Query 048129
Match_columns 412
No_of_seqs 122 out of 701
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 11:06:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048129.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048129hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gek_A TRNA (CMO5U34)-methyltr 97.6 0.0011 3.8E-08 63.0 14.5 109 158-283 70-180 (261)
2 3dtn_A Putative methyltransfer 96.1 0.019 6.6E-07 52.0 9.2 177 148-367 33-211 (234)
3 3dlc_A Putative S-adenosyl-L-m 94.9 0.29 9.8E-06 43.1 12.0 110 147-281 33-147 (219)
4 3bkx_A SAM-dependent methyltra 94.7 2.1 7.2E-05 39.2 17.9 123 149-289 34-167 (275)
5 2aot_A HMT, histamine N-methyl 94.7 0.91 3.1E-05 42.7 15.6 118 157-280 51-170 (292)
6 1vl5_A Unknown conserved prote 94.7 0.97 3.3E-05 41.4 15.4 106 150-280 29-138 (260)
7 3htx_A HEN1; HEN1, small RNA m 94.6 0.33 1.1E-05 53.6 13.4 127 148-287 711-840 (950)
8 3dh0_A SAM dependent methyltra 94.6 2.3 7.8E-05 37.5 17.7 112 148-281 27-142 (219)
9 3dp7_A SAM-dependent methyltra 94.4 0.74 2.5E-05 45.0 14.6 117 149-284 170-290 (363)
10 3hnr_A Probable methyltransfer 94.1 0.49 1.7E-05 42.0 11.6 109 148-281 35-144 (220)
11 3ujc_A Phosphoethanolamine N-m 93.9 0.43 1.5E-05 43.5 11.2 120 139-281 36-158 (266)
12 2r3s_A Uncharacterized protein 93.9 1.2 4E-05 42.5 14.6 116 148-285 153-275 (335)
13 1kpg_A CFA synthase;, cyclopro 93.5 4.6 0.00016 37.3 19.4 109 149-280 55-166 (287)
14 4a6d_A Hydroxyindole O-methylt 93.5 0.46 1.6E-05 46.5 11.1 160 147-367 168-331 (353)
15 3mgg_A Methyltransferase; NYSG 92.8 2 6.7E-05 39.6 14.0 104 157-281 36-141 (276)
16 3gwz_A MMCR; methyltransferase 92.8 2.1 7.1E-05 41.9 14.8 115 148-284 192-310 (369)
17 4fsd_A Arsenic methyltransfera 92.7 1.7 5.8E-05 42.8 14.1 114 158-284 83-206 (383)
18 3jwg_A HEN1, methyltransferase 92.5 1.1 3.7E-05 39.8 11.3 121 148-287 19-146 (219)
19 3h2b_A SAM-dependent methyltra 92.4 1.2 4.1E-05 38.9 11.4 96 159-281 42-140 (203)
20 3jwh_A HEN1; methyltransferase 92.4 0.68 2.3E-05 41.2 9.7 116 149-283 20-142 (217)
21 2ip2_A Probable phenazine-spec 92.3 1.7 5.7E-05 41.6 13.1 115 148-283 158-274 (334)
22 3mcz_A O-methyltransferase; ad 92.1 4.1 0.00014 39.0 15.7 116 149-283 169-289 (352)
23 3m70_A Tellurite resistance pr 91.7 1.7 6E-05 40.3 12.2 115 148-284 110-225 (286)
24 1qzz_A RDMB, aclacinomycin-10- 91.7 2.1 7.1E-05 41.5 13.1 113 148-282 172-288 (374)
25 1x19_A CRTF-related protein; m 91.4 2.2 7.5E-05 41.3 12.9 115 148-284 180-298 (359)
26 3f4k_A Putative methyltransfer 91.2 6.9 0.00024 35.2 15.4 112 145-281 32-149 (257)
27 1xxl_A YCGJ protein; structura 90.9 8.8 0.0003 34.5 17.3 106 150-280 13-122 (239)
28 3i53_A O-methyltransferase; CO 90.4 5.4 0.00019 38.0 14.5 102 157-280 168-272 (332)
29 1tw3_A COMT, carminomycin 4-O- 90.4 3.2 0.00011 40.0 13.0 114 148-283 173-290 (360)
30 2fk8_A Methoxy mycolic acid sy 90.3 9.7 0.00033 35.7 16.1 110 148-280 80-192 (318)
31 3e23_A Uncharacterized protein 90.3 1.3 4.6E-05 38.9 9.4 96 159-281 44-140 (211)
32 2xvm_A Tellurite resistance pr 89.7 5.3 0.00018 34.2 12.7 111 148-280 22-134 (199)
33 3bus_A REBM, methyltransferase 89.2 13 0.00043 33.8 16.3 109 148-280 51-164 (273)
34 4dcm_A Ribosomal RNA large sub 88.8 3.2 0.00011 41.0 11.8 117 146-282 210-334 (375)
35 3sm3_A SAM-dependent methyltra 88.7 2.5 8.5E-05 37.4 10.0 101 159-280 31-139 (235)
36 1dus_A MJ0882; hypothetical pr 88.6 2.3 7.8E-05 36.2 9.3 115 148-285 42-160 (194)
37 3hem_A Cyclopropane-fatty-acyl 88.6 16 0.00053 34.1 19.3 111 148-281 62-182 (302)
38 3reo_A (ISO)eugenol O-methyltr 88.4 5.1 0.00017 39.1 12.9 107 149-283 193-302 (368)
39 3p9c_A Caffeic acid O-methyltr 88.2 2.2 7.4E-05 41.8 10.0 108 148-283 190-300 (364)
40 3cgg_A SAM-dependent methyltra 88.1 3.8 0.00013 34.8 10.5 108 149-282 38-147 (195)
41 3dli_A Methyltransferase; PSI- 87.8 1 3.4E-05 40.8 6.8 98 158-281 41-139 (240)
42 1xtp_A LMAJ004091AAA; SGPP, st 87.1 4.9 0.00017 36.1 11.0 112 148-282 83-197 (254)
43 3vc1_A Geranyl diphosphate 2-C 87.0 17 0.00059 34.0 15.3 110 148-280 106-219 (312)
44 3ofk_A Nodulation protein S; N 86.4 3.4 0.00012 36.3 9.4 111 149-282 42-154 (216)
45 3r0q_C Probable protein argini 86.4 3.5 0.00012 40.6 10.4 145 148-314 53-208 (376)
46 3ocj_A Putative exported prote 85.9 2.9 9.9E-05 39.4 9.2 105 158-281 118-226 (305)
47 3g5l_A Putative S-adenosylmeth 85.8 11 0.00037 33.9 12.7 110 146-281 32-144 (253)
48 3e8s_A Putative SAM dependent 85.3 3.7 0.00013 36.0 9.0 112 145-282 39-152 (227)
49 3hm2_A Precorrin-6Y C5,15-meth 85.0 10 0.00035 31.8 11.5 110 149-281 16-126 (178)
50 1ve3_A Hypothetical protein PH 84.9 11 0.00038 32.9 12.1 102 159-281 39-141 (227)
51 3l8d_A Methyltransferase; stru 84.8 13 0.00045 32.9 12.6 100 158-282 53-153 (242)
52 2p35_A Trans-aconitate 2-methy 84.3 10 0.00035 34.0 11.8 108 149-282 24-132 (259)
53 1wzn_A SAM-dependent methyltra 84.2 5.9 0.0002 35.6 10.1 104 157-282 40-145 (252)
54 3mq2_A 16S rRNA methyltransfer 83.8 3.5 0.00012 36.4 8.2 114 152-282 21-140 (218)
55 3lst_A CALO1 methyltransferase 83.4 4 0.00014 39.3 9.1 110 148-282 174-287 (348)
56 3p9n_A Possible methyltransfer 82.7 4.6 0.00016 34.9 8.4 111 158-287 44-158 (189)
57 3uwp_A Histone-lysine N-methyl 82.6 4.3 0.00015 41.3 9.1 120 148-280 163-286 (438)
58 2yxd_A Probable cobalt-precorr 82.3 7.3 0.00025 32.7 9.4 104 150-282 27-131 (183)
59 3lcc_A Putative methyl chlorid 80.4 11 0.00036 33.6 10.2 101 160-280 68-169 (235)
60 2vdw_A Vaccinia virus capping 80.2 22 0.00077 33.6 12.9 107 159-281 49-168 (302)
61 3q7e_A Protein arginine N-meth 79.5 10 0.00035 36.7 10.4 116 148-284 56-175 (349)
62 2ift_A Putative methylase HI07 79.3 14 0.00047 32.4 10.5 106 160-286 55-167 (201)
63 3e05_A Precorrin-6Y C5,15-meth 79.3 14 0.00048 32.1 10.4 109 149-281 31-141 (204)
64 1wy7_A Hypothetical protein PH 79.2 28 0.00097 30.0 12.5 93 158-273 49-141 (207)
65 2y1w_A Histone-arginine methyl 79.2 10 0.00036 36.6 10.4 112 148-281 40-154 (348)
66 3kkz_A Uncharacterized protein 79.1 21 0.00072 32.4 12.0 112 145-281 32-149 (267)
67 3g2m_A PCZA361.24; SAM-depende 79.0 2.5 8.4E-05 39.7 5.6 116 148-282 73-190 (299)
68 3thr_A Glycine N-methyltransfe 78.7 5.9 0.0002 36.6 8.1 118 148-281 47-174 (293)
69 3ou2_A SAM-dependent methyltra 78.5 9.1 0.00031 33.2 8.9 109 147-281 34-145 (218)
70 2pjd_A Ribosomal RNA small sub 78.4 3.9 0.00014 39.5 7.0 116 146-282 184-303 (343)
71 1y8c_A S-adenosylmethionine-de 78.0 7.7 0.00026 34.4 8.4 103 158-282 37-142 (246)
72 3adn_A Spermidine synthase; am 77.9 14 0.00047 35.1 10.6 135 159-310 84-223 (294)
73 3ccf_A Cyclopropane-fatty-acyl 77.9 21 0.00073 32.6 11.7 108 148-283 47-155 (279)
74 3ege_A Putative methyltransfer 77.7 5.2 0.00018 36.6 7.4 115 148-291 24-140 (261)
75 3eey_A Putative rRNA methylase 77.4 9.8 0.00034 32.8 8.7 104 160-281 24-138 (197)
76 3m33_A Uncharacterized protein 77.2 11 0.00038 33.5 9.3 41 159-210 49-89 (226)
77 2fpo_A Methylase YHHF; structu 76.6 7.6 0.00026 34.2 7.9 105 160-286 56-164 (202)
78 3u81_A Catechol O-methyltransf 76.5 11 0.00038 33.4 9.0 110 158-284 58-172 (221)
79 2fyt_A Protein arginine N-meth 76.5 18 0.00063 34.8 11.2 111 148-279 54-168 (340)
80 2o57_A Putative sarcosine dime 76.3 33 0.0011 31.5 12.6 114 148-284 68-190 (297)
81 1fp2_A Isoflavone O-methyltran 76.1 32 0.0011 32.9 12.8 99 158-284 188-291 (352)
82 1zg3_A Isoflavanone 4'-O-methy 75.9 32 0.0011 32.9 12.8 108 149-284 182-296 (358)
83 1g6q_1 HnRNP arginine N-methyl 75.5 19 0.00064 34.4 10.9 113 148-281 28-144 (328)
84 3giw_A Protein of unknown func 75.3 14 0.00048 35.2 9.7 142 128-281 44-199 (277)
85 3fzg_A 16S rRNA methylase; met 74.5 4.8 0.00016 36.7 5.9 102 160-282 51-152 (200)
86 3gu3_A Methyltransferase; alph 74.3 53 0.0018 30.1 17.3 103 157-280 21-124 (284)
87 3bgv_A MRNA CAP guanine-N7 met 74.3 47 0.0016 30.9 13.3 111 158-281 34-154 (313)
88 1fp1_D Isoliquiritigenin 2'-O- 74.2 18 0.00062 34.9 10.6 108 148-283 198-308 (372)
89 3b3j_A Histone-arginine methyl 74.0 5.5 0.00019 40.8 7.0 113 148-282 148-263 (480)
90 2pt6_A Spermidine synthase; tr 73.5 5.9 0.0002 38.2 6.7 113 159-285 117-233 (321)
91 3bwc_A Spermidine synthase; SA 73.5 13 0.00046 35.2 9.2 112 159-283 96-211 (304)
92 3frh_A 16S rRNA methylase; met 73.4 6.4 0.00022 37.1 6.6 100 159-282 106-206 (253)
93 3i9f_A Putative type 11 methyl 73.3 24 0.00082 29.3 9.9 50 150-210 9-58 (170)
94 3njr_A Precorrin-6Y methylase; 73.2 31 0.001 30.3 11.0 104 149-281 46-153 (204)
95 4hc4_A Protein arginine N-meth 72.9 14 0.00047 36.7 9.3 99 161-279 86-186 (376)
96 1ws6_A Methyltransferase; stru 72.8 11 0.00037 31.3 7.6 107 158-287 41-152 (171)
97 4htf_A S-adenosylmethionine-de 72.6 30 0.001 31.7 11.2 101 159-281 69-172 (285)
98 2kw5_A SLR1183 protein; struct 72.6 38 0.0013 29.0 11.3 99 161-282 32-131 (202)
99 1nkv_A Hypothetical protein YJ 72.5 24 0.00084 31.4 10.4 109 149-280 27-138 (256)
100 1inl_A Spermidine synthase; be 72.2 16 0.00054 34.5 9.3 134 159-309 91-229 (296)
101 3g5t_A Trans-aconitate 3-methy 72.2 25 0.00084 32.6 10.6 111 157-280 35-147 (299)
102 2o07_A Spermidine synthase; st 72.1 13 0.00045 35.4 8.8 134 159-309 96-233 (304)
103 3pfg_A N-methyltransferase; N, 70.5 11 0.00039 34.1 7.7 98 158-281 50-150 (263)
104 1yzh_A TRNA (guanine-N(7)-)-me 70.5 31 0.0011 30.1 10.4 109 158-283 41-157 (214)
105 1uwv_A 23S rRNA (uracil-5-)-me 69.6 44 0.0015 33.3 12.4 109 150-281 278-388 (433)
106 2esr_A Methyltransferase; stru 69.3 15 0.00053 30.9 7.8 107 159-287 32-143 (177)
107 1nv8_A HEMK protein; class I a 69.2 32 0.0011 32.2 10.7 109 158-285 123-252 (284)
108 3mti_A RRNA methylase; SAM-dep 68.5 23 0.00079 30.0 8.8 102 160-281 24-134 (185)
109 3d2l_A SAM-dependent methyltra 68.2 19 0.00064 31.8 8.5 100 160-282 35-137 (243)
110 2p7i_A Hypothetical protein; p 68.2 23 0.00078 31.1 9.0 105 148-281 31-140 (250)
111 2i7c_A Spermidine synthase; tr 68.0 8.8 0.0003 36.1 6.5 112 159-284 79-194 (283)
112 1iy9_A Spermidine synthase; ro 67.9 22 0.00076 33.1 9.2 133 159-308 76-212 (275)
113 2zfu_A Nucleomethylin, cerebra 67.7 23 0.0008 30.8 8.9 19 349-367 158-176 (215)
114 3q87_B N6 adenine specific DNA 66.5 32 0.0011 29.1 9.4 89 161-281 26-122 (170)
115 3lcv_B Sisomicin-gentamicin re 65.7 20 0.00067 34.3 8.3 132 149-309 125-258 (281)
116 3dxy_A TRNA (guanine-N(7)-)-me 65.6 19 0.00065 32.3 8.0 108 158-283 34-151 (218)
117 3p2e_A 16S rRNA methylase; met 65.3 34 0.0012 30.7 9.7 107 158-281 24-138 (225)
118 3evz_A Methyltransferase; NYSG 65.2 27 0.00093 30.7 8.9 105 158-281 55-178 (230)
119 2yqz_A Hypothetical protein TT 65.0 75 0.0026 28.1 13.7 100 157-281 38-140 (263)
120 1mjf_A Spermidine synthase; sp 64.9 11 0.00039 35.2 6.6 109 159-284 76-195 (281)
121 1ri5_A MRNA capping enzyme; me 64.7 44 0.0015 30.3 10.6 108 158-282 64-174 (298)
122 2p8j_A S-adenosylmethionine-de 64.5 25 0.00087 30.1 8.4 101 159-281 24-127 (209)
123 1uir_A Polyamine aminopropyltr 63.8 22 0.00074 33.9 8.4 110 159-282 78-195 (314)
124 3iv6_A Putative Zn-dependent a 63.7 9.3 0.00032 35.9 5.6 109 148-281 35-147 (261)
125 1xj5_A Spermidine synthase 1; 63.6 30 0.001 33.4 9.5 117 158-287 120-240 (334)
126 2qe6_A Uncharacterized protein 63.3 93 0.0032 28.7 16.2 133 131-281 46-195 (274)
127 2jjq_A Uncharacterized RNA met 62.7 84 0.0029 31.3 12.9 95 160-281 292-386 (425)
128 3bkw_A MLL3908 protein, S-aden 62.2 51 0.0018 28.8 10.2 108 148-281 33-143 (243)
129 1u2z_A Histone-lysine N-methyl 61.9 34 0.0012 34.5 9.8 119 148-281 232-358 (433)
130 2ex4_A Adrenal gland protein A 61.4 32 0.0011 30.5 8.7 114 146-280 62-183 (241)
131 2vdv_E TRNA (guanine-N(7)-)-me 60.9 92 0.0031 27.8 12.5 48 158-214 49-96 (246)
132 3ggd_A SAM-dependent methyltra 60.8 20 0.00068 31.9 7.2 105 159-283 57-165 (245)
133 2qm3_A Predicted methyltransfe 60.3 99 0.0034 29.8 12.7 97 159-276 173-271 (373)
134 2b3t_A Protein methyltransfera 59.2 51 0.0017 30.1 9.9 105 157-281 108-237 (276)
135 2fhp_A Methylase, putative; al 59.0 20 0.00068 30.2 6.6 109 159-287 45-159 (187)
136 3dmg_A Probable ribosomal RNA 58.2 76 0.0026 31.1 11.5 105 158-283 233-341 (381)
137 1vlm_A SAM-dependent methyltra 57.0 97 0.0033 26.8 13.1 23 347-369 165-187 (219)
138 4e2x_A TCAB9; kijanose, tetron 56.7 19 0.00066 35.2 6.8 108 149-282 98-208 (416)
139 2b2c_A Spermidine synthase; be 56.5 14 0.00048 35.5 5.6 134 159-309 109-246 (314)
140 3grz_A L11 mtase, ribosomal pr 55.7 26 0.0009 30.2 6.9 68 145-226 45-115 (205)
141 1ne2_A Hypothetical protein TA 55.5 32 0.0011 29.6 7.4 89 158-273 51-139 (200)
142 2g72_A Phenylethanolamine N-me 55.0 40 0.0014 31.0 8.4 44 158-211 71-114 (289)
143 1o9g_A RRNA methyltransferase; 53.3 26 0.00088 31.6 6.6 55 151-212 44-98 (250)
144 3g07_A 7SK snRNA methylphospha 53.0 18 0.0006 33.8 5.6 56 150-214 36-93 (292)
145 2gb4_A Thiopurine S-methyltran 52.1 90 0.0031 28.5 10.3 40 157-207 67-106 (252)
146 2ozv_A Hypothetical protein AT 50.8 59 0.002 29.6 8.8 123 148-283 25-171 (260)
147 3fut_A Dimethyladenosine trans 49.6 33 0.0011 32.2 6.9 85 149-256 38-122 (271)
148 3mb5_A SAM-dependent methyltra 49.3 64 0.0022 28.7 8.7 108 149-281 84-193 (255)
149 3id6_C Fibrillarin-like rRNA/T 47.4 1.5E+02 0.0051 26.9 10.9 111 149-281 64-180 (232)
150 3cc8_A Putative methyltransfer 46.8 95 0.0032 26.6 9.2 105 147-281 22-129 (230)
151 2avn_A Ubiquinone/menaquinone 46.8 1.6E+02 0.0054 26.3 11.8 94 158-281 54-151 (260)
152 3tm4_A TRNA (guanine N2-)-meth 46.5 97 0.0033 30.0 10.0 105 157-280 216-329 (373)
153 1zq9_A Probable dimethyladenos 46.0 1.1E+02 0.0037 28.3 10.0 85 149-256 19-105 (285)
154 4hg2_A Methyltransferase type 44.5 1.9E+02 0.0063 26.4 11.2 98 161-287 42-141 (257)
155 1l3i_A Precorrin-6Y methyltran 44.5 57 0.002 27.0 7.1 103 151-280 26-132 (192)
156 3tfw_A Putative O-methyltransf 44.3 53 0.0018 29.6 7.3 104 159-282 64-170 (248)
157 2yxe_A Protein-L-isoaspartate 43.5 51 0.0017 28.5 6.8 57 149-213 68-124 (215)
158 4azs_A Methyltransferase WBDD; 43.1 33 0.0011 35.5 6.3 56 158-228 66-122 (569)
159 2i62_A Nicotinamide N-methyltr 42.6 69 0.0024 28.4 7.7 45 157-211 55-99 (265)
160 1o54_A SAM-dependent O-methylt 42.5 79 0.0027 28.8 8.2 109 149-282 103-213 (277)
161 2qn6_B Translation initiation 42.1 22 0.00076 28.2 3.7 39 186-225 50-91 (93)
162 2gpy_A O-methyltransferase; st 42.0 72 0.0025 28.0 7.7 102 159-281 55-159 (233)
163 2kl8_A OR15; structural genomi 41.3 47 0.0016 24.7 5.0 34 190-226 43-76 (85)
164 4dzr_A Protein-(glutamine-N5) 41.1 26 0.00088 30.0 4.4 52 150-210 21-73 (215)
165 1jsx_A Glucose-inhibited divis 40.4 46 0.0016 28.5 5.9 97 159-281 66-164 (207)
166 3tqs_A Ribosomal RNA small sub 39.9 81 0.0028 29.1 7.8 52 149-211 20-71 (255)
167 3ftd_A Dimethyladenosine trans 39.8 74 0.0025 29.1 7.5 108 149-283 22-132 (249)
168 2pxx_A Uncharacterized protein 39.6 68 0.0023 27.3 6.9 45 157-211 41-85 (215)
169 3g89_A Ribosomal RNA small sub 39.4 47 0.0016 30.3 6.1 101 158-280 80-182 (249)
170 1zx0_A Guanidinoacetate N-meth 38.8 1.7E+02 0.0058 25.6 9.7 103 158-280 60-168 (236)
171 3bxo_A N,N-dimethyltransferase 37.2 2E+02 0.0069 24.7 9.9 97 157-281 39-140 (239)
172 3gru_A Dimethyladenosine trans 36.5 1.2E+02 0.0041 28.7 8.6 86 149-256 41-126 (295)
173 3gjy_A Spermidine synthase; AP 35.8 88 0.003 30.1 7.6 110 158-283 89-201 (317)
174 3tma_A Methyltransferase; thum 34.4 2.1E+02 0.0072 27.0 10.2 109 150-276 195-311 (354)
175 2gs9_A Hypothetical protein TT 34.3 1.7E+02 0.0058 24.8 8.7 100 150-281 29-131 (211)
176 2f8l_A Hypothetical protein LM 33.9 3E+02 0.01 25.8 13.5 110 157-281 129-255 (344)
177 1dl5_A Protein-L-isoaspartate 33.9 66 0.0022 30.2 6.3 108 149-281 66-174 (317)
178 1qam_A ERMC' methyltransferase 33.7 47 0.0016 30.2 5.0 53 148-211 20-72 (244)
179 1i1n_A Protein-L-isoaspartate 33.4 88 0.003 27.2 6.7 57 149-213 66-124 (226)
180 2ipx_A RRNA 2'-O-methyltransfe 32.3 2.3E+02 0.008 24.6 9.5 101 159-281 78-181 (233)
181 5nul_A Flavodoxin; electron tr 32.1 1.9E+02 0.0065 23.0 8.6 70 204-280 12-85 (138)
182 2frn_A Hypothetical protein PH 31.8 3E+02 0.01 25.1 11.8 96 160-282 127-225 (278)
183 3fpf_A Mtnas, putative unchara 31.4 3.4E+02 0.012 25.7 14.6 99 158-282 122-222 (298)
184 1pjz_A Thiopurine S-methyltran 31.2 75 0.0026 27.5 5.8 42 158-210 22-63 (203)
185 2pwy_A TRNA (adenine-N(1)-)-me 30.9 1E+02 0.0035 27.2 6.8 57 149-213 87-143 (258)
186 2ksn_A Ubiquitin domain-contai 30.9 64 0.0022 27.4 4.8 37 43-80 57-93 (137)
187 2b25_A Hypothetical protein; s 30.4 74 0.0025 30.0 6.0 68 140-215 87-154 (336)
188 1i9g_A Hypothetical protein RV 30.3 1.1E+02 0.0036 27.6 6.9 59 148-214 89-147 (280)
189 3lpm_A Putative methyltransfer 29.6 1.2E+02 0.0042 27.1 7.2 79 158-254 49-129 (259)
190 3ckk_A TRNA (guanine-N(7)-)-me 29.3 84 0.0029 28.3 6.0 50 156-214 44-93 (235)
191 2h00_A Methyltransferase 10 do 29.2 79 0.0027 28.2 5.8 56 158-226 65-122 (254)
192 3lbf_A Protein-L-isoaspartate 29.0 1E+02 0.0035 26.4 6.3 105 150-282 69-174 (210)
193 2pbf_A Protein-L-isoaspartate 28.8 1.2E+02 0.0042 26.2 6.8 61 149-213 69-131 (227)
194 2nxc_A L11 mtase, ribosomal pr 28.3 77 0.0026 28.7 5.6 96 158-280 120-216 (254)
195 1r18_A Protein-L-isoaspartate( 28.0 1.6E+02 0.0054 25.6 7.5 53 159-214 85-137 (227)
196 2h1r_A Dimethyladenosine trans 28.0 1.1E+02 0.0038 28.6 6.8 86 148-256 32-118 (299)
197 4hhu_A OR280; engineered prote 27.8 82 0.0028 26.2 4.9 40 190-233 125-164 (170)
198 3dr5_A Putative O-methyltransf 27.1 80 0.0027 28.1 5.3 105 156-281 54-162 (221)
199 3tva_A Xylose isomerase domain 26.9 52 0.0018 30.0 4.1 52 261-312 239-290 (290)
200 3ghf_A Septum site-determining 26.4 1.1E+02 0.0036 25.1 5.5 50 160-222 49-99 (120)
201 1m6y_A S-adenosyl-methyltransf 26.0 59 0.002 30.9 4.4 47 159-214 27-73 (301)
202 1yb2_A Hypothetical protein TA 24.0 95 0.0032 28.3 5.3 107 149-281 101-210 (275)
203 3tr6_A O-methyltransferase; ce 23.7 85 0.0029 27.2 4.8 103 159-282 65-174 (225)
204 1in0_A YAJQ protein, HI1034; a 23.6 77 0.0026 27.7 4.2 33 190-227 129-161 (163)
205 4f3n_A Uncharacterized ACR, CO 22.6 1.6E+02 0.0055 29.6 7.0 54 141-198 121-174 (432)
206 3gdh_A Trimethylguanosine synt 21.6 1.7E+02 0.0059 25.5 6.5 54 158-226 78-133 (241)
207 2qy6_A UPF0209 protein YFCK; s 21.0 2.2E+02 0.0077 26.1 7.3 43 156-198 58-104 (257)
208 1jg1_A PIMT;, protein-L-isoasp 21.0 1.3E+02 0.0046 26.3 5.6 108 149-283 82-190 (235)
209 1vbf_A 231AA long hypothetical 20.8 1.3E+02 0.0044 26.1 5.4 105 149-282 61-165 (231)
210 1xdz_A Methyltransferase GIDB; 20.8 1.8E+02 0.0062 25.6 6.5 100 159-281 71-173 (240)
211 3uzu_A Ribosomal RNA small sub 20.7 1.5E+02 0.005 27.7 6.0 55 149-210 33-87 (279)
212 1p91_A Ribosomal RNA large sub 20.0 1.3E+02 0.0044 26.8 5.3 43 157-208 84-126 (269)
No 1
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=97.58 E-value=0.0011 Score=62.95 Aligned_cols=109 Identities=13% Similarity=0.189 Sum_probs=66.5
Q ss_pred CeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCCCCcc
Q 048129 158 KRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVLVTETKDLNE 237 (412)
Q Consensus 158 ~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~~~~~e~l~~ 237 (412)
..-+|+|+|.|.|. +...|+.+-+. | ..+||||+. +...++.+.+++.++- .+.+++|.. .+..++.
T Consensus 70 ~~~~vLDlGcGtG~----~~~~la~~~~~-~-~~~v~gvD~-s~~ml~~A~~~~~~~~--~~~~v~~~~---~D~~~~~- 136 (261)
T 4gek_A 70 PGTQVYDLGCSLGA----ATLSVRRNIHH-D-NCKIIAIDN-SPAMIERCRRHIDAYK--APTPVDVIE---GDIRDIA- 136 (261)
T ss_dssp TTCEEEEETCTTTH----HHHHHHHTCCS-S-SCEEEEEES-CHHHHHHHHHHHHTSC--CSSCEEEEE---SCTTTCC-
T ss_pred CCCEEEEEeCCCCH----HHHHHHHhcCC-C-CCEEEEEEC-CHHHHHHHHHHHHhhc--cCceEEEee---ccccccc-
Confidence 34579999999884 45566766433 3 489999997 6666777776654322 223445433 3344433
Q ss_pred ccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEE-eec
Q 048129 238 DKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVII-EVE 283 (412)
Q Consensus 238 ~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~-E~e 283 (412)
..+-..++.|+.++.-.+..+..+|+.| |.|+|.-..++ |.-
T Consensus 137 ----~~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~ 180 (261)
T 4gek_A 137 ----IENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKF 180 (261)
T ss_dssp ----CCSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred ----ccccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEecc
Confidence 2233566666655543344556778777 77999876554 543
No 2
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=96.15 E-value=0.019 Score=52.04 Aligned_cols=177 Identities=10% Similarity=0.058 Sum_probs=89.7
Q ss_pred HHHHhhhh-cCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEE
Q 048129 148 QAIIERVA-SAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKI 226 (412)
Q Consensus 148 qaIleA~~-g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~ 226 (412)
+.+++.+. ..+.-+|+|+|.|.|. +...|+.+. | ..++|||+. +...++.+.+++ +..+ ..+|..
T Consensus 33 ~~~~~~~~~~~~~~~vLDiG~G~G~----~~~~l~~~~---~-~~~v~~vD~-s~~~~~~a~~~~----~~~~-~~~~~~ 98 (234)
T 3dtn_A 33 GVSVSIASVDTENPDILDLGAGTGL----LSAFLMEKY---P-EATFTLVDM-SEKMLEIAKNRF----RGNL-KVKYIE 98 (234)
T ss_dssp HHHHHTCCCSCSSCEEEEETCTTSH----HHHHHHHHC---T-TCEEEEEES-CHHHHHHHHHHT----CSCT-TEEEEE
T ss_pred HHHHHHhhcCCCCCeEEEecCCCCH----HHHHHHHhC---C-CCeEEEEEC-CHHHHHHHHHhh----ccCC-CEEEEe
Confidence 56666665 4566899999999884 344455442 2 378999987 545555554443 2233 444443
Q ss_pred eecCCCCCCccccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEEeecCcCCCCchHHHHHHHHHHHHHH
Q 048129 227 VLVTETKDLNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVIIEVEANHNSQNFEDRFFEVLFHYSAS 305 (412)
Q Consensus 227 v~~~~~e~l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~E~ea~~n~~~F~~RF~eaL~~Ysal 305 (412)
- +..++... ..=+.|+.+..+.--....+..+|+.+ +.|+|.-.+++-.-...+.+.+.......+.. .
T Consensus 99 ~---d~~~~~~~----~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~---~ 168 (234)
T 3dtn_A 99 A---DYSKYDFE----EKYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQ---Y 168 (234)
T ss_dssp S---CTTTCCCC----SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHH---H
T ss_pred C---chhccCCC----CCceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHHHHH---H
Confidence 2 33333321 122344444333322222233466665 66899877765433333333333222221111 1
Q ss_pred HHHhhhhcCCCCHHHHHHHHHHHhHHHHHhHhhccccccccccchhHHHHHHHhCCCeeecC
Q 048129 306 FDCLKVSMARCDPERVTFEEMYLGQHIRNIIATEGEERIFRHMKIDAWRKFFHRFGMVEAEL 367 (412)
Q Consensus 306 FdsLda~~~~~~~~R~~iE~~~lg~eI~niVa~eG~~R~eR~e~~~~W~~r~~~aGF~~~~l 367 (412)
+ .. .. -+. . ++.+..... ...+.-+.+.|...|+.|||+.+..
T Consensus 169 ~---~~-~~-~~~--~---------~~~~~~~~~---~~~~~~~~~~~~~ll~~aGF~~v~~ 211 (234)
T 3dtn_A 169 V---EN-SG-LTE--E---------EIAAGYERS---KLDKDIEMNQQLNWLKEAGFRDVSC 211 (234)
T ss_dssp H---HT-SS-CCH--H---------HHHTTC-------CCCCCBHHHHHHHHHHTTCEEEEE
T ss_pred H---Hh-cC-CCH--H---------HHHHHHHhc---ccccccCHHHHHHHHHHcCCCceee
Confidence 1 11 11 111 1 122221111 2345567789999999999998755
No 3
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=94.89 E-value=0.29 Score=43.11 Aligned_cols=110 Identities=18% Similarity=0.183 Sum_probs=63.2
Q ss_pred hHHHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc--EEE
Q 048129 147 TQAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP--FSF 224 (412)
Q Consensus 147 NqaIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~--Fef 224 (412)
.+.+++.+..... +|+|+|.|.|. +...|+.+ | ..++|||+. +...++.+.+++ +..|+. .+|
T Consensus 33 ~~~~~~~~~~~~~-~vLdiG~G~G~----~~~~l~~~----~-~~~v~~~D~-s~~~~~~a~~~~----~~~~~~~~~~~ 97 (219)
T 3dlc_A 33 AENIINRFGITAG-TCIDIGSGPGA----LSIALAKQ----S-DFSIRALDF-SKHMNEIALKNI----ADANLNDRIQI 97 (219)
T ss_dssp HHHHHHHHCCCEE-EEEEETCTTSH----HHHHHHHH----S-EEEEEEEES-CHHHHHHHHHHH----HHTTCTTTEEE
T ss_pred HHHHHHhcCCCCC-EEEEECCCCCH----HHHHHHHc----C-CCeEEEEEC-CHHHHHHHHHHH----HhccccCceEE
Confidence 3556666654445 99999999985 45556655 2 378999987 555565555544 344553 555
Q ss_pred EEeecCCCCCCccccccCCCC--ceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEEe
Q 048129 225 KIVLVTETKDLNEDKFDLNAG--EAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVIIE 281 (412)
Q Consensus 225 ~~v~~~~~e~l~~~~l~~~~~--E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~E 281 (412)
.... ..++. ..++ +.|+.+..+.- ......+|+.+ +.|+|.-.+++.
T Consensus 98 ~~~d---~~~~~-----~~~~~~D~v~~~~~l~~--~~~~~~~l~~~~~~L~pgG~l~~~ 147 (219)
T 3dlc_A 98 VQGD---VHNIP-----IEDNYADLIVSRGSVFF--WEDVATAFREIYRILKSGGKTYIG 147 (219)
T ss_dssp EECB---TTBCS-----SCTTCEEEEEEESCGGG--CSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEcC---HHHCC-----CCcccccEEEECchHhh--ccCHHHHHHHHHHhCCCCCEEEEE
Confidence 4432 33322 2222 34444433222 23445566655 678998777664
No 4
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=94.70 E-value=2.1 Score=39.25 Aligned_cols=123 Identities=13% Similarity=0.128 Sum_probs=65.7
Q ss_pred HHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCCh-----HHHHHHHHHHHHHHHhcCCc--
Q 048129 149 AIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSK-----QRMEETGKRLAYFAETWNLP-- 221 (412)
Q Consensus 149 aIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~-----~~l~~tg~rL~~fA~~lgv~-- 221 (412)
.|++.+.-.+.-+|+|+|.|.|.- ...|+.+. || ..++|||+.... ..++.+.+++. ..|++
T Consensus 34 ~l~~~~~~~~~~~vLDiGcG~G~~----~~~l~~~~-g~--~~~v~gvD~s~~~~~~~~~~~~a~~~~~----~~~~~~~ 102 (275)
T 3bkx_A 34 AIAEAWQVKPGEKILEIGCGQGDL----SAVLADQV-GS--SGHVTGIDIASPDYGAPLTLGQAWNHLL----AGPLGDR 102 (275)
T ss_dssp HHHHHHTCCTTCEEEEESCTTSHH----HHHHHHHH-CT--TCEEEEECSSCTTCCSSSCHHHHHHHHH----TSTTGGG
T ss_pred HHHHHcCCCCCCEEEEeCCCCCHH----HHHHHHHh-CC--CCEEEEEECCccccccHHHHHHHHHHHH----hcCCCCc
Confidence 556665544556899999998853 34444442 33 368999987432 14555555543 34442
Q ss_pred EEEEEeecCCCCCCccccccCC--CCceEEEeeccccCCCCchHHHHHHHHhcCC--CEEEEEeecCcCCCC
Q 048129 222 FSFKIVLVTETKDLNEDKFDLN--AGEAVAVYSPILLSRTRHPDFLIKMLRKISP--CVMVIIEVEANHNSQ 289 (412)
Q Consensus 222 Fef~~v~~~~~e~l~~~~l~~~--~~E~laVn~~~~L~~~~~~~~~L~~vr~L~P--~vvvl~E~ea~~n~~ 289 (412)
.+|... + ++....+... .=+.|+.+.++.- .++ .+.+++.++.|.| ..+++.+...+.+.+
T Consensus 103 v~~~~~--d---~~~~~~~~~~~~~fD~v~~~~~l~~-~~~-~~~~~~~~~~l~~~gG~l~~~~~~~~~~~~ 167 (275)
T 3bkx_A 103 LTVHFN--T---NLSDDLGPIADQHFDRVVLAHSLWY-FAS-ANALALLFKNMAAVCDHVDVAEWSMQPTAL 167 (275)
T ss_dssp EEEECS--C---CTTTCCGGGTTCCCSEEEEESCGGG-SSC-HHHHHHHHHHHTTTCSEEEEEEECSSCSSG
T ss_pred eEEEEC--C---hhhhccCCCCCCCEEEEEEccchhh-CCC-HHHHHHHHHHHhCCCCEEEEEEecCCCCch
Confidence 444332 1 1111111112 2245554444322 222 2458899999887 456666766655443
No 5
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=94.67 E-value=0.91 Score=42.67 Aligned_cols=118 Identities=9% Similarity=0.110 Sum_probs=61.0
Q ss_pred CCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCCCCc
Q 048129 157 AKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVLVTETKDLN 236 (412)
Q Consensus 157 ~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~~~~~e~l~ 236 (412)
....+|+|+|.|.|.--..+++.|+.+. |.-.+.+|||++ +...++.+.+++.+...--++.|+|... ..+++.
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~--~~~~v~~~~vD~-S~~ml~~a~~~~~~~~~~~~v~~~~~~~---~~~~~~ 124 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQY--PGVCINNEVVEP-SAEQIAKYKELVAKTSNLENVKFAWHKE---TSSEYQ 124 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHS--TTCEEEEEEECS-CHHHHHHHHHHHHTCSSCTTEEEEEECS---CHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhC--CCceeeEEEEeC-CHHHHHHHHHHHHhccCCCcceEEEEec---chhhhh
Confidence 4567999999999964445777777653 211234599987 6666666665543211111344544432 222221
Q ss_pred ccc-ccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEE
Q 048129 237 EDK-FDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVII 280 (412)
Q Consensus 237 ~~~-l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~ 280 (412)
... ....++..=+|-|...|..-...+.+|+.+ |-|+|.-.+++
T Consensus 125 ~~~~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i 170 (292)
T 2aot_A 125 SRMLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLI 170 (292)
T ss_dssp HHHHTTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEE
T ss_pred hhhccccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEE
Confidence 100 001122232334444442223345566666 55799966655
No 6
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=94.65 E-value=0.97 Score=41.37 Aligned_cols=106 Identities=10% Similarity=0.118 Sum_probs=59.0
Q ss_pred HHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc-EEEEEee
Q 048129 150 IIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP-FSFKIVL 228 (412)
Q Consensus 150 IleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~-Fef~~v~ 228 (412)
|++.+.-...-+|+|+|.|.|. +...|+.+. + ++|||+. +...++.+.+++ +..|++ .+|..-
T Consensus 29 l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~--~----~v~gvD~-s~~~l~~a~~~~----~~~~~~~v~~~~~- 92 (260)
T 1vl5_A 29 LMQIAALKGNEEVLDVATGGGH----VANAFAPFV--K----KVVAFDL-TEDILKVARAFI----EGNGHQQVEYVQG- 92 (260)
T ss_dssp HHHHHTCCSCCEEEEETCTTCH----HHHHHGGGS--S----EEEEEES-CHHHHHHHHHHH----HHTTCCSEEEEEC-
T ss_pred HHHHhCCCCCCEEEEEeCCCCH----HHHHHHHhC--C----EEEEEeC-CHHHHHHHHHHH----HhcCCCceEEEEe-
Confidence 4444544455689999999885 556677663 2 7999987 555565555443 344554 555433
Q ss_pred cCCCCCCccccccCCCC--ceEEEeeccccCCCCchHHHHHH-HHhcCCCEEEEE
Q 048129 229 VTETKDLNEDKFDLNAG--EAVAVYSPILLSRTRHPDFLIKM-LRKISPCVMVII 280 (412)
Q Consensus 229 ~~~~e~l~~~~l~~~~~--E~laVn~~~~L~~~~~~~~~L~~-vr~L~P~vvvl~ 280 (412)
+.+++. ..++ +.|+.+..+. ..+++ ..+|+. .|.|+|.-.+++
T Consensus 93 --d~~~l~-----~~~~~fD~V~~~~~l~-~~~d~-~~~l~~~~r~LkpgG~l~~ 138 (260)
T 1vl5_A 93 --DAEQMP-----FTDERFHIVTCRIAAH-HFPNP-ASFVSEAYRVLKKGGQLLL 138 (260)
T ss_dssp --CC-CCC-----SCTTCEEEEEEESCGG-GCSCH-HHHHHHHHHHEEEEEEEEE
T ss_pred --cHHhCC-----CCCCCEEEEEEhhhhH-hcCCH-HHHHHHHHHHcCCCCEEEE
Confidence 333332 2222 3444333322 22333 455554 477899876665
No 7
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=94.56 E-value=0.33 Score=53.57 Aligned_cols=127 Identities=17% Similarity=0.169 Sum_probs=75.6
Q ss_pred HHHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHH--HHhcCCcEEEE
Q 048129 148 QAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYF--AETWNLPFSFK 225 (412)
Q Consensus 148 qaIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~f--A~~lgv~Fef~ 225 (412)
+.|++.+.....-.|+|+|.|.|. +...|+.+ ++| .-+||||+. +...++.+.++|... ++..|++ ..+
T Consensus 711 e~LLelL~~~~g~rVLDVGCGTG~----lai~LAr~--g~p-~a~VtGVDI-S~emLe~AReRLa~~lnAkr~gl~-nVe 781 (950)
T 3htx_A 711 EYALKHIRESSASTLVDFGCGSGS----LLDSLLDY--PTS-LQTIIGVDI-SPKGLARAAKMLHVKLNKEACNVK-SAT 781 (950)
T ss_dssp HHHHHHHHHSCCSEEEEETCSSSH----HHHHHTSS--CCC-CCEEEEEES-CHHHHHHHHHHHHHHTTTTCSSCS-EEE
T ss_pred HHHHHHhcccCCCEEEEECCCCCH----HHHHHHHh--CCC-CCeEEEEEC-CHHHHHHHHHHhhhccchhhcCCC-ceE
Confidence 345555555566689999999984 45666655 333 378999997 667788888887765 2234554 333
Q ss_pred EeecCCCCCCccccccCCCCceEEEeeccccCCCCchHHHHHH-HHhcCCCEEEEEeecCcCC
Q 048129 226 IVLVTETKDLNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKM-LRKISPCVMVIIEVEANHN 287 (412)
Q Consensus 226 ~v~~~~~e~l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~-vr~L~P~vvvl~E~ea~~n 287 (412)
.+. .++.++... ...=++|+.+..+.--.+.....+++. .+.|+|.++++...+.++|
T Consensus 782 fiq-GDa~dLp~~---d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG~LIISTPN~eyN 840 (950)
T 3htx_A 782 LYD-GSILEFDSR---LHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPKLLIVSTPNYEFN 840 (950)
T ss_dssp EEE-SCTTSCCTT---SCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCSEEEEEECBGGGH
T ss_pred EEE-CchHhCCcc---cCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCCEEEEEecCchhh
Confidence 333 344444321 122245555444432222233456655 5889999777777766554
No 8
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=94.56 E-value=2.3 Score=37.51 Aligned_cols=112 Identities=11% Similarity=0.129 Sum_probs=62.1
Q ss_pred HHHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc-EEEEE
Q 048129 148 QAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP-FSFKI 226 (412)
Q Consensus 148 qaIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~-Fef~~ 226 (412)
+.|++.+.-...-.|+|+|.|.|.--..|.+.. +| ..++|||+. +...++.+.+++. ..|++ ++|..
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~------~~-~~~v~~vD~-s~~~~~~a~~~~~----~~~~~~~~~~~ 94 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMV------GE-KGKVYAIDV-QEEMVNYAWEKVN----KLGLKNVEVLK 94 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHH------TT-TCEEEEEES-CHHHHHHHHHHHH----HHTCTTEEEEE
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHh------CC-CcEEEEEEC-CHHHHHHHHHHHH----HcCCCcEEEEe
Confidence 556666654556689999999986443333332 23 378999987 5555666655543 34554 55544
Q ss_pred eecCCCCCCccccccCCCC--ceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEEe
Q 048129 227 VLVTETKDLNEDKFDLNAG--EAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVIIE 281 (412)
Q Consensus 227 v~~~~~e~l~~~~l~~~~~--E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~E 281 (412)
.. ..++. ..++ +.|+.+..+. ..+ ....+|+.+ +.|+|.-.+++.
T Consensus 95 ~d---~~~~~-----~~~~~fD~v~~~~~l~-~~~-~~~~~l~~~~~~LkpgG~l~i~ 142 (219)
T 3dh0_A 95 SE---ENKIP-----LPDNTVDFIFMAFTFH-ELS-EPLKFLEELKRVAKPFAYLAII 142 (219)
T ss_dssp CB---TTBCS-----SCSSCEEEEEEESCGG-GCS-SHHHHHHHHHHHEEEEEEEEEE
T ss_pred cc---cccCC-----CCCCCeeEEEeehhhh-hcC-CHHHHHHHHHHHhCCCeEEEEE
Confidence 32 33322 1222 3444333322 222 345566655 778998666653
No 9
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=94.36 E-value=0.74 Score=45.05 Aligned_cols=117 Identities=15% Similarity=0.041 Sum_probs=64.1
Q ss_pred HHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCC--cEEEEE
Q 048129 149 AIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNL--PFSFKI 226 (412)
Q Consensus 149 aIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv--~Fef~~ 226 (412)
.+++.+-....-+|+|+|.|.|. +...|+.+. | .+++|+++. ...++.+.++ ++..|+ ..+|..
T Consensus 170 ~~l~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p-~~~~~~~D~--~~~~~~a~~~----~~~~~~~~~v~~~~ 235 (363)
T 3dp7_A 170 KALEIVFSHHPKRLLDIGGNTGK----WATQCVQYN---K-EVEVTIVDL--PQQLEMMRKQ----TAGLSGSERIHGHG 235 (363)
T ss_dssp HHHHHHGGGCCSEEEEESCTTCH----HHHHHHHHS---T-TCEEEEEEC--HHHHHHHHHH----HTTCTTGGGEEEEE
T ss_pred HHHHHhcccCCCEEEEeCCCcCH----HHHHHHHhC---C-CCEEEEEeC--HHHHHHHHHH----HHhcCcccceEEEE
Confidence 34454444456799999999885 445565552 3 479999986 3445544444 344555 366655
Q ss_pred eecCCCCCCccccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEE-EeecC
Q 048129 227 VLVTETKDLNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVI-IEVEA 284 (412)
Q Consensus 227 v~~~~~e~l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl-~E~ea 284 (412)
-. ..+... .+. ..-++++.+..+.--.......+|+.+ +.|+|.-.++ +|.-.
T Consensus 236 ~d---~~~~~~-~~p-~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 290 (363)
T 3dp7_A 236 AN---LLDRDV-PFP-TGFDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLW 290 (363)
T ss_dssp CC---CCSSSC-CCC-CCCSEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCT
T ss_pred cc---ccccCC-CCC-CCcCEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeecc
Confidence 32 222110 011 223566655555432223344677766 6689987554 45433
No 10
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=94.07 E-value=0.49 Score=42.03 Aligned_cols=109 Identities=8% Similarity=0.116 Sum_probs=59.6
Q ss_pred HHHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEe
Q 048129 148 QAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIV 227 (412)
Q Consensus 148 qaIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v 227 (412)
..+++.+...+.-.|+|+|.|.|. +...|+.+ + .++|||+. +...++.+.+++. -++. |..
T Consensus 35 ~~~l~~~~~~~~~~vLDiGcG~G~----~~~~l~~~--~----~~v~~vD~-s~~~~~~a~~~~~-----~~~~--~~~- 95 (220)
T 3hnr_A 35 EDILEDVVNKSFGNVLEFGVGTGN----LTNKLLLA--G----RTVYGIEP-SREMRMIAKEKLP-----KEFS--ITE- 95 (220)
T ss_dssp HHHHHHHHHTCCSEEEEECCTTSH----HHHHHHHT--T----CEEEEECS-CHHHHHHHHHHSC-----TTCC--EES-
T ss_pred HHHHHHhhccCCCeEEEeCCCCCH----HHHHHHhC--C----CeEEEEeC-CHHHHHHHHHhCC-----CceE--EEe-
Confidence 456666665567799999999884 55566666 2 47999987 4444554444322 1232 322
Q ss_pred ecCCCCCCccccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEEe
Q 048129 228 LVTETKDLNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVIIE 281 (412)
Q Consensus 228 ~~~~~e~l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~E 281 (412)
.+..++... ..=+.|+.+..+.--.......+|+.+ +.|+|.-.+++.
T Consensus 96 --~d~~~~~~~----~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 144 (220)
T 3hnr_A 96 --GDFLSFEVP----TSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFA 144 (220)
T ss_dssp --CCSSSCCCC----SCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred --CChhhcCCC----CCeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEE
Confidence 233333221 233455555444321111122355555 778998666654
No 11
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=93.93 E-value=0.43 Score=43.47 Aligned_cols=120 Identities=9% Similarity=0.115 Sum_probs=62.8
Q ss_pred hhHHHHHhhHHHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhc
Q 048129 139 YQATLFAGTQAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETW 218 (412)
Q Consensus 139 ~~fa~~taNqaIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~l 218 (412)
+.-+.......+++.+.-...-+|+|+|.|.|. +...|+.+. + .++|||+. +...++.+.+++...
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~~-~----~~v~~vD~-s~~~~~~a~~~~~~~---- 101 (266)
T 3ujc_A 36 ISSGGLEATKKILSDIELNENSKVLDIGSGLGG----GCMYINEKY-G----AHTHGIDI-CSNIVNMANERVSGN---- 101 (266)
T ss_dssp CSTTHHHHHHHHTTTCCCCTTCEEEEETCTTSH----HHHHHHHHH-C----CEEEEEES-CHHHHHHHHHTCCSC----
T ss_pred cccchHHHHHHHHHhcCCCCCCEEEEECCCCCH----HHHHHHHHc-C----CEEEEEeC-CHHHHHHHHHHhhcC----
Confidence 333333445667777765566799999999884 344455443 1 47999987 444444443332211
Q ss_pred CCcEEEEEeecCCCCCCccccccCCCC--ceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEEe
Q 048129 219 NLPFSFKIVLVTETKDLNEDKFDLNAG--EAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVIIE 281 (412)
Q Consensus 219 gv~Fef~~v~~~~~e~l~~~~l~~~~~--E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~E 281 (412)
-..+|... +..++. ..++ +.|+.+..+.--.+.....+|+.+ +.|+|.-.+++.
T Consensus 102 -~~~~~~~~---d~~~~~-----~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 158 (266)
T 3ujc_A 102 -NKIIFEAN---DILTKE-----FPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLIT 158 (266)
T ss_dssp -TTEEEEEC---CTTTCC-----CCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -CCeEEEEC---ccccCC-----CCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEE
Confidence 23444443 233321 1122 344433333222224445666655 678997665553
No 12
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=93.86 E-value=1.2 Score=42.50 Aligned_cols=116 Identities=11% Similarity=0.118 Sum_probs=65.8
Q ss_pred HHHHhhhhc--CCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc--EE
Q 048129 148 QAIIERVAS--AKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP--FS 223 (412)
Q Consensus 148 qaIleA~~g--~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~--Fe 223 (412)
..|++.+.. .+..+|+|+|.|.|. +...|+.+. | ..++|+++. + ..++.+.+++.+ .|++ .+
T Consensus 153 ~~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p-~~~~~~~D~-~-~~~~~a~~~~~~----~~~~~~v~ 218 (335)
T 2r3s_A 153 QLIAQLVNENKIEPLKVLDISASHGL----FGIAVAQHN---P-NAEIFGVDW-A-SVLEVAKENARI----QGVASRYH 218 (335)
T ss_dssp HHHHHHHTC--CCCSEEEEETCTTCH----HHHHHHHHC---T-TCEEEEEEC-H-HHHHHHHHHHHH----HTCGGGEE
T ss_pred HHHHHhcccccCCCCEEEEECCCcCH----HHHHHHHHC---C-CCeEEEEec-H-HHHHHHHHHHHh----cCCCcceE
Confidence 356666654 667899999999994 445555553 3 379999987 4 666666665543 3443 56
Q ss_pred EEEeecCCCCCCccccccCCCC-ceEEEeeccccCCCCchHHHHHHH-HhcCCCE-EEEEeecCc
Q 048129 224 FKIVLVTETKDLNEDKFDLNAG-EAVAVYSPILLSRTRHPDFLIKML-RKISPCV-MVIIEVEAN 285 (412)
Q Consensus 224 f~~v~~~~~e~l~~~~l~~~~~-E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~v-vvl~E~ea~ 285 (412)
|.... ..+.. ...+ +.++.+..+.--.......+|+.+ +.|+|.- ++++|...+
T Consensus 219 ~~~~d---~~~~~-----~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 275 (335)
T 2r3s_A 219 TIAGS---AFEVD-----YGNDYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPN 275 (335)
T ss_dssp EEESC---TTTSC-----CCSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCC
T ss_pred EEecc---cccCC-----CCCCCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCC
Confidence 65432 22221 1111 344443333222222334666665 6689987 555565443
No 13
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=93.50 E-value=4.6 Score=37.27 Aligned_cols=109 Identities=7% Similarity=0.115 Sum_probs=59.8
Q ss_pred HHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc--EEEEE
Q 048129 149 AIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP--FSFKI 226 (412)
Q Consensus 149 aIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~--Fef~~ 226 (412)
.|++.+.-...-+|+|+|.|.|. +...|+.+.+ .++|||+. +...++.+.+++ +..|++ .+|..
T Consensus 55 ~~~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~~-----~~v~gvd~-s~~~~~~a~~~~----~~~~~~~~~~~~~ 120 (287)
T 1kpg_A 55 LALGKLGLQPGMTLLDVGCGWGA----TMMRAVEKYD-----VNVVGLTL-SKNQANHVQQLV----ANSENLRSKRVLL 120 (287)
T ss_dssp HHHTTTTCCTTCEEEEETCTTSH----HHHHHHHHHC-----CEEEEEES-CHHHHHHHHHHH----HTCCCCSCEEEEE
T ss_pred HHHHHcCCCCcCEEEEECCcccH----HHHHHHHHcC-----CEEEEEEC-CHHHHHHHHHHH----HhcCCCCCeEEEE
Confidence 45555554556689999998775 4555554431 27999987 545555554443 444543 44433
Q ss_pred eecCCCCCCccccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEE
Q 048129 227 VLVTETKDLNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVII 280 (412)
Q Consensus 227 v~~~~~e~l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~ 280 (412)
.+.+++. ..=+.|+.+.++.--.+.....+|+.+ +.|+|.-.+++
T Consensus 121 ---~d~~~~~------~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 166 (287)
T 1kpg_A 121 ---AGWEQFD------EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLL 166 (287)
T ss_dssp ---SCGGGCC------CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEE
T ss_pred ---CChhhCC------CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEE
Confidence 2333332 222445444443332223445566655 67899866655
No 14
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=93.46 E-value=0.46 Score=46.50 Aligned_cols=160 Identities=13% Similarity=0.134 Sum_probs=86.5
Q ss_pred hHHHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEE
Q 048129 147 TQAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKI 226 (412)
Q Consensus 147 NqaIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~ 226 (412)
.+.|++++.-...-+|+|+|-|.|. +..+|+++. | .+|+|..+.+ +.++.+.+++. ....=..+|.+
T Consensus 168 ~~~~~~~~~~~~~~~v~DvGgG~G~----~~~~l~~~~---p-~~~~~~~dlp--~v~~~a~~~~~---~~~~~rv~~~~ 234 (353)
T 4a6d_A 168 GRSVLTAFDLSVFPLMCDLGGGAGA----LAKECMSLY---P-GCKITVFDIP--EVVWTAKQHFS---FQEEEQIDFQE 234 (353)
T ss_dssp HHHHHHSSCGGGCSEEEEETCTTSH----HHHHHHHHC---S-SCEEEEEECH--HHHHHHHHHSC---C--CCSEEEEE
T ss_pred HHHHHHhcCcccCCeEEeeCCCCCH----HHHHHHHhC---C-CceeEeccCH--HHHHHHHHhhh---hcccCceeeec
Confidence 3567776654445589999999995 566777664 3 5899988752 34444443331 11111255554
Q ss_pred eecCCCCCCccccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCE-EEEEeecCcC--CCCchHHHHHHHHHHH
Q 048129 227 VLVTETKDLNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCV-MVIIEVEANH--NSQNFEDRFFEVLFHY 302 (412)
Q Consensus 227 v~~~~~e~l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~v-vvl~E~ea~~--n~~~F~~RF~eaL~~Y 302 (412)
-. -.++ .....++++....++--.......+|+.+ +.|+|.- ++++|.-.+. +.|.+
T Consensus 235 gD--~~~~------~~~~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~----------- 295 (353)
T 4a6d_A 235 GD--FFKD------PLPEADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLL----------- 295 (353)
T ss_dssp SC--TTTS------CCCCCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHH-----------
T ss_pred Cc--cccC------CCCCceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHH-----------
Confidence 32 1111 12234566555554432233344667766 6799976 4445643322 22211
Q ss_pred HHHHHHhhhhcCCCCHHHHHHHHHHHhHHHHHhHhhccccccccccchhHHHHHHHhCCCeeecC
Q 048129 303 SASFDCLKVSMARCDPERVTFEEMYLGQHIRNIIATEGEERIFRHMKIDAWRKFFHRFGMVEAEL 367 (412)
Q Consensus 303 salFdsLda~~~~~~~~R~~iE~~~lg~eI~niVa~eG~~R~eR~e~~~~W~~r~~~aGF~~~~l 367 (412)
.++|| +.=.+.+.|.+| +.++|+..+++|||+.+.+
T Consensus 296 ~~~~d------------------------l~ml~~~~g~er-----t~~e~~~ll~~AGf~~v~v 331 (353)
T 4a6d_A 296 TQLYS------------------------LNMLVQTEGQER-----TPTHYHMLLSSAGFRDFQF 331 (353)
T ss_dssp HHHHH------------------------HHHHHSSSCCCC-----CHHHHHHHHHHHTCEEEEE
T ss_pred HHHHH------------------------HHHHHhCCCcCC-----CHHHHHHHHHHCCCceEEE
Confidence 01111 111133456555 3489999999999998765
No 15
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=92.84 E-value=2 Score=39.57 Aligned_cols=104 Identities=15% Similarity=0.233 Sum_probs=56.3
Q ss_pred CCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc-EEEEEeecCCCCCC
Q 048129 157 AKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP-FSFKIVLVTETKDL 235 (412)
Q Consensus 157 ~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~-Fef~~v~~~~~e~l 235 (412)
.+.-+|+|+|.|.|. +...|+.+ +| ..++|||+. +...++.+.++ ++..|++ .+|..- +..++
T Consensus 36 ~~~~~vLDiG~G~G~----~~~~l~~~--~~--~~~v~~vD~-s~~~~~~a~~~----~~~~~~~~~~~~~~---d~~~~ 99 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGA----QTVILAKN--NP--DAEITSIDI-SPESLEKAREN----TEKNGIKNVKFLQA---NIFSL 99 (276)
T ss_dssp CTTCEEEETTCTTSH----HHHHHHHH--CT--TSEEEEEES-CHHHHHHHHHH----HHHTTCCSEEEEEC---CGGGC
T ss_pred CCCCeEEEecCCCCH----HHHHHHHh--CC--CCEEEEEEC-CHHHHHHHHHH----HHHcCCCCcEEEEc---ccccC
Confidence 345689999999884 44555555 23 268999987 54555554444 3445554 444432 23322
Q ss_pred ccccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEEe
Q 048129 236 NEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVIIE 281 (412)
Q Consensus 236 ~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~E 281 (412)
. ..++..=+|-+...+..-...+.+|+.+ +.|+|.-++++.
T Consensus 100 ~-----~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (276)
T 3mgg_A 100 P-----FEDSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVI 141 (276)
T ss_dssp C-----SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred C-----CCCCCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEE
Confidence 2 2223222333333332222334566665 678998766653
No 16
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=92.84 E-value=2.1 Score=41.86 Aligned_cols=115 Identities=12% Similarity=0.061 Sum_probs=64.0
Q ss_pred HHHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCC--cEEEE
Q 048129 148 QAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNL--PFSFK 225 (412)
Q Consensus 148 qaIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv--~Fef~ 225 (412)
..|++.+.-.+..+|+|+|.|.|. +...|+.+. | .+++|+++. ...++.+.+++. ..|+ ..+|.
T Consensus 192 ~~l~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~--p--~~~~~~~D~--~~~~~~a~~~~~----~~~l~~~v~~~ 257 (369)
T 3gwz_A 192 GQVAAAYDFSGAATAVDIGGGRGS----LMAAVLDAF--P--GLRGTLLER--PPVAEEARELLT----GRGLADRCEIL 257 (369)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSH----HHHHHHHHC--T--TCEEEEEEC--HHHHHHHHHHHH----HTTCTTTEEEE
T ss_pred HHHHHhCCCccCcEEEEeCCCccH----HHHHHHHHC--C--CCeEEEEcC--HHHHHHHHHhhh----hcCcCCceEEe
Confidence 345555544567899999999995 555566552 3 488999986 345555555543 3444 36666
Q ss_pred EeecCCCCCCccccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEE-eecC
Q 048129 226 IVLVTETKDLNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVII-EVEA 284 (412)
Q Consensus 226 ~v~~~~~e~l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~-E~ea 284 (412)
.-.+ .+.+ + . .-++++.+..+.--.......+|+.+ +.|+|.-.+++ |.-.
T Consensus 258 ~~d~--~~~~-p----~-~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~ 310 (369)
T 3gwz_A 258 PGDF--FETI-P----D-GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLI 310 (369)
T ss_dssp ECCT--TTCC-C----S-SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBC
T ss_pred ccCC--CCCC-C----C-CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 5432 1111 1 1 23455554444332222233577766 56899765544 5443
No 17
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=92.74 E-value=1.7 Score=42.79 Aligned_cols=114 Identities=18% Similarity=0.146 Sum_probs=65.6
Q ss_pred CeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhc-C----CcEEEEEeecCCC
Q 048129 158 KRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETW-N----LPFSFKIVLVTET 232 (412)
Q Consensus 158 ~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~l-g----v~Fef~~v~~~~~ 232 (412)
+.-+|+|+|.|.|.-= ..|+.+- +| ..++|||+. +...++.+.+++.+.+... | -..+|..-. +
T Consensus 83 ~~~~VLDlGcG~G~~~----~~la~~~-~~--~~~v~gvD~-s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d---~ 151 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDV----YLASKLV-GE--HGKVIGVDM-LDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGF---I 151 (383)
T ss_dssp TTCEEEEESCTTSHHH----HHHHHHH-TT--TCEEEEEEC-CHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESC---T
T ss_pred CCCEEEEecCccCHHH----HHHHHHh-CC--CCEEEEEEC-CHHHHHHHHHHHHHhhhhcccccCCCceEEEEcc---H
Confidence 4568999999998533 3333331 22 268999997 6677888888887776654 4 345555433 3
Q ss_pred CCCccc-cccCCCC--ceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEE-eecC
Q 048129 233 KDLNED-KFDLNAG--EAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVII-EVEA 284 (412)
Q Consensus 233 e~l~~~-~l~~~~~--E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~-E~ea 284 (412)
+++... .....++ +.|+.|..+.. .++ ...+|+.+ +.|+|.-.+++ +...
T Consensus 152 ~~l~~~~~~~~~~~~fD~V~~~~~l~~-~~d-~~~~l~~~~r~LkpgG~l~i~~~~~ 206 (383)
T 4fsd_A 152 ENLATAEPEGVPDSSVDIVISNCVCNL-STN-KLALFKEIHRVLRDGGELYFSDVYA 206 (383)
T ss_dssp TCGGGCBSCCCCTTCEEEEEEESCGGG-CSC-HHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred HHhhhcccCCCCCCCEEEEEEccchhc-CCC-HHHHHHHHHHHcCCCCEEEEEEecc
Confidence 333211 0012222 45666655544 223 44566655 78899876665 4433
No 18
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=92.51 E-value=1.1 Score=39.81 Aligned_cols=121 Identities=19% Similarity=0.182 Sum_probs=67.9
Q ss_pred HHHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCC------c
Q 048129 148 QAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNL------P 221 (412)
Q Consensus 148 qaIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv------~ 221 (412)
+.|++.+...+.-.|+|+|.|.|. +...|+.+ +| ..++|||+. +...++.+.+++. ..++ .
T Consensus 19 ~~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~--~~--~~~v~gvD~-s~~~~~~a~~~~~----~~~~~~~~~~~ 85 (219)
T 3jwg_A 19 GTVVAVLKSVNAKKVIDLGCGEGN----LLSLLLKD--KS--FEQITGVDV-SYSVLERAKDRLK----IDRLPEMQRKR 85 (219)
T ss_dssp HHHHHHHHHTTCCEEEEETCTTCH----HHHHHHTS--TT--CCEEEEEES-CHHHHHHHHHHHT----GGGSCHHHHTT
T ss_pred HHHHHHHhhcCCCEEEEecCCCCH----HHHHHHhc--CC--CCEEEEEEC-CHHHHHHHHHHHH----hhccccccCcc
Confidence 344455554555689999999886 55666665 33 378999997 5555666655542 2222 3
Q ss_pred EEEEEeecCCCCCCccccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEEeecCcCC
Q 048129 222 FSFKIVLVTETKDLNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVIIEVEANHN 287 (412)
Q Consensus 222 Fef~~v~~~~~e~l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~E~ea~~n 287 (412)
++|..- ++..+... ...=+.|+.+..+.--....+..+|+.+ +.|+|.-++++.....+|
T Consensus 86 v~~~~~---d~~~~~~~---~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~ 146 (219)
T 3jwg_A 86 ISLFQS---SLVYRDKR---FSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYN 146 (219)
T ss_dssp EEEEEC---CSSSCCGG---GTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGG
T ss_pred eEEEeC---cccccccc---cCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhh
Confidence 444433 23222211 1122455544333322222345667666 678999988877765554
No 19
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=92.43 E-value=1.2 Score=38.91 Aligned_cols=96 Identities=10% Similarity=0.107 Sum_probs=53.3
Q ss_pred eeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCCCCccc
Q 048129 159 RIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVLVTETKDLNED 238 (412)
Q Consensus 159 ~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~~~~~e~l~~~ 238 (412)
.-.|+|+|.|.|. +...|+.+ | .++|||+. +...++.+.++ .-..+|.. .+..++.
T Consensus 42 ~~~vLDiGcG~G~----~~~~l~~~--~----~~v~gvD~-s~~~~~~a~~~--------~~~~~~~~---~d~~~~~-- 97 (203)
T 3h2b_A 42 DGVILDVGSGTGR----WTGHLASL--G----HQIEGLEP-ATRLVELARQT--------HPSVTFHH---GTITDLS-- 97 (203)
T ss_dssp CSCEEEETCTTCH----HHHHHHHT--T----CCEEEECC-CHHHHHHHHHH--------CTTSEEEC---CCGGGGG--
T ss_pred CCeEEEecCCCCH----HHHHHHhc--C----CeEEEEeC-CHHHHHHHHHh--------CCCCeEEe---Ccccccc--
Confidence 5689999999986 55666666 2 36999987 54545544443 11233322 2333322
Q ss_pred cccCCCC--ceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEEe
Q 048129 239 KFDLNAG--EAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVIIE 281 (412)
Q Consensus 239 ~l~~~~~--E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~E 281 (412)
..++ +.|+.+..+.--.......+|+.+ +.|+|.-.+++.
T Consensus 98 ---~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 140 (203)
T 3h2b_A 98 ---DSPKRWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMS 140 (203)
T ss_dssp ---GSCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEE
T ss_pred ---cCCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 2222 344443333322334555666665 678998766654
No 20
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=92.36 E-value=0.68 Score=41.19 Aligned_cols=116 Identities=16% Similarity=0.217 Sum_probs=65.7
Q ss_pred HHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCC------cE
Q 048129 149 AIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNL------PF 222 (412)
Q Consensus 149 aIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv------~F 222 (412)
.|++.+...+.-.|+|+|.|.|. +...|+.+ +| ..++|||+. +...++.+.+++ +..|+ ..
T Consensus 20 ~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~--~~--~~~v~gvD~-s~~~~~~a~~~~----~~~~~~~~~~~~v 86 (217)
T 3jwh_A 20 GVVAALKQSNARRVIDLGCGQGN----LLKILLKD--SF--FEQITGVDV-SYRSLEIAQERL----DRLRLPRNQWERL 86 (217)
T ss_dssp HHHHHHHHTTCCEEEEETCTTCH----HHHHHHHC--TT--CSEEEEEES-CHHHHHHHHHHH----TTCCCCHHHHTTE
T ss_pred HHHHHHHhcCCCEEEEeCCCCCH----HHHHHHhh--CC--CCEEEEEEC-CHHHHHHHHHHH----HHhcCCcccCcce
Confidence 34444444455689999999885 55566665 23 368999987 555566555543 33444 34
Q ss_pred EEEEeecCCCCCCccccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEEeec
Q 048129 223 SFKIVLVTETKDLNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVIIEVE 283 (412)
Q Consensus 223 ef~~v~~~~~e~l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~E~e 283 (412)
+|..- ++..+... ...=+.|+.+..+.--.......+|+.+ +.|+|.-++++...
T Consensus 87 ~~~~~---d~~~~~~~---~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 87 QLIQG---ALTYQDKR---FHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp EEEEC---CTTSCCGG---GCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred EEEeC---Cccccccc---CCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccC
Confidence 55433 23222211 1222455554444332223446777766 56899998877655
No 21
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=92.32 E-value=1.7 Score=41.58 Aligned_cols=115 Identities=12% Similarity=0.000 Sum_probs=61.4
Q ss_pred HHHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEe
Q 048129 148 QAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIV 227 (412)
Q Consensus 148 qaIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v 227 (412)
..|++.+.-.. .+|+|+|.|.|. +...|+.+. | .+++|+++. + ..++.+.+++.+.- +.-.++|..-
T Consensus 158 ~~~~~~~~~~~-~~vlDvG~G~G~----~~~~l~~~~---p-~~~~~~~D~-~-~~~~~a~~~~~~~~--~~~~v~~~~~ 224 (334)
T 2ip2_A 158 HEIPRLLDFRG-RSFVDVGGGSGE----LTKAILQAE---P-SARGVMLDR-E-GSLGVARDNLSSLL--AGERVSLVGG 224 (334)
T ss_dssp HHHHHHSCCTT-CEEEEETCTTCH----HHHHHHHHC---T-TCEEEEEEC-T-TCTHHHHHHTHHHH--HTTSEEEEES
T ss_pred HHHHHhCCCCC-CEEEEeCCCchH----HHHHHHHHC---C-CCEEEEeCc-H-HHHHHHHHHHhhcC--CCCcEEEecC
Confidence 45555553233 799999999994 445555553 2 378999987 3 33555555544321 1113555443
Q ss_pred ecCCCCCCccccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEE-eec
Q 048129 228 LVTETKDLNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVII-EVE 283 (412)
Q Consensus 228 ~~~~~e~l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~-E~e 283 (412)
. ..+ + +. ..-+.++.+..++--.+.....+|+.+ +.|+|.-.+++ |.-
T Consensus 225 d---~~~--~--~~-~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 274 (334)
T 2ip2_A 225 D---MLQ--E--VP-SNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERT 274 (334)
T ss_dssp C---TTT--C--CC-SSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred C---CCC--C--CC-CCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 2 222 1 11 123555555544322222334667766 67899765554 543
No 22
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=92.09 E-value=4.1 Score=39.03 Aligned_cols=116 Identities=16% Similarity=0.188 Sum_probs=63.6
Q ss_pred HHHhhhhcCC-eeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc--EEEE
Q 048129 149 AIIERVASAK-RIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP--FSFK 225 (412)
Q Consensus 149 aIleA~~g~~-~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~--Fef~ 225 (412)
.+++.+.-.+ ..+|+|+|.|.|. +...|+.+. | .+++|+++. + ..++.+.+++ +..|+. .+|.
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~--p--~~~~~~~D~-~-~~~~~a~~~~----~~~~~~~~v~~~ 234 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGT----YLAQVLRRH--P--QLTGQIWDL-P-TTRDAARKTI----HAHDLGGRVEFF 234 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCH----HHHHHHHHC--T--TCEEEEEEC-G-GGHHHHHHHH----HHTTCGGGEEEE
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCH----HHHHHHHhC--C--CCeEEEEEC-H-HHHHHHHHHH----HhcCCCCceEEE
Confidence 5666665445 7899999999986 455565552 3 388999987 3 3455454443 344543 5665
Q ss_pred EeecCCCCCCccccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEE-eec
Q 048129 226 IVLVTETKDLNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVII-EVE 283 (412)
Q Consensus 226 ~v~~~~~e~l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~-E~e 283 (412)
.-. ..+... +....-++++.+..++--.+.....+|+.+ +.|+|.-.+++ |.-
T Consensus 235 ~~d---~~~~~~--~~~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 289 (352)
T 3mcz_A 235 EKN---LLDARN--FEGGAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMT 289 (352)
T ss_dssp ECC---TTCGGG--GTTCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred eCC---cccCcc--cCCCCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 542 222210 000112444444433322222345677766 67899765554 543
No 23
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=91.73 E-value=1.7 Score=40.30 Aligned_cols=115 Identities=11% Similarity=0.084 Sum_probs=69.2
Q ss_pred HHHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEe
Q 048129 148 QAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIV 227 (412)
Q Consensus 148 qaIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v 227 (412)
..+++.+...+.-+|+|+|.|.|. +...|+.+ | .++|||+. +...++.+.++ ++..|+..+|..-
T Consensus 110 ~~~~~~~~~~~~~~vLD~GcG~G~----~~~~l~~~--g----~~v~~vD~-s~~~~~~a~~~----~~~~~~~~~~~~~ 174 (286)
T 3m70_A 110 GDVVDAAKIISPCKVLDLGCGQGR----NSLYLSLL--G----YDVTSWDH-NENSIAFLNET----KEKENLNISTALY 174 (286)
T ss_dssp HHHHHHHHHSCSCEEEEESCTTCH----HHHHHHHT--T----CEEEEEES-CHHHHHHHHHH----HHHTTCCEEEEEC
T ss_pred HHHHHHhhccCCCcEEEECCCCCH----HHHHHHHC--C----CeEEEEEC-CHHHHHHHHHH----HHHcCCceEEEEe
Confidence 466666665577789999999985 45556666 2 37999987 54555555444 4455666555543
Q ss_pred ecCCCCCCccccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEEeecC
Q 048129 228 LVTETKDLNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVIIEVEA 284 (412)
Q Consensus 228 ~~~~~e~l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~E~ea 284 (412)
++.++.. -..=+.|+.|..+..-.+..+..+|+.+ +.|+|.-++++....
T Consensus 175 ---d~~~~~~----~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 225 (286)
T 3m70_A 175 ---DINAANI----QENYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAM 225 (286)
T ss_dssp ---CGGGCCC----CSCEEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred ---ccccccc----cCCccEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 2333221 1122456656555443445566777766 678998875554333
No 24
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=91.69 E-value=2.1 Score=41.53 Aligned_cols=113 Identities=19% Similarity=0.187 Sum_probs=62.0
Q ss_pred HHHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc--EEEE
Q 048129 148 QAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP--FSFK 225 (412)
Q Consensus 148 qaIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~--Fef~ 225 (412)
..|++.+.-.+..+|+|+|.|.| .+...|+.+. | .+++|+++. ...++.+.+++. ..|++ .+|.
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G----~~~~~l~~~~--~--~~~~~~~D~--~~~~~~a~~~~~----~~~~~~~v~~~ 237 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNG----GMLAAIALRA--P--HLRGTLVEL--AGPAERARRRFA----DAGLADRVTVA 237 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTS----HHHHHHHHHC--T--TCEEEEEEC--HHHHHHHHHHHH----HTTCTTTEEEE
T ss_pred HHHHHhCCCCCCCEEEEECCCcC----HHHHHHHHHC--C--CCEEEEEeC--HHHHHHHHHHHH----hcCCCCceEEE
Confidence 34566554445679999999999 4555566553 3 489999986 345655555543 34553 6665
Q ss_pred EeecCCCCCCccccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCE-EEEEee
Q 048129 226 IVLVTETKDLNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCV-MVIIEV 282 (412)
Q Consensus 226 ~v~~~~~e~l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~v-vvl~E~ 282 (412)
.-.+ .+.+. . .-+.++.+..+.--.......+|+.+ +.|+|.- ++++|.
T Consensus 238 ~~d~--~~~~~-~-----~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 238 EGDF--FKPLP-V-----TADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp ECCT--TSCCS-C-----CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred eCCC--CCcCC-C-----CCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 4321 11111 1 12344444433221111223566665 6789987 444565
No 25
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=91.42 E-value=2.2 Score=41.34 Aligned_cols=115 Identities=13% Similarity=0.104 Sum_probs=66.2
Q ss_pred HHHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc--EEEE
Q 048129 148 QAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP--FSFK 225 (412)
Q Consensus 148 qaIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~--Fef~ 225 (412)
+.|++.+.-.+.-+|+|+|.|.|. +...|+.+. | .+++|+++. ...++.+.+++. ..|++ .+|.
T Consensus 180 ~~l~~~~~~~~~~~vLDvG~G~G~----~~~~l~~~~--p--~~~~~~~D~--~~~~~~a~~~~~----~~~~~~~v~~~ 245 (359)
T 1x19_A 180 QLLLEEAKLDGVKKMIDVGGGIGD----ISAAMLKHF--P--ELDSTILNL--PGAIDLVNENAA----EKGVADRMRGI 245 (359)
T ss_dssp HHHHHHCCCTTCCEEEEESCTTCH----HHHHHHHHC--T--TCEEEEEEC--GGGHHHHHHHHH----HTTCTTTEEEE
T ss_pred HHHHHhcCCCCCCEEEEECCcccH----HHHHHHHHC--C--CCeEEEEec--HHHHHHHHHHHH----hcCCCCCEEEE
Confidence 456666654556799999999986 344555542 3 389999986 344665555543 33443 5665
Q ss_pred EeecCCCCCCccccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEE-EEeecC
Q 048129 226 IVLVTETKDLNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMV-IIEVEA 284 (412)
Q Consensus 226 ~v~~~~~e~l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvv-l~E~ea 284 (412)
.-. ..+.. ...++.++.+..+.--.......+|+.+ +.|+|.-.+ ++|...
T Consensus 246 ~~d---~~~~~-----~~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~ 298 (359)
T 1x19_A 246 AVD---IYKES-----YPEADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVI 298 (359)
T ss_dssp ECC---TTTSC-----CCCCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECC
T ss_pred eCc---cccCC-----CCCCCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 432 32221 2233666665555432222355677766 567997655 556443
No 26
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=91.17 E-value=6.9 Score=35.21 Aligned_cols=112 Identities=10% Similarity=0.046 Sum_probs=62.3
Q ss_pred HhhHHHHhhhhc-CCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc--
Q 048129 145 AGTQAIIERVAS-AKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP-- 221 (412)
Q Consensus 145 taNqaIleA~~g-~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~-- 221 (412)
.....+++.+.+ ...-+|+|+|.|.|.. ...|+.+. | . ++|||+. +...++.+.++ ++..|++
T Consensus 32 ~~~~~~l~~l~~~~~~~~vLDiG~G~G~~----~~~l~~~~--~--~-~v~~vD~-s~~~~~~a~~~----~~~~~~~~~ 97 (257)
T 3f4k_A 32 EATRKAVSFINELTDDAKIADIGCGTGGQ----TLFLADYV--K--G-QITGIDL-FPDFIEIFNEN----AVKANCADR 97 (257)
T ss_dssp HHHHHHHTTSCCCCTTCEEEEETCTTSHH----HHHHHHHC--C--S-EEEEEES-CHHHHHHHHHH----HHHTTCTTT
T ss_pred HHHHHHHHHHhcCCCCCeEEEeCCCCCHH----HHHHHHhC--C--C-eEEEEEC-CHHHHHHHHHH----HHHcCCCCc
Confidence 334445565543 3345899999998853 44455543 2 2 7999987 54555544443 4556766
Q ss_pred EEEEEeecCCCCCCccccccCCCC--ceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEEe
Q 048129 222 FSFKIVLVTETKDLNEDKFDLNAG--EAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVIIE 281 (412)
Q Consensus 222 Fef~~v~~~~~e~l~~~~l~~~~~--E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~E 281 (412)
.+|..- +.+++. ..++ +.|+.+.. +... ..+.+|+.+ +.|+|.-.+++.
T Consensus 98 ~~~~~~---d~~~~~-----~~~~~fD~v~~~~~--l~~~-~~~~~l~~~~~~L~pgG~l~~~ 149 (257)
T 3f4k_A 98 VKGITG---SMDNLP-----FQNEELDLIWSEGA--IYNI-GFERGMNEWSKYLKKGGFIAVS 149 (257)
T ss_dssp EEEEEC---CTTSCS-----SCTTCEEEEEEESC--SCCC-CHHHHHHHHHTTEEEEEEEEEE
T ss_pred eEEEEC---ChhhCC-----CCCCCEEEEEecCh--Hhhc-CHHHHHHHHHHHcCCCcEEEEE
Confidence 555543 333332 1222 34444433 3222 355666666 568998766654
No 27
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=90.85 E-value=8.8 Score=34.47 Aligned_cols=106 Identities=9% Similarity=0.123 Sum_probs=58.0
Q ss_pred HHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc-EEEEEee
Q 048129 150 IIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP-FSFKIVL 228 (412)
Q Consensus 150 IleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~-Fef~~v~ 228 (412)
+++.+.-.+.-+|+|+|.|.|. +...|+.+. + ++|||+. +...++.+.+++. ..|++ ++|...
T Consensus 13 ~~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~--~----~v~~vD~-s~~~~~~a~~~~~----~~~~~~v~~~~~- 76 (239)
T 1xxl_A 13 MIKTAECRAEHRVLDIGAGAGH----TALAFSPYV--Q----ECIGVDA-TKEMVEVASSFAQ----EKGVENVRFQQG- 76 (239)
T ss_dssp HHHHHTCCTTCEEEEESCTTSH----HHHHHGGGS--S----EEEEEES-CHHHHHHHHHHHH----HHTCCSEEEEEC-
T ss_pred HHHHhCcCCCCEEEEEccCcCH----HHHHHHHhC--C----EEEEEEC-CHHHHHHHHHHHH----HcCCCCeEEEec-
Confidence 3444555566789999999886 445566552 2 6999987 5555555554443 33544 455433
Q ss_pred cCCCCCCccccccCCCC--ceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEE
Q 048129 229 VTETKDLNEDKFDLNAG--EAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVII 280 (412)
Q Consensus 229 ~~~~e~l~~~~l~~~~~--E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~ 280 (412)
+.+++. ..++ +.|+.+..+. ..++ ...+|+.+ +.|+|.-.+++
T Consensus 77 --d~~~~~-----~~~~~fD~v~~~~~l~-~~~~-~~~~l~~~~~~LkpgG~l~~ 122 (239)
T 1xxl_A 77 --TAESLP-----FPDDSFDIITCRYAAH-HFSD-VRKAVREVARVLKQDGRFLL 122 (239)
T ss_dssp --BTTBCC-----SCTTCEEEEEEESCGG-GCSC-HHHHHHHHHHHEEEEEEEEE
T ss_pred --ccccCC-----CCCCcEEEEEECCchh-hccC-HHHHHHHHHHHcCCCcEEEE
Confidence 233332 2222 3333332222 2233 34555554 77899876665
No 28
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=90.41 E-value=5.4 Score=37.97 Aligned_cols=102 Identities=15% Similarity=0.070 Sum_probs=57.4
Q ss_pred CCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCC--cEEEEEeecCCCCC
Q 048129 157 AKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNL--PFSFKIVLVTETKD 234 (412)
Q Consensus 157 ~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv--~Fef~~v~~~~~e~ 234 (412)
.+..+|+|+|.|.| .+...|+.+. | .+++|+++. ...++.+.+++. ..|+ ..+|..-.+ .+.
T Consensus 168 ~~~~~vlDvG~G~G----~~~~~l~~~~---p-~~~~~~~D~--~~~~~~a~~~~~----~~~~~~~v~~~~~d~--~~~ 231 (332)
T 3i53_A 168 AALGHVVDVGGGSG----GLLSALLTAH---E-DLSGTVLDL--QGPASAAHRRFL----DTGLSGRAQVVVGSF--FDP 231 (332)
T ss_dssp GGGSEEEEETCTTS----HHHHHHHHHC---T-TCEEEEEEC--HHHHHHHHHHHH----HTTCTTTEEEEECCT--TSC
T ss_pred CCCCEEEEeCCChh----HHHHHHHHHC---C-CCeEEEecC--HHHHHHHHHhhh----hcCcCcCeEEecCCC--CCC
Confidence 34579999999999 4555666553 3 378999976 345555555543 3444 366665432 111
Q ss_pred CccccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEE
Q 048129 235 LNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVII 280 (412)
Q Consensus 235 l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~ 280 (412)
+ + . .-++++.+..++--.......+|+.+ +.|+|.-.+++
T Consensus 232 ~-p----~-~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i 272 (332)
T 3i53_A 232 L-P----A-GAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLV 272 (332)
T ss_dssp C-C----C-SCSEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred C-C----C-CCcEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 1 1 1 22455444443322222245677766 67899865554
No 29
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=90.38 E-value=3.2 Score=39.99 Aligned_cols=114 Identities=15% Similarity=0.128 Sum_probs=61.0
Q ss_pred HHHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCC--cEEEE
Q 048129 148 QAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNL--PFSFK 225 (412)
Q Consensus 148 qaIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv--~Fef~ 225 (412)
+.|++.+.-.+.-+|+|+|.|.|. +...|+.+ +| .+++|+++. + ..++.+.+++ +..|+ .++|.
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~----~~~~l~~~--~~--~~~~~~~D~-~-~~~~~a~~~~----~~~~~~~~v~~~ 238 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGG----FAAAIARR--AP--HVSATVLEM-A-GTVDTARSYL----KDEGLSDRVDVV 238 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSH----HHHHHHHH--CT--TCEEEEEEC-T-THHHHHHHHH----HHTTCTTTEEEE
T ss_pred HHHHHhCCCccCcEEEEeCCcCcH----HHHHHHHh--CC--CCEEEEecC-H-HHHHHHHHHH----HhcCCCCceEEE
Confidence 445666554456799999999995 34455544 23 488999985 2 4455555554 33455 36665
Q ss_pred EeecCCCCCCccccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEE-EEeec
Q 048129 226 IVLVTETKDLNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMV-IIEVE 283 (412)
Q Consensus 226 ~v~~~~~e~l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvv-l~E~e 283 (412)
.-.+ .+.+. . .-+.++.+..+.--.......+|+.+ +.|+|.-.+ ++|..
T Consensus 239 ~~d~--~~~~~-~-----~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 239 EGDF--FEPLP-R-----KADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp ECCT--TSCCS-S-----CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred eCCC--CCCCC-C-----CccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 5321 11111 0 12344444433221111223566666 668998744 45654
No 30
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=90.30 E-value=9.7 Score=35.75 Aligned_cols=110 Identities=9% Similarity=0.080 Sum_probs=60.9
Q ss_pred HHHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc--EEEE
Q 048129 148 QAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP--FSFK 225 (412)
Q Consensus 148 qaIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~--Fef~ 225 (412)
+.|++.+.-.+.-+|+|+|.|.|. +...|+.+. | .++|||+. +...++.+.++ ++..|++ .+|.
T Consensus 80 ~~~~~~~~~~~~~~vLDiGcG~G~----~~~~la~~~-~----~~v~gvD~-s~~~~~~a~~~----~~~~~~~~~v~~~ 145 (318)
T 2fk8_A 80 DLNLDKLDLKPGMTLLDIGCGWGT----TMRRAVERF-D----VNVIGLTL-SKNQHARCEQV----LASIDTNRSRQVL 145 (318)
T ss_dssp HHHHTTSCCCTTCEEEEESCTTSH----HHHHHHHHH-C----CEEEEEES-CHHHHHHHHHH----HHTSCCSSCEEEE
T ss_pred HHHHHhcCCCCcCEEEEEcccchH----HHHHHHHHC-C----CEEEEEEC-CHHHHHHHHHH----HHhcCCCCceEEE
Confidence 345555554456689999998874 344555443 2 37999987 54555555444 3445654 4444
Q ss_pred EeecCCCCCCccccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEE
Q 048129 226 IVLVTETKDLNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVII 280 (412)
Q Consensus 226 ~v~~~~~e~l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~ 280 (412)
. .+..++. ..=+.|+.+.++.--.......+|+.+ +.|+|.-.+++
T Consensus 146 ~---~d~~~~~------~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 192 (318)
T 2fk8_A 146 L---QGWEDFA------EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTV 192 (318)
T ss_dssp E---SCGGGCC------CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEE
T ss_pred E---CChHHCC------CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 3 2333332 122455555444322223445666655 67899866655
No 31
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=90.27 E-value=1.3 Score=38.95 Aligned_cols=96 Identities=18% Similarity=0.256 Sum_probs=53.1
Q ss_pred eeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCCCCccc
Q 048129 159 RIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVLVTETKDLNED 238 (412)
Q Consensus 159 ~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~~~~~e~l~~~ 238 (412)
.-.|+|+|.|.|. +...|+.+ | .++|||+. +...++.+.+++ ++.+. . .+..++..
T Consensus 44 ~~~vLDiGcG~G~----~~~~l~~~--~----~~v~~vD~-s~~~~~~a~~~~-------~~~~~--~---~d~~~~~~- 99 (211)
T 3e23_A 44 GAKILELGCGAGY----QAEAMLAA--G----FDVDATDG-SPELAAEASRRL-------GRPVR--T---MLFHQLDA- 99 (211)
T ss_dssp TCEEEESSCTTSH----HHHHHHHT--T----CEEEEEES-CHHHHHHHHHHH-------TSCCE--E---CCGGGCCC-
T ss_pred CCcEEEECCCCCH----HHHHHHHc--C----CeEEEECC-CHHHHHHHHHhc-------CCceE--E---eeeccCCC-
Confidence 4579999999886 45666665 2 47999987 555565555554 44432 2 22333221
Q ss_pred cccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEEe
Q 048129 239 KFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVIIE 281 (412)
Q Consensus 239 ~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~E 281 (412)
-..=+.|+.+..+.--.......+|+.+ +.|+|.-++++.
T Consensus 100 ---~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 140 (211)
T 3e23_A 100 ---IDAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYAS 140 (211)
T ss_dssp ---CSCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---CCcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 0111344433322222222445666666 678998777765
No 32
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=89.74 E-value=5.3 Score=34.23 Aligned_cols=111 Identities=17% Similarity=0.181 Sum_probs=62.2
Q ss_pred HHHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCC-cEEEEE
Q 048129 148 QAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNL-PFSFKI 226 (412)
Q Consensus 148 qaIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv-~Fef~~ 226 (412)
+.+++.+...+.-+|+|+|.|.|. +...|+.+ | .++|||+. +...++.+.+++. ..++ ..+|..
T Consensus 22 ~~l~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~--~----~~v~~vD~-s~~~~~~a~~~~~----~~~~~~~~~~~ 86 (199)
T 2xvm_A 22 SEVLEAVKVVKPGKTLDLGCGNGR----NSLYLAAN--G----YDVDAWDK-NAMSIANVERIKS----IENLDNLHTRV 86 (199)
T ss_dssp HHHHHHTTTSCSCEEEEETCTTSH----HHHHHHHT--T----CEEEEEES-CHHHHHHHHHHHH----HHTCTTEEEEE
T ss_pred HHHHHHhhccCCCeEEEEcCCCCH----HHHHHHHC--C----CeEEEEEC-CHHHHHHHHHHHH----hCCCCCcEEEE
Confidence 456666654445599999999886 34456655 2 37999987 5455555554443 3344 345543
Q ss_pred eecCCCCCCccccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEE
Q 048129 227 VLVTETKDLNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVII 280 (412)
Q Consensus 227 v~~~~~e~l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~ 280 (412)
. +..++. + -..=+.|+.+..+.--.+.....+|+.+ +.|+|.-.+++
T Consensus 87 ~---d~~~~~---~-~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~ 134 (199)
T 2xvm_A 87 V---DLNNLT---F-DRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLI 134 (199)
T ss_dssp C---CGGGCC---C-CCCEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEE
T ss_pred c---chhhCC---C-CCCceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 3 232222 1 1111455555444333334556677766 67899876544
No 33
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=89.25 E-value=13 Score=33.85 Aligned_cols=109 Identities=19% Similarity=0.290 Sum_probs=58.9
Q ss_pred HHHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc--EEEE
Q 048129 148 QAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP--FSFK 225 (412)
Q Consensus 148 qaIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~--Fef~ 225 (412)
..|++.+.-.+.-+|+|+|.|.|. +...|+.+.+ .++|||+. +...++.+.++ ++..|++ .+|.
T Consensus 51 ~~l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~~-----~~v~gvD~-s~~~~~~a~~~----~~~~~~~~~~~~~ 116 (273)
T 3bus_A 51 DEMIALLDVRSGDRVLDVGCGIGK----PAVRLATARD-----VRVTGISI-SRPQVNQANAR----ATAAGLANRVTFS 116 (273)
T ss_dssp HHHHHHSCCCTTCEEEEESCTTSH----HHHHHHHHSC-----CEEEEEES-CHHHHHHHHHH----HHHTTCTTTEEEE
T ss_pred HHHHHhcCCCCCCEEEEeCCCCCH----HHHHHHHhcC-----CEEEEEeC-CHHHHHHHHHH----HHhcCCCcceEEE
Confidence 344555544455699999998875 3445555431 57999987 54555544444 3445654 5554
Q ss_pred EeecCCCCCCccccccCCCC--ceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEE
Q 048129 226 IVLVTETKDLNEDKFDLNAG--EAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVII 280 (412)
Q Consensus 226 ~v~~~~~e~l~~~~l~~~~~--E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~ 280 (412)
.. +..++. ..++ +.|+.+ ..+..-.....+|+.+ +.|+|.-.+++
T Consensus 117 ~~---d~~~~~-----~~~~~fD~v~~~--~~l~~~~~~~~~l~~~~~~L~pgG~l~i 164 (273)
T 3bus_A 117 YA---DAMDLP-----FEDASFDAVWAL--ESLHHMPDRGRALREMARVLRPGGTVAI 164 (273)
T ss_dssp EC---CTTSCC-----SCTTCEEEEEEE--SCTTTSSCHHHHHHHHHTTEEEEEEEEE
T ss_pred EC---ccccCC-----CCCCCccEEEEe--chhhhCCCHHHHHHHHHHHcCCCeEEEE
Confidence 43 233332 1222 333333 3332222335667666 66899865554
No 34
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=88.79 E-value=3.2 Score=41.01 Aligned_cols=117 Identities=14% Similarity=0.085 Sum_probs=68.8
Q ss_pred hhHHHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCC----c
Q 048129 146 GTQAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNL----P 221 (412)
Q Consensus 146 aNqaIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv----~ 221 (412)
..+.+++.+.....-+|+|+|.|.|. +...++.+. | ..++|+|+. +...++.+.+++.. .|+ .
T Consensus 210 ~~~~ll~~l~~~~~~~VLDlGcG~G~----~s~~la~~~--p--~~~V~gvD~-s~~al~~Ar~n~~~----ngl~~~~~ 276 (375)
T 4dcm_A 210 GARFFMQHLPENLEGEIVDLGCGNGV----IGLTLLDKN--P--QAKVVFVDE-SPMAVASSRLNVET----NMPEALDR 276 (375)
T ss_dssp HHHHHHHTCCCSCCSEEEEETCTTCH----HHHHHHHHC--T--TCEEEEEES-CHHHHHHHHHHHHH----HCGGGGGG
T ss_pred HHHHHHHhCcccCCCeEEEEeCcchH----HHHHHHHHC--C--CCEEEEEEC-cHHHHHHHHHHHHH----cCCCcCce
Confidence 34567888876666789999999984 444555552 3 378999987 55556655555443 343 3
Q ss_pred EEEEEeecCCCCCCccccccCCCCceEEEeecccc--CC-CCchHHHHHHH-HhcCCCEEEEEee
Q 048129 222 FSFKIVLVTETKDLNEDKFDLNAGEAVAVYSPILL--SR-TRHPDFLIKML-RKISPCVMVIIEV 282 (412)
Q Consensus 222 Fef~~v~~~~~e~l~~~~l~~~~~E~laVn~~~~L--~~-~~~~~~~L~~v-r~L~P~vvvl~E~ 282 (412)
++|..-.+ .+.+. -..=+.|+.|-+|.- .. ......+++.+ +.|+|.-.+++..
T Consensus 277 v~~~~~D~--~~~~~-----~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~ 334 (375)
T 4dcm_A 277 CEFMINNA--LSGVE-----PFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVA 334 (375)
T ss_dssp EEEEECST--TTTCC-----TTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEechh--hccCC-----CCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 55554321 22111 112267888877764 11 22233566666 5589998887754
No 35
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=88.68 E-value=2.5 Score=37.38 Aligned_cols=101 Identities=15% Similarity=0.204 Sum_probs=53.4
Q ss_pred eeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCC------cEEEEEeecCCC
Q 048129 159 RIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNL------PFSFKIVLVTET 232 (412)
Q Consensus 159 ~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv------~Fef~~v~~~~~ 232 (412)
.-+|+|+|.|.|. +...|+.+ | .++|||+. +...++.+. +.++..++ ..+|... +.
T Consensus 31 ~~~vLdiG~G~G~----~~~~l~~~--~----~~v~~vD~-s~~~~~~a~----~~~~~~~~~~~~~~~~~~~~~---d~ 92 (235)
T 3sm3_A 31 DDEILDIGCGSGK----ISLELASK--G----YSVTGIDI-NSEAIRLAE----TAARSPGLNQKTGGKAEFKVE---NA 92 (235)
T ss_dssp TCEEEEETCTTSH----HHHHHHHT--T----CEEEEEES-CHHHHHHHH----HHTTCCSCCSSSSCEEEEEEC---CT
T ss_pred CCeEEEECCCCCH----HHHHHHhC--C----CeEEEEEC-CHHHHHHHH----HHHHhcCCccccCcceEEEEe---cc
Confidence 4479999999885 44555655 2 47999987 444444333 33444555 3444433 23
Q ss_pred CCCccccccCCCCceEEEeecccc-CCCCchHHHHHHH-HhcCCCEEEEE
Q 048129 233 KDLNEDKFDLNAGEAVAVYSPILL-SRTRHPDFLIKML-RKISPCVMVII 280 (412)
Q Consensus 233 e~l~~~~l~~~~~E~laVn~~~~L-~~~~~~~~~L~~v-r~L~P~vvvl~ 280 (412)
.++.. .-..=+.|+.+..+.- ..+..+..+|+.+ +.|+|.-.+++
T Consensus 93 ~~~~~---~~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~ 139 (235)
T 3sm3_A 93 SSLSF---HDSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYL 139 (235)
T ss_dssp TSCCS---CTTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred cccCC---CCCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 33321 1111134444433322 2333344677766 67899866655
No 36
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=88.56 E-value=2.3 Score=36.25 Aligned_cols=115 Identities=13% Similarity=0.111 Sum_probs=64.3
Q ss_pred HHHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc---EEE
Q 048129 148 QAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP---FSF 224 (412)
Q Consensus 148 qaIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~---Fef 224 (412)
+.+++.+.-.+.-+|+|+|.|.|. +...++.+ + .++|+++. +...++.+.+++ +..|++ .+|
T Consensus 42 ~~l~~~~~~~~~~~vLdiG~G~G~----~~~~~~~~--~----~~v~~~D~-~~~~~~~a~~~~----~~~~~~~~~~~~ 106 (194)
T 1dus_A 42 KILVENVVVDKDDDILDLGCGYGV----IGIALADE--V----KSTTMADI-NRRAIKLAKENI----KLNNLDNYDIRV 106 (194)
T ss_dssp HHHHHHCCCCTTCEEEEETCTTSH----HHHHHGGG--S----SEEEEEES-CHHHHHHHHHHH----HHTTCTTSCEEE
T ss_pred HHHHHHcccCCCCeEEEeCCCCCH----HHHHHHHc--C----CeEEEEEC-CHHHHHHHHHHH----HHcCCCccceEE
Confidence 455666654456689999999884 44455655 1 47999987 445555554443 345665 555
Q ss_pred EEeecCCCCCCccccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEEeecCc
Q 048129 225 KIVLVTETKDLNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVIIEVEAN 285 (412)
Q Consensus 225 ~~v~~~~~e~l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~E~ea~ 285 (412)
... ++.+..+ -..=+.|+.|.++.. .......+|+.+ +.|+|.-.+++.....
T Consensus 107 ~~~---d~~~~~~----~~~~D~v~~~~~~~~-~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 107 VHS---DLYENVK----DRKYNKIITNPPIRA-GKEVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp EEC---STTTTCT----TSCEEEEEECCCSTT-CHHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred EEC---chhcccc----cCCceEEEECCCccc-chhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 443 2222111 112256666655432 122344566655 6789987777655443
No 37
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=88.55 E-value=16 Score=34.05 Aligned_cols=111 Identities=9% Similarity=0.187 Sum_probs=63.9
Q ss_pred HHHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc--EEEE
Q 048129 148 QAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP--FSFK 225 (412)
Q Consensus 148 qaIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~--Fef~ 225 (412)
..|++.+.-...-+|+|+|.|.|. +...|+.+.+ .++|||+. +...++.+.+++ +..|++ .+|.
T Consensus 62 ~~~~~~~~~~~~~~vLDiGcG~G~----~~~~la~~~~-----~~v~gvD~-s~~~~~~a~~~~----~~~~~~~~v~~~ 127 (302)
T 3hem_A 62 KLALDKLNLEPGMTLLDIGCGWGS----TMRHAVAEYD-----VNVIGLTL-SENQYAHDKAMF----DEVDSPRRKEVR 127 (302)
T ss_dssp HHHHHTTCCCTTCEEEEETCTTSH----HHHHHHHHHC-----CEEEEEEC-CHHHHHHHHHHH----HHSCCSSCEEEE
T ss_pred HHHHHHcCCCCcCEEEEeeccCcH----HHHHHHHhCC-----CEEEEEEC-CHHHHHHHHHHH----HhcCCCCceEEE
Confidence 345565554556789999998774 4455555431 46999987 555565555543 446665 4443
Q ss_pred EeecCCCCCCccccccCCCCceEEEeeccc-cCCC------CchHHHHHHH-HhcCCCEEEEEe
Q 048129 226 IVLVTETKDLNEDKFDLNAGEAVAVYSPIL-LSRT------RHPDFLIKML-RKISPCVMVIIE 281 (412)
Q Consensus 226 ~v~~~~~e~l~~~~l~~~~~E~laVn~~~~-L~~~------~~~~~~L~~v-r~L~P~vvvl~E 281 (412)
. .+..++ . ..=+.|+.+.++. +..+ .....+|+.+ +.|+|.-.+++.
T Consensus 128 ~---~d~~~~-~-----~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 182 (302)
T 3hem_A 128 I---QGWEEF-D-----EPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLH 182 (302)
T ss_dssp E---CCGGGC-C-----CCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEE
T ss_pred E---CCHHHc-C-----CCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 3 234333 1 1224555554443 3332 3446777766 678998766653
No 38
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=88.44 E-value=5.1 Score=39.12 Aligned_cols=107 Identities=12% Similarity=0.038 Sum_probs=58.5
Q ss_pred HHHhhhh-cCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEe
Q 048129 149 AIIERVA-SAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIV 227 (412)
Q Consensus 149 aIleA~~-g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v 227 (412)
.|++.+. -...-+|+|+|.|.|. +...|+.+. | .+++|+++. + ..++ .|+.. -..+|..-
T Consensus 193 ~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p-~~~~~~~D~-~-~~~~--------~a~~~-~~v~~~~~ 253 (368)
T 3reo_A 193 KILEMYNGFEGLTTIVDVGGGTGA----VASMIVAKY---P-SINAINFDL-P-HVIQ--------DAPAF-SGVEHLGG 253 (368)
T ss_dssp HHHTTCCTTTTCSEEEEETCTTSH----HHHHHHHHC---T-TCEEEEEEC-H-HHHT--------TCCCC-TTEEEEEC
T ss_pred HHHHhcccccCCCEEEEeCCCcCH----HHHHHHHhC---C-CCEEEEEeh-H-HHHH--------hhhhc-CCCEEEec
Confidence 4555554 2445799999999885 445555553 3 488999986 2 2222 22222 13455442
Q ss_pred ecCCCCCCccccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEE-EEeec
Q 048129 228 LVTETKDLNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMV-IIEVE 283 (412)
Q Consensus 228 ~~~~~e~l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvv-l~E~e 283 (412)
+..+ + + ..+++++.+..++--.......+|+.+ +.|+|.-.+ ++|.-
T Consensus 254 ---d~~~--~--~--p~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 302 (368)
T 3reo_A 254 ---DMFD--G--V--PKGDAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYI 302 (368)
T ss_dssp ---CTTT--C--C--CCCSEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred ---CCCC--C--C--CCCCEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 2222 1 1 123666666655432333344677766 678998644 44543
No 39
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=88.18 E-value=2.2 Score=41.82 Aligned_cols=108 Identities=13% Similarity=0.069 Sum_probs=58.7
Q ss_pred HHHHhhhh-cCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEE
Q 048129 148 QAIIERVA-SAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKI 226 (412)
Q Consensus 148 qaIleA~~-g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~ 226 (412)
..|++.+. -...-+|+|+|.|.|. +...|+.+. | .+++|+++. + ..++ .|+.. -..+|..
T Consensus 190 ~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p-~~~~~~~D~-~-~~~~--------~a~~~-~~v~~~~ 250 (364)
T 3p9c_A 190 KKLLELYHGFEGLGTLVDVGGGVGA----TVAAIAAHY---P-TIKGVNFDL-P-HVIS--------EAPQF-PGVTHVG 250 (364)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSH----HHHHHHHHC---T-TCEEEEEEC-H-HHHT--------TCCCC-TTEEEEE
T ss_pred HHHHHhcccccCCCEEEEeCCCCCH----HHHHHHHHC---C-CCeEEEecC-H-HHHH--------hhhhc-CCeEEEe
Confidence 34666655 3456799999999995 445555543 3 478999986 2 2222 22222 1345544
Q ss_pred eecCCCCCCccccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEE-Eeec
Q 048129 227 VLVTETKDLNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVI-IEVE 283 (412)
Q Consensus 227 v~~~~~e~l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl-~E~e 283 (412)
- +..+ + + ..+++++....++--.......+|+.+ +.|+|.-.++ +|.-
T Consensus 251 ~---D~~~--~--~--p~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~ 300 (364)
T 3p9c_A 251 G---DMFK--E--V--PSGDTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCI 300 (364)
T ss_dssp C---CTTT--C--C--CCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECC
T ss_pred C---CcCC--C--C--CCCCEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence 3 2222 1 1 123666655555432333445677777 6689976554 4543
No 40
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=88.12 E-value=3.8 Score=34.81 Aligned_cols=108 Identities=6% Similarity=0.066 Sum_probs=56.2
Q ss_pred HHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEee
Q 048129 149 AIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVL 228 (412)
Q Consensus 149 aIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~ 228 (412)
.+++.+-. +.-+|+|+|.|.|. +...|+.+ + .++|+|+. +...++.+.+++. + .+|...
T Consensus 38 ~~l~~~~~-~~~~vLdiG~G~G~----~~~~l~~~--~----~~v~~~D~-~~~~~~~a~~~~~------~--~~~~~~- 96 (195)
T 3cgg_A 38 RLIDAMAP-RGAKILDAGCGQGR----IGGYLSKQ--G----HDVLGTDL-DPILIDYAKQDFP------E--ARWVVG- 96 (195)
T ss_dssp HHHHHHSC-TTCEEEEETCTTTH----HHHHHHHT--T----CEEEEEES-CHHHHHHHHHHCT------T--SEEEEC-
T ss_pred HHHHHhcc-CCCeEEEECCCCCH----HHHHHHHC--C----CcEEEEcC-CHHHHHHHHHhCC------C--CcEEEc-
Confidence 34444432 44589999999886 34455555 2 37999987 4455555544431 2 333332
Q ss_pred cCCCCCCccccccCCCCceEEEe-eccccCCCCchHHHHHHH-HhcCCCEEEEEee
Q 048129 229 VTETKDLNEDKFDLNAGEAVAVY-SPILLSRTRHPDFLIKML-RKISPCVMVIIEV 282 (412)
Q Consensus 229 ~~~~e~l~~~~l~~~~~E~laVn-~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~E~ 282 (412)
+..++. +.-..=+.|+.+ ..+....+.....+|+.+ +.|+|.-.+++..
T Consensus 97 --d~~~~~---~~~~~~D~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~ 147 (195)
T 3cgg_A 97 --DLSVDQ---ISETDFDLIVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGF 147 (195)
T ss_dssp --CTTTSC---CCCCCEEEEEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --ccccCC---CCCCceeEEEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 233322 111112445544 333332223345566655 6789987777653
No 41
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=87.79 E-value=1 Score=40.80 Aligned_cols=98 Identities=9% Similarity=0.100 Sum_probs=49.7
Q ss_pred CeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCCCCcc
Q 048129 158 KRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVLVTETKDLNE 237 (412)
Q Consensus 158 ~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~~~~~e~l~~ 237 (412)
+.-+|+|+|.|.|. +...|+.+ | .++|||+. +...++.+.++ ++|... +..++..
T Consensus 41 ~~~~vLDiGcG~G~----~~~~l~~~--~----~~v~gvD~-s~~~~~~a~~~-----------~~~~~~---d~~~~~~ 95 (240)
T 3dli_A 41 GCRRVLDIGCGRGE----FLELCKEE--G----IESIGVDI-NEDMIKFCEGK-----------FNVVKS---DAIEYLK 95 (240)
T ss_dssp TCSCEEEETCTTTH----HHHHHHHH--T----CCEEEECS-CHHHHHHHHTT-----------SEEECS---CHHHHHH
T ss_pred CCCeEEEEeCCCCH----HHHHHHhC--C----CcEEEEEC-CHHHHHHHHhh-----------cceeec---cHHHHhh
Confidence 34689999998775 34566655 2 24799987 44444433332 233222 2222110
Q ss_pred ccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEEe
Q 048129 238 DKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVIIE 281 (412)
Q Consensus 238 ~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~E 281 (412)
.+.-..=+.|+.+.++.--.......+|+.+ +.|+|.-.+++.
T Consensus 96 -~~~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 139 (240)
T 3dli_A 96 -SLPDKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIE 139 (240)
T ss_dssp -TSCTTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEE
T ss_pred -hcCCCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEE
Confidence 1111111455544444332233445667665 778997655553
No 42
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=87.09 E-value=4.9 Score=36.12 Aligned_cols=112 Identities=13% Similarity=0.138 Sum_probs=59.9
Q ss_pred HHHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEe
Q 048129 148 QAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIV 227 (412)
Q Consensus 148 qaIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v 227 (412)
..+++.+...+.-+|+|+|.|.|.- ...|+.+. ..++|+|+. +...++.+.+++.+. -..+|..
T Consensus 83 ~~~l~~l~~~~~~~vLDiG~G~G~~----~~~l~~~~-----~~~v~~vD~-s~~~~~~a~~~~~~~-----~~~~~~~- 146 (254)
T 1xtp_A 83 RNFIASLPGHGTSRALDCGAGIGRI----TKNLLTKL-----YATTDLLEP-VKHMLEEAKRELAGM-----PVGKFIL- 146 (254)
T ss_dssp HHHHHTSTTCCCSEEEEETCTTTHH----HHHTHHHH-----CSEEEEEES-CHHHHHHHHHHTTTS-----SEEEEEE-
T ss_pred HHHHHhhcccCCCEEEEECCCcCHH----HHHHHHhh-----cCEEEEEeC-CHHHHHHHHHHhccC-----CceEEEE-
Confidence 5566666555677999999998863 33444332 147999987 545555555443221 2344433
Q ss_pred ecCCCCCCccccccCCCC--ceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEEee
Q 048129 228 LVTETKDLNEDKFDLNAG--EAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVIIEV 282 (412)
Q Consensus 228 ~~~~~e~l~~~~l~~~~~--E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~E~ 282 (412)
.++.++. ..++ +.|+.+..+.--.......+|+.+ +.|+|.-.+++..
T Consensus 147 --~d~~~~~-----~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 197 (254)
T 1xtp_A 147 --ASMETAT-----LPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKE 197 (254)
T ss_dssp --SCGGGCC-----CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --ccHHHCC-----CCCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 2333332 1222 344443333221112345566655 7789987766644
No 43
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=86.97 E-value=17 Score=34.03 Aligned_cols=110 Identities=15% Similarity=0.119 Sum_probs=61.2
Q ss_pred HHHHhhhh-cCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc--EEE
Q 048129 148 QAIIERVA-SAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP--FSF 224 (412)
Q Consensus 148 qaIleA~~-g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~--Fef 224 (412)
+.|++.+. -...-+|+|+|.|.|. +...|+.+.+ .++|||+. +...++.+.++ ++..|++ .+|
T Consensus 106 ~~l~~~l~~~~~~~~vLDiGcG~G~----~~~~la~~~~-----~~v~gvD~-s~~~~~~a~~~----~~~~~~~~~v~~ 171 (312)
T 3vc1_A 106 EFLMDHLGQAGPDDTLVDAGCGRGG----SMVMAHRRFG-----SRVEGVTL-SAAQADFGNRR----ARELRIDDHVRS 171 (312)
T ss_dssp HHHHTTSCCCCTTCEEEEESCTTSH----HHHHHHHHHC-----CEEEEEES-CHHHHHHHHHH----HHHTTCTTTEEE
T ss_pred HHHHHHhccCCCCCEEEEecCCCCH----HHHHHHHHcC-----CEEEEEeC-CHHHHHHHHHH----HHHcCCCCceEE
Confidence 34666665 3445689999999884 3444555531 47999987 54555554444 4456665 566
Q ss_pred EEeecCCCCCCccccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEE
Q 048129 225 KIVLVTETKDLNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVII 280 (412)
Q Consensus 225 ~~v~~~~~e~l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~ 280 (412)
..- +.+++. +.-..=+.|+.+..+.-- + ...+|+.+ +.|+|.-.+++
T Consensus 172 ~~~---d~~~~~---~~~~~fD~V~~~~~l~~~--~-~~~~l~~~~~~LkpgG~l~~ 219 (312)
T 3vc1_A 172 RVC---NMLDTP---FDKGAVTASWNNESTMYV--D-LHDLFSEHSRFLKVGGRYVT 219 (312)
T ss_dssp EEC---CTTSCC---CCTTCEEEEEEESCGGGS--C-HHHHHHHHHHHEEEEEEEEE
T ss_pred EEC---ChhcCC---CCCCCEeEEEECCchhhC--C-HHHHHHHHHHHcCCCcEEEE
Confidence 543 333332 111111344444333322 2 55666655 77899876665
No 44
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=86.43 E-value=3.4 Score=36.31 Aligned_cols=111 Identities=11% Similarity=0.231 Sum_probs=62.4
Q ss_pred HHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEee
Q 048129 149 AIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVL 228 (412)
Q Consensus 149 aIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~ 228 (412)
.+.+.+...+.-+|+|+|.|.|. +...|+.+ + -++|||+. +...++.+.+++.+ .+ ..+|...
T Consensus 42 ~l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~--~----~~v~~vD~-s~~~~~~a~~~~~~----~~-~~~~~~~- 104 (216)
T 3ofk_A 42 LLRLSLSSGAVSNGLEIGCAAGA----FTEKLAPH--C----KRLTVIDV-MPRAIGRACQRTKR----WS-HISWAAT- 104 (216)
T ss_dssp HHHHHTTTSSEEEEEEECCTTSH----HHHHHGGG--E----EEEEEEES-CHHHHHHHHHHTTT----CS-SEEEEEC-
T ss_pred HHHHHcccCCCCcEEEEcCCCCH----HHHHHHHc--C----CEEEEEEC-CHHHHHHHHHhccc----CC-CeEEEEc-
Confidence 34444555677899999999984 45566655 2 47999987 55556655554432 22 4455443
Q ss_pred cCCCCCCccccccCCCCceEEEeecccc-CCCCchHHHHHHH-HhcCCCEEEEEee
Q 048129 229 VTETKDLNEDKFDLNAGEAVAVYSPILL-SRTRHPDFLIKML-RKISPCVMVIIEV 282 (412)
Q Consensus 229 ~~~~e~l~~~~l~~~~~E~laVn~~~~L-~~~~~~~~~L~~v-r~L~P~vvvl~E~ 282 (412)
+..++.++ ..=+.|+.+..+.- ..+..+..+|+.+ +.|+|.-++++..
T Consensus 105 --d~~~~~~~----~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 105 --DILQFSTA----ELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp --CTTTCCCS----CCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred --chhhCCCC----CCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 33333311 11134444433332 3333444556655 7789987777644
No 45
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=86.40 E-value=3.5 Score=40.55 Aligned_cols=145 Identities=14% Similarity=0.083 Sum_probs=81.2
Q ss_pred HHHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc--EEEE
Q 048129 148 QAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP--FSFK 225 (412)
Q Consensus 148 qaIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~--Fef~ 225 (412)
++|++...-.+.-.|+|+|.|.| .+...++.+ |. -++|||+. + ..++.+. +.++..|++ .+|.
T Consensus 53 ~~i~~~~~~~~~~~VLDlGcGtG----~ls~~la~~--g~---~~V~gvD~-s-~~~~~a~----~~~~~~~~~~~v~~~ 117 (376)
T 3r0q_C 53 NAVFQNKHHFEGKTVLDVGTGSG----ILAIWSAQA--GA---RKVYAVEA-T-KMADHAR----ALVKANNLDHIVEVI 117 (376)
T ss_dssp HHHHTTTTTTTTCEEEEESCTTT----HHHHHHHHT--TC---SEEEEEES-S-TTHHHHH----HHHHHTTCTTTEEEE
T ss_pred HHHHhccccCCCCEEEEeccCcC----HHHHHHHhc--CC---CEEEEEcc-H-HHHHHHH----HHHHHcCCCCeEEEE
Confidence 44544444445568999999998 344555655 32 38999997 4 4444443 334556665 4444
Q ss_pred EeecCCCCCCccccccCCCCceEEEeecccc-CCCCchHHHHHHH-HhcCCCEEEEEeecCcCC----CCchHH---HHH
Q 048129 226 IVLVTETKDLNEDKFDLNAGEAVAVYSPILL-SRTRHPDFLIKML-RKISPCVMVIIEVEANHN----SQNFED---RFF 296 (412)
Q Consensus 226 ~v~~~~~e~l~~~~l~~~~~E~laVn~~~~L-~~~~~~~~~L~~v-r~L~P~vvvl~E~ea~~n----~~~F~~---RF~ 296 (412)
. .+++++... ..=+.|+.+.+... .....++.+|+.+ +-|+|.-+++...-.-+. .+.+.. .|.
T Consensus 118 ~---~d~~~~~~~----~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~ 190 (376)
T 3r0q_C 118 E---GSVEDISLP----EKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHARMWLAPIKSNIADRKRNDFD 190 (376)
T ss_dssp E---SCGGGCCCS----SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEEEEEEEEECCTHHHHHHHHHH
T ss_pred E---CchhhcCcC----CcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecCeEEEEeecchHHhhhhhhhh
Confidence 3 334444321 22245665554333 4556678899988 889999888764433221 222221 344
Q ss_pred HHHHHHHHHHHHhhhhcC
Q 048129 297 EVLFHYSASFDCLKVSMA 314 (412)
Q Consensus 297 eaL~~YsalFdsLda~~~ 314 (412)
+.+..+..+++..+....
T Consensus 191 ~~~~~W~~fw~~~~~~~G 208 (376)
T 3r0q_C 191 GAMADWHNFSDEIKSYYG 208 (376)
T ss_dssp HHHHHHHHHHHHHHHSTT
T ss_pred hhhhhhhhhhhccCcccc
Confidence 555555566655454433
No 46
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=85.94 E-value=2.9 Score=39.41 Aligned_cols=105 Identities=8% Similarity=0.063 Sum_probs=56.8
Q ss_pred CeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc--EEEEEeecCCCCCC
Q 048129 158 KRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP--FSFKIVLVTETKDL 235 (412)
Q Consensus 158 ~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~--Fef~~v~~~~~e~l 235 (412)
..-+|+|+|.|.|. +...|+.+ ..| ..++|||+. +...++.+.++ ++..|++ .+|..- +..++
T Consensus 118 ~~~~vLDiGcG~G~----~~~~la~~--~~~-~~~v~gvD~-s~~~~~~a~~~----~~~~~~~~~v~~~~~---d~~~~ 182 (305)
T 3ocj_A 118 PGCVVASVPCGWMS----ELLALDYS--ACP-GVQLVGIDY-DPEALDGATRL----AAGHALAGQITLHRQ---DAWKL 182 (305)
T ss_dssp TTCEEEETTCTTCH----HHHTSCCT--TCT-TCEEEEEES-CHHHHHHHHHH----HTTSTTGGGEEEEEC---CGGGC
T ss_pred CCCEEEEecCCCCH----HHHHHHHh--cCC-CCeEEEEEC-CHHHHHHHHHH----HHhcCCCCceEEEEC---chhcC
Confidence 44679999999884 33444322 123 378999987 54555555444 4456665 555543 23333
Q ss_pred ccccccCCCCceEEEeecccc-CCCCchHHHHHHH-HhcCCCEEEEEe
Q 048129 236 NEDKFDLNAGEAVAVYSPILL-SRTRHPDFLIKML-RKISPCVMVIIE 281 (412)
Q Consensus 236 ~~~~l~~~~~E~laVn~~~~L-~~~~~~~~~L~~v-r~L~P~vvvl~E 281 (412)
.. . ..=+.|+.|..+.- ..+.....+|+.+ +.|+|.-.+++.
T Consensus 183 ~~---~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 226 (305)
T 3ocj_A 183 DT---R-EGYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTS 226 (305)
T ss_dssp CC---C-SCEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred Cc---c-CCeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 21 1 11134443332222 2333333466666 678998888773
No 47
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=85.75 E-value=11 Score=33.95 Aligned_cols=110 Identities=12% Similarity=0.106 Sum_probs=62.8
Q ss_pred hhHHHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEE
Q 048129 146 GTQAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFK 225 (412)
Q Consensus 146 aNqaIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~ 225 (412)
.-+.|++.+...+.-.|+|+|.|.|. +...|+.+ |+ . ++|||+. +...++.+.+++. +-..+|.
T Consensus 32 ~~~~l~~~~~~~~~~~vLD~GcG~G~----~~~~l~~~--~~--~-~v~~vD~-s~~~~~~a~~~~~------~~~~~~~ 95 (253)
T 3g5l_A 32 EWHELKKMLPDFNQKTVLDLGCGFGW----HCIYAAEH--GA--K-KVLGIDL-SERMLTEAKRKTT------SPVVCYE 95 (253)
T ss_dssp HHHHHHTTCCCCTTCEEEEETCTTCH----HHHHHHHT--TC--S-EEEEEES-CHHHHHHHHHHCC------CTTEEEE
T ss_pred hHHHHHHhhhccCCCEEEEECCCCCH----HHHHHHHc--CC--C-EEEEEEC-CHHHHHHHHHhhc------cCCeEEE
Confidence 34556666665567889999999984 55666666 33 2 7999987 5455554444332 2344554
Q ss_pred EeecCCCCCCccccccCCCC--ceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEEe
Q 048129 226 IVLVTETKDLNEDKFDLNAG--EAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVIIE 281 (412)
Q Consensus 226 ~v~~~~~e~l~~~~l~~~~~--E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~E 281 (412)
.. +.+++. ..++ +.|+.+. .+..-.....+|+.+ +.|+|.-.+++.
T Consensus 96 ~~---d~~~~~-----~~~~~fD~v~~~~--~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 96 QK---AIEDIA-----IEPDAYNVVLSSL--ALHYIASFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp EC---CGGGCC-----CCTTCEEEEEEES--CGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred Ec---chhhCC-----CCCCCeEEEEEch--hhhhhhhHHHHHHHHHHHcCCCcEEEEE
Confidence 43 233322 2222 3344333 332223455677666 668998877774
No 48
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=85.33 E-value=3.7 Score=35.97 Aligned_cols=112 Identities=17% Similarity=0.229 Sum_probs=62.8
Q ss_pred HhhHHHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEE
Q 048129 145 AGTQAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSF 224 (412)
Q Consensus 145 taNqaIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef 224 (412)
...+.|++.+.....-+|+|+|.|.|. +...|+.+ | .++|||+. +...++.+.++ .++ +|
T Consensus 39 ~~~~~~~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~--~----~~v~~vD~-s~~~~~~a~~~-------~~~--~~ 98 (227)
T 3e8s_A 39 VTDQAILLAILGRQPERVLDLGCGEGW----LLRALADR--G----IEAVGVDG-DRTLVDAARAA-------GAG--EV 98 (227)
T ss_dssp THHHHHHHHHHHTCCSEEEEETCTTCH----HHHHHHTT--T----CEEEEEES-CHHHHHHHHHT-------CSS--CE
T ss_pred cccHHHHHHhhcCCCCEEEEeCCCCCH----HHHHHHHC--C----CEEEEEcC-CHHHHHHHHHh-------ccc--cc
Confidence 355678888876667899999999983 55667766 2 37999987 44444444333 223 23
Q ss_pred EEeecCCCCCCccccccCCC-CceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEEee
Q 048129 225 KIVLVTETKDLNEDKFDLNA-GEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVIIEV 282 (412)
Q Consensus 225 ~~v~~~~~e~l~~~~l~~~~-~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~E~ 282 (412)
... +..++....+.... =+.|+.+..+. . .....+|+.+ +.|+|.-.+++..
T Consensus 99 ~~~---~~~~~~~~~~~~~~~fD~v~~~~~l~--~-~~~~~~l~~~~~~L~pgG~l~~~~ 152 (227)
T 3e8s_A 99 HLA---SYAQLAEAKVPVGKDYDLICANFALL--H-QDIIELLSAMRTLLVPGGALVIQT 152 (227)
T ss_dssp EEC---CHHHHHTTCSCCCCCEEEEEEESCCC--S-SCCHHHHHHHHHTEEEEEEEEEEE
T ss_pred chh---hHHhhcccccccCCCccEEEECchhh--h-hhHHHHHHHHHHHhCCCeEEEEEe
Confidence 332 22222111111111 14555554444 3 3344566655 7889987777643
No 49
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=84.99 E-value=10 Score=31.80 Aligned_cols=110 Identities=9% Similarity=0.048 Sum_probs=59.7
Q ss_pred HHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEee
Q 048129 149 AIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVL 228 (412)
Q Consensus 149 aIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~ 228 (412)
.+++.+.-...-+|+|+|.|.| .+...|+.+. | ..++|+++. +...++.+.+++ +..|++-.+ .+.
T Consensus 16 ~~~~~~~~~~~~~vldiG~G~G----~~~~~l~~~~---~-~~~v~~vD~-~~~~~~~a~~~~----~~~~~~~~~-~~~ 81 (178)
T 3hm2_A 16 LAISALAPKPHETLWDIGGGSG----SIAIEWLRST---P-QTTAVCFEI-SEERRERILSNA----INLGVSDRI-AVQ 81 (178)
T ss_dssp HHHHHHCCCTTEEEEEESTTTT----HHHHHHHTTS---S-SEEEEEECS-CHHHHHHHHHHH----HTTTCTTSE-EEE
T ss_pred HHHHHhcccCCCeEEEeCCCCC----HHHHHHHHHC---C-CCeEEEEeC-CHHHHHHHHHHH----HHhCCCCCE-EEe
Confidence 3445555455678999999887 3455566653 2 388999987 545555555443 455665223 332
Q ss_pred cCCCCCCccccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEEe
Q 048129 229 VTETKDLNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVIIE 281 (412)
Q Consensus 229 ~~~~e~l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~E 281 (412)
.+..+.+.. . ...=+.++++..+.. ..+++.+ +.|+|.-.+++.
T Consensus 82 ~d~~~~~~~--~-~~~~D~i~~~~~~~~------~~~l~~~~~~L~~gG~l~~~ 126 (178)
T 3hm2_A 82 QGAPRAFDD--V-PDNPDVIFIGGGLTA------PGVFAAAWKRLPVGGRLVAN 126 (178)
T ss_dssp CCTTGGGGG--C-CSCCSEEEECC-TTC------TTHHHHHHHTCCTTCEEEEE
T ss_pred cchHhhhhc--c-CCCCCEEEECCcccH------HHHHHHHHHhcCCCCEEEEE
Confidence 222222211 0 022355655544422 3455555 568998776653
No 50
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=84.89 E-value=11 Score=32.95 Aligned_cols=102 Identities=17% Similarity=0.196 Sum_probs=57.3
Q ss_pred eeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCCCCccc
Q 048129 159 RIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVLVTETKDLNED 238 (412)
Q Consensus 159 ~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~~~~~e~l~~~ 238 (412)
.-+|+|+|.|.|. +...|+.+ +| ++|+|+. +...++.+.+++. ..+...+|... +..++.
T Consensus 39 ~~~vLDlG~G~G~----~~~~l~~~--~~----~v~~vD~-s~~~~~~a~~~~~----~~~~~~~~~~~---d~~~~~-- 98 (227)
T 1ve3_A 39 RGKVLDLACGVGG----FSFLLEDY--GF----EVVGVDI-SEDMIRKAREYAK----SRESNVEFIVG---DARKLS-- 98 (227)
T ss_dssp CCEEEEETCTTSH----HHHHHHHT--TC----EEEEEES-CHHHHHHHHHHHH----HTTCCCEEEEC---CTTSCC--
T ss_pred CCeEEEEeccCCH----HHHHHHHc--CC----EEEEEEC-CHHHHHHHHHHHH----hcCCCceEEEC---chhcCC--
Confidence 5589999999883 44566665 33 7999987 5555555555443 33444455443 233322
Q ss_pred cccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEEe
Q 048129 239 KFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVIIE 281 (412)
Q Consensus 239 ~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~E 281 (412)
+.-..=+.|+.|..+.+........+|+.+ +.|+|.-.+++.
T Consensus 99 -~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~ 141 (227)
T 1ve3_A 99 -FEDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMY 141 (227)
T ss_dssp -SCTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -CCCCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 111122566666554443333345566655 678998666554
No 51
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=84.80 E-value=13 Score=32.92 Aligned_cols=100 Identities=17% Similarity=0.091 Sum_probs=52.8
Q ss_pred CeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCCCCcc
Q 048129 158 KRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVLVTETKDLNE 237 (412)
Q Consensus 158 ~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~~~~~e~l~~ 237 (412)
+.-+|+|+|.|.|. +...|+.+ | .++|||+. +...++.+.++. .+...+|.... ..++.
T Consensus 53 ~~~~vLDiG~G~G~----~~~~l~~~--~----~~v~~vD~-s~~~~~~a~~~~------~~~~~~~~~~d---~~~~~- 111 (242)
T 3l8d_A 53 KEAEVLDVGCGDGY----GTYKLSRT--G----YKAVGVDI-SEVMIQKGKERG------EGPDLSFIKGD---LSSLP- 111 (242)
T ss_dssp TTCEEEEETCTTSH----HHHHHHHT--T----CEEEEEES-CHHHHHHHHTTT------CBTTEEEEECB---TTBCS-
T ss_pred CCCeEEEEcCCCCH----HHHHHHHc--C----CeEEEEEC-CHHHHHHHHhhc------ccCCceEEEcc---hhcCC-
Confidence 44589999999885 45566665 2 36999987 444444433331 12344554432 32322
Q ss_pred ccccCCCCceEEEeeccccCCCCchHHHHHH-HHhcCCCEEEEEee
Q 048129 238 DKFDLNAGEAVAVYSPILLSRTRHPDFLIKM-LRKISPCVMVIIEV 282 (412)
Q Consensus 238 ~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~-vr~L~P~vvvl~E~ 282 (412)
..++..=+|-|...+........+|+. .+.|+|.-.+++..
T Consensus 112 ----~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 153 (242)
T 3l8d_A 112 ----FENEQFEAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAI 153 (242)
T ss_dssp ----SCTTCEEEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ----CCCCCccEEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEE
Confidence 222222233333334222333445555 47889987666644
No 52
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=84.28 E-value=10 Score=34.04 Aligned_cols=108 Identities=11% Similarity=0.158 Sum_probs=58.1
Q ss_pred HHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEee
Q 048129 149 AIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVL 228 (412)
Q Consensus 149 aIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~ 228 (412)
.+++.+.....-+|+|+|.|.|.--..|.+.+ | ..++|||+. +...++.+.++ .-..+|...
T Consensus 24 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~------~--~~~v~~~D~-s~~~~~~a~~~--------~~~~~~~~~- 85 (259)
T 2p35_A 24 DLLAQVPLERVLNGYDLGCGPGNSTELLTDRY------G--VNVITGIDS-DDDMLEKAADR--------LPNTNFGKA- 85 (259)
T ss_dssp HHHTTCCCSCCSSEEEETCTTTHHHHHHHHHH------C--TTSEEEEES-CHHHHHHHHHH--------STTSEEEEC-
T ss_pred HHHHhcCCCCCCEEEEecCcCCHHHHHHHHhC------C--CCEEEEEEC-CHHHHHHHHHh--------CCCcEEEEC-
Confidence 34555544455689999999887554444443 2 146999987 44445544443 223444433
Q ss_pred cCCCCCCccccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEEee
Q 048129 229 VTETKDLNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVIIEV 282 (412)
Q Consensus 229 ~~~~e~l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~E~ 282 (412)
+.+++.++ ..=+.|+.+..+.- -.....+|+.+ +.|+|.-.+++..
T Consensus 86 --d~~~~~~~----~~fD~v~~~~~l~~--~~~~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 86 --DLATWKPA----QKADLLYANAVFQW--VPDHLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp --CTTTCCCS----SCEEEEEEESCGGG--STTHHHHHHHHGGGEEEEEEEEEEE
T ss_pred --ChhhcCcc----CCcCEEEEeCchhh--CCCHHHHHHHHHHhcCCCeEEEEEe
Confidence 23333210 11134444443332 23345667766 7789987666644
No 53
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=84.23 E-value=5.9 Score=35.64 Aligned_cols=104 Identities=17% Similarity=0.244 Sum_probs=58.7
Q ss_pred CCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCCCCc
Q 048129 157 AKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVLVTETKDLN 236 (412)
Q Consensus 157 ~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~~~~~e~l~ 236 (412)
.+.-+|+|+|.|.|. +...|+.+ | .++|||+. +...++.+.+++ +..|+..+|... +..++.
T Consensus 40 ~~~~~vLDlGcG~G~----~~~~l~~~--~----~~v~gvD~-s~~~l~~a~~~~----~~~~~~v~~~~~---d~~~~~ 101 (252)
T 1wzn_A 40 REVRRVLDLACGTGI----PTLELAER--G----YEVVGLDL-HEEMLRVARRKA----KERNLKIEFLQG---DVLEIA 101 (252)
T ss_dssp SCCCEEEEETCTTCH----HHHHHHHT--T----CEEEEEES-CHHHHHHHHHHH----HHTTCCCEEEES---CGGGCC
T ss_pred cCCCEEEEeCCCCCH----HHHHHHHC--C----CeEEEEEC-CHHHHHHHHHHH----HhcCCceEEEEC---Chhhcc
Confidence 445689999999885 34455555 2 37999987 556666665554 334555555443 233322
Q ss_pred cccccCCCCceEEEe-eccccCCCCchHHHHHHH-HhcCCCEEEEEee
Q 048129 237 EDKFDLNAGEAVAVY-SPILLSRTRHPDFLIKML-RKISPCVMVIIEV 282 (412)
Q Consensus 237 ~~~l~~~~~E~laVn-~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~E~ 282 (412)
.. ..=+.|+.+ +.+....+.....+|+.+ +.|+|.-+++++-
T Consensus 102 ~~----~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 102 FK----NEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp CC----SCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cC----CCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEec
Confidence 11 111333332 222222333455667665 6789998888764
No 54
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=83.82 E-value=3.5 Score=36.44 Aligned_cols=114 Identities=16% Similarity=0.166 Sum_probs=61.5
Q ss_pred hhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc-EEEEEeecC
Q 048129 152 ERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP-FSFKIVLVT 230 (412)
Q Consensus 152 eA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~-Fef~~v~~~ 230 (412)
+.+.-...-+|+|+|.|.|. +...|+.+ +| ..++|||+. +...++.+.++..+-++..+++ .+|...
T Consensus 21 ~~l~~~~~~~vLDiGcG~G~----~~~~la~~--~p--~~~v~gvD~-s~~~l~~~~~~a~~~~~~~~~~~v~~~~~--- 88 (218)
T 3mq2_A 21 EQLRSQYDDVVLDVGTGDGK----HPYKVARQ--NP--SRLVVALDA-DKSRMEKISAKAAAKPAKGGLPNLLYLWA--- 88 (218)
T ss_dssp HHHHTTSSEEEEEESCTTCH----HHHHHHHH--CT--TEEEEEEES-CGGGGHHHHHHHTSCGGGTCCTTEEEEEC---
T ss_pred HHhhccCCCEEEEecCCCCH----HHHHHHHH--CC--CCEEEEEEC-CHHHHHHHHHHHHHhhhhcCCCceEEEec---
Confidence 33444556789999999885 33445544 23 378999997 4444554444444444455653 555443
Q ss_pred CCCCCccccccCCCCceEEEeecccc----CCCCchHHHHHHH-HhcCCCEEEEEee
Q 048129 231 ETKDLNEDKFDLNAGEAVAVYSPILL----SRTRHPDFLIKML-RKISPCVMVIIEV 282 (412)
Q Consensus 231 ~~e~l~~~~l~~~~~E~laVn~~~~L----~~~~~~~~~L~~v-r~L~P~vvvl~E~ 282 (412)
+.+++... -.. +.+.++..+.. ..+++ ..+|+.+ +.|+|.-.+++..
T Consensus 89 d~~~l~~~---~~~-d~v~~~~~~~~~~~~~~~~~-~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 89 TAERLPPL---SGV-GELHVLMPWGSLLRGVLGSS-PEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp CSTTCCSC---CCE-EEEEEESCCHHHHHHHHTSS-SHHHHHHHHTEEEEEEEEEEE
T ss_pred chhhCCCC---CCC-CEEEEEccchhhhhhhhccH-HHHHHHHHHHcCCCcEEEEEe
Confidence 34443321 112 33433332211 11223 3455555 7789998888744
No 55
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=83.43 E-value=4 Score=39.34 Aligned_cols=110 Identities=5% Similarity=-0.020 Sum_probs=58.9
Q ss_pred HHHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCC--cEEEE
Q 048129 148 QAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNL--PFSFK 225 (412)
Q Consensus 148 qaIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv--~Fef~ 225 (412)
..|++.+.-.+.-+|+|+|.|.|. +...|+.+. | .+++|+++. + ..+. .+.++..++ ..+|.
T Consensus 174 ~~~~~~~~~~~~~~vLDvG~G~G~----~~~~l~~~~---p-~~~~~~~D~-~-~~~~------~~~~~~~~~~~~v~~~ 237 (348)
T 3lst_A 174 LILARAGDFPATGTVADVGGGRGG----FLLTVLREH---P-GLQGVLLDR-A-EVVA------RHRLDAPDVAGRWKVV 237 (348)
T ss_dssp HHHHHHSCCCSSEEEEEETCTTSH----HHHHHHHHC---T-TEEEEEEEC-H-HHHT------TCCCCCGGGTTSEEEE
T ss_pred HHHHHhCCccCCceEEEECCccCH----HHHHHHHHC---C-CCEEEEecC-H-HHhh------cccccccCCCCCeEEE
Confidence 356666654567899999999985 445555542 3 489999986 2 2111 111222233 35665
Q ss_pred EeecCCCCCCccccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEE-ee
Q 048129 226 IVLVTETKDLNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVII-EV 282 (412)
Q Consensus 226 ~v~~~~~e~l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~-E~ 282 (412)
.-.. .+.+ . .-++++.+..++--.......+|+.+ +.|+|.-.+++ |.
T Consensus 238 ~~d~--~~~~-----p--~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~ 287 (348)
T 3lst_A 238 EGDF--LREV-----P--HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDA 287 (348)
T ss_dssp ECCT--TTCC-----C--CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEEC
T ss_pred ecCC--CCCC-----C--CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 5321 1111 1 23455555554432222234677766 67899765544 44
No 56
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=82.71 E-value=4.6 Score=34.88 Aligned_cols=111 Identities=13% Similarity=0.134 Sum_probs=63.4
Q ss_pred CeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCC-cEEEEEeecCCCCCCc
Q 048129 158 KRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNL-PFSFKIVLVTETKDLN 236 (412)
Q Consensus 158 ~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv-~Fef~~v~~~~~e~l~ 236 (412)
+.-+|+|+|.|.|.- ...++.++ .-++|||+. +...++.+.+++ +..|+ ..+|.. .+..++.
T Consensus 44 ~~~~vLDlgcG~G~~----~~~~~~~~-----~~~v~~vD~-~~~~~~~a~~~~----~~~~~~~v~~~~---~d~~~~~ 106 (189)
T 3p9n_A 44 TGLAVLDLYAGSGAL----GLEALSRG-----AASVLFVES-DQRSAAVIARNI----EALGLSGATLRR---GAVAAVV 106 (189)
T ss_dssp TTCEEEEETCTTCHH----HHHHHHTT-----CSEEEEEEC-CHHHHHHHHHHH----HHHTCSCEEEEE---SCHHHHH
T ss_pred CCCEEEEeCCCcCHH----HHHHHHCC-----CCeEEEEEC-CHHHHHHHHHHH----HHcCCCceEEEE---ccHHHHH
Confidence 345799999998842 22233442 257999987 555565555544 33455 344433 2232221
Q ss_pred cccccCCCCceEEEeeccccCCCCchHHHHHHHHh---cCCCEEEEEeecCcCC
Q 048129 237 EDKFDLNAGEAVAVYSPILLSRTRHPDFLIKMLRK---ISPCVMVIIEVEANHN 287 (412)
Q Consensus 237 ~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~vr~---L~P~vvvl~E~ea~~n 287 (412)
.. +.-..=+.|+.|.++... ....+.+++.+++ |+|.-+++++.+....
T Consensus 107 ~~-~~~~~fD~i~~~~p~~~~-~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~~ 158 (189)
T 3p9n_A 107 AA-GTTSPVDLVLADPPYNVD-SADVDAILAALGTNGWTREGTVAVVERATTCA 158 (189)
T ss_dssp HH-CCSSCCSEEEECCCTTSC-HHHHHHHHHHHHHSSSCCTTCEEEEEEETTSC
T ss_pred hh-ccCCCccEEEECCCCCcc-hhhHHHHHHHHHhcCccCCCeEEEEEecCCCC
Confidence 11 111223577777665431 1345667777765 9999999998776554
No 57
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=82.62 E-value=4.3 Score=41.27 Aligned_cols=120 Identities=7% Similarity=0.031 Sum_probs=68.5
Q ss_pred HHHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHH---HHHHhcCCc-EE
Q 048129 148 QAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLA---YFAETWNLP-FS 223 (412)
Q Consensus 148 qaIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~---~fA~~lgv~-Fe 223 (412)
..|++.+.-...=+|+|+|.|.|. +.-.+|.+.+ .-+++||+. +...++.+.+++. +.++..|+. -.
T Consensus 163 ~~il~~l~l~~gd~VLDLGCGtG~----l~l~lA~~~g----~~kVvGIDi-S~~~lelAr~n~e~frkr~~~~Gl~~~r 233 (438)
T 3uwp_A 163 AQMIDEIKMTDDDLFVDLGSGVGQ----VVLQVAAATN----CKHHYGVEK-ADIPAKYAETMDREFRKWMKWYGKKHAE 233 (438)
T ss_dssp HHHHHHHCCCTTCEEEEESCTTSH----HHHHHHHHCC----CSEEEEEEC-CHHHHHHHHHHHHHHHHHHHHHTBCCCE
T ss_pred HHHHHhcCCCCCCEEEEeCCCCCH----HHHHHHHHCC----CCEEEEEeC-CHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 456666654455679999998884 3334444431 247999987 4444554444443 345666762 23
Q ss_pred EEEeecCCCCCCccccccCCCCceEEEeeccccCCCCchHHHHHHHHhcCCCEEEEE
Q 048129 224 FKIVLVTETKDLNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKMLRKISPCVMVII 280 (412)
Q Consensus 224 f~~v~~~~~e~l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~vr~L~P~vvvl~ 280 (412)
+..+. .++.++.... .+..-++|++|..+. .++....+....|.|+|.-.+++
T Consensus 234 Vefi~-GD~~~lp~~d-~~~~aDVVf~Nn~~F--~pdl~~aL~Ei~RvLKPGGrIVs 286 (438)
T 3uwp_A 234 YTLER-GDFLSEEWRE-RIANTSVIFVNNFAF--GPEVDHQLKERFANMKEGGRIVS 286 (438)
T ss_dssp EEEEE-CCTTSHHHHH-HHHTCSEEEECCTTC--CHHHHHHHHHHHTTSCTTCEEEE
T ss_pred eEEEE-CcccCCcccc-ccCCccEEEEccccc--CchHHHHHHHHHHcCCCCcEEEE
Confidence 44443 3444433211 012335777776542 34455566667789999988776
No 58
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=82.33 E-value=7.3 Score=32.66 Aligned_cols=104 Identities=15% Similarity=0.176 Sum_probs=58.9
Q ss_pred HHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc-EEEEEee
Q 048129 150 IIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP-FSFKIVL 228 (412)
Q Consensus 150 IleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~-Fef~~v~ 228 (412)
|++.+.-.+.-+|+|+|.|.|. +...|+. + ..++|||+. +...++.+.+++ +..|++ .+|..
T Consensus 27 ~~~~~~~~~~~~vLdiG~G~G~----~~~~l~~-----~-~~~v~~vD~-~~~~~~~a~~~~----~~~~~~~~~~~~-- 89 (183)
T 2yxd_A 27 SIGKLNLNKDDVVVDVGCGSGG----MTVEIAK-----R-CKFVYAIDY-LDGAIEVTKQNL----AKFNIKNCQIIK-- 89 (183)
T ss_dssp HHHHHCCCTTCEEEEESCCCSH----HHHHHHT-----T-SSEEEEEEC-SHHHHHHHHHHH----HHTTCCSEEEEE--
T ss_pred HHHHcCCCCCCEEEEeCCCCCH----HHHHHHh-----c-CCeEEEEeC-CHHHHHHHHHHH----HHcCCCcEEEEE--
Confidence 3444443445589999999887 3344444 2 368999987 445555555443 445553 44433
Q ss_pred cCCCCCCccccccCCCCceEEEeeccccCCCCchHHHHHHHHhcCCCEEEEEee
Q 048129 229 VTETKDLNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKMLRKISPCVMVIIEV 282 (412)
Q Consensus 229 ~~~~e~l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~vr~L~P~vvvl~E~ 282 (412)
.++.+. +.-..=+.++.+.. .....+|+.++++ |.-.+++..
T Consensus 90 -~d~~~~----~~~~~~D~i~~~~~------~~~~~~l~~~~~~-~gG~l~~~~ 131 (183)
T 2yxd_A 90 -GRAEDV----LDKLEFNKAFIGGT------KNIEKIIEILDKK-KINHIVANT 131 (183)
T ss_dssp -SCHHHH----GGGCCCSEEEECSC------SCHHHHHHHHHHT-TCCEEEEEE
T ss_pred -CCcccc----ccCCCCcEEEECCc------ccHHHHHHHHhhC-CCCEEEEEe
Confidence 223221 11112245555443 5567899999999 876655543
No 59
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=80.40 E-value=11 Score=33.65 Aligned_cols=101 Identities=11% Similarity=-0.008 Sum_probs=55.4
Q ss_pred eEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCCCCcccc
Q 048129 160 IHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVLVTETKDLNEDK 239 (412)
Q Consensus 160 vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~~~~~e~l~~~~ 239 (412)
-.|+|+|.|.|. +...|+. + ..++|||+. +...++.+.+++.+.- ..-..+|... ++.++.++.
T Consensus 68 ~~vLDiGcG~G~----~~~~l~~-----~-~~~v~gvD~-s~~~~~~a~~~~~~~~--~~~~v~~~~~---d~~~~~~~~ 131 (235)
T 3lcc_A 68 GRALVPGCGGGH----DVVAMAS-----P-ERFVVGLDI-SESALAKANETYGSSP--KAEYFSFVKE---DVFTWRPTE 131 (235)
T ss_dssp EEEEEETCTTCH----HHHHHCB-----T-TEEEEEECS-CHHHHHHHHHHHTTSG--GGGGEEEECC---CTTTCCCSS
T ss_pred CCEEEeCCCCCH----HHHHHHh-----C-CCeEEEEEC-CHHHHHHHHHHhhccC--CCcceEEEEC---chhcCCCCC
Confidence 499999999884 3334543 2 268999987 5555665555443210 1122444433 333332211
Q ss_pred ccCCCCceEEEeeccccCCCCchHHHHHHHH-hcCCCEEEEE
Q 048129 240 FDLNAGEAVAVYSPILLSRTRHPDFLIKMLR-KISPCVMVII 280 (412)
Q Consensus 240 l~~~~~E~laVn~~~~L~~~~~~~~~L~~vr-~L~P~vvvl~ 280 (412)
.=+.|+.+..+.--.+.....+|+.++ .|+|.-.+++
T Consensus 132 ----~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 169 (235)
T 3lcc_A 132 ----LFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELIT 169 (235)
T ss_dssp ----CEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEE
T ss_pred ----CeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEE
Confidence 113444444433333446667777774 5899877775
No 60
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=80.24 E-value=22 Score=33.61 Aligned_cols=107 Identities=11% Similarity=0.142 Sum_probs=58.6
Q ss_pred eeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCC-------cEEEEEeecCC
Q 048129 159 RIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNL-------PFSFKIVLVTE 231 (412)
Q Consensus 159 ~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv-------~Fef~~v~~~~ 231 (412)
.-+|+|+|.|.|.- +..++.+. + -++|||+. +...++.+.++..+ .++ .++|....+.
T Consensus 49 ~~~VLDlGCG~G~~----l~~~~~~~-~----~~v~GiD~-S~~~l~~A~~~~~~----~~~~~~~~~~~~~f~~~d~~- 113 (302)
T 2vdw_A 49 KRKVLAIDFGNGAD----LEKYFYGE-I----ALLVATDP-DADAIARGNERYNK----LNSGIKTKYYKFDYIQETIR- 113 (302)
T ss_dssp CCEEEETTCTTTTT----HHHHHHTT-C----SEEEEEES-CHHHHHHHHHHHHH----HCC----CCCEEEEEECCTT-
T ss_pred CCeEEEEecCCcHh----HHHHHhcC-C----CeEEEEEC-CHHHHHHHHHHHHh----ccccccccccccchhhhhcc-
Confidence 46899999998852 22233332 1 36999997 66778877776543 233 2455543211
Q ss_pred CCCCcccccc--CCCCceEEEeecccc---CCCCchHHHHHHH-HhcCCCEEEEEe
Q 048129 232 TKDLNEDKFD--LNAGEAVAVYSPILL---SRTRHPDFLIKML-RKISPCVMVIIE 281 (412)
Q Consensus 232 ~e~l~~~~l~--~~~~E~laVn~~~~L---~~~~~~~~~L~~v-r~L~P~vvvl~E 281 (412)
.+.....+. ..++..=+|.|.+.+ -.+..++.+|+.+ +.|+|.-++++.
T Consensus 114 -~d~~~~~l~~~~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~ 168 (302)
T 2vdw_A 114 -SDTFVSSVREVFYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLIT 168 (302)
T ss_dssp -SSSHHHHHHTTCCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred -cchhhhhhhccccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 111001110 122333345565555 1223456777777 779998777663
No 61
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=79.50 E-value=10 Score=36.69 Aligned_cols=116 Identities=9% Similarity=0.046 Sum_probs=67.9
Q ss_pred HHHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc--EEEE
Q 048129 148 QAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP--FSFK 225 (412)
Q Consensus 148 qaIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~--Fef~ 225 (412)
++|++...-.+.-.|+|+|.|.|. +...|+.+ | .-++|||+.. ..++.+.+ .++..|++ .+|.
T Consensus 56 ~~i~~~~~~~~~~~VLDvGcG~G~----~~~~la~~--g---~~~v~gvD~s--~~l~~a~~----~~~~~~~~~~v~~~ 120 (349)
T 3q7e_A 56 NSMFHNRHLFKDKVVLDVGSGTGI----LCMFAAKA--G---ARKVIGIECS--SISDYAVK----IVKANKLDHVVTII 120 (349)
T ss_dssp HHHHTCHHHHTTCEEEEESCTTSH----HHHHHHHT--T---CSEEEEEECS--THHHHHHH----HHHHTTCTTTEEEE
T ss_pred HHHHhccccCCCCEEEEEeccchH----HHHHHHHC--C---CCEEEEECcH--HHHHHHHH----HHHHcCCCCcEEEE
Confidence 345544332344579999999984 45566666 2 2589999974 34444443 34455665 5554
Q ss_pred EeecCCCCCCccccccCCCCceEEEeeccc-cCCCCchHHHHHHH-HhcCCCEEEEEeecC
Q 048129 226 IVLVTETKDLNEDKFDLNAGEAVAVYSPIL-LSRTRHPDFLIKML-RKISPCVMVIIEVEA 284 (412)
Q Consensus 226 ~v~~~~~e~l~~~~l~~~~~E~laVn~~~~-L~~~~~~~~~L~~v-r~L~P~vvvl~E~ea 284 (412)
.- +++++... -..=+.|+.+.+.. +......+.+|+.+ |-|+|.-+++.+...
T Consensus 121 ~~---d~~~~~~~---~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~ 175 (349)
T 3q7e_A 121 KG---KVEEVELP---VEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFPDRAT 175 (349)
T ss_dssp ES---CTTTCCCS---SSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESCEEE
T ss_pred EC---cHHHccCC---CCceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEEccccce
Confidence 43 34444211 11224555554433 35566778888887 789999888754433
No 62
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=79.29 E-value=14 Score=32.43 Aligned_cols=106 Identities=18% Similarity=0.146 Sum_probs=60.4
Q ss_pred eEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCC---cEEEEEeecCCCCCCc
Q 048129 160 IHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNL---PFSFKIVLVTETKDLN 236 (412)
Q Consensus 160 vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv---~Fef~~v~~~~~e~l~ 236 (412)
-.|+|+|.|.|.-= ..++.+ |+ -++|||+. +...++.+.+++ +..|+ ..+|..- +..++.
T Consensus 55 ~~vLDlGcGtG~~~----~~~~~~--~~---~~v~gvD~-s~~~l~~a~~~~----~~~~~~~~~v~~~~~---d~~~~~ 117 (201)
T 2ift_A 55 SECLDGFAGSGSLG----FEALSR--QA---KKVTFLEL-DKTVANQLKKNL----QTLKCSSEQAEVINQ---SSLDFL 117 (201)
T ss_dssp CEEEETTCTTCHHH----HHHHHT--TC---SEEEEECS-CHHHHHHHHHHH----HHTTCCTTTEEEECS---CHHHHT
T ss_pred CeEEEcCCccCHHH----HHHHHc--cC---CEEEEEEC-CHHHHHHHHHHH----HHhCCCccceEEEEC---CHHHHH
Confidence 47999999988532 223334 22 47999987 555566555554 34565 3444332 222211
Q ss_pred cccccCCC-CceEEEeeccccCCCCchHHHHHHHHh---cCCCEEEEEeecCcC
Q 048129 237 EDKFDLNA-GEAVAVYSPILLSRTRHPDFLIKMLRK---ISPCVMVIIEVEANH 286 (412)
Q Consensus 237 ~~~l~~~~-~E~laVn~~~~L~~~~~~~~~L~~vr~---L~P~vvvl~E~ea~~ 286 (412)
+. +.-.. =+.|+.|.++. .+..+.+++.+.+ |+|.-+++++.....
T Consensus 118 ~~-~~~~~~fD~I~~~~~~~---~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 118 KQ-PQNQPHFDVVFLDPPFH---FNLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp TS-CCSSCCEEEEEECCCSS---SCHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred Hh-hccCCCCCEEEECCCCC---CccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 11 00112 24666666653 3456778888865 999988887766554
No 63
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=79.27 E-value=14 Score=32.07 Aligned_cols=109 Identities=12% Similarity=0.110 Sum_probs=61.4
Q ss_pred HHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc-EEEEEe
Q 048129 149 AIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP-FSFKIV 227 (412)
Q Consensus 149 aIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~-Fef~~v 227 (412)
.+++.+.-.+.-+|+|+|.|.|. +...|+.+ +| ..++|+|+. +...++.+.+++. ..|++ ++|..-
T Consensus 31 ~~l~~l~~~~~~~vLDiG~G~G~----~~~~la~~--~~--~~~v~~vD~-s~~~~~~a~~~~~----~~~~~~v~~~~~ 97 (204)
T 3e05_A 31 VTLSKLRLQDDLVMWDIGAGSAS----VSIEASNL--MP--NGRIFALER-NPQYLGFIRDNLK----KFVARNVTLVEA 97 (204)
T ss_dssp HHHHHTTCCTTCEEEEETCTTCH----HHHHHHHH--CT--TSEEEEEEC-CHHHHHHHHHHHH----HHTCTTEEEEEC
T ss_pred HHHHHcCCCCCCEEEEECCCCCH----HHHHHHHH--CC--CCEEEEEeC-CHHHHHHHHHHHH----HhCCCcEEEEeC
Confidence 34555555556789999999886 33445554 33 378999987 5555665555543 34553 444332
Q ss_pred ecCCCCCCccccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEEe
Q 048129 228 LVTETKDLNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVIIE 281 (412)
Q Consensus 228 ~~~~~e~l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~E 281 (412)
+..+.... ...=+.++++..+. ....+|+.+ +.|+|.-.+++.
T Consensus 98 ---d~~~~~~~---~~~~D~i~~~~~~~-----~~~~~l~~~~~~LkpgG~l~~~ 141 (204)
T 3e05_A 98 ---FAPEGLDD---LPDPDRVFIGGSGG-----MLEEIIDAVDRRLKSEGVIVLN 141 (204)
T ss_dssp ---CTTTTCTT---SCCCSEEEESCCTT-----CHHHHHHHHHHHCCTTCEEEEE
T ss_pred ---Chhhhhhc---CCCCCEEEECCCCc-----CHHHHHHHHHHhcCCCeEEEEE
Confidence 22111111 12224555554332 455666665 668998877764
No 64
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=79.25 E-value=28 Score=29.97 Aligned_cols=93 Identities=15% Similarity=0.131 Sum_probs=55.8
Q ss_pred CeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCCCCcc
Q 048129 158 KRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVLVTETKDLNE 237 (412)
Q Consensus 158 ~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~~~~~e~l~~ 237 (412)
+.-+|+|+|.|.|. +...|+.+ |+ -++|||+. +...++.+.++ ++..|+..+|.. .+..++.
T Consensus 49 ~~~~vlD~g~G~G~----~~~~l~~~--~~---~~v~~vD~-~~~~~~~a~~~----~~~~~~~~~~~~---~d~~~~~- 110 (207)
T 1wy7_A 49 EGKVVADLGAGTGV----LSYGALLL--GA---KEVICVEV-DKEAVDVLIEN----LGEFKGKFKVFI---GDVSEFN- 110 (207)
T ss_dssp TTCEEEEETCTTCH----HHHHHHHT--TC---SEEEEEES-CHHHHHHHHHH----TGGGTTSEEEEE---SCGGGCC-
T ss_pred CcCEEEEeeCCCCH----HHHHHHHc--CC---CEEEEEEC-CHHHHHHHHHH----HHHcCCCEEEEE---CchHHcC-
Confidence 34589999999987 44556655 22 27999987 44555544443 344566544443 3333332
Q ss_pred ccccCCCCceEEEeeccccCCCCchHHHHHHHHhcC
Q 048129 238 DKFDLNAGEAVAVYSPILLSRTRHPDFLIKMLRKIS 273 (412)
Q Consensus 238 ~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~vr~L~ 273 (412)
..=+.|+.|.++..........+|+.+.++-
T Consensus 111 -----~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l 141 (207)
T 1wy7_A 111 -----SRVDIVIMNPPFGSQRKHADRPFLLKAFEIS 141 (207)
T ss_dssp -----CCCSEEEECCCCSSSSTTTTHHHHHHHHHHC
T ss_pred -----CCCCEEEEcCCCccccCCchHHHHHHHHHhc
Confidence 1236888888877644444456777766555
No 65
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=79.20 E-value=10 Score=36.60 Aligned_cols=112 Identities=16% Similarity=0.132 Sum_probs=63.8
Q ss_pred HHHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc--EEEE
Q 048129 148 QAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP--FSFK 225 (412)
Q Consensus 148 qaIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~--Fef~ 225 (412)
++|++.+.-.+.-+|+|+|.|.|. |...++.++ .-++|||+.. . .++.+. +.++..|++ .+|
T Consensus 40 ~~i~~~l~~~~~~~VLDiGcGtG~----ls~~la~~g-----~~~V~~vD~s-~-~~~~a~----~~~~~~~l~~~v~~- 103 (348)
T 2y1w_A 40 RAILQNHTDFKDKIVLDVGCGSGI----LSFFAAQAG-----ARKIYAVEAS-T-MAQHAE----VLVKSNNLTDRIVV- 103 (348)
T ss_dssp HHHHHTGGGTTTCEEEEETCTTSH----HHHHHHHTT-----CSEEEEEECS-T-HHHHHH----HHHHHTTCTTTEEE-
T ss_pred HHHHhccccCCcCEEEEcCCCccH----HHHHHHhCC-----CCEEEEECCH-H-HHHHHH----HHHHHcCCCCcEEE-
Confidence 677777765566699999999875 455566552 2589999873 2 333333 333444553 444
Q ss_pred EeecCCCCCCccccccCCCCceEEEeeccc-cCCCCchHHHHHHHHhcCCCEEEEEe
Q 048129 226 IVLVTETKDLNEDKFDLNAGEAVAVYSPIL-LSRTRHPDFLIKMLRKISPCVMVIIE 281 (412)
Q Consensus 226 ~v~~~~~e~l~~~~l~~~~~E~laVn~~~~-L~~~~~~~~~L~~vr~L~P~vvvl~E 281 (412)
+. .+.+++... ..=+.|+.+.++. +..+...+.+...-+.|+|.-+++..
T Consensus 104 -~~-~d~~~~~~~----~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 104 -IP-GKVEEVSLP----EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp -EE-SCTTTCCCS----SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred -EE-cchhhCCCC----CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 32 334444211 1114555554433 23344455555556889999888754
No 66
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=79.14 E-value=21 Score=32.37 Aligned_cols=112 Identities=10% Similarity=0.034 Sum_probs=63.6
Q ss_pred HhhHHHHhhhh-cCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc--
Q 048129 145 AGTQAIIERVA-SAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP-- 221 (412)
Q Consensus 145 taNqaIleA~~-g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~-- 221 (412)
.....+++.+. -...-+|+|+|.|.|. +...|+.++ ..++|||+. +...++.+.++ ++..|++
T Consensus 32 ~~~~~~l~~l~~~~~~~~vLDiGcG~G~----~~~~la~~~-----~~~v~gvD~-s~~~~~~a~~~----~~~~~~~~~ 97 (267)
T 3kkz_A 32 EVTLKALSFIDNLTEKSLIADIGCGTGG----QTMVLAGHV-----TGQVTGLDF-LSGFIDIFNRN----ARQSGLQNR 97 (267)
T ss_dssp HHHHHHHTTCCCCCTTCEEEEETCTTCH----HHHHHHTTC-----SSEEEEEES-CHHHHHHHHHH----HHHTTCTTT
T ss_pred HHHHHHHHhcccCCCCCEEEEeCCCCCH----HHHHHHhcc-----CCEEEEEeC-CHHHHHHHHHH----HHHcCCCcC
Confidence 33344555555 2445789999998774 556677662 268999987 54555555444 4455765
Q ss_pred EEEEEeecCCCCCCccccccCCCC--ceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEEe
Q 048129 222 FSFKIVLVTETKDLNEDKFDLNAG--EAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVIIE 281 (412)
Q Consensus 222 Fef~~v~~~~~e~l~~~~l~~~~~--E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~E 281 (412)
.+|... +++++. ..++ +.|+.+.++.-- ..+.+|+.+ +.|+|.-.+++.
T Consensus 98 v~~~~~---d~~~~~-----~~~~~fD~i~~~~~~~~~---~~~~~l~~~~~~LkpgG~l~~~ 149 (267)
T 3kkz_A 98 VTGIVG---SMDDLP-----FRNEELDLIWSEGAIYNI---GFERGLNEWRKYLKKGGYLAVS 149 (267)
T ss_dssp EEEEEC---CTTSCC-----CCTTCEEEEEESSCGGGT---CHHHHHHHHGGGEEEEEEEEEE
T ss_pred cEEEEc---ChhhCC-----CCCCCEEEEEEcCCceec---CHHHHHHHHHHHcCCCCEEEEE
Confidence 666543 333332 1122 344443333222 345566666 678998766653
No 67
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=79.01 E-value=2.5 Score=39.66 Aligned_cols=116 Identities=15% Similarity=0.088 Sum_probs=60.9
Q ss_pred HHHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEe
Q 048129 148 QAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIV 227 (412)
Q Consensus 148 qaIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v 227 (412)
..+++.+..... .|+|+|.|.|. +...|+.+ | .++|||+. +...++.+.+++.+.--.+.-..+|..-
T Consensus 73 ~~~~~~~~~~~~-~vLDlGcG~G~----~~~~l~~~--~----~~v~gvD~-s~~~~~~a~~~~~~~~~~~~~~v~~~~~ 140 (299)
T 3g2m_A 73 REFATRTGPVSG-PVLELAAGMGR----LTFPFLDL--G----WEVTALEL-STSVLAAFRKRLAEAPADVRDRCTLVQG 140 (299)
T ss_dssp HHHHHHHCCCCS-CEEEETCTTTT----THHHHHTT--T----CCEEEEES-CHHHHHHHHHHHHTSCHHHHTTEEEEEC
T ss_pred HHHHHhhCCCCC-cEEEEeccCCH----HHHHHHHc--C----CeEEEEEC-CHHHHHHHHHHHhhcccccccceEEEeC
Confidence 344555543333 89999999997 44556655 2 36999987 5555666655543321111134555543
Q ss_pred ecCCCCCCccccccCCCCceEEEe-eccccCCCCchHHHHHHH-HhcCCCEEEEEee
Q 048129 228 LVTETKDLNEDKFDLNAGEAVAVY-SPILLSRTRHPDFLIKML-RKISPCVMVIIEV 282 (412)
Q Consensus 228 ~~~~~e~l~~~~l~~~~~E~laVn-~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~E~ 282 (412)
. +.++..+ ..=+.|++. ..+....+..+..+|+.+ +.|+|.-.++++.
T Consensus 141 d---~~~~~~~----~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 190 (299)
T 3g2m_A 141 D---MSAFALD----KRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSL 190 (299)
T ss_dssp B---TTBCCCS----CCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred c---hhcCCcC----CCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 3 3333210 111223322 222222223456777766 6789987777653
No 68
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=78.68 E-value=5.9 Score=36.59 Aligned_cols=118 Identities=14% Similarity=0.123 Sum_probs=61.2
Q ss_pred HHHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcC-CcEEEEE
Q 048129 148 QAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWN-LPFSFKI 226 (412)
Q Consensus 148 qaIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lg-v~Fef~~ 226 (412)
+.|++.+.....-+|+|+|.|.|. +...|+.+ | .++|||+. +...++.+.+++.+.....+ ..++|..
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~--~----~~v~gvD~-s~~~l~~a~~~~~~~~~~~~~~~~~~~~ 115 (293)
T 3thr_A 47 AWLLGLLRQHGCHRVLDVACGTGV----DSIMLVEE--G----FSVTSVDA-SDKMLKYALKERWNRRKEPAFDKWVIEE 115 (293)
T ss_dssp HHHHHHHHHTTCCEEEETTCTTSH----HHHHHHHT--T----CEEEEEES-CHHHHHHHHHHHHHTTTSHHHHTCEEEE
T ss_pred HHHHHHhcccCCCEEEEecCCCCH----HHHHHHHC--C----CeEEEEEC-CHHHHHHHHHhhhhcccccccceeeEee
Confidence 344455554556789999999985 34455555 3 27999987 55666666655433221111 1233332
Q ss_pred eecCCCCCCccccccCCCC--ceEEEe--eccccCC----CCchHHHHHHH-HhcCCCEEEEEe
Q 048129 227 VLVTETKDLNEDKFDLNAG--EAVAVY--SPILLSR----TRHPDFLIKML-RKISPCVMVIIE 281 (412)
Q Consensus 227 v~~~~~e~l~~~~l~~~~~--E~laVn--~~~~L~~----~~~~~~~L~~v-r~L~P~vvvl~E 281 (412)
.++.++..+. ..++ +.|+.+ +...+.. ......+|+.+ +.|+|.-.++++
T Consensus 116 ---~d~~~~~~~~--~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (293)
T 3thr_A 116 ---ANWLTLDKDV--PAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVID 174 (293)
T ss_dssp ---CCGGGHHHHS--CCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred ---cChhhCcccc--ccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 2233332111 1222 333332 2222222 23356677766 668998776664
No 69
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=78.50 E-value=9.1 Score=33.22 Aligned_cols=109 Identities=17% Similarity=0.149 Sum_probs=57.5
Q ss_pred hHHHHhhhh-cCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcC-CcEEE
Q 048129 147 TQAIIERVA-SAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWN-LPFSF 224 (412)
Q Consensus 147 NqaIleA~~-g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lg-v~Fef 224 (412)
...+++.+. -...-+|+|+|.|.|. +...|+.+ | .++|||+. +...++. |+..| -..+|
T Consensus 34 ~~~~~~~l~~~~~~~~vLdiG~G~G~----~~~~l~~~--~----~~v~~~D~-s~~~~~~--------a~~~~~~~~~~ 94 (218)
T 3ou2_A 34 APAALERLRAGNIRGDVLELASGTGY----WTRHLSGL--A----DRVTALDG-SAEMIAE--------AGRHGLDNVEF 94 (218)
T ss_dssp HHHHHHHHTTTTSCSEEEEESCTTSH----HHHHHHHH--S----SEEEEEES-CHHHHHH--------HGGGCCTTEEE
T ss_pred HHHHHHHHhcCCCCCeEEEECCCCCH----HHHHHHhc--C----CeEEEEeC-CHHHHHH--------HHhcCCCCeEE
Confidence 455667665 2334599999999886 44555555 2 47999987 4333333 33345 33555
Q ss_pred EEeecCCCCCCccccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEEe
Q 048129 225 KIVLVTETKDLNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVIIE 281 (412)
Q Consensus 225 ~~v~~~~~e~l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~E 281 (412)
... +..++. .-..=+.|+.+..+.--....+..+|+.+ +.|+|.-.+++.
T Consensus 95 ~~~---d~~~~~----~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 145 (218)
T 3ou2_A 95 RQQ---DLFDWT----PDRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFV 145 (218)
T ss_dssp EEC---CTTSCC----CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred Eec---ccccCC----CCCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 443 233331 11111344444333222222245666665 678997666553
No 70
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=78.39 E-value=3.9 Score=39.47 Aligned_cols=116 Identities=14% Similarity=0.147 Sum_probs=67.4
Q ss_pred hhHHHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEE
Q 048129 146 GTQAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFK 225 (412)
Q Consensus 146 aNqaIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~ 225 (412)
..+.+++.+.....-+|+|+|.|.|.- ...|+.+ +| ..++|+|+. +...++.+.+++ +..|+..+|.
T Consensus 184 ~~~~ll~~l~~~~~~~VLDlGcG~G~~----~~~la~~--~~--~~~v~~vD~-s~~~l~~a~~~~----~~~~~~~~~~ 250 (343)
T 2pjd_A 184 GSQLLLSTLTPHTKGKVLDVGCGAGVL----SVAFARH--SP--KIRLTLCDV-SAPAVEASRATL----AANGVEGEVF 250 (343)
T ss_dssp HHHHHHHHSCTTCCSBCCBTTCTTSHH----HHHHHHH--CT--TCBCEEEES-BHHHHHHHHHHH----HHTTCCCEEE
T ss_pred HHHHHHHhcCcCCCCeEEEecCccCHH----HHHHHHH--CC--CCEEEEEEC-CHHHHHHHHHHH----HHhCCCCEEE
Confidence 356778877433344799999998863 3344444 33 368999987 555566555554 3356665553
Q ss_pred EeecCCCCCCccccccCCCCceEEEeeccccC---CCCchHHHHHHH-HhcCCCEEEEEee
Q 048129 226 IVLVTETKDLNEDKFDLNAGEAVAVYSPILLS---RTRHPDFLIKML-RKISPCVMVIIEV 282 (412)
Q Consensus 226 ~v~~~~~e~l~~~~l~~~~~E~laVn~~~~L~---~~~~~~~~L~~v-r~L~P~vvvl~E~ 282 (412)
. .+..+... ..=+.|+.|.+|+.. .......+|+.+ +.|+|.-.+++..
T Consensus 251 --~-~d~~~~~~-----~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 303 (343)
T 2pjd_A 251 --A-SNVFSEVK-----GRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVA 303 (343)
T ss_dssp --E-CSTTTTCC-----SCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred --E-cccccccc-----CCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 2 22221111 122577777776531 122345666666 6689988777654
No 71
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=77.98 E-value=7.7 Score=34.37 Aligned_cols=103 Identities=14% Similarity=0.159 Sum_probs=57.8
Q ss_pred CeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCCCCcc
Q 048129 158 KRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVLVTETKDLNE 237 (412)
Q Consensus 158 ~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~~~~~e~l~~ 237 (412)
+.-+|+|+|.|.|.- ...|+.+ | .++|||+. +...++.+.+++. ..|+..+|... ++.++.
T Consensus 37 ~~~~vLdiG~G~G~~----~~~l~~~--~----~~~~~~D~-s~~~~~~a~~~~~----~~~~~~~~~~~---d~~~~~- 97 (246)
T 1y8c_A 37 VFDDYLDLACGTGNL----TENLCPK--F----KNTWAVDL-SQEMLSEAENKFR----SQGLKPRLACQ---DISNLN- 97 (246)
T ss_dssp CTTEEEEETCTTSTT----HHHHGGG--S----SEEEEECS-CHHHHHHHHHHHH----HTTCCCEEECC---CGGGCC-
T ss_pred CCCeEEEeCCCCCHH----HHHHHHC--C----CcEEEEEC-CHHHHHHHHHHHh----hcCCCeEEEec---ccccCC-
Confidence 556899999998873 3455555 2 36999987 5555666655543 34444444332 233322
Q ss_pred ccccCCCCceEEEee-cccc-CCCCchHHHHHHH-HhcCCCEEEEEee
Q 048129 238 DKFDLNAGEAVAVYS-PILL-SRTRHPDFLIKML-RKISPCVMVIIEV 282 (412)
Q Consensus 238 ~~l~~~~~E~laVn~-~~~L-~~~~~~~~~L~~v-r~L~P~vvvl~E~ 282 (412)
+. ..=+.|+.+. .+.- ..+.....+|+.+ +.|+|.-.++++.
T Consensus 98 --~~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 142 (246)
T 1y8c_A 98 --IN-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDI 142 (246)
T ss_dssp --CS-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred --cc-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 11 1124444443 3322 2334456677766 5679988777643
No 72
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=77.91 E-value=14 Score=35.13 Aligned_cols=135 Identities=10% Similarity=0.089 Sum_probs=69.5
Q ss_pred eeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHh-cC-CcEEEEEeecCCCCCCc
Q 048129 159 RIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAET-WN-LPFSFKIVLVTETKDLN 236 (412)
Q Consensus 159 ~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~-lg-v~Fef~~v~~~~~e~l~ 236 (412)
.-+|+|+|.|.|. +...|+.++ | .-+||+|+. +...++.+.+++...... ++ -.+++.. .+..+..
T Consensus 84 ~~~VLdiG~G~G~----~~~~l~~~~---~-~~~V~~VDi-d~~vi~~ar~~~~~~~~~~~~~~rv~~~~---~D~~~~l 151 (294)
T 3adn_A 84 AKHVLIIGGGDGA----MLREVTRHK---N-VESITMVEI-DAGVVSFCRQYLPNHNAGSYDDPRFKLVI---DDGVNFV 151 (294)
T ss_dssp CCEEEEESCTTCH----HHHHHHTCT---T-CCEEEEECS-CTTHHHHHHHHCHHHHSSCTTCTTCCEEC---SCSCC--
T ss_pred CCEEEEEeCChhH----HHHHHHhCC---C-CCEEEEEEC-CHHHHHHHHHhhhhcccccccCCceEEEE---ChHHHHH
Confidence 4589999999885 556666552 2 368999987 445677777766655321 21 1233322 1211111
Q ss_pred cccccCCCCceEEEeeccccCCCCch--HHHHHHH-HhcCCCEEEEEeecCcCCCCchHHHHHHHHHHHHHHHHHhh
Q 048129 237 EDKFDLNAGEAVAVYSPILLSRTRHP--DFLIKML-RKISPCVMVIIEVEANHNSQNFEDRFFEVLFHYSASFDCLK 310 (412)
Q Consensus 237 ~~~l~~~~~E~laVn~~~~L~~~~~~--~~~L~~v-r~L~P~vvvl~E~ea~~n~~~F~~RF~eaL~~YsalFdsLd 310 (412)
.. .-..=++|++++......+..+ ..|++.+ +.|+|.-++++..++....+ +.+.+.+.....+|....
T Consensus 152 ~~--~~~~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~---~~~~~~~~~l~~~F~~v~ 223 (294)
T 3adn_A 152 NQ--TSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQ---EEAIDSHRKLSHYFSDVG 223 (294)
T ss_dssp -C--CCCCEEEEEECC----------CCHHHHHHHHHTEEEEEEEEEEEEECSSCC---HHHHHHHHHHHHHCSEEE
T ss_pred hh--cCCCccEEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecCCcccch---HHHHHHHHHHHHHCCCeE
Confidence 10 0112256777655433212221 4566655 78999998888665433333 344444445555566544
No 73
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=77.87 E-value=21 Score=32.61 Aligned_cols=108 Identities=12% Similarity=0.222 Sum_probs=57.0
Q ss_pred HHHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEe
Q 048129 148 QAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIV 227 (412)
Q Consensus 148 qaIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v 227 (412)
+.+++.+.-...-.|+|+|.|.|.-- ..|+. + ..++|||+. +...++.+.+++ -++. |...
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~~~----~~l~~-~-----~~~v~gvD~-s~~~~~~a~~~~------~~~~--~~~~ 107 (279)
T 3ccf_A 47 EDLLQLLNPQPGEFILDLGCGTGQLT----EKIAQ-S-----GAEVLGTDN-AATMIEKARQNY------PHLH--FDVA 107 (279)
T ss_dssp CHHHHHHCCCTTCEEEEETCTTSHHH----HHHHH-T-----TCEEEEEES-CHHHHHHHHHHC------TTSC--EEEC
T ss_pred HHHHHHhCCCCCCEEEEecCCCCHHH----HHHHh-C-----CCeEEEEEC-CHHHHHHHHhhC------CCCE--EEEC
Confidence 34555555445568999999988643 34444 2 257999987 545555544432 1333 3332
Q ss_pred ecCCCCCCccccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEEeec
Q 048129 228 LVTETKDLNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVIIEVE 283 (412)
Q Consensus 228 ~~~~~e~l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~E~e 283 (412)
+.+++..+ ..=+.|+.+..+.- .++ ...+|+.+ +.|+|.-.+++..-
T Consensus 108 ---d~~~~~~~----~~fD~v~~~~~l~~-~~d-~~~~l~~~~~~LkpgG~l~~~~~ 155 (279)
T 3ccf_A 108 ---DARNFRVD----KPLDAVFSNAMLHW-VKE-PEAAIASIHQALKSGGRFVAEFG 155 (279)
T ss_dssp ---CTTTCCCS----SCEEEEEEESCGGG-CSC-HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ---ChhhCCcC----CCcCEEEEcchhhh-CcC-HHHHHHHHHHhcCCCcEEEEEec
Confidence 23333210 11134444433322 233 34555554 77899877776543
No 74
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=77.72 E-value=5.2 Score=36.59 Aligned_cols=115 Identities=18% Similarity=0.116 Sum_probs=58.6
Q ss_pred HHHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEe
Q 048129 148 QAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIV 227 (412)
Q Consensus 148 qaIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v 227 (412)
+.|++.+.-.+.-+|+|+|.|.|. +...|+. | ..++|||+. +...++ .|+... ..+|..
T Consensus 24 ~~l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~-----~-~~~v~gvD~-s~~~~~--------~a~~~~-~~~~~~- 82 (261)
T 3ege_A 24 NAIINLLNLPKGSVIADIGAGTGG----YSVALAN-----Q-GLFVYAVEP-SIVMRQ--------QAVVHP-QVEWFT- 82 (261)
T ss_dssp HHHHHHHCCCTTCEEEEETCTTSH----HHHHHHT-----T-TCEEEEECS-CHHHHH--------SSCCCT-TEEEEC-
T ss_pred HHHHHHhCCCCCCEEEEEcCcccH----HHHHHHh-----C-CCEEEEEeC-CHHHHH--------HHHhcc-CCEEEE-
Confidence 345555544556789999999886 3344443 2 268999987 333222 233222 444433
Q ss_pred ecCCCCCCccccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCE-EEEEeecCcCCCCch
Q 048129 228 LVTETKDLNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCV-MVIIEVEANHNSQNF 291 (412)
Q Consensus 228 ~~~~~e~l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~v-vvl~E~ea~~n~~~F 291 (412)
.+.+++... -..=+.|+.+..+. .. .....+|+.+ +.|+ .- +++++.+.+.....+
T Consensus 83 --~d~~~~~~~---~~~fD~v~~~~~l~-~~-~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~ 140 (261)
T 3ege_A 83 --GYAENLALP---DKSVDGVISILAIH-HF-SHLEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIW 140 (261)
T ss_dssp --CCTTSCCSC---TTCBSEEEEESCGG-GC-SSHHHHHHHHHHHBC-SSCEEEEEECGGGCCCCG
T ss_pred --CchhhCCCC---CCCEeEEEEcchHh-hc-cCHHHHHHHHHHHhC-CcEEEEEEcCCchhHHHH
Confidence 233333211 11124444443332 12 3344555554 6778 64 677776655544333
No 75
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=77.37 E-value=9.8 Score=32.77 Aligned_cols=104 Identities=13% Similarity=0.124 Sum_probs=54.8
Q ss_pred eEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCC--cEEEEEeecCCCCCCcc
Q 048129 160 IHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNL--PFSFKIVLVTETKDLNE 237 (412)
Q Consensus 160 vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv--~Fef~~v~~~~~e~l~~ 237 (412)
-.|+|+|.|.|. +...|+.+- +| .-++|||+. +...++.+.+++ +..|+ .++|.. .+.+++..
T Consensus 24 ~~vLDlGcG~G~----~~~~l~~~~-~~--~~~v~~vD~-s~~~~~~a~~~~----~~~~~~~~v~~~~---~d~~~~~~ 88 (197)
T 3eey_A 24 DTVVDATCGNGN----DTAFLASLV-GE--NGRVFGFDI-QDKAIANTTKKL----TDLNLIDRVTLIK---DGHQNMDK 88 (197)
T ss_dssp CEEEESCCTTSH----HHHHHHHHH-CT--TCEEEEECS-CHHHHHHHHHHH----HHTTCGGGEEEEC---SCGGGGGG
T ss_pred CEEEEcCCCCCH----HHHHHHHHh-CC--CCEEEEEEC-CHHHHHHHHHHH----HHcCCCCCeEEEE---CCHHHHhh
Confidence 479999999984 334444442 22 248999987 555565555544 44565 344433 23333321
Q ss_pred ccccCCCCceEEEeeccccC--------CCCchHHHHHH-HHhcCCCEEEEEe
Q 048129 238 DKFDLNAGEAVAVYSPILLS--------RTRHPDFLIKM-LRKISPCVMVIIE 281 (412)
Q Consensus 238 ~~l~~~~~E~laVn~~~~L~--------~~~~~~~~L~~-vr~L~P~vvvl~E 281 (412)
... ..=+.|+.|..+ +. .+.....+|+. .+.|+|.-.+++.
T Consensus 89 -~~~-~~fD~v~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~ 138 (197)
T 3eey_A 89 -YID-CPVKAVMFNLGY-LPSGDHSISTRPETTIQALSKAMELLVTGGIITVV 138 (197)
T ss_dssp -TCC-SCEEEEEEEESB-CTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -hcc-CCceEEEEcCCc-ccCcccccccCcccHHHHHHHHHHhCcCCCEEEEE
Confidence 011 122566667655 21 11112335554 4678998666543
No 76
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=77.23 E-value=11 Score=33.48 Aligned_cols=41 Identities=7% Similarity=0.105 Sum_probs=28.6
Q ss_pred eeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHH
Q 048129 159 RIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKR 210 (412)
Q Consensus 159 ~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~r 210 (412)
.-+|+|+|.|.|. +...|+.+ | .++|||+. +...++.+.++
T Consensus 49 ~~~vLDiGcG~G~----~~~~l~~~--~----~~v~~vD~-s~~~~~~a~~~ 89 (226)
T 3m33_A 49 QTRVLEAGCGHGP----DAARFGPQ--A----ARWAAYDF-SPELLKLARAN 89 (226)
T ss_dssp TCEEEEESCTTSH----HHHHHGGG--S----SEEEEEES-CHHHHHHHHHH
T ss_pred CCeEEEeCCCCCH----HHHHHHHc--C----CEEEEEEC-CHHHHHHHHHh
Confidence 4579999999886 55666666 2 37999987 55555555444
No 77
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=76.63 E-value=7.6 Score=34.20 Aligned_cols=105 Identities=14% Similarity=0.118 Sum_probs=59.5
Q ss_pred eEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCC-cEEEEEeecCCCCCCccc
Q 048129 160 IHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNL-PFSFKIVLVTETKDLNED 238 (412)
Q Consensus 160 vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv-~Fef~~v~~~~~e~l~~~ 238 (412)
-+|+|+|.|.|.--.. ++.+ |. -++|+|+. +...++.+.+++ +..|+ ..+|.. .+..+..+.
T Consensus 56 ~~vLDlgcG~G~~~~~----l~~~--~~---~~V~~vD~-s~~~l~~a~~~~----~~~~~~~v~~~~---~D~~~~~~~ 118 (202)
T 2fpo_A 56 AQCLDCFAGSGALGLE----ALSR--YA---AGATLIEM-DRAVSQQLIKNL----ATLKAGNARVVN---SNAMSFLAQ 118 (202)
T ss_dssp CEEEETTCTTCHHHHH----HHHT--TC---SEEEEECS-CHHHHHHHHHHH----HHTTCCSEEEEC---SCHHHHHSS
T ss_pred CeEEEeCCCcCHHHHH----HHhc--CC---CEEEEEEC-CHHHHHHHHHHH----HHcCCCcEEEEE---CCHHHHHhh
Confidence 4799999998863322 2333 22 27999987 555566555444 44555 344432 222221110
Q ss_pred cccCCCCceEEEeeccccCCCCchHHHHHHHHh---cCCCEEEEEeecCcC
Q 048129 239 KFDLNAGEAVAVYSPILLSRTRHPDFLIKMLRK---ISPCVMVIIEVEANH 286 (412)
Q Consensus 239 ~l~~~~~E~laVn~~~~L~~~~~~~~~L~~vr~---L~P~vvvl~E~ea~~ 286 (412)
.-..=+.|++|.++. ....+.+++.+++ |+|.-+++++.....
T Consensus 119 --~~~~fD~V~~~~p~~---~~~~~~~l~~l~~~~~L~pgG~l~i~~~~~~ 164 (202)
T 2fpo_A 119 --KGTPHNIVFVDPPFR---RGLLEETINLLEDNGWLADEALIYVESEVEN 164 (202)
T ss_dssp --CCCCEEEEEECCSSS---TTTHHHHHHHHHHTTCEEEEEEEEEEEEGGG
T ss_pred --cCCCCCEEEECCCCC---CCcHHHHHHHHHhcCccCCCcEEEEEECCCc
Confidence 001124666666654 2445678888876 999988887765543
No 78
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=76.49 E-value=11 Score=33.42 Aligned_cols=110 Identities=10% Similarity=0.023 Sum_probs=57.1
Q ss_pred CeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc--EEEEEeecCCCCCC
Q 048129 158 KRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP--FSFKIVLVTETKDL 235 (412)
Q Consensus 158 ~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~--Fef~~v~~~~~e~l 235 (412)
+.-+|+|+|.|.|.-= ..||.+- || .-++|+|+. +...++.+.+++ +..|+. ++|..- +..+.
T Consensus 58 ~~~~vLdiG~G~G~~~----~~la~~~--~~-~~~v~~vD~-~~~~~~~a~~~~----~~~~~~~~v~~~~~---d~~~~ 122 (221)
T 3u81_A 58 SPSLVLELGAYCGYSA----VRMARLL--QP-GARLLTMEI-NPDCAAITQQML----NFAGLQDKVTILNG---ASQDL 122 (221)
T ss_dssp CCSEEEEECCTTSHHH----HHHHTTS--CT-TCEEEEEES-CHHHHHHHHHHH----HHHTCGGGEEEEES---CHHHH
T ss_pred CCCEEEEECCCCCHHH----HHHHHhC--CC-CCEEEEEeC-ChHHHHHHHHHH----HHcCCCCceEEEEC---CHHHH
Confidence 4458999999988532 2344331 22 368999987 445555554443 344554 555432 22111
Q ss_pred cccc---ccCCCCceEEEeeccccCCCCchHHHHHHHHhcCCCEEEEEeecC
Q 048129 236 NEDK---FDLNAGEAVAVYSPILLSRTRHPDFLIKMLRKISPCVMVIIEVEA 284 (412)
Q Consensus 236 ~~~~---l~~~~~E~laVn~~~~L~~~~~~~~~L~~vr~L~P~vvvl~E~ea 284 (412)
-+.. ....+=+.|+++..... -.+...++..++.|+|.-+++++.-.
T Consensus 123 l~~~~~~~~~~~fD~V~~d~~~~~--~~~~~~~~~~~~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 123 IPQLKKKYDVDTLDMVFLDHWKDR--YLPDTLLLEKCGLLRKGTVLLADNVI 172 (221)
T ss_dssp GGGTTTTSCCCCCSEEEECSCGGG--HHHHHHHHHHTTCCCTTCEEEESCCC
T ss_pred HHHHHHhcCCCceEEEEEcCCccc--chHHHHHHHhccccCCCeEEEEeCCC
Confidence 1110 00112246666543321 01122455555889999998886444
No 79
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=76.48 E-value=18 Score=34.79 Aligned_cols=111 Identities=12% Similarity=0.042 Sum_probs=64.2
Q ss_pred HHHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCC--cEEEE
Q 048129 148 QAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNL--PFSFK 225 (412)
Q Consensus 148 qaIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv--~Fef~ 225 (412)
++|.+.+.-.+.-.|+|+|.|.|. +...++.+ | .-++|||+.. . .++.+.+++ +..|+ ..+|.
T Consensus 54 ~~i~~~~~~~~~~~VLDiGcGtG~----ls~~la~~--g---~~~v~gvD~s-~-~~~~a~~~~----~~~~~~~~i~~~ 118 (340)
T 2fyt_A 54 DFIYQNPHIFKDKVVLDVGCGTGI----LSMFAAKA--G---AKKVLGVDQS-E-ILYQAMDII----RLNKLEDTITLI 118 (340)
T ss_dssp HHHHHCGGGTTTCEEEEETCTTSH----HHHHHHHT--T---CSEEEEEESS-T-HHHHHHHHH----HHTTCTTTEEEE
T ss_pred HHHHhhhhhcCCCEEEEeeccCcH----HHHHHHHc--C---CCEEEEEChH-H-HHHHHHHHH----HHcCCCCcEEEE
Confidence 556665544455589999999884 44556655 2 2589999974 3 455444443 34454 34443
Q ss_pred EeecCCCCCCccccccCCCCceEEEee-ccccCCCCchHHHHHHH-HhcCCCEEEE
Q 048129 226 IVLVTETKDLNEDKFDLNAGEAVAVYS-PILLSRTRHPDFLIKML-RKISPCVMVI 279 (412)
Q Consensus 226 ~v~~~~~e~l~~~~l~~~~~E~laVn~-~~~L~~~~~~~~~L~~v-r~L~P~vvvl 279 (412)
. .+.+++... ...=+.|+.|. .+.+......+.+|+.+ +-|+|.-.++
T Consensus 119 ~---~d~~~~~~~---~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 119 K---GKIEEVHLP---VEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp E---SCTTTSCCS---CSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred E---eeHHHhcCC---CCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 3 334443211 11124555554 33445556677788876 7799998777
No 80
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=76.31 E-value=33 Score=31.52 Aligned_cols=114 Identities=10% Similarity=0.077 Sum_probs=60.0
Q ss_pred HHHHhhh----hcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc--
Q 048129 148 QAIIERV----ASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP-- 221 (412)
Q Consensus 148 qaIleA~----~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~-- 221 (412)
..|++.+ .-...-+|+|+|.|.|..-..| +.+.+ .++|||+. +...++.+.+++. ..|++
T Consensus 68 ~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l----~~~~~-----~~v~gvD~-s~~~~~~a~~~~~----~~~~~~~ 133 (297)
T 2o57_A 68 EWLASELAMTGVLQRQAKGLDLGAGYGGAARFL----VRKFG-----VSIDCLNI-APVQNKRNEEYNN----QAGLADN 133 (297)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHH----HHHHC-----CEEEEEES-CHHHHHHHHHHHH----HHTCTTT
T ss_pred HHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHH----HHHhC-----CEEEEEeC-CHHHHHHHHHHHH----hcCCCcc
Confidence 3445555 3245568999999988654444 43321 37999987 5555655555443 34443
Q ss_pred EEEEEeecCCCCCCccccccCCCCceEEEeecccc-CCCCchHHHHHHH-HhcCCCEEEEE-eecC
Q 048129 222 FSFKIVLVTETKDLNEDKFDLNAGEAVAVYSPILL-SRTRHPDFLIKML-RKISPCVMVII-EVEA 284 (412)
Q Consensus 222 Fef~~v~~~~~e~l~~~~l~~~~~E~laVn~~~~L-~~~~~~~~~L~~v-r~L~P~vvvl~-E~ea 284 (412)
++|... +..++. ..++..=+|-+...+ ..++ ...+|+.+ |.|+|.-.+++ +...
T Consensus 134 ~~~~~~---d~~~~~-----~~~~~fD~v~~~~~l~~~~~-~~~~l~~~~~~LkpgG~l~~~~~~~ 190 (297)
T 2o57_A 134 ITVKYG---SFLEIP-----CEDNSYDFIWSQDAFLHSPD-KLKVFQECARVLKPRGVMAITDPMK 190 (297)
T ss_dssp EEEEEC---CTTSCS-----SCTTCEEEEEEESCGGGCSC-HHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred eEEEEc---CcccCC-----CCCCCEeEEEecchhhhcCC-HHHHHHHHHHHcCCCeEEEEEEecc
Confidence 555443 333332 222322223333333 2233 45566655 67899865554 4433
No 81
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=76.10 E-value=32 Score=32.88 Aligned_cols=99 Identities=12% Similarity=0.064 Sum_probs=52.1
Q ss_pred CeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCCCCcc
Q 048129 158 KRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVLVTETKDLNE 237 (412)
Q Consensus 158 ~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~~~~~e~l~~ 237 (412)
+.-+|+|+|.|.|. +...|+.+. | .+++|+++. + ..++ .|+... ..+|..- +..+ .
T Consensus 188 ~~~~vlDvG~G~G~----~~~~l~~~~---p-~~~~~~~D~-~-~~~~--------~a~~~~-~v~~~~~---d~~~-~- 243 (352)
T 1fp2_A 188 GLESIVDVGGGTGT----TAKIICETF---P-KLKCIVFDR-P-QVVE--------NLSGSN-NLTYVGG---DMFT-S- 243 (352)
T ss_dssp TCSEEEEETCTTSH----HHHHHHHHC---T-TCEEEEEEC-H-HHHT--------TCCCBT-TEEEEEC---CTTT-C-
T ss_pred cCceEEEeCCCccH----HHHHHHHHC---C-CCeEEEeeC-H-HHHh--------hcccCC-CcEEEec---cccC-C-
Confidence 44689999999994 556666553 2 378999986 2 2232 223221 1444433 2211 1
Q ss_pred ccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCC---C-EEEEEeecC
Q 048129 238 DKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISP---C-VMVIIEVEA 284 (412)
Q Consensus 238 ~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P---~-vvvl~E~ea 284 (412)
+. .-++++.+..++--.......+|+.+ +.|+| . .++++|...
T Consensus 244 --~p--~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~ 291 (352)
T 1fp2_A 244 --IP--NADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVI 291 (352)
T ss_dssp --CC--CCSEEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEE
T ss_pred --CC--CccEEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeec
Confidence 11 13555555544422212223667766 66899 3 455566543
No 82
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=75.89 E-value=32 Score=32.94 Aligned_cols=108 Identities=14% Similarity=0.079 Sum_probs=57.3
Q ss_pred HHHhhh--hcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEE
Q 048129 149 AIIERV--ASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKI 226 (412)
Q Consensus 149 aIleA~--~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~ 226 (412)
.|++.+ .=...-+|+|+|.|.|. +...|+.+. | .+++|+++. + ..++ .|+.+. ..+|..
T Consensus 182 ~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p-~~~~~~~D~-~-~~~~--------~a~~~~-~v~~~~ 242 (358)
T 1zg3_A 182 LVLQENKRVFEGLESLVDVGGGTGG----VTKLIHEIF---P-HLKCTVFDQ-P-QVVG--------NLTGNE-NLNFVG 242 (358)
T ss_dssp HHHHHTHHHHHTCSEEEEETCTTSH----HHHHHHHHC---T-TSEEEEEEC-H-HHHS--------SCCCCS-SEEEEE
T ss_pred HHHHhcchhccCCCEEEEECCCcCH----HHHHHHHHC---C-CCeEEEecc-H-HHHh--------hcccCC-CcEEEe
Confidence 466665 21234689999999885 455566553 3 478999986 2 3232 222221 244443
Q ss_pred eecCCCCCCccccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCC---C-EEEEEeecC
Q 048129 227 VLVTETKDLNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISP---C-VMVIIEVEA 284 (412)
Q Consensus 227 v~~~~~e~l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P---~-vvvl~E~ea 284 (412)
- +..+ . + ..-++++.+..++--.......+|+.+ +.|+| . .++++|.-.
T Consensus 243 ~---d~~~-~---~--~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~ 296 (358)
T 1zg3_A 243 G---DMFK-S---I--PSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISI 296 (358)
T ss_dssp C---CTTT-C---C--CCCSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEE
T ss_pred C---ccCC-C---C--CCceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEecc
Confidence 2 2222 1 1 124666666555432222233677766 66899 4 455556543
No 83
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=75.48 E-value=19 Score=34.43 Aligned_cols=113 Identities=13% Similarity=0.086 Sum_probs=62.8
Q ss_pred HHHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc--EEEE
Q 048129 148 QAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP--FSFK 225 (412)
Q Consensus 148 qaIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~--Fef~ 225 (412)
++|++...-.+.-+|+|+|.|.|. +...++.+ | .-+++||+.. ..++.+.++ ++..|++ .+|
T Consensus 28 ~ai~~~~~~~~~~~VLDiGcGtG~----ls~~la~~--g---~~~v~~vD~s--~~~~~a~~~----~~~~~~~~~i~~- 91 (328)
T 1g6q_1 28 NAIIQNKDLFKDKIVLDVGCGTGI----LSMFAAKH--G---AKHVIGVDMS--SIIEMAKEL----VELNGFSDKITL- 91 (328)
T ss_dssp HHHHHHHHHHTTCEEEEETCTTSH----HHHHHHHT--C---CSEEEEEESS--THHHHHHHH----HHHTTCTTTEEE-
T ss_pred HHHHhhHhhcCCCEEEEecCccHH----HHHHHHHC--C---CCEEEEEChH--HHHHHHHHH----HHHcCCCCCEEE-
Confidence 345444433344589999999985 34455555 2 2489999973 344444333 3445554 444
Q ss_pred EeecCCCCCCccccccCCCCceEEEeec-cccCCCCchHHHHHHH-HhcCCCEEEEEe
Q 048129 226 IVLVTETKDLNEDKFDLNAGEAVAVYSP-ILLSRTRHPDFLIKML-RKISPCVMVIIE 281 (412)
Q Consensus 226 ~v~~~~~e~l~~~~l~~~~~E~laVn~~-~~L~~~~~~~~~L~~v-r~L~P~vvvl~E 281 (412)
+. .+.+++... ...=+.|+.+.+ ..+......+.+|+.+ +-|+|.-.++.+
T Consensus 92 -~~-~d~~~~~~~---~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~~ 144 (328)
T 1g6q_1 92 -LR-GKLEDVHLP---FPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFPD 144 (328)
T ss_dssp -EE-SCTTTSCCS---SSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred -EE-CchhhccCC---CCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEEe
Confidence 32 334443211 111245555543 2344555667788776 788999887743
No 84
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=75.29 E-value=14 Score=35.17 Aligned_cols=142 Identities=11% Similarity=0.096 Sum_probs=73.6
Q ss_pred HHHHHHhcCchhhHHHHHhhHHHHhhh----hcCCe-eEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChH
Q 048129 128 ALVACYKESSFYQATLFAGTQAIIERV----ASAKR-IHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQ 202 (412)
Q Consensus 128 a~~~~~~~sP~~~fa~~taNqaIleA~----~g~~~-vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~ 202 (412)
+-..+.+..|-.. ...-+|.+.+.-+ .++.. =+|+|+|.|-|.. ..+..++.+. . |. -|||+|+. +..
T Consensus 44 ~~~~~~~~~P~~~-~~a~~nr~fl~rav~~l~~~~g~~q~LDLGcG~pT~--~~~~~la~~~-~-P~-arVv~VD~-sp~ 116 (277)
T 3giw_A 44 AGDAMSREWPALP-VHMRANRDWMNRAVAHLAKEAGIRQFLDIGTGIPTS--PNLHEIAQSV-A-PE-SRVVYVDN-DPI 116 (277)
T ss_dssp HHHHHHHHCTTHH-HHHHHHHHHHHHHHHHHHHTSCCCEEEEESCCSCCS--SCHHHHHHHH-C-TT-CEEEEEEC-CHH
T ss_pred HHHHHHHhCCCHH-HHHHHHHHHHHHHHHHhccccCCCEEEEeCCCCCcc--cHHHHHHHHH-C-CC-CEEEEEeC-ChH
Confidence 4455667788874 3345788777643 33333 3799999997542 2223333332 1 33 79999987 555
Q ss_pred HHHHHHHHHHHHHHhcCCcEEEEEeecCCCCC-Cc----cccccCCCCc--eEEEeecccc-CCCCchHHHHH-HHHhcC
Q 048129 203 RMEETGKRLAYFAETWNLPFSFKIVLVTETKD-LN----EDKFDLNAGE--AVAVYSPILL-SRTRHPDFLIK-MLRKIS 273 (412)
Q Consensus 203 ~l~~tg~rL~~fA~~lgv~Fef~~v~~~~~e~-l~----~~~l~~~~~E--~laVn~~~~L-~~~~~~~~~L~-~vr~L~ 273 (412)
.|+.+..+|.+. -.-..+|....+..++. +. ...+ ..++ +|+.|..++. ........+|+ ..+.|+
T Consensus 117 mLa~Ar~~l~~~---~~~~~~~v~aD~~~~~~~l~~~~~~~~~--D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~ 191 (277)
T 3giw_A 117 VLTLSQGLLAST---PEGRTAYVEADMLDPASILDAPELRDTL--DLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLP 191 (277)
T ss_dssp HHHTTHHHHCCC---SSSEEEEEECCTTCHHHHHTCHHHHTTC--CTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSC
T ss_pred HHHHHHHHhccC---CCCcEEEEEecccChhhhhccccccccc--CcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCC
Confidence 566665555321 11235555543222211 00 1122 2233 4555666654 22222244564 557789
Q ss_pred CCEEEEEe
Q 048129 274 PCVMVIIE 281 (412)
Q Consensus 274 P~vvvl~E 281 (412)
|--..++.
T Consensus 192 PGG~Lvls 199 (277)
T 3giw_A 192 SGSYLAMS 199 (277)
T ss_dssp TTCEEEEE
T ss_pred CCcEEEEE
Confidence 98655543
No 85
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=74.48 E-value=4.8 Score=36.68 Aligned_cols=102 Identities=8% Similarity=0.016 Sum_probs=61.2
Q ss_pred eEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCCCCcccc
Q 048129 160 IHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVLVTETKDLNEDK 239 (412)
Q Consensus 160 vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~~~~~e~l~~~~ 239 (412)
=+|+|+|.|. -+|--.++... | ..+++++|- +...++-+.++ |+..|+...+.... -.+ .
T Consensus 51 ~~VLDlGCG~----GplAl~l~~~~---p-~a~~~A~Di-~~~~leiar~~----~~~~g~~~~v~~~d--~~~----~- 110 (200)
T 3fzg_A 51 SSILDFGCGF----NPLALYQWNEN---E-KIIYHAYDI-DRAEIAFLSSI----IGKLKTTIKYRFLN--KES----D- 110 (200)
T ss_dssp SEEEEETCTT----HHHHHHHHCSS---C-CCEEEEECS-CHHHHHHHHHH----HHHSCCSSEEEEEC--CHH----H-
T ss_pred CeEEEecCCC----CHHHHHHHhcC---C-CCEEEEEeC-CHHHHHHHHHH----HHhcCCCccEEEec--ccc----c-
Confidence 3789998874 45655665553 3 369999987 55555555444 56778875554432 111 1
Q ss_pred ccCCCCceEEEeeccccCCCCchHHHHHHHHhcCCCEEEEEee
Q 048129 240 FDLNAGEAVAVYSPILLSRTRHPDFLIKMLRKISPCVMVIIEV 282 (412)
Q Consensus 240 l~~~~~E~laVn~~~~L~~~~~~~~~L~~vr~L~P~vvvl~E~ 282 (412)
..-.+-++|..+-.+++- ........+.++.|+|..+++.=+
T Consensus 111 ~~~~~~DvVLa~k~LHlL-~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 111 VYKGTYDVVFLLKMLPVL-KQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp HTTSEEEEEEEETCHHHH-HHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred CCCCCcChhhHhhHHHhh-hhhHHHHHHHHHHhCCCCEEEEeC
Confidence 111222566666666662 222223558889999999998755
No 86
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=74.34 E-value=53 Score=30.11 Aligned_cols=103 Identities=15% Similarity=0.160 Sum_probs=56.4
Q ss_pred CCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCCCCc
Q 048129 157 AKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVLVTETKDLN 236 (412)
Q Consensus 157 ~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~~~~~e~l~ 236 (412)
.+.-.|+|+|.|.|. +...|+.+- |+ ..++|||+. +...++.+.++ ++..+...+|..- +..++.
T Consensus 21 ~~~~~vLDiGcG~G~----~~~~l~~~~--~~-~~~v~gvD~-s~~~~~~a~~~----~~~~~~~v~~~~~---d~~~~~ 85 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGY----LGLVLMPLL--PE-GSKYTGIDS-GETLLAEAREL----FRLLPYDSEFLEG---DATEIE 85 (284)
T ss_dssp CSCCEEEEETCTTTH----HHHHHTTTS--CT-TCEEEEEES-CHHHHHHHHHH----HHSSSSEEEEEES---CTTTCC
T ss_pred CCCCeEEEecCCCCH----HHHHHHHhC--CC-CCEEEEEEC-CHHHHHHHHHH----HHhcCCceEEEEc---chhhcC
Confidence 456789999999883 445566553 32 268999987 44445444433 3445555555443 333332
Q ss_pred cccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEE
Q 048129 237 EDKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVII 280 (412)
Q Consensus 237 ~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~ 280 (412)
.+ ..=+.|+.+..+. ..++. +.+|+.+ +.|+|.-.+++
T Consensus 86 ~~----~~fD~v~~~~~l~-~~~~~-~~~l~~~~~~LkpgG~l~~ 124 (284)
T 3gu3_A 86 LN----DKYDIAICHAFLL-HMTTP-ETMLQKMIHSVKKGGKIIC 124 (284)
T ss_dssp CS----SCEEEEEEESCGG-GCSSH-HHHHHHHHHTEEEEEEEEE
T ss_pred cC----CCeeEEEECChhh-cCCCH-HHHHHHHHHHcCCCCEEEE
Confidence 11 1113444433322 22333 4555554 77899877665
No 87
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=74.28 E-value=47 Score=30.88 Aligned_cols=111 Identities=13% Similarity=0.186 Sum_probs=59.2
Q ss_pred CeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHh----cCCcEEEEEeecCCCC
Q 048129 158 KRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAET----WNLPFSFKIVLVTETK 233 (412)
Q Consensus 158 ~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~----lgv~Fef~~v~~~~~e 233 (412)
+.-+|+|+|.|.|.- ...|+.++ .-++|||+. +...++.+.++....... .....+|... +.+
T Consensus 34 ~~~~VLDlGcG~G~~----~~~l~~~~-----~~~v~gvD~-s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~---D~~ 100 (313)
T 3bgv_A 34 RDITVLDLGCGKGGD----LLKWKKGR-----INKLVCTDI-ADVSVKQCQQRYEDMKNRRDSEYIFSAEFITA---DSS 100 (313)
T ss_dssp -CCEEEEETCTTTTT----HHHHHHTT-----CSEEEEEES-CHHHHHHHHHHHHHHHSSSCC-CCCEEEEEEC---CTT
T ss_pred CCCEEEEECCCCcHH----HHHHHhcC-----CCEEEEEeC-CHHHHHHHHHHHHHhhhcccccccceEEEEEe---ccc
Confidence 567899999998873 34444432 257999987 556677777666543211 1123444332 333
Q ss_pred CCcc-ccccCCCC--ceEEEeecccc--CCCCchHHHHHHH-HhcCCCEEEEEe
Q 048129 234 DLNE-DKFDLNAG--EAVAVYSPILL--SRTRHPDFLIKML-RKISPCVMVIIE 281 (412)
Q Consensus 234 ~l~~-~~l~~~~~--E~laVn~~~~L--~~~~~~~~~L~~v-r~L~P~vvvl~E 281 (412)
++.. +.+.-.++ +.|+.+..++- ........+|+.+ +.|+|.-++++.
T Consensus 101 ~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (313)
T 3bgv_A 101 KELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGT 154 (313)
T ss_dssp TSCSTTTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred ccchhhhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEe
Confidence 3321 01111111 44444443332 2333445677776 678998777764
No 88
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=74.20 E-value=18 Score=34.95 Aligned_cols=108 Identities=17% Similarity=0.122 Sum_probs=56.0
Q ss_pred HHHHhhhh-cCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEE
Q 048129 148 QAIIERVA-SAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKI 226 (412)
Q Consensus 148 qaIleA~~-g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~ 226 (412)
..|++.+. -.+.-+|+|+|.|.|. +...|+.+. | .+++|+++. + ..++ .|+... ..+|..
T Consensus 198 ~~l~~~~~~~~~~~~vLDvG~G~G~----~~~~l~~~~--~--~~~~~~~D~-~-~~~~--------~a~~~~-~v~~~~ 258 (372)
T 1fp1_D 198 KRMLEIYTGFEGISTLVDVGGGSGR----NLELIISKY--P--LIKGINFDL-P-QVIE--------NAPPLS-GIEHVG 258 (372)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSH----HHHHHHHHC--T--TCEEEEEEC-H-HHHT--------TCCCCT-TEEEEE
T ss_pred HHHHHHhhccCCCCEEEEeCCCCcH----HHHHHHHHC--C--CCeEEEeCh-H-HHHH--------hhhhcC-CCEEEe
Confidence 45666654 2345789999999885 455566553 3 478999985 2 2232 222221 244443
Q ss_pred eecCCCCCCccccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEE-Eeec
Q 048129 227 VLVTETKDLNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVI-IEVE 283 (412)
Q Consensus 227 v~~~~~e~l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl-~E~e 283 (412)
- +..+ . + ...++++.+..++--.......+|+.+ +.|+|.-.++ +|..
T Consensus 259 ~---d~~~-~---~--~~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~ 308 (372)
T 1fp1_D 259 G---DMFA-S---V--PQGDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFI 308 (372)
T ss_dssp C---CTTT-C---C--CCEEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred C---Cccc-C---C--CCCCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 2 2222 1 1 113455554444322222223667766 6689976555 4543
No 89
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=74.05 E-value=5.5 Score=40.80 Aligned_cols=113 Identities=15% Similarity=0.123 Sum_probs=63.9
Q ss_pred HHHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc--EEEE
Q 048129 148 QAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP--FSFK 225 (412)
Q Consensus 148 qaIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~--Fef~ 225 (412)
.+|++.+...+.-+|+|+|.|.|. +...|+.++ ..++|||+. +. .++.+ .+.++..|+. .+|.
T Consensus 148 ~~il~~l~~~~~~~VLDiGcGtG~----la~~la~~~-----~~~V~gvD~-s~-~l~~A----~~~~~~~gl~~~v~~~ 212 (480)
T 3b3j_A 148 RAILQNHTDFKDKIVLDVGCGSGI----LSFFAAQAG-----ARKIYAVEA-ST-MAQHA----EVLVKSNNLTDRIVVI 212 (480)
T ss_dssp HHHHHTGGGTTTCEEEEESCSTTH----HHHHHHHTT-----CSEEEEEEC-HH-HHHHH----HHHHHHTTCTTTEEEE
T ss_pred HHHHHhhhhcCCCEEEEecCcccH----HHHHHHHcC-----CCEEEEEEc-HH-HHHHH----HHHHHHcCCCCcEEEE
Confidence 466776655555699999999885 445666642 268999986 32 33333 3344555663 4544
Q ss_pred EeecCCCCCCccccccCCCCceEEEeecccc-CCCCchHHHHHHHHhcCCCEEEEEee
Q 048129 226 IVLVTETKDLNEDKFDLNAGEAVAVYSPILL-SRTRHPDFLIKMLRKISPCVMVIIEV 282 (412)
Q Consensus 226 ~v~~~~~e~l~~~~l~~~~~E~laVn~~~~L-~~~~~~~~~L~~vr~L~P~vvvl~E~ 282 (412)
. .+++++... ..=+.|+.|.++.. ......+.+...-+.|+|.-.++.+.
T Consensus 213 ~---~d~~~~~~~----~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 213 P---GKVEEVSLP----EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp E---SCTTTCCCS----SCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESCE
T ss_pred E---CchhhCccC----CCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 3 334443211 11245555544322 33333445555557899998888554
No 90
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=73.53 E-value=5.9 Score=38.20 Aligned_cols=113 Identities=10% Similarity=0.125 Sum_probs=61.2
Q ss_pred eeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhc-CCcEEEEEeecCCCCCCcc
Q 048129 159 RIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETW-NLPFSFKIVLVTETKDLNE 237 (412)
Q Consensus 159 ~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~l-gv~Fef~~v~~~~~e~l~~ 237 (412)
.-+|+|+|.|.|. +...++.++ | ..++|+|+. +...++.+.+++.+.+..+ +-.++|.. .+..+..+
T Consensus 117 ~~~VLdiG~G~G~----~~~~l~~~~---~-~~~v~~vDi-s~~~l~~ar~~~~~~~~~~~~~~v~~~~---~D~~~~l~ 184 (321)
T 2pt6_A 117 PKNVLVVGGGDGG----IIRELCKYK---S-VENIDICEI-DETVIEVSKIYFKNISCGYEDKRVNVFI---EDASKFLE 184 (321)
T ss_dssp CCEEEEEECTTCH----HHHHHTTCT---T-CCEEEEEES-CHHHHHHHHHHCTTTSGGGGSTTEEEEE---SCHHHHHH
T ss_pred CCEEEEEcCCccH----HHHHHHHcC---C-CCEEEEEEC-CHHHHHHHHHHHHhhccccCCCcEEEEE---ccHHHHHh
Confidence 3589999999885 455666553 3 378999987 5566666666554332222 12244432 22211100
Q ss_pred ccccCCCCceEEEeeccccCCCCch--HHHHHHH-HhcCCCEEEEEeecCc
Q 048129 238 DKFDLNAGEAVAVYSPILLSRTRHP--DFLIKML-RKISPCVMVIIEVEAN 285 (412)
Q Consensus 238 ~~l~~~~~E~laVn~~~~L~~~~~~--~~~L~~v-r~L~P~vvvl~E~ea~ 285 (412)
. . -..=+.|++|.......+... ..+++.+ +.|+|.-+++++.+..
T Consensus 185 ~-~-~~~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 233 (321)
T 2pt6_A 185 N-V-TNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESL 233 (321)
T ss_dssp H-C-CSCEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCT
T ss_pred h-c-CCCceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCc
Confidence 0 0 012257777753222111111 4667665 6789999999876543
No 91
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=73.51 E-value=13 Score=35.17 Aligned_cols=112 Identities=9% Similarity=0.075 Sum_probs=60.6
Q ss_pred eeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcC-CcEEEEEeecCCCCCCcc
Q 048129 159 RIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWN-LPFSFKIVLVTETKDLNE 237 (412)
Q Consensus 159 ~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lg-v~Fef~~v~~~~~e~l~~ 237 (412)
.-.|+|+|.|.|. +...|+.++ | .-+||+|+. +...++.+.+++.+.+..++ -.++|..- +..++..
T Consensus 96 ~~~VLdiG~G~G~----~~~~l~~~~---~-~~~v~~vDi-d~~~i~~a~~~~~~~~~~~~~~~v~~~~~---D~~~~~~ 163 (304)
T 3bwc_A 96 PERVLIIGGGDGG----VLREVLRHG---T-VEHCDLVDI-DGEVMEQSKQHFPQISRSLADPRATVRVG---DGLAFVR 163 (304)
T ss_dssp CCEEEEEECTTSH----HHHHHHTCT---T-CCEEEEEES-CHHHHHHHHHHCHHHHGGGGCTTEEEEES---CHHHHHH
T ss_pred CCeEEEEcCCCCH----HHHHHHhCC---C-CCEEEEEEC-CHHHHHHHHHHhHHhhcccCCCcEEEEEC---cHHHHHH
Confidence 4579999999885 455666552 2 368999987 55667777777665544432 23444332 2221111
Q ss_pred ccccCCCCceEEEeeccccCCCCch--HHHHHHH-HhcCCCEEEEEeec
Q 048129 238 DKFDLNAGEAVAVYSPILLSRTRHP--DFLIKML-RKISPCVMVIIEVE 283 (412)
Q Consensus 238 ~~l~~~~~E~laVn~~~~L~~~~~~--~~~L~~v-r~L~P~vvvl~E~e 283 (412)
. ..-..=+.|++|+.........+ ..+++.+ +.|+|.-++++..+
T Consensus 164 ~-~~~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 211 (304)
T 3bwc_A 164 Q-TPDNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGE 211 (304)
T ss_dssp S-SCTTCEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred h-ccCCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 0 00111256777655433111111 4566665 78999988887644
No 92
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=73.40 E-value=6.4 Score=37.14 Aligned_cols=100 Identities=14% Similarity=0.163 Sum_probs=61.9
Q ss_pred eeEEEecccCCcc-chHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCCCCcc
Q 048129 159 RIHLIDLAIRSGS-HCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVLVTETKDLNE 237 (412)
Q Consensus 159 ~vHIID~~i~~G~-QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~~~~~e~l~~ 237 (412)
--.|+|+|.|.|. -+|. + | ..+++|+|- +.. +.+.+.+++...|+++.|...... .
T Consensus 106 p~~VLDlGCG~gpLal~~-------~----~-~~~y~a~DI-d~~----~i~~ar~~~~~~g~~~~~~v~D~~--~---- 162 (253)
T 3frh_A 106 PRRVLDIACGLNPLALYE-------R----G-IASVWGCDI-HQG----LGDVITPFAREKDWDFTFALQDVL--C---- 162 (253)
T ss_dssp CSEEEEETCTTTHHHHHH-------T----T-CSEEEEEES-BHH----HHHHHHHHHHHTTCEEEEEECCTT--T----
T ss_pred CCeEEEecCCccHHHHHh-------c----c-CCeEEEEeC-CHH----HHHHHHHHHHhcCCCceEEEeecc--c----
Confidence 4489999998772 2221 1 2 378999986 333 445555667778999988876421 1
Q ss_pred ccccCCCCceEEEeeccccCCCCchHHHHHHHHhcCCCEEEEEee
Q 048129 238 DKFDLNAGEAVAVYSPILLSRTRHPDFLIKMLRKISPCVMVIIEV 282 (412)
Q Consensus 238 ~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~vr~L~P~vvvl~E~ 282 (412)
..+ -.+.+++.++-...+-........++.+.+|+|..|++.=+
T Consensus 163 ~~~-~~~~DvvLllk~lh~LE~q~~~~~~~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 163 APP-AEAGDLALIFKLLPLLEREQAGSAMALLQSLNTPRMAVSFP 206 (253)
T ss_dssp SCC-CCBCSEEEEESCHHHHHHHSTTHHHHHHHHCBCSEEEEEEE
T ss_pred CCC-CCCcchHHHHHHHHHhhhhchhhHHHHHHHhcCCCEEEEcC
Confidence 111 12456777776666611111113458888999999988755
No 93
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=73.26 E-value=24 Score=29.32 Aligned_cols=50 Identities=12% Similarity=0.175 Sum_probs=33.1
Q ss_pred HHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHH
Q 048129 150 IIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKR 210 (412)
Q Consensus 150 IleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~r 210 (412)
+++.+.-.+.-.|+|+|.|.|. +...|+.+. . ++|||+. +...++.+.++
T Consensus 9 ~~~~~~~~~~~~vLDiG~G~G~----~~~~l~~~~-----~-~v~~vD~-s~~~~~~a~~~ 58 (170)
T 3i9f_A 9 YLPNIFEGKKGVIVDYGCGNGF----YCKYLLEFA-----T-KLYCIDI-NVIALKEVKEK 58 (170)
T ss_dssp THHHHHSSCCEEEEEETCTTCT----THHHHHTTE-----E-EEEEECS-CHHHHHHHHHH
T ss_pred HHHhcCcCCCCeEEEECCCCCH----HHHHHHhhc-----C-eEEEEeC-CHHHHHHHHHh
Confidence 4455555567789999999886 345565553 2 8999987 44555555444
No 94
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=73.16 E-value=31 Score=30.30 Aligned_cols=104 Identities=18% Similarity=0.178 Sum_probs=59.9
Q ss_pred HHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc--EEEEE
Q 048129 149 AIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP--FSFKI 226 (412)
Q Consensus 149 aIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~--Fef~~ 226 (412)
.+++.+.-...-.|+|+|.|.|. +...|+.+ + -++|||+. +...++.+.++ ++..|++ ++|..
T Consensus 46 ~~l~~l~~~~~~~vLDlGcG~G~----~~~~la~~--~----~~v~~vD~-s~~~~~~a~~~----~~~~g~~~~v~~~~ 110 (204)
T 3njr_A 46 LTLAALAPRRGELLWDIGGGSGS----VSVEWCLA--G----GRAITIEP-RADRIENIQKN----IDTYGLSPRMRAVQ 110 (204)
T ss_dssp HHHHHHCCCTTCEEEEETCTTCH----HHHHHHHT--T----CEEEEEES-CHHHHHHHHHH----HHHTTCTTTEEEEE
T ss_pred HHHHhcCCCCCCEEEEecCCCCH----HHHHHHHc--C----CEEEEEeC-CHHHHHHHHHH----HHHcCCCCCEEEEe
Confidence 35555554455679999999874 34556666 2 46999987 54555544443 5566776 55544
Q ss_pred eecCCCCC-CccccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEEe
Q 048129 227 VLVTETKD-LNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVIIE 281 (412)
Q Consensus 227 v~~~~~e~-l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~E 281 (412)
- +..+ +.. ...=++++++..+ ..+ +++.+ +.|+|.-.+++.
T Consensus 111 ~---d~~~~~~~----~~~~D~v~~~~~~------~~~-~l~~~~~~LkpgG~lv~~ 153 (204)
T 3njr_A 111 G---TAPAALAD----LPLPEAVFIGGGG------SQA-LYDRLWEWLAPGTRIVAN 153 (204)
T ss_dssp S---CTTGGGTT----SCCCSEEEECSCC------CHH-HHHHHHHHSCTTCEEEEE
T ss_pred C---chhhhccc----CCCCCEEEECCcc------cHH-HHHHHHHhcCCCcEEEEE
Confidence 2 2322 111 1123556555422 344 66666 568998776664
No 95
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=72.92 E-value=14 Score=36.71 Aligned_cols=99 Identities=8% Similarity=0.068 Sum_probs=56.7
Q ss_pred EEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCCCCccccc
Q 048129 161 HLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVLVTETKDLNEDKF 240 (412)
Q Consensus 161 HIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~~~~~e~l~~~~l 240 (412)
+|+|+|.|.| ++-.+|.|.|. -+++||+..+ .+ +.. .+.++..|+.=....+. .+.+++..+.
T Consensus 86 ~VLDvG~GtG-----iLs~~Aa~aGA----~~V~ave~s~--~~-~~a---~~~~~~n~~~~~i~~i~-~~~~~~~lpe- 148 (376)
T 4hc4_A 86 TVLDVGAGTG-----ILSIFCAQAGA----RRVYAVEASA--IW-QQA---REVVRFNGLEDRVHVLP-GPVETVELPE- 148 (376)
T ss_dssp EEEEETCTTS-----HHHHHHHHTTC----SEEEEEECST--TH-HHH---HHHHHHTTCTTTEEEEE-SCTTTCCCSS-
T ss_pred EEEEeCCCcc-----HHHHHHHHhCC----CEEEEEeChH--HH-HHH---HHHHHHcCCCceEEEEe-eeeeeecCCc-
Confidence 5899998877 34445666543 3789998632 22 222 33455566654445554 4555554321
Q ss_pred cCCCCceEEEeecc-ccCCCCchHHHHHHH-HhcCCCEEEE
Q 048129 241 DLNAGEAVAVYSPI-LLSRTRHPDFLIKML-RKISPCVMVI 279 (412)
Q Consensus 241 ~~~~~E~laVn~~~-~L~~~~~~~~~L~~v-r~L~P~vvvl 279 (412)
.=++||-+++- .|...+.++.++... |-|+|.-+++
T Consensus 149 ---~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 149 ---QVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp ---CEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEE
T ss_pred ---cccEEEeecccccccccchhhhHHHHHHhhCCCCceEC
Confidence 11222222332 235667788898887 6788887766
No 96
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=72.79 E-value=11 Score=31.29 Aligned_cols=107 Identities=9% Similarity=-0.013 Sum_probs=58.8
Q ss_pred CeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCCCCcc
Q 048129 158 KRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVLVTETKDLNE 237 (412)
Q Consensus 158 ~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~~~~~e~l~~ 237 (412)
+.-+|+|+|.|.|. +...|+.+ |+ . +|||+. +...++.+.+++. ..|+..+|.. .+..+..+
T Consensus 41 ~~~~vLD~GcG~G~----~~~~l~~~--~~--~--v~~vD~-~~~~~~~a~~~~~----~~~~~~~~~~---~d~~~~~~ 102 (171)
T 1ws6_A 41 RRGRFLDPFAGSGA----VGLEAASE--GW--E--AVLVEK-DPEAVRLLKENVR----RTGLGARVVA---LPVEVFLP 102 (171)
T ss_dssp TCCEEEEETCSSCH----HHHHHHHT--TC--E--EEEECC-CHHHHHHHHHHHH----HHTCCCEEEC---SCHHHHHH
T ss_pred CCCeEEEeCCCcCH----HHHHHHHC--CC--e--EEEEeC-CHHHHHHHHHHHH----HcCCceEEEe---ccHHHHHH
Confidence 34479999999984 44555555 43 2 999987 5555655555443 3344333332 22222111
Q ss_pred ccccCC--CCceEEEeeccccCCCCchHHHHHHH---HhcCCCEEEEEeecCcCC
Q 048129 238 DKFDLN--AGEAVAVYSPILLSRTRHPDFLIKML---RKISPCVMVIIEVEANHN 287 (412)
Q Consensus 238 ~~l~~~--~~E~laVn~~~~L~~~~~~~~~L~~v---r~L~P~vvvl~E~ea~~n 287 (412)
. +.-. .=+.|+.|.++. ...+.+++.+ +-|+|.-+++++......
T Consensus 103 ~-~~~~~~~~D~i~~~~~~~----~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~~ 152 (171)
T 1ws6_A 103 E-AKAQGERFTVAFMAPPYA----MDLAALFGELLASGLVEAGGLYVLQHPKDLY 152 (171)
T ss_dssp H-HHHTTCCEEEEEECCCTT----SCTTHHHHHHHHHTCEEEEEEEEEEEETTSC
T ss_pred h-hhccCCceEEEEECCCCc----hhHHHHHHHHHhhcccCCCcEEEEEeCCccC
Confidence 0 1000 125666676664 2233455555 569999888887665544
No 97
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=72.62 E-value=30 Score=31.66 Aligned_cols=101 Identities=11% Similarity=0.132 Sum_probs=55.7
Q ss_pred eeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc--EEEEEeecCCCCCCc
Q 048129 159 RIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP--FSFKIVLVTETKDLN 236 (412)
Q Consensus 159 ~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~--Fef~~v~~~~~e~l~ 236 (412)
.-+|+|+|.|.|. +...|+.+ | .++|||+. +...++.+.+++ +..|++ .+|... +..++.
T Consensus 69 ~~~vLDiGcG~G~----~~~~l~~~--~----~~v~gvD~-s~~~~~~a~~~~----~~~~~~~~v~~~~~---d~~~~~ 130 (285)
T 4htf_A 69 KLRVLDAGGGEGQ----TAIKMAER--G----HQVILCDL-SAQMIDRAKQAA----EAKGVSDNMQFIHC---AAQDVA 130 (285)
T ss_dssp CCEEEEETCTTCH----HHHHHHHT--T----CEEEEEES-CHHHHHHHHHHH----HC-CCGGGEEEEES---CGGGTG
T ss_pred CCEEEEeCCcchH----HHHHHHHC--C----CEEEEEEC-CHHHHHHHHHHH----HhcCCCcceEEEEc---CHHHhh
Confidence 5789999999884 55666666 2 47999987 555555554443 445664 444443 333332
Q ss_pred cccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEEe
Q 048129 237 EDKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVIIE 281 (412)
Q Consensus 237 ~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~E 281 (412)
. +.-..=+.|+.+..+. ..+++ ..+|+.+ +.|+|.-.+++.
T Consensus 131 ~--~~~~~fD~v~~~~~l~-~~~~~-~~~l~~~~~~LkpgG~l~~~ 172 (285)
T 4htf_A 131 S--HLETPVDLILFHAVLE-WVADP-RSVLQTLWSVLRPGGVLSLM 172 (285)
T ss_dssp G--GCSSCEEEEEEESCGG-GCSCH-HHHHHHHHHTEEEEEEEEEE
T ss_pred h--hcCCCceEEEECchhh-cccCH-HHHHHHHHHHcCCCeEEEEE
Confidence 1 1111113444433332 22333 4556555 778998777765
No 98
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=72.56 E-value=38 Score=28.95 Aligned_cols=99 Identities=17% Similarity=0.118 Sum_probs=54.6
Q ss_pred EEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCCCCccccc
Q 048129 161 HLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVLVTETKDLNEDKF 240 (412)
Q Consensus 161 HIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~~~~~e~l~~~~l 240 (412)
.|+|+|.|.|. +...|+.+ | .++|||+. +...++.+.+++. ..|+..+|.... ..++. +
T Consensus 32 ~vLdiGcG~G~----~~~~l~~~--~----~~v~~vD~-s~~~~~~a~~~~~----~~~~~~~~~~~d---~~~~~---~ 90 (202)
T 2kw5_A 32 KILCLAEGEGR----NACFLASL--G----YEVTAVDQ-SSVGLAKAKQLAQ----EKGVKITTVQSN---LADFD---I 90 (202)
T ss_dssp EEEECCCSCTH----HHHHHHTT--T----CEEEEECS-SHHHHHHHHHHHH----HHTCCEEEECCB---TTTBS---C
T ss_pred CEEEECCCCCH----hHHHHHhC--C----CeEEEEEC-CHHHHHHHHHHHH----hcCCceEEEEcC---hhhcC---C
Confidence 89999998875 34556655 2 37999987 5555655555543 335555554332 33322 1
Q ss_pred cCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEEee
Q 048129 241 DLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVIIEV 282 (412)
Q Consensus 241 ~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~E~ 282 (412)
.-..=+.|+.+. ..+ .......+|+.+ +.|+|.-.+++..
T Consensus 91 ~~~~fD~v~~~~-~~~-~~~~~~~~l~~~~~~L~pgG~l~~~~ 131 (202)
T 2kw5_A 91 VADAWEGIVSIF-CHL-PSSLRQQLYPKVYQGLKPGGVFILEG 131 (202)
T ss_dssp CTTTCSEEEEEC-CCC-CHHHHHHHHHHHHTTCCSSEEEEEEE
T ss_pred CcCCccEEEEEh-hcC-CHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 111224444432 222 223445666665 6689987777654
No 99
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=72.50 E-value=24 Score=31.43 Aligned_cols=109 Identities=14% Similarity=0.113 Sum_probs=57.8
Q ss_pred HHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc--EEEEE
Q 048129 149 AIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP--FSFKI 226 (412)
Q Consensus 149 aIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~--Fef~~ 226 (412)
.|++.+.-...-+|+|+|.|.|.. ...|+.+. | .++|||+. +...++.+.++ ++..|++ .+|..
T Consensus 27 ~l~~~~~~~~~~~VLDiGcG~G~~----~~~la~~~-~----~~v~gvD~-s~~~l~~a~~~----~~~~~~~~~v~~~~ 92 (256)
T 1nkv_A 27 TLGRVLRMKPGTRILDLGSGSGEM----LCTWARDH-G----ITGTGIDM-SSLFTAQAKRR----AEELGVSERVHFIH 92 (256)
T ss_dssp HHHHHTCCCTTCEEEEETCTTCHH----HHHHHHHT-C----CEEEEEES-CHHHHHHHHHH----HHHTTCTTTEEEEE
T ss_pred HHHHhcCCCCCCEEEEECCCCCHH----HHHHHHhc-C----CeEEEEeC-CHHHHHHHHHH----HHhcCCCcceEEEE
Confidence 344444434455899999999873 34455443 2 35799987 54555555444 4455654 66654
Q ss_pred eecCCCCCCccccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEE
Q 048129 227 VLVTETKDLNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVII 280 (412)
Q Consensus 227 v~~~~~e~l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~ 280 (412)
. +.+++..+ ..=+.|+. ...+........+|+.+ |.|+|.-.+++
T Consensus 93 ~---d~~~~~~~----~~fD~V~~--~~~~~~~~~~~~~l~~~~r~LkpgG~l~~ 138 (256)
T 1nkv_A 93 N---DAAGYVAN----EKCDVAAC--VGATWIAGGFAGAEELLAQSLKPGGIMLI 138 (256)
T ss_dssp S---CCTTCCCS----SCEEEEEE--ESCGGGTSSSHHHHHHHTTSEEEEEEEEE
T ss_pred C---ChHhCCcC----CCCCEEEE--CCChHhcCCHHHHHHHHHHHcCCCeEEEE
Confidence 3 33333210 11123333 22231112334566665 67899876655
No 100
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=72.21 E-value=16 Score=34.55 Aligned_cols=134 Identities=10% Similarity=-0.011 Sum_probs=70.5
Q ss_pred eeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcC-CcEEEEEeecCCCCCCcc
Q 048129 159 RIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWN-LPFSFKIVLVTETKDLNE 237 (412)
Q Consensus 159 ~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lg-v~Fef~~v~~~~~e~l~~ 237 (412)
.-+|+|+|.|.|. +...++.+. | .-+||+|+. +...++.+.+++.+++..++ -.+++.. .+..+..+
T Consensus 91 ~~~VLdiG~G~G~----~~~~l~~~~---~-~~~v~~vDi-d~~~~~~a~~~~~~~~~~~~~~~v~~~~---~D~~~~l~ 158 (296)
T 1inl_A 91 PKKVLIIGGGDGG----TLREVLKHD---S-VEKAILCEV-DGLVIEAARKYLKQTSCGFDDPRAEIVI---ANGAEYVR 158 (296)
T ss_dssp CCEEEEEECTTCH----HHHHHTTST---T-CSEEEEEES-CHHHHHHHHHHCHHHHGGGGCTTEEEEE---SCHHHHGG
T ss_pred CCEEEEEcCCcCH----HHHHHHhcC---C-CCEEEEEEC-CHHHHHHHHHHhHhhccccCCCceEEEE---CcHHHHHh
Confidence 3589999999885 455666553 2 368999987 55667777777666544442 2344433 22211111
Q ss_pred ccccCCCCceEEEeeccc-cCCCC--chHHHHHHH-HhcCCCEEEEEeecCcCCCCchHHHHHHHHHHHHHHHHHh
Q 048129 238 DKFDLNAGEAVAVYSPIL-LSRTR--HPDFLIKML-RKISPCVMVIIEVEANHNSQNFEDRFFEVLFHYSASFDCL 309 (412)
Q Consensus 238 ~~l~~~~~E~laVn~~~~-L~~~~--~~~~~L~~v-r~L~P~vvvl~E~ea~~n~~~F~~RF~eaL~~YsalFdsL 309 (412)
. .-..=+.|++|.... ..... ....+++.+ +.|+|.-+++++...... -.+.+.+.+.....+|...
T Consensus 159 ~--~~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~---~~~~~~~~~~~l~~~F~~v 229 (296)
T 1inl_A 159 K--FKNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDPFY---DIGWFKLAYRRISKVFPIT 229 (296)
T ss_dssp G--CSSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEECCCTTT---THHHHHHHHHHHHHHCSEE
T ss_pred h--CCCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCccc---CHHHHHHHHHHHHHHCCce
Confidence 0 001225777765433 21111 124566655 778999988886432111 1344555555555555543
No 101
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=72.20 E-value=25 Score=32.61 Aligned_cols=111 Identities=12% Similarity=0.017 Sum_probs=58.2
Q ss_pred CCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCCCCc
Q 048129 157 AKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVLVTETKDLN 236 (412)
Q Consensus 157 ~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~~~~~e~l~ 236 (412)
...-+|+|+|.|.|. +...|+.+- +| ..++|||+. +...++.+.+++.+. ....-..+|... +.+++.
T Consensus 35 ~~~~~vLDiGcG~G~----~~~~la~~~--~~-~~~v~gvD~-s~~~~~~a~~~~~~~-~~~~~~v~~~~~---d~~~~~ 102 (299)
T 3g5t_A 35 GERKLLVDVGCGPGT----ATLQMAQEL--KP-FEQIIGSDL-SATMIKTAEVIKEGS-PDTYKNVSFKIS---SSDDFK 102 (299)
T ss_dssp SCCSEEEEETCTTTH----HHHHHHHHS--SC-CSEEEEEES-CHHHHHHHHHHHHHC-C-CCTTEEEEEC---CTTCCG
T ss_pred CCCCEEEEECCCCCH----HHHHHHHhC--CC-CCEEEEEeC-CHHHHHHHHHHHHhc-cCCCCceEEEEc---CHHhCC
Confidence 356789999999884 444555431 12 368999987 555566655554332 011334566544 344433
Q ss_pred ccc-ccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEE
Q 048129 237 EDK-FDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVII 280 (412)
Q Consensus 237 ~~~-l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~ 280 (412)
... ..+..+..=+|-|...+... ....+|+.+ +.|+|.-.+++
T Consensus 103 ~~~~~~~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 103 FLGADSVDKQKIDMITAVECAHWF-DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp GGCTTTTTSSCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEE
T ss_pred ccccccccCCCeeEEeHhhHHHHh-CHHHHHHHHHHhcCCCcEEEE
Confidence 211 01111322233333333222 455566655 67899877765
No 102
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=72.07 E-value=13 Score=35.37 Aligned_cols=134 Identities=7% Similarity=0.087 Sum_probs=70.1
Q ss_pred eeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhc-CCcEEEEEeecCCCCCCcc
Q 048129 159 RIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETW-NLPFSFKIVLVTETKDLNE 237 (412)
Q Consensus 159 ~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~l-gv~Fef~~v~~~~~e~l~~ 237 (412)
.-+|+|+|.|.|. +...|+.+. | .-+||+|+. +...++.+.+++...+..+ +-.+++.. .+..+.-+
T Consensus 96 ~~~VLdiG~G~G~----~~~~l~~~~---~-~~~v~~vDi-d~~~i~~ar~~~~~~~~~~~~~rv~v~~---~Da~~~l~ 163 (304)
T 2o07_A 96 PRKVLIIGGGDGG----VLREVVKHP---S-VESVVQCEI-DEDVIQVSKKFLPGMAIGYSSSKLTLHV---GDGFEFMK 163 (304)
T ss_dssp CCEEEEEECTTSH----HHHHHTTCT---T-CCEEEEEES-CHHHHHHHHHHCHHHHGGGGCTTEEEEE---SCHHHHHH
T ss_pred CCEEEEECCCchH----HHHHHHHcC---C-CCEEEEEEC-CHHHHHHHHHHhHHhhcccCCCcEEEEE---CcHHHHHh
Confidence 3589999999885 445666552 2 378999987 5566777777766554333 22344442 22111100
Q ss_pred ccccCCCCceEEEeeccccCCCC--chHHHHHHH-HhcCCCEEEEEeecCcCCCCchHHHHHHHHHHHHHHHHHh
Q 048129 238 DKFDLNAGEAVAVYSPILLSRTR--HPDFLIKML-RKISPCVMVIIEVEANHNSQNFEDRFFEVLFHYSASFDCL 309 (412)
Q Consensus 238 ~~l~~~~~E~laVn~~~~L~~~~--~~~~~L~~v-r~L~P~vvvl~E~ea~~n~~~F~~RF~eaL~~YsalFdsL 309 (412)
. .-..=+.|++++......+. ....+++.+ +.|+|.-+++++.......+. .+.+...+...+|...
T Consensus 164 ~--~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~---~~~~~~~~l~~~f~~v 233 (304)
T 2o07_A 164 Q--NQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQWLHLD---LIKEMRQFCQSLFPVV 233 (304)
T ss_dssp T--CSSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEEECTTTCHH---HHHHHHHHHHHHCSEE
T ss_pred h--CCCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCCcccchH---HHHHHHHHHHHhCCCc
Confidence 0 01122677777654331111 123456655 778999999987655433322 2333334444555533
No 103
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=70.54 E-value=11 Score=34.08 Aligned_cols=98 Identities=18% Similarity=0.208 Sum_probs=54.9
Q ss_pred CeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCCCCcc
Q 048129 158 KRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVLVTETKDLNE 237 (412)
Q Consensus 158 ~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~~~~~e~l~~ 237 (412)
+.-.|+|+|.|.|. +...|+.+ |+ ++|||+. +...++.+.+++. + .+|.. .++.++..
T Consensus 50 ~~~~vLDiGcG~G~----~~~~l~~~--~~----~v~gvD~-s~~~~~~a~~~~~------~--~~~~~---~d~~~~~~ 107 (263)
T 3pfg_A 50 KAASLLDVACGTGM----HLRHLADS--FG----TVEGLEL-SADMLAIARRRNP------D--AVLHH---GDMRDFSL 107 (263)
T ss_dssp TCCEEEEETCTTSH----HHHHHTTT--SS----EEEEEES-CHHHHHHHHHHCT------T--SEEEE---CCTTTCCC
T ss_pred CCCcEEEeCCcCCH----HHHHHHHc--CC----eEEEEEC-CHHHHHHHHhhCC------C--CEEEE---CChHHCCc
Confidence 34679999999884 45666665 32 6999987 5455555544422 3 33333 23333321
Q ss_pred ccccCCCCceEEEee-ccc-cCCCCchHHHHHHH-HhcCCCEEEEEe
Q 048129 238 DKFDLNAGEAVAVYS-PIL-LSRTRHPDFLIKML-RKISPCVMVIIE 281 (412)
Q Consensus 238 ~~l~~~~~E~laVn~-~~~-L~~~~~~~~~L~~v-r~L~P~vvvl~E 281 (412)
-..=+.|+.+. .+. +..+.....+|+.+ +.|+|.-+++++
T Consensus 108 ----~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 108 ----GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp ----SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred ----cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 01113444433 332 23334555667766 668999888886
No 104
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=70.53 E-value=31 Score=30.12 Aligned_cols=109 Identities=8% Similarity=0.149 Sum_probs=59.2
Q ss_pred CeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc-EEEEEeecCCCCCCc
Q 048129 158 KRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP-FSFKIVLVTETKDLN 236 (412)
Q Consensus 158 ~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~-Fef~~v~~~~~e~l~ 236 (412)
..-.|+|+|.|.|. +...|+.+. | ..++|||+. +...++.+.+++ +..|++ .+|.. .+..++.
T Consensus 41 ~~~~vLDiGcG~G~----~~~~la~~~--p--~~~v~gvD~-s~~~l~~a~~~~----~~~~~~~v~~~~---~d~~~~~ 104 (214)
T 1yzh_A 41 DNPIHVEVGSGKGA----FVSGMAKQN--P--DINYIGIDI-QKSVLSYALDKV----LEVGVPNIKLLW---VDGSDLT 104 (214)
T ss_dssp CCCEEEEESCTTSH----HHHHHHHHC--T--TSEEEEEES-CHHHHHHHHHHH----HHHCCSSEEEEE---CCSSCGG
T ss_pred CCCeEEEEccCcCH----HHHHHHHHC--C--CCCEEEEEc-CHHHHHHHHHHH----HHcCCCCEEEEe---CCHHHHH
Confidence 34469999999884 334455542 2 378999987 555566555554 334553 44443 2333322
Q ss_pred cccccCCCCceEEEeeccccCC--CC----chHHHHHHH-HhcCCCEEEEEeec
Q 048129 237 EDKFDLNAGEAVAVYSPILLSR--TR----HPDFLIKML-RKISPCVMVIIEVE 283 (412)
Q Consensus 237 ~~~l~~~~~E~laVn~~~~L~~--~~----~~~~~L~~v-r~L~P~vvvl~E~e 283 (412)
. .+.-..=+.|++|....... .. ....+|+.+ +.|+|.-+++++.+
T Consensus 105 ~-~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 105 D-YFEDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp G-TSCTTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred h-hcCCCCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 1 11111225666664321100 00 125677776 45999988887654
No 105
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=69.64 E-value=44 Score=33.27 Aligned_cols=109 Identities=15% Similarity=0.166 Sum_probs=62.6
Q ss_pred HHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc-EEEEEee
Q 048129 150 IIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP-FSFKIVL 228 (412)
Q Consensus 150 IleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~-Fef~~v~ 228 (412)
+++.+.....-.|+|+|.|.|.--. .||.+ + -++|||+. +...++.+.+++ +..|++ .+|..-
T Consensus 278 ~~~~l~~~~~~~VLDlgcG~G~~~~----~la~~--~----~~V~gvD~-s~~al~~A~~n~----~~~~~~~v~f~~~- 341 (433)
T 1uwv_A 278 ALEWLDVQPEDRVLDLFCGMGNFTL----PLATQ--A----ASVVGVEG-VPALVEKGQQNA----RLNGLQNVTFYHE- 341 (433)
T ss_dssp HHHHHTCCTTCEEEEESCTTTTTHH----HHHTT--S----SEEEEEES-CHHHHHHHHHHH----HHTTCCSEEEEEC-
T ss_pred HHHhhcCCCCCEEEECCCCCCHHHH----HHHhh--C----CEEEEEeC-CHHHHHHHHHHH----HHcCCCceEEEEC-
Confidence 3344433334579999999886443 45554 1 46999987 556666665543 455664 555443
Q ss_pred cCCCCCCccc-cccCCCCceEEEeeccccCCCCchHHHHHHHHhcCCCEEEEEe
Q 048129 229 VTETKDLNED-KFDLNAGEAVAVYSPILLSRTRHPDFLIKMLRKISPCVMVIIE 281 (412)
Q Consensus 229 ~~~~e~l~~~-~l~~~~~E~laVn~~~~L~~~~~~~~~L~~vr~L~P~vvvl~E 281 (412)
+.++.-.. .+.-..=+.|++|-+.. ..+.+++.+..++|+-++.+.
T Consensus 342 --d~~~~l~~~~~~~~~fD~Vv~dPPr~-----g~~~~~~~l~~~~p~~ivyvs 388 (433)
T 1uwv_A 342 --NLEEDVTKQPWAKNGFDKVLLDPARA-----GAAGVMQQIIKLEPIRIVYVS 388 (433)
T ss_dssp --CTTSCCSSSGGGTTCCSEEEECCCTT-----CCHHHHHHHHHHCCSEEEEEE
T ss_pred --CHHHHhhhhhhhcCCCCEEEECCCCc-----cHHHHHHHHHhcCCCeEEEEE
Confidence 33331111 11111225666654331 235789999999999988763
No 106
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=69.34 E-value=15 Score=30.85 Aligned_cols=107 Identities=16% Similarity=0.091 Sum_probs=60.6
Q ss_pred eeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc--EEEEEeecCCCCCCc
Q 048129 159 RIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP--FSFKIVLVTETKDLN 236 (412)
Q Consensus 159 ~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~--Fef~~v~~~~~e~l~ 236 (412)
.-.|+|+|.|.|.- ...|+.++ .-++|||+. +...++.+.++ ++..|++ .+|.. .+..+..
T Consensus 32 ~~~vLDlGcG~G~~----~~~l~~~~-----~~~v~~vD~-~~~~~~~a~~~----~~~~~~~~~~~~~~---~d~~~~~ 94 (177)
T 2esr_A 32 GGRVLDLFAGSGGL----AIEAVSRG-----MSAAVLVEK-NRKAQAIIQDN----IIMTKAENRFTLLK---MEAERAI 94 (177)
T ss_dssp SCEEEEETCTTCHH----HHHHHHTT-----CCEEEEECC-CHHHHHHHHHH----HHTTTCGGGEEEEC---SCHHHHH
T ss_pred CCeEEEeCCCCCHH----HHHHHHcC-----CCEEEEEEC-CHHHHHHHHHH----HHHcCCCCceEEEE---CcHHHhH
Confidence 34799999998853 33455552 257999987 55555555444 4455664 44432 2232211
Q ss_pred cccccCCCCceEEEeeccccCCCCchHHHHHHH---HhcCCCEEEEEeecCcCC
Q 048129 237 EDKFDLNAGEAVAVYSPILLSRTRHPDFLIKML---RKISPCVMVIIEVEANHN 287 (412)
Q Consensus 237 ~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v---r~L~P~vvvl~E~ea~~n 287 (412)
+. +. ..=+.|+.|.++.. ...+.+++.+ +.|+|.-+++++......
T Consensus 95 ~~-~~-~~fD~i~~~~~~~~---~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~ 143 (177)
T 2esr_A 95 DC-LT-GRFDLVFLDPPYAK---ETIVATIEALAAKNLLSEQVMVVCETDKTVL 143 (177)
T ss_dssp HH-BC-SCEEEEEECCSSHH---HHHHHHHHHHHHTTCEEEEEEEEEEEETTCC
T ss_pred Hh-hc-CCCCEEEECCCCCc---chHHHHHHHHHhCCCcCCCcEEEEEECCccc
Confidence 10 00 11256666655432 2345566666 678999888887766554
No 107
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=69.17 E-value=32 Score=32.20 Aligned_cols=109 Identities=19% Similarity=0.187 Sum_probs=61.7
Q ss_pred CeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc--EEEEEeecCCCCCC
Q 048129 158 KRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP--FSFKIVLVTETKDL 235 (412)
Q Consensus 158 ~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~--Fef~~v~~~~~e~l 235 (412)
..-.|+|+|.|.|.- .-.|+.+ | ..++|||+. +...++.+.++ ++..|+. .+|..- ++.+.
T Consensus 123 ~~~~vLDlG~GsG~~----~~~la~~----~-~~~v~~vDi-s~~al~~A~~n----~~~~~l~~~v~~~~~---D~~~~ 185 (284)
T 1nv8_A 123 GIKTVADIGTGSGAI----GVSVAKF----S-DAIVFATDV-SSKAVEIARKN----AERHGVSDRFFVRKG---EFLEP 185 (284)
T ss_dssp TCCEEEEESCTTSHH----HHHHHHH----S-SCEEEEEES-CHHHHHHHHHH----HHHTTCTTSEEEEES---STTGG
T ss_pred CCCEEEEEeCchhHH----HHHHHHC----C-CCEEEEEEC-CHHHHHHHHHH----HHHcCCCCceEEEEC---cchhh
Confidence 345799999999853 3445544 2 378999987 55666655554 3455765 555542 33221
Q ss_pred ccccccCCCCceEEEeecccc------------------CCCCchHHHHHHH-HhcCCCEEEEEeecCc
Q 048129 236 NEDKFDLNAGEAVAVYSPILL------------------SRTRHPDFLIKML-RKISPCVMVIIEVEAN 285 (412)
Q Consensus 236 ~~~~l~~~~~E~laVn~~~~L------------------~~~~~~~~~L~~v-r~L~P~vvvl~E~ea~ 285 (412)
.+..+ .+-+.|+.|-++.- ...+.++.+-+.+ +.++|.-.+++|...+
T Consensus 186 ~~~~f--~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~~ 252 (284)
T 1nv8_A 186 FKEKF--ASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGED 252 (284)
T ss_dssp GGGGT--TTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCTT
T ss_pred ccccc--CCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECch
Confidence 11111 11167777743321 1123344444455 6889998888876543
No 108
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=68.49 E-value=23 Score=29.97 Aligned_cols=102 Identities=16% Similarity=0.152 Sum_probs=53.6
Q ss_pred eEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCC-cEEEEEeecCCCCCCccc
Q 048129 160 IHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNL-PFSFKIVLVTETKDLNED 238 (412)
Q Consensus 160 vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv-~Fef~~v~~~~~e~l~~~ 238 (412)
-+|+|+|.|.|.- ...|+.+ + -++|||+. +...++.+.+++.+ .|+ ..+|.. ...+++..
T Consensus 24 ~~vLDiGcG~G~~----~~~la~~-~-----~~v~~vD~-s~~~l~~a~~~~~~----~~~~~v~~~~---~~~~~l~~- 84 (185)
T 3mti_A 24 SIVVDATMGNGND----TAFLAGL-S-----KKVYAFDV-QEQALGKTSQRLSD----LGIENTELIL---DGHENLDH- 84 (185)
T ss_dssp CEEEESCCTTSHH----HHHHHTT-S-----SEEEEEES-CHHHHHHHHHHHHH----HTCCCEEEEE---SCGGGGGG-
T ss_pred CEEEEEcCCCCHH----HHHHHHh-C-----CEEEEEEC-CHHHHHHHHHHHHH----cCCCcEEEEe---CcHHHHHh-
Confidence 3799999998853 3446655 1 57999987 55666666655543 344 244443 23333221
Q ss_pred cccCCCCceEEEeeccccC-------CCCchHHHHHHH-HhcCCCEEEEEe
Q 048129 239 KFDLNAGEAVAVYSPILLS-------RTRHPDFLIKML-RKISPCVMVIIE 281 (412)
Q Consensus 239 ~l~~~~~E~laVn~~~~L~-------~~~~~~~~L~~v-r~L~P~vvvl~E 281 (412)
+.-.+=+.++.|..+--. .+.....+|+.+ +.|+|.-.+++.
T Consensus 85 -~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 134 (185)
T 3mti_A 85 -YVREPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIM 134 (185)
T ss_dssp -TCCSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -hccCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEE
Confidence 110112455555432111 122233445544 779998776654
No 109
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=68.22 E-value=19 Score=31.79 Aligned_cols=100 Identities=15% Similarity=0.238 Sum_probs=56.1
Q ss_pred eEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCCCCcccc
Q 048129 160 IHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVLVTETKDLNEDK 239 (412)
Q Consensus 160 vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~~~~~e~l~~~~ 239 (412)
-.|+|+|.|.|. +...|+.+ .++|||+. +...++.+.+++. ..+...+|... +..++.
T Consensus 35 ~~vLdiG~G~G~----~~~~l~~~-------~~v~~vD~-s~~~~~~a~~~~~----~~~~~~~~~~~---d~~~~~--- 92 (243)
T 3d2l_A 35 KRIADIGCGTGT----ATLLLADH-------YEVTGVDL-SEEMLEIAQEKAM----ETNRHVDFWVQ---DMRELE--- 92 (243)
T ss_dssp CEEEEESCTTCH----HHHHHTTT-------SEEEEEES-CHHHHHHHHHHHH----HTTCCCEEEEC---CGGGCC---
T ss_pred CeEEEecCCCCH----HHHHHhhC-------CeEEEEEC-CHHHHHHHHHhhh----hcCCceEEEEc---ChhhcC---
Confidence 579999999885 34455544 47999987 5555665555543 33444555443 232222
Q ss_pred ccCCCCceEEEee-ccc-cCCCCchHHHHHHH-HhcCCCEEEEEee
Q 048129 240 FDLNAGEAVAVYS-PIL-LSRTRHPDFLIKML-RKISPCVMVIIEV 282 (412)
Q Consensus 240 l~~~~~E~laVn~-~~~-L~~~~~~~~~L~~v-r~L~P~vvvl~E~ 282 (412)
+. ..=+.|+.++ .+. +..+.....+|+.+ +.|+|.-.++++-
T Consensus 93 ~~-~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 137 (243)
T 3d2l_A 93 LP-EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDV 137 (243)
T ss_dssp CS-SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CC-CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 11 1224444433 222 23334455667665 6689998887754
No 110
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=68.17 E-value=23 Score=31.10 Aligned_cols=105 Identities=14% Similarity=0.202 Sum_probs=55.1
Q ss_pred HHHHhhhhc-CCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEE
Q 048129 148 QAIIERVAS-AKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKI 226 (412)
Q Consensus 148 qaIleA~~g-~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~ 226 (412)
+.+++.+.. .+.-+|+|+|.|.|. +...|+.+ ++ ++|||+. +...++.+.+++.. ..+|..
T Consensus 31 ~~~~~~l~~~~~~~~vLDiGcG~G~----~~~~l~~~--~~----~v~gvD~-s~~~~~~a~~~~~~-------~v~~~~ 92 (250)
T 2p7i_A 31 PFMVRAFTPFFRPGNLLELGSFKGD----FTSRLQEH--FN----DITCVEA-SEEAISHAQGRLKD-------GITYIH 92 (250)
T ss_dssp HHHHHHHGGGCCSSCEEEESCTTSH----HHHHHTTT--CS----CEEEEES-CHHHHHHHHHHSCS-------CEEEEE
T ss_pred HHHHHHHHhhcCCCcEEEECCCCCH----HHHHHHHh--CC----cEEEEeC-CHHHHHHHHHhhhC-------CeEEEE
Confidence 334455542 233469999999885 45566655 33 4899987 54545544443221 344433
Q ss_pred eecCCCCCCccccccCCCC--ceEEEeeccccCCCCchHHHHHHHH--hcCCCEEEEEe
Q 048129 227 VLVTETKDLNEDKFDLNAG--EAVAVYSPILLSRTRHPDFLIKMLR--KISPCVMVIIE 281 (412)
Q Consensus 227 v~~~~~e~l~~~~l~~~~~--E~laVn~~~~L~~~~~~~~~L~~vr--~L~P~vvvl~E 281 (412)
. +.+++. .++ +.|+.+ ..|..-...+.+|+.++ -|+|.-.+++.
T Consensus 93 ~---d~~~~~------~~~~fD~v~~~--~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~ 140 (250)
T 2p7i_A 93 S---RFEDAQ------LPRRYDNIVLT--HVLEHIDDPVALLKRINDDWLAEGGRLFLV 140 (250)
T ss_dssp S---CGGGCC------CSSCEEEEEEE--SCGGGCSSHHHHHHHHHHTTEEEEEEEEEE
T ss_pred c---cHHHcC------cCCcccEEEEh--hHHHhhcCHHHHHHHHHHHhcCCCCEEEEE
Confidence 2 333331 122 333333 33322223356777765 78997666653
No 111
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=68.03 E-value=8.8 Score=36.07 Aligned_cols=112 Identities=10% Similarity=0.129 Sum_probs=60.2
Q ss_pred eeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhc-CCcEEEEEeecCCCCCCcc
Q 048129 159 RIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETW-NLPFSFKIVLVTETKDLNE 237 (412)
Q Consensus 159 ~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~l-gv~Fef~~v~~~~~e~l~~ 237 (412)
.-+|+|+|.|.|. +...++.++ | .-++|+|+. +...++.+.+++...+..+ +-.+++..- +..+...
T Consensus 79 ~~~VLdiG~G~G~----~~~~l~~~~---~-~~~v~~vDi-d~~~i~~a~~~~~~~~~~~~~~~v~~~~~---D~~~~l~ 146 (283)
T 2i7c_A 79 PKNVLVVGGGDGG----IIRELCKYK---S-VENIDICEI-DETVIEVSKIYFKNISCGYEDKRVNVFIE---DASKFLE 146 (283)
T ss_dssp CCEEEEEECTTSH----HHHHHTTCT---T-CCEEEEEES-CHHHHHHHHHHCTTTSGGGGSTTEEEEES---CHHHHHH
T ss_pred CCeEEEEeCCcCH----HHHHHHHcC---C-CCEEEEEEC-CHHHHHHHHHHhHHhccccCCCcEEEEEC---ChHHHHH
Confidence 3589999999884 555666542 3 378999987 5455665555543332222 122444322 2211110
Q ss_pred ccccCCCCceEEEeeccccCCCCch--HHHHHHH-HhcCCCEEEEEeecC
Q 048129 238 DKFDLNAGEAVAVYSPILLSRTRHP--DFLIKML-RKISPCVMVIIEVEA 284 (412)
Q Consensus 238 ~~l~~~~~E~laVn~~~~L~~~~~~--~~~L~~v-r~L~P~vvvl~E~ea 284 (412)
. . -..=+.|++++.........+ ..+++.+ +.|+|.-++++....
T Consensus 147 ~-~-~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~ 194 (283)
T 2i7c_A 147 N-V-TNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCES 194 (283)
T ss_dssp H-C-CSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred h-C-CCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCC
Confidence 0 0 112257777654433222222 5677766 678999888876443
No 112
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=67.91 E-value=22 Score=33.12 Aligned_cols=133 Identities=11% Similarity=0.053 Sum_probs=71.2
Q ss_pred eeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCC-cEEEEEeecCCCCCCcc
Q 048129 159 RIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNL-PFSFKIVLVTETKDLNE 237 (412)
Q Consensus 159 ~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv-~Fef~~v~~~~~e~l~~ 237 (412)
.-+|+|+|.|.|. +...++.++ | .-+||+|+. +...++.+.+++.+.+..++- .+++.. .+..+.-.
T Consensus 76 ~~~VLdiG~G~G~----~~~~l~~~~---~-~~~v~~vEi-d~~~v~~ar~~~~~~~~~~~~~rv~v~~---~D~~~~l~ 143 (275)
T 1iy9_A 76 PEHVLVVGGGDGG----VIREILKHP---S-VKKATLVDI-DGKVIEYSKKFLPSIAGKLDDPRVDVQV---DDGFMHIA 143 (275)
T ss_dssp CCEEEEESCTTCH----HHHHHTTCT---T-CSEEEEEES-CHHHHHHHHHHCHHHHTTTTSTTEEEEE---SCSHHHHH
T ss_pred CCEEEEECCchHH----HHHHHHhCC---C-CceEEEEEC-CHHHHHHHHHHhHhhccccCCCceEEEE---CcHHHHHh
Confidence 4579999999884 455666553 2 368999987 556677777776665433321 244432 22111100
Q ss_pred ccccCCCCceEEEeeccccCCCCc--hHHHHHHH-HhcCCCEEEEEeecCcCCCCchHHHHHHHHHHHHHHHHH
Q 048129 238 DKFDLNAGEAVAVYSPILLSRTRH--PDFLIKML-RKISPCVMVIIEVEANHNSQNFEDRFFEVLFHYSASFDC 308 (412)
Q Consensus 238 ~~l~~~~~E~laVn~~~~L~~~~~--~~~~L~~v-r~L~P~vvvl~E~ea~~n~~~F~~RF~eaL~~YsalFds 308 (412)
. . -..=+.|+++.......+.. ...+++.+ +.|+|.-++++........ .+.+.+.+.....+|..
T Consensus 144 ~-~-~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~---~~~~~~~~~~l~~~F~~ 212 (275)
T 1iy9_A 144 K-S-ENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFT---PELITNVQRDVKEIFPI 212 (275)
T ss_dssp T-C-CSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTTC---HHHHHHHHHHHHTTCSE
T ss_pred h-C-CCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccc---HHHHHHHHHHHHHhCCC
Confidence 0 0 01226677765443211111 13456554 7899999888864321111 34455555555555544
No 113
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=67.69 E-value=23 Score=30.75 Aligned_cols=19 Identities=5% Similarity=0.216 Sum_probs=15.5
Q ss_pred chhHHHHHHHhCCCeeecC
Q 048129 349 KIDAWRKFFHRFGMVEAEL 367 (412)
Q Consensus 349 ~~~~W~~r~~~aGF~~~~l 367 (412)
+.+.|...++.+||+.+..
T Consensus 158 ~~~~~~~~l~~~Gf~~~~~ 176 (215)
T 2zfu_A 158 DVRTFLRAVTKLGFKIVSK 176 (215)
T ss_dssp CHHHHHHHHHHTTEEEEEE
T ss_pred CHHHHHHHHHHCCCEEEEE
Confidence 5578999999999988653
No 114
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=66.50 E-value=32 Score=29.06 Aligned_cols=89 Identities=10% Similarity=0.152 Sum_probs=48.4
Q ss_pred EEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCCCCccccc
Q 048129 161 HLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVLVTETKDLNEDKF 240 (412)
Q Consensus 161 HIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~~~~~e~l~~~~l 240 (412)
.|+|+|.|.|. +...|+.+. ++|||+. +...++. .-++. |.. .+..+..+
T Consensus 26 ~vLD~GcG~G~----~~~~l~~~~-------~v~gvD~-s~~~~~~----------~~~~~--~~~---~d~~~~~~--- 75 (170)
T 3q87_B 26 IVLDLGTSTGV----ITEQLRKRN-------TVVSTDL-NIRALES----------HRGGN--LVR---ADLLCSIN--- 75 (170)
T ss_dssp EEEEETCTTCH----HHHHHTTTS-------EEEEEES-CHHHHHT----------CSSSC--EEE---CSTTTTBC---
T ss_pred eEEEeccCccH----HHHHHHhcC-------cEEEEEC-CHHHHhc----------ccCCe--EEE---CChhhhcc---
Confidence 89999999884 455666552 8999987 4443433 22333 222 22222111
Q ss_pred cCCCCceEEEeeccccCCC--------CchHHHHHHHHhcCCCEEEEEe
Q 048129 241 DLNAGEAVAVYSPILLSRT--------RHPDFLIKMLRKISPCVMVIIE 281 (412)
Q Consensus 241 ~~~~~E~laVn~~~~L~~~--------~~~~~~L~~vr~L~P~vvvl~E 281 (412)
-..=+.|+.|.++.-... ...+.+-+.++.+ |.-.+++.
T Consensus 76 -~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~ 122 (170)
T 3q87_B 76 -QESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLL 122 (170)
T ss_dssp -GGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEE
T ss_pred -cCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEE
Confidence 122357777877764111 2344445556667 77665553
No 115
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=65.74 E-value=20 Score=34.27 Aligned_cols=132 Identities=14% Similarity=0.105 Sum_probs=72.9
Q ss_pred HHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEee
Q 048129 149 AIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVL 228 (412)
Q Consensus 149 aIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~ 228 (412)
.|++.+.. --.|+|+|.|.|. |--.++.. +| ..+++++|- +...++ ...+++..+|+++.|....
T Consensus 125 ~i~~~i~~--p~~VLDLGCG~Gp----LAl~~~~~---~p-~a~y~a~DI-d~~~le----~a~~~l~~~g~~~~~~v~D 189 (281)
T 3lcv_B 125 ELFRHLPR--PNTLRDLACGLNP----LAAPWMGL---PA-ETVYIASDI-DARLVG----FVDEALTRLNVPHRTNVAD 189 (281)
T ss_dssp HHGGGSCC--CSEEEETTCTTGG----GCCTTTTC---CT-TCEEEEEES-BHHHHH----HHHHHHHHTTCCEEEEECC
T ss_pred HHHhccCC--CceeeeeccCccH----HHHHHHhh---CC-CCEEEEEeC-CHHHHH----HHHHHHHhcCCCceEEEee
Confidence 44555533 4488999998662 22222222 23 489999986 444444 4445567789998886653
Q ss_pred cCCCCCCccccccCCCCceEEEeeccccCCCCchHHHHHHHHhcCCCEEEEEeec--CcCCCCchHHHHHHHHHHHHHHH
Q 048129 229 VTETKDLNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKMLRKISPCVMVIIEVE--ANHNSQNFEDRFFEVLFHYSASF 306 (412)
Q Consensus 229 ~~~~e~l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~vr~L~P~vvvl~E~e--a~~n~~~F~~RF~eaL~~YsalF 306 (412)
. . ... .-.+.+++.+|-....-........++.+.+|+|..+++.=+- .+.-++.+. ..|+..|
T Consensus 190 ~--~----~~~-p~~~~DvaL~lkti~~Le~q~kg~g~~ll~aL~~~~vvVSfp~ksl~Grs~gm~-------~~Y~~~~ 255 (281)
T 3lcv_B 190 L--L----EDR-LDEPADVTLLLKTLPCLETQQRGSGWEVIDIVNSPNIVVTFPTKSLGQRSKGMF-------QNYSQSF 255 (281)
T ss_dssp T--T----TSC-CCSCCSEEEETTCHHHHHHHSTTHHHHHHHHSSCSEEEEEEECC-------CHH-------HHHHHHH
T ss_pred e--c----ccC-CCCCcchHHHHHHHHHhhhhhhHHHHHHHHHhCCCCEEEeccchhhcCCCcchh-------hHHHHHH
Confidence 2 1 111 1234567777766655111112234599999999999997444 333334433 3466666
Q ss_pred HHh
Q 048129 307 DCL 309 (412)
Q Consensus 307 dsL 309 (412)
+..
T Consensus 256 e~~ 258 (281)
T 3lcv_B 256 ESQ 258 (281)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 116
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=65.65 E-value=19 Score=32.27 Aligned_cols=108 Identities=10% Similarity=0.167 Sum_probs=58.1
Q ss_pred CeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc-EEEEEeecCCCCCCc
Q 048129 158 KRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP-FSFKIVLVTETKDLN 236 (412)
Q Consensus 158 ~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~-Fef~~v~~~~~e~l~ 236 (412)
+.-.|+|+|.|.|.- ...||.+. | ..+++||+. +...++.+.++ ++..|++ ++| +. .+..++-
T Consensus 34 ~~~~vLDiGcG~G~~----~~~lA~~~--p--~~~v~giD~-s~~~l~~a~~~----~~~~~l~nv~~--~~-~Da~~~l 97 (218)
T 3dxy_A 34 EAPVTLEIGFGMGAS----LVAMAKDR--P--EQDFLGIEV-HSPGVGACLAS----AHEEGLSNLRV--MC-HDAVEVL 97 (218)
T ss_dssp CCCEEEEESCTTCHH----HHHHHHHC--T--TSEEEEECS-CHHHHHHHHHH----HHHTTCSSEEE--EC-SCHHHHH
T ss_pred CCCeEEEEeeeChHH----HHHHHHHC--C--CCeEEEEEe-cHHHHHHHHHH----HHHhCCCcEEE--EE-CCHHHHH
Confidence 455799999998854 34455542 3 378999987 55555555444 4455654 444 32 2332221
Q ss_pred cccccCCCC--ceEEEeeccccCCCCc------hHHHHHHH-HhcCCCEEEEEeec
Q 048129 237 EDKFDLNAG--EAVAVYSPILLSRTRH------PDFLIKML-RKISPCVMVIIEVE 283 (412)
Q Consensus 237 ~~~l~~~~~--E~laVn~~~~L~~~~~------~~~~L~~v-r~L~P~vvvl~E~e 283 (412)
+.. +.++ +.|++|+......... ...+|+.+ +.|+|.-++.+.-+
T Consensus 98 ~~~--~~~~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 98 HKM--IPDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp HHH--SCTTCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred HHH--cCCCChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 111 1222 3455553322210000 12577777 55999998887654
No 117
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=65.34 E-value=34 Score=30.68 Aligned_cols=107 Identities=11% Similarity=0.011 Sum_probs=57.2
Q ss_pred CeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc-EEEEEeecCCCCCCc
Q 048129 158 KRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP-FSFKIVLVTETKDLN 236 (412)
Q Consensus 158 ~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~-Fef~~v~~~~~e~l~ 236 (412)
..=+|+|+|.|.| .+...||.+. | ..++|||+.++...++.+ .+..+-++..|++ .+|.. .+.+++.
T Consensus 24 ~~~~vLDiGCG~G----~~~~~la~~~---~-~~~v~GvD~s~~~ml~~A-~~A~~~~~~~~~~~v~~~~---~d~~~l~ 91 (225)
T 3p2e_A 24 FDRVHIDLGTGDG----RNIYKLAIND---Q-NTFYIGIDPVKENLFDIS-KKIIKKPSKGGLSNVVFVI---AAAESLP 91 (225)
T ss_dssp CSEEEEEETCTTS----HHHHHHHHTC---T-TEEEEEECSCCGGGHHHH-HHHTSCGGGTCCSSEEEEC---CBTTBCC
T ss_pred CCCEEEEEeccCc----HHHHHHHHhC---C-CCEEEEEeCCHHHHHHHH-HHHHHHHHHcCCCCeEEEE---cCHHHhh
Confidence 3457999999988 4566677653 2 388999998434433322 2222333455664 55533 2344552
Q ss_pred cccccCCCCceEEEeecccc------CCCCchHHHHHHH-HhcCCCEEEEEe
Q 048129 237 EDKFDLNAGEAVAVYSPILL------SRTRHPDFLIKML-RKISPCVMVIIE 281 (412)
Q Consensus 237 ~~~l~~~~~E~laVn~~~~L------~~~~~~~~~L~~v-r~L~P~vvvl~E 281 (412)
..+ .|-+..|.+.+.. ..... ..+|+.+ |-|+|.-.+++.
T Consensus 92 -~~~---~d~v~~i~~~~~~~~~~~~~~~~~-~~~l~~~~r~LkpGG~l~i~ 138 (225)
T 3p2e_A 92 -FEL---KNIADSISILFPWGTLLEYVIKPN-RDILSNVADLAKKEAHFEFV 138 (225)
T ss_dssp -GGG---TTCEEEEEEESCCHHHHHHHHTTC-HHHHHHHHTTEEEEEEEEEE
T ss_pred -hhc---cCeEEEEEEeCCCcHHhhhhhcch-HHHHHHHHHhcCCCcEEEEE
Confidence 211 2444444444322 11122 2355554 678999887773
No 118
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=65.19 E-value=27 Score=30.68 Aligned_cols=105 Identities=11% Similarity=0.002 Sum_probs=55.4
Q ss_pred CeeEEEecccC-CccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCCCCc
Q 048129 158 KRIHLIDLAIR-SGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVLVTETKDLN 236 (412)
Q Consensus 158 ~~vHIID~~i~-~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~~~~~e~l~ 236 (412)
+.-.|+|+|.| .|. +...|+.+. ..++|||+. +...++.+.++ ++..|+..+|..-....+..+.
T Consensus 55 ~~~~vLDlG~G~~G~----~~~~la~~~-----~~~v~~vD~-s~~~~~~a~~~----~~~~~~~v~~~~~d~~~~~~~~ 120 (230)
T 3evz_A 55 GGEVALEIGTGHTAM----MALMAEKFF-----NCKVTATEV-DEEFFEYARRN----IERNNSNVRLVKSNGGIIKGVV 120 (230)
T ss_dssp SSCEEEEECCTTTCH----HHHHHHHHH-----CCEEEEEEC-CHHHHHHHHHH----HHHTTCCCEEEECSSCSSTTTC
T ss_pred CCCEEEEcCCCHHHH----HHHHHHHhc-----CCEEEEEEC-CHHHHHHHHHH----HHHhCCCcEEEeCCchhhhhcc
Confidence 34579999999 885 333444442 157999987 55555555544 4455665555443211122221
Q ss_pred cccccCCCCceEEEeeccccCCC-----------------CchHHHHHHH-HhcCCCEEEEEe
Q 048129 237 EDKFDLNAGEAVAVYSPILLSRT-----------------RHPDFLIKML-RKISPCVMVIIE 281 (412)
Q Consensus 237 ~~~l~~~~~E~laVn~~~~L~~~-----------------~~~~~~L~~v-r~L~P~vvvl~E 281 (412)
. ..=+.|+.|-++.-... .....+|+.+ +-|+|.-.+++.
T Consensus 121 ~-----~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 178 (230)
T 3evz_A 121 E-----GTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALY 178 (230)
T ss_dssp C-----SCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred c-----CceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEE
Confidence 1 12256666755533110 0124566655 457887766654
No 119
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=64.96 E-value=75 Score=28.11 Aligned_cols=100 Identities=12% Similarity=0.135 Sum_probs=54.8
Q ss_pred CCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCCCCc
Q 048129 157 AKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVLVTETKDLN 236 (412)
Q Consensus 157 ~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~~~~~e~l~ 236 (412)
.+.-+|+|+|.|.|.- ...|+.+ + .++|||+. +...++.+.+++ +...-.++|... +.+++.
T Consensus 38 ~~~~~vLDiG~G~G~~----~~~l~~~--~----~~v~~vD~-s~~~~~~a~~~~----~~~~~~~~~~~~---d~~~~~ 99 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRI----ALPLIAR--G----YRYIALDA-DAAMLEVFRQKI----AGVDRKVQVVQA---DARAIP 99 (263)
T ss_dssp SSCCEEEEETCTTSTT----HHHHHTT--T----CEEEEEES-CHHHHHHHHHHT----TTSCTTEEEEES---CTTSCC
T ss_pred CCCCEEEEeCCcCCHH----HHHHHHC--C----CEEEEEEC-CHHHHHHHHHHh----hccCCceEEEEc---ccccCC
Confidence 3456899999998864 3345554 2 36999987 555555555443 222334555443 233332
Q ss_pred cccccCCCC--ceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEEe
Q 048129 237 EDKFDLNAG--EAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVIIE 281 (412)
Q Consensus 237 ~~~l~~~~~--E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~E 281 (412)
..++ +.|+.+..+.- .+ ....+|+.+ +.|+|.-.+++.
T Consensus 100 -----~~~~~fD~v~~~~~l~~-~~-~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 100 -----LPDESVHGVIVVHLWHL-VP-DWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp -----SCTTCEEEEEEESCGGG-CT-THHHHHHHHHHHEEEEEEEEEE
T ss_pred -----CCCCCeeEEEECCchhh-cC-CHHHHHHHHHHHCCCCcEEEEE
Confidence 2222 34444433322 22 344566655 778998776665
No 120
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=64.93 E-value=11 Score=35.16 Aligned_cols=109 Identities=4% Similarity=0.037 Sum_probs=57.9
Q ss_pred eeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhc--------CCcEEEEEeecC
Q 048129 159 RIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETW--------NLPFSFKIVLVT 230 (412)
Q Consensus 159 ~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~l--------gv~Fef~~v~~~ 230 (412)
.-+|+|+|.|.|. +...++.+ | .-+||+|+. +...++.+.+++ +.+..+ +-.+++.. .
T Consensus 76 ~~~VLdiG~G~G~----~~~~l~~~---~--~~~v~~vDi-d~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~---~ 141 (281)
T 1mjf_A 76 PKRVLVIGGGDGG----TVREVLQH---D--VDEVIMVEI-DEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTI---G 141 (281)
T ss_dssp CCEEEEEECTTSH----HHHHHTTS---C--CSEEEEEES-CHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEE---S
T ss_pred CCeEEEEcCCcCH----HHHHHHhC---C--CCEEEEEEC-CHHHHHHHHHHH-hhccccccccccCCCCcEEEEE---C
Confidence 3579999999883 55566665 2 268999987 555566666555 332111 11244432 2
Q ss_pred CCCCCccccccCCCCceEEEeeccccCCCCc--hHHHHHHH-HhcCCCEEEEEeecC
Q 048129 231 ETKDLNEDKFDLNAGEAVAVYSPILLSRTRH--PDFLIKML-RKISPCVMVIIEVEA 284 (412)
Q Consensus 231 ~~e~l~~~~l~~~~~E~laVn~~~~L~~~~~--~~~~L~~v-r~L~P~vvvl~E~ea 284 (412)
+..+.-.. -..=+.|+++.......+.. ...+++.+ +.|+|.-++++..+.
T Consensus 142 D~~~~l~~---~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~ 195 (281)
T 1mjf_A 142 DGFEFIKN---NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGS 195 (281)
T ss_dssp CHHHHHHH---CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred chHHHhcc---cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 21111000 01225677766543322222 25566665 778999888887543
No 121
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=64.69 E-value=44 Score=30.32 Aligned_cols=108 Identities=12% Similarity=0.131 Sum_probs=57.4
Q ss_pred CeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCCCCcc
Q 048129 158 KRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVLVTETKDLNE 237 (412)
Q Consensus 158 ~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~~~~~e~l~~ 237 (412)
+.-+|+|+|.|.|.--. .|+.++ ..++|||+. +...++.+.+++ ...|++-..+.+. .+..++..
T Consensus 64 ~~~~vLDiGcG~G~~~~----~l~~~~-----~~~v~gvD~-s~~~~~~a~~~~----~~~~~~~~v~~~~-~d~~~~~~ 128 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLL----KYERAG-----IGEYYGVDI-AEVSINDARVRA----RNMKRRFKVFFRA-QDSYGRHM 128 (298)
T ss_dssp TTCEEEEETCTTTTTHH----HHHHHT-----CSEEEEEES-CHHHHHHHHHHH----HTSCCSSEEEEEE-SCTTTSCC
T ss_pred CCCeEEEECCCCCHHHH----HHHHCC-----CCEEEEEEC-CHHHHHHHHHHH----HhcCCCccEEEEE-CCcccccc
Confidence 44589999999985332 244442 247999987 555565555443 3455533333333 23333311
Q ss_pred ccccCCCCceEEEeecccc--CCCCchHHHHHHH-HhcCCCEEEEEee
Q 048129 238 DKFDLNAGEAVAVYSPILL--SRTRHPDFLIKML-RKISPCVMVIIEV 282 (412)
Q Consensus 238 ~~l~~~~~E~laVn~~~~L--~~~~~~~~~L~~v-r~L~P~vvvl~E~ 282 (412)
. .-..=+.|+.+..+.. ........+|+.+ +.|+|.-.+++..
T Consensus 129 ~--~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (298)
T 1ri5_A 129 D--LGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTV 174 (298)
T ss_dssp C--CSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred C--CCCCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 0 0011145555544432 2334445667665 6789987776643
No 122
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=64.52 E-value=25 Score=30.15 Aligned_cols=101 Identities=13% Similarity=0.149 Sum_probs=53.7
Q ss_pred eeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCCCCccc
Q 048129 159 RIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVLVTETKDLNED 238 (412)
Q Consensus 159 ~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~~~~~e~l~~~ 238 (412)
.-+|+|+|.|.|.-...++ +. ++ .++|||+. +...++.+.+++.+ .+..++|... +..++.
T Consensus 24 ~~~vLDiGcG~G~~~~~~~---~~-~~-----~~v~~vD~-s~~~~~~a~~~~~~----~~~~~~~~~~---d~~~~~-- 84 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIF---VE-DG-----YKTYGIEI-SDLQLKKAENFSRE----NNFKLNISKG---DIRKLP-- 84 (209)
T ss_dssp CSEEEEESCCSSSCTHHHH---HH-TT-----CEEEEEEC-CHHHHHHHHHHHHH----HTCCCCEEEC---CTTSCC--
T ss_pred CCEEEEECCCCCHHHHHHH---Hh-CC-----CEEEEEEC-CHHHHHHHHHHHHh----cCCceEEEEC---chhhCC--
Confidence 4589999999886543333 22 21 47999987 55556665555433 3334444332 233322
Q ss_pred cccCCCC--ceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEEe
Q 048129 239 KFDLNAG--EAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVIIE 281 (412)
Q Consensus 239 ~l~~~~~--E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~E 281 (412)
..++ +.|+.+..+.--.+.....+|+.+ +.|+|.-++++.
T Consensus 85 ---~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 127 (209)
T 2p8j_A 85 ---FKDESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACIN 127 (209)
T ss_dssp ---SCTTCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---CCCCceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 1222 344433222211223455666655 778998776664
No 123
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=63.78 E-value=22 Score=33.88 Aligned_cols=110 Identities=8% Similarity=0.100 Sum_probs=60.6
Q ss_pred eeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHh-c-CCcEEEEEeecCCCCCCc
Q 048129 159 RIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAET-W-NLPFSFKIVLVTETKDLN 236 (412)
Q Consensus 159 ~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~-l-gv~Fef~~v~~~~~e~l~ 236 (412)
.-+|+|+|.|.|. +...|+.++ | .-+||+|+. +...++.+.+++.+.... + +-.++|..- +..+..
T Consensus 78 ~~~VLdiG~G~G~----~~~~l~~~~---~-~~~v~~vDi-d~~~i~~ar~~~~~~~~~~~~~~~v~~~~~---D~~~~l 145 (314)
T 1uir_A 78 PKRVLIVGGGEGA----TLREVLKHP---T-VEKAVMVDI-DGELVEVAKRHMPEWHQGAFDDPRAVLVID---DARAYL 145 (314)
T ss_dssp CCEEEEEECTTSH----HHHHHTTST---T-CCEEEEEES-CHHHHHHHHHHCHHHHTTGGGCTTEEEEES---CHHHHH
T ss_pred CCeEEEEcCCcCH----HHHHHHhcC---C-CCEEEEEEC-CHHHHHHHHHHhHhhccccccCCceEEEEc---hHHHHH
Confidence 3589999999885 456666653 2 368999987 556666666666554322 2 223444332 221110
Q ss_pred cccccCCCCceEEEeeccccC--CC-Cc--hHHHHHHH-HhcCCCEEEEEee
Q 048129 237 EDKFDLNAGEAVAVYSPILLS--RT-RH--PDFLIKML-RKISPCVMVIIEV 282 (412)
Q Consensus 237 ~~~l~~~~~E~laVn~~~~L~--~~-~~--~~~~L~~v-r~L~P~vvvl~E~ 282 (412)
+. .-..=+.|+++...... .+ .. ...+++.+ +.|+|.-++++..
T Consensus 146 ~~--~~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 146 ER--TEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp HH--CCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred Hh--cCCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 00 01122577777544321 11 11 25667666 6789998887753
No 124
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=63.73 E-value=9.3 Score=35.87 Aligned_cols=109 Identities=11% Similarity=-0.013 Sum_probs=57.9
Q ss_pred HHHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEe
Q 048129 148 QAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIV 227 (412)
Q Consensus 148 qaIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v 227 (412)
..|++.+.-...-+|+|+|.|.|. +-..|+.+ | -++|||+. +...++.+.+++.+ ..+...+
T Consensus 35 ~~il~~l~l~~g~~VLDlGcGtG~----~a~~La~~--g----~~V~gvD~-S~~ml~~Ar~~~~~----~~v~~~~--- 96 (261)
T 3iv6_A 35 ENDIFLENIVPGSTVAVIGASTRF----LIEKALER--G----ASVTVFDF-SQRMCDDLAEALAD----RCVTIDL--- 96 (261)
T ss_dssp HHHHHTTTCCTTCEEEEECTTCHH----HHHHHHHT--T----CEEEEEES-CHHHHHHHHHHTSS----SCCEEEE---
T ss_pred HHHHHhcCCCCcCEEEEEeCcchH----HHHHHHhc--C----CEEEEEEC-CHHHHHHHHHHHHh----ccceeee---
Confidence 345566654556689999999886 44566665 2 36999987 55556555544322 1222222
Q ss_pred ecCCCCCCcc---ccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEEe
Q 048129 228 LVTETKDLNE---DKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVIIE 281 (412)
Q Consensus 228 ~~~~~e~l~~---~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~E 281 (412)
+++.. ..+. .+=+.|+.|..+.--.+.....+|+.+ +.| |.-.+++-
T Consensus 97 -----~~~~~~~~~~~~-~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS 147 (261)
T 3iv6_A 97 -----LDITAEIPKELA-GHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRAS 147 (261)
T ss_dssp -----CCTTSCCCGGGT-TCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEE
T ss_pred -----eecccccccccC-CCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEE
Confidence 22222 1111 123566666555432222333455554 556 88776653
No 125
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=63.65 E-value=30 Score=33.40 Aligned_cols=117 Identities=12% Similarity=0.117 Sum_probs=65.5
Q ss_pred CeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhc-CCcEEEEEeecCCCCCCc
Q 048129 158 KRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETW-NLPFSFKIVLVTETKDLN 236 (412)
Q Consensus 158 ~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~l-gv~Fef~~v~~~~~e~l~ 236 (412)
+.-+|+|+|.|.|. +...|+.++ | .-+||+|+. +...++.+.+++.+.+..+ +-.++|..- +..+.-
T Consensus 120 ~~~~VLdIG~G~G~----~a~~la~~~---~-~~~V~~VDi-s~~~l~~Ar~~~~~~~~gl~~~rv~~~~~---D~~~~l 187 (334)
T 1xj5_A 120 NPKKVLVIGGGDGG----VLREVARHA---S-IEQIDMCEI-DKMVVDVSKQFFPDVAIGYEDPRVNLVIG---DGVAFL 187 (334)
T ss_dssp CCCEEEEETCSSSH----HHHHHTTCT---T-CCEEEEEES-CHHHHHHHHHHCHHHHGGGGSTTEEEEES---CHHHHH
T ss_pred CCCEEEEECCCccH----HHHHHHHcC---C-CCEEEEEEC-CHHHHHHHHHHHHhhccccCCCcEEEEEC---CHHHHH
Confidence 34589999999885 456666552 3 378999987 5566777777776654333 123555432 221110
Q ss_pred cccccCCCCceEEEeeccccCCCCc--hHHHHHHH-HhcCCCEEEEEeecCcCC
Q 048129 237 EDKFDLNAGEAVAVYSPILLSRTRH--PDFLIKML-RKISPCVMVIIEVEANHN 287 (412)
Q Consensus 237 ~~~l~~~~~E~laVn~~~~L~~~~~--~~~~L~~v-r~L~P~vvvl~E~ea~~n 287 (412)
+. +.-..=+.|++|+......+.. ...+++.+ +.|+|.-++++..+.-..
T Consensus 188 ~~-~~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~ 240 (334)
T 1xj5_A 188 KN-AAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLWL 240 (334)
T ss_dssp HT-SCTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCTTT
T ss_pred Hh-ccCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCCccc
Confidence 00 0001125667665432211111 24566655 778999999887555443
No 126
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=63.26 E-value=93 Score=28.66 Aligned_cols=133 Identities=11% Similarity=0.076 Sum_probs=66.1
Q ss_pred HHHhcCchhhHHHHHhhHHHHhh----hhcC-CeeEEEecccCC---ccchHHHHHHHHhCCCCCCceEEEEEecCCChH
Q 048129 131 ACYKESSFYQATLFAGTQAIIER----VASA-KRIHLIDLAIRS---GSHCIVLMQALATRQECPVELLKITAVGSSSKQ 202 (412)
Q Consensus 131 ~~~~~sP~~~fa~~taNqaIleA----~~g~-~~vHIID~~i~~---G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~ 202 (412)
.+.+..|-+. .....|+..++. +... ..-+|+|+|.|. |. .. +.++.+ . | ..++|+|+. +..
T Consensus 46 ~~~~~~p~~~-~~a~~~~~~~~~~~~~l~~~~~~~~vLDlGcG~pt~G~-~~---~~~~~~--~-p-~~~v~~vD~-sp~ 115 (274)
T 2qe6_A 46 YACKHIPGLK-ESAIENRKVLVRGVRFLAGEAGISQFLDLGSGLPTVQN-TH---EVAQSV--N-P-DARVVYVDI-DPM 115 (274)
T ss_dssp HHHHHSTTHH-HHHHHHHHHHHHHHHHHHTTTCCCEEEEETCCSCCSSC-HH---HHHHHH--C-T-TCEEEEEES-SHH
T ss_pred HHHHhcchhH-HHHHHHhHHHHHHHHHHhhccCCCEEEEECCCCCCCCh-HH---HHHHHh--C-C-CCEEEEEEC-ChH
Confidence 3444455443 223445554443 2312 234899999998 73 32 333333 2 2 378999997 455
Q ss_pred HHHHHHHHHHHHHHhcCCcEEEEEeecCCCCCCcc--------ccccCCCCceEEEeeccccCCCCchHHHHHHHHh-cC
Q 048129 203 RMEETGKRLAYFAETWNLPFSFKIVLVTETKDLNE--------DKFDLNAGEAVAVYSPILLSRTRHPDFLIKMLRK-IS 273 (412)
Q Consensus 203 ~l~~tg~rL~~fA~~lgv~Fef~~v~~~~~e~l~~--------~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~vr~-L~ 273 (412)
.++.+.+++.. +-..+|..- ++.+... +.+....-.+|+.+..++--.......+|+.+++ |+
T Consensus 116 ~l~~Ar~~~~~-----~~~v~~~~~---D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~ 187 (274)
T 2qe6_A 116 VLTHGRALLAK-----DPNTAVFTA---DVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALA 187 (274)
T ss_dssp HHHHHHHHHTT-----CTTEEEEEC---CTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSC
T ss_pred HHHHHHHhcCC-----CCCeEEEEe---eCCCchhhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCC
Confidence 56666666521 123455443 2322210 1121122234444444433222246678887755 99
Q ss_pred CCEEEEEe
Q 048129 274 PCVMVIIE 281 (412)
Q Consensus 274 P~vvvl~E 281 (412)
|.-.+++.
T Consensus 188 pGG~l~i~ 195 (274)
T 2qe6_A 188 PGSYLFMT 195 (274)
T ss_dssp TTCEEEEE
T ss_pred CCcEEEEE
Confidence 97655543
No 127
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=62.68 E-value=84 Score=31.29 Aligned_cols=95 Identities=20% Similarity=0.296 Sum_probs=58.5
Q ss_pred eEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCCCCcccc
Q 048129 160 IHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVLVTETKDLNEDK 239 (412)
Q Consensus 160 vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~~~~~e~l~~~~ 239 (412)
-.|+|+|.|.|.-- ..||.+ + -+++||+. +...++.+.+++ +..|++.+|.. .+.+++.+.
T Consensus 292 ~~VLDlgcG~G~~s----l~la~~--~----~~V~gvD~-s~~ai~~A~~n~----~~ngl~v~~~~---~d~~~~~~~- 352 (425)
T 2jjq_A 292 EKILDMYSGVGTFG----IYLAKR--G----FNVKGFDS-NEFAIEMARRNV----EINNVDAEFEV---ASDREVSVK- 352 (425)
T ss_dssp SEEEEETCTTTHHH----HHHHHT--T----CEEEEEES-CHHHHHHHHHHH----HHHTCCEEEEE---CCTTTCCCT-
T ss_pred CEEEEeeccchHHH----HHHHHc--C----CEEEEEEC-CHHHHHHHHHHH----HHcCCcEEEEE---CChHHcCcc-
Confidence 47899999988533 345554 2 37999987 556666655543 44566644443 334443222
Q ss_pred ccCCCCceEEEeeccccCCCCchHHHHHHHHhcCCCEEEEEe
Q 048129 240 FDLNAGEAVAVYSPILLSRTRHPDFLIKMLRKISPCVMVIIE 281 (412)
Q Consensus 240 l~~~~~E~laVn~~~~L~~~~~~~~~L~~vr~L~P~vvvl~E 281 (412)
.=+.|++|-+. .+..+.+++.++.|+|.-++.+.
T Consensus 353 ----~fD~Vv~dPPr----~g~~~~~~~~l~~l~p~givyvs 386 (425)
T 2jjq_A 353 ----GFDTVIVDPPR----AGLHPRLVKRLNREKPGVIVYVS 386 (425)
T ss_dssp ----TCSEEEECCCT----TCSCHHHHHHHHHHCCSEEEEEE
T ss_pred ----CCCEEEEcCCc----cchHHHHHHHHHhcCCCcEEEEE
Confidence 22566665432 13345689999999999888874
No 128
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=62.17 E-value=51 Score=28.84 Aligned_cols=108 Identities=10% Similarity=0.111 Sum_probs=57.4
Q ss_pred HHHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEe
Q 048129 148 QAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIV 227 (412)
Q Consensus 148 qaIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v 227 (412)
..|.+.+.....-+|+|+|.|.|. +...|+.+ |+ -++|||+. +...++.+.+++.. -.++|...
T Consensus 33 ~~l~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~--~~---~~v~~vD~-s~~~~~~a~~~~~~------~~~~~~~~ 96 (243)
T 3bkw_A 33 PALRAMLPEVGGLRIVDLGCGFGW----FCRWAHEH--GA---SYVLGLDL-SEKMLARARAAGPD------TGITYERA 96 (243)
T ss_dssp HHHHHHSCCCTTCEEEEETCTTCH----HHHHHHHT--TC---SEEEEEES-CHHHHHHHHHTSCS------SSEEEEEC
T ss_pred HHHHHhccccCCCEEEEEcCcCCH----HHHHHHHC--CC---CeEEEEcC-CHHHHHHHHHhccc------CCceEEEc
Confidence 356666654556689999999885 34556655 22 27999987 44445444433211 12444332
Q ss_pred ecCCCCCCccccccCCCC--ceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEEe
Q 048129 228 LVTETKDLNEDKFDLNAG--EAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVIIE 281 (412)
Q Consensus 228 ~~~~~e~l~~~~l~~~~~--E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~E 281 (412)
+..++. ..++ +.|+.+. .+........+|+.+ +.|+|.-.+++.
T Consensus 97 ---d~~~~~-----~~~~~fD~v~~~~--~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 143 (243)
T 3bkw_A 97 ---DLDKLH-----LPQDSFDLAYSSL--ALHYVEDVARLFRTVHQALSPGGHFVFS 143 (243)
T ss_dssp ---CGGGCC-----CCTTCEEEEEEES--CGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---Chhhcc-----CCCCCceEEEEec--cccccchHHHHHHHHHHhcCcCcEEEEE
Confidence 232222 1222 3444333 332222345566655 678998766653
No 129
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=61.86 E-value=34 Score=34.54 Aligned_cols=119 Identities=11% Similarity=0.075 Sum_probs=63.7
Q ss_pred HHHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHH---HHHHHHHHHhcCCc---
Q 048129 148 QAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEET---GKRLAYFAETWNLP--- 221 (412)
Q Consensus 148 qaIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~t---g~rL~~fA~~lgv~--- 221 (412)
..|++.+.-...-.|+|+|.|.|.+-..|.+.. + ..+++||+. +...++.+ -+.+.+-++.+|+.
T Consensus 232 ~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~------g--~~~V~GVDi-s~~~l~~A~~Ml~~ar~~~~~~Gl~~~n 302 (433)
T 1u2z_A 232 SDVYQQCQLKKGDTFMDLGSGVGNCVVQAALEC------G--CALSFGCEI-MDDASDLTILQYEELKKRCKLYGMRLNN 302 (433)
T ss_dssp HHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHH------C--CSEEEEEEC-CHHHHHHHHHHHHHHHHHHHHTTBCCCC
T ss_pred HHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHC------C--CCEEEEEeC-CHHHHHHHHHhHHHHHHHHHHcCCCCCc
Confidence 346666654555679999999887654444332 1 257999987 44445444 23334445566743
Q ss_pred EEEEEeecCCCCCCccccc--cCCCCceEEEeeccccCCCCchHHHHHHHHhcCCCEEEEEe
Q 048129 222 FSFKIVLVTETKDLNEDKF--DLNAGEAVAVYSPILLSRTRHPDFLIKMLRKISPCVMVIIE 281 (412)
Q Consensus 222 Fef~~v~~~~~e~l~~~~l--~~~~~E~laVn~~~~L~~~~~~~~~L~~vr~L~P~vvvl~E 281 (412)
++|. ..+.+.+ ...+ ...+=++|++|..+ . .+.....+-+..+.|+|.-.+++-
T Consensus 303 V~~i--~gD~~~~--~~~~~~~~~~FDvIvvn~~l-~-~~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 303 VEFS--LKKSFVD--NNRVAELIPQCDVILVNNFL-F-DEDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp EEEE--ESSCSTT--CHHHHHHGGGCSEEEECCTT-C-CHHHHHHHHHHHTTCCTTCEEEES
T ss_pred eEEE--EcCcccc--ccccccccCCCCEEEEeCcc-c-cccHHHHHHHHHHhCCCCeEEEEe
Confidence 4443 2222211 0001 01223577776544 1 222223344556889998777764
No 130
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=61.41 E-value=32 Score=30.54 Aligned_cols=114 Identities=10% Similarity=0.121 Sum_probs=58.9
Q ss_pred hhHHHHhhhhcC-----CeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCC
Q 048129 146 GTQAIIERVASA-----KRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNL 220 (412)
Q Consensus 146 aNqaIleA~~g~-----~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv 220 (412)
....+++.+... +.-.|+|+|.|.|. +...|+.+. ..++|+|+. +...++.+.+++...- +.
T Consensus 62 ~~~~~~~~l~~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~-----~~~v~~vD~-s~~~~~~a~~~~~~~~---~~ 128 (241)
T 2ex4_A 62 SSRKFLQRFLREGPNKTGTSCALDCGAGIGR----ITKRLLLPL-----FREVDMVDI-TEDFLVQAKTYLGEEG---KR 128 (241)
T ss_dssp HHHHHHHGGGC----CCCCSEEEEETCTTTH----HHHHTTTTT-----CSEEEEEES-CHHHHHHHHHHTGGGG---GG
T ss_pred hHHHHHHHHHHhcccCCCCCEEEEECCCCCH----HHHHHHHhc-----CCEEEEEeC-CHHHHHHHHHHhhhcC---Cc
Confidence 344455554321 35789999999885 344555542 147999987 5555655554433211 22
Q ss_pred cEEEEEeecCCCCCCccccccCCCC--ceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEE
Q 048129 221 PFSFKIVLVTETKDLNEDKFDLNAG--EAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVII 280 (412)
Q Consensus 221 ~Fef~~v~~~~~e~l~~~~l~~~~~--E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~ 280 (412)
..+|... ++.++.. .++ +.|+.+..+.--....+..+|+.+ +.|+|.-.+++
T Consensus 129 ~~~~~~~---d~~~~~~-----~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i 183 (241)
T 2ex4_A 129 VRNYFCC---GLQDFTP-----EPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVI 183 (241)
T ss_dssp EEEEEEC---CGGGCCC-----CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred eEEEEEc---ChhhcCC-----CCCCEEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 3444332 2333321 122 444444333221112244566665 67899876665
No 131
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=60.93 E-value=92 Score=27.79 Aligned_cols=48 Identities=21% Similarity=0.239 Sum_probs=32.8
Q ss_pred CeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHH
Q 048129 158 KRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYF 214 (412)
Q Consensus 158 ~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~f 214 (412)
+.-.|+|+|.|.|. +...||.+ +| ..++|||+. +...++.+.+++...
T Consensus 49 ~~~~vLDiGcG~G~----~~~~la~~--~~--~~~v~gvD~-s~~~l~~a~~~~~~~ 96 (246)
T 2vdv_E 49 KKVTIADIGCGFGG----LMIDLSPA--FP--EDLILGMEI-RVQVTNYVEDRIIAL 96 (246)
T ss_dssp CCEEEEEETCTTSH----HHHHHHHH--ST--TSEEEEEES-CHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCH----HHHHHHHh--CC--CCCEEEEEc-CHHHHHHHHHHHHHH
Confidence 45689999999886 33445554 23 378999997 556677676666554
No 132
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=60.82 E-value=20 Score=31.93 Aligned_cols=105 Identities=15% Similarity=0.191 Sum_probs=56.9
Q ss_pred eeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCCCCccc
Q 048129 159 RIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVLVTETKDLNED 238 (412)
Q Consensus 159 ~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~~~~~e~l~~~ 238 (412)
.-.|+|+|.|.|. +...|+.+ ++ ++|||+. +...++.+.+++ . .-..+|... ++.++...
T Consensus 57 ~~~vLD~GcG~G~----~~~~la~~--~~----~v~gvD~-s~~~~~~a~~~~----~--~~~~~~~~~---d~~~~~~~ 116 (245)
T 3ggd_A 57 ELPLIDFACGNGT----QTKFLSQF--FP----RVIGLDV-SKSALEIAAKEN----T--AANISYRLL---DGLVPEQA 116 (245)
T ss_dssp TSCEEEETCTTSH----HHHHHHHH--SS----CEEEEES-CHHHHHHHHHHS----C--CTTEEEEEC---CTTCHHHH
T ss_pred CCeEEEEcCCCCH----HHHHHHHh--CC----CEEEEEC-CHHHHHHHHHhC----c--ccCceEEEC---cccccccc
Confidence 3569999999884 44555554 32 6999987 545555555443 1 113444433 33333221
Q ss_pred c-cc-CCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEE-EEEeec
Q 048129 239 K-FD-LNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVM-VIIEVE 283 (412)
Q Consensus 239 ~-l~-~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vv-vl~E~e 283 (412)
. +. -.+.+.|+.+..+..-.+.....+|+.+ +.|+|.-. ++++..
T Consensus 117 ~~~~~~~~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 165 (245)
T 3ggd_A 117 AQIHSEIGDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELG 165 (245)
T ss_dssp HHHHHHHCSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred cccccccCccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 1 10 0123455555555544444556677765 67899765 555653
No 133
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=60.31 E-value=99 Score=29.82 Aligned_cols=97 Identities=10% Similarity=0.009 Sum_probs=54.4
Q ss_pred eeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCCC-Ccc
Q 048129 159 RIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVLVTETKD-LNE 237 (412)
Q Consensus 159 ~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~~~~~e~-l~~ 237 (412)
.-.|+|+| |.|.- ...|+.+ +| ..++|+|+. +...++.+.+++ +..|+. ..+.+. .+..+ +..
T Consensus 173 ~~~VLDlG-G~G~~----~~~la~~--~~--~~~v~~vDi-~~~~l~~a~~~~----~~~g~~-~v~~~~-~D~~~~l~~ 236 (373)
T 2qm3_A 173 NKDIFVLG-DDDLT----SIALMLS--GL--PKRIAVLDI-DERLTKFIEKAA----NEIGYE-DIEIFT-FDLRKPLPD 236 (373)
T ss_dssp TCEEEEES-CTTCH----HHHHHHH--TC--CSEEEEECS-CHHHHHHHHHHH----HHHTCC-CEEEEC-CCTTSCCCT
T ss_pred CCEEEEEC-CCCHH----HHHHHHh--CC--CCEEEEEEC-CHHHHHHHHHHH----HHcCCC-CEEEEE-Chhhhhchh
Confidence 45799999 87752 2234443 33 268999986 555666665554 344663 333343 33433 321
Q ss_pred ccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCE
Q 048129 238 DKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCV 276 (412)
Q Consensus 238 ~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~v 276 (412)
. + -..=+.|++|.++... ....+|+.+ +.|+|.-
T Consensus 237 ~-~-~~~fD~Vi~~~p~~~~---~~~~~l~~~~~~LkpgG 271 (373)
T 2qm3_A 237 Y-A-LHKFDTFITDPPETLE---AIRAFVGRGIATLKGPR 271 (373)
T ss_dssp T-T-SSCBSEEEECCCSSHH---HHHHHHHHHHHTBCSTT
T ss_pred h-c-cCCccEEEECCCCchH---HHHHHHHHHHHHcccCC
Confidence 0 0 0122688888776542 135666655 7789954
No 134
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=59.18 E-value=51 Score=30.12 Aligned_cols=105 Identities=11% Similarity=0.133 Sum_probs=57.4
Q ss_pred CCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc-EEEEEeecCCCCCC
Q 048129 157 AKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP-FSFKIVLVTETKDL 235 (412)
Q Consensus 157 ~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~-Fef~~v~~~~~e~l 235 (412)
.+.-+|+|+|.|.|.- ...|+.+. | ..++|+++. +...++.+.++. +..|++ .+| +. .++.+.
T Consensus 108 ~~~~~vLDlG~GsG~~----~~~la~~~---~-~~~v~~vD~-s~~~l~~a~~n~----~~~~~~~v~~--~~-~d~~~~ 171 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAI----ALALASER---P-DCEIIAVDR-MPDAVSLAQRNA----QHLAIKNIHI--LQ-SDWFSA 171 (276)
T ss_dssp SSCCEEEEETCTTSHH----HHHHHHHC---T-TSEEEEECS-SHHHHHHHHHHH----HHHTCCSEEE--EC-CSTTGG
T ss_pred cCCCEEEEecCCccHH----HHHHHHhC---C-CCEEEEEEC-CHHHHHHHHHHH----HHcCCCceEE--EE-cchhhh
Confidence 3456899999998863 33444332 2 268999987 555566555554 344664 444 32 233221
Q ss_pred ccccccCCCCceEEEeeccccC------------CC-----------CchHHHHHHH-HhcCCCEEEEEe
Q 048129 236 NEDKFDLNAGEAVAVYSPILLS------------RT-----------RHPDFLIKML-RKISPCVMVIIE 281 (412)
Q Consensus 236 ~~~~l~~~~~E~laVn~~~~L~------------~~-----------~~~~~~L~~v-r~L~P~vvvl~E 281 (412)
+.-..=+.|+.|-++.-. .| .....+++.+ +.|+|.-.+++|
T Consensus 172 ----~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~ 237 (276)
T 2b3t_A 172 ----LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLE 237 (276)
T ss_dssp ----GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred ----cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 111122567767444220 11 1234566655 567998888877
No 135
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=59.01 E-value=20 Score=30.17 Aligned_cols=109 Identities=12% Similarity=0.097 Sum_probs=59.4
Q ss_pred eeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc--EEEEEeecCCCCCCc
Q 048129 159 RIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP--FSFKIVLVTETKDLN 236 (412)
Q Consensus 159 ~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~--Fef~~v~~~~~e~l~ 236 (412)
.-+|+|+|.|.|.-- ..++.++ .-++|||+. +...++.+.+++. ..|++ .+|..- +..+..
T Consensus 45 ~~~vLD~GcG~G~~~----~~~~~~~-----~~~v~~vD~-~~~~~~~a~~~~~----~~~~~~~~~~~~~---d~~~~~ 107 (187)
T 2fhp_A 45 GGMALDLYSGSGGLA----IEAVSRG-----MDKSICIEK-NFAALKVIKENIA----ITKEPEKFEVRKM---DANRAL 107 (187)
T ss_dssp SCEEEETTCTTCHHH----HHHHHTT-----CSEEEEEES-CHHHHHHHHHHHH----HHTCGGGEEEEES---CHHHHH
T ss_pred CCCEEEeCCccCHHH----HHHHHcC-----CCEEEEEEC-CHHHHHHHHHHHH----HhCCCcceEEEEC---cHHHHH
Confidence 448999999988632 2244442 257999987 5555655555443 33543 555432 222211
Q ss_pred ccc-ccCCCCceEEEeeccccCCCCchHHHHHHH---HhcCCCEEEEEeecCcCC
Q 048129 237 EDK-FDLNAGEAVAVYSPILLSRTRHPDFLIKML---RKISPCVMVIIEVEANHN 287 (412)
Q Consensus 237 ~~~-l~~~~~E~laVn~~~~L~~~~~~~~~L~~v---r~L~P~vvvl~E~ea~~n 287 (412)
+.. ..-..=+.|+.|.++.. ...+.+++.+ +-|+|.-+++++......
T Consensus 108 ~~~~~~~~~fD~i~~~~~~~~---~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~ 159 (187)
T 2fhp_A 108 EQFYEEKLQFDLVLLDPPYAK---QEIVSQLEKMLERQLLTNEAVIVCETDKTVK 159 (187)
T ss_dssp HHHHHTTCCEEEEEECCCGGG---CCHHHHHHHHHHTTCEEEEEEEEEEEETTCC
T ss_pred HHHHhcCCCCCEEEECCCCCc---hhHHHHHHHHHHhcccCCCCEEEEEeCCccc
Confidence 100 00111256666666542 2344555655 558999888887665544
No 136
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=58.21 E-value=76 Score=31.10 Aligned_cols=105 Identities=11% Similarity=0.114 Sum_probs=62.7
Q ss_pred CeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCCCCcc
Q 048129 158 KRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVLVTETKDLNE 237 (412)
Q Consensus 158 ~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~~~~~e~l~~ 237 (412)
+.-+|+|+|.|.|.- ...|+.+ | .++|+|+. +...++.+.+++ +..|+..+|..- +..+...
T Consensus 233 ~~~~VLDlGcG~G~~----~~~la~~--g----~~V~gvDi-s~~al~~A~~n~----~~~~~~v~~~~~---D~~~~~~ 294 (381)
T 3dmg_A 233 RGRQVLDLGAGYGAL----TLPLARM--G----AEVVGVED-DLASVLSLQKGL----EANALKAQALHS---DVDEALT 294 (381)
T ss_dssp TTCEEEEETCTTSTT----HHHHHHT--T----CEEEEEES-BHHHHHHHHHHH----HHTTCCCEEEEC---STTTTSC
T ss_pred CCCEEEEEeeeCCHH----HHHHHHc--C----CEEEEEEC-CHHHHHHHHHHH----HHcCCCeEEEEc---chhhccc
Confidence 456899999999853 3444555 2 37999987 555566555544 445666555443 3333222
Q ss_pred ccccCCCCceEEEeecccc---CCCCchHHHHHH-HHhcCCCEEEEEeec
Q 048129 238 DKFDLNAGEAVAVYSPILL---SRTRHPDFLIKM-LRKISPCVMVIIEVE 283 (412)
Q Consensus 238 ~~l~~~~~E~laVn~~~~L---~~~~~~~~~L~~-vr~L~P~vvvl~E~e 283 (412)
+ -..=+.|+.|.++.. ........+++. .+.|+|.-.+++..+
T Consensus 295 ~---~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n 341 (381)
T 3dmg_A 295 E---EARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSN 341 (381)
T ss_dssp T---TCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred c---CCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEc
Confidence 1 112267778877765 122334456654 477899988887643
No 137
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=57.01 E-value=97 Score=26.85 Aligned_cols=23 Identities=9% Similarity=0.234 Sum_probs=18.4
Q ss_pred ccchhHHHHHHHhCCCeeecCCc
Q 048129 347 HMKIDAWRKFFHRFGMVEAELST 369 (412)
Q Consensus 347 ~e~~~~W~~r~~~aGF~~~~ls~ 369 (412)
.-+.+.|...++.+||+.+....
T Consensus 165 ~~~~~~l~~~l~~~Gf~~~~~~~ 187 (219)
T 1vlm_A 165 FFSTEELMDLMRKAGFEEFKVVQ 187 (219)
T ss_dssp CCCHHHHHHHHHHTTCEEEEEEE
T ss_pred cCCHHHHHHHHHHCCCeEEEEec
Confidence 34668899999999999877653
No 138
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=56.68 E-value=19 Score=35.22 Aligned_cols=108 Identities=7% Similarity=0.109 Sum_probs=58.0
Q ss_pred HHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEee
Q 048129 149 AIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVL 228 (412)
Q Consensus 149 aIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~ 228 (412)
.|++.+.-...-.|+|+|.|.|. ++..|+.+ | .++|||+. +...+ +.|+..|++..-..+
T Consensus 98 ~l~~~~~~~~~~~VLDiGcG~G~----~~~~l~~~--g----~~v~gvD~-s~~~~--------~~a~~~~~~~~~~~~- 157 (416)
T 4e2x_A 98 DFLATELTGPDPFIVEIGCNDGI----MLRTIQEA--G----VRHLGFEP-SSGVA--------AKAREKGIRVRTDFF- 157 (416)
T ss_dssp HHHHTTTCSSSCEEEEETCTTTT----THHHHHHT--T----CEEEEECC-CHHHH--------HHHHTTTCCEECSCC-
T ss_pred HHHHHhCCCCCCEEEEecCCCCH----HHHHHHHc--C----CcEEEECC-CHHHH--------HHHHHcCCCcceeee-
Confidence 44555554456789999999997 56666665 2 37999987 43333 345555665431111
Q ss_pred cCCCCCCccccccCCCC--ceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEEee
Q 048129 229 VTETKDLNEDKFDLNAG--EAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVIIEV 282 (412)
Q Consensus 229 ~~~~e~l~~~~l~~~~~--E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~E~ 282 (412)
..-....+...++ +.|+.+ ..|..-.....+|+.+ +.|+|.-+++++.
T Consensus 158 ----~~~~~~~l~~~~~~fD~I~~~--~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~ 208 (416)
T 4e2x_A 158 ----EKATADDVRRTEGPANVIYAA--NTLCHIPYVQSVLEGVDALLAPDGVFVFED 208 (416)
T ss_dssp ----SHHHHHHHHHHHCCEEEEEEE--SCGGGCTTHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ----chhhHhhcccCCCCEEEEEEC--ChHHhcCCHHHHHHHHHHHcCCCeEEEEEe
Confidence 1001111111122 333333 3331112455666666 6789987777753
No 139
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=56.54 E-value=14 Score=35.47 Aligned_cols=134 Identities=7% Similarity=0.040 Sum_probs=66.2
Q ss_pred eeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhc-CCcEEEEEeecCCCCCCcc
Q 048129 159 RIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETW-NLPFSFKIVLVTETKDLNE 237 (412)
Q Consensus 159 ~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~l-gv~Fef~~v~~~~~e~l~~ 237 (412)
.-+|+|+|.|.|. +...|+.++ | .-+||+|+. +...++.+.+++.+.+..+ +-.+++.. .+..+.-.
T Consensus 109 ~~~VLdIG~G~G~----~~~~l~~~~---~-~~~v~~vDi-d~~~i~~Ar~~~~~~~~~~~~~rv~~~~---~D~~~~l~ 176 (314)
T 2b2c_A 109 PKRVLIIGGGDGG----ILREVLKHE---S-VEKVTMCEI-DEMVIDVAKKFLPGMSCGFSHPKLDLFC---GDGFEFLK 176 (314)
T ss_dssp CCEEEEESCTTSH----HHHHHTTCT---T-CCEEEEECS-CHHHHHHHHHHCTTTSGGGGCTTEEEEC---SCHHHHHH
T ss_pred CCEEEEEcCCcCH----HHHHHHHcC---C-CCEEEEEEC-CHHHHHHHHHHHHHhccccCCCCEEEEE---ChHHHHHH
Confidence 3589999999885 445566552 3 378999987 5555665655543322112 11234332 22211100
Q ss_pred ccccCCCCceEEEeeccccCCCCch--HHHHHHH-HhcCCCEEEEEeecCcCCCCchHHHHHHHHHHHHHHHHHh
Q 048129 238 DKFDLNAGEAVAVYSPILLSRTRHP--DFLIKML-RKISPCVMVIIEVEANHNSQNFEDRFFEVLFHYSASFDCL 309 (412)
Q Consensus 238 ~~l~~~~~E~laVn~~~~L~~~~~~--~~~L~~v-r~L~P~vvvl~E~ea~~n~~~F~~RF~eaL~~YsalFdsL 309 (412)
. .-..=+.|++|.......+..+ ..+++.+ +.|+|.-+++++.+.-.. -.+.+.....+...+|...
T Consensus 177 ~--~~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~~---~~~~~~~~~~~l~~vF~~v 246 (314)
T 2b2c_A 177 N--HKNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGESVWL---HLPLIAHLVAFNRKIFPAV 246 (314)
T ss_dssp H--CTTCEEEEEECCC-------------HHHHHHHHEEEEEEEEEECCCTTT---CHHHHHHHHHHHHHHCSEE
T ss_pred h--cCCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCCccc---CHHHHHHHHHHHHHHCCcc
Confidence 0 0112256777664333211111 4566655 778999988887532221 1334555555556666543
No 140
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=55.66 E-value=26 Score=30.20 Aligned_cols=68 Identities=18% Similarity=0.146 Sum_probs=40.6
Q ss_pred HhhHHHHhhhh--cCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc-
Q 048129 145 AGTQAIIERVA--SAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP- 221 (412)
Q Consensus 145 taNqaIleA~~--g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~- 221 (412)
...+.+++.+. -.+.-.|+|+|.|.|. +...|+.++ ..++|||+. +...++.+.++ ++..|++
T Consensus 45 ~~~~~~~~~l~~~~~~~~~vLDiG~G~G~----~~~~l~~~~-----~~~v~~vD~-s~~~~~~a~~~----~~~~~~~~ 110 (205)
T 3grz_A 45 QTTQLAMLGIERAMVKPLTVADVGTGSGI----LAIAAHKLG-----AKSVLATDI-SDESMTAAEEN----AALNGIYD 110 (205)
T ss_dssp HHHHHHHHHHHHHCSSCCEEEEETCTTSH----HHHHHHHTT-----CSEEEEEES-CHHHHHHHHHH----HHHTTCCC
T ss_pred ccHHHHHHHHHHhccCCCEEEEECCCCCH----HHHHHHHCC-----CCEEEEEEC-CHHHHHHHHHH----HHHcCCCc
Confidence 34455555554 2345689999999883 334466552 258999987 54555554444 3445655
Q ss_pred EEEEE
Q 048129 222 FSFKI 226 (412)
Q Consensus 222 Fef~~ 226 (412)
++|..
T Consensus 111 v~~~~ 115 (205)
T 3grz_A 111 IALQK 115 (205)
T ss_dssp CEEEE
T ss_pred eEEEe
Confidence 55544
No 141
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=55.52 E-value=32 Score=29.59 Aligned_cols=89 Identities=12% Similarity=0.104 Sum_probs=47.1
Q ss_pred CeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCCCCcc
Q 048129 158 KRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVLVTETKDLNE 237 (412)
Q Consensus 158 ~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~~~~~e~l~~ 237 (412)
+.-+|+|+|.|.|. +...|+.+ | .-++|||+. +...++.+.+++. + .+|.. .+..++.
T Consensus 51 ~~~~vlD~gcG~G~----~~~~l~~~--~---~~~v~~vD~-~~~~~~~a~~~~~------~--~~~~~---~d~~~~~- 108 (200)
T 1ne2_A 51 GGRSVIDAGTGNGI----LACGSYLL--G---AESVTAFDI-DPDAIETAKRNCG------G--VNFMV---ADVSEIS- 108 (200)
T ss_dssp BTSEEEEETCTTCH----HHHHHHHT--T---BSEEEEEES-CHHHHHHHHHHCT------T--SEEEE---CCGGGCC-
T ss_pred CCCEEEEEeCCccH----HHHHHHHc--C---CCEEEEEEC-CHHHHHHHHHhcC------C--CEEEE---CcHHHCC-
Confidence 34579999999887 44456655 2 247999987 5455555554432 3 33332 2333332
Q ss_pred ccccCCCCceEEEeeccccCCCCchHHHHHHHHhcC
Q 048129 238 DKFDLNAGEAVAVYSPILLSRTRHPDFLIKMLRKIS 273 (412)
Q Consensus 238 ~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~vr~L~ 273 (412)
..=+.|+.|.++..........+++.+.++-
T Consensus 109 -----~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 109 -----GKYDTWIMNPPFGSVVKHSDRAFIDKAFETS 139 (200)
T ss_dssp -----CCEEEEEECCCC-------CHHHHHHHHHHE
T ss_pred -----CCeeEEEECCCchhccCchhHHHHHHHHHhc
Confidence 1226778887776632232335666665444
No 142
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=54.95 E-value=40 Score=30.96 Aligned_cols=44 Identities=20% Similarity=0.179 Sum_probs=29.1
Q ss_pred CeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHH
Q 048129 158 KRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRL 211 (412)
Q Consensus 158 ~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL 211 (412)
+.-+|+|+|.|.|. +..+ +.+.++ -+||||+. +...++.+.+++
T Consensus 71 ~~~~vLDiGcG~G~-~~~l----~~~~~~----~~v~gvD~-s~~~l~~a~~~~ 114 (289)
T 2g72_A 71 SGRTLIDIGSGPTV-YQLL----SACSHF----EDITMTDF-LEVNRQELGRWL 114 (289)
T ss_dssp CCSEEEEETCTTCC-GGGT----TGGGGC----SEEEEECS-CHHHHHHHHHHH
T ss_pred CCCeEEEECCCcCh-HHHH----hhccCC----CeEEEeCC-CHHHHHHHHHHH
Confidence 45689999999998 5432 222211 47999987 556666666654
No 143
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=53.25 E-value=26 Score=31.56 Aligned_cols=55 Identities=24% Similarity=0.283 Sum_probs=34.7
Q ss_pred HhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHH
Q 048129 151 IERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLA 212 (412)
Q Consensus 151 leA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~ 212 (412)
++.+.+.+...|+|+|.|.|. +.-.|+.+-.. | ..+||||+. +...++.+.+++.
T Consensus 44 l~~~~~~~~~~vLD~gcGsG~----~~~~la~~~~~-~-~~~v~gvDi-s~~~l~~A~~~~~ 98 (250)
T 1o9g_A 44 LARLPGDGPVTLWDPCCGSGY----LLTVLGLLHRR-S-LRQVIASDV-DPAPLELAAKNLA 98 (250)
T ss_dssp HHTSSCCSCEEEEETTCTTSH----HHHHHHHHTGG-G-EEEEEEEES-CHHHHHHHHHHHH
T ss_pred HHhcccCCCCeEEECCCCCCH----HHHHHHHHhcc-C-CCeEEEEEC-CHHHHHHHHHHHH
Confidence 344444567899999999994 44444443111 2 378999987 5566666665543
No 144
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=52.98 E-value=18 Score=33.82 Aligned_cols=56 Identities=9% Similarity=0.206 Sum_probs=34.3
Q ss_pred HHhhhhcC--CeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHH
Q 048129 150 IIERVASA--KRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYF 214 (412)
Q Consensus 150 IleA~~g~--~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~f 214 (412)
+++.+... +.-.|+|+|.|.| .+...|+.+- |+ .+||||+. +...++.+.+++...
T Consensus 36 ~l~~l~~~~~~~~~VLDiGCG~G----~~~~~la~~~--~~--~~v~gvDi-s~~~i~~A~~~~~~~ 93 (292)
T 3g07_A 36 RLRVLKPEWFRGRDVLDLGCNVG----HLTLSIACKW--GP--SRMVGLDI-DSRLIHSARQNIRHY 93 (292)
T ss_dssp GGGTSCGGGTTTSEEEEESCTTC----HHHHHHHHHT--CC--SEEEEEES-CHHHHHHHHHTC---
T ss_pred HHHhhhhhhcCCCcEEEeCCCCC----HHHHHHHHHc--CC--CEEEEECC-CHHHHHHHHHHHHhh
Confidence 44444333 4568999999998 3445556553 21 58999997 556677666665543
No 145
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=52.11 E-value=90 Score=28.46 Aligned_cols=40 Identities=15% Similarity=0.093 Sum_probs=27.9
Q ss_pred CCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHH
Q 048129 157 AKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEET 207 (412)
Q Consensus 157 ~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~t 207 (412)
.+.-.|+|+|.|.|.- ...||.+ | .++|||+. +...++.+
T Consensus 67 ~~~~~vLD~GCG~G~~----~~~La~~--G----~~V~gvD~-S~~~i~~a 106 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIE----MKWFADR--G----HTVVGVEI-SEIGIREF 106 (252)
T ss_dssp CCSCEEEETTCTTCTH----HHHHHHT--T----CEEEEECS-CHHHHHHH
T ss_pred CCCCeEEEeCCCCcHH----HHHHHHC--C----CeEEEEEC-CHHHHHHH
Confidence 3556899999998853 4567766 3 37999987 55555544
No 146
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=50.81 E-value=59 Score=29.62 Aligned_cols=123 Identities=11% Similarity=0.034 Sum_probs=64.7
Q ss_pred HHHHhhhh-cCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc--EEE
Q 048129 148 QAIIERVA-SAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP--FSF 224 (412)
Q Consensus 148 qaIleA~~-g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~--Fef 224 (412)
..+|.++. -.+.-+|+|+|.|.|. +...|+.+. | ..+||||+. +...++.+.+++...+. .|++ ++|
T Consensus 25 ~~lL~~~~~~~~~~~VLDlG~G~G~----~~l~la~~~--~--~~~v~gvDi-~~~~~~~a~~n~~~~~~-~~l~~~v~~ 94 (260)
T 2ozv_A 25 AMLLASLVADDRACRIADLGAGAGA----AGMAVAARL--E--KAEVTLYER-SQEMAEFARRSLELPDN-AAFSARIEV 94 (260)
T ss_dssp HHHHHHTCCCCSCEEEEECCSSSSH----HHHHHHHHC--T--TEEEEEEES-SHHHHHHHHHHTTSGGG-TTTGGGEEE
T ss_pred HHHHHHHhcccCCCEEEEeCChHhH----HHHHHHHhC--C--CCeEEEEEC-CHHHHHHHHHHHHhhhh-CCCcceEEE
Confidence 33444433 3345689999999885 334455552 2 389999987 44555555544322110 4554 444
Q ss_pred EEeecCCCCCCccc----cccCCCCceEEEeeccccC----------------CCCchHHHHHHH-HhcCCCEEEEEeec
Q 048129 225 KIVLVTETKDLNED----KFDLNAGEAVAVYSPILLS----------------RTRHPDFLIKML-RKISPCVMVIIEVE 283 (412)
Q Consensus 225 ~~v~~~~~e~l~~~----~l~~~~~E~laVn~~~~L~----------------~~~~~~~~L~~v-r~L~P~vvvl~E~e 283 (412)
.. .++.++... .+.-..=+.|+.|-++... .....+.+++.+ +-|+|.-.++++..
T Consensus 95 ~~---~D~~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 95 LE---ADVTLRAKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp EE---CCTTCCHHHHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred Ee---CCHHHHhhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 33 234333111 1111122677777555431 122356677765 67899987777643
No 147
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=49.59 E-value=33 Score=32.17 Aligned_cols=85 Identities=16% Similarity=0.241 Sum_probs=48.7
Q ss_pred HHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEee
Q 048129 149 AIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVL 228 (412)
Q Consensus 149 aIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~ 228 (412)
.|++++.-... +|+|+|.|.|. |-..|+.+. -++|+|+. +...++.+.+++. +-.+ +.+.
T Consensus 38 ~Iv~~~~~~~~-~VLEIG~G~G~----lt~~L~~~~------~~V~avEi-d~~~~~~l~~~~~------~~~v--~vi~ 97 (271)
T 3fut_A 38 RIVEAARPFTG-PVFEVGPGLGA----LTRALLEAG------AEVTAIEK-DLRLRPVLEETLS------GLPV--RLVF 97 (271)
T ss_dssp HHHHHHCCCCS-CEEEECCTTSH----HHHHHHHTT------CCEEEEES-CGGGHHHHHHHTT------TSSE--EEEE
T ss_pred HHHHhcCCCCC-eEEEEeCchHH----HHHHHHHcC------CEEEEEEC-CHHHHHHHHHhcC------CCCE--EEEE
Confidence 45555554556 99999999885 667777763 25899987 4444554444432 1233 3343
Q ss_pred cCCCCCCccccccCCCCceEEEeecccc
Q 048129 229 VTETKDLNEDKFDLNAGEAVAVYSPILL 256 (412)
Q Consensus 229 ~~~~e~l~~~~l~~~~~E~laVn~~~~L 256 (412)
.+..+++.+.+ .....|+-|.++..
T Consensus 98 -~D~l~~~~~~~--~~~~~iv~NlPy~i 122 (271)
T 3fut_A 98 -QDALLYPWEEV--PQGSLLVANLPYHI 122 (271)
T ss_dssp -SCGGGSCGGGS--CTTEEEEEEECSSC
T ss_pred -CChhhCChhhc--cCccEEEecCcccc
Confidence 33333333221 13456777887765
No 148
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=49.34 E-value=64 Score=28.69 Aligned_cols=108 Identities=7% Similarity=0.112 Sum_probs=58.2
Q ss_pred HHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc--EEEEE
Q 048129 149 AIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP--FSFKI 226 (412)
Q Consensus 149 aIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~--Fef~~ 226 (412)
.|++.+.-...-+|+|+|.|.|.--..|.+.+ +| ..++|+++. +...++.+.+++.+ .|++ .+|..
T Consensus 84 ~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~-----~~--~~~v~~~D~-~~~~~~~a~~~~~~----~~~~~~v~~~~ 151 (255)
T 3mb5_A 84 LIVAYAGISPGDFIVEAGVGSGALTLFLANIV-----GP--EGRVVSYEI-REDFAKLAWENIKW----AGFDDRVTIKL 151 (255)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHH-----CT--TSEEEEECS-CHHHHHHHHHHHHH----HTCTTTEEEEC
T ss_pred HHHHhhCCCCCCEEEEecCCchHHHHHHHHHh-----CC--CeEEEEEec-CHHHHHHHHHHHHH----cCCCCceEEEE
Confidence 45555554556689999999885443333333 22 368999987 55556666555443 3554 44433
Q ss_pred eecCCCCCCccccccCCCCceEEEeeccccCCCCchHHHHHHHHhcCCCEEEEEe
Q 048129 227 VLVTETKDLNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKMLRKISPCVMVIIE 281 (412)
Q Consensus 227 v~~~~~e~l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~vr~L~P~vvvl~E 281 (412)
- +..+. +.-..=+.|+.| .+.+...+-+..+.|+|.-.+++.
T Consensus 152 ~---d~~~~----~~~~~~D~v~~~------~~~~~~~l~~~~~~L~~gG~l~~~ 193 (255)
T 3mb5_A 152 K---DIYEG----IEEENVDHVILD------LPQPERVVEHAAKALKPGGFFVAY 193 (255)
T ss_dssp S---CGGGC----CCCCSEEEEEEC------SSCGGGGHHHHHHHEEEEEEEEEE
T ss_pred C---chhhc----cCCCCcCEEEEC------CCCHHHHHHHHHHHcCCCCEEEEE
Confidence 2 22211 111111334332 234433444455779998877764
No 149
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=47.38 E-value=1.5e+02 Score=26.92 Aligned_cols=111 Identities=15% Similarity=0.123 Sum_probs=58.5
Q ss_pred HHHhhhh---cCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhc-CCcEEE
Q 048129 149 AIIERVA---SAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETW-NLPFSF 224 (412)
Q Consensus 149 aIleA~~---g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~l-gv~Fef 224 (412)
+|+++++ =...=+|+|+|.+.|. |...+-.+. || .=+|+||+. +...+ +.|.+.|+.. |+ ++
T Consensus 64 ~ll~~l~~~~l~~g~~VLDlG~GtG~-~t~~la~~v----~~--~G~V~avD~-s~~~l----~~l~~~a~~r~nv--~~ 129 (232)
T 3id6_C 64 AILKGLKTNPIRKGTKVLYLGAASGT-TISHVSDII----EL--NGKAYGVEF-SPRVV----RELLLVAQRRPNI--FP 129 (232)
T ss_dssp HHHTTCSCCSCCTTCEEEEETCTTSH-HHHHHHHHH----TT--TSEEEEEEC-CHHHH----HHHHHHHHHCTTE--EE
T ss_pred HHHhhhhhcCCCCCCEEEEEeecCCH-HHHHHHHHh----CC--CCEEEEEEC-cHHHH----HHHHHHhhhcCCe--EE
Confidence 4555543 2344579999999998 666665554 22 247999987 33322 2344455443 33 22
Q ss_pred EEeecCCCCCCcc-ccccCCCCceEEEeeccccCCCCchHHHHHHHH-hcCCCEEEEEe
Q 048129 225 KIVLVTETKDLNE-DKFDLNAGEAVAVYSPILLSRTRHPDFLIKMLR-KISPCVMVIIE 281 (412)
Q Consensus 225 ~~v~~~~~e~l~~-~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~vr-~L~P~vvvl~E 281 (412)
+. .+...... ..+ ..+=+.+++|.. .+...+.++..++ -|+|.-..++.
T Consensus 130 --i~-~Da~~~~~~~~~-~~~~D~I~~d~a----~~~~~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 130 --LL-ADARFPQSYKSV-VENVDVLYVDIA----QPDQTDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp --EE-CCTTCGGGTTTT-CCCEEEEEECCC----CTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred --EE-cccccchhhhcc-ccceEEEEecCC----ChhHHHHHHHHHHHhCCCCeEEEEE
Confidence 32 22222111 111 111144554433 2555566667776 89998766654
No 150
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=46.83 E-value=95 Score=26.57 Aligned_cols=105 Identities=10% Similarity=0.143 Sum_probs=55.4
Q ss_pred hHHHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEE
Q 048129 147 TQAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKI 226 (412)
Q Consensus 147 NqaIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~ 226 (412)
.+.|++.+. .+.-+|+|+|.|.|. +...|+.+ | .++|||+. +...++ .|+.... +|..
T Consensus 22 ~~~l~~~~~-~~~~~vLdiG~G~G~----~~~~l~~~--~----~~~~~~D~-~~~~~~--------~~~~~~~--~~~~ 79 (230)
T 3cc8_A 22 NPNLLKHIK-KEWKEVLDIGCSSGA----LGAAIKEN--G----TRVSGIEA-FPEAAE--------QAKEKLD--HVVL 79 (230)
T ss_dssp CHHHHTTCC-TTCSEEEEETCTTSH----HHHHHHTT--T----CEEEEEES-SHHHHH--------HHHTTSS--EEEE
T ss_pred HHHHHHHhc-cCCCcEEEeCCCCCH----HHHHHHhc--C----CeEEEEeC-CHHHHH--------HHHHhCC--cEEE
Confidence 345666665 556789999999883 55566666 1 47999987 433333 3333222 2322
Q ss_pred eecCCCCCCccccccCCCC--ceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEEe
Q 048129 227 VLVTETKDLNEDKFDLNAG--EAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVIIE 281 (412)
Q Consensus 227 v~~~~~e~l~~~~l~~~~~--E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~E 281 (412)
.+..++.. ...++ +.|+.+..+. ..++ ...+|+.+ +.|+|.-.+++.
T Consensus 80 ---~d~~~~~~---~~~~~~fD~v~~~~~l~-~~~~-~~~~l~~~~~~L~~gG~l~~~ 129 (230)
T 3cc8_A 80 ---GDIETMDM---PYEEEQFDCVIFGDVLE-HLFD-PWAVIEKVKPYIKQNGVILAS 129 (230)
T ss_dssp ---SCTTTCCC---CSCTTCEEEEEEESCGG-GSSC-HHHHHHHTGGGEEEEEEEEEE
T ss_pred ---cchhhcCC---CCCCCccCEEEECChhh-hcCC-HHHHHHHHHHHcCCCCEEEEE
Confidence 23333211 12222 3444333222 2223 34667766 567998666653
No 151
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=46.82 E-value=1.6e+02 Score=26.27 Aligned_cols=94 Identities=20% Similarity=0.246 Sum_probs=50.4
Q ss_pred CeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCCCCcc
Q 048129 158 KRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVLVTETKDLNE 237 (412)
Q Consensus 158 ~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~~~~~e~l~~ 237 (412)
..-.|+|+|.|.|. +...|+.+ | .++|||+. +...++.+.++.. +. |.. .+.+++.
T Consensus 54 ~~~~vLDiGcG~G~----~~~~l~~~--~----~~v~gvD~-s~~~l~~a~~~~~------~~---~~~---~d~~~~~- 109 (260)
T 2avn_A 54 NPCRVLDLGGGTGK----WSLFLQER--G----FEVVLVDP-SKEMLEVAREKGV------KN---VVE---AKAEDLP- 109 (260)
T ss_dssp SCCEEEEETCTTCH----HHHHHHTT--T----CEEEEEES-CHHHHHHHHHHTC------SC---EEE---CCTTSCC-
T ss_pred CCCeEEEeCCCcCH----HHHHHHHc--C----CeEEEEeC-CHHHHHHHHhhcC------CC---EEE---CcHHHCC-
Confidence 45689999999886 44556655 2 37999987 5455554444321 11 222 2333332
Q ss_pred ccccCCCC--ceEEEee-ccccCCCCchHHHHHHH-HhcCCCEEEEEe
Q 048129 238 DKFDLNAG--EAVAVYS-PILLSRTRHPDFLIKML-RKISPCVMVIIE 281 (412)
Q Consensus 238 ~~l~~~~~--E~laVn~-~~~L~~~~~~~~~L~~v-r~L~P~vvvl~E 281 (412)
..++ +.|+.+. .+.+ .++ ...+|+.+ +.|+|.-.+++.
T Consensus 110 ----~~~~~fD~v~~~~~~~~~-~~~-~~~~l~~~~~~LkpgG~l~~~ 151 (260)
T 2avn_A 110 ----FPSGAFEAVLALGDVLSY-VEN-KDKAFSEIRRVLVPDGLLIAT 151 (260)
T ss_dssp ----SCTTCEEEEEECSSHHHH-CSC-HHHHHHHHHHHEEEEEEEEEE
T ss_pred ----CCCCCEEEEEEcchhhhc-ccc-HHHHHHHHHHHcCCCeEEEEE
Confidence 2222 2333321 2222 123 55666665 678998776664
No 152
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=46.46 E-value=97 Score=29.97 Aligned_cols=105 Identities=13% Similarity=0.092 Sum_probs=59.8
Q ss_pred CCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCC--cEEEEEeecCCCCC
Q 048129 157 AKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNL--PFSFKIVLVTETKD 234 (412)
Q Consensus 157 ~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv--~Fef~~v~~~~~e~ 234 (412)
...-.|+|.|.|.|. +.-.++.+ ++ .-+|+|++. +...++.+.+++ +..|+ ..+|..- +..+
T Consensus 216 ~~~~~vLD~gCGsG~----~~i~~a~~--~~--~~~v~g~Di-s~~~l~~A~~n~----~~~gl~~~i~~~~~---D~~~ 279 (373)
T 3tm4_A 216 LDGGSVLDPMCGSGT----ILIELALR--RY--SGEIIGIEK-YRKHLIGAEMNA----LAAGVLDKIKFIQG---DATQ 279 (373)
T ss_dssp CCSCCEEETTCTTCH----HHHHHHHT--TC--CSCEEEEES-CHHHHHHHHHHH----HHTTCGGGCEEEEC---CGGG
T ss_pred CCCCEEEEccCcCcH----HHHHHHHh--CC--CCeEEEEeC-CHHHHHHHHHHH----HHcCCCCceEEEEC---Chhh
Confidence 345679999999885 44455555 22 236999987 555566665554 44566 4555443 2333
Q ss_pred CccccccCCCCceEEEeecccc--CCCCch----HHHHHHHHh-cCCCEEEEE
Q 048129 235 LNEDKFDLNAGEAVAVYSPILL--SRTRHP----DFLIKMLRK-ISPCVMVII 280 (412)
Q Consensus 235 l~~~~l~~~~~E~laVn~~~~L--~~~~~~----~~~L~~vr~-L~P~vvvl~ 280 (412)
+... ...-+.|+.|-++.. .....+ ..+++.++. |++.+++++
T Consensus 280 ~~~~---~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l~g~~~~i~ 329 (373)
T 3tm4_A 280 LSQY---VDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVLEKRGVFIT 329 (373)
T ss_dssp GGGT---CSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCcc---cCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 3221 122368888888776 222222 567777766 666666664
No 153
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=46.02 E-value=1.1e+02 Score=28.35 Aligned_cols=85 Identities=13% Similarity=0.182 Sum_probs=46.6
Q ss_pred HHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCC--cEEEEE
Q 048129 149 AIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNL--PFSFKI 226 (412)
Q Consensus 149 aIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv--~Fef~~ 226 (412)
.|++++.-...-+|+|+|.|.|.--..|. .+ + -++|||+. +...++.+.+++ +..|+ .++|..
T Consensus 19 ~i~~~~~~~~~~~VLDiG~G~G~lt~~L~----~~--~----~~v~~vD~-~~~~~~~a~~~~----~~~~~~~~v~~~~ 83 (285)
T 1zq9_A 19 SIIDKAALRPTDVVLEVGPGTGNMTVKLL----EK--A----KKVVACEL-DPRLVAELHKRV----QGTPVASKLQVLV 83 (285)
T ss_dssp HHHHHTCCCTTCEEEEECCTTSTTHHHHH----HH--S----SEEEEEES-CHHHHHHHHHHH----TTSTTGGGEEEEE
T ss_pred HHHHhcCCCCCCEEEEEcCcccHHHHHHH----hh--C----CEEEEEEC-CHHHHHHHHHHH----HhcCCCCceEEEE
Confidence 44455543445689999999997655444 33 2 26999987 444444444433 33444 344433
Q ss_pred eecCCCCCCccccccCCCCceEEEeecccc
Q 048129 227 VLVTETKDLNEDKFDLNAGEAVAVYSPILL 256 (412)
Q Consensus 227 v~~~~~e~l~~~~l~~~~~E~laVn~~~~L 256 (412)
.+..++... .=+.|+.|.++..
T Consensus 84 ---~D~~~~~~~-----~fD~vv~nlpy~~ 105 (285)
T 1zq9_A 84 ---GDVLKTDLP-----FFDTCVANLPYQI 105 (285)
T ss_dssp ---SCTTTSCCC-----CCSEEEEECCGGG
T ss_pred ---cceecccch-----hhcEEEEecCccc
Confidence 233333222 2247777876654
No 154
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=44.54 E-value=1.9e+02 Score=26.43 Aligned_cols=98 Identities=14% Similarity=0.125 Sum_probs=50.9
Q ss_pred EEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCCCCccccc
Q 048129 161 HLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVLVTETKDLNEDKF 240 (412)
Q Consensus 161 HIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~~~~~e~l~~~~l 240 (412)
.|+|+|.|.|. +...|+.+ | -++|||+. +...++ .|+.. -.++|.. .+.+++.
T Consensus 42 ~vLDvGcGtG~----~~~~l~~~--~----~~v~gvD~-s~~ml~--------~a~~~-~~v~~~~---~~~e~~~---- 94 (257)
T 4hg2_A 42 DALDCGCGSGQ----ASLGLAEF--F----ERVHAVDP-GEAQIR--------QALRH-PRVTYAV---APAEDTG---- 94 (257)
T ss_dssp EEEEESCTTTT----THHHHHTT--C----SEEEEEES-CHHHHH--------TCCCC-TTEEEEE---CCTTCCC----
T ss_pred CEEEEcCCCCH----HHHHHHHh--C----CEEEEEeC-cHHhhh--------hhhhc-CCceeeh---hhhhhhc----
Confidence 58999999985 34556655 2 36899987 433333 33332 1234433 2344432
Q ss_pred cCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEE-eecCcCC
Q 048129 241 DLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVII-EVEANHN 287 (412)
Q Consensus 241 ~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~-E~ea~~n 287 (412)
+.++..=+|-|...+.-.+ .+.+|+.+ |-|+|.-++++ .......
T Consensus 95 -~~~~sfD~v~~~~~~h~~~-~~~~~~e~~rvLkpgG~l~~~~~~~~~~ 141 (257)
T 4hg2_A 95 -LPPASVDVAIAAQAMHWFD-LDRFWAELRRVARPGAVFAAVTYGLTRV 141 (257)
T ss_dssp -CCSSCEEEEEECSCCTTCC-HHHHHHHHHHHEEEEEEEEEEEECCCBC
T ss_pred -ccCCcccEEEEeeehhHhh-HHHHHHHHHHHcCCCCEEEEEECCCCCC
Confidence 2333222333333342223 44566655 77899886654 4433333
No 155
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=44.47 E-value=57 Score=27.05 Aligned_cols=103 Identities=15% Similarity=0.207 Sum_probs=52.9
Q ss_pred HhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCC--cEEEEEee
Q 048129 151 IERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNL--PFSFKIVL 228 (412)
Q Consensus 151 leA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv--~Fef~~v~ 228 (412)
++.+.-.+.-+|+|+|.|.|. +...|+.+. .++|+++. +...++.+.+++ +..|+ .++|...
T Consensus 26 ~~~~~~~~~~~vldiG~G~G~----~~~~l~~~~------~~v~~~D~-~~~~~~~a~~~~----~~~~~~~~~~~~~~- 89 (192)
T 1l3i_A 26 MCLAEPGKNDVAVDVGCGTGG----VTLELAGRV------RRVYAIDR-NPEAISTTEMNL----QRHGLGDNVTLMEG- 89 (192)
T ss_dssp HHHHCCCTTCEEEEESCTTSH----HHHHHHTTS------SEEEEEES-CHHHHHHHHHHH----HHTTCCTTEEEEES-
T ss_pred HHhcCCCCCCEEEEECCCCCH----HHHHHHHhc------CEEEEEEC-CHHHHHHHHHHH----HHcCCCcceEEEec-
Confidence 333433445689999998874 334555442 47999987 555555555444 34455 3444332
Q ss_pred cCCCCC-CccccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEE
Q 048129 229 VTETKD-LNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVII 280 (412)
Q Consensus 229 ~~~~e~-l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~ 280 (412)
++.+ +.. ...=+.|+.+..+ .....+|+.+ +.|+|.-.+++
T Consensus 90 --d~~~~~~~----~~~~D~v~~~~~~-----~~~~~~l~~~~~~l~~gG~l~~ 132 (192)
T 1l3i_A 90 --DAPEALCK----IPDIDIAVVGGSG-----GELQEILRIIKDKLKPGGRIIV 132 (192)
T ss_dssp --CHHHHHTT----SCCEEEEEESCCT-----TCHHHHHHHHHHTEEEEEEEEE
T ss_pred --CHHHhccc----CCCCCEEEECCch-----HHHHHHHHHHHHhcCCCcEEEE
Confidence 2211 110 0111334333222 2345666665 45788755554
No 156
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=44.28 E-value=53 Score=29.61 Aligned_cols=104 Identities=10% Similarity=0.099 Sum_probs=56.0
Q ss_pred eeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc--EEEEEeecCCCCCCc
Q 048129 159 RIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP--FSFKIVLVTETKDLN 236 (412)
Q Consensus 159 ~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~--Fef~~v~~~~~e~l~ 236 (412)
.-.|+|+|.|.|.--. .|+.+- || .-+||+|+. +...++.+.++ ++..|++ .+|..- +..+.-
T Consensus 64 ~~~VLdiG~G~G~~~~----~la~~~--~~-~~~v~~vD~-s~~~~~~a~~~----~~~~g~~~~v~~~~~---d~~~~l 128 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTI----WMAREL--PA-DGQLLTLEA-DAHHAQVAREN----LQLAGVDQRVTLREG---PALQSL 128 (248)
T ss_dssp CSEEEEECCTTSHHHH----HHHTTS--CT-TCEEEEEEC-CHHHHHHHHHH----HHHTTCTTTEEEEES---CHHHHH
T ss_pred CCEEEEecCCchHHHH----HHHHhC--CC-CCEEEEEEC-CHHHHHHHHHH----HHHcCCCCcEEEEEc---CHHHHH
Confidence 4589999999885443 444442 23 378999987 44555544443 4455665 555442 221111
Q ss_pred cccccCCCCceEEEeeccccCCCCchHHHHHH-HHhcCCCEEEEEee
Q 048129 237 EDKFDLNAGEAVAVYSPILLSRTRHPDFLIKM-LRKISPCVMVIIEV 282 (412)
Q Consensus 237 ~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~-vr~L~P~vvvl~E~ 282 (412)
+..-....=+.|+++.. ......+|+. .+.|+|.-+++++.
T Consensus 129 ~~~~~~~~fD~V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~~~ 170 (248)
T 3tfw_A 129 ESLGECPAFDLIFIDAD-----KPNNPHYLRWALRYSRPGTLIIGDN 170 (248)
T ss_dssp HTCCSCCCCSEEEECSC-----GGGHHHHHHHHHHTCCTTCEEEEEC
T ss_pred HhcCCCCCeEEEEECCc-----hHHHHHHHHHHHHhcCCCeEEEEeC
Confidence 11000112245555442 1233445554 47889999888753
No 157
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=43.55 E-value=51 Score=28.48 Aligned_cols=57 Identities=11% Similarity=0.144 Sum_probs=35.3
Q ss_pred HHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHH
Q 048129 149 AIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAY 213 (412)
Q Consensus 149 aIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~ 213 (412)
.+++.+.-...-+|+|+|.|.|.--..|.+.. || .-++|+|+. +...++.+.+++.+
T Consensus 68 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-----~~--~~~v~~vD~-~~~~~~~a~~~~~~ 124 (215)
T 2yxe_A 68 MMCELLDLKPGMKVLEIGTGCGYHAAVTAEIV-----GE--DGLVVSIER-IPELAEKAERTLRK 124 (215)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHH-----CT--TSEEEEEES-CHHHHHHHHHHHHH
T ss_pred HHHHhhCCCCCCEEEEECCCccHHHHHHHHHh-----CC--CCEEEEEeC-CHHHHHHHHHHHHH
Confidence 34444444455689999999886554444433 33 268999987 55556655555443
No 158
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=43.11 E-value=33 Score=35.47 Aligned_cols=56 Identities=16% Similarity=0.280 Sum_probs=38.9
Q ss_pred CeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcC-CcEEEEEee
Q 048129 158 KRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWN-LPFSFKIVL 228 (412)
Q Consensus 158 ~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lg-v~Fef~~v~ 228 (412)
+.+.|+|+|.|-|. |-..||.+ | -++|||+. +...++.+. ..|+.-| +..+|....
T Consensus 66 ~~~~vLDvGCG~G~----~~~~la~~--g----a~V~giD~-~~~~i~~a~----~~a~~~~~~~~~~~~~~ 122 (569)
T 4azs_A 66 RPLNVLDLGCAQGF----FSLSLASK--G----ATIVGIDF-QQENINVCR----ALAEENPDFAAEFRVGR 122 (569)
T ss_dssp SCCEEEEETCTTSH----HHHHHHHT--T----CEEEEEES-CHHHHHHHH----HHHHTSTTSEEEEEECC
T ss_pred CCCeEEEECCCCcH----HHHHHHhC--C----CEEEEECC-CHHHHHHHH----HHHHhcCCCceEEEECC
Confidence 45889999999885 77888877 3 35999997 545555443 3455555 677777653
No 159
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=42.63 E-value=69 Score=28.38 Aligned_cols=45 Identities=22% Similarity=0.065 Sum_probs=29.0
Q ss_pred CCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHH
Q 048129 157 AKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRL 211 (412)
Q Consensus 157 ~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL 211 (412)
.+.-.|+|+|.|.|.-= ..|+.+ ++ .++|||+. +...++.+.+++
T Consensus 55 ~~~~~vLDlGcG~G~~~----~~l~~~--~~---~~v~gvD~-s~~~l~~a~~~~ 99 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQ----LLSACE--SF---TEIIVSDY-TDQNLWELQKWL 99 (265)
T ss_dssp CCEEEEEEESCTTCCGG----GTTGGG--TE---EEEEEEES-CHHHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHH----HHHhhc--cc---CeEEEecC-CHHHHHHHHHHH
Confidence 45678999999988432 223333 22 58999987 555666665554
No 160
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=42.47 E-value=79 Score=28.76 Aligned_cols=109 Identities=16% Similarity=0.149 Sum_probs=57.2
Q ss_pred HHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCC--cEEEEE
Q 048129 149 AIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNL--PFSFKI 226 (412)
Q Consensus 149 aIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv--~Fef~~ 226 (412)
.|++.+.-...-.|+|+|.|.|. +...|+.+- +| ..++|+++. +...++.+.+++ +..|+ ..+|..
T Consensus 103 ~i~~~~~~~~~~~VLDiG~G~G~----~~~~la~~~-~~--~~~v~~vD~-s~~~~~~a~~~~----~~~~~~~~v~~~~ 170 (277)
T 1o54_A 103 FIAMMLDVKEGDRIIDTGVGSGA----MCAVLARAV-GS--SGKVFAYEK-REEFAKLAESNL----TKWGLIERVTIKV 170 (277)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSH----HHHHHHHHT-TT--TCEEEEECC-CHHHHHHHHHHH----HHTTCGGGEEEEC
T ss_pred HHHHHhCCCCCCEEEEECCcCCH----HHHHHHHHh-CC--CcEEEEEEC-CHHHHHHHHHHH----HHcCCCCCEEEEE
Confidence 45555554445589999999885 333444442 22 368999986 555565555544 34455 244432
Q ss_pred eecCCCCCCccccccCCCCceEEEeeccccCCCCchHHHHHHHHhcCCCEEEEEee
Q 048129 227 VLVTETKDLNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKMLRKISPCVMVIIEV 282 (412)
Q Consensus 227 v~~~~~e~l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~vr~L~P~vvvl~E~ 282 (412)
.+..+. +.-..=+.|+.| .+.+...+-...+.|+|.-.+++..
T Consensus 171 ---~d~~~~----~~~~~~D~V~~~------~~~~~~~l~~~~~~L~pgG~l~~~~ 213 (277)
T 1o54_A 171 ---RDISEG----FDEKDVDALFLD------VPDPWNYIDKCWEALKGGGRFATVC 213 (277)
T ss_dssp ---CCGGGC----CSCCSEEEEEEC------CSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred ---CCHHHc----ccCCccCEEEEC------CcCHHHHHHHHHHHcCCCCEEEEEe
Confidence 222222 110111344433 2334333334457789987777755
No 161
>2qn6_B Translation initiation factor 2 alpha subunit; initiation of translation, GTP-binding, nucleotide-binding, protein biosynthesis; HET: GDP; 2.15A {Sulfolobus solfataricus} SCOP: d.58.51.1 PDB: 2qmu_B* 3qsy_B*
Probab=42.11 E-value=22 Score=28.18 Aligned_cols=39 Identities=13% Similarity=0.186 Sum_probs=32.2
Q ss_pred CCCceEEEEEecCC---ChHHHHHHHHHHHHHHHhcCCcEEEE
Q 048129 186 CPVELLKITAVGSS---SKQRMEETGKRLAYFAETWNLPFSFK 225 (412)
Q Consensus 186 gpp~~LrIT~I~~~---~~~~l~~tg~rL~~fA~~lgv~Fef~ 225 (412)
||| .-|||...+. ....|+++.+.+.+..+..|..|+|+
T Consensus 50 gaP-~Y~i~~~~~D~k~ge~~L~~ai~~i~~~i~~~gG~~~v~ 91 (93)
T 2qn6_B 50 GAP-RYRVDVVGTNPKEASEALNQIISNLIKIGKEENVDISVV 91 (93)
T ss_dssp STT-EEEEEEEESCHHHHHHHHHHHHHHHHHHHHHTTEEEEEC
T ss_pred cCC-eEEEEEEecCHHHHHHHHHHHHHHHHHHHHHhCCEEEEE
Confidence 777 5999998873 23468899999999999999999875
No 162
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=41.98 E-value=72 Score=28.03 Aligned_cols=102 Identities=13% Similarity=0.194 Sum_probs=54.5
Q ss_pred eeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc--EEEEEeecCCCCCCc
Q 048129 159 RIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP--FSFKIVLVTETKDLN 236 (412)
Q Consensus 159 ~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~--Fef~~v~~~~~e~l~ 236 (412)
.-+|+|+|.|.|.-= ..|+.+- | ..++|+|+. +...++.+.+++ +..|+. .+|.. .+..+..
T Consensus 55 ~~~vLdiG~G~G~~~----~~la~~~--~--~~~v~~vD~-~~~~~~~a~~~~----~~~~~~~~v~~~~---~d~~~~~ 118 (233)
T 2gpy_A 55 PARILEIGTAIGYSA----IRMAQAL--P--EATIVSIER-DERRYEEAHKHV----KALGLESRIELLF---GDALQLG 118 (233)
T ss_dssp CSEEEEECCTTSHHH----HHHHHHC--T--TCEEEEECC-CHHHHHHHHHHH----HHTTCTTTEEEEC---SCGGGSH
T ss_pred CCEEEEecCCCcHHH----HHHHHHC--C--CCEEEEEEC-CHHHHHHHHHHH----HHcCCCCcEEEEE---CCHHHHH
Confidence 348999999988532 3344432 2 268999987 545555555444 344553 44432 2222211
Q ss_pred cccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEEe
Q 048129 237 EDKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVIIE 281 (412)
Q Consensus 237 ~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~E 281 (412)
+....-.+=+.|+++... .....+|+.+ +.|+|.-+++++
T Consensus 119 ~~~~~~~~fD~I~~~~~~-----~~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 119 EKLELYPLFDVLFIDAAK-----GQYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp HHHTTSCCEEEEEEEGGG-----SCHHHHHHHHGGGEEEEEEEEEE
T ss_pred HhcccCCCccEEEECCCH-----HHHHHHHHHHHHHcCCCeEEEEE
Confidence 110000112566665543 2344556555 778999888875
No 163
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=41.31 E-value=47 Score=24.66 Aligned_cols=34 Identities=26% Similarity=0.441 Sum_probs=23.5
Q ss_pred eEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEE
Q 048129 190 LLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKI 226 (412)
Q Consensus 190 ~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~ 226 (412)
-+||||| +...-++....-.+.|+.+|+...|..
T Consensus 43 eiritgv---peqvrkelakeaerlakefnitvtyti 76 (85)
T 2kl8_A 43 EIRITGV---PEQVRKELAKEAERLAKEFNITVTYTI 76 (85)
T ss_dssp EEEEESC---CHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred EEEEecC---hHHHHHHHHHHHHHHHHhcCeEEEEEE
Confidence 5999998 334444555555667788898877764
No 164
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=41.12 E-value=26 Score=29.99 Aligned_cols=52 Identities=23% Similarity=0.365 Sum_probs=27.8
Q ss_pred HHhhhhc-CCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHH
Q 048129 150 IIERVAS-AKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKR 210 (412)
Q Consensus 150 IleA~~g-~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~r 210 (412)
+++.+.. .+.-+|+|+|.|.|. +...|+.+ +| ..++|||+. +...++.+.++
T Consensus 21 ~~~~l~~~~~~~~vLDiG~G~G~----~~~~l~~~--~~--~~~v~~vD~-~~~~~~~a~~~ 73 (215)
T 4dzr_A 21 AIRFLKRMPSGTRVIDVGTGSGC----IAVSIALA--CP--GVSVTAVDL-SMDALAVARRN 73 (215)
T ss_dssp HHHHHTTCCTTEEEEEEESSBCH----HHHHHHHH--CT--TEEEEEEEC-C----------
T ss_pred HHHHhhhcCCCCEEEEecCCHhH----HHHHHHHh--CC--CCeEEEEEC-CHHHHHHHHHH
Confidence 3344443 567899999999995 33444444 22 378999997 33444444443
No 165
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=40.39 E-value=46 Score=28.51 Aligned_cols=97 Identities=10% Similarity=-0.019 Sum_probs=54.5
Q ss_pred eeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc-EEEEEeecCCCCCCcc
Q 048129 159 RIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP-FSFKIVLVTETKDLNE 237 (412)
Q Consensus 159 ~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~-Fef~~v~~~~~e~l~~ 237 (412)
.-+|+|+|.|.|.--..|.+.+ | ..++|+|+. +...++.+.++ ++..|++ .+|..- ++.++.+
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~-------~-~~~v~~vD~-s~~~~~~a~~~----~~~~~~~~v~~~~~---d~~~~~~ 129 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVR-------P-EAHFTLLDS-LGKRVRFLRQV----QHELKLENIEPVQS---RVEEFPS 129 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHC-------T-TSEEEEEES-CHHHHHHHHHH----HHHTTCSSEEEEEC---CTTTSCC
T ss_pred CCeEEEECCCCCHHHHHHHHHC-------C-CCEEEEEeC-CHHHHHHHHHH----HHHcCCCCeEEEec---chhhCCc
Confidence 3489999999997554444332 2 268999987 44445444433 4455665 555443 3333321
Q ss_pred ccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEEe
Q 048129 238 DKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVIIE 281 (412)
Q Consensus 238 ~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~E 281 (412)
. ..=+.|+.|. ......+++.+ +.|+|.-.++++
T Consensus 130 ~----~~~D~i~~~~------~~~~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 130 E----PPFDGVISRA------FASLNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp C----SCEEEEECSC------SSSHHHHHHHHTTSEEEEEEEEEE
T ss_pred c----CCcCEEEEec------cCCHHHHHHHHHHhcCCCcEEEEE
Confidence 1 1113333322 13455677766 567998877776
No 166
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=39.89 E-value=81 Score=29.06 Aligned_cols=52 Identities=17% Similarity=0.214 Sum_probs=34.6
Q ss_pred HHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHH
Q 048129 149 AIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRL 211 (412)
Q Consensus 149 aIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL 211 (412)
.|++++.-...-+|+|+|.|.|. |-..|+.+. -++|+|+. +...++.+.+++
T Consensus 20 ~iv~~~~~~~~~~VLEIG~G~G~----lt~~La~~~------~~V~avEi-d~~~~~~~~~~~ 71 (255)
T 3tqs_A 20 KIVSAIHPQKTDTLVEIGPGRGA----LTDYLLTEC------DNLALVEI-DRDLVAFLQKKY 71 (255)
T ss_dssp HHHHHHCCCTTCEEEEECCTTTT----THHHHTTTS------SEEEEEEC-CHHHHHHHHHHH
T ss_pred HHHHhcCCCCcCEEEEEcccccH----HHHHHHHhC------CEEEEEEC-CHHHHHHHHHHH
Confidence 35666654555689999999886 456677662 36999987 545555555444
No 167
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=39.79 E-value=74 Score=29.11 Aligned_cols=108 Identities=11% Similarity=0.178 Sum_probs=57.3
Q ss_pred HHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhc-CCcEEEEEe
Q 048129 149 AIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETW-NLPFSFKIV 227 (412)
Q Consensus 149 aIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~l-gv~Fef~~v 227 (412)
.|++++.-...-+|+|+|.|.|. |-..|+.++ .-++|||+. +...++. |+.. +-. ++.+
T Consensus 22 ~iv~~~~~~~~~~VLDiG~G~G~----lt~~L~~~~-----~~~v~avEi-d~~~~~~--------~~~~~~~~--v~~i 81 (249)
T 3ftd_A 22 KIAEELNIEEGNTVVEVGGGTGN----LTKVLLQHP-----LKKLYVIEL-DREMVEN--------LKSIGDER--LEVI 81 (249)
T ss_dssp HHHHHTTCCTTCEEEEEESCHHH----HHHHHTTSC-----CSEEEEECC-CHHHHHH--------HTTSCCTT--EEEE
T ss_pred HHHHhcCCCCcCEEEEEcCchHH----HHHHHHHcC-----CCeEEEEEC-CHHHHHH--------HHhccCCC--eEEE
Confidence 35555554455689999999775 677788772 257999986 4333333 3222 112 3334
Q ss_pred ecCCCCCCccccccCCCCceEEEeeccccCCCCchHHHHHHHHhc--CCCEEEEEeec
Q 048129 228 LVTETKDLNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKMLRKI--SPCVMVIIEVE 283 (412)
Q Consensus 228 ~~~~~e~l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~vr~L--~P~vvvl~E~e 283 (412)
. .+..+++.+.+. ..-.++-|.++... -+.+++.+... -+..++++..|
T Consensus 82 ~-~D~~~~~~~~~~--~~~~vv~NlPy~i~----~~il~~ll~~~~~~~~~~~m~Qke 132 (249)
T 3ftd_A 82 N-EDASKFPFCSLG--KELKVVGNLPYNVA----SLIIENTVYNKDCVPLAVFMVQKE 132 (249)
T ss_dssp C-SCTTTCCGGGSC--SSEEEEEECCTTTH----HHHHHHHHHTGGGCSEEEEEEEHH
T ss_pred E-cchhhCChhHcc--CCcEEEEECchhcc----HHHHHHHHhcCCCCceEEEEEeHH
Confidence 3 344444433221 12255667777541 12344444432 45666666655
No 168
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=39.60 E-value=68 Score=27.25 Aligned_cols=45 Identities=11% Similarity=-0.034 Sum_probs=28.9
Q ss_pred CCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHH
Q 048129 157 AKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRL 211 (412)
Q Consensus 157 ~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL 211 (412)
.+.-+|+|+|.|.|.- ...|+.+ |+ . ++|+|+. +...++.+.+++
T Consensus 41 ~~~~~vLdiGcG~G~~----~~~l~~~--~~--~-~v~~~D~-s~~~~~~a~~~~ 85 (215)
T 2pxx_A 41 RPEDRILVLGCGNSAL----SYELFLG--GF--P-NVTSVDY-SSVVVAAMQACY 85 (215)
T ss_dssp CTTCCEEEETCTTCSH----HHHHHHT--TC--C-CEEEEES-CHHHHHHHHHHT
T ss_pred CCCCeEEEECCCCcHH----HHHHHHc--CC--C-cEEEEeC-CHHHHHHHHHhc
Confidence 3456899999998853 3445554 33 2 7999987 555566555554
No 169
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=39.37 E-value=47 Score=30.31 Aligned_cols=101 Identities=12% Similarity=0.058 Sum_probs=54.6
Q ss_pred CeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc-EEEEEeecCCCCCCc
Q 048129 158 KRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP-FSFKIVLVTETKDLN 236 (412)
Q Consensus 158 ~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~-Fef~~v~~~~~e~l~ 236 (412)
..-+|+|+|.|.|.--..|-+ +. | ..+||+|+. +...++.+.+ -++.+|+. .+|.. .+.+++.
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~----~~---~-~~~v~~vD~-s~~~~~~a~~----~~~~~~l~~v~~~~---~d~~~~~ 143 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKI----VR---P-ELELVLVDA-TRKKVAFVER----AIEVLGLKGARALW---GRAEVLA 143 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHH----HC---T-TCEEEEEES-CHHHHHHHHH----HHHHHTCSSEEEEE---CCHHHHT
T ss_pred CCCEEEEEcCCCCHHHHHHHH----HC---C-CCEEEEEEC-CHHHHHHHHH----HHHHhCCCceEEEE---CcHHHhh
Confidence 456899999998875433332 21 2 378999997 4444544443 34556764 44433 3344443
Q ss_pred cccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEE
Q 048129 237 EDKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVII 280 (412)
Q Consensus 237 ~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~ 280 (412)
.....-..=+.|+.+.. .+.+.+++.+ +-|+|.-..++
T Consensus 144 ~~~~~~~~fD~I~s~a~------~~~~~ll~~~~~~LkpgG~l~~ 182 (249)
T 3g89_A 144 REAGHREAYARAVARAV------APLCVLSELLLPFLEVGGAAVA 182 (249)
T ss_dssp TSTTTTTCEEEEEEESS------CCHHHHHHHHGGGEEEEEEEEE
T ss_pred cccccCCCceEEEECCc------CCHHHHHHHHHHHcCCCeEEEE
Confidence 21000011134444322 3456677766 56788876665
No 170
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=38.83 E-value=1.7e+02 Score=25.62 Aligned_cols=103 Identities=10% Similarity=0.084 Sum_probs=54.4
Q ss_pred CeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCCCCcc
Q 048129 158 KRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVLVTETKDLNE 237 (412)
Q Consensus 158 ~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~~~~~e~l~~ 237 (412)
..-+|+|+|.|.|. +...|+.+. + -++|||+. +...++.+.+ .++..|...+|.. .+++++..
T Consensus 60 ~~~~vLDiGcGtG~----~~~~l~~~~---~--~~v~gvD~-s~~~l~~a~~----~~~~~~~~v~~~~---~d~~~~~~ 122 (236)
T 1zx0_A 60 KGGRVLEVGFGMAI----AASKVQEAP---I--DEHWIIEC-NDGVFQRLRD----WAPRQTHKVIPLK---GLWEDVAP 122 (236)
T ss_dssp TCEEEEEECCTTSH----HHHHHHTSC---E--EEEEEEEC-CHHHHHHHHH----HGGGCSSEEEEEE---SCHHHHGG
T ss_pred CCCeEEEEeccCCH----HHHHHHhcC---C--CeEEEEcC-CHHHHHHHHH----HHHhcCCCeEEEe---cCHHHhhc
Confidence 45689999999884 344455432 2 38999987 5455554443 4455564454443 23333311
Q ss_pred ccccCCCC--ceEEE-eeccccC--CCCchHHHHHHH-HhcCCCEEEEE
Q 048129 238 DKFDLNAG--EAVAV-YSPILLS--RTRHPDFLIKML-RKISPCVMVII 280 (412)
Q Consensus 238 ~~l~~~~~--E~laV-n~~~~L~--~~~~~~~~L~~v-r~L~P~vvvl~ 280 (412)
...++ +.|+. +..+... ....++.+|+.+ |-|+|.-+++.
T Consensus 123 ---~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~ 168 (236)
T 1zx0_A 123 ---TLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp ---GSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEE
T ss_pred ---ccCCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEE
Confidence 12222 44444 2222221 122234556654 77899987764
No 171
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=37.20 E-value=2e+02 Score=24.73 Aligned_cols=97 Identities=18% Similarity=0.283 Sum_probs=51.9
Q ss_pred CCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCCCCc
Q 048129 157 AKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVLVTETKDLN 236 (412)
Q Consensus 157 ~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~~~~~e~l~ 236 (412)
.+.-.|+|+|.|.|.-- ..|+.+ ++ ++|||+. +...++.+.+++ -..+|... +..++.
T Consensus 39 ~~~~~vLdiG~G~G~~~----~~l~~~--~~----~v~~~D~-s~~~~~~a~~~~--------~~~~~~~~---d~~~~~ 96 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHL----EHFTKE--FG----DTAGLEL-SEDMLTHARKRL--------PDATLHQG---DMRDFR 96 (239)
T ss_dssp TTCCEEEEETCTTSHHH----HHHHHH--HS----EEEEEES-CHHHHHHHHHHC--------TTCEEEEC---CTTTCC
T ss_pred CCCCeEEEecccCCHHH----HHHHHh--CC----cEEEEeC-CHHHHHHHHHhC--------CCCEEEEC---CHHHcc
Confidence 34568999999988543 344444 22 6999987 545555444432 12344332 233322
Q ss_pred cccccCCCCc-eEEEee--ccc-cCCCCchHHHHHHH-HhcCCCEEEEEe
Q 048129 237 EDKFDLNAGE-AVAVYS--PIL-LSRTRHPDFLIKML-RKISPCVMVIIE 281 (412)
Q Consensus 237 ~~~l~~~~~E-~laVn~--~~~-L~~~~~~~~~L~~v-r~L~P~vvvl~E 281 (412)
. ++. -+|+.+ .+. +..+.....+|+.+ +.|+|.-.++++
T Consensus 97 -----~-~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (239)
T 3bxo_A 97 -----L-GRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVE 140 (239)
T ss_dssp -----C-SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred -----c-CCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 1 121 233311 221 23334456677766 678999888875
No 172
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=36.51 E-value=1.2e+02 Score=28.66 Aligned_cols=86 Identities=14% Similarity=0.161 Sum_probs=47.0
Q ss_pred HHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEee
Q 048129 149 AIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVL 228 (412)
Q Consensus 149 aIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~ 228 (412)
.|++++.-...-+|+|+|.|.|..- ..|+.+. -++|+|+. +...++.+.+++. ..+ .+++ +.
T Consensus 41 ~Iv~~l~~~~~~~VLEIG~G~G~lT----~~La~~~------~~V~aVEi-d~~li~~a~~~~~----~~~-~v~v--i~ 102 (295)
T 3gru_A 41 KAVESANLTKDDVVLEIGLGKGILT----EELAKNA------KKVYVIEI-DKSLEPYANKLKE----LYN-NIEI--IW 102 (295)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHH----HHHHHHS------SEEEEEES-CGGGHHHHHHHHH----HCS-SEEE--EE
T ss_pred HHHHhcCCCCcCEEEEECCCchHHH----HHHHhcC------CEEEEEEC-CHHHHHHHHHHhc----cCC-CeEE--EE
Confidence 3455555445568999999998744 4444441 36899987 4444555555543 111 2333 33
Q ss_pred cCCCCCCccccccCCCCceEEEeecccc
Q 048129 229 VTETKDLNEDKFDLNAGEAVAVYSPILL 256 (412)
Q Consensus 229 ~~~~e~l~~~~l~~~~~E~laVn~~~~L 256 (412)
.+..++.... .+-+.|+.|.++..
T Consensus 103 -gD~l~~~~~~---~~fD~Iv~NlPy~i 126 (295)
T 3gru_A 103 -GDALKVDLNK---LDFNKVVANLPYQI 126 (295)
T ss_dssp -SCTTTSCGGG---SCCSEEEEECCGGG
T ss_pred -CchhhCCccc---CCccEEEEeCcccc
Confidence 3343333222 12357778876643
No 173
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=35.84 E-value=88 Score=30.07 Aligned_cols=110 Identities=7% Similarity=0.043 Sum_probs=57.8
Q ss_pred CeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCCCCcc
Q 048129 158 KRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVLVTETKDLNE 237 (412)
Q Consensus 158 ~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~~~~~e~l~~ 237 (412)
+.++|+|+|.|.| .+...|+++. | ..+||+|+. +...++.+.+++.. .-+-.+++.. .+..++..
T Consensus 89 ~~~rVLdIG~G~G----~la~~la~~~---p-~~~v~~VEi-dp~vi~~Ar~~~~~---~~~~rv~v~~---~Da~~~l~ 153 (317)
T 3gjy_A 89 SKLRITHLGGGAC----TMARYFADVY---P-QSRNTVVEL-DAELARLSREWFDI---PRAPRVKIRV---DDARMVAE 153 (317)
T ss_dssp GGCEEEEESCGGG----HHHHHHHHHS---T-TCEEEEEES-CHHHHHHHHHHSCC---CCTTTEEEEE---SCHHHHHH
T ss_pred CCCEEEEEECCcC----HHHHHHHHHC---C-CcEEEEEEC-CHHHHHHHHHhccc---cCCCceEEEE---CcHHHHHh
Confidence 4679999999988 5666777642 2 258999987 44444444433210 0011233332 12111100
Q ss_pred ccccCCCCceEEEeeccccCCCCch--HHHHHHH-HhcCCCEEEEEeec
Q 048129 238 DKFDLNAGEAVAVYSPILLSRTRHP--DFLIKML-RKISPCVMVIIEVE 283 (412)
Q Consensus 238 ~~l~~~~~E~laVn~~~~L~~~~~~--~~~L~~v-r~L~P~vvvl~E~e 283 (412)
.+.-..=++|++++......+..+ ..|++.+ +.|+|.-++++...
T Consensus 154 -~~~~~~fDvIi~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 154 -SFTPASRDVIIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp -TCCTTCEEEEEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -hccCCCCCEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 000012257777654433222222 5677766 67999988877553
No 174
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=34.42 E-value=2.1e+02 Score=27.04 Aligned_cols=109 Identities=14% Similarity=0.114 Sum_probs=58.1
Q ss_pred HHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc-EEEEEee
Q 048129 150 IIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP-FSFKIVL 228 (412)
Q Consensus 150 IleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~-Fef~~v~ 228 (412)
+++...-...-.|+|.|.|.|. +.-.++.+. +| ..+|+|++. +...++.+.++ ++..|++ .+|..-
T Consensus 195 l~~~~~~~~~~~vLD~gcGsG~----~~ie~a~~~-~~--~~~v~g~Di-~~~~i~~a~~n----~~~~g~~~i~~~~~- 261 (354)
T 3tma_A 195 LLRLADARPGMRVLDPFTGSGT----IALEAASTL-GP--TSPVYAGDL-DEKRLGLAREA----ALASGLSWIRFLRA- 261 (354)
T ss_dssp HHHHTTCCTTCCEEESSCTTSH----HHHHHHHHH-CT--TSCEEEEES-CHHHHHHHHHH----HHHTTCTTCEEEEC-
T ss_pred HHHHhCCCCCCEEEeCCCCcCH----HHHHHHHhh-CC--CceEEEEEC-CHHHHHHHHHH----HHHcCCCceEEEeC-
Confidence 3443333445579999999885 333344432 22 267999987 54556555544 4445665 444332
Q ss_pred cCCCCCCccccccCCCCceEEEeeccccCCCC--c----hHHHHHHH-HhcCCCE
Q 048129 229 VTETKDLNEDKFDLNAGEAVAVYSPILLSRTR--H----PDFLIKML-RKISPCV 276 (412)
Q Consensus 229 ~~~~e~l~~~~l~~~~~E~laVn~~~~L~~~~--~----~~~~L~~v-r~L~P~v 276 (412)
+..++... ...-+.|+.|-++...... . ...+++.+ +.|+|.-
T Consensus 262 --D~~~~~~~---~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG 311 (354)
T 3tma_A 262 --DARHLPRF---FPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGG 311 (354)
T ss_dssp --CGGGGGGT---CCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTC
T ss_pred --ChhhCccc---cCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCc
Confidence 33333221 1122788888887652221 1 14566655 4567843
No 175
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=34.25 E-value=1.7e+02 Score=24.81 Aligned_cols=100 Identities=11% Similarity=0.148 Sum_probs=51.0
Q ss_pred HHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEeec
Q 048129 150 IIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVLV 229 (412)
Q Consensus 150 IleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~~ 229 (412)
+++.+.. +.-.|+|+|.|.|. +...| +- -++|||+. +...++.+.+++ -++ +|..
T Consensus 29 ~l~~~~~-~~~~vLdiG~G~G~----~~~~l-----~~---~~v~~vD~-s~~~~~~a~~~~------~~~--~~~~--- 83 (211)
T 2gs9_A 29 ALKGLLP-PGESLLEVGAGTGY----WLRRL-----PY---PQKVGVEP-SEAMLAVGRRRA------PEA--TWVR--- 83 (211)
T ss_dssp HHHTTCC-CCSEEEEETCTTCH----HHHHC-----CC---SEEEEECC-CHHHHHHHHHHC------TTS--EEEC---
T ss_pred HHHHhcC-CCCeEEEECCCCCH----hHHhC-----CC---CeEEEEeC-CHHHHHHHHHhC------CCc--EEEE---
Confidence 3444433 55689999999884 22223 11 27999987 545555544443 133 3322
Q ss_pred CCCCCCccccccCCCC--ceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEEe
Q 048129 230 TETKDLNEDKFDLNAG--EAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVIIE 281 (412)
Q Consensus 230 ~~~e~l~~~~l~~~~~--E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~E 281 (412)
.+.+++. ..++ +.|+.+. .+..-.....+|+.+ +.|+|.-.+++.
T Consensus 84 ~d~~~~~-----~~~~~fD~v~~~~--~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 131 (211)
T 2gs9_A 84 AWGEALP-----FPGESFDVVLLFT--TLEFVEDVERVLLEARRVLRPGGALVVG 131 (211)
T ss_dssp CCTTSCC-----SCSSCEEEEEEES--CTTTCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred cccccCC-----CCCCcEEEEEEcC--hhhhcCCHHHHHHHHHHHcCCCCEEEEE
Confidence 2333332 2222 3444433 332222345566655 778998665553
No 176
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=33.87 E-value=3e+02 Score=25.80 Aligned_cols=110 Identities=11% Similarity=0.087 Sum_probs=62.2
Q ss_pred CCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCCCCc
Q 048129 157 AKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVLVTETKDLN 236 (412)
Q Consensus 157 ~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~~~~~e~l~ 236 (412)
....+|+|.+.|.|.--..+.+.+.... + . ..+++|++. +...++.+..++. ..|+..+ .+..+.+....
T Consensus 129 ~~~~~VlDp~cGsG~~l~~~~~~~~~~~-~-~-~~~v~GiDi-~~~~~~~a~~n~~----~~g~~~~--i~~~D~l~~~~ 198 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLTTVINQLELKG-D-V-DVHASGVDV-DDLLISLALVGAD----LQRQKMT--LLHQDGLANLL 198 (344)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHHHTTS-S-C-EEEEEEEES-CHHHHHHHHHHHH----HHTCCCE--EEESCTTSCCC
T ss_pred CCCCEEEeCCCCccHHHHHHHHHHHHhc-C-C-CceEEEEEC-CHHHHHHHHHHHH----hCCCCce--EEECCCCCccc
Confidence 4678999999999987777777765432 2 2 489999987 4455555555443 2355433 33322222111
Q ss_pred cccccCCCCceEEEeecccc-CC-----------C-C--ch--HHHHHHHHhcCCCEEEEEe
Q 048129 237 EDKFDLNAGEAVAVYSPILL-SR-----------T-R--HP--DFLIKMLRKISPCVMVIIE 281 (412)
Q Consensus 237 ~~~l~~~~~E~laVn~~~~L-~~-----------~-~--~~--~~~L~~vr~L~P~vvvl~E 281 (412)
...=+.|+.|-+|.. .. + + .. .-+...++.|+|.-.+.+.
T Consensus 199 -----~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v 255 (344)
T 2f8l_A 199 -----VDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFL 255 (344)
T ss_dssp -----CCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEE
T ss_pred -----cCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEE
Confidence 112257777877643 10 0 0 01 2344556889998555443
No 177
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=33.86 E-value=66 Score=30.21 Aligned_cols=108 Identities=11% Similarity=0.079 Sum_probs=58.1
Q ss_pred HHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc-EEEEEe
Q 048129 149 AIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP-FSFKIV 227 (412)
Q Consensus 149 aIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~-Fef~~v 227 (412)
.+++.+.-...-+|+|+|.|.|. +...|+.+ ++. .-++|||+. +...++.+.+++ +..|++ .+|..-
T Consensus 66 ~l~~~l~~~~~~~VLDiGcG~G~----~~~~la~~--~~~-~~~v~gvD~-s~~~~~~a~~~~----~~~g~~~v~~~~~ 133 (317)
T 1dl5_A 66 LFMEWVGLDKGMRVLEIGGGTGY----NAAVMSRV--VGE-KGLVVSVEY-SRKICEIAKRNV----ERLGIENVIFVCG 133 (317)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSH----HHHHHHHH--HCT-TCEEEEEES-CHHHHHHHHHHH----HHTTCCSEEEEES
T ss_pred HHHHhcCCCCcCEEEEecCCchH----HHHHHHHh--cCC-CCEEEEEEC-CHHHHHHHHHHH----HHcCCCCeEEEEC
Confidence 45555554455689999998874 44455544 222 268999987 555555555444 345554 444432
Q ss_pred ecCCCCCCccccccCCCCceEEEeeccccCCCCchHHHHHHHHhcCCCEEEEEe
Q 048129 228 LVTETKDLNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKMLRKISPCVMVIIE 281 (412)
Q Consensus 228 ~~~~~e~l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~vr~L~P~vvvl~E 281 (412)
+..+..+. -.+=+.|+++.++.- .+ + ...+.|+|.-.+++.
T Consensus 134 ---d~~~~~~~---~~~fD~Iv~~~~~~~-~~---~---~~~~~LkpgG~lvi~ 174 (317)
T 1dl5_A 134 ---DGYYGVPE---FSPYDVIFVTVGVDE-VP---E---TWFTQLKEGGRVIVP 174 (317)
T ss_dssp ---CGGGCCGG---GCCEEEEEECSBBSC-CC---H---HHHHHEEEEEEEEEE
T ss_pred ---Chhhcccc---CCCeEEEEEcCCHHH-HH---H---HHHHhcCCCcEEEEE
Confidence 23222111 112255666555431 11 2 345678898776664
No 178
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=33.73 E-value=47 Score=30.16 Aligned_cols=53 Identities=15% Similarity=0.242 Sum_probs=32.6
Q ss_pred HHHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHH
Q 048129 148 QAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRL 211 (412)
Q Consensus 148 qaIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL 211 (412)
+.|++++.-...-+|+|+|.|.|. +...|+.+. -++|||+. +...++.+.+++
T Consensus 20 ~~i~~~~~~~~~~~VLDiG~G~G~----lt~~l~~~~------~~v~~vD~-~~~~~~~a~~~~ 72 (244)
T 1qam_A 20 DKIMTNIRLNEHDNIFEIGSGKGH----FTLELVQRC------NFVTAIEI-DHKLCKTTENKL 72 (244)
T ss_dssp HHHHTTCCCCTTCEEEEECCTTSH----HHHHHHHHS------SEEEEECS-CHHHHHHHHHHT
T ss_pred HHHHHhCCCCCCCEEEEEeCCchH----HHHHHHHcC------CeEEEEEC-CHHHHHHHHHhh
Confidence 344455543445689999999886 445555552 36999987 444454444443
No 179
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=33.44 E-value=88 Score=27.18 Aligned_cols=57 Identities=11% Similarity=0.096 Sum_probs=34.7
Q ss_pred HHHhhhh--cCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHH
Q 048129 149 AIIERVA--SAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAY 213 (412)
Q Consensus 149 aIleA~~--g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~ 213 (412)
.+++.+. -...-+|+|+|.|.|..-..|.+.+ || ..++|+|+. +...++.+.+++.+
T Consensus 66 ~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~-----~~--~~~v~~vD~-s~~~~~~a~~~~~~ 124 (226)
T 1i1n_A 66 YALELLFDQLHEGAKALDVGSGSGILTACFARMV-----GC--TGKVIGIDH-IKELVDDSVNNVRK 124 (226)
T ss_dssp HHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHH-----CT--TCEEEEEES-CHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHh-----CC--CcEEEEEeC-CHHHHHHHHHHHHh
Confidence 3444443 2344589999999886544444333 22 368999987 55566666655543
No 180
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=32.32 E-value=2.3e+02 Score=24.60 Aligned_cols=101 Identities=12% Similarity=0.084 Sum_probs=52.6
Q ss_pred eeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCCCCccc
Q 048129 159 RIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVLVTETKDLNED 238 (412)
Q Consensus 159 ~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~~~~~e~l~~~ 238 (412)
.-+|+|+|.|.|. +...|+.+- || .-+++||+. +...++ .+.+.|+.. -..+|.. .+..+..
T Consensus 78 ~~~vLDlG~G~G~----~~~~la~~~-g~--~~~v~gvD~-s~~~i~----~~~~~a~~~-~~v~~~~---~d~~~~~-- 139 (233)
T 2ipx_A 78 GAKVLYLGAASGT----TVSHVSDIV-GP--DGLVYAVEF-SHRSGR----DLINLAKKR-TNIIPVI---EDARHPH-- 139 (233)
T ss_dssp TCEEEEECCTTSH----HHHHHHHHH-CT--TCEEEEECC-CHHHHH----HHHHHHHHC-TTEEEEC---SCTTCGG--
T ss_pred CCEEEEEcccCCH----HHHHHHHHh-CC--CcEEEEEEC-CHHHHH----HHHHHhhcc-CCeEEEE---cccCChh--
Confidence 4589999999886 334444442 22 257999987 433222 333444442 2233332 2233221
Q ss_pred cccCCCC--ceEEEeeccccCCCCchHHHHH-HHHhcCCCEEEEEe
Q 048129 239 KFDLNAG--EAVAVYSPILLSRTRHPDFLIK-MLRKISPCVMVIIE 281 (412)
Q Consensus 239 ~l~~~~~--E~laVn~~~~L~~~~~~~~~L~-~vr~L~P~vvvl~E 281 (412)
.+...++ +.|+.|.. .+.....++. ..+.|+|.-.++++
T Consensus 140 ~~~~~~~~~D~V~~~~~----~~~~~~~~~~~~~~~LkpgG~l~i~ 181 (233)
T 2ipx_A 140 KYRMLIAMVDVIFADVA----QPDQTRIVALNAHTFLRNGGHFVIS 181 (233)
T ss_dssp GGGGGCCCEEEEEECCC----CTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhcccCCcEEEEEEcCC----CccHHHHHHHHHHHHcCCCeEEEEE
Confidence 1111111 44444433 3344445565 77899999888875
No 181
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=32.13 E-value=1.9e+02 Score=22.97 Aligned_cols=70 Identities=14% Similarity=0.048 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEEeecCCCCCCccccccCCCCceEEEeecccc-C-CCC-chHHHHHHHHh-cCCCEEEE
Q 048129 204 MEETGKRLAYFAETWNLPFSFKIVLVTETKDLNEDKFDLNAGEAVAVYSPILL-S-RTR-HPDFLIKMLRK-ISPCVMVI 279 (412)
Q Consensus 204 l~~tg~rL~~fA~~lgv~Fef~~v~~~~~e~l~~~~l~~~~~E~laVn~~~~L-~-~~~-~~~~~L~~vr~-L~P~vvvl 279 (412)
-+.+.+.+.+-++..|++.+...+. +.+.+. +...+.|++=++..- . .|. ....|++.+.. ++-+-+.+
T Consensus 12 T~~iA~~ia~~l~~~g~~v~~~~~~-----~~~~~~--l~~~d~iiig~pty~~g~~p~~~~~~fl~~l~~~l~~k~~~~ 84 (138)
T 5nul_A 12 TEKMAELIAKGIIESGKDVNTINVS-----DVNIDE--LLNEDILILGCSAMTDEVLEESEFEPFIEEISTKISGKKVAL 84 (138)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEEGG-----GCCHHH--HTTCSEEEEEECCBTTTBCCTTTHHHHHHHHGGGCTTCEEEE
T ss_pred HHHHHHHHHHHHHHCCCeEEEEEhh-----hCCHHH--HhhCCEEEEEcCccCCCCCChHHHHHHHHHHHhhcCCCEEEE
Confidence 4567777888888888876655542 222332 345566666655544 2 343 68899999876 55554444
Q ss_pred E
Q 048129 280 I 280 (412)
Q Consensus 280 ~ 280 (412)
.
T Consensus 85 f 85 (138)
T 5nul_A 85 F 85 (138)
T ss_dssp E
T ss_pred E
Confidence 3
No 182
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=31.85 E-value=3e+02 Score=25.07 Aligned_cols=96 Identities=10% Similarity=0.034 Sum_probs=51.0
Q ss_pred eEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc--EEEEEeecCCCCCCcc
Q 048129 160 IHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP--FSFKIVLVTETKDLNE 237 (412)
Q Consensus 160 vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~--Fef~~v~~~~~e~l~~ 237 (412)
=.|+|+|.|.|.- -..+|.+ |+ . ++|||+. +...++.+.++ ++..|++ .+|.. .+..++..
T Consensus 127 ~~VLDlgcG~G~~----~~~la~~--~~--~-~V~~vD~-s~~~~~~a~~n----~~~n~~~~~v~~~~---~D~~~~~~ 189 (278)
T 2frn_A 127 ELVVDMFAGIGHL----SLPIAVY--GK--A-KVIAIEK-DPYTFKFLVEN----IHLNKVEDRMSAYN---MDNRDFPG 189 (278)
T ss_dssp CEEEETTCTTTTT----HHHHHHH--TC--C-EEEEECC-CHHHHHHHHHH----HHHTTCTTTEEEEC---SCTTTCCC
T ss_pred CEEEEecccCCHH----HHHHHHh--CC--C-EEEEEEC-CHHHHHHHHHH----HHHcCCCceEEEEE---CCHHHhcc
Confidence 3689999999853 2233333 33 2 7999987 54555544443 4555665 44433 23333322
Q ss_pred ccccCCCCceEEEeeccccCCCCchHHHHH-HHHhcCCCEEEEEee
Q 048129 238 DKFDLNAGEAVAVYSPILLSRTRHPDFLIK-MLRKISPCVMVIIEV 282 (412)
Q Consensus 238 ~~l~~~~~E~laVn~~~~L~~~~~~~~~L~-~vr~L~P~vvvl~E~ 282 (412)
-..=+.|+.|.+ .....++. ..+.|+|.-++++..
T Consensus 190 ----~~~fD~Vi~~~p------~~~~~~l~~~~~~LkpgG~l~~~~ 225 (278)
T 2frn_A 190 ----ENIADRILMGYV------VRTHEFIPKALSIAKDGAIIHYHN 225 (278)
T ss_dssp ----CSCEEEEEECCC------SSGGGGHHHHHHHEEEEEEEEEEE
T ss_pred ----cCCccEEEECCc------hhHHHHHHHHHHHCCCCeEEEEEE
Confidence 111144554432 22233444 567899986666543
No 183
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=31.42 E-value=3.4e+02 Score=25.68 Aligned_cols=99 Identities=7% Similarity=0.024 Sum_probs=54.0
Q ss_pred CeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCC-cEEEEEeecCCCCCCc
Q 048129 158 KRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNL-PFSFKIVLVTETKDLN 236 (412)
Q Consensus 158 ~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv-~Fef~~v~~~~~e~l~ 236 (412)
..=+|+|+|.|.|. ...++ +|..+| -++|||+. +...++.+.+++.+ .|+ .++|.. .+..++.
T Consensus 122 ~g~rVLDIGcG~G~-~ta~~--lA~~~g-----a~V~gIDi-s~~~l~~Ar~~~~~----~gl~~v~~v~---gDa~~l~ 185 (298)
T 3fpf_A 122 RGERAVFIGGGPLP-LTGIL--LSHVYG-----MRVNVVEI-EPDIAELSRKVIEG----LGVDGVNVIT---GDETVID 185 (298)
T ss_dssp TTCEEEEECCCSSC-HHHHH--HHHTTC-----CEEEEEES-SHHHHHHHHHHHHH----HTCCSEEEEE---SCGGGGG
T ss_pred CcCEEEEECCCccH-HHHHH--HHHccC-----CEEEEEEC-CHHHHHHHHHHHHh----cCCCCeEEEE---CchhhCC
Confidence 44578999988652 33332 354442 57999987 55666666555443 344 344433 2233332
Q ss_pred cccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEEee
Q 048129 237 EDKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVIIEV 282 (412)
Q Consensus 237 ~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~E~ 282 (412)
. .+=++|.++.. . .....+++.+ |.|+|.-.+++..
T Consensus 186 d-----~~FDvV~~~a~----~-~d~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 186 G-----LEFDVLMVAAL----A-EPKRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp G-----CCCSEEEECTT----C-SCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred C-----CCcCEEEECCC----c-cCHHHHHHHHHHHcCCCcEEEEEc
Confidence 1 12245555432 2 3344555555 7799988877743
No 184
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=31.18 E-value=75 Score=27.54 Aligned_cols=42 Identities=10% Similarity=0.025 Sum_probs=28.3
Q ss_pred CeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHH
Q 048129 158 KRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKR 210 (412)
Q Consensus 158 ~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~r 210 (412)
+.-+|+|+|.|.|.- ...|+.+ | .++|||+. +...++.+.++
T Consensus 22 ~~~~vLD~GCG~G~~----~~~la~~--g----~~V~gvD~-S~~~l~~a~~~ 63 (203)
T 1pjz_A 22 PGARVLVPLCGKSQD----MSWLSGQ--G----YHVVGAEL-SEAAVERYFTE 63 (203)
T ss_dssp TTCEEEETTTCCSHH----HHHHHHH--C----CEEEEEEE-CHHHHHHHHHH
T ss_pred CCCEEEEeCCCCcHh----HHHHHHC--C----CeEEEEeC-CHHHHHHHHHH
Confidence 445899999998843 3446665 3 37999997 55666655544
No 185
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=30.91 E-value=1e+02 Score=27.23 Aligned_cols=57 Identities=11% Similarity=0.190 Sum_probs=35.2
Q ss_pred HHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHH
Q 048129 149 AIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAY 213 (412)
Q Consensus 149 aIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~ 213 (412)
.|++.+.-...-+|+|+|.|.|.--..|.+.+ +| .-++|+++. +...++.+.+++..
T Consensus 87 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-----~~--~~~v~~~D~-~~~~~~~a~~~~~~ 143 (258)
T 2pwy_A 87 AMVTLLDLAPGMRVLEAGTGSGGLTLFLARAV-----GE--KGLVESYEA-RPHHLAQAERNVRA 143 (258)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHH-----CT--TSEEEEEES-CHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCCCEEEEECCCcCHHHHHHHHHh-----CC--CCEEEEEeC-CHHHHHHHHHHHHH
Confidence 45565554455689999999885333333333 22 258999987 55556666655544
No 186
>2ksn_A Ubiquitin domain-containing protein 2; UBTD2, DC-UBP, signaling protein; NMR {Homo sapiens}
Probab=30.89 E-value=64 Score=27.39 Aligned_cols=37 Identities=19% Similarity=0.239 Sum_probs=30.5
Q ss_pred cHHHHHHHHHHHHhcCCHHHHHHHHHHhccccCCCCCc
Q 048129 43 ELVHLLILCAEKIGSQQFDRASTLLDHCENFSSKIGNS 80 (412)
Q Consensus 43 ~l~~lLl~cA~Av~~~~~~~A~~lL~~l~~~~s~~G~~ 80 (412)
.+-+-|-+|++++++||.+.|+.||..-. +.-|+||-
T Consensus 57 EIW~ALraA~~~~e~~Dl~tAQ~IldaAg-Itvp~gdL 93 (137)
T 2ksn_A 57 EIWDALKAAAHAFESNDHELAQAIIDGAN-ITLPHGAL 93 (137)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHS-CBCSSCCS
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHcC-CcccCCcH
Confidence 47889999999999999999999997664 44567763
No 187
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=30.43 E-value=74 Score=29.99 Aligned_cols=68 Identities=12% Similarity=0.120 Sum_probs=43.9
Q ss_pred hHHHHHhhHHHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHH
Q 048129 140 QATLFAGTQAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFA 215 (412)
Q Consensus 140 ~fa~~taNqaIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA 215 (412)
++.|-+....|++.+.-...-.|+|+|.|.|.-=..|.+.+ || .-++++|+. +...++.+.+++.++-
T Consensus 87 ~~~~~~~~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~-----g~--~~~v~~vD~-~~~~~~~a~~~~~~~~ 154 (336)
T 2b25_A 87 AITFPKDINMILSMMDINPGDTVLEAGSGSGGMSLFLSKAV-----GS--QGRVISFEV-RKDHHDLAKKNYKHWR 154 (336)
T ss_dssp CCCCHHHHHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHH-----CT--TCEEEEEES-SHHHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHh-----CC--CceEEEEeC-CHHHHHHHHHHHHHhh
Confidence 34555545666776654455689999999986443333332 33 368999987 5566777777776654
No 188
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=30.32 E-value=1.1e+02 Score=27.65 Aligned_cols=59 Identities=10% Similarity=0.107 Sum_probs=36.6
Q ss_pred HHHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHH
Q 048129 148 QAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYF 214 (412)
Q Consensus 148 qaIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~f 214 (412)
..|++.+.-...-+|+|+|.|.|.-= ..|+.+- +| ..++|+++. +...++.+.+++.++
T Consensus 89 ~~i~~~~~~~~~~~vLdiG~G~G~~~----~~l~~~~-~~--~~~v~~vD~-~~~~~~~a~~~~~~~ 147 (280)
T 1i9g_A 89 AQIVHEGDIFPGARVLEAGAGSGALT----LSLLRAV-GP--AGQVISYEQ-RADHAEHARRNVSGC 147 (280)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHH----HHHHHHH-CT--TSEEEEECS-CHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCEEEEEcccccHHH----HHHHHHh-CC--CCEEEEEeC-CHHHHHHHHHHHHHh
Confidence 35556555444558999999988533 3444331 22 268999987 556666666665544
No 189
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=29.58 E-value=1.2e+02 Score=27.12 Aligned_cols=79 Identities=18% Similarity=0.228 Sum_probs=44.3
Q ss_pred CeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc--EEEEEeecCCCCCC
Q 048129 158 KRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP--FSFKIVLVTETKDL 235 (412)
Q Consensus 158 ~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~--Fef~~v~~~~~e~l 235 (412)
+.-.|+|+|.|.|. +...|+.+. + . +||||+. +...++.+.+++ +..|+. .+|.. .++.++
T Consensus 49 ~~~~vLDlG~G~G~----~~~~la~~~--~--~-~v~gvDi-~~~~~~~a~~n~----~~~~~~~~v~~~~---~D~~~~ 111 (259)
T 3lpm_A 49 RKGKIIDLCSGNGI----IPLLLSTRT--K--A-KIVGVEI-QERLADMAKRSV----AYNQLEDQIEIIE---YDLKKI 111 (259)
T ss_dssp SCCEEEETTCTTTH----HHHHHHTTC--C--C-EEEEECC-SHHHHHHHHHHH----HHTTCTTTEEEEC---SCGGGG
T ss_pred CCCEEEEcCCchhH----HHHHHHHhc--C--C-cEEEEEC-CHHHHHHHHHHH----HHCCCcccEEEEE---CcHHHh
Confidence 35589999999884 445677762 2 2 8999987 445555554443 445654 44433 233333
Q ss_pred ccccccCCCCceEEEeecc
Q 048129 236 NEDKFDLNAGEAVAVYSPI 254 (412)
Q Consensus 236 ~~~~l~~~~~E~laVn~~~ 254 (412)
... +.-..=+.|+.|-++
T Consensus 112 ~~~-~~~~~fD~Ii~npPy 129 (259)
T 3lpm_A 112 TDL-IPKERADIVTCNPPY 129 (259)
T ss_dssp GGT-SCTTCEEEEEECCCC
T ss_pred hhh-hccCCccEEEECCCC
Confidence 211 111222677777665
No 190
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=29.35 E-value=84 Score=28.25 Aligned_cols=50 Identities=12% Similarity=0.129 Sum_probs=34.0
Q ss_pred cCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHH
Q 048129 156 SAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYF 214 (412)
Q Consensus 156 g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~f 214 (412)
..+...|+|+|.|.|. ++..||.+. | ...++||+. +...++.+.+++.+.
T Consensus 44 ~~~~~~vLDiGcG~G~----~~~~la~~~---p-~~~v~GiDi-s~~~l~~A~~~~~~l 93 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGG----LLVELSPLF---P-DTLILGLEI-RVKVSDYVQDRIRAL 93 (235)
T ss_dssp --CCEEEEEETCTTCH----HHHHHGGGS---T-TSEEEEEES-CHHHHHHHHHHHHHH
T ss_pred cCCCCeEEEEccCCcH----HHHHHHHHC---C-CCeEEEEEC-CHHHHHHHHHHHHHH
Confidence 4456789999999885 445567663 2 368999997 666677777666554
No 191
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=29.23 E-value=79 Score=28.16 Aligned_cols=56 Identities=16% Similarity=0.034 Sum_probs=36.1
Q ss_pred CeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc--EEEEE
Q 048129 158 KRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP--FSFKI 226 (412)
Q Consensus 158 ~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~--Fef~~ 226 (412)
+.-+|+|+|.|.|.--..|.+.. | ..++|||+. +...++.+.+++ +..|++ .+|..
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~------~--~~~v~gvD~-s~~~~~~a~~~~----~~~~~~~~v~~~~ 122 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATL------N--GWYFLATEV-DDMCFNYAKKNV----EQNNLSDLIKVVK 122 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHH------H--CCEEEEEES-CHHHHHHHHHHH----HHTTCTTTEEEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhC------C--CCeEEEEEC-CHHHHHHHHHHH----HHcCCCccEEEEE
Confidence 45689999999997555554433 1 268999987 555566555554 345664 56654
No 192
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=29.02 E-value=1e+02 Score=26.36 Aligned_cols=105 Identities=13% Similarity=0.121 Sum_probs=56.2
Q ss_pred HHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc-EEEEEee
Q 048129 150 IIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP-FSFKIVL 228 (412)
Q Consensus 150 IleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~-Fef~~v~ 228 (412)
+++.+.-.+.-+|+|+|.|.|..= ..|+.+ + -++|+|+. +...++.+.+++. ..|++ .+|..-
T Consensus 69 ~~~~l~~~~~~~vLdiG~G~G~~~----~~la~~--~----~~v~~vD~-~~~~~~~a~~~~~----~~~~~~v~~~~~- 132 (210)
T 3lbf_A 69 MTELLELTPQSRVLEIGTGSGYQT----AILAHL--V----QHVCSVER-IKGLQWQARRRLK----NLDLHNVSTRHG- 132 (210)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHH----HHHHHH--S----SEEEEEES-CHHHHHHHHHHHH----HTTCCSEEEEES-
T ss_pred HHHhcCCCCCCEEEEEcCCCCHHH----HHHHHh--C----CEEEEEec-CHHHHHHHHHHHH----HcCCCceEEEEC-
Confidence 345555455668999999988633 334444 1 46899987 5555665555543 34554 444332
Q ss_pred cCCCCCCccccccCCCCceEEEeeccccCCCCchHHHHHHHHhcCCCEEEEEee
Q 048129 229 VTETKDLNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKMLRKISPCVMVIIEV 282 (412)
Q Consensus 229 ~~~~e~l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~vr~L~P~vvvl~E~ 282 (412)
+..+.... -.+=+.|+++..+.- .+. ...+.|+|.-.+++..
T Consensus 133 --d~~~~~~~---~~~~D~i~~~~~~~~-~~~------~~~~~L~pgG~lv~~~ 174 (210)
T 3lbf_A 133 --DGWQGWQA---RAPFDAIIVTAAPPE-IPT------ALMTQLDEGGILVLPV 174 (210)
T ss_dssp --CGGGCCGG---GCCEEEEEESSBCSS-CCT------HHHHTEEEEEEEEEEE
T ss_pred --CcccCCcc---CCCccEEEEccchhh-hhH------HHHHhcccCcEEEEEE
Confidence 22221111 112245555544322 111 3567888986666543
No 193
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=28.75 E-value=1.2e+02 Score=26.24 Aligned_cols=61 Identities=10% Similarity=0.034 Sum_probs=34.6
Q ss_pred HHHhhhh--cCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHH
Q 048129 149 AIIERVA--SAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAY 213 (412)
Q Consensus 149 aIleA~~--g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~ 213 (412)
.+++.+. -...-+|+|+|.|.|..-..|.+.+..+ ..| ..++|+|+. +...++.+.+++.+
T Consensus 69 ~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~--~~~-~~~v~~vD~-~~~~~~~a~~~~~~ 131 (227)
T 2pbf_A 69 LSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVL--ENK-NSYVIGLER-VKDLVNFSLENIKR 131 (227)
T ss_dssp HHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTT--TCT-TCEEEEEES-CHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhccc--CCC-CCEEEEEeC-CHHHHHHHHHHHHH
Confidence 3444442 2334589999999885433333322111 113 368999987 55666666665544
No 194
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=28.30 E-value=77 Score=28.71 Aligned_cols=96 Identities=13% Similarity=0.042 Sum_probs=49.9
Q ss_pred CeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCCCCcc
Q 048129 158 KRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVLVTETKDLNE 237 (412)
Q Consensus 158 ~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~~~~~e~l~~ 237 (412)
..-+|+|+|.|.|. +...++.+ |+ ++|||+. +...++.+.++ ++..|++.+|.. .++.+.
T Consensus 120 ~~~~VLDiGcG~G~----l~~~la~~--g~----~v~gvDi-~~~~v~~a~~n----~~~~~~~v~~~~---~d~~~~-- 179 (254)
T 2nxc_A 120 PGDKVLDLGTGSGV----LAIAAEKL--GG----KALGVDI-DPMVLPQAEAN----AKRNGVRPRFLE---GSLEAA-- 179 (254)
T ss_dssp TTCEEEEETCTTSH----HHHHHHHT--TC----EEEEEES-CGGGHHHHHHH----HHHTTCCCEEEE---SCHHHH--
T ss_pred CCCEEEEecCCCcH----HHHHHHHh--CC----eEEEEEC-CHHHHHHHHHH----HHHcCCcEEEEE---CChhhc--
Confidence 34589999999885 33445554 33 7999987 44445555544 344566633332 222221
Q ss_pred ccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEE
Q 048129 238 DKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVII 280 (412)
Q Consensus 238 ~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~ 280 (412)
+.-.+=+.|+.|... .....++..+ +.|+|.-.+++
T Consensus 180 --~~~~~fD~Vv~n~~~-----~~~~~~l~~~~~~LkpgG~lil 216 (254)
T 2nxc_A 180 --LPFGPFDLLVANLYA-----ELHAALAPRYREALVPGGRALL 216 (254)
T ss_dssp --GGGCCEEEEEEECCH-----HHHHHHHHHHHHHEEEEEEEEE
T ss_pred --CcCCCCCEEEECCcH-----HHHHHHHHHHHHHcCCCCEEEE
Confidence 111122455555432 1233444444 55777655554
No 195
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=28.03 E-value=1.6e+02 Score=25.65 Aligned_cols=53 Identities=9% Similarity=0.134 Sum_probs=34.5
Q ss_pred eeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHH
Q 048129 159 RIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYF 214 (412)
Q Consensus 159 ~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~f 214 (412)
.-+|+|+|.|.|..=..|.+.+... +..| .-++|+|+. +...++.+.+++.+.
T Consensus 85 ~~~VLdiG~G~G~~~~~la~~~~~~-~~~~-~~~v~~vD~-~~~~~~~a~~~~~~~ 137 (227)
T 1r18_A 85 GARILDVGSGSGYLTACFYRYIKAK-GVDA-DTRIVGIEH-QAELVRRSKANLNTD 137 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHHHS-CCCT-TCEEEEEES-CHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCccHHHHHHHHhcccc-cCCc-cCEEEEEEc-CHHHHHHHHHHHHhc
Confidence 4589999999887655555544322 1222 368999987 556677777666553
No 196
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=28.01 E-value=1.1e+02 Score=28.57 Aligned_cols=86 Identities=10% Similarity=0.053 Sum_probs=47.0
Q ss_pred HHHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc-EEEEE
Q 048129 148 QAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP-FSFKI 226 (412)
Q Consensus 148 qaIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~-Fef~~ 226 (412)
+.|++++.-...-.|+|+|.|.|.-- ..|+.+ + -++|||+. +...++.+.+++. ..|++ ++|..
T Consensus 32 ~~i~~~~~~~~~~~VLDiG~G~G~lt----~~La~~--~----~~v~~vDi-~~~~~~~a~~~~~----~~~~~~v~~~~ 96 (299)
T 2h1r_A 32 DKIIYAAKIKSSDIVLEIGCGTGNLT----VKLLPL--A----KKVITIDI-DSRMISEVKKRCL----YEGYNNLEVYE 96 (299)
T ss_dssp HHHHHHHCCCTTCEEEEECCTTSTTH----HHHTTT--S----SEEEEECS-CHHHHHHHHHHHH----HTTCCCEEC--
T ss_pred HHHHHhcCCCCcCEEEEEcCcCcHHH----HHHHhc--C----CEEEEEEC-CHHHHHHHHHHHH----HcCCCceEEEE
Confidence 44555555444558999999999744 455655 2 36999987 5455555554442 33442 33332
Q ss_pred eecCCCCCCccccccCCCCceEEEeecccc
Q 048129 227 VLVTETKDLNEDKFDLNAGEAVAVYSPILL 256 (412)
Q Consensus 227 v~~~~~e~l~~~~l~~~~~E~laVn~~~~L 256 (412)
.+..++... .=+.|+.|.++..
T Consensus 97 ---~D~~~~~~~-----~~D~Vv~n~py~~ 118 (299)
T 2h1r_A 97 ---GDAIKTVFP-----KFDVCTANIPYKI 118 (299)
T ss_dssp -----CCSSCCC-----CCSEEEEECCGGG
T ss_pred ---CchhhCCcc-----cCCEEEEcCCccc
Confidence 223233221 2257777877654
No 197
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=27.80 E-value=82 Score=26.21 Aligned_cols=40 Identities=20% Similarity=0.331 Sum_probs=26.7
Q ss_pred eEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEeecCCCC
Q 048129 190 LLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVLVTETK 233 (412)
Q Consensus 190 ~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~~~~~e 233 (412)
.++|||+ +...-++....-.+.++.+|+...|..+. .+++
T Consensus 125 ~i~itgv---peqvrkelakeaerl~~efni~v~y~imt-gsle 164 (170)
T 4hhu_A 125 VIVITGV---PEQVRKELAKEAERLKAEFNINVQYQIMT-GSLE 164 (170)
T ss_dssp EEEEESC---CHHHHHHHHHHHHHHHHHHTCEEEEEEEE-TTEE
T ss_pred EEEEeCC---cHHHHHHHHHHHHHHHHhcceEEEEEEEe-ccee
Confidence 5899998 33433444444555667789999999885 4543
No 198
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=27.09 E-value=80 Score=28.07 Aligned_cols=105 Identities=8% Similarity=0.076 Sum_probs=54.5
Q ss_pred cCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc---EEEEEeecCCC
Q 048129 156 SAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP---FSFKIVLVTET 232 (412)
Q Consensus 156 g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~---Fef~~v~~~~~ 232 (412)
..+.-+|+|+|.|.|.-=..|.+++ || .-+||+|+. +...++.+.+ .++..|+. .+|.. .+.
T Consensus 54 ~~~~~~vLdiG~G~G~~~~~la~~~------~~-~~~v~~vD~-~~~~~~~a~~----~~~~~g~~~~~i~~~~---gda 118 (221)
T 3dr5_A 54 GNGSTGAIAITPAAGLVGLYILNGL------AD-NTTLTCIDP-ESEHQRQAKA----LFREAGYSPSRVRFLL---SRP 118 (221)
T ss_dssp CTTCCEEEEESTTHHHHHHHHHHHS------CT-TSEEEEECS-CHHHHHHHHH----HHHHTTCCGGGEEEEC---SCH
T ss_pred CCCCCCEEEEcCCchHHHHHHHHhC------CC-CCEEEEEEC-CHHHHHHHHH----HHHHcCCCcCcEEEEE---cCH
Confidence 3345589999998875444444433 23 268999987 4444544443 44556665 44433 222
Q ss_pred CCCccccccCCCCceEEEeeccccCCCCchHHHHHH-HHhcCCCEEEEEe
Q 048129 233 KDLNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKM-LRKISPCVMVIIE 281 (412)
Q Consensus 233 e~l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~-vr~L~P~vvvl~E 281 (412)
.++-+. +.-.+=+.|+++.. ......+++. .+.|+|.-+++++
T Consensus 119 ~~~l~~-~~~~~fD~V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~d 162 (221)
T 3dr5_A 119 LDVMSR-LANDSYQLVFGQVS-----PMDLKALVDAAWPLLRRGGALVLA 162 (221)
T ss_dssp HHHGGG-SCTTCEEEEEECCC-----TTTHHHHHHHHHHHEEEEEEEEET
T ss_pred HHHHHH-hcCCCcCeEEEcCc-----HHHHHHHHHHHHHHcCCCcEEEEe
Confidence 111110 10011134444322 2334445554 4788999888874
No 199
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=26.91 E-value=52 Score=30.00 Aligned_cols=52 Identities=13% Similarity=0.029 Sum_probs=42.5
Q ss_pred chHHHHHHHHhcCCCEEEEEeecCcCCCCchHHHHHHHHHHHHHHHHHhhhh
Q 048129 261 HPDFLIKMLRKISPCVMVIIEVEANHNSQNFEDRFFEVLFHYSASFDCLKVS 312 (412)
Q Consensus 261 ~~~~~L~~vr~L~P~vvvl~E~ea~~n~~~F~~RF~eaL~~YsalFdsLda~ 312 (412)
+.+.+++.+++.+.+..+.+|.+.......-.+-+.+++.|...+++.+..|
T Consensus 239 d~~~~~~~L~~~gy~g~~~lE~~~~~~~~~~~~~~~~s~~~l~~l~~~~~~~ 290 (290)
T 3tva_A 239 GMEAYLTTLWEIGYRGPLTIEREIPHDPVQQKKDLASALELLTGLRKKIANC 290 (290)
T ss_dssp CHHHHHHHHHHTTCCSCEEECCCCTTSHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHcCCCCcEEEEEecCCChhhHHHHHHHHHHHHHHHHHHhcCC
Confidence 5678999999999999999998876532346888999999999998887543
No 200
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=26.43 E-value=1.1e+02 Score=25.11 Aligned_cols=50 Identities=18% Similarity=0.198 Sum_probs=34.8
Q ss_pred eEEEecccC-CccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcE
Q 048129 160 IHLIDLAIR-SGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPF 222 (412)
Q Consensus 160 vHIID~~i~-~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~F 222 (412)
-=|||++-. ...+|..|++.|..+. |++-||...+.. .+.+.|+..|+|+
T Consensus 49 PVVlDl~~l~~~~dl~~L~~~l~~~g------l~~vGV~g~~~~-------~~~~~a~~~GLp~ 99 (120)
T 3ghf_A 49 PVVINVSGLESPVNWPELHKIVTSTG------LRIIGVSGCKDA-------SLKVEIDRMGLPL 99 (120)
T ss_dssp EEEEEEEECCSSCCHHHHHHHHHTTT------CEEEEEESCCCH-------HHHHHHHHHTCCE
T ss_pred cEEEEccccCChHHHHHHHHHHHHcC------CEEEEEeCCCcH-------HHHHHHHHCCCCc
Confidence 347887743 4589999999998772 888888652222 2446677889984
No 201
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=26.05 E-value=59 Score=30.88 Aligned_cols=47 Identities=15% Similarity=0.331 Sum_probs=33.6
Q ss_pred eeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHH
Q 048129 159 RIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYF 214 (412)
Q Consensus 159 ~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~f 214 (412)
.=+|+|.|.|.|..-..|.+.+ | .-++|||+. +...++.+.+++..+
T Consensus 27 g~~vLD~g~G~G~~s~~la~~~------~--~~~VigvD~-d~~al~~A~~~~~~~ 73 (301)
T 1m6y_A 27 EKIILDCTVGEGGHSRAILEHC------P--GCRIIGIDV-DSEVLRIAEEKLKEF 73 (301)
T ss_dssp TCEEEETTCTTSHHHHHHHHHC------T--TCEEEEEES-CHHHHHHHHHHTGGG
T ss_pred CCEEEEEeCCcCHHHHHHHHHC------C--CCEEEEEEC-CHHHHHHHHHHHHhc
Confidence 3479999999987766555543 2 257999987 667787777776543
No 202
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=23.96 E-value=95 Score=28.27 Aligned_cols=107 Identities=13% Similarity=0.152 Sum_probs=53.2
Q ss_pred HHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhc-CCc-EEEEE
Q 048129 149 AIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETW-NLP-FSFKI 226 (412)
Q Consensus 149 aIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~l-gv~-Fef~~ 226 (412)
.+++.+.-...-.|+|+|.|.|.--..|.+.+ + | ..++|+|+. +...++.+.+++ +.. |++ .+|..
T Consensus 101 ~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~-----~-~-~~~v~~vD~-s~~~~~~a~~~~----~~~~g~~~v~~~~ 168 (275)
T 1yb2_A 101 YIIMRCGLRPGMDILEVGVGSGNMSSYILYAL-----N-G-KGTLTVVER-DEDNLKKAMDNL----SEFYDIGNVRTSR 168 (275)
T ss_dssp -----CCCCTTCEEEEECCTTSHHHHHHHHHH-----T-T-SSEEEEECS-CHHHHHHHHHHH----HTTSCCTTEEEEC
T ss_pred HHHHHcCCCCcCEEEEecCCCCHHHHHHHHHc-----C-C-CCEEEEEEC-CHHHHHHHHHHH----HhcCCCCcEEEEE
Confidence 45555544455689999999886444443333 1 2 268999987 545555554443 444 543 44433
Q ss_pred eecCCCCCCccccccCCCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEEe
Q 048129 227 VLVTETKDLNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVIIE 281 (412)
Q Consensus 227 v~~~~~e~l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~E 281 (412)
- +..+. +.-..=+.|+.+ .+.+ +.+|+.+ +.|+|.-.+++.
T Consensus 169 ~---d~~~~----~~~~~fD~Vi~~------~~~~-~~~l~~~~~~LkpgG~l~i~ 210 (275)
T 1yb2_A 169 S---DIADF----ISDQMYDAVIAD------IPDP-WNHVQKIASMMKPGSVATFY 210 (275)
T ss_dssp S---CTTTC----CCSCCEEEEEEC------CSCG-GGSHHHHHHTEEEEEEEEEE
T ss_pred C---chhcc----CcCCCccEEEEc------CcCH-HHHHHHHHHHcCCCCEEEEE
Confidence 2 22221 110111344432 2233 3556655 558998666553
No 203
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=23.69 E-value=85 Score=27.21 Aligned_cols=103 Identities=10% Similarity=0.099 Sum_probs=55.0
Q ss_pred eeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc--EEEEEeecCCCCCCc
Q 048129 159 RIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP--FSFKIVLVTETKDLN 236 (412)
Q Consensus 159 ~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~--Fef~~v~~~~~e~l~ 236 (412)
.-+|+|+|.|.|.-- ..|+.+- |+ ..++|+|+. +...++.+.++ ++..|+. .+|..- +..+.-
T Consensus 65 ~~~vLdiG~G~G~~~----~~la~~~--~~-~~~v~~vD~-~~~~~~~a~~~----~~~~~~~~~v~~~~~---d~~~~~ 129 (225)
T 3tr6_A 65 AKKVIDIGTFTGYSA----IAMGLAL--PK-DGTLITCDV-DEKSTALAKEY----WEKAGLSDKIGLRLS---PAKDTL 129 (225)
T ss_dssp CSEEEEECCTTSHHH----HHHHTTC--CT-TCEEEEEES-CHHHHHHHHHH----HHHTTCTTTEEEEES---CHHHHH
T ss_pred CCEEEEeCCcchHHH----HHHHHhC--CC-CCEEEEEeC-CHHHHHHHHHH----HHHCCCCCceEEEeC---CHHHHH
Confidence 348999999988533 3444442 22 378999987 54555555444 3445654 555432 221111
Q ss_pred cccccC----CCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEEee
Q 048129 237 EDKFDL----NAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVIIEV 282 (412)
Q Consensus 237 ~~~l~~----~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~E~ 282 (412)
+. +.- ..=+.|+++.. ......+++.+ +.|+|.-+++++.
T Consensus 130 ~~-~~~~~~~~~fD~v~~~~~-----~~~~~~~l~~~~~~L~pgG~lv~~~ 174 (225)
T 3tr6_A 130 AE-LIHAGQAWQYDLIYIDAD-----KANTDLYYEESLKLLREGGLIAVDN 174 (225)
T ss_dssp HH-HHTTTCTTCEEEEEECSC-----GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HH-hhhccCCCCccEEEECCC-----HHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 11 000 11134444332 22344556555 7889998888753
No 204
>1in0_A YAJQ protein, HI1034; alpha and beta sandwich, structural genomics, structure 2 function project, S2F, unknown function; 2.14A {Haemophilus influenzae} SCOP: d.58.49.1 d.58.49.1
Probab=23.64 E-value=77 Score=27.73 Aligned_cols=33 Identities=15% Similarity=0.299 Sum_probs=26.7
Q ss_pred eEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEe
Q 048129 190 LLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIV 227 (412)
Q Consensus 190 ~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v 227 (412)
.||+||= +.+.|+++-..|.+ ..+|+|++|.-.
T Consensus 129 ~vRVtgK---krDDLQ~viallk~--~d~~~plQF~Nf 161 (163)
T 1in0_A 129 QVRVTGK---SRDDLQAVIQLVKS--AELGQPFQFNNF 161 (163)
T ss_dssp EEEEEES---CHHHHHHHHHHHHH--SCCSSCCEEEEE
T ss_pred EEEEecC---CHHHHHHHHHHHHh--cCCCCCeeeccC
Confidence 5999984 56789999888875 479999999753
No 205
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=22.57 E-value=1.6e+02 Score=29.61 Aligned_cols=54 Identities=11% Similarity=0.076 Sum_probs=38.4
Q ss_pred HHHHHhhHHHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecC
Q 048129 141 ATLFAGTQAIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGS 198 (412)
Q Consensus 141 fa~~taNqaIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~ 198 (412)
|+...|++ |.+..+....++||++|-|.|.==..+++.|.... +.+ .+++-|+.
T Consensus 121 FGe~la~~-~~~~~~~~g~~~ivE~GaG~GtLa~DiL~~l~~~~--~~~-~~y~iVE~ 174 (432)
T 4f3n_A 121 FAQTLARP-VAQALDASGTRRVMEFGAGTGKLAAGLLTALAALG--VEL-DEYAIVDL 174 (432)
T ss_dssp HHHHHHHH-HHHHHHHHTCCEEEEESCTTSHHHHHHHHHHHHTT--CCC-SEEEEECT
T ss_pred HHHHHHHH-HHHHHHhcCCCeEEEeCCCccHHHHHHHHHHHhcC--CCC-ceEEEEEc
Confidence 56667777 44544422279999999999998888999997653 322 47777876
No 206
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=21.56 E-value=1.7e+02 Score=25.50 Aligned_cols=54 Identities=15% Similarity=0.196 Sum_probs=34.6
Q ss_pred CeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCC--cEEEEE
Q 048129 158 KRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNL--PFSFKI 226 (412)
Q Consensus 158 ~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv--~Fef~~ 226 (412)
..-+|+|+|.|.|. +...|+.+ | .++|||+. +...++.+.++ ++..|+ ..+|..
T Consensus 78 ~~~~vLD~gcG~G~----~~~~la~~--~----~~v~~vD~-s~~~~~~a~~~----~~~~~~~~~~~~~~ 133 (241)
T 3gdh_A 78 KCDVVVDAFCGVGG----NTIQFALT--G----MRVIAIDI-DPVKIALARNN----AEVYGIADKIEFIC 133 (241)
T ss_dssp CCSEEEETTCTTSH----HHHHHHHT--T----CEEEEEES-CHHHHHHHHHH----HHHTTCGGGEEEEE
T ss_pred CCCEEEECccccCH----HHHHHHHc--C----CEEEEEEC-CHHHHHHHHHH----HHHcCCCcCeEEEE
Confidence 45689999999884 34445554 2 57999987 54555555444 455676 455554
No 207
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=20.97 E-value=2.2e+02 Score=26.05 Aligned_cols=43 Identities=12% Similarity=0.201 Sum_probs=31.7
Q ss_pred cCCeeEEEecccCCccchHHHHHHH---Hh-CCCCCCceEEEEEecC
Q 048129 156 SAKRIHLIDLAIRSGSHCIVLMQAL---AT-RQECPVELLKITAVGS 198 (412)
Q Consensus 156 g~~~vHIID~~i~~G~QWp~LiqaL---a~-R~~gpp~~LrIT~I~~ 198 (412)
+.+..+|.|+|.|.|..=..++++. .. .|.++-..+++++|+.
T Consensus 58 ~~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~ 104 (257)
T 2qy6_A 58 PHPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEK 104 (257)
T ss_dssp SSSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEES
T ss_pred CCCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEEC
Confidence 6678999999999998877777765 22 3433212599999986
No 208
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=20.97 E-value=1.3e+02 Score=26.35 Aligned_cols=108 Identities=9% Similarity=0.096 Sum_probs=55.1
Q ss_pred HHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc-EEEEEe
Q 048129 149 AIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP-FSFKIV 227 (412)
Q Consensus 149 aIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~-Fef~~v 227 (412)
.+++.+.-...-.|+|+|.|.|..-..| +.+. + .++|+|+. +...++.+.+++. ..|++ .+|..-
T Consensus 82 ~~~~~l~~~~~~~vLdiG~G~G~~~~~l----a~~~--~---~~v~~vD~-~~~~~~~a~~~~~----~~~~~~v~~~~~ 147 (235)
T 1jg1_A 82 IMLEIANLKPGMNILEVGTGSGWNAALI----SEIV--K---TDVYTIER-IPELVEFAKRNLE----RAGVKNVHVILG 147 (235)
T ss_dssp HHHHHHTCCTTCCEEEECCTTSHHHHHH----HHHH--C---SCEEEEES-CHHHHHHHHHHHH----HTTCCSEEEEES
T ss_pred HHHHhcCCCCCCEEEEEeCCcCHHHHHH----HHHh--C---CEEEEEeC-CHHHHHHHHHHHH----HcCCCCcEEEEC
Confidence 4455554344457999999988644433 3332 1 36899986 4455555555443 34543 444332
Q ss_pred ecCCCCCCccccccCCCCceEEEeeccccCCCCchHHHHHHHHhcCCCEEEEEeec
Q 048129 228 LVTETKDLNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKMLRKISPCVMVIIEVE 283 (412)
Q Consensus 228 ~~~~~e~l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~vr~L~P~vvvl~E~e 283 (412)
.. ...+.. -.+=+.|+++..+.- .+ + ...+.|+|.-.+++.-.
T Consensus 148 d~--~~~~~~----~~~fD~Ii~~~~~~~-~~---~---~~~~~L~pgG~lvi~~~ 190 (235)
T 1jg1_A 148 DG--SKGFPP----KAPYDVIIVTAGAPK-IP---E---PLIEQLKIGGKLIIPVG 190 (235)
T ss_dssp CG--GGCCGG----GCCEEEEEECSBBSS-CC---H---HHHHTEEEEEEEEEEEC
T ss_pred Cc--ccCCCC----CCCccEEEECCcHHH-HH---H---HHHHhcCCCcEEEEEEe
Confidence 11 111111 011256666554421 11 1 45677888877666543
No 209
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=20.83 E-value=1.3e+02 Score=26.08 Aligned_cols=105 Identities=12% Similarity=0.127 Sum_probs=53.7
Q ss_pred HHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCcEEEEEee
Q 048129 149 AIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLPFSFKIVL 228 (412)
Q Consensus 149 aIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~Fef~~v~ 228 (412)
.|++.+.-...-+|+|+|.|.|.-- ..|+.+. -++|||+. +...++.+.+++ +..| ..+|...
T Consensus 61 ~~~~~~~~~~~~~vLdiG~G~G~~~----~~l~~~~------~~v~~vD~-~~~~~~~a~~~~----~~~~-~v~~~~~- 123 (231)
T 1vbf_A 61 FMLDELDLHKGQKVLEIGTGIGYYT----ALIAEIV------DKVVSVEI-NEKMYNYASKLL----SYYN-NIKLILG- 123 (231)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHH----HHHHHHS------SEEEEEES-CHHHHHHHHHHH----TTCS-SEEEEES-
T ss_pred HHHHhcCCCCCCEEEEEcCCCCHHH----HHHHHHc------CEEEEEeC-CHHHHHHHHHHH----hhcC-CeEEEEC-
Confidence 3444444344558999999988633 3444432 36999987 545555554443 3334 4444332
Q ss_pred cCCCCCCccccccCCCCceEEEeeccccCCCCchHHHHHHHHhcCCCEEEEEee
Q 048129 229 VTETKDLNEDKFDLNAGEAVAVYSPILLSRTRHPDFLIKMLRKISPCVMVIIEV 282 (412)
Q Consensus 229 ~~~~e~l~~~~l~~~~~E~laVn~~~~L~~~~~~~~~L~~vr~L~P~vvvl~E~ 282 (412)
+..+..+. -.+=+.|+++..+.- .+ + ...+.|+|.-.+++..
T Consensus 124 --d~~~~~~~---~~~fD~v~~~~~~~~-~~---~---~~~~~L~pgG~l~~~~ 165 (231)
T 1vbf_A 124 --DGTLGYEE---EKPYDRVVVWATAPT-LL---C---KPYEQLKEGGIMILPI 165 (231)
T ss_dssp --CGGGCCGG---GCCEEEEEESSBBSS-CC---H---HHHHTEEEEEEEEEEE
T ss_pred --Cccccccc---CCCccEEEECCcHHH-HH---H---HHHHHcCCCcEEEEEE
Confidence 22221110 112245555544321 11 1 3557889987666543
No 210
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=20.79 E-value=1.8e+02 Score=25.58 Aligned_cols=100 Identities=15% Similarity=0.171 Sum_probs=54.2
Q ss_pred eeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHHHHHHHHhcCCc-EEEEEeecCCCCCCcc
Q 048129 159 RIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKRLAYFAETWNLP-FSFKIVLVTETKDLNE 237 (412)
Q Consensus 159 ~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~rL~~fA~~lgv~-Fef~~v~~~~~e~l~~ 237 (412)
.-+|+|+|.|.|.-=.. ||.+. | ..++|||+. +...++.+.+ .++..|++ .+|.. .+.+++..
T Consensus 71 ~~~vLDiG~G~G~~~~~----la~~~---~-~~~v~~vD~-s~~~~~~a~~----~~~~~~~~~v~~~~---~d~~~~~~ 134 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLP----IKICF---P-HLHVTIVDS-LNKRITFLEK----LSEALQLENTTFCH---DRAETFGQ 134 (240)
T ss_dssp CCEEEEECSSSCTTHHH----HHHHC---T-TCEEEEEES-CHHHHHHHHH----HHHHHTCSSEEEEE---SCHHHHTT
T ss_pred CCEEEEecCCCCHHHHH----HHHhC---C-CCEEEEEeC-CHHHHHHHHH----HHHHcCCCCEEEEe---ccHHHhcc
Confidence 45899999998863222 33221 2 268999987 4444444443 34455664 44443 23333321
Q ss_pred ccccC-CCCceEEEeeccccCCCCchHHHHHHH-HhcCCCEEEEEe
Q 048129 238 DKFDL-NAGEAVAVYSPILLSRTRHPDFLIKML-RKISPCVMVIIE 281 (412)
Q Consensus 238 ~~l~~-~~~E~laVn~~~~L~~~~~~~~~L~~v-r~L~P~vvvl~E 281 (412)
.. .. ..=+.|+.+. ....+.+++.+ +-|+|.-.+++.
T Consensus 135 ~~-~~~~~fD~V~~~~------~~~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 135 RK-DVRESYDIVTARA------VARLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp CT-TTTTCEEEEEEEC------CSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred cc-cccCCccEEEEec------cCCHHHHHHHHHHhcCCCCEEEEE
Confidence 00 00 1113333332 14567788887 778998877764
No 211
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=20.68 E-value=1.5e+02 Score=27.71 Aligned_cols=55 Identities=13% Similarity=0.186 Sum_probs=34.7
Q ss_pred HHHhhhhcCCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHHHH
Q 048129 149 AIIERVASAKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETGKR 210 (412)
Q Consensus 149 aIleA~~g~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg~r 210 (412)
.|++++.-...-+|+|+|.|.|.-=..|.+.. +....++|||+. +...++.+.++
T Consensus 33 ~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~------~~~~~~V~avDi-d~~~l~~a~~~ 87 (279)
T 3uzu_A 33 AIVAAIRPERGERMVEIGPGLGALTGPVIARL------ATPGSPLHAVEL-DRDLIGRLEQR 87 (279)
T ss_dssp HHHHHHCCCTTCEEEEECCTTSTTHHHHHHHH------CBTTBCEEEEEC-CHHHHHHHHHH
T ss_pred HHHHhcCCCCcCEEEEEccccHHHHHHHHHhC------CCcCCeEEEEEC-CHHHHHHHHHh
Confidence 36666654556689999999998655554432 110256999987 54555555444
No 212
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=20.05 E-value=1.3e+02 Score=26.85 Aligned_cols=43 Identities=19% Similarity=0.269 Sum_probs=27.0
Q ss_pred CCeeEEEecccCCccchHHHHHHHHhCCCCCCceEEEEEecCCChHHHHHHH
Q 048129 157 AKRIHLIDLAIRSGSHCIVLMQALATRQECPVELLKITAVGSSSKQRMEETG 208 (412)
Q Consensus 157 ~~~vHIID~~i~~G~QWp~LiqaLa~R~~gpp~~LrIT~I~~~~~~~l~~tg 208 (412)
...-+|+|+|.|.|.--.. |+.+- | . .++|||+. +...++.+.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~----l~~~~--~-~-~~v~~vD~-s~~~~~~a~ 126 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHA----FADAL--P-E-ITTFGLDV-SKVAIKAAA 126 (269)
T ss_dssp TTCCEEEEETCTTSTTHHH----HHHTC--T-T-SEEEEEES-CHHHHHHHH
T ss_pred CCCCEEEEECCCCCHHHHH----HHHhC--C-C-CeEEEEeC-CHHHHHHHH
Confidence 3456899999998865443 44442 1 1 47999987 544454443
Done!