BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048131
(124 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LG89|BABL_ARATH Basic blue protein OS=Arabidopsis thaliana GN=ARPN PE=1 SV=2
Length = 129
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 81/127 (63%), Gaps = 7/127 (5%)
Query: 1 MAQARGSA------IIAVVTVLLLLMHCNIGSATTFKVGDDGGWVFGVQNWPEGKTFKCG 54
MA+ RGSA I+ ++ V +LL+ + A T+ VGD G W F WP+GK F+ G
Sbjct: 1 MAKGRGSASWSARAIVTLMAVSVLLLQADYVQAATYTVGDSGIWTFNAVGWPKGKHFRAG 60
Query: 55 DILEFNYDPQRHNVIIVDQEGHDSCKPASDAKKFQTGKDQIVLNHGKNFFICGVPTHCSD 114
D+L FNY+P+ HNV+ VD +++CK + AK + +GKD+I L+ G+NFFIC P HC +
Sbjct: 61 DVLVFNYNPRMHNVVKVDSGSYNNCKTPTGAKPYTSGKDRITLSKGQNFFICNFPNHC-E 119
Query: 115 HGMKLEI 121
MK+ +
Sbjct: 120 SDMKIAV 126
>sp|P60496|BABL_LILLO Chemocyanin OS=Lilium longiflorum PE=1 SV=1
Length = 126
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 77/126 (61%), Gaps = 4/126 (3%)
Query: 1 MAQARGSAIIAVVTVLLLLM---HCNIGSATTFKVGDDGGWVFGVQNWPEGKTFKCGDIL 57
MAQ GSA A+V ++L+ +C + + + VGD GGW FG WP GKTF+ GD+L
Sbjct: 1 MAQGSGSAERALVLGVVLVFLVFNCEVAESVVYTVGDGGGWTFGTSGWPAGKTFRAGDVL 60
Query: 58 EFNYDPQRHNVIIVDQEGHDSCKPASDAKKFQTGKDQIVLNHGKNFFICGVPTHCSDHGM 117
F Y+P HNV+ V G+ SC + ++ F++G D+I L+ G N+FIC VP HC G+
Sbjct: 61 VFKYNPAVHNVVSVPAGGYKSCTASPGSRVFKSGDDRITLSRGTNYFICSVPGHC-QGGL 119
Query: 118 KLEINV 123
K+ +
Sbjct: 120 KIAVTA 125
>sp|P00303|BABL_CUCSA Basic blue protein OS=Cucumis sativus PE=1 SV=1
Length = 96
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 63/94 (67%), Gaps = 1/94 (1%)
Query: 30 FKVGDDGGWVFGVQNWPEGKTFKCGDILEFNYDPQRHNVIIVDQEGHDSCKPASDAKKFQ 89
+ VG GGW F ++WP+GK F+ GDIL FNY+P HNV++V+Q G +C + AK +
Sbjct: 3 YVVGGSGGWTFNTESWPKGKRFRAGDILLFNYNPXMHNVVVVNQGGFSTCNTPAGAKVYT 62
Query: 90 TGKDQIVLNHGKNFFICGVPTHCSDHGMKLEINV 123
+G+DQI L G+++FIC P HC GMK+ +N
Sbjct: 63 SGRDQIKLPKGQSYFICNFPGHCQS-GMKIAVNA 95
>sp|P80728|MAVI_CUCPE Mavicyanin OS=Cucurbita pepo PE=1 SV=1
Length = 108
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 27 ATTFKVGDDGGWV----FGVQNWPEGKTFKCGDILEFNYDPQRHNVIIVDQEGHDSCKPA 82
AT KVGD GW + W F GD L FNY+ + HNV+ VDQE SC +
Sbjct: 1 ATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSS 60
Query: 83 SDAKKFQTGKDQIVLNH-GKNFFICGVPTHCSDHGMKLEINVE 124
S A + +G D I L G +F+CG+P HC G K+EI V+
Sbjct: 61 SPAASYTSGADSIPLKRPGTFYFLCGIPGHC-QLGQKVEIKVD 102
>sp|Q41001|BCP_PEA Blue copper protein OS=Pisum sativum PE=2 SV=1
Length = 189
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
Query: 12 VVTVLLLLMHCNIGS-ATTFKVGDDGGWVFG--VQNWPEGKTFKCGDILEFNYDPQRHNV 68
V+ LL +++ + S AT + VGD GWV G W KTF GD L FNY H V
Sbjct: 8 VLCFLLAIINMALPSLATVYTVGDTSGWVIGGDYSTWASDKTFAVGDSLVFNYGAGAHTV 67
Query: 69 IIVDQEGHDSCKPASDAKKFQTGKDQIVLNH-GKNFFICGVPTHCSDHGMKLEINVE 124
V + + SC + TG I L GK++FICGVP H S GMKL I V+
Sbjct: 68 DEVKESDYKSCTSGNSISTDSTGATTIPLKKAGKHYFICGVPGH-STGGMKLSIKVK 123
>sp|O80517|BCB2_ARATH Uclacyanin-2 OS=Arabidopsis thaliana GN=At2g44790 PE=1 SV=1
Length = 202
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Query: 38 WVFGV--QNWPEGKTFKCGDILEFNYDPQRHNVIIVDQEGHDSCKPASDAKKFQTGKDQI 95
W GV W GKTF+ GDILEF Y H V +VD+ G+D C +S + G +I
Sbjct: 36 WTTGVDYSGWATGKTFRVGDILEFKYG-SSHTVDVVDKAGYDGCDASSSTENHSDGDTKI 94
Query: 96 VLNH-GKNFFICGVPTHC-SDHGMKLEINV 123
L G N+FIC P HC ++ GMKL +NV
Sbjct: 95 DLKTVGINYFICSTPGHCRTNGGMKLAVNV 124
>sp|P00302|STEL_TOXVR Stellacyanin OS=Toxicodendron vernicifluum PE=1 SV=1
Length = 107
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 57/104 (54%), Gaps = 9/104 (8%)
Query: 28 TTFKVGDDGGW---VFGVQN----WPEGKTFKCGDILEFNYDPQRHNVIIVDQEGHDSCK 80
T + VGD GW FG + W KTF GD+L F YD + HNV V Q+ + SC
Sbjct: 1 TVYTVGDSAGWKVPFFGDVDYDWKWASNKTFHIGDVLVFKYDRRFHNVDKVTQKNYQSCN 60
Query: 81 PASDAKKFQTGKDQIVLNH-GKNFFICGVPTHCSDHGMKLEINV 123
+ + TG B+I L G+ ++ICGVP HC D G K+ INV
Sbjct: 61 DTTPIASYNTGBBRINLKTVGQKYYICGVPKHC-DLGQKVHINV 103
>sp|Q07488|BCB1_ARATH Blue copper protein OS=Arabidopsis thaliana GN=BCB PE=1 SV=2
Length = 196
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 30 FKVGDDGGWVFGV-----QNWPEGKTFKCGDILEFNYDPQRHNVIIVDQEGHDSCKPASD 84
+ VGDD W + W GKTF+ GD LEF++ RH+V +V + ++C+
Sbjct: 25 YDVGDDTEWTRPMDPEFYTTWATGKTFRVGDELEFDFAAGRHDVAVVSEAAFENCEKEKP 84
Query: 85 AKKFQTGKDQIVLN-HGKNFFICGVPTHCSDHGMKLEINV 123
+I+LN G +FIC V HC G KL I V
Sbjct: 85 ISHMTVPPVKIMLNTTGPQYFICTVGDHCR-FGQKLSITV 123
>sp|P42849|UMEC_ARMRU Umecyanin OS=Armoracia rusticana PE=1 SV=1
Length = 115
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 44 NWPEGKTFKCGDILEFNYDPQRHNVIIVDQEGHDSCKPASDAKKFQTGKDQIVLN-HGKN 102
W GKTF+ GD LEF++ H+V +V ++ D+CK + T +I+LN G
Sbjct: 22 TWATGKTFRVGDELEFDFAAGMHDVAVVTKDAFDNCKKENPISHMTTPPVKIMLNTTGPQ 81
Query: 103 FFICGVPTHCSDHGMKLEINV 123
++IC V HC G KL INV
Sbjct: 82 YYICTVGDHCR-VGQKLSINV 101
>sp|P29602|CPC_CUCSA Cucumber peeling cupredoxin OS=Cucumis sativus PE=1 SV=3
Length = 137
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 9/105 (8%)
Query: 27 ATTFKVGDDGGWVFG-----VQNWPEGKTFKCGDILEFNYDPQRHNVIIVD-QEGHDSCK 80
+T VGD+ GW W GKTF+ GD L+FN+ HNV ++ ++ D+C
Sbjct: 2 STVHIVGDNTGWSVPSSPNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDACN 61
Query: 81 PASDAKKFQTGKDQI--VLNHGKNFFICGVPTHCSDHGMKLEINV 123
+ + I + G ++F+C V THCS+ G KL INV
Sbjct: 62 FVNSDNDVERTSPVIERLDELGMHYFVCTVGTHCSN-GQKLSINV 105
>sp|Q39131|LAML_ARATH Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1
Length = 172
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 3 QARGSAIIAVVTVLLLLMHCNIG-SATTFKVGDDGGWVFGVQN--WPEGKTFKCGDILEF 59
AR + +I V + L+ G +A + VG++ W + W +GK F GD L F
Sbjct: 1 MARFTVLITAVVLAFLMAAPMPGVTAKKYTVGENKFWNPNINYTIWAQGKHFYLGDWLYF 60
Query: 60 NYDPQRHNVIIVDQEGHDSCKPASDAKKFQ--TGKDQIVLNHGKNFFICGVPTHCSDHGM 117
+D +HN++ V++ ++ C + + G+D + LN K++++ C GM
Sbjct: 61 VFDRNQHNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYG-GM 119
Query: 118 KLEINVE 124
KL + VE
Sbjct: 120 KLSVKVE 126
>sp|Q9SK27|ENL1_ARATH Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060
PE=1 SV=2
Length = 182
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 9/119 (7%)
Query: 13 VTVLLLLMHCNIGSATTFKVGDDGG-W------VFGVQNWPEGKTFKCGDILEFNYDPQR 65
V + L+ ++ +A VG G W + W + FK GD + F Y+ +
Sbjct: 14 VAIFSLIFLFSLAAANEVTVGGKSGDWKIPPSSSYSFTEWAQKARFKVGDFIVFRYESGK 73
Query: 66 HNVIIVDQEGHDSCKPASDAKKFQTGKDQIVLNH-GKNFFICGVPTHCSDHGMKLEINV 123
+V+ V +E ++SC + + G+ ++ L+ G +FI G HC + G KL + V
Sbjct: 74 DSVLEVTKEAYNSCNTTNPLANYTDGETKVKLDRSGPFYFISGANGHC-EKGQKLSLVV 131
>sp|Q8LC95|ENL3_ARATH Early nodulin-like protein 3 OS=Arabidopsis thaliana GN=At5g25090
PE=1 SV=2
Length = 186
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 42 VQNWPEGKTFKCGDILEFNYDPQRHNVIIVDQEGHDSCKPASDAKKFQTGKDQIVLNH-G 100
+ W E F+ GD L + YD ++ +V+ V ++ + +C + A + G ++ L G
Sbjct: 45 LNKWAESLRFRVGDTLVWKYDEEKDSVLQVTKDAYINCNTTNPAANYSNGDTKVKLERSG 104
Query: 101 KNFFICGVPTHCSDHGMKLEINV 123
FFI G ++C + G KL I V
Sbjct: 105 PYFFISGSKSNCVE-GEKLHIVV 126
>sp|Q9T076|ENL2_ARATH Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520
PE=1 SV=1
Length = 349
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 7/116 (6%)
Query: 14 TVLLLLMHC-NIGSATTFKVGDDGGWVFG----VQNWPEGKTFKCGDILEFNYDPQRHNV 68
T+LL L I +A F VG G WV ++W F D L F+Y +V
Sbjct: 14 TILLSLSTLFTISNARKFNVGGSGAWVTNPPENYESWSGKNRFLVHDTLYFSYAKGADSV 73
Query: 69 IIVDQEGHDSCKPASDAKKFQTGKDQIVLN-HGKNFFICGVPTHCSDHGMKLEINV 123
+ V++ +D+C + K+ G +I L+ +G +FI G +C G KL + V
Sbjct: 74 LEVNKADYDACNTKNPIKRVDDGDSEISLDRYGPFYFISGNEDNC-KKGQKLNVVV 128
>sp|P93329|NO20_MEDTR Early nodulin-20 OS=Medicago truncatula GN=ENOD20 PE=3 SV=1
Length = 268
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 9/126 (7%)
Query: 6 GSAIIAVVTVLLLLMHCNIGSATTFKVGD-DGGWVF------GVQNWPEGKTFKCGDILE 58
S+ I ++ + + M + +T + VGD + W F + W F GD +
Sbjct: 3 SSSPILLMFIFSIWMLISYSESTDYLVGDSENSWKFPLPTRHALTRWASNYQFIVGDTIT 62
Query: 59 FNYDPQRHNVIIVDQEGHDSCKPASDAKKFQTGKDQIVLNH-GKNFFICGVPTHCSDHGM 117
F Y+ + +V V++E +D C + G +VL G + FI G HC G+
Sbjct: 63 FQYNNKTESVHEVEEEDYDRCGIRGEHVDHYDGNTMVVLKKTGIHHFISGKKRHCRL-GL 121
Query: 118 KLEINV 123
KL + V
Sbjct: 122 KLAVVV 127
>sp|P93328|NO16_MEDTR Early nodulin-16 OS=Medicago truncatula GN=ENOD16 PE=3 SV=1
Length = 180
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 56/132 (42%), Gaps = 12/132 (9%)
Query: 1 MAQARGSAIIAVVTVLLLLMHCNIGSATTFKVGDD-GGWVF------GVQNWPEGKTFKC 53
MA + ++ + ++ LL+ H +T + +GD W W F
Sbjct: 1 MASSSPILLMIIFSMWLLISHSE---STDYLIGDSHNSWKVPLPSRRAFARWASAHEFTV 57
Query: 54 GDILEFNYDPQRHNVIIVDQEGHDSCKPASDAKKFQTGKDQIVLNH-GKNFFICGVPTHC 112
GD + F YD + +V V++ + C + + G ++VL+ G FI G HC
Sbjct: 58 GDTILFEYDNETESVHEVNEHDYIMCHTNGEHVEHHDGNTKVVLDKIGVYHFISGTKRHC 117
Query: 113 SDHGMKLEINVE 124
G+KL + V+
Sbjct: 118 K-MGLKLAVVVQ 128
>sp|Q02917|NO552_SOYBN Early nodulin-55-2 OS=Glycine max GN=ENOD55-2 PE=2 SV=1
Length = 187
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 33 GDDGGWVF------GVQNWPEGKTFKCGDILEFNYDPQRHNVIIVDQEGHDSCKPASDAK 86
G + W F + +W FK GD L F Y+ + +V ++ ++ C
Sbjct: 33 GSEKSWKFPLSKPDSLSHWANSHRFKIGDTLIFKYEKRTESVHEGNETDYEGCNTVGKYH 92
Query: 87 -KFQTGKDQIVLNH-GKNFFICGVPTHCSDHGMKLEINV 123
F G +++L G FI G +HC G+KL + V
Sbjct: 93 IVFNGGNTKVMLTKPGFRHFISGNQSHC-QMGLKLAVLV 130
>sp|O64769|POT11_ARATH Potassium transporter 11 OS=Arabidopsis thaliana GN=POT11 PE=1 SV=1
Length = 792
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 9 IIAVVTVLLLLMHCNIGSATTFKVGDDGGWV 39
++ + TVL L++ C SA FK+ D GGWV
Sbjct: 481 LVLIFTVLSLVVECTYFSAMLFKI-DQGGWV 510
>sp|O36028|ATCZ_SCHPO Putative phospholipid-transporting ATPase C4F10.16c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC4F10.16c PE=3 SV=1
Length = 1367
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 47 EGKTFKCGDILEFNYDPQRHNVIIVDQEG--HDSCKPASDA--KKFQTGKDQIV 96
E K F+ DI+ F +R +VII D++G H CK A + +G++ I+
Sbjct: 753 ENKNFRVLDIIPFTSTRKRMSVIIRDEDGIIHLICKGADTVIFPRLSSGQNNII 806
>sp|Q3YSV8|SYA_EHRCJ Alanine--tRNA ligase OS=Ehrlichia canis (strain Jake) GN=alaS PE=3
SV=2
Length = 887
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 30/78 (38%), Gaps = 8/78 (10%)
Query: 45 WPEGKTFKCGDILEFNYDPQRHNVIIVDQEGHDSCKPASDAKKFQTGKDQIVLNHGKNF- 103
W G T CG E YD D EG P D +F + + + + +
Sbjct: 164 WSMGSTGPCGPCSEIFYDYGE------DIEGGLPGTPEEDGARFTEIWNLVFMQYNRKSD 217
Query: 104 -FICGVPTHCSDHGMKLE 120
+C +P C D GM LE
Sbjct: 218 GELCALPKKCIDTGMGLE 235
>sp|A8LL20|SYA_DINSH Alanine--tRNA ligase OS=Dinoroseobacter shibae (strain DFL 12)
GN=alaS PE=3 SV=1
Length = 887
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 21/82 (25%)
Query: 31 KVGDDGGWV-----------------FGVQNWPEGKTFKCGDILEFNYDPQRHNVIIVDQ 73
+VGD GG++ F + P+ + K GD+LE DP R I +
Sbjct: 504 QVGDSGGYLKSNGSGAIHDTQKRNGLFAHKVTPKAQPLKAGDVLEMRVDPARRTAIRANH 563
Query: 74 EG----HDSCKPASDAKKFQTG 91
H++ + A A Q G
Sbjct: 564 SATHLLHEALRQALGAHVAQRG 585
>sp|Q03792|RIM13_YEAST Calpain-like protease 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RIM13 PE=1 SV=1
Length = 727
Score = 29.6 bits (65), Expect = 5.5, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 44 NWPEGKTFKCGDILEFNYDPQRHN 67
NW + K FK +L F YD R+N
Sbjct: 314 NWNQEKLFKRSQVLHFRYDTSRYN 337
>sp|Q8NSC4|SAHH_CORGL Adenosylhomocysteinase OS=Corynebacterium glutamicum (strain ATCC
13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025)
GN=ahcY PE=3 SV=1
Length = 474
Score = 29.6 bits (65), Expect = 5.7, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 54 GDILEFNYDPQRHNVIIVDQEGHDSCKPASDAKKFQTGKDQIVLNHGK 101
G+I F+ + H+++ D + KP D F TG+ IVL+ G+
Sbjct: 338 GNIGHFDNEIDMHSLLHRDDVTRTTIKPQVDEFTFSTGRSIIVLSEGR 385
>sp|A4QC87|SAHH_CORGB Adenosylhomocysteinase OS=Corynebacterium glutamicum (strain R)
GN=ahcY PE=3 SV=1
Length = 478
Score = 29.6 bits (65), Expect = 5.7, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 54 GDILEFNYDPQRHNVIIVDQEGHDSCKPASDAKKFQTGKDQIVLNHGK 101
G+I F+ + H+++ D + KP D F TG+ IVL+ G+
Sbjct: 342 GNIGHFDNEIDMHSLLHRDDVTRTTIKPQVDEFTFSTGRSIIVLSEGR 389
>sp|Q5QY05|AMPA_IDILO Probable cytosol aminopeptidase OS=Idiomarina loihiensis (strain
ATCC BAA-735 / DSM 15497 / L2-TR) GN=pepA PE=3 SV=1
Length = 501
Score = 29.3 bits (64), Expect = 7.0, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 37 GWVFGVQNWPEGKTFKCGDILEFNYDPQRHNVIIVDQEG 75
G V G +N P+GK ++ GDIL Q V+ D EG
Sbjct: 316 GTVAGCENMPDGKAYRPGDILT-TMSGQTVEVLNTDAEG 353
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.139 0.446
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,364,578
Number of Sequences: 539616
Number of extensions: 1982107
Number of successful extensions: 3749
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 3719
Number of HSP's gapped (non-prelim): 27
length of query: 124
length of database: 191,569,459
effective HSP length: 91
effective length of query: 33
effective length of database: 142,464,403
effective search space: 4701325299
effective search space used: 4701325299
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)