Query 048131
Match_columns 124
No_of_seqs 107 out of 828
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 11:07:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048131.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048131hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2cbp_A Cucumber basic protein; 100.0 4.5E-41 1.5E-45 229.7 6.6 95 28-123 1-95 (96)
2 1ws8_A Mavicyanin; oxidized fo 100.0 5E-41 1.7E-45 234.3 4.0 98 26-124 1-103 (109)
3 1jer_A Cucumber stellacyanin; 100.0 1.2E-39 4E-44 235.7 3.6 98 26-124 2-107 (138)
4 1x9u_A Umecyanin; cupredoxin, 100.0 9.4E-39 3.2E-43 225.0 5.3 96 28-124 2-104 (116)
5 1f56_A Plantacyanin; cupredoxi 100.0 3.2E-37 1.1E-41 208.9 7.4 91 28-124 1-91 (91)
6 1qhq_A Protein (auracyanin); e 99.3 7E-12 2.4E-16 88.5 7.9 96 24-124 13-139 (140)
7 2cal_A Rusticyanin; iron respi 99.2 2.7E-11 9.2E-16 87.8 7.9 76 48-124 62-154 (154)
8 1bxv_A Plastocyanin; copper pr 99.2 7.3E-11 2.5E-15 76.7 6.9 84 29-124 4-91 (91)
9 1iuz_A Plastocyanin; electron 98.9 2.3E-09 7.9E-14 71.2 6.7 89 29-124 3-98 (98)
10 2aan_A Auracyanin A; cupredoxi 98.9 1.9E-08 6.4E-13 70.7 10.3 94 25-124 16-139 (139)
11 1kdj_A Plastocyanin; electron 98.8 1.2E-08 4E-13 67.8 7.9 88 30-124 3-102 (102)
12 1pmy_A Pseudoazurin; electron 98.8 1E-08 3.4E-13 71.8 7.7 80 33-124 11-93 (123)
13 2plt_A Plastocyanin; electron 98.8 5.5E-09 1.9E-13 68.8 5.8 89 29-124 3-98 (98)
14 2gim_A Plastocyanin; beta shee 98.8 3.2E-08 1.1E-12 65.9 9.4 89 29-124 5-105 (106)
15 1paz_A Pseudoazurin precursor; 98.8 1.3E-08 4.4E-13 71.2 7.7 80 33-124 11-93 (123)
16 1plc_A Plastocyanin; electron 98.8 2.4E-08 8.3E-13 66.0 8.3 88 30-124 3-99 (99)
17 1b3i_A PETE protein, protein ( 98.8 3.7E-08 1.3E-12 64.7 7.8 87 29-124 4-97 (97)
18 3ef4_A Pseudoazurin, blue copp 98.7 2.6E-08 8.8E-13 70.1 7.1 81 32-124 10-94 (124)
19 3erx_A Pseudoazurin; copper pr 98.7 1.7E-08 5.9E-13 70.7 5.8 76 37-124 15-93 (123)
20 3tu6_A Pseudoazurin (blue copp 98.7 4.5E-08 1.5E-12 69.0 7.2 81 32-124 11-95 (127)
21 1byp_A Protein (plastocyanin); 98.7 8.1E-08 2.8E-12 63.3 7.9 88 30-124 3-99 (99)
22 1pcs_A Plastocyanin; electron 98.6 4.2E-08 1.4E-12 64.6 4.5 89 29-124 4-98 (98)
23 4hci_A Cupredoxin 1; structura 98.1 9.7E-07 3.3E-11 58.6 2.3 65 48-124 29-100 (100)
24 3c75_A Amicyanin; copper prote 98.1 4.6E-06 1.6E-10 58.4 5.5 76 37-124 54-132 (132)
25 3cvb_A Plastocyanin; cupredoxi 98.0 2.4E-05 8E-10 51.5 7.6 87 29-124 4-104 (105)
26 2ux6_A Pseudoazurin; type-1 co 97.9 3.2E-05 1.1E-09 53.6 6.8 78 33-124 11-91 (122)
27 1cuo_A Protein (azurin ISO-2); 97.8 5.4E-05 1.8E-09 53.1 7.3 90 29-124 4-128 (129)
28 3ay2_A Lipid modified azurin p 97.8 8.4E-05 2.9E-09 54.5 8.5 92 27-124 42-166 (167)
29 1id2_A Amicyanin; beta barrel, 97.7 8E-05 2.7E-09 49.9 6.5 69 48-124 35-106 (106)
30 2ov0_A Amicyanin; beta-sandwic 97.7 7.1E-05 2.4E-09 49.9 6.0 81 27-124 18-105 (105)
31 1iko_P Ephrin-B2; greek KEY, g 97.7 2E-05 6.9E-10 58.6 3.2 74 51-124 26-139 (178)
32 2ccw_A Azurin II, AZN-2; elect 97.6 0.00034 1.2E-08 49.0 8.3 90 29-124 4-128 (129)
33 2iaa_C Azurin; quinoprotein, t 97.5 0.00068 2.3E-08 47.4 9.0 89 30-124 4-127 (128)
34 1nwp_A Azurin; electron transp 97.4 0.00083 2.8E-08 47.0 8.6 90 29-124 4-128 (128)
35 3d12_B Ephrin-B3; beta propell 97.1 0.00096 3.3E-08 47.8 6.0 75 50-124 23-140 (141)
36 1iby_A Nitrosocyanin; RED copp 96.8 0.00067 2.3E-08 45.3 2.7 66 48-124 39-111 (112)
37 2x11_B Ephrin-A5; receptor-sig 96.6 0.00098 3.3E-08 49.4 2.8 75 49-124 52-161 (177)
38 2wo3_B Ephrin-A2; transferase- 96.3 0.0048 1.7E-07 44.9 4.6 35 49-83 32-77 (157)
39 1shx_A Ephrin-A5; ephrin signa 96.2 0.0053 1.8E-07 43.8 4.3 75 49-124 23-132 (138)
40 2cua_A Protein (CUA); CUA cent 96.1 0.025 8.5E-07 39.6 7.3 66 48-124 61-134 (135)
41 2vsm_B Ephrin-B2; developmenta 96.1 0.0054 1.8E-07 43.8 3.9 74 51-124 25-138 (140)
42 3czu_B Ephrin-A1; ATP-binding, 95.9 0.0061 2.1E-07 45.3 3.7 61 19-83 21-95 (182)
43 3s8f_B Cytochrome C oxidase su 95.2 0.067 2.3E-06 39.0 7.0 68 47-124 93-167 (168)
44 3fsa_A Azurin; copper, cupredo 94.5 0.4 1.4E-05 33.4 9.1 84 32-124 7-125 (125)
45 2dv6_A Nitrite reductase; elec 94.4 0.035 1.2E-06 44.9 4.0 74 46-124 54-131 (447)
46 3sbq_A Nitrous-oxide reductase 93.8 0.11 3.7E-06 45.1 6.1 66 48-124 559-636 (638)
47 3l6w_A Hemocyanin 1; cupredoxi 91.5 0.13 4.4E-06 43.4 3.5 75 49-124 413-491 (491)
48 1fwx_A Nitrous oxide reductase 91.4 0.39 1.3E-05 41.3 6.4 66 48-124 514-591 (595)
49 3hei_B Ephrin-A1; EPH receptor 91.3 0.19 6.3E-06 35.5 3.6 35 49-83 22-67 (132)
50 1mzy_A Copper-containing nitri 83.5 1.1 3.7E-05 34.8 4.0 73 48-124 65-151 (333)
51 1oe1_A Dissimilatory copper-co 83.3 1.3 4.5E-05 34.3 4.4 73 48-124 66-151 (336)
52 1kbv_A ANIA, major outer membr 80.7 1.3 4.6E-05 34.4 3.6 74 47-124 70-155 (327)
53 2zoo_A Probable nitrite reduct 76.2 1.2 4.2E-05 35.7 2.2 83 38-124 51-145 (442)
54 3gdc_A Multicopper oxidase; be 68.8 4 0.00014 31.1 3.4 85 38-124 57-153 (288)
55 2bw4_A Copper-containing nitri 67.9 6 0.0002 30.6 4.3 73 48-124 72-157 (340)
56 3iuw_A Activating signal coint 56.0 5.3 0.00018 25.8 1.7 16 49-64 36-52 (83)
57 2k75_A Uncharacterized protein 52.1 6.2 0.00021 25.9 1.6 29 29-60 41-69 (106)
58 1yel_A AT1G16640; CESG, protei 51.7 4.6 0.00016 26.2 0.9 19 46-64 73-91 (104)
59 4i1k_A B3 domain-containing tr 46.2 15 0.00053 25.5 3.0 26 46-71 112-137 (146)
60 2l8d_A Lamin-B receptor; DNA b 45.8 19 0.00065 22.2 3.0 45 48-97 7-53 (66)
61 2zwn_A Two-domain type laccase 44.9 13 0.00046 28.8 2.7 86 38-124 26-125 (339)
62 1fft_B Ubiquinol oxidase; elec 44.1 50 0.0017 25.9 6.0 84 28-123 128-224 (315)
63 2z0t_A Putative uncharacterize 42.5 7 0.00024 26.3 0.6 11 49-59 32-42 (109)
64 1mzy_A Copper-containing nitri 42.0 11 0.00036 29.1 1.7 30 94-124 286-317 (333)
65 1xne_A Hypothetical protein PF 41.8 6.9 0.00024 26.5 0.5 12 49-60 33-44 (113)
66 2q9o_A Laccase-1; multicopper 40.5 22 0.00075 29.6 3.5 74 48-124 68-156 (559)
67 3gdc_A Multicopper oxidase; be 40.3 8.6 0.0003 29.1 0.9 30 94-124 257-287 (288)
68 4he6_A Peptidase family U32; u 40.1 25 0.00087 21.9 3.1 24 48-71 27-50 (89)
69 1cyx_A CYOA; electron transpor 40.1 22 0.00075 26.4 3.1 84 28-123 18-114 (205)
70 1sdd_A Coagulation factor V; c 39.4 4 0.00014 31.3 -1.1 75 48-124 216-299 (306)
71 1oe1_A Dissimilatory copper-co 38.9 12 0.00043 28.7 1.7 30 94-124 286-317 (336)
72 1aoz_A Ascorbate oxidase; oxid 36.6 36 0.0012 28.1 4.2 74 48-124 35-122 (552)
73 2l55_A SILB,silver efflux prot 36.4 23 0.0008 22.3 2.4 21 43-63 40-60 (82)
74 2kbn_A Conserved protein; nucl 35.8 25 0.00084 23.0 2.6 33 27-60 36-70 (109)
75 2xu9_A Laccase; oxidoreductase 34.8 55 0.0019 26.1 5.0 70 48-124 48-134 (439)
76 3hb3_B Cytochrome C oxidase su 33.2 29 0.00099 27.1 2.9 28 94-123 232-262 (298)
77 2qcp_X Cation efflux system pr 32.8 20 0.00068 22.4 1.6 17 47-63 50-66 (80)
78 2hzs_I RNA polymerase II media 32.6 0.38 1.3E-05 24.4 -5.2 19 48-66 4-22 (27)
79 2dig_A Lamin-B receptor; tudor 32.6 42 0.0015 20.7 3.0 45 48-97 10-56 (68)
80 2gsm_B Cytochrome C oxidase su 31.9 32 0.0011 26.2 3.0 27 94-123 214-244 (262)
81 3t6v_A Laccase; beta barrel, o 31.4 45 0.0015 27.4 3.9 30 94-124 97-128 (495)
82 2vb2_X Copper protein, cation 31.2 22 0.00074 22.7 1.6 21 43-63 54-74 (88)
83 1v10_A Laccase; multicopper bl 30.9 48 0.0016 27.3 4.0 30 94-124 117-148 (521)
84 4dok_A Similarity to chalcone- 30.4 40 0.0014 24.8 3.1 21 48-68 135-155 (208)
85 1zpu_A Iron transport multicop 30.3 54 0.0018 27.1 4.3 74 48-124 35-123 (534)
86 1wjj_A Hypothetical protein F2 30.2 19 0.00063 25.3 1.2 33 29-62 65-98 (145)
87 4doi_A Chalcone--flavonone iso 30.1 47 0.0016 25.2 3.6 17 48-64 152-168 (246)
88 3pxl_A Laccase; 4-copper prote 29.9 49 0.0017 27.2 4.0 30 94-124 96-127 (499)
89 1v54_B Cytochrome C oxidase po 29.1 31 0.0011 25.7 2.4 27 94-123 183-213 (227)
90 1z0n_A 5'-AMP-activated protei 29.0 80 0.0027 19.9 4.1 21 57-77 13-34 (96)
91 3sqr_A Laccase; multicopper ox 28.0 62 0.0021 27.3 4.3 30 94-124 156-186 (580)
92 4doo_A Chalcone-flavanone isom 27.3 43 0.0015 24.2 2.9 23 43-65 132-154 (205)
93 1hfu_A Laccase 1; oxidoreducta 25.6 36 0.0012 27.8 2.4 30 94-124 96-127 (503)
94 1wid_A DNA-binding protein RAV 24.9 45 0.0015 22.4 2.4 17 47-63 88-104 (130)
95 2uxt_A Protein SUFI, SUFI; oxi 24.7 32 0.0011 27.8 1.9 70 48-124 51-137 (451)
96 1kbv_A ANIA, major outer membr 24.2 38 0.0013 26.0 2.2 29 94-123 275-305 (327)
97 3e0e_A Replication protein A; 23.6 21 0.00073 22.7 0.5 31 28-59 40-72 (97)
98 1ed7_A Chitinase A1, (CHBD-CHI 22.0 30 0.001 19.2 0.9 16 44-59 1-16 (45)
99 2hd9_A UPF0310 protein PH1033; 21.5 48 0.0017 22.8 2.1 29 49-77 33-72 (145)
100 2p5d_A UPF0310 protein mjecl36 21.4 45 0.0015 23.0 1.9 29 49-77 36-73 (147)
101 4dol_A AT1G53520, 94270-95700, 20.5 61 0.0021 23.5 2.5 24 49-72 146-169 (217)
102 2qlv_B Protein SIP2, protein S 20.0 1.1E+02 0.0038 23.0 4.0 15 57-71 6-20 (252)
No 1
>2cbp_A Cucumber basic protein; electron transport, phytocyanin, type 1 copper protein; 1.80A {Cucumis sativus} SCOP: b.6.1.1
Probab=100.00 E-value=4.5e-41 Score=229.71 Aligned_cols=95 Identities=46% Similarity=1.072 Sum_probs=92.0
Q ss_pred EEEEecCCCCCCccccCCCCCCeeeeCCEEEEEeCCCCCeEEEECcCCCCCCCCCCCCcccccCCcEEEeCCcceEEEeC
Q 048131 28 TTFKVGDDGGWVFGVQNWPEGKTFKCGDILEFNYDPQRHNVIIVDQEGHDSCKPASDAKKFQTGKDQIVLNHGKNFFICG 107 (124)
Q Consensus 28 ~~~~VG~~~gW~~~~~~Wa~~~~f~vGD~L~F~y~~~~h~V~~V~~~~y~~C~~~~~~~~~~~G~~~v~l~~G~~yfic~ 107 (124)
++|+|||+.||+++|++||++++|++||+|+|+|+++.|+|+||++++|++|++++|+..+++|+++|+|.+|++||||+
T Consensus 1 ~~~~VG~~~GW~~~y~~Wa~~~~f~vGD~L~F~y~~~~hsV~~v~~~~y~~C~~~~~~~~~~~G~~~v~L~~g~~yFic~ 80 (96)
T 2cbp_A 1 AVYVVGGSGGWTFNTESWPKGKRFRAGDILLFNYNPSMHNVVVVNQGGFSTCNTPAGAKVYTSGRDQIKLPKGQSYFICN 80 (96)
T ss_dssp CEEETTGGGCSCSSCTTTTTTCCBCTTCEEEEECCTTTCCEEEECHHHHHHTCCCTTCEEECSSEEEEECCSEEEEEECC
T ss_pred CEEEECCcCCCccChhhhccCceEcCCCEEEEEecCCCCEEEEECHHHCCccCCCCCcccccCCCeEEEecCCCEEEEcC
Confidence 37999999999999999999999999999999999999999999999999999999999999999999998899999999
Q ss_pred CCCCccCCCcEEEEEe
Q 048131 108 VPTHCSDHGMKLEINV 123 (124)
Q Consensus 108 ~~~hC~~~GmKl~I~V 123 (124)
+++||+ +||||+|+|
T Consensus 81 ~~~HC~-~Gmkl~I~V 95 (96)
T 2cbp_A 81 FPGHCQ-SGMKIAVNA 95 (96)
T ss_dssp STTTGG-GTCEEEEEE
T ss_pred CCCccc-cCCEEEEEE
Confidence 999999 999999998
No 2
>1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A
Probab=100.00 E-value=5e-41 Score=234.28 Aligned_cols=98 Identities=44% Similarity=0.833 Sum_probs=93.4
Q ss_pred eeEEEEecCCCCCCcc----ccCCCCCCeeeeCCEEEEEeCCCCCeEEEECcCCCCCCCCCCCCcccccCCcEEEeC-Cc
Q 048131 26 SATTFKVGDDGGWVFG----VQNWPEGKTFKCGDILEFNYDPQRHNVIIVDQEGHDSCKPASDAKKFQTGKDQIVLN-HG 100 (124)
Q Consensus 26 ~a~~~~VG~~~gW~~~----~~~Wa~~~~f~vGD~L~F~y~~~~h~V~~V~~~~y~~C~~~~~~~~~~~G~~~v~l~-~G 100 (124)
+|++|+|||+.||+++ |++||++++|++||+|+|+|+++.|+|+||++++|++|+.++|+..+++|+++|+|+ +|
T Consensus 1 ~a~~~~VG~~~GW~~~~~~~Y~~Wa~~~~F~vGD~LvF~y~~~~hsV~~V~~~~y~~C~~~~p~~~~~~G~~~v~L~~~G 80 (109)
T 1ws8_A 1 MATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRPG 80 (109)
T ss_dssp CCCEEETTGGGCSCSSSCCCHHHHHHTSCBCTTCEEEEECCTTTCCEEEECHHHHHHTCCSSCSEEECSSEEEEECCSSE
T ss_pred CCcEEEeCCCCCccCCCCcChhHhhcCCcCcCCCEEEEeecCCCceEEEEChHHCCcccCCCcccccCCCCEEEEECCCc
Confidence 3688999999999975 689999999999999999999999999999999999999999999999999999998 99
Q ss_pred ceEEEeCCCCCccCCCcEEEEEeC
Q 048131 101 KNFFICGVPTHCSDHGMKLEINVE 124 (124)
Q Consensus 101 ~~yfic~~~~hC~~~GmKl~I~V~ 124 (124)
++||||++++||+ +||||+|+|.
T Consensus 81 ~~yFic~~~gHC~-~GmKl~I~V~ 103 (109)
T 1ws8_A 81 TFYFLCGIPGHCQ-LGQKVEIKVD 103 (109)
T ss_dssp EEEEECCSTTTTT-TTCEEEEEEC
T ss_pred CEEEECCCCCccc-CCCEEEEEEc
Confidence 9999999999999 9999999984
No 3
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=100.00 E-value=1.2e-39 Score=235.74 Aligned_cols=98 Identities=37% Similarity=0.718 Sum_probs=93.9
Q ss_pred eeEEEEecCCCCCCcc-----ccCCCCCCeeeeCCEEEEEeCCCCCeEEEE-CcCCCCCCCCCCCCcccccCCcEEEe-C
Q 048131 26 SATTFKVGDDGGWVFG-----VQNWPEGKTFKCGDILEFNYDPQRHNVIIV-DQEGHDSCKPASDAKKFQTGKDQIVL-N 98 (124)
Q Consensus 26 ~a~~~~VG~~~gW~~~-----~~~Wa~~~~f~vGD~L~F~y~~~~h~V~~V-~~~~y~~C~~~~~~~~~~~G~~~v~l-~ 98 (124)
+|++|+|||+.||+++ |++||++|+|++||+|+|+|+++.|+|+|| ++++|+.|+.++++..+++|+++|+| +
T Consensus 2 ~a~~~~VGg~~GW~~~~~~~~Y~~Wa~~~~F~vGD~LvF~y~~~~HsV~~V~~~~~y~~C~~s~p~~~~~~G~~~v~L~~ 81 (138)
T 1jer_A 2 QSTVHIVGDNTGWSVPSSPNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDACNFVNSDNDVERTSPVIERLD 81 (138)
T ss_dssp CCCEEETTGGGCSSCCSSTTHHHHHHHTCCEETTCEEEECCCTTTCCCEEESCHHHHHHTCCTTSCCCCCCCSCEEEECC
T ss_pred CceEEEECCcCcCcCCCCccchhhhhcCCcCcCCCEEEEeecCCCceEEEeCchhhcCccCCCCccccccCCCeEEEecc
Confidence 5789999999999987 789999999999999999999999999999 99999999999999999999999999 8
Q ss_pred -CcceEEEeCCCCCccCCCcEEEEEeC
Q 048131 99 -HGKNFFICGVPTHCSDHGMKLEINVE 124 (124)
Q Consensus 99 -~G~~yfic~~~~hC~~~GmKl~I~V~ 124 (124)
+|++||||++++||+ +||||+|+|.
T Consensus 82 ~~G~~YFicg~~gHC~-~GmKl~I~V~ 107 (138)
T 1jer_A 82 ELGMHYFVCTVGTHCS-NGQKLSINVV 107 (138)
T ss_dssp SSEEEEEECCSTTTGG-GTCEEEEEEE
T ss_pred CCcCEEEEcCCCCccc-cCCEEEEEEc
Confidence 899999999999999 9999999983
No 4
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=100.00 E-value=9.4e-39 Score=224.98 Aligned_cols=96 Identities=36% Similarity=0.717 Sum_probs=91.2
Q ss_pred EEEEecCCCCCCcc-----ccCCCCCCeeeeCCEEEEEeCCCCCeEEEECcCCCCCCCCCCCCcccccCCcEEEeC-Ccc
Q 048131 28 TTFKVGDDGGWVFG-----VQNWPEGKTFKCGDILEFNYDPQRHNVIIVDQEGHDSCKPASDAKKFQTGKDQIVLN-HGK 101 (124)
Q Consensus 28 ~~~~VG~~~gW~~~-----~~~Wa~~~~f~vGD~L~F~y~~~~h~V~~V~~~~y~~C~~~~~~~~~~~G~~~v~l~-~G~ 101 (124)
++|+|||+.||+++ |++||++++|++||+|+|+|.++.|+|+||++++|++|+.++|+..+++|+++|+|+ +|+
T Consensus 2 ~~~~VG~~~GW~~~~~~~~Y~~Wa~~~~f~vGD~L~F~y~~~~HsV~~V~~~~y~~C~~~~~~~~~~~G~~~v~l~~~G~ 81 (116)
T 1x9u_A 2 EDYDVGGDMEWKRPSDPKFYITWATGKTFRVGDELEFDFAAGMHDVAVVTKDAFDNCKKENPISHMTTPPVKIMLNTTGP 81 (116)
T ss_dssp CEEETTGGGCSSCCSSTTHHHHHHTTCCEETTCEEEECCCTTTCCEEEECHHHHHTTCCSSCSEEECSSSEEEECCSCEE
T ss_pred eEEEECCcCcCcCCCCCcchhhccccccCcCCCEEEEEecCCCCeEEEEChhhcCccCCCCCccccCCCCeEEEECCCCC
Confidence 47999999999863 789999999999999999999999999999999999999999999999999999999 999
Q ss_pred eEEEeCCCCCccCCCcEEEE-EeC
Q 048131 102 NFFICGVPTHCSDHGMKLEI-NVE 124 (124)
Q Consensus 102 ~yfic~~~~hC~~~GmKl~I-~V~ 124 (124)
+||||++++||+ +||||+| +|+
T Consensus 82 ~yFic~~~~HC~-~Gmkl~In~V~ 104 (116)
T 1x9u_A 82 QYYICTVGDHCR-VGQKLSINVVG 104 (116)
T ss_dssp EEEECCSTTTTT-TTCEEEEEEEC
T ss_pred EEEECCCCCccc-cCCEEEEEEEC
Confidence 999999999999 9999999 774
No 5
>1f56_A Plantacyanin; cupredoxin, copper protein, beta barrel, plant protein; 2.05A {Spinacia oleracea} SCOP: b.6.1.1
Probab=100.00 E-value=3.2e-37 Score=208.87 Aligned_cols=91 Identities=41% Similarity=0.905 Sum_probs=87.1
Q ss_pred EEEEecCCCCCCccccCCCCCCeeeeCCEEEEEeCCCCCeEEEECcCCCCCCCCCCCCcccccCCcEEEeCCcceEEEeC
Q 048131 28 TTFKVGDDGGWVFGVQNWPEGKTFKCGDILEFNYDPQRHNVIIVDQEGHDSCKPASDAKKFQTGKDQIVLNHGKNFFICG 107 (124)
Q Consensus 28 ~~~~VG~~~gW~~~~~~Wa~~~~f~vGD~L~F~y~~~~h~V~~V~~~~y~~C~~~~~~~~~~~G~~~v~l~~G~~yfic~ 107 (124)
++|+| ||+++ ++||++++|++||+|+|+|+++.|+|+||++++|++|+.++|+..+++|+++|+|++|++||||+
T Consensus 1 ~~y~V----gW~~~-~~Wa~~~~f~vGD~L~F~y~~~~hsV~~v~~~~y~~C~~~~~~~~~~~G~~~v~L~~g~~yFic~ 75 (91)
T 1f56_A 1 AVYNI----GWSFN-VNGARGKSFRAGDVLVFKYIKGQHNVVAVNGRGYASCSAPRGARTYSSGQDRIKLTRGQNYFICS 75 (91)
T ss_dssp CEEEE----ECSSS-CBSCTTCCBCTTCEEEEECCBTTBCEEEECHHHHHTTCCCTTCEEECSSEEEEECCSEEEEEECC
T ss_pred CEEEE----eCCCC-CcCcCCccEeCCCEEEEEccCCCCeEEEECHHHcCCcCCCCCcccccCCCcEEEeCCCCeEEEcC
Confidence 36888 89998 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccCCCcEEEEEeC
Q 048131 108 VPTHCSDHGMKLEINVE 124 (124)
Q Consensus 108 ~~~hC~~~GmKl~I~V~ 124 (124)
+++||+ +||||+|+|.
T Consensus 76 ~~~HC~-~Gmkl~I~v~ 91 (91)
T 1f56_A 76 FPGHCG-GGMKIAINAK 91 (91)
T ss_dssp STTTTT-TTCEEEEEEC
T ss_pred CCCccc-cCCEEEEEEC
Confidence 999999 9999999984
No 6
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=99.30 E-value=7e-12 Score=88.46 Aligned_cols=96 Identities=18% Similarity=0.304 Sum_probs=65.3
Q ss_pred cceeEEEEecCC-CCCCccccCCCCCCeeeeCCEEEEEeCC-----CCCeEEEECcC-CCCC--------------C---
Q 048131 24 IGSATTFKVGDD-GGWVFGVQNWPEGKTFKCGDILEFNYDP-----QRHNVIIVDQE-GHDS--------------C--- 79 (124)
Q Consensus 24 ~a~a~~~~VG~~-~gW~~~~~~Wa~~~~f~vGD~L~F~y~~-----~~h~V~~V~~~-~y~~--------------C--- 79 (124)
.+...++.|+-. .+|.+.++ ..+++.||++.|.+.+ ..|++...+.. ++.. .
T Consensus 13 ~~~~~~v~V~~~~~~~~F~P~----~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (140)
T 1qhq_A 13 ETPAQTVEVRAAPDALAFAQT----SLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPP 88 (140)
T ss_dssp SCCSEEEEEEBCSSSSSBSCS----EEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCT
T ss_pred cCCCEEEEEEEeCCCceEeCC----eEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCcc
Confidence 344567777753 45887753 5799999999988865 47999887422 1110 0
Q ss_pred CCC------CCCcccccCCcEEEeC-CcceEEEeCCCCCccCCCcEEEEEeC
Q 048131 80 KPA------SDAKKFQTGKDQIVLN-HGKNFFICGVPTHCSDHGMKLEINVE 124 (124)
Q Consensus 80 ~~~------~~~~~~~~G~~~v~l~-~G~~yfic~~~~hC~~~GmKl~I~V~ 124 (124)
+.. ..+....++..+|+++ ||.|||+|++++||. .|||..|+|+
T Consensus 89 ~~~~~~~~t~~l~pG~~~~~~~~~~~~G~y~f~C~~~~H~~-~GM~g~i~V~ 139 (140)
T 1qhq_A 89 DTPNALAWTAMLNAGESGSVTFRTPAPGTYLYICTFPGHYL-AGMKGTLTVT 139 (140)
T ss_dssp TCTTEEEECCCBCTTEEEEEEEECCSSEEEEEECCSTTTTT-TTCEEEEEEE
T ss_pred ccccccccceeeCCCceeEEEEEeCCCeeEEEEeCCcCHhh-cCCEEEEEEc
Confidence 000 1112223344567777 999999999999999 9999999984
No 7
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.23 E-value=2.7e-11 Score=87.80 Aligned_cols=76 Identities=14% Similarity=0.234 Sum_probs=57.7
Q ss_pred CCeeeeCCEEEEEeCCC----CCeEEEEC-cCCCCCCCCCCCCc-------ccccC---CcEEEe--CCcceEEEeCCCC
Q 048131 48 GKTFKCGDILEFNYDPQ----RHNVIIVD-QEGHDSCKPASDAK-------KFQTG---KDQIVL--NHGKNFFICGVPT 110 (124)
Q Consensus 48 ~~~f~vGD~L~F~y~~~----~h~V~~V~-~~~y~~C~~~~~~~-------~~~~G---~~~v~l--~~G~~yfic~~~~ 110 (124)
..++++||+|+|++.+. .|++..++ ...|+.|....++. ....| ..++++ .||+|||+|+.++
T Consensus 62 ~i~V~~GD~V~~~~tN~~~~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~t~tft~~pGtY~y~C~~~g 141 (154)
T 2cal_A 62 TLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTDFTWHPTAGTYYYVCQIPG 141 (154)
T ss_dssp EEEECTTCEEEEEEEECCTTCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEEEEEECCCSEEEEEECCSTT
T ss_pred EEEEeCCCEEEEEEEcCCCCeeeEEEEeecCcchhccccccccccccccccccCCCCceEEEEEEEECCceEEEECCCCC
Confidence 46889999999999742 69999994 56787786554321 12233 345544 4899999999999
Q ss_pred CccCCCcEEEEEeC
Q 048131 111 HCSDHGMKLEINVE 124 (124)
Q Consensus 111 hC~~~GmKl~I~V~ 124 (124)
||+ .||+..|.|+
T Consensus 142 H~~-~GM~G~IiV~ 154 (154)
T 2cal_A 142 MAA-TGMFGKIVVK 154 (154)
T ss_dssp TGG-GTCEEEEEEC
T ss_pred HHH-CCCEEEEEEC
Confidence 999 9999999986
No 8
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=99.17 E-value=7.3e-11 Score=76.73 Aligned_cols=84 Identities=24% Similarity=0.401 Sum_probs=60.0
Q ss_pred EEEecCC-CCCCccccCCCCCCeeeeCCEEEEEeCC-CCCeEEEECcCCCCCCCCCCCCcccccC-CcEEEeC-CcceEE
Q 048131 29 TFKVGDD-GGWVFGVQNWPEGKTFKCGDILEFNYDP-QRHNVIIVDQEGHDSCKPASDAKKFQTG-KDQIVLN-HGKNFF 104 (124)
Q Consensus 29 ~~~VG~~-~gW~~~~~~Wa~~~~f~vGD~L~F~y~~-~~h~V~~V~~~~y~~C~~~~~~~~~~~G-~~~v~l~-~G~~yf 104 (124)
+..+|++ .+|.+.++ ..++++||+|.|.+.. ..|+|...+...+. ........| ..+++++ ||+|+|
T Consensus 4 ~v~~~~~~~~~~f~P~----~i~v~~Gd~V~~~n~~~~~H~v~~~~~~~~~-----~~~~~~~~g~~~~~~f~~~G~y~~ 74 (91)
T 1bxv_A 4 AIKMGADNGMLAFEPS----TIEIQAGDTVQWVNNKLAPHNVVVEGQPELS-----HKDLAFSPGETFEATFSEPGTYTY 74 (91)
T ss_dssp EEEESCTTSCSSEESS----EEEECTTCEEEEEECSSCCEEEEETTCGGGC-----EEEEECSTTCEEEEECCSCEEEEE
T ss_pred EEEEecCCCccEEeCC----EEEECCCCEEEEEECCCCCcEEEEeCCCccC-----cccceeCCCCEEEEEeCCCEEEEE
Confidence 4456653 56776654 4789999999999874 57999876432221 011123334 3477888 999999
Q ss_pred EeCCCCCccCCCcEEEEEeC
Q 048131 105 ICGVPTHCSDHGMKLEINVE 124 (124)
Q Consensus 105 ic~~~~hC~~~GmKl~I~V~ 124 (124)
+|. .||. .||+..|.|+
T Consensus 75 ~C~--~H~~-~gM~g~i~V~ 91 (91)
T 1bxv_A 75 YCE--PHRG-AGMVGKIVVQ 91 (91)
T ss_dssp ECT--TTGG-GTCEEEEEEC
T ss_pred EeC--CCcc-CCCEEEEEEC
Confidence 999 7999 9999999996
No 9
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.93 E-value=2.3e-09 Score=71.16 Aligned_cols=89 Identities=26% Similarity=0.390 Sum_probs=59.3
Q ss_pred EEEecC-CCCCCccccCCCCCCeeeeCCEEEEEeCC-CCCeEEEECc---CCCCCCCCCCCCcccccCCc-EEEeC-Ccc
Q 048131 29 TFKVGD-DGGWVFGVQNWPEGKTFKCGDILEFNYDP-QRHNVIIVDQ---EGHDSCKPASDAKKFQTGKD-QIVLN-HGK 101 (124)
Q Consensus 29 ~~~VG~-~~gW~~~~~~Wa~~~~f~vGD~L~F~y~~-~~h~V~~V~~---~~y~~C~~~~~~~~~~~G~~-~v~l~-~G~ 101 (124)
+..+|+ +.++.+.|+ ..++++||+|.|.+.. ..|+|...+. ++++.+..+........|.+ +++++ ||.
T Consensus 3 ~V~m~~~~~~~~F~P~----~i~v~~GdtV~~~n~~~~~H~v~~~~~~~p~g~~~~~~~~~~~~~~~g~~~~~tf~~~G~ 78 (98)
T 1iuz_A 3 IVKLGGDDGSLAFVPS----KISVAAGEAIEFVNNAGFPHNIVFDEDAVPAGVDADAISYDDYLNSKGETVVRKLSTPGV 78 (98)
T ss_dssp EEEESCTTSCCSEESS----EEEECTTCEEEEEECSSCCEEEEECTTSSCTTCCHHHHCEEEEECSTTCEEEEECCSCEE
T ss_pred EEEEecCCCCcEEeCC----EEEECCCCEEEEEECCCCCEEEEEeCCCCccccccccccccccccCCCCEEEEEcCCCEE
Confidence 344454 456776654 4789999999999876 3899987531 12222111100012334443 67888 999
Q ss_pred eEEEeCCCCCccCCCcEEEEEeC
Q 048131 102 NFFICGVPTHCSDHGMKLEINVE 124 (124)
Q Consensus 102 ~yfic~~~~hC~~~GmKl~I~V~ 124 (124)
|+|+|.. ||. .||+..|.|+
T Consensus 79 y~y~C~~--H~~-~gM~G~I~V~ 98 (98)
T 1iuz_A 79 YGVYCEP--HAG-AGMKMTITVQ 98 (98)
T ss_dssp EEEECTT--TGG-GTCEEEEEEC
T ss_pred EEEEchh--hcc-CCCEEEEEEC
Confidence 9999995 999 9999999986
No 10
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.88 E-value=1.9e-08 Score=70.69 Aligned_cols=94 Identities=18% Similarity=0.303 Sum_probs=63.5
Q ss_pred ceeEEEEecC-CCCCCccccCCCCCCeeeeCCEEEEEeCCC----CCeEEEECcC------------------CCCCCCC
Q 048131 25 GSATTFKVGD-DGGWVFGVQNWPEGKTFKCGDILEFNYDPQ----RHNVIIVDQE------------------GHDSCKP 81 (124)
Q Consensus 25 a~a~~~~VG~-~~gW~~~~~~Wa~~~~f~vGD~L~F~y~~~----~h~V~~V~~~------------------~y~~C~~ 81 (124)
++..+..||. ..++.+.++ ..++++||++.|.+.+. .|++...+.. +|..+..
T Consensus 16 ~~~~~V~v~~~~~~~~F~p~----~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~ 91 (139)
T 2aan_A 16 SGPVTIEIGSKGEELAFDKT----ELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADK 91 (139)
T ss_dssp -CCEEEEEEBCTTSSSBSCS----EEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCC
T ss_pred CcCEEEEEEecCCccEEcCC----eEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCccc
Confidence 4445666742 246666553 47899999999888643 6999888532 5665653
Q ss_pred CCCC---cccccCCc---EEEeC-CcceEEEeCCCCCccCCCcEEEEEeC
Q 048131 82 ASDA---KKFQTGKD---QIVLN-HGKNFFICGVPTHCSDHGMKLEINVE 124 (124)
Q Consensus 82 ~~~~---~~~~~G~~---~v~l~-~G~~yfic~~~~hC~~~GmKl~I~V~ 124 (124)
.+.. .....|.+ +|+++ ||+|+|+|.+++||. ||+..|.|+
T Consensus 92 ~~~~~~t~~l~pGet~~v~f~~~~pG~y~f~C~~~~H~~--GM~G~i~V~ 139 (139)
T 2aan_A 92 SNIIAESPLANGNETVEVTFTAPAAGTYLYICTVPGHYP--LMQGKLVVN 139 (139)
T ss_dssp TTEEEECCCBCTTCEEEEEEECCSSEEEEEECCSTTTTT--TSEEEEEEC
T ss_pred ccccccccccCCCCEEEEEEECCCCeEEEEEcCCCChHH--cCEEEEEEC
Confidence 3211 12334433 44454 899999999999998 999999986
No 11
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.85 E-value=1.2e-08 Score=67.76 Aligned_cols=88 Identities=24% Similarity=0.305 Sum_probs=58.6
Q ss_pred EEecC-CCCCCccccCCCCCCeeeeCCEEEEEeCC-CCCeEEEECcCCCC----CCCC----CCCCcccccCC-cEEEeC
Q 048131 30 FKVGD-DGGWVFGVQNWPEGKTFKCGDILEFNYDP-QRHNVIIVDQEGHD----SCKP----ASDAKKFQTGK-DQIVLN 98 (124)
Q Consensus 30 ~~VG~-~~gW~~~~~~Wa~~~~f~vGD~L~F~y~~-~~h~V~~V~~~~y~----~C~~----~~~~~~~~~G~-~~v~l~ 98 (124)
..+|. +.++.+.++ ..++++||++.|.+.. ..|++...+.+.++ .+.. +........|. .+++++
T Consensus 3 V~~g~~~~~~~F~P~----~i~v~~G~tV~~~n~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf~ 78 (102)
T 1kdj_A 3 VEVGDEVGNFKFYPD----SITVSAGEAVEFTLVGETGHNIVFDIPAGAPGTVASELKAASMDENDLLSEDEPSFKAKVS 78 (102)
T ss_dssp EEESCTTCCCCEESS----EEEECTTCCEEEEECSSSCBCCEECCCTTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECCC
T ss_pred EEEecCCCccEEeCC----EEEECCCCEEEEEECCCCCeEEEEeCcccccccccchhhcccccccceecCCCCEEEEEeC
Confidence 45665 345666553 4789999999999875 47999876433321 1110 00011233343 367777
Q ss_pred -CcceEEEeCCCCCccCCCcEEEEEeC
Q 048131 99 -HGKNFFICGVPTHCSDHGMKLEINVE 124 (124)
Q Consensus 99 -~G~~yfic~~~~hC~~~GmKl~I~V~ 124 (124)
||+|.|+|. .||. .||+..|.|+
T Consensus 79 ~~G~y~y~C~--~H~~-~gM~G~i~V~ 102 (102)
T 1kdj_A 79 TPGTYTFYCT--PHKS-ANMKGTLTVK 102 (102)
T ss_dssp SCEEEEEECS--TTGG-GTCEEEEEEC
T ss_pred CCeEEEEEeC--CCcc-cCCeEEEEEC
Confidence 999999999 8999 9999999996
No 12
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.84 E-value=1e-08 Score=71.78 Aligned_cols=80 Identities=26% Similarity=0.354 Sum_probs=56.0
Q ss_pred cCCCCCCccccCCCCCCeeeeCCEEEEEeCCCCCeEEEECcCCCCCCCCCCCC-cccccCC-cEEEeC-CcceEEEeCCC
Q 048131 33 GDDGGWVFGVQNWPEGKTFKCGDILEFNYDPQRHNVIIVDQEGHDSCKPASDA-KKFQTGK-DQIVLN-HGKNFFICGVP 109 (124)
Q Consensus 33 G~~~gW~~~~~~Wa~~~~f~vGD~L~F~y~~~~h~V~~V~~~~y~~C~~~~~~-~~~~~G~-~~v~l~-~G~~yfic~~~ 109 (124)
|++.+..+.|+ ..++++||+|.|.++...|+|...+ .|.+.... .....|. .+++++ ||.|.|+|+
T Consensus 11 g~~g~~~F~P~----~i~V~~GdtV~f~n~~~~H~v~~~~-----~~~p~~~~~~~~~pG~t~~~tF~~~G~y~y~C~-- 79 (123)
T 1pmy_A 11 GPGGMMVFDPA----LVRLKPGDSIKFLPTDKGHNVETIK-----GMAPDGADYVKTTVGQEAVVKFDKEGVYGFKCA-- 79 (123)
T ss_dssp ETTEEEEEESS----EEEECTTCEEEEECSSSSCCCEECT-----TSSCTTCCCCBCCTTSCEEEECCSCEEEEEECS--
T ss_pred cCCCCceEeCC----EEEECCCCEEEEEECCCCcEEEEec-----ccCCCCccceecCCCCEEEEEeCCCeEEEEEeC--
Confidence 54444555553 4789999999999987789998752 12222111 1112233 378888 999999998
Q ss_pred CCccCCCcEEEEEeC
Q 048131 110 THCSDHGMKLEINVE 124 (124)
Q Consensus 110 ~hC~~~GmKl~I~V~ 124 (124)
.||. .||+..|+|.
T Consensus 80 ~H~~-~gM~G~I~V~ 93 (123)
T 1pmy_A 80 PHYM-MGMVALVVVG 93 (123)
T ss_dssp TTTT-TTCEEEEEES
T ss_pred Cccc-cCCEEEEEEc
Confidence 4999 9999999984
No 13
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.83 E-value=5.5e-09 Score=68.78 Aligned_cols=89 Identities=25% Similarity=0.390 Sum_probs=59.0
Q ss_pred EEEecC-CCCCCccccCCCCCCeeeeCCEEEEEeCCC-CCeEEEECc---CCCCCCCCCCCCcccccCCc-EEEeC-Ccc
Q 048131 29 TFKVGD-DGGWVFGVQNWPEGKTFKCGDILEFNYDPQ-RHNVIIVDQ---EGHDSCKPASDAKKFQTGKD-QIVLN-HGK 101 (124)
Q Consensus 29 ~~~VG~-~~gW~~~~~~Wa~~~~f~vGD~L~F~y~~~-~h~V~~V~~---~~y~~C~~~~~~~~~~~G~~-~v~l~-~G~ 101 (124)
+..+|+ +.++.+.++ ..++++||++.|.+... .|++...+. ++++.+..+........|.+ +++++ ||+
T Consensus 3 ~V~m~~~~~~~~F~P~----~i~v~~G~~V~~~n~~~~~H~~~~~~~~~p~~~~~~~~~~~~~~~~pG~~~~~tf~~~G~ 78 (98)
T 2plt_A 3 TVKLGADSGALEFVPK----TLTIKSGETVNFVNNAGFPHNIVFDEDAIPSGVNADAISRDDYLNAPGETYSVKLTAAGE 78 (98)
T ss_dssp EEEESCTTCCSSEESS----EEEECTTCEEEEEECSSCCEEEEECGGGSCTTCCHHHHCEEEEECSTTCEEEEECCSCEE
T ss_pred EEEEecCCCCceEeCC----EEEECCCCEEEEEECCCCceEEEEeCCCCCCccccccccccceecCCCCEEEEEeCCCeE
Confidence 445664 455776653 37899999999988764 799987532 12221111100112333443 67888 999
Q ss_pred eEEEeCCCCCccCCCcEEEEEeC
Q 048131 102 NFFICGVPTHCSDHGMKLEINVE 124 (124)
Q Consensus 102 ~yfic~~~~hC~~~GmKl~I~V~ 124 (124)
|.|+|. .||+ .||+..|.|+
T Consensus 79 y~y~C~--~H~~-~gM~G~i~V~ 98 (98)
T 2plt_A 79 YGYYCE--PHQG-AGMVGKIIVQ 98 (98)
T ss_dssp EEEECG--GGGG-GTCEEEEEEC
T ss_pred EEEEcC--Cccc-cCCeEEEEEC
Confidence 999999 6999 9999999986
No 14
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.82 E-value=3.2e-08 Score=65.92 Aligned_cols=89 Identities=28% Similarity=0.377 Sum_probs=58.5
Q ss_pred EEEecCC-CCCCccccCCCCCCeeeeCCEEEEEeCC-CCCeEEEECcCCCC-----CCCCCCCCcccccCC-cEEEe---
Q 048131 29 TFKVGDD-GGWVFGVQNWPEGKTFKCGDILEFNYDP-QRHNVIIVDQEGHD-----SCKPASDAKKFQTGK-DQIVL--- 97 (124)
Q Consensus 29 ~~~VG~~-~gW~~~~~~Wa~~~~f~vGD~L~F~y~~-~~h~V~~V~~~~y~-----~C~~~~~~~~~~~G~-~~v~l--- 97 (124)
+..+|.+ .++.+.++ ..++++||++.|.+.. ..|++...+....+ ....+........|. .++++
T Consensus 5 ~V~~~~~~~~~~F~P~----~i~v~~Gd~V~~~n~~~~~H~~~~~~~~~~~~~g~~~~~~~~~~~~~~pG~~~~~~f~~~ 80 (106)
T 2gim_A 5 TVKLGSDKGLLVFEPA----KLTIKPGDTVEFLNNKVPPHNVVFDAALNPAKSADLAKSLSHKQLLMSPGQSTSTTFPAD 80 (106)
T ss_dssp EEEESCTTCCSSEESS----EEEECTTCEEEEEECSSSCCCBEECSSSSTTCCHHHHHHHCBCSCCCSTTCEEEEECCTT
T ss_pred EEEEEecCCcceEcCC----EEEECCCCEEEEEECCCCCceEEEeCCCCcccccccchhccccceeeCCCCEEEEEEecC
Confidence 4556643 56777653 4789999999999775 47999865322110 000000011233343 46777
Q ss_pred C-CcceEEEeCCCCCccCCCcEEEEEeC
Q 048131 98 N-HGKNFFICGVPTHCSDHGMKLEINVE 124 (124)
Q Consensus 98 ~-~G~~yfic~~~~hC~~~GmKl~I~V~ 124 (124)
+ ||.|+|+|. .||+ .||+..|+|+
T Consensus 81 ~~~G~y~y~C~--~H~~-~GM~G~i~V~ 105 (106)
T 2gim_A 81 APAGEYTFYCE--PHRG-AGMVGKITVA 105 (106)
T ss_dssp CCSEEEEEECT--TTGG-GTCEEEEEEC
T ss_pred CCCceEEEEeC--Chhh-cCcEEEEEEc
Confidence 6 899999999 7999 9999999985
No 15
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.82 E-value=1.3e-08 Score=71.20 Aligned_cols=80 Identities=24% Similarity=0.297 Sum_probs=55.6
Q ss_pred cCCCCCCccccCCCCCCeeeeCCEEEEEeCCCCCeEEEECcCCCCCCCCCCCC-cccccCC-cEEEeC-CcceEEEeCCC
Q 048131 33 GDDGGWVFGVQNWPEGKTFKCGDILEFNYDPQRHNVIIVDQEGHDSCKPASDA-KKFQTGK-DQIVLN-HGKNFFICGVP 109 (124)
Q Consensus 33 G~~~gW~~~~~~Wa~~~~f~vGD~L~F~y~~~~h~V~~V~~~~y~~C~~~~~~-~~~~~G~-~~v~l~-~G~~yfic~~~ 109 (124)
|++.+..+.|+ ..++++||+|.|.+....|+|.... .|.+.... .....|. .+++++ ||.|.|+|+
T Consensus 11 g~~g~~~F~P~----~i~V~~GdtV~f~~~~~~H~v~~~~-----~~~p~~~~~~~~~pG~t~~~tF~~~G~y~y~C~-- 79 (123)
T 1paz_A 11 GAEGAMVFEPA----YIKANPGDTVTFIPVDKGHNVESIK-----DMIPEGAEKFKSKINENYVLTVTQPGAYLVKCT-- 79 (123)
T ss_dssp ETTEEEEEESS----EEEECTTCEEEEEESSSSCCCEECT-----TCSCTTCCCCBCCTTCCEEEECCSCEEEEEECT--
T ss_pred cCCCCceEeCC----EEEECCCCEEEEEECCCCeEEEEec-----ccCCCCccceecCCCCEEEEEeCCCEEEEEEeC--
Confidence 54444555553 4789999999999987789998641 12222111 1111233 378888 999999998
Q ss_pred CCccCCCcEEEEEeC
Q 048131 110 THCSDHGMKLEINVE 124 (124)
Q Consensus 110 ~hC~~~GmKl~I~V~ 124 (124)
.||. .||+..|+|.
T Consensus 80 ~H~~-~gM~G~I~V~ 93 (123)
T 1paz_A 80 PHYA-MGMIALIAVG 93 (123)
T ss_dssp TTGG-GTCEEEEEES
T ss_pred Cccc-CCCEEEEEEc
Confidence 4999 9999999984
No 16
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.81 E-value=2.4e-08 Score=65.96 Aligned_cols=88 Identities=23% Similarity=0.410 Sum_probs=58.7
Q ss_pred EEecC-CCCCCccccCCCCCCeeeeCCEEEEEeCCC-CCeEEEECcC---CCCCCCCC--CCCcccccCC-cEEEeC-Cc
Q 048131 30 FKVGD-DGGWVFGVQNWPEGKTFKCGDILEFNYDPQ-RHNVIIVDQE---GHDSCKPA--SDAKKFQTGK-DQIVLN-HG 100 (124)
Q Consensus 30 ~~VG~-~~gW~~~~~~Wa~~~~f~vGD~L~F~y~~~-~h~V~~V~~~---~y~~C~~~--~~~~~~~~G~-~~v~l~-~G 100 (124)
..+|+ +.+..+.|+ ..++++||+|.|.+... .|++...+.. +.+.+..+ ........|. .+++++ ||
T Consensus 3 v~m~~~~~~~~F~P~----~i~v~~G~tV~~~n~~~~~H~v~~~~~~~p~~~~~~~~~~~~~~~~~~~G~~~~~tf~~~G 78 (99)
T 1plc_A 3 VLLGADDGSLAFVPS----EFSISPGEKIVFKNNAGFPHNIVFDEDSIPSGVDASKISMSEEDLLNAKGETFEVALSNKG 78 (99)
T ss_dssp EEESCTTCCSCEESS----EEEECTTCEEEEEECSSCCBCCEECTTSSCTTCCHHHHCCCTTCCBCSTTCEEEEECCSCE
T ss_pred EEEecCCCcceEeCC----EEEECCCCEEEEEECCCCceEEEEeCCCCcccccccccccccCccccCCCCEEEEEECCCc
Confidence 34564 445666553 47899999999988864 7999876431 11111100 0001233343 377888 99
Q ss_pred ceEEEeCCCCCccCCCcEEEEEeC
Q 048131 101 KNFFICGVPTHCSDHGMKLEINVE 124 (124)
Q Consensus 101 ~~yfic~~~~hC~~~GmKl~I~V~ 124 (124)
+|.|+|. .||+ .||+..|+|+
T Consensus 79 ~y~~~C~--~H~~-~gM~G~i~V~ 99 (99)
T 1plc_A 79 EYSFYCS--PHQG-AGMVGKVTVN 99 (99)
T ss_dssp EEEEECG--GGTT-TTCEEEEEEC
T ss_pred eEEEEcC--CCcc-cCCEEEEEEC
Confidence 9999999 7999 9999999986
No 17
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.75 E-value=3.7e-08 Score=64.74 Aligned_cols=87 Identities=25% Similarity=0.358 Sum_probs=58.1
Q ss_pred EEEecCC-CCCCccccCCCCCCeeeeCCEEEEEeCC-CCCeEEEECcCC---CCCCCCCCCCcccccC-CcEEEeC-Ccc
Q 048131 29 TFKVGDD-GGWVFGVQNWPEGKTFKCGDILEFNYDP-QRHNVIIVDQEG---HDSCKPASDAKKFQTG-KDQIVLN-HGK 101 (124)
Q Consensus 29 ~~~VG~~-~gW~~~~~~Wa~~~~f~vGD~L~F~y~~-~~h~V~~V~~~~---y~~C~~~~~~~~~~~G-~~~v~l~-~G~ 101 (124)
+..+|++ .++.+.++ ..++++||++.|.+.. ..|++...+... .+.+.... .....| ..+++++ ||.
T Consensus 4 ~V~~~~~~~~~~F~P~----~i~v~~G~~V~~~n~~~~~H~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~tf~~~G~ 77 (97)
T 1b3i_A 4 QIKMGTDKYAPLYEPK----ALSISAGDTVEFVMNKVGPHNVIFDKVPAGESAPALSNTK--LAIAPGSFYSVTLGTPGT 77 (97)
T ss_dssp EEEEEETTTEEEEESS----EEEECTTCEEEEEECSSCCCCBEEEECCTTSCHHHHCBCC--CCCSCSCCEEEECCSCSE
T ss_pred EEEEeccCCccEEeCC----EEEECCCCEEEEEECCCCCeEEEEeCCCCccccccccccc--eecCCCCEEEEEeCCCeE
Confidence 3445543 45665553 4789999999999875 379998763221 00011111 122333 3477888 999
Q ss_pred eEEEeCCCCCccCCCcEEEEEeC
Q 048131 102 NFFICGVPTHCSDHGMKLEINVE 124 (124)
Q Consensus 102 ~yfic~~~~hC~~~GmKl~I~V~ 124 (124)
|.|+|. .||+ .||+..|.|+
T Consensus 78 y~y~C~--~H~~-~gM~G~i~V~ 97 (97)
T 1b3i_A 78 YSFYCT--PHRG-AGMVGTITVE 97 (97)
T ss_dssp EEEECS--STTT-TTCEEEEEEC
T ss_pred EEEEcc--Chhh-cCCEEEEEEC
Confidence 999999 8999 9999999986
No 18
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.74 E-value=2.6e-08 Score=70.12 Aligned_cols=81 Identities=25% Similarity=0.268 Sum_probs=57.9
Q ss_pred ecCCC-CCCccccCCCCCCeeeeCCEEEEEeCCCCCeEEEECcCCCCCCCCCCCC-cccccCC-cEEEeC-CcceEEEeC
Q 048131 32 VGDDG-GWVFGVQNWPEGKTFKCGDILEFNYDPQRHNVIIVDQEGHDSCKPASDA-KKFQTGK-DQIVLN-HGKNFFICG 107 (124)
Q Consensus 32 VG~~~-gW~~~~~~Wa~~~~f~vGD~L~F~y~~~~h~V~~V~~~~y~~C~~~~~~-~~~~~G~-~~v~l~-~G~~yfic~ 107 (124)
+|++. ++.+.|+ ..++++||++.|.++...|+|...+. +.+.+.. .....|. .+++++ ||.|.|+|.
T Consensus 10 ~g~~G~~~~F~P~----~i~V~~GDTV~f~n~~~~Hnv~~~~~-----~~p~g~~~~~~~pg~t~s~TF~~~G~y~Y~C~ 80 (124)
T 3ef4_A 10 KDDAGNTMVFQPG----FVKVEAGDTVKFVPTDKSHNAESVRE-----VWPEGVAPVKGGFSKEVVFNAEKEGLYVLKCA 80 (124)
T ss_dssp ECTTSCEEEEESS----EEEECTTCEEEEECSSSSCCCEECTT-----TSCTTSCCCBCCTTCCEEEECCSSEEEEEECT
T ss_pred cCCCCceeEEeCC----EEEECCCCEEEEEECCCCccEEEeCC-----cCCCCccccccCCCCEEEEEeCCCeEEEEEcC
Confidence 45443 3777764 47899999999999988899987532 2222211 1122333 478888 999999998
Q ss_pred CCCCccCCCcEEEEEeC
Q 048131 108 VPTHCSDHGMKLEINVE 124 (124)
Q Consensus 108 ~~~hC~~~GmKl~I~V~ 124 (124)
.||. .||+..|+|.
T Consensus 81 --~H~~-~GM~G~I~V~ 94 (124)
T 3ef4_A 81 --PHYG-MGMVVLVQVG 94 (124)
T ss_dssp --TTGG-GTCEEEEEES
T ss_pred --CCCc-CCCEEEEEEC
Confidence 5999 9999999984
No 19
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.72 E-value=1.7e-08 Score=70.71 Aligned_cols=76 Identities=21% Similarity=0.229 Sum_probs=54.3
Q ss_pred CCCccccCCCCCCeeeeCCEEEEEeCCCCCeEEEECcCCCCCCCCCCCC-cccccC-CcEEEeC-CcceEEEeCCCCCcc
Q 048131 37 GWVFGVQNWPEGKTFKCGDILEFNYDPQRHNVIIVDQEGHDSCKPASDA-KKFQTG-KDQIVLN-HGKNFFICGVPTHCS 113 (124)
Q Consensus 37 gW~~~~~~Wa~~~~f~vGD~L~F~y~~~~h~V~~V~~~~y~~C~~~~~~-~~~~~G-~~~v~l~-~G~~yfic~~~~hC~ 113 (124)
...+.|+ ..++++||++.|.+....|+|...+. +.+.+.. .....| ..+++++ ||.|+|+|. .||.
T Consensus 15 ~~~F~P~----~i~V~~GdtV~f~~~~~~H~v~~~~~-----~~P~g~~~f~~~pg~t~s~TF~~pG~y~y~C~--~H~~ 83 (123)
T 3erx_A 15 AMVFEPA----FVRAEPGDVINFVPTDKSHNVEAIKE-----ILPEGVESFKSKINESYTLTVTEPGLYGVKCT--PHFG 83 (123)
T ss_dssp EEEEESS----EEEECTTEEEEEEESSTTCCCEECTT-----SSCTTCCCCBCCTTCCEEEEECSCEEEEEECG--GGTT
T ss_pred cEeEeCC----EEEECCCCEEEEEECCCCceEEEcCC-----cCCCCccceecCCCCEEEEEeCCCeEEEEEeC--CCCc
Confidence 3555553 47899999999999977899987421 2222111 011123 3478888 999999999 6999
Q ss_pred CCCcEEEEEeC
Q 048131 114 DHGMKLEINVE 124 (124)
Q Consensus 114 ~~GmKl~I~V~ 124 (124)
.||+..|+|+
T Consensus 84 -~GM~G~I~V~ 93 (123)
T 3erx_A 84 -MGMVGLVQVG 93 (123)
T ss_dssp -TTCEEEEEES
T ss_pred -CCcEEEEEEC
Confidence 9999999985
No 20
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.69 E-value=4.5e-08 Score=68.97 Aligned_cols=81 Identities=22% Similarity=0.278 Sum_probs=56.8
Q ss_pred ecCCC-CCCccccCCCCCCeeeeCCEEEEEeCCCCCeEEEECcCCCCCCCCCCCC-cccccC-CcEEEeC-CcceEEEeC
Q 048131 32 VGDDG-GWVFGVQNWPEGKTFKCGDILEFNYDPQRHNVIIVDQEGHDSCKPASDA-KKFQTG-KDQIVLN-HGKNFFICG 107 (124)
Q Consensus 32 VG~~~-gW~~~~~~Wa~~~~f~vGD~L~F~y~~~~h~V~~V~~~~y~~C~~~~~~-~~~~~G-~~~v~l~-~G~~yfic~ 107 (124)
+|.+. +..+.|+ ..++++||+|.|.+....|+|...+. +.+.... .....| ..+++++ ||.|+|+|.
T Consensus 11 ~g~~g~~~~F~P~----~i~V~~GDtVtf~n~~~~H~v~~~~~-----~~P~g~~~f~s~pGet~s~TF~~pG~y~y~C~ 81 (127)
T 3tu6_A 11 KAADGRVMAFEPA----VIRAQPGDTVTFVAKDKGHNSALMKG-----GAPEGAETWKGKINEEITVTLSKPGVYMYQCA 81 (127)
T ss_dssp ECTTSCEEEEESS----EEEECTTCEEEEECSSSSCCCEECTT-----CSCTTCCCCBCCTTCCCEEECCSCEEEEEECT
T ss_pred cCCCCcccEEeCC----EEEECCCCEEEEEECCCCceEEEccC-----cCCCCccceecCCCCEEEEEeCCCeEEEEEeC
Confidence 46544 4666554 47899999999999977899987532 1111111 011123 3488888 999999999
Q ss_pred CCCCccCCCcEEEEEeC
Q 048131 108 VPTHCSDHGMKLEINVE 124 (124)
Q Consensus 108 ~~~hC~~~GmKl~I~V~ 124 (124)
.||. .||+..|.|+
T Consensus 82 --~H~~-~GM~G~I~V~ 95 (127)
T 3tu6_A 82 --PHVG-MGMIGAIVVG 95 (127)
T ss_dssp --TTGG-GTCEEEEEES
T ss_pred --CCCc-CCcEEEEEEC
Confidence 5999 9999999985
No 21
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.68 E-value=8.1e-08 Score=63.28 Aligned_cols=88 Identities=25% Similarity=0.438 Sum_probs=58.6
Q ss_pred EEecC-CCCCCccccCCCCCCeeeeCCEEEEEeCCC-CCeEEEECcC---CCCCCCCC--CCCcccccCC-cEEEeC-Cc
Q 048131 30 FKVGD-DGGWVFGVQNWPEGKTFKCGDILEFNYDPQ-RHNVIIVDQE---GHDSCKPA--SDAKKFQTGK-DQIVLN-HG 100 (124)
Q Consensus 30 ~~VG~-~~gW~~~~~~Wa~~~~f~vGD~L~F~y~~~-~h~V~~V~~~---~y~~C~~~--~~~~~~~~G~-~~v~l~-~G 100 (124)
..+|+ +.+..+.++ ..++++||+|.|.+... .|++...+.. .++.+... ........|. .+++++ ||
T Consensus 3 V~~~~~~~~~~F~P~----~i~v~~G~tV~~~n~~~~~H~~~~~~~~~p~g~~~~~~~~~~~~~~~~~G~~~~~~f~~~G 78 (99)
T 1byp_A 3 VLLGSSDGGLAFVPS----DLSIASGEKITFKNNAGFPHNDLFDKKEVPAGVDVTKISMPEEDLLNAPGEEYSVTLTEKG 78 (99)
T ss_dssp EEESCTTSCCSEESS----EEEECTTEEEEEEECSSCCBCCEECTTSSCTTCCHHHHSCCTTCCBCSTTCEEEEEECSCE
T ss_pred EEEecCCCcceEeCC----EEEECCCCEEEEEECCCCcceEEEeCCCCccccccccccccccceeeCCCCEEEEEeCCCc
Confidence 34554 455666553 46899999999998764 7998875421 12221100 0001233343 377888 99
Q ss_pred ceEEEeCCCCCccCCCcEEEEEeC
Q 048131 101 KNFFICGVPTHCSDHGMKLEINVE 124 (124)
Q Consensus 101 ~~yfic~~~~hC~~~GmKl~I~V~ 124 (124)
+|.|+|. .||+ .||+..|+|+
T Consensus 79 ~y~~~C~--~H~~-~gM~G~i~V~ 99 (99)
T 1byp_A 79 TYKFYCA--PHAG-AGMVGKVTVN 99 (99)
T ss_dssp EEEEECG--GGTT-TTCEEEEEEC
T ss_pred EEEEEcC--Cccc-cCCEEEEEEC
Confidence 9999999 7999 9999999985
No 22
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.60 E-value=4.2e-08 Score=64.57 Aligned_cols=89 Identities=25% Similarity=0.397 Sum_probs=57.5
Q ss_pred EEEecCC-CCCCccccCCCCCCeeeeCCEEEEEeCC-CCCeEEEECcCC--CCCCCCCCCCcccccCC-cEEEeC-Ccce
Q 048131 29 TFKVGDD-GGWVFGVQNWPEGKTFKCGDILEFNYDP-QRHNVIIVDQEG--HDSCKPASDAKKFQTGK-DQIVLN-HGKN 102 (124)
Q Consensus 29 ~~~VG~~-~gW~~~~~~Wa~~~~f~vGD~L~F~y~~-~~h~V~~V~~~~--y~~C~~~~~~~~~~~G~-~~v~l~-~G~~ 102 (124)
+..+|.+ .++.+.++ ..++++||++.|.+.. ..|++...+... -+....+........|. .+++++ ||+|
T Consensus 4 ~V~~~~~~~~~~F~P~----~i~v~~G~~V~~~n~~~~~H~~~~~~~~~pg~~~~~~~~~~~~~~pG~~~~~tf~~~G~y 79 (98)
T 1pcs_A 4 TVKMGSDSGALVFEPS----TVTIKAGEEVKWVNNKLSPHNIVFDADGVPADTAAKLSHKGLLFAAGESFTSTFTEPGTY 79 (98)
T ss_dssp EEEESCTTSCSSEESS----EEEECTTCEEEEEECSSCCEEEEECCSSSCHHHHHHHCEEEEECSTTCEEEEECCSCEEE
T ss_pred EEEEecCCCccEEeCC----EEEECCCCEEEEEECCCCCcEEEEeCCCCCccccccccccccccCCCCEEEEEcCCCeEE
Confidence 4455643 56776654 4789999999999875 479988753210 00000000011223343 367778 9999
Q ss_pred EEEeCCCCCccCCCcEEEEEeC
Q 048131 103 FFICGVPTHCSDHGMKLEINVE 124 (124)
Q Consensus 103 yfic~~~~hC~~~GmKl~I~V~ 124 (124)
.|+|. .||. .||+..|.|+
T Consensus 80 ~~~C~--~H~~-~gM~G~i~V~ 98 (98)
T 1pcs_A 80 TYYCE--PHRG-AGMVGKVVVE 98 (98)
T ss_dssp EEECG--GGTT-TTCEEEEEEC
T ss_pred EEEcC--Cccc-cCCeEEEEEC
Confidence 99999 6999 9999999996
No 23
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.12 E-value=9.7e-07 Score=58.56 Aligned_cols=65 Identities=20% Similarity=0.246 Sum_probs=44.2
Q ss_pred CCeeeeCCEEEEEeCC---CCCeEEEECcCCCCCCCCCCCCcccccCC-c--EEEeC-CcceEEEeCCCCCccCCCcEEE
Q 048131 48 GKTFKCGDILEFNYDP---QRHNVIIVDQEGHDSCKPASDAKKFQTGK-D--QIVLN-HGKNFFICGVPTHCSDHGMKLE 120 (124)
Q Consensus 48 ~~~f~vGD~L~F~y~~---~~h~V~~V~~~~y~~C~~~~~~~~~~~G~-~--~v~l~-~G~~yfic~~~~hC~~~GmKl~ 120 (124)
..++++||++.|.+.+ ..|++..-+ ... ......|. . .|+++ ||.|.|.|. .||. .||+..
T Consensus 29 ~i~v~~G~tV~~~~~n~d~~~H~~~~~~-~~~--------~~~~~pg~~~~~~~t~~~~G~Y~y~C~--~H~~-~gM~G~ 96 (100)
T 4hci_A 29 VITIPINESTTLLLKNKGKSEHTFTIKK-LGI--------DVVVESGKEKNITVKPKSAGTYELICR--YHLL-KGMEGK 96 (100)
T ss_dssp EEEECTTSCEEEEEEECSSSCEEEEEGG-GTE--------EEEECTTCEEEEEECCCSCEEEEEECT--TTGG-GTCEEE
T ss_pred EEEECCCCEEEEEEEcCCCceEEEEEec-CCc--------ceeecCCcceeEEEecccCceEEEECc--cccC-CCCEEE
Confidence 4799999999998753 247765421 111 01122232 2 45556 899999997 5999 999999
Q ss_pred EEeC
Q 048131 121 INVE 124 (124)
Q Consensus 121 I~V~ 124 (124)
|.||
T Consensus 97 i~Ve 100 (100)
T 4hci_A 97 VIVK 100 (100)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9997
No 24
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.10 E-value=4.6e-06 Score=58.43 Aligned_cols=76 Identities=18% Similarity=0.166 Sum_probs=48.9
Q ss_pred CCCccccCCCCCCeeeeCCEEEEEeCCC-CCeEEEECcCCCCCCCCCCCCcccccCC-cEEEeC-CcceEEEeCCCCCcc
Q 048131 37 GWVFGVQNWPEGKTFKCGDILEFNYDPQ-RHNVIIVDQEGHDSCKPASDAKKFQTGK-DQIVLN-HGKNFFICGVPTHCS 113 (124)
Q Consensus 37 gW~~~~~~Wa~~~~f~vGD~L~F~y~~~-~h~V~~V~~~~y~~C~~~~~~~~~~~G~-~~v~l~-~G~~yfic~~~~hC~ 113 (124)
++.+.| +..++++||++.|..... .|++...+... ..=.... .....|. .+++++ ||+|.|+|.. |.
T Consensus 54 ~~~F~P----~~i~V~~GdtV~~~N~d~~~H~v~~~~~~~-g~~~~~s--~~l~pG~t~~~tF~~~G~y~y~C~~--H~- 123 (132)
T 3c75_A 54 KMKYLT----PEVTIKAGETVYWVNGEVMPHNVAFKKGIV-GEDAFRG--EMMTKDQAYAITFNEAGSYDYFCTP--HP- 123 (132)
T ss_dssp TTEESS----SEEEECTTCEEEEEECSSSCBCCEECTTTS-SSSCEEC--CCBCTTEEEEEEECSCEEEEEECSS--CT-
T ss_pred eeEEeC----CEEEECCCCEEEEEECCCCceEEEEeCCCC-Ccccccc--cccCCCCEEEEEcCCCEEEEEEeCC--Cc-
Confidence 455444 347899999999997654 69988753221 0000000 1122333 367778 9999999996 53
Q ss_pred CCCcEEEEEeC
Q 048131 114 DHGMKLEINVE 124 (124)
Q Consensus 114 ~~GmKl~I~V~ 124 (124)
||+..|.|+
T Consensus 124 --gM~G~I~V~ 132 (132)
T 3c75_A 124 --FMRGKVIVE 132 (132)
T ss_dssp --TCEEEEEEC
T ss_pred --CCEEEEEEC
Confidence 899999986
No 25
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=98.02 E-value=2.4e-05 Score=51.46 Aligned_cols=87 Identities=26% Similarity=0.444 Sum_probs=55.7
Q ss_pred EEEecCC-CCCCccccCCCCCCeeeeCCEEEEEeCC-CCCeEEEECcCCCCCCCC-------CCCCcccccCCc-EEEe-
Q 048131 29 TFKVGDD-GGWVFGVQNWPEGKTFKCGDILEFNYDP-QRHNVIIVDQEGHDSCKP-------ASDAKKFQTGKD-QIVL- 97 (124)
Q Consensus 29 ~~~VG~~-~gW~~~~~~Wa~~~~f~vGD~L~F~y~~-~~h~V~~V~~~~y~~C~~-------~~~~~~~~~G~~-~v~l- 97 (124)
+..+|.+ .+..+.+. ..+++.||+|.|.... ..|++..-... + .+.. .........|.+ ++++
T Consensus 4 ~V~~~~~~~~~~f~p~----~i~v~~Gd~V~~~N~~~~~H~v~~~~~~-~-~~~~g~~~~~~~~~~~~i~pG~~~~~~f~ 77 (105)
T 3cvb_A 4 TVKMGADSGLFQFEPA----NVTVHPGDTVKWVNNKLPPHNILFDDKQ-V-PGASKELADKLSHSQLMFSPGESYEITFS 77 (105)
T ss_dssp EEEESCTTCCSCEESS----EEEECTTEEEEEEECSSCCEEEEECTTS-S-GGGCHHHHHHHCEEEEECSTTCEEEEEEC
T ss_pred EEEEeecCCccEEeCC----EEEEcCCCEEEEEECCCCCCeEEEeCCC-C-CcccccccccccccccccCCCCeEEEEEe
Confidence 4456643 56666543 3689999999998764 47998764211 1 1100 000012233433 6666
Q ss_pred --C-CcceEEEeCCCCCccCCCcEEEEEeC
Q 048131 98 --N-HGKNFFICGVPTHCSDHGMKLEINVE 124 (124)
Q Consensus 98 --~-~G~~yfic~~~~hC~~~GmKl~I~V~ 124 (124)
+ ||+|+|.|. .|+. .||+..|.|+
T Consensus 78 ~~~~~G~y~y~C~--~H~~-~GM~G~i~V~ 104 (105)
T 3cvb_A 78 SDFPAGTYTYYCA--PHRG-AGMVGKITVE 104 (105)
T ss_dssp TTSCSEEEEEECT--TTGG-GTCEEEEEEC
T ss_pred cCCCCeeEEEEeC--Cchh-cCCEEEEEEc
Confidence 6 899999999 6999 9999999985
No 26
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=97.90 E-value=3.2e-05 Score=53.59 Aligned_cols=78 Identities=23% Similarity=0.274 Sum_probs=51.9
Q ss_pred cCCCCCCccccCCCCCCeeeeCCEEEEEeCCCCCeEEEECcCCCCCCCCCCCCc-ccccC-CcEEEeC-CcceEEEeCCC
Q 048131 33 GDDGGWVFGVQNWPEGKTFKCGDILEFNYDPQRHNVIIVDQEGHDSCKPASDAK-KFQTG-KDQIVLN-HGKNFFICGVP 109 (124)
Q Consensus 33 G~~~gW~~~~~~Wa~~~~f~vGD~L~F~y~~~~h~V~~V~~~~y~~C~~~~~~~-~~~~G-~~~v~l~-~G~~yfic~~~ 109 (124)
|++.+..+.+. ..++++||+|.|......|+|...+. +-+..... ....| ..+++++ ||.|.|+|..
T Consensus 11 g~~g~~~F~P~----~i~V~~GdtV~f~n~d~~H~v~~~~~-----~~p~~~~~~~~~~g~t~~~tF~~~G~y~y~C~~- 80 (122)
T 2ux6_A 11 GKDGAMVFEPA----SLKVAPGDTVTFIPTDKGHNVETIKG-----MIPDGAEAFKSKINENYKVTFTAPGVYGVKCTP- 80 (122)
T ss_dssp ETTEEEEEESS----EEEECTTEEEEEEESSSSCCCEECTT-----CSCTTCCCCBCCTTCCEEEEECSCEEEEEEETT-
T ss_pred CCCCCceEeCC----EEEECCCCEEEEEECCCCcEEEEccc-----ccCCCcceeecCCCCEEEEEeCCCEEEEEEeCC-
Confidence 54434554443 46899999999999876899987531 11111111 11123 3478888 9999999996
Q ss_pred CCccCCCcEEEEEeC
Q 048131 110 THCSDHGMKLEINVE 124 (124)
Q Consensus 110 ~hC~~~GmKl~I~V~ 124 (124)
|.. |+..|.|.
T Consensus 81 -H~~---M~G~I~V~ 91 (122)
T 2ux6_A 81 -HPF---MVGVVQVG 91 (122)
T ss_dssp -EEE---EEEEEEES
T ss_pred -Ccc---CEEEEEEe
Confidence 876 99999884
No 27
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=97.85 E-value=5.4e-05 Score=53.15 Aligned_cols=90 Identities=12% Similarity=0.230 Sum_probs=54.7
Q ss_pred EEEecCCCCCCccccCCCCCCeeeeC-CEEEEEeCC--C------CCeEEEECcC----------------CCCCCCCCC
Q 048131 29 TFKVGDDGGWVFGVQNWPEGKTFKCG-DILEFNYDP--Q------RHNVIIVDQE----------------GHDSCKPAS 83 (124)
Q Consensus 29 ~~~VG~~~gW~~~~~~Wa~~~~f~vG-D~L~F~y~~--~------~h~V~~V~~~----------------~y~~C~~~~ 83 (124)
+..|+.++...+.++ ..+++.| |++.|.+.+ + .|+++..+.. +|..=+..+
T Consensus 4 ~v~i~~~d~m~F~p~----~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~ 79 (129)
T 1cuo_A 4 ETTVTSGDTMTYSTR----SISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKR 79 (129)
T ss_dssp EEEEEECSSSCCSCS----EEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTT
T ss_pred EEEEEeCCCceEccC----eEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhcccccccccccccc
Confidence 344554456666653 4688999 977666643 2 3999887543 221101111
Q ss_pred CC---cccccCCc---EEEe----CCcceEEEeCCCCCccCCCcEEEEEeC
Q 048131 84 DA---KKFQTGKD---QIVL----NHGKNFFICGVPTHCSDHGMKLEINVE 124 (124)
Q Consensus 84 ~~---~~~~~G~~---~v~l----~~G~~yfic~~~~hC~~~GmKl~I~V~ 124 (124)
-+ .....|.+ +|++ .||.|+|+|+.|+|=+ |||-.|+|+
T Consensus 80 ~~~~t~~l~pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~--~M~G~i~V~ 128 (129)
T 1cuo_A 80 VIAFTPIIGGGEKTSVKFKVSALSKDEAYTYFCSYPGHFS--MMRGTLKLE 128 (129)
T ss_dssp CSEECCCBCTTCEEEEEEEGGGCCTTSCEEEECCSTTCTT--TSEEEEEEE
T ss_pred ceeeeeEECCCCEEEEEEeccccCCCceEEEEeCCCCchH--cCEEEEEEe
Confidence 11 12334433 4443 2799999999999977 699999884
No 28
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=97.84 E-value=8.4e-05 Score=54.54 Aligned_cols=92 Identities=18% Similarity=0.273 Sum_probs=56.7
Q ss_pred eEEEEecCCCCCCccccCCCCCCee-eeCCEEEEEeC--CC------CCeEEEECcCC---------------CCCCCCC
Q 048131 27 ATTFKVGDDGGWVFGVQNWPEGKTF-KCGDILEFNYD--PQ------RHNVIIVDQEG---------------HDSCKPA 82 (124)
Q Consensus 27 a~~~~VG~~~gW~~~~~~Wa~~~~f-~vGD~L~F~y~--~~------~h~V~~V~~~~---------------y~~C~~~ 82 (124)
..+..|+.+++..+.++ ..++ +.||++.|.+. .+ .|+++..+..+ |-.=+..
T Consensus 42 ~~~V~I~~~d~m~F~P~----~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~ 117 (167)
T 3ay2_A 42 NCAATVESNDNMQFNTK----DIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDA 117 (167)
T ss_dssp CCEEEEEECTTSCBSCS----EEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCT
T ss_pred ceEEEEEeCCCceEecc----eEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhcccccccccccc
Confidence 34666776667776654 3577 78997666654 33 29998875432 2110111
Q ss_pred CC---CcccccCCc-EEEeC-----CcceEEEeCCCCCccCCCcEEEEEeC
Q 048131 83 SD---AKKFQTGKD-QIVLN-----HGKNFFICGVPTHCSDHGMKLEINVE 124 (124)
Q Consensus 83 ~~---~~~~~~G~~-~v~l~-----~G~~yfic~~~~hC~~~GmKl~I~V~ 124 (124)
+. ......|.+ +++++ ||.|.|+|++++|=+ |||..|+|+
T Consensus 118 ~vl~~t~~l~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~--gM~G~i~V~ 166 (167)
T 3ay2_A 118 RVVAHTKLIGGGEESSLTLDPAKLADGDYKFACTFPGHGA--LMNGKVTLV 166 (167)
T ss_dssp TEEEECCCBCTTCEEEEEECGGGGTTSCEEEECCSTTGGG--TSEEEEEEE
T ss_pred chhccceeeCCCCEEEEEEecCCCCCcEEEEEcCCCCchh--cCEEEEEEe
Confidence 10 112334433 55553 799999999999977 799999984
No 29
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=97.74 E-value=8e-05 Score=49.90 Aligned_cols=69 Identities=20% Similarity=0.200 Sum_probs=45.5
Q ss_pred CCeeeeCCEEEEEeCCC-CCeEEEECcCCCCCCCCCCCCcccccCC-cEEEeC-CcceEEEeCCCCCccCCCcEEEEEeC
Q 048131 48 GKTFKCGDILEFNYDPQ-RHNVIIVDQEGHDSCKPASDAKKFQTGK-DQIVLN-HGKNFFICGVPTHCSDHGMKLEINVE 124 (124)
Q Consensus 48 ~~~f~vGD~L~F~y~~~-~h~V~~V~~~~y~~C~~~~~~~~~~~G~-~~v~l~-~G~~yfic~~~~hC~~~GmKl~I~V~ 124 (124)
..++++||+|.|..... .|++...+... ..=...+ .....|. .+++++ ||.|.|.|.. |. ||+..|.|+
T Consensus 35 ~i~V~~G~tV~~~N~d~~~H~v~~~~~~~-~~~~~~s--~~l~~g~~~~~tf~~~G~y~~~C~~--H~---~M~G~I~V~ 106 (106)
T 1id2_A 35 EVTIKAGETVYWVNGEVMPHNVAFKKGIV-GEDAFRG--EMMTKDQAYAITFNEAGSYDYFCTP--HP---FMRGKVIVE 106 (106)
T ss_dssp EEEECTTCEEEEEECSSSCBCCEECTTTS-SSSCEEC--CCBCTTEEEEEEECSCEEEEEECSS--CT---TCEEEEEEC
T ss_pred EEEECCCCEEEEEECCCCcEEEEEeCCCC-Ccccccc--cccCCCCEEEEEeCCCEEEEEEeCC--CC---CCEEEEEEC
Confidence 47899999999997654 69987643220 0000000 1122343 367778 9999999997 64 899999986
No 30
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=97.72 E-value=7.1e-05 Score=49.92 Aligned_cols=81 Identities=17% Similarity=0.180 Sum_probs=52.8
Q ss_pred eEEEEecCCCCCCccccCCCCCCeeeeCCEEEEEeCCC-CCeEEEECcCC----CCCCCCCCCCcccccCC-cEEEeC-C
Q 048131 27 ATTFKVGDDGGWVFGVQNWPEGKTFKCGDILEFNYDPQ-RHNVIIVDQEG----HDSCKPASDAKKFQTGK-DQIVLN-H 99 (124)
Q Consensus 27 a~~~~VG~~~gW~~~~~~Wa~~~~f~vGD~L~F~y~~~-~h~V~~V~~~~----y~~C~~~~~~~~~~~G~-~~v~l~-~ 99 (124)
+.++.|-- .+|.+.+. ..++++||+|.|..... .|+|...+..+ |+. .....|. .+++++ |
T Consensus 18 a~~~~V~~-~~~~F~P~----~i~v~~Gd~V~~~N~d~~~H~v~~~~~~~g~~~~~~-------~~~~pG~~~~~tf~~~ 85 (105)
T 2ov0_A 18 DGAIVVDI-AKMKYETP----ELHVKVGDTVTWINREAMPHNVHFVAGVLGEAALKG-------PMMKKEQAYSLTFTEA 85 (105)
T ss_dssp TTCEEEEE-ETTEESSS----EEEECTTCEEEEEECSSSCBCCEECTTTSSSSCEEC-------CCBCTTEEEEEEECSC
T ss_pred CcCEEEEE-eecEEcCC----EEEECCCCEEEEEECCCCCEEEEEcCCCCCcccccc-------cccCCCCEEEEEeCCC
Confidence 44454432 35665543 47899999999987754 79987643211 211 1122333 367778 9
Q ss_pred cceEEEeCCCCCccCCCcEEEEEeC
Q 048131 100 GKNFFICGVPTHCSDHGMKLEINVE 124 (124)
Q Consensus 100 G~~yfic~~~~hC~~~GmKl~I~V~ 124 (124)
|.|+|.|.. | .||+..|.|+
T Consensus 86 G~y~y~C~~--H---~gM~G~i~V~ 105 (105)
T 2ov0_A 86 GTYDYHCTP--H---PFMRGKVVVE 105 (105)
T ss_dssp EEEEEECSS--C---TTCEEEEEEC
T ss_pred EEEEEEeCC--C---CCCEEEEEEC
Confidence 999999997 4 3899999986
No 31
>1iko_P Ephrin-B2; greek KEY, glycosylation, signaling protein; HET: NAG MAN; 1.92A {Mus musculus} SCOP: b.6.1.5
Probab=97.70 E-value=2e-05 Score=58.62 Aligned_cols=74 Identities=19% Similarity=0.347 Sum_probs=49.9
Q ss_pred eeeCCEEEEE---eCCC------CCeEEEECcCCCCCCCCCC-CCccc--c--cCCcEEEe--------------CCc-c
Q 048131 51 FKCGDILEFN---YDPQ------RHNVIIVDQEGHDSCKPAS-DAKKF--Q--TGKDQIVL--------------NHG-K 101 (124)
Q Consensus 51 f~vGD~L~F~---y~~~------~h~V~~V~~~~y~~C~~~~-~~~~~--~--~G~~~v~l--------------~~G-~ 101 (124)
+++||.|-+- |+.+ .+.+++|++++|+.|+... +...+ . .+...|++ .|| .
T Consensus 26 v~igD~LdIiCP~~~~~~~~~~E~~~LY~Vs~~~y~~C~~~~~~~~l~~C~~P~~~~kftikFq~fsP~p~GlEF~pg~~ 105 (178)
T 1iko_P 26 PQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKENTPLLNCARPDQDVKFTIKFQEFSPNLWGLEFQKNKD 105 (178)
T ss_dssp CCTTCEEEEECCCCCSSSCSCCCBEEEEEECHHHHHHTBCCTTCCCSEEECCTTSCCEEEEECCSSCSSTTCCCCCTTEE
T ss_pred ecCCCEEEEECCCCCCCCCCCceEEEEEEECHHHhhhcccCCCCcEEEEecCCCCCEEEEEEEEecCCCCCcccccCCCc
Confidence 4569999886 3321 3789999999999998763 22111 1 12233332 366 7
Q ss_pred eEEEeCCC-----------CCccCCCcEEEEEeC
Q 048131 102 NFFICGVP-----------THCSDHGMKLEINVE 124 (124)
Q Consensus 102 ~yfic~~~-----------~hC~~~GmKl~I~V~ 124 (124)
|||||.-. |.|...+|||.|.|.
T Consensus 106 YY~IstS~G~~~gl~~~~gG~C~t~~Mkl~ikV~ 139 (178)
T 1iko_P 106 YYIISTSNGSLEGLDNQEGGVCQTRAMKILMKVG 139 (178)
T ss_dssp EEEECCCCBSGGGTTCCBSHHHHHSCCEEEEEET
T ss_pred eEEEecCCcccccccccCCCccccceeEEEEEee
Confidence 88998854 799966999999884
No 32
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=97.61 E-value=0.00034 Score=48.97 Aligned_cols=90 Identities=14% Similarity=0.280 Sum_probs=52.0
Q ss_pred EEEecCCCCCCccccCCCCCCee-eeCCEEEEEeC--CC------CCeEEEECcC----------------CCCCCCCCC
Q 048131 29 TFKVGDDGGWVFGVQNWPEGKTF-KCGDILEFNYD--PQ------RHNVIIVDQE----------------GHDSCKPAS 83 (124)
Q Consensus 29 ~~~VG~~~gW~~~~~~Wa~~~~f-~vGD~L~F~y~--~~------~h~V~~V~~~----------------~y~~C~~~~ 83 (124)
+..|+.+++..+.++ ..++ +.||++.|.+. .. .|+++..+.+ +|..=+.++
T Consensus 4 ~v~v~~~d~m~F~p~----~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (129)
T 2ccw_A 4 EATVESNDAMQYNVK----EIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTR 79 (129)
T ss_dssp EEEEEECTTSCBSCS----EEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTT
T ss_pred EEEEEeCCCccEecc----eEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhccccccccccccc
Confidence 344554455666553 2455 66997666664 33 2999887543 232101111
Q ss_pred C---CcccccCCc-EEEe-----CCcc-eEEEeCCCCCccCCCcEEEEEeC
Q 048131 84 D---AKKFQTGKD-QIVL-----NHGK-NFFICGVPTHCSDHGMKLEINVE 124 (124)
Q Consensus 84 ~---~~~~~~G~~-~v~l-----~~G~-~yfic~~~~hC~~~GmKl~I~V~ 124 (124)
- ......|.+ ++++ .+|. |.|+|++|+|=+ |||-.|+|+
T Consensus 80 ~~~~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~--gM~G~i~V~ 128 (129)
T 2ccw_A 80 VIAHTKVIGGGESDSVTFDVSKIAAGENYAYFCSFPGHWA--MMKGTLKLG 128 (129)
T ss_dssp EEEECCCBCTTCEEEEEEEGGGSCTTCCEEEECCSTTGGG--TSEEEEEEC
T ss_pred ceeeeeEECCCCEEEEEEeccccCCCceEEEEeCCCChhH--cCEEEEEEe
Confidence 0 112334433 4444 2554 999999999977 799999985
No 33
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=97.53 E-value=0.00068 Score=47.40 Aligned_cols=89 Identities=18% Similarity=0.305 Sum_probs=52.0
Q ss_pred EEecCCCCCCccccCCCCCCee-eeCCEEEEEeC--CC------CCeEEEECcC----------------CCCCCCCCCC
Q 048131 30 FKVGDDGGWVFGVQNWPEGKTF-KCGDILEFNYD--PQ------RHNVIIVDQE----------------GHDSCKPASD 84 (124)
Q Consensus 30 ~~VG~~~gW~~~~~~Wa~~~~f-~vGD~L~F~y~--~~------~h~V~~V~~~----------------~y~~C~~~~~ 84 (124)
..|+.+++..+.++ ..++ +.||++.|.+. .. .|+++..+.+ +|-.=+.++-
T Consensus 4 v~v~~~d~m~F~p~----~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~ 79 (128)
T 2iaa_C 4 VSIEGNDSMQFNTK----SIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERV 79 (128)
T ss_dssp EEEEECTTSCBSCS----EEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTE
T ss_pred EEEEeCCCceEecC----EEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchh
Confidence 34454456666653 2455 66997666664 32 2999877433 2321011110
Q ss_pred ---CcccccCCc-EEEeC-----Cc-ceEEEeCCCCCccCCCcEEEEEeC
Q 048131 85 ---AKKFQTGKD-QIVLN-----HG-KNFFICGVPTHCSDHGMKLEINVE 124 (124)
Q Consensus 85 ---~~~~~~G~~-~v~l~-----~G-~~yfic~~~~hC~~~GmKl~I~V~ 124 (124)
......|.+ +++++ +| +|.|+|++|+|=+ |||-.|+|.
T Consensus 80 ~~~t~~l~pGes~~vtf~~~~l~~G~~Y~f~C~~PgH~~--gM~G~i~V~ 127 (128)
T 2iaa_C 80 IAHTSVIGGGETDSVTFDVSKLKEGEDYAFFCSFPGHWS--IMKGTIELG 127 (128)
T ss_dssp EEECCCBCTTCEEEEEEESSCCCTTCCEEEECCSTTCTT--TSEEEEEEC
T ss_pred hccceeeCCCCEEEEEEeccccCCCceEEEEECCCChhH--CCEEEEEEe
Confidence 112334433 44443 58 4999999999976 899999984
No 34
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=97.45 E-value=0.00083 Score=46.97 Aligned_cols=90 Identities=19% Similarity=0.282 Sum_probs=53.8
Q ss_pred EEEecCCCCCCccccCCCCCCee-eeCCEEEEEeC--CCC------CeEEEECcCC----------------CCCCCCCC
Q 048131 29 TFKVGDDGGWVFGVQNWPEGKTF-KCGDILEFNYD--PQR------HNVIIVDQEG----------------HDSCKPAS 83 (124)
Q Consensus 29 ~~~VG~~~gW~~~~~~Wa~~~~f-~vGD~L~F~y~--~~~------h~V~~V~~~~----------------y~~C~~~~ 83 (124)
+..|+.+++..+.++ ..++ +.||++.|.+. ... |+++..+.++ |-.=+.++
T Consensus 4 ~v~v~~~d~m~F~p~----~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~ 79 (128)
T 1nwp_A 4 KVTVDSTDQMSFNTK----DIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDAR 79 (128)
T ss_dssp EEEEEECTTSCBSCS----EEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTT
T ss_pred EEEEEeCCCccEecC----EEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccch
Confidence 344555556776654 3577 78997766664 322 9998864322 21101011
Q ss_pred CC---cccccCCc-EEEeC-----Ccc-eEEEeCCCCCccCCCcEEEEEeC
Q 048131 84 DA---KKFQTGKD-QIVLN-----HGK-NFFICGVPTHCSDHGMKLEINVE 124 (124)
Q Consensus 84 ~~---~~~~~G~~-~v~l~-----~G~-~yfic~~~~hC~~~GmKl~I~V~ 124 (124)
-+ .....|.+ +++++ +|. |.|+|++|+|=+ |||-.|+|+
T Consensus 80 ~~~~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~PgH~~--gM~G~i~V~ 128 (128)
T 1nwp_A 80 VIAHTKVIGAGEKDSVTFDVSKLAAGEKYGFFCSFPGHIS--MMKGTVTLK 128 (128)
T ss_dssp EEEECCCBCTTCEEEEEEEGGGSCTTSCEEEECCSTTCGG--GSEEEEEEC
T ss_pred hheeeeeeCCCCEEEEEEeccccCCCceEEEEECCCChhH--CCEEEEEEC
Confidence 01 12334433 45443 566 999999999977 799999985
No 35
>3d12_B Ephrin-B3; beta propeller, protein-receptor complex, envelope protein, glycoprotein, hemagglutinin, hydrolase, membrane, signal-AN transmembrane; HET: NAG BMA MAN BGC LXZ NGA GL0 GLC LXB NGZ GXL; 3.00A {Mus musculus}
Probab=97.13 E-value=0.00096 Score=47.81 Aligned_cols=75 Identities=16% Similarity=0.224 Sum_probs=48.8
Q ss_pred eeeeCCEEEEEe---CC---------CCCeEEEECcCCCCCCCCC-CCCcccc----cCCc--------------EEEeC
Q 048131 50 TFKCGDILEFNY---DP---------QRHNVIIVDQEGHDSCKPA-SDAKKFQ----TGKD--------------QIVLN 98 (124)
Q Consensus 50 ~f~vGD~L~F~y---~~---------~~h~V~~V~~~~y~~C~~~-~~~~~~~----~G~~--------------~v~l~ 98 (124)
.+++||.|-+-= +. ....+++|++++|++|+.. .+...+. .+.. .+.+.
T Consensus 23 ~V~i~D~ldIiCP~~~~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~~~kft~kFq~fsP~p~G~EF~ 102 (141)
T 3d12_B 23 YPQIGDRLDLLCPRARPPGPHSSPSYEFYKLYLVEGAQGRRCEAPPAPNLLLTCDRPDLDLRFTIKFQEYSPNLWGHEFR 102 (141)
T ss_dssp CCCTTCEEEEEECCCSSCCTTCCSSCCCCEEEEECSHHHHTTBCCSSCEEEEECCCSSSCEEEEEESSSCCSCCSCCCCC
T ss_pred EecCCCEEEEECCCCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCeEEEEeCCCCCCeEEEEEEEEcCCCCCceeee
Confidence 567889997763 32 2456899999999999876 2321111 1222 23334
Q ss_pred Cc-ceEEEeCC-----------CCCccCCCcEEEEEeC
Q 048131 99 HG-KNFFICGV-----------PTHCSDHGMKLEINVE 124 (124)
Q Consensus 99 ~G-~~yfic~~-----------~~hC~~~GmKl~I~V~ 124 (124)
|| .||||++= +|-|....|||.|.|.
T Consensus 103 pG~~YY~ISts~G~~~gl~~~~gG~C~t~~Mkl~i~V~ 140 (141)
T 3d12_B 103 SHHDYYIIATSDGTREGLESLQGGVCLTRGMKVLLRVG 140 (141)
T ss_dssp TTCEEEEEECSCSSTTTTTCCBCSHHHHTCCEEEEECC
T ss_pred CCCeEEEEecCCCCcccccccCCCccccceEEEEEEec
Confidence 66 57788763 3579966999999984
No 36
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=96.81 E-value=0.00067 Score=45.28 Aligned_cols=66 Identities=18% Similarity=0.228 Sum_probs=43.1
Q ss_pred CCeeeeCCEEEEEeCC---CCCeEEEECcCCCCCCCCCCCCcccccCCc-EEEe--C-CcceEEEeCCCCCccCCCcEEE
Q 048131 48 GKTFKCGDILEFNYDP---QRHNVIIVDQEGHDSCKPASDAKKFQTGKD-QIVL--N-HGKNFFICGVPTHCSDHGMKLE 120 (124)
Q Consensus 48 ~~~f~vGD~L~F~y~~---~~h~V~~V~~~~y~~C~~~~~~~~~~~G~~-~v~l--~-~G~~yfic~~~~hC~~~GmKl~ 120 (124)
..+++.||++.|.+.+ ..|++..-+. + .......|.+ ++++ + ||.|+|.|.. ||...+|+..
T Consensus 39 ~i~v~~G~~V~~~~~n~d~~~H~~~i~~~-~--------~~~~i~pG~~~~~~f~~~~~G~y~~~C~~--~~~~~~M~g~ 107 (112)
T 1iby_A 39 TLVVKKGDAVKVVVENKSPISEGFSIDAF-G--------VQEVIKAGETKTISFTADKAGAFTIWCQL--HPKNIHLPGT 107 (112)
T ss_dssp EEEEETTCEEEEEEEECSSSCEEEEEGGG-T--------EEEEECTTCEEEEEEECCSCEEEEEBCSS--SCTTTBCCEE
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEcCC-C--------ceeEeCCCCEEEEEEECCCCEEEEEECCC--CCchHHCEEE
Confidence 4689999999997753 2588754221 1 0112333433 4444 6 8999999997 6752459999
Q ss_pred EEeC
Q 048131 121 INVE 124 (124)
Q Consensus 121 I~V~ 124 (124)
|.|+
T Consensus 108 i~V~ 111 (112)
T 1iby_A 108 LNVV 111 (112)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9884
No 37
>2x11_B Ephrin-A5; receptor-signaling protein complex, developmental protein, signaling platform, kinase, transferase, neurogenesis, receptor, cataract; 4.83A {Homo sapiens}
Probab=96.64 E-value=0.00098 Score=49.44 Aligned_cols=75 Identities=21% Similarity=0.380 Sum_probs=45.0
Q ss_pred CeeeeCCEEEEE---eCC-------CCCeEEEECcCCCCCCCCCCCC-c------ccc-cCCcEE--------------E
Q 048131 49 KTFKCGDILEFN---YDP-------QRHNVIIVDQEGHDSCKPASDA-K------KFQ-TGKDQI--------------V 96 (124)
Q Consensus 49 ~~f~vGD~L~F~---y~~-------~~h~V~~V~~~~y~~C~~~~~~-~------~~~-~G~~~v--------------~ 96 (124)
..+++||.|-+- |+. ....+++|++++|++|+..+.. . +.. .|+..| .
T Consensus 52 i~V~i~D~LDIiCP~y~~~~~~~~~E~y~LY~Vs~e~y~~C~~~~~~~~~~~C~~P~~p~~~~kftikFQ~FSP~p~G~E 131 (177)
T 2x11_B 52 IDVCINDYLDVFCPHYEDSVPEDKTERYVLYMVNFDGYSACDHTSKGFKRWECNRPHSPNGPLKFSEKFQLFTPFSLGFE 131 (177)
T ss_dssp EEECTTCEEEEECCCCCSSSCSSSCCCEEEEEECHHHHHHTCCTTTEEEEEEECCTTCSSSSCEEEEECCSSCSSTTCCC
T ss_pred EEecCCCEEEEECCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCcEEEEeCCCCCCCCCeEEEEEEEEcCCCCCCcc
Confidence 568899999775 331 2456789999999999875422 1 111 123322 2
Q ss_pred eCCc-ceEEEeCCCCCccCCC--cEEEEEeC
Q 048131 97 LNHG-KNFFICGVPTHCSDHG--MKLEINVE 124 (124)
Q Consensus 97 l~~G-~~yfic~~~~hC~~~G--mKl~I~V~ 124 (124)
+.|| .||||++=.++=. .| |||.|.|.
T Consensus 132 F~pG~~YYyISTS~~~~~-g~~ClrLkV~V~ 161 (177)
T 2x11_B 132 FRPGREYFYISSAIPDNG-RRSCLKLKVFVR 161 (177)
T ss_dssp CCTTEEEEEEEEESSCCC-SSSCCEEEEEEC
T ss_pred ccCCCeEEEEecCCCCCC-CCcceEEEEEEE
Confidence 3367 5778865322211 22 89999874
No 38
>2wo3_B Ephrin-A2; transferase-signaling protein complex, EFN, EPHA4, KINA ephrin, complex, membrane, cell surface receptor, tyrosine- kinase, glycoprotein; HET: NAG; 2.35A {Homo sapiens}
Probab=96.29 E-value=0.0048 Score=44.88 Aligned_cols=35 Identities=26% Similarity=0.468 Sum_probs=25.7
Q ss_pred CeeeeCCEEEEE---eCCC--------CCeEEEECcCCCCCCCCCC
Q 048131 49 KTFKCGDILEFN---YDPQ--------RHNVIIVDQEGHDSCKPAS 83 (124)
Q Consensus 49 ~~f~vGD~L~F~---y~~~--------~h~V~~V~~~~y~~C~~~~ 83 (124)
..+++||.|-+- |+.+ ...+++|++++|++|+...
T Consensus 32 i~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~~~y~~C~~~~ 77 (157)
T 2wo3_B 32 VEVSINDYLDIYCPHYGAPLPPAERMEHYVLYMVNGEGHASCDHRQ 77 (157)
T ss_dssp EEECTTCEEEEECCCCCSSCCCGGGSCCEEEEEECHHHHHHTCCTT
T ss_pred EEeccCCEEEEECCCCCCCCCCCCCceEEEEEEECHHHhccccCCC
Confidence 357889999876 3211 2347899999999998764
No 39
>1shx_A Ephrin-A5; ephrin signaling, hormone-growth factor complex; HET: NAG; 2.10A {Mus musculus} SCOP: b.6.1.5 PDB: 1shw_A* 3mx0_B*
Probab=96.18 E-value=0.0053 Score=43.78 Aligned_cols=75 Identities=21% Similarity=0.380 Sum_probs=44.9
Q ss_pred CeeeeCCEEEEE---eCC-------CCCeEEEECcCCCCCCCCCCCC-c------ccc-cCCcEE--------------E
Q 048131 49 KTFKCGDILEFN---YDP-------QRHNVIIVDQEGHDSCKPASDA-K------KFQ-TGKDQI--------------V 96 (124)
Q Consensus 49 ~~f~vGD~L~F~---y~~-------~~h~V~~V~~~~y~~C~~~~~~-~------~~~-~G~~~v--------------~ 96 (124)
..+++||.|-+- |+. ....+++|++++|++|+..+.. . +.. .++..| .
T Consensus 23 i~V~i~D~lDIiCP~~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~p~~~~kftikFq~fsP~p~G~E 102 (138)
T 1shx_A 23 IDVCINDYLDVFCPHYEDSVPEDKTERYVLYMVNFDGYSACDHTSKGFKRWECNRPHSPNGPLKFSEKFQLFTPFSLGFE 102 (138)
T ss_dssp EEECTTCEEEEECCCCCTTCCSTTCCCEEEEEECHHHHHTTCSSSSEEEEEEECCTTCTTSSCEEEEECCSCCSSTTCCC
T ss_pred EEecCCCEEEEECCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCCEEEEeCCCCCCCCCeEEEEEEEEcCCCCCcee
Confidence 457889999775 331 1456789999999999875421 1 111 133222 2
Q ss_pred eCCc-ceEEEeCCCCCccCCC--cEEEEEeC
Q 048131 97 LNHG-KNFFICGVPTHCSDHG--MKLEINVE 124 (124)
Q Consensus 97 l~~G-~~yfic~~~~hC~~~G--mKl~I~V~ 124 (124)
+.|| .||||++=.++=. .| |||.|.|.
T Consensus 103 F~pG~~YY~ISts~~~~~-g~~ClrL~V~V~ 132 (138)
T 1shx_A 103 FRPGREYFYISSAIPDNG-RRSCLKLKVFVR 132 (138)
T ss_dssp CCTTEEEEEEEEESSCCS-CSCCCEEEEEEC
T ss_pred ecCCCeEEEEEcCCCCCC-CCceeEEEEEEE
Confidence 3366 5778865332211 23 89999873
No 40
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=96.08 E-value=0.025 Score=39.59 Aligned_cols=66 Identities=18% Similarity=0.239 Sum_probs=43.2
Q ss_pred CCeeeeCCEEEEEeCCC--CCeEEEECcCCCCCCCCCCCCcccccCC---cEEEeC-CcceEEEeCCCCCccC--CCcEE
Q 048131 48 GKTFKCGDILEFNYDPQ--RHNVIIVDQEGHDSCKPASDAKKFQTGK---DQIVLN-HGKNFFICGVPTHCSD--HGMKL 119 (124)
Q Consensus 48 ~~~f~vGD~L~F~y~~~--~h~V~~V~~~~y~~C~~~~~~~~~~~G~---~~v~l~-~G~~yfic~~~~hC~~--~GmKl 119 (124)
..++.+||++.|..++. .|++..- ++. .......|. -.++++ ||.|+|.|+. +|-. .+|+.
T Consensus 61 ~l~Vp~G~~V~~~vts~DV~Hsf~ip---~~~------~k~d~~PG~~~~~~~~~~~~G~y~~~C~e--~CG~~H~~M~g 129 (135)
T 2cua_A 61 PIEVPQGAEIVFKITSPDVIHGFHVE---GTN------INVEVLPGEVSTVRYTFKRPGEYRIICNQ--YCGLGHQNMFG 129 (135)
T ss_dssp SEEEETTSEEEEEEEBSSSCEEEEET---TSS------CEEEECBTBCEEEEEECCSCEEEEEECCS--CCSTTSTTCEE
T ss_pred EEEEcCCCEEEEEEEeCCccceEEec---CCC------ceeEeCCCCcEEEEEEcCCCEEEEEECcc--cCCCCcCCCEE
Confidence 57899999999998643 5776541 111 001122343 356677 8999999987 3431 57999
Q ss_pred EEEeC
Q 048131 120 EINVE 124 (124)
Q Consensus 120 ~I~V~ 124 (124)
.|.|+
T Consensus 130 ~v~V~ 134 (135)
T 2cua_A 130 TIVVK 134 (135)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99874
No 41
>2vsm_B Ephrin-B2; developmental protein, henipavirus, neurogenesis, glycoprotein, paramyxovirus, envelope protein, cell surface receptor, hendra, virion; HET: NAG; 1.80A {Homo sapiens} PDB: 2wo2_B* 2i85_A 3gxu_B 2vsk_B 2hle_B 1kgy_E
Probab=96.07 E-value=0.0054 Score=43.79 Aligned_cols=74 Identities=18% Similarity=0.322 Sum_probs=46.9
Q ss_pred eeeCCEEEEEeC---CC------CCeEEEECcCCCCCCCCCC-CCcccc----cCCcE--------------EEeCCc-c
Q 048131 51 FKCGDILEFNYD---PQ------RHNVIIVDQEGHDSCKPAS-DAKKFQ----TGKDQ--------------IVLNHG-K 101 (124)
Q Consensus 51 f~vGD~L~F~y~---~~------~h~V~~V~~~~y~~C~~~~-~~~~~~----~G~~~--------------v~l~~G-~ 101 (124)
+++||.|-+-=+ .+ ...+++|++++|++|+... +...+. .+... +.+.|| .
T Consensus 25 v~i~D~ldIiCP~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~~~kft~kFq~fsP~~~G~eF~~g~~ 104 (140)
T 2vsm_B 25 PQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKENTPLLNCAKPDQDIKFTIKFQEFSPNLWGLEFQKNKD 104 (140)
T ss_dssp CCTTCEEEEEECCCC---CCCCCBEEEEEECHHHHHHTBCCTTCCCSEEECCTTSCEEEEEESSSCCSCSSCCCCCTTEE
T ss_pred ecCCCEEEEECCCCCCCCCCCceEEEEEEECHHHhhhcccCCCCcEEEEecCCCCCEEEEEEEEecCCCCCcccccCCCc
Confidence 457999988633 21 3678889999999998763 221110 12222 223366 5
Q ss_pred eEEEeCCC-----------CCccCCCcEEEEEeC
Q 048131 102 NFFICGVP-----------THCSDHGMKLEINVE 124 (124)
Q Consensus 102 ~yfic~~~-----------~hC~~~GmKl~I~V~ 124 (124)
||||++=. |-|....|||.|.|.
T Consensus 105 YY~Ists~g~~~gl~~~~gG~C~t~~mkl~i~V~ 138 (140)
T 2vsm_B 105 YYIISTSNGSLEGLDNQEGGVCQTRAMKILMKVG 138 (140)
T ss_dssp EEEECCCCBSGGGTTCCBSHHHHHSCCEEEEEET
T ss_pred eEEEecCCCCccccccccCCccccceEEEEEEec
Confidence 77776622 479977999999884
No 42
>3czu_B Ephrin-A1; ATP-binding, kinase, nucleotide-binding, receptor, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG MAN; 2.65A {Homo sapiens} PDB: 3mbw_B*
Probab=95.93 E-value=0.0061 Score=45.35 Aligned_cols=61 Identities=16% Similarity=0.314 Sum_probs=33.8
Q ss_pred HhhcccceeEEEEecCCCCCCccccCC---CCCCeeeeCCEEEEE---eCCC--------CCeEEEECcCCCCCCCCCC
Q 048131 19 LMHCNIGSATTFKVGDDGGWVFGVQNW---PEGKTFKCGDILEFN---YDPQ--------RHNVIIVDQEGHDSCKPAS 83 (124)
Q Consensus 19 ~~~~~~a~a~~~~VG~~~gW~~~~~~W---a~~~~f~vGD~L~F~---y~~~--------~h~V~~V~~~~y~~C~~~~ 83 (124)
++.++.+++..+.| =|+..-... --...+++||.|-+- |+.+ ...+++|++++|++|+..+
T Consensus 21 ~~~~~~~sa~rh~V----yWNSsNp~F~~~~y~i~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~e~y~sC~~~~ 95 (182)
T 3czu_B 21 YFQGAMDAADRHTV----FWNSSNPKFRNEDYTIHVQLNDYVDIICPHYEDHSVADAAMEQYILYLVEHEEYQLCQPQS 95 (182)
T ss_dssp --------CCEEEE----ECSTTCGGGTTSCCEEEECTTCEEEEECCCCC--CCCGGGSCCEEEEEECHHHHHHTCCCC
T ss_pred HHhhhhhhccccce----EEcCCCccccCCCceEEeccCCEEEEECCCCCCCCCCCCCceEEEEEEECHHHhhhccCCC
Confidence 34444455666665 476431111 123467899999775 3321 3567899999999998763
No 43
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=95.17 E-value=0.067 Score=38.98 Aligned_cols=68 Identities=16% Similarity=0.168 Sum_probs=43.6
Q ss_pred CCCeeeeCCEEEEEeCCC--CCeEEEECcCCCCCCCCCCCCcccccCC---cEEEeC-CcceEEEeCC-CCCccCCCcEE
Q 048131 47 EGKTFKCGDILEFNYDPQ--RHNVIIVDQEGHDSCKPASDAKKFQTGK---DQIVLN-HGKNFFICGV-PTHCSDHGMKL 119 (124)
Q Consensus 47 ~~~~f~vGD~L~F~y~~~--~h~V~~V~~~~y~~C~~~~~~~~~~~G~---~~v~l~-~G~~yfic~~-~~hC~~~GmKl 119 (124)
....+.+|+.+.|.-++. .|+...- ++. -......|. ..++.+ ||.||+.|+. .|+-- ++|+.
T Consensus 93 n~l~VP~G~~Vr~~vTS~DViHsf~IP---~lg------ik~da~PG~~n~~~~~~~kpG~y~g~Cse~CG~~H-s~M~g 162 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSPDVIHGFHVE---GTN------INVEVLPGEVSTVRYTFKRPGEYRIICNQYCGLGH-QNMFG 162 (168)
T ss_dssp SSEEEETTSEEEEEEECSSSCEEEEET---TSS------CEEEECTTBCEEEEEECCSCEEEEEECCSCCSTTG-GGCEE
T ss_pred CEEEEeCCCeEEEEEecCCceEEEEEC---CCC------eEEEecCCceeEEEEEeCCCEEEEEECCcCCCCCc-CCCEE
Confidence 346788999999987653 4666542 111 001112233 356667 9999999996 34444 67999
Q ss_pred EEEeC
Q 048131 120 EINVE 124 (124)
Q Consensus 120 ~I~V~ 124 (124)
.|.|+
T Consensus 163 ~V~V~ 167 (168)
T 3s8f_B 163 TIVVK 167 (168)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99985
No 44
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=94.45 E-value=0.4 Score=33.35 Aligned_cols=84 Identities=14% Similarity=0.253 Sum_probs=48.3
Q ss_pred ecCCCCCCccccCCCCCCeeee-CCEEEEEeCC-C-------CCeEEEECcC----------------CCCCCCCCCCC-
Q 048131 32 VGDDGGWVFGVQNWPEGKTFKC-GDILEFNYDP-Q-------RHNVIIVDQE----------------GHDSCKPASDA- 85 (124)
Q Consensus 32 VG~~~gW~~~~~~Wa~~~~f~v-GD~L~F~y~~-~-------~h~V~~V~~~----------------~y~~C~~~~~~- 85 (124)
|-.++...+.++ ..++.. |+++.|.+.+ + .|+++..+.+ +|-.=+.++-+
T Consensus 7 i~~~d~M~F~p~----~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via 82 (125)
T 3fsa_A 7 IQGNDQMQFNTN----AITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIA 82 (125)
T ss_dssp EEBCTTSCBSCS----EEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCE
T ss_pred EEccCCcEEecC----EEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCcccee
Confidence 333445555543 245543 9998777753 3 3999987422 23211111111
Q ss_pred --cccccCCc-EEEeC-C-----cceEEEeCCCCCccCCCcEEEEEeC
Q 048131 86 --KKFQTGKD-QIVLN-H-----GKNFFICGVPTHCSDHGMKLEINVE 124 (124)
Q Consensus 86 --~~~~~G~~-~v~l~-~-----G~~yfic~~~~hC~~~GmKl~I~V~ 124 (124)
.....|.+ +++++ | |.|-|+|+ +|= |||-.|.|.
T Consensus 83 ~t~~l~pGes~~vtf~~~~l~~~G~y~f~C~--gH~---~M~G~v~V~ 125 (125)
T 3fsa_A 83 HTKLIGSGEKDSVTFDVSKLKEGEQYMFFCA--AHA---AMKGTLTLK 125 (125)
T ss_dssp ECCCBCTTCEEEEEEEGGGC---CCEEEECS--SST---TCEEEEEEC
T ss_pred ccceeCCCcEEEEEEeCcCcCCCccEEEEcC--CCC---CcEEEEEEC
Confidence 12344543 56655 4 99999999 674 899999884
No 45
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=94.37 E-value=0.035 Score=44.89 Aligned_cols=74 Identities=18% Similarity=0.252 Sum_probs=47.4
Q ss_pred CCCCeeeeCCEEEEEeCCC---CCeEEEECcCCCCCCCCCCCCcccccCCcEEEeC-CcceEEEeCCCCCccCCCcEEEE
Q 048131 46 PEGKTFKCGDILEFNYDPQ---RHNVIIVDQEGHDSCKPASDAKKFQTGKDQIVLN-HGKNFFICGVPTHCSDHGMKLEI 121 (124)
Q Consensus 46 a~~~~f~vGD~L~F~y~~~---~h~V~~V~~~~y~~C~~~~~~~~~~~G~~~v~l~-~G~~yfic~~~~hC~~~GmKl~I 121 (124)
....+++.||+++|++.+. .|++..-.......|- +..-.+-.-.|+++ +|+++|.|..++|=. .||+..|
T Consensus 54 ~p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~~~~~~----i~pG~~~~~~f~~~~~Gt~~y~~~~~~h~~-~Gm~G~i 128 (447)
T 2dv6_A 54 NPTLVVHEGETVQVNLVNGEGAQHDVVVDQYAARSAIV----NGKNASSTFSFVASKVGEFNYYCSIAGHRQ-AGMEGNI 128 (447)
T ss_dssp SCCEEEETTCEEEEEEECSSSSCBCCEETTTTEECCCB----CSTTBEEEEEEECCSCEEEEEECCSTTHHH-HTCEEEE
T ss_pred CCeEEEcCCCEEEEEEEcCCCCceEEEEccCCccccee----cCCCCeEEEEEEcCCCEEEEEEeCCCChhh-CCCEEEE
Confidence 4557899999999988642 3776432211111222 11111112245556 899999999999988 8999998
Q ss_pred EeC
Q 048131 122 NVE 124 (124)
Q Consensus 122 ~V~ 124 (124)
.|+
T Consensus 129 ~V~ 131 (447)
T 2dv6_A 129 QVL 131 (447)
T ss_dssp EEE
T ss_pred EEe
Confidence 874
No 46
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.79 E-value=0.11 Score=45.06 Aligned_cols=66 Identities=21% Similarity=0.349 Sum_probs=43.8
Q ss_pred CCeeeeCCEEEEEeCCC------CCeEEEECcCCCCCCCCCCCCcccccCC---cEEEeC-CcceEEEeCCCCCccC--C
Q 048131 48 GKTFKCGDILEFNYDPQ------RHNVIIVDQEGHDSCKPASDAKKFQTGK---DQIVLN-HGKNFFICGVPTHCSD--H 115 (124)
Q Consensus 48 ~~~f~vGD~L~F~y~~~------~h~V~~V~~~~y~~C~~~~~~~~~~~G~---~~v~l~-~G~~yfic~~~~hC~~--~ 115 (124)
..++.+||++.|..++. .|+...-+ +. .......|. ..|+.+ ||.|+|.|+. .|-. .
T Consensus 559 eI~VP~GdtVrfiLTN~D~veDViHSF~IPs---lG------IK~DaiPGrtnsvtFtadkPGvY~y~CSE--~CGa~Hs 627 (638)
T 3sbq_A 559 EFTVKQGDEVTVTITNIDQIEDVSHGFVVVN---HG------VSMEISPQQTSSITFVADKPGLHWYYCSW--FCHALHM 627 (638)
T ss_dssp EEEEETTCEEEEEEEECCCSTTCCEEEEETT---TT------EEEEECTTCEEEEEEECCSCEEEEEECCS--CCSTTCT
T ss_pred EEEEecCceeEEEEecCCcCCCceeeeEecC---CC------ceeeeCCCCeEEEEEEcCCCEEEEEECCC--cCCCCcc
Confidence 46899999999987652 58776521 11 001122343 256667 9999999998 5661 3
Q ss_pred CcEEEEEeC
Q 048131 116 GMKLEINVE 124 (124)
Q Consensus 116 GmKl~I~V~ 124 (124)
+|+..|.||
T Consensus 628 ~M~G~ViVE 636 (638)
T 3sbq_A 628 EMVGRMMVE 636 (638)
T ss_dssp TCEEEEEEE
T ss_pred cceEEEEEe
Confidence 499999985
No 47
>3l6w_A Hemocyanin 1; cupredoxin domain, copper-binding protein, metal-binding, oxygen binding; 4.00A {Megathura crenulata} PDB: 3qjo_A
Probab=91.53 E-value=0.13 Score=43.38 Aligned_cols=75 Identities=12% Similarity=0.173 Sum_probs=48.5
Q ss_pred CeeeeCCEEEEEeCCC--CCeEEEE-CcCCCCCCCCCCCCcccccCCcEEEeCCcceEEEeCCCCCccCCCc-EEEEEeC
Q 048131 49 KTFKCGDILEFNYDPQ--RHNVIIV-DQEGHDSCKPASDAKKFQTGKDQIVLNHGKNFFICGVPTHCSDHGM-KLEINVE 124 (124)
Q Consensus 49 ~~f~vGD~L~F~y~~~--~h~V~~V-~~~~y~~C~~~~~~~~~~~G~~~v~l~~G~~yfic~~~~hC~~~Gm-Kl~I~V~ 124 (124)
.-++.|..|.|.=-.. ...+..+ +-.+...|..+-.....-.=+.+..|.||.|||..+...-|+ +|- |+.|.||
T Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 491 (491)
T 3l6w_A 413 VVVKRGTKIMFMSVDEAVTTPMLNLGSYTAMFKCKVPPFSFHAFELGKMYSVESGDYFMTASTTELCN-DNNLRIHVHVD 491 (491)
T ss_pred eEeecCCEEEEEecccchhhHHHhhhhhhhhhccccCCCccCcccccceEecCCCceEecCChHHHHh-CCceeEEEEeC
Confidence 4577888888854321 1122222 334445688763321111123467788999999999999999 887 9999997
No 48
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=91.42 E-value=0.39 Score=41.28 Aligned_cols=66 Identities=21% Similarity=0.266 Sum_probs=42.5
Q ss_pred CCeeeeCCEEEEEeCCC------CCeEEEECcCCCCCCCCCCCCcccccCCc---EEEeC-CcceEEEeCCCCCccC--C
Q 048131 48 GKTFKCGDILEFNYDPQ------RHNVIIVDQEGHDSCKPASDAKKFQTGKD---QIVLN-HGKNFFICGVPTHCSD--H 115 (124)
Q Consensus 48 ~~~f~vGD~L~F~y~~~------~h~V~~V~~~~y~~C~~~~~~~~~~~G~~---~v~l~-~G~~yfic~~~~hC~~--~ 115 (124)
..++++||++.|...+. .|++..-+ ... ......|.+ .|+++ ||.|||.|.. +|-. .
T Consensus 514 ~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~-~gv--------~~~i~PG~t~t~~Fta~~pGtY~yhC~e--~Cg~~H~ 582 (595)
T 1fwx_A 514 SFTVKEGDEVTVIVTNLDEIDDLTHGFTMGN-YGV--------AMEIGPQMTSSVTFVAANPGVYWYYCQW--FCHALHM 582 (595)
T ss_dssp EEEEETTCEEEEEEEECCCSTTCCEEEEETT-TTE--------EEEECTTCEEEEEEECCSCEEEEEECCS--CCSTTCT
T ss_pred EEEEECCCEEEEEEEeCCCCCCceeeEEecC-CCc--------ceeeCCCCeEEEEEECCCCEEEEEECCC--CCCCCcc
Confidence 46789999999997641 57776422 111 012223432 56677 9999999995 2321 5
Q ss_pred CcEEEEEeC
Q 048131 116 GMKLEINVE 124 (124)
Q Consensus 116 GmKl~I~V~ 124 (124)
||+..|.|+
T Consensus 583 gM~G~IiV~ 591 (595)
T 1fwx_A 583 EMRGRMLVE 591 (595)
T ss_dssp TCEEEEEEE
T ss_pred CCEEEEEEE
Confidence 899999884
No 49
>3hei_B Ephrin-A1; EPH receptor tyrosine kinase, cell membrane, disulfi glycoprotein, GPI-anchor, lipoprotein, membrane, ATP-bindin kinase; 2.00A {Homo sapiens} SCOP: b.6.1.0
Probab=91.32 E-value=0.19 Score=35.48 Aligned_cols=35 Identities=17% Similarity=0.323 Sum_probs=25.7
Q ss_pred CeeeeCCEEEEEeC---CC--------CCeEEEECcCCCCCCCCCC
Q 048131 49 KTFKCGDILEFNYD---PQ--------RHNVIIVDQEGHDSCKPAS 83 (124)
Q Consensus 49 ~~f~vGD~L~F~y~---~~--------~h~V~~V~~~~y~~C~~~~ 83 (124)
..+++||.|-+-=+ .+ ...++.|++++|++|+..+
T Consensus 22 v~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~~~y~~C~~~~ 67 (132)
T 3hei_B 22 IHVQLNDYVDIICPHYEDHSVADAAMEQYILYLVEHEEYQLCQPQS 67 (132)
T ss_dssp EEECTTCEEEEECCCCCTTSSCGGGCCCEEEEEECHHHHHHTCCSC
T ss_pred EEeCCCCeEEEECCCCCCCCCCCCCccEEEEEEeCHHHhccccCCC
Confidence 45688999977432 21 3567899999999998764
No 50
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=83.51 E-value=1.1 Score=34.78 Aligned_cols=73 Identities=19% Similarity=0.206 Sum_probs=44.0
Q ss_pred CCeeeeCCEEEEEeCCC-----CCeEEEECcCCCCCCCCCCCCcccccCCc---EEEeC-CcceEEEeCCCC-----Ccc
Q 048131 48 GKTFKCGDILEFNYDPQ-----RHNVIIVDQEGHDSCKPASDAKKFQTGKD---QIVLN-HGKNFFICGVPT-----HCS 113 (124)
Q Consensus 48 ~~~f~vGD~L~F~y~~~-----~h~V~~V~~~~y~~C~~~~~~~~~~~G~~---~v~l~-~G~~yfic~~~~-----hC~ 113 (124)
..+++.||+|++++.+. .|.+..-...+.+. ..+......|.+ .|+++ +|++||-|...+ |=.
T Consensus 65 ~i~~~~Gd~v~v~~~N~~~~~h~Hg~~~~~~~~~~~---~~~~~~i~PG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~~ 141 (333)
T 1mzy_A 65 LMIVHEGDYVELTLINPPENTMPHNIDFHAATGALG---GGGLTLINPGEKVVLRFKATRAGAFVYHCAPGGPMIPWHVV 141 (333)
T ss_dssp EEEEETTCEEEEEEEECTTCCSCBCCEETTSCSGGG---GGGGCCBCTTEEEEEEEECCSCEEEEEECCCSTTHHHHHHH
T ss_pred cEEecCCCEEEEEEEECCCCcccccceecCCCCCCC---CCceeEeCCCCEEEEEEECCCCEEEEEeecCCcccchhhhh
Confidence 46789999999988653 36665322111110 011112333433 55556 899999998764 666
Q ss_pred CCCcEEEEEeC
Q 048131 114 DHGMKLEINVE 124 (124)
Q Consensus 114 ~~GmKl~I~V~ 124 (124)
.||.-.+.|+
T Consensus 142 -~Gl~G~~iV~ 151 (333)
T 1mzy_A 142 -SGMAGCIMVL 151 (333)
T ss_dssp -TTCEEEEEEE
T ss_pred -CCCEEEEEEc
Confidence 7998887763
No 51
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=83.32 E-value=1.3 Score=34.30 Aligned_cols=73 Identities=18% Similarity=0.254 Sum_probs=43.5
Q ss_pred CCeeeeCCEEEEEeCCC-----CCeEEEECcCCCCCCCCCCCCcccccCCc---EEEeC-CcceEEEeCCCC----CccC
Q 048131 48 GKTFKCGDILEFNYDPQ-----RHNVIIVDQEGHDSCKPASDAKKFQTGKD---QIVLN-HGKNFFICGVPT----HCSD 114 (124)
Q Consensus 48 ~~~f~vGD~L~F~y~~~-----~h~V~~V~~~~y~~C~~~~~~~~~~~G~~---~v~l~-~G~~yfic~~~~----hC~~ 114 (124)
..+++.||+|++++.+. .|++..=.....+ ...+......|.+ .|+++ +|++||-|...+ |=.
T Consensus 66 ~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~~~---~~~~~~~i~pG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~- 141 (336)
T 1oe1_A 66 TLVVHEGDYVQLTLVNPATNAMPHNVDFHGATGAL---GGAKLTNVNPGEQATLRFKADRSGTFVYHCAPEGMVPWHVV- 141 (336)
T ss_dssp CEEEETTCEEEEEEEECTTCCSCBCCEETTSCSGG---GGGGGCCBCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHH-
T ss_pred eEEEcCCCEEEEEEEcCCCCCccccceECCCCCCC---CCcceEEeCCCCEEEEEEECCCCeEEEEecCCCCchhHHHh-
Confidence 46789999999888642 4665442111000 0011112333433 45556 899999999754 445
Q ss_pred CCcEEEEEeC
Q 048131 115 HGMKLEINVE 124 (124)
Q Consensus 115 ~GmKl~I~V~ 124 (124)
.||.-.+.|+
T Consensus 142 ~Gl~G~liV~ 151 (336)
T 1oe1_A 142 SGMSGTLMVL 151 (336)
T ss_dssp TTCEEEEEEE
T ss_pred CCCeEEEEEe
Confidence 7999888773
No 52
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=80.70 E-value=1.3 Score=34.39 Aligned_cols=74 Identities=26% Similarity=0.332 Sum_probs=41.7
Q ss_pred CCCeeeeCCEEEEEeCCC-----CCeEEEECcCCCCCCCCCCCCcccccCCc---EEEeC-CcceEEEeCCC---CCccC
Q 048131 47 EGKTFKCGDILEFNYDPQ-----RHNVIIVDQEGHDSCKPASDAKKFQTGKD---QIVLN-HGKNFFICGVP---THCSD 114 (124)
Q Consensus 47 ~~~~f~vGD~L~F~y~~~-----~h~V~~V~~~~y~~C~~~~~~~~~~~G~~---~v~l~-~G~~yfic~~~---~hC~~ 114 (124)
...+++.||++++++.+. .|++..=-....|. .+. ......|.+ .|+.+ +|++||-|... .|=.
T Consensus 70 P~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~~~dG--~~~-~~~i~PG~~~~y~f~~~~~Gt~wyH~h~~~~~~~~~- 145 (327)
T 1kbv_A 70 RMIRVREGDTVEVEFSNNPSSTVPHNVDFHAATGQGG--GAA-ATFTAPGRTSTFSFKALQPGLYIYHCAVAPVGMHIA- 145 (327)
T ss_dssp CBEEEETTCEEEEEEEECTTCSSCBCCEETTCCSGGG--GTT-TTCBCTTEEEEEEEECCSCEEEEEECCCSSHHHHHH-
T ss_pred CeEEEeCCCEEEEEEEECCCCCCceeeEeCccccCCC--CCc-ceeecCCCEEEEEEECCCCeEEEEEeCCCChhhhhh-
Confidence 346889999999987643 35543210000110 000 111233432 45556 89999999753 3445
Q ss_pred CCcEEEEEeC
Q 048131 115 HGMKLEINVE 124 (124)
Q Consensus 115 ~GmKl~I~V~ 124 (124)
.||...|.|+
T Consensus 146 ~Gl~G~~iV~ 155 (327)
T 1kbv_A 146 NGMYGLILVE 155 (327)
T ss_dssp TTCEEEEEEE
T ss_pred cceEEEEEEe
Confidence 7999888764
No 53
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=76.24 E-value=1.2 Score=35.72 Aligned_cols=83 Identities=27% Similarity=0.348 Sum_probs=44.9
Q ss_pred CCccccCCCCCCeeeeCCEEEEEeCCC-----CCeEEEECcCCCCCCCCCCCCcccccCCc---EEEeC-CcceEEEeC-
Q 048131 38 WVFGVQNWPEGKTFKCGDILEFNYDPQ-----RHNVIIVDQEGHDSCKPASDAKKFQTGKD---QIVLN-HGKNFFICG- 107 (124)
Q Consensus 38 W~~~~~~Wa~~~~f~vGD~L~F~y~~~-----~h~V~~V~~~~y~~C~~~~~~~~~~~G~~---~v~l~-~G~~yfic~- 107 (124)
|.++-+--....+++.||++++++.+. .|++..=-....+. .. .......|.. .|+.+ +|++||-|-
T Consensus 51 ~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~~dG--~~-~~~~i~pg~~~~y~f~~~~~Gt~~yH~H~ 127 (442)
T 2zoo_A 51 WSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTGPGG--GA-ESSFTAPGHTSTFNFKALNPGLYIYHCAT 127 (442)
T ss_dssp EEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCSGGG--GG-GGCCBCTTCEEEEEEECCSCEEEEEECCC
T ss_pred EEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcCCCC--CC-ccEEECCCCEEEEEEEcCCCeEEEEecCC
Confidence 554322223456889999999988643 34443210000010 00 0011233433 45556 899999994
Q ss_pred --CCCCccCCCcEEEEEeC
Q 048131 108 --VPTHCSDHGMKLEINVE 124 (124)
Q Consensus 108 --~~~hC~~~GmKl~I~V~ 124 (124)
...|=. .||...+.|+
T Consensus 128 ~~~~~~~~-~Gl~G~~iv~ 145 (442)
T 2zoo_A 128 APVGMHIA-NGMYGLILVE 145 (442)
T ss_dssp SSHHHHHH-TTCEEEEEEE
T ss_pred CChHHHHh-CccEEEEEEe
Confidence 345666 8998887764
No 54
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=68.77 E-value=4 Score=31.06 Aligned_cols=85 Identities=18% Similarity=0.317 Sum_probs=45.0
Q ss_pred CCccccCCCCCCeeeeCCEEEEEeCCC---CCeEEEE--CcCCCCCCCCCCCCcccccCCc---EEEeC-CcceEEEeCC
Q 048131 38 WVFGVQNWPEGKTFKCGDILEFNYDPQ---RHNVIIV--DQEGHDSCKPASDAKKFQTGKD---QIVLN-HGKNFFICGV 108 (124)
Q Consensus 38 W~~~~~~Wa~~~~f~vGD~L~F~y~~~---~h~V~~V--~~~~y~~C~~~~~~~~~~~G~~---~v~l~-~G~~yfic~~ 108 (124)
|.++-+--....+++.||+++.++.+. .|++.-= .....|.= +.........|.+ .|+.+ +|++||-|-.
T Consensus 57 ~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~~~~~DG~-p~~~~~~i~PG~~~~y~f~~~~~Gt~~yH~H~ 135 (288)
T 3gdc_A 57 WSYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVHRATMDGT-PGIGAGSIAPGQSFTYEFDATPFGTHLYHCHQ 135 (288)
T ss_dssp EEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEESSCCCGGGSCC-TTSTTCSBCTTCEEEEEEECCSCEEEEEECCC
T ss_pred EEECCccCCCcEEEeCCCEEEEEEEeCCCCcccEEeccccccccCCC-CCccceeECCCCEEEEEEEcCCCccEEEEecC
Confidence 554322222346889999999988642 2333221 00111100 0000012223433 55666 8999999987
Q ss_pred C---CCccCCCcEEEEEeC
Q 048131 109 P---THCSDHGMKLEINVE 124 (124)
Q Consensus 109 ~---~hC~~~GmKl~I~V~ 124 (124)
. .|=. .||.-.+.|+
T Consensus 136 ~~~~~~~~-~Gl~G~liV~ 153 (288)
T 3gdc_A 136 SPLAPHIA-KGLYGGFIVE 153 (288)
T ss_dssp SSHHHHHH-TTCEEEEEEE
T ss_pred cchHHHHh-CcCeEEEEEe
Confidence 6 3556 8998887764
No 55
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=67.88 E-value=6 Score=30.56 Aligned_cols=73 Identities=18% Similarity=0.216 Sum_probs=43.0
Q ss_pred CCeeeeCCEEEEEeCCC-----CCeEEEECcCCCCCCCCCCCCcccccCCc---EEEeC-CcceEEEeCCCC----CccC
Q 048131 48 GKTFKCGDILEFNYDPQ-----RHNVIIVDQEGHDSCKPASDAKKFQTGKD---QIVLN-HGKNFFICGVPT----HCSD 114 (124)
Q Consensus 48 ~~~f~vGD~L~F~y~~~-----~h~V~~V~~~~y~~C~~~~~~~~~~~G~~---~v~l~-~G~~yfic~~~~----hC~~ 114 (124)
..+++.||++++++.+. .|++..=.....+ + ..+......|.+ .|+++ +|++||-|...+ |=.
T Consensus 72 ~i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~~~--~-~~~~~~i~PG~~~~y~~~~~~~Gt~wyH~h~~~~~~~~~~- 147 (340)
T 2bw4_A 72 LMVVHENDYVELRLINPDTNTLLHNIDFHAATGAL--G-GGALTQVNPGEETTLRFKATKPGVFVYHCAPEGMVPWHVT- 147 (340)
T ss_dssp EEEEETTCEEEEEEEECTTCCSCBCCEETTSCSGG--G-GGGGCCBCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHH-
T ss_pred cEEEcCCCEEEEEEEeCCCCCccCcceeCCcCCCC--C-CccceEeCCCCEEEEEEECCCCeEEEEEcCCCCchhhHHh-
Confidence 46789999999988753 3655432111000 0 011112333433 45666 799999999764 555
Q ss_pred CCcEEEEEeC
Q 048131 115 HGMKLEINVE 124 (124)
Q Consensus 115 ~GmKl~I~V~ 124 (124)
.||.-.+.|+
T Consensus 148 ~Gl~G~~iV~ 157 (340)
T 2bw4_A 148 SGMNGAIMVL 157 (340)
T ss_dssp TTCEEEEEEE
T ss_pred CcCEEEEEEc
Confidence 7888877663
No 56
>3iuw_A Activating signal cointegrator; NP_814290.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 1.58A {Enterococcus faecalis V583}
Probab=55.96 E-value=5.3 Score=25.78 Aligned_cols=16 Identities=38% Similarity=0.710 Sum_probs=12.2
Q ss_pred CeeeeCCEEEEE-eCCC
Q 048131 49 KTFKCGDILEFN-YDPQ 64 (124)
Q Consensus 49 ~~f~vGD~L~F~-y~~~ 64 (124)
+.|++||.|+|. |+++
T Consensus 36 r~~~vGD~l~l~E~~~g 52 (83)
T 3iuw_A 36 RNFQVGDILILEEYMNG 52 (83)
T ss_dssp SCCCTTCEEEEEEEETT
T ss_pred cCCCCCCEEEEEEccCC
Confidence 459999999995 6433
No 57
>2k75_A Uncharacterized protein TA0387; closed beta barrel, OB fold, structural genomics, PSI-2, protein structure initiative; NMR {Thermoplasma acidophilum}
Probab=52.15 E-value=6.2 Score=25.91 Aligned_cols=29 Identities=10% Similarity=0.256 Sum_probs=24.6
Q ss_pred EEEecCCCCCCccccCCCCCCeeeeCCEEEEE
Q 048131 29 TFKVGDDGGWVFGVQNWPEGKTFKCGDILEFN 60 (124)
Q Consensus 29 ~~~VG~~~gW~~~~~~Wa~~~~f~vGD~L~F~ 60 (124)
+.++||+.| .+..+.|-.. |+.||.+.++
T Consensus 41 ~~~l~DeTG-~I~~tlW~~~--l~~Gdvv~i~ 69 (106)
T 2k75_A 41 QGYIEDDTA-RIRISSFGKQ--LQDSDVVRID 69 (106)
T ss_dssp EEEEECSSC-EEEEEEESSC--CCTTEEEEEE
T ss_pred EEEEEcCCC-eEEEEEEcCc--cCCCCEEEEE
Confidence 567999888 6777888776 9999999998
No 58
>1yel_A AT1G16640; CESG, protein structure initiative, structural genomics, center for eukaryotic structural genomics, unknown function; NMR {Arabidopsis thaliana} SCOP: b.142.1.2
Probab=51.73 E-value=4.6 Score=26.19 Aligned_cols=19 Identities=26% Similarity=0.520 Sum_probs=15.3
Q ss_pred CCCCeeeeCCEEEEEeCCC
Q 048131 46 PEGKTFKCGDILEFNYDPQ 64 (124)
Q Consensus 46 a~~~~f~vGD~L~F~y~~~ 64 (124)
+..+.++.||.|+|+|...
T Consensus 73 v~~~~L~~GD~lvF~~~~~ 91 (104)
T 1yel_A 73 VKDNNLEDGKYLQFIYDRD 91 (104)
T ss_dssp HHHHTCCTTCEEEEEECSS
T ss_pred HHHcCCCCCCEEEEEEcCC
Confidence 3456789999999999854
No 59
>4i1k_A B3 domain-containing transcription factor VRN1; B3 domain beta-barrel, DNA binding protein; 1.60A {Arabidopsis thaliana}
Probab=46.16 E-value=15 Score=25.47 Aligned_cols=26 Identities=23% Similarity=0.248 Sum_probs=18.5
Q ss_pred CCCCeeeeCCEEEEEeCCCCCeEEEE
Q 048131 46 PEGKTFKCGDILEFNYDPQRHNVIIV 71 (124)
Q Consensus 46 a~~~~f~vGD~L~F~y~~~~h~V~~V 71 (124)
+..+.+++||.++|.+.....-++.|
T Consensus 112 v~dn~L~~GD~cvFeli~~~~~~f~V 137 (146)
T 4i1k_A 112 TLENNLGEGDVCVFELLRTRDFVLKV 137 (146)
T ss_dssp HHHTTCCTTCEEEEEECSSSSCEEEE
T ss_pred HHHcCCCCCCEEEEEEecCCceEEEE
Confidence 44577899999999998643234544
No 60
>2l8d_A Lamin-B receptor; DNA binding protein; NMR {Gallus gallus}
Probab=45.84 E-value=19 Score=22.22 Aligned_cols=45 Identities=20% Similarity=0.335 Sum_probs=28.8
Q ss_pred CCeeeeCCEEEEEeCCCCCeEEEECcCCCCCCCCCCCC--cccccCCcEEEe
Q 048131 48 GKTFKCGDILEFNYDPQRHNVIIVDQEGHDSCKPASDA--KKFQTGKDQIVL 97 (124)
Q Consensus 48 ~~~f~vGD~L~F~y~~~~h~V~~V~~~~y~~C~~~~~~--~~~~~G~~~v~l 97 (124)
..+|++||++.=+| +|.+.-+++--.+++ ..+|+ -.+.+| ++.+|
T Consensus 7 ~~~~~vgd~VmaRW-~Gd~~yYparI~Si~---s~~~~Y~V~fKdg-T~e~L 53 (66)
T 2l8d_A 7 NRKYADGEVVMGRW-PGSVLYYEVQVTSYD---DASHLYTVKYKDG-TELAL 53 (66)
T ss_dssp SSSSCSSCEEEEEC-TTSSCEEEEEEEEEE---TTTTEEEEEETTS-CEEEE
T ss_pred ceEeecCCEEEEEc-CCCccceEEEEEEec---cCCceEEEEecCC-CEEee
Confidence 46899999999999 677777666333444 34454 345663 44444
No 61
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=44.89 E-value=13 Score=28.75 Aligned_cols=86 Identities=15% Similarity=0.043 Sum_probs=0.0
Q ss_pred CCccccCCCCCCeeeeCCEEEEEeCCC--------CCeEEEECc--CCCCCCCCCCCCcccccCCcEEEeC-CcceEEEe
Q 048131 38 WVFGVQNWPEGKTFKCGDILEFNYDPQ--------RHNVIIVDQ--EGHDSCKPASDAKKFQTGKDQIVLN-HGKNFFIC 106 (124)
Q Consensus 38 W~~~~~~Wa~~~~f~vGD~L~F~y~~~--------~h~V~~V~~--~~y~~C~~~~~~~~~~~G~~~v~l~-~G~~yfic 106 (124)
|+++-+--....+++.||+++++..+. -|.+.+... .|--.=....++..-.+=.-.|+++ +|++||-|
T Consensus 26 ~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~~I~PG~~~~y~f~~~~~Gt~wyH~ 105 (339)
T 2zwn_A 26 FGFNGQVPGPLIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQPIEAGDSYTYKFKADRIGTLWYHC 105 (339)
T ss_dssp EEETTBSSCCEEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECCSCEEEEEEC
T ss_pred EEECCccCCCeEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccCccCCCCeEEEEEECCCCEEEEEEe
Q ss_pred CCCC---CccCCCcEEEEEeC
Q 048131 107 GVPT---HCSDHGMKLEINVE 124 (124)
Q Consensus 107 ~~~~---hC~~~GmKl~I~V~ 124 (124)
.... -.. .||.-.+.|+
T Consensus 106 H~~~~~q~~~-~Gl~G~liV~ 125 (339)
T 2zwn_A 106 HVNVNEHVGV-RGMWGPLIVD 125 (339)
T ss_dssp CSSHHHHTTT-SCCEEEEEEE
T ss_pred cCCchhhhhc-CCceEeEEec
No 62
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=44.05 E-value=50 Score=25.90 Aligned_cols=84 Identities=18% Similarity=0.171 Sum_probs=49.3
Q ss_pred EEEEecCCCCCCccccCC----CCCCeeeeCCEEEEEeCCC--CCeEEEECcCCCCCCCCCCCCc-ccccCCc---EEEe
Q 048131 28 TTFKVGDDGGWVFGVQNW----PEGKTFKCGDILEFNYDPQ--RHNVIIVDQEGHDSCKPASDAK-KFQTGKD---QIVL 97 (124)
Q Consensus 28 ~~~~VG~~~gW~~~~~~W----a~~~~f~vGD~L~F~y~~~--~h~V~~V~~~~y~~C~~~~~~~-~~~~G~~---~v~l 97 (124)
+..++|-.=.|.+.|.+- .....+-+|..+.|.-++. .|+...- ++ .++ -.-.|.. .++.
T Consensus 128 tIkVig~QW~W~f~Ypd~~i~t~n~l~lP~g~~V~~~lTS~DViHsf~IP---~l-------g~k~DaiPGr~n~~~~~~ 197 (315)
T 1fft_B 128 TIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMNSFFIP---RL-------GSQIYAMAGMQTRLHLIA 197 (315)
T ss_dssp EEEEECCTTSCEEECTTTCCEEESBCCCCSSSEEEEEECBSSSCEEEEEG---GG-------TEEEEECBTSCEEEEEEC
T ss_pred eEEEeeeeccEEEecCCCcccccceEEEeCCCEEEEEEEeCCccceeeec---cc-------CcEEeecCCcceeeEEec
Confidence 345566555567666432 1234678899999988854 3555541 11 011 1112332 4666
Q ss_pred C-CcceEEEeCCCCCccC--CCcEEEEEe
Q 048131 98 N-HGKNFFICGVPTHCSD--HGMKLEINV 123 (124)
Q Consensus 98 ~-~G~~yfic~~~~hC~~--~GmKl~I~V 123 (124)
+ ||.||..|+. -|-. +.|++.|.|
T Consensus 198 ~~~G~y~g~CsE--~CG~~Hs~M~~~v~v 224 (315)
T 1fft_B 198 NEPGTYDGISAS--YSGPGFSGMKFKAIA 224 (315)
T ss_dssp CSCBCCEEBCCS--CCSTTTTTCCEECCB
T ss_pred CCCeEEEEeccc--cchhhHHhccceEEE
Confidence 7 8999999986 5652 348888766
No 63
>2z0t_A Putative uncharacterized protein PH0355; alpha/beta protein, RNA binding protein, structural genomics, NPPSFA; 1.80A {Pyrococcus horikoshii} PDB: 1s04_A
Probab=42.54 E-value=7 Score=26.32 Aligned_cols=11 Identities=45% Similarity=0.794 Sum_probs=10.1
Q ss_pred CeeeeCCEEEE
Q 048131 49 KTFKCGDILEF 59 (124)
Q Consensus 49 ~~f~vGD~L~F 59 (124)
+.+++||.|+|
T Consensus 32 ~~ikvGD~I~f 42 (109)
T 2z0t_A 32 RQIKPGDIIIF 42 (109)
T ss_dssp GGCCTTCEEEE
T ss_pred hcCCCCCEEEE
Confidence 57899999999
No 64
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=42.03 E-value=11 Score=29.07 Aligned_cols=30 Identities=13% Similarity=0.098 Sum_probs=25.1
Q ss_pred EEEeC-CcceEEEeCCCCCc-cCCCcEEEEEeC
Q 048131 94 QIVLN-HGKNFFICGVPTHC-SDHGMKLEINVE 124 (124)
Q Consensus 94 ~v~l~-~G~~yfic~~~~hC-~~~GmKl~I~V~ 124 (124)
.++.+ ||.++|.|-...|. + .||.-.+.|+
T Consensus 286 ~v~a~~pG~y~~~ch~~~h~~~-~Gm~~~~~v~ 317 (333)
T 1mzy_A 286 LYKFLQPGVYAYVNHNLIEAVH-KGATAHVLVE 317 (333)
T ss_dssp EEECCSCEEEEEEESSHHHHHT-TCCEEEEEEE
T ss_pred EEEcCCCEEEEEecChhhhHhh-CCCEEEEEEc
Confidence 45556 89999999998999 8 9999888773
No 65
>1xne_A Hypothetical protein PF0469; GFT structural genomics, protein structure initiative, NESG, PFR14, alpha and beta protein; NMR {Pyrococcus furiosus} SCOP: b.122.1.6
Probab=41.77 E-value=6.9 Score=26.48 Aligned_cols=12 Identities=50% Similarity=0.703 Sum_probs=10.4
Q ss_pred CeeeeCCEEEEE
Q 048131 49 KTFKCGDILEFN 60 (124)
Q Consensus 49 ~~f~vGD~L~F~ 60 (124)
+.+++||+|+|+
T Consensus 33 ~~i~vGD~I~f~ 44 (113)
T 1xne_A 33 KDIKRGDKIIFN 44 (113)
T ss_dssp TTCCTTCEEEET
T ss_pred hccCCCCEEEEc
Confidence 578999999994
No 66
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=40.46 E-value=22 Score=29.63 Aligned_cols=74 Identities=12% Similarity=0.160 Sum_probs=43.3
Q ss_pred CCeeeeCCEEEEEeCCCC----CeEEE----EC-cCCCCCCCCCCCC-ccccc-CCc---EEEeC-CcceEEEeCCCCCc
Q 048131 48 GKTFKCGDILEFNYDPQR----HNVII----VD-QEGHDSCKPASDA-KKFQT-GKD---QIVLN-HGKNFFICGVPTHC 112 (124)
Q Consensus 48 ~~~f~vGD~L~F~y~~~~----h~V~~----V~-~~~y~~C~~~~~~-~~~~~-G~~---~v~l~-~G~~yfic~~~~hC 112 (124)
..+++.||+|+.++.+.. +++.- +. ....|. .+... ..... |.+ .|+++ +|++||=|-...|=
T Consensus 68 ~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG--~~~~tq~~I~P~G~~~~Y~f~~~q~GT~wYH~H~~~q~ 145 (559)
T 2q9o_A 68 NIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDG--ANGVTECPIPPKGGQRTYRWRARQYGTSWYHSHFSAQY 145 (559)
T ss_dssp CEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSC--CBTTTBCCBCTTTEEEEEEEECCSCEEEEEEECSTTGG
T ss_pred cEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCC--CCccccCccCCCCCeEEEEEECCCCEEEEEEEcccchh
Confidence 467889999999886432 33311 11 011111 00000 11223 433 56666 89999999988777
Q ss_pred cCCCcEEEEEeC
Q 048131 113 SDHGMKLEINVE 124 (124)
Q Consensus 113 ~~~GmKl~I~V~ 124 (124)
. .||--.+.|+
T Consensus 146 ~-~Gl~G~liV~ 156 (559)
T 2q9o_A 146 G-NGVVGTIQIN 156 (559)
T ss_dssp G-GTCEEEEEEE
T ss_pred c-CCceEEEEec
Confidence 7 8998888774
No 67
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=40.34 E-value=8.6 Score=29.15 Aligned_cols=30 Identities=17% Similarity=0.148 Sum_probs=25.4
Q ss_pred EEEeC-CcceEEEeCCCCCccCCCcEEEEEeC
Q 048131 94 QIVLN-HGKNFFICGVPTHCSDHGMKLEINVE 124 (124)
Q Consensus 94 ~v~l~-~G~~yfic~~~~hC~~~GmKl~I~V~ 124 (124)
.++.+ ||.+.|-|-...|=+ .||.-.+.|+
T Consensus 257 ~~~~~~pG~~~~hCH~~~H~~-~GM~~~~~V~ 287 (288)
T 3gdc_A 257 ELRFPYPGKFMFHAHKTEFAE-LGWMGFFEVS 287 (288)
T ss_dssp EECCCSCEEEEEECSSHHHHT-TTCEEEEEEE
T ss_pred EEECCCCEEEEEEecChHHHh-cCCCEEEEEe
Confidence 34445 899999999999999 9999999874
No 68
>4he6_A Peptidase family U32; ultra-tight crystal packing, unknown function; 1.10A {Geobacillus thermoleovorans} PDB: 4he5_A
Probab=40.12 E-value=25 Score=21.90 Aligned_cols=24 Identities=21% Similarity=0.275 Sum_probs=16.5
Q ss_pred CCeeeeCCEEEEEeCCCCCeEEEE
Q 048131 48 GKTFKCGDILEFNYDPQRHNVIIV 71 (124)
Q Consensus 48 ~~~f~vGD~L~F~y~~~~h~V~~V 71 (124)
.++|.+||.|++--+.+..--+.|
T Consensus 27 rN~f~~GD~iEi~~P~g~~~~~~v 50 (89)
T 4he6_A 27 RNHFRPGDEVEFFGPEIENFTQVI 50 (89)
T ss_dssp SSCBCTTCEEEEESTTSCCEEEEC
T ss_pred cCCcCCCCEEEEEcCCCCcEEEEe
Confidence 578999999998766443333444
No 69
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=40.07 E-value=22 Score=26.44 Aligned_cols=84 Identities=21% Similarity=0.277 Sum_probs=45.9
Q ss_pred EEEEecCCCCCCccccCC----CCCCeeeeCCEEEEEeCCC--CCeEEEECcCCCCCCCCCCCCcc-cccCCc---EEEe
Q 048131 28 TTFKVGDDGGWVFGVQNW----PEGKTFKCGDILEFNYDPQ--RHNVIIVDQEGHDSCKPASDAKK-FQTGKD---QIVL 97 (124)
Q Consensus 28 ~~~~VG~~~gW~~~~~~W----a~~~~f~vGD~L~F~y~~~--~h~V~~V~~~~y~~C~~~~~~~~-~~~G~~---~v~l 97 (124)
+..++|-.=-|.+.|.+- .....+.+|+.+.|.-++. .|+...- ++ .++. .-.|.. .+..
T Consensus 18 tIkVig~QW~W~f~Ypd~~i~~~n~l~lP~g~~V~~~lTS~DViHSF~IP---~l-------gvK~daiPGr~n~l~~~~ 87 (205)
T 1cyx_A 18 TIEVVSMDWKWFFIYPEQGIATVNEIAFPANTPVYFKVTSNSVMHSFFIP---RL-------GSQIYAMAGMQTRLHLIA 87 (205)
T ss_dssp EEEEEEETTEEEEEETTTTEEEESEEEEETTSCEEEEEEESSSCEEEEEG---GG-------TEEEEECTTCCEEEEECC
T ss_pred EEEEEEEEeEEEEEeCCCCccccceEEEeCCCEEEEEEecCCceeeEEec---cc-------CcEEEecCCceEEEEEEe
Confidence 344566444466655321 1123566788888877643 3555441 11 0111 112322 4445
Q ss_pred C-CcceEEEeCCCCCccC--CCcEEEEEe
Q 048131 98 N-HGKNFFICGVPTHCSD--HGMKLEINV 123 (124)
Q Consensus 98 ~-~G~~yfic~~~~hC~~--~GmKl~I~V 123 (124)
+ ||.||..|+. -|-. +.|++.|.|
T Consensus 88 ~~pG~y~g~CsE--~CG~~Hs~M~~~v~v 114 (205)
T 1cyx_A 88 NEPGTYDGICAE--ICGPGHSGMKFKAIA 114 (205)
T ss_dssp SSSEEEEEEECS--CCSTTSTTCCEEEEE
T ss_pred CCCeEEEEEccc--ccccchhhceEEEEE
Confidence 6 8999999996 5651 359888876
No 70
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=39.39 E-value=4 Score=31.32 Aligned_cols=75 Identities=12% Similarity=0.206 Sum_probs=32.0
Q ss_pred CCeeeeCCEEEEEeCCCC--CeEEEE--CcCCCCCCCC-CCCCcccccCC-c--EEEeC-CcceEEEeCCCCCccCCCcE
Q 048131 48 GKTFKCGDILEFNYDPQR--HNVIIV--DQEGHDSCKP-ASDAKKFQTGK-D--QIVLN-HGKNFFICGVPTHCSDHGMK 118 (124)
Q Consensus 48 ~~~f~vGD~L~F~y~~~~--h~V~~V--~~~~y~~C~~-~~~~~~~~~G~-~--~v~l~-~G~~yfic~~~~hC~~~GmK 118 (124)
..+++.||++.|+.-+.. +....+ ....++. +. .........|. . .++.+ ||.++|.|-...|-. .||.
T Consensus 216 ~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~-dG~~~dtv~l~pger~~v~~~~~~pG~~~~hch~~~H~~-~GM~ 293 (306)
T 1sdd_A 216 DITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ-NHHKISAITLVSATSTTANMTVSPEGRWTIASLIPRHFQ-AGMQ 293 (306)
T ss_dssp CCCCCCC------BBCCCSSSCEECCBCSSTTCEE-TTEECSCCCEETTCCBC--------CCCCCBCCSTTTGG-GTCB
T ss_pred ceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee-CCEEcceEEECCCcEEEEEEEcCCCeEEEEEeCChHHHh-cCCe
Confidence 457788999988876421 122212 1112211 00 00011112222 2 45556 899999999999999 9999
Q ss_pred EEEEeC
Q 048131 119 LEINVE 124 (124)
Q Consensus 119 l~I~V~ 124 (124)
..+.|+
T Consensus 294 ~~~~V~ 299 (306)
T 1sdd_A 294 AYIDIK 299 (306)
T ss_dssp CCC---
T ss_pred EEEEEe
Confidence 877764
No 71
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=38.87 E-value=12 Score=28.66 Aligned_cols=30 Identities=17% Similarity=0.143 Sum_probs=25.0
Q ss_pred EEEeC-CcceEEEeCCCCCc-cCCCcEEEEEeC
Q 048131 94 QIVLN-HGKNFFICGVPTHC-SDHGMKLEINVE 124 (124)
Q Consensus 94 ~v~l~-~G~~yfic~~~~hC-~~~GmKl~I~V~ 124 (124)
.++.+ ||.|+|.|....|+ + .||.-.+.|+
T Consensus 286 lv~~~~pG~y~~~~h~~~~~~~-~G~~~~~~V~ 317 (336)
T 1oe1_A 286 LYTFKQPGVYAYLNHNLIEAFE-LGAAGHIKVE 317 (336)
T ss_dssp EEECCSCEEEEEEESSHHHHHT-TSCEEEEEEE
T ss_pred EEEcCCCceEEEEechhhcccc-CCCeEEEEEC
Confidence 45556 89999999988888 7 9999888874
No 72
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=36.61 E-value=36 Score=28.11 Aligned_cols=74 Identities=15% Similarity=0.151 Sum_probs=43.3
Q ss_pred CCeeeeCCEEEEEeCCCC----CeE-----EEECcCCCCCCCCCCC-CcccccCCc---EEEeC-CcceEEEeCCCCCcc
Q 048131 48 GKTFKCGDILEFNYDPQR----HNV-----IIVDQEGHDSCKPASD-AKKFQTGKD---QIVLN-HGKNFFICGVPTHCS 113 (124)
Q Consensus 48 ~~~f~vGD~L~F~y~~~~----h~V-----~~V~~~~y~~C~~~~~-~~~~~~G~~---~v~l~-~G~~yfic~~~~hC~ 113 (124)
..+++.||+|+.+..+.. +++ .+-.....|. .+.. ......|.+ .|+++ +|++||=|-...+=.
T Consensus 35 ~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DG--v~~vtq~~I~PG~s~tY~f~~~~~GT~wYHsH~~~q~~ 112 (552)
T 1aoz_A 35 TIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADG--TASISQCAINPGETFFYNFTVDNPGTFFYHGHLGMQRS 112 (552)
T ss_dssp CEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSC--CBTTTBCCBCTTCEEEEEEECCSCEEEEEEECSTTTGG
T ss_pred cEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCC--CcccccCCcCCCCeEEEEEECCCCEEEEEEECchhHHh
Confidence 468899999999887432 222 1111000111 0000 011223433 56666 799999999887777
Q ss_pred CCCcEEEEEeC
Q 048131 114 DHGMKLEINVE 124 (124)
Q Consensus 114 ~~GmKl~I~V~ 124 (124)
.||--.+.|+
T Consensus 113 -~Gl~G~liV~ 122 (552)
T 1aoz_A 113 -AGLYGSLIVD 122 (552)
T ss_dssp -GTCEEEEEEE
T ss_pred -ccCeeeEEEe
Confidence 8998888774
No 73
>2l55_A SILB,silver efflux protein, MFP component of the components proton antiporter metal...; APO form, AG(I)-binding site; NMR {Cupriavidus metallidurans}
Probab=36.42 E-value=23 Score=22.26 Aligned_cols=21 Identities=19% Similarity=0.263 Sum_probs=16.4
Q ss_pred cCCCCCCeeeeCCEEEEEeCC
Q 048131 43 QNWPEGKTFKCGDILEFNYDP 63 (124)
Q Consensus 43 ~~Wa~~~~f~vGD~L~F~y~~ 63 (124)
.+-+.-..+++||.|.|.+..
T Consensus 40 ~~~~~l~~lk~Gd~V~F~~~~ 60 (82)
T 2l55_A 40 PPAGLPQGLKAGDRVAFSFRL 60 (82)
T ss_dssp CTTCCCSSCSTTCEEEEEEEE
T ss_pred CChhHhhcCCCCCEEEEEEEE
Confidence 344445789999999999974
No 74
>2kbn_A Conserved protein; nucleic acid binding protein, beta barrel, structural genomics, PSI-2, protein structure initiative; NMR {Methanosarcina mazei} PDB: 2ken_A
Probab=35.79 E-value=25 Score=22.96 Aligned_cols=33 Identities=18% Similarity=0.346 Sum_probs=25.5
Q ss_pred eEEEEecCCCCCCccccCCC--CCCeeeeCCEEEEE
Q 048131 27 ATTFKVGDDGGWVFGVQNWP--EGKTFKCGDILEFN 60 (124)
Q Consensus 27 a~~~~VG~~~gW~~~~~~Wa--~~~~f~vGD~L~F~ 60 (124)
...-++||+.| ++..+.|. ....++.||++.++
T Consensus 36 ~~~~~l~DeTG-~I~~t~W~~~~~~~~~~G~~V~i~ 70 (109)
T 2kbn_A 36 SQVGLLGDETG-IIKFTIWKNAELPLLEQGESYLLR 70 (109)
T ss_dssp EEEEEEECTTC-CEEEEEEGGGCCCCCCTTCEEEEE
T ss_pred EEEEEEECCCC-eEEEEEECcccccccCCCCEEEEE
Confidence 34568999988 66677886 33589999999988
No 75
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=34.78 E-value=55 Score=26.09 Aligned_cols=70 Identities=11% Similarity=0.169 Sum_probs=40.0
Q ss_pred CCeeeeCCEEEEEeCCC---CCeEEE----ECcCCCCCCCCCCCCcccccCCc---EEEe--C-CcceEEEeCCCC----
Q 048131 48 GKTFKCGDILEFNYDPQ---RHNVII----VDQEGHDSCKPASDAKKFQTGKD---QIVL--N-HGKNFFICGVPT---- 110 (124)
Q Consensus 48 ~~~f~vGD~L~F~y~~~---~h~V~~----V~~~~y~~C~~~~~~~~~~~G~~---~v~l--~-~G~~yfic~~~~---- 110 (124)
..+++.||+|+.++.+. .+++.- ++. ..| ++......|.+ .|++ + +|++||=|-..+
T Consensus 48 ~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~-~~D-----G~~~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~ 121 (439)
T 2xu9_A 48 TLRVRPRDTVRLTLENRLPEPTNLHWHGLPISP-KVD-----DPFLEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAP 121 (439)
T ss_dssp EEEECTTCEEEEEEEECSSSCBCCEEETCCCCT-TTS-----CTTCCBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHH
T ss_pred EEEEeCCCEEEEEEEECCCCCcceEeCCCCCCc-ccc-----CCcccCCCCCeEEEEEecCCCCCcceEeccCCCCchHH
Confidence 36788999999888643 222211 111 111 11112334443 5665 2 799999998643
Q ss_pred CccCCCcEEEEEeC
Q 048131 111 HCSDHGMKLEINVE 124 (124)
Q Consensus 111 hC~~~GmKl~I~V~ 124 (124)
|=. .||.-.+.|+
T Consensus 122 q~~-~Gl~G~liV~ 134 (439)
T 2xu9_A 122 QLF-AGLLGALVVE 134 (439)
T ss_dssp HHH-TTCCEEEEEC
T ss_pred HHH-hhCeEEEEEc
Confidence 445 6888877764
No 76
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=33.22 E-value=29 Score=27.11 Aligned_cols=28 Identities=18% Similarity=0.300 Sum_probs=20.9
Q ss_pred EEEeC-CcceEEEeCCCCCccC--CCcEEEEEe
Q 048131 94 QIVLN-HGKNFFICGVPTHCSD--HGMKLEINV 123 (124)
Q Consensus 94 ~v~l~-~G~~yfic~~~~hC~~--~GmKl~I~V 123 (124)
.++.+ ||.||..|++ -|-. +.|++.|.|
T Consensus 232 ~~~~~~~G~y~g~CsE--~CG~~Hs~M~~~v~v 262 (298)
T 3hb3_B 232 WFSVDQEGVYFGQCSE--LCGINHAYMPIVVKA 262 (298)
T ss_dssp EEECSSSEEEEECCCS--CCSTTTTSCCEEEEE
T ss_pred EEEeCCCEEEEEEccc--ccCcCccCCeeEEEE
Confidence 46667 8999999996 4551 459888876
No 77
>2qcp_X Cation efflux system protein CUSF; silver-binding, copper-binding, beta barrel, OB-fold, metall metal resistance, metal-binding; 1.00A {Escherichia coli str} PDB: 1zeq_X 3e6z_X
Probab=32.77 E-value=20 Score=22.41 Aligned_cols=17 Identities=29% Similarity=0.495 Sum_probs=14.1
Q ss_pred CCCeeeeCCEEEEEeCC
Q 048131 47 EGKTFKCGDILEFNYDP 63 (124)
Q Consensus 47 ~~~~f~vGD~L~F~y~~ 63 (124)
.-..+++||.+.|.+..
T Consensus 50 ~l~~lk~Gd~V~F~~~~ 66 (80)
T 2qcp_X 50 KMSEIKTGDKVAFNFVQ 66 (80)
T ss_dssp EECCCCTTCEEEEEEEE
T ss_pred hhhcCCCCCEEEEEEEE
Confidence 34679999999999974
No 78
>2hzs_I RNA polymerase II mediator complex subunit 8; beta barrel, channel, helix, transcription; 2.70A {Saccharomyces cerevisiae}
Probab=32.63 E-value=0.38 Score=24.39 Aligned_cols=19 Identities=32% Similarity=0.807 Sum_probs=13.6
Q ss_pred CCeeeeCCEEEEEeCCCCC
Q 048131 48 GKTFKCGDILEFNYDPQRH 66 (124)
Q Consensus 48 ~~~f~vGD~L~F~y~~~~h 66 (124)
.+.|.|.|.|.|.|+...|
T Consensus 4 skpfnvddvlkftftgekh 22 (27)
T 2hzs_I 4 SKPFNVDDVLKFTFTGEKH 22 (27)
T ss_dssp --CCCHHHHHHHHHHCCCC
T ss_pred CCCcChhheEEEEeccccc
Confidence 4788999999998886443
No 79
>2dig_A Lamin-B receptor; tudor domain, integral nuclear envelope inner membrane protein, nuclear protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=32.57 E-value=42 Score=20.73 Aligned_cols=45 Identities=20% Similarity=0.353 Sum_probs=28.6
Q ss_pred CCeeeeCCEEEEEeCCCCCeEEEECcCCCCCCCCCCCC--cccccCCcEEEe
Q 048131 48 GKTFKCGDILEFNYDPQRHNVIIVDQEGHDSCKPASDA--KKFQTGKDQIVL 97 (124)
Q Consensus 48 ~~~f~vGD~L~F~y~~~~h~V~~V~~~~y~~C~~~~~~--~~~~~G~~~v~l 97 (124)
..+|++||++.=+|. |.+.-+++--.+++ ..+|+ -.+.+| ++.+|
T Consensus 10 ~~~f~vgd~VmaRW~-Gd~~yYparItSit---s~~~~Y~VkfKdg-T~e~L 56 (68)
T 2dig_A 10 SRKFADGEVVRGRWP-GSSLYYEVEILSHD---STSQLYTVKYKDG-TELEL 56 (68)
T ss_dssp CCSSCSSCEEEEECT-TTCCEEEEEEEEEE---TTTTEEEEECTTS-CEEEE
T ss_pred ceEeecCCEEEEEcc-CCccceEEEEEEec---cCCceEEEEecCC-CEEEe
Confidence 467999999999999 66666665333443 34454 356663 44444
No 80
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=31.85 E-value=32 Score=26.17 Aligned_cols=27 Identities=22% Similarity=0.367 Sum_probs=20.6
Q ss_pred EEEeC-CcceEEEeCCCCCccCCC---cEEEEEe
Q 048131 94 QIVLN-HGKNFFICGVPTHCSDHG---MKLEINV 123 (124)
Q Consensus 94 ~v~l~-~G~~yfic~~~~hC~~~G---mKl~I~V 123 (124)
.++.+ ||.||..|+. -|- .| |++.|.|
T Consensus 214 ~~~~~~~G~y~g~Cse--~CG-~~H~~M~~~v~v 244 (262)
T 2gsm_B 214 WFRAEREGIFFGQCSE--LCG-ISHAYMPITVKV 244 (262)
T ss_dssp EEECCSCEEEEECCCS--CCS-TTGGGCCEEEEE
T ss_pred EEecCCcEEEEEEChH--hcc-cCcccCeEEEEE
Confidence 56667 8999999996 566 43 8888776
No 81
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=31.39 E-value=45 Score=27.41 Aligned_cols=30 Identities=13% Similarity=0.265 Sum_probs=24.3
Q ss_pred EEEe-C-CcceEEEeCCCCCccCCCcEEEEEeC
Q 048131 94 QIVL-N-HGKNFFICGVPTHCSDHGMKLEINVE 124 (124)
Q Consensus 94 ~v~l-~-~G~~yfic~~~~hC~~~GmKl~I~V~ 124 (124)
.|++ + +|++||=|-...+=. .||.-.+.|+
T Consensus 97 ~f~~~~~~GT~wYHsH~~~q~~-~GL~G~lIV~ 128 (495)
T 3t6v_A 97 NFNVPGMAGTYWYHSHLTTQYC-DGLRGPFVVY 128 (495)
T ss_dssp EEECTTCCEEEEEEECSTTGGG-GTCEEEEEEE
T ss_pred EEEeCCCCceeeeeccchhHHh-cCceEEEEEc
Confidence 6777 4 799999999887777 8998888773
No 82
>2vb2_X Copper protein, cation efflux system protein CUSF; cation PI, metal-binding, metal transport, copper tolerance, transport; 1.70A {Escherichia coli} PDB: 2vb3_X
Probab=31.15 E-value=22 Score=22.68 Aligned_cols=21 Identities=24% Similarity=0.346 Sum_probs=16.2
Q ss_pred cCCCCCCeeeeCCEEEEEeCC
Q 048131 43 QNWPEGKTFKCGDILEFNYDP 63 (124)
Q Consensus 43 ~~Wa~~~~f~vGD~L~F~y~~ 63 (124)
.+.+.-..+++||.|.|.+..
T Consensus 54 ~~~~~l~~lk~Gd~V~F~~~~ 74 (88)
T 2vb2_X 54 TPQTKMSEIKTGDKVAFNFVQ 74 (88)
T ss_dssp CTTCEECCCCTTCEEEEEEEE
T ss_pred CChhhhhcCCCCCEEEEEEEE
Confidence 344445679999999999974
No 83
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=30.85 E-value=48 Score=27.25 Aligned_cols=30 Identities=17% Similarity=0.338 Sum_probs=24.3
Q ss_pred EEEe-C-CcceEEEeCCCCCccCCCcEEEEEeC
Q 048131 94 QIVL-N-HGKNFFICGVPTHCSDHGMKLEINVE 124 (124)
Q Consensus 94 ~v~l-~-~G~~yfic~~~~hC~~~GmKl~I~V~ 124 (124)
.|++ + +|++||=|-...|=. .||--.+.|+
T Consensus 117 ~f~~~~~~GT~wYH~H~~~q~~-~Gl~G~liV~ 148 (521)
T 1v10_A 117 DFVVPGQAGTYWYHSHLSTQYC-DGLRGAFVVY 148 (521)
T ss_dssp EEECTTCCEEEEEEECSTTGGG-GTCEEEEEEE
T ss_pred EEecCCCCccEEEEeccCCchh-cCceEEEEEc
Confidence 5775 3 799999999887777 8998888774
No 84
>4dok_A Similarity to chalcone-flavonone isomerase; chalcone-isomerase like protein, chalcone-isomerase like FOL isomerase; 1.70A {Arabidopsis thaliana}
Probab=30.37 E-value=40 Score=24.83 Aligned_cols=21 Identities=14% Similarity=0.450 Sum_probs=17.0
Q ss_pred CCeeeeCCEEEEEeCCCCCeE
Q 048131 48 GKTFKCGDILEFNYDPQRHNV 68 (124)
Q Consensus 48 ~~~f~vGD~L~F~y~~~~h~V 68 (124)
+++|..||+|.|.|.++..++
T Consensus 135 ~~~~~~G~~I~~~~~p~~G~L 155 (208)
T 4dok_A 135 SKYFKANSVITYHFSAKDGIC 155 (208)
T ss_dssp TCEECTTCEEEEEECSSSCCE
T ss_pred cCCCCCCCEEEEEEeCCCCeE
Confidence 358999999999999865543
No 85
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=30.26 E-value=54 Score=27.10 Aligned_cols=74 Identities=14% Similarity=0.163 Sum_probs=43.4
Q ss_pred CCeeeeCCEEEEEeCCCC---------CeEEEECcCCCCC-CCCCCCCcccccCCc---EEEeC--CcceEEEeCCCCCc
Q 048131 48 GKTFKCGDILEFNYDPQR---------HNVIIVDQEGHDS-CKPASDAKKFQTGKD---QIVLN--HGKNFFICGVPTHC 112 (124)
Q Consensus 48 ~~~f~vGD~L~F~y~~~~---------h~V~~V~~~~y~~-C~~~~~~~~~~~G~~---~v~l~--~G~~yfic~~~~hC 112 (124)
..+++.||+|+.++.+.. |.+.+-.....|. -..+. .....|.+ .|+++ +|++||=|-...|=
T Consensus 35 ~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq--~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~ 112 (534)
T 1zpu_A 35 DITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQ--CPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQY 112 (534)
T ss_dssp CEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTB--CCBCTTCEEEEEEECSSCCEEEEEECCSSSGG
T ss_pred cEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCcccc--CCcCCCCeEEEEEEeCccceeEEEEEcCcccc
Confidence 368899999999987542 2222210001110 00000 11223433 56665 59999999988877
Q ss_pred cCCCcEEEEEeC
Q 048131 113 SDHGMKLEINVE 124 (124)
Q Consensus 113 ~~~GmKl~I~V~ 124 (124)
. .||.-.+.|+
T Consensus 113 ~-~Gl~G~liV~ 123 (534)
T 1zpu_A 113 E-DGMKGLFIIK 123 (534)
T ss_dssp G-GTCEEEEEEE
T ss_pred c-CcceeeEEeC
Confidence 7 8999888774
No 86
>1wjj_A Hypothetical protein F20O9.120; DNA-binding protein-related, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: b.40.4.3
Probab=30.16 E-value=19 Score=25.28 Aligned_cols=33 Identities=15% Similarity=0.227 Sum_probs=24.8
Q ss_pred EEEecCCCCCCccccCCCCC-CeeeeCCEEEEEeC
Q 048131 29 TFKVGDDGGWVFGVQNWPEG-KTFKCGDILEFNYD 62 (124)
Q Consensus 29 ~~~VG~~~gW~~~~~~Wa~~-~~f~vGD~L~F~y~ 62 (124)
+.+|||+.| .+..+.|... ..++.||++.+..-
T Consensus 65 ~~lVgDeTG-~I~ftlW~e~~~~l~~Gd~v~i~na 98 (145)
T 1wjj_A 65 ECLIGDETG-CILFTARNDQVDLMKPGATVILRNS 98 (145)
T ss_dssp EEEEECSSC-EEEEEECTTHHHHTCTTCEEEEEEE
T ss_pred EEEEEcCCc-EEEEEEecCCcCcCCCCCEEEEecc
Confidence 568999887 4556788764 35889999998763
No 87
>4doi_A Chalcone--flavonone isomerase 1; chalcone-flavanone isomerase; 1.55A {Arabidopsis thaliana}
Probab=30.09 E-value=47 Score=25.22 Aligned_cols=17 Identities=29% Similarity=0.516 Sum_probs=15.1
Q ss_pred CCeeeeCCEEEEEeCCC
Q 048131 48 GKTFKCGDILEFNYDPQ 64 (124)
Q Consensus 48 ~~~f~vGD~L~F~y~~~ 64 (124)
+++|+.||+|.|.|.++
T Consensus 152 ~~~l~kGs~I~~~~~p~ 168 (246)
T 4doi_A 152 EETFPPGSSILFALSPT 168 (246)
T ss_dssp TCEECTTCEEEEEECTT
T ss_pred cCcCCCCCEEEEEEeCC
Confidence 46899999999999975
No 88
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=29.92 E-value=49 Score=27.22 Aligned_cols=30 Identities=13% Similarity=0.279 Sum_probs=24.2
Q ss_pred EEEe-C-CcceEEEeCCCCCccCCCcEEEEEeC
Q 048131 94 QIVL-N-HGKNFFICGVPTHCSDHGMKLEINVE 124 (124)
Q Consensus 94 ~v~l-~-~G~~yfic~~~~hC~~~GmKl~I~V~ 124 (124)
.|++ + +|++||=|-...+=. .||.-.+.|+
T Consensus 96 ~f~~~~~~GT~wYHsH~~~q~~-~GL~G~lIV~ 127 (499)
T 3pxl_A 96 DFQVPDQAGTFWYHSHLSTQYC-DGLRGPFVVY 127 (499)
T ss_dssp EEECSSCCEEEEEEECSTTGGG-GTCEEEEEEE
T ss_pred EEEcCCCCceeeeeccchhHHh-ccceeEEEEc
Confidence 5777 4 799999999887777 8998888773
No 89
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=29.14 E-value=31 Score=25.69 Aligned_cols=27 Identities=15% Similarity=0.411 Sum_probs=20.1
Q ss_pred EEEeC-CcceEEEeCCCCCccCCC---cEEEEEe
Q 048131 94 QIVLN-HGKNFFICGVPTHCSDHG---MKLEINV 123 (124)
Q Consensus 94 ~v~l~-~G~~yfic~~~~hC~~~G---mKl~I~V 123 (124)
.++.+ ||.||..|+. -|- .| |++.|.|
T Consensus 183 ~~~~~~~G~y~g~Cse--~CG-~~Hs~M~~~v~v 213 (227)
T 1v54_B 183 TLMSSRPGLYYGQCSE--ICG-SNHSFMPIVLEL 213 (227)
T ss_dssp EECCSSCEEEEECCCS--CCS-TTGGGCCEEEEE
T ss_pred EEecCCcEEEEEEehh--hcc-cccccCeEEEEE
Confidence 45556 8999999986 666 44 8888776
No 90
>1z0n_A 5'-AMP-activated protein kinase, beta-1 subunit; beta sandwich, sugar binding protein; HET: BCD; 1.49A {Rattus norvegicus} SCOP: b.1.18.21 PDB: 1z0m_A* 2f15_A
Probab=29.05 E-value=80 Score=19.93 Aligned_cols=21 Identities=10% Similarity=0.153 Sum_probs=14.1
Q ss_pred EEEEeCCCCCeEEEE-CcCCCC
Q 048131 57 LEFNYDPQRHNVIIV-DQEGHD 77 (124)
Q Consensus 57 L~F~y~~~~h~V~~V-~~~~y~ 77 (124)
+.|.|.++..+|..+ +-.+.+
T Consensus 13 v~F~wap~a~~V~v~GdFn~W~ 34 (96)
T 1z0n_A 13 TVFRWTGGGKEVYLSGSFNNWS 34 (96)
T ss_dssp EEEEECSCCSCEEEEEGGGTTC
T ss_pred EEEEECCCCcEEEEEEEeCCCc
Confidence 578888877888777 444443
No 91
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=28.05 E-value=62 Score=27.31 Aligned_cols=30 Identities=7% Similarity=0.217 Sum_probs=24.3
Q ss_pred EEEeC-CcceEEEeCCCCCccCCCcEEEEEeC
Q 048131 94 QIVLN-HGKNFFICGVPTHCSDHGMKLEINVE 124 (124)
Q Consensus 94 ~v~l~-~G~~yfic~~~~hC~~~GmKl~I~V~ 124 (124)
.|+++ +|++||=|-...+=. .|+.-.|.|+
T Consensus 156 ~f~~~q~GT~WYHsH~~~q~~-~GL~G~lIV~ 186 (580)
T 3sqr_A 156 KFQVTQYGTTWYHSHFSLQYG-DGLFGPLIIN 186 (580)
T ss_dssp EEECCCCEEEEEEECSTTGGG-GTCEEEEEEE
T ss_pred EEECCCCcceEEeeccccccc-CcCEEEEEee
Confidence 56667 899999999877777 7998888774
No 92
>4doo_A Chalcone-flavanone isomerase family protein; chalcone-isomerase like fold, fatty-acid binding; HET: DAO; 1.90A {Arabidopsis thaliana}
Probab=27.30 E-value=43 Score=24.18 Aligned_cols=23 Identities=9% Similarity=0.239 Sum_probs=18.3
Q ss_pred cCCCCCCeeeeCCEEEEEeCCCC
Q 048131 43 QNWPEGKTFKCGDILEFNYDPQR 65 (124)
Q Consensus 43 ~~Wa~~~~f~vGD~L~F~y~~~~ 65 (124)
+-|..+.+|..||.|.|.|.++.
T Consensus 132 ~~F~~~~~~~kGd~i~~~~~p~~ 154 (205)
T 4doo_A 132 SLFKDEYKIPRNSTIDLTKDPGH 154 (205)
T ss_dssp GGGTTCCCCCTTCEEEEEEETTT
T ss_pred HHhccCCCCCCCCEEEEEEcCCC
Confidence 35555678999999999999864
No 93
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=25.64 E-value=36 Score=27.81 Aligned_cols=30 Identities=10% Similarity=0.210 Sum_probs=23.7
Q ss_pred EEEe-C-CcceEEEeCCCCCccCCCcEEEEEeC
Q 048131 94 QIVL-N-HGKNFFICGVPTHCSDHGMKLEINVE 124 (124)
Q Consensus 94 ~v~l-~-~G~~yfic~~~~hC~~~GmKl~I~V~ 124 (124)
.|++ + +|++||=|-...+=. .||--.+.|+
T Consensus 96 ~f~~~~~~GT~wYH~H~~~q~~-~Gl~G~liV~ 127 (503)
T 1hfu_A 96 KFTPAGHAGTFWYHSHFGTQYC-DGLRGPMVIY 127 (503)
T ss_dssp EECCTTCCEEEEEEECSTTGGG-GTCEEEEEEE
T ss_pred EEEeCCCCccEEEEecchhhhh-CcceeeEEEc
Confidence 5664 3 699999999887777 8998888774
No 94
>1wid_A DNA-binding protein RAV1; DNA-binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: b.142.1.2
Probab=24.87 E-value=45 Score=22.39 Aligned_cols=17 Identities=24% Similarity=0.616 Sum_probs=13.7
Q ss_pred CCCeeeeCCEEEEEeCC
Q 048131 47 EGKTFKCGDILEFNYDP 63 (124)
Q Consensus 47 ~~~~f~vGD~L~F~y~~ 63 (124)
..+.++.||.++|....
T Consensus 88 ~~~~L~~GD~~~F~~~~ 104 (130)
T 1wid_A 88 KEKNLRAGDVVSFSRSN 104 (130)
T ss_dssp HHTTCCTTCEEEEEECC
T ss_pred HHcCCCCCCEEEEEEec
Confidence 34567899999999975
No 95
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=24.73 E-value=32 Score=27.76 Aligned_cols=70 Identities=11% Similarity=0.131 Sum_probs=41.0
Q ss_pred CCeeeeCCEEEEEeCCC---CCeE-----EEECcCCCCCCCCCCCCcccccCCc---EEEeC--CcceEEEeCC----CC
Q 048131 48 GKTFKCGDILEFNYDPQ---RHNV-----IIVDQEGHDSCKPASDAKKFQTGKD---QIVLN--HGKNFFICGV----PT 110 (124)
Q Consensus 48 ~~~f~vGD~L~F~y~~~---~h~V-----~~V~~~~y~~C~~~~~~~~~~~G~~---~v~l~--~G~~yfic~~----~~ 110 (124)
..+++.||+|+.++.+. .+++ .+-.. .|. .|......|.+ .|+++ +|++||=|-. ..
T Consensus 51 ~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG----~~~~~i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~ 124 (451)
T 2uxt_A 51 TIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGP--LMG----GPARMMSPNADWAPVLPIRQNAATLWYHANTPNRTAQ 124 (451)
T ss_dssp EEEEETTCEEEEEEEECSSSCBCEEEETCCCCGG--GSC----SGGGCBCTTCEECCEEECCSCSEEEEEEECCTTTHHH
T ss_pred eEEEeCCCEEEEEEEECCCCCccEEECCccCCCC--CCC----CCcCcCCCCCeEEEEEEcCCCCcceEEecCCCCchhh
Confidence 35788999999998754 2333 22111 111 01112223332 67776 6999999987 33
Q ss_pred CccCCCcEEEEEeC
Q 048131 111 HCSDHGMKLEINVE 124 (124)
Q Consensus 111 hC~~~GmKl~I~V~ 124 (124)
|=. .||--.+.|+
T Consensus 125 q~~-~Gl~G~liV~ 137 (451)
T 2uxt_A 125 QVY-NGLAGMWLVE 137 (451)
T ss_dssp HHH-TTCEEEEEEE
T ss_pred hHh-hcceEEEEEe
Confidence 555 7888777764
No 96
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=24.20 E-value=38 Score=25.95 Aligned_cols=29 Identities=10% Similarity=0.153 Sum_probs=23.5
Q ss_pred EEEeC-CcceEEEeCCCCCc-cCCCcEEEEEe
Q 048131 94 QIVLN-HGKNFFICGVPTHC-SDHGMKLEINV 123 (124)
Q Consensus 94 ~v~l~-~G~~yfic~~~~hC-~~~GmKl~I~V 123 (124)
.|+.+ ||.+++.|....|| + .||...+.|
T Consensus 275 ~v~~~~pG~y~l~~h~~~~~~~-~g~~a~l~~ 305 (327)
T 1kbv_A 275 EFKVDIPGNYTLVDHSIFRAFN-KGALGQLKV 305 (327)
T ss_dssp EEEECSCEEEEEEESSTHHHHH-SSCEEEEEE
T ss_pred EEEeCCCeEEEEEecccccccc-CCcEEEEEE
Confidence 45556 89999999999998 7 888777765
No 97
>3e0e_A Replication protein A; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.60A {Methanococcus maripaludis} PDB: 2k5v_A
Probab=23.59 E-value=21 Score=22.73 Aligned_cols=31 Identities=32% Similarity=0.419 Sum_probs=21.9
Q ss_pred EEEEecCCCCCCccccCCCCCC--eeeeCCEEEE
Q 048131 28 TTFKVGDDGGWVFGVQNWPEGK--TFKCGDILEF 59 (124)
Q Consensus 28 ~~~~VG~~~gW~~~~~~Wa~~~--~f~vGD~L~F 59 (124)
....++|+.| .+..+.|-... .+++||.+.+
T Consensus 40 ~~~~l~DeTG-~I~~tlW~~~~~~~i~~Gdvv~i 72 (97)
T 3e0e_A 40 KSLFLKDDTG-SIRGTLWNELADFEVKKGDIAEV 72 (97)
T ss_dssp EEEEEEETTE-EEEEEEEGGGGGCCCCTTCEEEE
T ss_pred EEEEEECCCC-cEEEEEECCccccccCCCCEEEE
Confidence 3567888887 65556664432 6999999988
No 98
>1ed7_A Chitinase A1, (CHBD-CHIA1); twisted beta-sandwich, hydrolase; NMR {Bacillus circulans} SCOP: b.72.2.1
Probab=22.02 E-value=30 Score=19.19 Aligned_cols=16 Identities=13% Similarity=0.744 Sum_probs=13.2
Q ss_pred CCCCCCeeeeCCEEEE
Q 048131 44 NWPEGKTFKCGDILEF 59 (124)
Q Consensus 44 ~Wa~~~~f~vGD~L~F 59 (124)
.|+++..-.+||.+.+
T Consensus 1 ~W~~~~~Y~~Gd~Vty 16 (45)
T 1ed7_A 1 AWQVNTAYTAGQLVTY 16 (45)
T ss_dssp CCCSSEEECTTCCEEE
T ss_pred CccCCceEcCCCEEEE
Confidence 4888899999998755
No 99
>2hd9_A UPF0310 protein PH1033; pyrococcus horikoshii OT3, structural genomics, NPPSFA, NATI project on protein structural and functional analyses; HET: CIT; 1.35A {Pyrococcus horikoshii} SCOP: b.122.1.8 PDB: 1wmm_A* 2zbn_A
Probab=21.49 E-value=48 Score=22.81 Aligned_cols=29 Identities=21% Similarity=0.084 Sum_probs=21.5
Q ss_pred CeeeeCCEEEEEeCC-----------CCCeEEEECcCCCC
Q 048131 49 KTFKCGDILEFNYDP-----------QRHNVIIVDQEGHD 77 (124)
Q Consensus 49 ~~f~vGD~L~F~y~~-----------~~h~V~~V~~~~y~ 77 (124)
+..++||.+.|..++ +.-.+.+|..+.|.
T Consensus 33 r~mk~GD~~~fYhs~~~~~~~~~~~~~ivGi~eV~~e~y~ 72 (145)
T 2hd9_A 33 SRVKPGDKLVIYVRQEKDKEGNLLEPKIVGIYEVTSEPYV 72 (145)
T ss_dssp TTCCTTCEEEEEECCEECTTCCEECCEEEEEEEECSCCEE
T ss_pred HhCCCCCEEEEEEccccccCCCCCCceEEEEEEEcCCcEe
Confidence 578999999888763 34567888667775
No 100
>2p5d_A UPF0310 protein mjecl36; NPPSFA, national project on protein structural and functional analyses; 1.70A {Methanocaldococcus jannaschii}
Probab=21.39 E-value=45 Score=23.04 Aligned_cols=29 Identities=28% Similarity=0.170 Sum_probs=20.4
Q ss_pred CeeeeCCEEEEE-----eC----CCCCeEEEECcCCCC
Q 048131 49 KTFKCGDILEFN-----YD----PQRHNVIIVDQEGHD 77 (124)
Q Consensus 49 ~~f~vGD~L~F~-----y~----~~~h~V~~V~~~~y~ 77 (124)
+..++||.+.|. .+ ++.-.+.+|.++.|.
T Consensus 36 r~Mk~GD~~~fY~~~~~hs~~~~~~ivGi~eV~~e~y~ 73 (147)
T 2p5d_A 36 NKVKVGDKLIIYEIQRSGKDYKPPYIRGVYEVVSEVYK 73 (147)
T ss_dssp TTCCTTCEEEEEECCBCSTTCBCCEEEEEEEECSCCEE
T ss_pred HhCCCCCEEEEEEecccCCCCCCCEEEEEEEEeccccc
Confidence 368999999888 33 234567888667664
No 101
>4dol_A AT1G53520, 94270-95700, chalcon; chalcone-isomerase like fold, fatty-acid binding, isomerase; HET: PLM; 1.70A {Arabidopsis thaliana}
Probab=20.46 E-value=61 Score=23.51 Aligned_cols=24 Identities=8% Similarity=0.289 Sum_probs=17.9
Q ss_pred CeeeeCCEEEEEeCCCCCeEEEEC
Q 048131 49 KTFKCGDILEFNYDPQRHNVIIVD 72 (124)
Q Consensus 49 ~~f~vGD~L~F~y~~~~h~V~~V~ 72 (124)
+.|..||.|.|.|.++....+.++
T Consensus 146 ~~v~kGd~i~~~~~p~~~l~i~~~ 169 (217)
T 4dol_A 146 RPLNKGSVILLTWINTSNMLVSVS 169 (217)
T ss_dssp CCBCTTCEEEEEEEETTEEEEEEE
T ss_pred CcCCCCCEEEEEEcCCCCEEEEEe
Confidence 579999999999998654344444
No 102
>2qlv_B Protein SIP2, protein SPM2; heterotrimer, ATP-binding, carbohydrate metabolism, kinase, membrane, nucleotide-binding, nucleus; 2.60A {Saccharomyces cerevisiae} SCOP: b.1.18.21 d.353.1.1
Probab=20.01 E-value=1.1e+02 Score=23.01 Aligned_cols=15 Identities=13% Similarity=0.355 Sum_probs=12.2
Q ss_pred EEEEeCCCCCeEEEE
Q 048131 57 LEFNYDPQRHNVIIV 71 (124)
Q Consensus 57 L~F~y~~~~h~V~~V 71 (124)
++|+|..+...|...
T Consensus 6 v~f~W~~~a~~V~V~ 20 (252)
T 2qlv_B 6 VEIRWQQGGSKVYVT 20 (252)
T ss_dssp EEEEECSCCSCEEEE
T ss_pred EEEEEeCCCcEEEEE
Confidence 579999878888877
Done!