Your job contains 1 sequence.
>048133
MGHKEIDMDEGWDIIQKWITKLRRISEGLPEPPFNVDDYVMLYSSVYSTCIQGPHHGYSA
QLYNKCKQDLEEYMSSTVFPSLSEKHDEHLLRELVKRFANHKVMVKWLALCFNYLERYYI
RQRALPTISEIGLTCFRDLVFDALKHKAKDVVITLIDREREGEEIDRALLKN
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 048133
(172 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2132377 - symbol:CUL1 "cullin 1" species:3702 ... 495 5.2e-47 1
TAIR|locus:2018645 - symbol:AT1G43140 species:3702 "Arabi... 411 1.0e-37 1
TAIR|locus:2025881 - symbol:AT1G59790 species:3702 "Arabi... 399 3.9e-37 1
TAIR|locus:2024755 - symbol:CUL2 "cullin 2" species:3702 ... 370 3.3e-33 1
TAIR|locus:2025941 - symbol:AT1G59800 species:3702 "Arabi... 280 1.6e-24 1
DICTYBASE|DDB_G0284903 - symbol:culC "cullin C" species:4... 129 2.8e-07 1
UNIPROTKB|A6NE76 - symbol:CUL4B "Cullin-4B" species:9606 ... 106 0.00019 1
MGI|MGI:1919834 - symbol:Cul4b "cullin 4B" species:10090 ... 110 0.00040 1
UNIPROTKB|E2RMN1 - symbol:CUL4B "Uncharacterized protein"... 109 0.00062 1
UNIPROTKB|H7C1L6 - symbol:CUL3 "Cullin-3" species:9606 "H... 100 0.00075 1
>TAIR|locus:2132377 [details] [associations]
symbol:CUL1 "cullin 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IPI] [GO:0009733 "response to
auxin stimulus" evidence=IMP] [GO:0009793 "embryo development
ending in seed dormancy" evidence=IMP] [GO:0005819 "spindle"
evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000794 "condensed nuclear
chromosome" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=IMP]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=TAS] [GO:0010265 "SCF complex assembly" evidence=IPI]
[GO:0042752 "regulation of circadian rhythm" evidence=RCA;IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0006486 "protein glycosylation" evidence=RCA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009790
"embryo development" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010431 "seed maturation" evidence=RCA]
[GO:0010564 "regulation of cell cycle process" evidence=RCA]
[GO:0043090 "amino acid import" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048316
"seed development" evidence=RCA] [GO:0048366 "leaf development"
evidence=IMP;RCA] [GO:0048825 "cotyledon development" evidence=RCA]
[GO:0051301 "cell division" evidence=RCA] [GO:0010087 "phloem or
xylem histogenesis" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0005829
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0009873 GO:GO:0005819 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0042752 GO:GO:0009793 GO:GO:0016567 GO:GO:0007049
GO:GO:0000794 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 GO:GO:0000151 GO:GO:0009524 GO:GO:0009867
InterPro:IPR016159 SUPFAM:SSF74788 EMBL:AC002330 EMBL:AL161494
KO:K03347 HOGENOM:HOG000176712 EMBL:AJ318017 EMBL:AY046030
EMBL:AY133878 EMBL:AK222216 IPI:IPI00524614 PIR:T01092
RefSeq:NP_001031575.1 RefSeq:NP_001031576.1 RefSeq:NP_001190661.1
RefSeq:NP_567243.1 UniGene:At.24877 UniGene:At.67849
ProteinModelPortal:Q94AH6 SMR:Q94AH6 IntAct:Q94AH6 STRING:Q94AH6
PaxDb:Q94AH6 PRIDE:Q94AH6 EnsemblPlants:AT4G02570.1
EnsemblPlants:AT4G02570.2 EnsemblPlants:AT4G02570.3
EnsemblPlants:AT4G02570.4 GeneID:825648 KEGG:ath:AT4G02570
TAIR:At4g02570 InParanoid:Q94AH6 OMA:LDEGHEN PhylomeDB:Q94AH6
ProtClustDB:CLSN2689296 Genevestigator:Q94AH6 GermOnline:AT4G02570
GO:GO:0010265 Uniprot:Q94AH6
Length = 738
Score = 495 (179.3 bits), Expect = 5.2e-47, P = 5.2e-47
Identities = 92/172 (53%), Positives = 124/172 (72%)
Query: 1 MGHKEIDMDEGWDIIQKWITKLRRISEGLPEPPFNVDDYVMLYSSVYSTCIQGPHHGYSA 60
M K ID+++GWD +Q ITKL+RI EGL EP F+ + Y+MLY+++Y+ C Q P H YS
Sbjct: 1 MERKTIDLEQGWDYMQTGITKLKRILEGLNEPAFDSEQYMMLYTTIYNMCTQKPPHDYSQ 60
Query: 61 QLYNKCKQDLEEYMSSTVFPSLSEKHDEHLLRELVKRFANHKVMVKWLALCFNYLERYYI 120
QLY+K ++ EEY++STV P+L EKHDE +LREL KR++NHKVMV+WL+ F YL+RY+I
Sbjct: 61 QLYDKYREAFEEYINSTVLPALREKHDEFMLRELFKRWSNHKVMVRWLSRFFYYLDRYFI 120
Query: 121 RQRALPTISEIGLTCFRDLVFDALKHKAKDVVITLXXXXXXXXXXXXALLKN 172
+R+LP ++E+GLTCFRDLV++ L K K VI L ALLKN
Sbjct: 121 ARRSLPPLNEVGLTCFRDLVYNELHSKVKQAVIALVDKEREGEQIDRALLKN 172
>TAIR|locus:2018645 [details] [associations]
symbol:AT1G43140 species:3702 "Arabidopsis thaliana"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 KO:K03347 EMBL:AC005687 IPI:IPI00938797
RefSeq:NP_175007.2 UniGene:At.74523 ProteinModelPortal:P0CH31
SMR:P0CH31 EnsemblPlants:AT1G43140.1 GeneID:3767291
KEGG:ath:AT1G43140 TAIR:At1g43140 HOGENOM:HOG000176712 OMA:RTISKTD
Uniprot:P0CH31
Length = 721
Score = 411 (149.7 bits), Expect = 1.0e-37, P = 1.0e-37
Identities = 75/171 (43%), Positives = 116/171 (67%)
Query: 4 KE-IDMDEGWDIIQKWITKLRRISEGLPEPPFNVDDYVMLYSSVYSTCIQGPHHGYSAQL 62
KE I ++EGW +++ + KL+RI E L EPPF+ Y+ LY+ +Y C+Q P + YS +L
Sbjct: 12 KELILLEEGWSVMKTGVAKLQRILEDLSEPPFDPGQYINLYTIIYDMCLQQPPNDYSQEL 71
Query: 63 YNKCKQDLEEYMSSTVFPSLSEKHDEHLLRELVKRFANHKVMVKWLA-LCFNYLERYYIR 121
YNK + ++ Y TV PS+ E+H E++LRELVKR+ANHK++V+WL+ CF YL+R+Y+
Sbjct: 72 YNKYRGVVDHYNKETVLPSMRERHGEYMLRELVKRWANHKILVRWLSRFCF-YLDRFYVA 130
Query: 122 QRALPTISEIGLTCFRDLVFDALKHKAKDVVITLXXXXXXXXXXXXALLKN 172
+R LPT++++G T F DLV+ ++ +AKDV++ L L+KN
Sbjct: 131 RRGLPTLNDVGFTSFHDLVYQEIQSEAKDVLLALIHKEREGEQIDRTLVKN 181
>TAIR|locus:2025881 [details] [associations]
symbol:AT1G59790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC007258 GO:GO:0006511
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03347
HOGENOM:HOG000176712 IPI:IPI00517906 PIR:H96621 RefSeq:NP_176188.1
UniGene:At.52273 ProteinModelPortal:Q9XIE9 SMR:Q9XIE9 PRIDE:Q9XIE9
EnsemblPlants:AT1G59790.1 GeneID:842272 KEGG:ath:AT1G59790
TAIR:At1g59790 OMA:QNELLVM ProtClustDB:CLSN2679703
Genevestigator:Q9XIE9 Uniprot:Q9XIE9
Length = 374
Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
Identities = 81/171 (47%), Positives = 110/171 (64%)
Query: 4 KEIDMDEGWDIIQKWITKLRRISEGLPEPPFNVDDYVMLYSSVYSTCIQGPHHGYSAQLY 63
++I +EGW IQK ITKL RI EG PEP F + LY+ +Y C+Q YS QLY
Sbjct: 10 RQIKFEEGWSNIQKGITKLIRILEGEPEPTFYFSECFKLYTIIYDMCVQ--RSDYSQQLY 67
Query: 64 NKCKQDLEEYMSSTVFPSLSEKHDEHLLRELVKRFANHKVMVKWLALCFNYLERYYIRQR 123
K ++ +E+Y TV PSL EKHDE +LRELVKR+ NHK+MVKWL+ F Y++R+ +R+
Sbjct: 68 EKYRKVIEDYTIQTVLPSLREKHDEDMLRELVKRWNNHKIMVKWLSKFFVYIDRHLVRRS 127
Query: 124 ALP--TISEIGLTCFRDLVFDALKHKAKDVVITLXXXXXXXXXXXXALLKN 172
+P ++ E+GLTCF DLV+ ++ AK+VVI L AL+KN
Sbjct: 128 KIPIPSLDEVGLTCFLDLVYCEMQSTAKEVVIALIHKEREGEQIDRALVKN 178
>TAIR|locus:2024755 [details] [associations]
symbol:CUL2 "cullin 2" species:3702 "Arabidopsis
thaliana" [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] InterPro:IPR001373
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009941
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 GO:GO:0019005
eggNOG:COG5647 SUPFAM:SSF75632 EMBL:AC009525 InterPro:IPR016159
SUPFAM:SSF74788 KO:K03347 HOGENOM:HOG000176712
ProtClustDB:CLSN2689296 EMBL:AK117909 EMBL:BT006231 IPI:IPI00541917
PIR:D86160 RefSeq:NP_171797.2 UniGene:At.42569 HSSP:Q9JLV5
ProteinModelPortal:Q9SRZ0 SMR:Q9SRZ0 STRING:Q9SRZ0 PaxDb:Q9SRZ0
PRIDE:Q9SRZ0 EnsemblPlants:AT1G02980.1 GeneID:839415
KEGG:ath:AT1G02980 TAIR:At1g02980 InParanoid:Q9SRZ0 OMA:NDYHERS
PhylomeDB:Q9SRZ0 Genevestigator:Q9SRZ0 Uniprot:Q9SRZ0
Length = 742
Score = 370 (135.3 bits), Expect = 3.3e-33, P = 3.3e-33
Identities = 71/173 (41%), Positives = 110/173 (63%)
Query: 1 MGHKEIDMDEGWDIIQKWITKLRRISEGLP-EPPFNVDDYVMLYSSVYSTCIQGPHHGYS 59
M K+ ++ GW +++ + KL++I E +P EPPF+ + LY++V++ C Q P + YS
Sbjct: 1 MAKKDSVLEAGWSVMEAGVAKLQKILEEVPDEPPFDPVQRMQLYTTVHNLCTQKPPNDYS 60
Query: 60 AQLYNKCKQDLEEYMSSTVFPSLSEKHDEHLLRELVKRFANHKVMVKWLALCFNYLERYY 119
Q+Y++ +Y TV P++ EKH E++LRELVKR+AN K++V+WL+ F YL+R+Y
Sbjct: 61 QQIYDRYGGVYVDYNKQTVLPAIREKHGEYMLRELVKRWANQKILVRWLSHFFEYLDRFY 120
Query: 120 IRQRALPTISEIGLTCFRDLVFDALKHKAKDVVITLXXXXXXXXXXXXALLKN 172
R+ + PT+S +G FRDLV+ L+ KAKD V+ L ALLKN
Sbjct: 121 TRRGSHPTLSAVGFISFRDLVYQELQSKAKDAVLALIHKEREGEQIDRALLKN 173
>TAIR|locus:2025941 [details] [associations]
symbol:AT1G59800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC007258 GO:GO:0006511
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03347
HOGENOM:HOG000176712 IPI:IPI00546899 PIR:A96622 RefSeq:NP_176189.1
UniGene:At.52274 ProteinModelPortal:Q9XIE8 SMR:Q9XIE8
EnsemblPlants:AT1G59800.1 GeneID:842273 KEGG:ath:AT1G59800
TAIR:At1g59800 eggNOG:NOG310081 InParanoid:Q9XIE8 OMA:DECMLRE
PhylomeDB:Q9XIE8 ProtClustDB:CLSN2913533 Genevestigator:Q9XIE8
Uniprot:Q9XIE8
Length = 255
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 58/152 (38%), Positives = 92/152 (60%)
Query: 5 EIDMDEGWDIIQKWITKLRRISEGLPEPPFNVDDYVMLYSSVYSTCI-QGPHHGYSAQLY 63
EI + W IQ+ TKL R+ EG EP FN + +M++++ Y C + P QLY
Sbjct: 6 EIKFEVEWSNIQQGFTKLIRMIEGESEPAFNQEIMMMMHTATYRICAYKNPQ-----QLY 60
Query: 64 NKCKQDLEEYMSSTVFPSLSEKHDEHLLRELVKRFANHKVMVKWLALCFNYLERYYIRQR 123
+K ++ +E Y TV PSL EKHDE +LREL KR+ HK++V+ + YL+ ++ ++
Sbjct: 61 DKYRELIENYAIQTVLPSLREKHDECMLRELAKRWNAHKLLVRLFSRRLVYLDDSFLSKK 120
Query: 124 ALPTISEIGLTCFRDLVFDALKHKAKDVVITL 155
LP++ E+GL CFRD V+ ++ A + ++ L
Sbjct: 121 GLPSLREVGLNCFRDQVYREMQSMAAEAILAL 152
>DICTYBASE|DDB_G0284903 [details] [associations]
symbol:culC "cullin C" species:44689 "Dictyostelium
discoideum" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
dictyBase:DDB_G0284903 GO:GO:0005634 GenomeReviews:CM000153_GR
EMBL:AAFI02000073 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 HSSP:Q9JLV5
KO:K03869 RefSeq:XP_639922.1 ProteinModelPortal:Q54NZ5 SMR:Q54NZ5
STRING:Q54NZ5 EnsemblProtists:DDB0266742 GeneID:8624834
KEGG:ddi:DDB_G0284903 OMA:YRTESEN Uniprot:Q54NZ5
Length = 769
Score = 129 (50.5 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 36/133 (27%), Positives = 67/133 (50%)
Query: 42 LYSSVYSTCIQGPHHGYSAQLYNKCKQDLEEYMSSTVFPSLSEKHDEHLLRELVKRFANH 101
LY + Y+ +Q HG LYN K+ +++++ + V ++SE DE L EL + NH
Sbjct: 53 LYRNGYNMVLQ--KHG--DLLYNNLKKMVDKHLKA-VAKTVSESIDEKFLLELNSSWINH 107
Query: 102 KVMVKWLALCFNYLERYYIRQRALPTISEIGLTCFRDLVF--DALKHKAKDVVITLXXXX 159
K + + Y++R Y++Q L ++ ++GL FRD V +K + + ++++
Sbjct: 108 KTSMLMIRDILMYMDRNYVKQNNLSSVFDLGLYLFRDNVAHCSTIKDRLLNTLLSMVQKE 167
Query: 160 XXXXXXXXALLKN 172
L+KN
Sbjct: 168 REGEVIDRILIKN 180
>UNIPROTKB|A6NE76 [details] [associations]
symbol:CUL4B "Cullin-4B" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 Pfam:PF00888 GO:GO:0006511
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 EMBL:AC002476
EMBL:AL451005 HGNC:HGNC:2555 IPI:IPI00644450
ProteinModelPortal:A6NE76 SMR:A6NE76 STRING:A6NE76 PRIDE:A6NE76
Ensembl:ENST00000371323 HOGENOM:HOG000006909 HOVERGEN:HBG084579
ArrayExpress:A6NE76 Bgee:A6NE76 Uniprot:A6NE76
Length = 234
Score = 106 (42.4 bits), Expect = 0.00019, P = 0.00019
Identities = 38/168 (22%), Positives = 84/168 (50%)
Query: 9 DEGWDIIQKWITKLRRISEGLPEPPFNVDDYVMLYSSVYSTCIQGPHHGYSAQLYNKCKQ 68
DE W +++ + ++ S + +N+++ LY +V + C + SA LY + +Q
Sbjct: 18 DETWQKLKEAVEAIQN-STSIK---YNLEE---LYQAVENLC----SYKISANLYKQLRQ 66
Query: 69 DLEEYMSSTVFPSLSEKHDEHL-LRELVKRFANHKVMVKWLALCFNYLERYYIRQRA-LP 126
E+++ + + + D L L+++ + + NH + + F +L+R Y+ Q + LP
Sbjct: 67 ICEDHIKAQIHQFREDSLDSVLFLKKIDRCWQNHCRQMIMIRSIFLFLDRTYVLQNSMLP 126
Query: 127 TISEIGLTCFR-DLVFDA-LKHKAKDVVITLXXXXXXXXXXXXALLKN 172
+I ++GL FR ++ D +++K D ++ L +LL++
Sbjct: 127 SIWDMGLELFRAHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLRS 174
>MGI|MGI:1919834 [details] [associations]
symbol:Cul4b "cullin 4B" species:10090 "Mus musculus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031465 "Cul4B-RING ubiquitin ligase complex" evidence=ISO]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IMP] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 MGI:MGI:1919834
GO:GO:0005634 GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0007049 GO:GO:0006511 GO:GO:0045732
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0045750 EMBL:CH466570
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
KO:K10609 HOVERGEN:HBG003619 OrthoDB:EOG42FSH0 CTD:8450
GO:GO:0031465 EMBL:AY330868 EMBL:AK012410 EMBL:AK032701
EMBL:AK160998 EMBL:AL513356 EMBL:BC004026 EMBL:BC010347
EMBL:AB093259 IPI:IPI00224689 IPI:IPI00473987 RefSeq:NP_001103612.1
RefSeq:NP_082564.3 UniGene:Mm.327675 ProteinModelPortal:A2A432
SMR:A2A432 IntAct:A2A432 STRING:A2A432 PhosphoSite:A2A432
PaxDb:A2A432 PRIDE:A2A432 Ensembl:ENSMUST00000050083
Ensembl:ENSMUST00000115118 GeneID:72584 KEGG:mmu:72584
UCSC:uc009taa.2 InParanoid:Q91YZ7 ChiTaRS:CUL4B NextBio:336543
Bgee:A2A432 Genevestigator:A2A432 Uniprot:A2A432
Length = 970
Score = 110 (43.8 bits), Expect = 0.00040, P = 0.00040
Identities = 35/145 (24%), Positives = 73/145 (50%)
Query: 9 DEGWDIIQKWITKLRRISEGLPEPPFNVDDYVMLYSSVYSTCIQGPHHGYSAQLYNKCKQ 68
DE W +++ + ++ S + +N+++ LY +V + C H SA LY + +Q
Sbjct: 271 DETWQKLKEAVEAIQN-STSIK---YNLEE---LYQAVENLC----SHKISANLYKQLRQ 319
Query: 69 DLEEYMSSTVFPSLSEKHDEHL-LRELVKRFANHKVMVKWLALCFNYLERYYIRQRA-LP 126
E+++ + + + D L L+++ + + NH + + F +L+R Y+ Q + LP
Sbjct: 320 ICEDHIKAQIHQFREDSLDSVLFLKKIDRCWQNHCRQMIMIRSIFLFLDRTYVLQNSMLP 379
Query: 127 TISEIGLTCFRDLVFDALKHKAKDV 151
+I ++GL FR + K + K +
Sbjct: 380 SIWDMGLELFRAHIISDQKVQTKTI 404
>UNIPROTKB|E2RMN1 [details] [associations]
symbol:CUL4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:FEDSLDF EMBL:AAEX03026836
Ensembl:ENSCAFT00000029435 Uniprot:E2RMN1
Length = 982
Score = 109 (43.4 bits), Expect = 0.00062, P = 0.00062
Identities = 39/168 (23%), Positives = 84/168 (50%)
Query: 9 DEGWDIIQKWITKLRRISEGLPEPPFNVDDYVMLYSSVYSTCIQGPHHGYSAQLYNKCKQ 68
DE W +++ + ++ S + +N+++ LY +V + C + SA LY + +Q
Sbjct: 283 DETWQKLKEAVEAIQN-STSIK---YNLEE---LYQAVENLC----SYKISANLYKQLRQ 331
Query: 69 DLEEYMSSTVFPSLSEKHDEHL-LRELVKRFANHKVMVKWLALCFNYLERYYIRQRA-LP 126
E+++ + + + D L L+++ K + NH + + F +L+R Y+ Q + LP
Sbjct: 332 ICEDHIKAQIHQFREDSLDSVLFLKKIDKCWQNHCRQMIMIRSIFLFLDRTYVLQNSMLP 391
Query: 127 TISEIGLTCFR-DLVFDA-LKHKAKDVVITLXXXXXXXXXXXXALLKN 172
+I ++GL FR ++ D +++K D ++ L +LL++
Sbjct: 392 SIWDMGLELFRAHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLRS 439
>UNIPROTKB|H7C1L6 [details] [associations]
symbol:CUL3 "Cullin-3" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 Pfam:PF00888 GO:GO:0006511
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 EMBL:AC073052
EMBL:AC092679 HGNC:HGNC:2553 ChiTaRS:CUL3 Ensembl:ENST00000436172
Uniprot:H7C1L6
Length = 192
Score = 100 (40.3 bits), Expect = 0.00075, P = 0.00075
Identities = 31/144 (21%), Positives = 69/144 (47%)
Query: 3 HKEIDMDEG-----WDIIQKWITKL-RRISEGLPEPPFNVDDYVMLYSSVYSTCIQGPHH 56
+ E+ MDE WD+++ I ++ R+ + GL + LY + Y+ + H
Sbjct: 41 YTEMTMDEKYVNSIWDLLKNAIQEIQRKNNSGL--------SFEELYRNAYTMVL----H 88
Query: 57 GYSAQLYNKCKQDLEEYMSSTVFPSLSEKHDEHLLRELVKRFANHKVMVKWLALCFNYLE 116
+ +LY ++ + E++ + V + + + L+ L + + +H+ + + Y++
Sbjct: 89 KHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMD 148
Query: 117 RYYIRQRALPTISEIGLTCFRDLV 140
R Y++Q + + +GL FRD V
Sbjct: 149 RVYVQQNNVENVYNLGLIIFRDQV 172
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.138 0.430 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 172 160 0.00097 106 3 11 22 0.47 31
30 0.43 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 10
No. of states in DFA: 609 (65 KB)
Total size of DFA: 172 KB (2100 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.08u 0.12s 18.20t Elapsed: 00:00:00
Total cpu time: 18.08u 0.12s 18.20t Elapsed: 00:00:00
Start: Fri May 10 11:06:03 2013 End: Fri May 10 11:06:03 2013