Your job contains 1 sequence.
>048129
VIRAATAIYLQSSSHSSSNLSLLYHFCGGSAINISEEESKDVELVHLLILCAEKIGSQQF
DRASTLLDHCENFSSKIGNSVERVVHYFVKALQERFNRETGKITSKRVKGEEIQLLQPEE
TILSLRPALVACYKESSFYQATLFAGTQAIIERVASAKRIHLIDLAIRSGSHCIVLMQAL
ATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVLVTETKDLNEDKF
DLNAGEAVAVYSPILLSRTRHPDFLIKMLRKISPCVMVIIEVEANHNSQNFEDRFFEVLF
HYSASFDCLKVSMARCDPERVTFEEMYLGQHIRNIIATEGEERIFRHMKIDAWRKFFHRF
GMVEAELSTSSLFQAELVIKNFAFASYLTLDRNGQCLIVGWKGSPQLSLSVW
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 048129
(412 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2201557 - symbol:RGL1 "RGA-like 1" species:370... 462 8.1e-44 1
TAIR|locus:2099624 - symbol:RGL2 "RGA-like 2" species:370... 459 1.7e-43 1
TAIR|locus:2157477 - symbol:RGL3 "RGA-like protein 3" spe... 399 3.9e-37 1
TAIR|locus:2025022 - symbol:SCL14 "SCARECROW-like 14" spe... 404 7.6e-37 1
TAIR|locus:2006747 - symbol:GAI "GIBBERELLIC ACID INSENSI... 394 1.3e-36 1
TAIR|locus:2008086 - symbol:SCL3 "AT1G50420" species:3702... 251 1.7e-36 2
TAIR|locus:2005516 - symbol:RGA1 "REPRESSOR OF GA1-3 1" s... 394 2.0e-36 1
TAIR|locus:2165685 - symbol:AT5G41920 "AT5G41920" species... 390 3.5e-36 1
TAIR|locus:2020487 - symbol:LAS "AT1G55580" species:3702 ... 304 2.4e-35 2
TAIR|locus:2148293 - symbol:AT5G59450 species:3702 "Arabi... 355 1.0e-34 2
TAIR|locus:2075155 - symbol:AT3G46600 species:3702 "Arabi... 376 2.3e-34 1
TAIR|locus:2080345 - symbol:SCR "SCARECROW" species:3702 ... 375 5.8e-34 1
TAIR|locus:2025032 - symbol:AT1G07520 "AT1G07520" species... 369 3.4e-33 1
TAIR|locus:2008076 - symbol:SCL5 "AT1G50600" species:3702... 359 2.2e-32 1
TAIR|locus:2164783 - symbol:PAT1 "AT5G48150" species:3702... 346 1.6e-31 1
TAIR|locus:2015243 - symbol:AT1G63100 "AT1G63100" species... 347 7.0e-31 1
TAIR|locus:2044973 - symbol:SCL21 "AT2G04890" species:370... 339 8.8e-31 1
TAIR|locus:2040701 - symbol:AT2G37650 species:3702 "Arabi... 341 4.1e-30 1
TAIR|locus:2174974 - symbol:AT5G66770 "AT5G66770" species... 329 4.2e-29 1
TAIR|locus:2132482 - symbol:AT4G08250 "AT4G08250" species... 310 1.9e-27 1
TAIR|locus:2026982 - symbol:SCL1 "AT1G21450" species:3702... 277 4.7e-22 1
TAIR|locus:2101694 - symbol:AT3G50650 "AT3G50650" species... 261 4.0e-20 1
UNIPROTKB|Q84MM9 - symbol:MOC1 "Protein MONOCULM 1" speci... 150 4.0e-17 2
TAIR|locus:2083073 - symbol:AT3G49950 "AT3G49950" species... 145 2.4e-16 2
TAIR|locus:2115340 - symbol:HAM4 "AT4G36710" species:3702... 192 3.1e-12 1
TAIR|locus:2120106 - symbol:SHR "AT4G37650" species:3702 ... 183 3.8e-11 1
TAIR|locus:2126901 - symbol:HAM3 "AT4G00150" species:3702... 180 9.0e-11 1
UNIPROTKB|Q6DLS1 - symbol:SCL1 "SCARECROW-like protein" s... 169 1.1e-09 1
TAIR|locus:2101801 - symbol:HAM2 "AT3G60630" species:3702... 171 1.1e-09 1
TAIR|locus:2055622 - symbol:HAM1 "AT2G45160" species:3702... 165 5.2e-09 1
TAIR|locus:2184625 - symbol:SCL8 "AT5G52510" species:3702... 159 2.4e-08 1
TAIR|locus:1009023400 - symbol:AT5G67411 "AT5G67411" spec... 124 1.2e-05 1
>TAIR|locus:2201557 [details] [associations]
symbol:RGL1 "RGA-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IMP]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=IGI;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009737 GO:GO:0005634 GO:GO:0030154 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0009908 GO:GO:0042538
GO:GO:2000377 EMBL:AC020665 GO:GO:0040029 GO:GO:0009867
GO:GO:0009863 GO:GO:0009740 HOGENOM:HOG000238577 KO:K14494
GO:GO:0009938 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AJ224957 EMBL:AY048749 EMBL:AY070035
EMBL:AY096506 IPI:IPI00518407 PIR:G96688 RefSeq:NP_176809.1
UniGene:At.26400 UniGene:At.75607 ProteinModelPortal:Q9C8Y3
SMR:Q9C8Y3 IntAct:Q9C8Y3 STRING:Q9C8Y3 EnsemblPlants:AT1G66350.1
GeneID:842953 KEGG:ath:AT1G66350 GeneFarm:4239 TAIR:At1g66350
eggNOG:NOG314007 InParanoid:Q9C8Y3 OMA:TSAWRIN PhylomeDB:Q9C8Y3
ProtClustDB:CLSN2914366 Genevestigator:Q9C8Y3 GermOnline:AT1G66350
Uniprot:Q9C8Y3
Length = 511
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 116/387 (29%), Positives = 196/387 (50%)
Query: 31 AINISEEESKDVELVHLLILCAEKIGSQQFDRASTLLDHCENFSSKIGNSVERVVHYFVK 90
++ + + + V LVH L+ CAE + A L+ H +S ++ +V YF +
Sbjct: 139 SVVVLDSQETGVRLVHALLACAEAVQQNNLKLADALVKHVGLLASSQAGAMRKVATYFAE 198
Query: 91 ALQERFNRETGKITSKRVKGEEIQLLQPEETILSLRPALVACYKESSFYQATLFAGTQAI 150
L R R I + +++ L +T+ + Y+ + + F QAI
Sbjct: 199 GLARRIYR----IYPR----DDVALSSFSDTLQ------IHFYESCPYLKFAHFTANQAI 244
Query: 151 IERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKR 210
+E A+A+++H+IDL + G L+QALA R P + ++T +G S ++E G +
Sbjct: 245 LEVFATAEKVHVIDLGLNHGLQWPALIQALALRPNGPPDF-RLTGIGYSLTD-IQEVGWK 302
Query: 211 LAYFAETWNLPFSFKIVLVTETKDLNEDKFDLNAG-EAVAVYSPILLSRT-RHP---DFL 265
L A T + F FK + + DL + D+ G E+VAV S L R HP D
Sbjct: 303 LGQLASTIGVNFEFKSIALNNLSDLKPEMLDIRPGLESVAVNSVFELHRLLAHPGSIDKF 362
Query: 266 IKMLRKISPCVMVIIEVEANHNSQNFEDRFFEVLFHYSASFDCLKVSMARCDPERVTFEE 325
+ ++ I P +M ++E EANHN F DRF E L +YS+ FD L+ ++ +RV E
Sbjct: 363 LSTIKSIRPDIMTVVEQEANHNGTVFLDRFTESLHYYSSLFDSLEGPPSQ---DRV-MSE 418
Query: 326 MYLGQHIRNIIATEGEERIFRHMKIDAWRKFFHRFGMVEAELSTSSLFQAELVIKNFAFA 385
++LG+ I N++A EGE+R+ RH ++ WR F G + +++ QA +++ +A A
Sbjct: 419 LFLGRQILNLVACEGEDRVERHETLNQWRNRFGLGGFKPVSIGSNAYKQASMLLALYAGA 478
Query: 386 SYLTLDRNGQCLIVGWKGSPQLSLSVW 412
++ N CL++GW+ P ++ S W
Sbjct: 479 DGYNVEENEGCLLLGWQTRPLIATSAW 505
>TAIR|locus:2099624 [details] [associations]
symbol:RGL2 "RGA-like 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0010187 "negative regulation of seed
germination" evidence=IMP] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=TAS]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:2000377 "regulation of reactive oxygen species metabolic
process" evidence=IGI] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009062 "fatty acid catabolic process"
evidence=RCA] [GO:0009686 "gibberellin biosynthetic process"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] Pfam:PF03514 GO:GO:0009737 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0030154 GO:GO:0006952
GO:GO:0009723 GO:GO:0003700 GO:GO:0006351 GO:GO:0010187
GO:GO:0009908 GO:GO:0042538 EMBL:AC009895 GO:GO:2000377
GO:GO:0040029 GO:GO:0009867 GO:GO:0009863 GO:GO:0009740
eggNOG:NOG243696 HOGENOM:HOG000238577 KO:K14494 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AK118009 IPI:IPI00521981 RefSeq:NP_186995.1
UniGene:At.18489 UniGene:At.67027 ProteinModelPortal:Q8GXW1
SMR:Q8GXW1 IntAct:Q8GXW1 STRING:Q8GXW1 EnsemblPlants:AT3G03450.1
GeneID:821251 KEGG:ath:AT3G03450 GeneFarm:4240 TAIR:At3g03450
InParanoid:Q8GXW1 OMA:MLSELNN PhylomeDB:Q8GXW1
ProtClustDB:CLSN2684085 Genevestigator:Q8GXW1 GermOnline:AT3G03450
Uniprot:Q8GXW1
Length = 547
Score = 459 (166.6 bits), Expect = 1.7e-43, P = 1.7e-43
Identities = 116/392 (29%), Positives = 194/392 (49%)
Query: 30 SAINISEEESKDVELVHLLILCAEKIGSQQFDRASTLLDHCENFSSKIGNSVERVVHYFV 89
S + + +E+ V LVH L+ CAE I + + A L+ + ++ +V YF
Sbjct: 167 SVVLVDSQET-GVRLVHALVACAEAIHQENLNLADALVKRVGTLAGSQAGAMGKVATYFA 225
Query: 90 KALQERFNRETGKITSKRVKGEEIQLLQPE-ETILSLRPALVACYKESSFYQATLFAGTQ 148
+AL R R+ T++ + + P E +L + Y+ + + F Q
Sbjct: 226 QALARRIYRD---YTAET---DVCAAVNPSFEEVLEMH-----FYESCPYLKFAHFTANQ 274
Query: 149 AIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVG---SSSKQRME 205
AI+E V +A+R+H+IDL + G LMQALA R P ++T +G + + ++
Sbjct: 275 AILEAVTTARRVHVIDLGLNQGMQWPALMQALALRPGGPPSF-RLTGIGPPQTENSDSLQ 333
Query: 206 ETGKRLAYFAETWNLPFSFKIVLVTETKDLNEDKFDLNA-GEAVAVYSPI----LLSRTR 260
+ G +LA FA+ + F FK + DL + F+ E + V S LL+R+
Sbjct: 334 QLGWKLAQFAQNMGVEFEFKGLAAESLSDLEPEMFETRPESETLVVNSVFELHRLLARSG 393
Query: 261 HPDFLIKMLRKISPCVMVIIEVEANHNSQNFEDRFFEVLFHYSASFDCLKVSMARCDPER 320
+ L+ ++ I P ++ ++E EANHN F DRF E L +YS+ FD L+ S + +R
Sbjct: 394 SIEKLLNTVKAIKPSIVTVVEQEANHNGIVFLDRFNEALHYYSSLFDSLEDSYSLPSQDR 453
Query: 321 VTFEEMYLGQHIRNIIATEGEERIFRHMKIDAWRKFFHRFGMVEAELSTSSLFQAELVIK 380
V E+YLG+ I N++A EG +R+ RH WR G L +S+ QA +++
Sbjct: 454 V-MSEVYLGRQILNVVAAEGSDRVERHETAAQWRIRMKSAGFDPIHLGSSAFKQASMLLS 512
Query: 381 NFAFASYLTLDRNGQCLIVGWKGSPQLSLSVW 412
+A ++ N CL++GW+ P ++ S W
Sbjct: 513 LYATGDGYRVEENDGCLMIGWQTRPLITTSAW 544
>TAIR|locus:2157477 [details] [associations]
symbol:RGL3 "RGA-like protein 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP;ISS] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;TAS] [GO:0009686 "gibberellin
biosynthetic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0048444 "floral
organ morphogenesis" evidence=RCA] Pfam:PF03514 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003700
GO:GO:0006351 GO:GO:0040029 EMBL:AL391150 GO:GO:0009740
HOGENOM:HOG000238577 KO:K14494 InterPro:IPR021914
InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
ProtClustDB:CLSN2684085 EMBL:AK117226 EMBL:BT005905 IPI:IPI00544591
PIR:T51475 RefSeq:NP_197251.1 UniGene:At.31541
ProteinModelPortal:Q9LF53 SMR:Q9LF53 PaxDb:Q9LF53 PRIDE:Q9LF53
EnsemblPlants:AT5G17490.1 GeneID:831615 KEGG:ath:AT5G17490
GeneFarm:4241 TAIR:At5g17490 eggNOG:NOG300920 InParanoid:Q9LF53
OMA:RRIYRIH PhylomeDB:Q9LF53 Genevestigator:Q9LF53
GermOnline:AT5G17490 Uniprot:Q9LF53
Length = 523
Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
Identities = 111/381 (29%), Positives = 179/381 (46%)
Query: 38 ESKDVELVHLLILCAEKIGSQQFDRASTLLDHCENFSSKIGNSVERVVHYFVKALQERFN 97
E V LV L+ CAE + + A L+ ++ ++ +V YF +AL R
Sbjct: 151 EETGVRLVQALVACAEAVQLENLSLADALVKRVGLLAASQAGAMGKVATYFAEALARRIY 210
Query: 98 RETGKITSKRVKGEEIQLLQPEETILSLRPALVACYKESSFYQATLFAGTQAIIERVASA 157
R + EEI LQ + Y + + F QAI+E V ++
Sbjct: 211 RIHPSAAAIDPSFEEI--LQ------------MNFYDSCPYLKFAHFTANQAILEAVTTS 256
Query: 158 KRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGS-SSKQRMEETGKRLAYFAE 216
+ +H+IDL + G LMQALA R P ++T VG+ S+++ ++E G +LA A+
Sbjct: 257 RVVHVIDLGLNQGMQWPALMQALALRPGGPPSF-RLTGVGNPSNREGIQELGWKLAQLAQ 315
Query: 217 TWNLPFSFKIVLVTETKDLNEDKFDLNA-GEAVAVYSPI----LLSRTRHPDFLIKMLRK 271
+ F F + DL D F+ E + V S +LS+ + L+ ++
Sbjct: 316 AIGVEFKFNGLTTERLSDLEPDMFETRTESETLVVNSVFELHPVLSQPGSIEKLLATVKA 375
Query: 272 ISPCVMVIIEVEANHNSQNFEDRFFEVLFHYSASFDCLKVSMARCDPERVTFEEMYLGQH 331
+ P ++ ++E EANHN F DRF E L +YS+ FD L+ + +RV E+YLG+
Sbjct: 376 VKPGLVTVVEQEANHNGDVFLDRFNEALHYYSSLFDSLEDGVVIPSQDRV-MSEVYLGRQ 434
Query: 332 IRNIIATEGEERIFRHMKIDAWRKFFHRFGMVEAELSTSSLFQAELVIKNFAFASYLTLD 391
I N++ATEG +RI RH + WRK G L + + QA L++ ++
Sbjct: 435 ILNLVATEGSDRIERHETLAQWRKRMGSAGFDPVNLGSDAFKQASLLLALSGGGDGYRVE 494
Query: 392 RNGQCLIVGWKGSPQLSLSVW 412
N L++ W+ P ++ S W
Sbjct: 495 ENDGSLMLAWQTKPLIAASAW 515
>TAIR|locus:2025022 [details] [associations]
symbol:SCL14 "SCARECROW-like 14" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009410 "response to xenobiotic stimulus" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005634 GO:GO:0045893 GO:GO:0003700
GO:GO:0006351 GO:GO:0009410 EMBL:AC022464 InterPro:IPR005202
PROSITE:PS50985 HOGENOM:HOG000238576 EMBL:AF036309 IPI:IPI00525012
PIR:T51232 RefSeq:NP_172233.1 UniGene:At.21921 STRING:Q9XE58
PaxDb:Q9XE58 PRIDE:Q9XE58 EnsemblPlants:AT1G07530.1 GeneID:837267
KEGG:ath:AT1G07530 GeneFarm:4250 TAIR:At1g07530 eggNOG:NOG319005
OMA:HEDFVVD PhylomeDB:Q9XE58 Genevestigator:Q9XE58 Uniprot:Q9XE58
Length = 769
Score = 404 (147.3 bits), Expect = 7.6e-37, P = 7.6e-37
Identities = 119/398 (29%), Positives = 196/398 (49%)
Query: 33 NISEEESKDVELVHLLILCAEKIGSQQFDRASTLLDHCENFSSKIGNSVERVVHYFVKAL 92
N S++E+ D+ LL+LCA+ + A+ +L SS +GN ER+ HYF +L
Sbjct: 384 NDSKKETADLRT--LLVLCAQAVSVDDRRTANEMLRQIREHSSPLGNGSERLAHYFANSL 441
Query: 93 QERFNRETGK-----ITSKRVKGEEIQLLQPEETILSLRPALVACYKESSFYQATLFAGT 147
+ R TG ++SK+ + +L+ +T +S+ P +K++ A +FA
Sbjct: 442 EARL-AGTGTQIYTALSSKKTSAAD--MLKAYQTYMSVCP-----FKKA----AIIFAN- 488
Query: 148 QAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAV-----GSSSKQ 202
+++ A+A IH+ID I G L+ L+ + L+IT + G +
Sbjct: 489 HSMMRFTANANTIHIIDFGISYGFQWPALIHRLSLSRPGGSPKLRITGIELPQRGFRPAE 548
Query: 203 RMEETGKRLAYFAETWNLPFSFKIVLVTETKDLNEDKFDLNAGEAVAVYSPI----LLSR 258
++ETG RLA + + N+PF + + + + + + L GE V V S LL
Sbjct: 549 GVQETGHRLARYCQRHNVPFEYNAI-AQKWETIQVEDLKLRQGEYVVVNSLFRFRNLLDE 607
Query: 259 T---RHP-DFLIKMLRKISPCVMVIIEVEANHNSQNFEDRFFEVLFHYSASFDCLKVSMA 314
T P D ++K++RKI+P V + + N+N+ F RF E LFHYSA FD +A
Sbjct: 608 TVLVNSPRDAVLKLIRKINPNVFIPAILSGNYNAPFFVTRFREALFHYSAVFDMCDSKLA 667
Query: 315 RCDPERVTFEEMYLGQHIRNIIATEGEERIFRHMKIDAWRKFFHRFGMVEAELSTSSLFQ 374
R D R+ +E+ + G+ I N++A EG ER+ R W+ R G + L +
Sbjct: 668 REDEMRLMYEKEFYGREIVNVVACEGTERVERPETYKQWQARLIRAGFRQLPLEKELMQN 727
Query: 375 AELVIKNFAFASYLTLDRNGQCLIVGWKGSPQLSLSVW 412
+L I+N + +D+NG L+ GWKG + S+W
Sbjct: 728 LKLKIEN-GYDKNFDVDQNGNWLLQGWKGRIVYASSLW 764
>TAIR|locus:2006747 [details] [associations]
symbol:GAI "GIBBERELLIC ACID INSENSITIVE" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA;TAS] [GO:0009938 "negative regulation of gibberellic
acid mediated signaling pathway" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010233 "phloem transport"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IGI]
[GO:0009723 "response to ethylene stimulus" evidence=IGI;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:0010187 "negative regulation of seed germination" evidence=IGI]
[GO:0010218 "response to far red light" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0006808 "regulation of nitrogen utilization"
evidence=IMP] Pfam:PF03514 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0010218 GO:GO:0010187
GO:GO:0006808 GO:GO:0042538 GO:GO:2000377 EMBL:AC006917
GO:GO:0010233 GO:GO:0040029 GO:GO:0009867 GO:GO:0009863
GO:GO:0009740 EMBL:Y11337 EMBL:Y15193 EMBL:AY058194 EMBL:AY142002
IPI:IPI00535232 PIR:H86282 RefSeq:NP_172945.1 UniGene:At.15032
UniGene:At.75604 PDB:2ZSH PDB:2ZSI PDBsum:2ZSH PDBsum:2ZSI
ProteinModelPortal:Q9LQT8 SMR:Q9LQT8 DIP:DIP-32985N IntAct:Q9LQT8
STRING:Q9LQT8 EnsemblPlants:AT1G14920.1 GeneID:838057
KEGG:ath:AT1G14920 GeneFarm:4235 TAIR:At1g14920 eggNOG:NOG243696
HOGENOM:HOG000238577 InParanoid:Q9LQT8 KO:K14494 OMA:RRVYRFR
PhylomeDB:Q9LQT8 ProtClustDB:CLSN2682993 EvolutionaryTrace:Q9LQT8
Genevestigator:Q9LQT8 GermOnline:AT1G14920 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 Uniprot:Q9LQT8
Length = 533
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 112/390 (28%), Positives = 186/390 (47%)
Query: 36 EEESKDVELVHLLILCAEKIGSQQFDRASTLLDHCENFS-SKIGNSVERVVHYFVKALQE 94
+ + V LVH L+ CAE + + A L+ + S+IG ++ +V YF +AL
Sbjct: 161 DSQENGVRLVHALLACAEAVQKENLTVAEALVKQIGFLAVSQIG-AMRKVATYFAEALAR 219
Query: 95 RFNRETGKITSKRVKGEEIQLLQPEETIL--SLRPAL-VACYKESSFYQATLFAGTQAII 151
R R L P ++ + SL L + Y+ + + F QAI+
Sbjct: 220 RIYR-----------------LSPSQSPIDHSLSDTLQMHFYETCPYLKFAHFTANQAIL 262
Query: 152 ERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRME---ETG 208
E KR+H+ID ++ G LMQALA R P + ++T +G + + E G
Sbjct: 263 EAFQGKKRVHVIDFSMSQGLQWPALMQALALRPGGP-PVFRLTGIGPPAPDNFDYLHEVG 321
Query: 209 KRLAYFAETWNLPFSFKIVLVTETKDLNEDKFDLNAGE--AVAVYSPI----LLSRTRHP 262
+LA+ AE ++ F ++ + DL+ +L E +VAV S LL R
Sbjct: 322 CKLAHLAEAIHVEFEYRGFVANTLADLDASMLELRPSEIESVAVNSVFELHKLLGRPGAI 381
Query: 263 DFLIKMLRKISPCVMVIIEVEANHNSQNFEDRFFEVLFHYSASFDCLKVSMARCDPERVT 322
D ++ ++ +I P + ++E E+NHNS F DRF E L +YS FD L+ + D
Sbjct: 382 DKVLGVVNQIKPEIFTVVEQESNHNSPIFLDRFTESLHYYSTLFDSLEGVPSGQDK---V 438
Query: 323 FEEMYLGQHIRNIIATEGEERIFRHMKIDAWRKFFHRFGMVEAELSTSSLFQAELVIKNF 382
E+YLG+ I N++A +G +R+ RH + WR F G A + +++ QA +++ F
Sbjct: 439 MSEVYLGKQICNVVACDGPDRVERHETLSQWRNRFGSAGFAAAHIGSNAFKQASMLLALF 498
Query: 383 AFASYLTLDRNGQCLIVGWKGSPQLSLSVW 412
++ + CL++GW P ++ S W
Sbjct: 499 NGGEGYRVEESDGCLMLGWHTRPLIATSAW 528
>TAIR|locus:2008086 [details] [associations]
symbol:SCL3 "AT1G50420" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
GO:GO:0009739 EMBL:AC012561 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY056154 EMBL:AY091260 EMBL:AF036301
IPI:IPI00539428 PIR:E96540 PIR:T51235 RefSeq:NP_175459.1
UniGene:At.14826 IntAct:Q9LPR8 STRING:Q9LPR8
EnsemblPlants:AT1G50420.1 GeneID:841464 KEGG:ath:AT1G50420
GeneFarm:4258 TAIR:At1g50420 eggNOG:NOG310008 InParanoid:Q9LPR8
OMA:MVHVIDL PhylomeDB:Q9LPR8 ProtClustDB:CLSN2913643
Genevestigator:Q9LPR8 Uniprot:Q9LPR8
Length = 482
Score = 251 (93.4 bits), Expect = 1.7e-36, Sum P(2) = 1.7e-36
Identities = 51/161 (31%), Positives = 85/161 (52%)
Query: 252 SPILLSRTRHPDFLIKMLRKISPCVMVIIEVEANHNSQNFEDRFFEVLFHYSASFDCLKV 311
S + L + D + + +SP VMV+ E +++HN +R E L+ Y+A FDCL+
Sbjct: 319 SSLPLPSSGRTDSFLNAIWGLSPKVMVVTEQDSDHNGSTLMERLLESLYTYAALFDCLET 378
Query: 312 SMARCDPERVTFEEMYLGQHIRNIIATEGEERIFRHMKIDAWRKFFHRFGMVEAELSTSS 371
+ R +R+ E+M G+ I+NII+ EG ER RH K++ W + G LS +
Sbjct: 379 KVPRTSQDRIKVEKMLFGEEIKNIISCEGFERRERHEKLEKWSQRIDLAGFGNVPLSYYA 438
Query: 372 LFQAELVIKNFAFASYLTLDRNGQCLIVGWKGSPQLSLSVW 412
+ QA +++ F Y + +G C ++ W+ P S+S W
Sbjct: 439 MLQARRLLQGCGFDGYRIKEESG-CAVICWQDRPLYSVSAW 478
Score = 203 (76.5 bits), Expect = 1.7e-36, Sum P(2) = 1.7e-36
Identities = 60/219 (27%), Positives = 105/219 (47%)
Query: 38 ESKDVELVHLLILCAEKIGSQQFDRASTLLDHCENFSSKIGNSVERVVHYFVKALQERFN 97
E + + L+HLL+ CA + S A+ L+ + +S G++++R+ YF +AL R
Sbjct: 48 EERGLYLIHLLLTCANHVASGSLQNANAALEQLSHLASPDGDTMQRIAAYFTEALANRIL 107
Query: 98 RETGKITSKRVKGEEIQLLQPEETILSLRPALVACYKESSFYQATLFAGTQAIIERVASA 157
+ + K + + + E I R ++ + + +AI+E +
Sbjct: 108 KSWPGLY-KALNATQTRTNNVSEEIHVRR----LFFEMFPILKVSYLLTNRAILEAMEGE 162
Query: 158 KRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAET 217
K +H+IDL + + L+QA +R E P L +IT V K+ +E+ RL AE
Sbjct: 163 KMVHVIDLDASEPAQWLALLQAFNSRPEGPPHL-RITGV-HHQKEVLEQMAHRLIEEAEK 220
Query: 218 WNLPFSFKIVLVTETKDLNEDKFDLNAGEAVAVYSPILL 256
++PF F V V+ LN ++ + GEA+AV S + L
Sbjct: 221 LDIPFQFNPV-VSRLDCLNVEQLRVKTGEALAVSSVLQL 258
>TAIR|locus:2005516 [details] [associations]
symbol:RGA1 "REPRESSOR OF GA1-3 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IDA;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0009740
"gibberellic acid mediated signaling pathway" evidence=RCA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009723 "response to ethylene
stimulus" evidence=IGI;RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=IGI;RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=IGI;RCA] [GO:0010029 "regulation of seed
germination" evidence=IGI] [GO:2000033 "regulation of seed dormancy
process" evidence=IGI] [GO:0010187 "negative regulation of seed
germination" evidence=IGI] [GO:0010218 "response to far red light"
evidence=IEP] [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IGI] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0042176
"regulation of protein catabolic process" evidence=IMP] [GO:0006096
"glycolysis" evidence=RCA] [GO:0006833 "water transport"
evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009266
"response to temperature stimulus" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0046686
"response to cadmium ion" evidence=RCA] [GO:0048444 "floral organ
morphogenesis" evidence=RCA] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IGI]
Pfam:PF03514 GO:GO:0007275 GO:GO:0009737 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009723 GO:GO:0003700
GO:GO:0006351 GO:GO:0010218 GO:GO:0010187 GO:GO:0042176
GO:GO:0042538 EMBL:AC005560 GO:GO:2000377 GO:GO:0040029
GO:GO:0009867 GO:GO:0009740 eggNOG:NOG243696 HOGENOM:HOG000238577
KO:K14494 ProtClustDB:CLSN2682993 GO:GO:0009938 GO:GO:2000033
InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
EMBL:Y11336 EMBL:Y15194 EMBL:AY052239 EMBL:AY054160 EMBL:BT010467
IPI:IPI00523272 PIR:D84426 RefSeq:NP_178266.1 UniGene:At.24012
ProteinModelPortal:Q9SLH3 SMR:Q9SLH3 IntAct:Q9SLH3 STRING:Q9SLH3
PRIDE:Q9SLH3 EnsemblPlants:AT2G01570.1 GeneID:814686
KEGG:ath:AT2G01570 GeneFarm:4238 TAIR:At2g01570 InParanoid:Q9SLH3
OMA:VHALMAC PhylomeDB:Q9SLH3 Genevestigator:Q9SLH3
GermOnline:AT2G01570 Uniprot:Q9SLH3
Length = 587
Score = 394 (143.8 bits), Expect = 2.0e-36, P = 2.0e-36
Identities = 116/395 (29%), Positives = 186/395 (47%)
Query: 30 SAINISEEESKDVELVHLLILCAEKIGSQQFDRASTLLDHCENFSSKIGNSVERVVHYFV 89
S I + +E+ V LVH L+ CAE I A L+ + ++ +V YF
Sbjct: 208 SVILVDSQEN-GVRLVHALMACAEAIQQNNLTLAEALVKQIGCLAVSQAGAMRKVATYFA 266
Query: 90 KALQERFNRETGKITSKRVKGEEIQLLQPEETI-LSLRPAL-VACYKESSFYQATLFAGT 147
+AL R R L P+ I L L + Y+ + + F
Sbjct: 267 EALARRIYR----------------LSPPQNQIDHCLSDTLQMHFYETCPYLKFAHFTAN 310
Query: 148 QAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGS---SSKQRM 204
QAI+E KR+H+ID ++ G LMQALA R+ P ++T +G + +
Sbjct: 311 QAILEAFEGKKRVHVIDFSMNQGLQWPALMQALALREGGP-PTFRLTGIGPPAPDNSDHL 369
Query: 205 EETGKRLAYFAETWNLPFSFKIVLVTETKDLNEDKFDLNAG--EAVAVYSPI----LLSR 258
E G +LA AE ++ F ++ + DL+ +L EAVAV S LL R
Sbjct: 370 HEVGCKLAQLAEAIHVEFEYRGFVANSLADLDASMLELRPSDTEAVAVNSVFELHKLLGR 429
Query: 259 TRHPDFLIKMLRKISPCVMVIIEVEANHNSQNFEDRFFEVLFHYSASFDCLKVSMARCDP 318
+ ++ ++++I P + ++E E+NHN F DRF E L +YS FD L+ +
Sbjct: 430 PGGIEKVLGVVKQIKPVIFTVVEQESNHNGPVFLDRFTESLHYYSTLFDSLE-GVPNSQ- 487
Query: 319 ERVTFEEMYLGQHIRNIIATEGEERIFRHMKIDAWRKFFHRFGMVEAELSTSSLFQAELV 378
++V E+YLG+ I N++A EG +R+ RH + W F G+ A L +++ QA ++
Sbjct: 488 DKV-MSEVYLGKQICNLVACEGPDRVERHETLSQWGNRFGSSGLAPAHLGSNAFKQASML 546
Query: 379 IKNF-AFASYLTLDRNGQCLIVGWKGSPQLSLSVW 412
+ F + Y + NG CL++GW P ++ S W
Sbjct: 547 LSVFNSGQGYRVEESNG-CLMLGWHTRPLITTSAW 580
>TAIR|locus:2165685 [details] [associations]
symbol:AT5G41920 "AT5G41920" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB017067
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:BT029760 IPI:IPI00535918 RefSeq:NP_199007.1 UniGene:At.67848
UniGene:At.72727 IntAct:Q9FHZ1 DNASU:834197
EnsemblPlants:AT5G41920.1 GeneID:834197 KEGG:ath:AT5G41920
GeneFarm:4246 TAIR:At5g41920 eggNOG:NOG72098 InParanoid:Q9FHZ1
OMA:PWKGYTL PhylomeDB:Q9FHZ1 ProtClustDB:CLSN2686419
Genevestigator:Q9FHZ1 Uniprot:Q9FHZ1
Length = 405
Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
Identities = 116/374 (31%), Positives = 180/374 (48%)
Query: 42 VELVHLLILCAEKIGSQQFDRASTLLDHCENFSSKIGNSVERVVHYFVKALQERFNRETG 101
++L+ LL+ CAE + + ASTLL S G+S ERVV YF +ALQ R
Sbjct: 38 IKLLSLLLQCAEYVATDHLREASTLLSEISEICSPFGSSPERVVAYFAQALQTRVISSYL 97
Query: 102 KITSKRVKGEEIQLLQPEETILSLRPALVACYKESSFYQATLFAGTQAIIERVASAKRIH 161
+ + + ++Q ++ I S AL S + + F QAI + + +H
Sbjct: 98 SGACSPLSEKPLTVVQSQK-IFS---ALQTYNSVSPLIKFSHFTANQAIFQALDGEDSVH 153
Query: 162 LIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP 221
+IDL + G L LA+R + ++IT GSSS + TG+RLA FA + NLP
Sbjct: 154 IIDLDVMQGLQWPALFHILASRPR-KLRSIRITGFGSSS-DLLASTGRRLADFASSLNLP 211
Query: 222 FSFKIVLVTETKDLNEDKFDLNAGEAVAVY--SPILLSRTRHPDFLIKMLRKISPCVMVI 279
F F + ++ + GEAV V+ L T + +++LR++ P ++ +
Sbjct: 212 FEFHPIEGIIGNLIDPSQLATRQGEAVVVHWMQHRLYDVTGNNLETLEILRRLKPNLITV 271
Query: 280 IEVEANHNSQ-NFEDRFFEVLFHYSASFDCLKVSMARCDPERVTFEEMYLGQHIRNIIAT 338
+E E +++ +F RF E L +YSA FD L + ER T E++ LG IRNI+A
Sbjct: 272 VEQELSYDDGGSFLGRFVEALHYYSALFDALGDGLGEESGERFTVEQIVLGTEIRNIVAH 331
Query: 339 EGEERIFRHMKIDAWRKFFHRFGMVEAELSTSSLFQAELVIKNFAFASYLTLDRNGQCLI 398
G R + MK W++ R G L + QA L++ + Y ++ NG L
Sbjct: 332 GGGRR--KRMK---WKEELSRVGFRPVSLRGNPATQAGLLLGMLPWNGYTLVEENGT-LR 385
Query: 399 VGWKGSPQLSLSVW 412
+GWK L+ S W
Sbjct: 386 LGWKDLSLLTASAW 399
>TAIR|locus:2020487 [details] [associations]
symbol:LAS "AT1G55580" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010223 "secondary shoot formation" evidence=IMP]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC002328 GO:GO:0010223
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG323432 EMBL:AY196482 EMBL:BT026519 EMBL:EF598379
EMBL:EF598380 EMBL:EF598381 EMBL:EF598382 EMBL:EF598383
EMBL:EF598384 EMBL:EF598385 EMBL:EF598386 EMBL:EF598387
EMBL:EF598388 EMBL:EF598389 EMBL:EF598390 EMBL:EF598391
EMBL:EF598392 EMBL:EF598393 EMBL:EF598394 EMBL:EF598395
EMBL:EF598396 EMBL:EF598397 EMBL:EF598398 EMBL:EF598399
EMBL:EF598400 EMBL:EF598401 EMBL:EF598402 IPI:IPI00532485
RefSeq:NP_175954.1 UniGene:At.45199 STRING:Q9ZWC5
EnsemblPlants:AT1G55580.1 GeneID:842007 KEGG:ath:AT1G55580
GeneFarm:4247 TAIR:At1g55580 InParanoid:Q9ZWC5 OMA:EREANHG
PhylomeDB:Q9ZWC5 ProtClustDB:CLSN2682663 Genevestigator:Q9ZWC5
Uniprot:Q9ZWC5
Length = 445
Score = 304 (112.1 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 85/283 (30%), Positives = 139/283 (49%)
Query: 148 QAIIERVASAKR--IHLIDLAIRSGSHCIVLMQALATRQE---CPVELLKITAVGSSSKQ 202
QAI++ + +H++DL I G LMQALA R P L+IT G
Sbjct: 165 QAILDATETNDNGALHILDLDISQGLQWPPLMQALAERSSNPSSPPPSLRITGCGRDVTG 224
Query: 203 RMEETGKRLAYFAETWNLPFSFKIVLVTETKDL-----NEDKFDLNA--GEAVAVYSPIL 255
+ TG RL FA++ L F F +++ E +DL L+A GE +AV
Sbjct: 225 -LNRTGDRLTRFADSLGLQFQFHTLVIVE-EDLAGLLLQIRLLALSAVQGETIAVNCVHF 282
Query: 256 LSRTRHPD-----FLIKMLRKISPCVMVIIEVEANHNSQNFEDRFFEVLFHYSASFDCLK 310
L + + D + ++ ++ ++ + E EANH +F +RF E + HY A FD L+
Sbjct: 283 LHKIFNDDGDMIGHFLSAIKSLNSRIVTMAEREANHGDHSFLNRFSEAVDHYMAIFDSLE 342
Query: 311 VSMARCDPERVTFEEMYLGQHIRNIIATEGEERIFRHMKIDAWRKFFHRFGMVEAELSTS 370
++ ER+T E+ + G+ I +++A E ER RH + + W + RFG V + +
Sbjct: 343 ATLPPNSRERLTLEQRWFGKEILDVVAAEETERKQRHRRFEIWEEMMKRFGFVNVPIGSF 402
Query: 371 SLFQAELVIK-NFAFASYLTLDRNGQCLIVGWKGSPQLSLSVW 412
+L QA+L+++ ++ Y L L +GW+ P S+S W
Sbjct: 403 ALSQAKLLLRLHYPSEGY-NLQFLNNSLFLGWQNRPLFSVSSW 444
Score = 94 (38.1 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 27/74 (36%), Positives = 33/74 (44%)
Query: 35 SEEESKDVELVHLLILCAEKIGSQQFDRASTLLDHCENFSSKIGNSVERVVHYFVKALQE 94
S S L LL A + F A LL SS G+S ER+VH F KAL
Sbjct: 32 SAATSASHHLRRLLFTAANFVSQSNFTAAQNLLSILSLNSSPHGDSTERLVHLFTKALSV 91
Query: 95 RFNRETGKITSKRV 108
R NR+ T++ V
Sbjct: 92 RINRQQQDQTAETV 105
>TAIR|locus:2148293 [details] [associations]
symbol:AT5G59450 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010200 "response to chitin" evidence=IEP;RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AB025604
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY035001 EMBL:AY062942
EMBL:AF036307 IPI:IPI00541926 PIR:T51233 RefSeq:NP_200753.1
UniGene:At.29225 UniGene:At.63919 UniGene:At.72775 STRING:Q9LTI5
EnsemblPlants:AT5G59450.1 GeneID:836064 KEGG:ath:AT5G59450
GeneFarm:4255 TAIR:At5g59450 eggNOG:NOG254902 HOGENOM:HOG000238576
InParanoid:Q9LTI5 OMA:KPATISK PhylomeDB:Q9LTI5
ProtClustDB:CLSN2685117 Genevestigator:Q9LTI5 Uniprot:Q9LTI5
Length = 610
Score = 355 (130.0 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 108/399 (27%), Positives = 178/399 (44%)
Query: 29 GSAINISEEESKDVELVHLLILCAEKIGSQQFDRASTLLDHCENFSSKIGNSVERVVHYF 88
GS+ ++ V+L LL CA+ + S RA+ L SS G+ +R+ YF
Sbjct: 209 GSSNKSKTHKTNTVDLRSLLTQCAQAVASFDQRRATDKLKEIRAHSSSNGDGTQRLAFYF 268
Query: 89 VKALQERFNRETGKITSKRVKGEEIQLLQPEETILSLRPALVACYKESSFYQATLFAGTQ 148
+AL+ R TG I S V +++ + A Y FA +
Sbjct: 269 AEALEARI---TGNI-SPPVSNP---FPSSTTSMVDILKAYKLFVHTCPIYVTDYFAANK 321
Query: 149 AIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAV-----GSSSKQR 203
+I E A ++H++D + G L++AL+ R P +L++T + G R
Sbjct: 322 SIYELAMKATKLHIVDFGVLYGFQWPCLLRALSKRPGGP-PMLRVTGIELPQAGFRPSDR 380
Query: 204 MEETGKRLAYFAETWNLPFSFKIVLVTETKDLNEDKFDLNAGEAVAV-------YSPILL 256
+EETG+RL F + +N+PF F + + + + D+ +N GE V Y+P
Sbjct: 381 VEETGRRLKRFCDQFNVPFEFNFI-AKKWETITLDELMINPGETTVVNCIHRLQYTPDET 439
Query: 257 SRTRHP-DFLIKMLRKISPCVMVIIEVEANHNSQNFEDRFFEVLFHYSASFDCLKVSMAR 315
P D ++K+ R I+P + V E+ +NS F RF E LFHYS+ FD ++
Sbjct: 440 VSLDSPRDTVLKLFRDINPDLFVFAEINGMYNSPFFMTRFREALFHYSSLFDMFDTTIHA 499
Query: 316 CDP--ERVTFEEMYLGQHIRNIIATEGEERIFRHMKIDAWRKFFHRFGMVEAELSTSSLF 373
D R E L + ++I+ EG ER R WR R G A +S +
Sbjct: 500 EDEYKNRSLLERELLVRDAMSVISCEGAERFARPETYKQWRVRILRAGFKPATISKQIMK 559
Query: 374 QAELVIKNFAFASYLTLDRNGQCLIVGWKGSPQLSLSVW 412
+A+ +++ ++ +D + ++ GWKG + S W
Sbjct: 560 EAKEIVRKRYHRDFV-IDSDNNWMLQGWKGRVIYAFSCW 597
Score = 48 (22.0 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 31 AINISEEESKDVELVHLLILC 51
AI +SE E V+L H+L++C
Sbjct: 162 AIFVSEMEELAVKLEHVLLVC 182
>TAIR|locus:2075155 [details] [associations]
symbol:AT3G46600 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016671 "oxidoreductase
activity, acting on a sulfur group of donors, disulfide as
acceptor" evidence=IEA] [GO:0019538 "protein metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AL133314
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
ProtClustDB:CLSN2685117 EMBL:AK226419 EMBL:AY087418 IPI:IPI00537144
PIR:T45597 RefSeq:NP_190244.1 UniGene:At.595 STRING:Q9SNB8
EnsemblPlants:AT3G46600.1 GeneID:823813 KEGG:ath:AT3G46600
GeneFarm:4254 TAIR:At3g46600 eggNOG:NOG304481 InParanoid:Q9SNB8
OMA:FNESESQ PhylomeDB:Q9SNB8 Genevestigator:Q9SNB8 Uniprot:Q9SNB8
Length = 583
Score = 376 (137.4 bits), Expect = 2.3e-34, P = 2.3e-34
Identities = 108/399 (27%), Positives = 188/399 (47%)
Query: 29 GSAINISEEES-KDVELVHLLILCAEKIGSQQFDRASTLLDHCENFSSKIGNSVERVVHY 87
GS+ +++S + V++ +LL+ CA+ + S RA L SS+ G++ +R+ ++
Sbjct: 193 GSSNRYKQQKSDQPVDMRNLLMQCAQAVASFDQRRAFEKLKEIREHSSRHGDATQRLGYH 252
Query: 88 FVKALQERFNRE-TGKITSKRVKGEEIQLLQPEETILSLRPALVACYKESSFYQATLFAG 146
F +AL+ R T I++ + + +L+ + + P L+ CY F
Sbjct: 253 FAEALEARITGTMTTPISATSSRTSMVDILKAYKGFVQACPTLIMCY----------FTA 302
Query: 147 TQAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAV-----GSSSK 201
+ I E + A +H+ID I G L+QAL+ R P LL++T + G
Sbjct: 303 NRTINELASKATTLHIIDFGILYGFQWPCLIQALSKRDIGP-PLLRVTGIELPQSGFRPS 361
Query: 202 QRMEETGKRLAYFAETWNLPFSFKIVLVTETKDLNEDKFDLNAGEAVAV-------YSPI 254
+R+EETG+RL F + +N+PF + + +++ D +N+GE V Y+P
Sbjct: 362 ERVEETGRRLKRFCDKFNVPFEYSFI-AKNWENITLDDLVINSGETTVVNCILRLQYTPD 420
Query: 255 LLSRTRHP-DFLIKMLRKISPCVMVIIEVEANHNSQNFEDRFFEVLFHYSASFDCLKVSM 313
P D +K+ R I+P + V E+ +NS F RF E LFH S+ FD + ++
Sbjct: 421 ETVSLNSPRDTALKLFRDINPDLFVFAEINGTYNSPFFLTRFREALFHCSSLFDMYETTL 480
Query: 314 ARCDPERVTFEEMYLGQHIRNIIATEGEERIFRHMKIDAWRKFFHRFGMVEAELSTSSLF 373
+ D R E + + ++IA EG ER R W+ R G A+LS +
Sbjct: 481 SEDDNCRTLVERELIIRDAMSVIACEGSERFARPETYKQWQVRILRAGFRPAKLSKQIVK 540
Query: 374 QAELVIKNFAFASYLTLDRNGQCLIVGWKGSPQLSLSVW 412
+ ++K ++ +D + + GWKG ++S W
Sbjct: 541 DGKEIVKERYHKDFV-IDNDNHWMFQGWKGRVLYAVSCW 578
>TAIR|locus:2080345 [details] [associations]
symbol:SCR "SCARECROW" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009630
"gravitropism" evidence=IMP] [GO:0009956 "radial pattern formation"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0051457 "maintenance of protein location in
nucleus" evidence=IMP] [GO:0008356 "asymmetric cell division"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
GO:GO:0009630 GO:GO:0008356 GO:GO:0051457 EMBL:AL132957
GO:GO:0010103 GO:GO:0009956 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:U62798 EMBL:AY056315 EMBL:AY080840
EMBL:AY113991 IPI:IPI00524888 PIR:T47581 PIR:T51244
RefSeq:NP_190990.1 UniGene:At.71814 UniGene:At.932 IntAct:Q9M384
STRING:Q9M384 EnsemblPlants:AT3G54220.1 GeneID:824589
KEGG:ath:AT3G54220 GeneFarm:4242 TAIR:At3g54220 eggNOG:NOG311437
InParanoid:Q9M384 OMA:QERENSS PhylomeDB:Q9M384
ProtClustDB:CLSN2915643 Genevestigator:Q9M384 Uniprot:Q9M384
Length = 653
Score = 375 (137.1 bits), Expect = 5.8e-34, P = 5.8e-34
Identities = 110/384 (28%), Positives = 184/384 (47%)
Query: 32 INISEEESKDVELVHLLILCAEKIGSQQFDRASTLLDHCENFSSKIGNSVERVVHYFVKA 91
I +++ + + L+ LL+ CAE + + + A+ LL S+ G S +RV YF +A
Sbjct: 278 IKRQKQDEEGLHLLTLLLQCAEAVSADNLEEANKLLLEISQLSTPYGTSAQRVAAYFSEA 337
Query: 92 LQERF-NRETGKITSKRVKGEEIQLLQPEETILSLRPALVACYKESSFYQATLFAGTQAI 150
+ R N G + + P+ L + A S + + F QAI
Sbjct: 338 MSARLLNSCLGIYAALPSRW------MPQTHSLKMVSAFQVFNGISPLVKFSHFTANQAI 391
Query: 151 IERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKR 210
E +H+IDL I G L LA+R P + ++T +G+S + ++ TGKR
Sbjct: 392 QEAFEKEDSVHIIDLDIMQGLQWPGLFHILASRPGGPPHV-RLTGLGTSM-EALQATGKR 449
Query: 211 LAYFAETWNLPFSFKIVLVTETKDLNEDKFDLNAGEAVAVY--SPILLSRTRHPDFLIKM 268
L+ FA+ LPF F L + +L+ ++ ++ EAVAV+ L T + +
Sbjct: 450 LSDFADKLGLPFEF-CPLAEKVGNLDTERLNVRKREAVAVHWLQHSLYDVTGSDAHTLWL 508
Query: 269 LRKISPCVMVIIEVEANHNSQNFEDRFFEVLFHYSASFDCLKVSMARCDPERVTFEEMYL 328
L++++P V+ ++E + +H + +F RF E + +YSA FD L S ER E+ L
Sbjct: 509 LQRLAPKVVTVVEQDLSH-AGSFLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLL 567
Query: 329 GQHIRNIIATEGEERIFRHMKIDAWRKFFHRFGMVEAELSTSSLFQAELVIKNFAFASYL 388
+ IRN++A G R +K ++WR+ + G L+ ++ QA L++ F Y
Sbjct: 568 SKEIRNVLAVGGPSRS-GEVKFESWREKMQQCGFKGISLAGNAATQATLLLGMFPSDGYT 626
Query: 389 TLDRNGQCLIVGWKGSPQLSLSVW 412
+D NG L +GWK L+ S W
Sbjct: 627 LVDDNGT-LKLGWKDLSLLTASAW 649
>TAIR|locus:2025032 [details] [associations]
symbol:AT1G07520 "AT1G07520" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006355 GO:GO:0006351 GO:GO:0010200 EMBL:AC022464
InterPro:IPR005202 PROSITE:PS50985 PIR:T51232 eggNOG:NOG319005
EMBL:AB493440 EMBL:BX839686 IPI:IPI00525480 IPI:IPI01019456
RefSeq:NP_172232.1 UniGene:At.63938 UniGene:At.71785 STRING:Q3EDH0
PRIDE:Q3EDH0 GeneID:837266 KEGG:ath:AT1G07520 GeneFarm:4253
TAIR:At1g07520 InParanoid:Q3EDH0 OMA:VRIENEV Genevestigator:Q3EDH0
Uniprot:Q3EDH0
Length = 695
Score = 369 (135.0 bits), Expect = 3.4e-33, P = 3.4e-33
Identities = 101/396 (25%), Positives = 184/396 (46%)
Query: 35 SEEESKDVELVHLLILCAEKIGSQQFDRASTLLDHCENFSSKIGNSVERVVHYFVKALQE 94
++++S+ V+ LL LCA+ + + A LL S +G++ +R+ H+F AL+
Sbjct: 306 AKKKSRAVDFRTLLTLCAQSVSAGDKITADDLLRQIRKQCSPVGDASQRLAHFFANALEA 365
Query: 95 RFNRETGKITSKRVKGEEIQLLQPEETILSLRPALVACYKESSFYQATLFAGTQAIIERV 154
R TG + ++ + + T + + S F F + I++
Sbjct: 366 RLEGSTGTM----IQSYYDSISSKKRTAAQILKSYSVFLSASPFMTLIYFFSNKMILDAA 421
Query: 155 ASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAV-----GSSSKQRMEETGK 209
A +H++D I G + +Q L+ + + L+IT + G +R+++TG+
Sbjct: 422 KDASVLHIVDFGILYGFQWPMFIQHLS-KSNPGLRKLRITGIEIPQHGLRPTERIQDTGR 480
Query: 210 RLAYFAETWNLPFSFKIVLVTETKDLNEDKFDLNAGEAVAVYSPILLSRTRH--P----- 262
RL + + + +PF + + + + ++F + E +AV + + R P
Sbjct: 481 RLTEYCKRFGVPFEYNAIASKNWETIKMEEFKIRPNEVLAVNAVLRFKNLRDVIPGEEDC 540
Query: 263 --DFLIKMLRKISPCVMVIIEVEANHNSQNFEDRFFEVLFHYSASFDCLKVSMARCDPER 320
D +K++R ++P V + V + N+ F RF E LFHYSA FD ++++ +PER
Sbjct: 541 PRDGFLKLIRDMNPNVFLSSTVNGSFNAPFFTTRFKEALFHYSALFDLFGATLSKENPER 600
Query: 321 VTFEEMYLGQHIRNIIATEGEERIFRHMKIDAWRKFFHRFGM----VEAELSTSSLFQAE 376
+ FE + G+ + N+IA EG +R+ R W+ R G VEAEL LF+ +
Sbjct: 601 IHFEGEFYGREVMNVIACEGVDRVERPETYKQWQVRMIRAGFKQKPVEAELV--QLFREK 658
Query: 377 LVIKNFAFASYLTLDRNGQCLIVGWKGSPQLSLSVW 412
+ K + + LD + + GWKG S S W
Sbjct: 659 M--KKWGYHKDFVLDEDSNWFLQGWKGRILFSSSCW 692
>TAIR|locus:2008076 [details] [associations]
symbol:SCL5 "AT1G50600" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC079279 EMBL:AC012561
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG287245 EMBL:AY034929 EMBL:AY039611 EMBL:BT000883
EMBL:AF036302 IPI:IPI00519165 PIR:E96542 PIR:T51236
RefSeq:NP_175475.2 UniGene:At.14827 STRING:Q8H125 PaxDb:Q8H125
PRIDE:Q8H125 EnsemblPlants:AT1G50600.1 GeneID:841482
KEGG:ath:AT1G50600 GeneFarm:4229 TAIR:At1g50600 InParanoid:Q8H125
OMA:REERHEP PhylomeDB:Q8H125 ProtClustDB:CLSN2918355
ArrayExpress:Q8H125 Genevestigator:Q8H125 Uniprot:Q8H125
Length = 597
Score = 359 (131.4 bits), Expect = 2.2e-32, P = 2.2e-32
Identities = 114/401 (28%), Positives = 192/401 (47%)
Query: 25 HFCGGSAINISEEESKDVELVHLLILCAEKIGSQQFDRASTLLDHCENFSSKIGNSVERV 84
H SA+ S E +L +L CA+ + + + L+ + S G V+R+
Sbjct: 208 HGVVSSAMYRSMEMISRGDLKGVLYECAKAVENYDLEMTDWLISQLQQMVSVSGEPVQRL 267
Query: 85 VHYFVKALQERFNRETGKITSKRVKGEEIQLLQPEETILSLRPALVACYKESSFYQATLF 144
Y ++ L R +G K ++ ++ PE +L+ L Y+ +++
Sbjct: 268 GAYMLEGLVARL-ASSGSSIYKALRCKDPT--GPE--LLTYMHIL---YEACPYFKFGYE 319
Query: 145 AGTQAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGS--SSKQ 202
+ AI E V + +H+ID I G + L++AL R P + +IT + SS
Sbjct: 320 SANGAIAEAVKNESFVHIIDFQISQGGQWVSLIRALGARPGGPPNV-RITGIDDPRSSFA 378
Query: 203 R---MEETGKRLAYFAETWNLPFSFKIVLVTETKDLNEDKFDLNAGEAVAVYSPILL--- 256
R +E G+RL AE +PF F + T ++ +K + GEA+AV P++L
Sbjct: 379 RQGGLELVGQRLGKLAEMCGVPFEFHGAALCCT-EVEIEKLGVRNGEALAVNFPLVLHHM 437
Query: 257 ---SRT--RHPDFLIKMLRKISPCVMVIIEVEANHNSQNFEDRFFEVLFHYSASFDCLKV 311
S T H D L+++++ +SP V+ ++E EAN N+ F RF E + HY A F+ + V
Sbjct: 438 PDESVTVENHRDRLLRLVKHLSPNVVTLVEQEANTNTAPFLPRFVETMNHYLAVFESIDV 497
Query: 312 SMARCDPERVTFEEMYLGQHIRNIIATEGEERIFRHMKIDAWRKFFHRFGMVEAELSTSS 371
+AR ER+ E+ L + + N+IA EG ER RH + WR FH G LS+
Sbjct: 498 KLARDHKERINVEQHCLAREVVNLIACEGVEREERHEPLGKWRSRFHMAGFKPYPLSSYV 557
Query: 372 LFQAELVIKNFAFASYLTLDRNGQCLIVGWKGSPQLSLSVW 412
+ ++++++ Y +R+G L +GWK P ++ W
Sbjct: 558 NATIKGLLESYS-EKYTLEERDG-ALYLGWKNQPLITSCAW 596
>TAIR|locus:2164783 [details] [associations]
symbol:PAT1 "AT5G48150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0009640 "photomorphogenesis"
evidence=IMP] Pfam:PF03514 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0009640
GO:GO:0004871 EMBL:AB023039 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF153443 EMBL:BT025326 EMBL:AK117483
IPI:IPI00517897 RefSeq:NP_199626.1 RefSeq:NP_974903.1
UniGene:At.7076 PRIDE:Q9LDL7 EnsemblPlants:AT5G48150.1
EnsemblPlants:AT5G48150.2 GeneID:834867 KEGG:ath:AT5G48150
GeneFarm:4233 TAIR:At5g48150 eggNOG:NOG287245 InParanoid:Q9LDL7
OMA:NSAHARG PhylomeDB:Q9LDL7 ProtClustDB:CLSN2686580
Genevestigator:Q9LDL7 Uniprot:Q9LDL7
Length = 490
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 101/379 (26%), Positives = 183/379 (48%)
Query: 48 LILCAEKIGSQQFDRASTLLDHCENFSSKIGNSVERVVHYFVKALQERFNRETGKITSKR 107
L+ CA+ + A ++++ S G ++R+ Y ++ L + +G K
Sbjct: 123 LVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQL-ASSGSSIYKA 181
Query: 108 VKGEEIQLLQPEET-ILSLRPALVACYKESSFYQATLFAGTQAIIERVASAKRIHLIDLA 166
+ + +P T +LS L Y+ +++ + AI E + R+H+ID
Sbjct: 182 LN----RCPEPASTELLSYMHIL---YEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQ 234
Query: 167 IRSGSHCIVLMQALATRQECPVELLKITAVG--SSSKQR---MEETGKRLAYFAETWNLP 221
I GS + L+QA A R P + +IT + +S+ R + G RLA A+ +N+P
Sbjct: 235 IGQGSQWVTLIQAFAARPGGPPRI-RITGIDDMTSAYARGGGLSIVGNRLAKLAKQFNVP 293
Query: 222 FSFKIVLVTETKDLNEDKFDLNAGEAVAV-YSPIL-------LSRTRHPDFLIKMLRKIS 273
F F V V+ ++ + GEA+AV ++ +L +S H D L++M++ +S
Sbjct: 294 FEFNSVSVS-VSEVKPKNLGVRPGEALAVNFAFVLHHMPDESVSTENHRDRLLRMVKSLS 352
Query: 274 PCVMVIIEVEANHNSQNFEDRFFEVLFHYSASFDCLKVSMARCDPERVTFEEMYLGQHIR 333
P V+ ++E E+N N+ F RF E + +Y+A F+ + V++ R +R+ E+ L + +
Sbjct: 353 PKVVTLVEQESNTNTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVV 412
Query: 334 NIIATEGEERIFRHMKIDAWRKFFHRFGMVEAELSTSSLFQAELVIKNFAFASYLTLDRN 393
NIIA EG +R+ RH + WR F G LS + +++N++ Y +R+
Sbjct: 413 NIIACEGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNYS-DKYRLEERD 471
Query: 394 GQCLIVGWKGSPQLSLSVW 412
G L +GW ++ W
Sbjct: 472 G-ALYLGWMHRDLVASCAW 489
>TAIR|locus:2015243 [details] [associations]
symbol:AT1G63100 "AT1G63100" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0000226 "microtubule cytoskeleton organization"
evidence=RCA] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA] [GO:0048451 "petal formation" evidence=RCA]
[GO:0048453 "sepal formation" evidence=RCA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700
GO:GO:0006351 EMBL:AC010795 InterPro:IPR005202 PROSITE:PS50985
IPI:IPI00520577 PIR:D96656 RefSeq:NP_176498.1 UniGene:At.66082
ProteinModelPortal:Q9CAN3 SMR:Q9CAN3 PRIDE:Q9CAN3
EnsemblPlants:AT1G63100.1 GeneID:842613 KEGG:ath:AT1G63100
GeneFarm:4261 TAIR:At1g63100 eggNOG:NOG286854 HOGENOM:HOG000241666
InParanoid:Q9CAN3 OMA:RTKCENE PhylomeDB:Q9CAN3
ProtClustDB:CLSN2682380 Genevestigator:Q9CAN3 Uniprot:Q9CAN3
Length = 658
Score = 347 (127.2 bits), Expect = 7.0e-31, P = 7.0e-31
Identities = 111/400 (27%), Positives = 187/400 (46%)
Query: 33 NISEEESKDVELVHLLILCAEKIGSQQFDRASTLLDHCENFSSKIGNS-VERVVHYFVKA 91
N + +D ELV+LL C + I S+ + + + +S G + + R++ Y+++A
Sbjct: 263 NNRNDLQRDFELVNLLTGCLDAIRSRNIAAINHFIARTGDLASPRGRTPMTRLIAYYIEA 322
Query: 92 LQERFNRETGKITSKRVKGEEIQLLQPEETILSLRPALVACYKESSFYQATLFAGTQAII 151
L R R I E + ++ +E+ +LR L F F + ++
Sbjct: 323 LALRVARMWPHIFHIAPPREFDRTVE-DESGNALR-FLNQVTPIPKFIH---FTANEMLL 377
Query: 152 ERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRL 211
+R+H+ID I+ G Q+LA+R P ++IT +G S K + ETG RL
Sbjct: 378 RAFEGKERVHIIDFDIKQGLQWPSFFQSLASRIN-PPHHVRITGIGES-KLELNETGDRL 435
Query: 212 AYFAETWNLPFSFKIVLVTETKDLNEDKFDLNAGEAVAVYSPILLSRTRHP-------DF 264
FAE NL F F V V +D+ + GE+VAV + + +T + DF
Sbjct: 436 HGFAEAMNLQFEFHPV-VDRLEDVRLWMLHVKEGESVAVNCVMQMHKTLYDGTGAAIRDF 494
Query: 265 LIKMLRKISPCVMVIIEVEANHNSQNFEDRFFEVLFHYSASFDCLKVSMARCDPERVTFE 324
L ++R +P +V+ E EA HNS+ E R L +YSA FD + ++A RV E
Sbjct: 495 L-GLIRSTNPIALVLAEQEAEHNSEQLETRVCNSLKYYSAMFDAIHTNLATDSLMRVKVE 553
Query: 325 EMYLGQHIRNIIATEGEERIFRHMKIDAWRKFFHRFGMVEAELSTSSLFQAELVIKNFAF 384
EM G+ IRNI+A EG R RH+ WR+ + G +S + Q++++++ +
Sbjct: 554 EMLFGREIRNIVACEGSHRQERHVGFRHWRRMLEQLGFRSLGVSEREVLQSKMLLRMYGS 613
Query: 385 AS--YLTLDRN----------GQCLIVGWKGSPQLSLSVW 412
+ + ++R+ G + + W P ++S W
Sbjct: 614 DNEGFFNVERSDEDNGGEGGRGGGVTLRWSEQPLYTISAW 653
>TAIR|locus:2044973 [details] [associations]
symbol:SCL21 "AT2G04890" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003700 GO:GO:0006351 EMBL:AC006955 EMBL:AC007211
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:AF210732 EMBL:AK175210 EMBL:AK175990 EMBL:AK176099
EMBL:AK221099 EMBL:BT026455 IPI:IPI00534889 PIR:G84462
RefSeq:NP_178566.1 UniGene:At.48419 UniGene:At.71110 IntAct:Q9S7H5
EnsemblPlants:AT2G04890.1 GeneID:815036 KEGG:ath:AT2G04890
GeneFarm:4231 TAIR:At2g04890 eggNOG:NOG292869 InParanoid:Q9S7H5
OMA:HKERINI PhylomeDB:Q9S7H5 ProtClustDB:CLSN2912915
Genevestigator:Q9S7H5 Uniprot:Q9S7H5
Length = 413
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 105/381 (27%), Positives = 176/381 (46%)
Query: 41 DVELVHLLILCAEKIGSQQFDRASTLLDHCENFSSKIGNSVERVVHYFVKALQERFNRET 100
D++LV L+ CA+ + A + S G ++R+ Y ++ L R +
Sbjct: 49 DLKLV--LVACAKAVSENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVARL-AAS 105
Query: 101 GKITSKRVKGEEIQLLQPEE-TILSLRPALVACYKESSFYQATLFAGTQAIIERVASAKR 159
G K ++ E PE LS + ++ +++ + AI E + +R
Sbjct: 106 GSSIYKSLQSRE-----PESYEFLSY---VYVLHEVCPYFKFGYMSANGAIAEAMKDEER 157
Query: 160 IHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWN 219
IH+ID I GS I L+QA A R + +IT VG S + KRL A+ ++
Sbjct: 158 IHIIDFQIGQGSQWIALIQAFAARPGGAPNI-RITGVGDGSV--LVTVKKRLEKLAKKFD 214
Query: 220 LPFSFKIVLVTETKDLNEDKFDLNAGEAVAVYSPILL--------SRTRHPDFLIKMLRK 271
+PF F V + ++ + D+ GEA+ V +L S H D L++M++
Sbjct: 215 VPFRFNAVS-RPSCEVEVENLDVRDGEALGVNFAYMLHHLPDESVSMENHRDRLLRMVKS 273
Query: 272 ISPCVMVIIEVEANHNSQNFEDRFFEVLFHYSASFDCLKVSMARCDPERVTFEEMYLGQH 331
+SP V+ ++E E N N+ F RF E L +Y+A F+ + V + R ER+ E+ + +
Sbjct: 274 LSPKVVTLVEQECNTNTSPFLPRFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMARD 333
Query: 332 IRNIIATEGEERIFRHMKIDAWRKFFHRFGMVEAELSTSSLFQAELVIKNFAFASYLTLD 391
+ NIIA EG ERI RH + W+ F G LS+ ++++++ Y +
Sbjct: 334 VVNIIACEGAERIERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLRDYS-NGYAIEE 392
Query: 392 RNGQCLIVGWKGSPQLSLSVW 412
R+G L +GW +S W
Sbjct: 393 RDG-ALYLGWMDRILVSSCAW 412
>TAIR|locus:2040701 [details] [associations]
symbol:AT2G37650 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] EMBL:AC004684 Pfam:PF03514 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
eggNOG:NOG319005 EMBL:AF036306 IPI:IPI00536640 PIR:T02531
PIR:T51240 RefSeq:NP_181301.1 UniGene:At.26205 UniGene:At.66411
PaxDb:O80933 PRIDE:O80933 EnsemblPlants:AT2G37650.1 GeneID:818342
KEGG:ath:AT2G37650 GeneFarm:4256 TAIR:At2g37650 InParanoid:O80933
OMA:WERVERP PhylomeDB:O80933 ProtClustDB:CLSN2912903
Genevestigator:O80933 Uniprot:O80933
Length = 718
Score = 341 (125.1 bits), Expect = 4.1e-30, P = 4.1e-30
Identities = 107/396 (27%), Positives = 183/396 (46%)
Query: 28 GGSAINISEEESKDVELVHLLILCAEKIGSQQFDRASTLLDHCENFSSKIGNSVERVVHY 87
GG N +E V+L LLI CA+ + + A LL S+ G+ +R+ H
Sbjct: 331 GGGGQNGKKEV---VDLRSLLIHCAQAVAADDRRCAGQLLKQIRLHSTPFGDGNQRLAHC 387
Query: 88 FVKALQERFNRETGKITSKRVKGEEIQLLQPEETILSLRPALVACYKESSFYQATLFAGT 147
F L+ R TG S+ KG + + +L +AC F + + F
Sbjct: 388 FANGLEARL-AGTG---SQIYKGI-VSKPRSAAAVLKAHQLFLAC---CPFRKLSYFITN 439
Query: 148 QAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVEL--LKITAVGSSSKQRME 205
+ I + V +++R+H+ID I G L+ + V + ++ G QR+E
Sbjct: 440 KTIRDLVGNSQRVHVIDFGILYGFQWPTLIHRFSMYGSPKVRITGIEFPQPGFRPAQRVE 499
Query: 206 ETGKRLAYFAETWNLPFSFKIVLVTETKDLNEDKFDLNAGEAVAVYSPILLSRTRHP--- 262
ETG+RLA +A+ + +PF +K + + + + D++ E + V + + + H
Sbjct: 500 ETGQRLAAYAKLFGVPFEYKAI-AKKWDAIQLEDLDIDRDE-ITVVNCLYRAENLHDESV 557
Query: 263 ------DFLIKMLRKISPCVMVIIEVEANHNSQNFEDRFFEVLFHYSASFDCLKVSMARC 316
D ++ ++ KI+P + V V +N+ F RF E LFH+S+ FD L+ + R
Sbjct: 558 KVESCRDTVLNLIGKINPDLFVFGIVNGAYNAPFFVTRFREALFHFSSIFDMLETIVPRE 617
Query: 317 DPERVTFEEMYLGQHIRNIIATEGEERIFRHMKIDAWRKFFHRFGMVEAELSTSSLFQAE 376
D ER+ E G+ N+IA EG ER+ R W R G+V+ S + +
Sbjct: 618 DEERMFLEMEVFGREALNVIACEGWERVERPETYKQWHVRAMRSGLVQVPFDPSIMKTSL 677
Query: 377 LVIKNFAFASYLTLDRNGQCLIVGWKGSPQLSLSVW 412
+ F ++ +D++ + L+ GWKG ++LSVW
Sbjct: 678 HKVHTFYHKDFV-IDQDNRWLLQGWKGRTVMALSVW 712
>TAIR|locus:2174974 [details] [associations]
symbol:AT5G66770 "AT5G66770" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB010700
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY062538 EMBL:BT002580
IPI:IPI00537848 RefSeq:NP_201478.1 UniGene:At.27307
ProteinModelPortal:Q9FL03 IntAct:Q9FL03 PRIDE:Q9FL03
EnsemblPlants:AT5G66770.1 GeneID:836810 KEGG:ath:AT5G66770
GeneFarm:4249 TAIR:At5g66770 eggNOG:NOG324692 HOGENOM:HOG000240374
InParanoid:Q9FL03 OMA:DASCSAP PhylomeDB:Q9FL03
ProtClustDB:CLSN2684429 Genevestigator:Q9FL03 Uniprot:Q9FL03
Length = 584
Score = 329 (120.9 bits), Expect = 4.2e-29, P = 4.2e-29
Identities = 112/395 (28%), Positives = 184/395 (46%)
Query: 33 NISEEESKDVE--LVHLLILCAEKIGSQQFDRASTLLDHCENFSSKIGNSVERVVHYFVK 90
N SE++ D+E L+ + CA S + + TLL E+ S ++G+ ERV YF +
Sbjct: 204 NDSEDDDFDLEPPLLKAIYDCARISDSDPNEASKTLLQIRESVS-ELGDPTERVAFYFTE 262
Query: 91 ALQERFNRETGKITSKRVKGEEIQLLQPEETILSLRPALVACYKESSFYQATLFAGTQAI 150
AL R + + +S E++ ILS + AC S F T QAI
Sbjct: 263 ALSNRLSPNSPATSSSSSSTEDL--------ILSYKTLNDAC-PYSKFAHLT---ANQAI 310
Query: 151 IERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAV-----GSSSKQRME 205
+E + +IH++D I G L+QALATR ++++ + G S + +
Sbjct: 311 LEATEKSNKIHIVDFGIVQGIQWPALLQALATRTSGKPTQIRVSGIPAPSLGESPEPSLI 370
Query: 206 ETGKRLAYFAETWNLPFSFKIVLVTETKDLNEDKFDLNAGEAVAVYSPI----LLSRTRH 261
TG RL FA+ +L F F I ++T LN F ++ E +AV + LL T
Sbjct: 371 ATGNRLRDFAKVLDLNFDF-IPILTPIHLLNGSSFRVDPDEVLAVNFMLQLYKLLDETPT 429
Query: 262 -PDFLIKMLRKISPCVMVIIEVEANHNSQNFEDRFFEVLFHYSASFDCLKVSMARCDPER 320
D +++ + ++P V+ + E E + N F +R L YSA F+ L+ ++ R ER
Sbjct: 430 IVDTALRLAKSLNPRVVTLGEYEVSLNRVGFANRVKNALQFYSAVFESLEPNLGRDSEER 489
Query: 321 VTFEEMYLGQHIRNIIATE--GEERIFRHMKIDAWRKFFHRFGMVEAELSTSSLFQAELV 378
V E G+ I +I E G R K + WR G +LS ++ QA+++
Sbjct: 490 VRVERELFGRRISGLIGPEKTGIHRERMEEK-EQWRVLMENAGFESVKLSNYAVSQAKIL 548
Query: 379 IKNFAFAS-YLTLDRNGQCLIVGWKGSPQLSLSVW 412
+ N+ +++ Y ++ + + W P L+LS W
Sbjct: 549 LWNYNYSNLYSIVESKPGFISLAWNDLPLLTLSSW 583
>TAIR|locus:2132482 [details] [associations]
symbol:AT4G08250 "AT4G08250" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AL080252 EMBL:AL161510
EMBL:BT011797 IPI:IPI00529829 PIR:T10552 RefSeq:NP_192565.1
UniGene:At.50325 DNASU:826375 EnsemblPlants:AT4G08250.1
GeneID:826375 KEGG:ath:AT4G08250 GeneFarm:4263 TAIR:At4g08250
eggNOG:NOG320032 HOGENOM:HOG000239937 InParanoid:Q9SUF5 OMA:SLEAGFP
PhylomeDB:Q9SUF5 ProtClustDB:CLSN2685964 Genevestigator:Q9SUF5
Uniprot:Q9SUF5
Length = 483
Score = 310 (114.2 bits), Expect = 1.9e-27, P = 1.9e-27
Identities = 108/397 (27%), Positives = 187/397 (47%)
Query: 37 EESKDVELVHLLILCAEKIGSQQFDRAST--LLDHCENFSSKIGN--SVERVVHYFVKAL 92
+ESK + LVHLL+ A+ R T +L ++ S G+ ++ER+ +F L
Sbjct: 97 DESKGLRLVHLLVAAADASTGANKSRELTRVILARLKDLVSP-GDRTNMERLAAHFTNGL 155
Query: 93 QERFNRETGKITSKRVKGEEIQLLQPEETILSLRPALVACYKESSFYQATLFAGTQAIIE 152
+ R++ + + +++ + ++S A S + TQAI+E
Sbjct: 156 SKLLERDS--VLCPQQHRDDVY---DQADVIS---AFELLQNMSPYVNFGYLTATQAILE 207
Query: 153 RVASAKRIHLIDLAIRSGSHCIVLMQALATRQECP-VELLKITAV-----GSSSKQRMEE 206
V +RIH++D I G LMQAL +R P + L+ITA+ G S ++E
Sbjct: 208 AVKYERRIHIVDYDINEGVQWASLMQALVSRNTGPSAQHLRITALSRATNGKKSVAAVQE 267
Query: 207 TGKRLAYFAETWNLPFSFKIVLVTETKDLNEDKFDLNAGEAVAVYSPILLSRTRH--PDF 264
TG+RL FA++ PFS++ + +T + L GEAV + + L R H P
Sbjct: 268 TGRRLTAFADSIGQPFSYQHCKL-DTNAFSTSSLKLVRGEAVVINCMLHLPRFSHQTPSS 326
Query: 265 LIKML---RKISPCVMVIIEVEAN-HNSQNFEDRFFEVLFHYSASFDCLKVSMARCDPER 320
+I L + ++P ++ ++ E +Q F RF ++L +SA FD L+ ++ +P R
Sbjct: 327 VISFLSEAKTLNPKLVTLVHEEVGLMGNQGFLYRFMDLLHQFSAIFDSLEAGLSIANPAR 386
Query: 321 VTFEEMYLGQHIRN----IIATEGEERIFRHMKIDAWRKFFHRFGMVEAELSTSSLFQAE 376
E +++G + N I A + E F +W ++ G E+S ++ QA+
Sbjct: 387 GFVERVFIGPWVANWLTRITANDAEVESFA-----SWPQWLETNGFKPLEVSFTNRCQAK 441
Query: 377 LVIKNFAFASYLT-LDRNGQCLIVGWKGSPQLSLSVW 412
L++ F + L +NG L++GWK +S S W
Sbjct: 442 LLLSLFNDGFRVEELGQNG--LVLGWKSRRLVSASFW 476
>TAIR|locus:2026982 [details] [associations]
symbol:SCL1 "AT1G21450" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
EMBL:AC015447 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF210731 EMBL:AY045833 EMBL:AY096626
EMBL:AY084492 EMBL:AF036300 IPI:IPI00538394 PIR:E86347 PIR:T51234
RefSeq:NP_173566.1 UniGene:At.14825 ProteinModelPortal:Q9SDQ3
STRING:Q9SDQ3 PaxDb:Q9SDQ3 PRIDE:Q9SDQ3 EnsemblPlants:AT1G21450.1
GeneID:838743 KEGG:ath:AT1G21450 GeneFarm:4232 TAIR:At1g21450
eggNOG:NOG324880 InParanoid:Q9SDQ3 OMA:SINDEWA PhylomeDB:Q9SDQ3
ProtClustDB:CLSN2913658 Genevestigator:Q9SDQ3 Uniprot:Q9SDQ3
Length = 593
Score = 277 (102.6 bits), Expect = 4.7e-22, P = 4.7e-22
Identities = 94/381 (24%), Positives = 168/381 (44%)
Query: 47 LLILCAEKIGSQQFDRASTLLDHCENFSSKIGNSVERVVHYFVKALQERFNRETGKITSK 106
+LI CA + + + A ++++ S G+ +R+ Y V+ L R +GK +
Sbjct: 225 ILISCARALSEGKLEEALSMVNELRQIVSIQGDPSQRIAAYMVEGLAARM-AASGKFIYR 283
Query: 107 RVKGEEIQLLQPEETILSLRPALVACYKESSFYQATLFAGTQAIIERVASAKRIHLIDLA 166
+K +E P + L+ A+ ++ ++ A AI+E + + +H+ID
Sbjct: 284 ALKCKE----PPSDERLA---AMQVLFEVCPCFKFGFLAANGAILEAIKGEEEVHIIDFD 336
Query: 167 IRSGSHCIVLMQALATRQECPVEL--LKITAVGS-SSKQR----MEETGKRLAYFAETWN 219
I G+ + L++++A E P + L++T + S QR + G RL AE
Sbjct: 337 INQGNQYMTLIRSIA---ELPGKRPRLRLTGIDDPESVQRSIGGLRIIGLRLEQLAEDNG 393
Query: 220 LPFSFKIVLVTETKDLNEDKFDLNAGEAVAVYSPILL--------SRTRHPDFLIKMLRK 271
+ F FK + ++T ++ GE + V L + D L+ M++
Sbjct: 394 VSFKFK-AMPSKTSIVSPSTLGCKPGETLIVNFAFQLHHMPDESVTTVNQRDELLHMVKS 452
Query: 272 ISPCVMVIIEVEANHNSQNFEDRFFEVLFHYSASFDCLKVSMARCDPERVTFEEMYLGQH 331
++P ++ ++E + N N+ F RF E +YSA F+ L +++ R ER+ E L +
Sbjct: 453 LNPKLVTVVEQDVNTNTSPFFPRFIEAYEYYSAVFESLDMTLPRESQERMNVERQCLARD 512
Query: 332 IRNIIATEGEERIFRHMKIDAWRKFFHRFGMVEAELSTSSLFQAELVIKNFAFASYLTLD 391
I NI+A EGEERI R+ WR G +S + +IK Y +
Sbjct: 513 IVNIVACEGEERIERYEAAGKWRARMMMAGFNPKPMSAKVTNNIQNLIKQQYCNKYKLKE 572
Query: 392 RNGQCLIVGWKGSPQLSLSVW 412
G+ L W+ + S W
Sbjct: 573 EMGE-LHFCWEEKSLIVASAW 592
>TAIR|locus:2101694 [details] [associations]
symbol:AT3G50650 "AT3G50650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132979
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000240374
ProtClustDB:CLSN2684429 EMBL:AK229252 EMBL:AF036304 IPI:IPI00542878
PIR:T46142 PIR:T51238 RefSeq:NP_190634.1 UniGene:At.42939
PaxDb:Q9SCR0 PRIDE:Q9SCR0 EnsemblPlants:AT3G50650.1 GeneID:824228
KEGG:ath:AT3G50650 GeneFarm:4248 TAIR:At3g50650 eggNOG:NOG329237
InParanoid:Q9SCR0 OMA:LIRIKES PhylomeDB:Q9SCR0
Genevestigator:Q9SCR0 Uniprot:Q9SCR0
Length = 542
Score = 261 (96.9 bits), Expect = 4.0e-20, P = 4.0e-20
Identities = 95/367 (25%), Positives = 166/367 (45%)
Query: 62 RASTLLDHCENFSSKIGNSVERVVHYFVKALQERFNRETGKITSKRVKGEEIQLLQPEET 121
+ TL+ E+ S G+ ++RV +YF +AL + +S + E+
Sbjct: 191 KPDTLIRIKESVSES-GDPIQRVGYYFAEALSHKETESPSSSSSSSL----------EDF 239
Query: 122 ILSLRPALVACYKESSFYQATLFAGTQAIIERVASAKRIHLIDLAIRSGSHCIVLMQALA 181
ILS + AC S F T QAI+E + IH++D I G L+QALA
Sbjct: 240 ILSYKTLNDAC-PYSKFAHLT---ANQAILEATNQSNNIHIVDFGIFQGIQWSALLQALA 295
Query: 182 TRQECPVELLKITAV-----GSSSKQRMEETGKRLAYFAETWNLPFSFKIVLVTETKDLN 236
TR ++I+ + G S + TG RL FA +L F F VL T + LN
Sbjct: 296 TRSSGKPTRIRISGIPAPSLGDSPGPSLIATGNRLRDFAAILDLNFEFYPVL-TPIQLLN 354
Query: 237 EDKFDLNAGEAVAVYSPI----LLSRTRHP-DFLIKMLRKISPCVMVIIEVEANHNSQNF 291
F ++ E + V + LL T +++ R ++P ++ + E E + N F
Sbjct: 355 GSSFRVDPDEVLVVNFMLELYKLLDETATTVGTALRLARSLNPRIVTLGEYEVSLNRVEF 414
Query: 292 EDRFFEVLFHYSASFDCLKVSMARCDPERVTFEEMYLGQHIRNIIATEGEERI----FRH 347
+R L YSA F+ L+ ++ R ER+ E + G+ I +++ ++ + F
Sbjct: 415 ANRVKNSLRFYSAVFESLEPNLDRDSKERLRVERVLFGRRIMDLVRSDDDNNKPGTRFGL 474
Query: 348 MKI-DAWRKFFHRFGMVEAELSTSSLFQAELVIKNFAFAS-YLTLDRNGQCLIVGWKGSP 405
M+ + WR + G + S ++ QA+L++ N+ +++ Y ++ + + W P
Sbjct: 475 MEEKEQWRVLMEKAGFEPVKPSNYAVSQAKLLLWNYNYSTLYSLVESEPGFISLAWNNVP 534
Query: 406 QLSLSVW 412
L++S W
Sbjct: 535 LLTVSSW 541
>UNIPROTKB|Q84MM9 [details] [associations]
symbol:MOC1 "Protein MONOCULM 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0010014 "meristem initiation" evidence=IMP] Pfam:PF03514
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY242058 EMBL:AP003616 Gramene:Q84MM9
eggNOG:NOG323432 GO:GO:0010014 Uniprot:Q84MM9
Length = 441
Score = 150 (57.9 bits), Expect = 4.0e-17, Sum P(2) = 4.0e-17
Identities = 50/182 (27%), Positives = 83/182 (45%)
Query: 241 DLNAGEAVAVYSPILLSRTRHPDFL---IKMLRKISPCVMVIIEVEANHNS---QNFED- 293
+ + E +AV + L D L +K ++ +SP V+ I E EA + +D
Sbjct: 259 EFHPDETLAVNCVMFLHNLAGHDELAAFLKWVKAMSPAVVTIAEREAGGGGGGGDHIDDL 318
Query: 294 --RFFEVLFHYSASFDCLKVSMARCDPERVTFEEMYLGQHIRNIIATEGEERIFRHMKID 351
R + HYSA F+ L+ ++ ER+ E+ LG+ I + G R +R I+
Sbjct: 319 PRRVGVAMDHYSAVFEALEATVPPGSRERLAVEQEVLGREIEAAVGPSGG-RWWRG--IE 375
Query: 352 AWRKFFHRFGMVEAELSTSSLFQAELVIK-NFAFASYLTLDRNGQCLIVGWKGSPQLSLS 410
W G LS ++ QA L+++ ++ YL + G C + GW+ P LS+S
Sbjct: 376 RWGGAARAAGFAARPLSAFAVSQARLLLRLHYPSEGYLVQEARGACFL-GWQTRPLLSVS 434
Query: 411 VW 412
W
Sbjct: 435 AW 436
Score = 133 (51.9 bits), Expect = 4.0e-17, Sum P(2) = 4.0e-17
Identities = 56/222 (25%), Positives = 98/222 (44%)
Query: 47 LLILCAEKIGSQQFDRASTLLDHC-ENFSSKIGNSVERVVHYFVKALQERFNRETGKITS 105
LL+ CA+ + A + +S G++ +R+ ++F +AL R + + G
Sbjct: 53 LLLACADLLQRGDLPAARRAAEIVLAAAASPRGDAADRLAYHFARALALRVDAKAGH--G 110
Query: 106 KRVKGEEIQLLQPEETILSLRPALVACYKESSFYQATLFAGTQAIIERVASAKRIHLIDL 165
V G +P + A +A + + F + QAI+E V A+R+H++DL
Sbjct: 111 HVVVGGGAA--RPASS-----GAYLAFNQIAPFLRFAHLTANQAILEAVDGARRVHILDL 163
Query: 166 AIRSGSHCIVLMQALATRQEC---PVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPF 222
G L+QA+A R + P E+ ++T G+ + + TG RL FA + +LPF
Sbjct: 164 DAVHGVQWPPLLQAIAERADPALGPPEV-RVTGAGAD-RDTLLRTGNRLRAFARSIHLPF 221
Query: 223 SFKIVLVTETKDLNEDKFDLNAGEAVAVYSPILLSRTR-HPD 263
F +L++ + G A A + + HPD
Sbjct: 222 HFTPLLLSCATTAPHHVAGTSTGAAAAASTAAAATGLEFHPD 263
>TAIR|locus:2083073 [details] [associations]
symbol:AT3G49950 "AT3G49950" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132978
InterPro:IPR005202 PROSITE:PS50985 eggNOG:NOG309215 EMBL:BT012553
EMBL:AK226623 IPI:IPI00534186 PIR:T45848 RefSeq:NP_190564.1
UniGene:At.50260 EnsemblPlants:AT3G49950.1 GeneID:824157
KEGG:ath:AT3G49950 GeneFarm:4259 TAIR:At3g49950
HOGENOM:HOG000241523 InParanoid:Q9SN22 OMA:MSMDFRV PhylomeDB:Q9SN22
ProtClustDB:CLSN2684384 Genevestigator:Q9SN22 Uniprot:Q9SN22
Length = 410
Score = 145 (56.1 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 52/191 (27%), Positives = 86/191 (45%)
Query: 47 LLILCAEKIGSQQFDRASTLLDHCENFSSKIGNSVERVVHYFVKALQERFNRETGKITSK 106
LL+ CA I S +L N + G+S +R+ F++AL R +T ++S
Sbjct: 30 LLLHCATAIDSNDAALTHQILWVLNNIAPPDGDSTQRLTSAFLRALLSRAVSKTPTLSST 89
Query: 107 RVKGEEIQLLQPEETILSLRPALVACYKE-SSFYQATLFAGTQAIIERVASAKRIHLIDL 165
I L + + +A + + + +++ A AI+ V +H++DL
Sbjct: 90 ------ISFLPQADELHRFSVVELAAFVDLTPWHRFGFIAANAAILTAVEGYSTVHIVDL 143
Query: 166 AIRSGSHCI---VLMQALATRQECPVELLKITAVGSSS------KQRMEETGKRLAYFAE 216
++ +HC+ L+ A+A+R P LLK+T V SS EE G +L FA
Sbjct: 144 SL---THCMQIPTLIDAMASRLNKPPPLLKLTVVSSSDHFPPFINISYEELGSKLVNFAT 200
Query: 217 TWNLPFSFKIV 227
T N+ F IV
Sbjct: 201 TRNITMEFTIV 211
Score = 130 (50.8 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 53/225 (23%), Positives = 97/225 (43%)
Query: 205 EETGKRLAYFAETWNLPFSFKIVLVTETKD----LNEDK-FDLNAGEAVAV-------Y- 251
EE G +L FA T N+ F IV T + L + + + + EA+ V Y
Sbjct: 189 EELGSKLVNFATTRNITMEFTIVPSTYSDGFSSLLQQLRIYPSSFNEALVVNCHMMLRYI 248
Query: 252 --SPILLSRTRHPDFLIKMLRKISPCVMVIIEVEANHNSQNFEDRFFEVLFHYSASFDCL 309
P+ S + +K LR ++P ++ +IE + + S+N +R ++ FD
Sbjct: 249 PEEPLTSSSSSLRTVFLKQLRSLNPRIVTLIEEDVDLTSENLVNRLKSAFNYFWIPFDTT 308
Query: 310 KVSMARCDPERVTFEEMYLGQHIRNIIATEGEERIFRHMKIDAW--RKFFHRFGMVEAEL 367
M+ E+ + E + I N++A EG ER+ R W R FG V +
Sbjct: 309 DTFMS----EQRRWYEAEISWKIENVVAKEGAERVERTETKRRWIERMREAEFGGVRVK- 363
Query: 368 STSSLFQAELVIKNFAFASYLTLDRNGQCLIVGWKGSPQLSLSVW 412
++ + +++ A + + + + L++ WKG + +VW
Sbjct: 364 -EDAVADVKAMLEEHAVGWGMKKEDDDESLVLTWKGHSVVFATVW 407
>TAIR|locus:2115340 [details] [associations]
symbol:HAM4 "AT4G36710" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048831 "regulation of shoot system development" evidence=IGI]
Pfam:PF03514 GO:GO:0005634 GO:GO:0030154 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0048831
EMBL:AL161589 EMBL:Z99708 InterPro:IPR005202 PROSITE:PS50985
EMBL:AK118497 IPI:IPI00538111 PIR:E85433 RefSeq:NP_195389.4
UniGene:At.31304 PaxDb:O23210 PRIDE:O23210 DNASU:829824
EnsemblPlants:AT4G36710.1 GeneID:829824 KEGG:ath:AT4G36710
GeneFarm:4264 TAIR:At4g36710 eggNOG:NOG271584 HOGENOM:HOG000090733
InParanoid:O23210 OMA:ELVLCWH ProtClustDB:CLSN2717261
Genevestigator:O23210 Uniprot:O23210
Length = 486
Score = 192 (72.6 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 89/379 (23%), Positives = 149/379 (39%)
Query: 43 ELVHLLILCAEKIGSQQFDRASTLLDHC-ENFSSKIGNSVERVVHYFVKALQERFNRETG 101
+ + LI + + S + A +L + S G ++R YF +AL TG
Sbjct: 121 DFIEDLIRVVDCVESDELQLAQVVLSRLNQRLRSPAGRPLQRAAFYFKEALGSFL---TG 177
Query: 102 KITSKRVKGEEIQLLQPEETILSLRPALVACYKESSFYQATLFAGTQAIIERVASAKR-- 159
S R I+L E + +R A+ S + F QAI++ ++S
Sbjct: 178 ---SNR---NPIRLSSWSEIVQRIR-AIKEYSGISPIPLFSHFTANQAILDSLSSQSSSP 230
Query: 160 -IHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAV-GSSSKQRMEETGKRLAYFAET 217
+H++D I G LM+ + T + L++TAV + L FA
Sbjct: 231 FVHVVDFEIGFGGQYASLMREI-TEKSVSGGFLRVTAVVAEECAVETRLVKENLTQFAAE 289
Query: 218 WNLPFSFKIVLVTETKDLNEDKFDLNAGE-AVAVYSPILLSRTRHPDFLIKMLRKISPCV 276
+ F + VL+ + L+ GE V + SP + R + LR++SP V
Sbjct: 290 MKIRFQIEFVLMKTFEMLSFKAIRFVEGERTVVLISPAIFRRLSGITDFVNNLRRVSPKV 349
Query: 277 MVIIEVEA---NHNSQNFEDRFFEVLFHYSASFDCLKVSMARCDPERVTFEEMYLGQHIR 333
+V ++ E S +F F L Y+ + L + D + E L I
Sbjct: 350 VVFVDSEGWTEIAGSGSFRREFVSALEFYTMVLESLDAAAPPGDLVKKIVEAFVLRPKIS 409
Query: 334 NIIATEGEERIFRHMKIDAWRKFFHRFGMVEAELSTSSLFQAELVIKNFAFASYLTLDRN 393
+ T + R H WR+ F GM +LS + FQAE +++ + R
Sbjct: 410 AAVETAADRR---HTGEMTWREAFCAAGMRPIQLSQFADFQAECLLEKAQVRGFHVAKRQ 466
Query: 394 GQCLIVGWKGSPQLSLSVW 412
G+ L++ W G ++ S W
Sbjct: 467 GE-LVLCWHGRALVATSAW 484
>TAIR|locus:2120106 [details] [associations]
symbol:SHR "AT4G37650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008356 "asymmetric cell division"
evidence=IMP] [GO:0009956 "radial pattern formation" evidence=IMP]
[GO:0032350 "regulation of hormone metabolic process" evidence=NAS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0055072 "iron ion
homeostasis" evidence=IMP] [GO:0045930 "negative regulation of
mitotic cell cycle" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 GO:GO:0005737
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0007049 EMBL:AL035605 EMBL:AL161591
GO:GO:0048366 GO:GO:0008356 GO:GO:0055072 GO:GO:0009956
GO:GO:0032350 InterPro:IPR005202 PROSITE:PS50985 EMBL:AF233752
EMBL:BT033026 EMBL:AY074547 IPI:IPI00525426 PIR:T04722
RefSeq:NP_195480.1 UniGene:At.2816 UniGene:At.71893 IntAct:Q9SZF7
STRING:Q9SZF7 PaxDb:Q9SZF7 PRIDE:Q9SZF7 EnsemblPlants:AT4G37650.1
GeneID:829919 KEGG:ath:AT4G37650 GeneFarm:4260 TAIR:At4g37650
eggNOG:NOG301144 HOGENOM:HOG000078767 InParanoid:Q9SZF7 OMA:EIGNRME
PhylomeDB:Q9SZF7 ProtClustDB:CLSN2685807 Genevestigator:Q9SZF7
Uniprot:Q9SZF7
Length = 531
Score = 183 (69.5 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 67/267 (25%), Positives = 122/267 (45%)
Query: 47 LLILCAEKIGSQQFDRASTLLDHCENFSSKIGNSVERVVHYFVKALQERFNRETGKITSK 106
+L+ A + RA +L SS G++ +++ YF++AL FNR TG + +
Sbjct: 146 VLLEAARAFSDKDTARAQQILWTLNELSSPYGDTEQKLASYFLQAL---FNRMTG--SGE 200
Query: 107 RVKGEEIQLLQPEETIL--SLRPALVACYKESSFYQATLFAGTQAIIERVASAKRIHLID 164
R + E+T S R ++ + S + A AI+E V +IH++D
Sbjct: 201 RCYRTMVTAAATEKTCSFESTRKTVLKFQEVSPWATFGHVAANGAILEAVDGEAKIHIVD 260
Query: 165 LAIRSGSHCIVLMQALATRQECPVELLKITAV--------GSSSKQRMEETGKRLAYFAE 216
++ + L++ALATR + L T V ++S + M+E G R+ FA
Sbjct: 261 ISSTFCTQWPTLLEALATRSDDTPHLRLTTVVVANKFVNDQTASHRMMKEIGNRMEKFAR 320
Query: 217 TWNLPFSFKIVL-VTETKDLNEDKFDLNAGEAVAV--YSPI--LLSRTRHPDFLIKMLRK 271
+PF F I+ V + + + ++ D+ E +A+ + + SR D +I R+
Sbjct: 321 LMGVPFKFNIIHHVGDLSEFDLNELDVKPDEVLAINCVGAMHGIASRGSPRDAVISSFRR 380
Query: 272 ISPCVMVIIEVEAN---HNSQNFEDRF 295
+ P ++ ++E EA+ F+D F
Sbjct: 381 LRPRIVTVVEEEADLVGEEEGGFDDEF 407
>TAIR|locus:2126901 [details] [associations]
symbol:HAM3 "AT4G00150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010492 "maintenance of shoot apical meristem identity"
evidence=IGI] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048768 "root hair cell tip growth" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=IEP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0051301 GO:GO:0007623 GO:GO:0003700
GO:GO:0006351 GO:GO:0048768 GO:GO:0010492 EMBL:AL161471
EMBL:AF069299 InterPro:IPR005202 PROSITE:PS50985
HOGENOM:HOG000239326 eggNOG:NOG320780 EMBL:AF462831 EMBL:AY133537
EMBL:AF036303 EMBL:EU550755 EMBL:EU550756 EMBL:EU550757
EMBL:EU550758 EMBL:EU550759 EMBL:EU550760 EMBL:EU550761
EMBL:EU550762 EMBL:EU550763 EMBL:EU550764 EMBL:EU550765
EMBL:EU550766 EMBL:EU550767 EMBL:EU550768 EMBL:EU550769
EMBL:EU550770 EMBL:EU550771 EMBL:EU550772 EMBL:EU550773
EMBL:EU550774 EMBL:EU550775 EMBL:EU550776 EMBL:EU550777
IPI:IPI00542979 PIR:T01343 PIR:T51237 RefSeq:NP_191926.1
UniGene:At.3732 UniGene:At.67226 IntAct:O81316
EnsemblPlants:AT4G00150.1 GeneID:828208 KEGG:ath:AT4G00150
GeneFarm:4228 TAIR:At4g00150 InParanoid:O81316 OMA:KTPPWRA
PhylomeDB:O81316 ProtClustDB:CLSN2916162 Genevestigator:O81316
Uniprot:O81316
Length = 558
Score = 180 (68.4 bits), Expect = 9.0e-11, P = 9.0e-11
Identities = 84/375 (22%), Positives = 140/375 (37%)
Query: 42 VELVHLLILCAEKIGSQQFDRASTLLDHCENFSSKIGNSVERVVHYFVKALQERFNRETG 101
V + L+ AE I S L + SS +G +ER YF +AL + +
Sbjct: 203 VGITEQLVKAAEVIESDTCLAQGILARLNQQLSSPVGKPLERAAFYFKEALNNLLHNVS- 261
Query: 102 KITSKRVKGEEIQLLQPEETILSLRPALVACYKE-SSFYQATLFAGTQAIIERVASAKRI 160
Q L P I + A + E S Q F QA++E R+
Sbjct: 262 ------------QTLNPYSLIFKI--AAYKSFSEISPVLQFANFTSNQALLESFHGFHRL 307
Query: 161 HLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETG---KRLAYFAET 217
H+ID I G LMQ L R LKIT S + E G L +FA
Sbjct: 308 HIIDFDIGYGGQWASLMQELVLRDNAAPLSLKITVFASPANHDQLELGFTQDNLKHFASE 367
Query: 218 WNLPFSFKIVLVTETKDLNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKMLRKISPCVM 277
N+ +++ + DL N+ E AV I + H +++ ++ +SP ++
Sbjct: 368 INISLDIQVLSL----DLLGSISWPNSSEKEAVAVNISAASFSHLPLVLRFVKHLSPTII 423
Query: 278 VIIEVEANHNSQNFEDRFFEVLFHYSASFDCLKVSMARCDPERVTFEEMYLGQHIRNIIA 337
V + F + L ++A F+ L A D + E + I ++
Sbjct: 424 VCSDRGCERTDLPFSQQLAHSLHSHTALFESLDAVNANLDAMQ-KIERFLIQPEIEKLVL 482
Query: 338 TEGEERIFRHMKIDAWRKFFHRFGMVEAELSTSSLFQAELVIKNFAFASYLTLDRNGQCL 397
I R M W+ F + G S + QAE +++ + +++ L
Sbjct: 483 DRSRP-IERPMM--TWQAMFLQMGFSPVTHSNFTESQAECLVQRTPVRGF-HVEKKHNSL 538
Query: 398 IVGWKGSPQLSLSVW 412
++ W+ + + +S W
Sbjct: 539 LLCWQRTELVGVSAW 553
>UNIPROTKB|Q6DLS1 [details] [associations]
symbol:SCL1 "SCARECROW-like protein" species:3708 "Brassica
napus" [GO:0005515 "protein binding" evidence=IPI] Pfam:PF03514
GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202 PROSITE:PS50985
EMBL:AY664405 IntAct:Q6DLS1 Uniprot:Q6DLS1
Length = 461
Score = 169 (64.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 84/374 (22%), Positives = 143/374 (38%)
Query: 48 LILCAEKIGSQQFDRASTLLDHC-ENFSSKIGNSVERVVHYFVKALQERFNRETGKITSK 106
LI + I S + A +L + + G ++R YF +AL TG T++
Sbjct: 103 LIRVVDCIESDELHLAHVVLSQLNQRLQTSAGRPLQRAAFYFKEALGSLL---TG--TNR 157
Query: 107 RVKGEEIQLLQPEETILSLRPALVACYKESSFYQATLFAGTQAIIERVASAKR---IHLI 163
QL + + +R A+ S + F QAI++ ++S +H++
Sbjct: 158 N------QLFSWSDIVQKIR-AIKEFSGISPIPLFSHFTANQAILDSLSSQSSSPFVHVV 210
Query: 164 DLAIRSGSHCIVLMQALATRQECPVELLKITAV-GSSSKQRMEETGKRLAYFAETWNLPF 222
D I G LM+ +A + L++TAV + L FA + F
Sbjct: 211 DFEIGFGGQYASLMREIAEKS-ANGGFLRVTAVVAEDCAVETRLVKENLTQFAAEMKIRF 269
Query: 223 SFKIVLVTETKDLNEDKFDLNAGE-AVAVYSPILLSRTRHPDFLIKMLRKISPCVMVIIE 281
+ VL+ + L+ GE V + SP + R + L ++SP V+V ++
Sbjct: 270 QIEFVLMKTFEILSFKAIRFVDGERTVVLISPAIFRRVIGIAEFVNNLGRVSPNVVVFVD 329
Query: 282 VEA---NHNSQNFEDRFFEVLFHYSASFDCLKVSMARCDPERVTFEEMYLGQHIRNIIAT 338
E S +F F Y+ + L + D + E L I + T
Sbjct: 330 SEGCTETAGSGSFRREFVSAFEFYTMVLESLDAAAPPGDLVKKIVETFLLRPKISAAVET 389
Query: 339 EGEERIFRHMKIDAWRKFFHRFGMVEAELSTSSLFQAELVIKNFAFASYLTLDRNGQCLI 398
R M WR+ GM +LS + FQAE +++ + R G+ L+
Sbjct: 390 AANRRSAGQM---TWREMLCAAGMRPVQLSQFADFQAECLLEKAQVRGFHVAKRQGE-LV 445
Query: 399 VGWKGSPQLSLSVW 412
+ W G ++ S W
Sbjct: 446 LCWHGRALVATSAW 459
>TAIR|locus:2101801 [details] [associations]
symbol:HAM2 "AT3G60630" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] [GO:0007020 "microtubule
nucleation" evidence=RCA] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0051301 GO:GO:0003700 GO:GO:0006351
GO:GO:0048768 GO:GO:0010492 EMBL:AL162295 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY064062 EMBL:AY096372 EMBL:EU550731
EMBL:EU550732 EMBL:EU550733 EMBL:EU550734 EMBL:EU550735
EMBL:EU550736 EMBL:EU550737 EMBL:EU550738 EMBL:EU550739
EMBL:EU550740 EMBL:EU550741 EMBL:EU550742 EMBL:EU550743
EMBL:EU550744 EMBL:EU550745 EMBL:EU550746 EMBL:EU550747
EMBL:EU550748 EMBL:EU550749 EMBL:EU550750 EMBL:EU550752
EMBL:EU550754 EMBL:EU550751 EMBL:EU550753 IPI:IPI00520916
PIR:T47874 RefSeq:NP_191622.1 UniGene:At.27084 IntAct:Q9M000
EnsemblPlants:AT3G60630.1 GeneID:825234 KEGG:ath:AT3G60630
GeneFarm:4227 TAIR:At3g60630 eggNOG:NOG261649 HOGENOM:HOG000239326
InParanoid:Q9M000 OMA:ANQTILE PhylomeDB:Q9M000
ProtClustDB:CLSN2683334 Genevestigator:Q9M000 Uniprot:Q9M000
Length = 623
Score = 171 (65.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 75/313 (23%), Positives = 131/313 (41%)
Query: 116 LQPEETILSLRPALVACYKESS-FYQATLFAGTQAIIERVASAKRIHLIDLAIRSGSHCI 174
L P + ++ R A + E+S F Q F Q I+E RIH++D I G
Sbjct: 317 LSPPQNLI-FRIAAYRAFSETSPFLQFVNFTANQTILESFEGFDRIHIVDFDIGYGGQWA 375
Query: 175 VLMQALATRQE--CPVELLKITAVGS----SSKQRMEETGKRLAYFAETWNLPFSFKIVL 228
L+Q LA ++ LKITA S S + + T + L FA + SF+I L
Sbjct: 376 SLIQELAGKRNRSSSAPSLKITAFASPSTVSDEFELRFTEENLRSFAGETGV--SFEIEL 433
Query: 229 VTETKDLNEDKFDLNA-----GEAVAVYSPILLSRTRHPDFLIKMLRKISPCVMVIIEVE 283
+ LN + L+ EA+AV PI + + +++ L++ISP V+V +
Sbjct: 434 LNMEILLNPTYWPLSLFRSSEKEAIAVNLPISSMVSGYLPLILRFLKQISPNVVVCSDRS 493
Query: 284 ANHNSQN-FEDRFFEVLFHYSASFDCLKVSMARCDPERVTFEEMYLGQHIRNIIATEGEE 342
+ N+ F + L +Y++ + L + E + I+ ++
Sbjct: 494 CDRNNDAPFPNGVINALQYYTSLLESLDSGNLNNAEAATSIERFCVQPSIQKLLTNR--- 550
Query: 343 RIFRHM-KIDAWRKFFHRFGMVEAELSTSSLFQAELVIKNFAFASYLTLDRNGQC--LIV 399
+R M + WR F + G LS ++ QAE +++ + R L++
Sbjct: 551 --YRWMERSPPWRSLFGQCGFTPVTLSQTAETQAEYLLQRNPMRGFHLEKRQSSSPSLVL 608
Query: 400 GWKGSPQLSLSVW 412
W+ +++S W
Sbjct: 609 CWQRKELVTVSAW 621
>TAIR|locus:2055622 [details] [associations]
symbol:HAM1 "AT2G45160" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] Pfam:PF03514
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0051301
GO:GO:0003700 GO:GO:0006351 GO:GO:0048768 GO:GO:0010492
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000239326
ProtClustDB:CLSN2683334 EMBL:BT004053 EMBL:BT020591 IPI:IPI00534274
PIR:B84887 RefSeq:NP_182041.1 UniGene:At.27046 UniGene:At.67081
UniGene:At.74179 STRING:Q7XJM8 PaxDb:Q7XJM8 PRIDE:Q7XJM8
EnsemblPlants:AT2G45160.1 GeneID:819124 KEGG:ath:AT2G45160
GeneFarm:4226 TAIR:At2g45160 eggNOG:NOG320780 InParanoid:Q7XJM8
OMA:HRWIERS PhylomeDB:Q7XJM8 Genevestigator:Q7XJM8 Uniprot:Q7XJM8
Length = 640
Score = 165 (63.1 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 81/363 (22%), Positives = 151/363 (41%)
Query: 67 LDHCENFSSKIGNSVERVVHYFVKALQERFNRETGKITSKRVKGEEIQLLQPEETILSLR 126
L+H N SS + +R + +AL + E+ L+ PE IL R
Sbjct: 300 LNHHLNTSSNHKSPFQRAASHIAEALLSLIHNESSP-----------PLITPENLIL--R 346
Query: 127 PALVACYKESS-FYQATLFAGTQAIIERVASA--KRIHLIDLAIRSGSHCIVLMQALAT- 182
A + E+S F Q F Q+I+E + RIH+ID + G LMQ LA+
Sbjct: 347 IAAYRSFSETSPFLQFVNFTANQSILESCNESGFDRIHIIDFDVGYGGQWSSLMQELASG 406
Query: 183 ---RQECPVELLKITAVGS-----SSKQRMEETGKRLAYFAETWNLPFSFKIVLVTETKD 234
R+ LK+T S + + T + L FA +PF +++ V +
Sbjct: 407 VGGRRRNRASSLKLTVFAPPPSTVSDEFELRFTEENLKTFAGEVKIPFEIELLSVELLLN 466
Query: 235 LNEDKFDLNAGE--AVAVYSPILLSRTRHPDFLIKMLRKISPCVMVIIEVEANHNSQNFE 292
L + E A+AV P+ + + +++ L+++SP ++V + + N F
Sbjct: 467 PAYWPLSLRSSEKEAIAVNLPVNSVASGYLPLILRFLKQLSPNIVVCSDRGCDRNDAPFP 526
Query: 293 DRFFEVLFHYSASFDCLKVSMARCDPERVTFEEMYLGQHIRNIIATEGEERIFRHMKIDA 352
+ L ++++ + L + + D + E ++ I ++ RH I+
Sbjct: 527 NAVIHSLQYHTSLLESLDANQNQDDS---SIERFWVQPSIEKLLMK-------RHRWIER 576
Query: 353 ---WRKFFHRFGMVEAELSTSSLFQAELVIKNFAFASYLTLDRNGQCLIVGWKGSPQLSL 409
WR F + G A LS + QAE +++ + +++ L++ W+ +++
Sbjct: 577 SPPWRILFTQCGFSPASLSQMAEAQAECLLQRNPVRGF-HVEKRQSSLVMCWQRKELVTV 635
Query: 410 SVW 412
S W
Sbjct: 636 SAW 638
>TAIR|locus:2184625 [details] [associations]
symbol:SCL8 "AT5G52510" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
Pfam:PF03514 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AP000378 EMBL:AF036305
EMBL:AY099686 EMBL:AY128868 IPI:IPI00531227 PIR:T51239
RefSeq:NP_200064.3 UniGene:At.22412 UniGene:At.71617 STRING:Q9FYR7
PRIDE:Q9FYR7 EnsemblPlants:AT5G52510.1 GeneID:835327
KEGG:ath:AT5G52510 GeneFarm:4234 TAIR:At5g52510 eggNOG:NOG240925
HOGENOM:HOG000239354 InParanoid:Q9FYR7 OMA:PGAPWRD PhylomeDB:Q9FYR7
ProtClustDB:CLSN2680518 Genevestigator:Q9FYR7 Uniprot:Q9FYR7
Length = 640
Score = 159 (61.0 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 58/227 (25%), Positives = 95/227 (41%)
Query: 196 VGSSSKQRMEETGKRLAYFAETWNLPFSFKIVLVTETKDLNEDKFDLNAGEAVAVYSPIL 255
V ++R++ G L+ + + SF +V DLN + + E +AV
Sbjct: 418 VDDGGEERLKAVGDLLSQLGDRLGISVSFNVVTSLRLGDLNRESLGCDPDETLAVNLAFK 477
Query: 256 LSR-------TRHP-DFLIKMLRKISPCVMVIIEVEANHNSQNFEDRFFEVLFHYSASFD 307
L R T +P D L++ ++ + P V+ ++E E N N+ F R E Y A +
Sbjct: 478 LYRVPDESVCTENPRDELLRRVKGLKPRVVTLVEQEMNSNTAPFLGRVSESCACYGALLE 537
Query: 308 CLKVSMARCDPERVTFEEMYLGQHIRNIIATEGEERIFRHMKIDAWRKFFHRFGMVEAEL 367
++ ++ + +R EE +G+ + N +A EG +RI R WR R M EL
Sbjct: 538 SVESTVPSTNSDRAKVEEG-IGRKLVNAVACEGIDRIERCEVFGKWRM---RMSMAGFEL 593
Query: 368 STSSLFQAELVIK--NFAFASYLTLDRNGQCLIVGWKGSPQLSLSVW 412
S AE + N + + NG + GW G S W
Sbjct: 594 MPLSEKIAESMKSRGNRVHPGFTVKEDNGG-VCFGWMGRALTVASAW 639
>TAIR|locus:1009023400 [details] [associations]
symbol:AT5G67411 "AT5G67411" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0006351 EMBL:AB007645
InterPro:IPR005202 PROSITE:PS50985 EMBL:DQ487622 IPI:IPI00657013
RefSeq:NP_001032167.1 UniGene:At.65711 EnsemblPlants:AT5G67411.1
GeneID:3771574 KEGG:ath:AT5G67411 TAIR:At5g67411 eggNOG:NOG309215
PhylomeDB:Q2V2T9 Genevestigator:Q2V2T9 Uniprot:Q2V2T9
Length = 202
Score = 124 (48.7 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 47/159 (29%), Positives = 76/159 (47%)
Query: 205 EETGKRLAYFAETWNLPFSFKIV-------LVTETKDLNEDKFDLNAGEAVAV------- 250
EE G +L FA T N+ F+I+ L + + L D F N EA+ V
Sbjct: 44 EELGSKLVNFATTRNVAMEFRIISSSYSDGLSSLIEQLRIDPFVFN--EALVVNCHMMLH 101
Query: 251 YSP--ILLSRTRHPDFLIKMLRKISPCVMVIIEVEANHNSQNFEDRFFEVLFHYS-ASFD 307
Y P IL S R +K LR ++P ++ +I+ +++ S NF R L++Y +D
Sbjct: 102 YIPDEILTSNLR--SVFLKELRDLNPTIVTLIDEDSDFTSTNFISRL-RSLYNYMWIPYD 158
Query: 308 CLKVSMARCDPERVTFEEMYLGQHIRNIIATEGEERIFR 346
++ + R +R +E + I N++A EG ER+ R
Sbjct: 159 TAEMFLTRGSEQRQWYEAD-ISWKIDNVVAKEGAERVER 196
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.135 0.395 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 412 398 0.00097 117 3 11 22 0.47 33
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 32
No. of states in DFA: 621 (66 KB)
Total size of DFA: 246 KB (2132 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 34.54u 0.09s 34.63t Elapsed: 00:00:01
Total cpu time: 34.55u 0.09s 34.64t Elapsed: 00:00:01
Start: Mon May 20 20:46:13 2013 End: Mon May 20 20:46:14 2013