----HHHHHHHhcccchhcccccccccCCccccchh
Confidence 4455555555555443332 1344555555555555544332 22333444555555555555443111111111
Q ss_pred cccccceEEecccccCCc-cCccCCCCCcccEEEeeCCccccccCCcccCccCCcEEEecCCccccccC--CCCCCCCCc
Q 048125 123 FSTRLGILSVAENQLFGN-IPSGLRNLVNLELLDLSGNQFTSRIPGSIGDLQKLQMLGLNGNKFLGEIP--SSIGNLTLL 199 (258)
Q Consensus 123 ~~~~l~~L~l~~~~~~~~-~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~--~~~~~~~~L 199 (258)
..+.++.|.+.+|.++.. +......+|+++.|++.+|...........-+..|+.|+|++|.+.+ .+ ...+.++.|
T Consensus 195 ~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~-~~~~~~~~~l~~L 273 (505)
T KOG3207|consen 195 LLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLID-FDQGYKVGTLPGL 273 (505)
T ss_pred hhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccc-cccccccccccch
Confidence 123455555555544311 11122334555555555552111111222233445555555555442 11 123445555
Q ss_pred ceEeccccccccc-CCcc-----cccCcCCcEEeccCCccc
Q 048125 200 MTLNFAENMLEGS-IPSS-----LGKCQNLIVLDLYNNNLS 234 (258)
Q Consensus 200 ~~L~l~~n~~~~~-~~~~-----~~~~~~L~~L~l~~~~l~ 234 (258)
..|+++.+++... .|+. ....++|++|++..|+|.
T Consensus 274 ~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~ 314 (505)
T KOG3207|consen 274 NQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIR 314 (505)
T ss_pred hhhhccccCcchhcCCCccchhhhcccccceeeecccCccc
Confidence 5555555554321 1111 122455555555555554
No 28
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.27 E-value=6e-14 Score=108.81 Aligned_cols=232 Identities=19% Similarity=0.256 Sum_probs=160.1
Q ss_pred CCCCcCcccCCCCcchhc---cCCCCceEEecCCccccc-----------ccccccCCCCCcEEEeecccCCCCCCC---
Q 048125 2 FDFPFNQLQGSLPSDLGF---TLPNLEGLNLAGNQFTGP-----------IPVSISNASNLRELMIGKNGFSGKVPS--- 64 (258)
Q Consensus 2 l~~~~~~~~~~~~~~~~~---~~~~L~~L~l~~~~~~~~-----------~~~~~~~~~~L~~L~l~~~~~~~~~~~--- 64 (258)
+++++|.+-.+..+.+.. +-++|+..+++.- ++|. +.+.+.++++|+.++|++|.+.....+
T Consensus 35 l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~-ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g~~~l~ 113 (382)
T KOG1909|consen 35 LDLSGNTFGTEAARAIAKVLASKKELREVNLSDM-FTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKGIRGLE 113 (382)
T ss_pred EeccCCchhHHHHHHHHHHHhhcccceeeehHhh-hcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccchHHHH
Confidence 455555554333333222 2456777776643 3332 233456788999999999998654443
Q ss_pred --ccccCCcceEEeccccccCcCCCcc------chhhhccccCCCCcEEEeeccccccc---ccccccccccccceEEec
Q 048125 65 --LENLHKLQRVIISQNHLGNYGEKDN------LEFVNSLVNASRLELLQISDNNFGGM---LPEAVGNFSTRLGILSVA 133 (258)
Q Consensus 65 --~~~l~~L~~L~l~~~~~~~~~~~~~------~~~~~~~~~~~~L~~L~l~~~~~~~~---~~~~~~~~~~~l~~L~l~ 133 (258)
+..+..|++|.+.+|.+.+.+.... +........-++|+++....|.+... .....+...+.++.+.++
T Consensus 114 ~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~ 193 (382)
T KOG1909|consen 114 ELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLS 193 (382)
T ss_pred HHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHHhccccceEEEe
Confidence 5678899999999999887654420 11334456678899999999987522 122233344689999999
Q ss_pred ccccCCc----cCccCCCCCcccEEEeeCCcccc----ccCCcccCccCCcEEEecCCccccccC----CCC-CCCCCcc
Q 048125 134 ENQLFGN----IPSGLRNLVNLELLDLSGNQFTS----RIPGSIGDLQKLQMLGLNGNKFLGEIP----SSI-GNLTLLM 200 (258)
Q Consensus 134 ~~~~~~~----~~~~~~~~~~L~~L~l~~~~~~~----~~~~~~~~~~~L~~L~l~~~~~~~~~~----~~~-~~~~~L~ 200 (258)
.|.+... ....+..+++|+.|++..|.++. .....++.+++|+.|++++|-+...-. +++ ...|.|+
T Consensus 194 qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~ 273 (382)
T KOG1909|consen 194 QNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLE 273 (382)
T ss_pred cccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHHHHhccCCCCc
Confidence 9887543 34557789999999999998873 345567788999999999998865322 222 3479999
Q ss_pred eEeccccccccc----CCcccccCcCCcEEeccCCccc
Q 048125 201 TLNFAENMLEGS----IPSSLGKCQNLIVLDLYNNNLS 234 (258)
Q Consensus 201 ~L~l~~n~~~~~----~~~~~~~~~~L~~L~l~~~~l~ 234 (258)
.+.+.+|.|+.. +...+...+.|..|++.+|++.
T Consensus 274 vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 274 VLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred eeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 999999998642 2233455799999999999993
No 29
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.21 E-value=2e-11 Score=101.59 Aligned_cols=179 Identities=33% Similarity=0.493 Sum_probs=121.0
Q ss_pred ccCCCCCcEEEeecccCCCCCCCccccC-CcceEEeccccccCcCCCccchhhhccccCCCCcEEEeecccccccccccc
Q 048125 42 ISNASNLRELMIGKNGFSGKVPSLENLH-KLQRVIISQNHLGNYGEKDNLEFVNSLVNASRLELLQISDNNFGGMLPEAV 120 (258)
Q Consensus 42 ~~~~~~L~~L~l~~~~~~~~~~~~~~l~-~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~ 120 (258)
+.....++.|++.++.+....+...... +|+.|++++|.+.. ++..+..++.|+.|+++.|++. .++...
T Consensus 112 ~~~~~~l~~L~l~~n~i~~i~~~~~~~~~nL~~L~l~~N~i~~--------l~~~~~~l~~L~~L~l~~N~l~-~l~~~~ 182 (394)
T COG4886 112 LLELTNLTSLDLDNNNITDIPPLIGLLKSNLKELDLSDNKIES--------LPSPLRNLPNLKNLDLSFNDLS-DLPKLL 182 (394)
T ss_pred hhcccceeEEecCCcccccCccccccchhhcccccccccchhh--------hhhhhhccccccccccCCchhh-hhhhhh
Confidence 3445667788888887777666666664 78888888887763 2245667778888888888777 555443
Q ss_pred cccccccceEEecccccCCccCccCCCCCcccEEEeeCCccccccCCcccCccCCcEEEecCCccccccCCCCCCCCCcc
Q 048125 121 GNFSTRLGILSVAENQLFGNIPSGLRNLVNLELLDLSGNQFTSRIPGSIGDLQKLQMLGLNGNKFLGEIPSSIGNLTLLM 200 (258)
Q Consensus 121 ~~~~~~l~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~ 200 (258)
... +.++.++++++.+. .+|........|+++.+++|.+. ..+..+..++++..+.+.++++. ..+..+..++.++
T Consensus 183 ~~~-~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~ 258 (394)
T COG4886 183 SNL-SNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLE 258 (394)
T ss_pred hhh-hhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-eccchhccccccc
Confidence 233 46777888887776 44444344456778888877544 34556667777777777777765 3356667777788
Q ss_pred eEecccccccccCCcccccCcCCcEEeccCCcccc
Q 048125 201 TLNFAENMLEGSIPSSLGKCQNLIVLDLYNNNLSG 235 (258)
Q Consensus 201 ~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~~~l~~ 235 (258)
+|++++|.+.. ++. ++...+++.++++++.+..
T Consensus 259 ~L~~s~n~i~~-i~~-~~~~~~l~~L~~s~n~~~~ 291 (394)
T COG4886 259 TLDLSNNQISS-ISS-LGSLTNLRELDLSGNSLSN 291 (394)
T ss_pred eeccccccccc-ccc-ccccCccCEEeccCccccc
Confidence 88888888773 333 6677788888888877663
No 30
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.20 E-value=1.4e-11 Score=102.48 Aligned_cols=192 Identities=36% Similarity=0.491 Sum_probs=146.8
Q ss_pred EEEeecccCCCCCCCccccCCcceEEeccccccCcCCCccchhhhccccC-CCCcEEEeecccccccccccccccccccc
Q 048125 50 ELMIGKNGFSGKVPSLENLHKLQRVIISQNHLGNYGEKDNLEFVNSLVNA-SRLELLQISDNNFGGMLPEAVGNFSTRLG 128 (258)
Q Consensus 50 ~L~l~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~-~~L~~L~l~~~~~~~~~~~~~~~~~~~l~ 128 (258)
.+....+.+.........++.++.+.+.++.++... ...... ++|+.|++++|.+. .++..+..+ +.++
T Consensus 97 ~l~~~~~~~~~~~~~~~~~~~l~~L~l~~n~i~~i~--------~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l-~~L~ 166 (394)
T COG4886 97 SLDLNLNRLRSNISELLELTNLTSLDLDNNNITDIP--------PLIGLLKSNLKELDLSDNKIE-SLPSPLRNL-PNLK 166 (394)
T ss_pred eeeccccccccCchhhhcccceeEEecCCcccccCc--------cccccchhhcccccccccchh-hhhhhhhcc-cccc
Confidence 466666666444445556678999999999887543 233444 38999999999887 554445544 5899
Q ss_pred eEEecccccCCccCccCCCCCcccEEEeeCCccccccCCcccCccCCcEEEecCCccccccCCCCCCCCCcceEeccccc
Q 048125 129 ILSVAENQLFGNIPSGLRNLVNLELLDLSGNQFTSRIPGSIGDLQKLQMLGLNGNKFLGEIPSSIGNLTLLMTLNFAENM 208 (258)
Q Consensus 129 ~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~ 208 (258)
.|+++.|.+. .++......+.|+.+++++|.+. ..|........|+++.+++|.+. ..+..+..++.+..+.+.+|+
T Consensus 167 ~L~l~~N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~ 243 (394)
T COG4886 167 NLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNK 243 (394)
T ss_pred ccccCCchhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCce
Confidence 9999999887 45555447789999999999998 55655445667999999999654 556677888889999999999
Q ss_pred ccccCCcccccCcCCcEEeccCCccccccccccccccCcceeEecCCCCC
Q 048125 209 LEGSIPSSLGKCQNLIVLDLYNNNLSGTIPSEVIGLSSLSIYLDLSQNQL 258 (258)
Q Consensus 209 ~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~l~~~L~l~~n~~ 258 (258)
+. ..+..++.+++++++++++|.++ .++. +.....+ ++|++++|.+
T Consensus 244 ~~-~~~~~~~~l~~l~~L~~s~n~i~-~i~~-~~~~~~l-~~L~~s~n~~ 289 (394)
T COG4886 244 LE-DLPESIGNLSNLETLDLSNNQIS-SISS-LGSLTNL-RELDLSGNSL 289 (394)
T ss_pred ee-eccchhccccccceecccccccc-cccc-ccccCcc-CEEeccCccc
Confidence 87 44777788899999999999999 5555 8888899 9999998753
No 31
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.19 E-value=1.9e-11 Score=88.61 Aligned_cols=121 Identities=31% Similarity=0.363 Sum_probs=42.8
Q ss_pred ccceEEecccccCCccCccCC-CCCcccEEEeeCCccccccCCcccCccCCcEEEecCCccccccCCCC-CCCCCcceEe
Q 048125 126 RLGILSVAENQLFGNIPSGLR-NLVNLELLDLSGNQFTSRIPGSIGDLQKLQMLGLNGNKFLGEIPSSI-GNLTLLMTLN 203 (258)
Q Consensus 126 ~l~~L~l~~~~~~~~~~~~~~-~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~-~~~~~L~~L~ 203 (258)
.++.|++.++.+.. + +.+. .+.+|+.|++++|.+... . .+..++.|++|++++|.+++ +.+.+ ..+++|++|+
T Consensus 20 ~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~~l-~-~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~L~~L~ 94 (175)
T PF14580_consen 20 KLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQITKL-E-GLPGLPRLKTLDLSNNRISS-ISEGLDKNLPNLQELY 94 (175)
T ss_dssp ------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S--CHHHHHH-TT--EEE
T ss_pred cccccccccccccc-c-cchhhhhcCCCEEECCCCCCccc-c-CccChhhhhhcccCCCCCCc-cccchHHhCCcCCEEE
Confidence 56778888877752 2 2343 456778888888877732 2 46667788888888888773 33333 3567788888
Q ss_pred ccccccccc-CCcccccCcCCcEEeccCCcccccc---ccccccccCcceeEe
Q 048125 204 FAENMLEGS-IPSSLGKCQNLIVLDLYNNNLSGTI---PSEVIGLSSLSIYLD 252 (258)
Q Consensus 204 l~~n~~~~~-~~~~~~~~~~L~~L~l~~~~l~~~~---~~~~~~~~~l~~~L~ 252 (258)
+++|.|.+. ....+..+++|+.|++.+|.+...- ...+..+|+| +.||
T Consensus 95 L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~L-k~LD 146 (175)
T PF14580_consen 95 LSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSL-KVLD 146 (175)
T ss_dssp -TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT--SEET
T ss_pred CcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChh-heeC
Confidence 888887532 1234566788888888888776321 1345667777 7666
No 32
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.16 E-value=9e-12 Score=95.46 Aligned_cols=126 Identities=29% Similarity=0.324 Sum_probs=66.6
Q ss_pred ccceEEecccccCCccCccCCCCCcccEEEeeCCccccccCCcccCccCCcEEEecCCccccccCCCCCCCCCcceEecc
Q 048125 126 RLGILSVAENQLFGNIPSGLRNLVNLELLDLSGNQFTSRIPGSIGDLQKLQMLGLNGNKFLGEIPSSIGNLTLLMTLNFA 205 (258)
Q Consensus 126 ~l~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~ 205 (258)
.++.++++.|.++ .+.+.+.-.|.++.|+++.|.+..+. .+..+++|+.|++++|.+. .+..+-..+-++++|.++
T Consensus 285 ~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v~--nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La 360 (490)
T KOG1259|consen 285 ELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTVQ--NLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLA 360 (490)
T ss_pred hhhhccccccchh-hhhhhhhhccceeEEeccccceeeeh--hhhhcccceEeecccchhH-hhhhhHhhhcCEeeeehh
Confidence 3555566665554 34444555556666666666555321 1455566666666666555 233333445555666666
Q ss_pred cccccccCCcccccCcCCcEEeccCCccccccc-cccccccCcceeEecCCCCC
Q 048125 206 ENMLEGSIPSSLGKCQNLIVLDLYNNNLSGTIP-SEVIGLSSLSIYLDLSQNQL 258 (258)
Q Consensus 206 ~n~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~-~~~~~~~~l~~~L~l~~n~~ 258 (258)
+|.+. ....++.+-+|..|++++|+|..... ..++.+|-+ ..+.+.+||+
T Consensus 361 ~N~iE--~LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCL-E~l~L~~NPl 411 (490)
T KOG1259|consen 361 QNKIE--TLSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCL-ETLRLTGNPL 411 (490)
T ss_pred hhhHh--hhhhhHhhhhheeccccccchhhHHHhcccccccHH-HHHhhcCCCc
Confidence 66654 22344555556666666666652221 345555555 5555555553
No 33
>PLN03150 hypothetical protein; Provisional
Probab=99.14 E-value=7.6e-11 Score=102.92 Aligned_cols=107 Identities=35% Similarity=0.577 Sum_probs=92.4
Q ss_pred cccEEEeeCCccccccCCcccCccCCcEEEecCCccccccCCCCCCCCCcceEecccccccccCCcccccCcCCcEEecc
Q 048125 150 NLELLDLSGNQFTSRIPGSIGDLQKLQMLGLNGNKFLGEIPSSIGNLTLLMTLNFAENMLEGSIPSSLGKCQNLIVLDLY 229 (258)
Q Consensus 150 ~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~ 229 (258)
.++.|+++++.+.+..|..+..+++|+.|++++|.+.+.+|..+..+++|+.|++++|.+.+.+|..++.+++|+.|+++
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 36788889988888888888899999999999999988888889999999999999999988899999999999999999
Q ss_pred CCcccccccccccccc-CcceeEecCCCC
Q 048125 230 NNNLSGTIPSEVIGLS-SLSIYLDLSQNQ 257 (258)
Q Consensus 230 ~~~l~~~~~~~~~~~~-~l~~~L~l~~n~ 257 (258)
+|++++.+|..+.... .+ ..+++.+|+
T Consensus 499 ~N~l~g~iP~~l~~~~~~~-~~l~~~~N~ 526 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHR-ASFNFTDNA 526 (623)
T ss_pred CCcccccCChHHhhccccC-ceEEecCCc
Confidence 9999988888776543 44 678888775
No 34
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.09 E-value=4.3e-11 Score=86.79 Aligned_cols=124 Identities=27% Similarity=0.307 Sum_probs=37.2
Q ss_pred CCCcEEEeecccCCCCCCCcc-ccCCcceEEeccccccCcCCCccchhhhccccCCCCcEEEeecccccccccccccccc
Q 048125 46 SNLRELMIGKNGFSGKVPSLE-NLHKLQRVIISQNHLGNYGEKDNLEFVNSLVNASRLELLQISDNNFGGMLPEAVGNFS 124 (258)
Q Consensus 46 ~~L~~L~l~~~~~~~~~~~~~-~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~ 124 (258)
.++++|++.++.+.... .++ .+.+|+.|++++|.++.+ +.+..+++|+.|++++|.+. .+...+...+
T Consensus 19 ~~~~~L~L~~n~I~~Ie-~L~~~l~~L~~L~Ls~N~I~~l---------~~l~~L~~L~~L~L~~N~I~-~i~~~l~~~l 87 (175)
T PF14580_consen 19 VKLRELNLRGNQISTIE-NLGATLDKLEVLDLSNNQITKL---------EGLPGLPRLKTLDLSNNRIS-SISEGLDKNL 87 (175)
T ss_dssp ------------------S--TT-TT--EEE-TTS--S-----------TT----TT--EEE--SS----S-CHHHHHH-
T ss_pred ccccccccccccccccc-chhhhhcCCCEEECCCCCCccc---------cCccChhhhhhcccCCCCCC-ccccchHHhC
Confidence 34555555555554432 232 345566666666665432 23444566666666666665 3332222222
Q ss_pred cccceEEecccccCCcc-CccCCCCCcccEEEeeCCcccccc---CCcccCccCCcEEEe
Q 048125 125 TRLGILSVAENQLFGNI-PSGLRNLVNLELLDLSGNQFTSRI---PGSIGDLQKLQMLGL 180 (258)
Q Consensus 125 ~~l~~L~l~~~~~~~~~-~~~~~~~~~L~~L~l~~~~~~~~~---~~~~~~~~~L~~L~l 180 (258)
++|+.|++++|.+.+.. -..+..+++|++|++.+|++.... ...+..+|+|+.||-
T Consensus 88 p~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 88 PNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETT
T ss_pred CcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCC
Confidence 46667777666664321 133455677777777777776321 123455677777764
No 35
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=99.07 E-value=2.8e-10 Score=68.19 Aligned_cols=59 Identities=37% Similarity=0.511 Sum_probs=29.7
Q ss_pred cccEEEeeCCccccccCCcccCccCCcEEEecCCccccccCCCCCCCCCcceEeccccc
Q 048125 150 NLELLDLSGNQFTSRIPGSIGDLQKLQMLGLNGNKFLGEIPSSIGNLTLLMTLNFAENM 208 (258)
Q Consensus 150 ~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~ 208 (258)
+|++|++++|.+....+..|.++++|++|++++|.++...+.+|..+++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 44555555555544444455555555555555555544444455555555555555544
No 36
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=99.07 E-value=1.7e-10 Score=69.15 Aligned_cols=59 Identities=41% Similarity=0.539 Sum_probs=29.0
Q ss_pred CcceEecccccccccCCcccccCcCCcEEeccCCccccccccccccccCcceeEecCCCC
Q 048125 198 LLMTLNFAENMLEGSIPSSLGKCQNLIVLDLYNNNLSGTIPSEVIGLSSLSIYLDLSQNQ 257 (258)
Q Consensus 198 ~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~~~~~~l~~~L~l~~n~ 257 (258)
+|++|++++|.+....+..+..+++|++|++++|+++...+..|..++++ ++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L-~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNL-RYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTE-SEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCC-CEEeCcCCc
Confidence 34455555555543333444445555555555555553333445555555 555555554
No 37
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.02 E-value=7.6e-11 Score=90.44 Aligned_cols=190 Identities=24% Similarity=0.246 Sum_probs=128.0
Q ss_pred cccccCCCCCcEEEeecccCCCCCCCccccCCcceEEeccccccCcCCCcc------c----------hhhhccccCCCC
Q 048125 39 PVSISNASNLRELMIGKNGFSGKVPSLENLHKLQRVIISQNHLGNYGEKDN------L----------EFVNSLVNASRL 102 (258)
Q Consensus 39 ~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~------~----------~~~~~~~~~~~L 102 (258)
|..+.-+++|..+.++.|.-.........-|.|+.+......+........ . .....+--.+.|
T Consensus 207 ~f~l~~f~~l~~~~~s~~~~~~i~~~~~~kptl~t~~v~~s~~~~~~~l~pe~~~~D~~~~E~~t~~G~~~~~~dTWq~L 286 (490)
T KOG1259|consen 207 SFNLNAFRNLKTLKFSALSTENIVDIELLKPTLQTICVHNTTIQDVPSLLPETILADPSGSEPSTSNGSALVSADTWQEL 286 (490)
T ss_pred ccchHHhhhhheeeeeccchhheeceeecCchhheeeeecccccccccccchhhhcCccCCCCCccCCceEEecchHhhh
Confidence 333444566777777776544322222233556666655443332211100 0 011122334568
Q ss_pred cEEEeecccccccccccccccccccceEEecccccCCccCccCCCCCcccEEEeeCCccccccCCcccCccCCcEEEecC
Q 048125 103 ELLQISDNNFGGMLPEAVGNFSTRLGILSVAENQLFGNIPSGLRNLVNLELLDLSGNQFTSRIPGSIGDLQKLQMLGLNG 182 (258)
Q Consensus 103 ~~L~l~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~ 182 (258)
+.+++++|.+. .+...+. +.|.++.|+++.|.+... ..+..+++|++||+++|.+. ...++-..+.++++|.+.+
T Consensus 287 telDLS~N~I~-~iDESvK-L~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La~ 361 (490)
T KOG1259|consen 287 TELDLSGNLIT-QIDESVK-LAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLAQ 361 (490)
T ss_pred hhccccccchh-hhhhhhh-hccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhhcCEeeeehhh
Confidence 89999999887 5555544 346999999999988632 22667889999999999988 5566777888999999999
Q ss_pred CccccccCCCCCCCCCcceEecccccccc-cCCcccccCcCCcEEeccCCcccc
Q 048125 183 NKFLGEIPSSIGNLTLLMTLNFAENMLEG-SIPSSLGKCQNLIVLDLYNNNLSG 235 (258)
Q Consensus 183 ~~~~~~~~~~~~~~~~L~~L~l~~n~~~~-~~~~~~~~~~~L~~L~l~~~~l~~ 235 (258)
|.+.+. ..++.+=+|..||+.+|+|.. .-...++++|.|+.+.+.+|.+..
T Consensus 362 N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 362 NKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred hhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccc
Confidence 988632 456777889999999999863 233567899999999999998873
No 38
>PLN03150 hypothetical protein; Provisional
Probab=98.95 E-value=1.4e-09 Score=95.13 Aligned_cols=108 Identities=34% Similarity=0.552 Sum_probs=95.7
Q ss_pred cceEEecccccCCccCccCCCCCcccEEEeeCCccccccCCcccCccCCcEEEecCCccccccCCCCCCCCCcceEeccc
Q 048125 127 LGILSVAENQLFGNIPSGLRNLVNLELLDLSGNQFTSRIPGSIGDLQKLQMLGLNGNKFLGEIPSSIGNLTLLMTLNFAE 206 (258)
Q Consensus 127 l~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~ 206 (258)
++.|++.++.+...+|..+..+++|++|++++|.+.+..|..+..+++|+.|++++|.+.+.+|+.++.+++|+.|++++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 67888888888777888888999999999999999888888899999999999999999989999999999999999999
Q ss_pred ccccccCCcccccC-cCCcEEeccCCccc
Q 048125 207 NMLEGSIPSSLGKC-QNLIVLDLYNNNLS 234 (258)
Q Consensus 207 n~~~~~~~~~~~~~-~~L~~L~l~~~~l~ 234 (258)
|.+.+.+|..+... .++..+++.+|...
T Consensus 500 N~l~g~iP~~l~~~~~~~~~l~~~~N~~l 528 (623)
T PLN03150 500 NSLSGRVPAALGGRLLHRASFNFTDNAGL 528 (623)
T ss_pred CcccccCChHHhhccccCceEEecCCccc
Confidence 99998999887653 46778888888654
No 39
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.77 E-value=5.2e-11 Score=91.10 Aligned_cols=194 Identities=20% Similarity=0.158 Sum_probs=125.8
Q ss_pred CCceEEecCCccccc-ccccccCCCCCcEEEeecccCCCCCCC-ccccCCcceEEeccc-cccCcCCCccchhhhccccC
Q 048125 23 NLEGLNLAGNQFTGP-IPVSISNASNLRELMIGKNGFSGKVPS-LENLHKLQRVIISQN-HLGNYGEKDNLEFVNSLVNA 99 (258)
Q Consensus 23 ~L~~L~l~~~~~~~~-~~~~~~~~~~L~~L~l~~~~~~~~~~~-~~~l~~L~~L~l~~~-~~~~~~~~~~~~~~~~~~~~ 99 (258)
.|++++++...++.. .-.-+..|.+|+-|.+.+..+.+.+.. +++..+|+.|+++.+ .++.. .....+..|
T Consensus 186 Rlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n------~~~ll~~sc 259 (419)
T KOG2120|consen 186 RLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTEN------ALQLLLSSC 259 (419)
T ss_pred hhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchh------HHHHHHHhh
Confidence 488888888777632 222356788899999999888764444 788888999988875 23321 334456778
Q ss_pred CCCcEEEeecccccccc-cccccccccccceEEecccccC---CccCccCCCCCcccEEEeeCCc-cccccCCcccCccC
Q 048125 100 SRLELLQISDNNFGGML-PEAVGNFSTRLGILSVAENQLF---GNIPSGLRNLVNLELLDLSGNQ-FTSRIPGSIGDLQK 174 (258)
Q Consensus 100 ~~L~~L~l~~~~~~~~~-~~~~~~~~~~l~~L~l~~~~~~---~~~~~~~~~~~~L~~L~l~~~~-~~~~~~~~~~~~~~ 174 (258)
..|..|+++.|...... ...+....++++.|+++++.-. ..+....+.++.+.+||++.|. +.......|..++.
T Consensus 260 s~L~~LNlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~ 339 (419)
T KOG2120|consen 260 SRLDELNLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNY 339 (419)
T ss_pred hhHhhcCchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcch
Confidence 88999999988665322 2223333367888888876432 1222334678899999999874 33333345567888
Q ss_pred CcEEEecCCccccccCC---CCCCCCCcceEecccccccccCCcccccCcCCc
Q 048125 175 LQMLGLNGNKFLGEIPS---SIGNLTLLMTLNFAENMLEGSIPSSLGKCQNLI 224 (258)
Q Consensus 175 L~~L~l~~~~~~~~~~~---~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~ 224 (258)
|++|.++.|.. ..|. .+...|.|.+|++.++--.+...-....+++|+
T Consensus 340 L~~lSlsRCY~--i~p~~~~~l~s~psl~yLdv~g~vsdt~mel~~e~~~~lk 390 (419)
T KOG2120|consen 340 LQHLSLSRCYD--IIPETLLELNSKPSLVYLDVFGCVSDTTMELLKEMLSHLK 390 (419)
T ss_pred heeeehhhhcC--CChHHeeeeccCcceEEEEeccccCchHHHHHHHhCcccc
Confidence 99999988763 3444 356788999999888754322222223455554
No 40
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.73 E-value=7.3e-10 Score=92.63 Aligned_cols=175 Identities=27% Similarity=0.319 Sum_probs=75.9
Q ss_pred ccCCCCCcEEEeecccCCCCCCCccccCCcceEEeccccccCcCCCccchhhhccccCCCCcEEEeeccccccccccccc
Q 048125 42 ISNASNLRELMIGKNGFSGKVPSLENLHKLQRVIISQNHLGNYGEKDNLEFVNSLVNASRLELLQISDNNFGGMLPEAVG 121 (258)
Q Consensus 42 ~~~~~~L~~L~l~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~ 121 (258)
+..+.+|+.|++.+|.+......+..+++|++|++++|.++.+. .+..++.|+.|++++|.+. .+.. +.
T Consensus 91 l~~~~~l~~l~l~~n~i~~i~~~l~~~~~L~~L~ls~N~I~~i~---------~l~~l~~L~~L~l~~N~i~-~~~~-~~ 159 (414)
T KOG0531|consen 91 LSKLKSLEALDLYDNKIEKIENLLSSLVNLQVLDLSFNKITKLE---------GLSTLTLLKELNLSGNLIS-DISG-LE 159 (414)
T ss_pred cccccceeeeeccccchhhcccchhhhhcchheecccccccccc---------chhhccchhhheeccCcch-hccC-Cc
Confidence 34445555555555555443332444555555555555554321 2223333555555555444 2111 11
Q ss_pred ccccccceEEecccccCCccC-ccCCCCCcccEEEeeCCccccccCCcccCccCCcEEEecCCccccccCCCCCCCC--C
Q 048125 122 NFSTRLGILSVAENQLFGNIP-SGLRNLVNLELLDLSGNQFTSRIPGSIGDLQKLQMLGLNGNKFLGEIPSSIGNLT--L 198 (258)
Q Consensus 122 ~~~~~l~~L~l~~~~~~~~~~-~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~--~ 198 (258)
. ...++.+++++|.+...-. . ...+.+++++.+.+|.+... ..+..+..+..+++..|.+...-+ +.... +
T Consensus 160 ~-l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i--~~~~~~~~l~~~~l~~n~i~~~~~--l~~~~~~~ 233 (414)
T KOG0531|consen 160 S-LKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREI--EGLDLLKKLVLLSLLDNKISKLEG--LNELVMLH 233 (414)
T ss_pred c-chhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcc--cchHHHHHHHHhhcccccceeccC--cccchhHH
Confidence 1 1344555555554432111 0 23334455555555544321 112222233333444444432111 11112 2
Q ss_pred cceEecccccccccCCcccccCcCCcEEeccCCccc
Q 048125 199 LMTLNFAENMLEGSIPSSLGKCQNLIVLDLYNNNLS 234 (258)
Q Consensus 199 L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~~~l~ 234 (258)
|+.+++++|++. ..+..+..+.++..+++..+++.
T Consensus 234 L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~ 268 (414)
T KOG0531|consen 234 LRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRIS 268 (414)
T ss_pred HHHHhcccCccc-cccccccccccccccchhhcccc
Confidence 566666666665 23244455666666666666655
No 41
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.70 E-value=9.1e-10 Score=92.05 Aligned_cols=173 Identities=26% Similarity=0.309 Sum_probs=73.7
Q ss_pred CCCCceEEecCCcccccccccccCCCCCcEEEeecccCCCCCCCccccCCcceEEeccccccCcCCCccchhhhccccCC
Q 048125 21 LPNLEGLNLAGNQFTGPIPVSISNASNLRELMIGKNGFSGKVPSLENLHKLQRVIISQNHLGNYGEKDNLEFVNSLVNAS 100 (258)
Q Consensus 21 ~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~ 100 (258)
+.+++.+++..+.+..+.. .+..+.+|++|++++|.+.... .+..++.|+.|++.+|.+..+. .+..++
T Consensus 94 ~~~l~~l~l~~n~i~~i~~-~l~~~~~L~~L~ls~N~I~~i~-~l~~l~~L~~L~l~~N~i~~~~---------~~~~l~ 162 (414)
T KOG0531|consen 94 LKSLEALDLYDNKIEKIEN-LLSSLVNLQVLDLSFNKITKLE-GLSTLTLLKELNLSGNLISDIS---------GLESLK 162 (414)
T ss_pred ccceeeeeccccchhhccc-chhhhhcchheecccccccccc-chhhccchhhheeccCcchhcc---------CCccch
Confidence 4555555555555543211 1344555555555555554322 2334444555555555554332 222245
Q ss_pred CCcEEEeecccccccccccccccccccceEEecccccCCccCccCCCCCcccEEEeeCCccccccCCcccCcc--CCcEE
Q 048125 101 RLELLQISDNNFGGMLPEAVGNFSTRLGILSVAENQLFGNIPSGLRNLVNLELLDLSGNQFTSRIPGSIGDLQ--KLQML 178 (258)
Q Consensus 101 ~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~--~L~~L 178 (258)
.|+.+++++|.+...-+.... ...+++.+.+.++.+... +.+.....+..+++..|.+....+ +.... +|+.+
T Consensus 163 ~L~~l~l~~n~i~~ie~~~~~-~~~~l~~l~l~~n~i~~i--~~~~~~~~l~~~~l~~n~i~~~~~--l~~~~~~~L~~l 237 (414)
T KOG0531|consen 163 SLKLLDLSYNRIVDIENDELS-ELISLEELDLGGNSIREI--EGLDLLKKLVLLSLLDNKISKLEG--LNELVMLHLREL 237 (414)
T ss_pred hhhcccCCcchhhhhhhhhhh-hccchHHHhccCCchhcc--cchHHHHHHHHhhcccccceeccC--cccchhHHHHHH
Confidence 555555555554422110011 113455555555544311 112222233333444444442111 11111 25555
Q ss_pred EecCCccccccCCCCCCCCCcceEeccccccc
Q 048125 179 GLNGNKFLGEIPSSIGNLTLLMTLNFAENMLE 210 (258)
Q Consensus 179 ~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~ 210 (258)
.+.++.+. ..+..+..+..+..+++.++.+.
T Consensus 238 ~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~ 268 (414)
T KOG0531|consen 238 YLSGNRIS-RSPEGLENLKNLPVLDLSSNRIS 268 (414)
T ss_pred hcccCccc-cccccccccccccccchhhcccc
Confidence 55555554 22234444555555555555543
No 42
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.65 E-value=2.2e-10 Score=97.34 Aligned_cols=126 Identities=33% Similarity=0.310 Sum_probs=85.8
Q ss_pred ccceEEecccccCCccCccCCCCCcccEEEeeCCccccccCCcccCccCCcEEEecCCccccccCCCCCCCCCcceEecc
Q 048125 126 RLGILSVAENQLFGNIPSGLRNLVNLELLDLSGNQFTSRIPGSIGDLQKLQMLGLNGNKFLGEIPSSIGNLTLLMTLNFA 205 (258)
Q Consensus 126 ~l~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~ 205 (258)
.|...++++|... .+...+.-++.++.|+++.|++++.. .++.++.|++|+|+.|+++ .+|..-..-.+|+.|+++
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~L~~L~lr 240 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLR-HVPQLSMVGCKLQLLNLR 240 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhc-cccccchhhhhheeeeec
Confidence 3455555555544 34455666778888888888887432 6777888888888888877 555433222348888888
Q ss_pred cccccccCCcccccCcCCcEEeccCCccccccc-cccccccCcceeEecCCCCC
Q 048125 206 ENMLEGSIPSSLGKCQNLIVLDLYNNNLSGTIP-SEVIGLSSLSIYLDLSQNQL 258 (258)
Q Consensus 206 ~n~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~-~~~~~~~~l~~~L~l~~n~~ 258 (258)
+|.++ -...+.++.+|..||++.|-|.+.-. .-++.+..| ++|.|.|||+
T Consensus 241 nN~l~--tL~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L-~~L~LeGNPl 291 (1096)
T KOG1859|consen 241 NNALT--TLRGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSL-IVLWLEGNPL 291 (1096)
T ss_pred ccHHH--hhhhHHhhhhhhccchhHhhhhcchhhhHHHHHHHH-HHHhhcCCcc
Confidence 88876 33456778888888888887774322 235667777 8888888875
No 43
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.63 E-value=2.5e-08 Score=89.72 Aligned_cols=92 Identities=25% Similarity=0.325 Sum_probs=59.1
Q ss_pred CCCcchhccCCCCceEEecCCcccccccccccCCCCCcEEEeecccCCCCCCCccccCCcceEEeccccccCcCCCccch
Q 048125 12 SLPSDLGFTLPNLEGLNLAGNQFTGPIPVSISNASNLRELMIGKNGFSGKVPSLENLHKLQRVIISQNHLGNYGEKDNLE 91 (258)
Q Consensus 12 ~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~ 91 (258)
.++..++..+|.|+.|++++|.-.+.+|..++++-+|++|+++++.+...+..+..+..|.+|++..+.... .
T Consensus 561 ~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~~LP~~l~~Lk~L~~Lnl~~~~~l~-------~ 633 (889)
T KOG4658|consen 561 EISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGISHLPSGLGNLKKLIYLNLEVTGRLE-------S 633 (889)
T ss_pred hcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCccccchHHHHHHhhheeccccccccc-------c
Confidence 455555666777777777776554567777777777777777777777666667777777777776654332 1
Q ss_pred hhhccccCCCCcEEEeecc
Q 048125 92 FVNSLVNASRLELLQISDN 110 (258)
Q Consensus 92 ~~~~~~~~~~L~~L~l~~~ 110 (258)
.+.....+++|++|.+...
T Consensus 634 ~~~i~~~L~~Lr~L~l~~s 652 (889)
T KOG4658|consen 634 IPGILLELQSLRVLRLPRS 652 (889)
T ss_pred ccchhhhcccccEEEeecc
Confidence 1223444667777776554
No 44
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.63 E-value=9.2e-09 Score=79.02 Aligned_cols=184 Identities=16% Similarity=0.110 Sum_probs=86.9
Q ss_pred CCCCCcEEEeecccCCCCCCC---ccccCCcceEEeccccccCcCCCccchhhhcc-ccCCCCcEEEeeccccccccccc
Q 048125 44 NASNLRELMIGKNGFSGKVPS---LENLHKLQRVIISQNHLGNYGEKDNLEFVNSL-VNASRLELLQISDNNFGGMLPEA 119 (258)
Q Consensus 44 ~~~~L~~L~l~~~~~~~~~~~---~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~-~~~~~L~~L~l~~~~~~~~~~~~ 119 (258)
.+..++++++.+|.+++.... +..+|.|+.|++++|.+.+. +... ....+|+++.+.+..+.-.....
T Consensus 69 ~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~--------I~~lp~p~~nl~~lVLNgT~L~w~~~~s 140 (418)
T KOG2982|consen 69 SVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSD--------IKSLPLPLKNLRVLVLNGTGLSWTQSTS 140 (418)
T ss_pred HhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCc--------cccCcccccceEEEEEcCCCCChhhhhh
Confidence 345566666666665432221 45556666666666655431 1111 23345555655555432111111
Q ss_pred ccccccccceEEecccccCC--ccCccCC-CCCcccEEEeeCCcccc--ccCCcccCccCCcEEEecCCccccccC-CCC
Q 048125 120 VGNFSTRLGILSVAENQLFG--NIPSGLR-NLVNLELLDLSGNQFTS--RIPGSIGDLQKLQMLGLNGNKFLGEIP-SSI 193 (258)
Q Consensus 120 ~~~~~~~l~~L~l~~~~~~~--~~~~~~~-~~~~L~~L~l~~~~~~~--~~~~~~~~~~~L~~L~l~~~~~~~~~~-~~~ 193 (258)
.-...|.+++|+++.|.+.. ...+... .-+.+++++..+|.... .....-+.++++..+.+..|.+++.-. ..+
T Consensus 141 ~l~~lP~vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~Fpnv~sv~v~e~PlK~~s~ek~s 220 (418)
T KOG2982|consen 141 SLDDLPKVTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRIFPNVNSVFVCEGPLKTESSEKGS 220 (418)
T ss_pred hhhcchhhhhhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhhcccchheeeecCcccchhhcccC
Confidence 22222455555555553211 0111111 12245555555554321 111222345666666676666654222 233
Q ss_pred CCCCCcceEecccccccc-cCCcccccCcCCcEEeccCCcccc
Q 048125 194 GNLTLLMTLNFAENMLEG-SIPSSLGKCQNLIVLDLYNNNLSG 235 (258)
Q Consensus 194 ~~~~~L~~L~l~~n~~~~-~~~~~~~~~~~L~~L~l~~~~l~~ 235 (258)
..++.+.-|+++.+.+.. ...+.+.++++|+-|.++++.+.+
T Consensus 221 e~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d 263 (418)
T KOG2982|consen 221 EPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSD 263 (418)
T ss_pred CCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccc
Confidence 445555666777776641 223345566777777777776653
No 45
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.61 E-value=8e-09 Score=79.34 Aligned_cols=210 Identities=17% Similarity=0.151 Sum_probs=99.0
Q ss_pred ccCCCCCcEEEeecccCCCCCCC--c-cccCCcceEEeccccccCcCCCccchhhhccccCCCCcEEEeecccccccccc
Q 048125 42 ISNASNLRELMIGKNGFSGKVPS--L-ENLHKLQRVIISQNHLGNYGEKDNLEFVNSLVNASRLELLQISDNNFGGMLPE 118 (258)
Q Consensus 42 ~~~~~~L~~L~l~~~~~~~~~~~--~-~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~ 118 (258)
++..+.++.+.+.++.+...... + .....++++++.+|.++++. .+...+.++|.|+.|+++.|.+...+-
T Consensus 41 v~s~ra~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWs-----eI~~ile~lP~l~~LNls~N~L~s~I~- 114 (418)
T KOG2982|consen 41 VSSLRALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWS-----EIGAILEQLPALTTLNLSCNSLSSDIK- 114 (418)
T ss_pred eccccchhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHH-----HHHHHHhcCccceEeeccCCcCCCccc-
Confidence 33344455555556555432221 2 23455666667666666554 233345566666777776665542211
Q ss_pred cccccccccceEEecccccCCc-cCccCCCCCcccEEEeeCCcccc--ccCCcccCc-cCCcEEEecCCcccc--ccCCC
Q 048125 119 AVGNFSTRLGILSVAENQLFGN-IPSGLRNLVNLELLDLSGNQFTS--RIPGSIGDL-QKLQMLGLNGNKFLG--EIPSS 192 (258)
Q Consensus 119 ~~~~~~~~l~~L~l~~~~~~~~-~~~~~~~~~~L~~L~l~~~~~~~--~~~~~~~~~-~~L~~L~l~~~~~~~--~~~~~ 192 (258)
..-....+++.|.+.+....-. ....+..+|.+++++++.|.... ...+..... +.++++....|.... ..-..
T Consensus 115 ~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l 194 (418)
T KOG2982|consen 115 SLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKL 194 (418)
T ss_pred cCcccccceEEEEEcCCCCChhhhhhhhhcchhhhhhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhH
Confidence 1111113566666655443211 22233455666666666663321 111111222 245555555543210 00011
Q ss_pred CCCCCCcceEecccccccc-cCCcccccCcCCcEEeccCCcccc-ccccccccccCcceeEecCCCCC
Q 048125 193 IGNLTLLMTLNFAENMLEG-SIPSSLGKCQNLIVLDLYNNNLSG-TIPSEVIGLSSLSIYLDLSQNQL 258 (258)
Q Consensus 193 ~~~~~~L~~L~l~~n~~~~-~~~~~~~~~~~L~~L~l~~~~l~~-~~~~~~~~~~~l~~~L~l~~n~~ 258 (258)
-+-+|++..+-+..|++.. .........+.+..|+++.+.|.+ .--+.+...+.+ +-|.++.||+
T Consensus 195 ~r~Fpnv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l-~dlRv~~~Pl 261 (418)
T KOG2982|consen 195 SRIFPNVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQL-VDLRVSENPL 261 (418)
T ss_pred HhhcccchheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchh-heeeccCCcc
Confidence 1334556666666665531 222334445566666666666652 112345556666 6666666553
No 46
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.57 E-value=3.5e-10 Score=86.68 Aligned_cols=177 Identities=20% Similarity=0.226 Sum_probs=116.8
Q ss_pred CCcEEEeecccCCCCCCC--ccccCCcceEEeccccccCcCCCccchhhhccccCCCCcEEEeeccc-cccccccccccc
Q 048125 47 NLRELMIGKNGFSGKVPS--LENLHKLQRVIISQNHLGNYGEKDNLEFVNSLVNASRLELLQISDNN-FGGMLPEAVGNF 123 (258)
Q Consensus 47 ~L~~L~l~~~~~~~~~~~--~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~-~~~~~~~~~~~~ 123 (258)
+|+++++++..++..... +..+.+|+.|.+.++.+.+ .+...+..-..|+.++++.+. ++......++..
T Consensus 186 Rlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD-------~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~s 258 (419)
T KOG2120|consen 186 RLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDD-------PIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSS 258 (419)
T ss_pred hhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCc-------HHHHHHhccccceeeccccccccchhHHHHHHHh
Confidence 588899988877643333 5677888889898888876 666677777889999988874 443333445555
Q ss_pred ccccceEEecccccCCcc-CccCC-CCCcccEEEeeCCccc--c-ccCCcccCccCCcEEEecCCccc-cccCCCCCCCC
Q 048125 124 STRLGILSVAENQLFGNI-PSGLR-NLVNLELLDLSGNQFT--S-RIPGSIGDLQKLQMLGLNGNKFL-GEIPSSIGNLT 197 (258)
Q Consensus 124 ~~~l~~L~l~~~~~~~~~-~~~~~-~~~~L~~L~l~~~~~~--~-~~~~~~~~~~~L~~L~l~~~~~~-~~~~~~~~~~~ 197 (258)
+..|..|+++-|...... ...+. .-+.++.|+++|+.-. . ...-..+.++++.+|++++|-.. ...-.+|-+++
T Consensus 259 cs~L~~LNlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~ 338 (419)
T KOG2120|consen 259 CSRLDELNLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFN 338 (419)
T ss_pred hhhHhhcCchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcc
Confidence 567888888877553221 11111 2347788888876321 1 11223356888999999887542 22223456788
Q ss_pred CcceEecccccccccCCcc---cccCcCCcEEeccCCc
Q 048125 198 LLMTLNFAENMLEGSIPSS---LGKCQNLIVLDLYNNN 232 (258)
Q Consensus 198 ~L~~L~l~~n~~~~~~~~~---~~~~~~L~~L~l~~~~ 232 (258)
.|+++.++.|... +|.. +...|+|.+|++.||-
T Consensus 339 ~L~~lSlsRCY~i--~p~~~~~l~s~psl~yLdv~g~v 374 (419)
T KOG2120|consen 339 YLQHLSLSRCYDI--IPETLLELNSKPSLVYLDVFGCV 374 (419)
T ss_pred hheeeehhhhcCC--ChHHeeeeccCcceEEEEecccc
Confidence 8999999988753 3433 4567889999988873
No 47
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.56 E-value=2.6e-08 Score=89.54 Aligned_cols=104 Identities=19% Similarity=0.168 Sum_probs=54.6
Q ss_pred CCCCceEEecCCc--ccccccccccCCCCCcEEEeecccCC-CCCCCccccCCcceEEeccccccCcCCCccchhhhccc
Q 048125 21 LPNLEGLNLAGNQ--FTGPIPVSISNASNLRELMIGKNGFS-GKVPSLENLHKLQRVIISQNHLGNYGEKDNLEFVNSLV 97 (258)
Q Consensus 21 ~~~L~~L~l~~~~--~~~~~~~~~~~~~~L~~L~l~~~~~~-~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~ 97 (258)
+++|++|-+..+. +.......|..++.|+.|++++|.-. ..+..++.+-+||.|+++++.++ .++..+.
T Consensus 544 ~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~--------~LP~~l~ 615 (889)
T KOG4658|consen 544 NPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS--------HLPSGLG 615 (889)
T ss_pred CCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc--------ccchHHH
Confidence 5556666666553 33223333555666666666654433 23333566666666666666555 3445555
Q ss_pred cCCCCcEEEeecccccccccccccccccccceEEec
Q 048125 98 NASRLELLQISDNNFGGMLPEAVGNFSTRLGILSVA 133 (258)
Q Consensus 98 ~~~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~l~ 133 (258)
.+.+|.+|++..+.....++.....+ .+|++|.+.
T Consensus 616 ~Lk~L~~Lnl~~~~~l~~~~~i~~~L-~~Lr~L~l~ 650 (889)
T KOG4658|consen 616 NLKKLIYLNLEVTGRLESIPGILLEL-QSLRVLRLP 650 (889)
T ss_pred HHHhhheeccccccccccccchhhhc-ccccEEEee
Confidence 66666666666554432333322323 356666554
No 48
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.53 E-value=1e-09 Score=93.50 Aligned_cols=153 Identities=25% Similarity=0.269 Sum_probs=109.8
Q ss_pred hhccccCCCCcEEEeecccccccccccccccccccceEEecc-----------cccCCccCccCCCCCcccEEEeeCCcc
Q 048125 93 VNSLVNASRLELLQISDNNFGGMLPEAVGNFSTRLGILSVAE-----------NQLFGNIPSGLRNLVNLELLDLSGNQF 161 (258)
Q Consensus 93 ~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~l~~-----------~~~~~~~~~~~~~~~~L~~L~l~~~~~ 161 (258)
+..+..+.+|++|.+.++++.. ...+......|++|.... |.. .+..+ ..+-.|.+.+++.|.+
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~--~~GL~~lr~qLe~LIC~~Sl~Al~~v~ascgg--d~~ns-~~Wn~L~~a~fsyN~L 176 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLST--AKGLQELRHQLEKLICHNSLDALRHVFASCGG--DISNS-PVWNKLATASFSYNRL 176 (1096)
T ss_pred CceeccccceeeEEecCcchhh--hhhhHHHHHhhhhhhhhccHHHHHHHHHHhcc--ccccc-hhhhhHhhhhcchhhH
Confidence 4467778899999999998862 223333334555553322 111 11111 1234788889999988
Q ss_pred ccccCCcccCccCCcEEEecCCccccccCCCCCCCCCcceEecccccccccCCcccccCcCCcEEeccCCcccccccccc
Q 048125 162 TSRIPGSIGDLQKLQMLGLNGNKFLGEIPSSIGNLTLLMTLNFAENMLEGSIPSSLGKCQNLIVLDLYNNNLSGTIPSEV 241 (258)
Q Consensus 162 ~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~~~ 241 (258)
. .....++-++.++.|+++.|+++++ +.+.++++|++||+++|.+....-....+|. |..|.++||.+++ ..++
T Consensus 177 ~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lrnN~l~t--L~gi 250 (1096)
T KOG1859|consen 177 V-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLRNNALTT--LRGI 250 (1096)
T ss_pred H-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhccccccchhhhh-heeeeecccHHHh--hhhH
Confidence 7 5566778889999999999999854 3789999999999999999843333445555 9999999999883 3457
Q ss_pred ccccCcceeEecCCCC
Q 048125 242 IGLSSLSIYLDLSQNQ 257 (258)
Q Consensus 242 ~~~~~l~~~L~l~~n~ 257 (258)
..+.+| ..||+++|-
T Consensus 251 e~LksL-~~LDlsyNl 265 (1096)
T KOG1859|consen 251 ENLKSL-YGLDLSYNL 265 (1096)
T ss_pred Hhhhhh-hccchhHhh
Confidence 788999 999999984
No 49
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.45 E-value=1.2e-08 Score=77.46 Aligned_cols=44 Identities=23% Similarity=0.331 Sum_probs=19.4
Q ss_pred cccCCcceEEeccccccCcCCCccchhhhccccCCCCcEEEeecccc
Q 048125 66 ENLHKLQRVIISQNHLGNYGEKDNLEFVNSLVNASRLELLQISDNNF 112 (258)
Q Consensus 66 ~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~ 112 (258)
-++|.|+.+++++|.+.+.... .+.+-+++.+.|.+|.+++|.+
T Consensus 89 lkcp~l~~v~LSDNAfg~~~~e---~L~d~is~~t~l~HL~l~NnGl 132 (388)
T COG5238 89 LKCPRLQKVDLSDNAFGSEFPE---ELGDLISSSTDLVHLKLNNNGL 132 (388)
T ss_pred hcCCcceeeeccccccCcccch---HHHHHHhcCCCceeEEeecCCC
Confidence 3445555555555544432222 2223344444455555555443
No 50
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.26 E-value=9.3e-08 Score=72.72 Aligned_cols=228 Identities=20% Similarity=0.234 Sum_probs=147.3
Q ss_pred CCCCcCcccCCCCcchhc---cCCCCceEEecCCccccc-----------ccccccCCCCCcEEEeecccCCCCCCC---
Q 048125 2 FDFPFNQLQGSLPSDLGF---TLPNLEGLNLAGNQFTGP-----------IPVSISNASNLRELMIGKNGFSGKVPS--- 64 (258)
Q Consensus 2 l~~~~~~~~~~~~~~~~~---~~~~L~~L~l~~~~~~~~-----------~~~~~~~~~~L~~L~l~~~~~~~~~~~--- 64 (258)
+++++|-+..+..+.+.. +-.+|+..+++.- +++. +.+.+.+|++|+..++++|.+....++
T Consensus 35 vdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~-ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAfg~~~~e~L~ 113 (388)
T COG5238 35 VDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDA-FTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAFGSEFPEELG 113 (388)
T ss_pred EeccCCcccHHHHHHHHHHHhhhcceeEeehhhh-hhcccHHHHHHHHHHHHHHHhcCCcceeeeccccccCcccchHHH
Confidence 345555555343333222 2445666666543 2211 234467899999999999998654443
Q ss_pred --ccccCCcceEEeccccccCcCCCccchhh---------hccccCCCCcEEEeeccccccccccc----ccccccccce
Q 048125 65 --LENLHKLQRVIISQNHLGNYGEKDNLEFV---------NSLVNASRLELLQISDNNFGGMLPEA----VGNFSTRLGI 129 (258)
Q Consensus 65 --~~~l~~L~~L~l~~~~~~~~~~~~~~~~~---------~~~~~~~~L~~L~l~~~~~~~~~~~~----~~~~~~~l~~ 129 (258)
+++...|.+|.+.+|.+.+.+.. ++. .....-|.|+++....|++. ..+.. .......++.
T Consensus 114 d~is~~t~l~HL~l~NnGlGp~aG~---rigkal~~la~nKKaa~kp~Le~vicgrNRle-ngs~~~~a~~l~sh~~lk~ 189 (388)
T COG5238 114 DLISSSTDLVHLKLNNNGLGPIAGG---RIGKALFHLAYNKKAADKPKLEVVICGRNRLE-NGSKELSAALLESHENLKE 189 (388)
T ss_pred HHHhcCCCceeEEeecCCCCccchh---HHHHHHHHHHHHhhhccCCCceEEEeccchhc-cCcHHHHHHHHHhhcCcee
Confidence 57778999999999998776543 333 34456788999999888775 32221 1122236788
Q ss_pred EEecccccCCcc-----CccCCCCCcccEEEeeCCcccc----ccCCcccCccCCcEEEecCCccccccC----CCC--C
Q 048125 130 LSVAENQLFGNI-----PSGLRNLVNLELLDLSGNQFTS----RIPGSIGDLQKLQMLGLNGNKFLGEIP----SSI--G 194 (258)
Q Consensus 130 L~l~~~~~~~~~-----~~~~~~~~~L~~L~l~~~~~~~----~~~~~~~~~~~L~~L~l~~~~~~~~~~----~~~--~ 194 (258)
+.+..|.+.... -..+.++++|+.|++..|.++. ....++..++.|+.|.+.+|-+...-. ..| .
T Consensus 190 vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrEL~lnDClls~~G~~~v~~~f~e~ 269 (388)
T COG5238 190 VKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRELRLNDCLLSNEGVKSVLRRFNEK 269 (388)
T ss_pred EEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhhccccchhhccccHHHHHHHhhhh
Confidence 888888776431 1234577899999999998863 234455677889999999987653222 122 3
Q ss_pred CCCCcceEecccccccccCCcc-----c--ccCcCCcEEeccCCccc
Q 048125 195 NLTLLMTLNFAENMLEGSIPSS-----L--GKCQNLIVLDLYNNNLS 234 (258)
Q Consensus 195 ~~~~L~~L~l~~n~~~~~~~~~-----~--~~~~~L~~L~l~~~~l~ 234 (258)
..|+|+.|...+|.+.+..-.. + .++|-|..+.+.||+++
T Consensus 270 ~~p~l~~L~~~Yne~~~~~i~~~~l~~~e~~~~p~L~~le~ngNr~~ 316 (388)
T COG5238 270 FVPNLMPLPGDYNERRGGIILDISLNEFEQDAVPLLVDLERNGNRIK 316 (388)
T ss_pred cCCCccccccchhhhcCceeeeechhhhhhcccHHHHHHHHccCcch
Confidence 4688888888888764321111 1 34777888888888887
No 51
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=98.25 E-value=2.6e-06 Score=62.12 Aligned_cols=128 Identities=21% Similarity=0.149 Sum_probs=87.3
Q ss_pred cEEEeecccccccccccccccccccceEEecccccCCccCccCCCCCcccEEEeeCCccccccCCcccCccCCcEEEecC
Q 048125 103 ELLQISDNNFGGMLPEAVGNFSTRLGILSVAENQLFGNIPSGLRNLVNLELLDLSGNQFTSRIPGSIGDLQKLQMLGLNG 182 (258)
Q Consensus 103 ~~L~l~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~ 182 (258)
+.+++.+..+... ..++....+...+++.+|.+. ....|..+++|.+|.+.+|.|+.+.|..-..+++|..|.+.+
T Consensus 22 ~e~~LR~lkip~i--enlg~~~d~~d~iDLtdNdl~--~l~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~Ltn 97 (233)
T KOG1644|consen 22 RELDLRGLKIPVI--ENLGATLDQFDAIDLTDNDLR--KLDNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTN 97 (233)
T ss_pred cccccccccccch--hhccccccccceecccccchh--hcccCCCccccceEEecCCcceeeccchhhhccccceEEecC
Confidence 4455555544311 113333346777888888664 234567788999999999999877776656678899999999
Q ss_pred Ccccccc-CCCCCCCCCcceEeccccccccc---CCcccccCcCCcEEeccCCccc
Q 048125 183 NKFLGEI-PSSIGNLTLLMTLNFAENMLEGS---IPSSLGKCQNLIVLDLYNNNLS 234 (258)
Q Consensus 183 ~~~~~~~-~~~~~~~~~L~~L~l~~n~~~~~---~~~~~~~~~~L~~L~l~~~~l~ 234 (258)
|.+.+.. -+-+..||+|+.|.+-+|++... -...+..+|+|+.||+++-+..
T Consensus 98 Nsi~~l~dl~pLa~~p~L~~Ltll~Npv~~k~~YR~yvl~klp~l~~LDF~kVt~~ 153 (233)
T KOG1644|consen 98 NSIQELGDLDPLASCPKLEYLTLLGNPVEHKKNYRLYVLYKLPSLRTLDFQKVTRK 153 (233)
T ss_pred cchhhhhhcchhccCCccceeeecCCchhcccCceeEEEEecCcceEeehhhhhHH
Confidence 8886421 23467788999999999988632 2234677899999998876544
No 52
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=98.19 E-value=3.4e-06 Score=61.56 Aligned_cols=107 Identities=20% Similarity=0.247 Sum_probs=72.2
Q ss_pred CCcceEEeccccccCcCCCccchhhhccccCCCCcEEEeecccccccccccccccccccceEEecccccCCcc-CccCCC
Q 048125 69 HKLQRVIISQNHLGNYGEKDNLEFVNSLVNASRLELLQISDNNFGGMLPEAVGNFSTRLGILSVAENQLFGNI-PSGLRN 147 (258)
Q Consensus 69 ~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~~~-~~~~~~ 147 (258)
.+...+++++|.+.. ...+.+++.|.+|.++.|+++ .+.+.+..+.+.+..|.+.+|.+.+.. -.-+..
T Consensus 42 d~~d~iDLtdNdl~~---------l~~lp~l~rL~tLll~nNrIt-~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~ 111 (233)
T KOG1644|consen 42 DQFDAIDLTDNDLRK---------LDNLPHLPRLHTLLLNNNRIT-RIDPDLDTFLPNLKTLILTNNSIQELGDLDPLAS 111 (233)
T ss_pred cccceecccccchhh---------cccCCCccccceEEecCCcce-eeccchhhhccccceEEecCcchhhhhhcchhcc
Confidence 355666777776643 235667778888888888887 555556666667888888888765321 233456
Q ss_pred CCcccEEEeeCCccccc---cCCcccCccCCcEEEecCCcc
Q 048125 148 LVNLELLDLSGNQFTSR---IPGSIGDLQKLQMLGLNGNKF 185 (258)
Q Consensus 148 ~~~L~~L~l~~~~~~~~---~~~~~~~~~~L~~L~l~~~~~ 185 (258)
+++|++|.+-+|++... -...+..+++|+.|++++-..
T Consensus 112 ~p~L~~Ltll~Npv~~k~~YR~yvl~klp~l~~LDF~kVt~ 152 (233)
T KOG1644|consen 112 CPKLEYLTLLGNPVEHKKNYRLYVLYKLPSLRTLDFQKVTR 152 (233)
T ss_pred CCccceeeecCCchhcccCceeEEEEecCcceEeehhhhhH
Confidence 77888888888887632 234556788888888876543
No 53
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.15 E-value=2e-06 Score=47.37 Aligned_cols=36 Identities=33% Similarity=0.507 Sum_probs=20.9
Q ss_pred CcceEecccccccccCCcccccCcCCcEEeccCCccc
Q 048125 198 LLMTLNFAENMLEGSIPSSLGKCQNLIVLDLYNNNLS 234 (258)
Q Consensus 198 ~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~~~l~ 234 (258)
+|++|++++|+++ .+|..++.+++|+.|++++|+|+
T Consensus 2 ~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 4566666666666 34444566666666666666665
No 54
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.13 E-value=8.2e-08 Score=65.55 Aligned_cols=108 Identities=25% Similarity=0.348 Sum_probs=75.2
Q ss_pred cceEEecccccCCccCcc---CCCCCcccEEEeeCCccccccCCcc-cCccCCcEEEecCCccccccCCCCCCCCCcceE
Q 048125 127 LGILSVAENQLFGNIPSG---LRNLVNLELLDLSGNQFTSRIPGSI-GDLQKLQMLGLNGNKFLGEIPSSIGNLTLLMTL 202 (258)
Q Consensus 127 l~~L~l~~~~~~~~~~~~---~~~~~~L~~L~l~~~~~~~~~~~~~-~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L 202 (258)
+..+++++|.+. .+++. +.....|+..++++|.+. ..|..| ...+.++.+++.+|.+. .+|+.+..++.|+.+
T Consensus 29 ~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~l 105 (177)
T KOG4579|consen 29 LHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSL 105 (177)
T ss_pred hhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhc
Confidence 445666677654 22222 234456777788888887 444444 34567888888888887 677778888888888
Q ss_pred ecccccccccCCcccccCcCCcEEeccCCcccccccc
Q 048125 203 NFAENMLEGSIPSSLGKCQNLIVLDLYNNNLSGTIPS 239 (258)
Q Consensus 203 ~l~~n~~~~~~~~~~~~~~~L~~L~l~~~~l~~~~~~ 239 (258)
+++.|.+. ..|+.+..+.++..|+..+|.+. .++.
T Consensus 106 Nl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~ 140 (177)
T KOG4579|consen 106 NLRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDV 140 (177)
T ss_pred ccccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcH
Confidence 88888887 67777777888888888888776 4443
No 55
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.09 E-value=1.1e-07 Score=65.00 Aligned_cols=84 Identities=27% Similarity=0.334 Sum_probs=42.4
Q ss_pred CCCcEEEeecccccccccccccccccccceEEecccccCCccCccCCCCCcccEEEeeCCccccccCCcccCccCCcEEE
Q 048125 100 SRLELLQISDNNFGGMLPEAVGNFSTRLGILSVAENQLFGNIPSGLRNLVNLELLDLSGNQFTSRIPGSIGDLQKLQMLG 179 (258)
Q Consensus 100 ~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~ 179 (258)
..|+..++++|.+. .+|+.+....+..+.++++.|++. .+|+.+..++.|+.++++.|++. ..|..+..+.++..|+
T Consensus 53 ~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Ld 129 (177)
T KOG4579|consen 53 YELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLD 129 (177)
T ss_pred ceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhc
Confidence 33444455555444 333333333334555555555554 34444555555666666665555 3444444455555555
Q ss_pred ecCCccc
Q 048125 180 LNGNKFL 186 (258)
Q Consensus 180 l~~~~~~ 186 (258)
..++...
T Consensus 130 s~~na~~ 136 (177)
T KOG4579|consen 130 SPENARA 136 (177)
T ss_pred CCCCccc
Confidence 5555543
No 56
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.04 E-value=4.7e-06 Score=45.85 Aligned_cols=36 Identities=42% Similarity=0.622 Sum_probs=31.1
Q ss_pred cCCcEEeccCCccccccccccccccCcceeEecCCCCC
Q 048125 221 QNLIVLDLYNNNLSGTIPSEVIGLSSLSIYLDLSQNQL 258 (258)
Q Consensus 221 ~~L~~L~l~~~~l~~~~~~~~~~~~~l~~~L~l~~n~~ 258 (258)
++|++|++++|+|+ .++..+..++.| ++|++++|++
T Consensus 1 ~~L~~L~l~~N~i~-~l~~~l~~l~~L-~~L~l~~N~i 36 (44)
T PF12799_consen 1 KNLEELDLSNNQIT-DLPPELSNLPNL-ETLNLSNNPI 36 (44)
T ss_dssp TT-SEEEETSSS-S-SHGGHGTTCTTS-SEEEETSSCC
T ss_pred CcceEEEccCCCCc-ccCchHhCCCCC-CEEEecCCCC
Confidence 47899999999999 678789999999 9999999986
No 57
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=98.01 E-value=9.5e-07 Score=77.76 Aligned_cols=135 Identities=21% Similarity=0.267 Sum_probs=87.9
Q ss_pred CCCcEEEeecccc-cccccccccccccccceEEecccccC-CccCccCCCCCcccEEEeeCCccccccCCcccCccCCcE
Q 048125 100 SRLELLQISDNNF-GGMLPEAVGNFSTRLGILSVAENQLF-GNIPSGLRNLVNLELLDLSGNQFTSRIPGSIGDLQKLQM 177 (258)
Q Consensus 100 ~~L~~L~l~~~~~-~~~~~~~~~~~~~~l~~L~l~~~~~~-~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~ 177 (258)
.+|++|++++... ....+..++...|+|+.|.+.+-... +.......++++|..||+++.++... ...+.+++|+.
T Consensus 122 ~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~LknLq~ 199 (699)
T KOG3665|consen 122 QNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRLKNLQV 199 (699)
T ss_pred HhhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhccccHHH
Confidence 4688888887532 33445566777788888888775442 22334455778888888888888733 45677888888
Q ss_pred EEecCCcccc-ccCCCCCCCCCcceEecccccccccC------CcccccCcCCcEEeccCCccccc
Q 048125 178 LGLNGNKFLG-EIPSSIGNLTLLMTLNFAENMLEGSI------PSSLGKCQNLIVLDLYNNNLSGT 236 (258)
Q Consensus 178 L~l~~~~~~~-~~~~~~~~~~~L~~L~l~~n~~~~~~------~~~~~~~~~L~~L~l~~~~l~~~ 236 (258)
|.+.+-.+.. ..-..+.++++|+.||++........ .+.-..+|+|+.||.+++.+...
T Consensus 200 L~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~~~ 265 (699)
T KOG3665|consen 200 LSMRNLEFESYQDLIDLFNLKKLRVLDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDINEE 265 (699)
T ss_pred HhccCCCCCchhhHHHHhcccCCCeeeccccccccchHHHHHHHHhcccCccccEEecCCcchhHH
Confidence 8777655542 11123566888888888876643211 11223378888888888888743
No 58
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=97.90 E-value=8.8e-05 Score=51.41 Aligned_cols=100 Identities=16% Similarity=0.225 Sum_probs=40.1
Q ss_pred ccceEEecccccCCccCccCCCCCcccEEEeeCCccccccCCcccCccCCcEEEecCCccccccCCCCCCCCCcceEecc
Q 048125 126 RLGILSVAENQLFGNIPSGLRNLVNLELLDLSGNQFTSRIPGSIGDLQKLQMLGLNGNKFLGEIPSSIGNLTLLMTLNFA 205 (258)
Q Consensus 126 ~l~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~ 205 (258)
+++.+.+.. .+.......|..+++++++.+..+ +......+|.++++++.+.+.+ .+.......|..+++++.+++.
T Consensus 13 ~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~~l~~i~~~ 89 (129)
T PF13306_consen 13 NLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCTNLKNIDIP 89 (129)
T ss_dssp T--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-TTECEEEET
T ss_pred CCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-cccccccccccccccccccccC
Confidence 455555543 222222334445555666665553 4334445555555566666644 3332333455556666666665
Q ss_pred cccccccCCcccccCcCCcEEeccC
Q 048125 206 ENMLEGSIPSSLGKCQNLIVLDLYN 230 (258)
Q Consensus 206 ~n~~~~~~~~~~~~~~~L~~L~l~~ 230 (258)
.+ +.......+..+ .++.+.+..
T Consensus 90 ~~-~~~i~~~~f~~~-~l~~i~~~~ 112 (129)
T PF13306_consen 90 SN-ITEIGSSSFSNC-NLKEINIPS 112 (129)
T ss_dssp TT--BEEHTTTTTT--T--EEE-TT
T ss_pred cc-ccEEchhhhcCC-CceEEEECC
Confidence 44 332333444444 666665554
No 59
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.89 E-value=7.2e-05 Score=61.47 Aligned_cols=137 Identities=20% Similarity=0.212 Sum_probs=72.6
Q ss_pred cccCCcceEEeccccccCcCCCccchhhhccccCCCCcEEEeecccccccccccccccccccceEEecccccCCccCccC
Q 048125 66 ENLHKLQRVIISQNHLGNYGEKDNLEFVNSLVNASRLELLQISDNNFGGMLPEAVGNFSTRLGILSVAENQLFGNIPSGL 145 (258)
Q Consensus 66 ~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~~~~~~~ 145 (258)
..+.+++.|++++|.++.. + .-.++|+.|.+++|.-...+|..+ +.+|+.|.+++|.....+|
T Consensus 49 ~~~~~l~~L~Is~c~L~sL--------P---~LP~sLtsL~Lsnc~nLtsLP~~L---P~nLe~L~Ls~Cs~L~sLP--- 111 (426)
T PRK15386 49 EEARASGRLYIKDCDIESL--------P---VLPNELTEITIENCNNLTTLPGSI---PEGLEKLTVCHCPEISGLP--- 111 (426)
T ss_pred HHhcCCCEEEeCCCCCccc--------C---CCCCCCcEEEccCCCCcccCCchh---hhhhhheEccCcccccccc---
Confidence 4467889999998877643 2 112368899998864433555433 3578899988873221233
Q ss_pred CCCCcccEEEeeCCccccccCCcccCccCCcEEEecCCccc--cccCCCCCCCCCcceEecccccccccCCcccccCcCC
Q 048125 146 RNLVNLELLDLSGNQFTSRIPGSIGDLQKLQMLGLNGNKFL--GEIPSSIGNLTLLMTLNFAENMLEGSIPSSLGKCQNL 223 (258)
Q Consensus 146 ~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~--~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L 223 (258)
+.|++|++..+.... ... -.++|+.|.+.++... ...+.. -.++|++|++++|... ..|..+. .+|
T Consensus 112 ---~sLe~L~L~~n~~~~-L~~---LPssLk~L~I~~~n~~~~~~lp~~--LPsSLk~L~Is~c~~i-~LP~~LP--~SL 179 (426)
T PRK15386 112 ---ESVRSLEIKGSATDS-IKN---VPNGLTSLSINSYNPENQARIDNL--ISPSLKTLSLTGCSNI-ILPEKLP--ESL 179 (426)
T ss_pred ---cccceEEeCCCCCcc-ccc---CcchHhheeccccccccccccccc--cCCcccEEEecCCCcc-cCccccc--ccC
Confidence 356667766543321 111 0124555555432211 011111 1256777777776654 2333222 466
Q ss_pred cEEeccCC
Q 048125 224 IVLDLYNN 231 (258)
Q Consensus 224 ~~L~l~~~ 231 (258)
+.|+++.+
T Consensus 180 k~L~ls~n 187 (426)
T PRK15386 180 QSITLHIE 187 (426)
T ss_pred cEEEeccc
Confidence 66666654
No 60
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=97.81 E-value=0.00016 Score=50.13 Aligned_cols=121 Identities=18% Similarity=0.207 Sum_probs=46.1
Q ss_pred cccCCCCcEEEeecccccccccccccccccccceEEecccccCCccCccCCCCCcccEEEeeCCccccccCCcccCccCC
Q 048125 96 LVNASRLELLQISDNNFGGMLPEAVGNFSTRLGILSVAENQLFGNIPSGLRNLVNLELLDLSGNQFTSRIPGSIGDLQKL 175 (258)
Q Consensus 96 ~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L 175 (258)
+..+.+|+.+.+.. .+. .+....+..+..++.+.+..+ +.......|..++.++++.+.. .+.......|..++++
T Consensus 8 F~~~~~l~~i~~~~-~~~-~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~~l 83 (129)
T PF13306_consen 8 FYNCSNLESITFPN-TIK-KIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCTNL 83 (129)
T ss_dssp TTT-TT--EEEETS-T---EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-TTE
T ss_pred HhCCCCCCEEEECC-Cee-EeChhhccccccccccccccc-ccccceeeeecccccccccccc-cccccccccccccccc
Confidence 44455555555543 222 233333333345666665543 3323334455555666666654 3332444566666666
Q ss_pred cEEEecCCccccccCCCCCCCCCcceEecccccccccCCcccccCcCC
Q 048125 176 QMLGLNGNKFLGEIPSSIGNLTLLMTLNFAENMLEGSIPSSLGKCQNL 223 (258)
Q Consensus 176 ~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L 223 (258)
+.+.+..+ +...-...|..+ +++.+.+.+ .+.......+.+|++|
T Consensus 84 ~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~~-~~~~i~~~~F~~~~~l 128 (129)
T PF13306_consen 84 KNIDIPSN-ITEIGSSSFSNC-NLKEINIPS-NITKIEENAFKNCTKL 128 (129)
T ss_dssp CEEEETTT--BEEHTTTTTT--T--EEE-TT-B-SS----GGG-----
T ss_pred cccccCcc-ccEEchhhhcCC-CceEEEECC-CccEECCccccccccC
Confidence 66666543 443444456665 666666655 2222344445555444
No 61
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=97.76 E-value=8.5e-07 Score=71.33 Aligned_cols=47 Identities=19% Similarity=0.037 Sum_probs=31.3
Q ss_pred CCCcchhccCCCCceEEecCC-cccccccccc-cCCCCCcEEEeecccC
Q 048125 12 SLPSDLGFTLPNLEGLNLAGN-QFTGPIPVSI-SNASNLRELMIGKNGF 58 (258)
Q Consensus 12 ~~~~~~~~~~~~L~~L~l~~~-~~~~~~~~~~-~~~~~L~~L~l~~~~~ 58 (258)
..-..+...|++|+++++..| .++....+.+ .++++|++|++++|.-
T Consensus 180 ~s~~sla~~C~~l~~l~L~~c~~iT~~~Lk~la~gC~kL~~lNlSwc~q 228 (483)
T KOG4341|consen 180 SSLLSLARYCRKLRHLNLHSCSSITDVSLKYLAEGCRKLKYLNLSWCPQ 228 (483)
T ss_pred HHHHHHHHhcchhhhhhhcccchhHHHHHHHHHHhhhhHHHhhhccCch
Confidence 333345556888888888886 5554443333 3688888888888764
No 62
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=97.75 E-value=7.2e-07 Score=71.74 Aligned_cols=67 Identities=22% Similarity=0.198 Sum_probs=48.8
Q ss_pred CcchhccCCCCceEEecCC-ccccccccccc-CCCCCcEEEeecccCCC-CCCC--ccccCCcceEEecccc
Q 048125 14 PSDLGFTLPNLEGLNLAGN-QFTGPIPVSIS-NASNLRELMIGKNGFSG-KVPS--LENLHKLQRVIISQNH 80 (258)
Q Consensus 14 ~~~~~~~~~~L~~L~l~~~-~~~~~~~~~~~-~~~~L~~L~l~~~~~~~-~~~~--~~~l~~L~~L~l~~~~ 80 (258)
.+.+..+||++++|++.+| ++++....+++ .|++|++|++..|.... .... ..++++|+++++++|.
T Consensus 156 lrt~~~~CpnIehL~l~gc~~iTd~s~~sla~~C~~l~~l~L~~c~~iT~~~Lk~la~gC~kL~~lNlSwc~ 227 (483)
T KOG4341|consen 156 LRTFASNCPNIEHLALYGCKKITDSSLLSLARYCRKLRHLNLHSCSSITDVSLKYLAEGCRKLKYLNLSWCP 227 (483)
T ss_pred hhHHhhhCCchhhhhhhcceeccHHHHHHHHHhcchhhhhhhcccchhHHHHHHHHHHhhhhHHHhhhccCc
Confidence 3456667999999999999 56554444444 58999999999965432 2222 4688999999999874
No 63
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.75 E-value=0.00033 Score=57.70 Aligned_cols=53 Identities=13% Similarity=0.261 Sum_probs=25.1
Q ss_pred CCCCceEEecCCcccccccccccCCCCCcEEEeecccCCCCCCC-ccccCCcceEEeccc
Q 048125 21 LPNLEGLNLAGNQFTGPIPVSISNASNLRELMIGKNGFSGKVPS-LENLHKLQRVIISQN 79 (258)
Q Consensus 21 ~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~-~~~l~~L~~L~l~~~ 79 (258)
|.++++|++.+|.++ .+| .+ -.+|++|.+++|.-....+. + ..+|+.|.+.+|
T Consensus 51 ~~~l~~L~Is~c~L~-sLP-~L--P~sLtsL~Lsnc~nLtsLP~~L--P~nLe~L~Ls~C 104 (426)
T PRK15386 51 ARASGRLYIKDCDIE-SLP-VL--PNELTEITIENCNNLTTLPGSI--PEGLEKLTVCHC 104 (426)
T ss_pred hcCCCEEEeCCCCCc-ccC-CC--CCCCcEEEccCCCCcccCCchh--hhhhhheEccCc
Confidence 456666666666554 233 11 12466666655443222221 1 135556655554
No 64
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.71 E-value=1.9e-05 Score=69.71 Aligned_cols=90 Identities=27% Similarity=0.409 Sum_probs=52.4
Q ss_pred chhccCCCCceEEecCCcccc-cccccccCCCCCcEEEeecccCCCCCCCccccCCcceEEeccccccCcCCCccchhhh
Q 048125 16 DLGFTLPNLEGLNLAGNQFTG-PIPVSISNASNLRELMIGKNGFSGKVPSLENLHKLQRVIISQNHLGNYGEKDNLEFVN 94 (258)
Q Consensus 16 ~~~~~~~~L~~L~l~~~~~~~-~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~ 94 (258)
.++.-+|.|++|.+++-.+.. .+..-..++++|..||++++++... ..++.+.+|+.|.+.+=.+... ....
T Consensus 142 kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl-~GIS~LknLq~L~mrnLe~e~~------~~l~ 214 (699)
T KOG3665|consen 142 KIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL-SGISRLKNLQVLSMRNLEFESY------QDLI 214 (699)
T ss_pred HHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc-HHHhccccHHHHhccCCCCCch------hhHH
Confidence 355557777777776654432 2223334567777777777766543 2356666777776665555442 2233
Q ss_pred ccccCCCCcEEEeecccc
Q 048125 95 SLVNASRLELLQISDNNF 112 (258)
Q Consensus 95 ~~~~~~~L~~L~l~~~~~ 112 (258)
.+..+.+|++||+|....
T Consensus 215 ~LF~L~~L~vLDIS~~~~ 232 (699)
T KOG3665|consen 215 DLFNLKKLRVLDISRDKN 232 (699)
T ss_pred HHhcccCCCeeecccccc
Confidence 555677777777776543
No 65
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=97.55 E-value=3.2e-06 Score=72.20 Aligned_cols=112 Identities=20% Similarity=0.190 Sum_probs=53.4
Q ss_pred cCCCCceEEecCC-ccccc-ccccccCCCCCcEEEeecc-cCCCCCC-----CccccCCcceEEecccc-ccCcCCCccc
Q 048125 20 TLPNLEGLNLAGN-QFTGP-IPVSISNASNLRELMIGKN-GFSGKVP-----SLENLHKLQRVIISQNH-LGNYGEKDNL 90 (258)
Q Consensus 20 ~~~~L~~L~l~~~-~~~~~-~~~~~~~~~~L~~L~l~~~-~~~~~~~-----~~~~l~~L~~L~l~~~~-~~~~~~~~~~ 90 (258)
.+++|+.+.+..| .++.. .......++.|+.|+++++ ....... ....+.+|++++++++. +++.+
T Consensus 186 ~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~isd~~----- 260 (482)
T KOG1947|consen 186 SCPLLKRLSLSGCSKITDDSLDALALKCPNLEELDLSGCCLLITLSPLLLLLLLSICRKLKSLDLSGCGLVTDIG----- 260 (482)
T ss_pred hCchhhHhhhcccccCChhhHHHHHhhCchhheecccCcccccccchhHhhhhhhhcCCcCccchhhhhccCchh-----
Confidence 3566666666655 33321 1223345666777776652 1111111 12344666666666665 33311
Q ss_pred hhhhccccCCCCcEEEeeccc-ccccccccccccccccceEEeccccc
Q 048125 91 EFVNSLVNASRLELLQISDNN-FGGMLPEAVGNFSTRLGILSVAENQL 137 (258)
Q Consensus 91 ~~~~~~~~~~~L~~L~l~~~~-~~~~~~~~~~~~~~~l~~L~l~~~~~ 137 (258)
+......++.|+.|.+..+. +++.....+...++.|+.|+++.|..
T Consensus 261 -l~~l~~~c~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~~ 307 (482)
T KOG1947|consen 261 -LSALASRCPNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCHG 307 (482)
T ss_pred -HHHHHhhCCCcceEccCCCCccchhHHHHHHHhcCcccEEeeecCcc
Confidence 11111225666666655554 34333333333344566666665543
No 66
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=97.18 E-value=0.00021 Score=54.38 Aligned_cols=100 Identities=31% Similarity=0.370 Sum_probs=64.9
Q ss_pred CcccEEEeeCCccccccCCcccCccCCcEEEecCC--ccccccCCCCCCCCCcceEecccccccccCCcc---cccCcCC
Q 048125 149 VNLELLDLSGNQFTSRIPGSIGDLQKLQMLGLNGN--KFLGEIPSSIGNLTLLMTLNFAENMLEGSIPSS---LGKCQNL 223 (258)
Q Consensus 149 ~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~--~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~---~~~~~~L 223 (258)
..++.+.+.+..++. -..|..+++|++|.+++| .+...++-....+|+|+++++++|++.. +.. +..+.+|
T Consensus 43 ~~le~ls~~n~gltt--~~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~--lstl~pl~~l~nL 118 (260)
T KOG2739|consen 43 VELELLSVINVGLTT--LTNFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKD--LSTLRPLKELENL 118 (260)
T ss_pred cchhhhhhhccceee--cccCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCcccc--ccccchhhhhcch
Confidence 455566666655552 234566788999999998 5554444444566999999999998862 322 3456778
Q ss_pred cEEeccCCcccccc---ccccccccCcceeEec
Q 048125 224 IVLDLYNNNLSGTI---PSEVIGLSSLSIYLDL 253 (258)
Q Consensus 224 ~~L~l~~~~l~~~~---~~~~~~~~~l~~~L~l 253 (258)
..|++.+|..+..- ...|..+++| .+||-
T Consensus 119 ~~Ldl~n~~~~~l~dyre~vf~ll~~L-~~LD~ 150 (260)
T KOG2739|consen 119 KSLDLFNCSVTNLDDYREKVFLLLPSL-KYLDG 150 (260)
T ss_pred hhhhcccCCccccccHHHHHHHHhhhh-ccccc
Confidence 88888888776311 1345566677 66663
No 67
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=97.07 E-value=0.00024 Score=54.11 Aligned_cols=105 Identities=17% Similarity=0.145 Sum_probs=52.5
Q ss_pred CCCCceEEecCCcccccccccccCCCCCcEEEeecccCCCC--CCC-ccccCCcceEEeccccccCcCCCccchhhhccc
Q 048125 21 LPNLEGLNLAGNQFTGPIPVSISNASNLRELMIGKNGFSGK--VPS-LENLHKLQRVIISQNHLGNYGEKDNLEFVNSLV 97 (258)
Q Consensus 21 ~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~--~~~-~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~ 97 (258)
+.+|+.+++.++..+. ...|..+++|+.|.++.|..... ... ...+++|+++++++|++... .....+.
T Consensus 42 ~~~le~ls~~n~gltt--~~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~l------stl~pl~ 113 (260)
T KOG2739|consen 42 FVELELLSVINVGLTT--LTNFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKDL------STLRPLK 113 (260)
T ss_pred ccchhhhhhhccceee--cccCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccccc------cccchhh
Confidence 5555666555555442 12344556666777766633221 111 33446777777777766542 2333445
Q ss_pred cCCCCcEEEeecccccc--cccccccccccccceEEec
Q 048125 98 NASRLELLQISDNNFGG--MLPEAVGNFSTRLGILSVA 133 (258)
Q Consensus 98 ~~~~L~~L~l~~~~~~~--~~~~~~~~~~~~l~~L~l~ 133 (258)
.+.+|..|++..|..+. ..-..++.+.++|++|+-.
T Consensus 114 ~l~nL~~Ldl~n~~~~~l~dyre~vf~ll~~L~~LD~~ 151 (260)
T KOG2739|consen 114 ELENLKSLDLFNCSVTNLDDYREKVFLLLPSLKYLDGC 151 (260)
T ss_pred hhcchhhhhcccCCccccccHHHHHHHHhhhhcccccc
Confidence 55566666666664432 1112234444555555443
No 68
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=96.89 E-value=4.9e-05 Score=64.94 Aligned_cols=115 Identities=18% Similarity=0.094 Sum_probs=65.2
Q ss_pred CCCCCcEEEeecccCCCC---CCCccccCCcceEEeccc-cccCcCCCccchhhhccccCCCCcEEEeeccc-ccccccc
Q 048125 44 NASNLRELMIGKNGFSGK---VPSLENLHKLQRVIISQN-HLGNYGEKDNLEFVNSLVNASRLELLQISDNN-FGGMLPE 118 (258)
Q Consensus 44 ~~~~L~~L~l~~~~~~~~---~~~~~~l~~L~~L~l~~~-~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~-~~~~~~~ 118 (258)
.++.|+.+.+..+..... .......++|+.|.+.++ ........ ........+++|+.++++.+. +++....
T Consensus 186 ~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~---~~~~~~~~~~~L~~l~l~~~~~isd~~l~ 262 (482)
T KOG1947|consen 186 SCPLLKRLSLSGCSKITDDSLDALALKCPNLEELDLSGCCLLITLSPL---LLLLLLSICRKLKSLDLSGCGLVTDIGLS 262 (482)
T ss_pred hCchhhHhhhcccccCChhhHHHHHhhCchhheecccCcccccccchh---HhhhhhhhcCCcCccchhhhhccCchhHH
Confidence 367777777777644332 122566778888888763 11111110 111234456778888888776 5544444
Q ss_pred cccccccccceEEecccc-cCCc-cCccCCCCCcccEEEeeCCcc
Q 048125 119 AVGNFSTRLGILSVAENQ-LFGN-IPSGLRNLVNLELLDLSGNQF 161 (258)
Q Consensus 119 ~~~~~~~~l~~L~l~~~~-~~~~-~~~~~~~~~~L~~L~l~~~~~ 161 (258)
.+...++.++.|.+..|. +++. +......++.|++|+++++..
T Consensus 263 ~l~~~c~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~~ 307 (482)
T KOG1947|consen 263 ALASRCPNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCHG 307 (482)
T ss_pred HHHhhCCCcceEccCCCCccchhHHHHHHHhcCcccEEeeecCcc
Confidence 444445678888766665 3322 223334566788888887744
No 69
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.65 E-value=4.8e-05 Score=58.52 Aligned_cols=82 Identities=20% Similarity=0.154 Sum_probs=45.2
Q ss_pred CCCCcEEEeecccccccccccccccccccceEEecccccCCccCccCCCCCcccEEEeeCCcccccc-CCcccCccCCcE
Q 048125 99 ASRLELLQISDNNFGGMLPEAVGNFSTRLGILSVAENQLFGNIPSGLRNLVNLELLDLSGNQFTSRI-PGSIGDLQKLQM 177 (258)
Q Consensus 99 ~~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~-~~~~~~~~~L~~ 177 (258)
+.+.++|+..+|.+. .+. ++.-.+.++.|.++-|+++.. ..+..+++|++|++..|.|.+.. -.++.++++|+.
T Consensus 18 l~~vkKLNcwg~~L~-DIs--ic~kMp~lEVLsLSvNkIssL--~pl~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~ 92 (388)
T KOG2123|consen 18 LENVKKLNCWGCGLD-DIS--ICEKMPLLEVLSLSVNKISSL--APLQRCTRLKELYLRKNCIESLDELEYLKNLPSLRT 92 (388)
T ss_pred HHHhhhhcccCCCcc-HHH--HHHhcccceeEEeeccccccc--hhHHHHHHHHHHHHHhcccccHHHHHHHhcCchhhh
Confidence 445666666666655 221 222224666676666666422 22455667777777776665321 124456666777
Q ss_pred EEecCCcc
Q 048125 178 LGLNGNKF 185 (258)
Q Consensus 178 L~l~~~~~ 185 (258)
|+|..|.-
T Consensus 93 LWL~ENPC 100 (388)
T KOG2123|consen 93 LWLDENPC 100 (388)
T ss_pred HhhccCCc
Confidence 76666543
No 70
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.52 E-value=9.4e-05 Score=56.97 Aligned_cols=86 Identities=21% Similarity=0.248 Sum_probs=55.5
Q ss_pred CCCCceEEecCCcccccccccccCCCCCcEEEeecccCCCCCCCccccCCcceEEeccccccCcCCCccchhhhccccCC
Q 048125 21 LPNLEGLNLAGNQFTGPIPVSISNASNLRELMIGKNGFSGKVPSLENLHKLQRVIISQNHLGNYGEKDNLEFVNSLVNAS 100 (258)
Q Consensus 21 ~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~ 100 (258)
+.+++.|++-+|++.++ .-..+++.|+.|.|+-|++.... .+..+++|++|+|..|.+.++ .-..-+.++|
T Consensus 18 l~~vkKLNcwg~~L~DI--sic~kMp~lEVLsLSvNkIssL~-pl~rCtrLkElYLRkN~I~sl------dEL~YLknlp 88 (388)
T KOG2123|consen 18 LENVKKLNCWGCGLDDI--SICEKMPLLEVLSLSVNKISSLA-PLQRCTRLKELYLRKNCIESL------DELEYLKNLP 88 (388)
T ss_pred HHHhhhhcccCCCccHH--HHHHhcccceeEEeeccccccch-hHHHHHHHHHHHHHhcccccH------HHHHHHhcCc
Confidence 45667777777776643 12246777777777777776432 356677777777777777654 2334556777
Q ss_pred CCcEEEeeccccccc
Q 048125 101 RLELLQISDNNFGGM 115 (258)
Q Consensus 101 ~L~~L~l~~~~~~~~ 115 (258)
+|+.|-+..|.-++.
T Consensus 89 sLr~LWL~ENPCc~~ 103 (388)
T KOG2123|consen 89 SLRTLWLDENPCCGE 103 (388)
T ss_pred hhhhHhhccCCcccc
Confidence 777777777765544
No 71
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=95.89 E-value=1.6e-05 Score=67.25 Aligned_cols=183 Identities=24% Similarity=0.284 Sum_probs=80.7
Q ss_pred cceEEeccccccCcCCCccchhhhccccCCCCcEEEeeccccccccccc----ccccccccceEEecccccCCc----cC
Q 048125 71 LQRVIISQNHLGNYGEKDNLEFVNSLVNASRLELLQISDNNFGGMLPEA----VGNFSTRLGILSVAENQLFGN----IP 142 (258)
Q Consensus 71 L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~----~~~~~~~l~~L~l~~~~~~~~----~~ 142 (258)
+..+.+.+|.+...+.. .....+.-.+.|..|++++|.++...... +......+++|++..|..... +.
T Consensus 89 l~~L~L~~~~l~~~~~~---~l~~~l~t~~~L~~L~l~~n~l~~~g~~~l~~~l~~~~~~l~~L~l~~c~l~~~g~~~l~ 165 (478)
T KOG4308|consen 89 LLHLSLANNRLGDRGAE---ELAQALKTLPTLGQLDLSGNNLGDEGARLLCEGLRLPQCLLQTLELVSCSLTSEGAAPLA 165 (478)
T ss_pred HHHhhhhhCccccchHH---HHHHHhcccccHhHhhcccCCCccHhHHHHHhhcccchHHHHHHHhhcccccccchHHHH
Confidence 45555555555443322 33334445555555666665554221111 111112344455544444322 22
Q ss_pred ccCCCCCcccEEEeeCCcccc----ccCCc----ccCccCCcEEEecCCcccc----ccCCCCCCCCC-cceEecccccc
Q 048125 143 SGLRNLVNLELLDLSGNQFTS----RIPGS----IGDLQKLQMLGLNGNKFLG----EIPSSIGNLTL-LMTLNFAENML 209 (258)
Q Consensus 143 ~~~~~~~~L~~L~l~~~~~~~----~~~~~----~~~~~~L~~L~l~~~~~~~----~~~~~~~~~~~-L~~L~l~~n~~ 209 (258)
..+...+.++++++..|.+.. ..+.. +....++++|.+..|.++. .+...+...+. +..+++..|.+
T Consensus 166 ~~L~~~~~l~~l~l~~n~l~~~g~~~l~~~l~~~~~~~~~le~L~L~~~~~t~~~c~~l~~~l~~~~~~~~el~l~~n~l 245 (478)
T KOG4308|consen 166 AVLEKNEHLTELDLSLNGLIELGLLVLSQALESAASPLSSLETLKLSRCGVTSSSCALLDEVLASGESLLRELDLASNKL 245 (478)
T ss_pred HHHhcccchhHHHHHhcccchhhhHHHhhhhhhhhcccccHHHHhhhhcCcChHHHHHHHHHHhccchhhHHHHHHhcCc
Confidence 333334555555555554421 11111 2234556666666665442 11122333333 44466666655
Q ss_pred ccc----CCcccccC-cCCcEEeccCCccccc----cccccccccCcceeEecCCCC
Q 048125 210 EGS----IPSSLGKC-QNLIVLDLYNNNLSGT----IPSEVIGLSSLSIYLDLSQNQ 257 (258)
Q Consensus 210 ~~~----~~~~~~~~-~~L~~L~l~~~~l~~~----~~~~~~~~~~l~~~L~l~~n~ 257 (258)
.+. ....+... ..++.++++.|+|.+. +...+..++.+ .++.++.|+
T Consensus 246 ~d~g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l-~~l~l~~n~ 301 (478)
T KOG4308|consen 246 GDVGVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDLAEVLVSCRQL-EELSLSNNP 301 (478)
T ss_pred chHHHHHHHHHhcccchhhhhhhhhcCCccccchHHHHHHHhhhHHH-HHhhcccCc
Confidence 432 11222222 4556666666666532 23344455555 666666554
No 72
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=95.82 E-value=0.0054 Score=27.97 Aligned_cols=18 Identities=56% Similarity=0.743 Sum_probs=10.1
Q ss_pred CcEEeccCCcccccccccc
Q 048125 223 LIVLDLYNNNLSGTIPSEV 241 (258)
Q Consensus 223 L~~L~l~~~~l~~~~~~~~ 241 (258)
|++|++++|+++ .+|..|
T Consensus 2 L~~Ldls~n~l~-~ip~~~ 19 (22)
T PF00560_consen 2 LEYLDLSGNNLT-SIPSSF 19 (22)
T ss_dssp ESEEEETSSEES-EEGTTT
T ss_pred ccEEECCCCcCE-eCChhh
Confidence 456666666665 455444
No 73
>KOG3864 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.78 E-value=0.0029 Score=46.62 Aligned_cols=81 Identities=22% Similarity=0.250 Sum_probs=52.5
Q ss_pred cccEEEeeCCccccccCCcccCccCCcEEEecCCcccc--ccCCCCCCCCCcceEeccccc-ccccCCcccccCcCCcEE
Q 048125 150 NLELLDLSGNQFTSRIPGSIGDLQKLQMLGLNGNKFLG--EIPSSIGNLTLLMTLNFAENM-LEGSIPSSLGKCQNLIVL 226 (258)
Q Consensus 150 ~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~--~~~~~~~~~~~L~~L~l~~n~-~~~~~~~~~~~~~~L~~L 226 (258)
.++.++-+++.|.....+-+..++.++.|.+.+|..-+ .+...-.-.++|+.|++++|. |++.....+..+++|+.|
T Consensus 102 ~IeaVDAsds~I~~eGle~L~~l~~i~~l~l~~ck~~dD~~L~~l~~~~~~L~~L~lsgC~rIT~~GL~~L~~lknLr~L 181 (221)
T KOG3864|consen 102 KIEAVDASDSSIMYEGLEHLRDLRSIKSLSLANCKYFDDWCLERLGGLAPSLQDLDLSGCPRITDGGLACLLKLKNLRRL 181 (221)
T ss_pred eEEEEecCCchHHHHHHHHHhccchhhhheeccccchhhHHHHHhcccccchheeeccCCCeechhHHHHHHHhhhhHHH
Confidence 56777777777765555666777777777777765432 111111245777888888774 666666777777777777
Q ss_pred eccC
Q 048125 227 DLYN 230 (258)
Q Consensus 227 ~l~~ 230 (258)
.+.+
T Consensus 182 ~l~~ 185 (221)
T KOG3864|consen 182 HLYD 185 (221)
T ss_pred HhcC
Confidence 7655
No 74
>KOG3864 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.66 E-value=0.0047 Score=45.52 Aligned_cols=84 Identities=17% Similarity=0.191 Sum_probs=46.9
Q ss_pred ccceEEecccccCCccCccCCCCCcccEEEeeCCccccc-cCCcc-cCccCCcEEEecCCc-cccccCCCCCCCCCcceE
Q 048125 126 RLGILSVAENQLFGNIPSGLRNLVNLELLDLSGNQFTSR-IPGSI-GDLQKLQMLGLNGNK-FLGEIPSSIGNLTLLMTL 202 (258)
Q Consensus 126 ~l~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~-~~~~~-~~~~~L~~L~l~~~~-~~~~~~~~~~~~~~L~~L 202 (258)
.+++++-+++.+..+.-+.+..+++++.|.+.+|.-.+. .-+.+ ...++|+.|++++|. |++.--..+..+++|+.|
T Consensus 102 ~IeaVDAsds~I~~eGle~L~~l~~i~~l~l~~ck~~dD~~L~~l~~~~~~L~~L~lsgC~rIT~~GL~~L~~lknLr~L 181 (221)
T KOG3864|consen 102 KIEAVDASDSSIMYEGLEHLRDLRSIKSLSLANCKYFDDWCLERLGGLAPSLQDLDLSGCPRITDGGLACLLKLKNLRRL 181 (221)
T ss_pred eEEEEecCCchHHHHHHHHHhccchhhhheeccccchhhHHHHHhcccccchheeeccCCCeechhHHHHHHHhhhhHHH
Confidence 466666666665544445566677777777776633211 11111 134677777777763 443323345566777777
Q ss_pred ecccccc
Q 048125 203 NFAENML 209 (258)
Q Consensus 203 ~l~~n~~ 209 (258)
.+.+-..
T Consensus 182 ~l~~l~~ 188 (221)
T KOG3864|consen 182 HLYDLPY 188 (221)
T ss_pred HhcCchh
Confidence 6666543
No 75
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=94.41 E-value=0.028 Score=23.76 Aligned_cols=13 Identities=62% Similarity=0.759 Sum_probs=5.4
Q ss_pred CCcEEeccCCccc
Q 048125 222 NLIVLDLYNNNLS 234 (258)
Q Consensus 222 ~L~~L~l~~~~l~ 234 (258)
+|+.|++++|+++
T Consensus 2 ~L~~L~l~~n~L~ 14 (17)
T PF13504_consen 2 NLRTLDLSNNRLT 14 (17)
T ss_dssp T-SEEEETSS--S
T ss_pred ccCEEECCCCCCC
Confidence 4555555555544
No 76
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=94.31 E-value=0.0001 Score=62.51 Aligned_cols=38 Identities=29% Similarity=0.354 Sum_probs=20.6
Q ss_pred CCcceEecccccccccCCc----ccccCcCCcEEeccCCccc
Q 048125 197 TLLMTLNFAENMLEGSIPS----SLGKCQNLIVLDLYNNNLS 234 (258)
Q Consensus 197 ~~L~~L~l~~n~~~~~~~~----~~~~~~~L~~L~l~~~~l~ 234 (258)
+.++.+++..|.+.+.... .+..+++++.+.+.+|.+.
T Consensus 262 ~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l~ 303 (478)
T KOG4308|consen 262 ETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNPLT 303 (478)
T ss_pred hhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCccc
Confidence 4556666666666543322 2333556666666666655
No 77
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=93.02 E-value=0.0024 Score=48.21 Aligned_cols=86 Identities=17% Similarity=0.163 Sum_probs=57.3
Q ss_pred CCCCcccEEEeeCCccccccCCcccCccCCcEEEecCCccccccCCCCCCCCCcceEecccccccccCCcccccCcCCcE
Q 048125 146 RNLVNLELLDLSGNQFTSRIPGSIGDLQKLQMLGLNGNKFLGEIPSSIGNLTLLMTLNFAENMLEGSIPSSLGKCQNLIV 225 (258)
Q Consensus 146 ~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~L~~ 225 (258)
....+.+.||++.|.+. ..-..|+-++.++.++++.+.+. ..|.-++....+..++...|... ..|.+.+..+.++.
T Consensus 39 ~~~kr~tvld~~s~r~v-n~~~n~s~~t~~~rl~~sknq~~-~~~~d~~q~~e~~~~~~~~n~~~-~~p~s~~k~~~~k~ 115 (326)
T KOG0473|consen 39 ASFKRVTVLDLSSNRLV-NLGKNFSILTRLVRLDLSKNQIK-FLPKDAKQQRETVNAASHKNNHS-QQPKSQKKEPHPKK 115 (326)
T ss_pred hccceeeeehhhhhHHH-hhccchHHHHHHHHHhccHhhHh-hChhhHHHHHHHHHHHhhccchh-hCCccccccCCcch
Confidence 34456677777777665 34445666677777777777766 66666666666666676666665 56667777777777
Q ss_pred EeccCCccc
Q 048125 226 LDLYNNNLS 234 (258)
Q Consensus 226 L~l~~~~l~ 234 (258)
++..++.+.
T Consensus 116 ~e~k~~~~~ 124 (326)
T KOG0473|consen 116 NEQKKTEFF 124 (326)
T ss_pred hhhccCcch
Confidence 777776654
No 78
>PF13516 LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1DFJ_I 2BNH_A 3VQ1_A 3VQ2_A 2Z64_A 2OMX_A ....
Probab=91.57 E-value=0.042 Score=25.49 Aligned_cols=14 Identities=50% Similarity=0.674 Sum_probs=5.7
Q ss_pred cCCcEEeccCCccc
Q 048125 221 QNLIVLDLYNNNLS 234 (258)
Q Consensus 221 ~~L~~L~l~~~~l~ 234 (258)
++|+.|++++|+|+
T Consensus 2 ~~L~~L~l~~n~i~ 15 (24)
T PF13516_consen 2 PNLETLDLSNNQIT 15 (24)
T ss_dssp TT-SEEE-TSSBEH
T ss_pred CCCCEEEccCCcCC
Confidence 34445555555444
No 79
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=91.33 E-value=0.17 Score=23.89 Aligned_cols=18 Identities=56% Similarity=0.757 Sum_probs=10.3
Q ss_pred cCCcEEeccCCcccccccc
Q 048125 221 QNLIVLDLYNNNLSGTIPS 239 (258)
Q Consensus 221 ~~L~~L~l~~~~l~~~~~~ 239 (258)
++|+.|++++|+|+ .+|.
T Consensus 2 ~~L~~L~L~~N~l~-~lp~ 19 (26)
T smart00369 2 PNLRELDLSNNQLS-SLPP 19 (26)
T ss_pred CCCCEEECCCCcCC-cCCH
Confidence 45566666666666 4443
No 80
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=91.33 E-value=0.17 Score=23.89 Aligned_cols=18 Identities=56% Similarity=0.757 Sum_probs=10.3
Q ss_pred cCCcEEeccCCcccccccc
Q 048125 221 QNLIVLDLYNNNLSGTIPS 239 (258)
Q Consensus 221 ~~L~~L~l~~~~l~~~~~~ 239 (258)
++|+.|++++|+|+ .+|.
T Consensus 2 ~~L~~L~L~~N~l~-~lp~ 19 (26)
T smart00370 2 PNLRELDLSNNQLS-SLPP 19 (26)
T ss_pred CCCCEEECCCCcCC-cCCH
Confidence 45566666666666 4443
No 81
>smart00368 LRR_RI Leucine rich repeat, ribonuclease inhibitor type.
Probab=84.75 E-value=0.75 Score=22.18 Aligned_cols=13 Identities=62% Similarity=0.677 Sum_probs=8.1
Q ss_pred cCcceeEecCCCCC
Q 048125 245 SSLSIYLDLSQNQL 258 (258)
Q Consensus 245 ~~l~~~L~l~~n~~ 258 (258)
++| ++|||++|.|
T Consensus 2 ~~L-~~LdL~~N~i 14 (28)
T smart00368 2 PSL-RELDLSNNKL 14 (28)
T ss_pred Ccc-CEEECCCCCC
Confidence 345 6777777654
No 82
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=84.01 E-value=0.035 Score=42.17 Aligned_cols=83 Identities=20% Similarity=0.199 Sum_probs=60.0
Q ss_pred cccceEEecccccCCccCccCCCCCcccEEEeeCCccccccCCcccCccCCcEEEecCCccccccCCCCCCCCCcceEec
Q 048125 125 TRLGILSVAENQLFGNIPSGLRNLVNLELLDLSGNQFTSRIPGSIGDLQKLQMLGLNGNKFLGEIPSSIGNLTLLMTLNF 204 (258)
Q Consensus 125 ~~l~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l 204 (258)
...+.|+++.+... .+-..|..++.+..++++.|.+. ..|..+.....+..++...|... ..|..++..++++.++.
T Consensus 42 kr~tvld~~s~r~v-n~~~n~s~~t~~~rl~~sknq~~-~~~~d~~q~~e~~~~~~~~n~~~-~~p~s~~k~~~~k~~e~ 118 (326)
T KOG0473|consen 42 KRVTVLDLSSNRLV-NLGKNFSILTRLVRLDLSKNQIK-FLPKDAKQQRETVNAASHKNNHS-QQPKSQKKEPHPKKNEQ 118 (326)
T ss_pred ceeeeehhhhhHHH-hhccchHHHHHHHHHhccHhhHh-hChhhHHHHHHHHHHHhhccchh-hCCccccccCCcchhhh
Confidence 36777777777554 33444556667777888888776 67777777777777777777765 67778888888888888
Q ss_pred cccccc
Q 048125 205 AENMLE 210 (258)
Q Consensus 205 ~~n~~~ 210 (258)
-++.+.
T Consensus 119 k~~~~~ 124 (326)
T KOG0473|consen 119 KKTEFF 124 (326)
T ss_pred ccCcch
Confidence 888765
No 83
>KOG3763 consensus mRNA export factor TAP/MEX67 [RNA processing and modification]
Probab=80.54 E-value=0.84 Score=39.22 Aligned_cols=92 Identities=14% Similarity=0.041 Sum_probs=52.6
Q ss_pred cchhccCCCCceEEecCCcccccc--cccccCCCCCcEEEeecccCCC-CCCC--ccccCCcceEEeccccccCcCCCcc
Q 048125 15 SDLGFTLPNLEGLNLAGNQFTGPI--PVSISNASNLRELMIGKNGFSG-KVPS--LENLHKLQRVIISQNHLGNYGEKDN 89 (258)
Q Consensus 15 ~~~~~~~~~L~~L~l~~~~~~~~~--~~~~~~~~~L~~L~l~~~~~~~-~~~~--~~~l~~L~~L~l~~~~~~~~~~~~~ 89 (258)
..+..+.+.+..+++++|.+-... ..--...|+|+.|+|++|.... ...+ .-+...|++|.+.+|.+......-.
T Consensus 211 ~~~~~n~p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N~~~~~~~~el~K~k~l~Leel~l~GNPlc~tf~~~s 290 (585)
T KOG3763|consen 211 KHIEENFPEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHNHSKISSESELDKLKGLPLEELVLEGNPLCTTFSDRS 290 (585)
T ss_pred HHhhcCCcceeeeecccchhhchhhhhHHHHhcchhheeecccchhhhcchhhhhhhcCCCHHHeeecCCccccchhhhH
Confidence 345567888888888888665321 1112356889999999883321 1122 2345678889998888765321111
Q ss_pred chhhhccccCCCCcEEE
Q 048125 90 LEFVNSLVNASRLELLQ 106 (258)
Q Consensus 90 ~~~~~~~~~~~~L~~L~ 106 (258)
.-+...-..+|+|..||
T Consensus 291 ~yv~~i~~~FPKL~~LD 307 (585)
T KOG3763|consen 291 EYVSAIRELFPKLLRLD 307 (585)
T ss_pred HHHHHHHHhcchheeec
Confidence 01111122567777666
No 84
>smart00367 LRR_CC Leucine-rich repeat - CC (cysteine-containing) subfamily.
Probab=78.94 E-value=0.69 Score=21.76 Aligned_cols=16 Identities=44% Similarity=0.706 Sum_probs=10.2
Q ss_pred CCCCceEEecCC-cccc
Q 048125 21 LPNLEGLNLAGN-QFTG 36 (258)
Q Consensus 21 ~~~L~~L~l~~~-~~~~ 36 (258)
|++|++|++.+| .+++
T Consensus 1 c~~L~~L~l~~C~~itD 17 (26)
T smart00367 1 CPNLRELDLSGCTNITD 17 (26)
T ss_pred CCCCCEeCCCCCCCcCH
Confidence 466777777777 3543
No 85
>smart00364 LRR_BAC Leucine-rich repeats, bacterial type.
Probab=76.28 E-value=1.9 Score=20.46 Aligned_cols=18 Identities=33% Similarity=0.606 Sum_probs=11.6
Q ss_pred cCCcEEeccCCcccccccc
Q 048125 221 QNLIVLDLYNNNLSGTIPS 239 (258)
Q Consensus 221 ~~L~~L~l~~~~l~~~~~~ 239 (258)
++|+.|++++|+++ .+|.
T Consensus 2 ~~L~~L~vs~N~Lt-~LPe 19 (26)
T smart00364 2 PSLKELNVSNNQLT-SLPE 19 (26)
T ss_pred cccceeecCCCccc-cCcc
Confidence 35677777777776 4443
No 86
>smart00365 LRR_SD22 Leucine-rich repeat, SDS22-like subfamily.
Probab=74.30 E-value=2.9 Score=19.84 Aligned_cols=14 Identities=43% Similarity=0.529 Sum_probs=11.4
Q ss_pred cCCcEEeccCCccc
Q 048125 221 QNLIVLDLYNNNLS 234 (258)
Q Consensus 221 ~~L~~L~l~~~~l~ 234 (258)
.+|+.|++++|+|+
T Consensus 2 ~~L~~L~L~~NkI~ 15 (26)
T smart00365 2 TNLEELDLSQNKIK 15 (26)
T ss_pred CccCEEECCCCccc
Confidence 56788888888886
No 87
>KOG3763 consensus mRNA export factor TAP/MEX67 [RNA processing and modification]
Probab=72.96 E-value=1.8 Score=37.37 Aligned_cols=63 Identities=25% Similarity=0.253 Sum_probs=35.3
Q ss_pred CccCCcEEEecCCcccc--ccCCCCCCCCCcceEecccc--cccccCCcccc--cCcCCcEEeccCCcccc
Q 048125 171 DLQKLQMLGLNGNKFLG--EIPSSIGNLTLLMTLNFAEN--MLEGSIPSSLG--KCQNLIVLDLYNNNLSG 235 (258)
Q Consensus 171 ~~~~L~~L~l~~~~~~~--~~~~~~~~~~~L~~L~l~~n--~~~~~~~~~~~--~~~~L~~L~l~~~~l~~ 235 (258)
..+.+..+++++|++.. .+...-...|+|++|+|++| .+. ....+. +...|++|-+.||.+.+
T Consensus 216 n~p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N~~~~~--~~~el~K~k~l~Leel~l~GNPlc~ 284 (585)
T KOG3763|consen 216 NFPEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHNHSKIS--SESELDKLKGLPLEELVLEGNPLCT 284 (585)
T ss_pred CCcceeeeecccchhhchhhhhHHHHhcchhheeecccchhhhc--chhhhhhhcCCCHHHeeecCCcccc
Confidence 34566777777777653 11222244677777888777 332 111222 23456777777777753
No 88
>KOG4242 consensus Predicted myosin-I-binding protein [Cell motility]
Probab=44.48 E-value=50 Score=28.49 Aligned_cols=34 Identities=26% Similarity=0.302 Sum_probs=17.6
Q ss_pred CcEEeccCCccccc---cccccccccCcceeEecCCCC
Q 048125 223 LIVLDLYNNNLSGT---IPSEVIGLSSLSIYLDLSQNQ 257 (258)
Q Consensus 223 L~~L~l~~~~l~~~---~~~~~~~~~~l~~~L~l~~n~ 257 (258)
+..+.++-|+++.. ........+.+ .+||++||-
T Consensus 415 l~el~ls~~~lka~l~s~in~l~stqtl-~kldisgn~ 451 (553)
T KOG4242|consen 415 LAELSLSPGPLKAGLESAINKLLSTQTL-AKLDISGNG 451 (553)
T ss_pred ccCcccCCCcccccHHHHHHhhccCccc-ccccccCCC
Confidence 34455555555411 12334455666 777777764
No 89
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=23.40 E-value=69 Score=34.15 Aligned_cols=32 Identities=28% Similarity=0.518 Sum_probs=27.9
Q ss_pred CCCcCcccCCCCcchhccCCCCceEEecCCccc
Q 048125 3 DFPFNQLQGSLPSDLGFTLPNLEGLNLAGNQFT 35 (258)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~ 35 (258)
||++|+|+ .+|...+..+++|++|+|.+|-+.
T Consensus 1 DLSnN~Ls-tLp~g~F~~L~sL~~LdLsgNPw~ 32 (2740)
T TIGR00864 1 DISNNKIS-TIEEGICANLCNLSEIDLSGNPFE 32 (2740)
T ss_pred CCCCCcCC-ccChHHhccCCCceEEEeeCCccc
Confidence 68899999 999999999999999999887543
No 90
>PF05725 FNIP: FNIP Repeat; InterPro: IPR008615 This repeat is approximately 22 residues long and is only found in Dictyostelium discoideum (Slime mould). It appears to be related to IPR001611 from INTERPRO. The alignment consists of two tandem repeats. It is termed the FNIP repeat after the pattern of conserved residues.
Probab=21.99 E-value=1.4e+02 Score=15.82 Aligned_cols=6 Identities=33% Similarity=0.296 Sum_probs=2.3
Q ss_pred ccEEEe
Q 048125 151 LELLDL 156 (258)
Q Consensus 151 L~~L~l 156 (258)
+++|.+
T Consensus 14 l~~L~~ 19 (44)
T PF05725_consen 14 LKSLIF 19 (44)
T ss_pred CeEEEE
Confidence 333333
Done!