Query 048136
Match_columns 559
No_of_seqs 360 out of 1847
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 11:15:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048136.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048136hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1k3i_A Galactose oxidase precu 100.0 5.1E-74 1.7E-78 647.6 40.4 452 28-559 168-655 (656)
2 2xn4_A Kelch-like protein 2; s 100.0 4.5E-35 1.5E-39 297.5 30.5 271 57-413 14-302 (302)
3 1zgk_A Kelch-like ECH-associat 100.0 4.9E-35 1.7E-39 298.6 29.3 277 46-407 13-308 (308)
4 3ii7_A Kelch-like protein 7; p 100.0 7.4E-34 2.5E-38 289.0 27.7 251 102-409 26-295 (306)
5 2vpj_A Kelch-like protein 12; 100.0 1.5E-33 5.2E-38 285.8 28.2 250 101-407 32-299 (301)
6 1zgk_A Kelch-like ECH-associat 100.0 8.6E-32 3E-36 274.6 30.5 257 122-445 15-289 (308)
7 2woz_A Kelch repeat and BTB do 100.0 1.8E-32 6.3E-37 280.7 24.3 263 102-417 26-314 (318)
8 4asc_A Kelch repeat and BTB do 100.0 1.5E-32 5E-37 281.0 21.9 262 102-419 15-306 (315)
9 2xn4_A Kelch-like protein 2; s 100.0 1.5E-31 5E-36 271.6 28.3 252 129-445 13-278 (302)
10 3ii7_A Kelch-like protein 7; p 100.0 2.6E-31 8.8E-36 270.2 27.7 251 131-445 11-274 (306)
11 2vpj_A Kelch-like protein 12; 100.0 1.6E-30 5.4E-35 263.6 29.6 251 130-444 13-279 (301)
12 2uvk_A YJHT; unknown function, 100.0 1.3E-30 4.6E-35 270.8 23.9 260 114-421 2-327 (357)
13 1k3i_A Galactose oxidase precu 100.0 8.5E-30 2.9E-34 286.9 23.1 299 102-444 168-498 (656)
14 2uvk_A YJHT; unknown function, 100.0 4.9E-29 1.7E-33 259.0 25.7 285 40-396 2-352 (357)
15 4asc_A Kelch repeat and BTB do 100.0 2.6E-29 9E-34 256.8 21.8 250 131-445 4-279 (315)
16 2woz_A Kelch repeat and BTB do 100.0 9.2E-29 3.2E-33 253.1 23.2 250 131-445 15-289 (318)
17 2zwa_A Leucine carboxyl methyl 99.9 1.3E-25 4.5E-30 254.3 26.4 260 112-420 379-675 (695)
18 2zwa_A Leucine carboxyl methyl 99.9 2E-24 6.7E-29 244.7 23.5 257 36-360 377-675 (695)
19 3ow8_A WD repeat-containing pr 98.1 0.0022 7.5E-08 64.4 27.9 244 102-420 60-311 (321)
20 4ery_A WD repeat-containing pr 98.1 0.0047 1.6E-07 60.9 30.0 247 102-419 47-299 (312)
21 1k8k_C P40, ARP2/3 complex 41 98.1 0.0014 4.7E-08 66.0 25.4 136 102-249 32-172 (372)
22 3dsm_A Uncharacterized protein 98.0 0.0042 1.4E-07 62.6 27.3 269 101-442 18-301 (328)
23 1gxr_A ESG1, transducin-like e 97.9 0.005 1.7E-07 60.5 26.4 245 102-420 74-327 (337)
24 1got_B GT-beta; complex (GTP-b 97.9 0.0033 1.1E-07 63.3 25.1 247 102-420 79-333 (340)
25 3vgz_A Uncharacterized protein 97.8 0.022 7.7E-07 56.5 29.6 249 101-419 70-334 (353)
26 3no2_A Uncharacterized protein 97.8 0.0021 7.1E-08 63.6 21.2 217 131-417 4-230 (276)
27 3hfq_A Uncharacterized protein 97.8 0.0015 5.1E-08 65.7 20.4 149 101-254 19-176 (347)
28 2ynn_A Coatomer subunit beta'; 97.8 0.0041 1.4E-07 61.6 23.3 246 102-418 37-291 (304)
29 1vyh_C Platelet-activating fac 97.8 0.0045 1.6E-07 64.3 24.6 254 102-420 132-401 (410)
30 3zwl_B Eukaryotic translation 97.7 0.012 4.1E-07 58.5 26.0 270 102-420 56-336 (369)
31 4e54_B DNA damage-binding prot 97.7 0.0084 2.9E-07 62.6 25.5 135 102-252 144-284 (435)
32 2pbi_B Guanine nucleotide-bind 97.7 0.011 3.9E-07 59.9 25.6 229 128-420 72-305 (354)
33 1got_B GT-beta; complex (GTP-b 97.7 0.0091 3.1E-07 60.1 24.4 224 128-420 63-291 (340)
34 2pbi_B Guanine nucleotide-bind 97.7 0.019 6.5E-07 58.2 26.7 249 102-420 88-347 (354)
35 3bws_A Protein LP49; two-domai 97.6 0.012 4E-07 60.7 24.3 253 102-419 146-420 (433)
36 3no2_A Uncharacterized protein 97.6 0.0068 2.3E-07 59.8 21.1 203 102-357 17-230 (276)
37 3vl1_A 26S proteasome regulato 97.6 0.039 1.3E-06 56.4 27.6 87 102-196 121-208 (420)
38 1l0q_A Surface layer protein; 97.5 0.024 8.3E-07 57.4 25.2 244 102-419 14-264 (391)
39 4aez_A CDC20, WD repeat-contai 97.5 0.0087 3E-07 61.6 22.0 248 102-420 115-370 (401)
40 2z2n_A Virginiamycin B lyase; 97.5 0.074 2.5E-06 51.2 29.3 240 102-418 38-284 (299)
41 3q7m_A Lipoprotein YFGL, BAMB; 97.5 0.074 2.5E-06 53.9 28.3 241 102-418 115-367 (376)
42 3u4y_A Uncharacterized protein 97.5 0.051 1.7E-06 53.6 26.3 130 102-251 22-161 (331)
43 2ymu_A WD-40 repeat protein; u 97.5 0.03 1E-06 60.0 25.6 241 102-420 327-570 (577)
44 3iz6_a 40S ribosomal protein R 97.4 0.024 8.1E-07 58.0 23.6 235 127-420 73-319 (380)
45 4ery_A WD repeat-containing pr 97.4 0.043 1.5E-06 53.9 24.2 223 127-421 30-259 (312)
46 3dwl_C Actin-related protein 2 97.4 0.0043 1.5E-07 62.7 17.0 138 102-251 35-178 (377)
47 1erj_A Transcriptional repress 97.4 0.038 1.3E-06 56.7 24.4 110 126-255 129-243 (393)
48 3ow8_A WD repeat-containing pr 97.4 0.063 2.2E-06 53.5 25.2 135 102-255 104-242 (321)
49 3fm0_A Protein CIAO1; WDR39,SG 97.4 0.0099 3.4E-07 60.0 19.3 139 102-254 40-185 (345)
50 1gxr_A ESG1, transducin-like e 97.3 0.033 1.1E-06 54.6 22.4 223 126-420 57-286 (337)
51 2qc5_A Streptogramin B lactona 97.3 0.14 4.8E-06 49.2 27.0 240 102-418 43-290 (300)
52 2hes_X YDR267CP; beta-propelle 97.3 0.012 4.2E-07 58.9 18.8 260 102-420 36-318 (330)
53 1rwi_B Serine/threonine-protei 97.3 0.1 3.5E-06 49.7 24.8 217 127-419 30-253 (270)
54 3vl1_A 26S proteasome regulato 97.3 0.019 6.6E-07 58.7 20.7 262 102-420 80-355 (420)
55 2ovr_B FBW7, F-BOX/WD repeat p 97.3 0.11 3.7E-06 53.9 26.4 242 102-421 181-429 (445)
56 3iz6_a 40S ribosomal protein R 97.3 0.094 3.2E-06 53.4 25.5 255 102-421 90-366 (380)
57 3ei3_B DNA damage-binding prot 97.2 0.048 1.6E-06 55.1 23.0 133 102-250 98-236 (383)
58 2ynn_A Coatomer subunit beta'; 97.2 0.013 4.5E-07 57.9 18.2 222 128-421 21-250 (304)
59 3jrp_A Fusion protein of prote 97.2 0.018 6.1E-07 57.6 19.4 239 128-420 19-277 (379)
60 3dm0_A Maltose-binding peripla 97.2 0.057 1.9E-06 59.9 25.2 226 125-421 435-684 (694)
61 2aq5_A Coronin-1A; WD40 repeat 97.2 0.024 8.1E-07 58.1 20.5 233 126-419 87-333 (402)
62 3mkq_A Coatomer beta'-subunit; 97.2 0.033 1.1E-06 62.5 23.4 133 102-252 37-174 (814)
63 1r5m_A SIR4-interacting protei 97.1 0.091 3.1E-06 53.1 23.9 63 126-196 114-176 (425)
64 2pm9_A Protein WEB1, protein t 97.1 0.14 4.9E-06 51.8 24.5 264 102-420 47-327 (416)
65 1p22_A F-BOX/WD-repeat protein 97.1 0.11 3.8E-06 53.8 23.9 133 102-255 155-290 (435)
66 3dwl_C Actin-related protein 2 97.0 0.0048 1.6E-07 62.4 13.0 112 127-252 18-133 (377)
67 1r5m_A SIR4-interacting protei 97.0 0.042 1.4E-06 55.7 20.1 132 102-252 132-280 (425)
68 1nr0_A Actin interacting prote 97.0 0.13 4.6E-06 56.1 25.5 138 102-254 172-317 (611)
69 2ymu_A WD-40 repeat protein; u 97.0 0.19 6.6E-06 53.6 26.3 242 102-420 286-529 (577)
70 3scy_A Hypothetical bacterial 97.0 0.16 5.4E-06 50.9 23.8 92 102-196 31-125 (361)
71 4gga_A P55CDC, cell division c 97.0 0.068 2.3E-06 55.2 21.5 133 101-252 126-263 (420)
72 1ri6_A Putative isomerase YBHE 97.0 0.073 2.5E-06 52.2 20.8 140 102-254 17-165 (343)
73 3jrp_A Fusion protein of prote 97.0 0.042 1.4E-06 54.8 19.1 231 102-394 35-296 (379)
74 1vyh_C Platelet-activating fac 96.9 0.099 3.4E-06 54.0 22.2 111 126-255 114-228 (410)
75 4g56_B MGC81050 protein; prote 96.9 0.18 6E-06 51.0 23.6 227 126-421 100-334 (357)
76 3u4y_A Uncharacterized protein 96.9 0.24 8.1E-06 48.6 24.0 139 102-253 64-210 (331)
77 3hfq_A Uncharacterized protein 96.9 0.049 1.7E-06 54.3 19.1 141 102-254 65-224 (347)
78 2pm9_A Protein WEB1, protein t 96.9 0.2 6.7E-06 50.8 24.0 139 102-251 91-250 (416)
79 2pm7_B Protein transport prote 96.9 0.21 7.2E-06 48.8 23.4 235 102-395 33-295 (297)
80 1q7f_A NHL, brain tumor CG1071 96.9 0.2 6.8E-06 48.3 22.8 219 128-417 37-268 (286)
81 3jro_A Fusion protein of prote 96.9 0.018 6.2E-07 65.0 17.2 240 129-421 18-276 (753)
82 1pgu_A Actin interacting prote 96.9 0.21 7.2E-06 53.4 25.1 250 102-421 41-319 (615)
83 1k8k_C P40, ARP2/3 complex 41 96.9 0.041 1.4E-06 54.9 18.0 111 127-252 15-129 (372)
84 3sfz_A APAF-1, apoptotic pepti 96.8 0.24 8.2E-06 58.6 27.2 254 102-421 639-904 (1249)
85 3sfz_A APAF-1, apoptotic pepti 96.8 0.062 2.1E-06 63.7 22.1 246 102-421 985-1240(1249)
86 3dsm_A Uncharacterized protein 96.8 0.12 3.9E-06 51.9 21.1 216 144-417 16-243 (328)
87 3v7d_B Cell division control p 96.8 0.24 8.1E-06 51.4 24.0 247 102-418 144-410 (464)
88 3vgz_A Uncharacterized protein 96.8 0.22 7.6E-06 49.0 22.7 107 144-258 68-181 (353)
89 3v7d_B Cell division control p 96.8 0.43 1.5E-05 49.3 25.8 214 102-384 185-422 (464)
90 2xzm_R RACK1; ribosome, transl 96.8 0.5 1.7E-05 47.0 25.7 63 126-196 82-145 (343)
91 4aow_A Guanine nucleotide-bind 96.8 0.25 8.4E-06 48.4 22.7 88 102-196 63-155 (340)
92 1ri6_A Putative isomerase YBHE 96.8 0.25 8.4E-06 48.3 22.5 135 102-249 62-208 (343)
93 3odt_A Protein DOA1; ubiquitin 96.8 0.43 1.5E-05 45.8 25.2 89 102-196 41-129 (313)
94 3mmy_A MRNA export factor; mRN 96.8 0.27 9.2E-06 48.4 22.9 87 102-196 66-156 (368)
95 1l0q_A Surface layer protein; 96.8 0.34 1.2E-05 48.7 24.1 133 102-255 56-194 (391)
96 3i2n_A WD repeat-containing pr 96.7 0.1 3.5E-06 51.5 19.5 141 102-254 46-203 (357)
97 4gqb_B Methylosome protein 50; 96.7 0.15 5E-06 51.6 20.8 226 127-421 89-322 (344)
98 3scy_A Hypothetical bacterial 96.7 0.26 8.8E-06 49.3 22.3 28 227-254 216-246 (361)
99 2ovr_B FBW7, F-BOX/WD repeat p 96.7 0.33 1.1E-05 50.2 23.8 238 102-420 141-381 (445)
100 1rwi_B Serine/threonine-protei 96.6 0.47 1.6E-05 44.9 25.5 133 102-254 48-184 (270)
101 2pm7_B Protein transport prote 96.6 0.25 8.4E-06 48.3 21.1 238 128-420 17-275 (297)
102 4a11_B DNA excision repair pro 96.6 0.081 2.8E-06 53.3 17.8 133 104-253 27-178 (408)
103 1nr0_A Actin interacting prote 96.6 0.91 3.1E-05 49.4 27.4 255 102-421 83-346 (611)
104 3mkq_A Coatomer beta'-subunit; 96.5 0.22 7.6E-06 55.7 22.5 223 127-421 20-250 (814)
105 3jro_A Fusion protein of prote 96.5 0.086 2.9E-06 59.4 19.0 232 102-395 33-295 (753)
106 4aez_A CDC20, WD repeat-contai 96.5 0.93 3.2E-05 46.1 25.7 214 101-384 157-381 (401)
107 3fm0_A Protein CIAO1; WDR39,SG 96.5 0.044 1.5E-06 55.1 14.9 190 173-421 21-216 (345)
108 4h5i_A Guanine nucleotide-exch 96.4 0.61 2.1E-05 47.2 23.5 232 128-420 79-333 (365)
109 3bws_A Protein LP49; two-domai 96.4 0.31 1E-05 49.8 21.3 138 101-257 192-341 (433)
110 1nir_A Nitrite reductase; hemo 96.4 0.097 3.3E-06 56.8 18.0 277 102-445 161-460 (543)
111 1erj_A Transcriptional repress 96.3 0.88 3E-05 46.3 24.2 137 102-251 147-288 (393)
112 3zwl_B Eukaryotic translation 96.3 0.075 2.6E-06 52.6 15.5 228 127-421 39-281 (369)
113 3bg1_A Protein SEC13 homolog; 96.3 0.16 5.4E-06 50.3 17.9 111 129-254 22-141 (316)
114 4ggc_A P55CDC, cell division c 96.3 0.49 1.7E-05 45.6 21.2 132 102-252 47-183 (318)
115 3q7m_A Lipoprotein YFGL, BAMB; 96.3 1.1 3.7E-05 45.1 25.8 242 102-417 65-325 (376)
116 1sq9_A Antiviral protein SKI8; 96.3 0.27 9.2E-06 49.5 19.7 144 102-257 38-223 (397)
117 3v9f_A Two-component system se 96.3 2 7E-05 48.1 34.6 254 102-419 385-647 (781)
118 4g56_B MGC81050 protein; prote 96.3 0.23 7.8E-06 50.2 19.2 122 125-257 47-177 (357)
119 3frx_A Guanine nucleotide-bind 96.2 0.55 1.9E-05 46.3 21.3 63 126-196 71-134 (319)
120 3k26_A Polycomb protein EED; W 96.1 0.3 1E-05 48.1 18.9 90 102-196 97-188 (366)
121 4e54_B DNA damage-binding prot 96.1 0.56 1.9E-05 48.4 21.6 132 102-252 189-329 (435)
122 3fvz_A Peptidyl-glycine alpha- 96.1 1.2 4.3E-05 44.0 26.0 149 101-257 70-234 (329)
123 1jmx_B Amine dehydrogenase; ox 96.1 0.36 1.2E-05 47.3 19.2 141 102-257 23-182 (349)
124 2ojh_A Uncharacterized protein 96.1 0.46 1.6E-05 44.8 19.3 88 102-196 24-113 (297)
125 3k26_A Polycomb protein EED; W 96.1 0.1 3.4E-06 51.6 14.9 135 102-252 46-194 (366)
126 3ei3_B DNA damage-binding prot 96.0 1 3.5E-05 45.1 22.5 112 126-252 79-196 (383)
127 1q7f_A NHL, brain tumor CG1071 95.9 1.2 4.2E-05 42.5 25.9 108 130-254 87-198 (286)
128 1nir_A Nitrite reductase; hemo 95.9 0.53 1.8E-05 50.8 20.6 109 128-257 145-264 (543)
129 3mbr_X Glutamine cyclotransfer 95.8 0.41 1.4E-05 46.2 17.3 113 126-257 25-140 (243)
130 2dg1_A DRP35, lactonase; beta 95.8 1.1 3.8E-05 43.9 21.3 113 126-254 50-175 (333)
131 2z2n_A Virginiamycin B lyase; 95.7 1.5 5E-05 41.8 26.6 131 102-254 80-216 (299)
132 3fvz_A Peptidyl-glycine alpha- 95.7 1.8 6.1E-05 42.8 28.5 242 126-419 29-311 (329)
133 1yfq_A Cell cycle arrest prote 95.7 1.7 5.7E-05 42.3 23.7 87 102-196 35-127 (342)
134 3bg1_A Protein SEC13 homolog; 95.7 0.28 9.5E-06 48.4 16.3 89 102-196 37-132 (316)
135 3frx_A Guanine nucleotide-bind 95.7 1.8 6E-05 42.5 22.1 135 102-255 89-232 (319)
136 3odt_A Protein DOA1; ubiquitin 95.7 1.5 5.2E-05 41.9 21.2 60 130-196 27-86 (313)
137 1pgu_A Actin interacting prote 95.6 0.76 2.6E-05 49.0 20.6 68 122-196 20-93 (615)
138 3lrv_A PRE-mRNA-splicing facto 95.5 1.3 4.3E-05 43.9 20.5 111 127-252 132-246 (343)
139 4d9s_A UVB-resistance protein 95.4 0.59 2E-05 48.5 18.3 72 342-422 287-359 (406)
140 1sq9_A Antiviral protein SKI8; 95.4 0.95 3.3E-05 45.3 19.4 142 102-257 93-274 (397)
141 2iwa_A Glutamine cyclotransfer 95.4 0.76 2.6E-05 45.0 17.7 189 172-421 24-228 (266)
142 2aq5_A Coronin-1A; WD40 repeat 95.3 1.5 5.3E-05 44.3 20.8 233 130-419 44-288 (402)
143 1p22_A F-BOX/WD-repeat protein 95.3 1.1 3.8E-05 46.0 19.9 133 102-255 195-330 (435)
144 3mbr_X Glutamine cyclotransfer 95.3 1.4 4.7E-05 42.5 18.9 185 173-419 25-224 (243)
145 2xbg_A YCF48-like protein; pho 95.3 2.6 9E-05 41.9 23.7 238 110-419 25-269 (327)
146 4gga_A P55CDC, cell division c 95.3 1.9 6.4E-05 44.1 21.4 215 102-383 171-395 (420)
147 4h5i_A Guanine nucleotide-exch 95.2 0.68 2.3E-05 46.8 17.7 193 127-384 140-344 (365)
148 4aow_A Guanine nucleotide-bind 95.2 1.8 6.1E-05 42.0 20.3 222 128-418 46-275 (340)
149 1pjx_A Dfpase, DIISOPROPYLFLUO 95.2 2.4 8.2E-05 40.8 21.4 65 128-198 25-100 (314)
150 3nol_A Glutamine cyclotransfer 95.1 0.82 2.8E-05 44.6 16.8 70 178-258 51-124 (262)
151 3dm0_A Maltose-binding peripla 94.9 2.4 8.2E-05 46.6 22.4 137 102-254 454-596 (694)
152 2hqs_A Protein TOLB; TOLB, PAL 94.9 2.5 8.5E-05 43.5 21.2 59 345-420 316-374 (415)
153 3f3f_A Nucleoporin SEH1; struc 94.8 2.9 0.0001 40.0 21.2 60 131-196 70-139 (351)
154 1jmx_B Amine dehydrogenase; ox 94.8 1.3 4.3E-05 43.3 17.9 64 128-199 7-74 (349)
155 3i2n_A WD repeat-containing pr 94.8 0.46 1.6E-05 46.7 14.7 113 128-252 26-150 (357)
156 3nol_A Glutamine cyclotransfer 94.7 0.84 2.9E-05 44.5 15.6 116 121-257 43-162 (262)
157 3gre_A Serine/threonine-protei 94.6 0.52 1.8E-05 48.3 14.8 66 125-196 68-138 (437)
158 4gqb_B Methylosome protein 50; 94.5 1.2 4E-05 44.8 16.9 133 102-252 105-248 (344)
159 1pby_B Quinohemoprotein amine 94.5 3.7 0.00013 39.5 22.0 139 102-257 13-170 (337)
160 3mmy_A MRNA export factor; mRN 94.3 0.82 2.8E-05 44.8 15.1 108 127-252 46-162 (368)
161 3dw8_B Serine/threonine-protei 94.2 5.3 0.00018 40.4 23.3 72 172-252 181-260 (447)
162 3nok_A Glutaminyl cyclase; bet 94.2 3.1 0.00011 40.6 18.4 69 177-258 62-133 (268)
163 1yfq_A Cell cycle arrest prote 94.1 3.5 0.00012 40.0 19.2 65 127-196 18-84 (342)
164 2xyi_A Probable histone-bindin 93.8 4.7 0.00016 41.3 20.4 116 126-251 134-264 (430)
165 3hrp_A Uncharacterized protein 93.8 7 0.00024 40.2 23.3 111 127-254 137-253 (409)
166 3e5z_A Putative gluconolactona 93.5 5.4 0.00019 38.2 21.8 67 125-200 32-100 (296)
167 2xbg_A YCF48-like protein; pho 93.5 6.6 0.00022 38.9 25.4 215 131-418 89-311 (327)
168 3mvd_K Regulator of chromosome 93.4 4.6 0.00016 41.7 19.5 73 342-422 304-376 (423)
169 2xzm_R RACK1; ribosome, transl 93.4 6.5 0.00022 38.7 21.3 133 102-250 100-244 (343)
170 2qc5_A Streptogramin B lactona 93.4 5.5 0.00019 37.7 25.1 217 127-418 26-248 (300)
171 3f3f_A Nucleoporin SEH1; struc 93.1 6.4 0.00022 37.6 20.7 114 128-252 19-145 (351)
172 4a11_B DNA excision repair pro 92.8 8 0.00027 38.2 24.0 106 127-251 106-219 (408)
173 3dw8_B Serine/threonine-protei 92.6 9.7 0.00033 38.4 20.8 24 127-153 35-58 (447)
174 1jof_A Carboxy-CIS,CIS-muconat 92.3 4 0.00014 40.8 16.7 47 102-152 18-67 (365)
175 3lrv_A PRE-mRNA-splicing facto 92.3 5.2 0.00018 39.3 17.4 139 102-254 151-298 (343)
176 2dg1_A DRP35, lactonase; beta 92.1 5.4 0.00018 38.8 17.0 84 102-187 68-153 (333)
177 3vu4_A KMHSV2; beta-propeller 92.0 10 0.00036 37.5 22.7 63 345-420 246-326 (355)
178 4a2l_A BT_4663, two-component 91.8 19 0.00066 40.1 33.6 252 102-419 379-650 (795)
179 2ecf_A Dipeptidyl peptidase IV 91.4 7 0.00024 42.9 18.7 115 127-254 43-185 (741)
180 2hqs_A Protein TOLB; TOLB, PAL 91.3 8.4 0.00029 39.4 18.1 136 102-254 205-348 (415)
181 2iwa_A Glutamine cyclotransfer 90.6 3.8 0.00013 39.9 13.8 103 229-384 28-136 (266)
182 2hes_X YDR267CP; beta-propelle 90.5 3.6 0.00012 40.5 13.9 99 289-421 118-221 (330)
183 1pjx_A Dfpase, DIISOPROPYLFLUO 89.7 14 0.00049 35.1 21.6 81 102-188 48-136 (314)
184 1pby_B Quinohemoprotein amine 89.2 11 0.00037 36.1 16.0 112 133-257 2-131 (337)
185 2fp8_A Strictosidine synthase; 89.0 18 0.0006 35.2 18.8 67 345-418 234-301 (322)
186 3e5z_A Putative gluconolactona 88.6 12 0.00043 35.5 16.0 135 102-252 92-248 (296)
187 2vdu_B TRNA (guanine-N(7)-)-me 88.0 25 0.00086 35.8 25.2 140 102-257 127-278 (450)
188 2ecf_A Dipeptidyl peptidase IV 87.4 37 0.0013 37.0 26.6 79 101-187 65-170 (741)
189 3nok_A Glutaminyl cyclase; bet 87.3 11 0.00038 36.7 14.2 138 102-257 77-217 (268)
190 2ojh_A Uncharacterized protein 86.4 20 0.00069 33.0 21.1 107 131-254 9-123 (297)
191 3hrp_A Uncharacterized protein 86.4 31 0.0011 35.2 24.7 135 102-251 154-299 (409)
192 2xyi_A Probable histone-bindin 85.7 33 0.0011 34.8 20.2 112 126-250 187-309 (430)
193 4ggc_A P55CDC, cell division c 85.0 26 0.00088 33.0 22.0 88 101-196 90-177 (318)
194 3g4e_A Regucalcin; six bladed 84.7 14 0.00049 35.5 13.9 143 102-257 75-236 (297)
195 2bkl_A Prolyl endopeptidase; m 84.5 51 0.0017 36.0 20.2 95 101-196 148-255 (695)
196 2vdu_B TRNA (guanine-N(7)-)-me 83.8 36 0.0012 34.5 17.4 90 102-196 222-335 (450)
197 1qks_A Cytochrome CD1 nitrite 83.6 52 0.0018 35.4 19.5 109 130-257 165-282 (567)
198 4d9s_A UVB-resistance protein 81.6 8.7 0.0003 39.4 11.4 73 342-422 235-307 (406)
199 3pe7_A Oligogalacturonate lyas 80.9 44 0.0015 32.7 21.8 54 102-159 62-115 (388)
200 2p9w_A MAL S 1 allergenic prot 80.9 22 0.00076 35.7 13.6 92 316-419 99-204 (334)
201 3kci_A Probable E3 ubiquitin-p 80.7 11 0.00039 38.3 11.9 73 342-422 275-347 (389)
202 2oaj_A Protein SNI1; WD40 repe 79.6 38 0.0013 38.6 16.9 106 127-253 24-132 (902)
203 3v9f_A Two-component system se 79.3 82 0.0028 34.8 21.1 136 102-254 471-615 (781)
204 3g4e_A Regucalcin; six bladed 78.1 49 0.0017 31.5 20.5 59 131-200 24-83 (297)
205 3a72_A EXO-arabinanase; arabin 77.7 12 0.00042 37.8 10.8 88 320-416 117-221 (355)
206 4hw6_A Hypothetical protein, I 77.3 70 0.0024 32.9 19.5 102 132-253 153-262 (433)
207 2p4o_A Hypothetical protein; p 76.0 57 0.002 31.3 23.1 107 126-251 37-148 (306)
208 3dr2_A Exported gluconolactona 75.0 34 0.0011 32.8 12.9 137 102-253 109-270 (305)
209 1qks_A Cytochrome CD1 nitrite 74.6 78 0.0027 33.9 16.8 88 102-196 179-271 (567)
210 2z3z_A Dipeptidyl aminopeptida 74.4 99 0.0034 33.3 21.6 88 101-189 142-278 (706)
211 2fp8_A Strictosidine synthase; 73.7 66 0.0023 30.9 18.1 135 102-252 103-271 (322)
212 1k32_A Tricorn protease; prote 72.7 1.4E+02 0.0048 34.2 21.8 108 127-254 344-465 (1045)
213 3mvd_K Regulator of chromosome 71.4 92 0.0031 31.6 16.8 65 349-422 260-324 (423)
214 3hxj_A Pyrrolo-quinoline quino 69.5 77 0.0026 30.0 19.3 122 102-249 42-165 (330)
215 3sjl_D Methylamine dehydrogena 68.4 1.1E+02 0.0037 31.2 17.3 55 100-157 109-171 (386)
216 2oaj_A Protein SNI1; WD40 repe 68.0 1.7E+02 0.0057 33.2 19.2 69 173-255 22-93 (902)
217 3vu4_A KMHSV2; beta-propeller 64.1 72 0.0025 31.2 12.9 49 102-153 220-270 (355)
218 3dr2_A Exported gluconolactona 64.1 93 0.0032 29.6 13.4 67 345-418 136-207 (305)
219 1xfd_A DIP, dipeptidyl aminope 63.6 1.6E+02 0.0056 31.5 18.1 85 102-188 39-133 (723)
220 3tc9_A Hypothetical hydrolase; 63.5 74 0.0025 32.6 13.2 130 232-418 149-289 (430)
221 2w18_A PALB2, fancn, partner a 61.2 97 0.0033 31.3 13.0 42 375-421 306-348 (356)
222 2j04_A TAU60, YPL007P, hypothe 59.9 1.1E+02 0.0037 33.2 13.8 113 124-253 133-257 (588)
223 1kv9_A Type II quinohemoprotei 59.2 2E+02 0.0069 31.2 23.5 79 102-186 78-169 (668)
224 1w8o_A Bacterial sialidase; 3D 55.8 17 0.00058 39.3 6.8 129 383-544 305-438 (601)
225 3kci_A Probable E3 ubiquitin-p 54.0 44 0.0015 33.7 9.4 18 170-187 222-239 (389)
226 1npe_A Nidogen, entactin; glyc 52.8 1.4E+02 0.0049 27.5 18.5 138 102-258 103-246 (267)
227 3pe7_A Oligogalacturonate lyas 52.8 1.7E+02 0.0057 28.3 18.9 60 126-188 41-100 (388)
228 2z3z_A Dipeptidyl aminopeptida 52.7 2.4E+02 0.0083 30.1 25.9 79 102-187 103-199 (706)
229 2p4o_A Hypothetical protein; p 51.1 81 0.0028 30.2 10.4 102 47-185 32-133 (306)
230 3azo_A Aminopeptidase; POP fam 49.8 1.1E+02 0.0037 32.7 12.1 92 101-196 218-319 (662)
231 3gre_A Serine/threonine-protei 49.5 47 0.0016 33.2 8.7 89 102-196 194-288 (437)
232 4hw6_A Hypothetical protein, I 49.4 2E+02 0.0067 29.4 13.6 23 233-255 153-176 (433)
233 3hxj_A Pyrrolo-quinoline quino 48.9 1.7E+02 0.0059 27.4 20.1 102 130-254 106-209 (330)
234 3c5m_A Oligogalacturonate lyas 48.0 1.6E+02 0.0056 28.3 12.4 56 102-161 266-335 (396)
235 4a2l_A BT_4663, two-component 46.6 3.3E+02 0.011 29.9 30.0 140 102-255 237-391 (795)
236 2ad6_A Methanol dehydrogenase 46.5 1.1E+02 0.0039 32.6 11.5 123 230-391 60-192 (571)
237 3ott_A Two-component system se 43.8 3.5E+02 0.012 29.4 16.6 126 102-250 495-626 (758)
238 2ghs_A AGR_C_1268P; regucalcin 42.8 1.6E+02 0.0055 28.3 11.2 75 102-185 73-150 (326)
239 1flg_A Protein (quinoprotein e 42.5 2.1E+02 0.0072 30.5 12.9 29 229-257 65-96 (582)
240 3azo_A Aminopeptidase; POP fam 39.6 2.4E+02 0.0082 29.8 12.9 90 101-196 266-363 (662)
241 3ott_A Two-component system se 37.1 4.4E+02 0.015 28.6 24.3 131 231-419 481-617 (758)
242 1k32_A Tricorn protease; prote 35.4 2.3E+02 0.0079 32.4 12.5 83 102-188 402-491 (1045)
243 3o4h_A Acylamino-acid-releasin 33.9 1.1E+02 0.0038 32.1 8.9 137 102-254 134-278 (582)
244 3das_A Putative oxidoreductase 33.2 3.7E+02 0.013 26.6 12.4 29 36-66 22-50 (347)
245 1kv9_A Type II quinohemoprotei 33.0 73 0.0025 34.9 7.4 97 288-418 65-170 (668)
246 2ghs_A AGR_C_1268P; regucalcin 32.2 2E+02 0.0067 27.6 9.8 54 346-417 96-151 (326)
247 1yiq_A Quinohemoprotein alcoho 32.0 87 0.003 34.4 7.8 98 288-418 69-175 (689)
248 1tl2_A L10, protein (tachylect 31.6 1E+02 0.0034 29.2 6.9 102 126-239 93-199 (236)
249 1kb0_A Quinohemoprotein alcoho 31.3 5.3E+02 0.018 27.9 26.2 81 102-187 89-182 (677)
250 3sjl_D Methylamine dehydrogena 31.3 4E+02 0.014 26.9 12.2 135 242-420 60-208 (386)
251 2ad6_A Methanol dehydrogenase 31.0 1E+02 0.0036 32.9 8.1 97 289-418 62-168 (571)
252 3tc9_A Hypothetical hydrolase; 30.0 2.6E+02 0.009 28.3 10.7 59 123-186 228-288 (430)
253 2vov_A MOPE, surface-associate 29.6 56 0.0019 29.7 4.6 33 520-558 278-331 (336)
254 1kb0_A Quinohemoprotein alcoho 27.2 1E+02 0.0034 33.8 7.2 99 288-419 76-183 (677)
255 2jkb_A Sialidase B; intramolec 25.9 6.8E+02 0.023 27.3 14.3 39 379-417 617-657 (686)
256 3c75_H MADH, methylamine dehyd 25.6 2.9E+02 0.0097 28.3 9.9 131 233-416 85-244 (426)
257 3o4h_A Acylamino-acid-releasin 25.2 76 0.0026 33.4 5.7 88 102-196 177-272 (582)
258 1flg_A Protein (quinoprotein e 24.3 2.2E+02 0.0077 30.3 9.2 76 100-185 466-545 (582)
259 2j04_A TAU60, YPL007P, hypothe 23.6 7E+02 0.024 26.7 14.0 124 102-248 153-295 (588)
260 1w6s_A Methanol dehydrogenase 23.1 2.3E+02 0.0078 30.5 9.0 76 100-185 453-532 (599)
261 1tl2_A L10, protein (tachylect 22.6 2.1E+02 0.0071 27.0 7.3 100 127-240 47-153 (236)
262 2oiz_A Aromatic amine dehydrog 21.5 1.7E+02 0.0059 28.7 7.2 73 101-181 287-360 (361)
263 1jof_A Carboxy-CIS,CIS-muconat 21.3 4.6E+02 0.016 25.2 10.3 54 102-158 169-229 (365)
264 3c5m_A Oligogalacturonate lyas 20.9 1.1E+02 0.0037 29.6 5.5 80 102-187 218-301 (396)
265 2xdw_A Prolyl endopeptidase; a 20.7 7.9E+02 0.027 26.2 22.5 282 32-398 104-428 (710)
No 1
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=100.00 E-value=5.1e-74 Score=647.61 Aligned_cols=452 Identities=22% Similarity=0.322 Sum_probs=352.9
Q ss_pred CCCCCCCCCcEEecCCCCCcceeEEEeecCCCeEEEEecccccccCCCCCCCCCCCCccccccccccCCccceeeEEEeC
Q 048136 28 DDPAPYFLGKWELLPNNPGISAMHSVLLPNVDEMVIFDATVWQISRLPLPDYKRPCPMHQNKATNVTNIDCWCHSVFYNV 107 (559)
Q Consensus 28 ~~~~~~~~g~W~~~~~~~~~~~~h~~~~~~~gkv~~~gg~~~~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yDp 107 (559)
.+.+++..++|+.+.+++ ....|+++++.+||||++||.+... +. +. ......+.+||+
T Consensus 168 ~~~~dp~~~~W~~~~~~P-~~~~~~av~~~~g~l~v~GG~~~~~--~~-----~~-------------~~~~~~~~~yd~ 226 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDLP-IVPAAAAIEPTSGRVLMWSSYRNDA--FG-----GS-------------PGGITLTSSWDP 226 (656)
T ss_dssp CCCCCTTSCEEEEEEECS-SCCSEEEEETTTTEEEEEEECCCTT--TC-----SC-------------CCSEEEEEEECT
T ss_pred cccCCCCCCeeeeeccCC-CCceeEEEEecCCEEEEEecccccc--cc-----cC-------------CCCeEEEEEEeC
Confidence 445677899999988875 4677888883399999999975210 00 00 011245789999
Q ss_pred CCCCEEeCccC---CCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCcEEE
Q 048136 108 NTLQVTPLKVI---TDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGSFLI 184 (559)
Q Consensus 108 ~t~~w~~~~~~---~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~Vyv 184 (559)
.+++|++++.+ +..+|++.+++.||+||++||..+ .++++|||. +++|+++++ |+.+||+|++++++||+|||
T Consensus 227 ~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~--~~v~~yd~~-t~~W~~~~~-~~~~R~~~s~~~~~dg~iyv 302 (656)
T 1k3i_A 227 STGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDA--KKTSLYDSS-SDSWIPGPD-MQVARGYQSSATMSDGRVFT 302 (656)
T ss_dssp TTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSST--TCEEEEEGG-GTEEEECCC-CSSCCSSCEEEECTTSCEEE
T ss_pred CCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCC--CceEEecCc-CCceeECCC-CCccccccceEEecCCeEEE
Confidence 99999998766 456788788889999999999743 489999999 999999986 99999999999998999999
Q ss_pred EcCC-CC----CceeEE-cCCCCCCCccee-----ccccccccccccCCccceEEEeeCCcEEEEec-----------Cc
Q 048136 185 FGGR-DS----FSYEYI-PAERTENAYSIP-----FQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN-----------NR 242 (559)
Q Consensus 185 vGG~-~~----~s~E~y-P~~~~~~~w~~~-----~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg-----------~~ 242 (559)
+||. +. .++|+| |.++ .|... .|++..+ .. ..+..++++|++|| ..
T Consensus 303 ~GG~~~~~~~~~~~e~yd~~t~---~W~~~~~~~~~p~~~~~--------~~-~~~~~~~~iyv~Gg~~g~~~~~~~~~~ 370 (656)
T 1k3i_A 303 IGGSWSGGVFEKNGEVYSPSSK---TWTSLPNAKVNPMLTAD--------KQ-GLYRSDNHAWLFGWKKGSVFQAGPSTA 370 (656)
T ss_dssp ECCCCCSSSCCCCEEEEETTTT---EEEEETTSCSGGGCCCC--------TT-GGGTTTCSCCEEECGGGCEEECCSSSE
T ss_pred EeCcccCCcccccceEeCCCCC---cceeCCCcccccccccc--------cc-ceeecCCceEEEECCCCcEEEecCccc
Confidence 9995 32 578999 8876 47764 4444321 11 12235888888885 34
Q ss_pred EEEeeCCCCeEEEECCCCCCCC--CcccCCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccC---
Q 048136 243 SILLDPRANYVLREYPPLPGGA--RNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALD--- 317 (559)
Q Consensus 243 ~e~yDp~t~~W~~~~p~mp~~~--~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~--- 317 (559)
+++||+.+++|.......+..+ ...++.+++++++. .+++||++||.+.... ..+++
T Consensus 371 v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~---------~~~~i~v~GG~~~~~~---------~~~~~~~~ 432 (656)
T 1k3i_A 371 MNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDA---------VKGKILTFGGSPDYQD---------SDATTNAH 432 (656)
T ss_dssp EEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEET---------TTTEEEEECCBSSSSS---------SBCCCCEE
T ss_pred eeeeecCCcceeecCCccccccccCCCCCCCceEeccC---------CCCeEEEEeCCCCCCC---------CCcCCcce
Confidence 7899999999985332211000 01244577777652 4899999999752110 13445
Q ss_pred ceEEEEecCCCCceeee---cCCCCcccccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCC
Q 048136 318 DCARMVVTSPDPVWTTE---KMPTPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAP 394 (559)
Q Consensus 318 s~~~~d~~~~~~~W~~~---~M~~~R~~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~ 394 (559)
++++||+.. ++|+.. +|+.+|.++++++++||+|||+||...+. +|. +.+++.++|+|||+++ +|+.+++
T Consensus 433 ~v~~yd~~~--~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~-~~~-~~~~~~~v~~ydp~t~---~W~~~~~ 505 (656)
T 1k3i_A 433 IITLGEPGT--SPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGI-PFE-DSTPVFTPEIYVPEQD---TFYKQNP 505 (656)
T ss_dssp EEECCSTTS--CCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCC-TTC-CCSBCCCCEEEEGGGT---EEEECCC
T ss_pred EEEcCCCCC--CCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCc-CcC-CCCcccceEEEcCCCC---ceeecCC
Confidence 455666654 789874 89999999988899999999999986432 222 3456779999999999 9999999
Q ss_pred CCCCccceeeeEECCCCceEEeCCCCCCCCcccCCCCCcceeeEEcCCCCCCC--cCCCCCcccccCCCCccCCCCeEEE
Q 048136 395 SDIPRMYHSVANLLPDGRVFVGGSNDNDGYQEWAKFPTELRLEKFSPPYLAPE--LADRRPMILVDETEKAAPYGKWVGI 472 (559)
Q Consensus 395 ~~~~R~yhs~a~llpdG~Vlv~GG~~~~~~~~~~~~~~~~~~E~y~Ppyl~~~--~~~~RP~i~~~~~p~~~~~g~~~~v 472 (559)
|+.+|.||+++++++||+|||+||+.++.+ .++++++|+|+||||+++ ..+.||+|++.+ |+.+.||++|+|
T Consensus 506 ~~~~R~~hs~a~ll~dg~v~v~GG~~~~~~-----~~~~~~~e~~~Ppyl~~~~~~~~~rP~i~~~~-~~~~~~g~~~~~ 579 (656)
T 1k3i_A 506 NSIVRVYHSISLLLPDGRVFNGGGGLCGDC-----TTNHFDAQIFTPNYLYNSNGNLATRPKITRTS-TQSVKVGGRITI 579 (656)
T ss_dssp CSSCCCTTEEEEECTTSCEEEEECCCCTTC-----SCCCCEEEEEECGGGBCTTSSBCCCCCEEEES-CSEEETTCEEEE
T ss_pred CCCccccccHhhcCCCcEEEecCCCCCCCC-----CCCeeEEEEEeChhhccCCCCcCCCCcccccC-CceecCCCEEEE
Confidence 999999999999999999999999887643 235789999999999753 456799999843 889999999999
Q ss_pred EEEeccccccceEEEEEEcCCcccccccCCcceEEeeeeeeecccCCCcEEEEEEcCCCCCccCCcceEEEEEc-CCCCC
Q 048136 473 KVKSAEMLNEFDLMVTMIAPPFVTHSISMNQRLIELAIIEIKNDVYPGVHEVVVAMPPSGNIAPPGYYMLSVVL-KGIPS 551 (559)
Q Consensus 473 ~~~~~~~~~~~~~~v~l~~~~~~TH~~~~~qR~v~l~~~~~~~~~~~g~~~~~v~~P~~~~~~ppG~ymlf~~~-~gvPS 551 (559)
+++. .+.+|+|||++|+||++|||||+|+|+++.. |+.+++|++|+|++||||||||||||+ +||||
T Consensus 580 ~~~~------~~~~~~l~~~~~~th~~~~~qr~~~l~~~~~------~~~~~~~~~p~~~~~~ppg~y~lf~~~~~g~ps 647 (656)
T 1k3i_A 580 STDS------SISKASLIRYGTATHTVNTDQRRIPLTLTNN------GGNSYSFQVPSDSGVALPGYWMLFVMNSAGVPS 647 (656)
T ss_dssp EESS------CCSEEEEEECCEEETTBCSSCCEEECCEEEE------ETTEEEEECCSCTTTSCSEEEEEEEECTTSCBC
T ss_pred EEec------cceEEEEEecCccccCcCCCCcEEecceEec------CCCEEEEECCCCCCcCCCcCeEEEEECCCCccc
Confidence 9874 2578999999999999999999999999864 235789999999999999999999996 99999
Q ss_pred ccEEEEeC
Q 048136 552 PSMWFQVK 559 (559)
Q Consensus 552 ~~~~v~i~ 559 (559)
+|+||+|+
T Consensus 648 ~~~~v~~~ 655 (656)
T 1k3i_A 648 VASTIRVT 655 (656)
T ss_dssp CCEEEEEE
T ss_pred ccEEEEEe
Confidence 99999984
No 2
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=4.5e-35 Score=297.47 Aligned_cols=271 Identities=18% Similarity=0.190 Sum_probs=213.9
Q ss_pred CCCeEEEEecccccccCCCCCCCCCCCCccccccccccCCccceeeEEEeCCCCCEEeCccCCCcccccCeecCCCcEEE
Q 048136 57 NVDEMVIFDATVWQISRLPLPDYKRPCPMHQNKATNVTNIDCWCHSVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLIS 136 (559)
Q Consensus 57 ~~gkv~~~gg~~~~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v 136 (559)
.+++||++||.+.. ......+||+.+++|+.++.++..++..+++..+++||+
T Consensus 14 ~~~~i~v~GG~~~~---------------------------~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv 66 (302)
T 2xn4_A 14 LPKLMVVVGGQAPK---------------------------AIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFA 66 (302)
T ss_dssp -CEEEEEECCBSSS---------------------------BCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEE
T ss_pred CCCEEEEECCCCCC---------------------------CCCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEE
Confidence 57899999996410 012278999999999999888877877777888999999
Q ss_pred EcCCCCC--CCeEEEEeCCCCCCeecCCCccccccccceEEEccCCcEEEEcCCCC----CceeEE-cCCCCCCCcceec
Q 048136 137 TGGFLGG--SRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGSFLIFGGRDS----FSYEYI-PAERTENAYSIPF 209 (559)
Q Consensus 137 ~GG~~~g--~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~----~s~E~y-P~~~~~~~w~~~~ 209 (559)
+||.... .+++++||+. +++|+++++ |+.+|.+++++++ +|+|||+||.+. .++|+| +.++ .|....
T Consensus 67 ~GG~~~~~~~~~~~~~d~~-~~~W~~~~~-~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~---~W~~~~ 140 (302)
T 2xn4_A 67 VGGFNGSLRVRTVDSYDPV-KDQWTSVAN-MRDRRSTLGAAVL-NGLLYAVGGFDGSTGLSSVEAYNIKSN---EWFHVA 140 (302)
T ss_dssp ESCBCSSSBCCCEEEEETT-TTEEEEECC-CSSCCBSCEEEEE-TTEEEEEEEECSSCEEEEEEEEETTTT---EEEEEC
T ss_pred EeCcCCCccccceEEECCC-CCceeeCCC-CCccccceEEEEE-CCEEEEEcCCCCCccCceEEEEeCCCC---eEeecC
Confidence 9997532 4789999999 999999986 9999999999988 899999999765 357889 8876 588777
Q ss_pred cccccccccccCCccceEEEeeCCcEEEEecC---------cEEEeeCCCCeEEEECCCCCCCCCcccCCCceeeccccc
Q 048136 210 QFLRDTYDVLENNLYPFVYLVPDGNLYIFANN---------RSILLDPRANYVLREYPPLPGGARNYPSTSTSVLLPLKL 280 (559)
Q Consensus 210 p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg~---------~~e~yDp~t~~W~~~~p~mp~~~~~~p~~g~~v~lpl~~ 280 (559)
++...+ .. +..+..+++||++||. ++++||+.+++|+ .+++||. ++.++++.+
T Consensus 141 ~~p~~r-------~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~-----~r~~~~~~~---- 202 (302)
T 2xn4_A 141 PMNTRR-------SS-VGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWT-YIAEMST-----RRSGAGVGV---- 202 (302)
T ss_dssp CCSSCC-------BS-CEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEE-EECCCSS-----CCBSCEEEE----
T ss_pred CCCCcc-------cC-ceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEE-ECCCCcc-----ccccccEEE----
Confidence 665432 23 3455679999999982 4899999999999 5888874 233444332
Q ss_pred ccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeee-cCCCCcccccEEEeeCCeEEEEcCc
Q 048136 281 YRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTE-KMPTPRVMSDGVLLPTGDVLLINGA 359 (559)
Q Consensus 281 ~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~av~LpdG~V~vvGG~ 359 (559)
++++||++||.+.. ..++++++||+.. ++|+.. +|+.+|..+. +++.+++|||+||.
T Consensus 203 -------~~~~iyv~GG~~~~------------~~~~~~~~yd~~~--~~W~~~~~~~~~r~~~~-~~~~~~~i~v~GG~ 260 (302)
T 2xn4_A 203 -------LNNLLYAVGGHDGP------------LVRKSVEVYDPTT--NAWRQVADMNMCRRNAG-VCAVNGLLYVVGGD 260 (302)
T ss_dssp -------ETTEEEEECCBSSS------------SBCCCEEEEETTT--TEEEEECCCSSCCBSCE-EEEETTEEEEECCB
T ss_pred -------ECCEEEEECCCCCC------------cccceEEEEeCCC--CCEeeCCCCCCccccCe-EEEECCEEEEECCc
Confidence 48999999997632 1357899999985 899998 9999999986 45569999999997
Q ss_pred CCCCCCccCCCCCCcccEEEeCCCCCCCeEEecC-CCCCCccceeeeEECCCCce
Q 048136 360 ELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELA-PSDIPRMYHSVANLLPDGRV 413 (559)
Q Consensus 360 ~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~-~~~~~R~yhs~a~llpdG~V 413 (559)
.. . ....++++|||+++ +|+.++ +|+.+|.+|+++++ +++|
T Consensus 261 ~~-~-------~~~~~v~~yd~~~~---~W~~~~~~~~~~r~~~~~~~~--~~~i 302 (302)
T 2xn4_A 261 DG-S-------CNLASVEYYNPTTD---KWTVVSSCMSTGRSYAGVTVI--DKRL 302 (302)
T ss_dssp CS-S-------SBCCCEEEEETTTT---EEEECSSCCSSCCBSCEEEEE--EC--
T ss_pred CC-C-------cccccEEEEcCCCC---eEEECCcccCcccccceEEEe--cccC
Confidence 52 1 23457999999999 999997 89999999988877 6654
No 3
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=4.9e-35 Score=298.65 Aligned_cols=277 Identities=17% Similarity=0.136 Sum_probs=214.9
Q ss_pred CcceeEEEeecCCCeEEEEecccccccCCCCCCCCCCCCccccccccccCCccceeeEEEeCCCCCEEeCccCCCccccc
Q 048136 46 GISAMHSVLLPNVDEMVIFDATVWQISRLPLPDYKRPCPMHQNKATNVTNIDCWCHSVFYNVNTLQVTPLKVITDTWCSS 125 (559)
Q Consensus 46 ~~~~~h~~~~~~~gkv~~~gg~~~~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yDp~t~~w~~~~~~~~~~c~~ 125 (559)
..+.-|.++. .+++||++||.+ + . ......+||+.+++|+.++.++..++..
T Consensus 13 ~~~~~~~~~~-~~~~i~v~GG~~-~-----------~---------------~~~~~~~~d~~~~~W~~~~~~p~~r~~~ 64 (308)
T 1zgk_A 13 LVPRGSHAPK-VGRLIYTAGGYF-R-----------Q---------------SLSYLEAYNPSNGTWLRLADLQVPRSGL 64 (308)
T ss_dssp --------CC-CCCCEEEECCBS-S-----------S---------------BCCCEEEEETTTTEEEECCCCSSCCBSC
T ss_pred eeeCCccccC-CCCEEEEEeCcC-C-----------C---------------CcceEEEEcCCCCeEeECCCCCcccccc
Confidence 4556788887 899999999962 1 0 0123789999999999998888777777
Q ss_pred CeecCCCcEEEEcCC----CC--CCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCcEEEEcCCCC----CceeE
Q 048136 126 GGLDVNGNLISTGGF----LG--GSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGSFLIFGGRDS----FSYEY 195 (559)
Q Consensus 126 ~~~l~dG~i~v~GG~----~~--g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~----~s~E~ 195 (559)
++++.+++||++||. .. ..+++++||+. +++|+++++ |+.+|.+++++++ +|+|||+||.+. .++|+
T Consensus 65 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~-~~~W~~~~~-~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~ 141 (308)
T 1zgk_A 65 AGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPM-TNQWSPCAP-MSVPRNRIGVGVI-DGHIYAVGGSHGCIHHNSVER 141 (308)
T ss_dssp EEEEETTEEEEECCEEEETTEEEECCCEEEEETT-TTEEEECCC-CSSCCBTCEEEEE-TTEEEEECCEETTEECCCEEE
T ss_pred eEEEECCEEEEECCCcCCCCCCeecceEEEECCC-CCeEeECCC-CCcCccccEEEEE-CCEEEEEcCCCCCcccccEEE
Confidence 778889999999997 22 14689999999 999999986 9999999999988 899999999754 46899
Q ss_pred E-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEec-------CcEEEeeCCCCeEEEECCCCCCCCCcc
Q 048136 196 I-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN-------NRSILLDPRANYVLREYPPLPGGARNY 267 (559)
Q Consensus 196 y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg-------~~~e~yDp~t~~W~~~~p~mp~~~~~~ 267 (559)
| +.++ .|....++...+ .. +..+..+++||++|| +++++||+.+++|+ .+++||.
T Consensus 142 yd~~~~---~W~~~~~~p~~r-------~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-~~~~~p~----- 204 (308)
T 1zgk_A 142 YEPERD---EWHLVAPMLTRR-------IG-VGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWR-MITAMNT----- 204 (308)
T ss_dssp EETTTT---EEEECCCCSSCC-------BS-CEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEE-ECCCCSS-----
T ss_pred ECCCCC---eEeECCCCCccc-------cc-eEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEe-eCCCCCC-----
Confidence 9 8876 587776665432 33 344556999999998 35899999999999 5888874
Q ss_pred cCCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeee-cCCCCcccccEE
Q 048136 268 PSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTE-KMPTPRVMSDGV 346 (559)
Q Consensus 268 p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~av 346 (559)
+|.++++.+ ++++||++||.+.. ..++++++||+.. ++|+.. +|+.+|..+.+
T Consensus 205 ~r~~~~~~~-----------~~~~iyv~GG~~~~------------~~~~~v~~yd~~~--~~W~~~~~~p~~r~~~~~- 258 (308)
T 1zgk_A 205 IRSGAGVCV-----------LHNCIYAAGGYDGQ------------DQLNSVERYDVET--ETWTFVAPMKHRRSALGI- 258 (308)
T ss_dssp CCBSCEEEE-----------ETTEEEEECCBCSS------------SBCCCEEEEETTT--TEEEECCCCSSCCBSCEE-
T ss_pred ccccceEEE-----------ECCEEEEEeCCCCC------------CccceEEEEeCCC--CcEEECCCCCCCccceEE-
Confidence 333444332 48999999998632 1357899999985 899998 99999999965
Q ss_pred EeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCccceeeeEE
Q 048136 347 LLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANL 407 (559)
Q Consensus 347 ~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~l 407 (559)
++.+++|||+||... .....++++|||+++ +|+.+++|+.+|.+|++++|
T Consensus 259 ~~~~~~i~v~GG~~~--------~~~~~~v~~yd~~~~---~W~~~~~~p~~r~~~~~~~l 308 (308)
T 1zgk_A 259 TVHQGRIYVLGGYDG--------HTFLDSVECYDPDTD---TWSEVTRMTSGRSGVGVAVT 308 (308)
T ss_dssp EEETTEEEEECCBCS--------SCBCCEEEEEETTTT---EEEEEEECSSCCBSCEEEEC
T ss_pred EEECCEEEEEcCcCC--------CcccceEEEEcCCCC---EEeecCCCCCCcccceeEeC
Confidence 556999999999752 123457999999999 99999999999999987653
No 4
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=7.4e-34 Score=289.02 Aligned_cols=251 Identities=12% Similarity=0.143 Sum_probs=203.7
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCC-CCCeEEEEeCCCCCCeecCCCccccccccceEEEccCC
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLG-GSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADG 180 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~-g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG 180 (559)
..+||+.+++|+.++.++..++.+++++.+++||++||... ..+++++|||. +++|+++++ |+.+|..++++++ ++
T Consensus 26 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~-~~~W~~~~~-~p~~r~~~~~~~~-~~ 102 (306)
T 3ii7_A 26 CRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVV-KDSWYSKLG-PPTPRDSLAACAA-EG 102 (306)
T ss_dssp EEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETT-TTEEEEEEC-CSSCCBSCEEEEE-TT
T ss_pred EEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCC-CCeEEECCC-CCccccceeEEEE-CC
Confidence 68999999999999988888888888889999999999752 24789999999 999999986 9999999999988 89
Q ss_pred cEEEEcCCC-C----CceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEec-----------CcE
Q 048136 181 SFLIFGGRD-S----FSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN-----------NRS 243 (559)
Q Consensus 181 ~VyvvGG~~-~----~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg-----------~~~ 243 (559)
+|||+||.+ . .++++| +.++ .|....++...+ .. +..+..+|+||++|| +++
T Consensus 103 ~iyv~GG~~~~~~~~~~~~~~d~~~~---~W~~~~~~p~~r-------~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~~ 171 (306)
T 3ii7_A 103 KIYTSGGSEVGNSALYLFECYDTRTE---SWHTKPSMLTQR-------CS-HGMVEANGLIYVCGGSLGNNVSGRVLNSC 171 (306)
T ss_dssp EEEEECCBBTTBSCCCCEEEEETTTT---EEEEECCCSSCC-------BS-CEEEEETTEEEEECCEESCTTTCEECCCE
T ss_pred EEEEECCCCCCCcEeeeEEEEeCCCC---ceEeCCCCcCCc-------ce-eEEEEECCEEEEECCCCCCCCcccccceE
Confidence 999999976 2 468999 8876 588776665432 33 344567999999997 248
Q ss_pred EEeeCCCCeEEEECCCCCCCCCcccCCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEE
Q 048136 244 ILLDPRANYVLREYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMV 323 (559)
Q Consensus 244 e~yDp~t~~W~~~~p~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d 323 (559)
++||+.+++|+ .+++||. ++.++++++ ++++||++||.+.. ..++++++||
T Consensus 172 ~~yd~~~~~W~-~~~~~p~-----~r~~~~~~~-----------~~~~i~v~GG~~~~------------~~~~~~~~yd 222 (306)
T 3ii7_A 172 EVYDPATETWT-ELCPMIE-----ARKNHGLVF-----------VKDKIFAVGGQNGL------------GGLDNVEYYD 222 (306)
T ss_dssp EEEETTTTEEE-EECCCSS-----CCBSCEEEE-----------ETTEEEEECCEETT------------EEBCCEEEEE
T ss_pred EEeCCCCCeEE-ECCCccc-----hhhcceEEE-----------ECCEEEEEeCCCCC------------CCCceEEEee
Confidence 99999999999 5888874 233444332 48999999997532 1357899999
Q ss_pred ecCCCCceeee-cCCCCcccccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCccce
Q 048136 324 VTSPDPVWTTE-KMPTPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYH 402 (559)
Q Consensus 324 ~~~~~~~W~~~-~M~~~R~~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yh 402 (559)
+.. ++|+.. +||.+|..+.++ +.+++|||+||... . .....+++|||+++ +|+.+++|+.+|.+|
T Consensus 223 ~~~--~~W~~~~~~p~~r~~~~~~-~~~~~i~v~GG~~~-~-------~~~~~~~~yd~~~~---~W~~~~~~~~~r~~~ 288 (306)
T 3ii7_A 223 IKL--NEWKMVSPMPWKGVTVKCA-AVGSIVYVLAGFQG-V-------GRLGHILEYNTETD---KWVANSKVRAFPVTS 288 (306)
T ss_dssp TTT--TEEEECCCCSCCBSCCEEE-EETTEEEEEECBCS-S-------SBCCEEEEEETTTT---EEEEEEEEECCSCTT
T ss_pred CCC--CcEEECCCCCCCccceeEE-EECCEEEEEeCcCC-C-------eeeeeEEEEcCCCC---eEEeCCCccccccee
Confidence 985 899998 999999999654 45999999999752 1 13347999999999 999999999999999
Q ss_pred eeeEECC
Q 048136 403 SVANLLP 409 (559)
Q Consensus 403 s~a~llp 409 (559)
+++++..
T Consensus 289 ~~~~~~~ 295 (306)
T 3ii7_A 289 CLICVVD 295 (306)
T ss_dssp CEEEEEE
T ss_pred EEEEECC
Confidence 8887743
No 5
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.5e-33 Score=285.79 Aligned_cols=250 Identities=19% Similarity=0.228 Sum_probs=201.9
Q ss_pred eeEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCC--CCeEEEEeCCCCCC---eecCCCccccccccceEE
Q 048136 101 HSVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGG--SRTTRYLWGCPTCD---WTEYPTALKDGRWYATQA 175 (559)
Q Consensus 101 ~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g--~~~v~~ydp~~t~~---W~~~~~~m~~~R~y~s~~ 175 (559)
...+||+.+++|+.++.++..++..+++..+++||++||.... .+++++||+. +++ |+++++ |+.+|..++++
T Consensus 32 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~-~~~~~~W~~~~~-~p~~r~~~~~~ 109 (301)
T 2vpj_A 32 VVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYT-ADEDGVWYSVAP-MNVRRGLAGAT 109 (301)
T ss_dssp CEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETT-CCTTCCCEEECC-CSSCCBSCEEE
T ss_pred EEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECC-CCCCCeeEECCC-CCCCccceeEE
Confidence 3789999999999999887778777888889999999997532 4789999999 899 999986 99999999998
Q ss_pred EccCCcEEEEcCCCC----CceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEec-------CcE
Q 048136 176 LLADGSFLIFGGRDS----FSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN-------NRS 243 (559)
Q Consensus 176 ~L~dG~VyvvGG~~~----~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg-------~~~ 243 (559)
++ +++|||+||.+. .++|+| +.++ .|....++...+ .. +..+..+++||++|| +++
T Consensus 110 ~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~---~W~~~~~~p~~r-------~~-~~~~~~~~~iyv~GG~~~~~~~~~~ 177 (301)
T 2vpj_A 110 TL-GDMIYVSGGFDGSRRHTSMERYDPNID---QWSMLGDMQTAR-------EG-AGLVVASGVIYCLGGYDGLNILNSV 177 (301)
T ss_dssp EE-TTEEEEECCBCSSCBCCEEEEEETTTT---EEEEEEECSSCC-------BS-CEEEEETTEEEEECCBCSSCBCCCE
T ss_pred EE-CCEEEEEcccCCCcccceEEEEcCCCC---eEEECCCCCCCc-------cc-ceEEEECCEEEEECCCCCCcccceE
Confidence 88 899999999764 358889 8776 588776665432 23 344566999999998 368
Q ss_pred EEeeCCCCeEEEECCCCCCCCCcccCCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEE
Q 048136 244 ILLDPRANYVLREYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMV 323 (559)
Q Consensus 244 e~yDp~t~~W~~~~p~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d 323 (559)
++||+.+++|+ .+++||. ++.++++.+ .+++||++||.+.. ..++++++||
T Consensus 178 ~~~d~~~~~W~-~~~~~p~-----~r~~~~~~~-----------~~~~i~v~GG~~~~------------~~~~~v~~yd 228 (301)
T 2vpj_A 178 EKYDPHTGHWT-NVTPMAT-----KRSGAGVAL-----------LNDHIYVVGGFDGT------------AHLSSVEAYN 228 (301)
T ss_dssp EEEETTTTEEE-EECCCSS-----CCBSCEEEE-----------ETTEEEEECCBCSS------------SBCCCEEEEE
T ss_pred EEEeCCCCcEE-eCCCCCc-----ccccceEEE-----------ECCEEEEEeCCCCC------------cccceEEEEe
Confidence 99999999999 5788874 233444332 48999999997632 1257899999
Q ss_pred ecCCCCceeee-cCCCCcccccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCccce
Q 048136 324 VTSPDPVWTTE-KMPTPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYH 402 (559)
Q Consensus 324 ~~~~~~~W~~~-~M~~~R~~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yh 402 (559)
+.. ++|+.. +||.+|..+.+ ++.+++|||+||... ......+++|||+++ +|+.+++|+.+|.+|
T Consensus 229 ~~~--~~W~~~~~~p~~r~~~~~-~~~~~~i~v~GG~~~--------~~~~~~v~~yd~~~~---~W~~~~~~~~~r~~~ 294 (301)
T 2vpj_A 229 IRT--DSWTTVTSMTTPRCYVGA-TVLRGRLYAIAGYDG--------NSLLSSIECYDPIID---SWEVVTSMGTQRCDA 294 (301)
T ss_dssp TTT--TEEEEECCCSSCCBSCEE-EEETTEEEEECCBCS--------SSBEEEEEEEETTTT---EEEEEEEEEEEEESC
T ss_pred CCC--CcEEECCCCCCcccceeE-EEECCEEEEEcCcCC--------CcccccEEEEcCCCC---eEEEcCCCCcccccc
Confidence 985 899998 99999999965 555999999999752 123347999999999 999999999999999
Q ss_pred eeeEE
Q 048136 403 SVANL 407 (559)
Q Consensus 403 s~a~l 407 (559)
+++++
T Consensus 295 ~~~~~ 299 (301)
T 2vpj_A 295 GVCVL 299 (301)
T ss_dssp EEEEE
T ss_pred eEEEe
Confidence 87765
No 6
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=8.6e-32 Score=274.60 Aligned_cols=257 Identities=16% Similarity=0.151 Sum_probs=199.3
Q ss_pred ccccCeecCCCcEEEEcCCCC-CCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCcEEEEcCC----CC----Cc
Q 048136 122 WCSSGGLDVNGNLISTGGFLG-GSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGSFLIFGGR----DS----FS 192 (559)
Q Consensus 122 ~c~~~~~l~dG~i~v~GG~~~-g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~----~~----~s 192 (559)
++...++..+++||++||... ..+++++|||. +++|+++++ |+.+|.+++++++ +++|||+||. +. ..
T Consensus 15 ~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~d~~-~~~W~~~~~-~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~ 91 (308)
T 1zgk_A 15 PRGSHAPKVGRLIYTAGGYFRQSLSYLEAYNPS-NGTWLRLAD-LQVPRSGLAGCVV-GGLLYAVGGRNNSPDGNTDSSA 91 (308)
T ss_dssp ------CCCCCCEEEECCBSSSBCCCEEEEETT-TTEEEECCC-CSSCCBSCEEEEE-TTEEEEECCEEEETTEEEECCC
T ss_pred eCCccccCCCCEEEEEeCcCCCCcceEEEEcCC-CCeEeECCC-CCcccccceEEEE-CCEEEEECCCcCCCCCCeecce
Confidence 444556678999999999721 25789999999 999999986 9999999999888 8999999997 32 46
Q ss_pred eeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEec-------CcEEEeeCCCCeEEEECCCCCCCC
Q 048136 193 YEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN-------NRSILLDPRANYVLREYPPLPGGA 264 (559)
Q Consensus 193 ~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg-------~~~e~yDp~t~~W~~~~p~mp~~~ 264 (559)
+++| |.++ .|....++...+ .++ ..++.+|+||++|| +++++||+.+++|+ .+++||.
T Consensus 92 ~~~~d~~~~---~W~~~~~~p~~r-------~~~-~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-~~~~~p~-- 157 (308)
T 1zgk_A 92 LDCYNPMTN---QWSPCAPMSVPR-------NRI-GVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWH-LVAPMLT-- 157 (308)
T ss_dssp EEEEETTTT---EEEECCCCSSCC-------BTC-EEEEETTEEEEECCEETTEECCCEEEEETTTTEEE-ECCCCSS--
T ss_pred EEEECCCCC---eEeECCCCCcCc-------ccc-EEEEECCEEEEEcCCCCCcccccEEEECCCCCeEe-ECCCCCc--
Confidence 8889 8776 587776665432 333 44556999999998 46899999999999 6888874
Q ss_pred CcccCCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeee-cCCCCcccc
Q 048136 265 RNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTE-KMPTPRVMS 343 (559)
Q Consensus 265 ~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~ 343 (559)
++.++++.+ ++++||++||.+.. ..++++++||+.. ++|+.. +||.+|..+
T Consensus 158 ---~r~~~~~~~-----------~~~~iyv~GG~~~~------------~~~~~~~~yd~~~--~~W~~~~~~p~~r~~~ 209 (308)
T 1zgk_A 158 ---RRIGVGVAV-----------LNRLLYAVGGFDGT------------NRLNSAECYYPER--NEWRMITAMNTIRSGA 209 (308)
T ss_dssp ---CCBSCEEEE-----------ETTEEEEECCBCSS------------CBCCCEEEEETTT--TEEEECCCCSSCCBSC
T ss_pred ---cccceEEEE-----------ECCEEEEEeCCCCC------------CcCceEEEEeCCC--CeEeeCCCCCCccccc
Confidence 223344332 48999999997632 1257899999985 899998 999999999
Q ss_pred cEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCccceeeeEECCCCceEEeCCCCCCC
Q 048136 344 DGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANLLPDGRVFVGGSNDNDG 423 (559)
Q Consensus 344 ~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~llpdG~Vlv~GG~~~~~ 423 (559)
.+ ++.+++|||+||... . .....+++|||+++ +|+.+++|+.+|.+|+++++ +++||++||.....
T Consensus 210 ~~-~~~~~~iyv~GG~~~-~-------~~~~~v~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~ 275 (308)
T 1zgk_A 210 GV-CVLHNCIYAAGGYDG-Q-------DQLNSVERYDVETE---TWTFVAPMKHRRSALGITVH--QGRIYVLGGYDGHT 275 (308)
T ss_dssp EE-EEETTEEEEECCBCS-S-------SBCCCEEEEETTTT---EEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSC
T ss_pred eE-EEECCEEEEEeCCCC-C-------CccceEEEEeCCCC---cEEECCCCCCCccceEEEEE--CCEEEEEcCcCCCc
Confidence 65 455999999999762 1 12457999999999 99999999999999988777 99999999964321
Q ss_pred CcccCCCCCcceeeEEcCCCCC
Q 048136 424 YQEWAKFPTELRLEKFSPPYLA 445 (559)
Q Consensus 424 ~~~~~~~~~~~~~E~y~Ppyl~ 445 (559)
...++|+|+|..-.
T Consensus 276 --------~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 276 --------FLDSVECYDPDTDT 289 (308)
T ss_dssp --------BCCEEEEEETTTTE
T ss_pred --------ccceEEEEcCCCCE
Confidence 13479999998653
No 7
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=1.8e-32 Score=280.68 Aligned_cols=263 Identities=15% Similarity=0.193 Sum_probs=199.7
Q ss_pred eEEEeCCCCCEEeCccC-CCcccccCeecCCCcEEEEcCCC---CC-----CCeEEEEeCCCCCCeecCCCccccccccc
Q 048136 102 SVFYNVNTLQVTPLKVI-TDTWCSSGGLDVNGNLISTGGFL---GG-----SRTTRYLWGCPTCDWTEYPTALKDGRWYA 172 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~-~~~~c~~~~~l~dG~i~v~GG~~---~g-----~~~v~~ydp~~t~~W~~~~~~m~~~R~y~ 172 (559)
+.+|||.+++|+..+.. ...++..++++.+++||++||.. ++ .+.+++|||. +++|+++++ |+.+|..+
T Consensus 26 ~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~-~~~W~~~~~-~p~~r~~~ 103 (318)
T 2woz_A 26 AVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNV-SSEWVGLPP-LPSARCLF 103 (318)
T ss_dssp EEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETT-TTEEEECSC-BSSCBCSC
T ss_pred eEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCC-CCcEEECCC-CCcccccc
Confidence 57899999999984322 24566677788899999999952 11 1348999999 999999986 99999999
Q ss_pred eEEEccCCcEEEEcCCCC------CceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEecC----
Q 048136 173 TQALLADGSFLIFGGRDS------FSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFANN---- 241 (559)
Q Consensus 173 s~~~L~dG~VyvvGG~~~------~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg~---- 241 (559)
+++++ +++|||+||.+. .++++| +.++ .|....++...+ .. +..+..+|+||++||.
T Consensus 104 ~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~---~W~~~~~~p~~r-------~~-~~~~~~~~~iyv~GG~~~~~ 171 (318)
T 2woz_A 104 GLGEV-DDKIYVVAGKDLQTEASLDSVLCYDPVAA---KWSEVKNLPIKV-------YG-HNVISHNGMIYCLGGKTDDK 171 (318)
T ss_dssp EEEEE-TTEEEEEEEEBTTTCCEEEEEEEEETTTT---EEEEECCCSSCE-------ES-CEEEEETTEEEEECCEESSS
T ss_pred ceEEE-CCEEEEEcCccCCCCcccceEEEEeCCCC---CEeECCCCCCcc-------cc-cEEEEECCEEEEEcCCCCCC
Confidence 99888 899999999752 357889 8776 588776665432 23 3455689999999983
Q ss_pred ----cEEEeeCCCCeEEEECCCCCCCCCcccCCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccC
Q 048136 242 ----RSILLDPRANYVLREYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALD 317 (559)
Q Consensus 242 ----~~e~yDp~t~~W~~~~p~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~ 317 (559)
++++||+.+++|+ .+++||. +|.++++.+ ++++||++||.... ..++
T Consensus 172 ~~~~~~~~yd~~~~~W~-~~~~~p~-----~r~~~~~~~-----------~~~~iyv~GG~~~~------------~~~~ 222 (318)
T 2woz_A 172 KCTNRVFIYNPKKGDWK-DLAPMKT-----PRSMFGVAI-----------HKGKIVIAGGVTED------------GLSA 222 (318)
T ss_dssp CBCCCEEEEETTTTEEE-EECCCSS-----CCBSCEEEE-----------ETTEEEEEEEEETT------------EEEE
T ss_pred CccceEEEEcCCCCEEE-ECCCCCC-----CcccceEEE-----------ECCEEEEEcCcCCC------------Cccc
Confidence 5899999999999 5888874 233333322 48999999997532 1246
Q ss_pred ceEEEEecCCCCceeee-cCCCCcccccEEEeeCCeEEEEcCcCCCCCCcc-CCCCCCcccEEEeCCCCCCCeEEecCCC
Q 048136 318 DCARMVVTSPDPVWTTE-KMPTPRVMSDGVLLPTGDVLLINGAELGSAGWK-DADKPCFKPLLYKPSKPPGSRFTELAPS 395 (559)
Q Consensus 318 s~~~~d~~~~~~~W~~~-~M~~~R~~~~av~LpdG~V~vvGG~~~g~~g~~-~~~~~~~~~e~YDP~t~~g~~Wt~~~~~ 395 (559)
++++||+.. ++|+.. +||.+|..+. +++.+++|||+||.......-+ ........+++|||+++ +|+.+ +
T Consensus 223 ~~~~yd~~~--~~W~~~~~~p~~r~~~~-~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~---~W~~~--~ 294 (318)
T 2woz_A 223 SVEAFDLKT--NKWEVMTEFPQERSSIS-LVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKK---EWAGM--L 294 (318)
T ss_dssp EEEEEETTT--CCEEECCCCSSCCBSCE-EEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTT---EEEEE--E
T ss_pred eEEEEECCC--CeEEECCCCCCcccceE-EEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCC---Eehhh--c
Confidence 789999985 899998 9999999996 4566999999999752100000 00122457999999999 99998 7
Q ss_pred CCCccceeeeEECCCCceEEeC
Q 048136 396 DIPRMYHSVANLLPDGRVFVGG 417 (559)
Q Consensus 396 ~~~R~yhs~a~llpdG~Vlv~G 417 (559)
+.+|..|+++++ +++||+..
T Consensus 295 ~~~r~~~~~~~~--~~~iyi~~ 314 (318)
T 2woz_A 295 KEIRYASGASCL--ATRLNLFK 314 (318)
T ss_dssp SCCGGGTTCEEE--EEEEEGGG
T ss_pred ccccccccceee--CCEEEEEE
Confidence 889999988887 99999874
No 8
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=1.5e-32 Score=281.03 Aligned_cols=262 Identities=13% Similarity=0.125 Sum_probs=201.4
Q ss_pred eEEEeCCCCCEEeCccC--CCcccccCeecCCCcEEEEcCCC----C-C---CCeEEEEeCCCCCCeecCCCcccccccc
Q 048136 102 SVFYNVNTLQVTPLKVI--TDTWCSSGGLDVNGNLISTGGFL----G-G---SRTTRYLWGCPTCDWTEYPTALKDGRWY 171 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~--~~~~c~~~~~l~dG~i~v~GG~~----~-g---~~~v~~ydp~~t~~W~~~~~~m~~~R~y 171 (559)
+.+|||.+++|+. +.+ +..++.+++++.+++||++||.. . . .+.+++|||. +++|+++++ |+.+|..
T Consensus 15 ~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~-~~~W~~~~~-~p~~r~~ 91 (315)
T 4asc_A 15 AVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHL-DSEWLGMPP-LPSPRCL 91 (315)
T ss_dssp EEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETT-TTEEEECCC-BSSCEES
T ss_pred eEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCC-CCeEEECCC-CCcchhc
Confidence 5789999999987 433 33566677788899999999951 1 1 2458999999 999999986 9999999
Q ss_pred ceEEEccCCcEEEEcCCC----C---CceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEecC--
Q 048136 172 ATQALLADGSFLIFGGRD----S---FSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFANN-- 241 (559)
Q Consensus 172 ~s~~~L~dG~VyvvGG~~----~---~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg~-- 241 (559)
++++++ +++|||+||.+ . .++++| |.++ .|....++...+ +.+..+..+++||++||.
T Consensus 92 ~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~---~W~~~~~~p~~r--------~~~~~~~~~~~iyv~GG~~~ 159 (315)
T 4asc_A 92 FGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSF---KWGESDPLPYVV--------YGHTVLSHMDLVYVIGGKGS 159 (315)
T ss_dssp CEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTT---EEEECCCCSSCC--------BSCEEEEETTEEEEECCBCT
T ss_pred eeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCC---cEeECCCCCCcc--------cceeEEEECCEEEEEeCCCC
Confidence 999888 89999999953 1 468999 8876 588776665432 334455689999999984
Q ss_pred ------cEEEeeCCCCeEEEECCCCCCCCCcccCCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccc
Q 048136 242 ------RSILLDPRANYVLREYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPA 315 (559)
Q Consensus 242 ------~~e~yDp~t~~W~~~~p~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a 315 (559)
++++||+.+++|+ .+++||. +|.++++.+ ++++||++||.+.. ..
T Consensus 160 ~~~~~~~~~~yd~~~~~W~-~~~~~p~-----~r~~~~~~~-----------~~~~iyv~GG~~~~------------~~ 210 (315)
T 4asc_A 160 DRKCLNKMCVYDPKKFEWK-ELAPMQT-----ARSLFGATV-----------HDGRIIVAAGVTDT------------GL 210 (315)
T ss_dssp TSCBCCCEEEEETTTTEEE-ECCCCSS-----CCBSCEEEE-----------ETTEEEEEEEECSS------------SE
T ss_pred CCcccceEEEEeCCCCeEE-ECCCCCC-----chhceEEEE-----------ECCEEEEEeccCCC------------Cc
Confidence 5899999999999 5888874 333444332 48999999997632 13
Q ss_pred cCceEEEEecCCCCceeee-cCCCCcccccEEEeeCCeEEEEcCcCCCCCCccCCC---CCCcccEEEeCCCCCCCeEEe
Q 048136 316 LDDCARMVVTSPDPVWTTE-KMPTPRVMSDGVLLPTGDVLLINGAELGSAGWKDAD---KPCFKPLLYKPSKPPGSRFTE 391 (559)
Q Consensus 316 ~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~av~LpdG~V~vvGG~~~g~~g~~~~~---~~~~~~e~YDP~t~~g~~Wt~ 391 (559)
++++++||+.. ++|+.. +||.+|..+.+ ++.+++|||+||... ... .... .....+++|||+++ +|+.
T Consensus 211 ~~~~~~yd~~~--~~W~~~~~~p~~r~~~~~-~~~~~~l~v~GG~~~-~~~-~~~~~~~~~~~~v~~yd~~~~---~W~~ 282 (315)
T 4asc_A 211 TSSAEVYSITD--NKWAPFEAFPQERSSLSL-VSLVGTLYAIGGFAT-LET-ESGELVPTELNDIWRYNEEEK---KWEG 282 (315)
T ss_dssp EEEEEEEETTT--TEEEEECCCSSCCBSCEE-EEETTEEEEEEEEEE-EEC-TTSCEEEEEEEEEEEEETTTT---EEEE
T ss_pred cceEEEEECCC--CeEEECCCCCCcccceeE-EEECCEEEEECCccc-cCc-CCccccccccCcEEEecCCCC---hhhh
Confidence 46889999985 899998 99999999965 556999999999752 100 0000 12346899999999 9999
Q ss_pred cCCCCCCccceeeeEECCCCceEEeCCC
Q 048136 392 LAPSDIPRMYHSVANLLPDGRVFVGGSN 419 (559)
Q Consensus 392 ~~~~~~~R~yhs~a~llpdG~Vlv~GG~ 419 (559)
+ ++.+|..|+++++ ++++++....
T Consensus 283 ~--~~~~r~~~~~~~~--~~~l~v~~~~ 306 (315)
T 4asc_A 283 V--LREIAYAAGATFL--PVRLNVLRLT 306 (315)
T ss_dssp E--ESCSSCCSSCEEE--EEEECGGGSE
T ss_pred h--ccCCcCccceEEe--CCEEEEEEeh
Confidence 8 6778999988887 9999998753
No 9
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.5e-31 Score=271.56 Aligned_cols=252 Identities=17% Similarity=0.204 Sum_probs=197.3
Q ss_pred cCCCcEEEEcCCCC-CCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCcEEEEcCCCC----CceeEE-cCCCCC
Q 048136 129 DVNGNLISTGGFLG-GSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGSFLIFGGRDS----FSYEYI-PAERTE 202 (559)
Q Consensus 129 l~dG~i~v~GG~~~-g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~----~s~E~y-P~~~~~ 202 (559)
..+++||++||... ..+++++||+. +++|..+++ |+.+|.+++++++ +++|||+||.+. .++++| |.++
T Consensus 13 ~~~~~i~v~GG~~~~~~~~~~~~d~~-~~~W~~~~~-~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~-- 87 (302)
T 2xn4_A 13 NLPKLMVVVGGQAPKAIRSVECYDFK-EERWHQVAE-LPSRRCRAGMVYM-AGLVFAVGGFNGSLRVRTVDSYDPVKD-- 87 (302)
T ss_dssp --CEEEEEECCBSSSBCCCEEEEETT-TTEEEEECC-CSSCCBSCEEEEE-TTEEEEESCBCSSSBCCCEEEEETTTT--
T ss_pred CCCCEEEEECCCCCCCCCcEEEEcCc-CCcEeEccc-CCcccccceEEEE-CCEEEEEeCcCCCccccceEEECCCCC--
Confidence 35789999999743 24789999999 999999986 9999999999888 899999999764 468889 8876
Q ss_pred CCcceeccccccccccccCCccceEEEeeCCcEEEEec-------CcEEEeeCCCCeEEEECCCCCCCCCcccCCCceee
Q 048136 203 NAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN-------NRSILLDPRANYVLREYPPLPGGARNYPSTSTSVL 275 (559)
Q Consensus 203 ~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg-------~~~e~yDp~t~~W~~~~p~mp~~~~~~p~~g~~v~ 275 (559)
.|....++...+ .+ +..++.+|+||++|| +++++||+.+++|. .+++||. ++.++++.
T Consensus 88 -~W~~~~~~p~~r-------~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~-~~~~~p~-----~r~~~~~~ 152 (302)
T 2xn4_A 88 -QWTSVANMRDRR-------ST-LGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWF-HVAPMNT-----RRSSVGVG 152 (302)
T ss_dssp -EEEEECCCSSCC-------BS-CEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEE-EECCCSS-----CCBSCEEE
T ss_pred -ceeeCCCCCccc-------cc-eEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEe-ecCCCCC-----cccCceEE
Confidence 588777665432 33 345567999999998 36899999999999 5888874 23344433
Q ss_pred cccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeee-cCCCCcccccEEEeeCCeEE
Q 048136 276 LPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTE-KMPTPRVMSDGVLLPTGDVL 354 (559)
Q Consensus 276 lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~av~LpdG~V~ 354 (559)
+ ++++||++||.+.... ..++++++||+.. ++|+.. +||.+|..+. +++.+++||
T Consensus 153 ~-----------~~~~iyv~GG~~~~~~----------~~~~~~~~yd~~~--~~W~~~~~~p~~r~~~~-~~~~~~~iy 208 (302)
T 2xn4_A 153 V-----------VGGLLYAVGGYDVASR----------QCLSTVECYNATT--NEWTYIAEMSTRRSGAG-VGVLNNLLY 208 (302)
T ss_dssp E-----------ETTEEEEECCEETTTT----------EECCCEEEEETTT--TEEEEECCCSSCCBSCE-EEEETTEEE
T ss_pred E-----------ECCEEEEEeCCCCCCC----------ccccEEEEEeCCC--CcEEECCCCcccccccc-EEEECCEEE
Confidence 2 4899999999753210 2357899999985 899998 9999999996 455699999
Q ss_pred EEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCccceeeeEECCCCceEEeCCCCCCCCcccCCCCCcc
Q 048136 355 LINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANLLPDGRVFVGGSNDNDGYQEWAKFPTEL 434 (559)
Q Consensus 355 vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~llpdG~Vlv~GG~~~~~~~~~~~~~~~~ 434 (559)
|+||... . ....++++|||+++ +|+.+++|+.+|..|+++++ +++||++||..... ...
T Consensus 209 v~GG~~~-~-------~~~~~~~~yd~~~~---~W~~~~~~~~~r~~~~~~~~--~~~i~v~GG~~~~~--------~~~ 267 (302)
T 2xn4_A 209 AVGGHDG-P-------LVRKSVEVYDPTTN---AWRQVADMNMCRRNAGVCAV--NGLLYVVGGDDGSC--------NLA 267 (302)
T ss_dssp EECCBSS-S-------SBCCCEEEEETTTT---EEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSS--------BCC
T ss_pred EECCCCC-C-------cccceEEEEeCCCC---CEeeCCCCCCccccCeEEEE--CCEEEEECCcCCCc--------ccc
Confidence 9999752 1 12347999999999 99999999999999987776 99999999964321 134
Q ss_pred eeeEEcCCCCC
Q 048136 435 RLEKFSPPYLA 445 (559)
Q Consensus 435 ~~E~y~Ppyl~ 445 (559)
++|+|+|..-.
T Consensus 268 ~v~~yd~~~~~ 278 (302)
T 2xn4_A 268 SVEYYNPTTDK 278 (302)
T ss_dssp CEEEEETTTTE
T ss_pred cEEEEcCCCCe
Confidence 79999998753
No 10
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=2.6e-31 Score=270.23 Aligned_cols=251 Identities=14% Similarity=0.151 Sum_probs=197.6
Q ss_pred CCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCcEEEEcCCCC---CceeEE-cCCCCCCCcc
Q 048136 131 NGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGSFLIFGGRDS---FSYEYI-PAERTENAYS 206 (559)
Q Consensus 131 dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~---~s~E~y-P~~~~~~~w~ 206 (559)
.+.||++||... .+++++|||. +++|+++++ |+.+|.+++++++ +++|||+||.+. ..+++| |.++ .|.
T Consensus 11 ~~~l~~~GG~~~-~~~~~~~d~~-~~~W~~~~~-~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~d~~~~---~W~ 83 (306)
T 3ii7_A 11 HDYRIALFGGSQ-PQSCRYFNPK-DYSWTDIRC-PFEKRRDAACVFW-DNVVYILGGSQLFPIKRMDCYNVVKD---SWY 83 (306)
T ss_dssp CCEEEEEECCSS-TTSEEEEETT-TTEEEECCC-CSCCCBSCEEEEE-TTEEEEECCBSSSBCCEEEEEETTTT---EEE
T ss_pred cceEEEEeCCCC-CceEEEecCC-CCCEecCCC-CCcccceeEEEEE-CCEEEEEeCCCCCCcceEEEEeCCCC---eEE
Confidence 478999999843 7899999999 999999986 9999999999888 899999999762 457889 8876 587
Q ss_pred eeccccccccccccCCccceEEEeeCCcEEEEecC--------cEEEeeCCCCeEEEECCCCCCCCCcccCCCceeeccc
Q 048136 207 IPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFANN--------RSILLDPRANYVLREYPPLPGGARNYPSTSTSVLLPL 278 (559)
Q Consensus 207 ~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg~--------~~e~yDp~t~~W~~~~p~mp~~~~~~p~~g~~v~lpl 278 (559)
...++...+ .. +..++.+++||++||. ++++||+.+++|+ .+++||. ++.+++++.
T Consensus 84 ~~~~~p~~r-------~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~-~~~~~p~-----~r~~~~~~~-- 147 (306)
T 3ii7_A 84 SKLGPPTPR-------DS-LAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWH-TKPSMLT-----QRCSHGMVE-- 147 (306)
T ss_dssp EEECCSSCC-------BS-CEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEE-EECCCSS-----CCBSCEEEE--
T ss_pred ECCCCCccc-------cc-eeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceE-eCCCCcC-----CcceeEEEE--
Confidence 776665432 33 3455669999999983 4899999999999 5888884 233344332
Q ss_pred ccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeee-cCCCCcccccEEEeeCCeEEEEc
Q 048136 279 KLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTE-KMPTPRVMSDGVLLPTGDVLLIN 357 (559)
Q Consensus 279 ~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~av~LpdG~V~vvG 357 (559)
++++||++||...... ....++++++||+.. ++|+.. +|+.+|..+.+ ++.+++|||+|
T Consensus 148 ---------~~~~iyv~GG~~~~~~--------~~~~~~~~~~yd~~~--~~W~~~~~~p~~r~~~~~-~~~~~~i~v~G 207 (306)
T 3ii7_A 148 ---------ANGLIYVCGGSLGNNV--------SGRVLNSCEVYDPAT--ETWTELCPMIEARKNHGL-VFVKDKIFAVG 207 (306)
T ss_dssp ---------ETTEEEEECCEESCTT--------TCEECCCEEEEETTT--TEEEEECCCSSCCBSCEE-EEETTEEEEEC
T ss_pred ---------ECCEEEEECCCCCCCC--------cccccceEEEeCCCC--CeEEECCCccchhhcceE-EEECCEEEEEe
Confidence 4899999999753211 001267899999985 899998 99999999965 45599999999
Q ss_pred CcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCccceeeeEECCCCceEEeCCCCCCCCcccCCCCCcceee
Q 048136 358 GAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANLLPDGRVFVGGSNDNDGYQEWAKFPTELRLE 437 (559)
Q Consensus 358 G~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~llpdG~Vlv~GG~~~~~~~~~~~~~~~~~~E 437 (559)
|... . .....+++|||+++ +|+.+++|+.+|.+|+++++ +++|||+||..... ...+++
T Consensus 208 G~~~-~-------~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~--------~~~~~~ 266 (306)
T 3ii7_A 208 GQNG-L-------GGLDNVEYYDIKLN---EWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVG--------RLGHIL 266 (306)
T ss_dssp CEET-T-------EEBCCEEEEETTTT---EEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSS--------BCCEEE
T ss_pred CCCC-C-------CCCceEEEeeCCCC---cEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCe--------eeeeEE
Confidence 9752 1 12347999999999 99999999999999988777 99999999965331 134799
Q ss_pred EEcCCCCC
Q 048136 438 KFSPPYLA 445 (559)
Q Consensus 438 ~y~Ppyl~ 445 (559)
+|+|..-.
T Consensus 267 ~yd~~~~~ 274 (306)
T 3ii7_A 267 EYNTETDK 274 (306)
T ss_dssp EEETTTTE
T ss_pred EEcCCCCe
Confidence 99998753
No 11
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.98 E-value=1.6e-30 Score=263.60 Aligned_cols=251 Identities=16% Similarity=0.186 Sum_probs=195.9
Q ss_pred CCCcEEEEcC-CCCC--CCeEEEEeCCCCCCeecCCCccccccccceEEEccCCcEEEEcCCCC----CceeEE-cCCCC
Q 048136 130 VNGNLISTGG-FLGG--SRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGSFLIFGGRDS----FSYEYI-PAERT 201 (559)
Q Consensus 130 ~dG~i~v~GG-~~~g--~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~----~s~E~y-P~~~~ 201 (559)
.+++||++|| ...+ .+++++||+. +++|..++. |+.+|.+++++.+ +++||++||.+. .++++| +.+++
T Consensus 13 ~~~~i~~~GG~~~~~~~~~~~~~~d~~-~~~W~~~~~-~p~~r~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~d~~~~~ 89 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQQSPIDVVEKYDPK-TQEWSFLPS-ITRKRRYVASVSL-HDRIYVIGGYDGRSRLSSVECLDYTADE 89 (301)
T ss_dssp CCEEEEEECCEETTTEECCCEEEEETT-TTEEEECCC-CSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTCCT
T ss_pred CCCEEEEEeCccCCCcceeEEEEEcCC-CCeEEeCCC-CChhhccccEEEE-CCEEEEEcCCCCCccCceEEEEECCCCC
Confidence 5889999999 4322 4789999999 999999986 9999999999887 899999999764 467888 87752
Q ss_pred CCCcceeccccccccccccCCccceEEEeeCCcEEEEec-------CcEEEeeCCCCeEEEECCCCCCCCCcccCCCcee
Q 048136 202 ENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN-------NRSILLDPRANYVLREYPPLPGGARNYPSTSTSV 274 (559)
Q Consensus 202 ~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg-------~~~e~yDp~t~~W~~~~p~mp~~~~~~p~~g~~v 274 (559)
...|....++...+ .++ ..+..+++||++|| +++++||+.+++|+ .+++||. ++.++++
T Consensus 90 ~~~W~~~~~~p~~r-------~~~-~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~-~~~~~p~-----~r~~~~~ 155 (301)
T 2vpj_A 90 DGVWYSVAPMNVRR-------GLA-GATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWS-MLGDMQT-----AREGAGL 155 (301)
T ss_dssp TCCCEEECCCSSCC-------BSC-EEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEE-EEEECSS-----CCBSCEE
T ss_pred CCeeEECCCCCCCc-------cce-eEEEECCEEEEEcccCCCcccceEEEEcCCCCeEE-ECCCCCC-----CcccceE
Confidence 11287776664432 333 44566999999998 36899999999999 5787774 2334443
Q ss_pred ecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeee-cCCCCcccccEEEeeCCeE
Q 048136 275 LLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTE-KMPTPRVMSDGVLLPTGDV 353 (559)
Q Consensus 275 ~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~av~LpdG~V 353 (559)
.. ++++||++||.+.. ..++++++||+.. ++|+.. +||.+|..+.+ ++.+++|
T Consensus 156 ~~-----------~~~~iyv~GG~~~~------------~~~~~~~~~d~~~--~~W~~~~~~p~~r~~~~~-~~~~~~i 209 (301)
T 2vpj_A 156 VV-----------ASGVIYCLGGYDGL------------NILNSVEKYDPHT--GHWTNVTPMATKRSGAGV-ALLNDHI 209 (301)
T ss_dssp EE-----------ETTEEEEECCBCSS------------CBCCCEEEEETTT--TEEEEECCCSSCCBSCEE-EEETTEE
T ss_pred EE-----------ECCEEEEECCCCCC------------cccceEEEEeCCC--CcEEeCCCCCcccccceE-EEECCEE
Confidence 32 48999999997632 2457899999985 899998 99999999964 5569999
Q ss_pred EEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCccceeeeEECCCCceEEeCCCCCCCCcccCCCCCc
Q 048136 354 LLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANLLPDGRVFVGGSNDNDGYQEWAKFPTE 433 (559)
Q Consensus 354 ~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~llpdG~Vlv~GG~~~~~~~~~~~~~~~ 433 (559)
||+||... . ....++++||++++ +|+.+++|+.+|.+|+++++ +++||++||..... ..
T Consensus 210 ~v~GG~~~-~-------~~~~~v~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~--------~~ 268 (301)
T 2vpj_A 210 YVVGGFDG-T-------AHLSSVEAYNIRTD---SWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNS--------LL 268 (301)
T ss_dssp EEECCBCS-S-------SBCCCEEEEETTTT---EEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSS--------BE
T ss_pred EEEeCCCC-C-------cccceEEEEeCCCC---cEEECCCCCCcccceeEEEE--CCEEEEEcCcCCCc--------cc
Confidence 99999762 1 12347999999999 99999999999999987776 99999999964321 13
Q ss_pred ceeeEEcCCCC
Q 048136 434 LRLEKFSPPYL 444 (559)
Q Consensus 434 ~~~E~y~Ppyl 444 (559)
.++|+|+|..-
T Consensus 269 ~~v~~yd~~~~ 279 (301)
T 2vpj_A 269 SSIECYDPIID 279 (301)
T ss_dssp EEEEEEETTTT
T ss_pred ccEEEEcCCCC
Confidence 57999999764
No 12
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.97 E-value=1.3e-30 Score=270.76 Aligned_cols=260 Identities=15% Similarity=0.161 Sum_probs=188.7
Q ss_pred eCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCC-CCCeecCCCccc-cccccceEEEccCCcEEEEcCC-C-
Q 048136 114 PLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCP-TCDWTEYPTALK-DGRWYATQALLADGSFLIFGGR-D- 189 (559)
Q Consensus 114 ~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~-t~~W~~~~~~m~-~~R~y~s~~~L~dG~VyvvGG~-~- 189 (559)
+++.++..++.+.+++.+++||++||.. .+++++||+.+ +++|+++++ |+ .+|.+++++++ +|+|||+||. +
T Consensus 2 ~l~~lP~~r~~~~~~~~~~~iyv~GG~~--~~~~~~~d~~~~~~~W~~~~~-~p~~~R~~~~~~~~-~~~lyv~GG~~~~ 77 (357)
T 2uvk_A 2 VLPETPVPFKSGTGAIDNDTVYIGLGSA--GTAWYKLDTQAKDKKWTALAA-FPGGPRDQATSAFI-DGNLYVFGGIGKN 77 (357)
T ss_dssp CSCCCSSCCCSCEEEEETTEEEEECGGG--TTCEEEEETTSSSCCEEECCC-CTTCCCBSCEEEEE-TTEEEEECCEEEC
T ss_pred CCCCCCccccceEEEEECCEEEEEeCcC--CCeEEEEccccCCCCeeECCC-CCCCcCccceEEEE-CCEEEEEcCCCCC
Confidence 3556666777777777799999999974 36899999972 389999986 99 89999999888 8999999998 2
Q ss_pred --C-----CceeEE-cCCCCCCCcceecccc-ccccccccCCccceEEEeeCCcEEEEec--------------------
Q 048136 190 --S-----FSYEYI-PAERTENAYSIPFQFL-RDTYDVLENNLYPFVYLVPDGNLYIFAN-------------------- 240 (559)
Q Consensus 190 --~-----~s~E~y-P~~~~~~~w~~~~p~l-~~~~d~~~~~~yp~~~~l~~G~iyv~Gg-------------------- 240 (559)
. .++++| |.++ .|....++. .. +.. +..+..+|+||++||
T Consensus 78 ~~~~~~~~~~v~~yd~~~~---~W~~~~~~~p~~-------r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~ 146 (357)
T 2uvk_A 78 SEGLTQVFNDVHKYNPKTN---SWVKLMSHAPMG-------MAG-HVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDS 146 (357)
T ss_dssp TTSCEEECCCEEEEETTTT---EEEECSCCCSSC-------CSS-EEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCH
T ss_pred CCccceeeccEEEEeCCCC---cEEECCCCCCcc-------ccc-ceEEEECCEEEEEeCcCCCcCcccccchhhcCCcc
Confidence 1 468999 8876 588777765 22 233 444558999999998
Q ss_pred ---------------------CcEEEeeCCCCeEEEECCCCCCCCCcccCCCceeecccccccccccccCcEEEEEcCCC
Q 048136 241 ---------------------NRSILLDPRANYVLREYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSV 299 (559)
Q Consensus 241 ---------------------~~~e~yDp~t~~W~~~~p~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~ 299 (559)
+++++||+.+++|+ .+++||..++ .++++++ .+++||++||..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~-~~~~~p~~~~----~~~~~~~-----------~~~~iyv~GG~~ 210 (357)
T 2uvk_A 147 TAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWS-YAGESPWYGT----AGAAVVN-----------KGDKTWLINGEA 210 (357)
T ss_dssp HHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEE-EEEECSSCCC----BSCEEEE-----------ETTEEEEECCEE
T ss_pred cchhhhhhhhccccccccCCcccEEEEeCCCCcEE-ECCCCCCCCc----ccccEEE-----------ECCEEEEEeeec
Confidence 36899999999999 5777774222 2233322 489999999975
Q ss_pred CccccccccccccccccCceEEEEecCCCCceeee-cCCCCcc--cccEEEeeCCeEEEEcCcCCCCC------C--c-c
Q 048136 300 PEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTE-KMPTPRV--MSDGVLLPTGDVLLINGAELGSA------G--W-K 367 (559)
Q Consensus 300 ~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~--~~~av~LpdG~V~vvGG~~~g~~------g--~-~ 367 (559)
... ..++.+++||+...+++|+.. +|+.+|. .+ ++++.+++|||+||...... + | .
T Consensus 211 ~~~-----------~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~-~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~ 278 (357)
T 2uvk_A 211 KPG-----------LRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGG-FAGISNDSLIFAGGAGFKGSRENYQNGKNYAH 278 (357)
T ss_dssp ETT-----------EECCCEEEEECC---CEEEECCCSSTTTCCBSC-EEEEETTEEEEECCEECTTHHHHHHTTCSSTT
T ss_pred CCC-----------cccCceEEEEecCCCCcEEecCCCCCCcccccc-eEEEECCEEEEEcCccccCCcccccccceecc
Confidence 211 135678889874335899997 8877754 55 35667999999999742100 0 0 0
Q ss_pred CCCCCCcccEEEeCCCCCCCeEEecCCCCCCccceeeeEECCCCceEEeCCCCC
Q 048136 368 DADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANLLPDGRVFVGGSNDN 421 (559)
Q Consensus 368 ~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~llpdG~Vlv~GG~~~ 421 (559)
.....+.++++|||+++ +|+.+++|+.+|.+|+++++ +++|||+||...
T Consensus 279 ~~~~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~ 327 (357)
T 2uvk_A 279 EGLKKSYSTDIHLWHNG---KWDKSGELSQGRAYGVSLPW--NNSLLIIGGETA 327 (357)
T ss_dssp TTCCCEECCEEEECC------CEEEEECSSCCBSSEEEEE--TTEEEEEEEECG
T ss_pred ccccceeeEEEEecCCC---ceeeCCCCCCCcccceeEEe--CCEEEEEeeeCC
Confidence 01123457899999999 99999999999999987666 999999999654
No 13
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.97 E-value=8.5e-30 Score=286.88 Aligned_cols=299 Identities=13% Similarity=0.108 Sum_probs=206.8
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecC-CCcEEEEcCCCC--------CCCeEEEEeCCCCCCeecCCCccccccccc
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDV-NGNLISTGGFLG--------GSRTTRYLWGCPTCDWTEYPTALKDGRWYA 172 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~-dG~i~v~GG~~~--------g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~ 172 (559)
...|||.+++|+++..++.. ..+.++++ +|+||++||... +.+.+++|||. +++|++++. |+.+|..+
T Consensus 168 ~~~~dp~~~~W~~~~~~P~~-~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~-t~~w~~~~~-~~~~~~~~ 244 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDLPIV-PAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPS-TGIVSDRTV-TVTKHDMF 244 (656)
T ss_dssp CCCCCTTSCEEEEEEECSSC-CSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTT-TCCBCCCEE-EECSCCCS
T ss_pred cccCCCCCCeeeeeccCCCC-ceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCC-CCcEEeCcc-cCCCCCCc
Confidence 45689999999998876552 23344555 999999999742 12478999999 999999975 88777544
Q ss_pred --eEEEccCCcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEec--------C
Q 048136 173 --TQALLADGSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN--------N 241 (559)
Q Consensus 173 --s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg--------~ 241 (559)
+++++.||+|||+||.+..++++| |.++ .|....+|... |.++.+++++||+||++|| +
T Consensus 245 ~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~---~W~~~~~~~~~-------R~~~s~~~~~dg~iyv~GG~~~~~~~~~ 314 (656)
T 1k3i_A 245 CPGISMDGNGQIVVTGGNDAKKTSLYDSSSD---SWIPGPDMQVA-------RGYQSSATMSDGRVFTIGGSWSGGVFEK 314 (656)
T ss_dssp SCEEEECTTSCEEEECSSSTTCEEEEEGGGT---EEEECCCCSSC-------CSSCEEEECTTSCEEEECCCCCSSSCCC
T ss_pred cccccCCCCCCEEEeCCCCCCceEEecCcCC---ceeECCCCCcc-------ccccceEEecCCeEEEEeCcccCCcccc
Confidence 466777999999999877789999 8876 58877666543 4677777667999999999 4
Q ss_pred cEEEeeCCCCeEEEECCCCCCCCCcccCCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEE
Q 048136 242 RSILLDPRANYVLREYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCAR 321 (559)
Q Consensus 242 ~~e~yDp~t~~W~~~~p~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~ 321 (559)
++|+||+.+++|+ .++.+...++..++.. ++.. .+++||++||.+...+. .-.++++++
T Consensus 315 ~~e~yd~~t~~W~-~~~~~~~~p~~~~~~~-~~~~-----------~~~~iyv~Gg~~g~~~~--------~~~~~~v~~ 373 (656)
T 1k3i_A 315 NGEVYSPSSKTWT-SLPNAKVNPMLTADKQ-GLYR-----------SDNHAWLFGWKKGSVFQ--------AGPSTAMNW 373 (656)
T ss_dssp CEEEEETTTTEEE-EETTSCSGGGCCCCTT-GGGT-----------TTCSCCEEECGGGCEEE--------CCSSSEEEE
T ss_pred cceEeCCCCCcce-eCCCcccccccccccc-ceee-----------cCCceEEEECCCCcEEE--------ecCccceee
Confidence 6899999999999 4643211111112222 2211 48899999997532110 123568899
Q ss_pred EEecCCCCceeee--cCCC------CcccccEEEe--eCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEe
Q 048136 322 MVVTSPDPVWTTE--KMPT------PRVMSDGVLL--PTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTE 391 (559)
Q Consensus 322 ~d~~~~~~~W~~~--~M~~------~R~~~~av~L--pdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~ 391 (559)
||+.. +.|... .++. +|..+.++++ .+|+|||+||... ..+ ....+....+++|||+++ +|+.
T Consensus 374 yd~~~--~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~-~~~-~~~~~~~~~v~~yd~~~~---~W~~ 446 (656)
T 1k3i_A 374 YYTSG--SGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPD-YQD-SDATTNAHIITLGEPGTS---PNTV 446 (656)
T ss_dssp EECST--TCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSS-SSS-SBCCCCEEEEECCSTTSC---CEEE
T ss_pred eecCC--cceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCC-CCC-CCcCCcceEEEcCCCCCC---CeeE
Confidence 99985 677653 3333 3445545553 4899999999752 110 001112236899999999 9998
Q ss_pred cC--CCCCCccceeeeEECCCCceEEeCCCCCCCCcccCCCCCcceeeEEcCCCC
Q 048136 392 LA--PSDIPRMYHSVANLLPDGRVFVGGSNDNDGYQEWAKFPTELRLEKFSPPYL 444 (559)
Q Consensus 392 ~~--~~~~~R~yhs~a~llpdG~Vlv~GG~~~~~~~~~~~~~~~~~~E~y~Ppyl 444 (559)
+. +|+.+|..|+ ++++|||+|||+||..... .+.+.. ...++|+|+|..-
T Consensus 447 ~~~~~mp~~R~~~~-~~~l~~g~i~v~GG~~~~~-~~~~~~-~~~~v~~ydp~t~ 498 (656)
T 1k3i_A 447 FASNGLYFARTFHT-SVVLPDGSTFITGGQRRGI-PFEDST-PVFTPEIYVPEQD 498 (656)
T ss_dssp ECTTCCSSCCBSCE-EEECTTSCEEEECCBSBCC-TTCCCS-BCCCCEEEEGGGT
T ss_pred EccCCCCCCcccCC-eEECCCCCEEEECCcccCc-CcCCCC-cccceEEEcCCCC
Confidence 86 9999999995 5677999999999964321 011111 1457999999763
No 14
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.97 E-value=4.9e-29 Score=258.95 Aligned_cols=285 Identities=13% Similarity=0.084 Sum_probs=201.1
Q ss_pred ecCCCCCcceeEEEeecCCCeEEEEecccccccCCCCCCCCCCCCccccccccccCCccceeeEEEeCC--CCCEEeCcc
Q 048136 40 LLPNNPGISAMHSVLLPNVDEMVIFDATVWQISRLPLPDYKRPCPMHQNKATNVTNIDCWCHSVFYNVN--TLQVTPLKV 117 (559)
Q Consensus 40 ~~~~~~~~~~~h~~~~~~~gkv~~~gg~~~~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yDp~--t~~w~~~~~ 117 (559)
.+++++..+..|++++ .+++||++||.+ + ....+||+. +++|+.++.
T Consensus 2 ~l~~lP~~r~~~~~~~-~~~~iyv~GG~~------------~------------------~~~~~~d~~~~~~~W~~~~~ 50 (357)
T 2uvk_A 2 VLPETPVPFKSGTGAI-DNDTVYIGLGSA------------G------------------TAWYKLDTQAKDKKWTALAA 50 (357)
T ss_dssp CSCCCSSCCCSCEEEE-ETTEEEEECGGG------------T------------------TCEEEEETTSSSCCEEECCC
T ss_pred CCCCCCccccceEEEE-ECCEEEEEeCcC------------C------------------CeEEEEccccCCCCeeECCC
Confidence 3556666667788877 799999999964 1 016789998 499999998
Q ss_pred CC-CcccccCeecCCCcEEEEcCC-C--CC----CCeEEEEeCCCCCCeecCCCccc-cccccceEEEccCCcEEEEcCC
Q 048136 118 IT-DTWCSSGGLDVNGNLISTGGF-L--GG----SRTTRYLWGCPTCDWTEYPTALK-DGRWYATQALLADGSFLIFGGR 188 (559)
Q Consensus 118 ~~-~~~c~~~~~l~dG~i~v~GG~-~--~g----~~~v~~ydp~~t~~W~~~~~~m~-~~R~y~s~~~L~dG~VyvvGG~ 188 (559)
++ ..++..++++.+++|||+||. . ++ .+++++|||. +++|+++++ |. .+|..++++++ +++|||+||.
T Consensus 51 ~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~-~~~W~~~~~-~~p~~r~~~~~~~~-~~~iyv~GG~ 127 (357)
T 2uvk_A 51 FPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPK-TNSWVKLMS-HAPMGMAGHVTFVH-NGKAYVTGGV 127 (357)
T ss_dssp CTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETT-TTEEEECSC-CCSSCCSSEEEEEE-TTEEEEEECC
T ss_pred CCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCC-CCcEEECCC-CCCcccccceEEEE-CCEEEEEeCc
Confidence 88 678877888889999999998 2 11 4789999999 999999986 88 99999988886 8999999997
Q ss_pred CC--------------------------------------CceeEE-cCCCCCCCcceeccccccccccccCCccceEEE
Q 048136 189 DS--------------------------------------FSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYL 229 (559)
Q Consensus 189 ~~--------------------------------------~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~ 229 (559)
+. ..+|+| |.++ .|....++...+ .+.+.++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~---~W~~~~~~p~~~-------~~~~~~~ 197 (357)
T 2uvk_A 128 NQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQ---QWSYAGESPWYG-------TAGAAVV 197 (357)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTT---EEEEEEECSSCC-------CBSCEEE
T ss_pred CCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCC---cEEECCCCCCCC-------cccccEE
Confidence 52 468899 8876 588776664322 2324556
Q ss_pred eeCCcEEEEecC--------cEEEeeC--CCCeEEEECCCCCCCCCcccCCCceeecccccccccccccCcEEEEEcCCC
Q 048136 230 VPDGNLYIFANN--------RSILLDP--RANYVLREYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSV 299 (559)
Q Consensus 230 l~~G~iyv~Gg~--------~~e~yDp--~t~~W~~~~p~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~ 299 (559)
..+++||++||. .+++||+ .+++|+ .+++||.. +. +.++++.+ .+++||++||..
T Consensus 198 ~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~-~~~~~~~~-~~--~~~~~~~~-----------~~~~iyv~GG~~ 262 (357)
T 2uvk_A 198 NKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWN-KLAPVSSP-DG--VAGGFAGI-----------SNDSLIFAGGAG 262 (357)
T ss_dssp EETTEEEEECCEEETTEECCCEEEEECC---CEEE-ECCCSSTT-TC--CBSCEEEE-----------ETTEEEEECCEE
T ss_pred EECCEEEEEeeecCCCcccCceEEEEecCCCCcEE-ecCCCCCC-cc--cccceEEE-----------ECCEEEEEcCcc
Confidence 679999999983 4677875 999999 58887642 21 22333322 489999999964
Q ss_pred Ccccccccccc-----ccccccCceEEEEecCCCCceeee-cCCCCcccccEEEeeCCeEEEEcCcCCCCCCccCCCCCC
Q 048136 300 PEAFYFGEVEK-----RLVPALDDCARMVVTSPDPVWTTE-KMPTPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPC 373 (559)
Q Consensus 300 ~~~~~~~~~~~-----~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~ 373 (559)
..........+ .....+.++++||+.. ++|+.. +||.+|..+.+ ++.+++|||+||.+.. ....
T Consensus 263 ~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~--~~W~~~~~~p~~r~~~~~-~~~~~~i~v~GG~~~~-------~~~~ 332 (357)
T 2uvk_A 263 FKGSRENYQNGKNYAHEGLKKSYSTDIHLWHN--GKWDKSGELSQGRAYGVS-LPWNNSLLIIGGETAG-------GKAV 332 (357)
T ss_dssp CTTHHHHHHTTCSSTTTTCCCEECCEEEECC-----CEEEEECSSCCBSSEE-EEETTEEEEEEEECGG-------GCEE
T ss_pred ccCCcccccccceeccccccceeeEEEEecCC--CceeeCCCCCCCccccee-EEeCCEEEEEeeeCCC-------CCEe
Confidence 21100000000 0012245789999985 899998 99999999865 5569999999997621 1123
Q ss_pred cccEEEeCCCCCCCeEEecCCCC
Q 048136 374 FKPLLYKPSKPPGSRFTELAPSD 396 (559)
Q Consensus 374 ~~~e~YDP~t~~g~~Wt~~~~~~ 396 (559)
.++++|+-+++ +|.++.+.+
T Consensus 333 ~~v~~l~~~~~---~~~~~~~~~ 352 (357)
T 2uvk_A 333 TDSVLITVKDN---KVTVQNLEH 352 (357)
T ss_dssp EEEEEEEC-CC---SCEEEC---
T ss_pred eeEEEEEEcCc---EeEeeeccc
Confidence 47899999999 999876654
No 15
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.97 E-value=2.6e-29 Score=256.83 Aligned_cols=250 Identities=12% Similarity=0.073 Sum_probs=188.0
Q ss_pred CCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCcc--ccccccceEEEccCCcEEEEcCCC----C------CceeEE-c
Q 048136 131 NGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTAL--KDGRWYATQALLADGSFLIFGGRD----S------FSYEYI-P 197 (559)
Q Consensus 131 dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m--~~~R~y~s~~~L~dG~VyvvGG~~----~------~s~E~y-P 197 (559)
...||++|| +++++|||. +++|.. ++ | +.+|..++++++ +++|||+||.. . ..+++| |
T Consensus 4 ~~~l~~~GG-----~~~~~yd~~-~~~W~~-~~-~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~ 74 (315)
T 4asc_A 4 QDLIFMISE-----EGAVAYDPA-ANECYC-AS-LSSQVPKNHVSLVTK-ENQVFVAGGLFYNEDNKEDPMSAYFLQFDH 74 (315)
T ss_dssp EEEEEEEET-----TEEEEEETT-TTEEEE-EE-CCCCSCSSEEEEECT-TCCEEEEEEEEECSSCSSSCEEEEEEEEET
T ss_pred ceEEEEEcC-----CceEEECCC-CCeEec-CC-CCCCCCccceEEEEE-CCEEEEEcCcccCCCCCccccccceEEecC
Confidence 457899998 479999999 999987 43 6 458999988877 89999999951 1 126778 8
Q ss_pred CCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEec----------CcEEEeeCCCCeEEEECCCCCCCCCcc
Q 048136 198 AERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN----------NRSILLDPRANYVLREYPPLPGGARNY 267 (559)
Q Consensus 198 ~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg----------~~~e~yDp~t~~W~~~~p~mp~~~~~~ 267 (559)
.++ .|....++...+ .. +..+..+++||++|| +++++||+.+++|+ .+++||.
T Consensus 75 ~~~---~W~~~~~~p~~r-------~~-~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~-~~~~~p~----- 137 (315)
T 4asc_A 75 LDS---EWLGMPPLPSPR-------CL-FGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWG-ESDPLPY----- 137 (315)
T ss_dssp TTT---EEEECCCBSSCE-------ES-CEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEE-ECCCCSS-----
T ss_pred CCC---eEEECCCCCcch-------hc-eeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEe-ECCCCCC-----
Confidence 776 587766665432 33 345566999999999 24899999999999 6888884
Q ss_pred cCCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeee-cCCCCcccccEE
Q 048136 268 PSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTE-KMPTPRVMSDGV 346 (559)
Q Consensus 268 p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~av 346 (559)
+|.++++++ ++++||++||...+. ..++++++||+.. ++|+.. +||.+|..+.+
T Consensus 138 ~r~~~~~~~-----------~~~~iyv~GG~~~~~-----------~~~~~~~~yd~~~--~~W~~~~~~p~~r~~~~~- 192 (315)
T 4asc_A 138 VVYGHTVLS-----------HMDLVYVIGGKGSDR-----------KCLNKMCVYDPKK--FEWKELAPMQTARSLFGA- 192 (315)
T ss_dssp CCBSCEEEE-----------ETTEEEEECCBCTTS-----------CBCCCEEEEETTT--TEEEECCCCSSCCBSCEE-
T ss_pred cccceeEEE-----------ECCEEEEEeCCCCCC-----------cccceEEEEeCCC--CeEEECCCCCCchhceEE-
Confidence 233444432 489999999984221 3467899999985 899998 99999999965
Q ss_pred EeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCccceeeeEECCCCceEEeCCCCCCCCcc
Q 048136 347 LLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANLLPDGRVFVGGSNDNDGYQE 426 (559)
Q Consensus 347 ~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~llpdG~Vlv~GG~~~~~~~~ 426 (559)
++.+++|||+||.... .....+++|||+++ +|+.+++|+.+|..|+++++ +++||++||...... .
T Consensus 193 ~~~~~~iyv~GG~~~~--------~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~-~ 258 (315)
T 4asc_A 193 TVHDGRIIVAAGVTDT--------GLTSSAEVYSITDN---KWAPFEAFPQERSSLSLVSL--VGTLYAIGGFATLET-E 258 (315)
T ss_dssp EEETTEEEEEEEECSS--------SEEEEEEEEETTTT---EEEEECCCSSCCBSCEEEEE--TTEEEEEEEEEEEEC-T
T ss_pred EEECCEEEEEeccCCC--------CccceEEEEECCCC---eEEECCCCCCcccceeEEEE--CCEEEEECCccccCc-C
Confidence 5559999999997521 12347999999999 99999999999999987777 999999999642100 0
Q ss_pred cCCC--CCcceeeEEcCCCCC
Q 048136 427 WAKF--PTELRLEKFSPPYLA 445 (559)
Q Consensus 427 ~~~~--~~~~~~E~y~Ppyl~ 445 (559)
++.+ .....+|+|+|..-.
T Consensus 259 ~~~~~~~~~~~v~~yd~~~~~ 279 (315)
T 4asc_A 259 SGELVPTELNDIWRYNEEEKK 279 (315)
T ss_dssp TSCEEEEEEEEEEEEETTTTE
T ss_pred CccccccccCcEEEecCCCCh
Confidence 0110 013479999998753
No 16
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.96 E-value=9.2e-29 Score=253.12 Aligned_cols=250 Identities=13% Similarity=0.095 Sum_probs=186.8
Q ss_pred CCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccc--cccccceEEEccCCcEEEEcCCC----C------CceeEE-c
Q 048136 131 NGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALK--DGRWYATQALLADGSFLIFGGRD----S------FSYEYI-P 197 (559)
Q Consensus 131 dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~--~~R~y~s~~~L~dG~VyvvGG~~----~------~s~E~y-P 197 (559)
++.||++||. .+++|||. +++|... + |+ .+|..++++++ +++|||+||.. . ..+++| |
T Consensus 15 ~~~i~~~GG~-----~~~~yd~~-~~~W~~~-~-~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~ 85 (318)
T 2woz_A 15 KDLILLVNDT-----AAVAYDPM-ENECYLT-A-LAEQIPRNHSSIVTQ-QNQVYVVGGLYVDEENKDQPLQSYFFQLDN 85 (318)
T ss_dssp EEEEEEECSS-----EEEEEETT-TTEEEEE-E-ECTTSCSSEEEEECS-SSCEEEEESSCC-------CCCBEEEEEET
T ss_pred cchhhhcccc-----ceEEECCC-CCceecc-c-CCccCCccceEEEEE-CCEEEEECCcccCccccCCCccccEEEEeC
Confidence 5689999995 48999999 9999984 3 54 68988887766 89999999952 1 126778 8
Q ss_pred CCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEecC---------cEEEeeCCCCeEEEECCCCCCCCCccc
Q 048136 198 AERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFANN---------RSILLDPRANYVLREYPPLPGGARNYP 268 (559)
Q Consensus 198 ~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg~---------~~e~yDp~t~~W~~~~p~mp~~~~~~p 268 (559)
.++ .|....++...+ .+ +..++.+++||++||. ++++||+.+++|+ .+++||. +
T Consensus 86 ~~~---~W~~~~~~p~~r-------~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~-----~ 148 (318)
T 2woz_A 86 VSS---EWVGLPPLPSAR-------CL-FGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWS-EVKNLPI-----K 148 (318)
T ss_dssp TTT---EEEECSCBSSCB-------CS-CEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEE-EECCCSS-----C
T ss_pred CCC---cEEECCCCCccc-------cc-cceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEe-ECCCCCC-----c
Confidence 775 587766665432 33 3455669999999983 4899999999999 5888874 2
Q ss_pred CCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeee-cCCCCcccccEEE
Q 048136 269 STSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTE-KMPTPRVMSDGVL 347 (559)
Q Consensus 269 ~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~av~ 347 (559)
+.++++++ .+++||++||...+. ..++++++||+.. ++|+.. +|+.+|..+++ +
T Consensus 149 r~~~~~~~-----------~~~~iyv~GG~~~~~-----------~~~~~~~~yd~~~--~~W~~~~~~p~~r~~~~~-~ 203 (318)
T 2woz_A 149 VYGHNVIS-----------HNGMIYCLGGKTDDK-----------KCTNRVFIYNPKK--GDWKDLAPMKTPRSMFGV-A 203 (318)
T ss_dssp EESCEEEE-----------ETTEEEEECCEESSS-----------CBCCCEEEEETTT--TEEEEECCCSSCCBSCEE-E
T ss_pred ccccEEEE-----------ECCEEEEEcCCCCCC-----------CccceEEEEcCCC--CEEEECCCCCCCcccceE-E
Confidence 23444432 489999999974221 2467899999985 899998 99999999965 5
Q ss_pred eeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCccceeeeEECCCCceEEeCCCCCCCCccc
Q 048136 348 LPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANLLPDGRVFVGGSNDNDGYQEW 427 (559)
Q Consensus 348 LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~llpdG~Vlv~GG~~~~~~~~~ 427 (559)
+.+++|||+||.... .....+++|||+++ +|+.+++++.+|..|+++++ +++||++||...... .+
T Consensus 204 ~~~~~iyv~GG~~~~--------~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~-~~ 269 (318)
T 2woz_A 204 IHKGKIVIAGGVTED--------GLSASVEAFDLKTN---KWEVMTEFPQERSSISLVSL--AGSLYAIGGFAMIQL-ES 269 (318)
T ss_dssp EETTEEEEEEEEETT--------EEEEEEEEEETTTC---CEEECCCCSSCCBSCEEEEE--TTEEEEECCBCCBC----
T ss_pred EECCEEEEEcCcCCC--------CccceEEEEECCCC---eEEECCCCCCcccceEEEEE--CCEEEEECCeeccCC-CC
Confidence 569999999997521 12347899999999 99999999999999987776 999999999653210 00
Q ss_pred CCC--CCcceeeEEcCCCCC
Q 048136 428 AKF--PTELRLEKFSPPYLA 445 (559)
Q Consensus 428 ~~~--~~~~~~E~y~Ppyl~ 445 (559)
++. .....+++|+|....
T Consensus 270 ~~~~~~~~~~v~~yd~~~~~ 289 (318)
T 2woz_A 270 KEFAPTEVNDIWKYEDDKKE 289 (318)
T ss_dssp -CCBCCBCCCEEEEETTTTE
T ss_pred ceeccceeeeEEEEeCCCCE
Confidence 110 013479999998754
No 17
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.94 E-value=1.3e-25 Score=254.29 Aligned_cols=260 Identities=13% Similarity=0.087 Sum_probs=183.1
Q ss_pred EEeCccCCCcccccCeecCCCcEEEEcCCCC-CCCeEEEEeCCCCCCeecCC-C----ccccccccceEEEcc-CCcEEE
Q 048136 112 VTPLKVITDTWCSSGGLDVNGNLISTGGFLG-GSRTTRYLWGCPTCDWTEYP-T----ALKDGRWYATQALLA-DGSFLI 184 (559)
Q Consensus 112 w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~-g~~~v~~ydp~~t~~W~~~~-~----~m~~~R~y~s~~~L~-dG~Vyv 184 (559)
|...+..+..+. +++++.+++||++||... ..+++++|||. +++|+.++ + .|+.+|++|+++++. +|+|||
T Consensus 379 ~~~~~~~p~rr~-g~~~~~~~~iyv~GG~~~~~~~~v~~yd~~-~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv 456 (695)
T 2zwa_A 379 LLECECPINRKF-GDVDVAGNDVFYMGGSNPYRVNEILQLSIH-YDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLL 456 (695)
T ss_dssp EEECCCTTCCBS-CEEEECSSCEEEECCBSSSBCCCEEEEEEC-SSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEE
T ss_pred EeccCCCCCCce-eEEEEECCEEEEECCCCCCCcCcEEEEECC-CCeEEEeccCCCCCCCCccccceEEEEEccCCEEEE
Confidence 443333333333 344558999999999743 24689999999 99999886 3 388999999999886 899999
Q ss_pred EcCCCC-----CceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEecC----cEEEeeCCCCeEE
Q 048136 185 FGGRDS-----FSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFANN----RSILLDPRANYVL 254 (559)
Q Consensus 185 vGG~~~-----~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg~----~~e~yDp~t~~W~ 254 (559)
+||.+. .++++| +.++ .|....++...+ .++.++++.+|+||++||. ++++||+.+++|+
T Consensus 457 ~GG~~~~~~~~~dv~~yd~~t~---~W~~~~~~p~~R-------~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~ 526 (695)
T 2zwa_A 457 IGGRKAPHQGLSDNWIFDMKTR---EWSMIKSLSHTR-------FRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFK 526 (695)
T ss_dssp ECCBSSTTCBCCCCEEEETTTT---EEEECCCCSBCC-------BSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEE
T ss_pred EcCCCCCCCccccEEEEeCCCC---cEEECCCCCCCc-------ccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceE
Confidence 999764 358899 8876 588777765442 4555544459999999996 6999999999999
Q ss_pred EECCC---CCCCCCcccCCCce-eecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCc
Q 048136 255 REYPP---LPGGARNYPSTSTS-VLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPV 330 (559)
Q Consensus 255 ~~~p~---mp~~~~~~p~~g~~-v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~ 330 (559)
.+++ +| .++.+++ +++.. ..++||++||..... ...++++++||+.. ++
T Consensus 527 -~~~~~g~~p-----~~r~~~~a~v~~~---------~~~~iyv~GG~~~~~----------~~~~~~v~~yd~~~--~~ 579 (695)
T 2zwa_A 527 -DVTPKDEFF-----QNSLVSAGLEFDP---------VSKQGIILGGGFMDQ----------TTVSDKAIIFKYDA--EN 579 (695)
T ss_dssp -ECCCSSGGG-----GSCCBSCEEEEET---------TTTEEEEECCBCTTS----------SCBCCEEEEEEECT--TC
T ss_pred -EccCCCCCC-----CcccceeEEEEeC---------CCCEEEEECCcCCCC----------CeeeCcEEEEEccC--Cc
Confidence 5765 44 3444444 33210 128999999975321 02457899999986 67
Q ss_pred ------eeee-cC-CCCcccccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCC-----
Q 048136 331 ------WTTE-KM-PTPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDI----- 397 (559)
Q Consensus 331 ------W~~~-~M-~~~R~~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~----- 397 (559)
|+.. +| +.+|..++++++-+|+|||+||... .. .......+++|||+++ +|+.+. ++.
T Consensus 580 w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~-~~----~~~~~~~v~~yd~~t~---~W~~~~-~p~~~~~~ 650 (695)
T 2zwa_A 580 ATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSP-SG----LFDRTNSIISLDPLSE---TLTSIP-ISRRIWED 650 (695)
T ss_dssp SSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCS-SC----CCCTTTSEEEEETTTT---EEEECC-CCHHHHHH
T ss_pred cccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccC-CC----CCCCCCeEEEEECCCC---eEEEee-ccccccCC
Confidence 8887 76 5899999766554499999999752 11 0123457999999999 999642 221
Q ss_pred ---CccceeeeEECCCCceEEeCCCC
Q 048136 398 ---PRMYHSVANLLPDGRVFVGGSND 420 (559)
Q Consensus 398 ---~R~yhs~a~llpdG~Vlv~GG~~ 420 (559)
.|..|+ ++++.||+|||+||..
T Consensus 651 ~~p~~~gh~-~~~~~~g~i~v~GGg~ 675 (695)
T 2zwa_A 651 HSLMLAGFS-LVSTSMGTIHIIGGGA 675 (695)
T ss_dssp SCCCCSSCE-EECC---CEEEECCEE
T ss_pred CCccceeee-EEEeCCCEEEEEeCCc
Confidence 244575 5566788999999963
No 18
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.92 E-value=2e-24 Score=244.65 Aligned_cols=257 Identities=13% Similarity=0.113 Sum_probs=179.8
Q ss_pred CcEEecCCCCCcceeEEEeecCCCeEEEEecccccccCCCCCCCCCCCCccccccccccCCccceeeEEEeCCCCCEEeC
Q 048136 36 GKWELLPNNPGISAMHSVLLPNVDEMVIFDATVWQISRLPLPDYKRPCPMHQNKATNVTNIDCWCHSVFYNVNTLQVTPL 115 (559)
Q Consensus 36 g~W~~~~~~~~~~~~h~~~~~~~gkv~~~gg~~~~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yDp~t~~w~~~ 115 (559)
-+|......+..+..|+++ .+++||++||.+. . + ...+.+||+.+++|+.+
T Consensus 377 ~~~~~~~~~p~rr~g~~~~--~~~~iyv~GG~~~---~----------~--------------~~~v~~yd~~~~~W~~~ 427 (695)
T 2zwa_A 377 YQLLECECPINRKFGDVDV--AGNDVFYMGGSNP---Y----------R--------------VNEILQLSIHYDKIDMK 427 (695)
T ss_dssp EEEEECCCTTCCBSCEEEE--CSSCEEEECCBSS---S----------B--------------CCCEEEEEECSSCEEEE
T ss_pred eeEeccCCCCCCceeEEEE--ECCEEEEECCCCC---C----------C--------------cCcEEEEECCCCeEEEe
Confidence 3466554444344444444 6899999999751 1 0 12278999999999998
Q ss_pred c-c-----CCCcccccCeecC--CCcEEEEcCCCCC---CCeEEEEeCCCCCCeecCCCccccccccceEEEccCCcEEE
Q 048136 116 K-V-----ITDTWCSSGGLDV--NGNLISTGGFLGG---SRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGSFLI 184 (559)
Q Consensus 116 ~-~-----~~~~~c~~~~~l~--dG~i~v~GG~~~g---~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~Vyv 184 (559)
+ . ++..++.++++.. +|+||++||.... .+++++||+. +++|+.+++ |+.+|++|+++++.+|+|||
T Consensus 428 ~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~-t~~W~~~~~-~p~~R~~h~~~~~~~~~iyv 505 (695)
T 2zwa_A 428 NIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMK-TREWSMIKS-LSHTRFRHSACSLPDGNVLI 505 (695)
T ss_dssp ECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETT-TTEEEECCC-CSBCCBSCEEEECTTSCEEE
T ss_pred ccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCC-CCcEEECCC-CCCCcccceEEEEcCCEEEE
Confidence 7 4 4555655556666 9999999998532 4789999999 999999986 99999999999877999999
Q ss_pred EcCCCCC-ceeEE-cCCCCCCCcceecc---ccccccccccCCccceEEEee-C-CcEEEEecC---------cEEEeeC
Q 048136 185 FGGRDSF-SYEYI-PAERTENAYSIPFQ---FLRDTYDVLENNLYPFVYLVP-D-GNLYIFANN---------RSILLDP 248 (559)
Q Consensus 185 vGG~~~~-s~E~y-P~~~~~~~w~~~~p---~l~~~~d~~~~~~yp~~~~l~-~-G~iyv~Gg~---------~~e~yDp 248 (559)
+||.+.. ++|+| |.++ .|....+ +... +..+.++++- + |+||++||. ++++||+
T Consensus 506 ~GG~~~~~~v~~yd~~t~---~W~~~~~~g~~p~~-------r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~ 575 (695)
T 2zwa_A 506 LGGVTEGPAMLLYNVTEE---IFKDVTPKDEFFQN-------SLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKY 575 (695)
T ss_dssp ECCBCSSCSEEEEETTTT---EEEECCCSSGGGGS-------CCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEE
T ss_pred ECCCCCCCCEEEEECCCC---ceEEccCCCCCCCc-------ccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEc
Confidence 9998653 68999 8876 5876554 3322 2344433322 2 899999984 4899999
Q ss_pred CCCe------EEEECCCCCCCCCcccCCCceeecccccccccccccC-cEEEEEcCCCCccccccccccccccccCceEE
Q 048136 249 RANY------VLREYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVD-AEVLICGGSVPEAFYFGEVEKRLVPALDDCAR 321 (559)
Q Consensus 249 ~t~~------W~~~~p~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~-gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~ 321 (559)
.+++ |+ .++++|. .+|.++++.+ ++ ++||++||.+.... ....+++++
T Consensus 576 ~~~~w~~~~~W~-~~~~~p~----~~R~~~~~~~-----------~~~~~iyv~GG~~~~~~---------~~~~~~v~~ 630 (695)
T 2zwa_A 576 DAENATEPITVI-KKLQHPL----FQRYGSQIKY-----------ITPRKLLIVGGTSPSGL---------FDRTNSIIS 630 (695)
T ss_dssp CTTCSSCCEEEE-EEEECGG----GCCBSCEEEE-----------EETTEEEEECCBCSSCC---------CCTTTSEEE
T ss_pred cCCccccceEEE-EcCCCCC----CCcccceEEE-----------eCCCEEEEECCccCCCC---------CCCCCeEEE
Confidence 9999 77 4655431 3344444332 35 99999999753210 024678999
Q ss_pred EEecCCCCceeeecCCC--------CcccccEEEeeCCeEEEEcCcC
Q 048136 322 MVVTSPDPVWTTEKMPT--------PRVMSDGVLLPTGDVLLINGAE 360 (559)
Q Consensus 322 ~d~~~~~~~W~~~~M~~--------~R~~~~av~LpdG~V~vvGG~~ 360 (559)
||+.. ++|+..+++. .|..|+++++.+|+|||+||..
T Consensus 631 yd~~t--~~W~~~~~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg~ 675 (695)
T 2zwa_A 631 LDPLS--ETLTSIPISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGGA 675 (695)
T ss_dssp EETTT--TEEEECCCCHHHHHHSCCCCSSCEEECC---CEEEECCEE
T ss_pred EECCC--CeEEEeeccccccCCCCccceeeeEEEeCCCEEEEEeCCc
Confidence 99985 8999655543 2455767777777999999964
No 19
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.10 E-value=0.0022 Score=64.41 Aligned_cols=244 Identities=9% Similarity=0.024 Sum_probs=130.9
Q ss_pred eEEEeCCCCCEEeCccC--CCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCcccc-ccccceEEEcc
Q 048136 102 SVFYNVNTLQVTPLKVI--TDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKD-GRWYATQALLA 178 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~--~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~-~R~y~s~~~L~ 178 (559)
+.+||..+++......+ +...........++.+++.|+.. ..+++||.. +.+-... +.. .....+.+.-+
T Consensus 60 v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D---~~i~lWd~~-~~~~~~~---~~~~~~~~~~~~~sp 132 (321)
T 3ow8_A 60 VKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLD---AHIRLWDLE-NGKQIKS---IDAGPVDAWTLAFSP 132 (321)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETT---SEEEEEETT-TTEEEEE---EECCTTCCCCEEECT
T ss_pred EEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCC---CcEEEEECC-CCCEEEE---EeCCCccEEEEEECC
Confidence 56777766554322111 22212223345688899998873 589999987 5543221 111 11123456677
Q ss_pred CCcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEec--CcEEEeeCCCCeEEE
Q 048136 179 DGSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN--NRSILLDPRANYVLR 255 (559)
Q Consensus 179 dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg--~~~e~yDp~t~~W~~ 255 (559)
||+.++.|+.++ .+.+| ...++ ....+.... ..-..+...++|+.++.|+ ..+.+||.++++-..
T Consensus 133 dg~~l~~g~~dg-~v~i~~~~~~~-----~~~~~~~~~------~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~ 200 (321)
T 3ow8_A 133 DSQYLATGTHVG-KVNIFGVESGK-----KEYSLDTRG------KFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLH 200 (321)
T ss_dssp TSSEEEEECTTS-EEEEEETTTCS-----EEEEEECSS------SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCCEEEEEcCCC-cEEEEEcCCCc-----eeEEecCCC------ceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEE
Confidence 999999998764 45666 33321 111111100 0111234457999999886 458899999887554
Q ss_pred ECCCCCCCCCcccCCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeee-
Q 048136 256 EYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTE- 334 (559)
Q Consensus 256 ~~p~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~- 334 (559)
.+.. ...+ -.++.+ . .+++++++|+.+. .+..+|+.. ......
T Consensus 201 ~~~~-----h~~~--v~~l~~--s--------pd~~~l~s~s~dg-----------------~i~iwd~~~--~~~~~~~ 244 (321)
T 3ow8_A 201 TLEG-----HAMP--IRSLTF--S--------PDSQLLVTASDDG-----------------YIKIYDVQH--ANLAGTL 244 (321)
T ss_dssp EECC-----CSSC--CCEEEE--C--------TTSCEEEEECTTS-----------------CEEEEETTT--CCEEEEE
T ss_pred EEcc-----cCCc--eeEEEE--c--------CCCCEEEEEcCCC-----------------eEEEEECCC--cceeEEE
Confidence 3321 0111 112211 1 2678889988652 344555542 111111
Q ss_pred cCCCCcccccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEE-ecCCCCCCccceeeeEECCCCce
Q 048136 335 KMPTPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFT-ELAPSDIPRMYHSVANLLPDGRV 413 (559)
Q Consensus 335 ~M~~~R~~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt-~~~~~~~~R~yhs~a~llpdG~V 413 (559)
.-....... ...-|||+.++.|+.+ + ++.+||..+. +-. .+... ... -....+.|||+.
T Consensus 245 ~~h~~~v~~-~~~sp~~~~l~s~s~D-~------------~v~iwd~~~~---~~~~~~~~h-~~~--v~~v~~s~~g~~ 304 (321)
T 3ow8_A 245 SGHASWVLN-VAFCPDDTHFVSSSSD-K------------SVKVWDVGTR---TCVHTFFDH-QDQ--VWGVKYNGNGSK 304 (321)
T ss_dssp CCCSSCEEE-EEECTTSSEEEEEETT-S------------CEEEEETTTT---EEEEEECCC-SSC--EEEEEECTTSSE
T ss_pred cCCCCceEE-EEECCCCCEEEEEeCC-C------------cEEEEeCCCC---EEEEEEcCC-CCc--EEEEEECCCCCE
Confidence 111122222 3455899999998765 1 6889998776 422 22111 111 123456799999
Q ss_pred EEeCCCC
Q 048136 414 FVGGSND 420 (559)
Q Consensus 414 lv~GG~~ 420 (559)
++.||.+
T Consensus 305 l~s~~~d 311 (321)
T 3ow8_A 305 IVSVGDD 311 (321)
T ss_dssp EEEEETT
T ss_pred EEEEeCC
Confidence 9998864
No 20
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.09 E-value=0.0047 Score=60.88 Aligned_cols=247 Identities=9% Similarity=0.025 Sum_probs=129.4
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCcccccc-ccceEEEccCC
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGR-WYATQALLADG 180 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R-~y~s~~~L~dG 180 (559)
..+||..+++....-..+..........++|+++++|+.. ..+++||.. +.+-.. . +.... .-.+....+++
T Consensus 47 i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---~~i~vwd~~-~~~~~~--~-~~~~~~~v~~~~~~~~~ 119 (312)
T 4ery_A 47 IKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDD---KTLKIWDVS-SGKCLK--T-LKGHSNYVFCCNFNPQS 119 (312)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT---SEEEEEETT-TCCEEE--E-EECCSSCEEEEEECSSS
T ss_pred EEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCC---CEEEEEECC-CCcEEE--E-EcCCCCCEEEEEEcCCC
Confidence 5788888777655433333333334556799999999873 589999987 554321 1 22111 12234456688
Q ss_pred cEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEec--CcEEEeeCCCCeEEEEC
Q 048136 181 SFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN--NRSILLDPRANYVLREY 257 (559)
Q Consensus 181 ~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg--~~~e~yDp~t~~W~~~~ 257 (559)
+.++.|+.++ .+.+| ..+++ ....+ .... ..--.+...++|++++.|+ ..+.+||..+++....+
T Consensus 120 ~~l~s~~~d~-~i~iwd~~~~~-----~~~~~-~~~~-----~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~ 187 (312)
T 4ery_A 120 NLIVSGSFDE-SVRIWDVKTGK-----CLKTL-PAHS-----DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 187 (312)
T ss_dssp SEEEEEETTS-CEEEEETTTCC-----EEEEE-CCCS-----SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred CEEEEEeCCC-cEEEEECCCCE-----EEEEe-cCCC-----CcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEE
Confidence 9999988764 46677 44321 11111 1100 0011223346899888886 35889999887655333
Q ss_pred CCCCCCCCcccCCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeeec-C
Q 048136 258 PPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTEK-M 336 (559)
Q Consensus 258 p~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~-M 336 (559)
..- ...+ -..+. .. .+++.+++|+.++ .+..||+........... .
T Consensus 188 ~~~----~~~~--~~~~~--~~--------~~~~~l~~~~~d~-----------------~i~iwd~~~~~~~~~~~~~~ 234 (312)
T 4ery_A 188 IDD----DNPP--VSFVK--FS--------PNGKYILAATLDN-----------------TLKLWDYSKGKCLKTYTGHK 234 (312)
T ss_dssp CCS----SCCC--EEEEE--EC--------TTSSEEEEEETTT-----------------EEEEEETTTTEEEEEECSSC
T ss_pred ecc----CCCc--eEEEE--EC--------CCCCEEEEEcCCC-----------------eEEEEECCCCcEEEEEEecC
Confidence 110 0100 01111 11 2677788877542 234455442100001111 1
Q ss_pred CCCcccccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeE-EecCCCCCCccceeeeEECCCCceEE
Q 048136 337 PTPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRF-TELAPSDIPRMYHSVANLLPDGRVFV 415 (559)
Q Consensus 337 ~~~R~~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W-t~~~~~~~~R~yhs~a~llpdG~Vlv 415 (559)
............++++.++.|+.+ | .+.+||..+. +- ..+... .... ......|++++++
T Consensus 235 ~~~~~~~~~~~~~~~~~l~sg~~d-g------------~i~vwd~~~~---~~~~~~~~h-~~~v--~~~~~~p~~~~l~ 295 (312)
T 4ery_A 235 NEKYCIFANFSVTGGKWIVSGSED-N------------LVYIWNLQTK---EIVQKLQGH-TDVV--ISTACHPTENIIA 295 (312)
T ss_dssp CSSSCCCEEEECSSSCEEEECCTT-S------------CEEEEETTTC---CEEEEECCC-SSCE--EEEEECSSSSEEE
T ss_pred CceEEEEEEEEeCCCcEEEEECCC-C------------EEEEEECCCc---hhhhhhhcc-CCcE--EEEeecCcCCceE
Confidence 111111112344688888888765 2 6789998876 32 222211 1111 2345679999998
Q ss_pred eCCC
Q 048136 416 GGSN 419 (559)
Q Consensus 416 ~GG~ 419 (559)
.++.
T Consensus 296 s~~~ 299 (312)
T 4ery_A 296 SAAL 299 (312)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 8763
No 21
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.05 E-value=0.0014 Score=65.96 Aligned_cols=136 Identities=9% Similarity=0.015 Sum_probs=75.9
Q ss_pred eEEEeCCCCCEEeCccC--CCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccC
Q 048136 102 SVFYNVNTLQVTPLKVI--TDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLAD 179 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~--~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~d 179 (559)
..+||..++++..+... +..........++|+++++|+. + ..+.+||.. +.++............-.+++..++
T Consensus 32 v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-d--g~i~vwd~~-~~~~~~~~~~~~~~~~v~~~~~~~~ 107 (372)
T 1k8k_C 32 VHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGT-D--RNAYVWTLK-GRTWKPTLVILRINRAARCVRWAPN 107 (372)
T ss_dssp EEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEET-T--SCEEEEEEE-TTEEEEEEECCCCSSCEEEEEECTT
T ss_pred EEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcC-C--CeEEEEECC-CCeeeeeEEeecCCCceeEEEECCC
Confidence 67889888876554433 2222223445679999999886 3 478899987 6765543210122233334555678
Q ss_pred CcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEecC--cEEEeeCC
Q 048136 180 GSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFANN--RSILLDPR 249 (559)
Q Consensus 180 G~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg~--~~e~yDp~ 249 (559)
|+.+++|+.++ .+.+| ..... .+.....+..... ..-..+...++|++++.|+. .+.+||..
T Consensus 108 ~~~l~~~~~d~-~v~i~d~~~~~--~~~~~~~~~~~~~-----~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~ 172 (372)
T 1k8k_C 108 EKKFAVGSGSR-VISICYFEQEN--DWWVCKHIKKPIR-----STVLSLDWHPNSVLLAAGSCDFKCRIFSAY 172 (372)
T ss_dssp SSEEEEEETTS-SEEEEEEETTT--TEEEEEEECTTCC-----SCEEEEEECTTSSEEEEEETTSCEEEEECC
T ss_pred CCEEEEEeCCC-EEEEEEecCCC--cceeeeeeecccC-----CCeeEEEEcCCCCEEEEEcCCCCEEEEEcc
Confidence 99999988764 45566 33221 1211111111100 01112334568888888863 57889954
No 22
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.97 E-value=0.0042 Score=62.65 Aligned_cols=269 Identities=14% Similarity=0.041 Sum_probs=140.8
Q ss_pred eeEEEeCCCCCEEeCccC------CCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeec-CCCccccccccce
Q 048136 101 HSVFYNVNTLQVTPLKVI------TDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTE-YPTALKDGRWYAT 173 (559)
Q Consensus 101 ~~~~yDp~t~~w~~~~~~------~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~-~~~~m~~~R~y~s 173 (559)
...+||++|+++...-.. ...+. .+..+.++++|++... ...+.++|+. +.+-.. ++. ...++ .
T Consensus 18 ~l~~~d~~t~~~~~~i~~~~n~~~lg~~~-~~i~~~~~~lyv~~~~---~~~v~viD~~-t~~~~~~i~~-~~~p~---~ 88 (328)
T 3dsm_A 18 TLSYYDPATCEVENEVFYRANGFKLGDVA-QSMVIRDGIGWIVVNN---SHVIFAIDIN-TFKEVGRITG-FTSPR---Y 88 (328)
T ss_dssp EEEEEETTTTEEECSHHHHHHSSCCBSCE-EEEEEETTEEEEEEGG---GTEEEEEETT-TCCEEEEEEC-CSSEE---E
T ss_pred eEEEEECCCCEEhhhhHhhhcCcccCccc-eEEEEECCEEEEEEcC---CCEEEEEECc-ccEEEEEcCC-CCCCc---E
Confidence 378999999998753210 00111 1234467889988643 3689999998 666422 221 22232 3
Q ss_pred EEEccCCcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEe---cCcEEEeeCC
Q 048136 174 QALLADGSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFA---NNRSILLDPR 249 (559)
Q Consensus 174 ~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~G---g~~~e~yDp~ 249 (559)
.+.-+||++||....+ ..+.++ +++.+ -....+..... .....|...+..+++||+.. +..+.++|++
T Consensus 89 i~~~~~g~lyv~~~~~-~~v~~iD~~t~~---~~~~i~~g~~~----~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~ 160 (328)
T 3dsm_A 89 IHFLSDEKAYVTQIWD-YRIFIINPKTYE---ITGYIECPDMD----MESGSTEQMVQYGKYVYVNCWSYQNRILKIDTE 160 (328)
T ss_dssp EEEEETTEEEEEEBSC-SEEEEEETTTTE---EEEEEECTTCC----TTTCBCCCEEEETTEEEEEECTTCCEEEEEETT
T ss_pred EEEeCCCeEEEEECCC-CeEEEEECCCCe---EEEEEEcCCcc----ccCCCcceEEEECCEEEEEcCCCCCEEEEEECC
Confidence 4443689999987432 345566 65432 11111111100 00013333344789999985 4578999999
Q ss_pred CCeEEEECCCCCCCCCcccCCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCC
Q 048136 250 ANYVLREYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDP 329 (559)
Q Consensus 250 t~~W~~~~p~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~ 329 (559)
+++..+.++. . ..|. + .++- .+|++|++.-..... ..|......+.+||+.. .
T Consensus 161 t~~~~~~i~~-g----~~p~-~-i~~~-----------~dG~l~v~~~~~~~~-------~~~~~~~~~v~~id~~t--~ 213 (328)
T 3dsm_A 161 TDKVVDELTI-G----IQPT-S-LVMD-----------KYNKMWTITDGGYEG-------SPYGYEAPSLYRIDAET--F 213 (328)
T ss_dssp TTEEEEEEEC-S----SCBC-C-CEEC-----------TTSEEEEEBCCBCTT-------CSSCBCCCEEEEEETTT--T
T ss_pred CCeEEEEEEc-C----CCcc-c-eEEc-----------CCCCEEEEECCCccC-------CccccCCceEEEEECCC--C
Confidence 9987754432 1 1221 1 1111 268988876422100 00111235678888763 3
Q ss_pred ceeee-cCCCCcccccEEEeeCC-eEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCC-CccceeeeE
Q 048136 330 VWTTE-KMPTPRVMSDGVLLPTG-DVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDI-PRMYHSVAN 406 (559)
Q Consensus 330 ~W~~~-~M~~~R~~~~av~LpdG-~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~-~R~yhs~a~ 406 (559)
+.... .++....-...+.-||| ++|+.++ .+.+||+++. +.....-.+. .+.-.+ ..
T Consensus 214 ~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~----------------~v~~~d~~t~---~~~~~~~~~~~~~~p~g-i~ 273 (328)
T 3dsm_A 214 TVEKQFKFKLGDWPSEVQLNGTRDTLYWINN----------------DIWRMPVEAD---RVPVRPFLEFRDTKYYG-LT 273 (328)
T ss_dssp EEEEEEECCTTCCCEEEEECTTSCEEEEESS----------------SEEEEETTCS---SCCSSCSBCCCSSCEEE-EE
T ss_pred eEEEEEecCCCCCceeEEEecCCCEEEEEcc----------------EEEEEECCCC---ceeeeeeecCCCCceEE-EE
Confidence 44333 44433222223445555 5666543 3578999887 4422111111 122222 44
Q ss_pred ECC-CCceEEeCCCCCCCCcccCCCCCcceeeEEcCC
Q 048136 407 LLP-DGRVFVGGSNDNDGYQEWAKFPTELRLEKFSPP 442 (559)
Q Consensus 407 llp-dG~Vlv~GG~~~~~~~~~~~~~~~~~~E~y~Pp 442 (559)
+-| +|+|||+.... |....++.+|+|.
T Consensus 274 vdp~~g~lyva~~~~---------y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 274 VNPNNGEVYVADAID---------YQQQGIVYRYSPQ 301 (328)
T ss_dssp ECTTTCCEEEEECTT---------SSSEEEEEEECTT
T ss_pred EcCCCCeEEEEcccc---------cccCCEEEEECCC
Confidence 667 89999996321 1113478888876
No 23
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.92 E-value=0.005 Score=60.55 Aligned_cols=245 Identities=13% Similarity=0.055 Sum_probs=128.8
Q ss_pred eEEEeCCCCCEEe-Ccc----CCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccc-cccceEE
Q 048136 102 SVFYNVNTLQVTP-LKV----ITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDG-RWYATQA 175 (559)
Q Consensus 102 ~~~yDp~t~~w~~-~~~----~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~-R~y~s~~ 175 (559)
..+||..+++... +.. .+..........++|+.+++|+.. ..+.+||.. +.+...... +... ..-.+.+
T Consensus 74 i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~~~d~~-~~~~~~~~~-~~~~~~~i~~~~ 148 (337)
T 1gxr_A 74 VKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEA---STLSIWDLA-APTPRIKAE-LTSSAPACYALA 148 (337)
T ss_dssp EEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESS---SEEEEEECC-CC--EEEEE-EECSSSCEEEEE
T ss_pred EEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCC---CcEEEEECC-CCCcceeee-cccCCCceEEEE
Confidence 5678877654221 111 122222234556789999998762 589999988 665433221 2221 2223455
Q ss_pred EccCCcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEecC--cEEEeeCCCCe
Q 048136 176 LLADGSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFANN--RSILLDPRANY 252 (559)
Q Consensus 176 ~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg~--~~e~yDp~t~~ 252 (559)
..++|+.+++|+.++ .+.+| ..+. .....+ .... ..-..+...++|+.++.++. .+.+||.++++
T Consensus 149 ~~~~~~~l~~~~~dg-~v~~~d~~~~-----~~~~~~-~~~~-----~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~ 216 (337)
T 1gxr_A 149 ISPDSKVCFSCCSDG-NIAVWDLHNQ-----TLVRQF-QGHT-----DGASCIDISNDGTKLWTGGLDNTVRSWDLREGR 216 (337)
T ss_dssp ECTTSSEEEEEETTS-CEEEEETTTT-----EEEEEE-CCCS-----SCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred ECCCCCEEEEEeCCC-cEEEEeCCCC-----ceeeee-eccc-----CceEEEEECCCCCEEEEEecCCcEEEEECCCCc
Confidence 667899999988764 46667 4332 111111 1100 01112334568888888763 57899999886
Q ss_pred EEEECCCCCCCCCcccCCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCcee
Q 048136 253 VLREYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWT 332 (559)
Q Consensus 253 W~~~~p~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~ 332 (559)
-...+. .+. + -.++.+ . .+++.+++|+.+ ..+..||+... ....
T Consensus 217 ~~~~~~-~~~-----~--v~~~~~--s--------~~~~~l~~~~~~-----------------~~i~~~~~~~~-~~~~ 260 (337)
T 1gxr_A 217 QLQQHD-FTS-----Q--IFSLGY--C--------PTGEWLAVGMES-----------------SNVEVLHVNKP-DKYQ 260 (337)
T ss_dssp EEEEEE-CSS-----C--EEEEEE--C--------TTSSEEEEEETT-----------------SCEEEEETTSS-CEEE
T ss_pred eEeeec-CCC-----c--eEEEEE--C--------CCCCEEEEEcCC-----------------CcEEEEECCCC-CeEE
Confidence 553221 110 0 111111 1 267788887654 23445665431 1111
Q ss_pred eecCCCCcccccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCccceeeeEECCCCc
Q 048136 333 TEKMPTPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANLLPDGR 412 (559)
Q Consensus 333 ~~~M~~~R~~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~llpdG~ 412 (559)
..-....... ....+||+.+++++.+ | .+.+||..+. +-..... .... -....+.|||+
T Consensus 261 -~~~~~~~v~~-~~~~~~~~~l~~~~~d-g------------~i~~~~~~~~---~~~~~~~--~~~~-v~~~~~s~~~~ 319 (337)
T 1gxr_A 261 -LHLHESCVLS-LKFAYCGKWFVSTGKD-N------------LLNAWRTPYG---ASIFQSK--ESSS-VLSCDISVDDK 319 (337)
T ss_dssp -ECCCSSCEEE-EEECTTSSEEEEEETT-S------------EEEEEETTTC---CEEEEEE--CSSC-EEEEEECTTSC
T ss_pred -EcCCccceeE-EEECCCCCEEEEecCC-C------------cEEEEECCCC---eEEEEec--CCCc-EEEEEECCCCC
Confidence 1111222222 4566899999988754 1 6789998876 4322111 1111 12345779999
Q ss_pred eEEeCCCC
Q 048136 413 VFVGGSND 420 (559)
Q Consensus 413 Vlv~GG~~ 420 (559)
.+++|+..
T Consensus 320 ~l~~~~~d 327 (337)
T 1gxr_A 320 YIVTGSGD 327 (337)
T ss_dssp EEEEEETT
T ss_pred EEEEecCC
Confidence 99998864
No 24
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.91 E-value=0.0033 Score=63.33 Aligned_cols=247 Identities=15% Similarity=0.156 Sum_probs=126.2
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCC--eecCCCcccccc-ccceEEEcc
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCD--WTEYPTALKDGR-WYATQALLA 178 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~--W~~~~~~m~~~R-~y~s~~~L~ 178 (559)
..+||..+.+-...-..+..........++|+.+++||.. ..+++||.. +.+ ...... +.... .-.++...+
T Consensus 79 v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d---~~v~iw~~~-~~~~~~~~~~~-~~~h~~~v~~~~~~~ 153 (340)
T 1got_B 79 LIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLD---NICSIYNLK-TREGNVRVSRE-LAGHTGYLSCCRFLD 153 (340)
T ss_dssp EEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETT---CEEEEEETT-TCSBSCEEEEE-EECCSSCEEEEEEEE
T ss_pred EEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCC---CeEEEEECc-cCCCcceeEEE-ecCCCccEEEEEECC
Confidence 6788887766433222233322234566799999999873 578999986 432 111111 21111 112233344
Q ss_pred CCcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEec--CcEEEeeCCCCeEEE
Q 048136 179 DGSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN--NRSILLDPRANYVLR 255 (559)
Q Consensus 179 dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg--~~~e~yDp~t~~W~~ 255 (559)
+++ ++.|+.+ .++.+| ..++ .....+ .... ..-..+...++|++++.|+ ..+.+||..++.-..
T Consensus 154 ~~~-l~s~s~d-~~i~~wd~~~~-----~~~~~~-~~h~-----~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~ 220 (340)
T 1got_B 154 DNQ-IVTSSGD-TTCALWDIETG-----QQTTTF-TGHT-----GDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQ 220 (340)
T ss_dssp TTE-EEEEETT-SCEEEEETTTT-----EEEEEE-CCCS-----SCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEE
T ss_pred CCc-EEEEECC-CcEEEEECCCC-----cEEEEE-cCCC-----CceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEE
Confidence 666 4555544 356777 4432 111111 1110 0111234456899999886 468899998876443
Q ss_pred ECCCCCCCCCcccCCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeee-
Q 048136 256 EYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTE- 334 (559)
Q Consensus 256 ~~p~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~- 334 (559)
.+.. +...-.++.+ . .+++.+++|+.+. ++..+|+.. .+-...
T Consensus 221 ~~~~-------h~~~v~~v~~--~--------p~~~~l~s~s~d~-----------------~v~iwd~~~--~~~~~~~ 264 (340)
T 1got_B 221 TFTG-------HESDINAICF--F--------PNGNAFATGSDDA-----------------TCRLFDLRA--DQELMTY 264 (340)
T ss_dssp EECC-------CSSCEEEEEE--C--------TTSSEEEEEETTS-----------------CEEEEETTT--TEEEEEE
T ss_pred EEcC-------CcCCEEEEEE--c--------CCCCEEEEEcCCC-----------------cEEEEECCC--CcEEEEE
Confidence 3311 1000112211 1 2678888887652 344555542 111111
Q ss_pred cCCCCc-ccccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCccceeeeEECCCCce
Q 048136 335 KMPTPR-VMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANLLPDGRV 413 (559)
Q Consensus 335 ~M~~~R-~~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~llpdG~V 413 (559)
...... .-.+...-|+|+++++|+.+ + .+.+||..+.. .-..+.... .+. .+..+.|||+.
T Consensus 265 ~~~~~~~~v~~~~~s~~g~~l~~g~~d-~------------~i~vwd~~~~~--~~~~~~~h~-~~v--~~~~~s~dg~~ 326 (340)
T 1got_B 265 SHDNIICGITSVSFSKSGRLLLAGYDD-F------------NCNVWDALKAD--RAGVLAGHD-NRV--SCLGVTDDGMA 326 (340)
T ss_dssp CCTTCCSCEEEEEECTTSSEEEEEETT-S------------EEEEEETTTCC--EEEEEECCS-SCE--EEEEECTTSSC
T ss_pred ccCCcccceEEEEECCCCCEEEEECCC-C------------eEEEEEcccCc--EeeEeecCC-CcE--EEEEEcCCCCE
Confidence 111100 11113455899999998764 1 68899987651 222222211 111 23456799999
Q ss_pred EEeCCCC
Q 048136 414 FVGGSND 420 (559)
Q Consensus 414 lv~GG~~ 420 (559)
+++||.+
T Consensus 327 l~s~s~D 333 (340)
T 1got_B 327 VATGSWD 333 (340)
T ss_dssp EEEEETT
T ss_pred EEEEcCC
Confidence 9999864
No 25
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.83 E-value=0.022 Score=56.48 Aligned_cols=249 Identities=12% Similarity=0.056 Sum_probs=121.3
Q ss_pred eeEEEeCCCCCEEeCccCCCcccccCeecCCCc-EEEEcCCCCCCCeEEEEeCCCCCCeecCCCcccccc--------cc
Q 048136 101 HSVFYNVNTLQVTPLKVITDTWCSSGGLDVNGN-LISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGR--------WY 171 (559)
Q Consensus 101 ~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~-i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R--------~y 171 (559)
...+||+.+.+....-... ....+.++.+||+ +|+.+.. ...+.+||+. +.+-...-. +.... .-
T Consensus 70 ~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~---~~~v~~~d~~-~~~~~~~~~-~~~~~~~~~~~~~~~ 143 (353)
T 3vgz_A 70 VVYRLDPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTV---NSAVTAIDAK-TGEVKGRLV-LDDRKRTEEVRPLQP 143 (353)
T ss_dssp EEEEECTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETT---TTEEEEEETT-TCCEEEEEE-SCCCCCCSSCCCCEE
T ss_pred cEEEEcCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecC---CCEEEEEeCC-CCeeEEEEe-cCCCccccccCCCCC
Confidence 3788999888754332211 1122345667887 6666543 2589999998 655322111 11110 11
Q ss_pred ceEEEccCCc-EEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEec--CcEEEee
Q 048136 172 ATQALLADGS-FLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN--NRSILLD 247 (559)
Q Consensus 172 ~s~~~L~dG~-VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg--~~~e~yD 247 (559)
.+.+.-+||+ +|+.+......+.+| +.+.+ -....+.. . ..-......++|+.++++. ..+.+||
T Consensus 144 ~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~---~~~~~~~~-~-------~~~~~~~~s~dg~~l~~~~~~~~i~~~d 212 (353)
T 3vgz_A 144 RELVADDATNTVYISGIGKESVIWVVDGGNIK---LKTAIQNT-G-------KMSTGLALDSEGKRLYTTNADGELITID 212 (353)
T ss_dssp EEEEEETTTTEEEEEEESSSCEEEEEETTTTE---EEEEECCC-C-------TTCCCCEEETTTTEEEEECTTSEEEEEE
T ss_pred ceEEECCCCCEEEEEecCCCceEEEEcCCCCc---eEEEecCC-C-------CccceEEECCCCCEEEEEcCCCeEEEEE
Confidence 2345556776 565552333445666 54331 11111100 0 0011234456887555543 4577899
Q ss_pred CCCCeEEEECCCCCCCCCcccCCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCC
Q 048136 248 PRANYVLREYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSP 327 (559)
Q Consensus 248 p~t~~W~~~~p~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~ 327 (559)
..+++-...++.-..+...++ .++.+ .+ .+..+|+..... ..+.+||+..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~---~~~~~--s~-------dg~~l~~~~~~~-----------------~~v~~~d~~~- 262 (353)
T 3vgz_A 213 TADNKILSRKKLLDDGKEHFF---INISL--DT-------ARQRAFITDSKA-----------------AEVLVVDTRN- 262 (353)
T ss_dssp TTTTEEEEEEECCCSSSCCCE---EEEEE--ET-------TTTEEEEEESSS-----------------SEEEEEETTT-
T ss_pred CCCCeEEEEEEcCCCCCCccc---ceEEE--CC-------CCCEEEEEeCCC-----------------CEEEEEECCC-
Confidence 998875533321010011111 11211 11 134566654321 3455677653
Q ss_pred CCceeee-cCCCCcccccEEEeeCCe-EEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCccceeee
Q 048136 328 DPVWTTE-KMPTPRVMSDGVLLPTGD-VLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVA 405 (559)
Q Consensus 328 ~~~W~~~-~M~~~R~~~~av~LpdG~-V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a 405 (559)
.+.... +.+.+ . ....-+||+ +|+.+... ..+.+||.++. +....-+. +..-+ ..
T Consensus 263 -~~~~~~~~~~~~--~-~~~~s~dg~~l~v~~~~~-------------~~v~~~d~~~~---~~~~~~~~--~~~~~-~~ 319 (353)
T 3vgz_A 263 -GNILAKVAAPES--L-AVLFNPARNEAYVTHRQA-------------GKVSVIDAKSY---KVVKTFDT--PTHPN-SL 319 (353)
T ss_dssp -CCEEEEEECSSC--C-CEEEETTTTEEEEEETTT-------------TEEEEEETTTT---EEEEEEEC--CSEEE-EE
T ss_pred -CcEEEEEEcCCC--c-eEEECCCCCEEEEEECCC-------------CeEEEEECCCC---eEEEEEec--CCCCC-eE
Confidence 222222 33333 2 245668987 77765432 16789999877 54432111 22222 34
Q ss_pred EECCCCc-eEEeCCC
Q 048136 406 NLLPDGR-VFVGGSN 419 (559)
Q Consensus 406 ~llpdG~-Vlv~GG~ 419 (559)
.+.|||+ +|++...
T Consensus 320 ~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 320 ALSADGKTLYVSVKQ 334 (353)
T ss_dssp EECTTSCEEEEEEEC
T ss_pred EEcCCCCEEEEEEcc
Confidence 5779998 7776654
No 26
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.81 E-value=0.0021 Score=63.59 Aligned_cols=217 Identities=11% Similarity=0.058 Sum_probs=120.2
Q ss_pred CCcEEEEcCCCCCCCeEEEEeCCCCCC--eecCCCccccccccceEEEccCCcEEEEcCCCCCceeEE-cCCCCCCCcce
Q 048136 131 NGNLISTGGFLGGSRTTRYLWGCPTCD--WTEYPTALKDGRWYATQALLADGSFLIFGGRDSFSYEYI-PAERTENAYSI 207 (559)
Q Consensus 131 dG~i~v~GG~~~g~~~v~~ydp~~t~~--W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~ 207 (559)
.|+++++|.. ...+.++|+. +.+ |+.-.. .....+.+..++||++|+.+. ..+..| | +++ .-|..
T Consensus 4 ~~~~lv~~~~---~~~v~~~d~~-tG~~~w~~~~~---~~~~~~~~~~~pdG~ilvs~~---~~V~~~d~-~G~-~~W~~ 71 (276)
T 3no2_A 4 PQHLLVGGSG---WNKIAIINKD-TKEIVWEYPLE---KGWECNSVAATKAGEILFSYS---KGAKMITR-DGR-ELWNI 71 (276)
T ss_dssp CCEEEEECTT---CSEEEEEETT-TTEEEEEEECC---TTCCCCEEEECTTSCEEEECB---SEEEEECT-TSC-EEEEE
T ss_pred CCcEEEeeCC---CCEEEEEECC-CCeEEEEeCCC---ccCCCcCeEECCCCCEEEeCC---CCEEEECC-CCC-EEEEE
Confidence 4678888764 3688999996 443 754321 112356778889999999432 345566 6 442 23433
Q ss_pred eccccccccccccCCccceEEEeeCCcEEEEec---CcEEEeeCCCCe-EEEECCC-CCCCCCcccCCCceeeccccccc
Q 048136 208 PFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN---NRSILLDPRANY-VLREYPP-LPGGARNYPSTSTSVLLPLKLYR 282 (559)
Q Consensus 208 ~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg---~~~e~yDp~t~~-W~~~~p~-mp~~~~~~p~~g~~v~lpl~~~~ 282 (559)
..+. .. ....+..++||++++... ..+..+|+.... |...+.. ++. ....++ +.. .+
T Consensus 72 ~~~~--~~-------~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~-~~~~~~-~v~-~~------ 133 (276)
T 3no2_A 72 AAPA--GC-------EMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIER-PHAQFR-QIN-KN------ 133 (276)
T ss_dssp ECCT--TC-------EEEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSS-GGGSCS-CCE-EC------
T ss_pred cCCC--Cc-------cccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCc-cccccc-Cce-EC------
Confidence 2210 00 011244678999998753 356778885442 3322211 110 011111 222 22
Q ss_pred ccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeeecCCCCcccccEEEeeCCeEEEEcCcCCC
Q 048136 283 DYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTEKMPTPRVMSDGVLLPTGDVLLINGAELG 362 (559)
Q Consensus 283 ~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~R~~~~av~LpdG~V~vvGG~~~g 362 (559)
.+|.++++...+ ..+.+||+. ..-.|+...-. +. .++..+++|+++|++...
T Consensus 134 -----~~G~~lv~~~~~-----------------~~v~~~d~~-G~~~w~~~~~~--~~-~~~~~~~~g~~~v~~~~~-- 185 (276)
T 3no2_A 134 -----KKGNYLVPLFAT-----------------SEVREIAPN-GQLLNSVKLSG--TP-FSSAFLDNGDCLVACGDA-- 185 (276)
T ss_dssp -----TTSCEEEEETTT-----------------TEEEEECTT-SCEEEEEECSS--CC-CEEEECTTSCEEEECBTT--
T ss_pred -----CCCCEEEEecCC-----------------CEEEEECCC-CCEEEEEECCC--Cc-cceeEcCCCCEEEEeCCC--
Confidence 267777775432 245667765 34567765211 12 235678899999986542
Q ss_pred CCCccCCCCCCcccEEEeCCCCCCCeEEecC-CCCCCcc-ceeeeEECCCCceEEeC
Q 048136 363 SAGWKDADKPCFKPLLYKPSKPPGSRFTELA-PSDIPRM-YHSVANLLPDGRVFVGG 417 (559)
Q Consensus 363 ~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~-~~~~~R~-yhs~a~llpdG~Vlv~G 417 (559)
..+..+||++.+- .|+.-. ...-.|+ +.+.+.+++||.|||+.
T Consensus 186 -----------~~v~~~d~~tG~~-~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 186 -----------HCFVQLNLESNRI-VRRVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp -----------SEEEEECTTTCCE-EEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred -----------CeEEEEeCcCCcE-EEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence 1578999986521 466432 1111132 34556788999999997
No 27
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.81 E-value=0.0015 Score=65.68 Aligned_cols=149 Identities=11% Similarity=-0.037 Sum_probs=76.2
Q ss_pred eeEEEeCCCCCEEeCccCCCccc-ccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccc-cccccceEEEcc
Q 048136 101 HSVFYNVNTLQVTPLKVITDTWC-SSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALK-DGRWYATQALLA 178 (559)
Q Consensus 101 ~~~~yDp~t~~w~~~~~~~~~~c-~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~-~~R~y~s~~~L~ 178 (559)
....+|+.+++++.+........ ..-++-+||+||+++.. .+...+.+||.. +.++..+.. +. ....-...+.-+
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~-~~~~~v~~~~~~-~g~~~~~~~-~~~~~~~p~~~a~sp 95 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKE-DDEGGIAAWQID-GQTAHKLNT-VVAPGTPPAYVAVDE 95 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEE-TTEEEEEEEEEE-TTEEEEEEE-EEEESCCCSEEEEET
T ss_pred EEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEec-CCCceEEEEEec-CCcEEEeee-eecCCCCCEEEEECC
Confidence 36677888888876543211111 22345679997777532 123578899987 677655432 22 122223456667
Q ss_pred CCcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccc--cCCccce-EEEeeCCcEEEEec--CcEEEeeCC-CC
Q 048136 179 DGSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVL--ENNLYPF-VYLVPDGNLYIFAN--NRSILLDPR-AN 251 (559)
Q Consensus 179 dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~--~~~~yp~-~~~l~~G~iyv~Gg--~~~e~yDp~-t~ 251 (559)
||+.+++.+.....+.+| ...+. .......+........ .....++ +...+||++|+.+. ..+.+||.. ++
T Consensus 96 dg~~l~~~~~~~~~v~v~~~~~~g--~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g 173 (347)
T 3hfq_A 96 ARQLVYSANYHKGTAEVMKIAADG--ALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAG 173 (347)
T ss_dssp TTTEEEEEETTTTEEEEEEECTTS--CEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTS
T ss_pred CCCEEEEEeCCCCEEEEEEeCCCC--CeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCC
Confidence 898555555444456677 32210 1111111100000000 0001122 45567999887753 468889987 45
Q ss_pred eEE
Q 048136 252 YVL 254 (559)
Q Consensus 252 ~W~ 254 (559)
+..
T Consensus 174 ~~~ 176 (347)
T 3hfq_A 174 QLS 176 (347)
T ss_dssp CEE
T ss_pred cEE
Confidence 443
No 28
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.80 E-value=0.0041 Score=61.58 Aligned_cols=246 Identities=14% Similarity=0.117 Sum_probs=124.2
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccc-cccccceEEEccCC
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALK-DGRWYATQALLADG 180 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~-~~R~y~s~~~L~dG 180 (559)
+.+||..+++....-..+........+.++++++++|+.. ..+++||.. +.+-.. . +. +...-.+++.-+++
T Consensus 37 v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d---~~i~vwd~~-~~~~~~--~-~~~h~~~v~~~~~~~~~ 109 (304)
T 2ynn_A 37 VELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD---FRIRVFNYN-TGEKVV--D-FEAHPDYIRSIAVHPTK 109 (304)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT---SEEEEEETT-TCCEEE--E-EECCSSCEEEEEECSSS
T ss_pred EEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCC---CEEEEEECC-CCcEEE--E-EeCCCCcEEEEEEcCCC
Confidence 6788887765432212222223334567899999999863 589999987 554221 1 22 22333456667789
Q ss_pred cEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEee-CCcEEEEec--CcEEEeeCCCCeEEEE
Q 048136 181 SFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVP-DGNLYIFAN--NRSILLDPRANYVLRE 256 (559)
Q Consensus 181 ~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~-~G~iyv~Gg--~~~e~yDp~t~~W~~~ 256 (559)
+.++.|+.++ ++.+| ..++ +... ..+.... ..-..+...+ ++++++.|+ ..+.+||..+..-...
T Consensus 110 ~~l~sgs~D~-~v~lWd~~~~----~~~~-~~~~~h~-----~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~ 178 (304)
T 2ynn_A 110 PYVLSGSDDL-TVKLWNWENN----WALE-QTFEGHE-----HFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFT 178 (304)
T ss_dssp SEEEEEETTS-CEEEEEGGGT----TEEE-EEECCCC-----SCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEE
T ss_pred CEEEEECCCC-eEEEEECCCC----cchh-hhhcccC-----CcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccce
Confidence 9998888764 56777 3332 2111 1111110 0011122234 678888886 4578899865431111
Q ss_pred CCCCCCCCCcccCCCcee-ecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeee-
Q 048136 257 YPPLPGGARNYPSTSTSV-LLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTE- 334 (559)
Q Consensus 257 ~p~mp~~~~~~p~~g~~v-~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~- 334 (559)
+.. . ....-..+ ..|. .++++++.|+.+. ++..+|+.. .+-...
T Consensus 179 ~~~---~---~~~~v~~~~~~~~---------~~~~~l~s~s~D~-----------------~i~iWd~~~--~~~~~~~ 224 (304)
T 2ynn_A 179 LTT---G---QERGVNYVDYYPL---------PDKPYMITASDDL-----------------TIKIWDYQT--KSCVATL 224 (304)
T ss_dssp EEC---C---CTTCEEEEEECCS---------TTCCEEEEEETTS-----------------EEEEEETTT--TEEEEEE
T ss_pred ecc---C---CcCcEEEEEEEEc---------CCCCEEEEEcCCC-----------------eEEEEeCCC--Cccceee
Confidence 100 0 00000111 1111 1567788887652 334555442 111111
Q ss_pred cCCCCcccccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCccceeeeEECCCCc-e
Q 048136 335 KMPTPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANLLPDGR-V 413 (559)
Q Consensus 335 ~M~~~R~~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~llpdG~-V 413 (559)
.-....... ...-|++++++.|+.+ | ++.+||..+. +-...-.....+.+ +....|+|+ .
T Consensus 225 ~~h~~~v~~-~~~~p~~~~l~s~s~D-g------------~i~iWd~~~~---~~~~~~~~~~~~~~--~~~~~~~~~~~ 285 (304)
T 2ynn_A 225 EGHMSNVSF-AVFHPTLPIIISGSED-G------------TLKIWNSSTY---KVEKTLNVGLERSW--CIATHPTGRKN 285 (304)
T ss_dssp ECCSSCEEE-EEECSSSSEEEEEETT-S------------CEEEEETTTC---CEEEEECCSSSSEE--EEEECTTCGGG
T ss_pred CCCCCCEEE-EEECCCCCEEEEEcCC-C------------eEEEEECCCC---ceeeeccCCCccEE--EEEECCCCCce
Confidence 112222222 3456899999998865 2 6899999876 43322122222322 233467764 4
Q ss_pred -EEeCC
Q 048136 414 -FVGGS 418 (559)
Q Consensus 414 -lv~GG 418 (559)
++.|+
T Consensus 286 ~~asg~ 291 (304)
T 2ynn_A 286 YIASGF 291 (304)
T ss_dssp CEEEEE
T ss_pred EEEEec
Confidence 55554
No 29
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.80 E-value=0.0045 Score=64.29 Aligned_cols=254 Identities=11% Similarity=0.059 Sum_probs=128.7
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccc-cccccceEEEccCC
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALK-DGRWYATQALLADG 180 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~-~~R~y~s~~~L~dG 180 (559)
..+||..+++....-..+........+.++|+++++|+. + ..+++||.. +.+-.. . +. +...-.+++..++|
T Consensus 132 i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~-D--~~i~iwd~~-~~~~~~--~-~~~h~~~V~~v~~~p~~ 204 (410)
T 1vyh_C 132 IKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA-D--MTIKLWDFQ-GFECIR--T-MHGHDHNVSSVSIMPNG 204 (410)
T ss_dssp EEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEET-T--SCCCEEETT-SSCEEE--C-CCCCSSCEEEEEECSSS
T ss_pred EEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeC-C--CeEEEEeCC-CCceeE--E-EcCCCCCEEEEEEeCCC
Confidence 678998877654322223222223345678999999987 3 478889987 543322 1 22 12223345566789
Q ss_pred cEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEec--CcEEEeeCCCCeEEEEC
Q 048136 181 SFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN--NRSILLDPRANYVLREY 257 (559)
Q Consensus 181 ~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg--~~~e~yDp~t~~W~~~~ 257 (559)
+.++.|+.+. ++.+| ..++. . ...+ .... ..-..+...++|++++.|+ ..+.+||..+......+
T Consensus 205 ~~l~s~s~D~-~i~~wd~~~~~---~--~~~~-~~h~-----~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~ 272 (410)
T 1vyh_C 205 DHIVSASRDK-TIKMWEVQTGY---C--VKTF-TGHR-----EWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272 (410)
T ss_dssp SEEEEEETTS-EEEEEETTTCC---E--EEEE-ECCS-----SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred CEEEEEeCCC-eEEEEECCCCc---E--EEEE-eCCC-----ccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEe
Confidence 9998888764 56667 44331 1 1111 1110 0111223346899998886 46889999887655333
Q ss_pred CCCCCCCCcccCCCcee-ecccccc----cccc-----cccCcEEEEEcCCCCccccccccccccccccCceEEEEecCC
Q 048136 258 PPLPGGARNYPSTSTSV-LLPLKLY----RDYY-----ARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSP 327 (559)
Q Consensus 258 p~mp~~~~~~p~~g~~v-~lpl~~~----~~~~-----~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~ 327 (559)
..-. .. -.++ ..|.... ...+ ....++++++|+.+. ++..+|+..
T Consensus 273 ~~h~----~~---v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~-----------------~i~iwd~~~- 327 (410)
T 1vyh_C 273 REHR----HV---VECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK-----------------TIKMWDVST- 327 (410)
T ss_dssp CCCS----SC---EEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTS-----------------EEEEEETTT-
T ss_pred cCCC----ce---EEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCC-----------------eEEEEECCC-
Confidence 2100 00 0011 0010000 0000 001366788877652 344555442
Q ss_pred CCceeeecC--CCCcccccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCccceeee
Q 048136 328 DPVWTTEKM--PTPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVA 405 (559)
Q Consensus 328 ~~~W~~~~M--~~~R~~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a 405 (559)
.. ....+ ....... ...-++|+.++.||.+ + .+.+||..+. +....+... ... -...
T Consensus 328 -~~-~~~~~~~h~~~v~~-v~~~~~g~~l~s~s~D-~------------~i~vwd~~~~--~~~~~~~~h-~~~--v~~l 386 (410)
T 1vyh_C 328 -GM-CLMTLVGHDNWVRG-VLFHSGGKFILSCADD-K------------TLRVWDYKNK--RCMKTLNAH-EHF--VTSL 386 (410)
T ss_dssp -TE-EEEEEECCSSCEEE-EEECSSSSCEEEEETT-T------------EEEEECCTTS--CCCEEEECC-SSC--EEEE
T ss_pred -Cc-eEEEEECCCCcEEE-EEEcCCCCEEEEEeCC-C------------eEEEEECCCC--ceEEEEcCC-CCc--EEEE
Confidence 11 11111 1122222 3445789988888764 1 6789998665 122222111 111 1234
Q ss_pred EECCCCceEEeCCCC
Q 048136 406 NLLPDGRVFVGGSND 420 (559)
Q Consensus 406 ~llpdG~Vlv~GG~~ 420 (559)
.+.||+..+++|+.+
T Consensus 387 ~~~~~~~~l~sgs~D 401 (410)
T 1vyh_C 387 DFHKTAPYVVTGSVD 401 (410)
T ss_dssp EECSSSSCEEEEETT
T ss_pred EEcCCCCEEEEEeCC
Confidence 567999999999864
No 30
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.75 E-value=0.012 Score=58.47 Aligned_cols=270 Identities=9% Similarity=0.010 Sum_probs=130.8
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCc
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGS 181 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~ 181 (559)
..+||..+++....-..+..........++|+.+++|+. + ..+.+||.. +.+.... +.....-.+.+..++|+
T Consensus 56 i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-d--g~i~iwd~~-~~~~~~~---~~~~~~v~~~~~~~~~~ 128 (369)
T 3zwl_B 56 ASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSA-D--YSIKLWDVS-NGQCVAT---WKSPVPVKRVEFSPCGN 128 (369)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET-T--TEEEEEETT-TCCEEEE---EECSSCEEEEEECTTSS
T ss_pred EEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeC-C--CeEEEEECC-CCcEEEE---eecCCCeEEEEEccCCC
Confidence 578888776654322222222223445678999999886 3 579999987 5543322 22333334566677899
Q ss_pred EEEEcCCC----CCceeEE-cCCCCC-CCcceecc-ccccccccccCCccceEEEeeCCcEEEEecC--cEEEeeCCC-C
Q 048136 182 FLIFGGRD----SFSYEYI-PAERTE-NAYSIPFQ-FLRDTYDVLENNLYPFVYLVPDGNLYIFANN--RSILLDPRA-N 251 (559)
Q Consensus 182 VyvvGG~~----~~s~E~y-P~~~~~-~~w~~~~p-~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg~--~~e~yDp~t-~ 251 (559)
.+++++.+ ...+.+| ...... ........ .......+........+...++|+.+++|+. .+.+||..+ .
T Consensus 129 ~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 208 (369)
T 3zwl_B 129 YFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNY 208 (369)
T ss_dssp EEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTT
T ss_pred EEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCc
Confidence 98888765 1345555 222110 00000000 0000000000001122334568888888764 578999988 4
Q ss_pred eEEEECCCCCCCCCcccCCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCce
Q 048136 252 YVLREYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVW 331 (559)
Q Consensus 252 ~W~~~~p~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W 331 (559)
.....+.. . .+....+... .+++.+++|+.+ ..+..+|+.. .+.
T Consensus 209 ~~~~~~~~-------~--~~~v~~~~~~--------~~~~~l~~~~~d-----------------~~i~v~d~~~--~~~ 252 (369)
T 3zwl_B 209 EYVDSIDL-------H--EKSISDMQFS--------PDLTYFITSSRD-----------------TNSFLVDVST--LQV 252 (369)
T ss_dssp EEEEEEEC-------C--SSCEEEEEEC--------TTSSEEEEEETT-----------------SEEEEEETTT--CCE
T ss_pred EeEEEEec-------C--CCceeEEEEC--------CCCCEEEEecCC-----------------ceEEEEECCC--Cce
Confidence 43322211 0 0111111111 267777777654 1344555543 111
Q ss_pred eeecCCCCcccccEEEeeCCeEEEEcCcCCCCCCcc-CCCCCCcccEEEeCCCCCCCeEEecCCCCCCccceeeeEECCC
Q 048136 332 TTEKMPTPRVMSDGVLLPTGDVLLINGAELGSAGWK-DADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANLLPD 410 (559)
Q Consensus 332 ~~~~M~~~R~~~~av~LpdG~V~vvGG~~~g~~g~~-~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~llpd 410 (559)
... +............|+|+.+++|+...+..-+. ........+.+||..+.. .-..+... ... -....+.||
T Consensus 253 ~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~--~~~~~~~~-~~~--v~~~~~s~~ 326 (369)
T 3zwl_B 253 LKK-YETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEE--EIGRVQGH-FGP--LNTVAISPQ 326 (369)
T ss_dssp EEE-EECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCC--EEEEEECC-SSC--EEEEEECTT
T ss_pred eee-ecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCc--chhheecc-cCc--EEEEEECCC
Confidence 111 11111222246678999999887652211110 011112367889987661 22222111 111 123557899
Q ss_pred CceEEeCCCC
Q 048136 411 GRVFVGGSND 420 (559)
Q Consensus 411 G~Vlv~GG~~ 420 (559)
|+.+++|+.+
T Consensus 327 ~~~l~s~~~d 336 (369)
T 3zwl_B 327 GTSYASGGED 336 (369)
T ss_dssp SSEEEEEETT
T ss_pred CCEEEEEcCC
Confidence 9999999864
No 31
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.73 E-value=0.0084 Score=62.56 Aligned_cols=135 Identities=12% Similarity=0.064 Sum_probs=71.2
Q ss_pred eEEEeCCCCCEEeCccC--CCcccccCeecC-CCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEcc
Q 048136 102 SVFYNVNTLQVTPLKVI--TDTWCSSGGLDV-NGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLA 178 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~--~~~~c~~~~~l~-dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~ 178 (559)
+.+||..+++...+... |.....+-.+.+ |+.+++.|+. | .++++||.. +.........-....+..+.+.-+
T Consensus 144 i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~-D--~~v~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~ 219 (435)
T 4e54_B 144 IMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSM-E--GTTRLQDFK-GNILRVFASSDTINIWFCSLDVSA 219 (435)
T ss_dssp EEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECS-S--SCEEEEETT-SCEEEEEECCSSCSCCCCCEEEET
T ss_pred EEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeC-C--CEEEEeecc-CCceeEEeccCCCCccEEEEEECC
Confidence 67888877664433222 222112223333 7889999887 3 478999987 554433221112233444566667
Q ss_pred CCcEEEEcCCCCCceeEEcCCCCCCCcceeccccccccccccCCccceEEEeeCCc-EEEEec--CcEEEeeCCCCe
Q 048136 179 DGSFLIFGGRDSFSYEYIPAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGN-LYIFAN--NRSILLDPRANY 252 (559)
Q Consensus 179 dG~VyvvGG~~~~s~E~yP~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~-iyv~Gg--~~~e~yDp~t~~ 252 (559)
+|+++++|+.++ .+.+|....+ ....+ ....+ .--.+...++++ +++.|+ ..+.+||..+.+
T Consensus 220 ~~~~l~~g~~dg-~i~~wd~~~~-----~~~~~-~~h~~-----~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~ 284 (435)
T 4e54_B 220 SSRMVVTGDNVG-NVILLNMDGK-----ELWNL-RMHKK-----KVTHVALNPCCDWFLATASVDQTVKIWDLRQVR 284 (435)
T ss_dssp TTTEEEEECSSS-BEEEEESSSC-----BCCCS-BCCSS-----CEEEEEECTTCSSEEEEEETTSBCCEEETTTCC
T ss_pred CCCEEEEEeCCC-cEeeeccCcc-----eeEEE-ecccc-----eEEeeeecCCCceEEEEecCcceeeEEeccccc
Confidence 999999998764 4566622211 01111 11000 001122234554 676765 457789987654
No 32
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.72 E-value=0.011 Score=59.90 Aligned_cols=229 Identities=15% Similarity=0.142 Sum_probs=121.0
Q ss_pred ecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCcEEEEcCCCCCceeEEcC-CCCCCCcc
Q 048136 128 LDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGSFLIFGGRDSFSYEYIPA-ERTENAYS 206 (559)
Q Consensus 128 ~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~yP~-~~~~~~w~ 206 (559)
.-+||+.+++||. | ..+++||.. +.+....-. + ...+-.+++.-++|+.++.||.++ .+.+|+. .+......
T Consensus 72 ~s~d~~~l~s~s~-D--g~v~vWd~~-~~~~~~~~~-~-~~~~v~~~~~sp~g~~lasg~~d~-~i~v~~~~~~~~~~~~ 144 (354)
T 2pbi_B 72 WCKDKRRIVSSSQ-D--GKVIVWDSF-TTNKEHAVT-M-PCTWVMACAYAPSGCAIACGGLDN-KCSVYPLTFDKNENMA 144 (354)
T ss_dssp ECTTSSEEEEEET-T--SEEEEEETT-TCCEEEEEE-C-SSSCCCEEEECTTSSEEEEESTTS-EEEEEECCCCTTCCSG
T ss_pred ECCCCCEEEEEeC-C--CeEEEEECC-CCCcceEEe-c-CCCCEEEEEECCCCCEEEEeeCCC-CEEEEEEecccccccc
Confidence 4468999999987 3 589999987 554332111 1 233455677778999999999875 4556622 11000000
Q ss_pred eeccccccccccccCCccceEEEeeCCcEEEEec--CcEEEeeCCCCeEEEECCCCCCCCCcccCCCceeeccccccccc
Q 048136 207 IPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN--NRSILLDPRANYVLREYPPLPGGARNYPSTSTSVLLPLKLYRDY 284 (559)
Q Consensus 207 ~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg--~~~e~yDp~t~~W~~~~p~mp~~~~~~p~~g~~v~lpl~~~~~~ 284 (559)
.....+... ...-..+...++++.++.|+ ..+.+||..+++....+. + + ......+.+.+
T Consensus 145 ~~~~~~~~h-----~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~---~----h--~~~v~~~~~~~---- 206 (354)
T 2pbi_B 145 AKKKSVAMH-----TNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFH---G----H--GADVLCLDLAP---- 206 (354)
T ss_dssp GGCEEEEEC-----SSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE---C----C--SSCEEEEEECC----
T ss_pred ccceeeecc-----CCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEc---C----C--CCCeEEEEEEe----
Confidence 000000000 00111122345777666664 468899999887553331 1 0 11111111111
Q ss_pred ccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeee-cCCCCcccccEEEeeCCeEEEEcCcCCCC
Q 048136 285 YARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTE-KMPTPRVMSDGVLLPTGDVLLINGAELGS 363 (559)
Q Consensus 285 ~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~av~LpdG~V~vvGG~~~g~ 363 (559)
..+++.+++|+.+. ++..+|+.. .+.... ......... ....|+|+.++.|+.+ +
T Consensus 207 --~~~g~~l~sgs~Dg-----------------~v~~wd~~~--~~~~~~~~~h~~~v~~-v~~~p~~~~l~s~s~D-~- 262 (354)
T 2pbi_B 207 --SETGNTFVSGGCDK-----------------KAMVWDMRS--GQCVQAFETHESDVNS-VRYYPSGDAFASGSDD-A- 262 (354)
T ss_dssp --CSSCCEEEEEETTS-----------------CEEEEETTT--CCEEEEECCCSSCEEE-EEECTTSSEEEEEETT-S-
T ss_pred --CCCCCEEEEEeCCC-----------------eEEEEECCC--CcEEEEecCCCCCeEE-EEEeCCCCEEEEEeCC-C-
Confidence 02467888887652 344555543 222211 222222322 3455899999998865 1
Q ss_pred CCccCCCCCCcccEEEeCCCCCCCeEE-ecCCCCCCccceeeeEECCCCceEEeCCCC
Q 048136 364 AGWKDADKPCFKPLLYKPSKPPGSRFT-ELAPSDIPRMYHSVANLLPDGRVFVGGSND 420 (559)
Q Consensus 364 ~g~~~~~~~~~~~e~YDP~t~~g~~Wt-~~~~~~~~R~yhs~a~llpdG~Vlv~GG~~ 420 (559)
++.+||..++ +-. ...... .........+.|||+.+++|+..
T Consensus 263 -----------~v~lwd~~~~---~~~~~~~~~~-~~~~~~~~~~s~~g~~l~~g~~d 305 (354)
T 2pbi_B 263 -----------TCRLYDLRAD---REVAIYSKES-IIFGASSVDFSLSGRLLFAGYND 305 (354)
T ss_dssp -----------CEEEEETTTT---EEEEEECCTT-CCSCEEEEEECTTSSEEEEEETT
T ss_pred -----------eEEEEECCCC---cEEEEEcCCC-cccceeEEEEeCCCCEEEEEECC
Confidence 6789998876 422 221111 11122345678999999999864
No 33
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.70 E-value=0.0091 Score=60.07 Aligned_cols=224 Identities=13% Similarity=0.167 Sum_probs=117.8
Q ss_pred ecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccc-cccccceEEEccCCcEEEEcCCCCCceeEE-cCCCCCCCc
Q 048136 128 LDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALK-DGRWYATQALLADGSFLIFGGRDSFSYEYI-PAERTENAY 205 (559)
Q Consensus 128 ~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~-~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w 205 (559)
.-+||+++++|+. + ..+++||.. +.+-... +. ...+-.+++.-++|+.++.||.++ .+.+| ..+.. .-
T Consensus 63 ~s~d~~~l~s~s~-D--g~v~iWd~~-~~~~~~~---~~~~~~~v~~~~~s~~~~~l~s~~~d~-~v~iw~~~~~~--~~ 132 (340)
T 1got_B 63 WGTDSRLLLSASQ-D--GKLIIWDSY-TTNKVHA---IPLRSSWVMTCAYAPSGNYVACGGLDN-ICSIYNLKTRE--GN 132 (340)
T ss_dssp ECTTSSEEEEEET-T--TEEEEEETT-TCCEEEE---EECSSSCEEEEEECTTSSEEEEEETTC-EEEEEETTTCS--BS
T ss_pred ECCCCCEEEEEeC-C--CcEEEEECC-CCCcceE---eecCCccEEEEEECCCCCEEEEEeCCC-eEEEEECccCC--Cc
Confidence 3468999999987 3 589999987 5442221 11 223334556677999999998764 56677 33321 00
Q ss_pred ceeccccccccccccCCccceEEEeeCCcEEEEec-CcEEEeeCCCCeEEEECCCCCCCCCcccCCCceeeccccccccc
Q 048136 206 SIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN-NRSILLDPRANYVLREYPPLPGGARNYPSTSTSVLLPLKLYRDY 284 (559)
Q Consensus 206 ~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg-~~~e~yDp~t~~W~~~~p~mp~~~~~~p~~g~~v~lpl~~~~~~ 284 (559)
......+.... ..-..+...++++++..+. ..+.+||..+++....+. + + .+....+...
T Consensus 133 ~~~~~~~~~h~-----~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~---~----h--~~~v~~~~~~----- 193 (340)
T 1got_B 133 VRVSRELAGHT-----GYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFT---G----H--TGDVMSLSLA----- 193 (340)
T ss_dssp CEEEEEEECCS-----SCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEEC---C----C--SSCEEEEEEC-----
T ss_pred ceeEEEecCCC-----ccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEc---C----C--CCceEEEEEC-----
Confidence 01111111110 0111122245777554443 468899999887654332 1 0 1111111111
Q ss_pred ccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeee-cCCCCcccccEEEeeCCeEEEEcCcCCCC
Q 048136 285 YARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTE-KMPTPRVMSDGVLLPTGDVLLINGAELGS 363 (559)
Q Consensus 285 ~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~av~LpdG~V~vvGG~~~g~ 363 (559)
.++++++.|+.+. ++..+|+.. ..-... .-....... ...-|+|+.+++|+.+ +
T Consensus 194 ---~~~~~l~sg~~d~-----------------~v~~wd~~~--~~~~~~~~~h~~~v~~-v~~~p~~~~l~s~s~d-~- 248 (340)
T 1got_B 194 ---PDTRLFVSGACDA-----------------SAKLWDVRE--GMCRQTFTGHESDINA-ICFFPNGNAFATGSDD-A- 248 (340)
T ss_dssp ---TTSSEEEEEETTS-----------------CEEEEETTT--CSEEEEECCCSSCEEE-EEECTTSSEEEEEETT-S-
T ss_pred ---CCCCEEEEEeCCC-----------------cEEEEECCC--CeeEEEEcCCcCCEEE-EEEcCCCCEEEEEcCC-C-
Confidence 2678888887652 344555542 111111 112222222 3456899999998865 1
Q ss_pred CCccCCCCCCcccEEEeCCCCCCCeEE-ecCCCCCCccceeeeEECCCCceEEeCCCC
Q 048136 364 AGWKDADKPCFKPLLYKPSKPPGSRFT-ELAPSDIPRMYHSVANLLPDGRVFVGGSND 420 (559)
Q Consensus 364 ~g~~~~~~~~~~~e~YDP~t~~g~~Wt-~~~~~~~~R~yhs~a~llpdG~Vlv~GG~~ 420 (559)
++.+||..+. +-. ....... ...-....+.|||+.+++|+..
T Consensus 249 -----------~v~iwd~~~~---~~~~~~~~~~~-~~~v~~~~~s~~g~~l~~g~~d 291 (340)
T 1got_B 249 -----------TCRLFDLRAD---QELMTYSHDNI-ICGITSVSFSKSGRLLLAGYDD 291 (340)
T ss_dssp -----------CEEEEETTTT---EEEEEECCTTC-CSCEEEEEECTTSSEEEEEETT
T ss_pred -----------cEEEEECCCC---cEEEEEccCCc-ccceEEEEECCCCCEEEEECCC
Confidence 6789998876 422 1111110 1111234578999999999864
No 34
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.68 E-value=0.019 Score=58.23 Aligned_cols=249 Identities=14% Similarity=0.133 Sum_probs=128.1
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCe---ecCCCccc-cccccceEEEc
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDW---TEYPTALK-DGRWYATQALL 177 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W---~~~~~~m~-~~R~y~s~~~L 177 (559)
+.+||..+.+....-..+..+-......++|+.+++||.. ..+.+|+.. ...- ......+. +...-.++...
T Consensus 88 v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d---~~i~v~~~~-~~~~~~~~~~~~~~~~h~~~v~~~~~~ 163 (354)
T 2pbi_B 88 VIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLD---NKCSVYPLT-FDKNENMAAKKKSVAMHTNYLSACSFT 163 (354)
T ss_dssp EEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTT---SEEEEEECC-CCTTCCSGGGCEEEEECSSCEEEEEEC
T ss_pred EEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCC---CCEEEEEEe-ccccccccccceeeeccCCcEEEEEEe
Confidence 6788887766544333333333334567899999999973 578888865 3211 01000111 11122234445
Q ss_pred cCCcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEee--CCcEEEEec--CcEEEeeCCCCe
Q 048136 178 ADGSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVP--DGNLYIFAN--NRSILLDPRANY 252 (559)
Q Consensus 178 ~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~--~G~iyv~Gg--~~~e~yDp~t~~ 252 (559)
++++.++.|+.+ .++.+| ..+++ ....+ .... ..-......+ +|++++.|+ ..+.+||.++++
T Consensus 164 ~~~~~l~t~s~D-~~v~lwd~~~~~-----~~~~~-~~h~-----~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~ 231 (354)
T 2pbi_B 164 NSDMQILTASGD-GTCALWDVESGQ-----LLQSF-HGHG-----ADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQ 231 (354)
T ss_dssp SSSSEEEEEETT-SEEEEEETTTCC-----EEEEE-ECCS-----SCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCC
T ss_pred CCCCEEEEEeCC-CcEEEEeCCCCe-----EEEEE-cCCC-----CCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCc
Confidence 678777777765 356777 44331 11111 1100 0000112233 578888886 468899999887
Q ss_pred EEEECCCCCCCCCcccCCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCcee
Q 048136 253 VLREYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWT 332 (559)
Q Consensus 253 W~~~~p~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~ 332 (559)
..+.+.. .... -.++.+ . .+++.++.|+.+. ++..+|+.. .+-.
T Consensus 232 ~~~~~~~----h~~~---v~~v~~--~--------p~~~~l~s~s~D~-----------------~v~lwd~~~--~~~~ 275 (354)
T 2pbi_B 232 CVQAFET----HESD---VNSVRY--Y--------PSGDAFASGSDDA-----------------TCRLYDLRA--DREV 275 (354)
T ss_dssp EEEEECC----CSSC---EEEEEE--C--------TTSSEEEEEETTS-----------------CEEEEETTT--TEEE
T ss_pred EEEEecC----CCCC---eEEEEE--e--------CCCCEEEEEeCCC-----------------eEEEEECCC--CcEE
Confidence 6543321 0000 112211 1 2577888887652 344555542 1111
Q ss_pred ee-cCCCCccc-ccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCccceeeeEECCC
Q 048136 333 TE-KMPTPRVM-SDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANLLPD 410 (559)
Q Consensus 333 ~~-~M~~~R~~-~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~llpd 410 (559)
.. .-...... .....-|+|+++++|+.+ + ++.+||..+. +.-..+... ..+ -....+.||
T Consensus 276 ~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d-~------------~i~vwd~~~~--~~~~~l~~h-~~~--v~~l~~spd 337 (354)
T 2pbi_B 276 AIYSKESIIFGASSVDFSLSGRLLFAGYND-Y------------TINVWDVLKG--SRVSILFGH-ENR--VSTLRVSPD 337 (354)
T ss_dssp EEECCTTCCSCEEEEEECTTSSEEEEEETT-S------------CEEEEETTTC--SEEEEECCC-SSC--EEEEEECTT
T ss_pred EEEcCCCcccceeEEEEeCCCCEEEEEECC-C------------cEEEEECCCC--ceEEEEECC-CCc--EEEEEECCC
Confidence 11 11111111 112345799999988754 1 6889998665 133333211 111 234567899
Q ss_pred CceEEeCCCC
Q 048136 411 GRVFVGGSND 420 (559)
Q Consensus 411 G~Vlv~GG~~ 420 (559)
|+.+++|+.+
T Consensus 338 g~~l~sgs~D 347 (354)
T 2pbi_B 338 GTAFCSGSWD 347 (354)
T ss_dssp SSCEEEEETT
T ss_pred CCEEEEEcCC
Confidence 9999999864
No 35
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.61 E-value=0.012 Score=60.71 Aligned_cols=253 Identities=11% Similarity=0.047 Sum_probs=121.7
Q ss_pred eEEEeCCCCCEEeCccC-----CCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccc-cccccceEE
Q 048136 102 SVFYNVNTLQVTPLKVI-----TDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALK-DGRWYATQA 175 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~-----~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~-~~R~y~s~~ 175 (559)
..+||+.+++....... +...........+|++++.++.. ..+++||.. +.+.... +. ....-.+.+
T Consensus 146 i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d---~~v~~~d~~-~~~~~~~---~~~~~~~~~~~~ 218 (433)
T 3bws_A 146 MDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQA---NAVHVFDLK-TLAYKAT---VDLTGKWSKILL 218 (433)
T ss_dssp EEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGG---TEEEEEETT-TCCEEEE---EECSSSSEEEEE
T ss_pred EEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCC---CEEEEEECC-CceEEEE---EcCCCCCeeEEE
Confidence 67899998877653221 11111223345689999998752 589999987 5543221 21 122223445
Q ss_pred EccCCcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccc-eEEEeeCCcEEEEec----------CcE
Q 048136 176 LLADGSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYP-FVYLVPDGNLYIFAN----------NRS 243 (559)
Q Consensus 176 ~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp-~~~~l~~G~iyv~Gg----------~~~ 243 (559)
.-++|+.+++.+.....+.+| ..+++ .....+. . ..+ .+...++|+.+++++ ..+
T Consensus 219 ~~~~~~~l~~~~~~~~~i~~~d~~~~~---~~~~~~~--~--------~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i 285 (433)
T 3bws_A 219 YDPIRDLVYCSNWISEDISVIDRKTKL---EIRKTDK--I--------GLPRGLLLSKDGKELYIAQFSASNQESGGGRL 285 (433)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTTTE---EEEECCC--C--------SEEEEEEECTTSSEEEEEEEESCTTCSCCEEE
T ss_pred EcCCCCEEEEEecCCCcEEEEECCCCc---EEEEecC--C--------CCceEEEEcCCCCEEEEEECCCCccccCCCeE
Confidence 556776554444333456677 44331 1111111 0 112 233446886666554 256
Q ss_pred EEeeCCCCeEEEECCCCCCCCCcccCCCceeecccccccccccccCc-EEEEEcCCCCccccccccccccccccCceEEE
Q 048136 244 ILLDPRANYVLREYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDA-EVLICGGSVPEAFYFGEVEKRLVPALDDCARM 322 (559)
Q Consensus 244 e~yDp~t~~W~~~~p~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~g-kI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~ 322 (559)
.+||..+++....+. .+ ..+ ..+.+ . .++ .+|+.++.+ ..+.+|
T Consensus 286 ~~~d~~~~~~~~~~~-~~----~~~---~~~~~--~--------~~g~~l~~~~~~~-----------------~~v~v~ 330 (433)
T 3bws_A 286 GIYSMDKEKLIDTIG-PP----GNK---RHIVS--G--------NTENKIYVSDMCC-----------------SKIEVY 330 (433)
T ss_dssp EEEETTTTEEEEEEE-EE----ECE---EEEEE--C--------SSTTEEEEEETTT-----------------TEEEEE
T ss_pred EEEECCCCcEEeecc-CC----CCc---ceEEE--C--------CCCCEEEEEecCC-----------------CEEEEE
Confidence 789998887553221 01 011 11111 1 134 677776543 234456
Q ss_pred EecCCCCceeee-cCCCCcccccEEEeeCCeEEEEcCcCCCCC--CccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCc
Q 048136 323 VVTSPDPVWTTE-KMPTPRVMSDGVLLPTGDVLLINGAELGSA--GWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPR 399 (559)
Q Consensus 323 d~~~~~~~W~~~-~M~~~R~~~~av~LpdG~V~vvGG~~~g~~--g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R 399 (559)
|+.. .+.. .++....-.....-|||+.+++++...+.. .+-.....--.+.+||.++. +....-.. ..
T Consensus 331 d~~~----~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~---~~~~~~~~--~~ 401 (433)
T 3bws_A 331 DLKE----KKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTD---TVKEFWEA--GN 401 (433)
T ss_dssp ETTT----TEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTT---EEEEEEEC--SS
T ss_pred ECCC----CcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCC---cEEEEecC--CC
Confidence 6542 1211 121111122245668898666655431100 00000000126899999876 54332111 11
Q ss_pred cceeeeEECCCCceEEeCCC
Q 048136 400 MYHSVANLLPDGRVFVGGSN 419 (559)
Q Consensus 400 ~yhs~a~llpdG~Vlv~GG~ 419 (559)
. -....+.|||+.+++++.
T Consensus 402 ~-~~~~~~s~dg~~l~~~~~ 420 (433)
T 3bws_A 402 Q-PTGLDVSPDNRYLVISDF 420 (433)
T ss_dssp S-EEEEEECTTSCEEEEEET
T ss_pred C-CceEEEcCCCCEEEEEEC
Confidence 1 123456799988776653
No 36
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.60 E-value=0.0068 Score=59.81 Aligned_cols=203 Identities=13% Similarity=0.123 Sum_probs=108.8
Q ss_pred eEEEeCCCCC--EEeCccCCC-cccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEcc
Q 048136 102 SVFYNVNTLQ--VTPLKVITD-TWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLA 178 (559)
Q Consensus 102 ~~~yDp~t~~--w~~~~~~~~-~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~ 178 (559)
..++|+++++ |+.- ... ..+....+++||++|+.+ .+.+..|||...-.|+--.. .....+++..++
T Consensus 17 v~~~d~~tG~~~w~~~--~~~~~~~~~~~~~pdG~ilvs~-----~~~V~~~d~~G~~~W~~~~~---~~~~~~~~~~~~ 86 (276)
T 3no2_A 17 IAIINKDTKEIVWEYP--LEKGWECNSVAATKAGEILFSY-----SKGAKMITRDGRELWNIAAP---AGCEMQTARILP 86 (276)
T ss_dssp EEEEETTTTEEEEEEE--CCTTCCCCEEEECTTSCEEEEC-----BSEEEEECTTSCEEEEEECC---TTCEEEEEEECT
T ss_pred EEEEECCCCeEEEEeC--CCccCCCcCeEECCCCCEEEeC-----CCCEEEECCCCCEEEEEcCC---CCccccccEECC
Confidence 5678887775 4321 111 234455678899999953 25689999952335754321 111234677889
Q ss_pred CCcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEec--CcEEEeeCCCC-eEE
Q 048136 179 DGSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN--NRSILLDPRAN-YVL 254 (559)
Q Consensus 179 dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg--~~~e~yDp~t~-~W~ 254 (559)
||++++....+...+-.+ | +++ .-|..... ..... .......+...++|++++... ..+.+||++.+ .|.
T Consensus 87 dG~~lv~~~~~~~~v~~vd~-~Gk-~l~~~~~~--~~~~~--~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~G~~~w~ 160 (276)
T 3no2_A 87 DGNALVAWCGHPSTILEVNM-KGE-VLSKTEFE--TGIER--PHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQLLNS 160 (276)
T ss_dssp TSCEEEEEESTTEEEEEECT-TSC-EEEEEEEC--CSCSS--GGGSCSCCEECTTSCEEEEETTTTEEEEECTTSCEEEE
T ss_pred CCCEEEEecCCCCEEEEEeC-CCC-EEEEEecc--CCCCc--ccccccCceECCCCCEEEEecCCCEEEEECCCCCEEEE
Confidence 999999865422223333 4 221 11222111 00000 001122334677999888763 56889999833 344
Q ss_pred EECCCCCCCCCcccCCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeee
Q 048136 255 REYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTE 334 (559)
Q Consensus 255 ~~~p~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~ 334 (559)
...+ ..|. ++..+ .+|.+++++... ..+..+|+.+..-.|+..
T Consensus 161 ~~~~-------~~~~--~~~~~-----------~~g~~~v~~~~~-----------------~~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 161 VKLS-------GTPF--SSAFL-----------DNGDCLVACGDA-----------------HCFVQLNLESNRIVRRVN 203 (276)
T ss_dssp EECS-------SCCC--EEEEC-----------TTSCEEEECBTT-----------------SEEEEECTTTCCEEEEEE
T ss_pred EECC-------CCcc--ceeEc-----------CCCCEEEEeCCC-----------------CeEEEEeCcCCcEEEEec
Confidence 3221 1221 22223 278888877543 134556665444568764
Q ss_pred --cCCCCcc--cccEEEeeCCeEEEEc
Q 048136 335 --KMPTPRV--MSDGVLLPTGDVLLIN 357 (559)
Q Consensus 335 --~M~~~R~--~~~av~LpdG~V~vvG 357 (559)
..+..|. ......++||.|||..
T Consensus 204 ~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 204 ANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp GGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred CCCCCCccccccccceEcCCCCEEEEe
Confidence 3332231 2335678999999987
No 37
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.58 E-value=0.039 Score=56.38 Aligned_cols=87 Identities=8% Similarity=-0.081 Sum_probs=53.9
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccc-cccccceEEEccCC
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALK-DGRWYATQALLADG 180 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~-~~R~y~s~~~L~dG 180 (559)
..+||..+++-...-..+..........++|+++++|+.. ..+++||.. +.+-. .. +. +...-.+++..++|
T Consensus 121 i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d---~~i~iwd~~-~~~~~--~~-~~~h~~~v~~~~~~~~~ 193 (420)
T 3vl1_A 121 IKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQD---MQLKIWSVK-DGSNP--RT-LIGHRATVTDIAIIDRG 193 (420)
T ss_dssp EEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETT---SEEEEEETT-TCCCC--EE-EECCSSCEEEEEEETTT
T ss_pred EEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCC---CeEEEEeCC-CCcCc--eE-EcCCCCcEEEEEEcCCC
Confidence 6788888776554433333333344566799999998863 589999987 44321 11 22 22223345566789
Q ss_pred cEEEEcCCCCCceeEE
Q 048136 181 SFLIFGGRDSFSYEYI 196 (559)
Q Consensus 181 ~VyvvGG~~~~s~E~y 196 (559)
+.++.|+.++ .+.+|
T Consensus 194 ~~l~s~~~d~-~v~iw 208 (420)
T 3vl1_A 194 RNVLSASLDG-TIRLW 208 (420)
T ss_dssp TEEEEEETTS-CEEEE
T ss_pred CEEEEEcCCC-cEEEe
Confidence 9999888764 45566
No 38
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.55 E-value=0.024 Score=57.40 Aligned_cols=244 Identities=13% Similarity=0.099 Sum_probs=122.3
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcE-EEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCC
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNL-ISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADG 180 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i-~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG 180 (559)
..+||..+++....-..+. .....++.+||+. ++.|+. + ..+++||.. +.+.... +.....-.+++.-+||
T Consensus 14 v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~-d--~~i~v~d~~-~~~~~~~---~~~~~~v~~~~~spdg 85 (391)
T 1l0q_A 14 ISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAH-S--NDVSIIDTA-TNNVIAT---VPAGSSPQGVAVSPDG 85 (391)
T ss_dssp EEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGG-G--TEEEEEETT-TTEEEEE---EECSSSEEEEEECTTS
T ss_pred EEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCC-C--CeEEEEECC-CCeEEEE---EECCCCccceEECCCC
Confidence 5678877766543222221 1223445678874 566644 2 589999997 6654332 3333333455566788
Q ss_pred cEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCc-EEEEec--CcEEEeeCCCCeEEEE
Q 048136 181 SFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGN-LYIFAN--NRSILLDPRANYVLRE 256 (559)
Q Consensus 181 ~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~-iyv~Gg--~~~e~yDp~t~~W~~~ 256 (559)
+.++++|.....+.+| ..+++ . ...+ ... ..-..+...++|+ ||+.+. ..+.+||..+++....
T Consensus 86 ~~l~~~~~~~~~v~v~d~~~~~---~--~~~~-~~~------~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~ 153 (391)
T 1l0q_A 86 KQVYVTNMASSTLSVIDTTSNT---V--AGTV-KTG------KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINT 153 (391)
T ss_dssp SEEEEEETTTTEEEEEETTTTE---E--EEEE-ECS------SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CEEEEEECCCCEEEEEECCCCe---E--EEEE-eCC------CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEE
Confidence 8655555554567777 54431 1 1111 110 0111233456887 556654 4688999998876643
Q ss_pred CCCCCCCCCcccCCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeeecC
Q 048136 257 YPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTEKM 336 (559)
Q Consensus 257 ~p~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M 336 (559)
+.. . ..+ ..+.+ .+ .+..||+.++.+ ..+..+|+.. .+.... .
T Consensus 154 ~~~-~----~~~---~~~~~--~~-------dg~~l~~~~~~~-----------------~~v~~~d~~~--~~~~~~-~ 196 (391)
T 1l0q_A 154 VSV-G----RSP---KGIAV--TP-------DGTKVYVANFDS-----------------MSISVIDTVT--NSVIDT-V 196 (391)
T ss_dssp EEC-C----SSE---EEEEE--CT-------TSSEEEEEETTT-----------------TEEEEEETTT--TEEEEE-E
T ss_pred Eec-C----CCc---ceEEE--CC-------CCCEEEEEeCCC-----------------CEEEEEECCC--CeEEEE-E
Confidence 321 1 111 12211 11 134566766543 2345566543 221111 1
Q ss_pred CCCcccccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEE-ecCCCCCCccceeeeEECCCCc-eE
Q 048136 337 PTPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFT-ELAPSDIPRMYHSVANLLPDGR-VF 414 (559)
Q Consensus 337 ~~~R~~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt-~~~~~~~~R~yhs~a~llpdG~-Vl 414 (559)
.....-......+||+.+++++.... -..+.+||..+. +-. .+... . ......+.|||+ |+
T Consensus 197 ~~~~~~~~~~~~~~g~~l~~~~~~~~----------~~~v~~~d~~~~---~~~~~~~~~---~-~~~~~~~s~dg~~l~ 259 (391)
T 1l0q_A 197 KVEAAPSGIAVNPEGTKAYVTNVDKY----------FNTVSMIDTGTN---KITARIPVG---P-DPAGIAVTPDGKKVY 259 (391)
T ss_dssp ECSSEEEEEEECTTSSEEEEEEECSS----------CCEEEEEETTTT---EEEEEEECC---S-SEEEEEECTTSSEEE
T ss_pred ecCCCccceEECCCCCEEEEEecCcC----------CCcEEEEECCCC---eEEEEEecC---C-CccEEEEccCCCEEE
Confidence 11111122345688977666653210 126889999876 432 22211 1 122355789997 55
Q ss_pred EeCCC
Q 048136 415 VGGSN 419 (559)
Q Consensus 415 v~GG~ 419 (559)
++++.
T Consensus 260 ~s~~~ 264 (391)
T 1l0q_A 260 VALSF 264 (391)
T ss_dssp EEETT
T ss_pred EEcCC
Confidence 67654
No 39
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.54 E-value=0.0087 Score=61.60 Aligned_cols=248 Identities=12% Similarity=0.047 Sum_probs=130.5
Q ss_pred eEEEeCCCCCEEeCccC-CCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCC
Q 048136 102 SVFYNVNTLQVTPLKVI-TDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADG 180 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~-~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG 180 (559)
..+||..+++....... +..........+||+++++|+. + ..+.+||.. +.+.... +......-..... ++
T Consensus 115 v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~-d--g~i~iwd~~-~~~~~~~---~~~~~~~v~~~~~-~~ 186 (401)
T 4aez_A 115 VYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLG-N--GLVDIYDVE-SQTKLRT---MAGHQARVGCLSW-NR 186 (401)
T ss_dssp EEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEET-T--SCEEEEETT-TCCEEEE---ECCCSSCEEEEEE-ET
T ss_pred EEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECC-C--CeEEEEECc-CCeEEEE---ecCCCCceEEEEE-CC
Confidence 78899998887655433 2322233455679999999886 3 478999987 5543221 2222222233334 78
Q ss_pred cEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEec--CcEEEeeCCCCeEEEEC
Q 048136 181 SFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN--NRSILLDPRANYVLREY 257 (559)
Q Consensus 181 ~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg--~~~e~yDp~t~~W~~~~ 257 (559)
++++.|+.++ .+.+| .... ......+ .... ..-..+...++|++++.|+ ..+.+||..+.+-...+
T Consensus 187 ~~l~~~~~dg-~i~i~d~~~~----~~~~~~~-~~~~-----~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~ 255 (401)
T 4aez_A 187 HVLSSGSRSG-AIHHHDVRIA----NHQIGTL-QGHS-----SEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTK 255 (401)
T ss_dssp TEEEEEETTS-EEEEEETTSS----SCEEEEE-ECCS-----SCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEE
T ss_pred CEEEEEcCCC-CEEEEecccC----cceeeEE-cCCC-----CCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEe
Confidence 8888888764 45666 3321 1111111 1110 0111233456899998886 46889999887544333
Q ss_pred CCCCCCCCcccCCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeeecCC
Q 048136 258 PPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTEKMP 337 (559)
Q Consensus 258 p~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~ 337 (559)
.... .+ -.++.+ .+ .+..++++||...+ ..+..+|+.. .+-.. .+.
T Consensus 256 ~~~~-----~~--v~~~~~--~p-------~~~~ll~~~~gs~d---------------~~i~i~d~~~--~~~~~-~~~ 301 (401)
T 4aez_A 256 TNHN-----AA--VKAVAW--CP-------WQSNLLATGGGTMD---------------KQIHFWNAAT--GARVN-TVD 301 (401)
T ss_dssp CCCS-----SC--CCEEEE--CT-------TSTTEEEEECCTTT---------------CEEEEEETTT--CCEEE-EEE
T ss_pred cCCc-----ce--EEEEEE--CC-------CCCCEEEEecCCCC---------------CEEEEEECCC--CCEEE-EEe
Confidence 2110 01 112211 11 24567777752111 2344566543 11111 111
Q ss_pred CCcccccEEEeeCCeEEEE--cCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCC--CCCccceeeeEECCCCce
Q 048136 338 TPRVMSDGVLLPTGDVLLI--NGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPS--DIPRMYHSVANLLPDGRV 413 (559)
Q Consensus 338 ~~R~~~~av~LpdG~V~vv--GG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~--~~~R~yhs~a~llpdG~V 413 (559)
....-.+....++|+.+++ |..+ | .+.+||..+. +......+ ...+. ....+.|||+.
T Consensus 302 ~~~~v~~~~~s~~~~~l~~~~g~~d-g------------~i~v~~~~~~---~~~~~~~~~~h~~~v--~~~~~s~dg~~ 363 (401)
T 4aez_A 302 AGSQVTSLIWSPHSKEIMSTHGFPD-N------------NLSIWSYSSS---GLTKQVDIPAHDTRV--LYSALSPDGRI 363 (401)
T ss_dssp CSSCEEEEEECSSSSEEEEEECTTT-C------------EEEEEEEETT---EEEEEEEEECCSSCC--CEEEECTTSSE
T ss_pred CCCcEEEEEECCCCCeEEEEeecCC-C------------cEEEEecCCc---cceeEEEecCCCCCE--EEEEECCCCCE
Confidence 1111222345678888777 4332 1 6789998876 55543221 11222 23467899999
Q ss_pred EEeCCCC
Q 048136 414 FVGGSND 420 (559)
Q Consensus 414 lv~GG~~ 420 (559)
+++|+.+
T Consensus 364 l~s~~~d 370 (401)
T 4aez_A 364 LSTAASD 370 (401)
T ss_dssp EEEECTT
T ss_pred EEEEeCC
Confidence 9998864
No 40
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.52 E-value=0.074 Score=51.24 Aligned_cols=240 Identities=13% Similarity=0.057 Sum_probs=118.4
Q ss_pred eEEEeCCCCCEEeCccC-CCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccc-cccccceEEEccC
Q 048136 102 SVFYNVNTLQVTPLKVI-TDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALK-DGRWYATQALLAD 179 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~-~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~-~~R~y~s~~~L~d 179 (559)
...||+. ++++..... ......+-+...+|++++.... ...+.+||+. .++.... ++ ....-.+.+.-++
T Consensus 38 v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~i~~~~~~--g~~~~~~--~~~~~~~~~~i~~~~~ 109 (299)
T 2z2n_A 38 ISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENA---ANKIGRITKK--GIIKEYT--LPNPDSAPYGITEGPN 109 (299)
T ss_dssp EEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETT---TTEEEEECTT--SCEEEEE--CSSTTCCEEEEEECTT
T ss_pred EEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCC---CCeEEEECCC--CcEEEEe--CCCcCCCceeeEECCC
Confidence 5678887 777654422 1122222334578999998542 2468889986 3444332 11 1222234555668
Q ss_pred CcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccce-EEEeeCCcEEEEec--CcEEEeeCCCCeEEE
Q 048136 180 GSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPF-VYLVPDGNLYIFAN--NRSILLDPRANYVLR 255 (559)
Q Consensus 180 G~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~-~~~l~~G~iyv~Gg--~~~e~yDp~t~~W~~ 255 (559)
|++|+..... ..+.+| + +++ ... ...... ...+. ....++|+||+... ..+.+||+ +++...
T Consensus 110 g~l~v~~~~~-~~i~~~d~-~g~---~~~-~~~~~~-------~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~ 175 (299)
T 2z2n_A 110 GDIWFTEMNG-NRIGRITD-DGK---IRE-YELPNK-------GSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITE 175 (299)
T ss_dssp SCEEEEETTT-TEEEEECT-TCC---EEE-EECSST-------TCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE
T ss_pred CCEEEEecCC-ceEEEECC-CCC---EEE-ecCCCC-------CCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEE
Confidence 9999975432 234455 4 321 111 111000 01222 33445899998763 56889999 666653
Q ss_pred ECCCCCCCCCcccCCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeeec
Q 048136 256 EYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTEK 335 (559)
Q Consensus 256 ~~p~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~ 335 (559)
++ ++. ....| .++.+. .+++||+..... ..+.+||+ + .++....
T Consensus 176 -~~-~~~-~~~~~---~~i~~~----------~~g~l~v~~~~~-----------------~~i~~~~~-~--g~~~~~~ 219 (299)
T 2z2n_A 176 -FK-IPT-PASGP---VGITKG----------NDDALWFVEIIG-----------------NKIGRITT-S--GEITEFK 219 (299)
T ss_dssp -EE-CSS-TTCCE---EEEEEC----------TTSSEEEEETTT-----------------TEEEEECT-T--CCEEEEE
T ss_pred -ee-CCC-CCCcc---eeEEEC----------CCCCEEEEccCC-----------------ceEEEECC-C--CcEEEEE
Confidence 21 121 11112 122221 257888875322 22345554 2 2333222
Q ss_pred CCCCcccc-cEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCccceeeeEECCCCceE
Q 048136 336 MPTPRVMS-DGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANLLPDGRVF 414 (559)
Q Consensus 336 M~~~R~~~-~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~llpdG~Vl 414 (559)
++...... +.+.-++|+||+..... ..+.+||| +. +.....-......-++.+. +||++|
T Consensus 220 ~~~~~~~~~~i~~~~~g~l~v~~~~~-------------~~i~~~d~-~g---~~~~~~~~~~~~~~~~i~~--~~g~l~ 280 (299)
T 2z2n_A 220 IPTPNARPHAITAGAGIDLWFTEWGA-------------NKIGRLTS-NN---IIEEYPIQIKSAEPHGICF--DGETIW 280 (299)
T ss_dssp CSSTTCCEEEEEECSTTCEEEEETTT-------------TEEEEEET-TT---EEEEEECSSSSCCEEEEEE--CSSCEE
T ss_pred CCCCCCCceeEEECCCCCEEEeccCC-------------ceEEEECC-CC---ceEEEeCCCCCCccceEEe--cCCCEE
Confidence 22111112 13344789999875221 15788998 34 5544321110111233343 999999
Q ss_pred EeCC
Q 048136 415 VGGS 418 (559)
Q Consensus 415 v~GG 418 (559)
++..
T Consensus 281 v~~~ 284 (299)
T 2z2n_A 281 FAME 284 (299)
T ss_dssp EEET
T ss_pred EEec
Confidence 9864
No 41
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.51 E-value=0.074 Score=53.94 Aligned_cols=241 Identities=12% Similarity=0.130 Sum_probs=116.4
Q ss_pred eEEEeCCCCC--EEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCC--eecCCC-ccccccccceEEE
Q 048136 102 SVFYNVNTLQ--VTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCD--WTEYPT-ALKDGRWYATQAL 176 (559)
Q Consensus 102 ~~~yDp~t~~--w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~--W~~~~~-~m~~~R~y~s~~~ 176 (559)
..++|+++++ |+.- ...... ...++.+|+||+.... ..+..||+. +.+ |..-.. .....+...+.+.
T Consensus 115 l~a~d~~tG~~~W~~~--~~~~~~-~~p~~~~~~v~v~~~~----g~l~~~d~~-tG~~~W~~~~~~~~~~~~~~~~~~~ 186 (376)
T 3q7m_A 115 VYALNTSDGTVAWQTK--VAGEAL-SRPVVSDGLVLIHTSN----GQLQALNEA-DGAVKWTVNLDMPSLSLRGESAPTT 186 (376)
T ss_dssp EEEEETTTCCEEEEEE--CSSCCC-SCCEEETTEEEEECTT----SEEEEEETT-TCCEEEEEECCC-----CCCCCCEE
T ss_pred EEEEECCCCCEEEEEe--CCCceE-cCCEEECCEEEEEcCC----CeEEEEECC-CCcEEEEEeCCCCceeecCCCCcEE
Confidence 5778988776 5432 111111 2234457777775432 478899987 554 865321 0111122233333
Q ss_pred ccCCcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccc---cCCccceEEEeeCCcEEEEe-cCcEEEeeCCCC
Q 048136 177 LADGSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVL---ENNLYPFVYLVPDGNLYIFA-NNRSILLDPRAN 251 (559)
Q Consensus 177 L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~---~~~~yp~~~~l~~G~iyv~G-g~~~e~yDp~t~ 251 (559)
. +|.||+ |..+ ..+-.+ +++++ ..|...........+.. .....| ++.+|.||+.+ +..+.++|++++
T Consensus 187 ~-~~~v~~-g~~~-g~l~~~d~~tG~-~~w~~~~~~~~~~~~~~~~~~~~~~p---~~~~~~v~~~~~~g~l~~~d~~tG 259 (376)
T 3q7m_A 187 A-FGAAVV-GGDN-GRVSAVLMEQGQ-MIWQQRISQATGSTEIDRLSDVDTTP---VVVNGVVFALAYNGNLTALDLRSG 259 (376)
T ss_dssp E-TTEEEE-CCTT-TEEEEEETTTCC-EEEEEECCC-----------CCCCCC---EEETTEEEEECTTSCEEEEETTTC
T ss_pred E-CCEEEE-EcCC-CEEEEEECCCCc-EEEEEecccCCCCcccccccccCCCc---EEECCEEEEEecCcEEEEEECCCC
Confidence 3 777766 4322 223444 55443 23432221100000000 000112 34588888876 346889999887
Q ss_pred e--EEEECCCCCCCCCcccCCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCC
Q 048136 252 Y--VLREYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDP 329 (559)
Q Consensus 252 ~--W~~~~p~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~ 329 (559)
+ |.... + .. ....+ .+++||+.... ..+.++|+.+...
T Consensus 260 ~~~w~~~~---~----~~----~~~~~-----------~~~~l~~~~~~------------------g~l~~~d~~tG~~ 299 (376)
T 3q7m_A 260 QIMWKREL---G----SV----NDFIV-----------DGNRIYLVDQN------------------DRVMALTIDGGVT 299 (376)
T ss_dssp CEEEEECC---C----CE----EEEEE-----------ETTEEEEEETT------------------CCEEEEETTTCCE
T ss_pred cEEeeccC---C----CC----CCceE-----------ECCEEEEEcCC------------------CeEEEEECCCCcE
Confidence 4 54311 1 01 11111 36788876532 2345677665445
Q ss_pred ceeeecCCCCcccccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCccceeeeEECC
Q 048136 330 VWTTEKMPTPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANLLP 409 (559)
Q Consensus 330 ~W~~~~M~~~R~~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~llp 409 (559)
.|+...+.... .. ..++.+++||+... . | .+.+||+++.+- .|+.-.. ......+.+ ..
T Consensus 300 ~w~~~~~~~~~-~~-~~~~~~~~l~v~~~-~-g------------~l~~~d~~tG~~-~~~~~~~--~~~~~~~~~--~~ 358 (376)
T 3q7m_A 300 LWTQSDLLHRL-LT-SPVLYNGNLVVGDS-E-G------------YLHWINVEDGRF-VAQQKVD--SSGFQTEPV--AA 358 (376)
T ss_dssp EEEECTTTTSC-CC-CCEEETTEEEEECT-T-S------------EEEEEETTTCCE-EEEEECC--TTCBCSCCE--EE
T ss_pred EEeecccCCCc-cc-CCEEECCEEEEEeC-C-C------------eEEEEECCCCcE-EEEEecC--CCcceeCCE--EE
Confidence 68765343322 22 23445888887532 1 1 578999988621 3654221 111222222 24
Q ss_pred CCceEEeCC
Q 048136 410 DGRVFVGGS 418 (559)
Q Consensus 410 dG~Vlv~GG 418 (559)
+|+||+...
T Consensus 359 ~~~l~v~~~ 367 (376)
T 3q7m_A 359 DGKLLIQAK 367 (376)
T ss_dssp TTEEEEEBT
T ss_pred CCEEEEEeC
Confidence 888888654
No 42
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.50 E-value=0.051 Score=53.56 Aligned_cols=130 Identities=11% Similarity=0.112 Sum_probs=69.6
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCc-EEEEcCCCCCCCeEEEEeCCCCCCe-ecCCCccccccccce-EEEcc
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGN-LISTGGFLGGSRTTRYLWGCPTCDW-TEYPTALKDGRWYAT-QALLA 178 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~-i~v~GG~~~g~~~v~~ydp~~t~~W-~~~~~~m~~~R~y~s-~~~L~ 178 (559)
..+||+.+++............ ..++-+||+ +|+.+.. ...+++||+. +.+. ... +........ .+.-+
T Consensus 22 v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~---~~~i~~~d~~-~~~~~~~~---~~~~~~~~~~~~~s~ 93 (331)
T 3u4y_A 22 ISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDF---CQTLVQIETQ-LEPPKVVA---IQEGQSSMADVDITP 93 (331)
T ss_dssp EEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEEST---TCEEEEEECS-SSSCEEEE---EEECSSCCCCEEECT
T ss_pred EEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCC---CCeEEEEECC-CCceeEEe---cccCCCCccceEECC
Confidence 6789999888765433322222 345567887 5555542 2589999998 6654 211 222222222 56667
Q ss_pred CCcEEEEcCCCCC--ceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCc-EEEEec--Cc-EEEeeCCCC
Q 048136 179 DGSFLIFGGRDSF--SYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGN-LYIFAN--NR-SILLDPRAN 251 (559)
Q Consensus 179 dG~VyvvGG~~~~--s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~-iyv~Gg--~~-~e~yDp~t~ 251 (559)
||+.++++...+. .+.+| ..+++ .....+. . ..-..+...+||+ ||+.+. .. +.+||...+
T Consensus 94 dg~~l~~~~~~~~~~~i~v~d~~~~~---~~~~~~~--~-------~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~ 161 (331)
T 3u4y_A 94 DDQFAVTVTGLNHPFNMQSYSFLKNK---FISTIPI--P-------YDAVGIAISPNGNGLILIDRSSANTVRRFKIDAD 161 (331)
T ss_dssp TSSEEEECCCSSSSCEEEEEETTTTE---EEEEEEC--C-------TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTT
T ss_pred CCCEEEEecCCCCcccEEEEECCCCC---eEEEEEC--C-------CCccceEECCCCCEEEEEecCCCceEEEEEECCC
Confidence 8886555544333 67777 44431 1111111 0 0112344567886 777643 45 777876543
No 43
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=97.45 E-value=0.03 Score=60.05 Aligned_cols=241 Identities=11% Similarity=0.072 Sum_probs=124.9
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCc
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGS 181 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~ 181 (559)
..+||........+.. +.....+.++.+||+.+++|+. + ..+++||.. ...-..+. .....-.+++.-+||+
T Consensus 327 i~~w~~~~~~~~~~~~-~~~~v~~~~~s~~g~~l~~~~~-d--g~v~~~~~~-~~~~~~~~---~~~~~v~~~~~s~dg~ 398 (577)
T 2ymu_A 327 VKLWNRNGQHLQTLTG-HSSSVWGVAFSPDGQTIASASD-D--KTVKLWNRN-GQLLQTLT---GHSSSVRGVAFSPDGQ 398 (577)
T ss_dssp EEEEETTSCEEEEECC-CSSCEEEEEECTTSSEEEEEET-T--SEEEEEETT-CCEEEEEE---CCSSCEEEEEECTTSS
T ss_pred EEEEeCCCCeeEEEeC-CCCCEEEEEECCCCCEEEEEeC-C--CEEEEEcCC-CCEEEEec---CCCCCeEEEEECCCCC
Confidence 5677776655444332 2222223456689999999876 2 478899965 33222211 1111223455567999
Q ss_pred EEEEcCCCCCceeEEcCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEecC--cEEEeeCCCCeEEEECCC
Q 048136 182 FLIFGGRDSFSYEYIPAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFANN--RSILLDPRANYVLREYPP 259 (559)
Q Consensus 182 VyvvGG~~~~s~E~yP~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg~--~~e~yDp~t~~W~~~~p~ 259 (559)
.++.|+.+. .+.+|..+. .....+ .... ..-..+...+|+++++.++. .+.+||....... .+..
T Consensus 399 ~l~~~~~d~-~v~~~~~~~-----~~~~~~-~~~~-----~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~~-~~~~ 465 (577)
T 2ymu_A 399 TIASASDDK-TVKLWNRNG-----QLLQTL-TGHS-----SSVWGVAFSPDDQTIASASDDKTVKLWNRNGQLLQ-TLTG 465 (577)
T ss_dssp CEEEEETTS-EEEEECTTC-----CEEEEE-ECCS-----SCEEEEEECTTSSEEEEEETTSEEEEEETTSCEEE-EEEC
T ss_pred EEEEEeCCC-EEEEEeCCC-----CEEEEe-cCCC-----CCeEEEEECCCCCEEEEEcCCCEEEEEECCCCEEE-EEcC
Confidence 999888653 456663322 111111 1100 01112334578998888763 5788997554432 2311
Q ss_pred CCCCCCcccCCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeee-cCCC
Q 048136 260 LPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTE-KMPT 338 (559)
Q Consensus 260 mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~ 338 (559)
- . .+ -.++.+ . .++++++.|+.+. .+..+|.. .+-... .-..
T Consensus 466 ~----~-~~--v~~~~~--s--------pd~~~las~~~d~-----------------~i~iw~~~---~~~~~~~~~h~ 508 (577)
T 2ymu_A 466 H----S-SS--VRGVAF--S--------PDGQTIASASDDK-----------------TVKLWNRN---GQLLQTLTGHS 508 (577)
T ss_dssp C----S-SC--EEEEEE--C--------TTSCEEEEEETTS-----------------EEEEEETT---SCEEEEEECCS
T ss_pred C----C-CC--EEEEEE--c--------CCCCEEEEEeCCC-----------------EEEEEcCC---CCEEEEEeCCC
Confidence 0 0 00 011211 1 2788888887652 23334422 111111 1122
Q ss_pred CcccccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCccceeeeEECCCCceEEeCC
Q 048136 339 PRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANLLPDGRVFVGGS 418 (559)
Q Consensus 339 ~R~~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~llpdG~Vlv~GG 418 (559)
.+... ....|||+.++.++.+ + .+.+||.... ....+... ..+. ....+.|||+.|++||
T Consensus 509 ~~v~~-l~~s~dg~~l~s~~~d-g------------~v~lwd~~~~---~~~~~~~h-~~~v--~~~~fs~dg~~l~s~~ 568 (577)
T 2ymu_A 509 SSVRG-VAFSPDGQTIASASDD-K------------TVKLWNRNGQ---LLQTLTGH-SSSV--WGVAFSPDGQTIASAS 568 (577)
T ss_dssp SCEEE-EEECTTSSCEEEEETT-S------------EEEEECTTSC---EEEEEECC-SSCE--EEEEECTTSSCEEEEE
T ss_pred CCEEE-EEEcCCCCEEEEEECc-C------------EEEEEeCCCC---EEEEEcCC-CCCE--EEEEEcCCCCEEEEEe
Confidence 22322 3456899999998764 1 6789996433 44443221 1111 2345789999999988
Q ss_pred CC
Q 048136 419 ND 420 (559)
Q Consensus 419 ~~ 420 (559)
.+
T Consensus 569 ~D 570 (577)
T 2ymu_A 569 SD 570 (577)
T ss_dssp TT
T ss_pred CC
Confidence 64
No 44
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.44 E-value=0.024 Score=58.00 Aligned_cols=235 Identities=14% Similarity=0.149 Sum_probs=118.4
Q ss_pred eecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccc-cccccceEEEccCCcEEEEcCCCCCceeEE-cCCCCC-C
Q 048136 127 GLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALK-DGRWYATQALLADGSFLIFGGRDSFSYEYI-PAERTE-N 203 (559)
Q Consensus 127 ~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~-~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~-~ 203 (559)
..-+||+.++.|+. | ..+++||.. +.+-... +. +..+-.+++.-+||+.++.||.+. .+.+| ...... .
T Consensus 73 ~~sp~~~~l~s~s~-D--~~v~iWd~~-~~~~~~~---~~~h~~~v~~~~~s~~g~~las~~~d~-~v~iw~~~~~~~~~ 144 (380)
T 3iz6_a 73 DWTPEKNWIVSASQ-D--GRLIVWNAL-TSQKTHA---IKLHCPWVMECAFAPNGQSVACGGLDS-ACSIFNLSSQADRD 144 (380)
T ss_dssp EECTTSSCEEEEET-T--SEEEEEETT-TTEEEEE---EECCCTTCCCCEECTTSSEEEECCSSS-CCEEEECCCCSSCC
T ss_pred EEcCCCCEEEEEeC-C--CeEEEEECC-CCccceE---EecCCCCEEEEEECCCCCEEEEeeCCC-cEEEEECCCCcccc
Confidence 45578999999987 3 589999987 5543221 11 223444566678999999999875 45566 221100 0
Q ss_pred CcceeccccccccccccCCccceEEEee-CCcEEEEec--CcEEEeeCCCCeEEEECC-CCCCCCCcccCCCceeecccc
Q 048136 204 AYSIPFQFLRDTYDVLENNLYPFVYLVP-DGNLYIFAN--NRSILLDPRANYVLREYP-PLPGGARNYPSTSTSVLLPLK 279 (559)
Q Consensus 204 ~w~~~~p~l~~~~d~~~~~~yp~~~~l~-~G~iyv~Gg--~~~e~yDp~t~~W~~~~p-~mp~~~~~~p~~g~~v~lpl~ 279 (559)
........+....+ ... .+...+ ++..++.|+ ..+.+||..+++-...+. ..+.+ +......+...
T Consensus 145 ~~~~~~~~~~gh~~----~v~-~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~-----h~~~v~~~~~~ 214 (380)
T 3iz6_a 145 GNMPVSRVLTGHKG----YAS-SCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSG-----HTADVLSLSIN 214 (380)
T ss_dssp CSSTTCCBCCCCSS----CCC-CCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSS-----CCSCEEEEEEC
T ss_pred CCccceeeccCCCc----ceE-EEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCC-----CccCeEEEEee
Confidence 00000011111100 000 011123 244455554 468899999886553231 11110 11111111110
Q ss_pred cccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeeecCCCCcccccEEEeeCCeEEEEcCc
Q 048136 280 LYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTEKMPTPRVMSDGVLLPTGDVLLINGA 359 (559)
Q Consensus 280 ~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~R~~~~av~LpdG~V~vvGG~ 359 (559)
..++.+++.|+.+. ++..+|+......-....-....... ....|||+.++.|+.
T Consensus 215 -------~~~~~~l~sgs~D~-----------------~v~~wd~~~~~~~~~~~~~h~~~v~~-v~~~p~~~~l~s~s~ 269 (380)
T 3iz6_a 215 -------SLNANMFISGSCDT-----------------TVRLWDLRITSRAVRTYHGHEGDINS-VKFFPDGQRFGTGSD 269 (380)
T ss_dssp -------SSSCCEEEEEETTS-----------------CEEEEETTTTCCCCEEECCCSSCCCE-EEECTTSSEEEEECS
T ss_pred -------cCCCCEEEEEECCC-----------------eEEEEECCCCCcceEEECCcCCCeEE-EEEecCCCeEEEEcC
Confidence 13678888888652 34556654211111111112222222 345689999999986
Q ss_pred CCCCCCccCCCCCCcccEEEeCCCCCCCeEE-ecCCCCC----CccceeeeEECCCCceEEeCCCC
Q 048136 360 ELGSAGWKDADKPCFKPLLYKPSKPPGSRFT-ELAPSDI----PRMYHSVANLLPDGRVFVGGSND 420 (559)
Q Consensus 360 ~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt-~~~~~~~----~R~yhs~a~llpdG~Vlv~GG~~ 420 (559)
+ + ++.+||..+. +-. ....... ....-....+.|||+.+++|+..
T Consensus 270 D-~------------~i~lwd~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d 319 (380)
T 3iz6_a 270 D-G------------TCRLFDMRTG---HQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN 319 (380)
T ss_dssp S-S------------CEEEEETTTT---EEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT
T ss_pred C-C------------eEEEEECCCC---cEEEEecccccccccccCceEEEEECCCCCEEEEEECC
Confidence 5 2 6789998876 322 1111100 00011245678999999999864
No 45
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.40 E-value=0.043 Score=53.86 Aligned_cols=223 Identities=14% Similarity=0.168 Sum_probs=119.1
Q ss_pred eecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccc-cccccceEEEccCCcEEEEcCCCCCceeEE-cCCCCCCC
Q 048136 127 GLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALK-DGRWYATQALLADGSFLIFGGRDSFSYEYI-PAERTENA 204 (559)
Q Consensus 127 ~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~-~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~ 204 (559)
.+.++|+.+++|+. + ..+++||.. +.+.... +. +...-.+++..+||+.++.|+.++ .+.+| ..+++
T Consensus 30 ~~s~~~~~l~s~~~-d--g~i~iw~~~-~~~~~~~---~~~h~~~v~~~~~~~~~~~l~s~~~d~-~i~vwd~~~~~--- 98 (312)
T 4ery_A 30 KFSPNGEWLASSSA-D--KLIKIWGAY-DGKFEKT---ISGHKLGISDVAWSSDSNLLVSASDDK-TLKIWDVSSGK--- 98 (312)
T ss_dssp EECTTSSEEEEEET-T--SCEEEEETT-TCCEEEE---ECCCSSCEEEEEECTTSSEEEEEETTS-EEEEEETTTCC---
T ss_pred EECCCCCEEEEeeC-C--CeEEEEeCC-Ccccchh---hccCCCceEEEEEcCCCCEEEEECCCC-EEEEEECCCCc---
Confidence 34568999999886 3 478899987 6655432 22 222233455667899999998764 56677 44321
Q ss_pred cceeccccccccccccCCccceEEEeeCCcEEEEec--CcEEEeeCCCCeEEEECCCCCCCCCcccCCCceeeccccccc
Q 048136 205 YSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN--NRSILLDPRANYVLREYPPLPGGARNYPSTSTSVLLPLKLYR 282 (559)
Q Consensus 205 w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg--~~~e~yDp~t~~W~~~~p~mp~~~~~~p~~g~~v~lpl~~~~ 282 (559)
....+ .... ..-..+...+++++++.|+ ..+.+||.++++-.+.++.- ..+ -.++.+ .
T Consensus 99 --~~~~~-~~~~-----~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-----~~~--v~~~~~--~--- 158 (312)
T 4ery_A 99 --CLKTL-KGHS-----NYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAH-----SDP--VSAVHF--N--- 158 (312)
T ss_dssp --EEEEE-ECCS-----SCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCC-----SSC--EEEEEE--C---
T ss_pred --EEEEE-cCCC-----CCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCC-----CCc--EEEEEE--c---
Confidence 11111 1110 0111223446888888886 45889999987655433210 000 011211 1
Q ss_pred ccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeee--cCCCCcccccEEEeeCCeEEEEcCcC
Q 048136 283 DYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTE--KMPTPRVMSDGVLLPTGDVLLINGAE 360 (559)
Q Consensus 283 ~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~--~M~~~R~~~~av~LpdG~V~vvGG~~ 360 (559)
.+++++++|+.+. .+..+|+.. .+-... .-....... ...-|+|+.+++|+.+
T Consensus 159 -----~~~~~l~~~~~d~-----------------~i~~wd~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~d 213 (312)
T 4ery_A 159 -----RDGSLIVSSSYDG-----------------LCRIWDTAS--GQCLKTLIDDDNPPVSF-VKFSPNGKYILAATLD 213 (312)
T ss_dssp -----TTSSEEEEEETTS-----------------CEEEEETTT--CCEEEEECCSSCCCEEE-EEECTTSSEEEEEETT
T ss_pred -----CCCCEEEEEeCCC-----------------cEEEEECCC--CceeeEEeccCCCceEE-EEECCCCCEEEEEcCC
Confidence 2677888887652 344555542 111111 111111222 3456899999888754
Q ss_pred CCCCCccCCCCCCcccEEEeCCCCCCCeEE-ecCCCCCCccceeeeEECCCCceEEeCCCCC
Q 048136 361 LGSAGWKDADKPCFKPLLYKPSKPPGSRFT-ELAPSDIPRMYHSVANLLPDGRVFVGGSNDN 421 (559)
Q Consensus 361 ~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt-~~~~~~~~R~yhs~a~llpdG~Vlv~GG~~~ 421 (559)
+ .+.+||..+. +-. ..................++++.+++|+.++
T Consensus 214 -~------------~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg 259 (312)
T 4ery_A 214 -N------------TLKLWDYSKG---KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDN 259 (312)
T ss_dssp -T------------EEEEEETTTT---EEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTS
T ss_pred -C------------eEEEEECCCC---cEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCC
Confidence 1 6789998776 422 2222111111112234457899999998653
No 46
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.39 E-value=0.0043 Score=62.73 Aligned_cols=138 Identities=10% Similarity=0.037 Sum_probs=72.4
Q ss_pred eEEEeCCCCCEEeCccCC--CcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCC-eecCCCccccccccceEEEcc
Q 048136 102 SVFYNVNTLQVTPLKVIT--DTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCD-WTEYPTALKDGRWYATQALLA 178 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~--~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~-W~~~~~~m~~~R~y~s~~~L~ 178 (559)
..+||..++.|..+.... ..........++|+.+++|+. + ..+++||.. +.+ |............-.+++..+
T Consensus 35 i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~-d--~~v~vwd~~-~~~~~~~~~~~~~~~~~v~~~~~~~ 110 (377)
T 3dwl_C 35 VELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQ-D--RNAYVYEKR-PDGTWKQTLVLLRLNRAATFVRWSP 110 (377)
T ss_dssp BCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEET-T--SSEEEC-------CCCCEEECCCCSSCEEEEECCT
T ss_pred EEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeC-C--CeEEEEEcC-CCCceeeeeEecccCCceEEEEECC
Confidence 467888888777766542 222233456678999999886 3 578999987 555 544321012223333445556
Q ss_pred CCcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEecC--cEEEeeCCCC
Q 048136 179 DGSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFANN--RSILLDPRAN 251 (559)
Q Consensus 179 dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg~--~~e~yDp~t~ 251 (559)
||+.+++|+.++ .+.+| ..... .|.....+..... ..-..+...++|++++.|+. .+.+||..+.
T Consensus 111 ~~~~l~~~~~d~-~i~iwd~~~~~--~~~~~~~~~~~h~-----~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 178 (377)
T 3dwl_C 111 NEDKFAVGSGAR-VISVCYFEQEN--DWWVSKHLKRPLR-----STILSLDWHPNNVLLAAGCADRKAYVLSAYVR 178 (377)
T ss_dssp TSSCCEEEESSS-CEEECCC-------CCCCEEECSSCC-----SCEEEEEECTTSSEEEEEESSSCEEEEEECCS
T ss_pred CCCEEEEEecCC-eEEEEEECCcc--cceeeeEeecccC-----CCeEEEEEcCCCCEEEEEeCCCEEEEEEEEec
Confidence 899999888764 45566 33321 1211111111010 01112334568998888864 5788997644
No 47
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=97.38 E-value=0.038 Score=56.70 Aligned_cols=110 Identities=15% Similarity=0.170 Sum_probs=65.3
Q ss_pred CeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccc-cccccceEEEccCCcEEEEcCCCCCceeEE-cCCCCCC
Q 048136 126 GGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALK-DGRWYATQALLADGSFLIFGGRDSFSYEYI-PAERTEN 203 (559)
Q Consensus 126 ~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~-~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~ 203 (559)
..+-+||+.+++|+. + ..+++||.. +.+-... +. +...-.+++..++|+.++.|+.+. ++.+| ..+++
T Consensus 129 v~~s~dg~~l~s~~~-d--~~i~iwd~~-~~~~~~~---~~~h~~~v~~~~~~p~~~~l~s~s~d~-~v~iwd~~~~~-- 198 (393)
T 1erj_A 129 VCFSPDGKFLATGAE-D--RLIRIWDIE-NRKIVMI---LQGHEQDIYSLDYFPSGDKLVSGSGDR-TVRIWDLRTGQ-- 198 (393)
T ss_dssp EEECTTSSEEEEEET-T--SCEEEEETT-TTEEEEE---ECCCSSCEEEEEECTTSSEEEEEETTS-EEEEEETTTTE--
T ss_pred EEECCCCCEEEEEcC-C--CeEEEEECC-CCcEEEE---EccCCCCEEEEEEcCCCCEEEEecCCC-cEEEEECCCCe--
Confidence 345679999999986 3 589999987 5543221 22 222233455667899888888763 56677 44321
Q ss_pred CcceeccccccccccccCCccceEEEee-CCcEEEEec--CcEEEeeCCCCeEEE
Q 048136 204 AYSIPFQFLRDTYDVLENNLYPFVYLVP-DGNLYIFAN--NRSILLDPRANYVLR 255 (559)
Q Consensus 204 ~w~~~~p~l~~~~d~~~~~~yp~~~~l~-~G~iyv~Gg--~~~e~yDp~t~~W~~ 255 (559)
....... . ..-..+...+ +|++++.|+ ..+.+||..++....
T Consensus 199 -~~~~~~~--~-------~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~ 243 (393)
T 1erj_A 199 -CSLTLSI--E-------DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVE 243 (393)
T ss_dssp -EEEEEEC--S-------SCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEE
T ss_pred -eEEEEEc--C-------CCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEE
Confidence 1111110 0 0111223345 889998886 458899998876543
No 48
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.37 E-value=0.063 Score=53.52 Aligned_cols=135 Identities=12% Similarity=0.100 Sum_probs=78.7
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccc-cccccceEEEccCC
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALK-DGRWYATQALLADG 180 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~-~~R~y~s~~~L~dG 180 (559)
..+||..+++....-..+........+.+||+.+++|+.. ..+.+||.. +.+-.. . +. ....-.+++.-+||
T Consensus 104 i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~d---g~v~i~~~~-~~~~~~--~-~~~~~~~v~~~~~spdg 176 (321)
T 3ow8_A 104 IRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHV---GKVNIFGVE-SGKKEY--S-LDTRGKFILSIAYSPDG 176 (321)
T ss_dssp EEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTT---SEEEEEETT-TCSEEE--E-EECSSSCEEEEEECTTS
T ss_pred EEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCC---CcEEEEEcC-CCceeE--E-ecCCCceEEEEEECCCC
Confidence 6789988775433221222222234566899999999863 578999987 443221 1 21 22233455667799
Q ss_pred cEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEecC--cEEEeeCCCCeEEE
Q 048136 181 SFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFANN--RSILLDPRANYVLR 255 (559)
Q Consensus 181 ~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg~--~~e~yDp~t~~W~~ 255 (559)
+.++.|+.++ .+.+| ..++ .....+ .... ..-..+...++|++++.|+. .+.+||..+.....
T Consensus 177 ~~lasg~~dg-~i~iwd~~~~-----~~~~~~-~~h~-----~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~ 242 (321)
T 3ow8_A 177 KYLASGAIDG-IINIFDIATG-----KLLHTL-EGHA-----MPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAG 242 (321)
T ss_dssp SEEEEEETTS-CEEEEETTTT-----EEEEEE-CCCS-----SCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEE
T ss_pred CEEEEEcCCC-eEEEEECCCC-----cEEEEE-cccC-----CceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeE
Confidence 9999998764 56777 4432 111111 1110 01112344579999998874 58899998876553
No 49
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=97.36 E-value=0.0099 Score=59.98 Aligned_cols=139 Identities=16% Similarity=0.056 Sum_probs=79.9
Q ss_pred eEEEeCCCCCEEeCc---cCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCcccc-ccccceEEEc
Q 048136 102 SVFYNVNTLQVTPLK---VITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKD-GRWYATQALL 177 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~---~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~-~R~y~s~~~L 177 (559)
..+||..+++|.... ..+.........-+||+.+++|+.. ..+.+||.. +.++..+.. +.. ...-.+++..
T Consensus 40 i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D---~~v~iw~~~-~~~~~~~~~-~~~h~~~v~~v~~s 114 (345)
T 3fm0_A 40 IRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFD---ATTCIWKKN-QDDFECVTT-LEGHENEVKSVAWA 114 (345)
T ss_dssp EEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETT---SCEEEEEEC-CC-EEEEEE-ECCCSSCEEEEEEC
T ss_pred EEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECC---CcEEEEEcc-CCCeEEEEE-ccCCCCCceEEEEe
Confidence 678888888765322 1233223334556799999999873 478888877 665543322 322 2223345566
Q ss_pred cCCcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEec--CcEEEeeCCCCeEE
Q 048136 178 ADGSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN--NRSILLDPRANYVL 254 (559)
Q Consensus 178 ~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg--~~~e~yDp~t~~W~ 254 (559)
++|+.++.|+.+. ++.+| ..... .... ...+.... ..-..+...++|++++.|+ ..+.+||..++.|.
T Consensus 115 p~~~~l~s~s~D~-~v~iwd~~~~~--~~~~-~~~~~~h~-----~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~ 185 (345)
T 3fm0_A 115 PSGNLLATCSRDK-SVWVWEVDEED--EYEC-VSVLNSHT-----QDVKHVVWHPSQELLASASYDDTVKLYREEEDDWV 185 (345)
T ss_dssp TTSSEEEEEETTS-CEEEEEECTTS--CEEE-EEEECCCC-----SCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEE
T ss_pred CCCCEEEEEECCC-eEEEEECCCCC--CeEE-EEEecCcC-----CCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEE
Confidence 7999999998764 46666 33321 1111 11111110 0111233456898888886 45889999888775
No 50
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.34 E-value=0.033 Score=54.57 Aligned_cols=223 Identities=16% Similarity=0.141 Sum_probs=118.7
Q ss_pred CeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCcc---ccccccceEEEccCCcEEEEcCCCCCceeEE-cCCCC
Q 048136 126 GGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTAL---KDGRWYATQALLADGSFLIFGGRDSFSYEYI-PAERT 201 (559)
Q Consensus 126 ~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m---~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~ 201 (559)
....++|+++++|+ + ..+++||.. +.+....-..+ .....-.+++..+||+.+++|+.++ .+.+| ...++
T Consensus 57 ~~~~~~~~~l~~~~--d--g~i~iw~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~i~~~d~~~~~ 130 (337)
T 1gxr_A 57 VTISNPTRHVYTGG--K--GCVKVWDIS-HPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEAS-TLSIWDLAAPT 130 (337)
T ss_dssp EEECSSSSEEEEEC--B--SEEEEEETT-STTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSS-EEEEEECCCC-
T ss_pred EEEecCCcEEEEcC--C--CeEEEEECC-CCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCC-cEEEEECCCCC
Confidence 34557899999987 2 589999987 44322111101 1223334556677899998888654 46677 44321
Q ss_pred CCCcceeccccccccccccCCccceEEEeeCCcEEEEec--CcEEEeeCCCCeEEEECCCCCCCCCcccCCCceeecccc
Q 048136 202 ENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN--NRSILLDPRANYVLREYPPLPGGARNYPSTSTSVLLPLK 279 (559)
Q Consensus 202 ~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg--~~~e~yDp~t~~W~~~~p~mp~~~~~~p~~g~~v~lpl~ 279 (559)
......+ .... ..-..+...++|++++.|+ ..+.+||..+++....+... .. + -.++.+ .
T Consensus 131 ---~~~~~~~-~~~~-----~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~----~~-~--i~~~~~--~ 192 (337)
T 1gxr_A 131 ---PRIKAEL-TSSA-----PACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGH----TD-G--ASCIDI--S 192 (337)
T ss_dssp ----EEEEEE-ECSS-----SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCC----SS-C--EEEEEE--C
T ss_pred ---cceeeec-ccCC-----CceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecc----cC-c--eEEEEE--C
Confidence 1111111 1100 0111233456888888876 46889999988765444211 00 0 111111 1
Q ss_pred cccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeee-cCCCCcccccEEEeeCCeEEEEcC
Q 048136 280 LYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTE-KMPTPRVMSDGVLLPTGDVLLING 358 (559)
Q Consensus 280 ~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~av~LpdG~V~vvGG 358 (559)
.+++.+++|+.+. .+..+|+.. .+-... .... .-.+....|+|+.+++|+
T Consensus 193 --------~~~~~l~~~~~dg-----------------~i~~~d~~~--~~~~~~~~~~~--~v~~~~~s~~~~~l~~~~ 243 (337)
T 1gxr_A 193 --------NDGTKLWTGGLDN-----------------TVRSWDLRE--GRQLQQHDFTS--QIFSLGYCPTGEWLAVGM 243 (337)
T ss_dssp --------TTSSEEEEEETTS-----------------EEEEEETTT--TEEEEEEECSS--CEEEEEECTTSSEEEEEE
T ss_pred --------CCCCEEEEEecCC-----------------cEEEEECCC--CceEeeecCCC--ceEEEEECCCCCEEEEEc
Confidence 2567777776541 234555543 111111 2111 112234558999999887
Q ss_pred cCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCccceeeeEECCCCceEEeCCCC
Q 048136 359 AELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANLLPDGRVFVGGSND 420 (559)
Q Consensus 359 ~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~llpdG~Vlv~GG~~ 420 (559)
.+ + .+.+||..+. +-..+.... .. -......|||+.+++|+..
T Consensus 244 ~~-~------------~i~~~~~~~~---~~~~~~~~~-~~--v~~~~~~~~~~~l~~~~~d 286 (337)
T 1gxr_A 244 ES-S------------NVEVLHVNKP---DKYQLHLHE-SC--VLSLKFAYCGKWFVSTGKD 286 (337)
T ss_dssp TT-S------------CEEEEETTSS---CEEEECCCS-SC--EEEEEECTTSSEEEEEETT
T ss_pred CC-C------------cEEEEECCCC---CeEEEcCCc-cc--eeEEEECCCCCEEEEecCC
Confidence 54 1 5789998876 332222111 11 2235578999999998863
No 51
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.29 E-value=0.14 Score=49.25 Aligned_cols=240 Identities=15% Similarity=0.084 Sum_probs=119.0
Q ss_pred eEEEeCCCCCEEeCccCCC-cccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccc-cccccceEEEccC
Q 048136 102 SVFYNVNTLQVTPLKVITD-TWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALK-DGRWYATQALLAD 179 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~-~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~-~~R~y~s~~~L~d 179 (559)
...||+. ++++.+..... ....+-+...+|++|+.... ...+.+||+. .++.... +. ....-.+.+.-++
T Consensus 43 v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~v~~~d~~--g~~~~~~--~~~~~~~~~~i~~~~~ 114 (300)
T 2qc5_A 43 ISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENG---ANKIGKLSKK--GGFTEYP--LPQPDSGPYGITEGLN 114 (300)
T ss_dssp EEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETT---TTEEEEECTT--SCEEEEE--CSSTTCCEEEEEECST
T ss_pred EEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecC---CCeEEEECCC--CCeEEec--CCCCCCCCccceECCC
Confidence 5678887 67665432211 12223344578999997542 2578899986 4444331 11 1122334555568
Q ss_pred CcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceE-EEeeCCcEEEEe--cCcEEEeeCCCCeEEE
Q 048136 180 GSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFV-YLVPDGNLYIFA--NNRSILLDPRANYVLR 255 (559)
Q Consensus 180 G~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~-~~l~~G~iyv~G--g~~~e~yDp~t~~W~~ 255 (559)
|++|+..... ..+..| +. ++ ... ..+... ...|.. ...++|+||+.. +..+.+||+ +++...
T Consensus 115 g~l~v~~~~~-~~i~~~~~~-g~---~~~-~~~~~~-------~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~ 180 (300)
T 2qc5_A 115 GDIWFTQLNG-DRIGKLTAD-GT---IYE-YDLPNK-------GSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEE 180 (300)
T ss_dssp TCEEEEETTT-TEEEEECTT-SC---EEE-EECSST-------TCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE
T ss_pred CCEEEEccCC-CeEEEECCC-CC---EEE-ccCCCC-------CCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEE
Confidence 9999876432 234445 44 31 111 111100 123333 334689999876 456889999 565552
Q ss_pred ECCCCCCCCCcccCCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeeec
Q 048136 256 EYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTEK 335 (559)
Q Consensus 256 ~~p~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~ 335 (559)
+. ++. ....| .++.+. .+++||++.... ..+.+||+. .++....
T Consensus 181 -~~-~~~-~~~~~---~~i~~d----------~~g~l~v~~~~~-----------------~~i~~~~~~---g~~~~~~ 224 (300)
T 2qc5_A 181 -YP-LPT-NAAAP---VGITSG----------NDGALWFVEIMG-----------------NKIGRITTT---GEISEYD 224 (300)
T ss_dssp -EE-CSS-TTCCE---EEEEEC----------TTSSEEEEETTT-----------------TEEEEECTT---CCEEEEE
T ss_pred -ee-CCC-CCCCc---ceEEEC----------CCCCEEEEccCC-----------------CEEEEEcCC---CcEEEEE
Confidence 31 221 11122 122221 267888875322 123455542 2333322
Q ss_pred CCCCccc-ccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecC-CCCCCccceeeeEECCCCce
Q 048136 336 MPTPRVM-SDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELA-PSDIPRMYHSVANLLPDGRV 413 (559)
Q Consensus 336 M~~~R~~-~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~-~~~~~R~yhs~a~llpdG~V 413 (559)
++..-.. .+.+.-++|+|||..-.. ..+.+||+ +. ++.... +....+ -+ ..++.+||++
T Consensus 225 ~~~~~~~~~~i~~d~~g~l~v~~~~~-------------~~i~~~~~-~g---~~~~~~~~~~~~~-~~-~i~~~~~g~l 285 (300)
T 2qc5_A 225 IPTPNARPHAITAGKNSEIWFTEWGA-------------NQIGRITN-DN---TIQEYQLQTENAE-PH-GITFGKDGSV 285 (300)
T ss_dssp CSSTTCCEEEEEECSTTCEEEEETTT-------------TEEEEECT-TS---CEEEEECCSTTCC-CC-CEEECTTSCE
T ss_pred CCCCCCCceEEEECCCCCEEEeccCC-------------CeEEEECC-CC---cEEEEECCccCCc-cc-eeEeCCCCCE
Confidence 2211111 123344689999875321 15778998 34 444321 111111 12 3456789999
Q ss_pred EEeCC
Q 048136 414 FVGGS 418 (559)
Q Consensus 414 lv~GG 418 (559)
|++..
T Consensus 286 ~v~~~ 290 (300)
T 2qc5_A 286 WFALK 290 (300)
T ss_dssp EEECS
T ss_pred EEEcc
Confidence 99864
No 52
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.29 E-value=0.012 Score=58.92 Aligned_cols=260 Identities=15% Similarity=0.108 Sum_probs=124.7
Q ss_pred eEEEeCCCCCEEeCccC----CCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCC-----CeecCCCccc-ccccc
Q 048136 102 SVFYNVNTLQVTPLKVI----TDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTC-----DWTEYPTALK-DGRWY 171 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~----~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~-----~W~~~~~~m~-~~R~y 171 (559)
..+||..++.++.+... +.........-++|+++++|+. + ..+++||.. .. ++..+.. +. +...-
T Consensus 36 i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~-D--~~v~iw~~~-~~~~~~~~~~~~~~-~~~h~~~V 110 (330)
T 2hes_X 36 IKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSF-D--STVSIWAKE-ESADRTFEMDLLAI-IEGHENEV 110 (330)
T ss_dssp EEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEET-T--SCEEEEEC--------CCCEEEEE-EC----CE
T ss_pred EEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeC-C--CcEEEEEcc-cCcCccccceeEEE-EcCCCCcE
Confidence 67889887655443222 2222223345679999999987 3 578899874 22 2222211 21 12222
Q ss_pred ceEEEccCCcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEec--CcEEEeeC
Q 048136 172 ATQALLADGSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN--NRSILLDP 248 (559)
Q Consensus 172 ~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg--~~~e~yDp 248 (559)
.+++.-+||+.++.|+.+. ++.+| ..... ..+..... +....+ .--.+...++|++++.|+ ..+.+||.
T Consensus 111 ~~v~~sp~g~~las~s~D~-~v~iwd~~~~~-~~~~~~~~-~~~h~~-----~v~~v~~~p~~~~l~s~s~D~~i~iW~~ 182 (330)
T 2hes_X 111 KGVAWSNDGYYLATCSRDK-SVWIWETDESG-EEYECISV-LQEHSQ-----DVKHVIWHPSEALLASSSYDDTVRIWKD 182 (330)
T ss_dssp EEEEECTTSCEEEEEETTS-CEEEEECCTTC-CCCEEEEE-ECCCSS-----CEEEEEECSSSSEEEEEETTSCEEEEEE
T ss_pred EEEEECCCCCEEEEEeCCC-EEEEEeccCCC-CCeEEEEE-eccCCC-----ceEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 3455567899999888764 56677 32210 01211111 111100 011122346899888886 45788998
Q ss_pred CCCeEEEECCCCCCCCCcccCCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCC-
Q 048136 249 RANYVLREYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSP- 327 (559)
Q Consensus 249 ~t~~W~~~~p~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~- 327 (559)
.++.|. .+..+.+. .+....+...+ + .++..++.|+.+. ++..+|+...
T Consensus 183 ~~~~~~-~~~~~~~h------~~~v~~~~~~~----~--~~~~~l~s~s~D~-----------------~v~iw~~~~~~ 232 (330)
T 2hes_X 183 YDDDWE-CVAVLNGH------EGTVWSSDFDK----T--EGVFRLCSGSDDS-----------------TVRVWKYMGDD 232 (330)
T ss_dssp ETTEEE-EEEEECCC------SSCEEEEEECC----S--SSSCEEEEEETTS-----------------CEEEEEEEEEC
T ss_pred CCCCee-EEEEccCC------CCcEEEEEecC----C--CCeeEEEEEeCCC-----------------eEEEEEecCCC
Confidence 877664 22222211 11111111111 0 1256777777652 2334444321
Q ss_pred ---CCceeee-cCCC-CcccccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCcc--
Q 048136 328 ---DPVWTTE-KMPT-PRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRM-- 400 (559)
Q Consensus 328 ---~~~W~~~-~M~~-~R~~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~-- 400 (559)
...|... .++. .......+...++..++.||.+ | .+.+||..+. +|+..........
T Consensus 233 ~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~d-g------------~v~iw~~~~~---~~~~~~~~~~~h~~~ 296 (330)
T 2hes_X 233 EDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGAD-G------------VLAVYEEVDG---EWKVFAKRALCHGVY 296 (330)
T ss_dssp TTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETT-S------------CEEEEEEETT---EEEEEEEESCTTTTS
T ss_pred ccccceeEEeeecccccccceEEEEEcCCCEEEEEeCC-C------------EEEEEEcCCC---ceEEEeccccccccc
Confidence 1234443 3322 1111222333345566666654 1 6789998877 7864322111111
Q ss_pred ceeeeEECC--CCceEEeCCCC
Q 048136 401 YHSVANLLP--DGRVFVGGSND 420 (559)
Q Consensus 401 yhs~a~llp--dG~Vlv~GG~~ 420 (559)
.-......| ||++++.||.+
T Consensus 297 ~v~~v~~~~~~~~~~las~s~D 318 (330)
T 2hes_X 297 EINVVKWLELNGKTILATGGDD 318 (330)
T ss_dssp CEEEEEEC-----CCEEEEETT
T ss_pred eEEEEEEecCCCceEEEEecCC
Confidence 111234556 79999999864
No 53
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.29 E-value=0.1 Score=49.67 Aligned_cols=217 Identities=15% Similarity=0.116 Sum_probs=105.8
Q ss_pred eecCCCcEEE-EcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCcEEEEcCCCCCceeEE-cCCCCCCC
Q 048136 127 GLDVNGNLIS-TGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGSFLIFGGRDSFSYEYI-PAERTENA 204 (559)
Q Consensus 127 ~~l~dG~i~v-~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~ 204 (559)
++..+|++|+ .... ...+.+||+. +........ .....-.+.+.-++|++||... ...+-+| +....
T Consensus 30 ~~~~~g~l~v~~~~~---~~~i~~~~~~-~~~~~~~~~--~~~~~p~~i~~~~~g~l~v~~~--~~~i~~~d~~~~~--- 98 (270)
T 1rwi_B 30 AVDSAGNVYVTSEGM---YGRVVKLATG-STGTTVLPF--NGLYQPQGLAVDGAGTVYVTDF--NNRVVTLAAGSNN--- 98 (270)
T ss_dssp EECTTCCEEEEECSS---SCEEEEECC------EECCC--CSCCSCCCEEECTTCCEEEEET--TTEEEEECTTCSC---
T ss_pred EECCCCCEEEEccCC---CCcEEEecCC-CcccceEee--CCcCCcceeEECCCCCEEEEcC--CCEEEEEeCCCce---
Confidence 4457899998 5332 2578889987 554433321 1111223466667899999876 2345556 54321
Q ss_pred cceeccccccccccccCCccce-EEEeeCCcEEEEe--cCcEEEeeCCCCeEEEECCCCCCCCCcccCCCceeecccccc
Q 048136 205 YSIPFQFLRDTYDVLENNLYPF-VYLVPDGNLYIFA--NNRSILLDPRANYVLREYPPLPGGARNYPSTSTSVLLPLKLY 281 (559)
Q Consensus 205 w~~~~p~l~~~~d~~~~~~yp~-~~~l~~G~iyv~G--g~~~e~yDp~t~~W~~~~p~mp~~~~~~p~~g~~v~lpl~~~ 281 (559)
....... . ...|. ..+.++|+||+.. +..+.+||..+..... ... . ....| .++.+.
T Consensus 99 -~~~~~~~-~-------~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~-~~~-~--~~~~p---~~i~~~---- 158 (270)
T 1rwi_B 99 -QTVLPFD-G-------LNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTV-LPF-T--GLNDP---DGVAVD---- 158 (270)
T ss_dssp -CEECCCC-S-------CSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEE-CCC-C--SCCSC---CCEEEC----
T ss_pred -EeeeecC-C-------cCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEe-ecc-c--cCCCc---eeEEEe----
Confidence 1111110 0 01233 3344589999875 3567888877665432 211 1 11122 122221
Q ss_pred cccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceee-e-cCCCCcccccEEEeeCCeEEEEcCc
Q 048136 282 RDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTT-E-KMPTPRVMSDGVLLPTGDVLLINGA 359 (559)
Q Consensus 282 ~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~-~-~M~~~R~~~~av~LpdG~V~vvGG~ 359 (559)
.+++||+..... ..+.+||+... ..... . .+..+ .+.++-++|+|||....
T Consensus 159 ------~~g~l~v~~~~~-----------------~~i~~~~~~~~-~~~~~~~~~~~~p---~~i~~d~~g~l~v~~~~ 211 (270)
T 1rwi_B 159 ------NSGNVYVTDTDN-----------------NRVVKLEAESN-NQVVLPFTDITAP---WGIAVDEAGTVYVTEHN 211 (270)
T ss_dssp ------TTCCEEEEEGGG-----------------TEEEEECTTTC-CEEECCCSSCCSE---EEEEECTTCCEEEEETT
T ss_pred ------CCCCEEEEECCC-----------------CEEEEEecCCC-ceEeecccCCCCc---eEEEECCCCCEEEEECC
Confidence 267888875321 23445554321 11111 1 22111 12334468899997643
Q ss_pred CCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCccceeeeEECCCCceEEeCCC
Q 048136 360 ELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANLLPDGRVFVGGSN 419 (559)
Q Consensus 360 ~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~llpdG~Vlv~GG~ 419 (559)
. ..+.+||+.+. .-........ . ......+.+||++||+...
T Consensus 212 ~-------------~~v~~~~~~~~---~~~~~~~~~~-~-~p~~i~~~~~g~l~v~~~~ 253 (270)
T 1rwi_B 212 T-------------NQVVKLLAGST---TSTVLPFTGL-N-TPLAVAVDSDRTVYVADRG 253 (270)
T ss_dssp T-------------SCEEEECTTCS---CCEECCCCSC-S-CEEEEEECTTCCEEEEEGG
T ss_pred C-------------CcEEEEcCCCC---cceeeccCCC-C-CceeEEECCCCCEEEEECC
Confidence 2 15788999765 3222211111 1 1223456789999998653
No 54
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.28 E-value=0.019 Score=58.70 Aligned_cols=262 Identities=10% Similarity=-0.001 Sum_probs=128.2
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCc
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGS 181 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~ 181 (559)
..+||..+.+.......+ ........-++|+++++|+.. ..+++||.. +.+-...-. .+...-.+++..++|+
T Consensus 80 v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d---g~i~iwd~~-~~~~~~~~~--~h~~~v~~~~~~~~~~ 152 (420)
T 3vl1_A 80 DFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTE---GDIKVLDSN-FNLQREIDQ--AHVSEITKLKFFPSGE 152 (420)
T ss_dssp EEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETT---SCEEEECTT-SCEEEEETT--SSSSCEEEEEECTTSS
T ss_pred EEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECC---CCEEEEeCC-Ccceeeecc--cccCccEEEEECCCCC
Confidence 677887654332211111 122222345799999999863 578999987 544322210 1223334556667899
Q ss_pred EEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEec--CcEEEeeCCCCeEEEECC
Q 048136 182 FLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN--NRSILLDPRANYVLREYP 258 (559)
Q Consensus 182 VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg--~~~e~yDp~t~~W~~~~p 258 (559)
.++.|+.++ .+.+| ..+.+ - ...+ .... ..-..+...++|+.++.|+ ..+.+||..+++-...+.
T Consensus 153 ~l~s~s~d~-~i~iwd~~~~~---~--~~~~-~~h~-----~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~ 220 (420)
T 3vl1_A 153 ALISSSQDM-QLKIWSVKDGS---N--PRTL-IGHR-----ATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFN 220 (420)
T ss_dssp EEEEEETTS-EEEEEETTTCC---C--CEEE-ECCS-----SCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred EEEEEeCCC-eEEEEeCCCCc---C--ceEE-cCCC-----CcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEee
Confidence 988888764 56677 43321 1 1111 1110 0111233456899888876 358899999887554332
Q ss_pred CCCCCCCcccCCCceeeccccc--------cc--ccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCC
Q 048136 259 PLPGGARNYPSTSTSVLLPLKL--------YR--DYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPD 328 (559)
Q Consensus 259 ~mp~~~~~~p~~g~~v~lpl~~--------~~--~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~ 328 (559)
.... .. .+. ......+-.. .. .-....+++.+++|+.+ ..+..||+....
T Consensus 221 ~~~~-~~-~~v-~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----------------g~i~i~d~~~~~ 280 (420)
T 3vl1_A 221 RKEN-PH-DGV-NSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVS-----------------GVITVHNVFSKE 280 (420)
T ss_dssp BTTB-TT-CCE-EEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETT-----------------SCEEEEETTTCC
T ss_pred cCCC-CC-CCc-cEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCC-----------------CeEEEEECCCCc
Confidence 1100 00 000 0000000000 00 00001267888888764 234566665311
Q ss_pred CceeeecCCCCcccccEEEeeCCe-EEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCccceeeeEE
Q 048136 329 PVWTTEKMPTPRVMSDGVLLPTGD-VLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANL 407 (559)
Q Consensus 329 ~~W~~~~M~~~R~~~~av~LpdG~-V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~l 407 (559)
.......-....... ....|+|+ ++++|+.+ | .+.+||..+..- ....+... ....-.++.
T Consensus 281 ~~~~~~~~~~~~v~~-~~~~~~~~~~l~~g~~d-g------------~i~vwd~~~~~~-~~~~~~~~---~~~~v~~~~ 342 (420)
T 3vl1_A 281 QTIQLPSKFTCSCNS-LTVDGNNANYIYAGYEN-G------------MLAQWDLRSPEC-PVGEFLIN---EGTPINNVY 342 (420)
T ss_dssp EEEEECCTTSSCEEE-EEECSSCTTEEEEEETT-S------------EEEEEETTCTTS-CSEEEEES---TTSCEEEEE
T ss_pred eeEEcccccCCCcee-EEEeCCCCCEEEEEeCC-C------------eEEEEEcCCCcC-chhhhhcc---CCCCceEEE
Confidence 111111111112222 45568888 88888754 2 678999887511 01111110 011123445
Q ss_pred CCCCceEEeCCCC
Q 048136 408 LPDGRVFVGGSND 420 (559)
Q Consensus 408 lpdG~Vlv~GG~~ 420 (559)
.+||+.+++|+.+
T Consensus 343 ~~~~~~l~s~~~d 355 (420)
T 3vl1_A 343 FAAGALFVSSGFD 355 (420)
T ss_dssp EETTEEEEEETTT
T ss_pred eCCCCEEEEecCC
Confidence 6799999998853
No 55
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.25 E-value=0.11 Score=53.88 Aligned_cols=242 Identities=12% Similarity=0.047 Sum_probs=123.0
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCc
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGS 181 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~ 181 (559)
..+||..+++....-..+... -..+..++..+++|+. + ..+.+||.. +.+-... +............ +|+
T Consensus 181 i~vwd~~~~~~~~~~~~h~~~--v~~~~~~~~~l~s~s~-d--g~i~~wd~~-~~~~~~~---~~~~~~~v~~~~~-~~~ 250 (445)
T 2ovr_B 181 LKVWNAETGECIHTLYGHTST--VRCMHLHEKRVVSGSR-D--ATLRVWDIE-TGQCLHV---LMGHVAAVRCVQY-DGR 250 (445)
T ss_dssp EEEEETTTTEEEEEECCCSSC--EEEEEEETTEEEEEET-T--SEEEEEESS-SCCEEEE---EECCSSCEEEEEE-CSS
T ss_pred EEEEECCcCcEEEEECCCCCc--EEEEEecCCEEEEEeC-C--CEEEEEECC-CCcEEEE---EcCCcccEEEEEE-CCC
Confidence 678888776543221112111 1122336778888876 2 589999987 5442211 2222222223334 788
Q ss_pred EEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEec--CcEEEeeCCCCeEEEECC
Q 048136 182 FLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN--NRSILLDPRANYVLREYP 258 (559)
Q Consensus 182 VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg--~~~e~yDp~t~~W~~~~p 258 (559)
.+++|+.++ .+.+| ..+. .....+ ... ..+...+..+|+.++.|+ ..+.+||..+++-...+.
T Consensus 251 ~l~~~~~dg-~i~iwd~~~~-----~~~~~~-~~~-------~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 316 (445)
T 2ovr_B 251 RVVSGAYDF-MVKVWDPETE-----TCLHTL-QGH-------TNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLT 316 (445)
T ss_dssp CEEEEETTS-CEEEEEGGGT-----EEEEEE-CCC-------SSCEEEEEECSSEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred EEEEEcCCC-EEEEEECCCC-----cEeEEe-cCC-------CCceEEEEECCCEEEEEeCCCeEEEEECCCCCEEEEEc
Confidence 888888764 46666 4332 111111 110 112223444888888876 468899998876553332
Q ss_pred CCCCCCCcccCCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeeecCCC
Q 048136 259 PLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTEKMPT 338 (559)
Q Consensus 259 ~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~ 338 (559)
. ... ....+. .+++.+++|+.+ ..+..+|+.......+. ..+.
T Consensus 317 ~----~~~----~v~~~~-----------~~~~~l~~~~~d-----------------g~i~vwd~~~~~~~~~~-~~~~ 359 (445)
T 2ovr_B 317 G----HQS----LTSGME-----------LKDNILVSGNAD-----------------STVKIWDIKTGQCLQTL-QGPN 359 (445)
T ss_dssp C----CCS----CEEEEE-----------EETTEEEEEETT-----------------SCEEEEETTTCCEEEEE-CSTT
T ss_pred C----Ccc----cEEEEE-----------EeCCEEEEEeCC-----------------CeEEEEECCCCcEEEEE-ccCC
Confidence 1 010 111111 245677787754 23445665431111111 1111
Q ss_pred -CcccccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEE-ecCCCC--CCccceeeeEECCCCceE
Q 048136 339 -PRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFT-ELAPSD--IPRMYHSVANLLPDGRVF 414 (559)
Q Consensus 339 -~R~~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt-~~~~~~--~~R~yhs~a~llpdG~Vl 414 (559)
......+ +..+++.+++|+.+ | .+.+||..+. +.. .+.... .....-.....-|||+++
T Consensus 360 ~~~~~v~~-~~~~~~~l~s~~~d-g------------~v~iwd~~~~---~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 422 (445)
T 2ovr_B 360 KHQSAVTC-LQFNKNFVITSSDD-G------------TVKLWDLKTG---EFIRNLVTLESGGSGGVVWRIRASNTKLVC 422 (445)
T ss_dssp SCSSCEEE-EEECSSEEEEEETT-S------------EEEEEETTTC---CEEEEEEECTTGGGTCEEEEEEECSSEEEE
T ss_pred CCCCCEEE-EEECCCEEEEEeCC-C------------eEEEEECCCC---ceeeeeeccccCCCCceEEEEEecCCEEEE
Confidence 1122222 33488999988764 2 6899999877 432 221110 011111123467999999
Q ss_pred EeCCCCC
Q 048136 415 VGGSNDN 421 (559)
Q Consensus 415 v~GG~~~ 421 (559)
++|+.+.
T Consensus 423 a~~~~dg 429 (445)
T 2ovr_B 423 AVGSRNG 429 (445)
T ss_dssp EEECSSS
T ss_pred EEcccCC
Confidence 9998754
No 56
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.25 E-value=0.094 Score=53.44 Aligned_cols=255 Identities=18% Similarity=0.221 Sum_probs=122.6
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeec----CCCcccccccc-ceEEE
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTE----YPTALKDGRWY-ATQAL 176 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~----~~~~m~~~R~y-~s~~~ 176 (559)
..+||..+.+-...-..+.......++.+||+.+++||.. ..+.+||.. +..-.. ....+.....+ .++..
T Consensus 90 v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d---~~v~iw~~~-~~~~~~~~~~~~~~~~gh~~~v~~~~~ 165 (380)
T 3iz6_a 90 LIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLD---SACSIFNLS-SQADRDGNMPVSRVLTGHKGYASSCQY 165 (380)
T ss_dssp EEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSS---SCCEEEECC-CCSSCCCSSTTCCBCCCCSSCCCCCBC
T ss_pred EEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCC---CcEEEEECC-CCccccCCccceeeccCCCcceEEEEE
Confidence 6789988776543323333333345667899999999973 467788865 322111 00001111111 12222
Q ss_pred ccC-CcEEEEcCCCCCceeEE-cCCCCCCCcceec--cccccccccccCCccceEEE-eeCCcEEEEec--CcEEEeeCC
Q 048136 177 LAD-GSFLIFGGRDSFSYEYI-PAERTENAYSIPF--QFLRDTYDVLENNLYPFVYL-VPDGNLYIFAN--NRSILLDPR 249 (559)
Q Consensus 177 L~d-G~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~--p~l~~~~d~~~~~~yp~~~~-l~~G~iyv~Gg--~~~e~yDp~ 249 (559)
.++ +..++.|+.+ .++.+| ..++. ..... .+...... ... .+.. -.++++++.|+ ..+.+||.+
T Consensus 166 ~~~~~~~l~s~s~D-~~i~~wd~~~~~---~~~~~~~~~~~~h~~----~v~-~~~~~~~~~~~l~sgs~D~~v~~wd~~ 236 (380)
T 3iz6_a 166 VPDQETRLITGSGD-QTCVLWDVTTGQ---RISIFGSEFPSGHTA----DVL-SLSINSLNANMFISGSCDTTVRLWDLR 236 (380)
T ss_dssp CSSSSSCEEEECTT-SCEEEECTTTCC---EEEEECCCSSSSCCS----CEE-EEEECSSSCCEEEEEETTSCEEEEETT
T ss_pred ecCCCCEEEEECCC-CcEEEEEcCCCc---EEEEeecccCCCCcc----CeE-EEEeecCCCCEEEEEECCCeEEEEECC
Confidence 333 4456666655 356677 44331 11111 00010000 000 1111 13788998886 468899986
Q ss_pred CC-eEEEECCCCCCCCCcccCCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCC
Q 048136 250 AN-YVLREYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPD 328 (559)
Q Consensus 250 t~-~W~~~~p~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~ 328 (559)
.. .-.+.+ .+ ... + =.++.+ . .+++.++.|+.+. ++..+|+....
T Consensus 237 ~~~~~~~~~---~~-h~~-~--v~~v~~--~--------p~~~~l~s~s~D~-----------------~i~lwd~~~~~ 282 (380)
T 3iz6_a 237 ITSRAVRTY---HG-HEG-D--INSVKF--F--------PDGQRFGTGSDDG-----------------TCRLFDMRTGH 282 (380)
T ss_dssp TTCCCCEEE---CC-CSS-C--CCEEEE--C--------TTSSEEEEECSSS-----------------CEEEEETTTTE
T ss_pred CCCcceEEE---CC-cCC-C--eEEEEE--e--------cCCCeEEEEcCCC-----------------eEEEEECCCCc
Confidence 43 211111 11 000 0 012211 1 2678888888752 23344443210
Q ss_pred C--ceeeec--CCCCc-ccccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeE-EecCCCC---CCc
Q 048136 329 P--VWTTEK--MPTPR-VMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRF-TELAPSD---IPR 399 (559)
Q Consensus 329 ~--~W~~~~--M~~~R-~~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W-t~~~~~~---~~R 399 (559)
. .+.... ..... .-.+...-|+|++++.|+.+ | .+.+||..+. +- ..+..+. ..+
T Consensus 283 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d-g------------~i~vwd~~~~---~~~~~~~~~~~~h~~~ 346 (380)
T 3iz6_a 283 QLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN-G------------DCYVWDTLLA---EMVLNLGTLQNSHEGR 346 (380)
T ss_dssp EEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT-S------------CEEEEETTTC---CEEEEECCSCSSCCCC
T ss_pred EEEEecccccccccccCceEEEEECCCCCEEEEEECC-C------------CEEEEECCCC---ceEEEEecccCCCCCc
Confidence 0 011110 00000 11123456899999998764 2 6789998766 32 2232221 112
Q ss_pred cceeeeEECCCCceEEeCCCCC
Q 048136 400 MYHSVANLLPDGRVFVGGSNDN 421 (559)
Q Consensus 400 ~yhs~a~llpdG~Vlv~GG~~~ 421 (559)
. .+..+.|||+.+++||.+.
T Consensus 347 v--~~l~~s~dg~~l~sgs~D~ 366 (380)
T 3iz6_a 347 I--SCLGLSSDGSALCTGSWDK 366 (380)
T ss_dssp C--CEEEECSSSSEEEEECTTS
T ss_pred e--EEEEECCCCCEEEEeeCCC
Confidence 1 2355789999999999753
No 57
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.25 E-value=0.048 Score=55.14 Aligned_cols=133 Identities=11% Similarity=0.037 Sum_probs=74.8
Q ss_pred eEEEeCCCCCEEeCccC--CCcccccCeecC-CCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEcc
Q 048136 102 SVFYNVNTLQVTPLKVI--TDTWCSSGGLDV-NGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLA 178 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~--~~~~c~~~~~l~-dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~ 178 (559)
..+||..+.+....... +..........+ +++++++|+.. ..+++||.. +.........-....+-.+++..+
T Consensus 98 i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d---~~i~iwd~~-~~~~~~~~~~~~~~~~v~~~~~~~ 173 (383)
T 3ei3_B 98 IILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR---GATTLRDFS-GSVIQVFAKTDSWDYWYCCVDVSV 173 (383)
T ss_dssp EEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT---TEEEEEETT-SCEEEEEECCCCSSCCEEEEEEET
T ss_pred EEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC---CEEEEEECC-CCceEEEeccCCCCCCeEEEEECC
Confidence 67899888776654332 222222334456 67888888762 588999987 555443321011122334556667
Q ss_pred CCcEEEEcCCCCCceeEEcCCCCCCCcceeccccccccccccCCccceEEEeeCCc-EEEEecC--cEEEeeCCC
Q 048136 179 DGSFLIFGGRDSFSYEYIPAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGN-LYIFANN--RSILLDPRA 250 (559)
Q Consensus 179 dG~VyvvGG~~~~s~E~yP~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~-iyv~Gg~--~~e~yDp~t 250 (559)
+++.+++|+.++ .+.+|...+. ....+ .... ..-..+...++|+ +++.|+. .+.+||..+
T Consensus 174 ~~~~l~~~~~d~-~i~i~d~~~~-----~~~~~-~~h~-----~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 174 SRQMLATGDSTG-RLLLLGLDGH-----EIFKE-KLHK-----AKVTHAEFNPRCDWLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp TTTEEEEEETTS-EEEEEETTSC-----EEEEE-ECSS-----SCEEEEEECSSCTTEEEEEETTSEEEEEEGGG
T ss_pred CCCEEEEECCCC-CEEEEECCCC-----EEEEe-ccCC-----CcEEEEEECCCCCCEEEEEeCCCEEEEEeCCC
Confidence 899999988764 4666622221 11111 1100 0111233456887 8887764 578899886
No 58
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.24 E-value=0.013 Score=57.85 Aligned_cols=222 Identities=12% Similarity=0.083 Sum_probs=116.3
Q ss_pred ecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccc-cccceEEEccCCcEEEEcCCCCCceeEE-cCCCCCCCc
Q 048136 128 LDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDG-RWYATQALLADGSFLIFGGRDSFSYEYI-PAERTENAY 205 (559)
Q Consensus 128 ~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~-R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w 205 (559)
+-+||+++++|+. + ..+++||.. +..-.. . +... ..-.++...++++.++.|+.+. ++.+| ..+++
T Consensus 21 fsp~~~~l~s~~~-d--g~v~lWd~~-~~~~~~--~-~~~~~~~v~~~~~~~~~~~l~s~s~d~-~i~vwd~~~~~---- 88 (304)
T 2ynn_A 21 FHPTEPWVLTTLY-S--GRVELWNYE-TQVEVR--S-IQVTETPVRAGKFIARKNWIIVGSDDF-RIRVFNYNTGE---- 88 (304)
T ss_dssp ECSSSSEEEEEET-T--SEEEEEETT-TTEEEE--E-EECCSSCEEEEEEEGGGTEEEEEETTS-EEEEEETTTCC----
T ss_pred ECCCCCEEEEEcC-C--CcEEEEECC-CCceeE--E-eeccCCcEEEEEEeCCCCEEEEECCCC-EEEEEECCCCc----
Confidence 4578999999987 3 589999987 554221 1 2211 1123455567899999988763 56777 44431
Q ss_pred ceeccccccccccccCCccceEEEeeCCcEEEEec--CcEEEeeCCCCe-EEEECCCCCCCCCcccCCCceeeccccccc
Q 048136 206 SIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN--NRSILLDPRANY-VLREYPPLPGGARNYPSTSTSVLLPLKLYR 282 (559)
Q Consensus 206 ~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg--~~~e~yDp~t~~-W~~~~p~mp~~~~~~p~~g~~v~lpl~~~~ 282 (559)
....+ ....+ .-..+...+++++++.|+ ..+.+||.+++. -.+.+ .+ + ......+...|
T Consensus 89 -~~~~~-~~h~~-----~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~---~~----h--~~~v~~v~~~p-- 150 (304)
T 2ynn_A 89 -KVVDF-EAHPD-----YIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTF---EG----H--EHFVMCVAFNP-- 150 (304)
T ss_dssp -EEEEE-ECCSS-----CEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEE---CC----C--CSCEEEEEECT--
T ss_pred -EEEEE-eCCCC-----cEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhh---cc----c--CCcEEEEEECC--
Confidence 11111 11100 111234457899888886 468899987763 22112 11 0 11111111111
Q ss_pred ccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeeecCCCCcccccEEE--eeCCeEEEEcCcC
Q 048136 283 DYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTEKMPTPRVMSDGVL--LPTGDVLLINGAE 360 (559)
Q Consensus 283 ~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~R~~~~av~--LpdG~V~vvGG~~ 360 (559)
.++++++.|+.+. ++..+|+........... ...+....... .++++.++.|+.+
T Consensus 151 -----~~~~~l~sgs~D~-----------------~v~iwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~s~s~D 207 (304)
T 2ynn_A 151 -----KDPSTFASGCLDR-----------------TVKVWSLGQSTPNFTLTT-GQERGVNYVDYYPLPDKPYMITASDD 207 (304)
T ss_dssp -----TCTTEEEEEETTS-----------------EEEEEETTCSSCSEEEEC-CCTTCEEEEEECCSTTCCEEEEEETT
T ss_pred -----CCCCEEEEEeCCC-----------------eEEEEECCCCCccceecc-CCcCcEEEEEEEEcCCCCEEEEEcCC
Confidence 2567888887652 344555543222222111 11111111112 2478888888764
Q ss_pred CCCCCccCCCCCCcccEEEeCCCCCCCeE-EecCCCCCCccceeeeEECCCCceEEeCCCCC
Q 048136 361 LGSAGWKDADKPCFKPLLYKPSKPPGSRF-TELAPSDIPRMYHSVANLLPDGRVFVGGSNDN 421 (559)
Q Consensus 361 ~g~~g~~~~~~~~~~~e~YDP~t~~g~~W-t~~~~~~~~R~yhs~a~llpdG~Vlv~GG~~~ 421 (559)
+ ++.+||..+. +- ..+... ...-......||+++++.|+.+.
T Consensus 208 -~------------~i~iWd~~~~---~~~~~~~~h---~~~v~~~~~~p~~~~l~s~s~Dg 250 (304)
T 2ynn_A 208 -L------------TIKIWDYQTK---SCVATLEGH---MSNVSFAVFHPTLPIIISGSEDG 250 (304)
T ss_dssp -S------------EEEEEETTTT---EEEEEEECC---SSCEEEEEECSSSSEEEEEETTS
T ss_pred -C------------eEEEEeCCCC---ccceeeCCC---CCCEEEEEECCCCCEEEEEcCCC
Confidence 1 6899999876 42 222111 11113456789999999998643
No 59
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.23 E-value=0.018 Score=57.56 Aligned_cols=239 Identities=14% Similarity=0.068 Sum_probs=119.9
Q ss_pred ecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCcccccccc-ceEEEccC--CcEEEEcCCCCCceeEE-cCCCCCC
Q 048136 128 LDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWY-ATQALLAD--GSFLIFGGRDSFSYEYI-PAERTEN 203 (559)
Q Consensus 128 ~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y-~s~~~L~d--G~VyvvGG~~~~s~E~y-P~~~~~~ 203 (559)
+-+||+.+++|+. + ..+++||.. ..++..... +...... .+++..++ ++.++.|+.++ .+.+| ..++
T Consensus 19 ~s~~~~~l~~~~~-d--g~i~iw~~~-~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~~l~s~~~dg-~v~iwd~~~~--- 89 (379)
T 3jrp_A 19 LDYYGKRLATCSS-D--KTIKIFEVE-GETHKLIDT-LTGHEGPVWRVDWAHPKFGTILASCSYDG-KVLIWKEENG--- 89 (379)
T ss_dssp ECSSSSEEEEEET-T--SCEEEEEEE-TTEEEEEEE-ECCCSSCEEEEEECCGGGCSEEEEEETTS-CEEEEEEETT---
T ss_pred EcCCCCEEEEEEC-C--CcEEEEecC-CCcceeeeE-ecCCCCcEEEEEeCCCCCCCEEEEeccCC-EEEEEEcCCC---
Confidence 4468999999886 3 478888876 556655432 3322222 22333344 88999988764 46666 3332
Q ss_pred CcceeccccccccccccCCccceEEEeeC--CcEEEEecC--cEEEeeCCCCeEEEECCCCCCCCCcccCCCceeecccc
Q 048136 204 AYSIPFQFLRDTYDVLENNLYPFVYLVPD--GNLYIFANN--RSILLDPRANYVLREYPPLPGGARNYPSTSTSVLLPLK 279 (559)
Q Consensus 204 ~w~~~~p~l~~~~d~~~~~~yp~~~~l~~--G~iyv~Gg~--~~e~yDp~t~~W~~~~p~mp~~~~~~p~~g~~v~lpl~ 279 (559)
.+.....+. ... ..-..+...++ |++++.|+. .+.+||..++...... .+.. . ......+...
T Consensus 90 ~~~~~~~~~-~~~-----~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~-~~~~----~--~~~v~~~~~~ 156 (379)
T 3jrp_A 90 RWSQIAVHA-VHS-----ASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPI-IIDA----H--AIGVNSASWA 156 (379)
T ss_dssp EEEEEEEEC-CCS-----SCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEE-EEEC----C--TTCEEEEEEC
T ss_pred ceeEeeeec-CCC-----cceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeE-EecC----C--CCceEEEEEc
Confidence 122221111 000 01112233456 888888764 5788998776211000 0000 0 0111111111
Q ss_pred ccc-----ccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeee-cCC--CCcccccEEEeeC-
Q 048136 280 LYR-----DYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTE-KMP--TPRVMSDGVLLPT- 350 (559)
Q Consensus 280 ~~~-----~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~--~~R~~~~av~Lpd- 350 (559)
+.. ......+++.+++|+.+ ..+..||+......|... .+. ...... ...-|+
T Consensus 157 ~~~~~~~~~~~~~~~~~~l~~~~~d-----------------g~i~i~d~~~~~~~~~~~~~~~~h~~~v~~-~~~sp~~ 218 (379)
T 3jrp_A 157 PATIEEDGEHNGTKESRKFVTGGAD-----------------NLVKIWKYNSDAQTYVLESTLEGHSDWVRD-VAWSPTV 218 (379)
T ss_dssp CCC----------CTTCEEEEEETT-----------------SCEEEEEEETTTTEEEEEEEECCCSSCEEE-EEECCCC
T ss_pred CccccccccccCCCCCCEEEEEeCC-----------------CeEEEEEecCCCcceeeEEEEecccCcEeE-EEECCCC
Confidence 000 00000146778888754 245677776544455543 332 222222 345678
Q ss_pred --CeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCC-eEEecCCCCCCccceeeeEECCCCceEEeCCCC
Q 048136 351 --GDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGS-RFTELAPSDIPRMYHSVANLLPDGRVFVGGSND 420 (559)
Q Consensus 351 --G~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~-~Wt~~~~~~~~R~yhs~a~llpdG~Vlv~GG~~ 420 (559)
++++++|+.+ | .+.+||..+.... ............. -......|||+.+++|+..
T Consensus 219 ~~~~~l~s~~~d-g------------~i~iwd~~~~~~~~~~~~~~~~~~~~~-v~~~~~s~~g~~l~~~~~d 277 (379)
T 3jrp_A 219 LLRSYLASVSQD-R------------TCIIWTQDNEQGPWKKTLLKEEKFPDV-LWRASWSLSGNVLALSGGD 277 (379)
T ss_dssp SSSEEEEEEETT-S------------CEEEEEESSTTSCCEEEESSSSCCSSC-EEEEEECSSSCCEEEEESS
T ss_pred CCCCeEEEEeCC-C------------EEEEEeCCCCCccceeeeeccccCCCc-EEEEEEcCCCCEEEEecCC
Confidence 8999998765 2 5789998775211 1112221111111 2234678999999988864
No 60
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=97.22 E-value=0.057 Score=59.94 Aligned_cols=226 Identities=12% Similarity=0.068 Sum_probs=113.6
Q ss_pred cCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccc-cccccceEEEccCCcEEEEcCCCCCceeEE-cCCCCC
Q 048136 125 SGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALK-DGRWYATQALLADGSFLIFGGRDSFSYEYI-PAERTE 202 (559)
Q Consensus 125 ~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~-~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~ 202 (559)
...+.+||+++++|+.. ..+++||.. +.+-.. . +. +...-.+++..++|+.++.|+.+. ++.+| .....
T Consensus 435 ~v~~s~~g~~l~sgs~D---g~v~vwd~~-~~~~~~--~-~~~h~~~v~~~~~s~~~~~l~s~s~D~-~i~iwd~~~~~- 505 (694)
T 3dm0_A 435 DVVLSSDGQFALSGSWD---GELRLWDLA-AGVSTR--R-FVGHTKDVLSVAFSLDNRQIVSASRDR-TIKLWNTLGEC- 505 (694)
T ss_dssp EEEECTTSSEEEEEETT---SEEEEEETT-TTEEEE--E-EECCSSCEEEEEECTTSSCEEEEETTS-CEEEECTTSCE-
T ss_pred EEEECCCCCEEEEEeCC---CcEEEEECC-CCccee--E-EeCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEECCCCc-
Confidence 34556799999999873 589999987 543221 1 21 222233455567899998888764 46666 22110
Q ss_pred CCcceeccccccccccccCCccceEEEeeCC--cEEEEec--CcEEEeeCCCCeEEEECCCCCCCCCcccCCCceeeccc
Q 048136 203 NAYSIPFQFLRDTYDVLENNLYPFVYLVPDG--NLYIFAN--NRSILLDPRANYVLREYPPLPGGARNYPSTSTSVLLPL 278 (559)
Q Consensus 203 ~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G--~iyv~Gg--~~~e~yDp~t~~W~~~~p~mp~~~~~~p~~g~~v~lpl 278 (559)
-........... ..-.++...+++ .+++.|+ ..+.+||..+++-...+. + + .+....+..
T Consensus 506 --~~~~~~~~~~h~-----~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~---~----h--~~~v~~v~~ 569 (694)
T 3dm0_A 506 --KYTISEGGEGHR-----DWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLA---G----H--TGYVSTVAV 569 (694)
T ss_dssp --EEEECSSTTSCS-----SCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEEC---C----C--SSCEEEEEE
T ss_pred --ceeeccCCCCCC-----CcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEc---C----C--CCCEEEEEE
Confidence 000000000000 011122233454 4566664 468899998876553332 1 0 111111111
Q ss_pred ccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeee-cCCCCcccccEEEeeCCeEEEEc
Q 048136 279 KLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTE-KMPTPRVMSDGVLLPTGDVLLIN 357 (559)
Q Consensus 279 ~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~av~LpdG~V~vvG 357 (559)
. .+++++++|+.+. ++..+|+.. . ... .+.....-.+...-||+++++.+
T Consensus 570 s--------pdg~~l~sg~~Dg-----------------~i~iwd~~~--~--~~~~~~~~~~~v~~~~~sp~~~~l~~~ 620 (694)
T 3dm0_A 570 S--------PDGSLCASGGKDG-----------------VVLLWDLAE--G--KKLYSLEANSVIHALCFSPNRYWLCAA 620 (694)
T ss_dssp C--------TTSSEEEEEETTS-----------------BCEEEETTT--T--EEEECCBCSSCEEEEEECSSSSEEEEE
T ss_pred e--------CCCCEEEEEeCCC-----------------eEEEEECCC--C--ceEEEecCCCcEEEEEEcCCCcEEEEE
Confidence 1 2688888888652 234455442 1 111 22111122223455788877665
Q ss_pred CcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEe-cCC--------------C--CCCccceeeeEECCCCceEEeCCCC
Q 048136 358 GAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTE-LAP--------------S--DIPRMYHSVANLLPDGRVFVGGSND 420 (559)
Q Consensus 358 G~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~-~~~--------------~--~~~R~yhs~a~llpdG~Vlv~GG~~ 420 (559)
... .+.+||.++. +-.. +.. . .....+.......|||+.+++|+.+
T Consensus 621 ~~~--------------~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~D 683 (694)
T 3dm0_A 621 TEH--------------GIKIWDLESK---SIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTD 683 (694)
T ss_dssp ETT--------------EEEEEETTTT---EEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETT
T ss_pred cCC--------------CEEEEECCCC---CChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCC
Confidence 321 4678888765 3221 110 0 0001122334568999999999865
Q ss_pred C
Q 048136 421 N 421 (559)
Q Consensus 421 ~ 421 (559)
.
T Consensus 684 g 684 (694)
T 3dm0_A 684 G 684 (694)
T ss_dssp S
T ss_pred C
Confidence 3
No 61
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.22 E-value=0.024 Score=58.15 Aligned_cols=233 Identities=13% Similarity=0.055 Sum_probs=118.1
Q ss_pred CeecC-CCcEEEEcCCCCCCCeEEEEeCCCCCCee-----cCCCccc-cccccceEEEccCC-cEEEEcCCCCCceeEE-
Q 048136 126 GGLDV-NGNLISTGGFLGGSRTTRYLWGCPTCDWT-----EYPTALK-DGRWYATQALLADG-SFLIFGGRDSFSYEYI- 196 (559)
Q Consensus 126 ~~~l~-dG~i~v~GG~~~g~~~v~~ydp~~t~~W~-----~~~~~m~-~~R~y~s~~~L~dG-~VyvvGG~~~~s~E~y- 196 (559)
....+ +++++++|+. + ..+++||.. +.... .+.. +. +...-.+++..++| ++++.|+.++ .+.+|
T Consensus 87 ~~~~p~~~~~l~s~s~-d--g~v~vw~~~-~~~~~~~~~~~~~~-~~~h~~~v~~~~~~p~~~~~l~s~~~dg-~i~iwd 160 (402)
T 2aq5_A 87 IAWCPHNDNVIASGSE-D--CTVMVWEIP-DGGLVLPLREPVIT-LEGHTKRVGIVAWHPTAQNVLLSAGCDN-VILVWD 160 (402)
T ss_dssp EEECTTCTTEEEEEET-T--SEEEEEECC-TTCCSSCBCSCSEE-EECCSSCEEEEEECSSBTTEEEEEETTS-CEEEEE
T ss_pred EEeCCCCCCEEEEEeC-C--CeEEEEEcc-CCCCccccCCceEE-ecCCCCeEEEEEECcCCCCEEEEEcCCC-EEEEEE
Confidence 34456 8999999986 3 579999987 55432 1111 22 22233345556677 6888888764 46677
Q ss_pred cCCCCCCCcceecccc-ccccccccCCccceEEEeeCCcEEEEec--CcEEEeeCCCCeEEEECCCCCCCCCcccCCCce
Q 048136 197 PAERTENAYSIPFQFL-RDTYDVLENNLYPFVYLVPDGNLYIFAN--NRSILLDPRANYVLREYPPLPGGARNYPSTSTS 273 (559)
Q Consensus 197 P~~~~~~~w~~~~p~l-~~~~d~~~~~~yp~~~~l~~G~iyv~Gg--~~~e~yDp~t~~W~~~~p~mp~~~~~~p~~g~~ 273 (559)
..++ .....+. .... ..-..+...++|++++.|+ ..+.+||+++++....+.... .. ......
T Consensus 161 ~~~~-----~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~---~~-~~~~~~ 226 (402)
T 2aq5_A 161 VGTG-----AAVLTLGPDVHP-----DTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPH---EG-TRPVHA 226 (402)
T ss_dssp TTTT-----EEEEEECTTTCC-----SCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSS---CS-SSCCEE
T ss_pred CCCC-----CccEEEecCCCC-----CceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCC---CC-CcceEE
Confidence 4432 1111110 1100 0111233456898888876 458899999887654331111 00 000112
Q ss_pred eecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeeecCCCCcccccEEEeeCCeE
Q 048136 274 VLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTEKMPTPRVMSDGVLLPTGDV 353 (559)
Q Consensus 274 v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~R~~~~av~LpdG~V 353 (559)
+.. .+++++++|.... ....+..+|+......-....+.....-.....-+||+.
T Consensus 227 ~~~-----------~~~~~l~~g~~~~--------------~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 281 (402)
T 2aq5_A 227 VFV-----------SEGKILTTGFSRM--------------SERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNI 281 (402)
T ss_dssp EEC-----------STTEEEEEEECTT--------------CCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTE
T ss_pred EEc-----------CCCcEEEEeccCC--------------CCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCE
Confidence 222 2788888883210 012345666553111111112222222222345678887
Q ss_pred EEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCe--EEecCCCCCCccceeeeEECCCCceEEeCCC
Q 048136 354 LLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSR--FTELAPSDIPRMYHSVANLLPDGRVFVGGSN 419 (559)
Q Consensus 354 ~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~--Wt~~~~~~~~R~yhs~a~llpdG~Vlv~GG~ 419 (559)
+++.|...+ .+.+||..+. + ...+...... .......+.|||++++.+++
T Consensus 282 l~~~g~~dg------------~i~i~d~~~~---~~~~~~l~~~~~~-~~v~~~~~sp~~~~~~s~~~ 333 (402)
T 2aq5_A 282 VYLCGKGDS------------SIRYFEITSE---APFLHYLSMFSSK-ESQRGMGYMPKRGLEVNKCE 333 (402)
T ss_dssp EEEEETTCS------------CEEEEEECSS---TTCEEEEEEECCS-SCCSEEEECCGGGSCGGGTE
T ss_pred EEEEEcCCC------------eEEEEEecCC---CcceEeecccccC-CcccceEEecccccceecce
Confidence 754442211 5789998876 3 3333222111 11124567899999887664
No 62
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.21 E-value=0.033 Score=62.45 Aligned_cols=133 Identities=13% Similarity=0.086 Sum_probs=75.0
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccc-cccccceEEEccCC
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALK-DGRWYATQALLADG 180 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~-~~R~y~s~~~L~dG 180 (559)
..+||..+++....-..+..........+||+.+++|+. + ..+.+||.. +.+.... +. +...-.+.+..++|
T Consensus 37 v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-d--g~i~vw~~~-~~~~~~~---~~~~~~~v~~~~~s~~~ 109 (814)
T 3mkq_A 37 VEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSD-D--FRIRVFNYN-TGEKVVD---FEAHPDYIRSIAVHPTK 109 (814)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEET-T--SEEEEEETT-TCCEEEE---EECCSSCEEEEEECSSS
T ss_pred EEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeC-C--CeEEEEECC-CCcEEEE---EecCCCCEEEEEEeCCC
Confidence 678888776554322223333334556779999999986 3 589999987 6654321 22 22222345566789
Q ss_pred cEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEee-CCcEEEEec--CcEEEeeCCCCe
Q 048136 181 SFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVP-DGNLYIFAN--NRSILLDPRANY 252 (559)
Q Consensus 181 ~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~-~G~iyv~Gg--~~~e~yDp~t~~ 252 (559)
+.+++|+.++ .+.+| ...+ +.....+ .... ..-..+...+ +|+++++|+ ..+.+||..+..
T Consensus 110 ~~l~~~~~dg-~i~vw~~~~~----~~~~~~~-~~~~-----~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~ 174 (814)
T 3mkq_A 110 PYVLSGSDDL-TVKLWNWENN----WALEQTF-EGHE-----HFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQST 174 (814)
T ss_dssp SEEEEEETTS-EEEEEEGGGT----SEEEEEE-ECCS-----SCEEEEEEETTEEEEEEEEETTSEEEEEETTCSS
T ss_pred CEEEEEcCCC-EEEEEECCCC----ceEEEEE-cCCC-----CcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 8888887653 46677 4332 2211111 1110 0011122345 778888876 457889986653
No 63
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.14 E-value=0.091 Score=53.09 Aligned_cols=63 Identities=14% Similarity=-0.043 Sum_probs=38.4
Q ss_pred CeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCcEEEEcCCCCCceeEE
Q 048136 126 GGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGSFLIFGGRDSFSYEYI 196 (559)
Q Consensus 126 ~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y 196 (559)
....+||+++++|+. + ..+.+||.. ...-..+. .....-.+++..++|+.+++|+.++ .+.+|
T Consensus 114 ~~~s~~~~~l~~~~~-d--g~i~i~~~~-~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~-~i~iw 176 (425)
T 1r5m_A 114 LAWSHDGNSIVTGVE-N--GELRLWNKT-GALLNVLN---FHRAPIVSVKWNKDGTHIISMDVEN-VTILW 176 (425)
T ss_dssp EEECTTSSEEEEEET-T--SCEEEEETT-SCEEEEEC---CCCSCEEEEEECTTSSEEEEEETTC-CEEEE
T ss_pred EEEcCCCCEEEEEeC-C--CeEEEEeCC-CCeeeecc---CCCccEEEEEECCCCCEEEEEecCC-eEEEE
Confidence 345679999999886 3 478899954 32222221 1222233455667899888888754 35555
No 64
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=97.07 E-value=0.14 Score=51.82 Aligned_cols=264 Identities=9% Similarity=0.062 Sum_probs=127.5
Q ss_pred eEEEeCCCCCEE-eCccC-CCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCC--CeecCCCccc-cccccceEEE
Q 048136 102 SVFYNVNTLQVT-PLKVI-TDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTC--DWTEYPTALK-DGRWYATQAL 176 (559)
Q Consensus 102 ~~~yDp~t~~w~-~~~~~-~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~--~W~~~~~~m~-~~R~y~s~~~ 176 (559)
..+||..+++-. .+... +..........+||+++++|+. + ..+++||.. +. ....+.. +. +...-.+++.
T Consensus 47 v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-d--g~v~vw~~~-~~~~~~~~~~~-~~~h~~~v~~~~~ 121 (416)
T 2pm9_A 47 LELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALD-N--GSLELYSTN-EANNAINSMAR-FSNHSSSVKTVKF 121 (416)
T ss_dssp CEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEES-S--SCEEEECCS-STTSCCCEEEE-CCCSSSCCCEEEE
T ss_pred EEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEcc-C--CeEEEeecc-cccccccchhh-ccCCccceEEEEE
Confidence 688998776432 22211 2222223345679999999876 2 478999987 41 1111111 22 2222334555
Q ss_pred ccC-CcEEEEcCCCCCceeEE-cCCCCCCC---cceeccccccccccccCCccceEEEeeC-CcEEEEecC--cEEEeeC
Q 048136 177 LAD-GSFLIFGGRDSFSYEYI-PAERTENA---YSIPFQFLRDTYDVLENNLYPFVYLVPD-GNLYIFANN--RSILLDP 248 (559)
Q Consensus 177 L~d-G~VyvvGG~~~~s~E~y-P~~~~~~~---w~~~~p~l~~~~d~~~~~~yp~~~~l~~-G~iyv~Gg~--~~e~yDp 248 (559)
.++ +++++.|+.++ .+.+| ..+..... ............ ..-..+...++ +++++.|+. .+.+||.
T Consensus 122 ~~~~~~~l~s~~~dg-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~ 195 (416)
T 2pm9_A 122 NAKQDNVLASGGNNG-EIFIWDMNKCTESPSNYTPLTPGQSMSSV-----DEVISLAWNQSLAHVFASAGSSNFASIWDL 195 (416)
T ss_dssp CSSSTTBEEEECSSS-CEEBCBTTTTSSCTTTCCCBCCCCSCCSS-----CCCCEEEECSSCTTEEEEESSSSCEEEEET
T ss_pred cCCCCCEEEEEcCCC-eEEEEECCCCccccccccccccccccCCC-----CCeeEEEeCCCCCcEEEEEcCCCCEEEEEC
Confidence 666 88888888764 45566 33221000 000000000000 01112334556 788888764 5889999
Q ss_pred CCCeEEEECCCCCCCCCcccCCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCC
Q 048136 249 RANYVLREYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPD 328 (559)
Q Consensus 249 ~t~~W~~~~p~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~ 328 (559)
.+++....+.. +...... ......+...+ .+.+++++|+.+.. ...+..||+....
T Consensus 196 ~~~~~~~~~~~-~~~~~~~--~~~v~~~~~~~-------~~~~~l~~~~~d~~--------------~~~i~~~d~~~~~ 251 (416)
T 2pm9_A 196 KAKKEVIHLSY-TSPNSGI--KQQLSVVEWHP-------KNSTRVATATGSDN--------------DPSILIWDLRNAN 251 (416)
T ss_dssp TTTEEEEEECC-CCCSSCC--CCCEEEEEECS-------SCTTEEEEEECCSS--------------SCCCCEEETTSTT
T ss_pred CCCCcceEEec-ccccccc--CCceEEEEECC-------CCCCEEEEEECCCC--------------CceEEEEeCCCCC
Confidence 98876543321 1000000 01111111111 12357777765421 0144566765311
Q ss_pred CceeeecCC--CCcccccEEEee-CCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCccceeee
Q 048136 329 PVWTTEKMP--TPRVMSDGVLLP-TGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVA 405 (559)
Q Consensus 329 ~~W~~~~M~--~~R~~~~av~Lp-dG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a 405 (559)
-....+. ....-.+....| +++++++|+.+ + .+.+||..+. +.-..+.... ... ...
T Consensus 252 --~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d-g------------~v~~wd~~~~--~~~~~~~~~~-~~v--~~~ 311 (416)
T 2pm9_A 252 --TPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRD-N------------TVLLWNPESA--EQLSQFPARG-NWC--FKT 311 (416)
T ss_dssp --SCSBCCCSCCSSCEEEEEECSSCSSCEEEEESS-S------------EEEEECSSSC--CEEEEEECSS-SCC--CCE
T ss_pred --CCcEEeecCccCceeEEEeCCCCCCeEEEEeCC-C------------CEEEeeCCCC--ccceeecCCC-Cce--EEE
Confidence 1111222 111112223346 89999998764 1 6889998776 1222222111 111 235
Q ss_pred EECCCC-ceEEeCCCC
Q 048136 406 NLLPDG-RVFVGGSND 420 (559)
Q Consensus 406 ~llpdG-~Vlv~GG~~ 420 (559)
...||| +++++|+.+
T Consensus 312 ~~s~~~~~~l~s~~~d 327 (416)
T 2pm9_A 312 KFAPEAPDLFACASFD 327 (416)
T ss_dssp EECTTCTTEEEECCSS
T ss_pred EECCCCCCEEEEEecC
Confidence 577999 899999864
No 65
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.05 E-value=0.11 Score=53.80 Aligned_cols=133 Identities=14% Similarity=0.014 Sum_probs=71.6
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCc
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGS 181 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~ 181 (559)
..+||..+.+....-..+... -..+..+++++++|+. + ..+.+||.. +.+-... +......-..... ++.
T Consensus 155 i~iwd~~~~~~~~~~~~h~~~--v~~l~~~~~~l~sg~~-d--g~i~vwd~~-~~~~~~~---~~~h~~~v~~l~~-~~~ 224 (435)
T 1p22_A 155 IKIWDKNTLECKRILTGHTGS--VLCLQYDERVIITGSS-D--STVRVWDVN-TGEMLNT---LIHHCEAVLHLRF-NNG 224 (435)
T ss_dssp EEEEESSSCCEEEEECCCSSC--EEEEECCSSEEEEEET-T--SCEEEEESS-SCCEEEE---ECCCCSCEEEEEC-CTT
T ss_pred EEEEeCCCCeEEEEEcCCCCc--EEEEEECCCEEEEEcC-C--CeEEEEECC-CCcEEEE---EcCCCCcEEEEEE-cCC
Confidence 678888776654332222211 1122338999999987 3 579999987 5543221 2222222233344 567
Q ss_pred EEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEec--CcEEEeeCCCCeEEE
Q 048136 182 FLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN--NRSILLDPRANYVLR 255 (559)
Q Consensus 182 VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg--~~~e~yDp~t~~W~~ 255 (559)
.++.|+.++ .+.+| ..+.. .......+... ..+...+..+|+.++.|+ ..+.+||..+++-..
T Consensus 225 ~l~s~s~dg-~i~vwd~~~~~---~~~~~~~~~~~-------~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 290 (435)
T 1p22_A 225 MMVTCSKDR-SIAVWDMASPT---DITLRRVLVGH-------RAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVR 290 (435)
T ss_dssp EEEEEETTS-CEEEEECSSSS---CCEEEEEECCC-------SSCEEEEEEETTEEEEEETTSEEEEEETTTCCEEE
T ss_pred EEEEeeCCC-cEEEEeCCCCC---CceeeeEecCC-------CCcEEEEEeCCCEEEEEeCCCeEEEEECCcCcEEE
Confidence 788887654 56677 33321 11000111111 112233444888888876 457899998876554
No 66
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.05 E-value=0.0048 Score=62.38 Aligned_cols=112 Identities=8% Similarity=0.046 Sum_probs=61.2
Q ss_pred eecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccc-cccceEEEccCCcEEEEcCCCCCceeEE-cCCCCCCC
Q 048136 127 GLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDG-RWYATQALLADGSFLIFGGRDSFSYEYI-PAERTENA 204 (559)
Q Consensus 127 ~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~-R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~ 204 (559)
.+-+||+++++|+. + ..+++||.. +..|..... +... ..-.+++..++|+.++.|+.++ ++.+| ..++. .
T Consensus 18 ~~s~~g~~l~~~~~-d--~~i~iw~~~-~~~~~~~~~-~~~h~~~v~~~~~s~~~~~l~s~s~d~-~v~vwd~~~~~--~ 89 (377)
T 3dwl_C 18 AFNSQRTEFVTTTA-T--NQVELYEQD-GNGWKHART-FSDHDKIVTCVDWAPKSNRIVTCSQDR-NAYVYEKRPDG--T 89 (377)
T ss_dssp EECSSSSEEECCCS-S--SCBCEEEEE-TTEEEECCC-BCCCSSCEEEEEECTTTCCEEEEETTS-SEEEC--------C
T ss_pred EECCCCCEEEEecC-C--CEEEEEEcc-CCceEEEEE-EecCCceEEEEEEeCCCCEEEEEeCCC-eEEEEEcCCCC--c
Confidence 44568999999876 2 478889988 777766643 4432 2234455667899888888764 46666 33321 0
Q ss_pred cceeccccccccccccCCccceEEEeeCCcEEEEecC--cEEEeeCCCCe
Q 048136 205 YSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFANN--RSILLDPRANY 252 (559)
Q Consensus 205 w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg~--~~e~yDp~t~~ 252 (559)
+.....+. ... ..-..+...++|++++.|+. .+.+||..+++
T Consensus 90 ~~~~~~~~-~~~-----~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 133 (377)
T 3dwl_C 90 WKQTLVLL-RLN-----RAATFVRWSPNEDKFAVGSGARVISVCYFEQEN 133 (377)
T ss_dssp CCCEEECC-CCS-----SCEEEEECCTTSSCCEEEESSSCEEECCC----
T ss_pred eeeeeEec-ccC-----CceEEEEECCCCCEEEEEecCCeEEEEEECCcc
Confidence 11111111 100 01111223458888888763 57889988764
No 67
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.04 E-value=0.042 Score=55.69 Aligned_cols=132 Identities=11% Similarity=-0.014 Sum_probs=64.9
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCcccccc------------
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGR------------ 169 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R------------ 169 (559)
..+||........+. .+..........++|+.+++|+.. ..+.+||.. +.+....-. .....
T Consensus 132 i~i~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d---~~i~iwd~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~ 205 (425)
T 1r5m_A 132 LRLWNKTGALLNVLN-FHRAPIVSVKWNKDGTHIISMDVE---NVTILWNVI-SGTVMQHFE-LKETGGSSINAENHSGD 205 (425)
T ss_dssp EEEEETTSCEEEEEC-CCCSCEEEEEECTTSSEEEEEETT---CCEEEEETT-TTEEEEEEC-CC---------------
T ss_pred EEEEeCCCCeeeecc-CCCccEEEEEECCCCCEEEEEecC---CeEEEEECC-CCcEEEEee-ccccCccceeeccccCC
Confidence 567884333333332 222222234456789988888762 468889886 444322100 11110
Q ss_pred --ccceEEEccCCcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEec--CcEE
Q 048136 170 --WYATQALLADGSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN--NRSI 244 (559)
Q Consensus 170 --~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg--~~~e 244 (559)
...+++..+++ .+++|+.++ .+.+| ....+ -. ..+ .... ..-..+...++|++++.++ ..+.
T Consensus 206 ~~~~~~~~~~~~~-~~~~~~~~g-~i~~~d~~~~~---~~--~~~-~~~~-----~~i~~~~~~~~~~~l~~~~~d~~i~ 272 (425)
T 1r5m_A 206 GSLGVDVEWVDDD-KFVIPGPKG-AIFVYQITEKT---PT--GKL-IGHH-----GPISVLEFNDTNKLLLSASDDGTLR 272 (425)
T ss_dssp CCCBSCCEEEETT-EEEEECGGG-CEEEEETTCSS---CS--EEE-CCCS-----SCEEEEEEETTTTEEEEEETTSCEE
T ss_pred cceeeEEEEcCCC-EEEEEcCCC-eEEEEEcCCCc---ee--eee-ccCC-----CceEEEEECCCCCEEEEEcCCCEEE
Confidence 02334445455 466676553 45666 43321 11 111 0000 0111233456888888876 3578
Q ss_pred EeeCCCCe
Q 048136 245 LLDPRANY 252 (559)
Q Consensus 245 ~yDp~t~~ 252 (559)
+||..+.+
T Consensus 273 i~d~~~~~ 280 (425)
T 1r5m_A 273 IWHGGNGN 280 (425)
T ss_dssp EECSSSBS
T ss_pred EEECCCCc
Confidence 89987754
No 68
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=97.04 E-value=0.13 Score=56.10 Aligned_cols=138 Identities=9% Similarity=0.019 Sum_probs=74.3
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeec-C-CCcc---ccccccceEEE
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTE-Y-PTAL---KDGRWYATQAL 176 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~-~-~~~m---~~~R~y~s~~~ 176 (559)
..+||..+.+....-..|........+-+||++++.|+. | ..+++||.. +.+... + ...+ .+...-.+++.
T Consensus 172 v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~-D--~~i~lwd~~-~g~~~~~~~~~~~~~~~h~~~V~~v~~ 247 (611)
T 1nr0_A 172 VAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGG-D--GTIVLYNGV-DGTKTGVFEDDSLKNVAHSGSVFGLTW 247 (611)
T ss_dssp EEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEET-T--SCEEEEETT-TCCEEEECBCTTSSSCSSSSCEEEEEE
T ss_pred EEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEEC-C--CcEEEEECC-CCcEeeeeccccccccccCCCEEEEEE
Confidence 677886655443221223333333456789999999987 3 579999987 554322 1 0001 22233345666
Q ss_pred ccCCcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEec--CcEEEeeCCCCeE
Q 048136 177 LADGSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN--NRSILLDPRANYV 253 (559)
Q Consensus 177 L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg--~~~e~yDp~t~~W 253 (559)
-+||+.++.|+.+. ++.+| ..+.+ .....+..... ......+..+++.++.++ ..+.+||+.+++-
T Consensus 248 spdg~~l~s~s~D~-~v~lWd~~~~~---~~~~~~~~~~~-------~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~ 316 (611)
T 1nr0_A 248 SPDGTKIASASADK-TIKIWNVATLK---VEKTIPVGTRI-------EDQQLGIIWTKQALVSISANGFINFVNPELGSI 316 (611)
T ss_dssp CTTSSEEEEEETTS-EEEEEETTTTE---EEEEEECCSSG-------GGCEEEEEECSSCEEEEETTCCEEEEETTTTEE
T ss_pred CCCCCEEEEEeCCC-eEEEEeCCCCc---eeeeecCCCCc-------cceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCc
Confidence 67999999998764 56777 44321 11111110000 001122333666666654 4577899888764
Q ss_pred E
Q 048136 254 L 254 (559)
Q Consensus 254 ~ 254 (559)
.
T Consensus 317 ~ 317 (611)
T 1nr0_A 317 D 317 (611)
T ss_dssp E
T ss_pred c
Confidence 3
No 69
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=97.03 E-value=0.19 Score=53.59 Aligned_cols=242 Identities=12% Similarity=0.103 Sum_probs=122.1
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCc
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGS 181 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~ 181 (559)
..+||........+.. +.......++.+||+.+++|+. + ..+++||.. ...-..+.. ....-.+++..+||+
T Consensus 286 i~~w~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~t~~~-d--~~i~~w~~~-~~~~~~~~~---~~~~v~~~~~s~~g~ 357 (577)
T 2ymu_A 286 VKLWNRNGQLLQTLTG-HSSSVWGVAFSPDGQTIASASD-D--KTVKLWNRN-GQHLQTLTG---HSSSVWGVAFSPDGQ 357 (577)
T ss_dssp EEEEETTSCEEEEECC-CSSCEEEEEECTTSSEEEEEET-T--SCEEEEETT-SCEEEEECC---CSSCEEEEEECTTSS
T ss_pred EEEEeCCCcEEEEEec-CCCCeEEEEECCCCCEEEEEeC-C--CeEEEEeCC-CCeeEEEeC---CCCCEEEEEECCCCC
Confidence 5677765443333321 2211222345679999999876 2 478889976 443322211 111123455667999
Q ss_pred EEEEcCCCCCceeEEcCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEecC--cEEEeeCCCCeEEEECCC
Q 048136 182 FLIFGGRDSFSYEYIPAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFANN--RSILLDPRANYVLREYPP 259 (559)
Q Consensus 182 VyvvGG~~~~s~E~yP~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg~--~~e~yDp~t~~W~~~~p~ 259 (559)
.++.|+.++ .+.+|..+. .....+ .... ..--.+...+||+.++.|+. .+.+||..... .+.+..
T Consensus 358 ~l~~~~~dg-~v~~~~~~~-----~~~~~~-~~~~-----~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~-~~~~~~ 424 (577)
T 2ymu_A 358 TIASASDDK-TVKLWNRNG-----QLLQTL-TGHS-----SSVRGVAFSPDGQTIASASDDKTVKLWNRNGQL-LQTLTG 424 (577)
T ss_dssp EEEEEETTS-EEEEEETTC-----CEEEEE-ECCS-----SCEEEEEECTTSSCEEEEETTSEEEEECTTCCE-EEEEEC
T ss_pred EEEEEeCCC-EEEEEcCCC-----CEEEEe-cCCC-----CCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCE-EEEecC
Confidence 999888654 456664322 111111 1100 01112334578998888764 57788864433 222211
Q ss_pred CCCCCCcccCCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeeecCCCC
Q 048136 260 LPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTEKMPTP 339 (559)
Q Consensus 260 mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~ 339 (559)
+ ......+... .+++.+++++.+. ++..+|... ..-....-...
T Consensus 425 -------~--~~~v~~~~~s--------~d~~~l~~~~~d~-----------------~v~~w~~~~--~~~~~~~~~~~ 468 (577)
T 2ymu_A 425 -------H--SSSVWGVAFS--------PDDQTIASASDDK-----------------TVKLWNRNG--QLLQTLTGHSS 468 (577)
T ss_dssp -------C--SSCEEEEEEC--------TTSSEEEEEETTS-----------------EEEEEETTS--CEEEEEECCSS
T ss_pred -------C--CCCeEEEEEC--------CCCCEEEEEcCCC-----------------EEEEEECCC--CEEEEEcCCCC
Confidence 1 0111111111 2677778776542 233444321 11111111222
Q ss_pred cccccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCccceeeeEECCCCceEEeCCC
Q 048136 340 RVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANLLPDGRVFVGGSN 419 (559)
Q Consensus 340 R~~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~llpdG~Vlv~GG~ 419 (559)
.... ...-|||+++++++.+. .+.+||.... .-..+... .... ....+.|||+.+++|+.
T Consensus 469 ~v~~-~~~spd~~~las~~~d~-------------~i~iw~~~~~---~~~~~~~h-~~~v--~~l~~s~dg~~l~s~~~ 528 (577)
T 2ymu_A 469 SVRG-VAFSPDGQTIASASDDK-------------TVKLWNRNGQ---LLQTLTGH-SSSV--RGVAFSPDGQTIASASD 528 (577)
T ss_dssp CEEE-EEECTTSCEEEEEETTS-------------EEEEEETTSC---EEEEEECC-SSCE--EEEEECTTSSCEEEEET
T ss_pred CEEE-EEEcCCCCEEEEEeCCC-------------EEEEEcCCCC---EEEEEeCC-CCCE--EEEEEcCCCCEEEEEEC
Confidence 2222 45668999999987541 6789996543 33333211 1111 13456799999999886
Q ss_pred C
Q 048136 420 D 420 (559)
Q Consensus 420 ~ 420 (559)
+
T Consensus 529 d 529 (577)
T 2ymu_A 529 D 529 (577)
T ss_dssp T
T ss_pred c
Confidence 4
No 70
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=96.99 E-value=0.16 Score=50.90 Aligned_cols=92 Identities=11% Similarity=-0.072 Sum_probs=48.0
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCC-CCCeEEEE--eCCCCCCeecCCCccccccccceEEEcc
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLG-GSRTTRYL--WGCPTCDWTEYPTALKDGRWYATQALLA 178 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~-g~~~v~~y--dp~~t~~W~~~~~~m~~~R~y~s~~~L~ 178 (559)
...+|+++++++.+...+...-...++-+||+.+.++...+ ....+.+| |+. +.+.+.+.. .......+....+
T Consensus 31 ~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~-~g~~~~~~~-~~~~~~~p~~~~~- 107 (361)
T 3scy_A 31 TFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKE-KGTLHLLNT-QKTMGADPCYLTT- 107 (361)
T ss_dssp EEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETT-TTEEEEEEE-EECSSSCEEEEEE-
T ss_pred EEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCC-CCcEEEeeE-eccCCCCcEEEEE-
Confidence 56678889988876543211112235567898555544321 23455555 554 456655432 3222223333444
Q ss_pred CCcEEEEcCCCCCceeEE
Q 048136 179 DGSFLIFGGRDSFSYEYI 196 (559)
Q Consensus 179 dG~VyvvGG~~~~s~E~y 196 (559)
||+.+++......++.+|
T Consensus 108 dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 108 NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp CSSEEEEEETTTTEEEEE
T ss_pred CCCEEEEEECCCCEEEEE
Confidence 777555554444556677
No 71
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.99 E-value=0.068 Score=55.19 Aligned_cols=133 Identities=10% Similarity=-0.018 Sum_probs=73.9
Q ss_pred eeEEEeCCCCCEEeCccCC--CcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEcc
Q 048136 101 HSVFYNVNTLQVTPLKVIT--DTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLA 178 (559)
Q Consensus 101 ~~~~yDp~t~~w~~~~~~~--~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~ 178 (559)
.+.+||..+++...+-..+ .....+.+..+||+.+++|+. + ..+++||.. +.+-.. . +........+. -.
T Consensus 126 tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~-D--g~v~iWd~~-~~~~~~--~-~~~h~~~v~~~-s~ 197 (420)
T 4gga_A 126 SVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTS-S--AEVQLWDVQ-QQKRLR--N-MTSHSARVGSL-SW 197 (420)
T ss_dssp EEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEET-T--SCEEEEETT-TTEEEE--E-ECCCSSCEEEE-EE
T ss_pred EEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEEC-C--CeEEEEEcC-CCcEEE--E-EeCCCCceEEE-ee
Confidence 3789999999887654332 222223456689999999987 3 579999987 554322 1 22222222222 33
Q ss_pred CCcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEecC--cEEEeeCCCCe
Q 048136 179 DGSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFANN--RSILLDPRANY 252 (559)
Q Consensus 179 dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg~--~~e~yDp~t~~ 252 (559)
++++++.|+.+. .+.++ .... ......+ .... ...-.....++|+.++.++. .+.+||..+++
T Consensus 198 ~~~~l~sgs~d~-~i~~~d~~~~----~~~~~~~-~~h~-----~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~ 263 (420)
T 4gga_A 198 NSYILSSGSRSG-HIHHHDVRVA----EHHVATL-SGHS-----QEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGE 263 (420)
T ss_dssp ETTEEEEEETTS-EEEEEETTSS----SCEEEEE-ECCS-----SCEEEEEECTTSSEEEEEETTSCEEEEESSCCS
T ss_pred CCCEEEEEeCCC-ceeEeeeccc----ceeeEEe-cccc-----cceeeeeecCCCCeeeeeeccccceEEeecccc
Confidence 789999888764 33344 2221 1111111 1110 01112334568888888764 56788877653
No 72
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.98 E-value=0.073 Score=52.24 Aligned_cols=140 Identities=11% Similarity=0.034 Sum_probs=67.8
Q ss_pred eEEEeCC-CCCEEeCccC-CCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCC-CCCeecCCCccccccccceEEEcc
Q 048136 102 SVFYNVN-TLQVTPLKVI-TDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCP-TCDWTEYPTALKDGRWYATQALLA 178 (559)
Q Consensus 102 ~~~yDp~-t~~w~~~~~~-~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~-t~~W~~~~~~m~~~R~y~s~~~L~ 178 (559)
..+||.. +++++.+... +.......++.+||+.+++++..+ ..+.+||... +.++..+.. +.....-...+.-+
T Consensus 17 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~--~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~ 93 (343)
T 1ri6_A 17 IHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPE--FRVLAYRIAPDDGALTFAAE-SALPGSLTHISTDH 93 (343)
T ss_dssp EEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTT--TEEEEEEECTTTCCEEEEEE-EECSSCCSEEEECT
T ss_pred EEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCC--CeEEEEEecCCCCceeeccc-cccCCCCcEEEEcC
Confidence 4566653 3444433221 111222344567898666665432 4677766430 456665432 33223334455667
Q ss_pred CCcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccc-eEEEeeCCc-EEEEe--cCcEEEeeCCC-Ce
Q 048136 179 DGSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYP-FVYLVPDGN-LYIFA--NNRSILLDPRA-NY 252 (559)
Q Consensus 179 dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp-~~~~l~~G~-iyv~G--g~~~e~yDp~t-~~ 252 (559)
||+.+++++.....+.+| ...+. .... ....... ..+ .+...++|+ ||+.+ ...+.+||..+ ++
T Consensus 94 dg~~l~~~~~~~~~i~~~d~~~~~--~~~~-~~~~~~~-------~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~ 163 (343)
T 1ri6_A 94 QGQFVFVGSYNAGNVSVTRLEDGL--PVGV-VDVVEGL-------DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGH 163 (343)
T ss_dssp TSSEEEEEETTTTEEEEEEEETTE--EEEE-EEEECCC-------TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSC
T ss_pred CCCEEEEEecCCCeEEEEECCCCc--cccc-cccccCC-------CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCc
Confidence 888555555444456666 32110 0111 1111100 111 133457886 66554 35688999887 55
Q ss_pred EE
Q 048136 253 VL 254 (559)
Q Consensus 253 W~ 254 (559)
..
T Consensus 164 ~~ 165 (343)
T 1ri6_A 164 LV 165 (343)
T ss_dssp EE
T ss_pred ee
Confidence 43
No 73
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.96 E-value=0.042 Score=54.76 Aligned_cols=231 Identities=11% Similarity=0.125 Sum_probs=118.9
Q ss_pred eEEEeCCCCCEEeCccCC--CcccccCeecCC--CcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccc-cccccceEEE
Q 048136 102 SVFYNVNTLQVTPLKVIT--DTWCSSGGLDVN--GNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALK-DGRWYATQAL 176 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~--~~~c~~~~~l~d--G~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~-~~R~y~s~~~ 176 (559)
..+||...+++..+.... ......-....+ ++++++|+. + ..+.+||.. +.+|..... +. ....-.+++.
T Consensus 35 i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~-d--g~v~iwd~~-~~~~~~~~~-~~~~~~~v~~~~~ 109 (379)
T 3jrp_A 35 IKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY-D--GKVLIWKEE-NGRWSQIAV-HAVHSASVNSVQW 109 (379)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET-T--SCEEEEEEE-TTEEEEEEE-ECCCSSCEEEEEE
T ss_pred EEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEecc-C--CEEEEEEcC-CCceeEeee-ecCCCcceEEEEe
Confidence 567887766665544332 211112223344 899999887 3 478999988 777765532 32 2223334555
Q ss_pred ccC--CcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEee-------------CCcEEEEec
Q 048136 177 LAD--GSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVP-------------DGNLYIFAN 240 (559)
Q Consensus 177 L~d--G~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~-------------~G~iyv~Gg 240 (559)
.++ ++.+++|+.++ .+.+| ..... ......+ .... ..-..+...+ ++++++.|+
T Consensus 110 ~~~~~~~~l~~~~~d~-~i~v~d~~~~~---~~~~~~~-~~~~-----~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 179 (379)
T 3jrp_A 110 APHEYGPLLLVASSDG-KVSVVEFKENG---TTSPIII-DAHA-----IGVNSASWAPATIEEDGEHNGTKESRKFVTGG 179 (379)
T ss_dssp CCGGGCSEEEEEETTS-EEEEEECCTTS---CCCEEEE-ECCT-----TCEEEEEECCCC----------CTTCEEEEEE
T ss_pred CCCCCCCEEEEecCCC-cEEEEecCCCC---ceeeEEe-cCCC-----CceEEEEEcCccccccccccCCCCCCEEEEEe
Confidence 666 88999988764 45566 33221 1111111 0000 0001112223 688888876
Q ss_pred C--cEEEeeCCCCe--EEEECCCCCCCCCcccCCCceeecccccccccccccC---cEEEEEcCCCCccccccccccccc
Q 048136 241 N--RSILLDPRANY--VLREYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVD---AEVLICGGSVPEAFYFGEVEKRLV 313 (559)
Q Consensus 241 ~--~~e~yDp~t~~--W~~~~p~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~---gkI~v~GG~~~~~~~~~~~~~~~~ 313 (559)
. .+.+||..++. +. ....+.. + .+....+... .+ ++++++|+.+
T Consensus 180 ~dg~i~i~d~~~~~~~~~-~~~~~~~----h--~~~v~~~~~s--------p~~~~~~~l~s~~~d-------------- 230 (379)
T 3jrp_A 180 ADNLVKIWKYNSDAQTYV-LESTLEG----H--SDWVRDVAWS--------PTVLLRSYLASVSQD-------------- 230 (379)
T ss_dssp TTSCEEEEEEETTTTEEE-EEEEECC----C--SSCEEEEEEC--------CCCSSSEEEEEEETT--------------
T ss_pred CCCeEEEEEecCCCccee-eEEEEec----c--cCcEeEEEEC--------CCCCCCCeEEEEeCC--------------
Confidence 3 57888876543 32 1111111 0 0111111111 14 7888888765
Q ss_pred cccCceEEEEecCCCCceeee--cC-CCCcccccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEE
Q 048136 314 PALDDCARMVVTSPDPVWTTE--KM-PTPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFT 390 (559)
Q Consensus 314 ~a~~s~~~~d~~~~~~~W~~~--~M-~~~R~~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt 390 (559)
..+..||+......+... .. .....-.+...-|||+.+++++.+ | .+.+||.... .+|.
T Consensus 231 ---g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d-g------------~i~iw~~~~~--~~~~ 292 (379)
T 3jrp_A 231 ---RTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGD-N------------KVTLWKENLE--GKWE 292 (379)
T ss_dssp ---SCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESS-S------------SEEEEEEEET--TEEE
T ss_pred ---CEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCC-C------------cEEEEeCCCC--Cccc
Confidence 235567776533333332 21 122222223456899999988764 2 5788987743 2787
Q ss_pred ecCC
Q 048136 391 ELAP 394 (559)
Q Consensus 391 ~~~~ 394 (559)
.+..
T Consensus 293 ~~~~ 296 (379)
T 3jrp_A 293 PAGE 296 (379)
T ss_dssp EEEE
T ss_pred cccc
Confidence 6543
No 74
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.94 E-value=0.099 Score=54.01 Aligned_cols=111 Identities=12% Similarity=0.041 Sum_probs=65.4
Q ss_pred CeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccc-cccccceEEEccCCcEEEEcCCCCCceeEE-cCCCCCC
Q 048136 126 GGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALK-DGRWYATQALLADGSFLIFGGRDSFSYEYI-PAERTEN 203 (559)
Q Consensus 126 ~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~-~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~ 203 (559)
..+-+++.++++|+. + ..+++||.. +.+.... +. +...-.+++..++|++++.|+.+. ++.+| ....
T Consensus 114 ~~~~p~~~~l~s~s~-D--g~i~vwd~~-~~~~~~~---l~~h~~~V~~v~~~~~~~~l~sgs~D~-~i~iwd~~~~--- 182 (410)
T 1vyh_C 114 VIFHPVFSVMVSASE-D--ATIKVWDYE-TGDFERT---LKGHTDSVQDISFDHSGKLLASCSADM-TIKLWDFQGF--- 182 (410)
T ss_dssp EEECSSSSEEEEEES-S--SCEEEEETT-TCCCCEE---ECCCSSCEEEEEECTTSSEEEEEETTS-CCCEEETTSS---
T ss_pred EEEcCCCCEEEEEeC-C--CeEEEEECC-CCcEEEE---EeccCCcEEEEEEcCCCCEEEEEeCCC-eEEEEeCCCC---
Confidence 345678999999987 3 579999987 5543221 22 122233455567899999998764 45666 3322
Q ss_pred CcceeccccccccccccCCccceEEEeeCCcEEEEecC--cEEEeeCCCCeEEE
Q 048136 204 AYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFANN--RSILLDPRANYVLR 255 (559)
Q Consensus 204 ~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg~--~~e~yDp~t~~W~~ 255 (559)
.....+ .... ..-..+...++|+.++.|+. .+.+||..++.-.+
T Consensus 183 --~~~~~~-~~h~-----~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~ 228 (410)
T 1vyh_C 183 --ECIRTM-HGHD-----HNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVK 228 (410)
T ss_dssp --CEEECC-CCCS-----SCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred --ceeEEE-cCCC-----CCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 111111 1110 01112334568888888864 57889998876543
No 75
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.93 E-value=0.18 Score=51.04 Aligned_cols=227 Identities=12% Similarity=0.100 Sum_probs=106.3
Q ss_pred CeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCC-cc-ccccccceEEEccCCcEEEEcCCCCCceeEE-cCCCCC
Q 048136 126 GGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPT-AL-KDGRWYATQALLADGSFLIFGGRDSFSYEYI-PAERTE 202 (559)
Q Consensus 126 ~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~-~m-~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~ 202 (559)
.+..+|+++++.+. + .++++||.. +.+-..... .. .+...-.+++..+||+.++.|+.++ .+.+| ..++
T Consensus 100 ~~~s~d~~~l~~s~--d--g~v~lWd~~-~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg-~v~iwd~~~~-- 171 (357)
T 4g56_B 100 VAWVSEKGILVASD--S--GAVELWEIL-EKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDF-SVKVWDLSQK-- 171 (357)
T ss_dssp EEEETTTEEEEEET--T--SCEEEC---------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTS-CEEEEETTTT--
T ss_pred EEEcCCCCEEEEEC--C--CEEEEeecc-ccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCC-eEEEEECCCC--
Confidence 34567888776544 2 479999987 544222111 01 1222334566678999999998764 46677 4432
Q ss_pred CCcceeccccccccccccCCccceEEEeeCC-cEEEEec--CcEEEeeCCCCeEEEECCCCCCCCCcccCCCceeecccc
Q 048136 203 NAYSIPFQFLRDTYDVLENNLYPFVYLVPDG-NLYIFAN--NRSILLDPRANYVLREYPPLPGGARNYPSTSTSVLLPLK 279 (559)
Q Consensus 203 ~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G-~iyv~Gg--~~~e~yDp~t~~W~~~~p~mp~~~~~~p~~g~~v~lpl~ 279 (559)
.....+ ....+ .--.+...+++ .+++.++ ..+.+||.++.+-.. .+....... .-.++.. .
T Consensus 172 ---~~~~~~-~~h~~-----~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~---~~~~~~~~~--~v~~v~~--s 235 (357)
T 4g56_B 172 ---AVLKSY-NAHSS-----EVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPAT---RIDFCASDT--IPTSVTW--H 235 (357)
T ss_dssp ---EEEEEE-CCCSS-----CEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBC---BCCCTTCCS--CEEEEEE--C
T ss_pred ---cEEEEE-cCCCC-----CEEEEEEccCCCceeeeeccCCceEEEECCCCceee---eeeeccccc--cccchhh--h
Confidence 111111 11100 11112223455 4666665 357889998775331 111100000 0112211 1
Q ss_pred cccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeeecCCCCcccccEEEeeCC-eEEEEcC
Q 048136 280 LYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTEKMPTPRVMSDGVLLPTG-DVLLING 358 (559)
Q Consensus 280 ~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~R~~~~av~LpdG-~V~vvGG 358 (559)
| .+++++++|+.+ ..+..+|+....... ........... ...-|+| ++++.|+
T Consensus 236 p-------~~~~~la~g~~d-----------------~~i~~wd~~~~~~~~-~~~~~~~~v~~-l~~sp~~~~~lasgs 289 (357)
T 4g56_B 236 P-------EKDDTFACGDET-----------------GNVSLVNIKNPDSAQ-TSAVHSQNITG-LAYSYHSSPFLASIS 289 (357)
T ss_dssp T-------TSTTEEEEEESS-----------------SCEEEEESSCGGGCE-EECCCSSCEEE-EEECSSSSCCEEEEE
T ss_pred h-------cccceEEEeecc-----------------cceeEEECCCCcEeE-EEeccceeEEE-EEEcCCCCCEEEEEe
Confidence 1 256788888754 234456654311110 11212222222 2234676 5677776
Q ss_pred cCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCccceeeeEECC-CCceEEeCCCCC
Q 048136 359 AELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANLLP-DGRVFVGGSNDN 421 (559)
Q Consensus 359 ~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~llp-dG~Vlv~GG~~~ 421 (559)
.+ + ++.+||.++. +-...-.. .... .....-| |+++|+.||.+.
T Consensus 290 ~D-~------------~i~iwd~~~~---~~~~~~~H-~~~V--~~vafsP~d~~~l~s~s~Dg 334 (357)
T 4g56_B 290 ED-C------------TVAVLDADFS---EVFRDLSH-RDFV--TGVAWSPLDHSKFTTVGWDH 334 (357)
T ss_dssp TT-S------------CEEEECTTSC---EEEEECCC-SSCE--EEEEECSSSTTEEEEEETTS
T ss_pred CC-C------------EEEEEECCCC---cEeEECCC-CCCE--EEEEEeCCCCCEEEEEcCCC
Confidence 54 1 6789998876 43322111 1111 1233456 899999998643
No 76
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=96.92 E-value=0.24 Score=48.60 Aligned_cols=139 Identities=10% Similarity=0.027 Sum_probs=72.9
Q ss_pred eEEEeCCCCCE-EeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCC
Q 048136 102 SVFYNVNTLQV-TPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADG 180 (559)
Q Consensus 102 ~~~yDp~t~~w-~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG 180 (559)
...||+.+++. ..........+.+.++.+||+.++++....+...+.+||.. +.+.... +.........+.-+||
T Consensus 64 i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~-~~~~~~~---~~~~~~~~~~~~spdg 139 (331)
T 3u4y_A 64 LVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFL-KNKFIST---IPIPYDAVGIAISPNG 139 (331)
T ss_dssp EEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETT-TTEEEEE---EECCTTEEEEEECTTS
T ss_pred EEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECC-CCCeEEE---EECCCCccceEECCCC
Confidence 67899988875 22211222223224566889866654432122389999998 6654332 2222223456677788
Q ss_pred c-EEEEcCCCCCceeEE-cCCCCCCCccee-ccccccccccccCCccce-EEEeeCCc-EEEEec--CcEEEeeCCCCeE
Q 048136 181 S-FLIFGGRDSFSYEYI-PAERTENAYSIP-FQFLRDTYDVLENNLYPF-VYLVPDGN-LYIFAN--NRSILLDPRANYV 253 (559)
Q Consensus 181 ~-VyvvGG~~~~s~E~y-P~~~~~~~w~~~-~p~l~~~~d~~~~~~yp~-~~~l~~G~-iyv~Gg--~~~e~yDp~t~~W 253 (559)
+ +|+.+..+...+.+| -..+. .-... ...+. ....+. ....+||+ +|+.+. ..+.+||..+++.
T Consensus 140 ~~l~~~~~~~~~~i~~~~~~~~g--~~~~~~~~~~~-------~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 140 NGLILIDRSSANTVRRFKIDADG--VLFDTGQEFIS-------GGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN 210 (331)
T ss_dssp SCEEEEEETTTTEEEEEEECTTC--CEEEEEEEEEC-------SSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS
T ss_pred CEEEEEecCCCceEEEEEECCCC--cEeecCCcccc-------CCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc
Confidence 6 666654433226666 22210 00000 00000 011222 34457897 777653 5688999988765
No 77
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.92 E-value=0.049 Score=54.30 Aligned_cols=141 Identities=11% Similarity=0.084 Sum_probs=69.5
Q ss_pred eEEEeCCCCCEEeCccC--CCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCcccc------c----c
Q 048136 102 SVFYNVNTLQVTPLKVI--TDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKD------G----R 169 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~--~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~------~----R 169 (559)
..+||..+++++.+... ........++.+||+.+++.+.. ...+.+||.....+...+.. +.. . .
T Consensus 65 v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~--~~~v~v~~~~~~g~~~~~~~-~~~~~~~p~~~~~~~ 141 (347)
T 3hfq_A 65 IAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYH--KGTAEVMKIAADGALTLTDT-VQHSGHGPRPEQDGS 141 (347)
T ss_dssp EEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETT--TTEEEEEEECTTSCEEEEEE-EECCCCCSSTTCSSC
T ss_pred EEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCC--CCEEEEEEeCCCCCeeecce-eecCCCCCCccccCC
Confidence 67888888887765532 11122234556899865555532 25788888641233332211 111 1 1
Q ss_pred ccceEEEccCCcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccc-eEEEeeCCc-EEEEec--CcEE
Q 048136 170 WYATQALLADGSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYP-FVYLVPDGN-LYIFAN--NRSI 244 (559)
Q Consensus 170 ~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp-~~~~l~~G~-iyv~Gg--~~~e 244 (559)
.-+.++.-+||++|+.+.. ...+.+| ...+ ........+... ....| ++...+||+ ||+.+. ..+.
T Consensus 142 ~~~~~~~spdg~l~v~~~~-~~~v~~~~~~~~--g~~~~~~~~~~~------~g~~p~~~~~spdg~~l~v~~~~~~~v~ 212 (347)
T 3hfq_A 142 HIHYTDLTPDNRLAVIDLG-SDKVYVYNVSDA--GQLSEQSVLTME------AGFGPRHLVFSPDGQYAFLAGELSSQIA 212 (347)
T ss_dssp CEEEEEECTTSCEEEEETT-TTEEEEEEECTT--SCEEEEEEEECC------TTCCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred CceEEEECCCCcEEEEeCC-CCEEEEEEECCC--CcEEEeeeEEcC------CCCCCceEEECCCCCEEEEEeCCCCEEE
Confidence 2234667789997766543 3456677 4321 011111111000 01122 234567998 676543 4556
Q ss_pred EeeCC--CCeEE
Q 048136 245 LLDPR--ANYVL 254 (559)
Q Consensus 245 ~yDp~--t~~W~ 254 (559)
+||.. ++++.
T Consensus 213 v~~~~~~~g~~~ 224 (347)
T 3hfq_A 213 SLKYDTQTGAFT 224 (347)
T ss_dssp EEEEETTTTEEE
T ss_pred EEEecCCCCceE
Confidence 66654 46553
No 78
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=96.92 E-value=0.2 Score=50.75 Aligned_cols=139 Identities=10% Similarity=0.064 Sum_probs=68.3
Q ss_pred eEEEeCCC----C-CEEeCccCCCcccccCeecCC-CcEEEEcCCCCCCCeEEEEeCCCCCC------e-ecCCCccccc
Q 048136 102 SVFYNVNT----L-QVTPLKVITDTWCSSGGLDVN-GNLISTGGFLGGSRTTRYLWGCPTCD------W-TEYPTALKDG 168 (559)
Q Consensus 102 ~~~yDp~t----~-~w~~~~~~~~~~c~~~~~l~d-G~i~v~GG~~~g~~~v~~ydp~~t~~------W-~~~~~~m~~~ 168 (559)
..+||..+ . ....+. .+..........++ ++++++|+.. ..+++||.. +.+ - ..........
T Consensus 91 v~vw~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s~~~d---g~v~iwd~~-~~~~~~~~~~~~~~~~~~~~~ 165 (416)
T 2pm9_A 91 LELYSTNEANNAINSMARFS-NHSSSVKTVKFNAKQDNVLASGGNN---GEIFIWDMN-KCTESPSNYTPLTPGQSMSSV 165 (416)
T ss_dssp EEEECCSSTTSCCCEEEECC-CSSSCCCEEEECSSSTTBEEEECSS---SCEEBCBTT-TTSSCTTTCCCBCCCCSCCSS
T ss_pred EEEeecccccccccchhhcc-CCccceEEEEEcCCCCCEEEEEcCC---CeEEEEECC-CCccccccccccccccccCCC
Confidence 57788776 1 222222 12222223344566 8899998862 578999987 443 1 1111101122
Q ss_pred cccceEEEccC-CcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCC-cEEEEecC----
Q 048136 169 RWYATQALLAD-GSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDG-NLYIFANN---- 241 (559)
Q Consensus 169 R~y~s~~~L~d-G~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G-~iyv~Gg~---- 241 (559)
..-.+++..++ +++++.|+.++ .+.+| ..+.+ ............. ....-..+...++| ++++.++.
T Consensus 166 ~~v~~~~~~~~~~~~l~~~~~dg-~v~iwd~~~~~---~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~d~~~ 239 (416)
T 2pm9_A 166 DEVISLAWNQSLAHVFASAGSSN-FASIWDLKAKK---EVIHLSYTSPNSG--IKQQLSVVEWHPKNSTRVATATGSDND 239 (416)
T ss_dssp CCCCEEEECSSCTTEEEEESSSS-CEEEEETTTTE---EEEEECCCCCSSC--CCCCEEEEEECSSCTTEEEEEECCSSS
T ss_pred CCeeEEEeCCCCCcEEEEEcCCC-CEEEEECCCCC---cceEEeccccccc--cCCceEEEEECCCCCCEEEEEECCCCC
Confidence 23345556666 78888888764 46666 43321 1111111000000 00011123344566 57776653
Q ss_pred -cEEEeeCCCC
Q 048136 242 -RSILLDPRAN 251 (559)
Q Consensus 242 -~~e~yDp~t~ 251 (559)
.+.+||.++.
T Consensus 240 ~~i~~~d~~~~ 250 (416)
T 2pm9_A 240 PSILIWDLRNA 250 (416)
T ss_dssp CCCCEEETTST
T ss_pred ceEEEEeCCCC
Confidence 6788998875
No 79
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=96.92 E-value=0.21 Score=48.77 Aligned_cols=235 Identities=10% Similarity=0.124 Sum_probs=112.4
Q ss_pred eEEEeCCCCCEEeCccC--CCcccccCeecC--CCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccc-cccccceEEE
Q 048136 102 SVFYNVNTLQVTPLKVI--TDTWCSSGGLDV--NGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALK-DGRWYATQAL 176 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~--~~~~c~~~~~l~--dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~-~~R~y~s~~~ 176 (559)
+.+||..+++.+.+..+ |...-....+.. +|++++.|+. | .++++||.. +.+|..+.. +. +...-.+++.
T Consensus 33 v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~-D--~~v~iWd~~-~~~~~~~~~-~~~h~~~v~~v~~ 107 (297)
T 2pm7_B 33 IKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY-D--GKVMIWKEE-NGRWSQIAV-HAVHSASVNSVQW 107 (297)
T ss_dssp EEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEET-T--TEEEEEEBS-SSCBCCCEE-ECCCSSCEEEEEE
T ss_pred EEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcC-C--CEEEEEEcC-CCceEEEEE-eecCCCceeEEEe
Confidence 57788765544333222 111111111222 4889999987 3 589999998 777765432 22 1122223444
Q ss_pred ccC--CcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEee-------------CCcEEEEec
Q 048136 177 LAD--GSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVP-------------DGNLYIFAN 240 (559)
Q Consensus 177 L~d--G~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~-------------~G~iyv~Gg 240 (559)
.++ |+++++|+.++ .+.+| ...+. .+.. . .+..... .. ..+...+ ++++++.|+
T Consensus 108 ~p~~~g~~l~s~s~d~-~v~~wd~~~~~--~~~~-~-~~~~h~~----~v-~~~~~~p~~~~~~~~~~~~~~~~~l~sgs 177 (297)
T 2pm7_B 108 APHEYGPMLLVASSDG-KVSVVEFKENG--TTSP-I-IIDAHAI----GV-NSASWAPATIEEDGEHNGTKESRKFVTGG 177 (297)
T ss_dssp CCGGGCSEEEEEETTS-EEEEEEBCSSS--CBCC-E-EEECCSS----CE-EEEEECCCC------------CCEEEEEE
T ss_pred CcCCCCcEEEEEECCC-cEEEEEecCCC--ceee-e-eeecccC----cc-ceEeecCCcccccccCCCCCCcceEEEEc
Confidence 444 78888888764 45666 33321 1110 0 0010000 00 0011112 367888876
Q ss_pred --CcEEEeeCCCCe--EEEECCCCCCCCCcccCCCceeecccccccccccccCcEEEEEcCCCCcccccccccccccccc
Q 048136 241 --NRSILLDPRANY--VLREYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPAL 316 (559)
Q Consensus 241 --~~~e~yDp~t~~--W~~~~p~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~ 316 (559)
..+.+||..++. +. ....+.+. .+....+...|. ...+++++.|+.+
T Consensus 178 ~D~~v~lwd~~~~~~~~~-~~~~l~~H------~~~V~~v~~sp~-----~~~~~~las~s~D----------------- 228 (297)
T 2pm7_B 178 ADNLVKIWKYNSDAQTYV-LESTLEGH------SDWVRDVAWSPT-----VLLRSYMASVSQD----------------- 228 (297)
T ss_dssp TTSCEEEEEEETTTTEEE-EEEEECCC------SSCEEEEEECCC-----CSSSEEEEEEETT-----------------
T ss_pred CCCcEEEEEEcCCCceEE-EEEEecCC------CCceEEEEECCC-----CCCceEEEEEECC-----------------
Confidence 357888876543 32 11112211 111111111110 0125788888765
Q ss_pred CceEEEEecCCCCceeeecC---CCCcccccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecC
Q 048136 317 DDCARMVVTSPDPVWTTEKM---PTPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELA 393 (559)
Q Consensus 317 ~s~~~~d~~~~~~~W~~~~M---~~~R~~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~ 393 (559)
.++..+|+......|....+ .....-.....-|||++++.||.+ + .+.+|+...+ | .|..+.
T Consensus 229 ~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D-~------------~v~lw~~~~~-g-~w~~~~ 293 (297)
T 2pm7_B 229 RTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGD-N------------KVTLWKENLE-G-KWEPAG 293 (297)
T ss_dssp SCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETT-S------------CEEEEEECTT-S-CEEEC-
T ss_pred CcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCC-C------------cEEEEEECCC-C-cEEecc
Confidence 24556676543344554322 111111113345899999998865 1 5789987643 2 788765
Q ss_pred CC
Q 048136 394 PS 395 (559)
Q Consensus 394 ~~ 395 (559)
.+
T Consensus 294 ~~ 295 (297)
T 2pm7_B 294 EV 295 (297)
T ss_dssp --
T ss_pred cc
Confidence 43
No 80
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=96.90 E-value=0.2 Score=48.30 Aligned_cols=219 Identities=11% Similarity=0.164 Sum_probs=107.3
Q ss_pred ecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCcc--ccccccc-eEEE-ccCCcEEEEcCCCCCceeEEcCCCCCC
Q 048136 128 LDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTAL--KDGRWYA-TQAL-LADGSFLIFGGRDSFSYEYIPAERTEN 203 (559)
Q Consensus 128 ~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m--~~~R~y~-s~~~-L~dG~VyvvGG~~~~s~E~yP~~~~~~ 203 (559)
+..+|++|+.... ...+.+||+. ..........- ...-..+ +.+. -.+|++||.+......+.+|..+++
T Consensus 37 ~~~~g~l~v~~~~---~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g~-- 110 (286)
T 1q7f_A 37 VNAQNDIIVADTN---NHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQ-- 110 (286)
T ss_dssp ECTTCCEEEEEGG---GTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTTSC--
T ss_pred ECCCCCEEEEECC---CCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEECCCCc--
Confidence 3468899988643 2578899987 44322221100 0011123 3333 2589999987432234555632221
Q ss_pred CcceeccccccccccccCCccce-EEEeeCCcEEEEec--CcEEEeeCCCCeEEEECCCCCCCCCcccCCCceeeccccc
Q 048136 204 AYSIPFQFLRDTYDVLENNLYPF-VYLVPDGNLYIFAN--NRSILLDPRANYVLREYPPLPGGARNYPSTSTSVLLPLKL 280 (559)
Q Consensus 204 ~w~~~~p~l~~~~d~~~~~~yp~-~~~l~~G~iyv~Gg--~~~e~yDp~t~~W~~~~p~mp~~~~~~p~~g~~v~lpl~~ 280 (559)
....... . ....|. +.+.++|+||+... ..+.+||+...... .+.. +. ....| .++.+.
T Consensus 111 -~~~~~~~--~------~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~-~~~~-~~-~~~~p---~~i~~~--- 172 (286)
T 1q7f_A 111 -FVRKFGA--T------ILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLH-KFGC-SK-HLEFP---NGVVVN--- 172 (286)
T ss_dssp -EEEEECT--T------TCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEE-EEEC-TT-TCSSE---EEEEEC---
T ss_pred -EEEEecC--c------cCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEE-EeCC-CC-ccCCc---EEEEEC---
Confidence 1111110 0 011233 33456899998853 56889998765433 2321 10 11122 222221
Q ss_pred ccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeee-c----CCCCcccccEEEeeCCeEEE
Q 048136 281 YRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTE-K----MPTPRVMSDGVLLPTGDVLL 355 (559)
Q Consensus 281 ~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~----M~~~R~~~~av~LpdG~V~v 355 (559)
.+++||+....+ ..+.+||+.. ..... . +..++ ..++-++|+|||
T Consensus 173 -------~~g~l~v~~~~~-----------------~~i~~~~~~g---~~~~~~~~~g~~~~p~---~i~~d~~G~l~v 222 (286)
T 1q7f_A 173 -------DKQEIFISDNRA-----------------HCVKVFNYEG---QYLRQIGGEGITNYPI---GVGINSNGEILI 222 (286)
T ss_dssp -------SSSEEEEEEGGG-----------------TEEEEEETTC---CEEEEESCTTTSCSEE---EEEECTTCCEEE
T ss_pred -------CCCCEEEEECCC-----------------CEEEEEcCCC---CEEEEEccCCccCCCc---EEEECCCCCEEE
Confidence 268888875422 2345566532 22111 1 22221 123447999999
Q ss_pred EcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecC-CCCCCccceeeeEECCCCceEEeC
Q 048136 356 INGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELA-PSDIPRMYHSVANLLPDGRVFVGG 417 (559)
Q Consensus 356 vGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~-~~~~~R~yhs~a~llpdG~Vlv~G 417 (559)
...... ..+.+||++.. ....+. .....+ -++ ..+.+||++||+.
T Consensus 223 ~~~~~~------------~~i~~~~~~g~---~~~~~~~~~~~~~-~~~-i~~~~~g~l~vs~ 268 (286)
T 1q7f_A 223 ADNHNN------------FNLTIFTQDGQ---LISALESKVKHAQ-CFD-VALMDDGSVVLAS 268 (286)
T ss_dssp EECSSS------------CEEEEECTTSC---EEEEEEESSCCSC-EEE-EEEETTTEEEEEE
T ss_pred EeCCCC------------EEEEEECCCCC---EEEEEcccCCCCc-cee-EEECCCCcEEEEC
Confidence 864321 15789998654 333322 111111 122 4456899999984
No 81
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.89 E-value=0.018 Score=65.02 Aligned_cols=240 Identities=13% Similarity=0.037 Sum_probs=120.8
Q ss_pred cCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccc-cceEEEccC--CcEEEEcCCCCCceeEE-cCCCCCCC
Q 048136 129 DVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRW-YATQALLAD--GSFLIFGGRDSFSYEYI-PAERTENA 204 (559)
Q Consensus 129 l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~-y~s~~~L~d--G~VyvvGG~~~~s~E~y-P~~~~~~~ 204 (559)
-+||+.+++||. + ..+.+||.. ..++..... +...+. -.+++..++ |+.++.|+.++ .+.+| ..++ .
T Consensus 18 s~dg~~latg~~-d--g~I~vwd~~-~~~~~~~~~-l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg-~I~vwd~~~~---~ 88 (753)
T 3jro_A 18 DYYGKRLATCSS-D--KTIKIFEVE-GETHKLIDT-LTGHEGPVWRVDWAHPKFGTILASCSYDG-KVLIWKEENG---R 88 (753)
T ss_dssp CSSSCCEEEEET-T--TEEEEEEEE-TTEEEEEEE-ECCCSSCEEEEEECCTTSCSEEEEEETTS-CEEEEEEETT---E
T ss_pred CCCCCeEEEEEC-C--CcEEEEecC-CCCCcccee-ccCCcCceEEEEecCCCCCCEEEEEeCCC-eEEEEECCCC---c
Confidence 357888888886 3 578899987 666665432 332222 223333455 88999998764 45666 4332 1
Q ss_pred cceeccccccccccccCCccceEEEeeC--CcEEEEecC--cEEEeeCCCCeEEEECCCCCCCCCcccCCCceeeccccc
Q 048136 205 YSIPFQFLRDTYDVLENNLYPFVYLVPD--GNLYIFANN--RSILLDPRANYVLREYPPLPGGARNYPSTSTSVLLPLKL 280 (559)
Q Consensus 205 w~~~~p~l~~~~d~~~~~~yp~~~~l~~--G~iyv~Gg~--~~e~yDp~t~~W~~~~p~mp~~~~~~p~~g~~v~lpl~~ 280 (559)
+.....+. ... ..-..+...++ |+++++|+. .+.+||..++.-.... .+.. .+ +....+...+
T Consensus 89 ~~~~~~~~-~h~-----~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~-~~~~----~~--~~v~~l~~~p 155 (753)
T 3jro_A 89 WSQIAVHA-VHS-----ASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPI-IIDA----HA--IGVNSASWAP 155 (753)
T ss_dssp EEEEEEEC-CCS-----SCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCE-EEEC----CS--SCEEEEEECC
T ss_pred cccccccc-CCC-----CCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCccee-Eeec----CC--CceEEEEecC
Confidence 22211111 100 01112233456 888888874 5788998766211000 0000 00 1111111110
Q ss_pred cc-----ccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeee-cCC--CCcccccEEEeeC--
Q 048136 281 YR-----DYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTE-KMP--TPRVMSDGVLLPT-- 350 (559)
Q Consensus 281 ~~-----~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~--~~R~~~~av~Lpd-- 350 (559)
.. ......+++++++|+.+ ..+..+|+......+... .+. ...... ...-|+
T Consensus 156 ~~~~~~~~~~~~~d~~~l~sgs~d-----------------g~I~iwd~~~~~~~~~~~~~~~~h~~~V~~-l~~sp~~~ 217 (753)
T 3jro_A 156 ATIEEDGEHNGTKESRKFVTGGAD-----------------NLVKIWKYNSDAQTYVLESTLEGHSDWVRD-VAWSPTVL 217 (753)
T ss_dssp CC---------CGGGCCEEEEETT-----------------SCEEEEEEETTTTEEEEEEEECCCSSCEEE-EEECCCCS
T ss_pred cccccccccccCCCCCEEEEEECC-----------------CeEEEEeccCCcccceeeeeecCCCCcEEE-EEeccCCC
Confidence 00 00000146777777754 245667776544445543 332 222322 345678
Q ss_pred -CeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCccceeeeEECCCCceEEeCCCCC
Q 048136 351 -GDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANLLPDGRVFVGGSNDN 421 (559)
Q Consensus 351 -G~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~llpdG~Vlv~GG~~~ 421 (559)
|+++++||.+ | .+.+||..+.....-..+.........-......|||+.+++||.+.
T Consensus 218 ~~~~l~s~s~D-g------------~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg 276 (753)
T 3jro_A 218 LRSYLASVSQD-R------------TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDN 276 (753)
T ss_dssp SSEEEEEEESS-S------------CEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSS
T ss_pred CCCEEEEEecC-C------------EEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCC
Confidence 8999998865 2 57899988752211111111111111112345679999999998643
No 82
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=96.88 E-value=0.21 Score=53.44 Aligned_cols=250 Identities=8% Similarity=-0.042 Sum_probs=124.3
Q ss_pred eEEEeCCCC----C-EEeCccCCCcc-cccCeecC--CCcEEEEcCCCCCCCeEEEEeCCCCC------CeecCCCccc-
Q 048136 102 SVFYNVNTL----Q-VTPLKVITDTW-CSSGGLDV--NGNLISTGGFLGGSRTTRYLWGCPTC------DWTEYPTALK- 166 (559)
Q Consensus 102 ~~~yDp~t~----~-w~~~~~~~~~~-c~~~~~l~--dG~i~v~GG~~~g~~~v~~ydp~~t~------~W~~~~~~m~- 166 (559)
..+||..+. + ...+. .+... -......+ ||+++++|+. + ..+++||.. +. +...... +.
T Consensus 41 v~v~~~~~~~~~~~~~~~~~-~h~~~~v~~~~~sp~~~~~~l~s~~~-d--g~v~vw~~~-~~~~~~~~~~~~~~~-~~~ 114 (615)
T 1pgu_A 41 AFVRCLDDGDSKVPPVVQFT-GHGSSVVTTVKFSPIKGSQYLCSGDE-S--GKVIVWGWT-FDKESNSVEVNVKSE-FQV 114 (615)
T ss_dssp EEEEECCSSCCSSCSEEEEC-TTTTSCEEEEEECSSTTCCEEEEEET-T--SEEEEEEEE-EEGGGTEEEEEEEEE-EEC
T ss_pred EEEEECCCCCCccccceEEe-cCCCceEEEEEECcCCCCCEEEEecC-C--CEEEEEeCC-CCcccccccccccch-hhc
Confidence 567887765 2 22221 12222 22345667 9999999986 3 478888875 33 2222211 22
Q ss_pred cccccceEEEccCCcEEEEcCCCCC-ceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCc-EEEEec--C
Q 048136 167 DGRWYATQALLADGSFLIFGGRDSF-SYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGN-LYIFAN--N 241 (559)
Q Consensus 167 ~~R~y~s~~~L~dG~VyvvGG~~~~-s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~-iyv~Gg--~ 241 (559)
....-.+++..+||+.+++++.+.. ...++ -..+ .....+ .... ..-..+...++|+ +++.|+ .
T Consensus 115 ~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~-----~~~~~~-~~~~-----~~v~~~~~~~~~~~~l~~~~~d~ 183 (615)
T 1pgu_A 115 LAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSG-----NSLGEV-SGHS-----QRINACHLKQSRPMRSMTVGDDG 183 (615)
T ss_dssp CSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTC-----CEEEEC-CSCS-----SCEEEEEECSSSSCEEEEEETTT
T ss_pred ccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECC-----Ccceee-ecCC-----ccEEEEEECCCCCcEEEEEeCCC
Confidence 2233345566779999998886531 12333 1121 111111 1110 0111233456776 676665 4
Q ss_pred cEEEeeCCCCeEEEECCCCCCCCCcccCCC-ceeecccccccccccccC-cEEEEEcCCCCccccccccccccccccCce
Q 048136 242 RSILLDPRANYVLREYPPLPGGARNYPSTS-TSVLLPLKLYRDYYARVD-AEVLICGGSVPEAFYFGEVEKRLVPALDDC 319 (559)
Q Consensus 242 ~~e~yDp~t~~W~~~~p~mp~~~~~~p~~g-~~v~lpl~~~~~~~~~~~-gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~ 319 (559)
.+.+||..+.+-...+..-. . .+ ....+... .+ ++.+++|+.+. .+
T Consensus 184 ~v~vwd~~~~~~~~~~~~~~---~----~~~~v~~~~~~--------~~~~~~l~~~~~dg-----------------~i 231 (615)
T 1pgu_A 184 SVVFYQGPPFKFSASDRTHH---K----QGSFVRDVEFS--------PDSGEFVITVGSDR-----------------KI 231 (615)
T ss_dssp EEEEEETTTBEEEEEECSSS---C----TTCCEEEEEEC--------STTCCEEEEEETTC-----------------CE
T ss_pred cEEEEeCCCcceeeeecccC---C----CCceEEEEEEC--------CCCCCEEEEEeCCC-----------------eE
Confidence 68899988876554332100 0 00 11111111 25 78888887642 34
Q ss_pred EEEEecCCCCceeeecC-----C-CCcccccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEe-c
Q 048136 320 ARMVVTSPDPVWTTEKM-----P-TPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTE-L 392 (559)
Q Consensus 320 ~~~d~~~~~~~W~~~~M-----~-~~R~~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~-~ 392 (559)
..+|+.. .+... .+ . ...... .... +++.+++++.+ + .+.+||..+. +-.. +
T Consensus 232 ~vwd~~~--~~~~~-~~~~~~~~~~~~v~~-~~~~-~~~~l~~~~~d-~------------~i~~wd~~~~---~~~~~~ 290 (615)
T 1pgu_A 232 SCFDGKS--GEFLK-YIEDDQEPVQGGIFA-LSWL-DSQKFATVGAD-A------------TIRVWDVTTS---KCVQKW 290 (615)
T ss_dssp EEEETTT--CCEEE-ECCBTTBCCCSCEEE-EEES-SSSEEEEEETT-S------------EEEEEETTTT---EEEEEE
T ss_pred EEEECCC--CCEeE-EecccccccCCceEE-EEEc-CCCEEEEEcCC-C------------cEEEEECCCC---cEEEEE
Confidence 4555542 11111 22 1 112222 2233 89999988764 1 6789999876 4332 1
Q ss_pred CCCCCCccceeeeEECCCCceEEeCCCCC
Q 048136 393 APSDIPRMYHSVANLLPDGRVFVGGSNDN 421 (559)
Q Consensus 393 ~~~~~~R~yhs~a~llpdG~Vlv~GG~~~ 421 (559)
.....+......++..++++.+++|+...
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~g 319 (615)
T 1pgu_A 291 TLDKQQLGNQQVGVVATGNGRIISLSLDG 319 (615)
T ss_dssp ECCTTCGGGCEEEEEEEETTEEEEEETTS
T ss_pred cCCCCcccCceeEEEeCCCCeEEEEECCC
Confidence 11111111222344456898888888654
No 83
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.87 E-value=0.041 Score=54.92 Aligned_cols=111 Identities=11% Similarity=0.065 Sum_probs=63.9
Q ss_pred eecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCcccc-ccccceEEEccCCcEEEEcCCCCCceeEE-cCCCCCCC
Q 048136 127 GLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKD-GRWYATQALLADGSFLIFGGRDSFSYEYI-PAERTENA 204 (559)
Q Consensus 127 ~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~-~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~ 204 (559)
.+.+||+++++|+.. ..+++||.. +.+|..... +.. ...-.+++..++|+.+++|+.++ .+.+| ...+ .
T Consensus 15 ~~s~~~~~l~~~~~d---~~v~i~~~~-~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~~~~~dg-~i~vwd~~~~---~ 85 (372)
T 1k8k_C 15 AWNKDRTQIAICPNN---HEVHIYEKS-GNKWVQVHE-LKEHNGQVTGVDWAPDSNRIVTCGTDR-NAYVWTLKGR---T 85 (372)
T ss_dssp EECTTSSEEEEECSS---SEEEEEEEE-TTEEEEEEE-EECCSSCEEEEEEETTTTEEEEEETTS-CEEEEEEETT---E
T ss_pred EECCCCCEEEEEeCC---CEEEEEeCC-CCcEEeeee-ecCCCCcccEEEEeCCCCEEEEEcCCC-eEEEEECCCC---e
Confidence 345789999998762 589999988 776655432 432 22233455567899999988764 45666 3332 1
Q ss_pred cceeccccccccccccCCccceEEEeeCCcEEEEecC--cEEEeeCCCCe
Q 048136 205 YSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFANN--RSILLDPRANY 252 (559)
Q Consensus 205 w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg~--~~e~yDp~t~~ 252 (559)
+.....+.... ..-..+...++|++++.|+. .+.+||..+..
T Consensus 86 ~~~~~~~~~~~------~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~ 129 (372)
T 1k8k_C 86 WKPTLVILRIN------RAARCVRWAPNEKKFAVGSGSRVISICYFEQEN 129 (372)
T ss_dssp EEEEEECCCCS------SCEEEEEECTTSSEEEEEETTSSEEEEEEETTT
T ss_pred eeeeEEeecCC------CceeEEEECCCCCEEEEEeCCCEEEEEEecCCC
Confidence 21111111100 01112334468888888763 57778876653
No 84
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=96.85 E-value=0.24 Score=58.57 Aligned_cols=254 Identities=11% Similarity=0.047 Sum_probs=127.5
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccc-cccccceEEEcc--
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALK-DGRWYATQALLA-- 178 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~-~~R~y~s~~~L~-- 178 (559)
..+||..+++....-..+.....+.++.+||+.+++|+. + ..+.+||.. +.+.... +. +...-.+++..+
T Consensus 639 i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~-d--~~v~vwd~~-~~~~~~~---~~~~~~~v~~~~~~~~~ 711 (1249)
T 3sfz_A 639 LQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSA-D--KKVKIWDSA-TGKLVHT---YDEHSEQVNCCHFTNKS 711 (1249)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET-T--SEEEEEETT-TCCEEEE---EECCSSCEEEEEECSSS
T ss_pred EEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeC-C--CeEEEEECC-CCceEEE---EcCCCCcEEEEEEecCC
Confidence 678998887653322223333333456679999999986 3 579999987 6543221 22 122223334444
Q ss_pred CCcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEecC--cEEEeeCCCCeEEE
Q 048136 179 DGSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFANN--RSILLDPRANYVLR 255 (559)
Q Consensus 179 dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg~--~~e~yDp~t~~W~~ 255 (559)
++.+++.|+.+ ..+.+| ..++. ....+ .... ..-..+...++|++++.|+. .+.+||..++.-..
T Consensus 712 ~~~~l~sg~~d-~~v~vwd~~~~~-----~~~~~-~~h~-----~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~ 779 (1249)
T 3sfz_A 712 NHLLLATGSND-FFLKLWDLNQKE-----CRNTM-FGHT-----NSVNHCRFSPDDELLASCSADGTLRLWDVRSANERK 779 (1249)
T ss_dssp SCCEEEEEETT-SCEEEEETTSSS-----EEEEE-CCCS-----SCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEE
T ss_pred CceEEEEEeCC-CeEEEEECCCcc-----hhhee-cCCC-----CCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccc
Confidence 45566666655 356677 44321 11111 1110 01112344578998888864 57889988775443
Q ss_pred ECC--CCCCCCCcccC--CCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCce
Q 048136 256 EYP--PLPGGARNYPS--TSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVW 331 (559)
Q Consensus 256 ~~p--~mp~~~~~~p~--~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W 331 (559)
.+. .........+. ......+... .+++.+++++.. .+..+|+.. ...
T Consensus 780 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s--------~dg~~l~~~~~~------------------~v~~~d~~~--~~~ 831 (1249)
T 3sfz_A 780 SINVKRFFLSSEDPPEDVEVIVKCCSWS--------ADGDKIIVAAKN------------------KVLLFDIHT--SGL 831 (1249)
T ss_dssp EEECCCCC--------CCCCCBCCCCBC--------TTSSEEEEEETT------------------EEEEEETTT--CCE
T ss_pred eecccccccccCCccccccceEEEEEEC--------CCCCEEEEEcCC------------------cEEEEEecC--CCc
Confidence 221 10000000000 0000011111 256666666521 233455442 111
Q ss_pred eee-c-CCCCcccccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCccceeeeEECC
Q 048136 332 TTE-K-MPTPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANLLP 409 (559)
Q Consensus 332 ~~~-~-M~~~R~~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~llp 409 (559)
... . -....... ....|+|+.+++|+.+ + .+.+||..+. +-...-...... -....+.|
T Consensus 832 ~~~~~~~~~~~v~~-~~~sp~~~~l~~~~~d-g------------~v~vwd~~~~---~~~~~~~~h~~~--v~~v~~sp 892 (1249)
T 3sfz_A 832 LAEIHTGHHSTIQY-CDFSPYDHLAVIALSQ-Y------------CVELWNIDSR---LKVADCRGHLSW--VHGVMFSP 892 (1249)
T ss_dssp EEEEECSSSSCCCE-EEECSSTTEEEEECSS-S------------CEEEEETTTT---EEEEEECCCSSC--EEEEEECT
T ss_pred eeEEcCCCCCceEE-EEEcCCCCEEEEEeCC-C------------eEEEEEcCCC---ceeeecCCCccc--eEEEEECC
Confidence 111 1 12222222 4567899999998764 1 6789998876 322211111111 12356789
Q ss_pred CCceEEeCCCCC
Q 048136 410 DGRVFVGGSNDN 421 (559)
Q Consensus 410 dG~Vlv~GG~~~ 421 (559)
||+.+++|+.+.
T Consensus 893 dg~~l~s~s~dg 904 (1249)
T 3sfz_A 893 DGSSFLTASDDQ 904 (1249)
T ss_dssp TSSEEEEEETTS
T ss_pred CCCEEEEEeCCC
Confidence 999999988654
No 85
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=96.84 E-value=0.062 Score=63.66 Aligned_cols=246 Identities=11% Similarity=0.021 Sum_probs=126.5
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCc
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGS 181 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~ 181 (559)
..+||..+++.......+..........+||+.+++|+. + ..+++||.. +.+..... .....-.+.+..++++
T Consensus 985 i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~-d--g~i~vwd~~-~~~~~~~~---~~~~~v~~~~~~~~~~ 1057 (1249)
T 3sfz_A 985 IKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSE-D--SVIQVWNWQ-TGDYVFLQ---AHQETVKDFRLLQDSR 1057 (1249)
T ss_dssp CEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECS-S--SBEEEEETT-TTEEECCB---CCSSCEEEEEECSSSE
T ss_pred EEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcC-C--CEEEEEECC-CCceEEEe---cCCCcEEEEEEcCCCc
Confidence 567888776654332223333333456679999999886 3 579999988 66655432 2223334455666666
Q ss_pred EEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEecC--cEEEeeCCCCeEEEECC
Q 048136 182 FLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFANN--RSILLDPRANYVLREYP 258 (559)
Q Consensus 182 VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg~--~~e~yDp~t~~W~~~~p 258 (559)
+ ++|+.+ ..+.+| ..+++ -. ..+ .... ..-..+...++|+.++.|+. .+.+||..+.+- +.
T Consensus 1058 l-~~~~~d-g~v~vwd~~~~~---~~--~~~-~~~~-----~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~---~~ 1121 (1249)
T 3sfz_A 1058 L-LSWSFD-GTVKVWNVITGR---IE--RDF-TCHQ-----GTVLSCAISSDATKFSSTSADKTAKIWSFDLLSP---LH 1121 (1249)
T ss_dssp E-EEEESS-SEEEEEETTTTC---CC--EEE-ECCS-----SCCCCEEECSSSSSCEEECCSSCCCEECSSSSSC---SB
T ss_pred E-EEEECC-CcEEEEECCCCc---ee--EEE-cccC-----CcEEEEEECCCCCEEEEEcCCCcEEEEECCCcce---ee
Confidence 5 455544 346667 43331 11 111 1100 01122345679998888864 577888876642 22
Q ss_pred CCCCCCCcccCCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeeec---
Q 048136 259 PLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTEK--- 335 (559)
Q Consensus 259 ~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~--- 335 (559)
.+.+ + .+....+... .+++++++|+.++ ++..+|+.......+..+
T Consensus 1122 ~l~~----h--~~~v~~~~~s--------~dg~~lat~~~dg-----------------~i~vwd~~~~~~~~~~~~~~~ 1170 (1249)
T 3sfz_A 1122 ELKG----H--NGCVRCSAFS--------LDGILLATGDDNG-----------------EIRIWNVSDGQLLHSCAPISV 1170 (1249)
T ss_dssp CCCC----C--SSCEEEEEEC--------SSSSEEEEEETTS-----------------CCCEEESSSSCCCCCCCCCC-
T ss_pred eecc----C--CCcEEEEEEC--------CCCCEEEEEeCCC-----------------EEEEEECCCCceEEEeccccc
Confidence 2221 1 1111111111 2788888887652 233455443111111100
Q ss_pred ----CCCCcccccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCccceeeeEECCCC
Q 048136 336 ----MPTPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANLLPDG 411 (559)
Q Consensus 336 ----M~~~R~~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~llpdG 411 (559)
......-.+....|||+.++.+| | .+.+||..+. +-...-....... ....+.|||
T Consensus 1171 ~~~~~~~~~~v~~l~fs~dg~~l~s~~---g------------~v~vwd~~~g---~~~~~~~~~~~~i--~~~~~s~dg 1230 (1249)
T 3sfz_A 1171 EEGTATHGGWVTDVCFSPDSKTLVSAG---G------------YLKWWNVATG---DSSQTFYTNGTNL--KKIHVSPDF 1230 (1249)
T ss_dssp ------CCSCCCEEEECTTSSCEEEES---S------------SEEEBCSSSC---BCCCCCCCSSCCC--CCCEECSSS
T ss_pred cccccccCceEEEEEECCCCCEEEECC---C------------eEEEEECCCC---ceeeeeeccCCcc--cEEEECCCC
Confidence 01111111234568999888875 1 5789998776 3221111111111 234577999
Q ss_pred ceEEeCCCCC
Q 048136 412 RVFVGGSNDN 421 (559)
Q Consensus 412 ~Vlv~GG~~~ 421 (559)
+.+++|+...
T Consensus 1231 ~~l~~~~~dg 1240 (1249)
T 3sfz_A 1231 RTYVTVDNLG 1240 (1249)
T ss_dssp CCEEEECTTC
T ss_pred CEEEEecCCc
Confidence 9999988643
No 86
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.84 E-value=0.12 Score=51.87 Aligned_cols=216 Identities=11% Similarity=-0.002 Sum_probs=110.8
Q ss_pred CCeEEEEeCCCCCCeecCC----CccccccccceEEEccCCcEEEEcCCCCCceeEE-cCCCCCCCcceecccccccccc
Q 048136 144 SRTTRYLWGCPTCDWTEYP----TALKDGRWYATQALLADGSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDV 218 (559)
Q Consensus 144 ~~~v~~ydp~~t~~W~~~~----~~m~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~ 218 (559)
..++.+|||. +.++...- +....+..-...+ +.++++||+... ...+.++ +++.+ -....+.
T Consensus 16 ~~~l~~~d~~-t~~~~~~i~~~~n~~~lg~~~~~i~-~~~~~lyv~~~~-~~~v~viD~~t~~---~~~~i~~------- 82 (328)
T 3dsm_A 16 NATLSYYDPA-TCEVENEVFYRANGFKLGDVAQSMV-IRDGIGWIVVNN-SHVIFAIDINTFK---EVGRITG------- 82 (328)
T ss_dssp CBEEEEEETT-TTEEECSHHHHHHSSCCBSCEEEEE-EETTEEEEEEGG-GTEEEEEETTTCC---EEEEEEC-------
T ss_pred CceEEEEECC-CCEEhhhhHhhhcCcccCccceEEE-EECCEEEEEEcC-CCEEEEEECcccE---EEEEcCC-------
Confidence 4689999999 77765421 0011222223344 458899998753 2457777 66542 1111111
Q ss_pred ccCCccceEEEe-eCCcEEEEe--cCcEEEeeCCCCeEEEECCCCCCC--CCcccCCCceeecccccccccccccCcEEE
Q 048136 219 LENNLYPFVYLV-PDGNLYIFA--NNRSILLDPRANYVLREYPPLPGG--ARNYPSTSTSVLLPLKLYRDYYARVDAEVL 293 (559)
Q Consensus 219 ~~~~~yp~~~~l-~~G~iyv~G--g~~~e~yDp~t~~W~~~~p~mp~~--~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~ 293 (559)
...|...+. ++|++|+.. +..+.++|+++++....++. ... ....|. .+.+ .++++|
T Consensus 83 ---~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~-g~~~~~~~~p~---~i~~-----------~~~~ly 144 (328)
T 3dsm_A 83 ---FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIEC-PDMDMESGSTE---QMVQ-----------YGKYVY 144 (328)
T ss_dssp ---CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEEC-TTCCTTTCBCC---CEEE-----------ETTEEE
T ss_pred ---CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEc-CCccccCCCcc---eEEE-----------ECCEEE
Confidence 123444444 799999987 46788999999986643421 110 011221 2221 278899
Q ss_pred EEcCCCCccccccccccccccccCceEEEEecCCCCceeee-cCCCCcccccEEEeeCCeEEEEcCcCCCCCCccCCCCC
Q 048136 294 ICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTE-KMPTPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKP 372 (559)
Q Consensus 294 v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~ 372 (559)
+..-.. .+++.+||+.. .+.... +. +..-.....-+||++|++.-.......|.. .
T Consensus 145 v~~~~~----------------~~~v~viD~~t--~~~~~~i~~--g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~---~ 201 (328)
T 3dsm_A 145 VNCWSY----------------QNRILKIDTET--DKVVDELTI--GIQPTSLVMDKYNKMWTITDGGYEGSPYGY---E 201 (328)
T ss_dssp EEECTT----------------CCEEEEEETTT--TEEEEEEEC--SSCBCCCEECTTSEEEEEBCCBCTTCSSCB---C
T ss_pred EEcCCC----------------CCEEEEEECCC--CeEEEEEEc--CCCccceEEcCCCCEEEEECCCccCCcccc---C
Confidence 885210 13456777653 333222 22 111122455689999998643211000100 0
Q ss_pred CcccEEEeCCCCCCCeEEecCCCCCCccceeeeEECCCCc-eEEeC
Q 048136 373 CFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANLLPDGR-VFVGG 417 (559)
Q Consensus 373 ~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~llpdG~-Vlv~G 417 (559)
...+.++|+++. +....-..+....-+ ..++.|||+ +|++.
T Consensus 202 ~~~v~~id~~t~---~v~~~~~~~~g~~p~-~la~~~d~~~lyv~~ 243 (328)
T 3dsm_A 202 APSLYRIDAETF---TVEKQFKFKLGDWPS-EVQLNGTRDTLYWIN 243 (328)
T ss_dssp CCEEEEEETTTT---EEEEEEECCTTCCCE-EEEECTTSCEEEEES
T ss_pred CceEEEEECCCC---eEEEEEecCCCCCce-eEEEecCCCEEEEEc
Confidence 136899999988 654321221111112 345667665 56653
No 87
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.81 E-value=0.24 Score=51.37 Aligned_cols=247 Identities=12% Similarity=0.112 Sum_probs=119.6
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCcccc-ccccceEEEc--c
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKD-GRWYATQALL--A 178 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~-~R~y~s~~~L--~ 178 (559)
..+||..+++-...-..+...........++ ++++|+. + ..+.+||.. +.+-... +.. ...-.+.... +
T Consensus 144 i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~-d--g~i~vwd~~-~~~~~~~---~~~h~~~v~~l~~~~~~ 215 (464)
T 3v7d_B 144 IRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGST-D--RTVRVWDIK-KGCCTHV---FEGHNSTVRCLDIVEYK 215 (464)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEET-T--SCEEEEETT-TTEEEEE---ECCCSSCEEEEEEEESS
T ss_pred EEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeC-C--CCEEEEECC-CCcEEEE---ECCCCCccEEEEEecCC
Confidence 6788887765432211222211122233455 7777776 3 578999987 5542211 221 1111122222 4
Q ss_pred CCcEEEEcCCCCCceeEE-cCCCCCCC-------cceec------cccccccccccCCccceEEEeeCCcEEEEec--Cc
Q 048136 179 DGSFLIFGGRDSFSYEYI-PAERTENA-------YSIPF------QFLRDTYDVLENNLYPFVYLVPDGNLYIFAN--NR 242 (559)
Q Consensus 179 dG~VyvvGG~~~~s~E~y-P~~~~~~~-------w~~~~------p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg--~~ 242 (559)
+++.++.|+.++ .+.+| ..+..... ..... +..... ..........+.++|++++.|+ ..
T Consensus 216 ~~~~l~s~s~d~-~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~l~~~~~d~~ 291 (464)
T 3v7d_B 216 NIKYIVTGSRDN-TLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGV---LRGHMASVRTVSGHGNIVVSGSYDNT 291 (464)
T ss_dssp SCEEEEEEETTS-CEEEEECCCCCCC------CCSSEEESCGGGCTTEEEE---ECCCSSCEEEEEEETTEEEEEETTSC
T ss_pred CCCEEEEEcCCC-cEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEE---ccCccceEEEEcCCCCEEEEEeCCCe
Confidence 778888888764 45555 22211000 00000 000000 0001122234456888888876 46
Q ss_pred EEEeeCCCCeEEEECCCCCCCCCcccCCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEE
Q 048136 243 SILLDPRANYVLREYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARM 322 (559)
Q Consensus 243 ~e~yDp~t~~W~~~~p~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~ 322 (559)
+.+||..+.+-...+.. ... + -.++.+ . .+++.+++|+.+ ..+..+
T Consensus 292 i~vwd~~~~~~~~~~~~----~~~-~--v~~~~~--~--------~~~~~l~sg~~d-----------------g~i~vw 337 (464)
T 3v7d_B 292 LIVWDVAQMKCLYILSG----HTD-R--IYSTIY--D--------HERKRCISASMD-----------------TTIRIW 337 (464)
T ss_dssp EEEEETTTTEEEEEECC----CSS-C--EEEEEE--E--------TTTTEEEEEETT-----------------SCEEEE
T ss_pred EEEEECCCCcEEEEecC----CCC-C--EEEEEE--c--------CCCCEEEEEeCC-----------------CcEEEE
Confidence 88999988875543321 010 0 112211 1 256778888764 234456
Q ss_pred EecCCCCceeee-cCCCCcccccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCccc
Q 048136 323 VVTSPDPVWTTE-KMPTPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMY 401 (559)
Q Consensus 323 d~~~~~~~W~~~-~M~~~R~~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~y 401 (559)
|+.. .+.. .+.........+. .+++.++.|+.+ | .+.+||..+.. ..++... ...
T Consensus 338 d~~~----~~~~~~~~~h~~~v~~~~-~~~~~l~s~s~d-g------------~v~vwd~~~~~-~~~~~~~----~~~- 393 (464)
T 3v7d_B 338 DLEN----GELMYTLQGHTALVGLLR-LSDKFLVSAAAD-G------------SIRGWDANDYS-RKFSYHH----TNL- 393 (464)
T ss_dssp ETTT----TEEEEEECCCSSCEEEEE-ECSSEEEEEETT-S------------EEEEEETTTCC-EEEEEEC----TTC-
T ss_pred ECCC----CcEEEEEeCCCCcEEEEE-EcCCEEEEEeCC-C------------cEEEEECCCCc-eeeeecC----CCC-
Confidence 6542 1111 2221222222333 478888888765 1 68899998761 1222111 111
Q ss_pred eeeeEECCCCceEEeCC
Q 048136 402 HSVANLLPDGRVFVGGS 418 (559)
Q Consensus 402 hs~a~llpdG~Vlv~GG 418 (559)
.....+.+||+++++|+
T Consensus 394 ~~~~~~~~~~~~l~~~~ 410 (464)
T 3v7d_B 394 SAITTFYVSDNILVSGS 410 (464)
T ss_dssp CCEEEEEECSSEEEEEE
T ss_pred ccEEEEEeCCCEEEEec
Confidence 12455678999999987
No 88
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=96.79 E-value=0.22 Score=49.05 Aligned_cols=107 Identities=9% Similarity=-0.069 Sum_probs=53.3
Q ss_pred CCeEEEEeCCCCCCeecCCCccccccccceEEEccCCc-EEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccC
Q 048136 144 SRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGS-FLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLEN 221 (559)
Q Consensus 144 ~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~-VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~ 221 (559)
...+.++|+. +.+.... ......-.+.+.-+||+ +|+.+..+ ..+.+| +.+++ -....+...........
T Consensus 68 ~~~v~~~d~~-~~~~~~~---~~~~~~~~~~~~s~dg~~l~v~~~~~-~~v~~~d~~~~~---~~~~~~~~~~~~~~~~~ 139 (353)
T 3vgz_A 68 GGVVYRLDPV-TLEVTQA---IHNDLKPFGATINNTTQTLWFGNTVN-SAVTAIDAKTGE---VKGRLVLDDRKRTEEVR 139 (353)
T ss_dssp SEEEEEECTT-TCCEEEE---EEESSCCCSEEEETTTTEEEEEETTT-TEEEEEETTTCC---EEEEEESCCCCCCSSCC
T ss_pred CccEEEEcCC-CCeEEEE---EecCCCcceEEECCCCCEEEEEecCC-CEEEEEeCCCCe---eEEEEecCCCccccccC
Confidence 3578999998 6553322 22222234556667887 66665543 356677 55442 11111110000000000
Q ss_pred Cccce-EEEeeCCc-EEEEe---cCcEEEeeCCCCeEEEECC
Q 048136 222 NLYPF-VYLVPDGN-LYIFA---NNRSILLDPRANYVLREYP 258 (559)
Q Consensus 222 ~~yp~-~~~l~~G~-iyv~G---g~~~e~yDp~t~~W~~~~p 258 (559)
...+. +...++|+ +|+.+ +..+.+||+.+.+-...++
T Consensus 140 ~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~ 181 (353)
T 3vgz_A 140 PLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQ 181 (353)
T ss_dssp CCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEEC
T ss_pred CCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEec
Confidence 01122 34456776 66655 2458899999887664443
No 89
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.79 E-value=0.43 Score=49.35 Aligned_cols=214 Identities=10% Similarity=0.019 Sum_probs=108.6
Q ss_pred eEEEeCCCCCEEeCccCCCc--ccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCC----------------
Q 048136 102 SVFYNVNTLQVTPLKVITDT--WCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPT---------------- 163 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~--~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~---------------- 163 (559)
..+||..+++....-..+.. .|-.-....+++.+++|+.. ..+.+||.. +.+-.....
T Consensus 185 i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d---~~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (464)
T 3v7d_B 185 VRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRD---NTLHVWKLP-KESSVPDHGEEHDYPLVFHTPEENP 260 (464)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETT---SCEEEEECC-CCCCC------CCSSEEESCGGGCT
T ss_pred EEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCC---CcEEEeeCC-CCcccccccccCCcceEeeccCCCe
Confidence 67888887764332222221 12111112578899998863 478888876 433111000
Q ss_pred ---ccccccccceEEEccCCcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEe
Q 048136 164 ---ALKDGRWYATQALLADGSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFA 239 (559)
Q Consensus 164 ---~m~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~G 239 (559)
...........+.-++++.+++|+.++ .+.+| ..+. .....+ .... ..-..+...++|+.++.|
T Consensus 261 ~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~-~i~vwd~~~~-----~~~~~~-~~~~-----~~v~~~~~~~~~~~l~sg 328 (464)
T 3v7d_B 261 YFVGVLRGHMASVRTVSGHGNIVVSGSYDN-TLIVWDVAQM-----KCLYIL-SGHT-----DRIYSTIYDHERKRCISA 328 (464)
T ss_dssp TEEEEECCCSSCEEEEEEETTEEEEEETTS-CEEEEETTTT-----EEEEEE-CCCS-----SCEEEEEEETTTTEEEEE
T ss_pred EEEEEccCccceEEEEcCCCCEEEEEeCCC-eEEEEECCCC-----cEEEEe-cCCC-----CCEEEEEEcCCCCEEEEE
Confidence 000111111222334788888888764 46667 3332 111111 1100 011123345688888888
Q ss_pred c--CcEEEeeCCCCeEEEECCCCCCCCCcccCCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccC
Q 048136 240 N--NRSILLDPRANYVLREYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALD 317 (559)
Q Consensus 240 g--~~~e~yDp~t~~W~~~~p~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~ 317 (559)
+ ..+.+||..+++-...+.. . ......+. .+++.+++|+.++
T Consensus 329 ~~dg~i~vwd~~~~~~~~~~~~-------h--~~~v~~~~----------~~~~~l~s~s~dg----------------- 372 (464)
T 3v7d_B 329 SMDTTIRIWDLENGELMYTLQG-------H--TALVGLLR----------LSDKFLVSAAADG----------------- 372 (464)
T ss_dssp ETTSCEEEEETTTTEEEEEECC-------C--SSCEEEEE----------ECSSEEEEEETTS-----------------
T ss_pred eCCCcEEEEECCCCcEEEEEeC-------C--CCcEEEEE----------EcCCEEEEEeCCC-----------------
Confidence 6 4588999998875543321 0 11111111 2567778877652
Q ss_pred ceEEEEecCCCCceeeecCCCCcccccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCC
Q 048136 318 DCARMVVTSPDPVWTTEKMPTPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKP 384 (559)
Q Consensus 318 s~~~~d~~~~~~~W~~~~M~~~R~~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~ 384 (559)
.+..+|+......+... ..........-++|+++++|+ + | .+.+||.++.
T Consensus 373 ~v~vwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~-d-g------------~i~iwd~~~g 422 (464)
T 3v7d_B 373 SIRGWDANDYSRKFSYH---HTNLSAITTFYVSDNILVSGS-E-N------------QFNIYNLRSG 422 (464)
T ss_dssp EEEEEETTTCCEEEEEE---CTTCCCEEEEEECSSEEEEEE-T-T------------EEEEEETTTC
T ss_pred cEEEEECCCCceeeeec---CCCCccEEEEEeCCCEEEEec-C-C------------eEEEEECCCC
Confidence 34456655322122211 111222235668999999876 2 2 6899999887
No 90
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=96.78 E-value=0.5 Score=47.01 Aligned_cols=63 Identities=11% Similarity=-0.008 Sum_probs=40.8
Q ss_pred CeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccc-cccccceEEEccCCcEEEEcCCCCCceeEE
Q 048136 126 GGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALK-DGRWYATQALLADGSFLIFGGRDSFSYEYI 196 (559)
Q Consensus 126 ~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~-~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y 196 (559)
..+.+++++++.|+.. ..+++||.. +.+.... +. +...-.+++.-+||+.++.||.+. .+.+|
T Consensus 82 ~~~~~~~~~l~s~s~D---~~v~lwd~~-~~~~~~~---~~~h~~~v~~v~~sp~~~~l~s~~~d~-~i~~w 145 (343)
T 2xzm_R 82 LALSQENCFAISSSWD---KTLRLWDLR-TGTTYKR---FVGHQSEVYSVAFSPDNRQILSAGAER-EIKLW 145 (343)
T ss_dssp EEECSSTTEEEEEETT---SEEEEEETT-SSCEEEE---EECCCSCEEEEEECSSTTEEEEEETTS-CEEEE
T ss_pred EEECCCCCEEEEEcCC---CcEEEEECC-CCcEEEE---EcCCCCcEEEEEECCCCCEEEEEcCCC-EEEEE
Confidence 3455789999999873 589999987 5543221 22 222233455667899999988764 45555
No 91
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.77 E-value=0.25 Score=48.36 Aligned_cols=88 Identities=15% Similarity=0.193 Sum_probs=47.6
Q ss_pred eEEEeCCCCCE---EeCccC--CCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEE
Q 048136 102 SVFYNVNTLQV---TPLKVI--TDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQAL 176 (559)
Q Consensus 102 ~~~yDp~t~~w---~~~~~~--~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~ 176 (559)
+.+||..+.+. .+...+ +........+.+||+.+++|+. + ..+.+++.. ........ ............
T Consensus 63 i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~-d--~~i~~~~~~-~~~~~~~~--~~~~~~~~~~~~ 136 (340)
T 4aow_A 63 IIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSW-D--GTLRLWDLT-TGTTTRRF--VGHTKDVLSVAF 136 (340)
T ss_dssp EEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEET-T--SEEEEEETT-TTEEEEEE--ECCSSCEEEEEE
T ss_pred EEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcc-c--ccceEEeec-ccceeeee--cCCCCceeEEEE
Confidence 56788765432 222111 2222223345679999999987 3 478888876 44332221 112222233445
Q ss_pred ccCCcEEEEcCCCCCceeEE
Q 048136 177 LADGSFLIFGGRDSFSYEYI 196 (559)
Q Consensus 177 L~dG~VyvvGG~~~~s~E~y 196 (559)
.++++.++.|+.+. .+.+|
T Consensus 137 ~~~~~~l~s~s~d~-~~~~~ 155 (340)
T 4aow_A 137 SSDNRQIVSGSRDK-TIKLW 155 (340)
T ss_dssp CTTSSCEEEEETTS-CEEEE
T ss_pred eecCccceeecCCC-eEEEE
Confidence 56788888887664 34455
No 92
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.76 E-value=0.25 Score=48.34 Aligned_cols=135 Identities=7% Similarity=-0.028 Sum_probs=63.5
Q ss_pred eEEEeCC--CCCEEeCccCC-CcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCC-eecCCCccccccccceEEEc
Q 048136 102 SVFYNVN--TLQVTPLKVIT-DTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCD-WTEYPTALKDGRWYATQALL 177 (559)
Q Consensus 102 ~~~yDp~--t~~w~~~~~~~-~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~-W~~~~~~m~~~R~y~s~~~L 177 (559)
..+||.. +++++.+.... .......++.+||+.+++++.. ...+.+||.. ... ...... +.....-...+.-
T Consensus 62 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~--~~~i~~~d~~-~~~~~~~~~~-~~~~~~~~~~~~s 137 (343)
T 1ri6_A 62 VLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYN--AGNVSVTRLE-DGLPVGVVDV-VEGLDGCHSANIS 137 (343)
T ss_dssp EEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETT--TTEEEEEEEE-TTEEEEEEEE-ECCCTTBCCCEEC
T ss_pred EEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecC--CCeEEEEECC-CCcccccccc-ccCCCCceEEEEC
Confidence 5667765 77777554321 1122233456789865555442 2468888873 221 222111 2222223345566
Q ss_pred cCCc-EEEEcCCCCCceeEE-cCCCCCCCcceec--cccccccccccCCccce-EEEeeCCc-EEEEec--CcEEEeeCC
Q 048136 178 ADGS-FLIFGGRDSFSYEYI-PAERTENAYSIPF--QFLRDTYDVLENNLYPF-VYLVPDGN-LYIFAN--NRSILLDPR 249 (559)
Q Consensus 178 ~dG~-VyvvGG~~~~s~E~y-P~~~~~~~w~~~~--p~l~~~~d~~~~~~yp~-~~~l~~G~-iyv~Gg--~~~e~yDp~ 249 (559)
+||+ +|+.+.. ...+.+| ..++. ...... ..... ....+. +...++|+ ||+.+. ..+.+||..
T Consensus 138 ~dg~~l~~~~~~-~~~v~~~d~~~~~--~~~~~~~~~~~~~------~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~ 208 (343)
T 1ri6_A 138 PDNRTLWVPALK-QDRICLFTVSDDG--HLVAQDPAEVTTV------EGAGPRHMVFHPNEQYAYCVNELNSSVDVWELK 208 (343)
T ss_dssp TTSSEEEEEEGG-GTEEEEEEECTTS--CEEEEEEEEEECS------TTCCEEEEEECTTSSEEEEEETTTTEEEEEESS
T ss_pred CCCCEEEEecCC-CCEEEEEEecCCC--ceeeecccccccC------CCCCcceEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 7886 5554422 2346666 44310 111111 11000 011222 34457887 666652 467888884
No 93
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=96.75 E-value=0.43 Score=45.85 Aligned_cols=89 Identities=12% Similarity=0.012 Sum_probs=49.0
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCc
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGS 181 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~ 181 (559)
..+||..+++.......+..........++++.+++|+.. ..+.+||............ +......-..... +++
T Consensus 41 v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~-~~~ 115 (313)
T 3odt_A 41 VRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKD---TMINGVPLFATSGEDPLYT-LIGHQGNVCSLSF-QDG 115 (313)
T ss_dssp EEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETT---SCEEEEETTCCTTSCC-CE-ECCCSSCEEEEEE-ETT
T ss_pred EEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCC---CeEEEEEeeecCCCCcccc-hhhcccCEEEEEe-cCC
Confidence 6788887665444333333333344567799999999873 4677788652122222221 3222222233334 788
Q ss_pred EEEEcCCCCCceeEE
Q 048136 182 FLIFGGRDSFSYEYI 196 (559)
Q Consensus 182 VyvvGG~~~~s~E~y 196 (559)
.+++|+.++ .+.+|
T Consensus 116 ~l~~~~~d~-~i~~~ 129 (313)
T 3odt_A 116 VVISGSWDK-TAKVW 129 (313)
T ss_dssp EEEEEETTS-EEEEE
T ss_pred EEEEEeCCC-CEEEE
Confidence 888888764 34455
No 94
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=96.75 E-value=0.27 Score=48.43 Aligned_cols=87 Identities=11% Similarity=0.010 Sum_probs=50.3
Q ss_pred eEEEeCCCCCEEeCc--cCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEE--c
Q 048136 102 SVFYNVNTLQVTPLK--VITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQAL--L 177 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~--~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~--L 177 (559)
..+||..++...... ..+..........++|+.+++|+. + ..+++||.. +.+.... ......-.+++. -
T Consensus 66 i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~-d--g~v~iwd~~-~~~~~~~---~~~~~~v~~~~~~~~ 138 (368)
T 3mmy_A 66 VRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASC-D--KTAKMWDLS-SNQAIQI---AQHDAPVKTIHWIKA 138 (368)
T ss_dssp EEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEET-T--SEEEEEETT-TTEEEEE---EECSSCEEEEEEEEC
T ss_pred EEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcC-C--CcEEEEEcC-CCCceee---ccccCceEEEEEEeC
Confidence 578888763322211 112222223445679999999886 3 589999987 6654432 112222223333 5
Q ss_pred cCCcEEEEcCCCCCceeEE
Q 048136 178 ADGSFLIFGGRDSFSYEYI 196 (559)
Q Consensus 178 ~dG~VyvvGG~~~~s~E~y 196 (559)
++++.++.|+.++ .+.+|
T Consensus 139 ~~~~~l~~~~~dg-~i~vw 156 (368)
T 3mmy_A 139 PNYSCVMTGSWDK-TLKFW 156 (368)
T ss_dssp SSCEEEEEEETTS-EEEEE
T ss_pred CCCCEEEEccCCC-cEEEE
Confidence 6888888888764 46667
No 95
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=96.75 E-value=0.34 Score=48.71 Aligned_cols=133 Identities=15% Similarity=0.133 Sum_probs=72.3
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCc
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGS 181 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~ 181 (559)
..+||..+++....-..+. ........+||+.++++|..+ ..+++||.. +.+.... +.....-.+.+..+||+
T Consensus 56 i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~--~~v~v~d~~-~~~~~~~---~~~~~~~~~~~~s~dg~ 128 (391)
T 1l0q_A 56 VSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMAS--STLSVIDTT-SNTVAGT---VKTGKSPLGLALSPDGK 128 (391)
T ss_dssp EEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTT--TEEEEEETT-TTEEEEE---EECSSSEEEEEECTTSS
T ss_pred EEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCC--CEEEEEECC-CCeEEEE---EeCCCCcceEEECCCCC
Confidence 6789988877654322222 222344567888655544322 579999998 6654332 22333334556667887
Q ss_pred -EEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccc-eEEEeeCCc-EEEEec--CcEEEeeCCCCeEEE
Q 048136 182 -FLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYP-FVYLVPDGN-LYIFAN--NRSILLDPRANYVLR 255 (559)
Q Consensus 182 -VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp-~~~~l~~G~-iyv~Gg--~~~e~yDp~t~~W~~ 255 (559)
+|+.++.+ ..+.+| ..+++ .....+. . ..+ .+...++|+ ||+.+. ..+.+||..+++...
T Consensus 129 ~l~~~~~~~-~~v~~~d~~~~~---~~~~~~~--~--------~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 194 (391)
T 1l0q_A 129 KLYVTNNGD-KTVSVINTVTKA---VINTVSV--G--------RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVID 194 (391)
T ss_dssp EEEEEETTT-TEEEEEETTTTE---EEEEEEC--C--------SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEEEeCCC-CEEEEEECCCCc---EEEEEec--C--------CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEE
Confidence 44665543 456667 44331 1111111 0 111 233456775 556654 458899999987654
No 96
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=96.73 E-value=0.1 Score=51.52 Aligned_cols=141 Identities=11% Similarity=0.119 Sum_probs=70.1
Q ss_pred eEEEeCCCCCEEeCccC-CCcccccCeecCC---CcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccc-cceE--
Q 048136 102 SVFYNVNTLQVTPLKVI-TDTWCSSGGLDVN---GNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRW-YATQ-- 174 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~-~~~~c~~~~~l~d---G~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~-y~s~-- 174 (559)
..+||..+++....... +..........++ |+++++|+.. ..+.+||.. +.+- .+.. +..... -.+.
T Consensus 46 v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d---g~i~iwd~~-~~~~-~~~~-~~~~~~~v~~~~~ 119 (357)
T 3i2n_A 46 IQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFG---GNLHIWNLE-APEM-PVYS-VKGHKEIINAIDG 119 (357)
T ss_dssp EEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETT---SCEEEECTT-SCSS-CSEE-ECCCSSCEEEEEE
T ss_pred EEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCC---CeEEEEeCC-CCCc-cEEE-EEecccceEEEee
Confidence 68899988877654322 2222222334455 7888998863 578999987 4430 1100 111111 1111
Q ss_pred ----EEccCCcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEE---EeeCCcEEEEecC--cEE
Q 048136 175 ----ALLADGSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVY---LVPDGNLYIFANN--RSI 244 (559)
Q Consensus 175 ----~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~---~l~~G~iyv~Gg~--~~e 244 (559)
+.-++++.++.|+.++ .+.+| ..... .-.......... .........+ ..+++++++.|+. .+.
T Consensus 120 ~~~~~~s~~~~~l~~~~~d~-~i~vwd~~~~~--~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~ 193 (357)
T 3i2n_A 120 IGGLGIGEGAPEIVTGSRDG-TVKVWDPRQKD--DPVANMEPVQGE---NKRDCWTVAFGNAYNQEERVVCAGYDNGDIK 193 (357)
T ss_dssp ESGGGCC-CCCEEEEEETTS-CEEEECTTSCS--SCSEEECCCTTS---CCCCEEEEEEECCCC-CCCEEEEEETTSEEE
T ss_pred ccccccCCCccEEEEEeCCC-eEEEEeCCCCC--CcceeccccCCC---CCCceEEEEEEeccCCCCCEEEEEccCCeEE
Confidence 1235788888888764 46667 43321 001111100000 0000110011 1268999988864 688
Q ss_pred EeeCCCCeEE
Q 048136 245 LLDPRANYVL 254 (559)
Q Consensus 245 ~yDp~t~~W~ 254 (559)
+||.++.+-.
T Consensus 194 i~d~~~~~~~ 203 (357)
T 3i2n_A 194 LFDLRNMALR 203 (357)
T ss_dssp EEETTTTEEE
T ss_pred EEECccCcee
Confidence 9999987644
No 97
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.70 E-value=0.15 Score=51.59 Aligned_cols=226 Identities=14% Similarity=0.096 Sum_probs=111.3
Q ss_pred eecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCC-cc-ccccccceEEEccCCcEEEEcCCCCCceeEE-cCCCCCC
Q 048136 127 GLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPT-AL-KDGRWYATQALLADGSFLIFGGRDSFSYEYI-PAERTEN 203 (559)
Q Consensus 127 ~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~-~m-~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~ 203 (559)
+..+|++++ +|+. + ..+++||.. +++-..... .+ .+...-.+++..+||+.++.|+.++ ++.+| ..++
T Consensus 89 ~~s~d~~l~-~~s~-d--g~v~lWd~~-~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~-~i~iwd~~~~--- 159 (344)
T 4gqb_B 89 TWVGERGIL-VASD-S--GAVELWELD-ENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDI-CIKVWDLAQQ--- 159 (344)
T ss_dssp EEETTTEEE-EEET-T--SEEEEEEEC-TTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS-CEEEEETTTT---
T ss_pred EEeCCCeEE-EEEC-C--CEEEEEecc-CCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCC-eEEEEECCCC---
Confidence 345676654 5554 3 589999987 554221110 01 1223334566678999999998764 56777 4432
Q ss_pred CcceeccccccccccccCCccceEEEeeCC-cEEEEec--CcEEEeeCCCCeEEEECCCCCCCCCcccCCCceeeccccc
Q 048136 204 AYSIPFQFLRDTYDVLENNLYPFVYLVPDG-NLYIFAN--NRSILLDPRANYVLREYPPLPGGARNYPSTSTSVLLPLKL 280 (559)
Q Consensus 204 ~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G-~iyv~Gg--~~~e~yDp~t~~W~~~~p~mp~~~~~~p~~g~~v~lpl~~ 280 (559)
.....+ ....+ .--.+...+++ .+++.|+ ..+.+||.++.+-...+.. . ...+ .-.++.. .+
T Consensus 160 --~~~~~~-~~h~~-----~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~-~--~~~~--~~~~~~~--~p 224 (344)
T 4gqb_B 160 --VVLSSY-RAHAA-----QVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGC-S--APGY--LPTSLAW--HP 224 (344)
T ss_dssp --EEEEEE-CCCSS-----CEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC-------CC--CEEEEEE--CS
T ss_pred --cEEEEE-cCcCC-----ceEEEEecCCCCCceeeeccccccccccccccceeeeeec-c--eeec--cceeeee--cC
Confidence 111111 11100 00112233555 5787775 4688999988765433311 0 0000 0111111 11
Q ss_pred ccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeeecCCCCcccccEEEeeCC-eEEEEcCc
Q 048136 281 YRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTEKMPTPRVMSDGVLLPTG-DVLLINGA 359 (559)
Q Consensus 281 ~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~R~~~~av~LpdG-~V~vvGG~ 359 (559)
.+++++++|+.+. ++..+|+.......+. .-....... ...-||| ++++.|+.
T Consensus 225 -------~~~~~l~sg~~dg-----------------~v~~wd~~~~~~~~~~-~~h~~~v~~-v~fsp~g~~~lasgs~ 278 (344)
T 4gqb_B 225 -------QQSEVFVFGDENG-----------------TVSLVDTKSTSCVLSS-AVHSQCVTG-LVFSPHSVPFLASLSE 278 (344)
T ss_dssp -------SCTTEEEEEETTS-----------------EEEEEESCC--CCEEE-ECCSSCEEE-EEECSSSSCCEEEEET
T ss_pred -------CCCcceEEeccCC-----------------cEEEEECCCCcEEEEE-cCCCCCEEE-EEEccCCCeEEEEEeC
Confidence 2577888887652 3445665431111111 111111221 2334787 57777765
Q ss_pred CCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCccceeeeEECCCCc-eEEeCCCCC
Q 048136 360 ELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANLLPDGR-VFVGGSNDN 421 (559)
Q Consensus 360 ~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~llpdG~-Vlv~GG~~~ 421 (559)
+ + ++.+||..+. +-..+... .... .....-|||+ +++.||.++
T Consensus 279 D-~------------~i~vwd~~~~---~~~~~~~H-~~~V--~~v~~sp~~~~llas~s~D~ 322 (344)
T 4gqb_B 279 D-C------------SLAVLDSSLS---ELFRSQAH-RDFV--RDATWSPLNHSLLTTVGWDH 322 (344)
T ss_dssp T-S------------CEEEECTTCC---EEEEECCC-SSCE--EEEEECSSSTTEEEEEETTS
T ss_pred C-C------------eEEEEECCCC---cEEEEcCC-CCCE--EEEEEeCCCCeEEEEEcCCC
Confidence 4 1 6789998776 53332111 1111 1234568885 777887643
No 98
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=96.67 E-value=0.26 Score=49.32 Aligned_cols=28 Identities=14% Similarity=0.259 Sum_probs=19.3
Q ss_pred EEEeeCCc-EEEEe--cCcEEEeeCCCCeEE
Q 048136 227 VYLVPDGN-LYIFA--NNRSILLDPRANYVL 254 (559)
Q Consensus 227 ~~~l~~G~-iyv~G--g~~~e~yDp~t~~W~ 254 (559)
+...+||+ ||+.. +..+.+||..+++..
T Consensus 216 ~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~ 246 (361)
T 3scy_A 216 LIFNSDGKFAYLINEIGGTVIAFRYADGMLD 246 (361)
T ss_dssp EEECTTSSEEEEEETTTCEEEEEEEETTEEE
T ss_pred EEEcCCCCEEEEEcCCCCeEEEEEecCCceE
Confidence 34567997 66665 356889998877653
No 99
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.67 E-value=0.33 Score=50.16 Aligned_cols=238 Identities=13% Similarity=0.076 Sum_probs=118.7
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCc
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGS 181 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~ 181 (559)
..+||..+.+....-..+.... ..+..++.++++|+. + ..+++||.. +.+-... +......-..... +++
T Consensus 141 i~vwd~~~~~~~~~~~~h~~~v--~~~~~~~~~l~s~~~-d--g~i~vwd~~-~~~~~~~---~~~h~~~v~~~~~-~~~ 210 (445)
T 2ovr_B 141 LKVWSAVTGKCLRTLVGHTGGV--WSSQMRDNIIISGST-D--RTLKVWNAE-TGECIHT---LYGHTSTVRCMHL-HEK 210 (445)
T ss_dssp EEEEETTTCCEEEECCCCSSCE--EEEEEETTEEEEEET-T--SCEEEEETT-TTEEEEE---ECCCSSCEEEEEE-ETT
T ss_pred EEEEECCCCcEEEEEcCCCCCE--EEEEecCCEEEEEeC-C--CeEEEEECC-cCcEEEE---ECCCCCcEEEEEe-cCC
Confidence 6789988776433222221111 112235778888886 3 579999987 5543211 2222212223334 677
Q ss_pred EEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEec--CcEEEeeCCCCeEEEECC
Q 048136 182 FLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN--NRSILLDPRANYVLREYP 258 (559)
Q Consensus 182 VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg--~~~e~yDp~t~~W~~~~p 258 (559)
.+++|+.++ .+.+| ..+++ - ...+ ... ..+...+..+|+.++.|+ ..+.+||..+.+-...+.
T Consensus 211 ~l~s~s~dg-~i~~wd~~~~~---~--~~~~-~~~-------~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 276 (445)
T 2ovr_B 211 RVVSGSRDA-TLRVWDIETGQ---C--LHVL-MGH-------VAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQ 276 (445)
T ss_dssp EEEEEETTS-EEEEEESSSCC---E--EEEE-ECC-------SSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEEC
T ss_pred EEEEEeCCC-EEEEEECCCCc---E--EEEE-cCC-------cccEEEEEECCCEEEEEcCCCEEEEEECCCCcEeEEec
Confidence 788887664 46667 43321 1 1111 111 112223444888888876 457899998876554332
Q ss_pred CCCCCCCcccCCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeeecCCC
Q 048136 259 PLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTEKMPT 338 (559)
Q Consensus 259 ~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~ 338 (559)
. . .+....+. .+++.+++|+.+ ..+..+|+....... .+..
T Consensus 277 ~-------~--~~~v~~~~----------~~~~~l~~~~~d-----------------~~i~i~d~~~~~~~~---~~~~ 317 (445)
T 2ovr_B 277 G-------H--TNRVYSLQ----------FDGIHVVSGSLD-----------------TSIRVWDVETGNCIH---TLTG 317 (445)
T ss_dssp C-------C--SSCEEEEE----------ECSSEEEEEETT-----------------SCEEEEETTTCCEEE---EECC
T ss_pred C-------C--CCceEEEE----------ECCCEEEEEeCC-----------------CeEEEEECCCCCEEE---EEcC
Confidence 1 0 01111111 256777777754 234456654311111 1111
Q ss_pred CcccccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCccceeeeEECCCCceEEeCC
Q 048136 339 PRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANLLPDGRVFVGGS 418 (559)
Q Consensus 339 ~R~~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~llpdG~Vlv~GG 418 (559)
...... .+.++++.+++|+.+ | .+.+||..+. +.-..+.... ... .....+..+++.+++|+
T Consensus 318 ~~~~v~-~~~~~~~~l~~~~~d-g------------~i~vwd~~~~--~~~~~~~~~~-~~~-~~v~~~~~~~~~l~s~~ 379 (445)
T 2ovr_B 318 HQSLTS-GMELKDNILVSGNAD-S------------TVKIWDIKTG--QCLQTLQGPN-KHQ-SAVTCLQFNKNFVITSS 379 (445)
T ss_dssp CCSCEE-EEEEETTEEEEEETT-S------------CEEEEETTTC--CEEEEECSTT-SCS-SCEEEEEECSSEEEEEE
T ss_pred CcccEE-EEEEeCCEEEEEeCC-C------------eEEEEECCCC--cEEEEEccCC-CCC-CCEEEEEECCCEEEEEe
Confidence 111222 234578888888754 1 6789998765 1222222110 010 11223344889999988
Q ss_pred CC
Q 048136 419 ND 420 (559)
Q Consensus 419 ~~ 420 (559)
.+
T Consensus 380 ~d 381 (445)
T 2ovr_B 380 DD 381 (445)
T ss_dssp TT
T ss_pred CC
Confidence 64
No 100
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.65 E-value=0.47 Score=44.90 Aligned_cols=133 Identities=17% Similarity=0.113 Sum_probs=67.5
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCc
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGS 181 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~ 181 (559)
...||+.+...............+-++..+|+||+... ...+.+||+. ........ ......-.+.+.-++|+
T Consensus 48 i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~----~~~i~~~d~~-~~~~~~~~--~~~~~~p~~i~~~~~g~ 120 (270)
T 1rwi_B 48 VVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF----NNRVVTLAAG-SNNQTVLP--FDGLNYPEGLAVDTQGA 120 (270)
T ss_dssp EEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET----TTEEEEECTT-CSCCEECC--CCSCSSEEEEEECTTCC
T ss_pred EEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC----CCEEEEEeCC-CceEeeee--cCCcCCCcceEECCCCC
Confidence 45677766655443322111222334556899998865 2478999998 55443332 11112223455666899
Q ss_pred EEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccce-EEEeeCCcEEEEec--CcEEEeeCCCCeEE
Q 048136 182 FLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPF-VYLVPDGNLYIFAN--NRSILLDPRANYVL 254 (559)
Q Consensus 182 VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~-~~~l~~G~iyv~Gg--~~~e~yDp~t~~W~ 254 (559)
+|+....+ ..+.+| +.+.. .. .... .. ...|. ...-++|+||+... ..+.+||+.++...
T Consensus 121 l~v~~~~~-~~i~~~~~~~~~---~~-~~~~-~~-------~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~ 184 (270)
T 1rwi_B 121 VYVADRGN-NRVVKLAAGSKT---QT-VLPF-TG-------LNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQV 184 (270)
T ss_dssp EEEEEGGG-TEEEEECTTCCS---CE-ECCC-CS-------CCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEE
T ss_pred EEEEECCC-CEEEEEECCCce---eE-eecc-cc-------CCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceE
Confidence 99975432 234455 22211 11 1110 00 01222 34456899998753 57889999887644
No 101
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=96.60 E-value=0.25 Score=48.28 Aligned_cols=238 Identities=13% Similarity=0.081 Sum_probs=112.8
Q ss_pred ecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccc-cccceEEEcc--CCcEEEEcCCCCCceeEE-cCCCCCC
Q 048136 128 LDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDG-RWYATQALLA--DGSFLIFGGRDSFSYEYI-PAERTEN 203 (559)
Q Consensus 128 ~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~-R~y~s~~~L~--dG~VyvvGG~~~~s~E~y-P~~~~~~ 203 (559)
+-+||+.+++|+.. ..+++||.. ..+...+.. +... ..-.+++..+ +|++++.|+.+. ++.+| ..++
T Consensus 17 ~s~~g~~las~s~D---~~v~iw~~~-~~~~~~~~~-l~gH~~~V~~v~~s~~~~g~~l~s~s~D~-~v~iWd~~~~--- 87 (297)
T 2pm7_B 17 MDYYGKRMATCSSD---KTIKIFEVE-GETHKLIDT-LTGHEGPVWRVDWAHPKFGTILASCSYDG-KVMIWKEENG--- 87 (297)
T ss_dssp ECTTSSEEEEEETT---SCEEEEEBC-SSCBCCCEE-ECCCSSCEEEEEECCGGGCSEEEEEETTT-EEEEEEBSSS---
T ss_pred ECCCCCEEEEEeCC---CEEEEEecC-CCCcEEEEE-EccccCCeEEEEecCCCcCCEEEEEcCCC-EEEEEEcCCC---
Confidence 44789999999873 579999986 444333221 3221 1112222222 388888888764 56777 4433
Q ss_pred CcceeccccccccccccCCccceEEEeeC--CcEEEEecC--cEEEeeCCCCe-EE-EECCCCCCCCCcccCCCcee-ec
Q 048136 204 AYSIPFQFLRDTYDVLENNLYPFVYLVPD--GNLYIFANN--RSILLDPRANY-VL-REYPPLPGGARNYPSTSTSV-LL 276 (559)
Q Consensus 204 ~w~~~~p~l~~~~d~~~~~~yp~~~~l~~--G~iyv~Gg~--~~e~yDp~t~~-W~-~~~p~mp~~~~~~p~~g~~v-~l 276 (559)
.+.....+ .... ..-..+...++ |++++.|+. .+.+||..++. +. ..+ .+ +...-.++ ..
T Consensus 88 ~~~~~~~~-~~h~-----~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~---~~----h~~~v~~~~~~ 154 (297)
T 2pm7_B 88 RWSQIAVH-AVHS-----ASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIII---DA----HAIGVNSASWA 154 (297)
T ss_dssp CBCCCEEE-CCCS-----SCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEE---EC----CSSCEEEEEEC
T ss_pred ceEEEEEe-ecCC-----CceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeee---ec----ccCccceEeec
Confidence 12211111 1000 00011222344 788887763 57788887652 11 001 00 00000011 11
Q ss_pred ccccccc--cccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeee-cCC--CCcccccEEEeeC-
Q 048136 277 PLKLYRD--YYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTE-KMP--TPRVMSDGVLLPT- 350 (559)
Q Consensus 277 pl~~~~~--~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~--~~R~~~~av~Lpd- 350 (559)
|...... .....++++++.|+.+ .++..+|+......|... .+. ...... ...-|+
T Consensus 155 p~~~~~~~~~~~~~~~~~l~sgs~D-----------------~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~-v~~sp~~ 216 (297)
T 2pm7_B 155 PATIEEDGEHNGTKESRKFVTGGAD-----------------NLVKIWKYNSDAQTYVLESTLEGHSDWVRD-VAWSPTV 216 (297)
T ss_dssp CCC------------CCEEEEEETT-----------------SCEEEEEEETTTTEEEEEEEECCCSSCEEE-EEECCCC
T ss_pred CCcccccccCCCCCCcceEEEEcCC-----------------CcEEEEEEcCCCceEEEEEEecCCCCceEE-EEECCCC
Confidence 1000000 0000125678888765 245566766433345443 332 222222 233466
Q ss_pred --CeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEe--cCCCCCCccceeeeEECCCCceEEeCCCC
Q 048136 351 --GDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTE--LAPSDIPRMYHSVANLLPDGRVFVGGSND 420 (559)
Q Consensus 351 --G~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~--~~~~~~~R~yhs~a~llpdG~Vlv~GG~~ 420 (559)
+++++.|+.+. ++.+||.++..+ .|.. +........- .....-|||+.+++||.+
T Consensus 217 ~~~~~las~s~D~-------------~v~iWd~~~~~~-~~~~~~~~~~~~~~~v-~~~~~s~~g~~las~~~D 275 (297)
T 2pm7_B 217 LLRSYMASVSQDR-------------TCIIWTQDNEQG-PWKKTLLKEEKFPDVL-WRASWSLSGNVLALSGGD 275 (297)
T ss_dssp SSSEEEEEEETTS-------------CEEEEEESSTTS-CCEEEESSSSCCSSCE-EEEEECSSSCCEEEEETT
T ss_pred CCceEEEEEECCC-------------cEEEEEeCCCCC-ccceeeeecccCCCcE-EEEEECCCCCEEEEEcCC
Confidence 47888887641 678999876421 3432 2111111111 134567999999998864
No 102
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=96.57 E-value=0.081 Score=53.26 Aligned_cols=133 Identities=11% Similarity=0.036 Sum_probs=65.9
Q ss_pred EEeCCCCCEEeCccCCCcccccCeecC-CCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCc----------cc-ccccc
Q 048136 104 FYNVNTLQVTPLKVITDTWCSSGGLDV-NGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTA----------LK-DGRWY 171 (559)
Q Consensus 104 ~yDp~t~~w~~~~~~~~~~c~~~~~l~-dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~----------m~-~~R~y 171 (559)
+||..+++-..+...+..........+ +|+++++|+. + ..+++||.. +.+....... +. +...-
T Consensus 27 v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~-d--g~i~iw~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v 102 (408)
T 4a11_B 27 VLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGS-D--GVIVLYDLE-NSSRQSYYTCKAVCSIGRDHPDVHRYSV 102 (408)
T ss_dssp HHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEET-T--SCEEEEECC-CCSSSSCEEECEEEEECTTCTTCCSSCE
T ss_pred eeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcC-C--CeEEEEECC-CCcccceEeccccccccccccccCCCcE
Confidence 344444433333333333333344566 8999999986 3 478999987 4443221000 00 22222
Q ss_pred ceEEEcc-CCcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEee---CCcEEEEec--CcEE
Q 048136 172 ATQALLA-DGSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVP---DGNLYIFAN--NRSI 244 (559)
Q Consensus 172 ~s~~~L~-dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~---~G~iyv~Gg--~~~e 244 (559)
.+++..+ ++++++.|+.++ .+.+| ..+.. ......... .-......+ ++++++.|+ ..+.
T Consensus 103 ~~~~~~~~~~~~l~s~~~d~-~i~iwd~~~~~---~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~v~ 169 (408)
T 4a11_B 103 ETVQWYPHDTGMFTSSSFDK-TLKVWDTNTLQ---TADVFNFEE---------TVYSHHMSPVSTKHCLVAVGTRGPKVQ 169 (408)
T ss_dssp EEEEECTTCTTCEEEEETTS-EEEEEETTTTE---EEEEEECSS---------CEEEEEECSSCSSCCEEEEEESSSSEE
T ss_pred EEEEEccCCCcEEEEEeCCC-eEEEeeCCCCc---cceeccCCC---------ceeeeEeecCCCCCcEEEEEcCCCeEE
Confidence 3344455 677888887654 45666 33321 111111100 001112223 555777775 3578
Q ss_pred EeeCCCCeE
Q 048136 245 LLDPRANYV 253 (559)
Q Consensus 245 ~yDp~t~~W 253 (559)
+||..+.+.
T Consensus 170 ~~d~~~~~~ 178 (408)
T 4a11_B 170 LCDLKSGSC 178 (408)
T ss_dssp EEESSSSCC
T ss_pred EEeCCCcce
Confidence 899887653
No 103
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=96.56 E-value=0.91 Score=49.38 Aligned_cols=255 Identities=11% Similarity=0.040 Sum_probs=124.9
Q ss_pred eEEEeCCCCCEEeCc--cCCCcccccCeecCCCcEEEEcCCCCC-CCeEEEEeCCCCCCeecCCCccc-cccccceEEEc
Q 048136 102 SVFYNVNTLQVTPLK--VITDTWCSSGGLDVNGNLISTGGFLGG-SRTTRYLWGCPTCDWTEYPTALK-DGRWYATQALL 177 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~--~~~~~~c~~~~~l~dG~i~v~GG~~~g-~~~v~~ydp~~t~~W~~~~~~m~-~~R~y~s~~~L 177 (559)
+.+||..+++..... ..+.......++-+||+.++++|..+. ...+++||.. ... .. +. +.+.-.+++.-
T Consensus 83 v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~-~~~-~~----l~gh~~~v~~v~f~ 156 (611)
T 1nr0_A 83 VRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTG-TSN-GN----LTGQARAMNSVDFK 156 (611)
T ss_dssp EEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTC-CBC-BC----CCCCSSCEEEEEEC
T ss_pred EEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCC-CCc-ce----ecCCCCCceEEEEC
Confidence 678888654432111 112222223456679998888875321 2367777743 211 11 22 22333455566
Q ss_pred cCCc-EEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEec--CcEEEeeCCCCeE
Q 048136 178 ADGS-FLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN--NRSILLDPRANYV 253 (559)
Q Consensus 178 ~dG~-VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg--~~~e~yDp~t~~W 253 (559)
+++. .++.|+.+ .++.+| ... ...... +.... ..-..+...+||++++.|+ ..+.+||..+++.
T Consensus 157 p~~~~~l~s~s~D-~~v~lwd~~~-----~~~~~~-l~~H~-----~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~ 224 (611)
T 1nr0_A 157 PSRPFRIISGSDD-NTVAIFEGPP-----FKFKST-FGEHT-----KFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTK 224 (611)
T ss_dssp SSSSCEEEEEETT-SCEEEEETTT-----BEEEEE-ECCCS-----SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred CCCCeEEEEEeCC-CeEEEEECCC-----CeEeee-ecccc-----CceEEEEECCCCCEEEEEECCCcEEEEECCCCcE
Confidence 6776 56777665 456667 322 111111 11111 0111233457999999886 4688999988765
Q ss_pred EEECCCCCCCCCcccCCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceee
Q 048136 254 LREYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTT 333 (559)
Q Consensus 254 ~~~~p~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~ 333 (559)
...+..-. .....+.+....+... .+++.++.|+.+. ++..+|+.. .+...
T Consensus 225 ~~~~~~~~--~~~~~h~~~V~~v~~s--------pdg~~l~s~s~D~-----------------~v~lWd~~~--~~~~~ 275 (611)
T 1nr0_A 225 TGVFEDDS--LKNVAHSGSVFGLTWS--------PDGTKIASASADK-----------------TIKIWNVAT--LKVEK 275 (611)
T ss_dssp EEECBCTT--SSSCSSSSCEEEEEEC--------TTSSEEEEEETTS-----------------EEEEEETTT--TEEEE
T ss_pred eeeecccc--ccccccCCCEEEEEEC--------CCCCEEEEEeCCC-----------------eEEEEeCCC--Cceee
Confidence 54331100 0001111221111111 2678888887652 334455432 22222
Q ss_pred e-cCCCCcccccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCccceeeeEECCCCc
Q 048136 334 E-KMPTPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANLLPDGR 412 (559)
Q Consensus 334 ~-~M~~~R~~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~llpdG~ 412 (559)
. .+...-......+..+++.++.++.+ + .+.+||+++. +-...-.-.... -....+.|||+
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~l~s~s~d-~------------~i~~~~~~~~---~~~~~~~gh~~~--v~~l~~spdg~ 337 (611)
T 1nr0_A 276 TIPVGTRIEDQQLGIIWTKQALVSISAN-G------------FINFVNPELG---SIDQVRYGHNKA--ITALSSSADGK 337 (611)
T ss_dssp EEECCSSGGGCEEEEEECSSCEEEEETT-C------------CEEEEETTTT---EEEEEECCCSSC--EEEEEECTTSS
T ss_pred eecCCCCccceeEEEEEcCCEEEEEeCC-C------------cEEEEeCCCC---CcceEEcCCCCC--EEEEEEeCCCC
Confidence 1 22111111111233478777777654 1 5789998876 432211111111 12345679999
Q ss_pred eEEeCCCCC
Q 048136 413 VFVGGSNDN 421 (559)
Q Consensus 413 Vlv~GG~~~ 421 (559)
.++.|+.+.
T Consensus 338 ~l~s~s~D~ 346 (611)
T 1nr0_A 338 TLFSADAEG 346 (611)
T ss_dssp EEEEEETTS
T ss_pred EEEEEeCCC
Confidence 999998654
No 104
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.50 E-value=0.22 Score=55.65 Aligned_cols=223 Identities=11% Similarity=0.062 Sum_probs=118.1
Q ss_pred eecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccc-cccccceEEEccCCcEEEEcCCCCCceeEE-cCCCCCCC
Q 048136 127 GLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALK-DGRWYATQALLADGSFLIFGGRDSFSYEYI-PAERTENA 204 (559)
Q Consensus 127 ~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~-~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~ 204 (559)
+.-+||+++++|+. + ..+.+||.. +.+.... +. ....-.+++..+||+.+++|+.++ .+.+| ..+++
T Consensus 20 ~~sp~~~~la~~~~-~--g~v~iwd~~-~~~~~~~---~~~~~~~v~~~~~s~~~~~l~~~~~dg-~i~vw~~~~~~--- 88 (814)
T 3mkq_A 20 DFHPTEPWVLTTLY-S--GRVEIWNYE-TQVEVRS---IQVTETPVRAGKFIARKNWIIVGSDDF-RIRVFNYNTGE--- 88 (814)
T ss_dssp EECSSSSEEEEEET-T--SEEEEEETT-TTEEEEE---EECCSSCEEEEEEEGGGTEEEEEETTS-EEEEEETTTCC---
T ss_pred EECCCCCEEEEEeC-C--CEEEEEECC-CCceEEE---EecCCCcEEEEEEeCCCCEEEEEeCCC-eEEEEECCCCc---
Confidence 45578999999886 2 479999987 5543221 22 112223455567899999998753 56667 44331
Q ss_pred cceeccccccccccccCCccceEEEeeCCcEEEEecC--cEEEeeCCCC-eEEEECCCCCCCCCcccCCCceeecccccc
Q 048136 205 YSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFANN--RSILLDPRAN-YVLREYPPLPGGARNYPSTSTSVLLPLKLY 281 (559)
Q Consensus 205 w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg~--~~e~yDp~t~-~W~~~~p~mp~~~~~~p~~g~~v~lpl~~~ 281 (559)
. ...+ ....+ .-..+...++|+.+++|+. .+.+||..++ .....+.. . .+....+...|
T Consensus 89 ~--~~~~-~~~~~-----~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~-------~--~~~v~~~~~~p- 150 (814)
T 3mkq_A 89 K--VVDF-EAHPD-----YIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEG-------H--EHFVMCVAFNP- 150 (814)
T ss_dssp E--EEEE-ECCSS-----CEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEEC-------C--SSCEEEEEEET-
T ss_pred E--EEEE-ecCCC-----CEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcC-------C--CCcEEEEEEEc-
Confidence 1 1111 11100 1112334568887777763 5789998876 33322210 0 01111111111
Q ss_pred cccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeeecCCCCcccccEEEee--CCeEEEEcCc
Q 048136 282 RDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTEKMPTPRVMSDGVLLP--TGDVLLINGA 359 (559)
Q Consensus 282 ~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~R~~~~av~Lp--dG~V~vvGG~ 359 (559)
.+++++++|+.+ .++..+|+......+.... ...+........| +|+.+++|+.
T Consensus 151 ------~~~~~l~~~~~d-----------------g~v~vwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~~~~~ 206 (814)
T 3mkq_A 151 ------KDPSTFASGCLD-----------------RTVKVWSLGQSTPNFTLTT-GQERGVNYVDYYPLPDKPYMITASD 206 (814)
T ss_dssp ------TEEEEEEEEETT-----------------SEEEEEETTCSSCSEEEEC-CCTTCCCEEEECCSTTCCEEEEECT
T ss_pred ------CCCCEEEEEeCC-----------------CeEEEEECCCCcceeEEec-CCCCCEEEEEEEECCCCCEEEEEeC
Confidence 156788887764 2344566543222333221 1111112233445 8999999876
Q ss_pred CCCCCCccCCCCCCcccEEEeCCCCCCCeEE-ecCCCCCCccceeeeEECCCCceEEeCCCCC
Q 048136 360 ELGSAGWKDADKPCFKPLLYKPSKPPGSRFT-ELAPSDIPRMYHSVANLLPDGRVFVGGSNDN 421 (559)
Q Consensus 360 ~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt-~~~~~~~~R~yhs~a~llpdG~Vlv~GG~~~ 421 (559)
+ | .+.+||..+. +-. .+... ...-......|||+++++|+...
T Consensus 207 d-g------------~i~~~d~~~~---~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~dg 250 (814)
T 3mkq_A 207 D-L------------TIKIWDYQTK---SCVATLEGH---MSNVSFAVFHPTLPIIISGSEDG 250 (814)
T ss_dssp T-S------------EEEEEETTTT---EEEEEEECC---SSCEEEEEECSSSSEEEEEETTS
T ss_pred C-C------------EEEEEECCCC---cEEEEEcCC---CCCEEEEEEcCCCCEEEEEeCCC
Confidence 4 1 6889998776 422 22111 11123456789999999988643
No 105
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.49 E-value=0.086 Score=59.40 Aligned_cols=232 Identities=11% Similarity=0.128 Sum_probs=118.9
Q ss_pred eEEEeCCCCCEEeCccCC--CcccccCeecCC--CcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccc-cccccceEEE
Q 048136 102 SVFYNVNTLQVTPLKVIT--DTWCSSGGLDVN--GNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALK-DGRWYATQAL 176 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~--~~~c~~~~~l~d--G~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~-~~R~y~s~~~ 176 (559)
..+||..++++..+.... .....+....++ |+.+++|+. + ..+.+||.. +.+|..... +. +...-.+++.
T Consensus 33 I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~-D--g~I~vwd~~-~~~~~~~~~-~~~h~~~V~~v~~ 107 (753)
T 3jro_A 33 IKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY-D--GKVLIWKEE-NGRWSQIAV-HAVHSASVNSVQW 107 (753)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEET-T--SCEEEEEEE-TTEEEEEEE-ECCCSSCEEEEEE
T ss_pred EEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeC-C--CeEEEEECC-CCccccccc-ccCCCCCeEEEEE
Confidence 567887766666554332 111122233355 899999987 3 478999988 777655432 32 2223334555
Q ss_pred ccC--CcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEee-------------CCcEEEEec
Q 048136 177 LAD--GSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVP-------------DGNLYIFAN 240 (559)
Q Consensus 177 L~d--G~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~-------------~G~iyv~Gg 240 (559)
.++ |+++++|+.++ .+.+| ...+. ......+ ..... .-..+...+ +|++++.|+
T Consensus 108 sp~~~~~~l~sgs~dg-~I~vwdl~~~~---~~~~~~~-~~~~~-----~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs 177 (753)
T 3jro_A 108 APHEYGPLLLVASSDG-KVSVVEFKENG---TTSPIII-DAHAI-----GVNSASWAPATIEEDGEHNGTKESRKFVTGG 177 (753)
T ss_dssp CCGGGCSEEEEEETTS-EEEEEECCSSS---CCCCEEE-ECCSS-----CEEEEEECCCC---------CGGGCCEEEEE
T ss_pred CCCCCCCEEEEEeCCC-cEEEEEeecCC---CcceeEe-ecCCC-----ceEEEEecCcccccccccccCCCCCEEEEEE
Confidence 666 88999998764 45566 33221 0000000 00000 000111222 577777776
Q ss_pred --CcEEEeeCCCC--eEEEECCCCCCCCCcccCCCceeecccccccccccccC---cEEEEEcCCCCccccccccccccc
Q 048136 241 --NRSILLDPRAN--YVLREYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVD---AEVLICGGSVPEAFYFGEVEKRLV 313 (559)
Q Consensus 241 --~~~e~yDp~t~--~W~~~~p~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~---gkI~v~GG~~~~~~~~~~~~~~~~ 313 (559)
..+.+||..++ .+. ....+.+ + .+....+... .+ ++++++||.+
T Consensus 178 ~dg~I~iwd~~~~~~~~~-~~~~~~~----h--~~~V~~l~~s--------p~~~~~~~l~s~s~D-------------- 228 (753)
T 3jro_A 178 ADNLVKIWKYNSDAQTYV-LESTLEG----H--SDWVRDVAWS--------PTVLLRSYLASVSQD-------------- 228 (753)
T ss_dssp TTSCEEEEEEETTTTEEE-EEEEECC----C--SSCEEEEEEC--------CCCSSSEEEEEEESS--------------
T ss_pred CCCeEEEEeccCCcccce-eeeeecC----C--CCcEEEEEec--------cCCCCCCEEEEEecC--------------
Confidence 35778887654 222 1111111 0 1111111111 14 7889998865
Q ss_pred cccCceEEEEecCCCCceeee--cC-CCCcccccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEE
Q 048136 314 PALDDCARMVVTSPDPVWTTE--KM-PTPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFT 390 (559)
Q Consensus 314 ~a~~s~~~~d~~~~~~~W~~~--~M-~~~R~~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt 390 (559)
..+..+|+......+... .. .....-.+...-|||+.+++||.+ | .+.+||..++ .+|.
T Consensus 229 ---g~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~D-g------------~I~vwd~~~~--~~~~ 290 (753)
T 3jro_A 229 ---RTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGD-N------------KVTLWKENLE--GKWE 290 (753)
T ss_dssp ---SCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSS-S------------CEECCBCCSS--SCCB
T ss_pred ---CEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCC-C------------EEEEEecCCC--CCcc
Confidence 235567776532333322 11 111111223456899999998865 2 5788888753 2676
Q ss_pred ecCCC
Q 048136 391 ELAPS 395 (559)
Q Consensus 391 ~~~~~ 395 (559)
.....
T Consensus 291 ~~~~~ 295 (753)
T 3jro_A 291 PAGEV 295 (753)
T ss_dssp CCCCB
T ss_pred ccccc
Confidence 65444
No 106
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.46 E-value=0.93 Score=46.06 Aligned_cols=214 Identities=15% Similarity=0.113 Sum_probs=108.9
Q ss_pred eeEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccc-cccccceEEEccC
Q 048136 101 HSVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALK-DGRWYATQALLAD 179 (559)
Q Consensus 101 ~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~-~~R~y~s~~~L~d 179 (559)
...+||..+++....-..+.... ..+..+++++++|+.. ..+.+||.. ...-. ... +. +...-.+.+..++
T Consensus 157 ~i~iwd~~~~~~~~~~~~~~~~v--~~~~~~~~~l~~~~~d---g~i~i~d~~-~~~~~-~~~-~~~~~~~v~~~~~~~~ 228 (401)
T 4aez_A 157 LVDIYDVESQTKLRTMAGHQARV--GCLSWNRHVLSSGSRS---GAIHHHDVR-IANHQ-IGT-LQGHSSEVCGLAWRSD 228 (401)
T ss_dssp CEEEEETTTCCEEEEECCCSSCE--EEEEEETTEEEEEETT---SEEEEEETT-SSSCE-EEE-EECCSSCEEEEEECTT
T ss_pred eEEEEECcCCeEEEEecCCCCce--EEEEECCCEEEEEcCC---CCEEEEecc-cCcce-eeE-EcCCCCCeeEEEEcCC
Confidence 36788887766433222222111 1222378899998863 588999986 32211 111 21 2222334556668
Q ss_pred CcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeC-CcEEEEec----CcEEEeeCCCCeE
Q 048136 180 GSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPD-GNLYIFAN----NRSILLDPRANYV 253 (559)
Q Consensus 180 G~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~-G~iyv~Gg----~~~e~yDp~t~~W 253 (559)
|+.+++|+.++ .+.+| ..+. .....+ .... ..-..+...++ ..+++.|+ ..+.+||..+++.
T Consensus 229 ~~~l~s~~~d~-~v~iwd~~~~-----~~~~~~-~~~~-----~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~ 296 (401)
T 4aez_A 229 GLQLASGGNDN-VVQIWDARSS-----IPKFTK-TNHN-----AAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGAR 296 (401)
T ss_dssp SSEEEEEETTS-CEEEEETTCS-----SEEEEE-CCCS-----SCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCE
T ss_pred CCEEEEEeCCC-eEEEccCCCC-----CccEEe-cCCc-----ceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCE
Confidence 99999998764 46667 3332 111111 1100 01112333454 46777764 4678999988765
Q ss_pred EEECCCCCCCCCcccCCCceeecccccccccccccCcEEEEE-cCCCCccccccccccccccccCceEEEEecCCCCcee
Q 048136 254 LREYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLIC-GGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWT 332 (559)
Q Consensus 254 ~~~~p~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~-GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~ 332 (559)
...+.. . .+ -.++.+ . .+++.+++ +|... ..+..||+.. ....
T Consensus 297 ~~~~~~-~-----~~--v~~~~~--s--------~~~~~l~~~~g~~d----------------g~i~v~~~~~--~~~~ 340 (401)
T 4aez_A 297 VNTVDA-G-----SQ--VTSLIW--S--------PHSKEIMSTHGFPD----------------NNLSIWSYSS--SGLT 340 (401)
T ss_dssp EEEEEC-S-----SC--EEEEEE--C--------SSSSEEEEEECTTT----------------CEEEEEEEET--TEEE
T ss_pred EEEEeC-C-----Cc--EEEEEE--C--------CCCCeEEEEeecCC----------------CcEEEEecCC--ccce
Confidence 543310 0 00 111111 1 14444444 34321 2345566553 2233
Q ss_pred ee-c--CCCCcccccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCC
Q 048136 333 TE-K--MPTPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKP 384 (559)
Q Consensus 333 ~~-~--M~~~R~~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~ 384 (559)
.. . -...+... ...-|||+.++++|.+ | .+.+||..+.
T Consensus 341 ~~~~~~~h~~~v~~-~~~s~dg~~l~s~~~d-g------------~i~iw~~~~~ 381 (401)
T 4aez_A 341 KQVDIPAHDTRVLY-SALSPDGRILSTAASD-E------------NLKFWRVYDG 381 (401)
T ss_dssp EEEEEECCSSCCCE-EEECTTSSEEEEECTT-S------------EEEEEECCC-
T ss_pred eEEEecCCCCCEEE-EEECCCCCEEEEEeCC-C------------cEEEEECCCC
Confidence 22 2 22333443 4567899999998865 2 6789998776
No 107
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.45 E-value=0.044 Score=55.11 Aligned_cols=190 Identities=14% Similarity=0.073 Sum_probs=100.2
Q ss_pred eEEEccCCcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEec--CcEEEeeCC
Q 048136 173 TQALLADGSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN--NRSILLDPR 249 (559)
Q Consensus 173 s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg--~~~e~yDp~ 249 (559)
.++.-+||++++.||.+. ++.+| ...+ .+.....+..... ..-..+...++|+.++.|+ ..+.+||..
T Consensus 21 ~l~~sp~g~~las~~~D~-~i~iw~~~~~---~~~~~~~~~~~h~-----~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~ 91 (345)
T 3fm0_A 21 FLAWNPAGTLLASCGGDR-RIRIWGTEGD---SWICKSVLSEGHQ-----RTVRKVAWSPCGNYLASASFDATTCIWKKN 91 (345)
T ss_dssp EEEECTTSSCEEEEETTS-CEEEEEEETT---EEEEEEEECSSCS-----SCEEEEEECTTSSEEEEEETTSCEEEEEEC
T ss_pred EEEECCCCCEEEEEcCCC-eEEEEEcCCC---cceeeeeeccccC-----CcEEEEEECCCCCEEEEEECCCcEEEEEcc
Confidence 455567899999988764 56677 3332 1211111111110 0111233356899998886 457889888
Q ss_pred CCeEEEECCCCCCCCCcccCCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCC
Q 048136 250 ANYVLREYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDP 329 (559)
Q Consensus 250 t~~W~~~~p~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~ 329 (559)
++.+. .+..+.+. .+....+... .++++++.|+.+ .++..+|+... .
T Consensus 92 ~~~~~-~~~~~~~h------~~~v~~v~~s--------p~~~~l~s~s~D-----------------~~v~iwd~~~~-~ 138 (345)
T 3fm0_A 92 QDDFE-CVTTLEGH------ENEVKSVAWA--------PSGNLLATCSRD-----------------KSVWVWEVDEE-D 138 (345)
T ss_dssp CC-EE-EEEEECCC------SSCEEEEEEC--------TTSSEEEEEETT-----------------SCEEEEEECTT-S
T ss_pred CCCeE-EEEEccCC------CCCceEEEEe--------CCCCEEEEEECC-----------------CeEEEEECCCC-C
Confidence 77543 12112210 1111111111 267888888765 23455666531 2
Q ss_pred ceeee---cCCCCcccccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCccceeeeE
Q 048136 330 VWTTE---KMPTPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVAN 406 (559)
Q Consensus 330 ~W~~~---~M~~~R~~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~ 406 (559)
.+... .-....... ....|+|++++.|+.+ + ++.+||..+. +|.....+.--...-....
T Consensus 139 ~~~~~~~~~~h~~~v~~-~~~~p~~~~l~s~s~d-~------------~i~~w~~~~~---~~~~~~~~~~h~~~v~~l~ 201 (345)
T 3fm0_A 139 EYECVSVLNSHTQDVKH-VVWHPSQELLASASYD-D------------TVKLYREEED---DWVCCATLEGHESTVWSLA 201 (345)
T ss_dssp CEEEEEEECCCCSCEEE-EEECSSSSCEEEEETT-S------------CEEEEEEETT---EEEEEEEECCCSSCEEEEE
T ss_pred CeEEEEEecCcCCCeEE-EEECCCCCEEEEEeCC-C------------cEEEEEecCC---CEEEEEEecCCCCceEEEE
Confidence 22222 112222222 3456899999988765 1 6789998888 7764332211111112345
Q ss_pred ECCCCceEEeCCCCC
Q 048136 407 LLPDGRVFVGGSNDN 421 (559)
Q Consensus 407 llpdG~Vlv~GG~~~ 421 (559)
+.|||+.+++|+.+.
T Consensus 202 ~sp~g~~l~s~s~D~ 216 (345)
T 3fm0_A 202 FDPSGQRLASCSDDR 216 (345)
T ss_dssp ECTTSSEEEEEETTS
T ss_pred ECCCCCEEEEEeCCC
Confidence 679999999998653
No 108
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=96.43 E-value=0.61 Score=47.15 Aligned_cols=232 Identities=11% Similarity=0.092 Sum_probs=113.6
Q ss_pred ecCCCcEEEEcCCCC--------CCCeEEEEeCCC-CCCeec---CCC-ccccccccc-eEEEccCCcEEEEc-CCCCCc
Q 048136 128 LDVNGNLISTGGFLG--------GSRTTRYLWGCP-TCDWTE---YPT-ALKDGRWYA-TQALLADGSFLIFG-GRDSFS 192 (559)
Q Consensus 128 ~l~dG~i~v~GG~~~--------g~~~v~~ydp~~-t~~W~~---~~~-~m~~~R~y~-s~~~L~dG~VyvvG-G~~~~s 192 (559)
+-.++.+++.|.... ..+.+++|+... ...... ..- .......|. .++.-+||+.++++ |....+
T Consensus 79 ~~~~~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~ 158 (365)
T 4h5i_A 79 IDASKGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAI 158 (365)
T ss_dssp EEEETTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCE
T ss_pred EEeCCCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCE
Confidence 345788888876531 125677776431 222111 110 011111122 34555799887654 444456
Q ss_pred eeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEec-CcEEEeeCCCCeEEEECCCCCCCCCcccCC
Q 048136 193 YEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN-NRSILLDPRANYVLREYPPLPGGARNYPST 270 (559)
Q Consensus 193 ~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg-~~~e~yDp~t~~W~~~~p~mp~~~~~~p~~ 270 (559)
+.+| +.+. .....+... . ..+ .+...+||++++.+. ....+++..++........ .. ....
T Consensus 159 i~iwd~~~~-----~~~~~~~~~--~----~V~-~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~-~~--~~~~-- 221 (365)
T 4h5i_A 159 MRIIDPSDL-----TEKFEIETR--G----EVK-DLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTD-FD--KNWS-- 221 (365)
T ss_dssp EEEEETTTT-----EEEEEEECS--S----CCC-EEEECTTSSEEEEECSSCEEEEETTTCCEEEEECC-CC--TTEE--
T ss_pred EEEeECCCC-----cEEEEeCCC--C----ceE-EEEEccCCceEEeccceeEEEEEeccCcceeeeec-CC--CCCC--
Confidence 7778 5543 111111110 0 111 234467999998875 4577888877764422211 10 0110
Q ss_pred CceeecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeee---cCC--CCcccccE
Q 048136 271 STSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTE---KMP--TPRVMSDG 345 (559)
Q Consensus 271 g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~---~M~--~~R~~~~a 345 (559)
-.++.+ . .+++.++.++.+.+. ...+..+|... ..+... .+. ...... .
T Consensus 222 v~~v~f--s--------pdg~~l~~~s~d~~~-------------~~~i~~~~~~~--~~~~~~~~~~~~~~~~~V~~-~ 275 (365)
T 4h5i_A 222 LSKINF--I--------ADDTVLIAASLKKGK-------------GIVLTKISIKS--GNTSVLRSKQVTNRFKGITS-M 275 (365)
T ss_dssp EEEEEE--E--------ETTEEEEEEEESSSC-------------CEEEEEEEEET--TEEEEEEEEEEESSCSCEEE-E
T ss_pred EEEEEE--c--------CCCCEEEEEecCCcc-------------eeEEeeccccc--ceecceeeeeecCCCCCeEe-E
Confidence 011111 1 267888887654211 01122344332 122111 111 111111 3
Q ss_pred EEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeE-EecCCCCCCccceeeeEECCCCceEEeCCCC
Q 048136 346 VLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRF-TELAPSDIPRMYHSVANLLPDGRVFVGGSND 420 (559)
Q Consensus 346 v~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~W-t~~~~~~~~R~yhs~a~llpdG~Vlv~GG~~ 420 (559)
..-|||+++++|+.+. ++.+||.++. +- ..+........ ......|||+.|+.|+.+
T Consensus 276 ~~Spdg~~lasgs~D~-------------~V~iwd~~~~---~~~~~~~~gH~~~V--~~v~fSpdg~~laS~S~D 333 (365)
T 4h5i_A 276 DVDMKGELAVLASNDN-------------SIALVKLKDL---SMSKIFKQAHSFAI--TEVTISPDSTYVASVSAA 333 (365)
T ss_dssp EECTTSCEEEEEETTS-------------CEEEEETTTT---EEEEEETTSSSSCE--EEEEECTTSCEEEEEETT
T ss_pred EECCCCCceEEEcCCC-------------EEEEEECCCC---cEEEEecCcccCCE--EEEEECCCCCEEEEEeCC
Confidence 4568999999988651 6899998876 42 22212111222 235578999999999864
No 109
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.41 E-value=0.31 Score=49.85 Aligned_cols=138 Identities=11% Similarity=0.031 Sum_probs=72.8
Q ss_pred eeEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCC
Q 048136 101 HSVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADG 180 (559)
Q Consensus 101 ~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG 180 (559)
...+||+.+++....-..+.......+..++|+.+++.+..+ ..+.+||+. +.+.... +.....-.+++.-++|
T Consensus 192 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~i~~~d~~-~~~~~~~---~~~~~~~~~~~~~~~g 265 (433)
T 3bws_A 192 AVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWIS--EDISVIDRK-TKLEIRK---TDKIGLPRGLLLSKDG 265 (433)
T ss_dssp EEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTT--TEEEEEETT-TTEEEEE---CCCCSEEEEEEECTTS
T ss_pred EEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCC--CcEEEEECC-CCcEEEE---ecCCCCceEEEEcCCC
Confidence 367899887765432222222223345567887554444322 589999998 6654332 2222223345556788
Q ss_pred cEEEEcCCCC-------CceeEE-cCCCCCCCcceeccccccccccccCCccc-eEEEeeCCc-EEEEec--CcEEEeeC
Q 048136 181 SFLIFGGRDS-------FSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYP-FVYLVPDGN-LYIFAN--NRSILLDP 248 (559)
Q Consensus 181 ~VyvvGG~~~-------~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp-~~~~l~~G~-iyv~Gg--~~~e~yDp 248 (559)
+.+++++... ..+.+| +.+++ . ....... ..+ .+...++|+ +|+.+. ..+.+||.
T Consensus 266 ~~l~~~~~~~~~~~~~dg~i~~~d~~~~~-----~-~~~~~~~-------~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~ 332 (433)
T 3bws_A 266 KELYIAQFSASNQESGGGRLGIYSMDKEK-----L-IDTIGPP-------GNKRHIVSGNTENKIYVSDMCCSKIEVYDL 332 (433)
T ss_dssp SEEEEEEEESCTTCSCCEEEEEEETTTTE-----E-EEEEEEE-------ECEEEEEECSSTTEEEEEETTTTEEEEEET
T ss_pred CEEEEEECCCCccccCCCeEEEEECCCCc-----E-EeeccCC-------CCcceEEECCCCCEEEEEecCCCEEEEEEC
Confidence 7777776422 234466 44321 1 1111000 011 233456784 777754 46889999
Q ss_pred CCCeEEEEC
Q 048136 249 RANYVLREY 257 (559)
Q Consensus 249 ~t~~W~~~~ 257 (559)
.+++....+
T Consensus 333 ~~~~~~~~~ 341 (433)
T 3bws_A 333 KEKKVQKSI 341 (433)
T ss_dssp TTTEEEEEE
T ss_pred CCCcEEEEe
Confidence 988765434
No 110
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=96.38 E-value=0.097 Score=56.76 Aligned_cols=277 Identities=9% Similarity=-0.005 Sum_probs=134.5
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeC--CCCCCeecCCCccccccccceEEEcc-
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWG--CPTCDWTEYPTALKDGRWYATQALLA- 178 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp--~~t~~W~~~~~~m~~~R~y~s~~~L~- 178 (559)
+.+||..+++....-..... ....++.+||+.+.+++. + ..+.+||. . +.+ .+.. +....+-.+++.-+
T Consensus 161 V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~-d--~~V~v~D~~~~-t~~--~~~~-i~~g~~p~~va~sp~ 232 (543)
T 1nir_A 161 IALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGR-D--ARIDMIDLWAK-EPT--KVAE-IKIGIEARSVESSKF 232 (543)
T ss_dssp EEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEET-T--SEEEEEETTSS-SCE--EEEE-EECCSEEEEEEECCS
T ss_pred EEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECC-C--CeEEEEECcCC-CCc--EEEE-EecCCCcceEEeCCC
Confidence 67889988876432221111 233457789987777765 2 68999999 5 433 2222 44444444566666
Q ss_pred ---CCcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccc---cCCccceEEEeeCCcEEEEec---CcEEEeeC
Q 048136 179 ---DGSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVL---ENNLYPFVYLVPDGNLYIFAN---NRSILLDP 248 (559)
Q Consensus 179 ---dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~---~~~~yp~~~~l~~G~iyv~Gg---~~~e~yDp 248 (559)
||+.++++.....++.+| ..+.+ -....+......+.. +...-......++++.+++.. ..+.++|.
T Consensus 233 ~~~dg~~l~v~~~~~~~v~v~D~~t~~---~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~ 309 (543)
T 1nir_A 233 KGYEDRYTIAGAYWPPQFAIMDGETLE---PKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNY 309 (543)
T ss_dssp TTCTTTEEEEEEEESSEEEEEETTTCC---EEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEEC
T ss_pred cCCCCCEEEEEEccCCeEEEEeccccc---cceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEe
Confidence 898777776554566667 44331 111111100000000 000011223345566555543 45788888
Q ss_pred CCCeEE--EECCCCCCCCCcccCCCceeecccccccccccccCcE-EEEEcCCCCccccccccccccccccCceEEEEec
Q 048136 249 RANYVL--REYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAE-VLICGGSVPEAFYFGEVEKRLVPALDDCARMVVT 325 (559)
Q Consensus 249 ~t~~W~--~~~p~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gk-I~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~ 325 (559)
.+.+-. ..++ . ..+++. ...-| +++ +|+++.. .+++..+|+.
T Consensus 310 ~~~~~l~~~~i~---~--~~~~~~--~~~sp-----------dg~~l~va~~~-----------------~~~v~v~D~~ 354 (543)
T 1nir_A 310 KDIDNLTVTSIG---A--APFLHD--GGWDS-----------SHRYFMTAANN-----------------SNKVAVIDSK 354 (543)
T ss_dssp TTSSSCEEEEEE---C--CSSCCC--EEECT-----------TSCEEEEEEGG-----------------GTEEEEEETT
T ss_pred cCCCcceeEEec---c--CcCccC--ceECC-----------CCCEEEEEecC-----------------CCeEEEEECC
Confidence 764311 1121 1 112321 12211 555 4444321 1345556655
Q ss_pred CCCCceee--e--cCCCCcccccEEEeeC-CeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCC--CCeEEecCCCCCC
Q 048136 326 SPDPVWTT--E--KMPTPRVMSDGVLLPT-GDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPP--GSRFTELAPSDIP 398 (559)
Q Consensus 326 ~~~~~W~~--~--~M~~~R~~~~av~Lpd-G~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~--g~~Wt~~~~~~~~ 398 (559)
+ .+-.. . .+|.+-...+ ..-|+ |++|+.+.... .++.+||.++.. ...|+.+..++..
T Consensus 355 t--g~l~~~i~~g~~ph~g~g~~-~~~p~~g~~~~s~~~~d------------~~V~v~d~~~~~~~~~~~~~v~~l~~~ 419 (543)
T 1nir_A 355 D--RRLSALVDVGKTPHPGRGAN-FVHPKYGPVWSTSHLGD------------GSISLIGTDPKNHPQYAWKKVAELQGQ 419 (543)
T ss_dssp T--TEEEEEEECSSSBCCTTCEE-EEETTTEEEEEEEBSSS------------SEEEEEECCTTTCTTTBTSEEEEEECS
T ss_pred C--CeEEEeeccCCCCCCCCCcc-cCCCCCccEEEeccCCC------------ceEEEEEeCCCCCchhcCeEEEEEEcC
Confidence 3 22111 1 3444422222 34466 88998874321 167888877621 1136655443332
Q ss_pred ccceeeeEECCCCceEEeCCCCCCCCcccCCCCCcceeeEEcCCCCC
Q 048136 399 RMYHSVANLLPDGRVFVGGSNDNDGYQEWAKFPTELRLEKFSPPYLA 445 (559)
Q Consensus 399 R~yhs~a~llpdG~Vlv~GG~~~~~~~~~~~~~~~~~~E~y~Ppyl~ 445 (559)
...--...+-|||+-+.++...+... + ...+|.+|+...+.
T Consensus 420 g~~~~~v~~~pdg~~l~v~~~~~~~~----~--~~~~v~v~d~~~~~ 460 (543)
T 1nir_A 420 GGGSLFIKTHPKSSHLYVDTTFNPDA----R--ISQSVAVFDLKNLD 460 (543)
T ss_dssp CSCCCCEECCTTCCEEEECCTTCSSH----H--HHTCEEEEETTCTT
T ss_pred CCCceEEEcCCCCCcEEEecCCCCCc----c--cCceEEEEECCCCC
Confidence 11111234579998887776322100 0 03378888887764
No 111
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=96.34 E-value=0.88 Score=46.30 Aligned_cols=137 Identities=13% Similarity=0.045 Sum_probs=72.6
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEcc-CC
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLA-DG 180 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~-dG 180 (559)
..+||..+++....-..+..........++|+.+++|+. + ..+++||.. +.+.... +.....-.+++..+ ||
T Consensus 147 i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~-d--~~v~iwd~~-~~~~~~~---~~~~~~v~~~~~~~~~~ 219 (393)
T 1erj_A 147 IRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSG-D--RTVRIWDLR-TGQCSLT---LSIEDGVTTVAVSPGDG 219 (393)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET-T--SEEEEEETT-TTEEEEE---EECSSCEEEEEECSTTC
T ss_pred EEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecC-C--CcEEEEECC-CCeeEEE---EEcCCCcEEEEEECCCC
Confidence 678998877654332223322223445679999999886 3 589999987 5543321 22222233444455 89
Q ss_pred cEEEEcCCCCCceeEE-cCCCCCCCcceeccccccc-cccccCCccceEEEeeCCcEEEEec--CcEEEeeCCCC
Q 048136 181 SFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDT-YDVLENNLYPFVYLVPDGNLYIFAN--NRSILLDPRAN 251 (559)
Q Consensus 181 ~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~-~d~~~~~~yp~~~~l~~G~iyv~Gg--~~~e~yDp~t~ 251 (559)
++++.|+.++ .+.+| ..++. -.......... ..+ ...-..+...++|+.++.|+ ..+.+||..+.
T Consensus 220 ~~l~~~s~d~-~v~iwd~~~~~---~~~~~~~~~~~~~~h--~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~ 288 (393)
T 1erj_A 220 KYIAAGSLDR-AVRVWDSETGF---LVERLDSENESGTGH--KDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNA 288 (393)
T ss_dssp CEEEEEETTS-CEEEEETTTCC---EEEEEC------CCC--SSCEEEEEECTTSSEEEEEETTSEEEEEEC---
T ss_pred CEEEEEcCCC-cEEEEECCCCc---EEEeecccccCCCCC--CCCEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 9999998764 46777 44331 11001000000 000 00011233456899888886 35788988754
No 112
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=96.32 E-value=0.075 Score=52.56 Aligned_cols=228 Identities=9% Similarity=0.066 Sum_probs=114.8
Q ss_pred eecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccc-cccccceEEEccCCcEEEEcCCCCCceeEE-cCCCCCCC
Q 048136 127 GLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALK-DGRWYATQALLADGSFLIFGGRDSFSYEYI-PAERTENA 204 (559)
Q Consensus 127 ~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~-~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~ 204 (559)
...+||+++++|+. + ..+.+||.. +.+-... +. +...-.+++..++|+.++.|+.++ .+.+| ..+.+
T Consensus 39 ~~s~~~~~l~~~~~-d--g~i~vwd~~-~~~~~~~---~~~h~~~v~~~~~~~~~~~l~s~~~dg-~i~iwd~~~~~--- 107 (369)
T 3zwl_B 39 KYNKEGDLLFSCSK-D--SSASVWYSL-NGERLGT---LDGHTGTIWSIDVDCFTKYCVTGSADY-SIKLWDVSNGQ--- 107 (369)
T ss_dssp EECTTSCEEEEEES-S--SCEEEEETT-TCCEEEE---ECCCSSCEEEEEECTTSSEEEEEETTT-EEEEEETTTCC---
T ss_pred EEcCCCCEEEEEeC-C--CEEEEEeCC-Cchhhhh---hhhcCCcEEEEEEcCCCCEEEEEeCCC-eEEEEECCCCc---
Confidence 44568999999886 2 478999987 5443221 22 122223455566899999888764 46666 43321
Q ss_pred cceeccccccccccccCCccceEEEeeCCcEEEEec-------CcEEEeeCCCCe----EEEECCCCCCCCCcccCCC--
Q 048136 205 YSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN-------NRSILLDPRANY----VLREYPPLPGGARNYPSTS-- 271 (559)
Q Consensus 205 w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg-------~~~e~yDp~t~~----W~~~~p~mp~~~~~~p~~g-- 271 (559)
...... .. ..-..+...++|+.++.++ ..+.+||..++. +. ....-+. .......+
T Consensus 108 ~~~~~~--~~-------~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~ 176 (369)
T 3zwl_B 108 CVATWK--SP-------VPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELT-KVSEEPI-HKIITHEGLD 176 (369)
T ss_dssp EEEEEE--CS-------SCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEE-EECSSCS-EEEECCTTCC
T ss_pred EEEEee--cC-------CCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeec-cccccee-eeccCCcCcc
Confidence 111111 00 0111233456888887764 356777765432 11 0100000 00000000
Q ss_pred ceeecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeeecCCCCcccccEEEeeCC
Q 048136 272 TSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTEKMPTPRVMSDGVLLPTG 351 (559)
Q Consensus 272 ~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~R~~~~av~LpdG 351 (559)
....+... .+++.+++|+.+ ..+..||+................... ....|||
T Consensus 177 ~~~~~~~~--------~~~~~l~~~~~d-----------------g~i~i~d~~~~~~~~~~~~~~~~~v~~-~~~~~~~ 230 (369)
T 3zwl_B 177 AATVAGWS--------TKGKYIIAGHKD-----------------GKISKYDVSNNYEYVDSIDLHEKSISD-MQFSPDL 230 (369)
T ss_dssp CEEEEEEC--------GGGCEEEEEETT-----------------SEEEEEETTTTTEEEEEEECCSSCEEE-EEECTTS
T ss_pred ceeEEEEc--------CCCCEEEEEcCC-----------------CEEEEEECCCCcEeEEEEecCCCceeE-EEECCCC
Confidence 11111111 267778887654 234556654310111111222222222 4556899
Q ss_pred eEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCccceeeeEECCCCceEEeCCCCC
Q 048136 352 DVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANLLPDGRVFVGGSNDN 421 (559)
Q Consensus 352 ~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~llpdG~Vlv~GG~~~ 421 (559)
+.+++++.+ + .+.+||..+. +....-.. . .......+.|||+.+++|+...
T Consensus 231 ~~l~~~~~d-~------------~i~v~d~~~~---~~~~~~~~--~-~~~~~~~~~~~~~~l~~~~~~~ 281 (369)
T 3zwl_B 231 TYFITSSRD-T------------NSFLVDVSTL---QVLKKYET--D-CPLNTAVITPLKEFIILGGGQE 281 (369)
T ss_dssp SEEEEEETT-S------------EEEEEETTTC---CEEEEEEC--S-SCEEEEEECSSSSEEEEEECCC
T ss_pred CEEEEecCC-c------------eEEEEECCCC---ceeeeecC--C-CCceeEEecCCCceEEEeecCC
Confidence 999988754 1 6789998876 33221111 1 1123466789999999988654
No 113
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=96.32 E-value=0.16 Score=50.26 Aligned_cols=111 Identities=13% Similarity=0.010 Sum_probs=59.9
Q ss_pred cCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCcccccc-ccceEEEcc--CCcEEEEcCCCCCceeEE-cCCCCCCC
Q 048136 129 DVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGR-WYATQALLA--DGSFLIFGGRDSFSYEYI-PAERTENA 204 (559)
Q Consensus 129 l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R-~y~s~~~L~--dG~VyvvGG~~~~s~E~y-P~~~~~~~ 204 (559)
-+||+.+++|+. | ..+++||.. +.+...+.. +.... .-.+++..+ +|++++.|+.+. ++.+| ..++ .
T Consensus 22 s~~g~~lasgs~-D--~~v~lwd~~-~~~~~~~~~-l~gH~~~V~~v~~~~~~~~~~l~s~s~D~-~v~iWd~~~~---~ 92 (316)
T 3bg1_A 22 DYYGTRLATCSS-D--RSVKIFDVR-NGGQILIAD-LRGHEGPVWQVAWAHPMYGNILASCSYDR-KVIIWREENG---T 92 (316)
T ss_dssp CGGGCEEEEEET-T--TEEEEEEEE-TTEEEEEEE-EECCSSCEEEEEECCGGGSSCEEEEETTS-CEEEECCSSS---C
T ss_pred cCCCCEEEEEeC-C--CeEEEEEec-CCCcEEEEE-EcCCCccEEEEEeCCCCCCCEEEEEECCC-EEEEEECCCC---c
Confidence 468999999986 3 589999987 554322221 32211 112233222 478888888764 56777 4432 1
Q ss_pred cceeccccccccccccCCccceEEEeeC--CcEEEEecC--cEEEeeCCCC-eEE
Q 048136 205 YSIPFQFLRDTYDVLENNLYPFVYLVPD--GNLYIFANN--RSILLDPRAN-YVL 254 (559)
Q Consensus 205 w~~~~p~l~~~~d~~~~~~yp~~~~l~~--G~iyv~Gg~--~~e~yDp~t~-~W~ 254 (559)
+.....+ ....+ .--.+...++ |++++.|+. .+.+||..++ .|.
T Consensus 93 ~~~~~~~-~~h~~-----~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~ 141 (316)
T 3bg1_A 93 WEKSHEH-AGHDS-----SVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWE 141 (316)
T ss_dssp CCEEEEE-CCCSS-----CCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEE
T ss_pred ceEEEEc-cCCCC-----ceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcc
Confidence 2222111 11100 1112233455 788888863 5788888765 464
No 114
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=96.31 E-value=0.49 Score=45.62 Aligned_cols=132 Identities=11% Similarity=-0.006 Sum_probs=71.9
Q ss_pred eEEEeCCCCCEEeCccC--CCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccC
Q 048136 102 SVFYNVNTLQVTPLKVI--TDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLAD 179 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~--~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~d 179 (559)
+.+||..+++....-.. +..........++|+.+++|+. + ..+++||.. +.+-... +....... .+.-.+
T Consensus 47 V~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~-D--g~v~iw~~~-~~~~~~~---~~~h~~~~-~~~~~~ 118 (318)
T 4ggc_A 47 VYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTS-S--AEVQLWDVQ-QQKRLRN---MTSHSARV-GSLSWN 118 (318)
T ss_dssp EEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEET-T--SEEEEEETT-TTEEEEE---EECCSSCE-EEEEEE
T ss_pred EEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEEC-C--CcEEEeecC-CceeEEE---ecCccceE-EEeecC
Confidence 78999999887654333 2222334456789999999987 3 589999987 5543221 22111111 222336
Q ss_pred CcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEecC--cEEEeeCCCCe
Q 048136 180 GSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFANN--RSILLDPRANY 252 (559)
Q Consensus 180 G~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg~--~~e~yDp~t~~ 252 (559)
+++++.|+.+.. ...+ .... ......+ .... .........++|++++.++. .+.+||..+++
T Consensus 119 ~~~l~s~~~~~~-~~~~~~~~~----~~~~~~~-~~~~-----~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 183 (318)
T 4ggc_A 119 SYILSSGSRSGH-IHHHDVRVA----EHHVATL-SGHS-----QEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGE 183 (318)
T ss_dssp TTEEEEEETTSE-EEEEETTSS----SCEEEEE-ECCS-----SCEEEEEECTTSSEEEEEETTSCEEEEESSCBT
T ss_pred CCEEEEEecCCc-eEeeecCCC----ceeEEEE-cCcc-----CceEEEEEcCCCCEEEEEecCcceeEEECCCCc
Confidence 788888876542 2233 2221 1111111 1100 11112334458888887763 57889987653
No 115
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.30 E-value=1.1 Score=45.11 Aligned_cols=242 Identities=12% Similarity=0.098 Sum_probs=114.2
Q ss_pred eEEEeCCCCC--EEeCccCC-------CcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCC--CeecCCCccccccc
Q 048136 102 SVFYNVNTLQ--VTPLKVIT-------DTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTC--DWTEYPTALKDGRW 170 (559)
Q Consensus 102 ~~~yDp~t~~--w~~~~~~~-------~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~--~W~~~~~~m~~~R~ 170 (559)
..+||+++++ |+.-.... .........+.+|+||+.... ..+..||+. +. .|+.-.. .. .
T Consensus 65 v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~----g~l~a~d~~-tG~~~W~~~~~---~~-~ 135 (376)
T 3q7m_A 65 VKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEK----AQVYALNTS-DGTVAWQTKVA---GE-A 135 (376)
T ss_dssp EEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETT----SEEEEEETT-TCCEEEEEECS---SC-C
T ss_pred EEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCC----CEEEEEECC-CCCEEEEEeCC---Cc-e
Confidence 5678887765 54322110 111223345567888875432 478999987 55 4764321 11 1
Q ss_pred cceEEEccCCcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEec-CcEEEeeC
Q 048136 171 YATQALLADGSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN-NRSILLDP 248 (559)
Q Consensus 171 y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg-~~~e~yDp 248 (559)
..+. ++.+|+||+.... ..+-.+ +++++ ..|....+..... .+.. ...+..+|.||+... ..+..||+
T Consensus 136 ~~~p-~~~~~~v~v~~~~--g~l~~~d~~tG~-~~W~~~~~~~~~~-----~~~~-~~~~~~~~~v~~g~~~g~l~~~d~ 205 (376)
T 3q7m_A 136 LSRP-VVSDGLVLIHTSN--GQLQALNEADGA-VKWTVNLDMPSLS-----LRGE-SAPTTAFGAAVVGGDNGRVSAVLM 205 (376)
T ss_dssp CSCC-EEETTEEEEECTT--SEEEEEETTTCC-EEEEEECCC----------CCC-CCCEEETTEEEECCTTTEEEEEET
T ss_pred EcCC-EEECCEEEEEcCC--CeEEEEECCCCc-EEEEEeCCCCcee-----ecCC-CCcEEECCEEEEEcCCCEEEEEEC
Confidence 1222 3347888775432 223444 55442 1243322110000 0000 111334777777443 35788999
Q ss_pred CCC--eEEEECCCCCCCCCccc----CCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEE
Q 048136 249 RAN--YVLREYPPLPGGARNYP----STSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARM 322 (559)
Q Consensus 249 ~t~--~W~~~~p~mp~~~~~~p----~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~ 322 (559)
+++ .|...... |.+..... .....++ .++.||+.+. + ..+.++
T Consensus 206 ~tG~~~w~~~~~~-~~~~~~~~~~~~~~~~p~~------------~~~~v~~~~~-~-----------------g~l~~~ 254 (376)
T 3q7m_A 206 EQGQMIWQQRISQ-ATGSTEIDRLSDVDTTPVV------------VNGVVFALAY-N-----------------GNLTAL 254 (376)
T ss_dssp TTCCEEEEEECCC------------CCCCCCEE------------ETTEEEEECT-T-----------------SCEEEE
T ss_pred CCCcEEEEEeccc-CCCCcccccccccCCCcEE------------ECCEEEEEec-C-----------------cEEEEE
Confidence 876 46543321 10000000 0011111 3677777642 1 134566
Q ss_pred EecCCCCceeeecCCCCcccccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCccce
Q 048136 323 VVTSPDPVWTTEKMPTPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYH 402 (559)
Q Consensus 323 d~~~~~~~W~~~~M~~~R~~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yh 402 (559)
|+.+....|+.. ... .. ..++.+++||+..... .+.+||+++.+ ..|+.-. +. .+...
T Consensus 255 d~~tG~~~w~~~-~~~---~~-~~~~~~~~l~~~~~~g--------------~l~~~d~~tG~-~~w~~~~-~~-~~~~~ 312 (376)
T 3q7m_A 255 DLRSGQIMWKRE-LGS---VN-DFIVDGNRIYLVDQND--------------RVMALTIDGGV-TLWTQSD-LL-HRLLT 312 (376)
T ss_dssp ETTTCCEEEEEC-CCC---EE-EEEEETTEEEEEETTC--------------CEEEEETTTCC-EEEEECT-TT-TSCCC
T ss_pred ECCCCcEEeecc-CCC---CC-CceEECCEEEEEcCCC--------------eEEEEECCCCc-EEEeecc-cC-CCccc
Confidence 765544567764 111 11 3455688998865321 46889998762 2587531 11 12222
Q ss_pred eeeEECCCCceEEeC
Q 048136 403 SVANLLPDGRVFVGG 417 (559)
Q Consensus 403 s~a~llpdG~Vlv~G 417 (559)
+.++ .+++||+..
T Consensus 313 ~~~~--~~~~l~v~~ 325 (376)
T 3q7m_A 313 SPVL--YNGNLVVGD 325 (376)
T ss_dssp CCEE--ETTEEEEEC
T ss_pred CCEE--ECCEEEEEe
Confidence 2233 378888764
No 116
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.29 E-value=0.27 Score=49.46 Aligned_cols=144 Identities=10% Similarity=-0.012 Sum_probs=72.6
Q ss_pred eEEEeCCCCC-------EEeCccCCCcccccCeecCC----C---cEEEEcCCCCCCCeEEEEeCCCCCC------eecC
Q 048136 102 SVFYNVNTLQ-------VTPLKVITDTWCSSGGLDVN----G---NLISTGGFLGGSRTTRYLWGCPTCD------WTEY 161 (559)
Q Consensus 102 ~~~yDp~t~~-------w~~~~~~~~~~c~~~~~l~d----G---~i~v~GG~~~g~~~v~~ydp~~t~~------W~~~ 161 (559)
..+||..+++ ...+. .+..........++ | +++++|+. + ..+++||.. +.+ +..+
T Consensus 38 i~iw~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~-d--g~i~iw~~~-~~~~~~~~~~~~~ 112 (397)
T 1sq9_A 38 LKVWDNKLLDNENPKDKSYSHF-VHKSGLHHVDVLQAIERDAFELCLVATTSF-S--GDLLFYRIT-REDETKKVIFEKL 112 (397)
T ss_dssp EEEEESBCCTTCCGGGGEEEEE-CCTTCEEEEEEEEEEETTTEEEEEEEEEET-T--SCEEEEEEE-ECTTTCCEEEEEE
T ss_pred EEEEECCCcccccCCCcceEEe-cCCCcEEEEEEecccccCCccccEEEEEcC-C--CCEEEEEcc-CCcccccccceee
Confidence 6788888776 22222 12222223344566 8 89999886 3 478888876 444 5544
Q ss_pred CCcccc---ccccceEEEc----cCCcE-EEEcCCCCCceeEE-cCC------CCCCCcceeccccc-----cccccccC
Q 048136 162 PTALKD---GRWYATQALL----ADGSF-LIFGGRDSFSYEYI-PAE------RTENAYSIPFQFLR-----DTYDVLEN 221 (559)
Q Consensus 162 ~~~m~~---~R~y~s~~~L----~dG~V-yvvGG~~~~s~E~y-P~~------~~~~~w~~~~p~l~-----~~~d~~~~ 221 (559)
.. ... ...-.+++.. ++++. +++|+.++ .+.+| ... .....|.....+.. .. ..
T Consensus 113 ~~-~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 186 (397)
T 1sq9_A 113 DL-LDSDMKKHSFWALKWGASNDRLLSHRLVATDVKG-TTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMT----PS 186 (397)
T ss_dssp CC-SCTTGGGSCEEEEEEECCC----CEEEEEEETTS-CEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSS----SC
T ss_pred cc-cccccCCCcEEEEEEeeccCCCCceEEEEEeCCC-cEEEEeCCccccccccceeeccCcceeeeeeccccC----CC
Confidence 32 110 1223345555 68888 88888764 45566 332 11011111001100 00 00
Q ss_pred CccceEEEeeCCcEEEEecC--cEEEeeCCCCeEEEEC
Q 048136 222 NLYPFVYLVPDGNLYIFANN--RSILLDPRANYVLREY 257 (559)
Q Consensus 222 ~~yp~~~~l~~G~iyv~Gg~--~~e~yDp~t~~W~~~~ 257 (559)
..-..+...++| +++.|+. .+.+||..+.+....+
T Consensus 187 ~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~ 223 (397)
T 1sq9_A 187 QFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNF 223 (397)
T ss_dssp CCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEE
T ss_pred CCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEE
Confidence 111234455688 7777763 5789999988765433
No 117
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.28 E-value=2 Score=48.12 Aligned_cols=254 Identities=12% Similarity=0.032 Sum_probs=123.9
Q ss_pred eEEEeCCCCCEEeCcc---CCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCc-cccccccceEEEc
Q 048136 102 SVFYNVNTLQVTPLKV---ITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTA-LKDGRWYATQALL 177 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~---~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~-m~~~R~y~s~~~L 177 (559)
..+||+.+++++.... .......+-....+|+|++ |... ..+.+||+. +.+++..... +.. ..-.+.+.-
T Consensus 385 l~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~---~Gl~~~~~~-~~~~~~~~~~~~~~-~~v~~i~~d 458 (781)
T 3v9f_A 385 INVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYL---GNISYYNTR-LKKFQIIELEKNEL-LDVRVFYED 458 (781)
T ss_dssp EEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETT---EEEEEECSS-SCEEEECCSTTTCC-CCEEEEEEC
T ss_pred EEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-Eecc---CCEEEEcCC-CCcEEEeccCCCCC-CeEEEEEEC
Confidence 4568887777665421 1111111122334788887 3221 357889998 7888776421 221 122234444
Q ss_pred cCCcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEec-CcEEEeeCCCCeEEE
Q 048136 178 ADGSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN-NRSILLDPRANYVLR 255 (559)
Q Consensus 178 ~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg-~~~e~yDp~t~~W~~ 255 (559)
.+|++++... ..+-+| +.+++ +......... . ...+.-.....-.+|+|++... ....+||+.++++..
T Consensus 459 ~~g~lwigt~---~Gl~~~~~~~~~---~~~~~~~~~~--~-~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~ 529 (781)
T 3v9f_A 459 KNKKIWIGTH---AGVFVIDLASKK---VIHHYDTSNS--Q-LLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLVRK 529 (781)
T ss_dssp TTSEEEEEET---TEEEEEESSSSS---CCEEECTTTS--S-CSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEEEE
T ss_pred CCCCEEEEEC---CceEEEeCCCCe---EEecccCccc--c-cccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeEEE
Confidence 5688887543 234456 65542 3221111000 0 0001111222334788887653 568899999998873
Q ss_pred ECCCCCCCCCcccCCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeeec
Q 048136 256 EYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTEK 335 (559)
Q Consensus 256 ~~p~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~ 335 (559)
+.. +.+ .+......++. + .+|+|++... . +- ...|++.......|+.. ..
T Consensus 530 -~~~-~~~---l~~~~i~~i~~-------d--~~g~lWi~T~-~-Gl------v~~~d~~~~~~~~~~~~--------~g 579 (781)
T 3v9f_A 530 -FNQ-YEG---FCSNTINQIYR-------S--SKGQMWLATG-E-GL------VCFPSARNFDYQVFQRK--------EG 579 (781)
T ss_dssp -ECT-TTT---CSCSCEEEEEE-------C--TTSCEEEEET-T-EE------EEESCTTTCCCEEECGG--------GT
T ss_pred -ccC-CCC---CCCCeeEEEEE-------C--CCCCEEEEEC-C-Cc------eEEECCCCCcEEEcccc--------CC
Confidence 432 110 11001111111 1 2677777543 1 21 01223333333333211 13
Q ss_pred CCCCcccccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecC---CCCCCccceeeeEECCCCc
Q 048136 336 MPTPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELA---PSDIPRMYHSVANLLPDGR 412 (559)
Q Consensus 336 M~~~R~~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~---~~~~~R~yhs~a~llpdG~ 412 (559)
++...... .+.-.+|+|++.+. . -+.+|||++. +++... -++.......+++..+||+
T Consensus 580 l~~~~i~~-i~~d~~g~lW~~t~--~-------------Gl~~~~~~~~---~~~~~~~~dGl~~~~f~~~~~~~~~~G~ 640 (781)
T 3v9f_A 580 LPNTHIRA-ISEDKNGNIWASTN--T-------------GISCYITSKK---CFYTYDHSNNIPQGSFISGCVTKDHNGL 640 (781)
T ss_dssp CSCCCCCE-EEECSSSCEEEECS--S-------------CEEEEETTTT---EEEEECGGGTCCSSCEEEEEEEECTTSC
T ss_pred CCCceEEE-EEECCCCCEEEEcC--C-------------ceEEEECCCC---ceEEecccCCccccccccCceEECCCCE
Confidence 44433332 33445789988542 1 2468999988 776542 2333333334566788999
Q ss_pred eEEeCCC
Q 048136 413 VFVGGSN 419 (559)
Q Consensus 413 Vlv~GG~ 419 (559)
+|++|.+
T Consensus 641 l~~g~~~ 647 (781)
T 3v9f_A 641 IYFGSIN 647 (781)
T ss_dssp EEEEETT
T ss_pred EEEECCC
Confidence 9998754
No 118
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.28 E-value=0.23 Score=50.18 Aligned_cols=122 Identities=11% Similarity=0.094 Sum_probs=61.2
Q ss_pred cCeecCCCcEEEEcCCCCC---CCeEEEEeCCCCCC--eecCCCccccccccceEEEccCCcEEEEcCCCCCceeEE-cC
Q 048136 125 SGGLDVNGNLISTGGFLGG---SRTTRYLWGCPTCD--WTEYPTALKDGRWYATQALLADGSFLIFGGRDSFSYEYI-PA 198 (559)
Q Consensus 125 ~~~~l~dG~i~v~GG~~~g---~~~v~~ydp~~t~~--W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~ 198 (559)
+..+-+||++++.|+.... ..++++|+.. +.. .......+...-.-.+++..+|+++++.+ .+ .++.+| ..
T Consensus 47 ~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~-~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~s-~d-g~v~lWd~~ 123 (357)
T 4g56_B 47 AVRYRRDGALLLAASSLSSRTWGGSIWVFKDP-EGAPNESLCTAGVQTEAGVTDVAWVSEKGILVAS-DS-GAVELWEIL 123 (357)
T ss_dssp EEEECSSSCEEEEEECSSSSSCCEEEEEESSC-C---CGGGCSEEEECSSCEEEEEEETTTEEEEEE-TT-SCEEEC---
T ss_pred EEEECCCCCEEEEEcCCCCccccCeEEEEECC-CCCcceeEecccCCCCCCEEEEEEcCCCCEEEEE-CC-CEEEEeecc
Confidence 3456789999999985311 1367888765 322 11111101122222345556788876644 33 357777 43
Q ss_pred CCCCCCcceecccc-ccccccccCCccceEEEeeCCcEEEEecC--cEEEeeCCCCeEEEEC
Q 048136 199 ERTENAYSIPFQFL-RDTYDVLENNLYPFVYLVPDGNLYIFANN--RSILLDPRANYVLREY 257 (559)
Q Consensus 199 ~~~~~~w~~~~p~l-~~~~d~~~~~~yp~~~~l~~G~iyv~Gg~--~~e~yDp~t~~W~~~~ 257 (559)
+++ ......+. .... ..--.+...++|+.++.|+. .+.+||..+++....+
T Consensus 124 ~~~---~~~~~~~~~~~h~-----~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~ 177 (357)
T 4g56_B 124 EKE---SLLVNKFAKYEHD-----DIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSY 177 (357)
T ss_dssp --------CCCCEEECCCS-----SCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred ccc---eeEEEeeccCCCC-----CCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 321 11111110 0000 01112334579999988864 5889999998765433
No 119
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=96.22 E-value=0.55 Score=46.29 Aligned_cols=63 Identities=16% Similarity=0.122 Sum_probs=40.8
Q ss_pred CeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccc-cccccceEEEccCCcEEEEcCCCCCceeEE
Q 048136 126 GGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALK-DGRWYATQALLADGSFLIFGGRDSFSYEYI 196 (559)
Q Consensus 126 ~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~-~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y 196 (559)
..+.+||+.++.|+.. ..+++||.. +.+-.. . +. +...-.+++.-++++.++.|+.+. ++.+|
T Consensus 71 ~~~s~dg~~l~s~s~D---~~v~~wd~~-~~~~~~--~-~~~h~~~v~~~~~~~~~~~l~s~s~D~-~i~vw 134 (319)
T 3frx_A 71 CTLTADGAYALSASWD---KTLRLWDVA-TGETYQ--R-FVGHKSDVMSVDIDKKASMIISGSRDK-TIKVW 134 (319)
T ss_dssp EEECTTSSEEEEEETT---SEEEEEETT-TTEEEE--E-EECCSSCEEEEEECTTSCEEEEEETTS-CEEEE
T ss_pred EEECCCCCEEEEEeCC---CEEEEEECC-CCCeeE--E-EccCCCcEEEEEEcCCCCEEEEEeCCC-eEEEE
Confidence 3456799999999873 689999987 554221 1 21 111223445566889999888764 46666
No 120
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=96.14 E-value=0.3 Score=48.07 Aligned_cols=90 Identities=13% Similarity=-0.061 Sum_probs=52.1
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecC-CCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccc-cccccceEEEccC
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDV-NGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALK-DGRWYATQALLAD 179 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~-dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~-~~R~y~s~~~L~d 179 (559)
..+||..+++-...-..+..........+ +++++++|+. + ..+++||.. +.+-...-..+. ....-.+++..++
T Consensus 97 i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~-d--g~i~iwd~~-~~~~~~~~~~~~~~~~~v~~~~~~~~ 172 (366)
T 3k26_A 97 IRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSK-D--HALRLWNIQ-TDTLVAIFGGVEGHRDEVLSADYDLL 172 (366)
T ss_dssp EEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEET-T--SCEEEEETT-TTEEEEEECSTTSCSSCEEEEEECTT
T ss_pred EEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeC-C--CeEEEEEee-cCeEEEEecccccccCceeEEEECCC
Confidence 67888877654332222232233334556 8999999986 2 579999987 554322100011 2223334555678
Q ss_pred CcEEEEcCCCCCceeEE
Q 048136 180 GSFLIFGGRDSFSYEYI 196 (559)
Q Consensus 180 G~VyvvGG~~~~s~E~y 196 (559)
|+.++.|+.++ .+.+|
T Consensus 173 ~~~l~~~~~dg-~i~i~ 188 (366)
T 3k26_A 173 GEKIMSCGMDH-SLKLW 188 (366)
T ss_dssp SSEEEEEETTS-CEEEE
T ss_pred CCEEEEecCCC-CEEEE
Confidence 99999998764 45555
No 121
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=96.12 E-value=0.56 Score=48.45 Aligned_cols=132 Identities=13% Similarity=0.083 Sum_probs=69.9
Q ss_pred eEEEeCCCCCEEeCccCC--CcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCcccc-ccccceEEEcc
Q 048136 102 SVFYNVNTLQVTPLKVIT--DTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKD-GRWYATQALLA 178 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~--~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~-~R~y~s~~~L~ 178 (559)
+.+||..++....+...+ ...+....+.++|+++++|+. + ..+.+||.. ...-.. +.. ...-.+++.-+
T Consensus 189 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~-d--g~i~~wd~~-~~~~~~----~~~h~~~v~~v~~~p 260 (435)
T 4e54_B 189 TRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDN-V--GNVILLNMD-GKELWN----LRMHKKKVTHVALNP 260 (435)
T ss_dssp EEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECS-S--SBEEEEESS-SCBCCC----SBCCSSCEEEEEECT
T ss_pred EEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeC-C--CcEeeeccC-cceeEE----EecccceEEeeeecC
Confidence 678898877665544322 222223445679999999986 3 478999976 432211 221 12223344445
Q ss_pred CCc-EEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccce--EEEeeCCcEEEEecC--cEEEeeCCCCe
Q 048136 179 DGS-FLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPF--VYLVPDGNLYIFANN--RSILLDPRANY 252 (559)
Q Consensus 179 dG~-VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~--~~~l~~G~iyv~Gg~--~~e~yDp~t~~ 252 (559)
+++ +++.|+.+. .+.+| ....+ .. ..+.... . ...+- +...+||+.++.|+. .+.+||..+..
T Consensus 261 ~~~~~~~s~s~d~-~v~iwd~~~~~---~~--~~~~~~~-~----h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~ 329 (435)
T 4e54_B 261 CCDWFLATASVDQ-TVKIWDLRQVR---GK--ASFLYSL-P----HRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWD 329 (435)
T ss_dssp TCSSEEEEEETTS-BCCEEETTTCC---SS--SCCSBCC-B----CSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSS
T ss_pred CCceEEEEecCcc-eeeEEeccccc---cc--ceEEEee-e----ccccccceeECCCCCeeEEEcCCCEEEEEECCCCc
Confidence 665 666776653 46667 33221 10 1111000 0 00111 112368988888764 57889987654
No 122
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=96.11 E-value=1.2 Score=44.00 Aligned_cols=149 Identities=12% Similarity=0.037 Sum_probs=77.3
Q ss_pred eeEEEeCCCCCEEeCccCCC-cccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCC-e-ecCCCcc-----ccccccc
Q 048136 101 HSVFYNVNTLQVTPLKVITD-TWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCD-W-TEYPTAL-----KDGRWYA 172 (559)
Q Consensus 101 ~~~~yDp~t~~w~~~~~~~~-~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~-W-~~~~~~m-----~~~R~y~ 172 (559)
...++|+.+++......... ....+-++.++|+||++... ...+.+||+. ... . ..+.... ...-..+
T Consensus 70 ~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~---~~~v~~~~~~-g~~~~~~~~~~~~~~g~~~~~~~~P 145 (329)
T 3fvz_A 70 TILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVA---LHQVFKLDPH-SKEGPLLILGRSMQPGSDQNHFCQP 145 (329)
T ss_dssp CEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETT---TTEEEEECTT-CSSCCSEEESBTTBCCCSTTCCSSE
T ss_pred cEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECC---CCEEEEEeCC-CCeEEEEEecccCCCCCCccccCCC
Confidence 37889998888754322111 12223455679999998653 3579999987 431 1 1111000 0111123
Q ss_pred -eEEEcc-CCcEEEEcCCCCCceeEEcCCCCCCCcceecccccccccc--ccCCccceEE-EeeC-CcEEEEe--cCcEE
Q 048136 173 -TQALLA-DGSFLIFGGRDSFSYEYIPAERTENAYSIPFQFLRDTYDV--LENNLYPFVY-LVPD-GNLYIFA--NNRSI 244 (559)
Q Consensus 173 -s~~~L~-dG~VyvvGG~~~~s~E~yP~~~~~~~w~~~~p~l~~~~d~--~~~~~yp~~~-~l~~-G~iyv~G--g~~~e 244 (559)
++++-+ +|++||..+.....+.+|...++ ........ ...+. ...-.+|... +-++ |+||+.. +..+.
T Consensus 146 ~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~---~~~~~~~~-g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~ 221 (329)
T 3fvz_A 146 TDVAVEPSTGAVFVSDGYCNSRIVQFSPSGK---FVTQWGEE-SSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQ 221 (329)
T ss_dssp EEEEECTTTCCEEEEECSSCCEEEEECTTSC---EEEEECEE-CCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred cEEEEeCCCCeEEEEeCCCCCeEEEEcCCCC---EEEEeccC-CCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEE
Confidence 455555 79999998633344566632221 11111000 00000 0001234433 3456 8999985 45689
Q ss_pred EeeCCCCeEEEEC
Q 048136 245 LLDPRANYVLREY 257 (559)
Q Consensus 245 ~yDp~t~~W~~~~ 257 (559)
+||+.+++..+.+
T Consensus 222 ~~~~~~G~~~~~~ 234 (329)
T 3fvz_A 222 CFKTDTKEFVREI 234 (329)
T ss_dssp EEETTTCCEEEEE
T ss_pred EEECCCCcEEEEE
Confidence 9999977766544
No 123
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=96.09 E-value=0.36 Score=47.31 Aligned_cols=141 Identities=16% Similarity=0.060 Sum_probs=72.6
Q ss_pred eEEEeCCCCCEEeCccCCCc-ccccCeecCCCc-EEEEcCCCCCCCeEEEEeCCCCCCeecCCCcccc-----ccccceE
Q 048136 102 SVFYNVNTLQVTPLKVITDT-WCSSGGLDVNGN-LISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKD-----GRWYATQ 174 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~-~c~~~~~l~dG~-i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~-----~R~y~s~ 174 (559)
..+||+.+++....-..... .....++.+||+ +|+.+.. ...+.+||+. +.+-...-. +.. ...-...
T Consensus 23 v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~---~~~i~~~d~~-t~~~~~~~~-~~~~~~~~~~~~~~~ 97 (349)
T 1jmx_B 23 LHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH---YGDIYGIDLD-TCKNTFHAN-LSSVPGEVGRSMYSF 97 (349)
T ss_dssp EEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETT---TTEEEEEETT-TTEEEEEEE-SCCSTTEEEECSSCE
T ss_pred EEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCC---CCcEEEEeCC-CCcEEEEEE-cccccccccccccce
Confidence 57888888765432222221 122344567887 5666532 3579999998 665432111 111 1112345
Q ss_pred EEccCCcEEEEcCCC-----------CCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEecCc
Q 048136 175 ALLADGSFLIFGGRD-----------SFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFANNR 242 (559)
Q Consensus 175 ~~L~dG~VyvvGG~~-----------~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg~~ 242 (559)
+.-+||+.+++++.+ ...+.+| ..+++ -......... +. .-..+...+||++|+ ++..
T Consensus 98 ~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~---~~~~~~~~~~-----~~-~~~~~~~s~dg~l~~-~~~~ 167 (349)
T 1jmx_B 98 AISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL---EAKPVRTFPM-----PR-QVYLMRAADDGSLYV-AGPD 167 (349)
T ss_dssp EECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG---GBCCSEEEEC-----CS-SCCCEEECTTSCEEE-ESSS
T ss_pred EECCCCCEEEEEcccccccccccccCCCeEEEEECCCcc---ccceeeeccC-----CC-cccceeECCCCcEEE-ccCc
Confidence 666789777766633 2345555 43321 0000000000 00 111233567999777 4556
Q ss_pred EEEeeCCCCeEEEEC
Q 048136 243 SILLDPRANYVLREY 257 (559)
Q Consensus 243 ~e~yDp~t~~W~~~~ 257 (559)
+.+||..+++....+
T Consensus 168 i~~~d~~~~~~~~~~ 182 (349)
T 1jmx_B 168 IYKMDVKTGKYTVAL 182 (349)
T ss_dssp EEEECTTTCCEEEEE
T ss_pred EEEEeCCCCceeccc
Confidence 899999988765444
No 124
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.09 E-value=0.46 Score=44.84 Aligned_cols=88 Identities=8% Similarity=-0.047 Sum_probs=54.5
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCC-CCeecCCCccccccccceEEEccCC
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPT-CDWTEYPTALKDGRWYATQALLADG 180 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t-~~W~~~~~~m~~~R~y~s~~~L~dG 180 (559)
..+||+.+++.+.+... .........-+||+.+++++. ..+++||.. + .+...+.. ..........+.-+||
T Consensus 24 i~~~d~~~~~~~~~~~~-~~~v~~~~~spdg~~l~~~~~----~~i~~~d~~-~~~~~~~~~~-~~~~~~~~~~~~spdg 96 (297)
T 2ojh_A 24 IEIFNIRTRKMRVVWQT-PELFEAPNWSPDGKYLLLNSE----GLLYRLSLA-GDPSPEKVDT-GFATICNNDHGISPDG 96 (297)
T ss_dssp EEEEETTTTEEEEEEEE-SSCCEEEEECTTSSEEEEEET----TEEEEEESS-SCCSCEECCC-TTCCCBCSCCEECTTS
T ss_pred EEEEeCCCCceeeeccC-CcceEeeEECCCCCEEEEEcC----CeEEEEeCC-CCCCceEecc-ccccccccceEECCCC
Confidence 68899999887755432 222233456789998888763 489999998 7 66555432 2221223345566799
Q ss_pred cEEEEcCCCC-CceeEE
Q 048136 181 SFLIFGGRDS-FSYEYI 196 (559)
Q Consensus 181 ~VyvvGG~~~-~s~E~y 196 (559)
+.+++++... ....+|
T Consensus 97 ~~l~~~~~~~~~~~~l~ 113 (297)
T 2ojh_A 97 ALYAISDKVEFGKSAIY 113 (297)
T ss_dssp SEEEEEECTTTSSCEEE
T ss_pred CEEEEEEeCCCCcceEE
Confidence 8888877432 234444
No 125
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=96.06 E-value=0.1 Score=51.64 Aligned_cols=135 Identities=11% Similarity=0.029 Sum_probs=70.1
Q ss_pred eEEEeCCCCCE-EeCccC----CCcccccCeecCC----CcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccc-ccccc
Q 048136 102 SVFYNVNTLQV-TPLKVI----TDTWCSSGGLDVN----GNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALK-DGRWY 171 (559)
Q Consensus 102 ~~~yDp~t~~w-~~~~~~----~~~~c~~~~~l~d----G~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~-~~R~y 171 (559)
..+||..+++. ..+... +..........++ |+++++|+. + ..+.+||.. +.+-.. . +. ....-
T Consensus 46 v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~-d--g~i~v~d~~-~~~~~~--~-~~~~~~~i 118 (366)
T 3k26_A 46 VTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGS-R--GIIRIINPI-TMQCIK--H-YVGHGNAI 118 (366)
T ss_dssp EEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEET-T--CEEEEECTT-TCCEEE--E-EESCCSCE
T ss_pred EEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecC-C--CEEEEEEch-hceEee--e-ecCCCCcE
Confidence 57788775543 222211 1111222334445 778999886 3 489999987 544221 1 22 22222
Q ss_pred ceEEEcc-CCcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEec--CcEEEee
Q 048136 172 ATQALLA-DGSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN--NRSILLD 247 (559)
Q Consensus 172 ~s~~~L~-dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg--~~~e~yD 247 (559)
.+++..+ ++++++.|+.++ .+.+| ..+++ .......+.... ..-..+...++|+.++.|+ ..+.+||
T Consensus 119 ~~~~~~~~~~~~l~s~~~dg-~i~iwd~~~~~---~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~~dg~i~i~d 189 (366)
T 3k26_A 119 NELKFHPRDPNLLLSVSKDH-ALRLWNIQTDT---LVAIFGGVEGHR-----DEVLSADYDLLGEKIMSCGMDHSLKLWR 189 (366)
T ss_dssp EEEEECSSCTTEEEEEETTS-CEEEEETTTTE---EEEEECSTTSCS-----SCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEEEECCCCCCEEEEEeCCC-eEEEEEeecCe---EEEEeccccccc-----CceeEEEECCCCCEEEEecCCCCEEEEE
Confidence 3445556 889999988764 46667 43321 111110001100 0111223346888888876 4578899
Q ss_pred CCCCe
Q 048136 248 PRANY 252 (559)
Q Consensus 248 p~t~~ 252 (559)
..+.+
T Consensus 190 ~~~~~ 194 (366)
T 3k26_A 190 INSKR 194 (366)
T ss_dssp SCSHH
T ss_pred CCCCc
Confidence 88653
No 126
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=96.01 E-value=1 Score=45.11 Aligned_cols=112 Identities=10% Similarity=-0.010 Sum_probs=61.4
Q ss_pred CeecCCC-cEEEEcCCCCCCCeEEEEeCCCCCCeecCCCcc-ccccccceEEEcc-CCcEEEEcCCCCCceeEE-cCCCC
Q 048136 126 GGLDVNG-NLISTGGFLGGSRTTRYLWGCPTCDWTEYPTAL-KDGRWYATQALLA-DGSFLIFGGRDSFSYEYI-PAERT 201 (559)
Q Consensus 126 ~~~l~dG-~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m-~~~R~y~s~~~L~-dG~VyvvGG~~~~s~E~y-P~~~~ 201 (559)
....++| +++++|+. + ..+++||.. +.+....-. + .....-.+++..+ +++.++.|+.++ .+.+| ....
T Consensus 79 ~~~~~~~~~~l~s~~~-d--g~i~iwd~~-~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~l~s~~~d~-~i~iwd~~~~- 151 (383)
T 3ei3_B 79 LEWHPTHPTTVAVGSK-G--GDIILWDYD-VQNKTSFIQ-GMGPGDAITGMKFNQFNTNQLFVSSIRG-ATTLRDFSGS- 151 (383)
T ss_dssp EEECSSCTTEEEEEEB-T--SCEEEEETT-STTCEEEEC-CCSTTCBEEEEEEETTEEEEEEEEETTT-EEEEEETTSC-
T ss_pred EEECCCCCCEEEEEcC-C--CeEEEEeCC-Ccccceeee-cCCcCCceeEEEeCCCCCCEEEEEeCCC-EEEEEECCCC-
Confidence 3456788 89999886 3 479999988 665543311 1 1222223445555 568888887653 45666 3321
Q ss_pred CCCcceeccccccccccccCCccceEEEeeCCcEEEEecC--cEEEeeCCCCe
Q 048136 202 ENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFANN--RSILLDPRANY 252 (559)
Q Consensus 202 ~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg~--~~e~yDp~t~~ 252 (559)
.. ..+.... . ....-..+...++|++++.|+. .+.+||.....
T Consensus 152 --~~---~~~~~~~-~--~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 196 (383)
T 3ei3_B 152 --VI---QVFAKTD-S--WDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHE 196 (383)
T ss_dssp --EE---EEEECCC-C--SSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCE
T ss_pred --ce---EEEeccC-C--CCCCeEEEEECCCCCEEEEECCCCCEEEEECCCCE
Confidence 11 1110000 0 0001112344578999888864 57889986444
No 127
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=95.94 E-value=1.2 Score=42.54 Aligned_cols=108 Identities=8% Similarity=0.044 Sum_probs=57.6
Q ss_pred CCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCcEEEEcCCCCCceeEE-cCCCCCCCccee
Q 048136 130 VNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGSFLIFGGRDSFSYEYI-PAERTENAYSIP 208 (559)
Q Consensus 130 ~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~ 208 (559)
.+|+||+.+.. +...+.+||+. ...-..+. ......-.+.+.-++|++||....+ ..+.+| +... ....
T Consensus 87 ~~g~l~v~~~~--~~~~i~~~d~~-g~~~~~~~--~~~~~~~~~i~~~~~g~l~v~~~~~-~~i~~~~~~g~----~~~~ 156 (286)
T 1q7f_A 87 NSGDIIVTERS--PTHQIQIYNQY-GQFVRKFG--ATILQHPRGVTVDNKGRIIVVECKV-MRVIIFDQNGN----VLHK 156 (286)
T ss_dssp TTTEEEEEECG--GGCEEEEECTT-SCEEEEEC--TTTCSCEEEEEECTTSCEEEEETTT-TEEEEECTTSC----EEEE
T ss_pred CCCeEEEEcCC--CCCEEEEECCC-CcEEEEec--CccCCCceEEEEeCCCCEEEEECCC-CEEEEEcCCCC----EEEE
Confidence 68999998632 12578999965 33222221 1111122345666789999986433 335556 4321 1111
Q ss_pred ccccccccccccCCccce-EEEeeCCcEEEEe--cCcEEEeeCCCCeEE
Q 048136 209 FQFLRDTYDVLENNLYPF-VYLVPDGNLYIFA--NNRSILLDPRANYVL 254 (559)
Q Consensus 209 ~p~l~~~~d~~~~~~yp~-~~~l~~G~iyv~G--g~~~e~yDp~t~~W~ 254 (559)
...... ...|. +.+-++|+||+.. +..+.+||+......
T Consensus 157 ~~~~~~-------~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~ 198 (286)
T 1q7f_A 157 FGCSKH-------LEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLR 198 (286)
T ss_dssp EECTTT-------CSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCEEE
T ss_pred eCCCCc-------cCCcEEEEECCCCCEEEEECCCCEEEEEcCCCCEEE
Confidence 110000 11233 3444689999886 457899998765433
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=95.85 E-value=0.53 Score=50.84 Aligned_cols=109 Identities=15% Similarity=0.062 Sum_probs=65.6
Q ss_pred ecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCcEEEEcCCCCCceeEE-c--CCCCCCC
Q 048136 128 LDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGSFLIFGGRDSFSYEYI-P--AERTENA 204 (559)
Q Consensus 128 ~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P--~~~~~~~ 204 (559)
+-++|++|+.+.. ..++.++|.. +.+-... +..+..-++++.-+||+.+.+++.+ .++.+| . .+.
T Consensus 145 ~~p~~~~~vs~~~---d~~V~v~D~~-t~~~~~~---i~~g~~~~~v~~spdg~~l~v~~~d-~~V~v~D~~~~t~---- 212 (543)
T 1nir_A 145 LDLPNLFSVTLRD---AGQIALVDGD-SKKIVKV---IDTGYAVHISRMSASGRYLLVIGRD-ARIDMIDLWAKEP---- 212 (543)
T ss_dssp CCGGGEEEEEEGG---GTEEEEEETT-TCCEEEE---EECSTTEEEEEECTTSCEEEEEETT-SEEEEEETTSSSC----
T ss_pred cCCCCEEEEEEcC---CCeEEEEECC-CceEEEE---EecCcccceEEECCCCCEEEEECCC-CeEEEEECcCCCC----
Confidence 4568999998765 2589999998 6654321 3322224566677899877777766 567777 5 332
Q ss_pred cceeccccccccccccCCccce-EEEee----CCcEEEEec---CcEEEeeCCCCeEEEEC
Q 048136 205 YSIPFQFLRDTYDVLENNLYPF-VYLVP----DGNLYIFAN---NRSILLDPRANYVLREY 257 (559)
Q Consensus 205 w~~~~p~l~~~~d~~~~~~yp~-~~~l~----~G~iyv~Gg---~~~e~yDp~t~~W~~~~ 257 (559)
.....+.. ...|+ +...+ ||+..++++ .++.+||..+.+-.+.+
T Consensus 213 -~~~~~i~~--------g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i 264 (543)
T 1nir_A 213 -TKVAEIKI--------GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIV 264 (543)
T ss_dssp -EEEEEEEC--------CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEE
T ss_pred -cEEEEEec--------CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceee
Confidence 11111111 12233 34456 888666654 57889999988765444
No 129
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=95.82 E-value=0.41 Score=46.25 Aligned_cols=113 Identities=16% Similarity=0.065 Sum_probs=65.7
Q ss_pred CeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCcEEEEcCCCCCceeEE-cCCCCCCC
Q 048136 126 GGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGSFLIFGGRDSFSYEYI-PAERTENA 204 (559)
Q Consensus 126 ~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~ 204 (559)
+..+.+++||+..|. .|..+++.+|+. +.+=..-.. +...-...+.+.. ++++|++...+ ..+-+| +++-
T Consensus 25 GL~~~~~~LyestG~-~g~S~v~~vD~~-tgkv~~~~~-l~~~~fgeGi~~~-~~~ly~ltw~~-~~v~v~D~~tl---- 95 (243)
T 3mbr_X 25 GLFYLRGHLYESTGE-TGRSSVRKVDLE-TGRILQRAE-VPPPYFGAGIVAW-RDRLIQLTWRN-HEGFVYDLATL---- 95 (243)
T ss_dssp EEEEETTEEEEEECC-TTSCEEEEEETT-TCCEEEEEE-CCTTCCEEEEEEE-TTEEEEEESSS-SEEEEEETTTT----
T ss_pred cEEEECCEEEEECCC-CCCceEEEEECC-CCCEEEEEe-CCCCcceeEEEEe-CCEEEEEEeeC-CEEEEEECCcC----
Confidence 344457899999887 466789999999 776543222 3332223444555 79999986543 345566 5442
Q ss_pred cceeccccccccccccCCccceEEEeeC-CcEEEEec-CcEEEeeCCCCeEEEEC
Q 048136 205 YSIPFQFLRDTYDVLENNLYPFVYLVPD-GNLYIFAN-NRSILLDPRANYVLREY 257 (559)
Q Consensus 205 w~~~~p~l~~~~d~~~~~~yp~~~~l~~-G~iyv~Gg-~~~e~yDp~t~~W~~~~ 257 (559)
.....+... ..+.. ++.| ++||+.-| ..+..+||++.+..+.+
T Consensus 96 -~~~~ti~~~--------~~Gwg-lt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I 140 (243)
T 3mbr_X 96 -TPRARFRYP--------GEGWA-LTSDDSHLYMSDGTAVIRKLDPDTLQQVGSI 140 (243)
T ss_dssp -EEEEEEECS--------SCCCE-EEECSSCEEEECSSSEEEEECTTTCCEEEEE
T ss_pred -cEEEEEeCC--------CCceE-EeeCCCEEEEECCCCeEEEEeCCCCeEEEEE
Confidence 111111111 12222 3344 45776633 46788999998876544
No 130
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=95.80 E-value=1.1 Score=43.89 Aligned_cols=113 Identities=12% Similarity=-0.017 Sum_probs=61.5
Q ss_pred CeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCcEEEEcCCC---CCceeEE-cCCCC
Q 048136 126 GGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGSFLIFGGRD---SFSYEYI-PAERT 201 (559)
Q Consensus 126 ~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~---~~s~E~y-P~~~~ 201 (559)
.+...+|+||+++... ..+.+||+. +.++..... .....-.+.+.-+||++|+....+ ...+-+| +..+.
T Consensus 50 ~~~~~~g~l~~~~~~~---~~i~~~d~~-~~~~~~~~~--~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~ 123 (333)
T 2dg1_A 50 LNFDRQGQLFLLDVFE---GNIFKINPE-TKEIKRPFV--SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDN 123 (333)
T ss_dssp EEECTTSCEEEEETTT---CEEEEECTT-TCCEEEEEE--CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCS
T ss_pred cEECCCCCEEEEECCC---CEEEEEeCC-CCcEEEEee--CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCE
Confidence 3455789999887542 479999998 777655321 111222344555689999876432 1234455 44331
Q ss_pred CCCcceeccccccccccccCCccc-eEEEeeCCcEEEEec--------CcEEEeeCCCCeEE
Q 048136 202 ENAYSIPFQFLRDTYDVLENNLYP-FVYLVPDGNLYIFAN--------NRSILLDPRANYVL 254 (559)
Q Consensus 202 ~~~w~~~~p~l~~~~d~~~~~~yp-~~~~l~~G~iyv~Gg--------~~~e~yDp~t~~W~ 254 (559)
.......... ...+ ....-++|++|+... ..+.+||+.+++..
T Consensus 124 ---~~~~~~~~~~-------~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~ 175 (333)
T 2dg1_A 124 ---LQDIIEDLST-------AYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVT 175 (333)
T ss_dssp ---CEEEECSSSS-------CCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEE
T ss_pred ---EEEEEccCcc-------CCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEE
Confidence 1111110000 0122 234456899998754 24677888776654
No 131
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=95.74 E-value=1.5 Score=41.83 Aligned_cols=131 Identities=12% Similarity=0.037 Sum_probs=68.0
Q ss_pred eEEEeCCCCCEEeCccC-CCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccc-cccccceEEEccC
Q 048136 102 SVFYNVNTLQVTPLKVI-TDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALK-DGRWYATQALLAD 179 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~-~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~-~~R~y~s~~~L~d 179 (559)
...||+. ++++.+... ......+-+...+|++|+.... ...+.+||+. .+..... +. ....-.+.+.-++
T Consensus 80 i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~i~~~d~~--g~~~~~~--~~~~~~~~~~i~~~~~ 151 (299)
T 2z2n_A 80 IGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMN---GNRIGRITDD--GKIREYE--LPNKGSYPSFITLGSD 151 (299)
T ss_dssp EEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETT---TTEEEEECTT--CCEEEEE--CSSTTCCEEEEEECTT
T ss_pred EEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecC---CceEEEECCC--CCEEEec--CCCCCCCCceEEEcCC
Confidence 4567765 455444321 1112223344568999997543 2478889984 3443321 11 1122234555668
Q ss_pred CcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccce-EEEeeCCcEEEEe--cCcEEEeeCCCCeEE
Q 048136 180 GSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPF-VYLVPDGNLYIFA--NNRSILLDPRANYVL 254 (559)
Q Consensus 180 G~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~-~~~l~~G~iyv~G--g~~~e~yDp~t~~W~ 254 (559)
|++|+..-.. ..+.+| + +++ ... ...... ...|. ...-++|+||+.. +..+.+||+ ++++.
T Consensus 152 g~l~v~~~~~-~~i~~~~~-~g~---~~~-~~~~~~-------~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~ 216 (299)
T 2z2n_A 152 NALWFTENQN-NAIGRITE-SGD---ITE-FKIPTP-------ASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEIT 216 (299)
T ss_dssp SCEEEEETTT-TEEEEECT-TCC---EEE-EECSST-------TCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE
T ss_pred CCEEEEeCCC-CEEEEEcC-CCc---EEE-eeCCCC-------CCcceeEEECCCCCEEEEccCCceEEEECC-CCcEE
Confidence 9999865322 234555 4 331 211 111100 11233 2334589999876 456889999 77665
No 132
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=95.73 E-value=1.8 Score=42.81 Aligned_cols=242 Identities=13% Similarity=0.117 Sum_probs=116.4
Q ss_pred CeecCCCcEEEEcCCCCC---------------------CCeEEEEeCCCCCCeecCC--CccccccccceEEEccCCcE
Q 048136 126 GGLDVNGNLISTGGFLGG---------------------SRTTRYLWGCPTCDWTEYP--TALKDGRWYATQALLADGSF 182 (559)
Q Consensus 126 ~~~l~dG~i~v~GG~~~g---------------------~~~v~~ydp~~t~~W~~~~--~~m~~~R~y~s~~~L~dG~V 182 (559)
-++.++|++|+.+..... ...+.++|+. +.+..... ..+.. -.++++-++|++
T Consensus 29 va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~-~g~~~~~~~~~~~~~---p~gia~d~~g~l 104 (329)
T 3fvz_A 29 VALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPN-NAEILQSSGKNLFYL---PHGLSIDTDGNY 104 (329)
T ss_dssp EEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTT-TCCEEEEECTTTCSS---EEEEEECTTSCE
T ss_pred EEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECC-CCeEEeccCCCccCC---ceEEEECCCCCE
Confidence 445678999988654210 1368999997 66543211 11222 234566678999
Q ss_pred EEEcCCCCCceeEE-cCCCCCCCcceecccccc-cccc-ccCCccceE-EEee-CCcEEEEec---CcEEEeeCCCCeEE
Q 048136 183 LIFGGRDSFSYEYI-PAERTENAYSIPFQFLRD-TYDV-LENNLYPFV-YLVP-DGNLYIFAN---NRSILLDPRANYVL 254 (559)
Q Consensus 183 yvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~-~~d~-~~~~~yp~~-~~l~-~G~iyv~Gg---~~~e~yDp~t~~W~ 254 (559)
||....+ ..+..| +... ......+... .... ...-..|.. ++.+ +|+||+... ..+.+||+......
T Consensus 105 ~v~d~~~-~~v~~~~~~g~----~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~~~ 179 (329)
T 3fvz_A 105 WVTDVAL-HQVFKLDPHSK----EGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKFVT 179 (329)
T ss_dssp EEEETTT-TEEEEECTTCS----SCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSCEEE
T ss_pred EEEECCC-CEEEEEeCCCC----eEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCEEE
Confidence 9887543 345556 4321 0011111000 0000 000123443 3445 899999873 46889996654332
Q ss_pred EECCCCCC------CCCcccCCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCC
Q 048136 255 REYPPLPG------GARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPD 328 (559)
Q Consensus 255 ~~~p~mp~------~~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~ 328 (559)
.+..-.. +...+| .++.+. + ..++||++...+ +.+.+||+.+
T Consensus 180 -~~~~~g~~~~~~~~~~~~p---~gia~d--~-------~~g~l~v~d~~~-----------------~~I~~~~~~~-- 227 (329)
T 3fvz_A 180 -QWGEESSGSSPRPGQFSVP---HSLALV--P-------HLDQLCVADREN-----------------GRIQCFKTDT-- 227 (329)
T ss_dssp -EECEECCSSSCCTTEESCE---EEEEEE--T-------TTTEEEEEETTT-----------------TEEEEEETTT--
T ss_pred -EeccCCCCCCCCCcccCCC---cEEEEE--C-------CCCEEEEEECCC-----------------CEEEEEECCC--
Confidence 3321000 011223 222221 1 138999987543 2455666542
Q ss_pred Cceeee-cCC-C-CcccccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEe-cCCCCCCccceee
Q 048136 329 PVWTTE-KMP-T-PRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTE-LAPSDIPRMYHSV 404 (559)
Q Consensus 329 ~~W~~~-~M~-~-~R~~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~-~~~~~~~R~yhs~ 404 (559)
.+.... ..+ . .+.. ++....|.+|+..|... .. ......+.+||+.+. +... +.+....-.+...
T Consensus 228 G~~~~~~~~~~~~~~~~--~~~~~pg~~~~~~g~~~-v~-----~~~~~~v~~~~~~~g---~~~~~~~~~~~~~~~p~~ 296 (329)
T 3fvz_A 228 KEFVREIKHASFGRNVF--AISYIPGFLFAVNGKPY-FG-----DQEPVQGFVMNFSSG---EIIDVFKPVRKHFDMPHD 296 (329)
T ss_dssp CCEEEEECCTTTTTCEE--EEEEETTEEEEEECCCC-TT-----CSCCCCEEEEETTTC---CEEEEECCSSSCCSSEEE
T ss_pred CcEEEEEeccccCCCcc--eeeecCCEEEEeCCCEE-ec-----cCCCcEEEEEEcCCC---eEEEEEcCCCCccCCeeE
Confidence 233222 211 1 1222 22333377777777531 11 111236889998876 5433 2211111111223
Q ss_pred eEECCCCceEEeCCC
Q 048136 405 ANLLPDGRVFVGGSN 419 (559)
Q Consensus 405 a~llpdG~Vlv~GG~ 419 (559)
.++.+||+|||+...
T Consensus 297 ia~~~dG~lyvad~~ 311 (329)
T 3fvz_A 297 IVASEDGTVYIGDAH 311 (329)
T ss_dssp EEECTTSEEEEEESS
T ss_pred EEECCCCCEEEEECC
Confidence 456899999999764
No 133
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=95.72 E-value=1.7 Score=42.34 Aligned_cols=87 Identities=10% Similarity=-0.071 Sum_probs=48.4
Q ss_pred eEEEeCCCCC----EEeCccCCCcccccCeecCCCc-EEEEcCCCCCCCeEEEEeC-CCCCCeecCCCccccccccceEE
Q 048136 102 SVFYNVNTLQ----VTPLKVITDTWCSSGGLDVNGN-LISTGGFLGGSRTTRYLWG-CPTCDWTEYPTALKDGRWYATQA 175 (559)
Q Consensus 102 ~~~yDp~t~~----w~~~~~~~~~~c~~~~~l~dG~-i~v~GG~~~g~~~v~~ydp-~~t~~W~~~~~~m~~~R~y~s~~ 175 (559)
..+||..+++ ...+. .+..........++|+ .+++|+. + ..+.+||. . +.+...+.. ......-.+.+
T Consensus 35 v~iw~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~-d--g~i~~wd~~~-~~~~~~~~~-~~~~~~v~~l~ 108 (342)
T 1yfq_A 35 LTVYKFDIQAKNVDLLQSL-RYKHPLLCCNFIDNTDLQIYVGTV-Q--GEILKVDLIG-SPSFQALTN-NEANLGICRIC 108 (342)
T ss_dssp EEEEEEETTTTEEEEEEEE-ECSSCEEEEEEEESSSEEEEEEET-T--SCEEEECSSS-SSSEEECBS-CCCCSCEEEEE
T ss_pred EEEEEeCCCCccccceeee-ecCCceEEEEECCCCCcEEEEEcC-C--CeEEEEEecc-CCceEeccc-cCCCCceEEEE
Confidence 5677776655 32222 1222222334556899 8888886 3 47999998 7 555443321 11222223444
Q ss_pred EccCCcEEEEcCCCCCceeEE
Q 048136 176 LLADGSFLIFGGRDSFSYEYI 196 (559)
Q Consensus 176 ~L~dG~VyvvGG~~~~s~E~y 196 (559)
..+ ++.++.|+.++ .+.+|
T Consensus 109 ~~~-~~~l~s~~~d~-~i~iw 127 (342)
T 1yfq_A 109 KYG-DDKLIAASWDG-LIEVI 127 (342)
T ss_dssp EET-TTEEEEEETTS-EEEEE
T ss_pred eCC-CCEEEEEcCCC-eEEEE
Confidence 455 78888888664 45555
No 134
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=95.70 E-value=0.28 Score=48.43 Aligned_cols=89 Identities=10% Similarity=0.124 Sum_probs=49.6
Q ss_pred eEEEeCCCCCEEeCccC--CCcccccCeecC--CCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccc-cccccceEEE
Q 048136 102 SVFYNVNTLQVTPLKVI--TDTWCSSGGLDV--NGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALK-DGRWYATQAL 176 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~--~~~~c~~~~~l~--dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~-~~R~y~s~~~ 176 (559)
+.+||..+++...+..+ |...-....... +|++++.|+. | ..+++||.. +.+|..... +. +...-.+++.
T Consensus 37 v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~-D--~~v~iWd~~-~~~~~~~~~-~~~h~~~V~~v~~ 111 (316)
T 3bg1_A 37 VKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSY-D--RKVIIWREE-NGTWEKSHE-HAGHDSSVNSVCW 111 (316)
T ss_dssp EEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEET-T--SCEEEECCS-SSCCCEEEE-ECCCSSCCCEEEE
T ss_pred EEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEEC-C--CEEEEEECC-CCcceEEEE-ccCCCCceEEEEE
Confidence 57788776654333222 111111111222 4888999887 3 579999998 776754321 22 2222234445
Q ss_pred ccC--CcEEEEcCCCCCceeEE
Q 048136 177 LAD--GSFLIFGGRDSFSYEYI 196 (559)
Q Consensus 177 L~d--G~VyvvGG~~~~s~E~y 196 (559)
-++ |++++.|+.++ ++.+|
T Consensus 112 ~p~~~g~~lasgs~D~-~i~lw 132 (316)
T 3bg1_A 112 APHDYGLILACGSSDG-AISLL 132 (316)
T ss_dssp CCTTTCSCEEEECSSS-CEEEE
T ss_pred CCCCCCcEEEEEcCCC-CEEEE
Confidence 555 78888888764 45566
No 135
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=95.65 E-value=1.8 Score=42.54 Aligned_cols=135 Identities=16% Similarity=0.119 Sum_probs=72.5
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEcc---
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLA--- 178 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~--- 178 (559)
..+||..+++-...-..+........+.+++.+++.|+.. ..+++||.. ...-..+. .+..+-..+...+
T Consensus 89 v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D---~~i~vwd~~-~~~~~~~~---~h~~~v~~~~~~~~~~ 161 (319)
T 3frx_A 89 LRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRD---KTIKVWTIK-GQCLATLL---GHNDWVSQVRVVPNEK 161 (319)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETT---SCEEEEETT-SCEEEEEC---CCSSCEEEEEECCC--
T ss_pred EEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCC---CeEEEEECC-CCeEEEEe---ccCCcEEEEEEccCCC
Confidence 6889998876433222232222233456789999999873 578999986 43222211 1112222333333
Q ss_pred ---CCcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEecC--cEEEeeCCCCe
Q 048136 179 ---DGSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFANN--RSILLDPRANY 252 (559)
Q Consensus 179 ---dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg~--~~e~yDp~t~~ 252 (559)
++..++.|+.+. .+.+| .... .....+. ... ..-..+...++|++++.|+. .+.+||..+.+
T Consensus 162 ~~~~~~~l~s~~~d~-~i~~wd~~~~-----~~~~~~~-~h~-----~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~ 229 (319)
T 3frx_A 162 ADDDSVTIISAGNDK-MVKAWNLNQF-----QIEADFI-GHN-----SNINTLTASPDGTLIASAGKDGEIMLWNLAAKK 229 (319)
T ss_dssp ----CCEEEEEETTS-CEEEEETTTT-----EEEEEEC-CCC-----SCEEEEEECTTSSEEEEEETTCEEEEEETTTTE
T ss_pred CCCCccEEEEEeCCC-EEEEEECCcc-----hhheeec-CCC-----CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 445677777653 56667 3321 1111111 110 01112344579999998874 57899998876
Q ss_pred EEE
Q 048136 253 VLR 255 (559)
Q Consensus 253 W~~ 255 (559)
-..
T Consensus 230 ~~~ 232 (319)
T 3frx_A 230 AMY 232 (319)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 136
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=95.65 E-value=1.5 Score=41.86 Aligned_cols=60 Identities=13% Similarity=0.149 Sum_probs=38.2
Q ss_pred CCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCcEEEEcCCCCCceeEE
Q 048136 130 VNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGSFLIFGGRDSFSYEYI 196 (559)
Q Consensus 130 ~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y 196 (559)
+++..+++|+. + ..+++||.. +.+-...- ......-.+++..++++.+++|+.++ .+.+|
T Consensus 27 ~~~~~l~s~~~-d--g~v~vw~~~-~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg-~i~~~ 86 (313)
T 3odt_A 27 VDDSKVASVSR-D--GTVRLWSKD-DQWLGTVV--YTGQGFLNSVCYDSEKELLLFGGKDT-MINGV 86 (313)
T ss_dssp EETTEEEEEET-T--SEEEEEEES-SSEEEEEE--EECSSCEEEEEEETTTTEEEEEETTS-CEEEE
T ss_pred cCCCEEEEEEc-C--CcEEEEECC-CCEEEEEe--ecCCccEEEEEECCCCCEEEEecCCC-eEEEE
Confidence 78888999886 3 578999986 54332211 11223334556667999999998765 34445
No 137
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=95.61 E-value=0.76 Score=48.99 Aligned_cols=68 Identities=10% Similarity=-0.045 Sum_probs=42.4
Q ss_pred ccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCe--ecCCCccccc-cc-cceEEEcc--CCcEEEEcCCCCCceeE
Q 048136 122 WCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDW--TEYPTALKDG-RW-YATQALLA--DGSFLIFGGRDSFSYEY 195 (559)
Q Consensus 122 ~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W--~~~~~~m~~~-R~-y~s~~~L~--dG~VyvvGG~~~~s~E~ 195 (559)
.....+.-+||+.+++|+. ..+.+||.. +..- .... .+... .. -.+++..+ ||+.+++|+.++ .+.+
T Consensus 20 ~v~~~~~spdg~~l~~~~~----~~v~v~~~~-~~~~~~~~~~-~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg-~v~v 92 (615)
T 1pgu_A 20 FTTHLSYDPTTNAIAYPCG----KSAFVRCLD-DGDSKVPPVV-QFTGHGSSVVTTVKFSPIKGSQYLCSGDESG-KVIV 92 (615)
T ss_dssp CCCCCEEETTTTEEEEEET----TEEEEEECC-SSCCSSCSEE-EECTTTTSCEEEEEECSSTTCCEEEEEETTS-EEEE
T ss_pred ceeEEEECCCCCEEEEecC----CeEEEEECC-CCCCccccce-EEecCCCceEEEEEECcCCCCCEEEEecCCC-EEEE
Confidence 3344567789999999873 479999987 5410 1111 13222 22 34566677 899999998764 4566
Q ss_pred E
Q 048136 196 I 196 (559)
Q Consensus 196 y 196 (559)
|
T Consensus 93 w 93 (615)
T 1pgu_A 93 W 93 (615)
T ss_dssp E
T ss_pred E
Confidence 6
No 138
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=95.49 E-value=1.3 Score=43.95 Aligned_cols=111 Identities=13% Similarity=0.004 Sum_probs=63.9
Q ss_pred eecC--CCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCcEEEEcCCCCCceeEE-cCCCCCC
Q 048136 127 GLDV--NGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGSFLIFGGRDSFSYEYI-PAERTEN 203 (559)
Q Consensus 127 ~~l~--dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~ 203 (559)
...+ +|+.+++|+. + ..+++||.. +.+-..... ........+++.-+||+++++|+.++ .+.+| ..+.+
T Consensus 132 ~~~~~~~~~~l~s~s~-d--g~i~~wd~~-~~~~~~~~~-~~~~~~i~~~~~~pdg~~lasg~~dg-~i~iwd~~~~~-- 203 (343)
T 3lrv_A 132 YGHNEVNTEYFIWADN-R--GTIGFQSYE-DDSQYIVHS-AKSDVEYSSGVLHKDSLLLALYSPDG-ILDVYNLSSPD-- 203 (343)
T ss_dssp ECCC---CCEEEEEET-T--CCEEEEESS-SSCEEEEEC-CCSSCCCCEEEECTTSCEEEEECTTS-CEEEEESSCTT--
T ss_pred EcCCCCCCCEEEEEeC-C--CcEEEEECC-CCcEEEEEe-cCCCCceEEEEECCCCCEEEEEcCCC-EEEEEECCCCC--
Confidence 3455 8999999986 3 578999987 555432211 12222345666778999999998764 57777 44431
Q ss_pred CcceeccccccccccccCCccceEEEeeCCcEEEEec-CcEEEeeCCCCe
Q 048136 204 AYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN-NRSILLDPRANY 252 (559)
Q Consensus 204 ~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg-~~~e~yDp~t~~ 252 (559)
.. ...+..... ..-..+...++|+.++.|+ ..+.+||.++.+
T Consensus 204 -~~-~~~~~~~h~-----~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~ 246 (343)
T 3lrv_A 204 -QA-SSRFPVDEE-----AKIKEVKFADNGYWMVVECDQTVVCFDLRKDV 246 (343)
T ss_dssp -SC-CEECCCCTT-----SCEEEEEECTTSSEEEEEESSBEEEEETTSST
T ss_pred -CC-ccEEeccCC-----CCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCC
Confidence 11 011111000 0111223346888887765 468899988764
No 139
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=95.45 E-value=0.59 Score=48.48 Aligned_cols=72 Identities=15% Similarity=0.213 Sum_probs=38.5
Q ss_pred cccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEe-CCCCCCCeEEecCCCCCCccceeeeEECCCCceEEeCCCC
Q 048136 342 MSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYK-PSKPPGSRFTELAPSDIPRMYHSVANLLPDGRVFVGGSND 420 (559)
Q Consensus 342 ~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YD-P~t~~g~~Wt~~~~~~~~R~yhs~a~llpdG~Vlv~GG~~ 420 (559)
.|..++.-||+||..|-...|.-|..... ....+..-+ |... +...++. -.+|+ .+|..||+||.-|-+.
T Consensus 287 ~hs~alt~~G~v~~wG~n~~GqLG~g~~~-~~~~p~~v~~~~~~---~v~~va~----G~~hs-~alt~~G~v~~wG~n~ 357 (406)
T 4d9s_A 287 RHTMALTSDGKLYGWGWNKFGQVGVGNNL-DQCSPVQVRFPDDQ---KVVQVSC----GWRHT-LAVTERNNVFAWGRGT 357 (406)
T ss_dssp SEEEEEETTSCEEEEECCTTSTTCSSSSS-CEEEEEEECCGGGC---CEEEEEE----CSSEE-EEEETTSCEEEEECCT
T ss_pred CEEEEEcCCCeEEEeeCCCCCCCCCCCCC-CCccCEEEeccCCC---cEEEEEe----CCCeE-EEEeCCCCEEEecCCC
Confidence 34456677999999985544433221111 111121111 1212 3443332 34675 5566899999999876
Q ss_pred CC
Q 048136 421 ND 422 (559)
Q Consensus 421 ~~ 422 (559)
++
T Consensus 358 ~G 359 (406)
T 4d9s_A 358 NG 359 (406)
T ss_dssp TS
T ss_pred CC
Confidence 65
No 140
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=95.40 E-value=0.95 Score=45.28 Aligned_cols=142 Identities=12% Similarity=0.119 Sum_probs=71.0
Q ss_pred eEEEeCCCCC------EEeCccCC----CcccccCeec----CCCcE-EEEcCCCCCCCeEEEEeCCCC------CC---
Q 048136 102 SVFYNVNTLQ------VTPLKVIT----DTWCSSGGLD----VNGNL-ISTGGFLGGSRTTRYLWGCPT------CD--- 157 (559)
Q Consensus 102 ~~~yDp~t~~------w~~~~~~~----~~~c~~~~~l----~dG~i-~v~GG~~~g~~~v~~ydp~~t------~~--- 157 (559)
..+||..+++ +..+.... .......... ++++. +++|+. + ..+.+||.. + .+
T Consensus 93 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-d--g~i~iwd~~-~~~~~~~~~~~~ 168 (397)
T 1sq9_A 93 LLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDV-K--GTTYIWKFH-PFADESNSLTLN 168 (397)
T ss_dssp EEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEET-T--SCEEEEEEE-SSSSHHHHTTTC
T ss_pred EEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeC-C--CcEEEEeCC-ccccccccceee
Confidence 5678877766 55554321 1222233455 78998 888876 3 478888876 4 22
Q ss_pred eecCCCccc--------cccccceEEEccCCcEEEEcCCCCCceeEE-cCCCCCCCcceeccccc--cccccccCCccce
Q 048136 158 WTEYPTALK--------DGRWYATQALLADGSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLR--DTYDVLENNLYPF 226 (559)
Q Consensus 158 W~~~~~~m~--------~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~--~~~d~~~~~~yp~ 226 (559)
|..... +. ....-.+++..++| .+++|+.++ .+.+| ..+. .....+.. .... ....-..
T Consensus 169 ~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg-~i~i~d~~~~-----~~~~~~~~~~~h~~--~~~~i~~ 238 (397)
T 1sq9_A 169 WSPTLE-LQGTVESPMTPSQFATSVDISERG-LIATGFNNG-TVQISELSTL-----RPLYNFESQHSMIN--NSNSIRS 238 (397)
T ss_dssp CCCEEE-EEEEECCSSSSCCCCCEEEECTTS-EEEEECTTS-EEEEEETTTT-----EEEEEEECCC---C--CCCCEEE
T ss_pred ccCcce-eeeeeccccCCCCCceEEEECCCc-eEEEEeCCC-cEEEEECCCC-----ceeEEEeccccccc--cCCccce
Confidence 211101 21 12333456666788 777777654 46666 3332 11111110 0000 0001112
Q ss_pred EEEeeCCcEEEEecC-----cEEEeeCCCCeEEEEC
Q 048136 227 VYLVPDGNLYIFANN-----RSILLDPRANYVLREY 257 (559)
Q Consensus 227 ~~~l~~G~iyv~Gg~-----~~e~yDp~t~~W~~~~ 257 (559)
+...++|++++.|+. .+.+||..+.+-...+
T Consensus 239 i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~ 274 (397)
T 1sq9_A 239 VKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSL 274 (397)
T ss_dssp EEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEE
T ss_pred EEECCCCCEEEEEecCCCCceEEEEECCCCccccee
Confidence 334568998888764 4778999887654333
No 141
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=95.38 E-value=0.76 Score=44.98 Aligned_cols=189 Identities=8% Similarity=-0.011 Sum_probs=97.6
Q ss_pred ceEEEccCCcEEEEcCCC-CCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEe--cCcEEEee
Q 048136 172 ATQALLADGSFLIFGGRD-SFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFA--NNRSILLD 247 (559)
Q Consensus 172 ~s~~~L~dG~VyvvGG~~-~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~G--g~~~e~yD 247 (559)
++.+.-+||++|+..|.. ..++.++ +++++ -....++ . .+.++..+...+++||+.. .+.+.+||
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~---v~~~i~l-~-------~~~fgeGi~~~g~~lyv~t~~~~~v~viD 92 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYGRSSVRQVALQTGK---VENIHKM-D-------DSYFGEGLTLLNEKLYQVVWLKNIGFIYD 92 (266)
T ss_dssp EEEEECSTTEEEEEECSTTTCEEEEEETTTCC---EEEEEEC-C-------TTCCEEEEEEETTEEEEEETTCSEEEEEE
T ss_pred ccEEEeCCCeEEEECCCCCCCEEEEEECCCCC---EEEEEec-C-------CCcceEEEEEeCCEEEEEEecCCEEEEEE
Confidence 466666669999998853 3566777 76652 1111121 1 1234444455577999987 45789999
Q ss_pred CCCCeEEEECCCCCCCCCcccCCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCC
Q 048136 248 PRANYVLREYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSP 327 (559)
Q Consensus 248 p~t~~W~~~~p~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~ 327 (559)
+++.+....++. + + | .|.++. + .+.++|++-|. +.+..+|+..-
T Consensus 93 ~~t~~v~~~i~~---g-~--~-~g~glt-~----------Dg~~l~vs~gs------------------~~l~viD~~t~ 136 (266)
T 2iwa_A 93 RRTLSNIKNFTH---Q-M--K-DGWGLA-T----------DGKILYGSDGT------------------SILYEIDPHTF 136 (266)
T ss_dssp TTTTEEEEEEEC---C-S--S-SCCEEE-E----------CSSSEEEECSS------------------SEEEEECTTTC
T ss_pred CCCCcEEEEEEC---C-C--C-CeEEEE-E----------CCCEEEEECCC------------------CeEEEEECCCC
Confidence 999876655531 1 0 1 133321 1 24678877542 23344444320
Q ss_pred C--CceeeecCCCCcccccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCC-------CC
Q 048136 328 D--PVWTTEKMPTPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSD-------IP 398 (559)
Q Consensus 328 ~--~~W~~~~M~~~R~~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~-------~~ 398 (559)
. .+......+.+-...+.+...||+||+..... .++.+-||++.+-..|-.++.+. .+
T Consensus 137 ~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~~-------------~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~ 203 (266)
T 2iwa_A 137 KLIKKHNVKYNGHRVIRLNELEYINGEVWANIWQT-------------DCIARISAKDGTLLGWILLPNLRKKLIDEGFR 203 (266)
T ss_dssp CEEEEEECEETTEECCCEEEEEEETTEEEEEETTS-------------SEEEEEETTTCCEEEEEECHHHHHHHHHTTCT
T ss_pred cEEEEEEECCCCcccccceeEEEECCEEEEecCCC-------------CeEEEEECCCCcEEEEEECCCccccccccccc
Confidence 0 01111111112112223444599999865332 16889999988332333332110 00
Q ss_pred --ccceeeeEECCCC-ceEEeCCCCC
Q 048136 399 --RMYHSVANLLPDG-RVFVGGSNDN 421 (559)
Q Consensus 399 --R~yhs~a~llpdG-~Vlv~GG~~~ 421 (559)
-.-++.| +.||| ++||+|....
T Consensus 204 ~~~v~nGIa-~~~~~~~lfVTgk~~~ 228 (266)
T 2iwa_A 204 DIDVLNGIA-WDQENKRIFVTGKLWP 228 (266)
T ss_dssp TCCCEEEEE-EETTTTEEEEEETTCS
T ss_pred ccCceEEEE-EcCCCCEEEEECCCCC
Confidence 0113444 45675 7899998643
No 142
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=95.31 E-value=1.5 Score=44.27 Aligned_cols=233 Identities=14% Similarity=0.053 Sum_probs=106.6
Q ss_pred CCCcEEEEcCCCCCCCeEEEEeCCCCCCee-cCCCcccc-ccccceEEEcc-CCcEEEEcCCCCCceeEE-cCCCCCCCc
Q 048136 130 VNGNLISTGGFLGGSRTTRYLWGCPTCDWT-EYPTALKD-GRWYATQALLA-DGSFLIFGGRDSFSYEYI-PAERTENAY 205 (559)
Q Consensus 130 ~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~-~~~~~m~~-~R~y~s~~~L~-dG~VyvvGG~~~~s~E~y-P~~~~~~~w 205 (559)
++...+++.|..+ ..+.+||........ .... +.. ...-.+++..+ +++++++|+.++ .+.+| ..++.. ..
T Consensus 44 ~~~~~~~~~~~~~--g~i~v~~~~~~~~~~~~~~~-~~~h~~~V~~~~~~p~~~~~l~s~s~dg-~v~vw~~~~~~~-~~ 118 (402)
T 2aq5_A 44 PKFMALICEASGG--GAFLVLPLGKTGRVDKNVPL-VCGHTAPVLDIAWCPHNDNVIASGSEDC-TVMVWEIPDGGL-VL 118 (402)
T ss_dssp SSEEEEEBCCSSS--CCEEEEETTCCEECCTTCCC-BCCCSSCEEEEEECTTCTTEEEEEETTS-EEEEEECCTTCC-SS
T ss_pred CCeEEEEEEEcCC--CEEEEEECccCCCCCCCCce-EecCCCCEEEEEeCCCCCCEEEEEeCCC-eEEEEEccCCCC-cc
Confidence 3444444433223 478899875122221 1111 221 12223444555 789999998764 56677 333210 00
Q ss_pred c--eeccccccccccccCCccceEEEeeCC-cEEEEec--CcEEEeeCCCCeEEEECCCCCCCCCcccCCCceeeccccc
Q 048136 206 S--IPFQFLRDTYDVLENNLYPFVYLVPDG-NLYIFAN--NRSILLDPRANYVLREYPPLPGGARNYPSTSTSVLLPLKL 280 (559)
Q Consensus 206 ~--~~~p~l~~~~d~~~~~~yp~~~~l~~G-~iyv~Gg--~~~e~yDp~t~~W~~~~p~mp~~~~~~p~~g~~v~lpl~~ 280 (559)
. .....+.... ..-..+...++| ++++.|+ ..+.+||..+++....+.. .. ....-.++.+ .
T Consensus 119 ~~~~~~~~~~~h~-----~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~----~~~~v~~~~~--~- 185 (402)
T 2aq5_A 119 PLREPVITLEGHT-----KRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGP-DV----HPDTIYSVDW--S- 185 (402)
T ss_dssp CBCSCSEEEECCS-----SCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECT-TT----CCSCEEEEEE--C-
T ss_pred ccCCceEEecCCC-----CeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEec-CC----CCCceEEEEE--C-
Confidence 0 0000011110 011123344677 5787776 4588999999876644410 10 1100112111 1
Q ss_pred ccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeeecCCCC-cccccEEEeeCCeEEEEcCc
Q 048136 281 YRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTEKMPTP-RVMSDGVLLPTGDVLLINGA 359 (559)
Q Consensus 281 ~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~-R~~~~av~LpdG~V~vvGG~ 359 (559)
.+++.+++|+.+ ..+..+|+.......+....... +... ....+||+++++|..
T Consensus 186 -------~~~~~l~~~~~d-----------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~g~~ 240 (402)
T 2aq5_A 186 -------RDGALICTSCRD-----------------KRVRVIEPRKGTVVAEKDRPHEGTRPVH-AVFVSEGKILTTGFS 240 (402)
T ss_dssp -------TTSSCEEEEETT-----------------SEEEEEETTTTEEEEEEECSSCSSSCCE-EEECSTTEEEEEEEC
T ss_pred -------CCCCEEEEEecC-----------------CcEEEEeCCCCceeeeeccCCCCCcceE-EEEcCCCcEEEEecc
Confidence 267777887754 23445565431111111011111 2222 456789999998732
Q ss_pred CCCCCCccCCCCCCcccEEEeCCCCCC-CeEEecCCCCCCccceeeeEECCCCceEE-eCCC
Q 048136 360 ELGSAGWKDADKPCFKPLLYKPSKPPG-SRFTELAPSDIPRMYHSVANLLPDGRVFV-GGSN 419 (559)
Q Consensus 360 ~~g~~g~~~~~~~~~~~e~YDP~t~~g-~~Wt~~~~~~~~R~yhs~a~llpdG~Vlv-~GG~ 419 (559)
.. . -..+.+||..+..- ..-..+. .... .......|||+.++ +|+.
T Consensus 241 ~~-~---------d~~i~iwd~~~~~~~~~~~~~~---~~~~-v~~~~~s~~~~~l~~~g~~ 288 (402)
T 2aq5_A 241 RM-S---------ERQVALWDTKHLEEPLSLQELD---TSSG-VLLPFFDPDTNIVYLCGKG 288 (402)
T ss_dssp TT-C---------CEEEEEEETTBCSSCSEEEECC---CCSS-CEEEEEETTTTEEEEEETT
T ss_pred CC-C---------CceEEEEcCccccCCceEEecc---CCCc-eeEEEEcCCCCEEEEEEcC
Confidence 10 0 02688999877511 0111111 1111 12345678998774 5654
No 143
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=95.29 E-value=1.1 Score=46.01 Aligned_cols=133 Identities=14% Similarity=0.047 Sum_probs=70.1
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCc
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGS 181 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~ 181 (559)
..+||..+++....-..+.. .-..+..++..+++|+. + ..+.+||.. +.+-......+......-..... +++
T Consensus 195 i~vwd~~~~~~~~~~~~h~~--~v~~l~~~~~~l~s~s~-d--g~i~vwd~~-~~~~~~~~~~~~~~~~~v~~~~~-~~~ 267 (435)
T 1p22_A 195 VRVWDVNTGEMLNTLIHHCE--AVLHLRFNNGMMVTCSK-D--RSIAVWDMA-SPTDITLRRVLVGHRAAVNVVDF-DDK 267 (435)
T ss_dssp EEEEESSSCCEEEEECCCCS--CEEEEECCTTEEEEEET-T--SCEEEEECS-SSSCCEEEEEECCCSSCEEEEEE-ETT
T ss_pred EEEEECCCCcEEEEEcCCCC--cEEEEEEcCCEEEEeeC-C--CcEEEEeCC-CCCCceeeeEecCCCCcEEEEEe-CCC
Confidence 67888887765432221211 11122336678888876 3 578999987 44321110111112222223334 788
Q ss_pred EEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEec--CcEEEeeCCCCeEEE
Q 048136 182 FLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN--NRSILLDPRANYVLR 255 (559)
Q Consensus 182 VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg--~~~e~yDp~t~~W~~ 255 (559)
.+++|+.++ .+.+| ..+. .....+ ... ......+..++++++.|+ ..+.+||..+++-..
T Consensus 268 ~l~s~~~dg-~i~vwd~~~~-----~~~~~~-~~~-------~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~ 330 (435)
T 1p22_A 268 YIVSASGDR-TIKVWNTSTC-----EFVRTL-NGH-------KRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR 330 (435)
T ss_dssp EEEEEETTS-EEEEEETTTC-----CEEEEE-ECC-------SSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEE
T ss_pred EEEEEeCCC-eEEEEECCcC-----cEEEEE-cCC-------CCcEEEEEeCCCEEEEEeCCCeEEEEECCCCCEEE
Confidence 888888764 46667 4432 111111 111 112233445788888876 468899999876543
No 144
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=95.29 E-value=1.4 Score=42.53 Aligned_cols=185 Identities=11% Similarity=0.051 Sum_probs=97.2
Q ss_pred eEEEccCCcEEEEcCCCC-CceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEe--cCcEEEeeC
Q 048136 173 TQALLADGSFLIFGGRDS-FSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFA--NNRSILLDP 248 (559)
Q Consensus 173 s~~~L~dG~VyvvGG~~~-~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~G--g~~~e~yDp 248 (559)
+.+ +.++++|+..|..+ .++..+ +++++ -....++. ...+.......+++||+.. .+.+.+||+
T Consensus 25 GL~-~~~~~LyestG~~g~S~v~~vD~~tgk---v~~~~~l~--------~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~ 92 (243)
T 3mbr_X 25 GLF-YLRGHLYESTGETGRSSVRKVDLETGR---ILQRAEVP--------PPYFGAGIVAWRDRLIQLTWRNHEGFVYDL 92 (243)
T ss_dssp EEE-EETTEEEEEECCTTSCEEEEEETTTCC---EEEEEECC--------TTCCEEEEEEETTEEEEEESSSSEEEEEET
T ss_pred cEE-EECCEEEEECCCCCCceEEEEECCCCC---EEEEEeCC--------CCcceeEEEEeCCEEEEEEeeCCEEEEEEC
Confidence 444 34799999999865 456777 77653 11111221 1234444455689999987 456899999
Q ss_pred CCCeEEEECCCCCCCCCcccCCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCC
Q 048136 249 RANYVLREYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPD 328 (559)
Q Consensus 249 ~t~~W~~~~p~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~ 328 (559)
++-+-...++ ++..|-++.. .++++|+.=|.+ .+..+|+.+-.
T Consensus 93 ~tl~~~~ti~--------~~~~Gwglt~-----------dg~~L~vSdgs~------------------~l~~iDp~t~~ 135 (243)
T 3mbr_X 93 ATLTPRARFR--------YPGEGWALTS-----------DDSHLYMSDGTA------------------VIRKLDPDTLQ 135 (243)
T ss_dssp TTTEEEEEEE--------CSSCCCEEEE-----------CSSCEEEECSSS------------------EEEEECTTTCC
T ss_pred CcCcEEEEEe--------CCCCceEEee-----------CCCEEEEECCCC------------------eEEEEeCCCCe
Confidence 9988765553 2222333321 256677765532 22334433200
Q ss_pred --CceeeecCCCCcccccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCC-------CCc
Q 048136 329 --PVWTTEKMPTPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSD-------IPR 399 (559)
Q Consensus 329 --~~W~~~~M~~~R~~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~-------~~R 399 (559)
.+.+....+.+-...+-....+|+||+..-.+ ..+.+-||++.+-..|-.++.+. .+.
T Consensus 136 ~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s-------------~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~ 202 (243)
T 3mbr_X 136 QVGSIKVTAGGRPLDNLNELEWVNGELLANVWLT-------------SRIARIDPASGKVVAWIDLQALVPDADALTDST 202 (243)
T ss_dssp EEEEEECEETTEECCCEEEEEEETTEEEEEETTT-------------TEEEEECTTTCBEEEEEECGGGSTTTTSCCCTT
T ss_pred EEEEEEEccCCcccccceeeEEeCCEEEEEECCC-------------CeEEEEECCCCCEEEEEECCcCccccccccCCc
Confidence 11111122222222233445699999644211 16888999998433444444321 111
Q ss_pred --cceeeeEECCCCceEEeCCC
Q 048136 400 --MYHSVANLLPDGRVFVGGSN 419 (559)
Q Consensus 400 --~yhs~a~llpdG~Vlv~GG~ 419 (559)
.--+.|.---.+++||+|-.
T Consensus 203 ~~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 203 NDVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp SSCEEEEEEETTTTEEEEEETT
T ss_pred CCceEEEEEcCCCCEEEEECCC
Confidence 11234443235688999864
No 145
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.29 E-value=2.6 Score=41.89 Aligned_cols=238 Identities=10% Similarity=0.058 Sum_probs=112.5
Q ss_pred CCEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCcccccc-ccceEEEccCCcEEEEcCC
Q 048136 110 LQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGR-WYATQALLADGSFLIFGGR 188 (559)
Q Consensus 110 ~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R-~y~s~~~L~dG~VyvvGG~ 188 (559)
.+|+++.........+..+..++.++++|-. + .+..-+-. ..+|+++......+. ...++..- ++++|++|-.
T Consensus 25 ~~W~~~~~~~~~~~~~v~~~~~~~~~~~G~~--g--~i~~s~Dg-G~tW~~~~~~~~~~~~~~~~i~~~-~~~~~~~g~~ 98 (327)
T 2xbg_A 25 NPWEAIQLPTTATILDMSFIDRHHGWLVGVN--A--TLMETRDG-GQTWEPRTLVLDHSDYRFNSVSFQ-GNEGWIVGEP 98 (327)
T ss_dssp CCEEEEECSCSSCEEEEEESSSSCEEEEETT--T--EEEEESST-TSSCEECCCCCSCCCCEEEEEEEE-TTEEEEEEET
T ss_pred CCceEeecCCCCcEEEEEECCCCcEEEEcCC--C--eEEEeCCC-CCCCeECCCCCCCCCccEEEEEec-CCeEEEEECC
Confidence 4677765332222222233346778887632 2 23332222 468998743122222 23344443 6788887632
Q ss_pred CCCceeEE-cCC-CCCCCcceeccccccccccccCCccceEEEeeCCcEEEEecCcE-EEeeCCCCeEEEECCCCCCCCC
Q 048136 189 DSFSYEYI-PAE-RTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFANNRS-ILLDPRANYVLREYPPLPGGAR 265 (559)
Q Consensus 189 ~~~s~E~y-P~~-~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg~~~-e~yDp~t~~W~~~~p~mp~~~~ 265 (559)
+ .+| ... + ..|....... .. +...+ .+....++++|+.+.... .+-+-...+|.+...+.+ .
T Consensus 99 -g---~i~~S~DgG--~tW~~~~~~~-~~----~~~~~-~i~~~~~~~~~~~~~~g~v~~S~DgG~tW~~~~~~~~---~ 163 (327)
T 2xbg_A 99 -P---IMLHTTDGG--QSWSQIPLDP-KL----PGSPR-LIKALGNGSAEMITNVGAIYRTKDSGKNWQALVQEAI---G 163 (327)
T ss_dssp -T---EEEEESSTT--SSCEECCCCT-TC----SSCEE-EEEEEETTEEEEEETTCCEEEESSTTSSEEEEECSCC---C
T ss_pred -C---eEEEECCCC--CCceECcccc-CC----CCCeE-EEEEECCCCEEEEeCCccEEEEcCCCCCCEEeecCCC---c
Confidence 1 344 222 2 2465432110 00 00111 223345789998875432 222223468985322111 0
Q ss_pred cccCCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCC-CCceeeecCCCCccccc
Q 048136 266 NYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSP-DPVWTTEKMPTPRVMSD 344 (559)
Q Consensus 266 ~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~-~~~W~~~~M~~~R~~~~ 344 (559)
. -.++... .+++++++|-.. .-+ --.+. ...|+....+..+....
T Consensus 164 ~----~~~~~~~----------~~~~~~~~g~~G-~~~-------------------~S~d~gG~tW~~~~~~~~~~~~~ 209 (327)
T 2xbg_A 164 V----MRNLNRS----------PSGEYVAVSSRG-SFY-------------------STWEPGQTAWEPHNRTTSRRLHN 209 (327)
T ss_dssp C----EEEEEEC----------TTSCEEEEETTS-SEE-------------------EEECTTCSSCEEEECCSSSCEEE
T ss_pred c----eEEEEEc----------CCCcEEEEECCC-cEE-------------------EEeCCCCCceeECCCCCCCccce
Confidence 1 1122110 256777776321 111 11111 36898874444455554
Q ss_pred EEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCC--CCCCccceeeeEECCCCceEEeCCC
Q 048136 345 GVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAP--SDIPRMYHSVANLLPDGRVFVGGSN 419 (559)
Q Consensus 345 av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~--~~~~R~yhs~a~llpdG~Vlv~GG~ 419 (559)
.+..++|++|+++.. | .+.+.+ ++.|++|+.+.. ++.....++ ....+++++|++|+.
T Consensus 210 ~~~~~~g~~~~~~~~--G------------~~~~s~--~D~G~tW~~~~~~~~~~~~~~~~-v~~~~~~~~~~~g~~ 269 (327)
T 2xbg_A 210 MGFTPDGRLWMIVNG--G------------KIAFSD--PDNSENWGELLSPLRRNSVGFLD-LAYRTPNEVWLAGGA 269 (327)
T ss_dssp EEECTTSCEEEEETT--T------------EEEEEE--TTEEEEECCCBCTTSSCCSCEEE-EEESSSSCEEEEEST
T ss_pred eEECCCCCEEEEeCC--c------------eEEEec--CCCCCeeEeccCCcccCCcceEE-EEecCCCEEEEEeCC
Confidence 556789999987642 1 122332 233559997643 222222333 335678999998864
No 146
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=95.25 E-value=1.9 Score=44.09 Aligned_cols=215 Identities=15% Similarity=0.112 Sum_probs=106.3
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccc-cccccceEEEccCC
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALK-DGRWYATQALLADG 180 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~-~~R~y~s~~~L~dG 180 (559)
+.+||..+++.......+...+ .++..++++++.|+.. ..+.++|.. ..... +.. +. +...-......++|
T Consensus 171 v~iWd~~~~~~~~~~~~h~~~v--~~~s~~~~~l~sgs~d---~~i~~~d~~-~~~~~-~~~-~~~h~~~~~~~~~~~~g 242 (420)
T 4gga_A 171 VQLWDVQQQKRLRNMTSHSARV--GSLSWNSYILSSGSRS---GHIHHHDVR-VAEHH-VAT-LSGHSQEVCGLRWAPDG 242 (420)
T ss_dssp EEEEETTTTEEEEEECCCSSCE--EEEEEETTEEEEEETT---SEEEEEETT-SSSCE-EEE-EECCSSCEEEEEECTTS
T ss_pred EEEEEcCCCcEEEEEeCCCCce--EEEeeCCCEEEEEeCC---CceeEeeec-cccee-eEE-ecccccceeeeeecCCC
Confidence 7888888776433222232222 2344589999998863 578888876 33221 111 22 11222344556689
Q ss_pred cEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEee-CCcEEEEec----CcEEEeeCCCCeEE
Q 048136 181 SFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVP-DGNLYIFAN----NRSILLDPRANYVL 254 (559)
Q Consensus 181 ~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~-~G~iyv~Gg----~~~e~yDp~t~~W~ 254 (559)
+.++.|+.++ .+.+| ...+. ......... .... ..-......+ ++.+++.++ ..+.+||..+++-.
T Consensus 243 ~~l~s~~~D~-~v~i~~~~~~~-~~~~~~~~~-~~~~-----~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~ 314 (420)
T 4gga_A 243 RHLASGGNDN-LVNVWPSAPGE-GGWVPLQTF-TQHQ-----GAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACL 314 (420)
T ss_dssp SEEEEEETTS-CEEEEESSCCS-SCSCCSEEE-CCCS-----SCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEE
T ss_pred Ceeeeeeccc-cceEEeecccc-ccceeeeee-cccC-----CceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccc
Confidence 9999888764 35555 32221 001100000 0000 0000111223 556666543 45789999988755
Q ss_pred EECCCCCCCCCcccCCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeee
Q 048136 255 REYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTE 334 (559)
Q Consensus 255 ~~~p~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~ 334 (559)
..+.. . .. -.+.... + ...++++..|... ..+.++|... .+..
T Consensus 315 ~~~~~-~----~~---v~~~~~~--~-------~~~~lv~~sg~~d----------------~~I~iwd~~~----~~~v 357 (420)
T 4gga_A 315 SAVDA-H----SQ---VCSILWS--P-------HYKELISGHGFAQ----------------NQLVIWKYPT----MAKV 357 (420)
T ss_dssp EEEEC-S----SC---EEEEEEE--T-------TTTEEEEEECTTT----------------CCEEEEETTT----CCEE
T ss_pred eeecc-c----cc---eeeeeec--C-------CCCeEEEEEecCC----------------CEEEEEECCC----CcEE
Confidence 33311 0 00 1111111 1 2455655555431 2345566532 2222
Q ss_pred ---cCCCCcccccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCC
Q 048136 335 ---KMPTPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSK 383 (559)
Q Consensus 335 ---~M~~~R~~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t 383 (559)
.-+..+... ...-|||+.++.||.+ + ++.+||-..
T Consensus 358 ~~l~gH~~~V~~-l~~spdg~~l~S~s~D-~------------tvriWdv~~ 395 (420)
T 4gga_A 358 AELKGHTSRVLS-LTMSPDGATVASAAAD-E------------TLRLWRCFE 395 (420)
T ss_dssp EEECCCSSCEEE-EEECTTSSCEEEEETT-T------------EEEEECCSC
T ss_pred EEEcCCCCCEEE-EEEcCCCCEEEEEecC-C------------eEEEEECCC
Confidence 223444444 3456899999998865 1 677887643
No 147
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=95.24 E-value=0.68 Score=46.83 Aligned_cols=193 Identities=9% Similarity=0.001 Sum_probs=98.6
Q ss_pred eecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCcEEEEcCCCCCceeEE-cCCCCCCCc
Q 048136 127 GLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGSFLIFGGRDSFSYEYI-PAERTENAY 205 (559)
Q Consensus 127 ~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w 205 (559)
++-+||+++++++.. ....+++||+. +.+-... +.....-.+++.-+||+.++.++.+ ...+| ..++. .
T Consensus 140 ~fSpDg~~la~as~~-~d~~i~iwd~~-~~~~~~~---~~~~~~V~~v~fspdg~~l~s~s~~--~~~~~~~~~~~---~ 209 (365)
T 4h5i_A 140 YISREGTVAAIASSK-VPAIMRIIDPS-DLTEKFE---IETRGEVKDLHFSTDGKVVAYITGS--SLEVISTVTGS---C 209 (365)
T ss_dssp EECTTSSCEEEEESC-SSCEEEEEETT-TTEEEEE---EECSSCCCEEEECTTSSEEEEECSS--CEEEEETTTCC---E
T ss_pred EEcCCCCEEEEEECC-CCCEEEEeECC-CCcEEEE---eCCCCceEEEEEccCCceEEeccce--eEEEEEeccCc---c
Confidence 456899987654321 12689999998 5543321 3333333456667899999888743 34455 33321 1
Q ss_pred ceeccccccccccccCCccceEEEeeCCcEEEEecC------cEEEeeCCCCeEEEE-CCCCCCCCCcccCCCceeeccc
Q 048136 206 SIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFANN------RSILLDPRANYVLRE-YPPLPGGARNYPSTSTSVLLPL 278 (559)
Q Consensus 206 ~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg~------~~e~yDp~t~~W~~~-~p~mp~~~~~~p~~g~~v~lpl 278 (559)
.......... ...-.+...+||+.++.+.. ....+|......... .-.+.+ +......+..
T Consensus 210 -~~~~~~~~~~-----~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~------~~~~V~~~~~ 277 (365)
T 4h5i_A 210 -IARKTDFDKN-----WSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTN------RFKGITSMDV 277 (365)
T ss_dssp -EEEECCCCTT-----EEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEES------SCSCEEEEEE
T ss_pred -eeeeecCCCC-----CCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecC------CCCCeEeEEE
Confidence 1111111000 01112334579998887642 245566555543310 000110 1111111222
Q ss_pred ccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeee----cCCCCcccccEEEeeCCeEE
Q 048136 279 KLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTE----KMPTPRVMSDGVLLPTGDVL 354 (559)
Q Consensus 279 ~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~----~M~~~R~~~~av~LpdG~V~ 354 (559)
. .+|+++++|+.+ .++..+|... .+.. .-....... ..--|||+.+
T Consensus 278 S--------pdg~~lasgs~D-----------------~~V~iwd~~~----~~~~~~~~~gH~~~V~~-v~fSpdg~~l 327 (365)
T 4h5i_A 278 D--------MKGELAVLASND-----------------NSIALVKLKD----LSMSKIFKQAHSFAITE-VTISPDSTYV 327 (365)
T ss_dssp C--------TTSCEEEEEETT-----------------SCEEEEETTT----TEEEEEETTSSSSCEEE-EEECTTSCEE
T ss_pred C--------CCCCceEEEcCC-----------------CEEEEEECCC----CcEEEEecCcccCCEEE-EEECCCCCEE
Confidence 2 278999999865 2345666542 2221 122233333 3456899999
Q ss_pred EEcCcCCCCCCccCCCCCCcccEEEeCCCC
Q 048136 355 LINGAELGSAGWKDADKPCFKPLLYKPSKP 384 (559)
Q Consensus 355 vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~ 384 (559)
+.|+.+. ++.+||-..+
T Consensus 328 aS~S~D~-------------tvrvw~ip~~ 344 (365)
T 4h5i_A 328 ASVSAAN-------------TIHIIKLPLN 344 (365)
T ss_dssp EEEETTS-------------EEEEEECCTT
T ss_pred EEEeCCC-------------eEEEEEcCCC
Confidence 9987652 7888986443
No 148
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=95.24 E-value=1.8 Score=41.97 Aligned_cols=222 Identities=11% Similarity=0.081 Sum_probs=105.9
Q ss_pred ecCC-CcEEEEcCCCCCCCeEEEEeCCCCCCeecCCC--ccc-cccccceEEEccCCcEEEEcCCCCCceeEE-cCCCCC
Q 048136 128 LDVN-GNLISTGGFLGGSRTTRYLWGCPTCDWTEYPT--ALK-DGRWYATQALLADGSFLIFGGRDSFSYEYI-PAERTE 202 (559)
Q Consensus 128 ~l~d-G~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~--~m~-~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~ 202 (559)
+.++ +++++.||. | .++++||.. +.+...... .+. +...-.+++..+||+.++.|+.+. .+.+| ....
T Consensus 46 ~sp~~~~~l~S~s~-D--~~i~vWd~~-~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~-~i~~~~~~~~-- 118 (340)
T 4aow_A 46 TTPQFPDMILSASR-D--KTIIMWKLT-RDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDG-TLRLWDLTTG-- 118 (340)
T ss_dssp ECTTCTTEEEEEET-T--SCEEEEEEC-CSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTS-EEEEEETTTT--
T ss_pred EeCCCCCEEEEEcC-C--CeEEEEECC-CCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccc-cceEEeeccc--
Confidence 3445 689999987 3 578899876 433211100 122 122233455567999999998765 34444 2221
Q ss_pred CCcceeccccccccccccCCccceEEEeeCCcEEEEec--CcEEEeeCCCCeEEEECCCCCCCCCcccCCCceeeccccc
Q 048136 203 NAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN--NRSILLDPRANYVLREYPPLPGGARNYPSTSTSVLLPLKL 280 (559)
Q Consensus 203 ~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg--~~~e~yDp~t~~W~~~~p~mp~~~~~~p~~g~~v~lpl~~ 280 (559)
......... ..........++++.++.|+ ..+.+||.....-.. .. ... .... -..+.+...
T Consensus 119 ---~~~~~~~~~------~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~-~~-~~~-~~~~---v~~~~~~~~- 182 (340)
T 4aow_A 119 ---TTTRRFVGH------TKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYT-VQ-DES-HSEW---VSCVRFSPN- 182 (340)
T ss_dssp ---EEEEEEECC------SSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEE-EC-SSS-CSSC---EEEEEECSC-
T ss_pred ---ceeeeecCC------CCceeEEEEeecCccceeecCCCeEEEEEeCCCceEE-EE-ecc-ccCc---ccceEEccC-
Confidence 000110000 01111223345777777775 356788877654331 21 110 0000 011111100
Q ss_pred ccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeee-cCCCCcccccEEEeeCCeEEEEcCc
Q 048136 281 YRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTE-KMPTPRVMSDGVLLPTGDVLLINGA 359 (559)
Q Consensus 281 ~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~av~LpdG~V~vvGG~ 359 (559)
....+++.|+.+. .+..+|+.. .+.... .-....... ...-|||+++++|+.
T Consensus 183 -------~~~~~~~s~~~d~-----------------~i~i~d~~~--~~~~~~~~~h~~~v~~-~~~s~~~~~l~s~s~ 235 (340)
T 4aow_A 183 -------SSNPIIVSCGWDK-----------------LVKVWNLAN--CKLKTNHIGHTGYLNT-VTVSPDGSLCASGGK 235 (340)
T ss_dssp -------SSSCEEEEEETTS-----------------CEEEEETTT--TEEEEEECCCSSCEEE-EEECTTSSEEEEEET
T ss_pred -------CCCcEEEEEcCCC-----------------EEEEEECCC--CceeeEecCCCCcEEE-EEECCCCCEEEEEeC
Confidence 1345666666541 234455442 111111 112222222 345689999999886
Q ss_pred CCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCccceeeeEECCCCceEEeCC
Q 048136 360 ELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANLLPDGRVFVGGS 418 (559)
Q Consensus 360 ~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~llpdG~Vlv~GG 418 (559)
+ + .+.+||..+. +-... +..... -......|++.+++++.
T Consensus 236 D-g------------~i~iwd~~~~---~~~~~--~~~~~~-v~~~~~~~~~~~~~~~~ 275 (340)
T 4aow_A 236 D-G------------QAMLWDLNEG---KHLYT--LDGGDI-INALCFSPNRYWLCAAT 275 (340)
T ss_dssp T-C------------EEEEEETTTT---EEEEE--EECSSC-EEEEEECSSSSEEEEEE
T ss_pred C-C------------eEEEEEeccC---ceeee--ecCCce-EEeeecCCCCceeeccC
Confidence 5 1 6789998776 32211 111111 22445667887776553
No 149
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=95.17 E-value=2.4 Score=40.79 Aligned_cols=65 Identities=15% Similarity=-0.003 Sum_probs=37.6
Q ss_pred ecCCCcEEEE-------cCCCCCCCeEEEEeCCCCCCeecCCC-ccc-cccccceEEEccC-CcEEEEcCCCCCceeEE-
Q 048136 128 LDVNGNLIST-------GGFLGGSRTTRYLWGCPTCDWTEYPT-ALK-DGRWYATQALLAD-GSFLIFGGRDSFSYEYI- 196 (559)
Q Consensus 128 ~l~dG~i~v~-------GG~~~g~~~v~~ydp~~t~~W~~~~~-~m~-~~R~y~s~~~L~d-G~VyvvGG~~~~s~E~y- 196 (559)
...+|++|+. +.. ...+.+||+. +.++..... ... ....-.+.+.-++ |++||....+ .+.+|
T Consensus 25 ~~~~g~l~~~~~~~~~~~~~---~~~i~~~d~~-~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~--~l~~~d 98 (314)
T 1pjx_A 25 FDKNGDFYIVAPEVEVNGKP---AGEILRIDLK-TGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRL--GLLVVQ 98 (314)
T ss_dssp ECTTSCEEEEETTCEETTEE---CCEEEEECTT-TCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTT--EEEEEE
T ss_pred ECCCCCEEEEEeccccCCCC---CCEEEEEeCC-CCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCC--CEEEEe
Confidence 3468999988 332 2578999988 777765421 000 1122234555567 8999876432 35556
Q ss_pred cC
Q 048136 197 PA 198 (559)
Q Consensus 197 P~ 198 (559)
+.
T Consensus 99 ~~ 100 (314)
T 1pjx_A 99 TD 100 (314)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 150
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=95.11 E-value=0.82 Score=44.61 Aligned_cols=70 Identities=10% Similarity=0.030 Sum_probs=44.5
Q ss_pred cCCcEEEEcCCCC-CceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEe--cCcEEEeeCCCCeE
Q 048136 178 ADGSFLIFGGRDS-FSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFA--NNRSILLDPRANYV 253 (559)
Q Consensus 178 ~dG~VyvvGG~~~-~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~G--g~~~e~yDp~t~~W 253 (559)
.||++|+..|..+ .++..+ +++++ -....++. ...+.......+++||+.. .+.+.+||+++.+.
T Consensus 51 ~~~~LyestG~~g~S~v~~vD~~Tgk---v~~~~~l~--------~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~ 119 (262)
T 3nol_A 51 RNGYFYESTGLNGRSSIRKVDIESGK---TLQQIELG--------KRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQ 119 (262)
T ss_dssp ETTEEEEEEEETTEEEEEEECTTTCC---EEEEEECC--------TTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCE
T ss_pred ECCEEEEECCCCCCceEEEEECCCCc---EEEEEecC--------CccceeEEEEeCCEEEEEEeeCCEEEEEECccCcE
Confidence 3899999999765 456677 77653 11112221 1233333445588999987 45789999999887
Q ss_pred EEECC
Q 048136 254 LREYP 258 (559)
Q Consensus 254 ~~~~p 258 (559)
...++
T Consensus 120 ~~ti~ 124 (262)
T 3nol_A 120 VRSFN 124 (262)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 65553
No 151
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=94.92 E-value=2.4 Score=46.63 Aligned_cols=137 Identities=13% Similarity=0.058 Sum_probs=74.7
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCC-CeecCCCccccccccceEEEccCC
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTC-DWTEYPTALKDGRWYATQALLADG 180 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~-~W~~~~~~m~~~R~y~s~~~L~dG 180 (559)
..+||..+++-...-..|..........++|+.+++|+.. ..+++||.. .. .+........+..+-.+++..+++
T Consensus 454 v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D---~~i~iwd~~-~~~~~~~~~~~~~h~~~v~~~~~~~~~ 529 (694)
T 3dm0_A 454 LRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRD---RTIKLWNTL-GECKYTISEGGEGHRDWVSCVRFSPNT 529 (694)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT---SCEEEECTT-SCEEEEECSSTTSCSSCEEEEEECSCS
T ss_pred EEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCC---CEEEEEECC-CCcceeeccCCCCCCCcEEEEEEeCCC
Confidence 6888987765433222233222234456799999998863 578999975 32 222221101122333344445554
Q ss_pred --cEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEecC--cEEEeeCCCCeEE
Q 048136 181 --SFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFANN--RSILLDPRANYVL 254 (559)
Q Consensus 181 --~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg~--~~e~yDp~t~~W~ 254 (559)
..++.|+.+ .++.+| .... ..... +.... ..-..+...++|++++.|+. .+.+||..+++-.
T Consensus 530 ~~~~l~s~s~d-~~v~vwd~~~~-----~~~~~-~~~h~-----~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~ 596 (694)
T 3dm0_A 530 LQPTIVSASWD-KTVKVWNLSNC-----KLRST-LAGHT-----GYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKL 596 (694)
T ss_dssp SSCEEEEEETT-SCEEEEETTTC-----CEEEE-ECCCS-----SCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEE
T ss_pred CcceEEEEeCC-CeEEEEECCCC-----cEEEE-EcCCC-----CCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceE
Confidence 466777665 457777 4332 11111 11110 01112344579999998874 5889999988754
No 152
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=94.91 E-value=2.5 Score=43.48 Aligned_cols=59 Identities=12% Similarity=0.148 Sum_probs=39.4
Q ss_pred EEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCccceeeeEECCCCceEEeCCCC
Q 048136 345 GVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANLLPDGRVFVGGSND 420 (559)
Q Consensus 345 av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~llpdG~Vlv~GG~~ 420 (559)
...-|||+.+++++...+ ...+.+||.++. +...+.... ........|||+.++.++..
T Consensus 316 ~~~spdG~~l~~~~~~~g----------~~~i~~~d~~~~---~~~~l~~~~----~~~~~~~spdg~~l~~~s~~ 374 (415)
T 2hqs_A 316 ADVSSDGKFMVMVSSNGG----------QQHIAKQDLATG---GVQVLSSTF----LDETPSLAPNGTMVIYSSSQ 374 (415)
T ss_dssp EEECTTSSEEEEEEECSS----------CEEEEEEETTTC---CEEECCCSS----SCEEEEECTTSSEEEEEEEE
T ss_pred eEECCCCCEEEEEECcCC----------ceEEEEEECCCC---CEEEecCCC----CcCCeEEcCCCCEEEEEEcC
Confidence 355689998877765421 136889999988 776654432 12345678999988887753
No 153
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=94.84 E-value=2.9 Score=40.05 Aligned_cols=60 Identities=18% Similarity=0.242 Sum_probs=36.2
Q ss_pred CCcEEEEcCCCCCCCeEEEEeCCCCC-------CeecCCCcccc-ccccceEEEccC--CcEEEEcCCCCCceeEE
Q 048136 131 NGNLISTGGFLGGSRTTRYLWGCPTC-------DWTEYPTALKD-GRWYATQALLAD--GSFLIFGGRDSFSYEYI 196 (559)
Q Consensus 131 dG~i~v~GG~~~g~~~v~~ydp~~t~-------~W~~~~~~m~~-~R~y~s~~~L~d--G~VyvvGG~~~~s~E~y 196 (559)
|++++++|+. + ..+++||.. +. .|..+.. +.. ...-.+++..++ ++.+++|+.++ .+.+|
T Consensus 70 d~~~l~s~~~-d--g~v~vwd~~-~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg-~v~iw 139 (351)
T 3f3f_A 70 YGRIIASASY-D--KTVKLWEED-PDQEECSGRRWNKLCT-LNDSKGSLYSVKFAPAHLGLKLACLGNDG-ILRLY 139 (351)
T ss_dssp GCSEEEEEET-T--SCEEEEEEC-TTSCTTSSCSEEEEEE-ECCCSSCEEEEEECCGGGCSEEEEEETTC-EEEEE
T ss_pred CCCEEEEEcC-C--CeEEEEecC-CCcccccccCcceeee-ecccCCceeEEEEcCCCCCcEEEEecCCC-cEEEe
Confidence 6899999987 3 478888876 33 2332221 222 122234555666 88888888764 45666
No 154
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=94.84 E-value=1.3 Score=43.31 Aligned_cols=64 Identities=6% Similarity=-0.110 Sum_probs=38.4
Q ss_pred ecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCcccccc--ccceEEEccCCc-EEEEcCCCCCceeEE-cCC
Q 048136 128 LDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGR--WYATQALLADGS-FLIFGGRDSFSYEYI-PAE 199 (559)
Q Consensus 128 ~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R--~y~s~~~L~dG~-VyvvGG~~~~s~E~y-P~~ 199 (559)
+-.++++|++++.. ..+.++|+. +.+.... +..+. .....+.-+||+ +|+.+.. ...+.+| +.+
T Consensus 7 ~~~~~~~~v~~~~~---~~v~~~d~~-~~~~~~~---~~~~~~~~~~~~~~s~dg~~~~v~~~~-~~~i~~~d~~t 74 (349)
T 1jmx_B 7 LKAGHEYMIVTNYP---NNLHVVDVA-SDTVYKS---CVMPDKFGPGTAMMAPDNRTAYVLNNH-YGDIYGIDLDT 74 (349)
T ss_dssp CCTTCEEEEEEETT---TEEEEEETT-TTEEEEE---EECSSCCSSCEEEECTTSSEEEEEETT-TTEEEEEETTT
T ss_pred ccCCCEEEEEeCCC---CeEEEEECC-CCcEEEE---EecCCCCCCceeEECCCCCEEEEEeCC-CCcEEEEeCCC
Confidence 34578888888652 689999998 6654332 22222 234566667887 5666533 3446666 544
No 155
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=94.83 E-value=0.46 Score=46.66 Aligned_cols=113 Identities=9% Similarity=0.058 Sum_probs=57.1
Q ss_pred ecCCC-cEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccC---CcEEEEcCCCCCceeEE-cCCCCC
Q 048136 128 LDVNG-NLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLAD---GSFLIFGGRDSFSYEYI-PAERTE 202 (559)
Q Consensus 128 ~l~dG-~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~d---G~VyvvGG~~~~s~E~y-P~~~~~ 202 (559)
..++| +++++|+...+...+++||.. +.+...... ......-.+++..++ |+.+++|+.++ .+.+| ..+..
T Consensus 26 ~~p~~~~l~~~~s~~~~d~~v~iw~~~-~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg-~i~iwd~~~~~- 101 (357)
T 3i2n_A 26 WVPCSAKFVTMGNFARGTGVIQLYEIQ-HGDLKLLRE-IEKAKPIKCGTFGATSLQQRYLATGDFGG-NLHIWNLEAPE- 101 (357)
T ss_dssp ECTTSSEEEEEEC--CCCEEEEEEEEC-SSSEEEEEE-EEESSCEEEEECTTCCTTTCCEEEEETTS-CEEEECTTSCS-
T ss_pred EcCCCceEEEecCccCCCcEEEEEeCC-CCcccceee-ecccCcEEEEEEcCCCCCCceEEEecCCC-eEEEEeCCCCC-
Confidence 44567 566677652223689999987 666543321 223233334444555 68888888764 46666 33321
Q ss_pred CCcceeccccccccccccCCccceEE-----EeeCCcEEEEecC--cEEEeeCCCCe
Q 048136 203 NAYSIPFQFLRDTYDVLENNLYPFVY-----LVPDGNLYIFANN--RSILLDPRANY 252 (559)
Q Consensus 203 ~~w~~~~p~l~~~~d~~~~~~yp~~~-----~l~~G~iyv~Gg~--~~e~yDp~t~~ 252 (559)
. ....+ ....+ ......+ ..++|++++.|+. .+.+||..++.
T Consensus 102 --~-~~~~~-~~~~~----~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~ 150 (357)
T 3i2n_A 102 --M-PVYSV-KGHKE----IINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKD 150 (357)
T ss_dssp --S-CSEEE-CCCSS----CEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCS
T ss_pred --c-cEEEE-Eeccc----ceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCC
Confidence 0 01111 11000 0000000 1358888888764 57889988764
No 156
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=94.70 E-value=0.84 Score=44.54 Aligned_cols=116 Identities=13% Similarity=-0.010 Sum_probs=65.6
Q ss_pred cccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccc-cceEEEccCCcEEEEcCCCCCceeEE-cC
Q 048136 121 TWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRW-YATQALLADGSFLIFGGRDSFSYEYI-PA 198 (559)
Q Consensus 121 ~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~-y~s~~~L~dG~VyvvGG~~~~s~E~y-P~ 198 (559)
.|..+- ...|++||+..|. .|..+++++|+. +.+=..--. +. ++. ..+.+.. +++||++-..+ ..+-+| ++
T Consensus 43 ~ftqGL-~~~~~~LyestG~-~g~S~v~~vD~~-Tgkv~~~~~-l~-~~~FgeGit~~-g~~ly~ltw~~-~~v~v~D~~ 115 (262)
T 3nol_A 43 AFTEGF-FYRNGYFYESTGL-NGRSSIRKVDIE-SGKTLQQIE-LG-KRYFGEGISDW-KDKIVGLTWKN-GLGFVWNIR 115 (262)
T ss_dssp CEEEEE-EEETTEEEEEEEE-TTEEEEEEECTT-TCCEEEEEE-CC-TTCCEEEEEEE-TTEEEEEESSS-SEEEEEETT
T ss_pred cccceE-EEECCEEEEECCC-CCCceEEEEECC-CCcEEEEEe-cC-CccceeEEEEe-CCEEEEEEeeC-CEEEEEECc
Confidence 343433 3448999999886 456789999999 776443222 32 232 2334554 78999996543 345566 55
Q ss_pred CCCCCCcceeccccccccccccCCccceEEEeeCC-cEEEEec-CcEEEeeCCCCeEEEEC
Q 048136 199 ERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDG-NLYIFAN-NRSILLDPRANYVLREY 257 (559)
Q Consensus 199 ~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G-~iyv~Gg-~~~e~yDp~t~~W~~~~ 257 (559)
+.+ ....+... .+... ++.|| +||+.-| +.+..+||++.+....+
T Consensus 116 t~~-----~~~ti~~~--------~eG~g-lt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I 162 (262)
T 3nol_A 116 NLR-----QVRSFNYD--------GEGWG-LTHNDQYLIMSDGTPVLRFLDPESLTPVRTI 162 (262)
T ss_dssp TCC-----EEEEEECS--------SCCCC-EEECSSCEEECCSSSEEEEECTTTCSEEEEE
T ss_pred cCc-----EEEEEECC--------CCceE-EecCCCEEEEECCCCeEEEEcCCCCeEEEEE
Confidence 431 11111111 11122 33455 4666543 45788999998876544
No 157
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=94.55 E-value=0.52 Score=48.26 Aligned_cols=66 Identities=8% Similarity=0.017 Sum_probs=40.7
Q ss_pred cCeecC-CCcEEEEcCCCCCCCeEEEEeCCCC---CC-eecCCCccccccccceEEEccCCcEEEEcCCCCCceeEE
Q 048136 125 SGGLDV-NGNLISTGGFLGGSRTTRYLWGCPT---CD-WTEYPTALKDGRWYATQALLADGSFLIFGGRDSFSYEYI 196 (559)
Q Consensus 125 ~~~~l~-dG~i~v~GG~~~g~~~v~~ydp~~t---~~-W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y 196 (559)
...+.+ ||+++++|+. + ..+++||.. + .. +..... +.+...-.+++..++++.+++|+.++ ++.+|
T Consensus 68 ~~~~s~~~~~~l~s~s~-d--g~v~vwd~~-~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~s~dg-~i~vw 138 (437)
T 3gre_A 68 SSAVSPGETPYLITGSD-Q--GVIKIWNLK-EIIVGEVYSSSLT-YDCSSTVTQITMIPNFDAFAVSSKDG-QIIVL 138 (437)
T ss_dssp EEEEECSSSCEEEEEET-T--SEEEEEEHH-HHHTTCCCSCSEE-EECSSCEEEEEECTTSSEEEEEETTS-EEEEE
T ss_pred EEEECCCCCCEEEEecC-C--ceEEEeECc-ccccCcccceeee-ccCCCCEEEEEEeCCCCEEEEEeCCC-EEEEE
Confidence 345667 8999999986 3 588999975 3 22 211111 22233334566677899999998764 34555
No 158
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=94.46 E-value=1.2 Score=44.81 Aligned_cols=133 Identities=10% Similarity=0.041 Sum_probs=69.8
Q ss_pred eEEEeCCCCCEEeCcc----CCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccc-cccccceEEE
Q 048136 102 SVFYNVNTLQVTPLKV----ITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALK-DGRWYATQAL 176 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~----~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~-~~R~y~s~~~ 176 (559)
+.+||..+++-..... -|........+.+||+.++.|+.. ..+++||.. +.+-.. . +. +...-.+++.
T Consensus 105 v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d---~~i~iwd~~-~~~~~~--~-~~~h~~~V~~~~~ 177 (344)
T 4gqb_B 105 VELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKD---ICIKVWDLA-QQVVLS--S-YRAHAAQVTCVAA 177 (344)
T ss_dssp EEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETT---SCEEEEETT-TTEEEE--E-ECCCSSCEEEEEE
T ss_pred EEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCC---CeEEEEECC-CCcEEE--E-EcCcCCceEEEEe
Confidence 6788887765322111 122222334567899999999873 579999987 554221 1 22 1222233444
Q ss_pred ccCC-cEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccc-eEEEee-CCcEEEEecC--cEEEeeCCC
Q 048136 177 LADG-SFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYP-FVYLVP-DGNLYIFANN--RSILLDPRA 250 (559)
Q Consensus 177 L~dG-~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp-~~~~l~-~G~iyv~Gg~--~~e~yDp~t 250 (559)
.+++ .+++.|+.++ ++.+| ..+.+ .. ..+..... .... .+...+ ++++++.|+. .+.+||.++
T Consensus 178 ~~~~~~~l~s~s~D~-~v~iwd~~~~~---~~--~~~~~~~~-----~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~ 246 (344)
T 4gqb_B 178 SPHKDSVFLSCSEDN-RILLWDTRCPK---PA--SQIGCSAP-----GYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKS 246 (344)
T ss_dssp CSSCTTEEEEEETTS-CEEEEETTSSS---CE--EECC---------CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC
T ss_pred cCCCCCceeeecccc-ccccccccccc---ee--eeeeccee-----eccceeeeecCCCCcceEEeccCCcEEEEECCC
Confidence 4566 5788887664 56777 44331 11 11110000 0011 122233 6788888864 578899987
Q ss_pred Ce
Q 048136 251 NY 252 (559)
Q Consensus 251 ~~ 252 (559)
++
T Consensus 247 ~~ 248 (344)
T 4gqb_B 247 TS 248 (344)
T ss_dssp --
T ss_pred Cc
Confidence 65
No 159
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=94.45 E-value=3.7 Score=39.51 Aligned_cols=139 Identities=14% Similarity=0.082 Sum_probs=71.0
Q ss_pred eEEEeCCCCCEEeCccCCCc--ccccCeecCCCc-EEEEcCCCCCCCeEEEEeCCCCCCeecCCCcccc----ccccceE
Q 048136 102 SVFYNVNTLQVTPLKVITDT--WCSSGGLDVNGN-LISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKD----GRWYATQ 174 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~--~c~~~~~l~dG~-i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~----~R~y~s~ 174 (559)
..+||+.+++....-..... .....++.+||+ +|+.+.. ...+.+||.. +.+-...-. +.. ...-..+
T Consensus 13 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~---~~~v~~~d~~-~~~~~~~~~-~~~~~~~~~~~~~~ 87 (337)
T 1pby_B 13 LVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNK---SESLVKIDLV-TGETLGRID-LSTPEERVKSLFGA 87 (337)
T ss_dssp EEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETT---TTEEEEEETT-TCCEEEEEE-CCBTTEEEECTTCE
T ss_pred EEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCC---CCeEEEEECC-CCCeEeeEE-cCCcccccccccce
Confidence 67899988765432222221 223445667885 5666543 2579999987 655332111 111 1123345
Q ss_pred EEccCCc-EEEEcC-------C---CCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEecCc
Q 048136 175 ALLADGS-FLIFGG-------R---DSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFANNR 242 (559)
Q Consensus 175 ~~L~dG~-VyvvGG-------~---~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg~~ 242 (559)
+.-+||+ +|+... . ....+.+| ..+.+ .....+. . . .-..+...+||+.+++++..
T Consensus 88 ~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~---~~~~~~~--~------~-~~~~~~~s~dg~~l~~~~~~ 155 (337)
T 1pby_B 88 ALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLS---RRKAFEA--P------R-QITMLAWARDGSKLYGLGRD 155 (337)
T ss_dssp EECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTE---EEEEEEC--C------S-SCCCEEECTTSSCEEEESSS
T ss_pred EECCCCCEEEEEecccccccccccccCceEEEEECCCCc---EEEEEeC--C------C-CcceeEECCCCCEEEEeCCe
Confidence 6667885 555431 0 12345566 43321 1111111 0 0 01123456788844455778
Q ss_pred EEEeeCCCCeEEEEC
Q 048136 243 SILLDPRANYVLREY 257 (559)
Q Consensus 243 ~e~yDp~t~~W~~~~ 257 (559)
+.+||..+++....+
T Consensus 156 i~~~d~~~~~~~~~~ 170 (337)
T 1pby_B 156 LHVMDPEAGTLVEDK 170 (337)
T ss_dssp EEEEETTTTEEEEEE
T ss_pred EEEEECCCCcEeeee
Confidence 899999998765433
No 160
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=94.27 E-value=0.82 Score=44.80 Aligned_cols=108 Identities=12% Similarity=0.075 Sum_probs=59.6
Q ss_pred eecCC---CcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccc-cccccceEEEccCCcEEEEcCCCCCceeEE-cCCCC
Q 048136 127 GLDVN---GNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALK-DGRWYATQALLADGSFLIFGGRDSFSYEYI-PAERT 201 (559)
Q Consensus 127 ~~l~d---G~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~-~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~ 201 (559)
..-++ |+++++|+. + ..+++||.. +........ +. +...-.+++..+||+.+++|+.++ .+.+| ..+.
T Consensus 46 ~~~~~~~~g~~l~~~~~-d--g~i~iw~~~-~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~s~~~dg-~v~iwd~~~~- 118 (368)
T 3mmy_A 46 SFSPPTLPGNFLIAGSW-A--NDVRCWEVQ-DSGQTIPKA-QQMHTGPVLDVCWSDDGSKVFTASCDK-TAKMWDLSSN- 118 (368)
T ss_dssp EECCTTSSSEEEEEEET-T--SEEEEEEEC-TTSCEEEEE-EEECSSCEEEEEECTTSSEEEEEETTS-EEEEEETTTT-
T ss_pred EEcCCCCCceEEEEECC-C--CcEEEEEcC-CCCceeEEE-eccccCCEEEEEECcCCCEEEEEcCCC-cEEEEEcCCC-
Confidence 34455 699999886 3 578999987 433222111 22 222233455667899999888764 56677 4332
Q ss_pred CCCcceeccccccccccccCCccceEEE--eeCCcEEEEec--CcEEEeeCCCCe
Q 048136 202 ENAYSIPFQFLRDTYDVLENNLYPFVYL--VPDGNLYIFAN--NRSILLDPRANY 252 (559)
Q Consensus 202 ~~~w~~~~p~l~~~~d~~~~~~yp~~~~--l~~G~iyv~Gg--~~~e~yDp~t~~ 252 (559)
.. ..+.. ... ... .+.. .++|++++.|+ ..+.+||..+++
T Consensus 119 ----~~-~~~~~-~~~----~v~-~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 119 ----QA-IQIAQ-HDA----PVK-TIHWIKAPNYSCVMTGSWDKTLKFWDTRSSN 162 (368)
T ss_dssp ----EE-EEEEE-CSS----CEE-EEEEEECSSCEEEEEEETTSEEEEECSSCSS
T ss_pred ----Cc-eeecc-ccC----ceE-EEEEEeCCCCCEEEEccCCCcEEEEECCCCc
Confidence 11 11111 000 011 1222 46888888876 457889988764
No 161
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=94.22 E-value=5.3 Score=40.40 Aligned_cols=72 Identities=10% Similarity=0.102 Sum_probs=37.5
Q ss_pred ceEEEccCCcEEEEcCCCCCceeEE-cCCCCCCCcceeccc----cccccccccCCccceEEEeeCC-cEEEEec--CcE
Q 048136 172 ATQALLADGSFLIFGGRDSFSYEYI-PAERTENAYSIPFQF----LRDTYDVLENNLYPFVYLVPDG-NLYIFAN--NRS 243 (559)
Q Consensus 172 ~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~----l~~~~d~~~~~~yp~~~~l~~G-~iyv~Gg--~~~ 243 (559)
.+++..++|+.++.| . ...+.+| ..... .-...... +.... ..-..+...++| ++++.|+ ..+
T Consensus 181 ~~~~~~~~~~~l~s~-~-d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~-----~~v~~~~~~p~~~~~l~s~~~dg~i 251 (447)
T 3dw8_B 181 NSISINSDYETYLSA-D-DLRINLWHLEITD--RSFNIVDIKPANMEELT-----EVITAAEFHPNSCNTFVYSSSKGTI 251 (447)
T ss_dssp CEEEECTTSSEEEEE-C-SSEEEEEETTEEE--EEEEEEECCCSSGGGCC-----CCEEEEEECSSCTTEEEEEETTSCE
T ss_pred EEEEEcCCCCEEEEe-C-CCeEEEEECCCCC--ceeeeeecccccccccC-----cceEEEEECCCCCcEEEEEeCCCeE
Confidence 345566789999887 4 3456667 33110 00000000 11100 011123345677 8888886 457
Q ss_pred EEeeCCCCe
Q 048136 244 ILLDPRANY 252 (559)
Q Consensus 244 e~yDp~t~~ 252 (559)
.+||.++++
T Consensus 252 ~iwd~~~~~ 260 (447)
T 3dw8_B 252 RLCDMRASA 260 (447)
T ss_dssp EEEETTTCS
T ss_pred EEEECcCCc
Confidence 899988765
No 162
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=94.19 E-value=3.1 Score=40.63 Aligned_cols=69 Identities=10% Similarity=0.009 Sum_probs=44.1
Q ss_pred ccCCcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEe--cCcEEEeeCCCCeE
Q 048136 177 LADGSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFA--NNRSILLDPRANYV 253 (559)
Q Consensus 177 L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~G--g~~~e~yDp~t~~W 253 (559)
+.++++|+..|..+. +..+ +++++ -.... +.. ..+.......+++||+.. .+.+.+||+++.+-
T Consensus 62 ~~~~~Ly~stG~~g~-v~~iD~~Tgk---v~~~~--l~~-------~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~ 128 (268)
T 3nok_A 62 FHQGHFFESTGHQGT-LRQLSLESAQ---PVWME--RLG-------NIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQR 128 (268)
T ss_dssp EETTEEEEEETTTTE-EEECCSSCSS---CSEEE--ECT-------TCCEEEEEECSSCEEEEESSSCEEEEEETTTTEE
T ss_pred EECCEEEEEcCCCCE-EEEEECCCCc---EEeEE--CCC-------CcceeEEEEeCCEEEEEEccCCEEEEEECCcCcE
Confidence 347899999998654 6666 76653 11111 211 233333445578999987 46789999999887
Q ss_pred EEECC
Q 048136 254 LREYP 258 (559)
Q Consensus 254 ~~~~p 258 (559)
...++
T Consensus 129 ~~ti~ 133 (268)
T 3nok_A 129 ERTTR 133 (268)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 76554
No 163
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=94.10 E-value=3.5 Score=39.98 Aligned_cols=65 Identities=5% Similarity=-0.065 Sum_probs=38.6
Q ss_pred eecCCCcEEEEcCCCCCCCeEEEEeCCCCCC-eecCCCccccccccceEEEccCCc-EEEEcCCCCCceeEE
Q 048136 127 GLDVNGNLISTGGFLGGSRTTRYLWGCPTCD-WTEYPTALKDGRWYATQALLADGS-FLIFGGRDSFSYEYI 196 (559)
Q Consensus 127 ~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~-W~~~~~~m~~~R~y~s~~~L~dG~-VyvvGG~~~~s~E~y 196 (559)
...++|+++++|+. + ..+++||.. +.+ .............-.+++..++|+ .+++|+.++ .+.+|
T Consensus 18 ~~s~~~~~l~~~~~-d--~~v~iw~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-~i~~w 84 (342)
T 1yfq_A 18 KIIPSKSLLLITSW-D--GSLTVYKFD-IQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQG-EILKV 84 (342)
T ss_dssp EEEGGGTEEEEEET-T--SEEEEEEEE-TTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTS-CEEEE
T ss_pred EEcCCCCEEEEEcC-C--CeEEEEEeC-CCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCC-eEEEE
Confidence 34568888888876 2 578888876 444 111111012233334555666899 888888664 46667
No 164
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=93.82 E-value=4.7 Score=41.32 Aligned_cols=116 Identities=9% Similarity=-0.065 Sum_probs=57.3
Q ss_pred CeecCC-CcEEEEcCCCCCCCeEEEEeCCCCC--------CeecCCCccc-cccccceEEEccCCc-EEEEcCCCCCcee
Q 048136 126 GGLDVN-GNLISTGGFLGGSRTTRYLWGCPTC--------DWTEYPTALK-DGRWYATQALLADGS-FLIFGGRDSFSYE 194 (559)
Q Consensus 126 ~~~l~d-G~i~v~GG~~~g~~~v~~ydp~~t~--------~W~~~~~~m~-~~R~y~s~~~L~dG~-VyvvGG~~~~s~E 194 (559)
..+.++ ++++++|+. + ..+.+||.. +. ....+.. +. +...-.+++..++++ ++++|+.++ .+.
T Consensus 134 l~~~p~~~~~lat~~~-d--g~V~vwd~~-~~~~~~~~~~~~~~~~~-~~~h~~~v~~l~~~~~~~~~l~s~~~dg-~i~ 207 (430)
T 2xyi_A 134 ARYMPQNACVIATKTP-S--SDVLVFDYT-KHPSKPEPSGECQPDLR-LRGHQKEGYGLSWNPNLNGYLLSASDDH-TIC 207 (430)
T ss_dssp EEEETTEEEEEEEECS-S--SCEEEEEGG-GSCSSCCTTCCCCCSEE-EECCSSCCCCEEECTTSTTEEEEECTTS-CEE
T ss_pred EEECCCCCcEEEEECC-C--CcEEEEECC-CcccccCccccCCCcEE-ecCCCCCeEEEEeCCCCCCeEEEEeCCC-eEE
Confidence 344555 678888876 3 468889875 31 1222211 22 112223455566777 888887664 466
Q ss_pred EE-cCCCCCCCcceeccccccccccccCCccceEEEee-CCcEEEEec--CcEEEeeCCCC
Q 048136 195 YI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVP-DGNLYIFAN--NRSILLDPRAN 251 (559)
Q Consensus 195 ~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~-~G~iyv~Gg--~~~e~yDp~t~ 251 (559)
+| ........+ ...+...-. .+ ...-..+...+ ++++|+.++ ..+.+||.++.
T Consensus 208 vwd~~~~~~~~~-~~~~~~~~~-~h--~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~ 264 (430)
T 2xyi_A 208 LWDINATPKEHR-VIDAKNIFT-GH--TAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNN 264 (430)
T ss_dssp EEETTSCCBGGG-EEECSEEEC-CC--SSCEEEEEECSSCTTEEEEEETTSEEEEEETTCS
T ss_pred EEeCCCCCCCCc-eeccceeec-CC--CCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCC
Confidence 77 333210001 111110000 00 00011122334 678888875 46788998865
No 165
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=93.77 E-value=7 Score=40.19 Aligned_cols=111 Identities=12% Similarity=-0.018 Sum_probs=57.6
Q ss_pred eecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCc-EEEEcCCCCCceeEE-cCCCCCCC
Q 048136 127 GLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGS-FLIFGGRDSFSYEYI-PAERTENA 204 (559)
Q Consensus 127 ~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~-VyvvGG~~~~s~E~y-P~~~~~~~ 204 (559)
++..+|+||++... ...+++||+. +..-..+... ... .+ .+.-++|+ +|+........+-++ +..+
T Consensus 137 a~d~~g~lyv~d~~---~~~I~~id~~-~g~~~~~~~~--~~~-~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~---- 204 (409)
T 3hrp_A 137 AAVGNNTVLAYQRD---DPRVRLISVD-DNKVTTVHPG--FKG-GK-PAVTKDKQRVYSIGWEGTHTVYVYMKASG---- 204 (409)
T ss_dssp EECSTTEEEEEETT---TTEEEEEETT-TTEEEEEEET--CCB-CB-CEECTTSSEEEEEBSSTTCEEEEEEGGGT----
T ss_pred EEeCCCCEEEEecC---CCcEEEEECC-CCEEEEeecc--CCC-Cc-eeEecCCCcEEEEecCCCceEEEEEcCCC----
Confidence 44578999998643 3689999998 6654443221 111 12 45556765 555443222244445 4432
Q ss_pred cc-eec-cccccccccccCCccceEEEee-CCcEEEEec-CcEEEeeCCCCeEE
Q 048136 205 YS-IPF-QFLRDTYDVLENNLYPFVYLVP-DGNLYIFAN-NRSILLDPRANYVL 254 (559)
Q Consensus 205 w~-~~~-p~l~~~~d~~~~~~yp~~~~l~-~G~iyv~Gg-~~~e~yDp~t~~W~ 254 (559)
+. ... ...... ...-..+.+.+ +|+||+... ..+.+||+.+....
T Consensus 205 ~~~~~~g~~~~~~-----~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~ 253 (409)
T 3hrp_A 205 WAPTRIGQLGSTF-----SGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVT 253 (409)
T ss_dssp TCEEEEEECCTTS-----CSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEE
T ss_pred ceeEEeeeccchh-----cCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEE
Confidence 21 111 000000 01112234556 799999543 35789999877644
No 166
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=93.55 E-value=5.4 Score=38.19 Aligned_cols=67 Identities=7% Similarity=-0.148 Sum_probs=39.3
Q ss_pred cCeecCCCc-EEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCcEEEEcCCCCCceeEE-cCCC
Q 048136 125 SGGLDVNGN-LISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGSFLIFGGRDSFSYEYI-PAER 200 (559)
Q Consensus 125 ~~~~l~dG~-i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~ 200 (559)
+.+..++|+ ||+++.. ...+.+||+. +. ...... .. ..-.+.+.-+||++|+..... ..+.+| ++++
T Consensus 32 g~~~d~~g~~l~~~~~~---~~~i~~~~~~-~~-~~~~~~--~~-~~~~~l~~~~dg~l~v~~~~~-~~i~~~d~~~g 100 (296)
T 3e5z_A 32 GPVYVPARSAVIFSDVR---QNRTWAWSDD-GQ-LSPEMH--PS-HHQNGHCLNKQGHLIACSHGL-RRLERQREPGG 100 (296)
T ss_dssp EEEEEGGGTEEEEEEGG---GTEEEEEETT-SC-EEEEES--SC-SSEEEEEECTTCCEEEEETTT-TEEEEECSTTC
T ss_pred CCeEeCCCCEEEEEeCC---CCEEEEEECC-CC-eEEEEC--CC-CCcceeeECCCCcEEEEecCC-CeEEEEcCCCC
Confidence 344556787 8888754 2578999998 65 544321 11 112345555789998875422 345666 5444
No 167
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=93.48 E-value=6.6 Score=38.92 Aligned_cols=215 Identities=12% Similarity=0.058 Sum_probs=101.9
Q ss_pred CCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCcEEEEcCCCCCceeEE-cC-CCCCCCccee
Q 048136 131 NGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGSFLIFGGRDSFSYEYI-PA-ERTENAYSIP 208 (559)
Q Consensus 131 dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~-~~~~~~w~~~ 208 (559)
++++|++|-. + .+.+-+=. ..+|+++......+-.....+...++++|++|... .+| .. .+ ..|...
T Consensus 89 ~~~~~~~g~~--g--~i~~S~Dg-G~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g----~v~~S~DgG--~tW~~~ 157 (327)
T 2xbg_A 89 GNEGWIVGEP--P--IMLHTTDG-GQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNVG----AIYRTKDSG--KNWQAL 157 (327)
T ss_dssp TTEEEEEEET--T--EEEEESST-TSSCEECCCCTTCSSCEEEEEEEETTEEEEEETTC----CEEEESSTT--SSEEEE
T ss_pred CCeEEEEECC--C--eEEEECCC-CCCceECccccCCCCCeEEEEEECCCCEEEEeCCc----cEEEEcCCC--CCCEEe
Confidence 5778887532 2 23322212 46899875311111112234455678999887532 244 22 22 246543
Q ss_pred ccccccccccccCCccceEEEeeCCcEEEEecCc-EEEe-eCCCCeEEEECCCCCCCCCcccCCCceeeccccccccccc
Q 048136 209 FQFLRDTYDVLENNLYPFVYLVPDGNLYIFANNR-SILL-DPRANYVLREYPPLPGGARNYPSTSTSVLLPLKLYRDYYA 286 (559)
Q Consensus 209 ~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg~~-~e~y-Dp~t~~W~~~~p~mp~~~~~~p~~g~~v~lpl~~~~~~~~ 286 (559)
...... ....+...++|+++++|... +.+- |....+|.. +.. +. ... -..+.+ .
T Consensus 158 ~~~~~~--------~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~-~~~-~~-~~~----~~~~~~--~------- 213 (327)
T 2xbg_A 158 VQEAIG--------VMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEP-HNR-TT-SRR----LHNMGF--T------- 213 (327)
T ss_dssp ECSCCC--------CEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEE-EEC-CS-SSC----EEEEEE--C-------
T ss_pred ecCCCc--------ceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeE-CCC-CC-CCc----cceeEE--C-------
Confidence 321111 11233445688888877432 2222 333578884 421 11 111 122221 1
Q ss_pred ccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeeec---CCCCcccccEEEeeCCeEEEEcCcCCCC
Q 048136 287 RVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTEK---MPTPRVMSDGVLLPTGDVLLINGAELGS 363 (559)
Q Consensus 287 ~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~---M~~~R~~~~av~LpdG~V~vvGG~~~g~ 363 (559)
.++++|+++.. +. +.+.+ .+...+|+... ++......+.+..+++++|++|+..
T Consensus 214 -~~g~~~~~~~~--G~----------------~~~s~-~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g--- 270 (327)
T 2xbg_A 214 -PDGRLWMIVNG--GK----------------IAFSD-PDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAG--- 270 (327)
T ss_dssp -TTSCEEEEETT--TE----------------EEEEE-TTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTT---
T ss_pred -CCCCEEEEeCC--ce----------------EEEec-CCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCC---
Confidence 25788877642 11 00110 01125788753 3333233323344688999987632
Q ss_pred CCccCCCCCCcccEEEeCCCCCCCeEEecCC-CCCCccceeeeEECCCCceEEeCC
Q 048136 364 AGWKDADKPCFKPLLYKPSKPPGSRFTELAP-SDIPRMYHSVANLLPDGRVFVGGS 418 (559)
Q Consensus 364 ~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~-~~~~R~yhs~a~llpdG~Vlv~GG 418 (559)
. +|- .++.|++|+.+.. ...+..+++++.. .+++++++|.
T Consensus 271 -----------~--i~~-S~DgG~tW~~~~~~~~~~~~~~~v~~~-~~~~~~~~G~ 311 (327)
T 2xbg_A 271 -----------A--LLC-SQDGGQTWQQDVDVKKVPSNFYKILFF-SPDQGFILGQ 311 (327)
T ss_dssp -----------C--EEE-ESSTTSSCEECGGGTTSSSCCCEEEEE-ETTEEEEECS
T ss_pred -----------e--EEE-eCCCCcccEEcCccCCCCCCeEEEEEE-CCCceEEEcC
Confidence 1 121 1345669998753 3334444545443 6778777765
No 168
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=93.43 E-value=4.6 Score=41.65 Aligned_cols=73 Identities=19% Similarity=0.222 Sum_probs=37.8
Q ss_pred cccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCccceeeeEECCCCceEEeCCCCC
Q 048136 342 MSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANLLPDGRVFVGGSNDN 421 (559)
Q Consensus 342 ~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~llpdG~Vlv~GG~~~ 421 (559)
.|..++.-||+||..|-...|.-|.....+....+..-..-.+ +...++ .-.+|+ ++|..||+||.-|.+..
T Consensus 304 ~ht~alt~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~---~v~~ia----~G~~hs-~alt~~G~v~~wG~n~~ 375 (423)
T 3mvd_K 304 HHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTE---KIVSVG----CGEVCS-YAVTIDGKLYSWGSGVN 375 (423)
T ss_dssp SEEEEEETTCCEEEEECCGGGTTCSSSCCSCEEEEEECTTCCS---CEEEEE----EETTEE-EEEETTSCEEEEECCTT
T ss_pred CeEEEEeCCCcEEEEECCCCCCCCCCCccccccCceEeccCCC---CEEEEE----cCCCeE-EEEcCCCCEEEECCCCC
Confidence 3445666799999998654443332211111111111111111 233322 234675 45578999999998765
Q ss_pred C
Q 048136 422 D 422 (559)
Q Consensus 422 ~ 422 (559)
+
T Consensus 376 G 376 (423)
T 3mvd_K 376 N 376 (423)
T ss_dssp S
T ss_pred C
Confidence 4
No 169
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=93.42 E-value=6.5 Score=38.69 Aligned_cols=133 Identities=11% Similarity=0.051 Sum_probs=67.5
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCC-
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADG- 180 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG- 180 (559)
..+||..+++....-..+........+.+||+.+++||.. ..+++||.. ...-......-....+-.+++.-+++
T Consensus 100 v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d---~~i~~wd~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~ 175 (343)
T 2xzm_R 100 LRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAE---REIKLWNIL-GECKFSSAEKENHSDWVSCVRYSPIMK 175 (343)
T ss_dssp EEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETT---SCEEEEESS-SCEEEECCTTTSCSSCEEEEEECCCCC
T ss_pred EEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCC---CEEEEEecc-CCceeeeecccCCCceeeeeeeccccc
Confidence 6889988876533222222222234456799999999863 578899975 33222111100122222223333333
Q ss_pred ---------cEEEEcCCCCCceeEEcCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEecC--cEEEeeCC
Q 048136 181 ---------SFLIFGGRDSFSYEYIPAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFANN--RSILLDPR 249 (559)
Q Consensus 181 ---------~VyvvGG~~~~s~E~yP~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg~--~~e~yDp~ 249 (559)
..++.|+.++ .+.+|.... .....+ .... ..-..+...++|+.++.|+. .+.+||..
T Consensus 176 ~~~~~~~~~~~l~s~~~d~-~i~iwd~~~-----~~~~~~-~~h~-----~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~ 243 (343)
T 2xzm_R 176 SANKVQPFAPYFASVGWDG-RLKVWNTNF-----QIRYTF-KAHE-----SNVNHLSISPNGKYIATGGKDKKLLIWDIL 243 (343)
T ss_dssp SCSCCCSSCCEEEEEETTS-EEEEEETTT-----EEEEEE-ECCS-----SCEEEEEECTTSSEEEEEETTCEEEEEESS
T ss_pred cccccCCCCCEEEEEcCCC-EEEEEcCCC-----ceeEEE-cCcc-----ccceEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 6777777654 456663211 111111 1100 01112334579999988874 57788874
Q ss_pred C
Q 048136 250 A 250 (559)
Q Consensus 250 t 250 (559)
.
T Consensus 244 ~ 244 (343)
T 2xzm_R 244 N 244 (343)
T ss_dssp C
T ss_pred C
Confidence 3
No 170
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=93.36 E-value=5.5 Score=37.66 Aligned_cols=217 Identities=11% Similarity=0.091 Sum_probs=106.7
Q ss_pred eecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccc-cccceEEEccCCcEEEEcCCCCCceeEE-cCCCCCCC
Q 048136 127 GLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDG-RWYATQALLADGSFLIFGGRDSFSYEYI-PAERTENA 204 (559)
Q Consensus 127 ~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~-R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~ 204 (559)
+...+|+|++.... ...+.+||+. .++.... +... ..-.+.+.-++|++|+..... ..+.+| +. ++
T Consensus 26 ~~d~~g~l~v~~~~---~~~v~~~~~~--~~~~~~~--~~~~~~~~~~i~~~~~g~l~v~~~~~-~~v~~~d~~-g~--- 93 (300)
T 2qc5_A 26 TSSEDGKVWFTQHK---ANKISSLDQS--GRIKEFE--VPTPDAKVMCLIVSSLGDIWFTENGA-NKIGKLSKK-GG--- 93 (300)
T ss_dssp EECTTSCEEEEETT---TTEEEEECTT--SCEEEEE--CSSTTCCEEEEEECTTSCEEEEETTT-TEEEEECTT-SC---
T ss_pred eECCCCCEEEEcCC---CCeEEEECCC--CceEEEE--CCCCCCcceeEEECCCCCEEEEecCC-CeEEEECCC-CC---
Confidence 44568999997532 2578899986 4444331 1111 122345555689999976432 234555 44 32
Q ss_pred cceeccccccccccccCCccce-EEEeeCCcEEEEe--cCcEEEeeCCCCeEEEECCCCCCCCCcccCCCceeecccccc
Q 048136 205 YSIPFQFLRDTYDVLENNLYPF-VYLVPDGNLYIFA--NNRSILLDPRANYVLREYPPLPGGARNYPSTSTSVLLPLKLY 281 (559)
Q Consensus 205 w~~~~p~l~~~~d~~~~~~yp~-~~~l~~G~iyv~G--g~~~e~yDp~t~~W~~~~p~mp~~~~~~p~~g~~v~lpl~~~ 281 (559)
.. ....... ...+. +...++|+||+.. +..+.+||+. ++... .. ++. ....| .++.+.
T Consensus 94 ~~-~~~~~~~-------~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~-~~-~~~-~~~~~---~~i~~d---- 154 (300)
T 2qc5_A 94 FT-EYPLPQP-------DSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYE-YD-LPN-KGSYP---AFITLG---- 154 (300)
T ss_dssp EE-EEECSST-------TCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEE-EE-CSS-TTCCE---EEEEEC----
T ss_pred eE-EecCCCC-------CCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEE-cc-CCC-CCCCc---eeEEEC----
Confidence 21 1111100 01233 2334589999876 3568889998 55442 21 221 11122 122221
Q ss_pred cccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeeecCCCCccccc-EEEeeCCeEEEEcCcC
Q 048136 282 RDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTEKMPTPRVMSD-GVLLPTGDVLLINGAE 360 (559)
Q Consensus 282 ~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~~M~~~R~~~~-av~LpdG~V~vvGG~~ 360 (559)
.+++||+..-.. ..+.+||+. .+.....++..-.... .+.-++|+||+..-..
T Consensus 155 ------~~g~l~v~~~~~-----------------~~i~~~~~~---g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~ 208 (300)
T 2qc5_A 155 ------SDNALWFTENQN-----------------NSIGRITNT---GKLEEYPLPTNAAAPVGITSGNDGALWFVEIMG 208 (300)
T ss_dssp ------TTSSEEEEETTT-----------------TEEEEECTT---CCEEEEECSSTTCCEEEEEECTTSSEEEEETTT
T ss_pred ------CCCCEEEEecCC-----------------CeEEEECCC---CcEEEeeCCCCCCCcceEEECCCCCEEEEccCC
Confidence 257788765322 123445442 2333222221111111 2344689999865321
Q ss_pred CCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCccceeeeEECCCCceEEeCC
Q 048136 361 LGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANLLPDGRVFVGGS 418 (559)
Q Consensus 361 ~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~llpdG~Vlv~GG 418 (559)
..+.+||+ +. ++..... +..-......++.++|+||++..
T Consensus 209 -------------~~i~~~~~-~g---~~~~~~~-~~~~~~~~~i~~d~~g~l~v~~~ 248 (300)
T 2qc5_A 209 -------------NKIGRITT-TG---EISEYDI-PTPNARPHAITAGKNSEIWFTEW 248 (300)
T ss_dssp -------------TEEEEECT-TC---CEEEEEC-SSTTCCEEEEEECSTTCEEEEET
T ss_pred -------------CEEEEEcC-CC---cEEEEEC-CCCCCCceEEEECCCCCEEEecc
Confidence 15788998 44 4544311 11111112345678999999864
No 171
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=93.05 E-value=6.4 Score=37.56 Aligned_cols=114 Identities=13% Similarity=0.088 Sum_probs=58.7
Q ss_pred ecCCCcEEEEcCCCCCCCeEEEEeCCC-CCCeecCCCcccccccc-ceEEEcc--CCcEEEEcCCCCCceeEE-cCCCCC
Q 048136 128 LDVNGNLISTGGFLGGSRTTRYLWGCP-TCDWTEYPTALKDGRWY-ATQALLA--DGSFLIFGGRDSFSYEYI-PAERTE 202 (559)
Q Consensus 128 ~l~dG~i~v~GG~~~g~~~v~~ydp~~-t~~W~~~~~~m~~~R~y-~s~~~L~--dG~VyvvGG~~~~s~E~y-P~~~~~ 202 (559)
.-++|+++++|+. + ..+++||... ...+..... +...... .+++..+ |++.++.|+.++ .+.+| ...+..
T Consensus 19 ~~~~~~~l~~~~~-d--g~i~iw~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~d~~~l~s~~~dg-~v~vwd~~~~~~ 93 (351)
T 3f3f_A 19 YDFYGRHVATCSS-D--QHIKVFKLDKDTSNWELSDS-WRAHDSSIVAIDWASPEYGRIIASASYDK-TVKLWEEDPDQE 93 (351)
T ss_dssp ECSSSSEEEEEET-T--SEEEEEEECSSSCCEEEEEE-EECCSSCEEEEEECCGGGCSEEEEEETTS-CEEEEEECTTSC
T ss_pred EcCCCCEEEEeeC-C--CeEEEEECCCCCCcceecce-eccCCCcEEEEEEcCCCCCCEEEEEcCCC-eEEEEecCCCcc
Confidence 3468899999886 3 4788888761 223333221 2222222 2333344 589999998764 46666 433210
Q ss_pred ----CCcceeccccccccccccCCccceEEEeeC--CcEEEEecC--cEEEeeCCCCe
Q 048136 203 ----NAYSIPFQFLRDTYDVLENNLYPFVYLVPD--GNLYIFANN--RSILLDPRANY 252 (559)
Q Consensus 203 ----~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~--G~iyv~Gg~--~~e~yDp~t~~ 252 (559)
..|.....+ .... ..-..+...++ +++++.|+. .+.+||..+.+
T Consensus 94 ~~~~~~~~~~~~~-~~~~-----~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 94 ECSGRRWNKLCTL-NDSK-----GSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPS 145 (351)
T ss_dssp TTSSCSEEEEEEE-CCCS-----SCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTT
T ss_pred cccccCcceeeee-cccC-----CceeEEEEcCCCCCcEEEEecCCCcEEEecCCChH
Confidence 011111111 1100 01112233456 888888764 57889987653
No 172
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=92.84 E-value=8 Score=38.17 Aligned_cols=106 Identities=12% Similarity=0.069 Sum_probs=55.7
Q ss_pred eecC-CCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEcc---CCcEEEEcCCCCCceeEE-cCCCC
Q 048136 127 GLDV-NGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLA---DGSFLIFGGRDSFSYEYI-PAERT 201 (559)
Q Consensus 127 ~~l~-dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~---dG~VyvvGG~~~~s~E~y-P~~~~ 201 (559)
...+ ++.++++|+.. ..+.+||.. +.+-... +.....-.+....+ +++++++|+.++ .+.+| ..+..
T Consensus 106 ~~~~~~~~~l~s~~~d---~~i~iwd~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~d~~~~~ 177 (408)
T 4a11_B 106 QWYPHDTGMFTSSSFD---KTLKVWDTN-TLQTADV---FNFEETVYSHHMSPVSTKHCLVAVGTRGP-KVQLCDLKSGS 177 (408)
T ss_dssp EECTTCTTCEEEEETT---SEEEEEETT-TTEEEEE---EECSSCEEEEEECSSCSSCCEEEEEESSS-SEEEEESSSSC
T ss_pred EEccCCCcEEEEEeCC---CeEEEeeCC-CCcccee---ccCCCceeeeEeecCCCCCcEEEEEcCCC-eEEEEeCCCcc
Confidence 3445 67788888762 579999987 5543322 12222222333333 455888887654 46666 43321
Q ss_pred CCCcceeccccccccccccCCccceEEEeeCCc-EEEEecC--cEEEeeCCCC
Q 048136 202 ENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGN-LYIFANN--RSILLDPRAN 251 (559)
Q Consensus 202 ~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~-iyv~Gg~--~~e~yDp~t~ 251 (559)
.. ..+ .... ..-..+...++++ +++.|+. .+.+||.++.
T Consensus 178 ---~~--~~~-~~~~-----~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~ 219 (408)
T 4a11_B 178 ---CS--HIL-QGHR-----QEILAVSWSPRYDYILATASADSRVKLWDVRRA 219 (408)
T ss_dssp ---CC--EEE-CCCC-----SCEEEEEECSSCTTEEEEEETTSCEEEEETTCS
T ss_pred ---ee--eee-cCCC-----CcEEEEEECCCCCcEEEEEcCCCcEEEEECCCC
Confidence 11 111 1100 0111233456776 7777763 5788998765
No 173
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=92.55 E-value=9.7 Score=38.39 Aligned_cols=24 Identities=21% Similarity=0.302 Sum_probs=18.3
Q ss_pred eecCCCcEEEEcCCCCCCCeEEEEeCC
Q 048136 127 GLDVNGNLISTGGFLGGSRTTRYLWGC 153 (559)
Q Consensus 127 ~~l~dG~i~v~GG~~~g~~~v~~ydp~ 153 (559)
.+-+||+++++|+. + ..+++||..
T Consensus 35 ~~s~~g~~la~g~~-d--g~v~iw~~~ 58 (447)
T 3dw8_B 35 EFNHSGELLATGDK-G--GRVVIFQQE 58 (447)
T ss_dssp EECSSSSEEEEEET-T--SEEEEEEEC
T ss_pred EECCCCCEEEEEcC-C--CeEEEEEec
Confidence 34568999999987 3 478888865
No 174
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=92.34 E-value=4 Score=40.81 Aligned_cols=47 Identities=15% Similarity=-0.003 Sum_probs=28.9
Q ss_pred eEEEeCCCCCEEeCccC---CCcccccCeecCCCcEEEEcCCCCCCCeEEEEeC
Q 048136 102 SVFYNVNTLQVTPLKVI---TDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWG 152 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~---~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp 152 (559)
...+|+.+++.+.+... ....+...++.+||+.+.++... .+.+||.
T Consensus 18 ~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~----~v~~~~~ 67 (365)
T 1jof_A 18 TVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK----KWSSFAV 67 (365)
T ss_dssp EEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT----EEEEEEE
T ss_pred EEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc----eEEEEEE
Confidence 45678888888765432 11234445567899866555541 6888885
No 175
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=92.29 E-value=5.2 Score=39.32 Aligned_cols=139 Identities=9% Similarity=0.004 Sum_probs=77.4
Q ss_pred eEEEeCCCCCEEeCcc-CCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCee--cCCCccccccccceEEEcc
Q 048136 102 SVFYNVNTLQVTPLKV-ITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWT--EYPTALKDGRWYATQALLA 178 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~-~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~--~~~~~m~~~R~y~s~~~L~ 178 (559)
..+||..+++...... .+...+......+||+++++|+. + ..+++||.. +.+-. .+. ..+...-.+++.-+
T Consensus 151 i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~-d--g~i~iwd~~-~~~~~~~~~~--~~h~~~v~~l~fs~ 224 (343)
T 3lrv_A 151 IGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSP-D--GILDVYNLS-SPDQASSRFP--VDEEAKIKEVKFAD 224 (343)
T ss_dssp EEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECT-T--SCEEEEESS-CTTSCCEECC--CCTTSCEEEEEECT
T ss_pred EEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcC-C--CEEEEEECC-CCCCCccEEe--ccCCCCEEEEEEeC
Confidence 6789998887644332 22223334556789999999986 3 589999987 55432 111 11222333455567
Q ss_pred CCcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEE--e-cCcEEEeeC--CCCe
Q 048136 179 DGSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIF--A-NNRSILLDP--RANY 252 (559)
Q Consensus 179 dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~--G-g~~~e~yDp--~t~~ 252 (559)
||+.++.|+. . .+.+| ..+.+ .-....++.... .+... ..+...++|+.++. + +..+.+||. ....
T Consensus 225 ~g~~l~s~~~-~-~v~iwd~~~~~--~~~~~~~~~~~~---~~~~~-~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~ 296 (343)
T 3lrv_A 225 NGYWMVVECD-Q-TVVCFDLRKDV--GTLAYPTYTIPE---FKTGT-VTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKN 296 (343)
T ss_dssp TSSEEEEEES-S-BEEEEETTSST--TCBSSCCCBC--------CC-EEEEECTTSSEEEEEETTTTEEEEEEECTTTCS
T ss_pred CCCEEEEEeC-C-eEEEEEcCCCC--cceeeccccccc---ccccc-eEEEECCCCCEEEEecCCCCcEEEEEEcccccc
Confidence 8999999883 3 77888 44321 000001100000 00000 12344568998888 4 456777876 4456
Q ss_pred EE
Q 048136 253 VL 254 (559)
Q Consensus 253 W~ 254 (559)
|.
T Consensus 297 ~~ 298 (343)
T 3lrv_A 297 WT 298 (343)
T ss_dssp EE
T ss_pred eE
Confidence 76
No 176
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=92.08 E-value=5.4 Score=38.80 Aligned_cols=84 Identities=10% Similarity=-0.092 Sum_probs=48.0
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCC-CCCCeEEEEeCCCCCCeec-CCCccccccccceEEEccC
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFL-GGSRTTRYLWGCPTCDWTE-YPTALKDGRWYATQALLAD 179 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~-~g~~~v~~ydp~~t~~W~~-~~~~m~~~R~y~s~~~L~d 179 (559)
..+||+.+++++.+.........+-+...||++++..... .....+.+||+. +.+... +.. ......-...+.-++
T Consensus 68 i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~-~~~~~~~~~~-~~~~~~~~~i~~d~~ 145 (333)
T 2dg1_A 68 IFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATEN-GDNLQDIIED-LSTAYCIDDMVFDSK 145 (333)
T ss_dssp EEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTT-SCSCEEEECS-SSSCCCEEEEEECTT
T ss_pred EEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCC-CCEEEEEEcc-CccCCcccceEECCC
Confidence 5678998888776542222222233445789998875321 112478999998 665432 221 112222234556678
Q ss_pred CcEEEEcC
Q 048136 180 GSFLIFGG 187 (559)
Q Consensus 180 G~VyvvGG 187 (559)
|++|+...
T Consensus 146 g~l~v~~~ 153 (333)
T 2dg1_A 146 GGFYFTDF 153 (333)
T ss_dssp SCEEEEEC
T ss_pred CCEEEEec
Confidence 99998754
No 177
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=91.99 E-value=10 Score=37.53 Aligned_cols=63 Identities=8% Similarity=-0.018 Sum_probs=37.7
Q ss_pred EEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCc---------------cce---eeeE
Q 048136 345 GVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPR---------------MYH---SVAN 406 (559)
Q Consensus 345 av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R---------------~yh---s~a~ 406 (559)
...-|||+.++.|+.+. ++.+||...+...++..+..+-.++ ..+ ....
T Consensus 246 ~~~s~~~~~l~s~s~d~-------------~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 312 (355)
T 3vu4_A 246 MKWSTDGSKLAVVSDKW-------------TLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIA 312 (355)
T ss_dssp EEECTTSCEEEEEETTC-------------EEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEE
T ss_pred EEECCCCCEEEEEECCC-------------EEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEE
Confidence 34568999999987651 6788887665333444432211110 000 3456
Q ss_pred ECCCCceEEeCCCC
Q 048136 407 LLPDGRVFVGGSND 420 (559)
Q Consensus 407 llpdG~Vlv~GG~~ 420 (559)
..+||+.+++|+..
T Consensus 313 ~~~d~~~l~~~~~d 326 (355)
T 3vu4_A 313 WISESSLVVVWPHT 326 (355)
T ss_dssp ESSSSEEEEEETTT
T ss_pred EeCCCCEEEEEeCC
Confidence 77899988888753
No 178
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=91.79 E-value=19 Score=40.14 Aligned_cols=252 Identities=10% Similarity=0.074 Sum_probs=121.7
Q ss_pred eEEEeCCCCCEEeCccCC--------CcccccCeecCCCc-EEEEcCCCCCCCeEEEEeCCCCCCeecCCC---cccccc
Q 048136 102 SVFYNVNTLQVTPLKVIT--------DTWCSSGGLDVNGN-LISTGGFLGGSRTTRYLWGCPTCDWTEYPT---ALKDGR 169 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~--------~~~c~~~~~l~dG~-i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~---~m~~~R 169 (559)
..+||+.+++++...... .....+-....+|+ |++ |... ..+.+||+. +.++..... .+...+
T Consensus 379 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWi-gt~~---~Gl~~~d~~-~~~~~~~~~~~~~l~~~~ 453 (795)
T 4a2l_A 379 LNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYI-GTHA---GGLSILHRN-SGQVENFNQRNSQLVNEN 453 (795)
T ss_dssp EEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEE-EETT---TEEEEEETT-TCCEEEECTTTSCCSCSC
T ss_pred eEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEE-EeCc---CceeEEeCC-CCcEEEeecCCCCcCCCe
Confidence 567888888887654211 11111122335788 665 3321 357889998 777765431 122111
Q ss_pred ccceEEEccCCcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEecCcEEEeeC
Q 048136 170 WYATQALLADGSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFANNRSILLDP 248 (559)
Q Consensus 170 ~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg~~~e~yDp 248 (559)
-.+...-.+|++++... . ..-+| |.+++ +...... ... .....+.-.....-.+|+|++.......+||+
T Consensus 454 -v~~i~~d~~g~lwigt~-~--Gl~~~~~~~~~---~~~~~~~-~~~-~~~~~~~i~~i~~d~~g~lWigt~~Gl~~~~~ 524 (795)
T 4a2l_A 454 -VYAILPDGEGNLWLGTL-S--ALVRFNPEQRS---FTTIEKE-KDG-TPVVSKQITTLFRDSHKRLWIGGEEGLSVFKQ 524 (795)
T ss_dssp -EEEEEECSSSCEEEEES-S--CEEEEETTTTE---EEECCBC-TTC-CBCCCCCEEEEEECTTCCEEEEESSCEEEEEE
T ss_pred -eEEEEECCCCCEEEEec-C--ceeEEeCCCCe---EEEcccc-ccc-cccCCceEEEEEECCCCCEEEEeCCceEEEeC
Confidence 22344445688887543 2 24456 65432 2221110 000 00000111122233578999876667889999
Q ss_pred CCCeEEEECCCCCCCCCcccCCCceeecccccccccccccCcEEEEEcCCCCccccccccccccccccCceEEEEecCCC
Q 048136 249 RANYVLREYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPD 328 (559)
Q Consensus 249 ~t~~W~~~~p~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~ 328 (559)
.++++ . +...... ...+......++. + .+|+|++.... + ..+||+..
T Consensus 525 ~~~~~-~-~~~~~~~-~~l~~~~i~~i~~-------d--~~g~lWigT~~--G-----------------l~~~d~~~-- 571 (795)
T 4a2l_A 525 EGLDI-Q-KASILPV-SNVTKLFTNCIYE-------A--SNGIIWVGTRE--G-----------------FYCFNEKD-- 571 (795)
T ss_dssp ETTEE-E-ECCCSCS-CGGGGSCEEEEEE-------C--TTSCEEEEESS--C-----------------EEEEETTT--
T ss_pred CCCeE-E-EecCCCC-CCCCCCeeEEEEE-------C--CCCCEEEEeCC--C-----------------ceeECCCC--
Confidence 99887 3 3211000 0011001111110 1 26777765321 1 22333321
Q ss_pred Cceee---e-cCCCCcccccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecC---CCCCCccc
Q 048136 329 PVWTT---E-KMPTPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELA---PSDIPRMY 401 (559)
Q Consensus 329 ~~W~~---~-~M~~~R~~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~---~~~~~R~y 401 (559)
.+++. . .++...... .+.-.+|+|++... . -+.+|||++. +++... .++.....
T Consensus 572 ~~~~~~~~~~gl~~~~i~~-i~~d~~g~lWi~t~--~-------------Gl~~~~~~~~---~~~~~~~~dGl~~~~f~ 632 (795)
T 4a2l_A 572 KQIKRYNTTNGLPNNVVYG-ILEDSFGRLWLSTN--R-------------GISCFNPETE---KFRNFTESDGLQSNQFN 632 (795)
T ss_dssp TEEEEECGGGTCSCSCEEE-EEECTTSCEEEEET--T-------------EEEEEETTTT---EEEEECGGGTCSCSCEE
T ss_pred CcEEEeCCCCCCchhheEE-EEECCCCCEEEEcC--C-------------ceEEEcCCCC---cEEEcCCcCCCccccCc
Confidence 22322 1 344433322 22334688988652 1 2468999988 887543 23333332
Q ss_pred eeeeEECCCCceEEeCCC
Q 048136 402 HSVANLLPDGRVFVGGSN 419 (559)
Q Consensus 402 hs~a~llpdG~Vlv~GG~ 419 (559)
..+++..+||++|++|.+
T Consensus 633 ~~~~~~~~~G~l~~g~~~ 650 (795)
T 4a2l_A 633 TASYCRTSVGQMYFGGIN 650 (795)
T ss_dssp EEEEEECTTSCEEEEETT
T ss_pred cCceeECCCCeEEEecCC
Confidence 345667899999998764
No 179
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=91.37 E-value=7 Score=42.94 Aligned_cols=115 Identities=10% Similarity=-0.063 Sum_probs=62.6
Q ss_pred eecCCCcEEEEcCCCCC---CCeEEEEeCCCCCCeecCCCcccc-c---------------c-------ccceEEEccCC
Q 048136 127 GLDVNGNLISTGGFLGG---SRTTRYLWGCPTCDWTEYPTALKD-G---------------R-------WYATQALLADG 180 (559)
Q Consensus 127 ~~l~dG~i~v~GG~~~g---~~~v~~ydp~~t~~W~~~~~~m~~-~---------------R-------~y~s~~~L~dG 180 (559)
...+||+.+++++..++ ...++++|.. +.+...+.. ... . | ...+.+.-+||
T Consensus 43 ~~SpdG~~la~~~~~d~~~~~~~i~~~d~~-~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg 120 (741)
T 2ecf_A 43 KVAPDGSRVTFLRGKDSDRNQLDLWSYDIG-SGQTRLLVD-SKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDA 120 (741)
T ss_dssp EECTTSSEEEEEECCSSCTTEEEEEEEETT-TCCEEEEEC-GGGTC--------------------CCEESCCCEECTTS
T ss_pred eEecCCCEEEEEeccCCCCcccEEEEEECC-CCceeEccc-hhhcccccccccchhhhhhhhhhhccccCcceeEECCCC
Confidence 44579998887765222 2478999988 676654421 110 0 1 12345566799
Q ss_pred cEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEe-cCcEEEeeCCCCeEE
Q 048136 181 SFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFA-NNRSILLDPRANYVL 254 (559)
Q Consensus 181 ~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~G-g~~~e~yDp~t~~W~ 254 (559)
+.++++.. ..+.+| ..++. ......+.... ..-......+||+..+++ +..+.++|..+++..
T Consensus 121 ~~l~~~~~--~~i~~~d~~~~~---~~~~~~l~~~~------~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~ 185 (741)
T 2ecf_A 121 QRLLFPLG--GELYLYDLKQEG---KAAVRQLTHGE------GFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQM 185 (741)
T ss_dssp SEEEEEET--TEEEEEESSSCS---TTSCCBCCCSS------SCEEEEEECTTSSEEEEEETTEEEEEETTTTEEE
T ss_pred CEEEEEeC--CcEEEEECCCCC---cceEEEcccCC------cccccccCCCCCCEEEEEeCCcEEEEecCCCCEE
Confidence 87777664 345556 33220 00111111100 011123456799865554 567889999988766
No 180
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=91.29 E-value=8.4 Score=39.41 Aligned_cols=136 Identities=9% Similarity=0.010 Sum_probs=76.0
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCc
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGS 181 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~ 181 (559)
..+||..+++.+.+.... ........-+||+.+++.+..++...+++||.. +.+...+.. ......+.+.-+||+
T Consensus 205 i~~~d~~tg~~~~l~~~~-~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~-~~~~~~l~~---~~~~~~~~~~spdg~ 279 (415)
T 2hqs_A 205 LVIQTLANGAVRQVASFP-RHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLA-SGQIRQVTD---GRSNNTEPTWFPDSQ 279 (415)
T ss_dssp EEEEETTTCCEEEEECCS-SCEEEEEECTTSSEEEEEECTTSSCEEEEEETT-TCCEEECCC---CSSCEEEEEECTTSS
T ss_pred EEEEECCCCcEEEeecCC-CcccCEEEcCCCCEEEEEEecCCCceEEEEECC-CCCEEeCcC---CCCcccceEECCCCC
Confidence 678999998887654322 223344567899866644333455689999998 776655532 122223445567998
Q ss_pred EEEEcCCCCCceeEE---cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEec-----CcEEEeeCCCCeE
Q 048136 182 FLIFGGRDSFSYEYI---PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN-----NRSILLDPRANYV 253 (559)
Q Consensus 182 VyvvGG~~~~s~E~y---P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg-----~~~e~yDp~t~~W 253 (559)
.++++........+| ...++ ...... .. .........+||+.++++. ..+.+||..+++.
T Consensus 280 ~l~~~s~~~g~~~i~~~d~~~~~----~~~l~~-~~-------~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~ 347 (415)
T 2hqs_A 280 NLAFTSDQAGRPQVYKVNINGGA----PQRITW-EG-------SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV 347 (415)
T ss_dssp EEEEEECTTSSCEEEEEETTSSC----CEECCC-SS-------SEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE
T ss_pred EEEEEECCCCCcEEEEEECCCCC----EEEEec-CC-------CcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE
Confidence 666655433223344 33221 111110 00 0111233457998776654 2578899998876
Q ss_pred E
Q 048136 254 L 254 (559)
Q Consensus 254 ~ 254 (559)
.
T Consensus 348 ~ 348 (415)
T 2hqs_A 348 Q 348 (415)
T ss_dssp E
T ss_pred E
Confidence 5
No 181
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=90.64 E-value=3.8 Score=39.92 Aligned_cols=103 Identities=7% Similarity=-0.046 Sum_probs=59.0
Q ss_pred EeeCCcEEEEec----CcEEEeeCCCCeEEEECCCCCCCCCcccCCCceeecccccccccccccCcEEEEEcCCCCcccc
Q 048136 229 LVPDGNLYIFAN----NRSILLDPRANYVLREYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFY 304 (559)
Q Consensus 229 ~l~~G~iyv~Gg----~~~e~yDp~t~~W~~~~p~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~ 304 (559)
..+||+||+..| +++..+|+++++..+.++ ++. +.+ +.++.+ .+++||+..-.+
T Consensus 28 ~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~-l~~--~~f---geGi~~-----------~g~~lyv~t~~~----- 85 (266)
T 2iwa_A 28 YAENDTLFESTGLYGRSSVRQVALQTGKVENIHK-MDD--SYF---GEGLTL-----------LNEKLYQVVWLK----- 85 (266)
T ss_dssp ECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEE-CCT--TCC---EEEEEE-----------ETTEEEEEETTC-----
T ss_pred EeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEe-cCC--Ccc---eEEEEE-----------eCCEEEEEEecC-----
Confidence 345689999865 578999999999876543 221 212 233322 256888885422
Q ss_pred ccccccccccccCceEEEEecCCCCceeee-cCCCCcccccEEEeeCC-eEEEEcCcCCCCCCccCCCCCCcccEEEeCC
Q 048136 305 FGEVEKRLVPALDDCARMVVTSPDPVWTTE-KMPTPRVMSDGVLLPTG-DVLLINGAELGSAGWKDADKPCFKPLLYKPS 382 (559)
Q Consensus 305 ~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~av~LpdG-~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~ 382 (559)
+.+.+||+.+ .+.. ..+.+...+ ..+.+|| ++|+..|.. .+...||+
T Consensus 86 ------------~~v~viD~~t----~~v~~~i~~g~~~g-~glt~Dg~~l~vs~gs~--------------~l~viD~~ 134 (266)
T 2iwa_A 86 ------------NIGFIYDRRT----LSNIKNFTHQMKDG-WGLATDGKILYGSDGTS--------------ILYEIDPH 134 (266)
T ss_dssp ------------SEEEEEETTT----TEEEEEEECCSSSC-CEEEECSSSEEEECSSS--------------EEEEECTT
T ss_pred ------------CEEEEEECCC----CcEEEEEECCCCCe-EEEEECCCEEEEECCCC--------------eEEEEECC
Confidence 3556777642 2322 222220111 1234565 588776521 67889998
Q ss_pred CC
Q 048136 383 KP 384 (559)
Q Consensus 383 t~ 384 (559)
+.
T Consensus 135 t~ 136 (266)
T 2iwa_A 135 TF 136 (266)
T ss_dssp TC
T ss_pred CC
Confidence 86
No 182
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=90.47 E-value=3.6 Score=40.49 Aligned_cols=99 Identities=10% Similarity=0.004 Sum_probs=55.4
Q ss_pred CcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeee-cCC--CCcccccEEEeeCCeEEEEcCcCCCCCC
Q 048136 289 DAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTE-KMP--TPRVMSDGVLLPTGDVLLINGAELGSAG 365 (559)
Q Consensus 289 ~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~--~~R~~~~av~LpdG~V~vvGG~~~g~~g 365 (559)
+++.++.|+.+ .++..+|+......++.. .+. ...... ...-|++++++.|+.+.
T Consensus 118 ~g~~las~s~D-----------------~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~-v~~~p~~~~l~s~s~D~---- 175 (330)
T 2hes_X 118 DGYYLATCSRD-----------------KSVWIWETDESGEEYECISVLQEHSQDVKH-VIWHPSEALLASSSYDD---- 175 (330)
T ss_dssp TSCEEEEEETT-----------------SCEEEEECCTTCCCCEEEEEECCCSSCEEE-EEECSSSSEEEEEETTS----
T ss_pred CCCEEEEEeCC-----------------CEEEEEeccCCCCCeEEEEEeccCCCceEE-EEECCCCCEEEEEcCCC----
Confidence 67888888765 234556664322334332 222 222222 23458999999988651
Q ss_pred ccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCccceeeeEECCC--CceEEeCCCCC
Q 048136 366 WKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANLLPD--GRVFVGGSNDN 421 (559)
Q Consensus 366 ~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~llpd--G~Vlv~GG~~~ 421 (559)
++.+||..+. .|+.+..+.--...-....+.|| +..++.|+.+.
T Consensus 176 ---------~i~iW~~~~~---~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~ 221 (330)
T 2hes_X 176 ---------TVRIWKDYDD---DWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDS 221 (330)
T ss_dssp ---------CEEEEEEETT---EEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTS
T ss_pred ---------eEEEEECCCC---CeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCC
Confidence 6789998877 77654332211111112446677 77788887653
No 183
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=89.69 E-value=14 Score=35.10 Aligned_cols=81 Identities=10% Similarity=-0.086 Sum_probs=45.8
Q ss_pred eEEEeCCCCCEEeCccC----CCcccccCeecCC-CcEEEEcCCCCCCCeEEEEeCCCCCCeecC-CCcc-ccc-cccce
Q 048136 102 SVFYNVNTLQVTPLKVI----TDTWCSSGGLDVN-GNLISTGGFLGGSRTTRYLWGCPTCDWTEY-PTAL-KDG-RWYAT 173 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~----~~~~c~~~~~l~d-G~i~v~GG~~~g~~~v~~ydp~~t~~W~~~-~~~m-~~~-R~y~s 173 (559)
..+||+.+++++.+... ......+.+...+ |+||+.... ..+.+||+. .+...+ .... ..+ ..-..
T Consensus 48 i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~----~~l~~~d~~--g~~~~~~~~~~~~~~~~~~~~ 121 (314)
T 1pjx_A 48 ILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR----LGLLVVQTD--GTFEEIAKKDSEGRRMQGCND 121 (314)
T ss_dssp EEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT----TEEEEEETT--SCEEECCSBCTTSCBCBCCCE
T ss_pred EEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC----CCEEEEeCC--CCEEEEEeccCCCccccCCcC
Confidence 57889888888765431 1111122344567 899887642 368889986 344433 2100 111 12235
Q ss_pred EEEccCCcEEEEcCC
Q 048136 174 QALLADGSFLIFGGR 188 (559)
Q Consensus 174 ~~~L~dG~VyvvGG~ 188 (559)
.+.-++|++|+....
T Consensus 122 i~~d~~g~l~v~~~~ 136 (314)
T 1pjx_A 122 CAFDYEGNLWITAPA 136 (314)
T ss_dssp EEECTTSCEEEEECB
T ss_pred EEECCCCCEEEEecC
Confidence 666678999987643
No 184
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=89.24 E-value=11 Score=36.11 Aligned_cols=112 Identities=14% Similarity=0.010 Sum_probs=55.4
Q ss_pred cEEEEcCCCCCCCeEEEEeCCCCCCeecCCCcccccc-ccceEEEccCCc-EEEEcCCCCCceeEE-cCCCCCCCcceec
Q 048136 133 NLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGR-WYATQALLADGS-FLIFGGRDSFSYEYI-PAERTENAYSIPF 209 (559)
Q Consensus 133 ~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R-~y~s~~~L~dG~-VyvvGG~~~~s~E~y-P~~~~~~~w~~~~ 209 (559)
.++++++. ...+.+||+. +.+....-. +.... .-..++.-+||+ +|+.+.. ...+.+| ..+.+ -....
T Consensus 2 ~~~v~~~~---~~~v~~~d~~-~~~~~~~~~-~~~~~~~~~~~~~s~dg~~l~v~~~~-~~~v~~~d~~~~~---~~~~~ 72 (337)
T 1pby_B 2 DYILAPAR---PDKLVVIDTE-KMAVDKVIT-IADAGPTPMVPMVAPGGRIAYATVNK-SESLVKIDLVTGE---TLGRI 72 (337)
T ss_dssp EEEEEEET---TTEEEEEETT-TTEEEEEEE-CTTCTTCCCCEEECTTSSEEEEEETT-TTEEEEEETTTCC---EEEEE
T ss_pred cEEEEcCC---CCeEEEEECC-CCcEEEEEE-cCCCCCCccceEEcCCCCEEEEEeCC-CCeEEEEECCCCC---eEeeE
Confidence 35666654 2589999987 654332111 22211 134566667885 5665543 3456666 44431 11111
Q ss_pred cccccc-cccccCCccceEEEeeCCc-EEEEe-------------cCcEEEeeCCCCeEEEEC
Q 048136 210 QFLRDT-YDVLENNLYPFVYLVPDGN-LYIFA-------------NNRSILLDPRANYVLREY 257 (559)
Q Consensus 210 p~l~~~-~d~~~~~~yp~~~~l~~G~-iyv~G-------------g~~~e~yDp~t~~W~~~~ 257 (559)
+..... .. ..-..+...+||+ ||+.. ...+.+||..+++..+.+
T Consensus 73 ~~~~~~~~~----~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~ 131 (337)
T 1pby_B 73 DLSTPEERV----KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAF 131 (337)
T ss_dssp ECCBTTEEE----ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEE
T ss_pred EcCCccccc----ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEE
Confidence 111000 00 0011234567885 55542 267889999988765433
No 185
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=88.99 E-value=18 Score=35.22 Aligned_cols=67 Identities=13% Similarity=0.031 Sum_probs=32.4
Q ss_pred EEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCc-cceeeeEECCCCceEEeCC
Q 048136 345 GVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPR-MYHSVANLLPDGRVFVGGS 418 (559)
Q Consensus 345 av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R-~yhs~a~llpdG~Vlv~GG 418 (559)
.++-++|+|||......... ........+.+|||+.. ....+.. +... ..+-+++...+|++||+..
T Consensus 234 i~~d~~G~l~va~~~~~~~~---~~~~~~~~v~~~d~~G~---~~~~~~~-~~g~~~~~~~~~~~~~g~L~v~~~ 301 (322)
T 2fp8_A 234 IKRNADGHFWVSSSEELDGN---MHGRVDPKGIKFDEFGN---ILEVIPL-PPPFAGEHFEQIQEHDGLLYIGTL 301 (322)
T ss_dssp EEECTTSCEEEEEEEETTSS---TTSCEEEEEEEECTTSC---EEEEEEC-CTTTTTSCCCEEEEETTEEEEECS
T ss_pred eEECCCCCEEEEecCccccc---ccCCCccEEEEECCCCC---EEEEEEC-CCCCccccceEEEEeCCEEEEeec
Confidence 34557899999864310000 00000125789999754 4443321 1100 1112233346899999864
No 186
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=88.65 E-value=12 Score=35.55 Aligned_cols=135 Identities=11% Similarity=-0.093 Sum_probs=74.4
Q ss_pred eEEEeCCCCCEEeCccCC----CcccccCeecCCCcEEEE----cCCC----------CCCCeEEEEeCCCCCCeecCCC
Q 048136 102 SVFYNVNTLQVTPLKVIT----DTWCSSGGLDVNGNLIST----GGFL----------GGSRTTRYLWGCPTCDWTEYPT 163 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~----~~~c~~~~~l~dG~i~v~----GG~~----------~g~~~v~~ydp~~t~~W~~~~~ 163 (559)
...||+.+++.+.+.... ..+....++.++|++|++ |... .+...++.||+. .+...+..
T Consensus 92 i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~--g~~~~~~~ 169 (296)
T 3e5z_A 92 LERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD--GTLSAPIR 169 (296)
T ss_dssp EEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT--SCEEEEEC
T ss_pred EEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC--CCEEEeec
Confidence 678999888887654221 112234566789999997 4310 112478889885 33333221
Q ss_pred ccccccccceEEEccCCcEEEEcCCCCCceeEE-cC-CCCCCCc-ceeccccccccccccCCccc-eEEEeeCCcEEEEe
Q 048136 164 ALKDGRWYATQALLADGSFLIFGGRDSFSYEYI-PA-ERTENAY-SIPFQFLRDTYDVLENNLYP-FVYLVPDGNLYIFA 239 (559)
Q Consensus 164 ~m~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~-~~~~~~w-~~~~p~l~~~~d~~~~~~yp-~~~~l~~G~iyv~G 239 (559)
.+.. -.+.+.-+||+++ +.......+.+| .. .++ . .....+ ... ..+| .+..-++|+||+..
T Consensus 170 ~~~~---~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~---~~~~~~~~-~~~------~~~p~~i~~d~~G~l~v~~ 235 (296)
T 3e5z_A 170 DRVK---PNGLAFLPSGNLL-VSDTGDNATHRYCLNARGE---TEYQGVHF-TVE------PGKTDGLRVDAGGLIWASA 235 (296)
T ss_dssp CCSS---EEEEEECTTSCEE-EEETTTTEEEEEEECSSSC---EEEEEEEE-CCS------SSCCCSEEEBTTSCEEEEE
T ss_pred CCCC---CccEEECCCCCEE-EEeCCCCeEEEEEECCCCc---CcCCCeEe-eCC------CCCCCeEEECCCCCEEEEc
Confidence 1222 2345666789988 444433456666 43 221 1 000011 000 0122 23455799999988
Q ss_pred cCcEEEeeCCCCe
Q 048136 240 NNRSILLDPRANY 252 (559)
Q Consensus 240 g~~~e~yDp~t~~ 252 (559)
+..+.+||+....
T Consensus 236 ~~~v~~~~~~g~~ 248 (296)
T 3e5z_A 236 GDGVHVLTPDGDE 248 (296)
T ss_dssp TTEEEEECTTSCE
T ss_pred CCeEEEECCCCCE
Confidence 7789999998554
No 187
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=88.00 E-value=25 Score=35.80 Aligned_cols=140 Identities=11% Similarity=0.034 Sum_probs=74.5
Q ss_pred eEEEeCC--CCCEEeC-cc-CCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeec-CCCccc-cccccceEE
Q 048136 102 SVFYNVN--TLQVTPL-KV-ITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTE-YPTALK-DGRWYATQA 175 (559)
Q Consensus 102 ~~~yDp~--t~~w~~~-~~-~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~-~~~~m~-~~R~y~s~~ 175 (559)
+.+||.. +++.... .. .+...+......+||+.+++|+. + ..++.||.. +.+... ....+. ....-.+++
T Consensus 127 v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-~--g~v~~~~~~-~~~~~~~~~~~~~~h~~~v~~~~ 202 (450)
T 2vdu_B 127 LLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADK-F--GDVYSIDIN-SIPEEKFTQEPILGHVSMLTDVH 202 (450)
T ss_dssp EEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEET-T--SEEEEEETT-SCCCSSCCCCCSEECSSCEEEEE
T ss_pred EEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeC-C--CcEEEEecC-CcccccccceeeecccCceEEEE
Confidence 6778877 4443322 11 11223334456679999999876 2 468888876 443321 101122 222233455
Q ss_pred EccC---CcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEecC--cEEEeeCC
Q 048136 176 LLAD---GSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFANN--RSILLDPR 249 (559)
Q Consensus 176 ~L~d---G~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg~--~~e~yDp~ 249 (559)
.-+| |+.++.|+.+. .+.+| ..+.+ . ...++.... ..-..+... +|++++.|+. .+.+||..
T Consensus 203 ~sp~~~~~~~l~s~~~d~-~i~vwd~~~~~---~--~~~~~~~h~-----~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~ 270 (450)
T 2vdu_B 203 LIKDSDGHQFIITSDRDE-HIKISHYPQCF---I--VDKWLFGHK-----HFVSSICCG-KDYLLLSAGGDDKIFAWDWK 270 (450)
T ss_dssp EEECTTSCEEEEEEETTS-CEEEEEESCTT---C--EEEECCCCS-----SCEEEEEEC-STTEEEEEESSSEEEEEETT
T ss_pred EcCCCCCCcEEEEEcCCC-cEEEEECCCCc---e--eeeeecCCC-----CceEEEEEC-CCCEEEEEeCCCeEEEEECC
Confidence 5668 88888888763 56677 44321 1 111111110 001112223 8998888864 57899999
Q ss_pred CCeEEEEC
Q 048136 250 ANYVLREY 257 (559)
Q Consensus 250 t~~W~~~~ 257 (559)
+++....+
T Consensus 271 ~~~~~~~~ 278 (450)
T 2vdu_B 271 TGKNLSTF 278 (450)
T ss_dssp TCCEEEEE
T ss_pred CCcEeeee
Confidence 88755433
No 188
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=87.39 E-value=37 Score=37.01 Aligned_cols=79 Identities=9% Similarity=-0.119 Sum_probs=48.9
Q ss_pred eeEEEeCCCCCEEeCccCCCc------------------------ccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCC
Q 048136 101 HSVFYNVNTLQVTPLKVITDT------------------------WCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTC 156 (559)
Q Consensus 101 ~~~~yDp~t~~w~~~~~~~~~------------------------~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~ 156 (559)
...+||..+++.+.+...+.. .....+.-+||+.++++.. ..++++|.. +.
T Consensus 65 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~----~~i~~~d~~-~~ 139 (741)
T 2ecf_A 65 DLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPLG----GELYLYDLK-QE 139 (741)
T ss_dssp EEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEEET----TEEEEEESS-SC
T ss_pred EEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEEeC----CcEEEEECC-CC
Confidence 367889988887665432211 1234566789998888764 589999987 65
Q ss_pred ---CeecCCCccccccccceEEEccCCcEEEEcC
Q 048136 157 ---DWTEYPTALKDGRWYATQALLADGSFLIFGG 187 (559)
Q Consensus 157 ---~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG 187 (559)
.-..+.. ....-...+.-+||+.++.+.
T Consensus 140 ~~~~~~~l~~---~~~~~~~~~~SPDG~~la~~~ 170 (741)
T 2ecf_A 140 GKAAVRQLTH---GEGFATDAKLSPKGGFVSFIR 170 (741)
T ss_dssp STTSCCBCCC---SSSCEEEEEECTTSSEEEEEE
T ss_pred CcceEEEccc---CCcccccccCCCCCCEEEEEe
Confidence 4444322 222233455667998666654
No 189
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=87.26 E-value=11 Score=36.65 Aligned_cols=138 Identities=10% Similarity=-0.049 Sum_probs=72.0
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCc
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGS 181 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~ 181 (559)
...+|++|++...-. +.......+..+.+++||++-.. .+.+.+||+. +-+-.. . .+.+--..+.+.- +++
T Consensus 77 v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~---~~~v~V~D~~-Tl~~~~--t-i~~~~eGwGLt~D-g~~ 147 (268)
T 3nok_A 77 LRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWT---EGLLFTWSGM-PPQRER--T-TRYSGEGWGLCYW-NGK 147 (268)
T ss_dssp EEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESS---SCEEEEEETT-TTEEEE--E-EECSSCCCCEEEE-TTE
T ss_pred EEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEcc---CCEEEEEECC-cCcEEE--E-EeCCCceeEEecC-CCE
Confidence 677899988765433 33322223456668899998543 3689999998 544221 1 2222212233332 456
Q ss_pred EEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEe--cCcEEEeeCCCCeEEEEC
Q 048136 182 FLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFA--NNRSILLDPRANYVLREY 257 (559)
Q Consensus 182 VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~G--g~~~e~yDp~t~~W~~~~ 257 (559)
+|+.-|. ..+.++ |++.+ -....+.... ..+. .+..-....+|+||+-- .+.+.+.||++++....+
T Consensus 148 L~vSdGs--~~l~~iDp~T~~---v~~~I~V~~~---g~~v-~~lNeLe~~dG~lyanvw~s~~I~vIDp~TG~V~~~I 217 (268)
T 3nok_A 148 LVRSDGG--TMLTFHEPDGFA---LVGAVQVKLR---GQPV-ELINELECANGVIYANIWHSSDVLEIDPATGTVVGVI 217 (268)
T ss_dssp EEEECSS--SEEEEECTTTCC---EEEEEECEET---TEEC-CCEEEEEEETTEEEEEETTCSEEEEECTTTCBEEEEE
T ss_pred EEEECCC--CEEEEEcCCCCe---EEEEEEeCCC---Cccc-ccccccEEeCCEEEEEECCCCeEEEEeCCCCcEEEEE
Confidence 7776653 234455 66542 1111111000 0000 01111123499999654 356788999999876443
No 190
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=86.37 E-value=20 Score=33.02 Aligned_cols=107 Identities=13% Similarity=0.023 Sum_probs=50.9
Q ss_pred CCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCcEEEEcCCCCCceeEE-cCC-CCCCCccee
Q 048136 131 NGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGSFLIFGGRDSFSYEYI-PAE-RTENAYSIP 208 (559)
Q Consensus 131 dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~-~~~~~w~~~ 208 (559)
.|+.|..... .....+++||.. +.+...+. .....-.+.+.-+||+.+++++. ..+.+| ..+ ++ ....
T Consensus 9 ~~~~~~~~~~-~~~~~i~~~d~~-~~~~~~~~---~~~~~v~~~~~spdg~~l~~~~~--~~i~~~d~~~~~~---~~~~ 78 (297)
T 2ojh_A 9 HTRLSTGPGG-SMRSSIEIFNIR-TRKMRVVW---QTPELFEAPNWSPDGKYLLLNSE--GLLYRLSLAGDPS---PEKV 78 (297)
T ss_dssp ---------C-CCCEEEEEEETT-TTEEEEEE---EESSCCEEEEECTTSSEEEEEET--TEEEEEESSSCCS---CEEC
T ss_pred eeeEeecCCC-CcceeEEEEeCC-CCceeeec---cCCcceEeeEECCCCCEEEEEcC--CeEEEEeCCCCCC---ceEe
Confidence 4555554332 123689999998 66655432 22333345566679998888763 245566 443 21 1111
Q ss_pred ccccccccccccCCccceEEEeeCCcEEEEec------CcEEEeeCCCCeEE
Q 048136 209 FQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN------NRSILLDPRANYVL 254 (559)
Q Consensus 209 ~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg------~~~e~yDp~t~~W~ 254 (559)
...... .........+||+.++++. ..++.+|..++...
T Consensus 79 ~~~~~~-------~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~ 123 (297)
T 2ojh_A 79 DTGFAT-------ICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPR 123 (297)
T ss_dssp CCTTCC-------CBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCE
T ss_pred cccccc-------ccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceE
Confidence 110000 0111233467898777765 24556666665533
No 191
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=86.36 E-value=31 Score=35.17 Aligned_cols=135 Identities=12% Similarity=0.118 Sum_probs=70.1
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCee--cCCCccc-cccccceEEEcc
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWT--EYPTALK-DGRWYATQALLA 178 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~--~~~~~m~-~~R~y~s~~~L~ 178 (559)
...||+.+++.+.+......-| -++.++|+.+.+... ++...+.+||+. . .|. .+..... ...+-.++++-+
T Consensus 154 I~~id~~~g~~~~~~~~~~~~~--ia~~~~g~~l~~~d~-~~~~~I~~~d~~-~-~~~~~~~g~~~~~~~~~p~~iav~p 228 (409)
T 3hrp_A 154 VRLISVDDNKVTTVHPGFKGGK--PAVTKDKQRVYSIGW-EGTHTVYVYMKA-S-GWAPTRIGQLGSTFSGKIGAVALDE 228 (409)
T ss_dssp EEEEETTTTEEEEEEETCCBCB--CEECTTSSEEEEEBS-STTCEEEEEEGG-G-TTCEEEEEECCTTSCSCCCBCEECT
T ss_pred EEEEECCCCEEEEeeccCCCCc--eeEecCCCcEEEEec-CCCceEEEEEcC-C-CceeEEeeeccchhcCCcEEEEEeC
Confidence 5788998887776543322222 556677765444433 222389999986 3 332 2200001 223334566666
Q ss_pred -CCcEEEEcCCCCCceeEE-cCCCCCCCcceeccc-cccccccccCCccc--eEEEee-CCcEEEEe--cCcEEEeeCCC
Q 048136 179 -DGSFLIFGGRDSFSYEYI-PAERTENAYSIPFQF-LRDTYDVLENNLYP--FVYLVP-DGNLYIFA--NNRSILLDPRA 250 (559)
Q Consensus 179 -dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~-l~~~~d~~~~~~yp--~~~~l~-~G~iyv~G--g~~~e~yDp~t 250 (559)
+|++|+.-. ...+..| +.... ....... ... .....| ..++-+ +|+||+.- .+.+.+||+..
T Consensus 229 ~~g~lyv~d~--~~~I~~~d~~~~~---~~~~~~~~~~g-----~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g 298 (409)
T 3hrp_A 229 TEEWLYFVDS--NKNFGRFNVKTQE---VTLIKQLELSG-----SLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDG 298 (409)
T ss_dssp TSSEEEEECT--TCEEEEEETTTCC---EEEEEECCCCS-----CCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTC
T ss_pred CCCeEEEEEC--CCcEEEEECCCCC---EEEEecccccC-----CCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCC
Confidence 799999543 2235555 54431 1111000 000 001122 455566 68999875 35688898876
Q ss_pred C
Q 048136 251 N 251 (559)
Q Consensus 251 ~ 251 (559)
.
T Consensus 299 ~ 299 (409)
T 3hrp_A 299 E 299 (409)
T ss_dssp C
T ss_pred C
Confidence 5
No 192
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=85.67 E-value=33 Score=34.76 Aligned_cols=112 Identities=9% Similarity=-0.077 Sum_probs=56.1
Q ss_pred CeecCCCc-EEEEcCCCCCCCeEEEEeCCCCC---CeecCC-Ccc-ccccccceEEEcc-CCcEEEEcCCCCCceeEE-c
Q 048136 126 GGLDVNGN-LISTGGFLGGSRTTRYLWGCPTC---DWTEYP-TAL-KDGRWYATQALLA-DGSFLIFGGRDSFSYEYI-P 197 (559)
Q Consensus 126 ~~~l~dG~-i~v~GG~~~g~~~v~~ydp~~t~---~W~~~~-~~m-~~~R~y~s~~~L~-dG~VyvvGG~~~~s~E~y-P 197 (559)
-...+++. ++++|+. + ..+.+||.. +. .+...+ ..+ .+...-.+++..+ ++.+++.|+.++ .+.+| .
T Consensus 187 l~~~~~~~~~l~s~~~-d--g~i~vwd~~-~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg-~i~i~d~ 261 (430)
T 2xyi_A 187 LSWNPNLNGYLLSASD-D--HTICLWDIN-ATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQ-KLMIWDT 261 (430)
T ss_dssp EEECTTSTTEEEEECT-T--SCEEEEETT-SCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTS-EEEEEET
T ss_pred EEeCCCCCCeEEEEeC-C--CeEEEEeCC-CCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCC-eEEEEEC
Confidence 34556777 8888876 3 478899987 42 121110 001 1112223344444 678888887653 46667 4
Q ss_pred CCCCCCCcceeccccccccccccCCccceEEEeeCCc-EEEEec--CcEEEeeCCC
Q 048136 198 AERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGN-LYIFAN--NRSILLDPRA 250 (559)
Q Consensus 198 ~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~-iyv~Gg--~~~e~yDp~t 250 (559)
.... .......+ .... ..-.++...++++ +++.|+ ..+.+||.++
T Consensus 262 ~~~~--~~~~~~~~-~~~~-----~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~ 309 (430)
T 2xyi_A 262 RNNN--TSKPSHTV-DAHT-----AEVNCLSFNPYSEFILATGSADKTVALWDLRN 309 (430)
T ss_dssp TCSC--SSSCSEEE-ECCS-----SCEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred CCCC--CCcceeEe-ecCC-----CCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCC
Confidence 3321 01111111 1100 0011223345665 788876 4578899876
No 193
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=85.03 E-value=26 Score=33.02 Aligned_cols=88 Identities=15% Similarity=0.076 Sum_probs=47.4
Q ss_pred eeEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCC
Q 048136 101 HSVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADG 180 (559)
Q Consensus 101 ~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG 180 (559)
...+||..+++.......+...+ .....++++++.|+.. ..+..++.. ....... ....+...........+|
T Consensus 90 ~v~iw~~~~~~~~~~~~~h~~~~--~~~~~~~~~l~s~~~~---~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~ 162 (318)
T 4ggc_A 90 EVQLWDVQQQKRLRNMTSHSARV--GSLSWNSYILSSGSRS---GHIHHHDVR-VAEHHVA-TLSGHSQEVCGLRWAPDG 162 (318)
T ss_dssp EEEEEETTTTEEEEEEECCSSCE--EEEEEETTEEEEEETT---SEEEEEETT-SSSCEEE-EEECCSSCEEEEEECTTS
T ss_pred cEEEeecCCceeEEEecCccceE--EEeecCCCEEEEEecC---CceEeeecC-CCceeEE-EEcCccCceEEEEEcCCC
Confidence 36788888776543322233222 2234578888888762 356666655 3322111 101122223344556688
Q ss_pred cEEEEcCCCCCceeEE
Q 048136 181 SFLIFGGRDSFSYEYI 196 (559)
Q Consensus 181 ~VyvvGG~~~~s~E~y 196 (559)
+.++.|+.++ .+.+|
T Consensus 163 ~~l~s~~~d~-~i~iw 177 (318)
T 4ggc_A 163 RHLASGGNDN-LVNVW 177 (318)
T ss_dssp SEEEEEETTS-CEEEE
T ss_pred CEEEEEecCc-ceeEE
Confidence 8888888764 46667
No 194
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=84.67 E-value=14 Score=35.45 Aligned_cols=143 Identities=14% Similarity=0.113 Sum_probs=74.4
Q ss_pred eEEEeCCCCCEEeCccC----CCcccccCeecCCCcEEEEc-CCC-------CCCCeEEEEeCCCCCCeecCCCcccccc
Q 048136 102 SVFYNVNTLQVTPLKVI----TDTWCSSGGLDVNGNLISTG-GFL-------GGSRTTRYLWGCPTCDWTEYPTALKDGR 169 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~----~~~~c~~~~~l~dG~i~v~G-G~~-------~g~~~v~~ydp~~t~~W~~~~~~m~~~R 169 (559)
...||+++++++.+... ...+....++.++|++|+.- +.. .....++++|+. . +...+...+..
T Consensus 75 l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g-~~~~~~~~~~~-- 150 (297)
T 3g4e_A 75 FCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-H-HVKKYFDQVDI-- 150 (297)
T ss_dssp EEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-S-CEEEEEEEESB--
T ss_pred EEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-C-CEEEEeecccc--
Confidence 57899999888776532 12234455677899988853 110 112467888875 3 33322211222
Q ss_pred ccceEEEccCCc-EEEEcCCCCCceeEE-c--CCCCCCCcceeccccccccccccCCccceE-EEeeCCcEEEEe--cCc
Q 048136 170 WYATQALLADGS-FLIFGGRDSFSYEYI-P--AERTENAYSIPFQFLRDTYDVLENNLYPFV-YLVPDGNLYIFA--NNR 242 (559)
Q Consensus 170 ~y~s~~~L~dG~-VyvvGG~~~~s~E~y-P--~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~-~~l~~G~iyv~G--g~~ 242 (559)
-.+.+.-+||+ +|++.-.. ..+.+| . .++. ......+.. .. ....+|.. .+-.+|+||+.. +..
T Consensus 151 -pngi~~spdg~~lyv~~~~~-~~i~~~~~d~~~G~---~~~~~~~~~-~~---~~~~~p~g~~~d~~G~lwva~~~~~~ 221 (297)
T 3g4e_A 151 -SNGLDWSLDHKIFYYIDSLS-YSVDAFDYDLQTGQ---ISNRRSVYK-LE---KEEQIPDGMCIDAEGKLWVACYNGGR 221 (297)
T ss_dssp -EEEEEECTTSCEEEEEEGGG-TEEEEEEECTTTCC---EEEEEEEEE-CC---GGGCEEEEEEEBTTSCEEEEEETTTE
T ss_pred -ccceEEcCCCCEEEEecCCC-CcEEEEeccCCCCc---ccCcEEEEE-CC---CCCCCCCeeEECCCCCEEEEEcCCCE
Confidence 23455666886 66654322 335555 2 3321 100000100 00 00123333 334689999875 456
Q ss_pred EEEeeCCCCeEEEEC
Q 048136 243 SILLDPRANYVLREY 257 (559)
Q Consensus 243 ~e~yDp~t~~W~~~~ 257 (559)
+.+|||.+++....+
T Consensus 222 v~~~d~~tG~~~~~i 236 (297)
T 3g4e_A 222 VIRLDPVTGKRLQTV 236 (297)
T ss_dssp EEEECTTTCCEEEEE
T ss_pred EEEEcCCCceEEEEE
Confidence 899999987765433
No 195
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=84.49 E-value=51 Score=35.96 Aligned_cols=95 Identities=13% Similarity=-0.027 Sum_probs=54.2
Q ss_pred eeEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCC----------CCeEEEEeCCCCCCee--cCCCccccc
Q 048136 101 HSVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGG----------SRTTRYLWGCPTCDWT--EYPTALKDG 168 (559)
Q Consensus 101 ~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g----------~~~v~~ydp~~t~~W~--~~~~~m~~~ 168 (559)
...++|..+++...............+..+||+.++.+..... ...+++++.. +..-. .+-..-...
T Consensus 148 ~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~-t~~~~~~lv~~~~~~~ 226 (695)
T 2bkl_A 148 VLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLG-TEPSKDTVVHERTGDP 226 (695)
T ss_dssp EEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETT-SCGGGCEEEECCCCCT
T ss_pred EEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECC-CCchhceEEEecCCCC
Confidence 3688999998875111122221145667789998887765321 2458888877 54421 111100123
Q ss_pred cccceEEEccCCcEEEEcCCCC-CceeEE
Q 048136 169 RWYATQALLADGSFLIFGGRDS-FSYEYI 196 (559)
Q Consensus 169 R~y~s~~~L~dG~VyvvGG~~~-~s~E~y 196 (559)
.+..+...-+||+.+++...+. .+.++|
T Consensus 227 ~~~~~~~~SpDG~~l~~~~~~~~~~~~l~ 255 (695)
T 2bkl_A 227 TTFLQSDLSRDGKYLFVYILRGWSENDVY 255 (695)
T ss_dssp TCEEEEEECTTSCCEEEEEEETTTEEEEE
T ss_pred EEEEEEEECCCCCEEEEEEeCCCCceEEE
Confidence 4555666778998777765444 455666
No 196
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=83.82 E-value=36 Score=34.55 Aligned_cols=90 Identities=8% Similarity=-0.199 Sum_probs=50.1
Q ss_pred eEEEeCCCCCEEeC-ccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCC------cc---------
Q 048136 102 SVFYNVNTLQVTPL-KVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPT------AL--------- 165 (559)
Q Consensus 102 ~~~yDp~t~~w~~~-~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~------~m--------- 165 (559)
..+||..+.+.... ...+........+. ||+++++|+. + ..+.+||.. +.+....-. .+
T Consensus 222 i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~-d--~~v~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (450)
T 2vdu_B 222 IKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGG-D--DKIFAWDWK-TGKNLSTFDYNSLIKPYLNDQHLAPP 296 (450)
T ss_dssp EEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEES-S--SEEEEEETT-TCCEEEEEECHHHHGGGCCTTSBC--
T ss_pred EEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeC-C--CeEEEEECC-CCcEeeeecchhhhhhhhhhcccccc
Confidence 56788776654322 11222222223444 9999999986 3 588999987 554322100 00
Q ss_pred --------ccccccceEEEccCCcEEEEcCCCCCceeEE
Q 048136 166 --------KDGRWYATQALLADGSFLIFGGRDSFSYEYI 196 (559)
Q Consensus 166 --------~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y 196 (559)
.....-...+..+||+.+++++.....+.+|
T Consensus 297 ~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw 335 (450)
T 2vdu_B 297 RFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIIL 335 (450)
T ss_dssp --------CBCCCEEEEEECSSSSEEEEEETTCSEEEEE
T ss_pred cccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEE
Confidence 1112223455667888888887544567777
No 197
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=83.60 E-value=52 Score=35.37 Aligned_cols=109 Identities=14% Similarity=0.021 Sum_probs=59.3
Q ss_pred CCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCcEEEEcCCCCCceeEE-cCCCCCCCccee
Q 048136 130 VNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGSFLIFGGRDSFSYEYI-PAERTENAYSIP 208 (559)
Q Consensus 130 ~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~ 208 (559)
+++.+||+... ..++.++|+. +.+-.. . +..+..-+.++.-+||+.+.+++.+ ..+.+| ....+ ....
T Consensus 165 ~~~~~~V~~~~---~~~V~viD~~-t~~v~~--~-i~~g~~p~~v~~SpDGr~lyv~~~d-g~V~viD~~~~t---~~~v 233 (567)
T 1qks_A 165 LENLFSVTLRD---AGQIALIDGS-TYEIKT--V-LDTGYAVHISRLSASGRYLFVIGRD-GKVNMIDLWMKE---PTTV 233 (567)
T ss_dssp GGGEEEEEETT---TTEEEEEETT-TCCEEE--E-EECSSCEEEEEECTTSCEEEEEETT-SEEEEEETTSSS---CCEE
T ss_pred CCceEEEEeCC---CCeEEEEECC-CCeEEE--E-EeCCCCccceEECCCCCEEEEEcCC-CeEEEEECCCCC---CcEe
Confidence 34567777543 3689999998 665332 1 3344333566677788754455543 345666 43111 1112
Q ss_pred ccccccccccccCCccceEE-Ee----eCCcEEEEec---CcEEEeeCCCCeEEEEC
Q 048136 209 FQFLRDTYDVLENNLYPFVY-LV----PDGNLYIFAN---NRSILLDPRANYVLREY 257 (559)
Q Consensus 209 ~p~l~~~~d~~~~~~yp~~~-~l----~~G~iyv~Gg---~~~e~yDp~t~~W~~~~ 257 (559)
..+.. ...|... +. +||+..++++ .++.++|..+.+-.+.+
T Consensus 234 ~~i~~--------G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i 282 (567)
T 1qks_A 234 AEIKI--------GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQ 282 (567)
T ss_dssp EEEEC--------CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEE
T ss_pred EEEec--------CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEE
Confidence 21111 1234333 34 4887655554 57789999888765444
No 198
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=81.62 E-value=8.7 Score=39.45 Aligned_cols=73 Identities=16% Similarity=0.185 Sum_probs=37.0
Q ss_pred cccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCccceeeeEECCCCceEEeCCCCC
Q 048136 342 MSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANLLPDGRVFVGGSNDN 421 (559)
Q Consensus 342 ~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~llpdG~Vlv~GG~~~ 421 (559)
.|..++.-+|+||..|-...|.-|.... .....+..-+.-.+ .....++ .-.+|+ ++|..||+||.-|.+..
T Consensus 235 ~ht~~l~~~G~v~~wG~n~~GqlG~g~~-~~~~~p~~v~~~~~--~~v~~i~----~G~~hs-~alt~~G~v~~wG~n~~ 306 (406)
T 4d9s_A 235 RHTISVSYSGALYTYGWSKYGQLGHGDL-EDHLIPHKLEALSN--SFISQIS----GGWRHT-MALTSDGKLYGWGWNKF 306 (406)
T ss_dssp SEEEEEETTCCEEEEECCTTSTTCSSSC-CCEEEEEECGGGTT--SCEEEEE----ECSSEE-EEEETTSCEEEEECCTT
T ss_pred CcEEEEcCCCCEEEeeCCCCCCCCCCCC-cCccccEEecccCC--CCEEEEE----ecCCEE-EEEcCCCeEEEeeCCCC
Confidence 3445667799999998554433221110 01111111110000 1233322 123574 55678999999998765
Q ss_pred C
Q 048136 422 D 422 (559)
Q Consensus 422 ~ 422 (559)
+
T Consensus 307 G 307 (406)
T 4d9s_A 307 G 307 (406)
T ss_dssp S
T ss_pred C
Confidence 4
No 199
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=80.94 E-value=44 Score=32.69 Aligned_cols=54 Identities=15% Similarity=-0.090 Sum_probs=36.4
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCee
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWT 159 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~ 159 (559)
...+|+.+++.+++...+.........-+||+.+++.... ..++++|.. +.+-.
T Consensus 62 l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~---~~l~~~d~~-~g~~~ 115 (388)
T 3pe7_A 62 YYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG---RNLMRVDLA-TLEEN 115 (388)
T ss_dssp EEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT---TEEEEEETT-TCCEE
T ss_pred EEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC---CeEEEEECC-CCcce
Confidence 5678999988888765443322234577899877776542 578899988 66543
No 200
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=80.88 E-value=22 Score=35.65 Aligned_cols=92 Identities=10% Similarity=0.040 Sum_probs=52.4
Q ss_pred cCceEEEEec---CCCCceeee-c-CCC--------C-cccccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeC
Q 048136 316 LDDCARMVVT---SPDPVWTTE-K-MPT--------P-RVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKP 381 (559)
Q Consensus 316 ~~s~~~~d~~---~~~~~W~~~-~-M~~--------~-R~~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP 381 (559)
.+.+.+||+. .....|... + ... . ...-++++=++|.+||++-... ..+.++||
T Consensus 99 ~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~------------~~I~rV~p 166 (334)
T 2p9w_A 99 ASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGM------------PAIARVSA 166 (334)
T ss_dssp CCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESS------------CEEEEECT
T ss_pred CCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCC------------CeEEEEeC
Confidence 3567889987 434566653 2 111 1 1234567778999999864320 15778888
Q ss_pred CCCCCCeEEecCCCCCCccceeeeEECCCCceEEeCCC
Q 048136 382 SKPPGSRFTELAPSDIPRMYHSVANLLPDGRVFVGGSN 419 (559)
Q Consensus 382 ~t~~g~~Wt~~~~~~~~R~yhs~a~llpdG~Vlv~GG~ 419 (559)
+...-..|-.-.+-...|..-.-.+..|||+.|++-..
T Consensus 167 dG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~ 204 (334)
T 2p9w_A 167 DGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG 204 (334)
T ss_dssp TSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS
T ss_pred CCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC
Confidence 76533346443332333444444566799977665443
No 201
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=80.73 E-value=11 Score=38.28 Aligned_cols=73 Identities=19% Similarity=0.244 Sum_probs=38.1
Q ss_pred cccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCccceeeeEECCCCceEEeCCCCC
Q 048136 342 MSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANLLPDGRVFVGGSNDN 421 (559)
Q Consensus 342 ~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~llpdG~Vlv~GG~~~ 421 (559)
.|..++.-||+||..|-...|.-|.... .....+..-.. ..+.+...++ .-.+|+ ++|..||+||.-|-+..
T Consensus 275 ~hs~alt~~G~v~~wG~n~~GqLG~g~~-~~~~~P~~v~~--l~~~~v~~ia----~G~~h~-~al~~~G~v~~wG~n~~ 346 (389)
T 3kci_A 275 QFSVALTKSGAVYTWGKGDYHRLGHGSD-DHVRRPRQVQG--LQGKKVIAIA----TGSLHC-VCCTEDGEVYTWGDNDE 346 (389)
T ss_dssp TEEEEEETTSCEEEEECCGGGTTCSSSC-CCEEEEEECGG--GTTCCEEEEE----ECSSEE-EEEETTCCEEEEECCTT
T ss_pred CEEEEEeCCCeEEEEeCCCCCCCCCCCC-ccccCCeEecc--CCCCCEEEEE----eccCeE-EEECCCCCEEEeeCCCC
Confidence 3445667799999998654433221111 11111111110 0111343332 234675 55678999999998865
Q ss_pred C
Q 048136 422 D 422 (559)
Q Consensus 422 ~ 422 (559)
+
T Consensus 347 G 347 (389)
T 3kci_A 347 G 347 (389)
T ss_dssp S
T ss_pred C
Confidence 4
No 202
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=79.60 E-value=38 Score=38.61 Aligned_cols=106 Identities=8% Similarity=0.034 Sum_probs=59.6
Q ss_pred eecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCcEEEEcCCCCCceeEE-cCCCCCCCc
Q 048136 127 GLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGSFLIFGGRDSFSYEYI-PAERTENAY 205 (559)
Q Consensus 127 ~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w 205 (559)
++-+||+++++|+. + ..+++||.. +.+-... +.....-.+++..+ |+.++.|+.+ .++.+| ..+.+
T Consensus 24 afspdg~~lAsgs~-D--g~I~lw~~~-~~~~~~~---~~~~~~V~~l~fsp-g~~L~S~s~D-~~v~lWd~~~~~---- 90 (902)
T 2oaj_A 24 AFDFTQNLLAIATV-T--GEVHIYGQQ-QVEVVIK---LEDRSAIKEMRFVK-GIYLVVINAK-DTVYVLSLYSQK---- 90 (902)
T ss_dssp EEETTTTEEEEEET-T--SEEEEECST-TCEEEEE---CSSCCCEEEEEEET-TTEEEEEETT-CEEEEEETTTCS----
T ss_pred EECCCCCEEEEEeC-C--CEEEEEeCC-CcEEEEE---cCCCCCEEEEEEcC-CCEEEEEECc-CeEEEEECCCCc----
Confidence 45578999999987 3 589999976 4432211 22222233444455 7866666654 467777 44321
Q ss_pred ceeccccccccccccCCccceEEEeeCCcEEEEec--CcEEEeeCCCCeE
Q 048136 206 SIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN--NRSILLDPRANYV 253 (559)
Q Consensus 206 ~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg--~~~e~yDp~t~~W 253 (559)
....+... ..--.+...++|+.+++|. ..+.+||..+++-
T Consensus 91 -~~~~~~~~-------~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~ 132 (902)
T 2oaj_A 91 -VLTTVFVP-------GKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQL 132 (902)
T ss_dssp -EEEEEECS-------SCEEEEECCTTCSEEEEEETTSCEEEEETTTTEE
T ss_pred -EEEEEcCC-------CCEEEEEECCCCCEEEEEcCCCcEEEEECCCCcc
Confidence 11111100 0011223346888888885 4688999988764
No 203
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=79.27 E-value=82 Score=34.82 Aligned_cols=136 Identities=10% Similarity=0.005 Sum_probs=75.4
Q ss_pred eEEEeCCCCCEEeCccCC-----CcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCC--ccccccccceE
Q 048136 102 SVFYNVNTLQVTPLKVIT-----DTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPT--ALKDGRWYATQ 174 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~-----~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~--~m~~~R~y~s~ 174 (559)
..+||+.+++|+...... ...........+|+|++..-. ..+.+||+. +.++..... .++... -.+.
T Consensus 471 l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~----~Gl~~~~~~-~~~~~~~~~~~~l~~~~-i~~i 544 (781)
T 3v9f_A 471 VFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFG----GGVGIYTPD-MQLVRKFNQYEGFCSNT-INQI 544 (781)
T ss_dssp EEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESS----SCEEEECTT-CCEEEEECTTTTCSCSC-EEEE
T ss_pred eEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcC----CCEEEEeCC-CCeEEEccCCCCCCCCe-eEEE
Confidence 467899888887654221 122223344567888875321 237789998 777766531 132222 1234
Q ss_pred EEccCCcEEEEcCCCCCce-eEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEecCcEEEeeCCCCe
Q 048136 175 ALLADGSFLIFGGRDSFSY-EYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFANNRSILLDPRANY 252 (559)
Q Consensus 175 ~~L~dG~VyvvGG~~~~s~-E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg~~~e~yDp~t~~ 252 (559)
..-.+|+|++... . .. -+| |++++ .... .. .+..+.+.......-.+|+|++.+.+...+|||++++
T Consensus 545 ~~d~~g~lWi~T~-~--Glv~~~d~~~~~---~~~~-~~----~~gl~~~~i~~i~~d~~g~lW~~t~~Gl~~~~~~~~~ 613 (781)
T 3v9f_A 545 YRSSKGQMWLATG-E--GLVCFPSARNFD---YQVF-QR----KEGLPNTHIRAISEDKNGNIWASTNTGISCYITSKKC 613 (781)
T ss_dssp EECTTSCEEEEET-T--EEEEESCTTTCC---CEEE-CG----GGTCSCCCCCEEEECSSSCEEEECSSCEEEEETTTTE
T ss_pred EECCCCCEEEEEC-C--CceEEECCCCCc---EEEc-cc----cCCCCCceEEEEEECCCCCEEEEcCCceEEEECCCCc
Confidence 4445788887543 1 23 445 55432 2111 10 0111112222333445899999888889999999998
Q ss_pred EE
Q 048136 253 VL 254 (559)
Q Consensus 253 W~ 254 (559)
+.
T Consensus 614 ~~ 615 (781)
T 3v9f_A 614 FY 615 (781)
T ss_dssp EE
T ss_pred eE
Confidence 76
No 204
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=78.07 E-value=49 Score=31.54 Aligned_cols=59 Identities=12% Similarity=0.026 Sum_probs=34.2
Q ss_pred CCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCcEEEEcCCCCCceeEE-cCCC
Q 048136 131 NGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGSFLIFGGRDSFSYEYI-PAER 200 (559)
Q Consensus 131 dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~ 200 (559)
+++||++.-. ...+.+||+. +.+..... + +..-.+.+..+||++++..+ ..+.+| +.++
T Consensus 24 ~~~l~~~d~~---~~~i~~~d~~-~~~~~~~~--~--~~~~~~i~~~~dG~l~v~~~---~~l~~~d~~~g 83 (297)
T 3g4e_A 24 SNSLLFVDIP---AKKVCRWDSF-TKQVQRVT--M--DAPVSSVALRQSGGYVATIG---TKFCALNWKEQ 83 (297)
T ss_dssp TTEEEEEETT---TTEEEEEETT-TCCEEEEE--C--SSCEEEEEEBTTSSEEEEET---TEEEEEETTTT
T ss_pred CCEEEEEECC---CCEEEEEECC-CCcEEEEe--C--CCceEEEEECCCCCEEEEEC---CeEEEEECCCC
Confidence 5778887543 3578999998 66543221 1 11223455667899777542 235556 5543
No 205
>3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A*
Probab=77.68 E-value=12 Score=37.83 Aligned_cols=88 Identities=14% Similarity=0.150 Sum_probs=45.7
Q ss_pred EEEEecCCCCceeee-c-----CCCCc-----c-cccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCC
Q 048136 320 ARMVVTSPDPVWTTE-K-----MPTPR-----V-MSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGS 387 (559)
Q Consensus 320 ~~~d~~~~~~~W~~~-~-----M~~~R-----~-~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~ 387 (559)
..+--.+...+|+.. . ++.++ . +. .+.+.+|+|++.-....+.. .. .+....--.+| |+
T Consensus 117 ~v~~S~D~G~TW~~~~~i~~~~~~~~~~g~~~v~eP-~~~~~~G~l~~~~~~~~~~~-----~~--~~~~~~~~S~D-G~ 187 (355)
T 3a72_A 117 VLYASQDDGMTWDFVSHIAAGGEARPNNGLTPVWEP-FLLANKGKLICYYSDQRDNA-----TY--GQTMVHQVTND-LK 187 (355)
T ss_dssp EEEEESSTTSCCEEEEEEEEESCSSCCTTCCCEEEE-EEEEETTEEEEEEEECCCTT-----TC--SCEEEEEEESS-SS
T ss_pred EEEEECCCCccCccCccccccCccccccCCCccccc-eEEccCCeEEEEECCCCCCC-----CC--CcEEEEEECCC-CC
Confidence 344445667899974 3 22221 1 22 45778999988753221100 00 11122222345 67
Q ss_pred eEEecCCC-----CCCccceeeeEECCCCceEEe
Q 048136 388 RFTELAPS-----DIPRMYHSVANLLPDGRVFVG 416 (559)
Q Consensus 388 ~Wt~~~~~-----~~~R~yhs~a~llpdG~Vlv~ 416 (559)
+|+..... ...|.....++-|+||+++++
T Consensus 188 TWs~~~~~~~~~~~~~rpg~p~v~~l~dG~l~l~ 221 (355)
T 3a72_A 188 NWGPVVEDVTYPTYTDRPGMPVVTKLPNGQYFYV 221 (355)
T ss_dssp SCCCCEEEECCSSTTCEEEEEEEEECTTSCEEEE
T ss_pred CCCCCeeccccCccCCCCCceEEEECCCCCEEEE
Confidence 99764322 123433445678999998765
No 206
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=77.28 E-value=70 Score=32.92 Aligned_cols=102 Identities=13% Similarity=0.108 Sum_probs=56.2
Q ss_pred CcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCcEEEEcCCCC--Cc-eeEE-cCCCCCCCcce
Q 048136 132 GNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGSFLIFGGRDS--FS-YEYI-PAERTENAYSI 207 (559)
Q Consensus 132 G~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~--~s-~E~y-P~~~~~~~w~~ 207 (559)
|+||++=- . ..++++|+. +.+.+.+...+..+ .+.+.-++|++||.--... .. +-.+ +... +..
T Consensus 153 g~Lyv~D~---~-~~I~~id~~-~g~v~~~~~~~~~P---~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~----~~~ 220 (433)
T 4hw6_A 153 DDLYWVGQ---R-DAFRHVDFV-NQYVDIKTTNIGQC---ADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASG----FTE 220 (433)
T ss_dssp CEEEEECB---T-SCEEEEETT-TTEEEEECCCCSCE---EEEEECTTCCEEEEECCSCTTSEEEEEECGGGT----TCC
T ss_pred CEEEEEeC---C-CCEEEEECC-CCEEEEeecCCCCc---cEEEECCCCCEEEEcCCCCcccceEEEEECCCC----eec
Confidence 88999832 1 689999997 67766654323323 2456667899999853211 11 2222 3221 210
Q ss_pred eccccccccccccCCccce-EEEee-CCcEEEEe--cCcEEEeeCCCCeE
Q 048136 208 PFQFLRDTYDVLENNLYPF-VYLVP-DGNLYIFA--NNRSILLDPRANYV 253 (559)
Q Consensus 208 ~~p~l~~~~d~~~~~~yp~-~~~l~-~G~iyv~G--g~~~e~yDp~t~~W 253 (559)
...+ .. ...|. +.+-+ +|+||+.- +..+.+||+.+++.
T Consensus 221 ~~~~-~~-------~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 221 RLSL-CN-------ARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTL 262 (433)
T ss_dssp EEEE-EE-------CSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCE
T ss_pred cccc-cc-------cCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeE
Confidence 0000 00 01222 34455 89999863 35688999987765
No 207
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=75.97 E-value=57 Score=31.27 Aligned_cols=107 Identities=10% Similarity=-0.000 Sum_probs=54.8
Q ss_pred CeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCcEEEEcCCC-CCceeEE-cCCCCCC
Q 048136 126 GGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGSFLIFGGRD-SFSYEYI-PAERTEN 203 (559)
Q Consensus 126 ~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~-~~s~E~y-P~~~~~~ 203 (559)
.++..+|+||++--. ...+.+||+. .. ...... .+..-.+.+..+||++||..... ...+-.+ +.+++
T Consensus 37 ia~~~~g~lyv~d~~---~~~I~~~d~~-g~-~~~~~~---~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~-- 106 (306)
T 2p4o_A 37 LASAPDGTIFVTNHE---VGEIVSITPD-GN-QQIHAT---VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGT-- 106 (306)
T ss_dssp EEECTTSCEEEEETT---TTEEEEECTT-CC-EEEEEE---CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSC--
T ss_pred EEECCCCCEEEEeCC---CCeEEEECCC-Cc-eEEEEe---CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCe--
Confidence 344578999998422 3578999997 43 322211 12223455666789999986432 1123334 44432
Q ss_pred CcceeccccccccccccCCccce-EEEeeCCcEEEEe--cCcEEEeeCCCC
Q 048136 204 AYSIPFQFLRDTYDVLENNLYPF-VYLVPDGNLYIFA--NNRSILLDPRAN 251 (559)
Q Consensus 204 ~w~~~~p~l~~~~d~~~~~~yp~-~~~l~~G~iyv~G--g~~~e~yDp~t~ 251 (559)
......... ..++. .+...++++|+.- ...+.++|+.++
T Consensus 107 -~~~~~~~~~--------~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~ 148 (306)
T 2p4o_A 107 -VETLLTLPD--------AIFLNGITPLSDTQYLTADSYRGAIWLIDVVQP 148 (306)
T ss_dssp -EEEEEECTT--------CSCEEEEEESSSSEEEEEETTTTEEEEEETTTT
T ss_pred -EEEEEeCCC--------ccccCcccccCCCcEEEEECCCCeEEEEeCCCC
Confidence 211111100 01111 2223466677764 346778898765
No 208
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=75.03 E-value=34 Score=32.82 Aligned_cols=137 Identities=12% Similarity=-0.035 Sum_probs=72.3
Q ss_pred eEEEeCCCCCEEeCccCC----CcccccCeecCCCcEEEE----cCCC----------CCCCeEEEEeCCCCCCeecCCC
Q 048136 102 SVFYNVNTLQVTPLKVIT----DTWCSSGGLDVNGNLIST----GGFL----------GGSRTTRYLWGCPTCDWTEYPT 163 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~----~~~c~~~~~l~dG~i~v~----GG~~----------~g~~~v~~ydp~~t~~W~~~~~ 163 (559)
..+||+. ++.+.+.... .......++..||+||++ |-.. .+...+.+||+. +.+++.+.
T Consensus 109 v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~-~g~~~~~~- 185 (305)
T 3dr2_A 109 ITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPD-GSPLQRMA- 185 (305)
T ss_dssp EEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSS-SCCCEEEE-
T ss_pred EEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCC-CCcEEEEe-
Confidence 5677875 6666553211 112234566779999996 4321 012468999997 67766543
Q ss_pred ccccccccceEEEccCCc-EEEEcCCC----CCceeEE-cCCCCCCCcceeccccccccccccCCccc-eEEEeeCCcEE
Q 048136 164 ALKDGRWYATQALLADGS-FLIFGGRD----SFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYP-FVYLVPDGNLY 236 (559)
Q Consensus 164 ~m~~~R~y~s~~~L~dG~-VyvvGG~~----~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp-~~~~l~~G~iy 236 (559)
.+..+ .+.+.-+||+ +|+..-.. ...+.+| ...+ .......+. .. . ...| ...+-.+|+||
T Consensus 186 ~~~~p---~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~---~l~~~~~~~-~~----~-~~~pdgi~~d~~G~lw 253 (305)
T 3dr2_A 186 DLDHP---NGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDG---ALHDRRHFA-SV----P-DGLPDGFCVDRGGWLW 253 (305)
T ss_dssp EESSE---EEEEECTTSSEEEEEECCC---CCCEEEEEEEETT---EEEEEEEEE-CC----S-SSCCCSEEECTTSCEE
T ss_pred cCCCC---cceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCC---CccCCeEEE-EC----C-CCCCCeEEECCCCCEE
Confidence 23222 3456667887 66654321 1345555 3221 000000000 00 0 0112 23445689999
Q ss_pred EEecCcEEEeeCCCCeE
Q 048136 237 IFANNRSILLDPRANYV 253 (559)
Q Consensus 237 v~Gg~~~e~yDp~t~~W 253 (559)
+..+..+.+||+.....
T Consensus 254 v~~~~gv~~~~~~g~~~ 270 (305)
T 3dr2_A 254 SSSGTGVCVFDSDGQLL 270 (305)
T ss_dssp ECCSSEEEEECTTSCEE
T ss_pred EecCCcEEEECCCCCEE
Confidence 88777789999975543
No 209
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=74.61 E-value=78 Score=33.94 Aligned_cols=88 Identities=13% Similarity=0.032 Sum_probs=47.7
Q ss_pred eEEEeCCCCCEEe-CccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEc---
Q 048136 102 SVFYNVNTLQVTP-LKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALL--- 177 (559)
Q Consensus 102 ~~~yDp~t~~w~~-~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L--- 177 (559)
+.++|+.+++... +..-... ++.++.+||+.+.+++. + ..+.+||.. ..+-..+.. +..+..-...+.-
T Consensus 179 V~viD~~t~~v~~~i~~g~~p--~~v~~SpDGr~lyv~~~-d--g~V~viD~~-~~t~~~v~~-i~~G~~P~~ia~s~~~ 251 (567)
T 1qks_A 179 IALIDGSTYEIKTVLDTGYAV--HISRLSASGRYLFVIGR-D--GKVNMIDLW-MKEPTTVAE-IKIGSEARSIETSKME 251 (567)
T ss_dssp EEEEETTTCCEEEEEECSSCE--EEEEECTTSCEEEEEET-T--SEEEEEETT-SSSCCEEEE-EECCSEEEEEEECCST
T ss_pred EEEEECCCCeEEEEEeCCCCc--cceEECCCCCEEEEEcC-C--CeEEEEECC-CCCCcEeEE-EecCCCCceeEEcccc
Confidence 7889999887653 3222111 23456679986555553 2 479999984 222222222 3332221233443
Q ss_pred -cCCcEEEEcCCCCCceeEE
Q 048136 178 -ADGSFLIFGGRDSFSYEYI 196 (559)
Q Consensus 178 -~dG~VyvvGG~~~~s~E~y 196 (559)
+||+.+.++.....++.++
T Consensus 252 ~pDGk~l~v~n~~~~~v~Vi 271 (567)
T 1qks_A 252 GWEDKYAIAGAYWPPQYVIM 271 (567)
T ss_dssp TCTTTEEEEEEEETTEEEEE
T ss_pred CCCCCEEEEEEccCCeEEEE
Confidence 3887666666555556666
No 210
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=74.42 E-value=99 Score=33.28 Aligned_cols=88 Identities=7% Similarity=-0.071 Sum_probs=49.6
Q ss_pred eeEEEeCCC-----CCEEeCccCCCcc--------------cccCeecCCCcEEEEcCCC--------------------
Q 048136 101 HSVFYNVNT-----LQVTPLKVITDTW--------------CSSGGLDVNGNLISTGGFL-------------------- 141 (559)
Q Consensus 101 ~~~~yDp~t-----~~w~~~~~~~~~~--------------c~~~~~l~dG~i~v~GG~~-------------------- 141 (559)
...+||..+ ++.+.+....... ..+...-+||+.++++...
T Consensus 142 ~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~ 221 (706)
T 2z3z_A 142 NLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESK 221 (706)
T ss_dssp EEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEE
T ss_pred eEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceE
Confidence 367888888 7776654332220 1334566899988877521
Q ss_pred ----------CCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCcEEEEcCCC
Q 048136 142 ----------GGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGSFLIFGGRD 189 (559)
Q Consensus 142 ----------~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~ 189 (559)
.+...+++||.. +.+-..+.............+.-+||+.++++..+
T Consensus 222 ~~~y~~~g~~~~~~~l~~~d~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 278 (706)
T 2z3z_A 222 PLYYPMAGTPSHHVTVGIYHLA-TGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVN 278 (706)
T ss_dssp EECCCBTTSCCCEEEEEEEETT-TTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEEC
T ss_pred EeeCCCCCCCCCeeEEEEEECC-CCceEeeccCCCCceeEeeEEEECCCCEEEEEEeC
Confidence 123568889987 66544432101122333345556799866665443
No 211
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=73.73 E-value=66 Score=30.94 Aligned_cols=135 Identities=15% Similarity=0.034 Sum_probs=67.2
Q ss_pred eEEEeCCCCCEEeCccC----CCcccccCeecC-CCcEEEEcCCC--------------CCCCeEEEEeCCCCCCeecCC
Q 048136 102 SVFYNVNTLQVTPLKVI----TDTWCSSGGLDV-NGNLISTGGFL--------------GGSRTTRYLWGCPTCDWTEYP 162 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~----~~~~c~~~~~l~-dG~i~v~GG~~--------------~g~~~v~~ydp~~t~~W~~~~ 162 (559)
...||+.+++.+.+... ...+....++.. +|+||+.-... .....+.+||+. +.+...+.
T Consensus 103 i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~-~~~~~~~~ 181 (322)
T 2fp8_A 103 LSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPS-TKETTLLL 181 (322)
T ss_dssp EEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETT-TTEEEEEE
T ss_pred EEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCC-CCEEEEec
Confidence 34567666555444321 112233456667 89999973210 112468899997 66554332
Q ss_pred CccccccccceEEEccCCc-EEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccce-EEEeeCCcEEEEe
Q 048136 163 TALKDGRWYATQALLADGS-FLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPF-VYLVPDGNLYIFA 239 (559)
Q Consensus 163 ~~m~~~R~y~s~~~L~dG~-VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~-~~~l~~G~iyv~G 239 (559)
..+.. -.+.+.-+||+ +||.--. ...+.+| ..............+ . . |. +.+-.+|+||+..
T Consensus 182 ~~~~~---p~gia~~~dg~~lyv~d~~-~~~I~~~~~~~~~~~~~~~~~~~-~---------g-P~gi~~d~~G~l~va~ 246 (322)
T 2fp8_A 182 KELHV---PGGAEVSADSSFVLVAEFL-SHQIVKYWLEGPKKGTAEVLVKI-P---------N-PGNIKRNADGHFWVSS 246 (322)
T ss_dssp EEESC---CCEEEECTTSSEEEEEEGG-GTEEEEEESSSTTTTCEEEEEEC-S---------S-EEEEEECTTSCEEEEE
T ss_pred cCCcc---CcceEECCCCCEEEEEeCC-CCeEEEEECCCCcCCccceEEeC-C---------C-CCCeEECCCCCEEEEe
Confidence 21222 23455666776 7776322 1335556 332110011111110 0 1 32 3344589999874
Q ss_pred c------------CcEEEeeCCCCe
Q 048136 240 N------------NRSILLDPRANY 252 (559)
Q Consensus 240 g------------~~~e~yDp~t~~ 252 (559)
. ..+.+||+....
T Consensus 247 ~~~~~~~~~~~~~~~v~~~d~~G~~ 271 (322)
T 2fp8_A 247 SEELDGNMHGRVDPKGIKFDEFGNI 271 (322)
T ss_dssp EEETTSSTTSCEEEEEEEECTTSCE
T ss_pred cCcccccccCCCccEEEEECCCCCE
Confidence 2 247889997543
No 212
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=72.70 E-value=1.4e+02 Score=34.24 Aligned_cols=108 Identities=7% Similarity=-0.011 Sum_probs=60.1
Q ss_pred eecCCCcEEEEcCCCCCCCeEE-EEeCCCCCCeecCCCccccccccceEEEccCCcEEEEcCCCCCceeEE-cCCCCCCC
Q 048136 127 GLDVNGNLISTGGFLGGSRTTR-YLWGCPTCDWTEYPTALKDGRWYATQALLADGSFLIFGGRDSFSYEYI-PAERTENA 204 (559)
Q Consensus 127 ~~l~dG~i~v~GG~~~g~~~v~-~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~ 204 (559)
... ||+.+++++. ...++ +||.. +.+...+.. ........+.-+||+.++.+..+. .+.+| ..+++
T Consensus 344 ~~s-dg~~l~~~s~---~~~l~~~~d~~-~~~~~~l~~---~~~~~~~~~~SpDG~~la~~~~~~-~v~~~d~~tg~--- 411 (1045)
T 1k32_A 344 GGD-TKVAFIHGTR---EGDFLGIYDYR-TGKAEKFEE---NLGNVFAMGVDRNGKFAVVANDRF-EIMTVDLETGK--- 411 (1045)
T ss_dssp CSS-SEEEEEEEET---TEEEEEEEETT-TCCEEECCC---CCCSEEEEEECTTSSEEEEEETTS-EEEEEETTTCC---
T ss_pred eEc-CCCeEEEEEC---CCceEEEEECC-CCCceEecC---CccceeeeEECCCCCEEEEECCCC-eEEEEECCCCc---
Confidence 344 8877666654 25777 88987 665544421 222234556677999888876543 44555 44331
Q ss_pred cceeccccccccccccCCccceEEEeeCCcEEEEec------------CcEEEeeCCCCeEE
Q 048136 205 YSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN------------NRSILLDPRANYVL 254 (559)
Q Consensus 205 w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg------------~~~e~yDp~t~~W~ 254 (559)
-. ...... ..........+||+.+++++ ..+.+||..+++..
T Consensus 412 ~~---~~~~~~-----~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~ 465 (1045)
T 1k32_A 412 PT---VIERSR-----EAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIF 465 (1045)
T ss_dssp EE---EEEECS-----SSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEE
T ss_pred eE---EeccCC-----CCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEE
Confidence 11 111110 01112334568999776653 25788999988754
No 213
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=71.36 E-value=92 Score=31.58 Aligned_cols=65 Identities=17% Similarity=0.084 Sum_probs=33.7
Q ss_pred eCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCccceeeeEECCCCceEEeCCCCCC
Q 048136 349 PTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANLLPDGRVFVGGSNDND 422 (559)
Q Consensus 349 pdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~llpdG~Vlv~GG~~~~ 422 (559)
-+|+||..|-...|.-+... . .....+-|..-..+.+..++ .-.+| +++|.-||+||..|.+..+
T Consensus 260 ~~g~v~~wG~n~~gqlg~~~--~--~~~~~~~p~~~~~~~v~~ia----~G~~h-t~alt~~G~v~~wG~n~~G 324 (423)
T 3mvd_K 260 QTQVIWATGLNNFKQLAHET--K--GKEFALTPIKTELKDIRHIA----GGQHH-TVILTTDLKCSVVGRPEYG 324 (423)
T ss_dssp TTCCEEEEEECTTCTTSSCC--T--TCSEEEEEEEECCCSEEEEE----ECSSE-EEEEETTCCEEEEECCGGG
T ss_pred CCCeEEEEeCCCCCcCCCCC--C--CCceeeeeEEcCCCCeEEEE----cccCe-EEEEeCCCcEEEEECCCCC
Confidence 68999999854433322210 0 01112222211011444443 23456 4566789999999987543
No 214
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=69.51 E-value=77 Score=29.97 Aligned_cols=122 Identities=13% Similarity=0.094 Sum_probs=56.2
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCc
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGS 181 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~ 181 (559)
..+|| .+++...................+|+|++. .. . +.+||+.....|.... .... ..+.+.. +|.
T Consensus 42 l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~-t~----~-l~~~d~~g~~~~~~~~---~~~~-~~~~~~~-~~~ 109 (330)
T 3hxj_A 42 LYAIN-TDGSVKWFFKSGEIIECRPSIGKDGTIYFG-SD----K-VYAINPDGTEKWRFDT---KKAI-VSDFTIF-EDI 109 (330)
T ss_dssp TEEEC-TTSCEEESSCGGGEEEECCEETTTTEECCS-SC----E-EEEECCCGGGGGGSCC---------CCEEEE-TTE
T ss_pred EEEEC-CCCcEEEEEecCCCcccceEEecCCcEEEe-cC----c-EEEECCCCcEEEEEEC---CCCc-ccCceEE-CCE
Confidence 35677 555533222222222233344457887763 21 2 8889985223464321 1111 1223333 888
Q ss_pred EEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEec-CcEEEeeCC
Q 048136 182 FLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN-NRSILLDPR 249 (559)
Q Consensus 182 VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg-~~~e~yDp~ 249 (559)
||+... + ..+-+| +. ++ ..|....+. ..........+|+||+... ..+.+||+.
T Consensus 110 l~v~t~-~-~~l~~~d~~-g~-~~~~~~~~~----------~~~~~~~~~~~g~l~vgt~~~~l~~~d~~ 165 (330)
T 3hxj_A 110 LYVTSM-D-GHLYAINTD-GT-EKWRFKTKK----------AIYATPIVSEDGTIYVGSNDNYLYAINPD 165 (330)
T ss_dssp EEEECT-T-SEEEEECTT-SC-EEEEEECSS----------CCCSCCEECTTSCEEEECTTSEEEEECTT
T ss_pred EEEEec-C-CEEEEEcCC-CC-EEEEEcCCC----------ceeeeeEEcCCCEEEEEcCCCEEEEECCC
Confidence 887532 2 224445 44 32 123322110 0111122334888887654 567889998
No 215
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=68.38 E-value=1.1e+02 Score=31.20 Aligned_cols=55 Identities=13% Similarity=-0.062 Sum_probs=33.0
Q ss_pred eeeEEEeCCCCCEEe-CccCC------CcccccCeecCCCc-EEEEcCCCCCCCeEEEEeCCCCCC
Q 048136 100 CHSVFYNVNTLQVTP-LKVIT------DTWCSSGGLDVNGN-LISTGGFLGGSRTTRYLWGCPTCD 157 (559)
Q Consensus 100 ~~~~~yDp~t~~w~~-~~~~~------~~~c~~~~~l~dG~-i~v~GG~~~g~~~v~~ydp~~t~~ 157 (559)
..+..||+.|++... +.... .......++.+||+ +|+.... ..+++.++|.. +.+
T Consensus 109 ~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~--~~~~VsVID~~-t~~ 171 (386)
T 3sjl_D 109 DYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS--PAPAVGVVDLE-GKA 171 (386)
T ss_dssp EEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS--SSCEEEEEETT-TTE
T ss_pred CEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcC--CCCeEEEEECC-CCc
Confidence 347899999988643 32211 12333456778997 4554221 23678899987 554
No 216
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=68.02 E-value=1.7e+02 Score=33.21 Aligned_cols=69 Identities=13% Similarity=0.155 Sum_probs=35.2
Q ss_pred eEEEccCCcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEec--CcEEEeeCC
Q 048136 173 TQALLADGSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN--NRSILLDPR 249 (559)
Q Consensus 173 s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg--~~~e~yDp~ 249 (559)
+++.-+||+++++|+.++ .+.+| .... .....+ ... . ... .+.-.+ |++++.++ ..+.+||..
T Consensus 22 ~lafspdg~~lAsgs~Dg-~I~lw~~~~~-----~~~~~~-~~~-~----~V~-~l~fsp-g~~L~S~s~D~~v~lWd~~ 87 (902)
T 2oaj_A 22 AAAFDFTQNLLAIATVTG-EVHIYGQQQV-----EVVIKL-EDR-S----AIK-EMRFVK-GIYLVVINAKDTVYVLSLY 87 (902)
T ss_dssp EEEEETTTTEEEEEETTS-EEEEECSTTC-----EEEEEC-SSC-C----CEE-EEEEET-TTEEEEEETTCEEEEEETT
T ss_pred EEEECCCCCEEEEEeCCC-EEEEEeCCCc-----EEEEEc-CCC-C----CEE-EEEEcC-CCEEEEEECcCeEEEEECC
Confidence 455556888888887664 45566 2211 111111 000 0 001 122234 77555554 468899998
Q ss_pred CCeEEE
Q 048136 250 ANYVLR 255 (559)
Q Consensus 250 t~~W~~ 255 (559)
+++...
T Consensus 88 ~~~~~~ 93 (902)
T 2oaj_A 88 SQKVLT 93 (902)
T ss_dssp TCSEEE
T ss_pred CCcEEE
Confidence 876543
No 217
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=64.11 E-value=72 Score=31.22 Aligned_cols=49 Identities=4% Similarity=-0.136 Sum_probs=31.7
Q ss_pred eEEEeCCCCCEEe-CccC-CCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCC
Q 048136 102 SVFYNVNTLQVTP-LKVI-TDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGC 153 (559)
Q Consensus 102 ~~~yDp~t~~w~~-~~~~-~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~ 153 (559)
..+||..+++... +..- +........+-+||+.+++|+.. ..+++||..
T Consensus 220 v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d---~~v~iw~~~ 270 (355)
T 3vu4_A 220 IRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDK---WTLHVFEIF 270 (355)
T ss_dssp EEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETT---CEEEEEESS
T ss_pred EEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECC---CEEEEEEcc
Confidence 5788988765432 2211 33333344566899999999873 588999975
No 218
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=64.05 E-value=93 Score=29.55 Aligned_cols=67 Identities=15% Similarity=0.251 Sum_probs=35.8
Q ss_pred EEEeeCCeEEEEc---CcCCCCCCcc-CCCCCCcccEEEeCCCCCCCeEEecCCCCCCccceeeeEECCCCc-eEEeCC
Q 048136 345 GVLLPTGDVLLIN---GAELGSAGWK-DADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANLLPDGR-VFVGGS 418 (559)
Q Consensus 345 av~LpdG~V~vvG---G~~~g~~g~~-~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~llpdG~-Vlv~GG 418 (559)
.++-+||+||+.- |......+.. ........+.+|||++. +++.+..+ .+ ....++.|||+ +|++..
T Consensus 136 i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g---~~~~~~~~--~~--p~gl~~spdg~~lyv~~~ 207 (305)
T 3dr2_A 136 LIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGS---PLQRMADL--DH--PNGLAFSPDEQTLYVSQT 207 (305)
T ss_dssp EEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSC---CCEEEEEE--SS--EEEEEECTTSSEEEEEEC
T ss_pred EEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCC---cEEEEecC--CC--CcceEEcCCCCEEEEEec
Confidence 5677899999973 2210000000 00011235788999887 76655321 11 12345789998 667654
No 219
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=63.57 E-value=1.6e+02 Score=31.54 Aligned_cols=85 Identities=12% Similarity=-0.139 Sum_probs=46.3
Q ss_pred eEEEeCCCCCEEeCccCCCc---ccccCeecCCCcEEEEcCCCCC------CCeEEEEeCCCCCCeecCCCccccc-ccc
Q 048136 102 SVFYNVNTLQVTPLKVITDT---WCSSGGLDVNGNLISTGGFLGG------SRTTRYLWGCPTCDWTEYPTALKDG-RWY 171 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~---~c~~~~~l~dG~i~v~GG~~~g------~~~v~~ydp~~t~~W~~~~~~m~~~-R~y 171 (559)
..+||+.+++-..+...+.. .....++-+||+.++++..... ...++++|.. +.+-..+.. .... .+.
T Consensus 39 i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~-~~~~~~l~~-~~~~~~~~ 116 (723)
T 1xfd_A 39 VRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIP-HGDPQSLDP-PEVSNAKL 116 (723)
T ss_dssp EEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESS-SCCCEECCC-TTCCSCCC
T ss_pred EEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECC-CCceEeccC-Cccccccc
Confidence 56788887766544332221 1223456789998887754221 2578899988 665544432 1111 111
Q ss_pred ceEEEccCCcEEEEcCC
Q 048136 172 ATQALLADGSFLIFGGR 188 (559)
Q Consensus 172 ~s~~~L~dG~VyvvGG~ 188 (559)
...+.-+||+.++.+..
T Consensus 117 ~~~~~SPdG~~la~~~~ 133 (723)
T 1xfd_A 117 QYAGWGPKGQQLIFIFE 133 (723)
T ss_dssp SBCCBCSSTTCEEEEET
T ss_pred cccEECCCCCEEEEEEC
Confidence 22334458876666543
No 220
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=63.54 E-value=74 Score=32.62 Aligned_cols=130 Identities=13% Similarity=0.159 Sum_probs=70.1
Q ss_pred CCcEEEEec-CcEEEeeCCCCeEEEECCCCCCCCCcccCCCceeecccccccccccccCcE-EEEEcCCCCccccccccc
Q 048136 232 DGNLYIFAN-NRSILLDPRANYVLREYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAE-VLICGGSVPEAFYFGEVE 309 (559)
Q Consensus 232 ~G~iyv~Gg-~~~e~yDp~t~~W~~~~p~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gk-I~v~GG~~~~~~~~~~~~ 309 (559)
+|+||+.-- ..+.+||+.+++.....+. ...| .++.+. .+++ ||++.-....
T Consensus 149 ~g~Lyv~d~~~~I~~id~~~~~v~~~~~~-----~~~P---~~ia~d----------~~G~~lyvad~~~~~-------- 202 (430)
T 3tc9_A 149 HNHLYLVGEQHPTRLIDFEKEYVSTVYSG-----LSKV---RTICWT----------HEADSMIITNDQNNN-------- 202 (430)
T ss_dssp EEEEEEEEBTEEEEEEETTTTEEEEEECC-----CSCE---EEEEEC----------TTSSEEEEEECCSCT--------
T ss_pred CCeEEEEeCCCcEEEEECCCCEEEEEecC-----CCCc---ceEEEe----------CCCCEEEEEeCCCCc--------
Confidence 488898754 5678899999887743321 1122 122221 1444 8888643210
Q ss_pred cccccccCceEEEEecCCCCcee---ee-cCCCCcccccEEEee-CCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCC
Q 048136 310 KRLVPALDDCARMVVTSPDPVWT---TE-KMPTPRVMSDGVLLP-TGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKP 384 (559)
Q Consensus 310 ~~~~~a~~s~~~~d~~~~~~~W~---~~-~M~~~R~~~~av~Lp-dG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~ 384 (559)
....+..++.. ..|. .. .+..+ +..++-| +|+||+.--.. ..+.+||+++.
T Consensus 203 -----~~~~v~~~~~~---g~~~~~~~l~~~~~p---~giavdp~~g~lyv~d~~~-------------~~V~~~~~~~~ 258 (430)
T 3tc9_A 203 -----DRPNNYILTRE---SGFKVITELTKGQNC---NGAETHPINGELYFNSWNA-------------GQVFRYDFTTQ 258 (430)
T ss_dssp -----TSEEEEEEEGG---GTSCSEEEEEECSSC---CCEEECTTTCCEEEEETTT-------------TEEEEEETTTT
T ss_pred -----ccceEEEEeCC---CceeeeeeeccCCCc---eEEEEeCCCCEEEEEECCC-------------CEEEEEECCCC
Confidence 01123334433 2333 11 33332 2245567 89999975321 16889999876
Q ss_pred CCCeEEe---cCCCCCCccceeeeEECCCCc-eEEeCC
Q 048136 385 PGSRFTE---LAPSDIPRMYHSVANLLPDGR-VFVGGS 418 (559)
Q Consensus 385 ~g~~Wt~---~~~~~~~R~yhs~a~llpdG~-Vlv~GG 418 (559)
..+. +.....|| ..++.|||+ +|++-.
T Consensus 259 ---~~~~~~~~~~~~~P~----gia~~pdG~~lyv~d~ 289 (430)
T 3tc9_A 259 ---ETTPLFTIQDSGWEF----HIQFHPSGNYAYIVVV 289 (430)
T ss_dssp ---EEEEEEECSSSSCCE----EEEECTTSSEEEEEET
T ss_pred ---cEEEEEEcCCCCcce----eEEEcCCCCEEEEEEC
Confidence 5422 22333343 245789998 888843
No 221
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=61.19 E-value=97 Score=31.26 Aligned_cols=42 Identities=14% Similarity=0.159 Sum_probs=26.3
Q ss_pred ccEEEeCCCCCCCeEE-ecCCCCCCccceeeeEECCCCceEEeCCCCC
Q 048136 375 KPLLYKPSKPPGSRFT-ELAPSDIPRMYHSVANLLPDGRVFVGGSNDN 421 (559)
Q Consensus 375 ~~e~YDP~t~~g~~Wt-~~~~~~~~R~yhs~a~llpdG~Vlv~GG~~~ 421 (559)
++.+||..+. +-. .+..-. ... .+.+..-|||+.+++|+.+.
T Consensus 306 TIkIWDl~tG---k~l~tL~gH~-~~v-vs~vafSPDG~~LaSGS~D~ 348 (356)
T 2w18_A 306 TIAIWDLLLG---QCTALLPPVS-DQH-WSFVKWSGTDSHLLAGQKDG 348 (356)
T ss_dssp CEEEEETTTC---SEEEEECCC---CC-CCEEEECSSSSEEEEECTTS
T ss_pred cEEEEECCCC---cEEEEecCCC-CCe-EEEEEECCCCCEEEEEECCC
Confidence 7899999887 433 332111 111 12356789999999998643
No 222
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=59.91 E-value=1.1e+02 Score=33.18 Aligned_cols=113 Identities=7% Similarity=-0.010 Sum_probs=60.7
Q ss_pred ccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCe-----ecCCCccc-----cccccceEEEccCCcEEEEcCCCCCce
Q 048136 124 SSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDW-----TEYPTALK-----DGRWYATQALLADGSFLIFGGRDSFSY 193 (559)
Q Consensus 124 ~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W-----~~~~~~m~-----~~R~y~s~~~L~dG~VyvvGG~~~~s~ 193 (559)
.+-+.-+||+.+++||. + .++++||.. ++.- ..+.. +. +..|-.+++-.+|| +++++.+ .++
T Consensus 133 ~svafSPDG~~LAsgs~-D--GtVkIWd~~-~~~l~~~~~i~l~t-i~~~~~gh~~~V~sVawSPdg--Laass~D-~tV 204 (588)
T 2j04_A 133 HCFEWNPIESSIVVGNE-D--GELQFFSIR-KNSENTPEFYFESS-IRLSDAGSKDWVTHIVWYEDV--LVAALSN-NSV 204 (588)
T ss_dssp EEEEECSSSSCEEEEET-T--SEEEEEECC-CCTTTCCCCEEEEE-EECSCTTCCCCEEEEEEETTE--EEEEETT-CCE
T ss_pred EEEEEcCCCCEEEEEcC-C--CEEEEEECC-CCccccccceeeee-eecccccccccEEEEEEcCCc--EEEEeCC-CeE
Confidence 34556689999999997 3 589999987 5431 01111 11 22366677777888 6666654 456
Q ss_pred eEE-cCCCCCC-CcceeccccccccccccCCccceEEEeeCCcEEEEecCcEEEeeCCCCeE
Q 048136 194 EYI-PAERTEN-AYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFANNRSILLDPRANYV 253 (559)
Q Consensus 194 E~y-P~~~~~~-~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg~~~e~yDp~t~~W 253 (559)
.+| ...+.-. .+....+ ..++ .....++. +..|...++..+.+||..++.-
T Consensus 205 rlWd~~~~~~~~~~~tL~~---~h~~----~V~svaFs--g~~LASa~~~tIkLWd~~~~~~ 257 (588)
T 2j04_A 205 FSMTVSASSHQPVSRMIQN---ASRR----KITDLKIV--DYKVVLTCPGYVHKIDLKNYSI 257 (588)
T ss_dssp EEECCCSSSSCCCEEEEEC---CCSS----CCCCEEEE--TTEEEEECSSEEEEEETTTTEE
T ss_pred EEEECCCCccccceeeecc---cccC----cEEEEEEE--CCEEEEEeCCeEEEEECCCCeE
Confidence 667 4332100 0000001 1100 01122232 4344444456789999998875
No 223
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=59.23 E-value=2e+02 Score=31.21 Aligned_cols=79 Identities=10% Similarity=0.007 Sum_probs=40.1
Q ss_pred eEEEeCCCCC--EEeCccCC-----Cccc---ccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCC--CeecCCCcccccc
Q 048136 102 SVFYNVNTLQ--VTPLKVIT-----DTWC---SSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTC--DWTEYPTALKDGR 169 (559)
Q Consensus 102 ~~~yDp~t~~--w~~~~~~~-----~~~c---~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~--~W~~~~~~m~~~R 169 (559)
...+|.+|++ |+.-.... ...| ..+..+.+++||+.... ..+..+|.. +. .|+.-... ....
T Consensus 78 v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d----g~l~alD~~-tG~~~W~~~~~~-~~~~ 151 (668)
T 1kv9_A 78 VIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLD----GRLIALDAK-TGKAIWSQQTTD-PAKP 151 (668)
T ss_dssp EEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTT----SEEEEEETT-TCCEEEEEECSC-TTSS
T ss_pred EEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCC----CEEEEEECC-CCCEeeeeccCC-CCCc
Confidence 5667877765 65432111 1123 13345567888776432 478889987 55 48753210 1111
Q ss_pred cc-ceEEEccCCcEEEEc
Q 048136 170 WY-ATQALLADGSFLIFG 186 (559)
Q Consensus 170 ~y-~s~~~L~dG~VyvvG 186 (559)
+. .+..++.+|+||+..
T Consensus 152 ~~~~~~P~v~~~~v~vg~ 169 (668)
T 1kv9_A 152 YSITGAPRVVKGKVIIGN 169 (668)
T ss_dssp CBCCSCCEEETTEEEECC
T ss_pred ceecCCCEEECCEEEEeC
Confidence 11 122233478888753
No 224
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=55.78 E-value=17 Score=39.26 Aligned_cols=129 Identities=19% Similarity=0.216 Sum_probs=65.7
Q ss_pred CCCCCeEEecCCCCCCccceeeeEECCCCceEEeCCCCCCCCcccCCCCCcceeeEEcCCCCCCCcCCCCCcccccCCCC
Q 048136 383 KPPGSRFTELAPSDIPRMYHSVANLLPDGRVFVGGSNDNDGYQEWAKFPTELRLEKFSPPYLAPELADRRPMILVDETEK 462 (559)
Q Consensus 383 t~~g~~Wt~~~~~~~~R~yhs~a~llpdG~Vlv~GG~~~~~~~~~~~~~~~~~~E~y~Ppyl~~~~~~~RP~i~~~~~p~ 462 (559)
.+.|++|+....+.......+..+.++||+|+++.-.. . ......|.+..|... ..| .... +.
T Consensus 305 ~D~G~tW~~~~~l~~~~~~Y~~l~~~~dg~i~~~ye~~-~----------~i~~~~~~~~~l~~~---~~~-~~~~--~~ 367 (601)
T 1w8o_A 305 CDDGQTWPVSKVFQPGSMSYSTLTALPDGTYGLLYEPG-T----------GIRYANFNLAWLGGI---CAP-FTIP--DV 367 (601)
T ss_dssp SSTTSCCCEEEEEEEEECCCEEEEECTTSCEEEEECCS-S----------EEEEEEECHHHHTBC---SCC-EECC--CE
T ss_pred CCCCCCCCCceEeCCCCCCCCeEEEcCCCeEEEEEecC-C----------cceEEEecHHHhccc---cCC-CcCc--cc
Confidence 35577898643221122222455668999998885321 1 234556777666532 122 1211 45
Q ss_pred ccCCCCeEEEEEEecc--ccccceEEEEEEcCCcccccccCCcceEEeeeeeeecccCCC---cEEEEEEcCCCCCccCC
Q 048136 463 AAPYGKWVGIKVKSAE--MLNEFDLMVTMIAPPFVTHSISMNQRLIELAIIEIKNDVYPG---VHEVVVAMPPSGNIAPP 537 (559)
Q Consensus 463 ~~~~g~~~~v~~~~~~--~~~~~~~~v~l~~~~~~TH~~~~~qR~v~l~~~~~~~~~~~g---~~~~~v~~P~~~~~~pp 537 (559)
++..|++++|++.... .......+++|..+.-.+= +- .+... .+| ...++|++|.. +.+
T Consensus 368 ~~~~g~~~~~~~~vtn~~~~~~~~~~~~~~~~~~~~~------~~-~~~~~------~~g~~~t~~~~vt~~~~---~~~ 431 (601)
T 1w8o_A 368 ALEPGQQVTVPVAVTNQSGIAVPKPSLQLDASPDWQV------QG-SVEPL------MPGRQAKGQVTITVPAG---TTP 431 (601)
T ss_dssp EECTTCEEEEEEEEECCSSSCBSSCEEEEECCTTSEE------EE-EECCB------CTTCEEEEEEEEECCTT---CCC
T ss_pred eecCCceeEEEEEEECCCceeccCceEEEecCCCcEE------ec-ccccc------CCCCceEEEEEEecCCC---CCC
Confidence 6788888777776322 1112235677666443321 11 11110 112 23347788774 448
Q ss_pred cceEEEE
Q 048136 538 GYYMLSV 544 (559)
Q Consensus 538 G~ymlf~ 544 (559)
|.|+|=+
T Consensus 432 g~y~l~~ 438 (601)
T 1w8o_A 432 GRYRVGA 438 (601)
T ss_dssp EEEEEEE
T ss_pred CcEEeeE
Confidence 9997743
No 225
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=54.05 E-value=44 Score=33.72 Aligned_cols=18 Identities=22% Similarity=0.195 Sum_probs=14.8
Q ss_pred ccceEEEccCCcEEEEcC
Q 048136 170 WYATQALLADGSFLIFGG 187 (559)
Q Consensus 170 ~y~s~~~L~dG~VyvvGG 187 (559)
.+++++...||+||..|-
T Consensus 222 ~~~t~~l~~~G~v~~wG~ 239 (389)
T 3kci_A 222 DAQTLCLTDDDTVWSWGD 239 (389)
T ss_dssp SCEEEEEETTTEEEEEEC
T ss_pred CcEEEEEccCCEEEEEeC
Confidence 367888888999999984
No 226
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=52.76 E-value=1.4e+02 Score=27.47 Aligned_cols=138 Identities=16% Similarity=0.024 Sum_probs=69.7
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecC-CCcEEEEcCCCCCCCeEEEEeCCCCCCeecCC-CccccccccceEEEcc-
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDV-NGNLISTGGFLGGSRTTRYLWGCPTCDWTEYP-TALKDGRWYATQALLA- 178 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~-dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~-~~m~~~R~y~s~~~L~- 178 (559)
...+|+....-+.+.........+.++.+ +|+||++-.. .....++++++. ...-..+. ..+. +-.+.+.-+
T Consensus 103 I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~-~~~~~I~~~~~d-g~~~~~~~~~~~~---~P~gia~d~~ 177 (267)
T 1npe_A 103 IEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWN-RDNPKIETSHMD-GTNRRILAQDNLG---LPNGLTFDAF 177 (267)
T ss_dssp EEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECC-SSSCEEEEEETT-SCCCEEEECTTCS---CEEEEEEETT
T ss_pred EEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECC-CCCcEEEEEecC-CCCcEEEEECCCC---CCcEEEEcCC
Confidence 45666654333322111111223344555 6889988532 113578888886 33222221 1122 222344444
Q ss_pred CCcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEe--cCcEEEeeCCCCeEEE
Q 048136 179 DGSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFA--NNRSILLDPRANYVLR 255 (559)
Q Consensus 179 dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~G--g~~~e~yDp~t~~W~~ 255 (559)
++++|+.--.. ..+.++ +... . ...+... ..+|.....-+++||+.- +..+.++|+.+++...
T Consensus 178 ~~~lyv~d~~~-~~I~~~~~~g~----~--~~~~~~~-------~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~~ 243 (267)
T 1npe_A 178 SSQLCWVDAGT-HRAECLNPAQP----G--RRKVLEG-------LQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEMD 243 (267)
T ss_dssp TTEEEEEETTT-TEEEEEETTEE----E--EEEEEEC-------CCSEEEEEEETTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CCEEEEEECCC-CEEEEEecCCC----c--eEEEecC-------CCCceEEEEeCCEEEEEECCCCeEEEEeCCCCCceE
Confidence 36788875432 345566 4321 1 0111111 134555555578899874 4678999999988765
Q ss_pred ECC
Q 048136 256 EYP 258 (559)
Q Consensus 256 ~~p 258 (559)
.++
T Consensus 244 ~i~ 246 (267)
T 1npe_A 244 TFH 246 (267)
T ss_dssp EEC
T ss_pred EEc
Confidence 554
No 227
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=52.76 E-value=1.7e+02 Score=28.29 Aligned_cols=60 Identities=17% Similarity=0.055 Sum_probs=37.4
Q ss_pred CeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCcEEEEcCC
Q 048136 126 GGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGSFLIFGGR 188 (559)
Q Consensus 126 ~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~ 188 (559)
.+.-+||+.+++....++...++++|.. +.+-..+.. -.... ....+.-+||+.++....
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~-~g~~~~lt~-~~~~~-~~~~~~spdg~~l~~~~~ 100 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLN-TQVATQLTE-GRGDN-TFGGFLSPDDDALFYVKD 100 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETT-TCEEEECCC-SSCBC-SSSCEECTTSSEEEEEET
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCC-CCceEEeee-CCCCC-ccceEEcCCCCEEEEEeC
Confidence 4567899977777654555679999998 776665543 22111 112345568876666553
No 228
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=52.66 E-value=2.4e+02 Score=30.10 Aligned_cols=79 Identities=14% Similarity=-0.028 Sum_probs=47.6
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCC-----CCeecCCCcccccc-------
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPT-----CDWTEYPTALKDGR------- 169 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t-----~~W~~~~~~m~~~R------- 169 (559)
..+||..+++.+.+..... .......-+||+.+++.. + ..++++|.. + .+...+.. .....
T Consensus 103 i~~~d~~~~~~~~l~~~~~-~~~~~~~SpdG~~la~~~--~--~~i~v~~~~-~~~~~~g~~~~~~~-~~~~~~~~g~~~ 175 (706)
T 2z3z_A 103 LVGFDMLARKVTYLFDTNE-ETASLDFSPVGDRVAYVR--N--HNLYIARGG-KLGEGMSRAIAVTI-DGTETLVYGQAV 175 (706)
T ss_dssp EEEEETTTTEEEEEECCTT-CCTTCEECTTSSEEEEEE--T--TEEEEEECB-CTTSCCCCCEESCS-CCBTTEEESSCC
T ss_pred EEEEECCCCceEEccCCcc-cccCCcCCCCCCEEEEEE--C--CeEEEEecC-cccccCCCcEEecc-CCCCCeEcccch
Confidence 5788888887766543221 222345678998777742 2 579999987 6 55554432 11110
Q ss_pred ------ccceEEEccCCcEEEEcC
Q 048136 170 ------WYATQALLADGSFLIFGG 187 (559)
Q Consensus 170 ------~y~s~~~L~dG~VyvvGG 187 (559)
...+.+.-+||+.++++.
T Consensus 176 ~~ee~~~~~~~~~SpDg~~la~~~ 199 (706)
T 2z3z_A 176 HQREFGIEKGTFWSPKGSCLAFYR 199 (706)
T ss_dssp GGGCTTCCCSEEECTTSSEEEEEE
T ss_pred hhhhcCCCceEEECCCCCEEEEEE
Confidence 023455667998888775
No 229
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=51.07 E-value=81 Score=30.16 Aligned_cols=102 Identities=16% Similarity=0.049 Sum_probs=55.2
Q ss_pred cceeEEEeecCCCeEEEEecccccccCCCCCCCCCCCCccccccccccCCccceeeEEEeCCCCCEEeCccCCCcccccC
Q 048136 47 ISAMHSVLLPNVDEMVIFDATVWQISRLPLPDYKRPCPMHQNKATNVTNIDCWCHSVFYNVNTLQVTPLKVITDTWCSSG 126 (559)
Q Consensus 47 ~~~~h~~~~~~~gkv~~~gg~~~~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~yDp~t~~w~~~~~~~~~~c~~~ 126 (559)
..+...++- ++|++|+.+..+ + ....||+..+ ......... .-.+-
T Consensus 32 ~~pegia~~-~~g~lyv~d~~~------------~-------------------~I~~~d~~g~-~~~~~~~~~-~p~gi 77 (306)
T 2p4o_A 32 TFLENLASA-PDGTIFVTNHEV------------G-------------------EIVSITPDGN-QQIHATVEG-KVSGL 77 (306)
T ss_dssp CCEEEEEEC-TTSCEEEEETTT------------T-------------------EEEEECTTCC-EEEEEECSS-EEEEE
T ss_pred CCcceEEEC-CCCCEEEEeCCC------------C-------------------eEEEECCCCc-eEEEEeCCC-CceeE
Confidence 345566666 688999887421 1 1466777653 222111111 11233
Q ss_pred eecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCcEEEE
Q 048136 127 GLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGSFLIF 185 (559)
Q Consensus 127 ~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~Vyvv 185 (559)
++..||++|+.....+ ...+..||+. +.+.+.+.. +...|.-.+.+...++++|+.
T Consensus 78 a~~~dG~l~vad~~~~-~~~v~~~d~~-~g~~~~~~~-~~~~~~~~g~~~~~~~~~~v~ 133 (306)
T 2p4o_A 78 AFTSNGDLVATGWNAD-SIPVVSLVKS-DGTVETLLT-LPDAIFLNGITPLSDTQYLTA 133 (306)
T ss_dssp EECTTSCEEEEEECTT-SCEEEEEECT-TSCEEEEEE-CTTCSCEEEEEESSSSEEEEE
T ss_pred EEcCCCcEEEEeccCC-cceEEEEcCC-CCeEEEEEe-CCCccccCcccccCCCcEEEE
Confidence 4557899998753211 2357788987 677665433 333344344455556666765
No 230
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=49.84 E-value=1.1e+02 Score=32.69 Aligned_cols=92 Identities=15% Similarity=0.016 Sum_probs=54.8
Q ss_pred eeEEEeCC-CC---CEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCC---ccccccccc-
Q 048136 101 HSVFYNVN-TL---QVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPT---ALKDGRWYA- 172 (559)
Q Consensus 101 ~~~~yDp~-t~---~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~---~m~~~R~y~- 172 (559)
...++|.. ++ +.+.+...+..........+||++|+++.. ++...++.+|+. +.++..+.. ....+.|.+
T Consensus 218 ~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~-~~~~~l~~~~~~-~~~~~~l~~~~~~~~~p~w~~~ 295 (662)
T 3azo_A 218 ELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDR-TGWWNLHRVDPA-TGAATQLCRREEEFAGPLWTPG 295 (662)
T ss_dssp EEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECT-TSSCEEEEECTT-TCCEEESSCCSSBSSCCCCSTT
T ss_pred EEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECC-CCCeEEEEEECC-CCceeecccccccccCcccccc
Confidence 36778887 56 444443222222223445679998877654 455589999987 778877643 112234432
Q ss_pred --eEEEccCCcEEEEcCCCCCceeEE
Q 048136 173 --TQALLADGSFLIFGGRDSFSYEYI 196 (559)
Q Consensus 173 --s~~~L~dG~VyvvGG~~~~s~E~y 196 (559)
+.+..+||++++.+.. ....+|
T Consensus 296 ~~~~~~~~~~~~~~~~~~--~~~~l~ 319 (662)
T 3azo_A 296 MRWFAPLANGLIAVVHGK--GAAVLG 319 (662)
T ss_dssp CCSEEECTTSCEEEEEBS--SSCEEE
T ss_pred CceEeEeCCCEEEEEEEc--CccEEE
Confidence 3455568999888765 345555
No 231
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=49.48 E-value=47 Score=33.24 Aligned_cols=89 Identities=9% Similarity=-0.048 Sum_probs=47.9
Q ss_pred eEEEeCCCCCEEeCccC--CCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEc--
Q 048136 102 SVFYNVNTLQVTPLKVI--TDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALL-- 177 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~--~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L-- 177 (559)
..+||..+.+....-.. +........+.++|+++++|+.. ..+++||.. +.+....-. +.....-.+++..
T Consensus 194 i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d---g~i~iwd~~-~~~~~~~~~-~~~~~~v~~~~~~~~ 268 (437)
T 3gre_A 194 VIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR---GIIDIWDIR-FNVLIRSWS-FGDHAPITHVEVCQF 268 (437)
T ss_dssp EEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT---SCEEEEETT-TTEEEEEEB-CTTCEEEEEEEECTT
T ss_pred EEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC---CeEEEEEcC-CccEEEEEe-cCCCCceEEEEeccc
Confidence 67899887765332211 22223334456789999999873 579999987 544322100 1111111112111
Q ss_pred --cCCcEEEEcCCCCCceeEE
Q 048136 178 --ADGSFLIFGGRDSFSYEYI 196 (559)
Q Consensus 178 --~dG~VyvvGG~~~~s~E~y 196 (559)
+||+.++.|+.++ .+.+|
T Consensus 269 ~s~~~~~l~s~~~dg-~i~iw 288 (437)
T 3gre_A 269 YGKNSVIVVGGSSKT-FLTIW 288 (437)
T ss_dssp TCTTEEEEEEESTTE-EEEEE
T ss_pred cCCCccEEEEEcCCC-cEEEE
Confidence 3677888887654 34455
No 232
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=49.38 E-value=2e+02 Score=29.41 Aligned_cols=23 Identities=22% Similarity=0.205 Sum_probs=18.6
Q ss_pred CcEEEEec-CcEEEeeCCCCeEEE
Q 048136 233 GNLYIFAN-NRSILLDPRANYVLR 255 (559)
Q Consensus 233 G~iyv~Gg-~~~e~yDp~t~~W~~ 255 (559)
|+||+.-. ..+.++|+.+++...
T Consensus 153 g~Lyv~D~~~~I~~id~~~g~v~~ 176 (433)
T 4hw6_A 153 DDLYWVGQRDAFRHVDFVNQYVDI 176 (433)
T ss_dssp CEEEEECBTSCEEEEETTTTEEEE
T ss_pred CEEEEEeCCCCEEEEECCCCEEEE
Confidence 89998743 678899999998774
No 233
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=48.93 E-value=1.7e+02 Score=27.36 Aligned_cols=102 Identities=17% Similarity=0.139 Sum_probs=51.1
Q ss_pred CCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCcEEEEcCCCCCceeEE-cCCCCCCCccee
Q 048136 130 VNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGSFLIFGGRDSFSYEYI-PAERTENAYSIP 208 (559)
Q Consensus 130 ~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~ 208 (559)
.+|.|++.... ..+..||+.....|..... ... ..+.+...+|+||+.. .+ ..+-+| +. ++ ..|...
T Consensus 106 ~~~~l~v~t~~----~~l~~~d~~g~~~~~~~~~---~~~-~~~~~~~~~g~l~vgt-~~-~~l~~~d~~-g~-~~~~~~ 173 (330)
T 3hxj_A 106 FEDILYVTSMD----GHLYAINTDGTEKWRFKTK---KAI-YATPIVSEDGTIYVGS-ND-NYLYAINPD-GT-EKWRFK 173 (330)
T ss_dssp ETTEEEEECTT----SEEEEECTTSCEEEEEECS---SCC-CSCCEECTTSCEEEEC-TT-SEEEEECTT-SC-EEEEEE
T ss_pred ECCEEEEEecC----CEEEEEcCCCCEEEEEcCC---Cce-eeeeEEcCCCEEEEEc-CC-CEEEEECCC-CC-EeEEEe
Confidence 38888775321 4688899862334654321 111 2233445578888743 21 234445 44 32 123222
Q ss_pred ccccccccccccCCccceEEEeeCCcEEEEecCcEEEeeCCCC-eEE
Q 048136 209 FQFLRDTYDVLENNLYPFVYLVPDGNLYIFANNRSILLDPRAN-YVL 254 (559)
Q Consensus 209 ~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg~~~e~yDp~t~-~W~ 254 (559)
.+. ........-.+|+||+.. ..+.+||+... .|.
T Consensus 174 ~~~----------~~~~~~~~d~~g~l~v~t-~~l~~~d~~g~~~~~ 209 (330)
T 3hxj_A 174 TND----------AITSAASIGKDGTIYFGS-DKVYAINPDGTEKWN 209 (330)
T ss_dssp CSS----------CCCSCCEECTTCCEEEES-SSEEEECTTSCEEEE
T ss_pred cCC----------CceeeeEEcCCCEEEEEe-CEEEEECCCCcEEEE
Confidence 110 011112233588999877 77889995432 454
No 234
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=48.00 E-value=1.6e+02 Score=28.27 Aligned_cols=56 Identities=18% Similarity=0.096 Sum_probs=35.7
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecC-CCcEEEEcCCC-------------CCCCeEEEEeCCCCCCeecC
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDV-NGNLISTGGFL-------------GGSRTTRYLWGCPTCDWTEY 161 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~-dG~i~v~GG~~-------------~g~~~v~~ydp~~t~~W~~~ 161 (559)
..+||+.+++.+.+..... +. ....+ ||+++++.+.. ++...++++|+. +.+...+
T Consensus 266 l~~~d~~~g~~~~l~~~~~--~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~-~~~~~~l 335 (396)
T 3c5m_A 266 IYKANPETLENEEVMVMPP--CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTK-AKSAQKL 335 (396)
T ss_dssp EEEECTTTCCEEEEEECCS--EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETT-TTBCCEE
T ss_pred EEEEECCCCCeEEeeeCCC--CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecc-cCceEEc
Confidence 6788998888776543322 22 44566 99988875421 134678999987 6665443
No 235
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=46.61 E-value=3.3e+02 Score=29.88 Aligned_cols=140 Identities=15% Similarity=0.148 Sum_probs=67.1
Q ss_pred eEEEeCCCCCEEeCccCC-------CcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCC------ccccc
Q 048136 102 SVFYNVNTLQVTPLKVIT-------DTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPT------ALKDG 168 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~-------~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~------~m~~~ 168 (559)
..+||+.+++++...... ...-..-....+|.|++.- . ..+.+||+. +.++..... .+...
T Consensus 237 l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt-~----~Gl~~~~~~-~~~~~~~~~~~~~~~~l~~~ 310 (795)
T 4a2l_A 237 LFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGT-F----NDLNIYHEG-TDSFASYSSNPVENGSLSQR 310 (795)
T ss_dssp EEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEE-S----SCEEEEETT-TTEEEEECCCTTSTTSCSSS
T ss_pred eEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEEe-C----ChhheEcCC-CCeEEEEecCCCCCCCCCCC
Confidence 467898888877653221 1111112334578887742 2 147789998 787765431 12222
Q ss_pred cccceEEEccCCcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEEeeCCcEEEEec-CcEEEe
Q 048136 169 RWYATQALLADGSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN-NRSILL 246 (559)
Q Consensus 169 R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg-~~~e~y 246 (559)
. -.+...-.+|.++|-- . ...+.+| +..+. .......... .....+.--..+.-.+|+|++-.. ....+|
T Consensus 311 ~-i~~i~~D~~g~lWigt-~-~~Gl~~~~~~~~~---~~~~~~~~~~--~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~ 382 (795)
T 4a2l_A 311 S-VRSIFMDSQGGMWLGT-Y-FGGLNYYHPIRNR---FKNIRNIPYK--NSLSDNVVSCIVEDKDKNLWIGTNDGGLNLY 382 (795)
T ss_dssp C-EEEEEECTTSCEEEEE-S-SSCEEEECGGGGS---SEEECCCTTS--SSCSCSSEEEEEECTTSCEEEEESSSCEEEE
T ss_pred c-EEEEEEeCCcCEEEEE-C-CCCeEEeCCCccc---ceEEcCCCCC--CCCCCCeeEEEEECCCCCEEEEECCCCeEEE
Confidence 2 2234444578888742 1 1123344 33221 1111100000 000001111112223688887543 368899
Q ss_pred eCCCCeEEE
Q 048136 247 DPRANYVLR 255 (559)
Q Consensus 247 Dp~t~~W~~ 255 (559)
|+.++++..
T Consensus 383 ~~~~~~~~~ 391 (795)
T 4a2l_A 383 NPITQRFTS 391 (795)
T ss_dssp CTTTCCEEE
T ss_pred cCCCCcEEE
Confidence 999988873
No 236
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=46.51 E-value=1.1e+02 Score=32.60 Aligned_cols=123 Identities=7% Similarity=0.030 Sum_probs=62.3
Q ss_pred eeCCcEEEEec--CcEEEeeC-CCC--eEEEECCCCCCCCCcccCC---CceeecccccccccccccCcEEEEEcCCCCc
Q 048136 230 VPDGNLYIFAN--NRSILLDP-RAN--YVLREYPPLPGGARNYPST---STSVLLPLKLYRDYYARVDAEVLICGGSVPE 301 (559)
Q Consensus 230 l~~G~iyv~Gg--~~~e~yDp-~t~--~W~~~~p~mp~~~~~~p~~---g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~ 301 (559)
+.+|+||+... ..+.++|. +++ .|..... .+.....++.+ ..++.+ .+++||+....
T Consensus 60 v~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~-~~~~~~~~~~~~~~~~~~~~-----------~~~~v~v~~~d--- 124 (571)
T 2ad6_A 60 VIGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPK-QDASTKAVMCCDVVDRGLAY-----------GAGQIVKKQAN--- 124 (571)
T ss_dssp EETTEEEEECSTTTCEEEEETTCTTSEEEEECCC-CCGGGGGGCTTCSCCCCCEE-----------ETTEEEEECTT---
T ss_pred EECCEEEEEeCCCCEEEEEeCCCCccEEEEEcCC-CCccccccccccccccccEE-----------ECCEEEEEeCC---
Confidence 45999999876 46889999 776 4764322 11000000000 011111 37788776431
Q ss_pred cccccccccccccccCceEEEEecCCCCceeee-cC-CCCcccccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEE
Q 048136 302 AFYFGEVEKRLVPALDDCARMVVTSPDPVWTTE-KM-PTPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLY 379 (559)
Q Consensus 302 ~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M-~~~R~~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~Y 379 (559)
..+..+|..+....|+.. .- ........+-++.+|+||+...... +. .-..+..|
T Consensus 125 ---------------g~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~----~~----~~g~v~a~ 181 (571)
T 2ad6_A 125 ---------------GHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAE----LG----VRGAVNAF 181 (571)
T ss_dssp ---------------SEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGG----GT----CCCEEEEE
T ss_pred ---------------CEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCc----cC----CCCEEEEE
Confidence 234567766545678865 21 1111111123445899887543210 00 01267899
Q ss_pred eCCCCCCCeEEe
Q 048136 380 KPSKPPGSRFTE 391 (559)
Q Consensus 380 DP~t~~g~~Wt~ 391 (559)
|+++.+- .|+.
T Consensus 182 D~~tG~~-~W~~ 192 (571)
T 2ad6_A 182 DLKTGEL-KWRA 192 (571)
T ss_dssp ETTTCCE-EEEE
T ss_pred ECCCCcE-EEEE
Confidence 9987622 5764
No 237
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=43.80 E-value=3.5e+02 Score=29.43 Aligned_cols=126 Identities=10% Similarity=-0.066 Sum_probs=64.1
Q ss_pred eEEEeCCCCCEEeCccC--C-CcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCC-CccccccccceEEEc
Q 048136 102 SVFYNVNTLQVTPLKVI--T-DTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYP-TALKDGRWYATQALL 177 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~--~-~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~-~~m~~~R~y~s~~~L 177 (559)
..+||+.+++++.+... . .....+.....+|+|++.. . .-+.+|||. +.++.... +.|+... -.+.+ .
T Consensus 495 l~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt-~----~Gl~~~~~~-~~~~~~~~~~gl~~~~-i~~i~-~ 566 (758)
T 3ott_A 495 IDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGF-H----GGVMRINPK-DESQQSISFGSFSNNE-ILSMT-C 566 (758)
T ss_dssp EEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEEE-T----TEEEEECC---CCCCBCCCCC---CC-EEEEE-E
T ss_pred cEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEEe-c----CceEEEecC-CCceEEecccCCCccc-eEEEE-E
Confidence 46789999888875321 1 1111122344578898753 2 247889998 77776542 1133221 12233 3
Q ss_pred cCCcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEE-EeeCCcEEEEecCcEEEeeCCC
Q 048136 178 ADGSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVY-LVPDGNLYIFANNRSILLDPRA 250 (559)
Q Consensus 178 ~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~-~l~~G~iyv~Gg~~~e~yDp~t 250 (559)
.+|++++... . ..-+| |++.+ .. ...+ .. ..+.... ...+|+||+-+.+...+|||+.
T Consensus 567 ~~g~lWi~t~-~--Gl~~~~~~~~~---~~-~~~~-~~-------~~~~~~~~~~~~G~l~fG~~~Gl~~f~p~~ 626 (758)
T 3ott_A 567 VKNSIWVSTT-N--GLWIIDRKTMD---AR-QQNM-TN-------KRFTSLLFDPKEDCVYLGGADGFGISHSNL 626 (758)
T ss_dssp ETTEEEEEES-S--CEEEEETTTCC---EE-EC---CC-------CCCSEEEEETTTTEEEEECBSEEEEEEC--
T ss_pred CCCCEEEECC-C--CeEEEcCCCce---eE-EecC-CC-------CceeeeEEECCCCcEEEecCCceEEEChhh
Confidence 4788887653 2 24556 76542 11 1111 10 1122222 2358999977777788999973
No 238
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=42.77 E-value=1.6e+02 Score=28.29 Aligned_cols=75 Identities=11% Similarity=-0.113 Sum_probs=43.3
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCC---ccccccccceEEEcc
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPT---ALKDGRWYATQALLA 178 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~---~m~~~R~y~s~~~L~ 178 (559)
..+||+.+++.+.+...... .+.+...||++++... ..+.+||+. +.++..+.. .....| -...+.-+
T Consensus 73 i~~~d~~~~~~~~~~~~~~v--~~i~~~~dg~l~v~~~-----~gl~~~d~~-~g~~~~~~~~~~~~~~~~-~~~i~~d~ 143 (326)
T 2ghs_A 73 LHELHLASGRKTVHALPFMG--SALAKISDSKQLIASD-----DGLFLRDTA-TGVLTLHAELESDLPGNR-SNDGRMHP 143 (326)
T ss_dssp EEEEETTTTEEEEEECSSCE--EEEEEEETTEEEEEET-----TEEEEEETT-TCCEEEEECSSTTCTTEE-EEEEEECT
T ss_pred EEEEECCCCcEEEEECCCcc--eEEEEeCCCeEEEEEC-----CCEEEEECC-CCcEEEEeeCCCCCCCCC-CCCEEECC
Confidence 56789888776654322111 2233457899888642 358899998 777665432 011122 22345566
Q ss_pred CCcEEEE
Q 048136 179 DGSFLIF 185 (559)
Q Consensus 179 dG~Vyvv 185 (559)
+|++|+.
T Consensus 144 ~G~l~v~ 150 (326)
T 2ghs_A 144 SGALWIG 150 (326)
T ss_dssp TSCEEEE
T ss_pred CCCEEEE
Confidence 8888774
No 239
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=42.53 E-value=2.1e+02 Score=30.54 Aligned_cols=29 Identities=28% Similarity=0.455 Sum_probs=21.6
Q ss_pred EeeCCcEEEEec-CcEEEeeCCCC--eEEEEC
Q 048136 229 LVPDGNLYIFAN-NRSILLDPRAN--YVLREY 257 (559)
Q Consensus 229 ~l~~G~iyv~Gg-~~~e~yDp~t~--~W~~~~ 257 (559)
++.+|+||+... ..+..+|.+++ .|....
T Consensus 65 ~v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~ 96 (582)
T 1flg_A 65 IVSDGVIYVTASYSRLFALDAKTGKRLWTYNH 96 (582)
T ss_dssp EEETTEEEEEETTTEEEEEESSSCCEEEEEEC
T ss_pred EEECCEEEEEcCCCCEEEEECCCCcEEEEEcC
Confidence 346999999876 56889999876 477543
No 240
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=39.65 E-value=2.4e+02 Score=29.85 Aligned_cols=90 Identities=12% Similarity=-0.020 Sum_probs=49.4
Q ss_pred eeEEEeCCCCCEEeCccCCCcc--------cccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccc
Q 048136 101 HSVFYNVNTLQVTPLKVITDTW--------CSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYA 172 (559)
Q Consensus 101 ~~~~yDp~t~~w~~~~~~~~~~--------c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~ 172 (559)
....+|+.+++++.+...+... ....++..||++++.+.. +...++.+|.. +.+...+.. .. ....
T Consensus 266 ~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~d~~-~~~~~~l~~--~~-~~~~ 339 (662)
T 3azo_A 266 NLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK--GAAVLGILDPE-SGELVDAAG--PW-TEWA 339 (662)
T ss_dssp EEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS--SSCEEEEEETT-TTEEEECCS--SC-CEEE
T ss_pred EEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc--CccEEEEEECC-CCcEEEecC--CC-CeEE
Confidence 3667888888888875432211 112233468998888764 55677778987 666665542 11 1122
Q ss_pred eEEEccCCcEEEEcCCCCCceeEE
Q 048136 173 TQALLADGSFLIFGGRDSFSYEYI 196 (559)
Q Consensus 173 s~~~L~dG~VyvvGG~~~~s~E~y 196 (559)
......+++++++.+......++|
T Consensus 340 ~~~s~~~~~~~~~~~~~~~~~~i~ 363 (662)
T 3azo_A 340 ATLTVSGTRAVGVAASPRTAYEVV 363 (662)
T ss_dssp EEEEEETTEEEEEEEETTEEEEEE
T ss_pred EEEecCCCEEEEEEcCCCCCCEEE
Confidence 221232455665555443334555
No 241
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=37.09 E-value=4.4e+02 Score=28.62 Aligned_cols=131 Identities=10% Similarity=0.076 Sum_probs=65.8
Q ss_pred eCCcEEEEec--CcEEEeeCCCCeEEEECCCCCCCC-CcccCCCceeecccccccccccccCcEEEEEcCCCCccccccc
Q 048136 231 PDGNLYIFAN--NRSILLDPRANYVLREYPPLPGGA-RNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGE 307 (559)
Q Consensus 231 ~~G~iyv~Gg--~~~e~yDp~t~~W~~~~p~mp~~~-~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~ 307 (559)
.+|+|++.++ ....+||++++++.. +.. .... ... -.+++. + .+|.|++.. .. |
T Consensus 481 ~~g~lWi~~~t~~Gl~~~d~~~~~~~~-~~~-~~~~~~~~---~~~i~~--------d--~~g~lWigt-~~-G------ 537 (758)
T 3ott_A 481 NEGNVWVLLYNNKGIDKINPRTREVTK-LFA-DELTGEKS---PNYLLC--------D--EDGLLWVGF-HG-G------ 537 (758)
T ss_dssp TTSCEEEEETTCSSEEEEETTTTEEEE-ECT-TTSCGGGC---EEEEEE--------C--TTSCEEEEE-TT-E------
T ss_pred CCCCEEEEccCCCCcEEEeCCCCceEE-ecC-CCcCCCcc---cceEEE--------C--CCCCEEEEe-cC-c------
Confidence 3788988443 457899999998873 421 1000 011 112221 1 367888643 21 2
Q ss_pred cccccccccCceEEEEecCCCCceee---ecCCCCcccccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCC
Q 048136 308 VEKRLVPALDDCARMVVTSPDPVWTT---EKMPTPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKP 384 (559)
Q Consensus 308 ~~~~~~~a~~s~~~~d~~~~~~~W~~---~~M~~~R~~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~ 384 (559)
..+||+.. .+++. ..++.... .+++-.+|+|++... . -..+|||++.
T Consensus 538 -----------l~~~~~~~--~~~~~~~~~gl~~~~i--~~i~~~~g~lWi~t~--~-------------Gl~~~~~~~~ 587 (758)
T 3ott_A 538 -----------VMRINPKD--ESQQSISFGSFSNNEI--LSMTCVKNSIWVSTT--N-------------GLWIIDRKTM 587 (758)
T ss_dssp -----------EEEECC----CCCCBCCCCC---CCE--EEEEEETTEEEEEES--S-------------CEEEEETTTC
T ss_pred -----------eEEEecCC--CceEEecccCCCccce--EEEEECCCCEEEECC--C-------------CeEEEcCCCc
Confidence 22344432 22221 13333222 234446888888542 2 2478999998
Q ss_pred CCCeEEecCCCCCCccceeeeEECCCCceEEeCCC
Q 048136 385 PGSRFTELAPSDIPRMYHSVANLLPDGRVFVGGSN 419 (559)
Q Consensus 385 ~g~~Wt~~~~~~~~R~yhs~a~llpdG~Vlv~GG~ 419 (559)
++.... ++.... .+.+....||++|+.|-+
T Consensus 588 ---~~~~~~-~~~~~~-~~~~~~~~~G~l~fG~~~ 617 (758)
T 3ott_A 588 ---DARQQN-MTNKRF-TSLLFDPKEDCVYLGGAD 617 (758)
T ss_dssp ---CEEEC---CCCCC-SEEEEETTTTEEEEECBS
T ss_pred ---eeEEec-CCCCce-eeeEEECCCCcEEEecCC
Confidence 776542 211122 234455679999987753
No 242
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=35.37 E-value=2.3e+02 Score=32.36 Aligned_cols=83 Identities=13% Similarity=-0.035 Sum_probs=50.5
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCC-------CCCeEEEEeCCCCCCeecCCCccccccccceE
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLG-------GSRTTRYLWGCPTCDWTEYPTALKDGRWYATQ 174 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~-------g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~ 174 (559)
..+||..+++.+.+...+.......+.-+||+.+++++... ....+++||.. +.+...+.. ........
T Consensus 402 v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~-~g~~~~l~~---~~~~~~~~ 477 (1045)
T 1k32_A 402 IMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDME-GRKIFAATT---ENSHDYAP 477 (1045)
T ss_dssp EEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETT-TTEEEECSC---SSSBEEEE
T ss_pred EEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECC-CCcEEEeeC---CCcccCCc
Confidence 67899999888766533333333445678999887765421 23589999998 666544432 11112234
Q ss_pred EEccCCcEEEEcCC
Q 048136 175 ALLADGSFLIFGGR 188 (559)
Q Consensus 175 ~~L~dG~VyvvGG~ 188 (559)
+.-+||+.++++..
T Consensus 478 ~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 478 AFDADSKNLYYLSY 491 (1045)
T ss_dssp EECTTSCEEEEEES
T ss_pred eEcCCCCEEEEEec
Confidence 55678886655543
No 243
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=33.90 E-value=1.1e+02 Score=32.10 Aligned_cols=137 Identities=15% Similarity=0.127 Sum_probs=74.6
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCC-CCeEEEEeCCCCCCeecCCCccccccccceEEEccCC
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGG-SRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADG 180 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g-~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG 180 (559)
..+||..+++.+.+...+. .....-+||+.+++++...+ ...++++|.. +.++..+.. ........+.-+||
T Consensus 134 ~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~~~~i~~~d~~-~g~~~~l~~---~~~~~~~~~~SpDG 206 (582)
T 3o4h_A 134 VALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLS-SGGLRVFDS---GEGSFSSASISPGM 206 (582)
T ss_dssp EEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETTEEEEEEEETT-TCCCEEECC---SSCEEEEEEECTTS
T ss_pred ceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCCCeEEEEEcCC-CCCceEeec---CCCccccceECCCC
Confidence 3488998888776654332 23455689999997765322 2578999988 777776542 11222345566799
Q ss_pred cEEEEcCCCCC-ceeEE-cCCCCCCCcceecccccccc-ccc-cCCc-cceEEEeeCCcEEEEec--CcEEEeeCCCCeE
Q 048136 181 SFLIFGGRDSF-SYEYI-PAERTENAYSIPFQFLRDTY-DVL-ENNL-YPFVYLVPDGNLYIFAN--NRSILLDPRANYV 253 (559)
Q Consensus 181 ~VyvvGG~~~~-s~E~y-P~~~~~~~w~~~~p~l~~~~-d~~-~~~~-yp~~~~l~~G~iyv~Gg--~~~e~yDp~t~~W 253 (559)
+.++.+..++. .+.+| ..+++ .. .+.... +.. .... .......+||++++.+. ....+|+. ++.
T Consensus 207 ~~l~~~~~~~~~~i~~~d~~~~~---~~----~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~ 277 (582)
T 3o4h_A 207 KVTAGLETAREARLVTVDPRDGS---VE----DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GER 277 (582)
T ss_dssp CEEEEEECSSCEEEEEECTTTCC---EE----ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEE
T ss_pred CEEEEccCCCeeEEEEEcCCCCc---EE----EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCe
Confidence 98885544331 33344 33321 11 111100 000 0000 00011467998888764 45778888 554
Q ss_pred E
Q 048136 254 L 254 (559)
Q Consensus 254 ~ 254 (559)
.
T Consensus 278 ~ 278 (582)
T 3o4h_A 278 V 278 (582)
T ss_dssp E
T ss_pred e
Confidence 3
No 244
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=33.17 E-value=3.7e+02 Score=26.64 Aligned_cols=29 Identities=7% Similarity=-0.059 Sum_probs=20.0
Q ss_pred CcEEecCCCCCcceeEEEeecCCCeEEEEec
Q 048136 36 GKWELLPNNPGISAMHSVLLPNVDEMVIFDA 66 (559)
Q Consensus 36 g~W~~~~~~~~~~~~h~~~~~~~gkv~~~gg 66 (559)
.+.+.++.. --.+.+++.+ ++|++||...
T Consensus 22 ~~~~~va~g-L~~P~~ia~~-pdG~llVter 50 (347)
T 3das_A 22 KVLRTVATG-LNSPWGLAPL-PGGDLLVSSR 50 (347)
T ss_dssp EEEEEEECC-CSSEEEEEEC-TTSCEEEEET
T ss_pred ceeEEeecC-CCCceEEEEc-CCCcEEEEEe
Confidence 355556542 2356788888 8999999886
No 245
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=32.96 E-value=73 Score=34.85 Aligned_cols=97 Identities=13% Similarity=0.169 Sum_probs=51.6
Q ss_pred cCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeee-cCCCCc--------ccccEEEeeCCeEEEEcC
Q 048136 288 VDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTE-KMPTPR--------VMSDGVLLPTGDVLLING 358 (559)
Q Consensus 288 ~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R--------~~~~av~LpdG~V~vvGG 358 (559)
.+++||+.... ..+..+|..+....|+.. ..+... ... ++++-+++||+...
T Consensus 65 ~~g~vyv~~~~------------------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~~~ 125 (668)
T 1kv9_A 65 HDGVIYTSMSW------------------SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNR-GVALWGDKVYVGTL 125 (668)
T ss_dssp ETTEEEEEEGG------------------GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCC-CCEEEBTEEEEECT
T ss_pred ECCEEEEECCC------------------CeEEEEECCCChhceEECCCCCccccccccccCCcc-ceEEECCEEEEEcC
Confidence 37888887542 234567766555678875 322110 011 24556888888532
Q ss_pred cCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCccceeeeEECCCCceEEeCC
Q 048136 359 AELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSVANLLPDGRVFVGGS 418 (559)
Q Consensus 359 ~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~a~llpdG~Vlv~GG 418 (559)
. + .+..+|+++.+- .|+....-.........+-++.+|+||+..+
T Consensus 126 d--g------------~l~alD~~tG~~-~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~ 170 (668)
T 1kv9_A 126 D--G------------RLIALDAKTGKA-IWSQQTTDPAKPYSITGAPRVVKGKVIIGNG 170 (668)
T ss_dssp T--S------------EEEEEETTTCCE-EEEEECSCTTSSCBCCSCCEEETTEEEECCB
T ss_pred C--C------------EEEEEECCCCCE-eeeeccCCCCCcceecCCCEEECCEEEEeCC
Confidence 1 1 578899887622 6876432111111122222334888888654
No 246
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=32.17 E-value=2e+02 Score=27.64 Aligned_cols=54 Identities=15% Similarity=0.252 Sum_probs=33.4
Q ss_pred EEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCC--CCccceeeeEECCCCceEEeC
Q 048136 346 VLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSD--IPRMYHSVANLLPDGRVFVGG 417 (559)
Q Consensus 346 v~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~--~~R~yhs~a~llpdG~Vlv~G 417 (559)
+..+||++||.. .. .+.+||+++. +++.+.... .+........+.+||++|++.
T Consensus 96 ~~~~dg~l~v~~--~~-------------gl~~~d~~~g---~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~ 151 (326)
T 2ghs_A 96 AKISDSKQLIAS--DD-------------GLFLRDTATG---VLTLHAELESDLPGNRSNDGRMHPSGALWIGT 151 (326)
T ss_dssp EEEETTEEEEEE--TT-------------EEEEEETTTC---CEEEEECSSTTCTTEEEEEEEECTTSCEEEEE
T ss_pred EEeCCCeEEEEE--CC-------------CEEEEECCCC---cEEEEeeCCCCCCCCCCCCEEECCCCCEEEEe
Confidence 456899998853 11 3678999888 776553321 111112235678999998864
No 247
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=32.00 E-value=87 Score=34.36 Aligned_cols=98 Identities=15% Similarity=0.173 Sum_probs=52.0
Q ss_pred cCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeee-cCCCC-----cc--cccEEEeeCCeEEEEcCc
Q 048136 288 VDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTE-KMPTP-----RV--MSDGVLLPTGDVLLINGA 359 (559)
Q Consensus 288 ~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~-----R~--~~~av~LpdG~V~vvGG~ 359 (559)
.+++||++... ..+..+|..+....|+.. ..+.. ++ ...++++-+|+||+...
T Consensus 69 ~~g~vyv~~~~------------------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~- 129 (689)
T 1yiq_A 69 VDGVMYTTGPF------------------SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL- 129 (689)
T ss_dssp ETTEEEEECGG------------------GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-
T ss_pred ECCEEEEEcCC------------------CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc-
Confidence 37888887532 235567776555678875 33211 00 01124556888888542
Q ss_pred CCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCcc-ceeeeEECCCCceEEeCC
Q 048136 360 ELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRM-YHSVANLLPDGRVFVGGS 418 (559)
Q Consensus 360 ~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~-yhs~a~llpdG~Vlv~GG 418 (559)
+ + .+..+|.++.+- .|+........+. ....+.++.+|+||+..+
T Consensus 130 d-g------------~l~AlDa~TG~~-~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~ 175 (689)
T 1yiq_A 130 D-G------------RLEAIDAKTGQR-AWSVDTRADHKRSYTITGAPRVVNGKVVIGNG 175 (689)
T ss_dssp T-S------------EEEEEETTTCCE-EEEEECCSCTTSCCBCCSCCEEETTEEEECCB
T ss_pred C-C------------EEEEEECCCCCE-eeeecCcCCCCCCccccCCcEEECCEEEEEeC
Confidence 1 1 568899877622 5876432111111 111222334899988654
No 248
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=31.62 E-value=1e+02 Score=29.18 Aligned_cols=102 Identities=14% Similarity=0.169 Sum_probs=58.7
Q ss_pred CeecCCCcEEEEcCCCCCCCeEEEEeCC--CCCCeecCCCccccc--cccceEEEccCCcEEEEcCCCCCceeEE-cCCC
Q 048136 126 GGLDVNGNLISTGGFLGGSRTTRYLWGC--PTCDWTEYPTALKDG--RWYATQALLADGSFLIFGGRDSFSYEYI-PAER 200 (559)
Q Consensus 126 ~~~l~dG~i~v~GG~~~g~~~v~~ydp~--~t~~W~~~~~~m~~~--R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~ 200 (559)
..+.+||.||++ . +| .+++.+|- ..+.|...+...-.. +-++....-++|.||.+. ++.-+... |...
T Consensus 93 ~~fD~~G~LYav-~--dG--~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~ 165 (236)
T 1tl2_A 93 LFFDPNGYLYAV-S--KD--KLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSN 165 (236)
T ss_dssp EEECTTSCEEEE-E--TT--EEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSST
T ss_pred EEECCCCCEEEe-C--CC--EEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCC
Confidence 456679999999 2 33 67777772 256786553311111 234666777899999998 33222333 5332
Q ss_pred CCCCcceeccccccccccccCCccceEEEeeCCcEEEEe
Q 048136 201 TENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFA 239 (559)
Q Consensus 201 ~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~G 239 (559)
. ..|......+-+ ...+.|.+.+..++|.||.+-
T Consensus 166 ~-~~wl~~~~~~g~----~g~~~yr~l~f~~~G~l~~v~ 199 (236)
T 1tl2_A 166 Q-DNWLARATKIGQ----GGWDTFKFLFFSSVGTLFGVQ 199 (236)
T ss_dssp T-CCHHHHCEEEES----SSGGGEEEEEECTTSCEEEEE
T ss_pred C-cccccccceecc----CCcceEEEEEECCCCcEEEEe
Confidence 1 345332222221 124567777777899999774
No 249
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=31.34 E-value=5.3e+02 Score=27.85 Aligned_cols=81 Identities=16% Similarity=0.044 Sum_probs=40.7
Q ss_pred eEEEeCCCCC--EEeCccCC-----Cccc---ccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCC--eecCCC-ccccc
Q 048136 102 SVFYNVNTLQ--VTPLKVIT-----DTWC---SSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCD--WTEYPT-ALKDG 168 (559)
Q Consensus 102 ~~~yDp~t~~--w~~~~~~~-----~~~c---~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~--W~~~~~-~m~~~ 168 (559)
...+|..|++ |+.-.... ...| ..+..+.+++||+.... ..+..+|.. +.+ |+.-.. .....
T Consensus 89 v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~d----g~l~alD~~-tG~~~W~~~~~~~~~~~ 163 (677)
T 1kb0_A 89 VHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWD----GRLIALDAA-TGKEVWHQNTFEGQKGS 163 (677)
T ss_dssp EEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTT----SEEEEEETT-TCCEEEEEETTTTCCSS
T ss_pred EEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCC----CEEEEEECC-CCCEEeeecCCcCcCcC
Confidence 5667877765 65432211 0122 12445567888776432 468889987 553 865321 01100
Q ss_pred cccceEEEccCCcEEEEcC
Q 048136 169 RWYATQALLADGSFLIFGG 187 (559)
Q Consensus 169 R~y~s~~~L~dG~VyvvGG 187 (559)
....+..++.+|+||+..+
T Consensus 164 ~~~~~~p~v~~~~v~v~~~ 182 (677)
T 1kb0_A 164 LTITGAPRVFKGKVIIGNG 182 (677)
T ss_dssp CBCCSCCEEETTEEEECCB
T ss_pred cccccCcEEECCEEEEEec
Confidence 1112222344788877543
No 250
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=31.33 E-value=4e+02 Score=26.85 Aligned_cols=135 Identities=15% Similarity=0.093 Sum_probs=66.1
Q ss_pred cEEEeeCCCCeEEEECCCCCCCCCcccCCCceeecccccccccccccCcEEEEEcCCCC-ccccccccccccccccCceE
Q 048136 242 RSILLDPRANYVLREYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVP-EAFYFGEVEKRLVPALDDCA 320 (559)
Q Consensus 242 ~~e~yDp~t~~W~~~~p~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~-~~~~~~~~~~~~~~a~~s~~ 320 (559)
.+.++|+.+++....++. +. .| ..++-| ...++|++.-... +.. ....+.+.
T Consensus 60 ~V~ViD~~t~~v~~~I~v---G~--~P---~va~sp----------DG~~lyVan~~~~r~~~---------G~~~~~Vs 112 (386)
T 3sjl_D 60 QQFVIDGEAGRVIGMIDG---GF--LP---NPVVAD----------DGSFIAHASTVFSRIAR---------GERTDYVE 112 (386)
T ss_dssp EEEEEETTTTEEEEEEEE---CS--SC---EEEECT----------TSSCEEEEEEEEEETTE---------EEEEEEEE
T ss_pred EEEEEECCCCeEEEEEEC---CC--CC---cEEECC----------CCCEEEEEccccccccc---------CCCCCEEE
Confidence 578899999987755531 11 12 222222 1345777642100 000 00124567
Q ss_pred EEEecCCCCceeee-cCCC-Cc-----ccccEEEeeCCe-EEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCeEEec
Q 048136 321 RMVVTSPDPVWTTE-KMPT-PR-----VMSDGVLLPTGD-VLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSRFTEL 392 (559)
Q Consensus 321 ~~d~~~~~~~W~~~-~M~~-~R-----~~~~av~LpdG~-V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~ 392 (559)
.||+.. .+-... +.+. .| .-....+-|||+ +||.+.... .++-+.|.++. +-...
T Consensus 113 viD~~t--~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~------------~~VsVID~~t~---~vv~t 175 (386)
T 3sjl_D 113 VFDPVT--LLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPA------------PAVGVVDLEGK---AFKRM 175 (386)
T ss_dssp EECTTT--CCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSS------------CEEEEEETTTT---EEEEE
T ss_pred EEECCC--CeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCC------------CeEEEEECCCC---cEEEE
Confidence 777653 222222 3332 11 223356778996 666653210 16788999887 43321
Q ss_pred CCCC-----CCccceeeeEECCCCceEEeCCCC
Q 048136 393 APSD-----IPRMYHSVANLLPDGRVFVGGSND 420 (559)
Q Consensus 393 ~~~~-----~~R~yhs~a~llpdG~Vlv~GG~~ 420 (559)
=+.+ .|-.-+....+.+||++++..-..
T Consensus 176 I~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~ 208 (386)
T 3sjl_D 176 LDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGT 208 (386)
T ss_dssp EECCSEEEEEEEETTEEEEEETTSCEEEEECCS
T ss_pred EECCCcceeecCCCceeEEECCCCCEEEEECCC
Confidence 1111 111111223566899988876543
No 251
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=30.99 E-value=1e+02 Score=32.87 Aligned_cols=97 Identities=9% Similarity=0.181 Sum_probs=51.6
Q ss_pred CcEEEEEcCCCCccccccccccccccccCceEEEEe-cCCCCceeee-cCCCC-c----c--cccEEEeeCCeEEEEcCc
Q 048136 289 DAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVV-TSPDPVWTTE-KMPTP-R----V--MSDGVLLPTGDVLLINGA 359 (559)
Q Consensus 289 ~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~-~~~~~~W~~~-~M~~~-R----~--~~~av~LpdG~V~vvGG~ 359 (559)
+++||+....+ ..+.++|+ .+....|+.. ..... + + ....+++-+|+||+....
T Consensus 62 ~g~vyv~~~~~-----------------~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d 124 (571)
T 2ad6_A 62 GDMMYVHSAFP-----------------NNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQAN 124 (571)
T ss_dssp TTEEEEECSTT-----------------TCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT
T ss_pred CCEEEEEeCCC-----------------CEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeCC
Confidence 78999886521 23566777 5555678875 32211 0 0 011245568999886431
Q ss_pred CCCCCCccCCCCCCcccEEEeCCCCCCCeEEec-CCCCCCccceeeeEECCCCceEEeCC
Q 048136 360 ELGSAGWKDADKPCFKPLLYKPSKPPGSRFTEL-APSDIPRMYHSVANLLPDGRVFVGGS 418 (559)
Q Consensus 360 ~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~-~~~~~~R~yhs~a~llpdG~Vlv~GG 418 (559)
. .+.++|+++.+- .|+.- ..........+.- ++.+|+||+..+
T Consensus 125 g--------------~l~alD~~tG~~-~W~~~~~~~~~~~~~~~~P-~v~~g~v~vg~~ 168 (571)
T 2ad6_A 125 G--------------HLLALDAKTGKI-NWEVEVCDPKVGSTLTQAP-FVAKDTVLMGCS 168 (571)
T ss_dssp S--------------EEEEEETTTCCE-EEEEECCCGGGTCBCCSCC-EEETTEEEEECB
T ss_pred C--------------EEEEEECCCCCE-EEEecCCCCCccceeccCC-EEECCEEEEEec
Confidence 1 567889877522 68753 2211111112222 224888888654
No 252
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=30.04 E-value=2.6e+02 Score=28.34 Aligned_cols=59 Identities=19% Similarity=0.144 Sum_probs=34.9
Q ss_pred cccCeecC-CCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEEEccCCc-EEEEc
Q 048136 123 CSSGGLDV-NGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQALLADGS-FLIFG 186 (559)
Q Consensus 123 c~~~~~l~-dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~dG~-VyvvG 186 (559)
+.+.++.+ +|+||+.-- +...+++||+. +..-..+.. +....|-...+.-++|+ +||+-
T Consensus 228 p~giavdp~~g~lyv~d~---~~~~V~~~~~~-~~~~~~~~~-~~~~~~P~gia~~pdG~~lyv~d 288 (430)
T 3tc9_A 228 CNGAETHPINGELYFNSW---NAGQVFRYDFT-TQETTPLFT-IQDSGWEFHIQFHPSGNYAYIVV 288 (430)
T ss_dssp CCCEEECTTTCCEEEEET---TTTEEEEEETT-TTEEEEEEE-CSSSSCCEEEEECTTSSEEEEEE
T ss_pred ceEEEEeCCCCEEEEEEC---CCCEEEEEECC-CCcEEEEEE-cCCCCcceeEEEcCCCCEEEEEE
Confidence 34455666 899999742 23579999997 554322211 22222333566667887 88864
No 253
>2vov_A MOPE, surface-associated protein; metal-binding protein, oxidized tryptophan, methanotroph bacterium, kunurenine, copper binding; HET: KYN; 1.35A {Methylococcus capsulatus} PDB: 2vox_A* 2vow_A
Probab=29.65 E-value=56 Score=29.74 Aligned_cols=33 Identities=33% Similarity=0.832 Sum_probs=25.0
Q ss_pred CcEEEEEEcCCCCCccCCcceEEEEEc-----------CC----------CCCccEEEEe
Q 048136 520 GVHEVVVAMPPSGNIAPPGYYMLSVVL-----------KG----------IPSPSMWFQV 558 (559)
Q Consensus 520 g~~~~~v~~P~~~~~~ppG~ymlf~~~-----------~g----------vPS~~~~v~i 558 (559)
|..+-.+++|. -|||||+|-| +| ||..+-||.|
T Consensus 278 gaftksitlpk------tgyymlyvanvlevddwsvdadgkltttgevwevpakgcwvni 331 (336)
T 2vov_A 278 GAFTKSITLPK------TGYYMLYVANVLEVDDWSVDADGKLTTTGEVWEVPAKGCWVNI 331 (336)
T ss_dssp TEEEEEEECSS------SEEEEEEEEECCEESEEEECTTCCEEEESCCCCSSSSEEEEEE
T ss_pred ceeeeeeeccC------cceEEEEEeeeEEeccceeccCCceeecceEEeccCCceEEEE
Confidence 45666777886 5999999864 12 8999999887
No 254
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=27.20 E-value=1e+02 Score=33.81 Aligned_cols=99 Identities=14% Similarity=0.177 Sum_probs=52.2
Q ss_pred cCcEEEEEcCCCCccccccccccccccccCceEEEEecCCCCceeee-cCCCCc-------ccccEEEeeCCeEEEEcCc
Q 048136 288 VDAEVLICGGSVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTE-KMPTPR-------VMSDGVLLPTGDVLLINGA 359 (559)
Q Consensus 288 ~~gkI~v~GG~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R-------~~~~av~LpdG~V~vvGG~ 359 (559)
.+++||++... ..+..+|..+....|+.. ..+... .....+++-+++||+....
T Consensus 76 ~~g~vyv~~~~------------------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~d 137 (677)
T 1kb0_A 76 VDGIMYVSASW------------------SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWD 137 (677)
T ss_dssp ETTEEEEECGG------------------GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTT
T ss_pred ECCEEEEECCC------------------CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCC
Confidence 37889887642 235567766545678875 322110 0111345568888885321
Q ss_pred CCCCCCccCCCCCCcccEEEeCCCCCCCeEEecCCCCCCccc-eeeeEECCCCceEEeCCC
Q 048136 360 ELGSAGWKDADKPCFKPLLYKPSKPPGSRFTELAPSDIPRMY-HSVANLLPDGRVFVGGSN 419 (559)
Q Consensus 360 ~~g~~g~~~~~~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~y-hs~a~llpdG~Vlv~GG~ 419 (559)
..+.++|.++.+- .|+.-..-...+.+ ...+.++.+++||+..+.
T Consensus 138 --------------g~l~alD~~tG~~-~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~ 183 (677)
T 1kb0_A 138 --------------GRLIALDAATGKE-VWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGG 183 (677)
T ss_dssp --------------SEEEEEETTTCCE-EEEEETTTTCCSSCBCCSCCEEETTEEEECCBC
T ss_pred --------------CEEEEEECCCCCE-EeeecCCcCcCcCcccccCcEEECCEEEEEecc
Confidence 1567889887522 58753220111111 112223348888887653
No 255
>2jkb_A Sialidase B; intramolecular trans-sialidase, lyase, glycosidase, neuraminidase; HET: SKD; 1.54A {Streptococcus pneumoniae} PDB: 2vw2_A* 2vw1_A* 2vw0_A*
Probab=25.90 E-value=6.8e+02 Score=27.33 Aligned_cols=39 Identities=15% Similarity=0.031 Sum_probs=25.4
Q ss_pred EeCCCCCCCeEEecCCCCCC--ccceeeeEECCCCceEEeC
Q 048136 379 YKPSKPPGSRFTELAPSDIP--RMYHSVANLLPDGRVFVGG 417 (559)
Q Consensus 379 YDP~t~~g~~Wt~~~~~~~~--R~yhs~a~llpdG~Vlv~G 417 (559)
++-..+.|++|+.......+ ..+.+..+.++||+|+++=
T Consensus 617 ~~~S~D~G~TW~~~~~i~~~~~~~~Ys~l~~~~DG~i~ily 657 (686)
T 2jkb_A 617 LVNKEDDSIDWKYHYDIDLPSYGYAYSAITELPNHHIGVLF 657 (686)
T ss_dssp EECTTTCCEEEEEEEESSCTTSBCCSEEEEECTTSCEEEEE
T ss_pred EEeccCCCCcccCCeeecCCCCCccccEEEEeCcCEEEEEE
Confidence 45566778899976444332 2444567778999987663
No 256
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=25.57 E-value=2.9e+02 Score=28.35 Aligned_cols=131 Identities=15% Similarity=0.063 Sum_probs=0.0
Q ss_pred CcEEEEec------CcEEEeeCCCCeEEEECCCCCCCCCcccCCCceeecccccccccccccCcEEEEE---------cC
Q 048136 233 GNLYIFAN------NRSILLDPRANYVLREYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLIC---------GG 297 (559)
Q Consensus 233 G~iyv~Gg------~~~e~yDp~t~~W~~~~p~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~---------GG 297 (559)
.++|+.-. ..+.++|+.+++....++ -.... .+.+..+ ..++|++ |.
T Consensus 85 ~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~--------vG~~P-gia~SpD---------gk~lyVan~~~~~~~~G~ 146 (426)
T 3c75_H 85 RRVYIQDPAHFAAITQQFVIDGSTGRILGMTD--------GGFLP-HPVAAED---------GSFFAQASTVFERIARGK 146 (426)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTTEEEEEEE--------ECSSC-EEEECTT---------SSCEEEEEEEEEETTEEE
T ss_pred CEEEEECCCcCCCCCeEEEEECCCCEEEEEEE--------CCCCC-ceEECCC---------CCEEEEEeccccccccCC
Q ss_pred CCCccccccccccccccccCceEEEEecCCCCceeee-cCC------CCcccccEEEeeCCeEEEEcCcCCCCCCccCCC
Q 048136 298 SVPEAFYFGEVEKRLVPALDDCARMVVTSPDPVWTTE-KMP------TPRVMSDGVLLPTGDVLLINGAELGSAGWKDAD 370 (559)
Q Consensus 298 ~~~~~~~~~~~~~~~~~a~~s~~~~d~~~~~~~W~~~-~M~------~~R~~~~av~LpdG~V~vvGG~~~g~~g~~~~~ 370 (559)
.. +.+..||+.. .+-... +++ ....-+...+-|||+-+.+....
T Consensus 147 ~~-----------------~~VsviD~~t--~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~---------- 197 (426)
T 3c75_H 147 RT-----------------DYVEVFDPVT--FLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS---------- 197 (426)
T ss_dssp EE-----------------EEEEEECTTT--CCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS----------
T ss_pred CC-----------------CEEEEEECCC--CcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC----------
Q ss_pred CCCcccEEEeCCCCCCCeEEecCCCCCCccceee-------eEECCCCceEEe
Q 048136 371 KPCFKPLLYKPSKPPGSRFTELAPSDIPRMYHSV-------ANLLPDGRVFVG 416 (559)
Q Consensus 371 ~~~~~~e~YDP~t~~g~~Wt~~~~~~~~R~yhs~-------a~llpdG~Vlv~ 416 (559)
+..++.++|.++. +.+...+.+...+-. ..+.+||+++++
T Consensus 198 -~~~~VsVID~~t~-----kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V 244 (426)
T 3c75_H 198 -PAPAVGVVDLEGK-----TFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARV 244 (426)
T ss_dssp -SSCEEEEEETTTT-----EEEEEEECCSEEEEEEEETTEEEEEETTSSEEEE
T ss_pred -CCCeEEEEECCCC-----eEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEE
No 257
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=25.20 E-value=76 Score=33.37 Aligned_cols=88 Identities=8% Similarity=-0.006 Sum_probs=54.5
Q ss_pred eEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCccccccccceEE------
Q 048136 102 SVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTALKDGRWYATQA------ 175 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~------ 175 (559)
..++|+.+++++.+... .......+..+||+.++.+.. ++...++++|.. +.+...+.. . .......+
T Consensus 177 i~~~d~~~g~~~~l~~~-~~~~~~~~~SpDG~~l~~~~~-~~~~~i~~~d~~-~~~~~~~~~-~--~~~~~~~~~~~~~~ 250 (582)
T 3o4h_A 177 LFTSNLSSGGLRVFDSG-EGSFSSASISPGMKVTAGLET-AREARLVTVDPR-DGSVEDLEL-P--SKDFSSYRPTAITW 250 (582)
T ss_dssp EEEEETTTCCCEEECCS-SCEEEEEEECTTSCEEEEEEC-SSCEEEEEECTT-TCCEEECCC-S--CSHHHHHCCSEEEE
T ss_pred EEEEcCCCCCceEeecC-CCccccceECCCCCEEEEccC-CCeeEEEEEcCC-CCcEEEccC-C--CcChhhhhhccccc
Confidence 56789888888876432 222344567789998885433 444689999998 777663221 1 11111122
Q ss_pred --EccCCcEEEEcCCCCCceeEE
Q 048136 176 --LLADGSFLIFGGRDSFSYEYI 196 (559)
Q Consensus 176 --~L~dG~VyvvGG~~~~s~E~y 196 (559)
.-+||++++.+..++ ...+|
T Consensus 251 ~~~spdg~~~~~~~~~g-~~~l~ 272 (582)
T 3o4h_A 251 LGYLPDGRLAVVARREG-RSAVF 272 (582)
T ss_dssp EEECTTSCEEEEEEETT-EEEEE
T ss_pred eeEcCCCcEEEEEEcCC-cEEEE
Confidence 457998888876554 45666
No 258
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=24.26 E-value=2.2e+02 Score=30.32 Aligned_cols=76 Identities=7% Similarity=-0.132 Sum_probs=42.2
Q ss_pred eeeEEEeCCCCC--EEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCC--eecCCCccccccccceEE
Q 048136 100 CHSVFYNVNTLQ--VTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCD--WTEYPTALKDGRWYATQA 175 (559)
Q Consensus 100 ~~~~~yDp~t~~--w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~--W~~~~~~m~~~R~y~s~~ 175 (559)
.....+|+.|++ |+.-.. .....+..+..+|.||+ |.. + ..++.||.. +.+ |+.- +...-...-++
T Consensus 466 G~l~A~D~~tG~~~W~~~~~--~~~~~g~~~tagglvf~-g~~-d--g~l~A~D~~-tG~~lW~~~---~~~g~~a~P~~ 535 (582)
T 1flg_A 466 GSLRAMDPVSGKVVWEHKEH--LPLWAGVLATAGNLVFT-GTG-D--GYFKAFDAK-SGKELWKFQ---TGSGIVSPPIT 535 (582)
T ss_dssp EEEEEECTTTCCEEEEEEES--SCCCSCCEEETTTEEEE-ECT-T--SEEEEEETT-TCCEEEEEE---CSSCCCSCCEE
T ss_pred ceEEEEECCCCCEEEEecCC--CCCcccceEeCCCEEEE-ECC-C--CcEEEEECC-CCCEEEEec---CCCCcccCceE
Confidence 446778999886 654221 12223344555666666 433 3 478899987 554 7642 22222111122
Q ss_pred EccCCcEEEE
Q 048136 176 LLADGSFLIF 185 (559)
Q Consensus 176 ~L~dG~Vyvv 185 (559)
.-.||++||+
T Consensus 536 y~~~G~qYv~ 545 (582)
T 1flg_A 536 WEQDGEQYLG 545 (582)
T ss_dssp EEETTEEEEE
T ss_pred EEECCEEEEE
Confidence 2249999987
No 259
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=23.64 E-value=7e+02 Score=26.73 Aligned_cols=124 Identities=7% Similarity=0.034 Sum_probs=61.1
Q ss_pred eEEEeCCCCCE--------EeCc---cCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCC----eecCCCccc
Q 048136 102 SVFYNVNTLQV--------TPLK---VITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCD----WTEYPTALK 166 (559)
Q Consensus 102 ~~~yDp~t~~w--------~~~~---~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~----W~~~~~~m~ 166 (559)
+.+||..++.- ..+. .-+..+....+..+|| +++++. | +.+++||.. .+. |..+. .
T Consensus 153 VkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~-D--~tVrlWd~~-~~~~~~~~~tL~---~ 223 (588)
T 2j04_A 153 LQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALS-N--NSVFSMTVS-ASSHQPVSRMIQ---N 223 (588)
T ss_dssp EEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEET-T--CCEEEECCC-SSSSCCCEEEEE---C
T ss_pred EEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeC-C--CeEEEEECC-CCccccceeeec---c
Confidence 78999988742 2221 1122233344566788 555554 2 689999987 544 22221 1
Q ss_pred cccccceEEEccCCcEEEEcCCCCCceeEE-cCCCCCCCcceeccccccccccccCCccceEEE--eeCCcEEEEecCcE
Q 048136 167 DGRWYATQALLADGSFLIFGGRDSFSYEYI-PAERTENAYSIPFQFLRDTYDVLENNLYPFVYL--VPDGNLYIFANNRS 243 (559)
Q Consensus 167 ~~R~y~s~~~L~dG~VyvvGG~~~~s~E~y-P~~~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~--l~~G~iyv~Gg~~~ 243 (559)
..|..-..+... |..+++++. .++.+| ...+ ....... ... ...-.+.. .+||++.+++..+.
T Consensus 224 ~h~~~V~svaFs-g~~LASa~~--~tIkLWd~~~~----~~~~~~~--gh~-----~~V~~va~~~s~d~~~La~a~edG 289 (588)
T 2j04_A 224 ASRRKITDLKIV-DYKVVLTCP--GYVHKIDLKNY----SISSLKT--GSL-----ENFHIIPLNHEKESTILLMSNKTS 289 (588)
T ss_dssp CCSSCCCCEEEE-TTEEEEECS--SEEEEEETTTT----EEEEEEC--SCC-----SCCCEEEETTCSSCEEEEECSSCE
T ss_pred cccCcEEEEEEE-CCEEEEEeC--CeEEEEECCCC----eEEEEEc--CCC-----ceEEEEEeeeCCCCCEEEEEcCCC
Confidence 223222222333 566666663 467777 4432 1111111 110 11122344 56888888887543
Q ss_pred E-EeeC
Q 048136 244 I-LLDP 248 (559)
Q Consensus 244 e-~yDp 248 (559)
. +|..
T Consensus 290 ~klw~~ 295 (588)
T 2j04_A 290 YKVLLE 295 (588)
T ss_dssp EEEEES
T ss_pred CEEEee
Confidence 3 4443
No 260
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=23.14 E-value=2.3e+02 Score=30.51 Aligned_cols=76 Identities=12% Similarity=0.019 Sum_probs=42.0
Q ss_pred eeeEEEeCCCCC--EEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCC--eecCCCccccccccceEE
Q 048136 100 CHSVFYNVNTLQ--VTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCD--WTEYPTALKDGRWYATQA 175 (559)
Q Consensus 100 ~~~~~yDp~t~~--w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~--W~~~~~~m~~~R~y~s~~ 175 (559)
.....+|+.|++ |+.-... ...++..+..+|.||+ |.. + ..++.||.. +.+ |+.- +...-...-++
T Consensus 453 G~l~A~D~~tG~~~W~~~~~~--~~~~g~~~tagg~vf~-gt~-d--g~l~A~D~~-tG~~lW~~~---l~~g~~~~P~~ 522 (599)
T 1w6s_A 453 GQIKAYNAITGDYKWEKMERF--AVWGGTMATAGDLVFY-GTL-D--GYLKARDSD-TGDLLWKFK---IPSGAIGYPMT 522 (599)
T ss_dssp EEEEEECTTTCCEEEEEEESS--CCCSBCEEETTTEEEE-ECT-T--SEEEEEETT-TCCEEEEEE---CSSCCCSCCEE
T ss_pred CeEEEEECCCCCEEeEecCCC--CccCcceEecCCEEEE-ECC-C--CeEEEEECC-CCCEEEEee---CCCCcEeccEE
Confidence 456788999886 6642211 1222334455666666 432 3 478999998 554 7642 33222211122
Q ss_pred EccCCcEEEE
Q 048136 176 LLADGSFLIF 185 (559)
Q Consensus 176 ~L~dG~Vyvv 185 (559)
...||++||+
T Consensus 523 y~~~G~qyv~ 532 (599)
T 1w6s_A 523 YTHKGTQYVA 532 (599)
T ss_dssp EEETTEEEEE
T ss_pred EEeCCEEEEE
Confidence 2249999986
No 261
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=22.56 E-value=2.1e+02 Score=27.00 Aligned_cols=100 Identities=13% Similarity=0.259 Sum_probs=55.8
Q ss_pred eecCCCcEEEEcCCCCCCCeEEEEeCCC--CCCeecCCCccccccc--cceEEEccCCcEEEEcCCCCCceeEE---cCC
Q 048136 127 GLDVNGNLISTGGFLGGSRTTRYLWGCP--TCDWTEYPTALKDGRW--YATQALLADGSFLIFGGRDSFSYEYI---PAE 199 (559)
Q Consensus 127 ~~l~dG~i~v~GG~~~g~~~v~~ydp~~--t~~W~~~~~~m~~~R~--y~s~~~L~dG~VyvvGG~~~~s~E~y---P~~ 199 (559)
++-+||.||++ . + ...+..+|.+ ...|......+-..=| .-++..-++|.+|++ .++ ++| |.+
T Consensus 47 af~P~G~LYaV--~-~--G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG---~iyr~~pP~ 116 (236)
T 1tl2_A 47 FLSPGGELYGV--L-N--DKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKD---KLYKASPPQ 116 (236)
T ss_dssp EECTTSCEEEE--E-T--TEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETT---EEEEESCCC
T ss_pred EECCCccEEEE--e-C--CeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCC---EEEEeCCCc
Confidence 34569999999 2 2 3678888852 3457664321211111 234445568999998 333 344 333
Q ss_pred CCCCCcceeccccccccccccCCccceEEEeeCCcEEEEec
Q 048136 200 RTENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN 240 (559)
Q Consensus 200 ~~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg 240 (559)
+....|.......-+. .+..+++++..++|.||++.+
T Consensus 117 ~~~~~Wl~~a~~vg~~----gw~~~~~lff~p~G~Lyav~d 153 (236)
T 1tl2_A 117 SDTDNWIARATEVGSG----GWSGFKFLFFHPNGYLYAVHG 153 (236)
T ss_dssp STTCCHHHHSEEEECS----SGGGEEEEEECTTSCEEEEET
T ss_pred CCCCceeccccEeccC----CCCceEEEEECCCceEEEEeC
Confidence 2224564433322110 123467778888999999873
No 262
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=21.52 E-value=1.7e+02 Score=28.68 Aligned_cols=73 Identities=14% Similarity=-0.097 Sum_probs=41.8
Q ss_pred eeEEEeCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCCCCeEEEEeCCCCCCeecCCCcc-ccccccceEEEccC
Q 048136 101 HSVFYNVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGGSRTTRYLWGCPTCDWTEYPTAL-KDGRWYATQALLAD 179 (559)
Q Consensus 101 ~~~~yDp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~ydp~~t~~W~~~~~~m-~~~R~y~s~~~L~d 179 (559)
.+..||.++++-...-.... ..+.++.+||+.+.+.+. +++.+||.. +.+-+.+.. + ..++.-...+.-+|
T Consensus 287 ~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~----~~v~v~D~~-t~~l~~~~~-i~~~G~~P~~~~~~p~ 358 (361)
T 2oiz_A 287 EIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG----GNVNVYDIS-QPEPKLLRT-IEGAAEASLQVQFHPV 358 (361)
T ss_dssp EEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS----SCEEEEECS-SSSCEEEEE-ETTSCSSEEEEEECCC
T ss_pred eEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC----CeEEEEECC-CCcceeeEE-eccCCCCcEEEEecCC
Confidence 47789998887543222222 555667789986555542 689999987 651133322 2 23343334555666
Q ss_pred Cc
Q 048136 180 GS 181 (559)
Q Consensus 180 G~ 181 (559)
|+
T Consensus 359 G~ 360 (361)
T 2oiz_A 359 GG 360 (361)
T ss_dssp SC
T ss_pred CC
Confidence 64
No 263
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=21.33 E-value=4.6e+02 Score=25.15 Aligned_cols=54 Identities=7% Similarity=-0.233 Sum_probs=28.1
Q ss_pred eEEEeCC-CCCEEeCccC---C-CcccccCeecCCCcEEEEcCCCCCCCeEEEE--eCCCCCCe
Q 048136 102 SVFYNVN-TLQVTPLKVI---T-DTWCSSGGLDVNGNLISTGGFLGGSRTTRYL--WGCPTCDW 158 (559)
Q Consensus 102 ~~~yDp~-t~~w~~~~~~---~-~~~c~~~~~l~dG~i~v~GG~~~g~~~v~~y--dp~~t~~W 158 (559)
..+||.. +++.+.+... . ...-.+.++.+||+.+.+.... ...+.+| |+. +.+.
T Consensus 169 v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~--~~~v~v~~~~~~-~g~~ 229 (365)
T 1jof_A 169 LWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEA--GNRICEYVIDPA-THMP 229 (365)
T ss_dssp EEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETT--TTEEEEEEECTT-TCCE
T ss_pred EEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECC--CCeEEEEEEeCC-CCcE
Confidence 6778887 7776543221 1 1112234567899755554432 2456665 454 4443
No 264
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=20.89 E-value=1.1e+02 Score=29.62 Aligned_cols=80 Identities=15% Similarity=0.121 Sum_probs=45.7
Q ss_pred eEEEeCCCCCEEeCccCC-CcccccCeecCCCcEEEEcCCCCCCC--eEEEEeCCCCCCeecCCCccccccccceEEEcc
Q 048136 102 SVFYNVNTLQVTPLKVIT-DTWCSSGGLDVNGNLISTGGFLGGSR--TTRYLWGCPTCDWTEYPTALKDGRWYATQALLA 178 (559)
Q Consensus 102 ~~~yDp~t~~w~~~~~~~-~~~c~~~~~l~dG~i~v~GG~~~g~~--~v~~ydp~~t~~W~~~~~~m~~~R~y~s~~~L~ 178 (559)
...+|..+++++.+.... ...+......+||+.+++.....+.. .+++||.. +.+...+.. +. .+. .+..+
T Consensus 218 l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~-~g~~~~l~~-~~--~~~--~~~s~ 291 (396)
T 3c5m_A 218 MWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPE-TLENEEVMV-MP--PCS--HLMSN 291 (396)
T ss_dssp CEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTT-TCCEEEEEE-CC--SEE--EEEEC
T ss_pred EEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECC-CCCeEEeee-CC--CCC--CCccC
Confidence 467888777777765421 11223345667998655554322333 49999988 666554432 22 222 34446
Q ss_pred -CCcEEEEcC
Q 048136 179 -DGSFLIFGG 187 (559)
Q Consensus 179 -dG~VyvvGG 187 (559)
||++++..+
T Consensus 292 ~dg~~l~~~~ 301 (396)
T 3c5m_A 292 FDGSLMVGDG 301 (396)
T ss_dssp SSSSEEEEEE
T ss_pred CCCceEEEec
Confidence 888777654
No 265
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=20.66 E-value=7.9e+02 Score=26.19 Aligned_cols=282 Identities=10% Similarity=0.056 Sum_probs=0.0
Q ss_pred CCCCCcEE------ecCCCCCcceeEEEeecCCCeEEEEecccccccCCCCCCCCCCCCccccccccccCCccceeeEEE
Q 048136 32 PYFLGKWE------LLPNNPGISAMHSVLLPNVDEMVIFDATVWQISRLPLPDYKRPCPMHQNKATNVTNIDCWCHSVFY 105 (559)
Q Consensus 32 ~~~~g~W~------~~~~~~~~~~~h~~~~~~~gkv~~~gg~~~~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~y 105 (559)
+...|.|+ .+.......-...... ++|+.+++.....|..... ..++
T Consensus 104 ~~~~~~~~~lld~~~l~~~~~~~~~~~~~S-PDg~~la~~~~~~G~~~~~--------------------------i~v~ 156 (710)
T 2xdw_A 104 DSLEGEARVFLDPNILSDDGTVALRGYAFS-EDGEYFAYGLSASGSDWVT--------------------------IKFM 156 (710)
T ss_dssp SSTTSCCEEEECGGGGCTTSCEEEEEEEEC-TTSSEEEEEEEETTCSCEE--------------------------EEEE
T ss_pred cCCCCCcEEEECHHHhccCCCEEEEEEEEC-CCCCEEEEEEcCCCCceEE--------------------------EEEE
Q ss_pred eCCCCCEEeCccCCCcccccCeecCCCcEEEEcCCCCC-------------CCeEEEEeCCCCCCee--cCCCccccccc
Q 048136 106 NVNTLQVTPLKVITDTWCSSGGLDVNGNLISTGGFLGG-------------SRTTRYLWGCPTCDWT--EYPTALKDGRW 170 (559)
Q Consensus 106 Dp~t~~w~~~~~~~~~~c~~~~~l~dG~i~v~GG~~~g-------------~~~v~~ydp~~t~~W~--~~~~~m~~~R~ 170 (559)
|..+++..+....... ....+..+||+.++++..... ...+++++.. +.+.. .+-..-..+.+
T Consensus 157 d~~tg~~~~~~~~~~~-~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~-t~~~~~~~v~~~~~~~~~ 234 (710)
T 2xdw_A 157 KVDGAKELPDVLERVK-FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLG-TDQSEDILCAEFPDEPKW 234 (710)
T ss_dssp ETTTTEEEEEEEEEEC-SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETT-SCGGGCEEEECCTTCTTC
T ss_pred ECCCCCCCcccccCcc-cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECC-CCcccceEEeccCCCCeE
Q ss_pred cceEEEccCCcEEEEcCCCCC--ceeEE--cCCC------CCCCcceeccccccccccccCCccceEEEeeCCcEEEEec
Q 048136 171 YATQALLADGSFLIFGGRDSF--SYEYI--PAER------TENAYSIPFQFLRDTYDVLENNLYPFVYLVPDGNLYIFAN 240 (559)
Q Consensus 171 y~s~~~L~dG~VyvvGG~~~~--s~E~y--P~~~------~~~~w~~~~p~l~~~~d~~~~~~yp~~~~l~~G~iyv~Gg 240 (559)
..+...-+||+.+++...... ..++| .... ....+..+.+-.... .....++|+.+++..
T Consensus 235 ~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~----------~~~~s~dg~~l~~~s 304 (710)
T 2xdw_A 235 MGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGE----------YDYVTNEGTVFTFKT 304 (710)
T ss_dssp EEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSC----------EEEEEEETTEEEEEE
T ss_pred EEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcE----------EEEEeccCCEEEEEE
Q ss_pred C------cEEEeeCCCC---eEEEECCCCCCCCCcccCCCceeecccccccccccccCcEEEEEcCCCCccccccccccc
Q 048136 241 N------RSILLDPRAN---YVLREYPPLPGGARNYPSTSTSVLLPLKLYRDYYARVDAEVLICGGSVPEAFYFGEVEKR 311 (559)
Q Consensus 241 ~------~~e~yDp~t~---~W~~~~p~mp~~~~~~p~~g~~v~lpl~~~~~~~~~~~gkI~v~GG~~~~~~~~~~~~~~ 311 (559)
+ .+.++|..+. .|...++..+..... .....+ ++++++....+
T Consensus 305 ~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~-----------~~~lv~~~~~~------------ 356 (710)
T 2xdw_A 305 NRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLE-----WVACVR-----------SNFLVLCYLHD------------ 356 (710)
T ss_dssp CTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEE-----EEEEET-----------TTEEEEEEEET------------
T ss_pred CCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEE-----EEEEEc-----------CCEEEEEEEEC------------
Q ss_pred cccccCceEEEEecCCCCceeee-cCCCCcccccEEEeeCCeEEEEcCcCCCCCCccCCCCCCcccEEEeCCCCCCCe--
Q 048136 312 LVPALDDCARMVVTSPDPVWTTE-KMPTPRVMSDGVLLPTGDVLLINGAELGSAGWKDADKPCFKPLLYKPSKPPGSR-- 388 (559)
Q Consensus 312 ~~~a~~s~~~~d~~~~~~~W~~~-~M~~~R~~~~av~LpdG~V~vvGG~~~g~~g~~~~~~~~~~~e~YDP~t~~g~~-- 388 (559)
....+.++|+.+ .+-... ..+...... ...-+|++.+++...+....+ ++.+||..+. +
T Consensus 357 ---g~~~l~~~~~~~--g~~~~~l~~~~~~v~~-~~~s~d~~~l~~~~ss~~~P~---------~i~~~d~~tg---~~~ 418 (710)
T 2xdw_A 357 ---VKNTLQLHDLAT--GALLKIFPLEVGSVVG-YSGQKKDTEIFYQFTSFLSPG---------IIYHCDLTKE---ELE 418 (710)
T ss_dssp ---TEEEEEEEETTT--CCEEEEECCCSSEEEE-EECCTTCSEEEEEEECSSCCC---------EEEEEETTSS---SCC
T ss_pred ---CEEEEEEEECCC--CCEEEecCCCCceEEE-EecCCCCCEEEEEEeCCCCCC---------EEEEEECCCC---ccc
Q ss_pred EEecCCCCCC
Q 048136 389 FTELAPSDIP 398 (559)
Q Consensus 389 Wt~~~~~~~~ 398 (559)
.+.+.....+
T Consensus 419 ~~~l~~~~~~ 428 (710)
T 2xdw_A 419 PRVFREVTVK 428 (710)
T ss_dssp CEEEEECCCT
T ss_pred eEEeeecccC
Done!