BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048133
(172 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q94AH6|CUL1_ARATH Cullin-1 OS=Arabidopsis thaliana GN=CUL1 PE=1 SV=1
Length = 738
Score = 224 bits (572), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 101/172 (58%), Positives = 136/172 (79%)
Query: 1 MGHKEIDMDEGWDIIQKWITKLRRISEGLPEPPFNVDDYVMLYSSVYSTCIQGPHHGYSA 60
M K ID+++GWD +Q ITKL+RI EGL EP F+ + Y+MLY+++Y+ C Q P H YS
Sbjct: 1 MERKTIDLEQGWDYMQTGITKLKRILEGLNEPAFDSEQYMMLYTTIYNMCTQKPPHDYSQ 60
Query: 61 QLYNKCKQDLEEYMSSTVFPSLSEKHDEHLLRELVKRFANHKVMVKWLALCFNYLERYYI 120
QLY+K ++ EEY++STV P+L EKHDE +LREL KR++NHKVMV+WL+ F YL+RY+I
Sbjct: 61 QLYDKYREAFEEYINSTVLPALREKHDEFMLRELFKRWSNHKVMVRWLSRFFYYLDRYFI 120
Query: 121 RQRALPTISEIGLTCFRDLVFDALKHKAKDVVITLIDREREGEEIDRALLKN 172
+R+LP ++E+GLTCFRDLV++ L K K VI L+D+EREGE+IDRALLKN
Sbjct: 121 ARRSLPPLNEVGLTCFRDLVYNELHSKVKQAVIALVDKEREGEQIDRALLKN 172
>sp|P0CH31|CLL1_ARATH Putative cullin-like protein 1 OS=Arabidopsis thaliana GN=At1g43140
PE=3 SV=1
Length = 721
Score = 184 bits (466), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 82/168 (48%), Positives = 125/168 (74%), Gaps = 2/168 (1%)
Query: 6 IDMDEGWDIIQKWITKLRRISEGLPEPPFNVDDYVMLYSSVYSTCIQGPHHGYSAQLYNK 65
I ++EGW +++ + KL+RI E L EPPF+ Y+ LY+ +Y C+Q P + YS +LYNK
Sbjct: 15 ILLEEGWSVMKTGVAKLQRILEDLSEPPFDPGQYINLYTIIYDMCLQQPPNDYSQELYNK 74
Query: 66 CKQDLEEYMSSTVFPSLSEKHDEHLLRELVKRFANHKVMVKWLA-LCFNYLERYYIRQRA 124
+ ++ Y TV PS+ E+H E++LRELVKR+ANHK++V+WL+ CF YL+R+Y+ +R
Sbjct: 75 YRGVVDHYNKETVLPSMRERHGEYMLRELVKRWANHKILVRWLSRFCF-YLDRFYVARRG 133
Query: 125 LPTISEIGLTCFRDLVFDALKHKAKDVVITLIDREREGEEIDRALLKN 172
LPT++++G T F DLV+ ++ +AKDV++ LI +EREGE+IDR L+KN
Sbjct: 134 LPTLNDVGFTSFHDLVYQEIQSEAKDVLLALIHKEREGEQIDRTLVKN 181
>sp|Q9XIE9|CLL2_ARATH Putative cullin-like protein 2 OS=Arabidopsis thaliana GN=At1g59790
PE=3 SV=2
Length = 374
Score = 178 bits (451), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/171 (52%), Positives = 121/171 (70%), Gaps = 4/171 (2%)
Query: 4 KEIDMDEGWDIIQKWITKLRRISEGLPEPPFNVDDYVMLYSSVYSTCIQGPHHGYSAQLY 63
++I +EGW IQK ITKL RI EG PEP F + LY+ +Y C+Q YS QLY
Sbjct: 10 RQIKFEEGWSNIQKGITKLIRILEGEPEPTFYFSECFKLYTIIYDMCVQ--RSDYSQQLY 67
Query: 64 NKCKQDLEEYMSSTVFPSLSEKHDEHLLRELVKRFANHKVMVKWLALCFNYLERYYIRQR 123
K ++ +E+Y TV PSL EKHDE +LRELVKR+ NHK+MVKWL+ F Y++R+ +R+
Sbjct: 68 EKYRKVIEDYTIQTVLPSLREKHDEDMLRELVKRWNNHKIMVKWLSKFFVYIDRHLVRRS 127
Query: 124 A--LPTISEIGLTCFRDLVFDALKHKAKDVVITLIDREREGEEIDRALLKN 172
+P++ E+GLTCF DLV+ ++ AK+VVI LI +EREGE+IDRAL+KN
Sbjct: 128 KIPIPSLDEVGLTCFLDLVYCEMQSTAKEVVIALIHKEREGEQIDRALVKN 178
>sp|Q9SRZ0|CUL2_ARATH Cullin-2 OS=Arabidopsis thaliana GN=CUL2 PE=1 SV=1
Length = 742
Score = 172 bits (435), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 80/173 (46%), Positives = 121/173 (69%), Gaps = 1/173 (0%)
Query: 1 MGHKEIDMDEGWDIIQKWITKLRRISEGLP-EPPFNVDDYVMLYSSVYSTCIQGPHHGYS 59
M K+ ++ GW +++ + KL++I E +P EPPF+ + LY++V++ C Q P + YS
Sbjct: 1 MAKKDSVLEAGWSVMEAGVAKLQKILEEVPDEPPFDPVQRMQLYTTVHNLCTQKPPNDYS 60
Query: 60 AQLYNKCKQDLEEYMSSTVFPSLSEKHDEHLLRELVKRFANHKVMVKWLALCFNYLERYY 119
Q+Y++ +Y TV P++ EKH E++LRELVKR+AN K++V+WL+ F YL+R+Y
Sbjct: 61 QQIYDRYGGVYVDYNKQTVLPAIREKHGEYMLRELVKRWANQKILVRWLSHFFEYLDRFY 120
Query: 120 IRQRALPTISEIGLTCFRDLVFDALKHKAKDVVITLIDREREGEEIDRALLKN 172
R+ + PT+S +G FRDLV+ L+ KAKD V+ LI +EREGE+IDRALLKN
Sbjct: 121 TRRGSHPTLSAVGFISFRDLVYQELQSKAKDAVLALIHKEREGEQIDRALLKN 173
>sp|Q9XIE8|CLL3_ARATH Cullin-like protein 3 OS=Arabidopsis thaliana GN=At1g59800 PE=3
SV=2
Length = 255
Score = 137 bits (344), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 106/168 (63%), Gaps = 4/168 (2%)
Query: 5 EIDMDEGWDIIQKWITKLRRISEGLPEPPFNVDDYVMLYSSVYSTCIQGPHHGYSAQLYN 64
EI + W IQ+ TKL R+ EG EP FN + +M++++ Y C + QLY+
Sbjct: 6 EIKFEVEWSNIQQGFTKLIRMIEGESEPAFNQEIMMMMHTATYRICA----YKNPQQLYD 61
Query: 65 KCKQDLEEYMSSTVFPSLSEKHDEHLLRELVKRFANHKVMVKWLALCFNYLERYYIRQRA 124
K ++ +E Y TV PSL EKHDE +LREL KR+ HK++V+ + YL+ ++ ++
Sbjct: 62 KYRELIENYAIQTVLPSLREKHDECMLRELAKRWNAHKLLVRLFSRRLVYLDDSFLSKKG 121
Query: 125 LPTISEIGLTCFRDLVFDALKHKAKDVVITLIDREREGEEIDRALLKN 172
LP++ E+GL CFRD V+ ++ A + ++ LI +EREGE+IDR L++N
Sbjct: 122 LPSLREVGLNCFRDQVYREMQSMAAEAILALIHKEREGEQIDRELVRN 169
>sp|Q54NZ5|CUL3_DICDI Cullin-3 OS=Dictyostelium discoideum GN=culC PE=3 SV=1
Length = 769
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 77/133 (57%), Gaps = 7/133 (5%)
Query: 42 LYSSVYSTCIQGPHHGYSAQLYNKCKQDLEEYMSSTVFPSLSEKHDEHLLRELVKRFANH 101
LY + Y+ +Q HG LYN K+ +++++ + V ++SE DE L EL + NH
Sbjct: 53 LYRNGYNMVLQ--KHG--DLLYNNLKKMVDKHLKA-VAKTVSESIDEKFLLELNSSWINH 107
Query: 102 KVMVKWLALCFNYLERYYIRQRALPTISEIGLTCFRDLVF--DALKHKAKDVVITLIDRE 159
K + + Y++R Y++Q L ++ ++GL FRD V +K + + +++++ +E
Sbjct: 108 KTSMLMIRDILMYMDRNYVKQNNLSSVFDLGLYLFRDNVAHCSTIKDRLLNTLLSMVQKE 167
Query: 160 REGEEIDRALLKN 172
REGE IDR L+KN
Sbjct: 168 REGEVIDRILIKN 180
>sp|Q13619|CUL4A_HUMAN Cullin-4A OS=Homo sapiens GN=CUL4A PE=1 SV=3
Length = 759
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 74/135 (54%), Gaps = 8/135 (5%)
Query: 42 LYSSVYSTCIQGPHHGYSAQLYNKCKQDLEEYMSSTVFPSLSEKHDEHL-LRELVKRFAN 100
LY +V + C H S LY + +Q E+++ + + P + D L L+++ + +
Sbjct: 86 LYQAVENLC----SHKVSPMLYKQLRQACEDHVQAQILPFREDSLDSVLFLKKINTCWQD 141
Query: 101 HKVMVKWLALCFNYLERYYIRQRA-LPTISEIGLTCFRDLVFD--ALKHKAKDVVITLID 157
H + + F +L+R Y+ Q + LP+I ++GL FR + ++ K D ++ LI+
Sbjct: 142 HCRQMIMIRSIFLFLDRTYVLQNSTLPSIWDMGLELFRTHIISDKMVQSKTIDGILLLIE 201
Query: 158 REREGEEIDRALLKN 172
RER GE +DR+LL++
Sbjct: 202 RERSGEAVDRSLLRS 216
>sp|Q9JLV5|CUL3_MOUSE Cullin-3 OS=Mus musculus GN=Cul3 PE=1 SV=1
Length = 768
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 83/164 (50%), Gaps = 15/164 (9%)
Query: 12 WDIIQKWITKL-RRISEGLPEPPFNVDDYVMLYSSVYSTCIQGPHHGYSAQLYNKCKQDL 70
WD+++ I ++ R+ + GL + LY + Y+ + H + +LY ++ +
Sbjct: 34 WDLLKNAIQEIQRKNNSGL--------SFEELYRNAYTMVL----HKHGEKLYTGLREVV 81
Query: 71 EEYMSSTVFPSLSEKHDEHLLRELVKRFANHKVMVKWLALCFNYLERYYIRQRALPTISE 130
E++ + V + + + L+ L + + +H+ + + Y++R Y++Q + +
Sbjct: 82 TEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQNNVENVYN 141
Query: 131 IGLTCFRDLV--FDALKHKAKDVVITLIDREREGEEIDRALLKN 172
+GL FRD V + ++ + ++ +I RER+GE +DR ++N
Sbjct: 142 LGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRN 185
>sp|B5DF89|CUL3_RAT Cullin-3 OS=Rattus norvegicus GN=Cul3 PE=1 SV=2
Length = 768
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 83/164 (50%), Gaps = 15/164 (9%)
Query: 12 WDIIQKWITKL-RRISEGLPEPPFNVDDYVMLYSSVYSTCIQGPHHGYSAQLYNKCKQDL 70
WD+++ I ++ R+ + GL + LY + Y+ + H + +LY ++ +
Sbjct: 34 WDLLKNAIQEIQRKNNSGL--------SFEELYRNAYTMVL----HKHGEKLYTGLREVV 81
Query: 71 EEYMSSTVFPSLSEKHDEHLLRELVKRFANHKVMVKWLALCFNYLERYYIRQRALPTISE 130
E++ + V + + + L+ L + + +H+ + + Y++R Y++Q + +
Sbjct: 82 TEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQNNVENVYN 141
Query: 131 IGLTCFRDLV--FDALKHKAKDVVITLIDREREGEEIDRALLKN 172
+GL FRD V + ++ + ++ +I RER+GE +DR ++N
Sbjct: 142 LGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRN 185
>sp|Q13618|CUL3_HUMAN Cullin-3 OS=Homo sapiens GN=CUL3 PE=1 SV=2
Length = 768
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 83/164 (50%), Gaps = 15/164 (9%)
Query: 12 WDIIQKWITKL-RRISEGLPEPPFNVDDYVMLYSSVYSTCIQGPHHGYSAQLYNKCKQDL 70
WD+++ I ++ R+ + GL + LY + Y+ + H + +LY ++ +
Sbjct: 34 WDLLKNAIQEIQRKNNSGL--------SFEELYRNAYTMVL----HKHGEKLYTGLREVV 81
Query: 71 EEYMSSTVFPSLSEKHDEHLLRELVKRFANHKVMVKWLALCFNYLERYYIRQRALPTISE 130
E++ + V + + + L+ L + + +H+ + + Y++R Y++Q + +
Sbjct: 82 TEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQNNVENVYN 141
Query: 131 IGLTCFRDLV--FDALKHKAKDVVITLIDREREGEEIDRALLKN 172
+GL FRD V + ++ + ++ +I RER+GE +DR ++N
Sbjct: 142 LGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRN 185
>sp|Q6GPF3|CUL3B_XENLA Cullin-3-B OS=Xenopus laevis GN=cul3b PE=1 SV=1
Length = 768
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 83/164 (50%), Gaps = 15/164 (9%)
Query: 12 WDIIQKWITKL-RRISEGLPEPPFNVDDYVMLYSSVYSTCIQGPHHGYSAQLYNKCKQDL 70
WD+++ I ++ R+ + GL + LY + Y+ + H + +LY ++ +
Sbjct: 34 WDLLKNAIQEIQRKNNSGLS--------FEELYRNAYTMVL----HKHGEKLYTGLREVV 81
Query: 71 EEYMSSTVFPSLSEKHDEHLLRELVKRFANHKVMVKWLALCFNYLERYYIRQRALPTISE 130
E++ + V + + + L+ L + + +H+ + + Y++R Y++Q + +
Sbjct: 82 TEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQNNVENVYN 141
Query: 131 IGLTCFRDLV--FDALKHKAKDVVITLIDREREGEEIDRALLKN 172
+GL FRD V + ++ + ++ +I RER+GE +DR ++N
Sbjct: 142 LGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRN 185
>sp|Q6DE95|CUL3A_XENLA Cullin-3-A OS=Xenopus laevis GN=cul3a PE=1 SV=1
Length = 768
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 83/164 (50%), Gaps = 15/164 (9%)
Query: 12 WDIIQKWITKL-RRISEGLPEPPFNVDDYVMLYSSVYSTCIQGPHHGYSAQLYNKCKQDL 70
WD+++ I ++ R+ + GL + LY + Y+ + H + +LY ++ +
Sbjct: 34 WDLLKNAIQEIQRKNNSGL--------SFEELYRNAYTMVL----HKHGEKLYTGLREVV 81
Query: 71 EEYMSSTVFPSLSEKHDEHLLRELVKRFANHKVMVKWLALCFNYLERYYIRQRALPTISE 130
E++ + V + + + L+ L + + +H+ + + Y++R Y++Q + +
Sbjct: 82 TEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQNNVENVYN 141
Query: 131 IGLTCFRDLV--FDALKHKAKDVVITLIDREREGEEIDRALLKN 172
+GL FRD V + ++ + ++ +I RER+GE +DR ++N
Sbjct: 142 LGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRN 185
>sp|A4IHP4|CUL3_XENTR Cullin-3 OS=Xenopus tropicalis GN=cul3 PE=2 SV=1
Length = 768
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 83/164 (50%), Gaps = 15/164 (9%)
Query: 12 WDIIQKWITKL-RRISEGLPEPPFNVDDYVMLYSSVYSTCIQGPHHGYSAQLYNKCKQDL 70
WD+++ I ++ R+ + GL + LY + Y+ + H + +LY ++ +
Sbjct: 34 WDLLKNAIQEIQRKNNSGL--------SFEELYRNAYTMVL----HKHGEKLYTGLREVV 81
Query: 71 EEYMSSTVFPSLSEKHDEHLLRELVKRFANHKVMVKWLALCFNYLERYYIRQRALPTISE 130
E++ + V + + + L+ L + + +H+ + + Y++R Y++Q + +
Sbjct: 82 TEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQNNVENVYN 141
Query: 131 IGLTCFRDLV--FDALKHKAKDVVITLIDREREGEEIDRALLKN 172
+GL FRD V + ++ + ++ +I RER+GE +DR ++N
Sbjct: 142 LGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRGAIRN 185
>sp|A2A432|CUL4B_MOUSE Cullin-4B OS=Mus musculus GN=Cul4b PE=1 SV=1
Length = 970
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 81/161 (50%), Gaps = 15/161 (9%)
Query: 9 DEGWDIIQKWITKLRRISEGLPEPPFNVDDYVMLYSSVYSTCIQGPHHGYSAQLYNKCKQ 68
DE W +++ + ++ + +N+++ LY +V + C H SA LY + +Q
Sbjct: 271 DETWQKLKEAVEAIQNSTS----IKYNLEE---LYQAVENLC----SHKISANLYKQLRQ 319
Query: 69 DLEEYMSSTVFPSLSEKHDEHLLRELVKR-FANHKVMVKWLALCFNYLERYYIRQRA-LP 126
E+++ + + + D L + + R + NH + + F +L+R Y+ Q + LP
Sbjct: 320 ICEDHIKAQIHQFREDSLDSVLFLKKIDRCWQNHCRQMIMIRSIFLFLDRTYVLQNSMLP 379
Query: 127 TISEIGLTCFRDLVFDALKHKAK--DVVITLIDREREGEEI 165
+I ++GL FR + K + K D ++ LI+RER GE I
Sbjct: 380 SIWDMGLELFRAHIISDQKVQTKTIDGILLLIERERNGEAI 420
>sp|O60999|CUL1_DICDI Cullin-1 OS=Dictyostelium discoideum GN=culA PE=1 SV=1
Length = 770
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 91/192 (47%), Gaps = 31/192 (16%)
Query: 4 KEIDMDEGWDIIQKWITKL-RRISEGLPEPPFNVDDYVMLYSSVYSTCI----------- 51
+ + +D+ W +++ I K+ +++G P+ ++ LY+ VY C
Sbjct: 11 RSVKLDDIWPELEEGIYKIITDLNKGFPK-----QKWIALYTHVYDYCAASQSKSSAKVG 65
Query: 52 ----QGPHHGYSAQ-LYNKCKQDLEEYMSSTVFPSLSE-KHDEHLLRELVKRFANHKVMV 105
Q Y + LYN+ L+++MS + L+E K DE LL + + +
Sbjct: 66 MPKQQASGANYVGEDLYNRLNLFLKKHMSQLL--KLTETKMDEPLLNYYYTEWDRYTSAM 123
Query: 106 KWLALCFNYLERYYIR------QRALPTISEIGLTCFRDLVFDALKHKAKDVVITLIDRE 159
K++ F Y+ RY+I+ ++ + I + L +RD +F LK + + ++ +I+ E
Sbjct: 124 KYINNIFQYMNRYWIKREIDDGKKEVYEIFILSLVIWRDCLFTPLKQRLTNSLLDIIESE 183
Query: 160 REGEEIDRALLK 171
R G +I+ L+K
Sbjct: 184 RNGYQINTHLIK 195
>sp|Q3TCH7|CUL4A_MOUSE Cullin-4A OS=Mus musculus GN=Cul4a PE=1 SV=1
Length = 759
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 67/128 (52%), Gaps = 8/128 (6%)
Query: 42 LYSSVYSTCIQGPHHGYSAQLYNKCKQDLEEYMSSTVFPSLSEKHDEHL-LRELVKRFAN 100
LY +V + C H S LY + +Q E+++ + + P + D L L+++ + +
Sbjct: 86 LYQAVENLC----SHKVSPTLYKQLRQVCEDHVQAQILPFREDSLDSVLFLKKINTCWQD 141
Query: 101 HKVMVKWLALCFNYLERYYIRQRA-LPTISEIGLTCFRDLVFD--ALKHKAKDVVITLID 157
H + + F +L+R Y+ Q + LP+I ++GL FR+ + ++ K D ++ LI
Sbjct: 142 HCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRNHIISDRMVQSKTIDGILLLIG 201
Query: 158 REREGEEI 165
RER GE +
Sbjct: 202 RERSGEAV 209
>sp|Q9WTX6|CUL1_MOUSE Cullin-1 OS=Mus musculus GN=Cul1 PE=1 SV=1
Length = 776
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 86/198 (43%), Gaps = 36/198 (18%)
Query: 2 GHKEIDMDEGWDIIQKWITKLRRISEGLPEPPFNVDDYVMLYSSVYSTCIQ--------- 52
G K+I +D+ WD ++ I ++ Y+ LY+ VY+ C
Sbjct: 11 GLKQIGLDQIWDDLRAGIQQV------YTRQSMAKSRYMELYTHVYNYCTSVHQSNQARG 64
Query: 53 --------------GPHHGYSAQLYNKCKQDLEEYMSSTVFPSLSEKHDEHLLRELVKRF 98
G +LY + K+ L+ Y+++ + + DE +L+ +++
Sbjct: 65 AGVPPSKSKKGQTPGGAQFVGLELYKRLKEFLKNYLTN-LLKDGEDLMDESVLKFYTQQW 123
Query: 99 ANHKVMVKWLALCFNYLERYYIRQ------RALPTISEIGLTCFRDLVFDALKHKAKDVV 152
+++ K L YL R+++R+ + + I + L +RD +F L + + V
Sbjct: 124 EDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIYEIYSLALVTWRDCLFRPLNKQVTNAV 183
Query: 153 ITLIDREREGEEIDRALL 170
+ LI++ER GE I+ L+
Sbjct: 184 LKLIEKERNGETINTRLI 201
>sp|Q5R4G6|CUL1_PONAB Cullin-1 OS=Pongo abelii GN=CUL1 PE=2 SV=1
Length = 776
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 86/198 (43%), Gaps = 36/198 (18%)
Query: 2 GHKEIDMDEGWDIIQKWITKLRRISEGLPEPPFNVDDYVMLYSSVYSTCIQ--------- 52
G K+I +D+ WD ++ I ++ Y+ LY+ VY+ C
Sbjct: 11 GLKQIGLDQIWDDLRAGIQQV------YTRQSMAKSRYMELYTHVYNYCTSVHQSNQARG 64
Query: 53 --------------GPHHGYSAQLYNKCKQDLEEYMSSTVFPSLSEKHDEHLLRELVKRF 98
G +LY + K+ L+ Y+++ + + DE +L+ +++
Sbjct: 65 AGVPPSKSKKGQTPGGAQFVGLELYKRLKEFLKNYLTN-LLKDGEDLMDESVLKFYTQQW 123
Query: 99 ANHKVMVKWLALCFNYLERYYIRQ------RALPTISEIGLTCFRDLVFDALKHKAKDVV 152
+++ K L YL R+++R+ + + I + L +RD +F L + + V
Sbjct: 124 EDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIYEIYSLALVTWRDCLFRPLNKQVTNAV 183
Query: 153 ITLIDREREGEEIDRALL 170
+ LI++ER GE I+ L+
Sbjct: 184 LKLIEKERNGETINTRLI 201
>sp|Q13616|CUL1_HUMAN Cullin-1 OS=Homo sapiens GN=CUL1 PE=1 SV=2
Length = 776
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 86/198 (43%), Gaps = 36/198 (18%)
Query: 2 GHKEIDMDEGWDIIQKWITKLRRISEGLPEPPFNVDDYVMLYSSVYSTCIQ--------- 52
G K+I +D+ WD ++ I ++ Y+ LY+ VY+ C
Sbjct: 11 GLKQIGLDQIWDDLRAGIQQV------YTRQSMAKSRYMELYTHVYNYCTSVHQSNQARG 64
Query: 53 --------------GPHHGYSAQLYNKCKQDLEEYMSSTVFPSLSEKHDEHLLRELVKRF 98
G +LY + K+ L+ Y+++ + + DE +L+ +++
Sbjct: 65 AGVPPSKSKKGQTPGGAQFVGLELYKRLKEFLKNYLTN-LLKDGEDLMDESVLKFYTQQW 123
Query: 99 ANHKVMVKWLALCFNYLERYYIRQ------RALPTISEIGLTCFRDLVFDALKHKAKDVV 152
+++ K L YL R+++R+ + + I + L +RD +F L + + V
Sbjct: 124 EDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIYEIYSLALVTWRDCLFRPLNKQVTNAV 183
Query: 153 ITLIDREREGEEIDRALL 170
+ LI++ER GE I+ L+
Sbjct: 184 LKLIEKERNGETINTRLI 201
>sp|Q13620|CUL4B_HUMAN Cullin-4B OS=Homo sapiens GN=CUL4B PE=1 SV=4
Length = 913
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 82/161 (50%), Gaps = 15/161 (9%)
Query: 9 DEGWDIIQKWITKLRRISEGLPEPPFNVDDYVMLYSSVYSTCIQGPHHGYSAQLYNKCKQ 68
DE W +++ + ++ + +N+++ LY +V + C + SA LY + +Q
Sbjct: 214 DETWQKLKEAVEAIQNSTS----IKYNLEE---LYQAVENLC----SYKISANLYKQLRQ 262
Query: 69 DLEEYMSSTVFPSLSEKHDEHLLRELVKR-FANHKVMVKWLALCFNYLERYYIRQRA-LP 126
E+++ + + + D L + + R + NH + + F +L+R Y+ Q + LP
Sbjct: 263 ICEDHIKAQIHQFREDSLDSVLFLKKIDRCWQNHCRQMIMIRSIFLFLDRTYVLQNSMLP 322
Query: 127 TISEIGLTCFRDLVFD--ALKHKAKDVVITLIDREREGEEI 165
+I ++GL FR + +++K D ++ LI+RER GE I
Sbjct: 323 SIWDMGLELFRAHIISDQKVQNKTIDGILLLIERERNGEAI 363
>sp|Q24311|CUL1_DROME Cullin homolog 1 OS=Drosophila melanogaster GN=lin19 PE=1 SV=2
Length = 774
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 88/191 (46%), Gaps = 28/191 (14%)
Query: 3 HKEIDMDEGWDIIQKWITKLRRISEGLPEPPFNVDDYVMLYSSVYSTC--IQGPHHGYSA 60
K +++D+ W + + I ++ + L Y+ Y+ VY C + G S+
Sbjct: 11 QKLVNLDDIWSELVEGIMQVFEHEKSLTRSQ-----YMRFYTHVYDYCTSVSAAPSGRSS 65
Query: 61 -----------QLYNKCKQDLEEYMSS--TVFPSLSEKHDEHLLRELVKRFANHKVMVKW 107
+LY++ +Q L+ Y+S T F ++S +E LL K++ +++
Sbjct: 66 GKTGGAQLVGKKLYDRLEQFLKSYLSELLTKFKAIS--GEEVLLSRYTKQWKSYQFSSTV 123
Query: 108 LALCFNYLERYYIR------QRALPTISEIGLTCFRDLVFDALKHKAKDVVITLIDRERE 161
L NYL R +++ Q+ + I + L ++ +F L V+ I+ ER+
Sbjct: 124 LDGICNYLNRNWVKRECEEGQKGIYKIYRLALVAWKGHLFQVLNEPVTKAVLKSIEEERQ 183
Query: 162 GEEIDRALLKN 172
G+ I+R+L+++
Sbjct: 184 GKLINRSLVRD 194
>sp|Q17391|CUL3_CAEEL Cullin-3 OS=Caenorhabditis elegans GN=cul-3 PE=1 SV=2
Length = 777
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 10 EGWDIIQKWITKL-RRISEGLPEPPFNVDDYVMLYSSVYSTCIQGPHHGYSAQLYNKCKQ 68
+ W+++++ I ++ R+ + GL + LY + Y+ + H + +LYN K
Sbjct: 29 QTWELLKRAIQEIQRKNNSGLS--------FEELYRNAYTMVL----HKHGERLYNGLKD 76
Query: 69 DLEEYMSSTVFPSLSEKHDEHLLRELVKRFANHKVMVKWLALCFNYLERYYIRQR--ALP 126
++++M+S + + L + + +A+H V + + Y++R Y+ Q LP
Sbjct: 77 VIQDHMASVRIRIIESMNSGSFLETVAESWADHTVAMVMIRDILMYMDRIYVAQNNHVLP 136
Query: 127 TISEIGLTCFRDLVF--DALKHKAKDVVITLIDREREGEEIDRALLKN 172
+ +GL +R + + + + +D ++ LI +R+ +I+ +KN
Sbjct: 137 -VYNLGLDAYRTEILRQNGIGDRIRDALLELIKLDRKSNQINWHGIKN 183
>sp|Q9ZVH4|CUL3A_ARATH Cullin-3A OS=Arabidopsis thaliana GN=CUL3A PE=1 SV=1
Length = 732
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 70/166 (42%), Gaps = 14/166 (8%)
Query: 9 DEGWDIIQKWITKLRRISEGLPEPPFNVDDYVMLYSSVYSTCIQGPHHGYSAQLYNKCKQ 68
D+ W I+++ I ++ +N D + + +Y H + +LY
Sbjct: 26 DKTWQILERAIHQI-----------YNQDASGLSFEELYRNAYNMVLHKFGEKLYTGFIA 74
Query: 69 DLEEYMSSTVFPSLSEKHDEHLLRELVKRFANHKVMVKWLALCFNYLERYYIRQRALPTI 128
+ ++ + L EL K++ H ++ + Y++R YI +
Sbjct: 75 TMTSHLKEKS-KLIEAAQGGSFLEELNKKWNEHNKALEMIRDILMYMDRTYIESTKKTHV 133
Query: 129 SEIGLTCFRDLV--FDALKHKAKDVVITLIDREREGEEIDRALLKN 172
+GL +RD V F + + + ++ L+ +ER GE IDR L++N
Sbjct: 134 HPMGLNLWRDNVVHFTKIHTRLLNTLLDLVQKERIGEVIDRGLMRN 179
>sp|Q9C9L0|CUL3B_ARATH Cullin-3B OS=Arabidopsis thaliana GN=CUL3B PE=1 SV=1
Length = 732
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 64/133 (48%), Gaps = 7/133 (5%)
Query: 42 LYSSVYSTCIQGPHHGYSAQLYNKCKQDLEEYMSSTVFPSLSEKHDEHLLRELVKRFANH 101
LY + Y+ + H Y +LY + ++ + S+ E L L +++ +H
Sbjct: 52 LYRNAYNMVL----HKYGDKLYTGLVTTMTFHLKE-ICKSIEEAQGGAFLELLNRKWNDH 106
Query: 102 KVMVKWLALCFNYLERYYIRQRALPTISEIGLTCFRDLVFDALKHKAK--DVVITLIDRE 159
++ + Y++R Y+ + E+GL +RD V + K + + + ++ L+ +E
Sbjct: 107 NKALQMIRDILMYMDRTYVSTTKKTHVHELGLHLWRDNVVYSSKIQTRLLNTLLDLVHKE 166
Query: 160 REGEEIDRALLKN 172
R GE IDR L++N
Sbjct: 167 RTGEVIDRVLMRN 179
>sp|Q8LGH4|CUL4_ARATH Cullin-4 OS=Arabidopsis thaliana GN=CUL4 PE=1 SV=1
Length = 792
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 75/139 (53%), Gaps = 12/139 (8%)
Query: 38 DYVMLYSSVYSTCIQGPHHGYSAQLYNKCKQDLEEYMSSTVFPSLSEKHDEHLLRELVKR 97
D LY +V + C+ H +LY++ +++ EE++S+ + + + D + V++
Sbjct: 115 DLESLYQAVDNLCL----HKLDGKLYDQIEKECEEHISAALQSLVGQNTDLTVFLSRVEK 170
Query: 98 ----FANHKVMVKWLALCFNYLERYYIRQRALPTISEIGLTCFRDLVFDALKHKAKDV-- 151
F + +M++ +AL + +Y I+ + ++ E+GL FR + A + + + V
Sbjct: 171 CWQDFCDQMLMIRSIALTLD--RKYVIQNPNVRSLWEMGLQLFRKHLSLAPEVEQRTVKG 228
Query: 152 VITLIDREREGEEIDRALL 170
++++I++ER E ++R LL
Sbjct: 229 LLSMIEKERLAEAVNRTLL 247
>sp|Q9XZJ3|CUL2_DICDI Cullin-2 OS=Dictyostelium discoideum GN=culB PE=2 SV=1
Length = 771
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 28/177 (15%)
Query: 1 MGHKEIDMDEGWDIIQKWITKLRRISEGLPEPPFNVDDYVMLYSSVYSTCIQGPHHGYSA 60
+G ++ID + W I + K+ S+ + + LY VY CI P Y
Sbjct: 5 LGRQDIDFNTIWKNIADQVYKILTGSQNVSA--------MFLYEDVYKLCIAQPQ-PYCE 55
Query: 61 QLYNKCKQDLEEYMSSTVFPSLSEKHDEHLLRELVKRFANHKVMVKWLALC----FNYLE 116
LY K+ E+++ + L K D + E +K++ K+ LC F YL
Sbjct: 56 PLYENIKKFFEQHVDQILLIILDTKSDT--ISEYLKQW---KLFFSGCELCNKVIFRYLN 110
Query: 117 RYYIRQRAL-------PTISEI---GLTCFRDLVFDALKHKAKDVVITLIDREREGE 163
+I ++ L P + EI GL +++ +F +K + V LI ++R+GE
Sbjct: 111 LNWINKKILDKKFGHPPDVYEIQILGLMIWKERLFFKIKDRVLKCVEILIQKDRDGE 167
>sp|Q17389|CUL1_CAEEL Cullin-1 OS=Caenorhabditis elegans GN=cul-1 PE=1 SV=1
Length = 780
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 64/157 (40%), Gaps = 28/157 (17%)
Query: 38 DYVMLYSSVYSTCIQ------------------GPHHGYSAQLYN-KCKQDLEEYMSSTV 78
DY+ LY+SVY C P A + Q +EEY+ + V
Sbjct: 37 DYMTLYTSVYDYCTSITLSTSRRDGEDGRAESSTPARTAGADFVGHEMYQRVEEYVKAYV 96
Query: 79 FPSL---SEKHDEHLLRELVKRFANHKVMVKWLALCFNYLERYYIRQ------RALPTIS 129
+E E LL+ + N ++ K + F YL R++IR+ + +
Sbjct: 97 IAVCEKGAELSGEDLLKYYTTEWENFRISSKVMDGIFAYLNRHWIRRELDEGHENIYMVY 156
Query: 130 EIGLTCFRDLVFDALKHKAKDVVITLIDREREGEEID 166
+ L ++ +F+ LK K D ++ LI ER G I+
Sbjct: 157 TLALVVWKRNLFNDLKDKVIDAMLELIRSERTGSMIN 193
>sp|Q12018|CDC53_YEAST Cell division control protein 53 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CDC53 PE=1 SV=1
Length = 815
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 74/155 (47%), Gaps = 34/155 (21%)
Query: 39 YVMLYSSVYSTCIQGPHHG---------------YSAQLYNKCKQDLEEYMSSTVFPSLS 83
Y+ +Y+++Y+ C+ +++Y K K L+ Y+ +
Sbjct: 48 YMEVYTAIYNYCVNKSRSSGHFSTDSRTGQSTILVGSEIYEKLKNYLKNYILN-----FK 102
Query: 84 EKHDEHLLRELVKRFANHKVMVKWLALCFNYLERYYIR------QRALPTISEIGLTCFR 137
+ + E L+ VKR+ + +L F+Y+ RY+++ +R + ++ + L ++
Sbjct: 103 QSNSETFLQFYVKRWKRFTIGAIFLNHAFDYMNRYWVQKERSDGKRHIFDVNTLCLMTWK 162
Query: 138 DLVFDALKHKAKDVVIT-LIDR---EREGEEIDRA 168
+++FD +KDV+I L+D+ REG+ I R+
Sbjct: 163 EVMFDP----SKDVLINELLDQVTLGREGQIIQRS 193
>sp|Q09760|CUL3_SCHPO Cullin-3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=cul3 PE=1 SV=2
Length = 785
Score = 38.5 bits (88), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/199 (18%), Positives = 79/199 (39%), Gaps = 42/199 (21%)
Query: 5 EIDMDEGWDIIQKWITKLRRISEGLPEPPFNVDDYVMLYSSVYSTCIQGPHHGYSAQLYN 64
++D W+++Q+ I + + S + LY + Y + H Y +LYN
Sbjct: 19 QVDFATHWEVLQRAIGDIFQKSTSQLS-------FEELYRNAYILVL----HKYGEKLYN 67
Query: 65 KCKQDLEEYMSSTVFPSLSEKHDEHLL----------------------------RELVK 96
+ + + P++ + +D LL LV
Sbjct: 68 HVQDVIRSRLKEETVPAIYKNYDASLLGNALLDIRKNDSYSTSWSRSLEAAHRFLSSLVN 127
Query: 97 RFANHKVMVKWLALCFNYLERYYIRQRALPTISEIGLTCFRDLVF---DALKHKAKDVVI 153
+ +H V ++ ++ YL++ Y + ++E G+ FR++V + K + ++
Sbjct: 128 SWKDHIVSMQMISSVLKYLDKVYSKSADKVPVNENGIYIFREVVLLNSFEIGEKCVETIL 187
Query: 154 TLIDREREGEEIDRALLKN 172
L+ ER+G I+R L+ +
Sbjct: 188 ILVYLERKGNTINRPLIND 206
>sp|Q21346|CUL6_CAEEL Cullin-6 OS=Caenorhabditis elegans GN=cul-6 PE=1 SV=1
Length = 729
Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 13/141 (9%)
Query: 39 YVMLYSSVYSTCIQ---GPHHGYSAQLYNK-CKQDLEEYMSSTVFP---SLSEKHDEHLL 91
Y+MLY +VY+ C + S + ++ + LE Y+ + V +S + LL
Sbjct: 28 YMMLYDAVYNICTTTTLANSNNNSPEFASEFLYKQLENYIRTYVIAIRDRISACSGDELL 87
Query: 92 RELVKRFANHKVMVKWLALCFNYLERYYIRQRA------LPTISEIGLTCFRDLVFDALK 145
+ + N K + F YL R ++ ++ + I ++ L ++ FD K
Sbjct: 88 GKCTIEWDNFKFSTRICNCIFQYLNRNFVSKKVEDKNGEIVEIYKLALDIWKAEFFDNFK 147
Query: 146 HKAKDVVITLIDREREGEEID 166
K D ++ LI ER G I+
Sbjct: 148 VKTIDAILELILLERCGSTIN 168
>sp|O13790|CUL1_SCHPO Cullin-1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=cul1 PE=1 SV=1
Length = 767
Score = 36.2 bits (82), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/127 (20%), Positives = 57/127 (44%), Gaps = 18/127 (14%)
Query: 8 MDEGWDIIQKWITKL-RRISEGLPEPPFNVDDYVMLYSSVYSTCIQGPH----HGYSAQ- 61
++ WD ++ ++++ R+ EG+ + Y+ LY+++++ C ++ Q
Sbjct: 20 LNGTWDFLKTGVSQIFERLDEGM-----TITKYMELYTAIHNYCADASKTITVDNFNDQT 74
Query: 62 -------LYNKCKQDLEEYMSSTVFPSLSEKHDEHLLRELVKRFANHKVMVKWLALCFNY 114
LYN LEEY++ +S+ + E L K + +++ F Y
Sbjct: 75 ANVLGEALYNNLVLYLEEYLARLRKECISQTNHEEQLAAYAKYWTRFTTSARFINHLFGY 134
Query: 115 LERYYIR 121
L RY+++
Sbjct: 135 LNRYWVK 141
>sp|Q54CS2|CUL4_DICDI Cullin-4 OS=Dictyostelium discoideum GN=culD PE=3 SV=1
Length = 802
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 69/138 (50%), Gaps = 15/138 (10%)
Query: 42 LYSSVYSTCIQGPHHGYSAQLYNKCKQDLEEYMSSTV-FPSLSEKHDEHLLRELV----K 96
LY V + C ++ LYNK +E++++ T+ L+ D + + + K
Sbjct: 94 LYKMVENLCF---DKILASNLYNKISVQIEKHITLTIKHLVLTMSSDPIIFLKSINSIWK 150
Query: 97 RFANHKVMVKWLALCFNYLERYYIRQRA--LPTISEIGLTCFRDLVFDA--LKHKAKDVV 152
N +M++ + F YL+R Y+ Q + + +I ++GL F + + L+ K D +
Sbjct: 151 DHTNQMIMIRSI---FLYLDRTYVIQNSNTVKSIWDLGLFYFGNNLSQQSNLERKTIDSL 207
Query: 153 ITLIDREREGEEIDRALL 170
+ I EREG+EIDR L+
Sbjct: 208 LYSIRCEREGDEIDRDLI 225
>sp|E1JI63|SNMP2_DROME Sensory neuron membrane protein 2 OS=Drosophila melanogaster
GN=Snmp2 PE=2 SV=1
Length = 556
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 5/90 (5%)
Query: 66 CKQDLEEYMSSTVFPSLSEKHDEHLL-----RELVKRFANHKVMVKWLALCFNYLERYYI 120
C L Y +FP++ K E + E KRF N + + FN I
Sbjct: 14 CVAVLGGYCGWILFPNMVHKKVEQSVVIQDGSEQFKRFVNLPQPLNFKVYIFNVTNSDRI 73
Query: 121 RQRALPTISEIGLTCFRDLVFDALKHKAKD 150
+Q A+P + EIG ++ +KH ++D
Sbjct: 74 QQGAIPIVEEIGPYVYKQFRQKKVKHFSRD 103
>sp|Q5JU00|TCTE1_HUMAN T-complex-associated testis-expressed protein 1 OS=Homo sapiens
GN=TCTE1 PE=2 SV=1
Length = 501
Score = 31.2 bits (69), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 84 EKHDEHLLRELVKRFANHKVMVKWLALCFNYLERYYIRQ 122
E+H E+LL+ + + V++ L LC NY+ R ++ Q
Sbjct: 157 ERHLENLLKHFIPGTTDPAVILDLLPLCRNYVRRVHVDQ 195
>sp|Q4R642|TCTE1_MACFA T-complex-associated testis-expressed protein 1 OS=Macaca
fascicularis GN=TCTE1 PE=2 SV=1
Length = 501
Score = 31.2 bits (69), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 84 EKHDEHLLRELVKRFANHKVMVKWLALCFNYLERYYIRQ 122
E+H E+LL+ + + V++ L LC NY+ R ++ Q
Sbjct: 157 ERHLENLLKHFIPGTTDPAVILDLLPLCRNYVRRVHVDQ 195
>sp|P21975|V055_FOWPN Putative Ig-like V-type domain-containing protein FPV055 OS=Fowlpox
virus (strain NVSL) GN=FPV055 PE=4 SV=1
Length = 275
Score = 31.2 bits (69), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Query: 94 LVKRFANHKVMVKWLALCFNYLERYYIRQRALPTI-----SEIGLTCF 136
+ K HK + + LCF YL + ++ +A P + S+I LTCF
Sbjct: 2 ICKNSIRHKELTLIIFLCFIYLSKTFVEVKAPPYVLVPEGSDINLTCF 49
>sp|O90758|V033_FOWPN Soluble NSF attachment protein homolog FPV033 OS=Fowlpox virus
(strain NVSL) GN=SNAP PE=3 SV=1
Length = 287
Score = 30.8 bits (68), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 14/109 (12%)
Query: 42 LYSSVYSTCIQGPHHGYSAQLYNKCKQDLEEYMSSTVFPSLSEKHDEHLLRELVKRFANH 101
+Y S+ + H A++Y C DLE+ + ++ RE + +
Sbjct: 107 VYKSINNFTTAAKHQMTVAEIYESCIMDLEK-------ACMHYEYATEYYREEGSIKSAN 159
Query: 102 KVMVKWLALCFNYLERYYIRQRALPTISEIGLTCFRDLVFDALKHKAKD 150
M+K +A CF ++++ +A +IG+ C R LKH+ KD
Sbjct: 160 DCMIK-VADCFTRMKQF---DKAASVYEQIGIICMR---LPILKHRIKD 201
>sp|A6QLT4|MTM1_BOVIN Myotubularin OS=Bos taurus GN=MTM1 PE=2 SV=2
Length = 603
Score = 30.8 bits (68), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 10/111 (9%)
Query: 2 GHKEIDMDEGWDIIQKWITKLRR---ISEGLPEPPFNVDDYVMLYSSVYSTCIQG-PHHG 57
GH DM ++I+ ++ L I L E FNVD + +Y+ V QG P+H
Sbjct: 127 GHSRRDM---FEILTRYAFPLAHSLPIFAFLNEEKFNVDGWT-VYNPVEEYRRQGLPNHH 182
Query: 58 YSAQLYNKCKQDLEEYMSSTVFPSLSEKHDEHLLRELVKRFANHKVMVKWL 108
+ NKC + + Y + V P + DE L R R N ++ W+
Sbjct: 183 WRITFINKCYKLCDTYPALLVVPYRAS--DEDLRRVATFRSRNRIPVLSWI 231
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.139 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,767,503
Number of Sequences: 539616
Number of extensions: 2627346
Number of successful extensions: 6879
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 6831
Number of HSP's gapped (non-prelim): 45
length of query: 172
length of database: 191,569,459
effective HSP length: 109
effective length of query: 63
effective length of database: 132,751,315
effective search space: 8363332845
effective search space used: 8363332845
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)